AmiGO: BLAST Results


BLAST match view associations BLAST with emb1138 emb1138 emb1138 AT5G26742	protein from Arabidopsis thaliana	1.3e-167
BLAST match view associations BLAST with PMH2 PMH2 PMH2 putative mitochondrial RNA helicase 2	protein from Arabidopsis thaliana	1.6e-63
BLAST match view associations BLAST with PMH1 PMH1 PMH1 putative mitochondrial RNA helicase 1	protein from Arabidopsis thaliana	3.8e-62
BLAST match view associations BLAST with ddx21 ddx21 ddx21 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	gene_product from Danio rerio	1.2e-56
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Bos taurus	5.3e-56
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Canis lupus familiaris	5.3e-56
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Canis lupus familiaris	5.3e-56
BLAST match view associations BLAST with DDX50 DDX50 DDX50 ATP-dependent RNA helicase DDX50	protein from Homo sapiens	1.1e-55
BLAST match view associations BLAST with Ddx50 Ddx50 Ddx50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50	protein from Mus musculus	1.1e-55
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Sus scrofa	2.6e-54
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Gallus gallus	4.3e-54
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Canis lupus familiaris	1.5e-53
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Canis lupus familiaris	1.5e-53
BLAST match view associations BLAST with DDX21 DDX21 DDX21 DDX21 protein	protein from Bos taurus	4.4e-53
BLAST match view associations BLAST with Ddx21 Ddx21 Ddx21 DEAD (Asp-Glu-Ala-Asp) box helicase 21	gene from Rattus norvegicus	5.5e-53
BLAST match view associations BLAST with Ddx21 Ddx21 Ddx21 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	protein from Mus musculus	5.6e-53
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Nucleolar RNA helicase 2	protein from Homo sapiens	9.8e-53
BLAST match view associations BLAST with PRH75 PRH75 PRH75	protein from Arabidopsis thaliana	3.5e-52
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Sus scrofa	1.3e-51
BLAST match view associations BLAST with Ddx50 Ddx50 Ddx50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50	gene from Rattus norvegicus	4.2e-47
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Gallus gallus	5.6e-45
BLAST match view associations BLAST with PFE0215w PFE0215w PFE0215w ATP-dependent helicase, putative	gene from Plasmodium falciparum	1.5e-43
BLAST match view associations BLAST with PFE0215w PFE0215w PFE0215w ATP-dependent helicase, putative	protein from Plasmodium falciparum 3D7	1.5e-43
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Geobacillus kaustophilus HTA426	2.1e-36
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus cereus ATCC 10987	1.2e-35
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus thuringiensis str. Al Hakam	3.1e-35
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus cereus E33L	3.1e-35
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus thuringiensis serovar konkukian str. 97-27	3.1e-35
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus cereus ATCC 14579	3.1e-35
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus anthracis	3.1e-35
BLAST match view associations BLAST with BA_0247 BA_0247 BA_0247 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis str. Ames	3.1e-35
BLAST match view associations BLAST with deaD deaD deaD Cold-shock DEAD box protein A	protein from Pseudomonas protegens Pf-5	4.5e-34
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus licheniformis DSM 13 = ATCC 14580	7.4e-34
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus subtilis subsp. subtilis str. 168	9.5e-34
BLAST match view associations BLAST with CHY_0229 CHY_0229 CHY_0229 ATP-dependent RNA helicase, DEAD box family	protein from Carboxydothermus hydrogenoformans Z-2901	3.2e-33
BLAST match view associations BLAST with CHY_0229 CHY_0229 CHY_0229 ATP-dependent RNA helicase, DEAD box family	protein from Carboxydothermus hydrogenoformans Z-2901	3.2e-33
BLAST match view associations BLAST with SO_4034 SO_4034 SO_4034 ATP-dependent RNA helicase DeaD	protein from Shewanella oneidensis MR-1	3.6e-33
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Gallus gallus	2.9e-32
BLAST match view associations BLAST with VC_A0804 VC_A0804 VC_A0804 ATP-dependent RNA helicase DeaD	protein from Vibrio cholerae O1 biovar El Tor str. N16961	1.6e-31
BLAST match view associations BLAST with VC_A0804 VC_A0804 VC_A0804 ATP-dependent RNA helicase DeaD	protein from Vibrio cholerae O1 biovar El Tor	1.6e-31
BLAST match view associations BLAST with DED1 DED1 DED1 ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase	gene from Saccharomyces cerevisiae	6.3e-30
BLAST match view associations BLAST with DBP1 DBP1 DBP1 Putative ATP-dependent RNA helicase of the DEAD-box protein family	gene from Saccharomyces cerevisiae	1.1e-29
BLAST match view associations BLAST with deaD deaD deaD Cold-shock DEAD box protein A homolog	protein from Mycobacterium tuberculosis	1.6e-29
BLAST match view associations BLAST with RRP3 RRP3 RRP3 Protein involved in rRNA processing	gene from Saccharomyces cerevisiae	1.7e-29
BLAST match view associations BLAST with BAS5307 BAS5307 BAS5307 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis	1.8e-29
BLAST match view associations BLAST with BA_5703 BA_5703 BA_5703 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis str. Ames	1.8e-29
BLAST match view associations BLAST with SPO_1443 SPO_1443 SPO_1443 ATP-dependent RNA helicase RhlE	protein from Ruegeria pomeroyi DSS-3	2.1e-29
BLAST match view associations BLAST with orf19.7392 orf19.7392 orf19.7392	gene_product from Candida albicans	3.2e-29
BLAST match view associations BLAST with CPS_1590 CPS_1590 CPS_1590 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	4.4e-29
BLAST match view associations BLAST with AT5G14610 AT5G14610 AT5G14610	protein from Arabidopsis thaliana	6.3e-29
BLAST match view associations BLAST with DRH1 DRH1 DRH1 DEAD box RNA helicase 1	protein from Arabidopsis thaliana	6.7e-29
BLAST match view associations BLAST with CPS_1726 CPS_1726 CPS_1726 RNA helicase DeaD	protein from Colwellia psychrerythraea 34H	8.2e-29
BLAST match view associations BLAST with AT3G58510 AT3G58510 AT3G58510	protein from Arabidopsis thaliana	3.8e-28
BLAST match view associations BLAST with BAS2301 BAS2301 BAS2301 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis	3.9e-28
BLAST match view associations BLAST with BA_2475 BA_2475 BA_2475 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis str. Ames	3.9e-28
BLAST match view associations BLAST with SO_1383 SO_1383 SO_1383 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	6.4e-28
BLAST match view associations BLAST with orf19.7546 orf19.7546 orf19.7546	gene_product from Candida albicans	1.3e-27
BLAST match view associations BLAST with VC_2564 VC_2564 VC_2564 ATP-dependent RNA helicase DbpA	protein from Vibrio cholerae O1 biovar El Tor	1.7e-27
BLAST match view associations BLAST with RH20 RH20 RH20 RNA helicase 20	protein from Arabidopsis thaliana	1.9e-27
BLAST match view associations BLAST with GSU_0914 GSU_0914 GSU_0914 ATP-dependent RNA helicase RhlE	protein from Geobacter sulfurreducens PCA	2.2e-27
BLAST match view associations BLAST with AT3G06480 AT3G06480 AT3G06480	protein from Arabidopsis thaliana	2.9e-27
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Sus scrofa	3.5e-27
BLAST match view associations BLAST with dbpA dbpA dbpA ATP-dependent RNA helicase DbpA	protein from Colwellia psychrerythraea 34H	4.2e-27
BLAST match view associations BLAST with CPS_1540 CPS_1540 CPS_1540 ATP-dependent RNA helicase DbpA	protein from Colwellia psychrerythraea 34H	4.2e-27
BLAST match view associations BLAST with TIF1 TIF1 TIF1 ATP-dependent RNA helicase eIF4A	protein from Magnaporthe oryzae 70-15	4.5e-27
BLAST match view associations BLAST with inf-1 inf-1 inf-1	gene from Caenorhabditis elegans	4.5e-27
BLAST match view associations BLAST with AT5G63120 AT5G63120 AT5G63120	protein from Arabidopsis thaliana	5.3e-27
BLAST match view associations BLAST with rhlE rhlE rhlE ATP-dependent RNA helicase	protein from Escherichia coli K-12	5.5e-27
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Bos taurus	5.9e-27
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Canis lupus familiaris	5.9e-27
BLAST match view associations BLAST with DDX3X DDX3X DDX3X ATP-dependent RNA helicase DDX3X	protein from Homo sapiens	5.9e-27
BLAST match view associations BLAST with PSPPH_0449 PSPPH_0449 PSPPH_0449 ATP-dependent RNA helicase RhlE, putative	protein from Pseudomonas syringae pv. phaseolicola 1448A	6.4e-27
BLAST match view associations BLAST with RVBD_3211 RVBD_3211 RVBD_3211 ATP-dependent RNA helicase rhlE	protein from Mycobacterium tuberculosis H37Rv	7.1e-27
BLAST match view associations BLAST with deaD deaD deaD DeaD, DEAD-box RNA helicase	protein from Escherichia coli K-12	8.4e-27
BLAST match view associations BLAST with GSU_0491 GSU_0491 GSU_0491 ATP-dependent RNA helicase RhlE	protein from Geobacter sulfurreducens PCA	8.8e-27
BLAST match view associations BLAST with rhlE rhlE rhlE ATP-dependent RNA helicase RhlE	protein from Hyphomonas neptunium ATCC 15444	9.1e-27
BLAST match view associations BLAST with DDX3Y DDX3Y DDX3Y cDNA FLJ53122, highly similar to ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-)	protein from Homo sapiens	9.4e-27
BLAST match view associations BLAST with BA_4509 BA_4509 BA_4509 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis str. Ames	9.4e-27
BLAST match view associations BLAST with Ddx3y Ddx3y Ddx3y DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked	protein from Mus musculus	9.5e-27
BLAST match view associations BLAST with Ddx3x Ddx3x Ddx3x DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	protein from Mus musculus	9.7e-27
BLAST match view associations BLAST with Ddx3x Ddx3x Ddx3x DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	gene from Rattus norvegicus	9.7e-27
BLAST match view associations BLAST with I3LHW0 I3LHW0 I3LHW0 Uncharacterized protein	protein from Sus scrofa	1.0e-26
BLAST match view associations BLAST with LOC100524536 LOC100524536 LOC100524536 Uncharacterized protein	protein from Sus scrofa	1.1e-26
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Gallus gallus	1.1e-26
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Gallus gallus	1.1e-26
BLAST match view associations BLAST with DBP3 DBP3 DBP3 RNA-Dependent ATPase, member of DExD/H-box family	gene from Saccharomyces cerevisiae	1.2e-26
BLAST match view associations BLAST with EIF4A3 EIF4A3 EIF4A3 Eukaryotic initiation factor 4A-III	protein from Gallus gallus	1.2e-26
BLAST match view associations BLAST with EIF4A3 EIF4A3 EIF4A3 Eukaryotic initiation factor 4A-III	protein from Gallus gallus	1.2e-26
BLAST match view associations BLAST with EIF4A3 EIF4A3 EIF4A3 Eukaryotic initiation factor 4A-III	protein from Bos taurus	1.2e-26
BLAST match view associations BLAST with EIF4A3 EIF4A3 EIF4A3 Uncharacterized protein	protein from Canis lupus familiaris	1.2e-26
BLAST match view associations BLAST with EIF4A3 EIF4A3 EIF4A3 Eukaryotic initiation factor 4A-III	protein from Homo sapiens	1.2e-26
BLAST match view associations BLAST with EIF4A3 EIF4A3 EIF4A3 Eukaryotic initiation factor 4A-III	protein from Sus scrofa	1.2e-26
BLAST match view associations BLAST with EIF4A3 EIF4A3 EIF4A3 Eukaryotic initiation factor 4A-III	protein from Sus scrofa	1.2e-26
BLAST match view associations BLAST with Eif4a3 Eif4a3 Eif4a3 eukaryotic translation initiation factor 4A, isoform 3	gene from Rattus norvegicus	1.2e-26
BLAST match view associations BLAST with AT1G72730 AT1G72730 AT1G72730	protein from Arabidopsis thaliana	1.2e-26
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  012133
        (470 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:504955106 - symbol:emb1138 "embryo defective 1...  1560  1.3e-167  2
TAIR|locus:2087852 - symbol:PMH2 "putative mitochondrial ...   648  1.6e-63   1
TAIR|locus:2087832 - symbol:PMH1 "putative mitochondrial ...   635  3.8e-62   1
ZFIN|ZDB-GENE-031113-10 - symbol:ddx21 "DEAD (Asp-Glu-Ala...   583  1.2e-56   1
UNIPROTKB|F1MMK3 - symbol:DDX50 "Uncharacterized protein"...   577  5.3e-56   1
UNIPROTKB|E2QTT0 - symbol:DDX50 "Uncharacterized protein"...   577  5.3e-56   1
UNIPROTKB|E2RPT4 - symbol:DDX50 "Uncharacterized protein"...   577  5.3e-56   1
UNIPROTKB|Q9BQ39 - symbol:DDX50 "ATP-dependent RNA helica...   574  1.1e-55   1
MGI|MGI:2182303 - symbol:Ddx50 "DEAD (Asp-Glu-Ala-Asp) bo...   574  1.1e-55   1
UNIPROTKB|F1SUG8 - symbol:DDX50 "Uncharacterized protein"...   561  2.6e-54   1
UNIPROTKB|E1BW15 - symbol:DDX50 "Uncharacterized protein"...   559  4.3e-54   1
UNIPROTKB|E2QTL6 - symbol:DDX21 "Uncharacterized protein"...   554  1.5e-53   1
UNIPROTKB|F6V8G4 - symbol:DDX21 "Uncharacterized protein"...   554  1.5e-53   1
UNIPROTKB|A4FV23 - symbol:DDX21 "DDX21 protein" species:9...   550  4.4e-53   1
RGD|1307306 - symbol:Ddx21 "DEAD (Asp-Glu-Ala-Asp) box he...   549  5.5e-53   1
MGI|MGI:1860494 - symbol:Ddx21 "DEAD (Asp-Glu-Ala-Asp) bo...   553  5.6e-53   1
UNIPROTKB|Q9NR30 - symbol:DDX21 "Nucleolar RNA helicase 2...   547  9.8e-53   1
UNIPROTKB|F1LX16 - symbol:F1LX16 "Uncharacterized protein...   542  2.7e-52   1
TAIR|locus:2167903 - symbol:PRH75 species:3702 "Arabidops...   541  3.5e-52   1
UNIPROTKB|F1SUG7 - symbol:DDX21 "Uncharacterized protein"...   541  1.3e-51   1
RGD|1310934 - symbol:Ddx50 "DEAD (Asp-Glu-Ala-Asp) box po...   493  4.2e-47   1
UNIPROTKB|E1C6M6 - symbol:DDX21 "Uncharacterized protein"...   473  5.6e-45   1
GENEDB_PFALCIPARUM|PFE0215w - symbol:PFE0215w "ATP-depend...   465  1.5e-43   1
UNIPROTKB|Q8I457 - symbol:PFE0215w "ATP-dependent helicas...   465  1.5e-43   1
UNIPROTKB|Q5L3G9 - symbol:cshA "DEAD-box ATP-dependent RN...   392  2.1e-36   1
UNIPROTKB|Q73EU1 - symbol:cshA "DEAD-box ATP-dependent RN...   385  1.2e-35   1
UNIPROTKB|A0R8U6 - symbol:cshA "DEAD-box ATP-dependent RN...   381  3.1e-35   1
UNIPROTKB|Q63GX5 - symbol:cshA "DEAD-box ATP-dependent RN...   381  3.1e-35   1
UNIPROTKB|Q6HPE6 - symbol:cshA "DEAD-box ATP-dependent RN...   381  3.1e-35   1
UNIPROTKB|Q81IT9 - symbol:cshA "DEAD-box ATP-dependent RN...   381  3.1e-35   1
UNIPROTKB|Q81VG0 - symbol:cshA "DEAD-box ATP-dependent RN...   381  3.1e-35   1
TIGR_CMR|BA_0247 - symbol:BA_0247 "ATP-dependent RNA heli...   381  3.1e-35   1
UNIPROTKB|Q4K8U0 - symbol:deaD "Cold-shock DEAD box prote...   344  4.5e-34   2
UNIPROTKB|Q65N62 - symbol:cshA "DEAD-box ATP-dependent RN...   368  7.4e-34   1
UNIPROTKB|P96614 - symbol:cshA "DEAD-box ATP-dependent RN...   367  9.5e-34   1
UNIPROTKB|Q3AFI3 - symbol:CHY_0229 "ATP-dependent RNA hel...   362  3.2e-33   1
TIGR_CMR|CHY_0229 - symbol:CHY_0229 "ATP-dependent RNA he...   362  3.2e-33   1
TIGR_CMR|SO_4034 - symbol:SO_4034 "ATP-dependent RNA heli...   367  3.6e-33   1
UNIPROTKB|F1NJ30 - symbol:DDX21 "Uncharacterized protein"...   353  2.9e-32   1
UNIPROTKB|Q9KLE2 - symbol:VC_A0804 "ATP-dependent RNA hel...   353  1.6e-31   1
TIGR_CMR|VC_A0804 - symbol:VC_A0804 "ATP-dependent RNA he...   353  1.6e-31   1
ASPGD|ASPL0000077157 - symbol:AN10557 species:162425 "Eme...   345  1.2e-30   1
SGD|S000005730 - symbol:DED1 "ATP-dependent DEAD (Asp-Glu...   337  6.3e-30   1
SGD|S000006040 - symbol:DBP1 "Putative ATP-dependent RNA ...   335  1.1e-29   1
UNIPROTKB|Q11039 - symbol:deaD "Cold-shock DEAD box prote...   332  1.6e-29   1
SGD|S000001107 - symbol:RRP3 "Protein involved in rRNA pr...   329  1.7e-29   1
UNIPROTKB|Q81JK1 - symbol:BAS5307 "ATP-dependent RNA heli...   327  1.8e-29   1
TIGR_CMR|BA_5703 - symbol:BA_5703 "ATP-dependent RNA heli...   327  1.8e-29   1
TIGR_CMR|SPO_1443 - symbol:SPO_1443 "ATP-dependent RNA he...   326  2.1e-29   1
CGD|CAL0004832 - symbol:orf19.7392 species:5476 "Candida ...   332  3.2e-29   1
TIGR_CMR|CPS_1590 - symbol:CPS_1590 "ATP-dependent RNA he...   323  4.4e-29   1
TAIR|locus:2222617 - symbol:AT5G14610 species:3702 "Arabi...   330  6.3e-29   1
TAIR|locus:2084178 - symbol:DRH1 "DEAD box RNA helicase 1...   328  6.7e-29   1
TIGR_CMR|CPS_1726 - symbol:CPS_1726 "RNA helicase DeaD" s...   327  8.2e-29   1
POMBASE|SPCC1795.11 - symbol:sum3 "translation initiation...   324  2.0e-28   1
TAIR|locus:2076351 - symbol:AT3G58510 species:3702 "Arabi...   321  3.8e-28   1
UNIPROTKB|Q81QF0 - symbol:BAS2301 "ATP-dependent RNA heli...   314  3.9e-28   1
TIGR_CMR|BA_2475 - symbol:BA_2475 "ATP-dependent RNA heli...   314  3.9e-28   1
TIGR_CMR|SO_1383 - symbol:SO_1383 "ATP-dependent RNA heli...   312  6.4e-28   1
CGD|CAL0000056 - symbol:orf19.7546 species:5476 "Candida ...   314  1.3e-27   1
TIGR_CMR|VC_2564 - symbol:VC_2564 "ATP-dependent RNA heli...   289  1.7e-27   2
TAIR|locus:2035741 - symbol:RH20 "RNA helicase 20" specie...   311  1.9e-27   1
TIGR_CMR|GSU_0914 - symbol:GSU_0914 "ATP-dependent RNA he...   307  2.2e-27   1
POMBASE|SPBP8B7.16c - symbol:dbp2 "ATP-dependent RNA heli...   312  2.4e-27   1
TAIR|locus:2081061 - symbol:AT3G06480 species:3702 "Arabi...   318  2.9e-27   1
UNIPROTKB|F1RX16 - symbol:DDX3X "Uncharacterized protein"...   313  3.5e-27   1
UNIPROTKB|Q485I3 - symbol:dbpA "ATP-dependent RNA helicas...   282  4.2e-27   2
TIGR_CMR|CPS_1540 - symbol:CPS_1540 "ATP-dependent RNA he...   282  4.2e-27   2
UNIPROTKB|A4QVP2 - symbol:TIF1 "ATP-dependent RNA helicas...   304  4.5e-27   1
WB|WBGene00002083 - symbol:inf-1 species:6239 "Caenorhabd...   304  4.5e-27   1
TAIR|locus:2162022 - symbol:AT5G63120 species:3702 "Arabi...   310  5.3e-27   1
UNIPROTKB|P25888 - symbol:rhlE "ATP-dependent RNA helicas...   304  5.5e-27   1
UNIPROTKB|G5E631 - symbol:DDX3X "Uncharacterized protein"...   311  5.9e-27   1
UNIPROTKB|J9P0V9 - symbol:DDX3X "Uncharacterized protein"...   311  5.9e-27   1
UNIPROTKB|O00571 - symbol:DDX3X "ATP-dependent RNA helica...   311  5.9e-27   1
UNIPROTKB|Q48PB7 - symbol:PSPPH_0449 "ATP-dependent RNA h...   310  6.4e-27   1
UNIPROTKB|O05855 - symbol:rhlE "PROBABLE ATP-DEPENDENT RN...   307  7.1e-27   1
UNIPROTKB|P0A9P6 - symbol:deaD "DeaD, DEAD-box RNA helica...   309  8.4e-27   1
TIGR_CMR|GSU_0491 - symbol:GSU_0491 "ATP-dependent RNA he...   302  8.8e-27   1
UNIPROTKB|Q0C354 - symbol:rhlE "ATP-dependent RNA helicas...   303  9.1e-27   1
UNIPROTKB|B4E132 - symbol:DDX3Y "Uncharacterized protein"...   301  9.4e-27   1
TIGR_CMR|BA_4509 - symbol:BA_4509 "ATP-dependent RNA heli...   301  9.4e-27   1
MGI|MGI:1349406 - symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) bo...   309  9.5e-27   1
MGI|MGI:103064 - symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/Hi...   309  9.7e-27   1
RGD|1564771 - symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box po...   309  9.7e-27   1
UNIPROTKB|I3LHW0 - symbol:I3LHW0 "Uncharacterized protein...   308  1.0e-26   1
UNIPROTKB|F1SQ03 - symbol:LOC100524536 "Uncharacterized p...   308  1.1e-26   1
UNIPROTKB|F1NIX2 - symbol:DDX3X "Uncharacterized protein"...   308  1.1e-26   1
UNIPROTKB|F1NIX1 - symbol:DDX3X "Uncharacterized protein"...   308  1.1e-26   1
SGD|S000003046 - symbol:DBP3 "RNA-Dependent ATPase, membe...   305  1.2e-26   1
ASPGD|ASPL0000037981 - symbol:AN2932 species:162425 "Emer...   300  1.2e-26   1
UNIPROTKB|F1NTS2 - symbol:EIF4A3 "Eukaryotic initiation f...   300  1.2e-26   1
UNIPROTKB|Q5ZM36 - symbol:EIF4A3 "Eukaryotic initiation f...   300  1.2e-26   1
UNIPROTKB|Q2NL22 - symbol:EIF4A3 "Eukaryotic initiation f...   300  1.2e-26   1
UNIPROTKB|E2RDZ4 - symbol:EIF4A3 "Uncharacterized protein...   300  1.2e-26   1
UNIPROTKB|P38919 - symbol:EIF4A3 "Eukaryotic initiation f...   300  1.2e-26   1
UNIPROTKB|A6M931 - symbol:EIF4A3 "Eukaryotic initiation f...   300  1.2e-26   1
UNIPROTKB|F1RZ83 - symbol:EIF4A3 "Eukaryotic initiation f...   300  1.2e-26   1
RGD|1591139 - symbol:Eif4a3 "eukaryotic translation initi...   300  1.2e-26   1
TAIR|locus:2030285 - symbol:AT1G72730 species:3702 "Arabi...   300  1.2e-26   1

WARNING:  Descriptions of 793 database sequences were not reported due to the
          limiting value of parameter V = 100.


>TAIR|locus:504955106 [details] [associations]
            symbol:emb1138 "embryo defective 1138" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0009793 "embryo development ending in seed
            dormancy" evidence=NAS] [GO:0009570 "chloroplast stroma"
            evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009941
            "chloroplast envelope" evidence=IDA] InterPro:IPR001650
            InterPro:IPR001878 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS00039
            PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0009570 GO:GO:0016020 GO:GO:0046872 GO:GO:0008270
            GO:GO:0009941 GO:GO:0003723 EMBL:AF058914 Gene3D:4.10.60.10
            SUPFAM:SSF57756 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268805 UniGene:At.23875 EMBL:AJ010457 EMBL:AC137518
            EMBL:AY080625 EMBL:AY091068 EMBL:AY094485 EMBL:AY123000
            EMBL:AY128278 EMBL:BT000713 EMBL:BT002289 EMBL:BT002456
            EMBL:AY102126 EMBL:BT004533 EMBL:AK229821 IPI:IPI00523172
            IPI:IPI00656967 PIR:T01202 PIR:T51738 RefSeq:NP_001031943.1
            RefSeq:NP_680225.2 UniGene:At.66764 ProteinModelPortal:Q8L7S8
            SMR:Q8L7S8 STRING:Q8L7S8 PaxDb:Q8L7S8 PRIDE:Q8L7S8
            EnsemblPlants:AT5G26742.2 GeneID:832713 KEGG:ath:AT5G26742
            GeneFarm:1570 TAIR:At5g26742 InParanoid:Q8L7S8 OMA:ISHEQGW
            PhylomeDB:Q8L7S8 ProtClustDB:CLSN2680279 Genevestigator:Q8L7S8
            Uniprot:Q8L7S8
        Length = 748

 Score = 1560 (554.2 bits), Expect = 1.3e-167, Sum P(2) = 1.3e-167
 Identities = 301/355 (84%), Positives = 334/355 (94%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             MLFSATMP+WVKKL+RKYLDNPLNIDLVG+QDEKLAEGIKLYAI+TT+TSKRTILSDLIT
Sbjct:   287 MLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLIT 346

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVA 120
             VYAKGGKTIVFTQTKRDADEVSLAL++ IA+EALHGDISQHQRERTLN FRQGKFTVLVA
Sbjct:   347 VYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVA 406

Query:   121 TDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 180
             TDVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRTGRAGKEG+AILM TSSQ+RTVRSLE
Sbjct:   407 TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLE 466

Query:   181 RDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGTDALAAA 240
             RDVGC FEF+SPP V D+LESSA+QVVATLNGVHP+S++FF+ TAQ+L EEKGTDALAAA
Sbjct:   467 RDVGCHFEFISPPTVGDLLESSADQVVATLNGVHPDSIKFFSATAQKLYEEKGTDALAAA 526

Query:   241 LAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSDVYPTAADEIG 300
             LA LSGFS+PPSSRSL++HE+GWVTLQL RD   +RGF+SARSV GFLSD+Y TAADE+G
Sbjct:   527 LAHLSGFSQPPSSRSLLSHEKGWVTLQLIRDPTNARGFLSARSVTGFLSDLYRTAADEVG 586

Query:   301 KIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNTISKITKLPALQDDGPSSDNY 355
             KI +IADDR+QGAVFDLPEEIAKELL K +P GN++S ITKLP LQDDGPSSDNY
Sbjct:   587 KIFLIADDRIQGAVFDLPEEIAKELLEKDVPEGNSLSMITKLPPLQDDGPSSDNY 641

 Score = 92 (37.4 bits), Expect = 1.3e-167, Sum P(2) = 1.3e-167
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query:   431 DDWLIXXXXXXXXXX-XXXXXXXXACFNCGKSGHRASECPN 470
             DDWLI                   +CF CGKSGHRA++CP+
Sbjct:   704 DDWLIGGRSSSSSRAPSRERSFGGSCFICGKSGHRATDCPD 744


>TAIR|locus:2087852 [details] [associations]
            symbol:PMH2 "putative mitochondrial RNA helicase 2"
            species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA;ISS] [GO:0005739 "mitochondrion"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
            "cell wall" evidence=IDA] [GO:0000373 "Group II intron splicing"
            evidence=IMP] [GO:0009409 "response to cold" evidence=IEP]
            [GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005524
            GO:GO:0005618 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043234
            GO:GO:0005730 GO:GO:0009409 GO:GO:0003723 EMBL:AB022215
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0000373 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            EMBL:AY062502 EMBL:AY093256 IPI:IPI00524382 RefSeq:NP_188872.2
            UniGene:At.27322 ProteinModelPortal:Q9LUW5 SMR:Q9LUW5 STRING:Q9LUW5
            PaxDb:Q9LUW5 PRIDE:Q9LUW5 EnsemblPlants:AT3G22330.1 GeneID:821802
            KEGG:ath:AT3G22330 GeneFarm:1033 TAIR:At3g22330
            HOGENOM:HOG000268800 InParanoid:Q9LUW5 OMA:HGRGRNP PhylomeDB:Q9LUW5
            ProtClustDB:CLSN2684125 Genevestigator:Q9LUW5 GermOnline:AT3G22330
            Uniprot:Q9LUW5
        Length = 616

 Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
 Identities = 123/196 (62%), Positives = 155/196 (79%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             M+FSATMPSW++ L++KYL+NPL +DLVG+ D+KLA+GI  Y+I   +  + +I+  L+T
Sbjct:   285 MMFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYGRASIIGPLVT 344

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVA 120
              +AKGGK IVFTQTKRDAD +S AL      EALHGDISQ QRERTL GFR G F +LVA
Sbjct:   345 EHAKGGKCIVFTQTKRDADRLSYALARSFKCEALHGDISQSQRERTLAGFRDGHFNILVA 404

Query:   121 TDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 180
             TDVAARGLD+PNVDLIIHYELPN+ ETFVHR+GRTGRAGK+G+AIL+++  Q R V+ +E
Sbjct:   405 TDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSRAVKIIE 464

Query:   181 RDVGCKFEFVSPPVVE 196
             R+VG +F  +    VE
Sbjct:   465 REVGSRFTELPSIAVE 480


>TAIR|locus:2087832 [details] [associations]
            symbol:PMH1 "putative mitochondrial RNA helicase 1"
            species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IDA]
            [GO:0003723 "RNA binding" evidence=IDA] [GO:0009409 "response to
            cold" evidence=IEP] [GO:0009414 "response to water deprivation"
            evidence=IMP] [GO:0009651 "response to salt stress" evidence=IMP]
            [GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0043234 GO:GO:0003677 GO:GO:0009651
            GO:GO:0009409 GO:GO:0009414 GO:GO:0003723 EMBL:AB022215
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268800 ProtClustDB:CLSN2684125 EMBL:AY091091
            EMBL:AJ010461 IPI:IPI00517476 PIR:T51341 RefSeq:NP_188870.1
            UniGene:At.25190 ProteinModelPortal:Q9LUW6 SMR:Q9LUW6 IntAct:Q9LUW6
            STRING:Q9LUW6 PaxDb:Q9LUW6 PRIDE:Q9LUW6 EnsemblPlants:AT3G22310.1
            GeneID:821800 KEGG:ath:AT3G22310 GeneFarm:922 TAIR:At3g22310
            InParanoid:Q9LUW6 OMA:VSQGRQV PhylomeDB:Q9LUW6
            Genevestigator:Q9LUW6 GermOnline:AT3G22310 Uniprot:Q9LUW6
        Length = 610

 Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
 Identities = 123/212 (58%), Positives = 158/212 (74%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             M+FSATMPSW++ L++KYL+NPL IDLVG+ D+KLA+GI +Y+I+  +  + +I+  L+ 
Sbjct:   297 MMFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVK 356

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVA 120
              + KGGK IVFTQTKRDAD ++  L      EALHGDISQ QRERTL GFR G F++LVA
Sbjct:   357 EHGKGGKCIVFTQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDGNFSILVA 416

Query:   121 TDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 180
             TDVAARGLD+PNVDL+IHYELPN+ ETFVHR+GRTGRAGK+G+AIL+    Q R V+ +E
Sbjct:   417 TDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAVKMIE 476

Query:   181 RDVGCKFEFVSPPVVEDVLESSAEQVVATLNG 212
             ++VG +F  +    VE    S  E V A   G
Sbjct:   477 KEVGSRFNELPSIAVERGSASMFEGVGARSGG 508


>ZFIN|ZDB-GENE-031113-10 [details] [associations]
            symbol:ddx21 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
            21" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012562 InterPro:IPR017956 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS51194 SMART:SM00384 SMART:SM00490
            ZFIN:ZDB-GENE-031113-10 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 CTD:9188 HOVERGEN:HBG051331
            OrthoDB:EOG46143T EMBL:BC160629 IPI:IPI00611974
            RefSeq:NP_001120807.1 UniGene:Dr.104447 ProteinModelPortal:B1H1J4
            STRING:B1H1J4 GeneID:799650 KEGG:dre:799650 NextBio:20933916
            Uniprot:B1H1J4
        Length = 759

 Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
 Identities = 142/358 (39%), Positives = 214/358 (59%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP-LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLI 59
             +LFSAT PSWV  +++KY+ +  +++DL+G + +K A  ++  AI+   + + +++ D+I
Sbjct:   352 LLFSATCPSWVYDVAKKYMRSQFIHVDLIGKKTQKAATTVEHLAIACHWSQRASVIGDVI 411

Query:    60 TVYAKG-GKTIVFTQTKRDADEVSLALTSIIAS-EALHGDISQHQRERTLNGFRQGKFTV 117
              VY+   G+TIVF +TK++A E+SL  TSI  S ++LHGDI Q QRE TL GFR G F V
Sbjct:   412 QVYSGSHGRTIVFCETKKEATELSLN-TSIKQSAQSLHGDIPQKQREVTLKGFRNGSFEV 470

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             LVAT+VAARGLDIP VDL+I    PND E+++HRSGRTGRAG+ G  I  +   +   ++
Sbjct:   471 LVATNVAARGLDIPEVDLVIQSSPPNDVESYIHRSGRTGRAGRTGICICFYQRKEESQLK 530

Query:   178 SLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGT-DA 236
              +E+  G  F+ V  P   D+++SS++  V  L+ V   +V +F   AQ LI+++G  +A
Sbjct:   531 FVEQKAGITFKRVGVPTAYDIIQSSSKDAVRFLDSVPAVAVGYFREAAQELIQQRGAVEA 590

Query:   237 LAAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSDVYPTAA 296
             LAAALA +SG +     RSLIN E G+ ++ L+          + R +   L +      
Sbjct:   591 LAAALAHISG-ATSLEQRSLINSEPGFSSMILSCSQEMHSISFAWRGLKEQLGEEID--- 646

Query:   297 DEIGKIHIIADDRVQGAVFDLPEEIAKELLNK-QIPPGNTISKITKLPALQDD-GPSS 352
               I   H++     +G  FD+P    KE+  K Q     T+S  T+LP L+    P+S
Sbjct:   647 QHIS--HMVFIKGKKGVCFDVPVSKLKEVQEKWQDSRRWTLSTATQLPELEQSLRPNS 702


>UNIPROTKB|F1MMK3 [details] [associations]
            symbol:DDX50 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00680000100003 CTD:79009 KO:K13183
            OMA:GDTEEGC EMBL:DAAA02061828 IPI:IPI00689334 RefSeq:NP_001192982.1
            UniGene:Bt.55841 PRIDE:F1MMK3 Ensembl:ENSBTAT00000022002
            GeneID:534331 KEGG:bta:534331 NextBio:20876363 ArrayExpress:F1MMK3
            Uniprot:F1MMK3
        Length = 737

 Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
 Identities = 137/359 (38%), Positives = 210/359 (58%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLI 59
             +LFSAT P WV K+++KY+ +    +DLVG   +K A  ++  AI    + +  ++ D++
Sbjct:   323 LLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVL 382

Query:    60 TVYAKG-GKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVL 118
              VY+   G+ I+F +TK++  E+++       ++ LHGDI+Q QRE TL GFR+G F VL
Sbjct:   383 QVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVL 442

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             VAT+VAARGLDIP VDL+I    P D E+++HRSGRTGRAG+ G  I  +   +R  +R 
Sbjct:   443 VATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICICFYQPRERGQLRY 502

Query:   179 LERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGT-DAL 237
             +E+  G  F+ V  P   D+++S +   + +L  V   +V+FF P+AQRLIEEKG  DAL
Sbjct:   503 VEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVSYAAVDFFRPSAQRLIEEKGAVDAL 562

Query:   238 AAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSDVYPTAAD 297
             AAALA +SG S     RSLI  ++G+VT+ L           + + +   LS     A  
Sbjct:   563 AAALAHISGASSF-EPRSLITSDKGFVTMTLESPEEIQDVSCAWKELNRKLSS---NAVS 618

Query:   298 EIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNTISKITKLPALQD--DGPSSDN 354
             +I ++ ++  +   G  FD+P   ++ L  +       +S   KLP +++  DG +S N
Sbjct:   619 QITRMCLLKGN--MGVCFDVPTTESERLQAEWHDSDWILSVPAKLPEIEEYYDGNTSSN 675


>UNIPROTKB|E2QTT0 [details] [associations]
            symbol:DDX50 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00680000100003 OMA:GDTEEGC EMBL:AAEX03002786
            Ensembl:ENSCAFT00000021867 NextBio:20898308 Uniprot:E2QTT0
        Length = 738

 Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
 Identities = 137/359 (38%), Positives = 210/359 (58%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLI 59
             +LFSAT P WV K+++KY+ +    +DLVG   +K A  ++  AI    + +  ++ D++
Sbjct:   324 LLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVL 383

Query:    60 TVYAKG-GKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVL 118
              VY+   G+ I+F +TK++  E+++       ++ LHGDI+Q QRE TL GFR+G F VL
Sbjct:   384 QVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVL 443

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             VAT+VAARGLDIP VDL+I    P D E+++HRSGRTGRAG+ G  I  +   +R  +R 
Sbjct:   444 VATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICICFYQPRERGQLRY 503

Query:   179 LERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGT-DAL 237
             +E+  G  F+ V  P   D+++S +   + +L  V   +V+FF P+AQRLIEEKG  DAL
Sbjct:   504 VEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVSYAAVDFFRPSAQRLIEEKGAVDAL 563

Query:   238 AAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSDVYPTAAD 297
             AAALA +SG S     RSLI  ++G+VT+ L           + + +   LS     A  
Sbjct:   564 AAALAHISGASSF-EPRSLITSDKGFVTMTLESPEEIQDVSCAWKELNRKLSS---NAVS 619

Query:   298 EIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNTISKITKLPALQD--DGPSSDN 354
             +I ++ ++  +   G  FD+P   ++ L  +       +S   KLP +++  DG +S N
Sbjct:   620 QITRMCLLKGN--MGVCFDVPTTESERLQAEWHDSDWILSLPAKLPEIEEYYDGNTSSN 676


>UNIPROTKB|E2RPT4 [details] [associations]
            symbol:DDX50 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00680000100003
            EMBL:AAEX03002786 Ensembl:ENSCAFT00000038045 Uniprot:E2RPT4
        Length = 687

 Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
 Identities = 137/359 (38%), Positives = 210/359 (58%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLI 59
             +LFSAT P WV K+++KY+ +    +DLVG   +K A  ++  AI    + +  ++ D++
Sbjct:   325 LLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVL 384

Query:    60 TVYAKG-GKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVL 118
              VY+   G+ I+F +TK++  E+++       ++ LHGDI+Q QRE TL GFR+G F VL
Sbjct:   385 QVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVL 444

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             VAT+VAARGLDIP VDL+I    P D E+++HRSGRTGRAG+ G  I  +   +R  +R 
Sbjct:   445 VATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICICFYQPRERGQLRY 504

Query:   179 LERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGT-DAL 237
             +E+  G  F+ V  P   D+++S +   + +L  V   +V+FF P+AQRLIEEKG  DAL
Sbjct:   505 VEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVSYAAVDFFRPSAQRLIEEKGAVDAL 564

Query:   238 AAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSDVYPTAAD 297
             AAALA +SG S     RSLI  ++G+VT+ L           + + +   LS     A  
Sbjct:   565 AAALAHISGASSF-EPRSLITSDKGFVTMTLESPEEIQDVSCAWKELNRKLSS---NAVS 620

Query:   298 EIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNTISKITKLPALQD--DGPSSDN 354
             +I ++ ++  +   G  FD+P   ++ L  +       +S   KLP +++  DG +S N
Sbjct:   621 QITRMCLLKGN--MGVCFDVPTTESERLQAEWHDSDWILSLPAKLPEIEEYYDGNTSSN 677


>UNIPROTKB|Q9BQ39 [details] [associations]
            symbol:DDX50 "ATP-dependent RNA helicase DDX50"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005730
            EMBL:CH471083 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 EMBL:AL359844 HOGENOM:HOG000268805
            HOVERGEN:HBG051331 OrthoDB:EOG46143T EMBL:AF334103 EMBL:BC000210
            EMBL:BC000272 EMBL:BC018637 IPI:IPI00031554 RefSeq:NP_076950.1
            UniGene:Hs.522984 PDB:2E29 PDBsum:2E29 ProteinModelPortal:Q9BQ39
            SMR:Q9BQ39 IntAct:Q9BQ39 STRING:Q9BQ39 PhosphoSite:Q9BQ39
            DMDM:55976580 SWISS-2DPAGE:Q9BQ39 PaxDb:Q9BQ39 PeptideAtlas:Q9BQ39
            PRIDE:Q9BQ39 DNASU:79009 Ensembl:ENST00000373585 GeneID:79009
            KEGG:hsa:79009 UCSC:uc001jou.3 CTD:79009 GeneCards:GC10P070661
            HGNC:HGNC:17906 HPA:HPA037388 MIM:610373 neXtProt:NX_Q9BQ39
            PharmGKB:PA134948525 InParanoid:Q9BQ39 KO:K13183 OMA:GDTEEGC
            PhylomeDB:Q9BQ39 ChiTaRS:DDX50 EvolutionaryTrace:Q9BQ39
            GenomeRNAi:79009 NextBio:67657 ArrayExpress:Q9BQ39 Bgee:Q9BQ39
            CleanEx:HS_DDX50 Genevestigator:Q9BQ39 Uniprot:Q9BQ39
        Length = 737

 Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
 Identities = 137/359 (38%), Positives = 210/359 (58%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLI 59
             +LFSAT P WV K+++KY+ +    +DLVG   +K A  ++  AI    + +  ++ D++
Sbjct:   323 LLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVL 382

Query:    60 TVYAKG-GKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVL 118
              VY+   G+ I+F +TK++  E+++       ++ LHGDI+Q QRE TL GFR+G F VL
Sbjct:   383 QVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVL 442

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             VAT+VAARGLDIP VDL+I    P D E+++HRSGRTGRAG+ G  I  +   +R  +R 
Sbjct:   443 VATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICICFYQPRERGQLRY 502

Query:   179 LERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGT-DAL 237
             +E+  G  F+ V  P   D+++S +   + +L  V   +V+FF P+AQRLIEEKG  DAL
Sbjct:   503 VEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVSYAAVDFFRPSAQRLIEEKGAVDAL 562

Query:   238 AAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSDVYPTAAD 297
             AAALA +SG S     RSLI  ++G+VT+ L           + + +   LS     A  
Sbjct:   563 AAALAHISGASSF-EPRSLITSDKGFVTMTLESLEEIQDVSCAWKELNRKLSS---NAVS 618

Query:   298 EIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNTISKITKLPALQD--DGPSSDN 354
             +I ++ ++  +   G  FD+P   ++ L  +       +S   KLP +++  DG +S N
Sbjct:   619 QITRMCLLKGN--MGVCFDVPTTESERLQAEWHDSDWILSVPAKLPEIEEYYDGNTSSN 675


>MGI|MGI:2182303 [details] [associations]
            symbol:Ddx50 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 50"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 MGI:MGI:2182303 GO:GO:0005886 GO:GO:0005524
            GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00680000100003 HOGENOM:HOG000268805
            HOVERGEN:HBG051331 OrthoDB:EOG46143T CTD:79009 KO:K13183
            OMA:GDTEEGC EMBL:AF334104 IPI:IPI00117771 RefSeq:NP_444413.1
            UniGene:Mm.114116 ProteinModelPortal:Q99MJ9 SMR:Q99MJ9
            PhosphoSite:Q99MJ9 PaxDb:Q99MJ9 PRIDE:Q99MJ9
            Ensembl:ENSMUST00000020270 GeneID:94213 KEGG:mmu:94213
            UCSC:uc007fhp.1 InParanoid:Q99MJ9 NextBio:352175 Bgee:Q99MJ9
            CleanEx:MM_DDX50 Genevestigator:Q99MJ9
            GermOnline:ENSMUSG00000020076 Uniprot:Q99MJ9
        Length = 734

 Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
 Identities = 135/359 (37%), Positives = 209/359 (58%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLI 59
             +LFSAT P WV K+++KY+ +    +DLVG   +K A  ++  AI    + +  ++ D++
Sbjct:   320 LLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVL 379

Query:    60 TVYAKG-GKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVL 118
              VY+   G+ I+F +TK++  E+++       ++ LHGDI+Q QRE TL GFR+G F VL
Sbjct:   380 QVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVL 439

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             VAT+VAARGLDIP VDL+I    P D E+++HRSGRTGRAG+ G  +  +   +R  +R 
Sbjct:   440 VATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICVCFYQPRERGQLRY 499

Query:   179 LERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGT-DAL 237
             +E+  G  F+ V  P   D+++S +   + +L  V   +V+FF P+AQRLIEEKG  DAL
Sbjct:   500 VEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVSYAAVDFFRPSAQRLIEEKGAVDAL 559

Query:   238 AAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSDVYPTAAD 297
             AAALA +SG S     RSLI  ++G+VT+ L           + + +   LS     A  
Sbjct:   560 AAALAHISGASSF-EPRSLITSDKGFVTMTLESPEEIQDVSCAWKELNRKLSS---NAVS 615

Query:   298 EIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNTISKITKLPALQD--DGPSSDN 354
              + ++ ++  +   G  FD+P   ++ L  +       +S   KLP +++  DG +S N
Sbjct:   616 HVTRMCLLKGN--MGVCFDVPTSESERLQAEWHDSDWILSVPAKLPEIEEYYDGNTSSN 672


>UNIPROTKB|F1SUG8 [details] [associations]
            symbol:DDX50 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00680000100003 OMA:GDTEEGC
            EMBL:CU468175 Ensembl:ENSSSCT00000011216 Uniprot:F1SUG8
        Length = 737

 Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
 Identities = 134/359 (37%), Positives = 208/359 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLI 59
             +LFSAT P WV K+++KY+ +    +DLVG   +K A  ++  AI    + +  ++ D++
Sbjct:   323 LLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVL 382

Query:    60 TVYAKG-GKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVL 118
              VY+   G+ I+F +TK++  E+++       ++ LHGDI+Q QRE TL GFR+G F VL
Sbjct:   383 QVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVL 442

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             VAT+VAARGLDIP VDL+I    P D E+++HRSGRTGRAG+ G  I  +   +R  +R 
Sbjct:   443 VATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICICFYQPRERGQLRY 502

Query:   179 LERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGT-DAL 237
             +E+  G  F+ V  P   D+++S +   + +L  V   +V+FF P+AQRLIEEKG  DAL
Sbjct:   503 VEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVSYAAVDFFRPSAQRLIEEKGAVDAL 562

Query:   238 AAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSDVYPTAAD 297
             AAALA +SG S     RSLI  ++G+VT+ L           + + +   LS        
Sbjct:   563 AAALAHISGASSF-EPRSLITSDKGFVTMTLESPEEIQDVSCAWKELNKKLSS---NVLS 618

Query:   298 EIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNTISKITKLPALQD--DGPSSDN 354
             +I ++ ++  +   G  FD+    ++ L  +       +S   KLP +++  DG ++ N
Sbjct:   619 QITRMCLLKGN--MGVCFDVSTAESERLQAEWHDSDWILSVPAKLPEIEEHYDGNTASN 675


>UNIPROTKB|E1BW15 [details] [associations]
            symbol:DDX50 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
            "double-stranded RNA binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0009615 "response to virus" evidence=IEA]
            [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003725
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0043330 GeneTree:ENSGT00680000100003 OMA:EILCVAY
            EMBL:AADN02028009 IPI:IPI00582179 Ensembl:ENSGALT00000006591
            Uniprot:E1BW15
        Length = 693

 Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
 Identities = 117/271 (43%), Positives = 176/271 (64%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLI 59
             +LFSAT P+WV  +++KY+ +    +DL+G + +K A  ++  AI    + +  ++ D+I
Sbjct:   299 LLFSATCPNWVYDVAKKYMKSKYEQVDLIGRKTQKAATTVEHLAIECHWSQRAAVIGDVI 358

Query:    60 TVYAKG-GKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVL 118
              VY+   G+TIVF +TK+DA+E++L  +     ++LHGDI Q QRE TL GFR G F VL
Sbjct:   359 QVYSGSYGRTIVFCETKKDANELALNASIKQDCQSLHGDIPQKQREITLKGFRNGAFKVL 418

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             VAT+VAARGLDIP VDL++    P D E+++HRSGRTGRAG+ G  I  +   +   +R 
Sbjct:   419 VATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGRTGRAGRTGICICFYQRKEENQLRY 478

Query:   179 LERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKG-TDAL 237
             +E   G  F+ V  P   D++++S++  +  L+ V   ++E+F  +AQ LIEEKG  +AL
Sbjct:   479 VEVKAGITFKRVGVPTATDIIKASSKDAIRCLDSVPQTAIEYFKESAQLLIEEKGPVNAL 538

Query:   238 AAALAQLSGFSRPPSSRSLINHEQGWVTLQL 268
             AAALA +SG +     RSL+N + G+VT+ L
Sbjct:   539 AAALAHISG-ATSIEQRSLLNSDVGFVTMVL 568


>UNIPROTKB|E2QTL6 [details] [associations]
            symbol:DDX21 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0043330 "response to exogenous dsRNA"
            evidence=IEA] [GO:0009615 "response to virus" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0003725 "double-stranded
            RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0009615
            GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 GO:GO:0043330 InterPro:IPR014014 PROSITE:PS51195
            CTD:9188 RefSeq:XP_851746.2 ProteinModelPortal:E2QTL6
            Ensembl:ENSCAFT00000021901 GeneID:476891 KEGG:cfa:476891
            NextBio:20852481 Uniprot:E2QTL6
        Length = 785

 Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
 Identities = 115/271 (42%), Positives = 176/271 (64%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLI 59
             +LFSAT P WV  +++KY+ +    +DL+G + +K A  ++  AI    T +  ++ D+I
Sbjct:   374 LLFSATCPHWVYNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAIKCHWTQRAAVIGDVI 433

Query:    60 TVYAK-GGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVL 118
              VY+   G+TI+F +TK++A E+S  ++    +++LHGDI Q QRE TL GFR G F VL
Sbjct:   434 RVYSGFHGRTIIFCETKKEAQELSQNVSIRQDAQSLHGDIPQKQREITLKGFRNGDFGVL 493

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             VAT+VAARGLDIP VDL+I    P D E+++HRSGRTGRAG+ G  I  +   +   +  
Sbjct:   494 VATNVAARGLDIPEVDLVIQSSPPKDVESYIHRSGRTGRAGRTGICICFYQHKEEYQLAQ 553

Query:   179 LERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGT-DAL 237
             +E+  G KF+ +  P   +++++S++  +  L+ V P ++  F  +A++LIEEKG  +AL
Sbjct:   554 VEQKAGIKFKRIGVPSATEIIKASSKDAIRLLDSVPPTAISHFKQSAEKLIEEKGAVEAL 613

Query:   238 AAALAQLSGFSRPPSSRSLINHEQGWVTLQL 268
             AAALA +SG +     RSLIN + G+VT+ L
Sbjct:   614 AAALAHISG-ATSVDQRSLINSDAGFVTMIL 643


>UNIPROTKB|F6V8G4 [details] [associations]
            symbol:DDX21 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00680000100003 OMA:QCEPPRE EMBL:AAEX03002786
            Ensembl:ENSCAFT00000021901 Uniprot:F6V8G4
        Length = 786

 Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
 Identities = 115/271 (42%), Positives = 176/271 (64%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLI 59
             +LFSAT P WV  +++KY+ +    +DL+G + +K A  ++  AI    T +  ++ D+I
Sbjct:   374 LLFSATCPHWVYNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAIKCHWTQRAAVIGDVI 433

Query:    60 TVYAK-GGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVL 118
              VY+   G+TI+F +TK++A E+S  ++    +++LHGDI Q QRE TL GFR G F VL
Sbjct:   434 RVYSGFHGRTIIFCETKKEAQELSQNVSIRQDAQSLHGDIPQKQREITLKGFRNGDFGVL 493

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             VAT+VAARGLDIP VDL+I    P D E+++HRSGRTGRAG+ G  I  +   +   +  
Sbjct:   494 VATNVAARGLDIPEVDLVIQSSPPKDVESYIHRSGRTGRAGRTGICICFYQHKEEYQLAQ 553

Query:   179 LERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGT-DAL 237
             +E+  G KF+ +  P   +++++S++  +  L+ V P ++  F  +A++LIEEKG  +AL
Sbjct:   554 VEQKAGIKFKRIGVPSATEIIKASSKDAIRLLDSVPPTAISHFKQSAEKLIEEKGAVEAL 613

Query:   238 AAALAQLSGFSRPPSSRSLINHEQGWVTLQL 268
             AAALA +SG +     RSLIN + G+VT+ L
Sbjct:   614 AAALAHISG-ATSVDQRSLINSDAGFVTMIL 643


>UNIPROTKB|A4FV23 [details] [associations]
            symbol:DDX21 "DDX21 protein" species:9913 "Bos taurus"
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00680000100003 CTD:9188 HOGENOM:HOG000268805
            HOVERGEN:HBG051331 OMA:EILCVAY OrthoDB:EOG46143T EMBL:DAAA02061828
            EMBL:BC123648 IPI:IPI00694353 RefSeq:NP_001076996.1
            UniGene:Bt.92068 Ensembl:ENSBTAT00000019351 GeneID:781917
            KEGG:bta:781917 InParanoid:A4FV23 NextBio:20925123 Uniprot:A4FV23
        Length = 784

 Score = 550 (198.7 bits), Expect = 4.4e-53, P = 4.4e-53
 Identities = 115/271 (42%), Positives = 175/271 (64%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLI 59
             +LFSAT P WV  +++KY+ +    +DL+G + +K A  ++  AI    T +  ++ D+I
Sbjct:   373 LLFSATCPYWVFNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAIKCHWTQRAAVIGDVI 432

Query:    60 TVYAK-GGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVL 118
              VY+   G+TI+F +TK++A E+S  +     +++LHGDI Q QRE TL GFR G F VL
Sbjct:   433 RVYSGFQGRTIIFCETKKEAQELSQNVAVRQDAQSLHGDIPQKQREITLKGFRNGDFGVL 492

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             VAT+VAARGLDIP VDL++    P D E+++HRSGRTGRAG+ G  I  +   +   +  
Sbjct:   493 VATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEEYQLAQ 552

Query:   179 LERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGT-DAL 237
             +E+  G KF+ +  P   +++++S++  +  L+ V P ++  F  +A++LIEEKG  +AL
Sbjct:   553 VEQKAGIKFKRIGVPSPTEIIKASSKDAIRLLDSVPPTAIGHFKQSAEKLIEEKGAVEAL 612

Query:   238 AAALAQLSGFSRPPSSRSLINHEQGWVTLQL 268
             AAALA +SG +     RSLIN E G+VT+ L
Sbjct:   613 AAALAHISG-ATSVDQRSLINSEAGFVTMIL 642


>RGD|1307306 [details] [associations]
            symbol:Ddx21 "DEAD (Asp-Glu-Ala-Asp) box helicase 21"
            species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0003725 "double-stranded RNA binding"
            evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0009615 "response to virus" evidence=ISO] [GO:0043330 "response
            to exogenous dsRNA" evidence=ISO] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            RGD:1307306 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00680000100003 CTD:9188 HOGENOM:HOG000268805
            HOVERGEN:HBG051331 OrthoDB:EOG46143T EMBL:BC105878 IPI:IPI00198801
            RefSeq:NP_001032278.1 UniGene:Rn.162310 ProteinModelPortal:Q3B8Q1
            STRING:Q3B8Q1 PhosphoSite:Q3B8Q1 PRIDE:Q3B8Q1
            Ensembl:ENSRNOT00000068184 GeneID:317399 KEGG:rno:317399
            UCSC:RGD:1307306 NextBio:671745 Genevestigator:Q3B8Q1
            Uniprot:Q3B8Q1
        Length = 782

 Score = 549 (198.3 bits), Expect = 5.5e-53, P = 5.5e-53
 Identities = 115/271 (42%), Positives = 174/271 (64%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLI 59
             +LFSAT P WV  +++KY+ +    +DL+G + +K A  ++  AI    T +  ++ D+I
Sbjct:   368 LLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKAAITVEHLAIKCHWTERAAVIGDVI 427

Query:    60 TVYA-KGGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVL 118
              VY+   G+TI+F +TK+DA E+S        +++LHGDI Q QRE TL GFR G F VL
Sbjct:   428 RVYSGHQGRTIIFCETKKDAQELSQNTCIKQDAQSLHGDIPQKQREITLKGFRNGNFGVL 487

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             VAT+VAARGLDIP VDL++    P D E+++HRSGRTGRAG+ G  I  +   +   +  
Sbjct:   488 VATNVAARGLDIPEVDLVVQSCPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEEYQLAQ 547

Query:   179 LERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGT-DAL 237
             +E+  G KF+ +  P   +++++S++  +  L+ V P ++  F  +A++LIEEKG  +AL
Sbjct:   548 VEQKAGIKFKRIGVPSATEIIKASSKDAIRLLDSVPPTAIGHFKQSAEKLIEEKGAVEAL 607

Query:   238 AAALAQLSGFSRPPSSRSLINHEQGWVTLQL 268
             AAALA +SG +     RSLIN + G+VT+ L
Sbjct:   608 AAALAHISG-ATSVDQRSLINSQAGFVTMIL 637


>MGI|MGI:1860494 [details] [associations]
            symbol:Ddx21 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 21"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=ISS] [GO:0003724 "RNA helicase
            activity" evidence=ISS] [GO:0003725 "double-stranded RNA binding"
            evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005730 "nucleolus" evidence=ISS] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0008152 "metabolic process"
            evidence=ISS] [GO:0009615 "response to virus" evidence=IMP]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0043330
            "response to exogenous dsRNA" evidence=IMP] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            MGI:MGI:1860494 GO:GO:0005524 GO:GO:0005730 EMBL:CH466553
            GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0043330 eggNOG:COG0513
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00680000100003 CTD:9188 HOGENOM:HOG000268805
            HOVERGEN:HBG051331 OMA:EILCVAY OrthoDB:EOG46143T EMBL:AF220365
            EMBL:AF159131 EMBL:AK160095 EMBL:BC043655 IPI:IPI00120691
            RefSeq:NP_062426.2 UniGene:Mm.413275 ProteinModelPortal:Q9JIK5
            SMR:Q9JIK5 DIP:DIP-48574N IntAct:Q9JIK5 STRING:Q9JIK5
            PhosphoSite:Q9JIK5 PaxDb:Q9JIK5 PRIDE:Q9JIK5
            Ensembl:ENSMUST00000045866 GeneID:56200 KEGG:mmu:56200
            InParanoid:Q3TVJ3 NextBio:312026 Bgee:Q9JIK5 CleanEx:MM_DDX21
            Genevestigator:Q9JIK5 GermOnline:ENSMUSG00000020075 Uniprot:Q9JIK5
        Length = 851

 Score = 553 (199.7 bits), Expect = 5.6e-53, P = 5.6e-53
 Identities = 115/271 (42%), Positives = 175/271 (64%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLI 59
             +LFSAT P WV  +++KY+ +    +DL+G + +K A  ++  AI    T +  ++ D+I
Sbjct:   444 LLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKAAITVEHLAIKCHWTERAAVIGDVI 503

Query:    60 TVYA-KGGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVL 118
              VY+   G+TI+F +TK+DA E+S        +++LHGDI Q QRE TL GFR G F VL
Sbjct:   504 RVYSGHQGRTIIFCETKKDAQELSQNTCIKQDAQSLHGDIPQKQREITLKGFRNGNFGVL 563

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             VAT+VAARGLDIP VDL++    P D E+++HRSGRTGRAG+ G  I  + + +   +  
Sbjct:   564 VATNVAARGLDIPEVDLVVQSCPPKDVESYIHRSGRTGRAGRTGVCICFYQNKEEYQLAQ 623

Query:   179 LERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGT-DAL 237
             +E+  G KF+ +  P   +++++S++  +  L+ V P ++  F  +A++LIEEKG  +AL
Sbjct:   624 VEQKAGIKFKRIGVPSATEIIKASSKDAIRLLDSVPPTAISHFKQSAEKLIEEKGAVEAL 683

Query:   238 AAALAQLSGFSRPPSSRSLINHEQGWVTLQL 268
             AAALA +SG +     RSLIN + G+VT+ L
Sbjct:   684 AAALAHISG-ATSVDQRSLINSQAGFVTMIL 713


>UNIPROTKB|Q9NR30 [details] [associations]
            symbol:DDX21 "Nucleolar RNA helicase 2" species:9606 "Homo
            sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
            "double-stranded RNA binding" evidence=IEA] [GO:0009615 "response
            to virus" evidence=IEA] [GO:0043330 "response to exogenous dsRNA"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005730 EMBL:CH471083 GO:GO:0009615 GO:GO:0003725
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            GO:GO:0043330 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            EMBL:U41387 EMBL:AF261903 EMBL:AF261917 EMBL:AF261904 EMBL:AF261905
            EMBL:AF261906 EMBL:AF261907 EMBL:AF261908 EMBL:AF261909
            EMBL:AF261910 EMBL:AF261911 EMBL:AF261912 EMBL:AF261913
            EMBL:AF261914 EMBL:AF261915 EMBL:AF261916 EMBL:AK315585
            EMBL:CR749598 EMBL:AL359844 EMBL:BC008071 IPI:IPI00015953
            IPI:IPI00477179 PIR:PC6010 RefSeq:NP_001243839.1 RefSeq:NP_004719.2
            UniGene:Hs.223141 ProteinModelPortal:Q9NR30 SMR:Q9NR30
            IntAct:Q9NR30 MINT:MINT-231639 STRING:Q9NR30 PhosphoSite:Q9NR30
            DMDM:76803555 SWISS-2DPAGE:Q9NR30 PaxDb:Q9NR30 PeptideAtlas:Q9NR30
            PRIDE:Q9NR30 DNASU:9188 Ensembl:ENST00000354185 GeneID:9188
            KEGG:hsa:9188 UCSC:uc001jov.1 CTD:9188 GeneCards:GC10P070715
            H-InvDB:HIX0008880 HGNC:HGNC:2744 HPA:HPA036592 MIM:606357
            neXtProt:NX_Q9NR30 PharmGKB:PA27210 HOGENOM:HOG000268805
            HOVERGEN:HBG051331 InParanoid:Q9NR30 OMA:EILCVAY OrthoDB:EOG46143T
            PhylomeDB:Q9NR30 ChiTaRS:DDX21 GenomeRNAi:9188 NextBio:34453
            ArrayExpress:Q9NR30 Bgee:Q9NR30 CleanEx:HS_DDX21
            Genevestigator:Q9NR30 GermOnline:ENSG00000165732 Uniprot:Q9NR30
        Length = 783

 Score = 547 (197.6 bits), Expect = 9.8e-53, P = 9.8e-53
 Identities = 115/271 (42%), Positives = 173/271 (63%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLI 59
             +LFSAT P WV  +++KY+ +    +DL+G + +K A  ++  AI    T +  ++ D+I
Sbjct:   372 LLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAIKCHWTQRAAVIGDVI 431

Query:    60 TVYA-KGGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVL 118
              VY+   G+TI+F +TK++A E+S        +++LHGDI Q QRE TL GFR G F VL
Sbjct:   432 RVYSGHQGRTIIFCETKKEAQELSQNSAIKQDAQSLHGDIPQKQREITLKGFRNGSFGVL 491

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             VAT+VAARGLDIP VDL+I    P D E+++HRSGRTGRAG+ G  I  +   +   +  
Sbjct:   492 VATNVAARGLDIPEVDLVIQSSPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEEYQLVQ 551

Query:   179 LERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGT-DAL 237
             +E+  G KF+ +  P   +++++S++  +  L+ V P ++  F  +A++LIEEKG  +AL
Sbjct:   552 VEQKAGIKFKRIGVPSATEIIKASSKDAIRLLDSVPPTAISHFKQSAEKLIEEKGAVEAL 611

Query:   238 AAALAQLSGFSRPPSSRSLINHEQGWVTLQL 268
             AAALA +SG +     RSLIN   G+VT+ L
Sbjct:   612 AAALAHISG-ATSVDQRSLINSNVGFVTMIL 641


>UNIPROTKB|F1LX16 [details] [associations]
            symbol:F1LX16 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00949361
            Ensembl:ENSRNOT00000004240 Uniprot:F1LX16
        Length = 659

 Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
 Identities = 114/271 (42%), Positives = 173/271 (63%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLI 59
             +LFSAT P WV  +++KY+ +    +DL+G + +K A  ++  AI    T +  ++ D+I
Sbjct:   252 LLFSATCPHWVFNVAKKYMKSTYKQVDLIGKKTQKAAITVEHLAIKCHWTERAAVIGDVI 311

Query:    60 TVYA-KGGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVL 118
              VY+   G+TI+F +TK+DA E+S        +++LHGDI Q QRE TL GFR   F VL
Sbjct:   312 RVYSGHQGRTIIFCETKKDAQELSQNTCIKQDAQSLHGDIPQKQREITLKGFRNDNFGVL 371

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             VAT+VAARGLDIP VDL++    P D E+++HRSGRTGRAG+ G  I  +   +   +  
Sbjct:   372 VATNVAARGLDIPEVDLVVQSCPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEEYQLAQ 431

Query:   179 LERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGT-DAL 237
             +E+  G KF+ +  P   +++++S++  +  L+ V P ++  F  +A++LIEEKG  +AL
Sbjct:   432 VEQKAGIKFKRIGVPSATEIIKASSKDAIRLLDSVPPTAIGHFKQSAEKLIEEKGAVEAL 491

Query:   238 AAALAQLSGFSRPPSSRSLINHEQGWVTLQL 268
             AAALA +SG +     RSLIN + G+VT+ L
Sbjct:   492 AAALAHISG-ATSVDQRSLINSQAGFVTMIL 521


>TAIR|locus:2167903 [details] [associations]
            symbol:PRH75 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM;IEA;IDA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
            [GO:0001510 "RNA methylation" evidence=RCA] [GO:0051604 "protein
            maturation" evidence=RCA] [GO:0016070 "RNA metabolic process"
            evidence=TAS] [GO:0017151 "DEAD/H-box RNA helicase binding"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005730
            GO:GO:0003723 GO:GO:0016070 GO:GO:0017151 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:AB019235 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268805 EMBL:X99938 EMBL:AY039576 EMBL:AY056137
            EMBL:BT008581 IPI:IPI00520493 RefSeq:NP_201025.1 UniGene:At.22598
            ProteinModelPortal:Q39189 SMR:Q39189 IntAct:Q39189 STRING:Q39189
            PaxDb:Q39189 PRIDE:Q39189 EnsemblPlants:AT5G62190.1 GeneID:836340
            KEGG:ath:AT5G62190 GeneFarm:918 TAIR:At5g62190 InParanoid:Q39189
            OMA:QCEPPRE PhylomeDB:Q39189 ProtClustDB:CLSN2687322
            Genevestigator:Q39189 GermOnline:AT5G62190 Uniprot:Q39189
        Length = 671

 Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
 Identities = 136/357 (38%), Positives = 198/357 (55%)

Query:     1 MLFSATMPSWVKKLSRKYLD-NPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLI 59
             +LFSAT+PSWVK +S ++L  +   IDLVGN   K +  ++  AI     +   ++ D+I
Sbjct:   285 LLFSATLPSWVKNISNRFLKRDQKTIDLVGNDKMKASNSVRHIAIPCNKAAMARLIPDII 344

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLV 119
             + Y+ GG+TI+F +TK    E+S  L     S ALHG+I Q QRE TL GFR GKF  LV
Sbjct:   345 SCYSSGGQTIIFAETKVQVSELSGLLDG---SRALHGEIPQSQREVTLAGFRNGKFATLV 401

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             AT+VAARGLDI +V LII  E P + E ++HRSGRTGRAG  G A+ ++  S++ +V  +
Sbjct:   402 ATNVAARGLDINDVQLIIQCEPPREVEAYIHRSGRTGRAGNTGVAVTLY-DSRKSSVSRI 460

Query:   180 ERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGTDA--- 236
             E++ G KFE ++ P  +++  S   +    +  V    V  F   A+ L+E  G  A   
Sbjct:   461 EKEAGIKFEHLAAPQPDEIARSGGMEAAEKVKQVCDSVVPAFLEAAKELLETSGLSAEVL 520

Query:   237 LAAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSDVYPTAA 296
             LA ALA+ +GF+     RSL+   + +VTL L       +   S   V G L  V P   
Sbjct:   521 LAKALAKTAGFTEI-KKRSLLTSMENYVTLHLEA----GKPIYSPSFVYGLLRRVLPDDK 575

Query:   297 DE-IGKIHIIADDRVQGAVFDLPE-EIAKELLNKQIPPGNTISKITK-LPALQDDGP 350
              E I  + + AD    GAVFD+ + ++   +   Q   G+   ++ K +P LQ+  P
Sbjct:   576 VEMIEGLSLTADKT--GAVFDVKQSDLDLFIAGAQKSAGSMSLEVVKVMPKLQEREP 630


>UNIPROTKB|F1SUG7 [details] [associations]
            symbol:DDX21 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
            [GO:0009615 "response to virus" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0003725 "double-stranded RNA binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005730 GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0043330
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00680000100003
            OMA:EILCVAY EMBL:CT737244 EMBL:CU468175 Ensembl:ENSSSCT00000011217
            Uniprot:F1SUG7
        Length = 855

 Score = 541 (195.5 bits), Expect = 1.3e-51, P = 1.3e-51
 Identities = 134/358 (37%), Positives = 205/358 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLI 59
             +LFSAT P WV  +++KY+ +    +DL+G + +K A  ++  AI    T +  ++ D+I
Sbjct:   444 LLFSATCPHWVYNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAIKCHWTQRAAVIGDVI 503

Query:    60 TVYAK-GGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVL 118
              VY+   G+TI+F +TK++A E+S        +++LHGDI Q QRE TL GFR G F VL
Sbjct:   504 RVYSGYQGRTIIFCETKKEAQELSQNAAVRQDAQSLHGDIPQKQREITLKGFRNGDFGVL 563

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             VAT+VAARGLDIP VDL++    P D E+++HRSGRTGRAG+ G  I  +   +   +  
Sbjct:   564 VATNVAARGLDIPEVDLVVQSCPPKDVESYIHRSGRTGRAGRTGICICFYQHKEEYQLTL 623

Query:   179 LERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGT-DAL 237
             +E+  G KF+ +  P   +++++S++  +  L+ V P ++  F  +A++LIEEKG  +AL
Sbjct:   624 VEQKAGIKFKRIGVPSPTEIIKASSKDAIRLLDSVPPTAIGHFKQSAEKLIEEKGAVEAL 683

Query:   238 AAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSA----FSRGFMSARSVMGFLSDVYP 293
             AAALA +SG +     RSLIN + G+VT+ L R S      S  +   +  +G   D+  
Sbjct:   684 AAALAHISG-ATSVDQRSLINSDAGFVTMIL-RCSIEMPNISYAWKELKEQLG--EDI-- 737

Query:   294 TAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGN-TISKITKLPALQDDGP 350
                D   K  +    + QG  FD+P     E+  K        +S  T+ P L+  GP
Sbjct:   738 ---DSKVKGMVFLKGK-QGVCFDIPTAAVTEVQEKWHDSRRWQLSVATEQPELE--GP 789


>RGD|1310934 [details] [associations]
            symbol:Ddx50 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 50"
            species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005886
            "plasma membrane" evidence=ISO] InterPro:IPR001650
            InterPro:IPR012562 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 RGD:1310934 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
            GO:GO:0004386 eggNOG:COG0513 EMBL:BC091427 IPI:IPI00764536
            UniGene:Rn.98470 SMR:Q5BJM0 Ensembl:ENSRNOT00000057582
            UCSC:RGD:1310934 HOGENOM:HOG000137600 NextBio:677841
            Genevestigator:Q5BJM0 Uniprot:Q5BJM0
        Length = 380

 Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
 Identities = 120/321 (37%), Positives = 186/321 (57%)

Query:    39 IKLY-AISTTATSKRTILSDLITVYAKG-GKTIVFTQTKRDADEVSLALTSIIASEALHG 96
             I L+ AI    + +  ++ D++ VY+   G+ I+F +TK++  E+++       ++ LHG
Sbjct:     4 INLHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHG 63

Query:    97 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 156
             DI+Q QRE TL GFR+G F VLVAT+VAARGLDIP VDL+I    P D E+++HRSGRTG
Sbjct:    64 DIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTG 123

Query:   157 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPE 216
             RAG+ G  +  +   +R  +R +E+  G  F+ V  P   D+++S +   + +L  V   
Sbjct:   124 RAGRTGICVCFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVSYA 183

Query:   217 SVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFS 275
             +V+FF P+AQRLIEEKG  DALAAALA +SG S     RSLI  ++G+VT+ L       
Sbjct:   184 AVDFFRPSAQRLIEEKGAVDALAAALAHISGASSF-EPRSLITSDKGFVTMTLESPEEIQ 242

Query:   276 RGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNT 335
                 + + +   LS     A  ++ ++ ++  +   G  FD+P   ++ L  +       
Sbjct:   243 DVSCAWKELNRKLSS---NAVSQVTRMCLLKGN--MGVCFDVPTSESERLQAEWHDSDWI 297

Query:   336 ISKITKLPALQD--DGPSSDN 354
             +S   KLP +++  DG +S N
Sbjct:   298 LSVPAKLPEIEEYYDGNTSSN 318


>UNIPROTKB|E1C6M6 [details] [associations]
            symbol:DDX21 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0005886 "plasma membrane" evidence=IEA] InterPro:IPR001650
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003676 GO:GO:0004386
            InterPro:IPR014001 PROSITE:PS51192 GeneTree:ENSGT00680000100003
            EMBL:AADN02028008 IPI:IPI00822651 ProteinModelPortal:E1C6M6
            Ensembl:ENSGALT00000040808 OMA:DWLENEA ArrayExpress:E1C6M6
            Uniprot:E1C6M6
        Length = 294

 Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
 Identities = 99/253 (39%), Positives = 155/253 (61%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLN-IDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLI 59
             +LFSAT P WV  +++KY+      +DL+G + ++ A  ++  AI   ++ +  +L D+I
Sbjct:    29 LLFSATCPRWVYDVAKKYMKGEYEQVDLIGKKTQRTATTVEHLAIQCRSSQRAEVLGDII 88

Query:    60 TVYAKG-GKTIVFTQTKRDADEVSLALTSIIASEA--LHGDISQHQRERTLNGFRQGKFT 116
              VY+   G+TIVF +TK++A+E  LAL S +  EA  LHGDI Q QRE TL GFR G F 
Sbjct:    89 QVYSGSHGRTIVFCETKKEANE--LALNSALKQEAQSLHGDIPQKQREVTLKGFRNGVFE 146

Query:   117 VLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTV 176
             VL+AT+VAARGLDIP VDL+I    P D ++++HRSGRTGRAG+ G  I  +   +   +
Sbjct:   147 VLIATNVAARGLDIPEVDLVIQCSPPKDVDSYIHRSGRTGRAGRTGICICFYQRKEEDLL 206

Query:   177 RSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGTDA 236
             + +E+  G  F  +  P   D++++S++     L+ V P ++++F    +  +EE+  DA
Sbjct:   207 KQVEQKAGITFRRIGVPSATDIIKASSDDAKKCLDAVPPSAIDYFRQLPE--LEEQPQDA 264

Query:   237 LAAALAQLSGFSR 249
              +    +  GF +
Sbjct:   265 -SRGPPRFGGFKK 276


>GENEDB_PFALCIPARUM|PFE0215w [details] [associations]
            symbol:PFE0215w "ATP-dependent helicase,
            putative" species:5833 "Plasmodium falciparum" [GO:0020011
            "apicoplast" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0006200 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AL844504 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            GO:GO:0020011 KO:K01509 RefSeq:XP_001351602.1
            ProteinModelPortal:Q8I457 EnsemblProtists:PFE0215w:mRNA
            GeneID:812915 KEGG:pfa:PFE0215w EuPathDB:PlasmoDB:PF3D7_0504400
            HOGENOM:HOG000284069 ProtClustDB:CLSZ2431865 Uniprot:Q8I457
        Length = 755

 Score = 465 (168.7 bits), Expect = 1.5e-43, P = 1.5e-43
 Identities = 122/348 (35%), Positives = 193/348 (55%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTT--ATSKRTILSDL 58
             +L+SAT PSW+K +S KYL NP  ID+V + + K A+ IK  AI T      K  +L D+
Sbjct:   367 LLYSATTPSWIKDISSKYLKNPFCIDVVDSSN-KTAKNIKHIAIKTPYDIKEKALLLEDI 425

Query:    59 ITVYAKGGKTIVFTQTKRDADEV-SLALTSIIASEALHGDISQHQRERTLNGFRQGKFTV 117
             I V + GG+ I+FT+TK +AD + S      ++   LHG+I+Q  RE T+  FRQG F +
Sbjct:   426 ILVKSNGGQVIIFTRTKLEADILCSEGSFKSLSFAVLHGNIAQSTREYTMQRFRQGMFQI 485

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             L+ATD+A+RGLDI NVDL+I    PN    ++HR+GRTGRA K+GT+++++++  ++ + 
Sbjct:   486 LIATDIASRGLDISNVDLVIQCFPPNYSAVYIHRAGRTGRANKKGTSLVLYSNEDKQDLI 545

Query:   178 SLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGT--- 234
              +E++ G KF   + P  E V   ++      +  V+ E + FF  TA+ LI +  +   
Sbjct:   546 KIEKNCGIKFNMETLPNNEQVFHCASAIASKKVENVNKEILPFFHDTAKELINKSNSLKI 605

Query:   235 DALAAALAQLSGFSRPP--SSRSLINHEQGWVTLQ-LTRDSAFSRGFMSARSVMGFLSDV 291
             D +      L+  ++      RSLIN     VTL  + ++  +S        V    +++
Sbjct:   606 DQIELISRCLAIIAKKEHIKKRSLINGLSETVTLNFINKNRKWSSEADIVYWVNKLSNEL 665

Query:   292 YPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNTISKI 339
                  ++I +I I   DR   + FD+ E +A EL  +      T+SKI
Sbjct:   666 NVNTFNKILQIKIDNKDRAS-SFFDINENLA-ELFLQNF---KTMSKI 708


>UNIPROTKB|Q8I457 [details] [associations]
            symbol:PFE0215w "ATP-dependent helicase, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0006200 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AL844504 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            GO:GO:0020011 KO:K01509 RefSeq:XP_001351602.1
            ProteinModelPortal:Q8I457 EnsemblProtists:PFE0215w:mRNA
            GeneID:812915 KEGG:pfa:PFE0215w EuPathDB:PlasmoDB:PF3D7_0504400
            HOGENOM:HOG000284069 ProtClustDB:CLSZ2431865 Uniprot:Q8I457
        Length = 755

 Score = 465 (168.7 bits), Expect = 1.5e-43, P = 1.5e-43
 Identities = 122/348 (35%), Positives = 193/348 (55%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTT--ATSKRTILSDL 58
             +L+SAT PSW+K +S KYL NP  ID+V + + K A+ IK  AI T      K  +L D+
Sbjct:   367 LLYSATTPSWIKDISSKYLKNPFCIDVVDSSN-KTAKNIKHIAIKTPYDIKEKALLLEDI 425

Query:    59 ITVYAKGGKTIVFTQTKRDADEV-SLALTSIIASEALHGDISQHQRERTLNGFRQGKFTV 117
             I V + GG+ I+FT+TK +AD + S      ++   LHG+I+Q  RE T+  FRQG F +
Sbjct:   426 ILVKSNGGQVIIFTRTKLEADILCSEGSFKSLSFAVLHGNIAQSTREYTMQRFRQGMFQI 485

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             L+ATD+A+RGLDI NVDL+I    PN    ++HR+GRTGRA K+GT+++++++  ++ + 
Sbjct:   486 LIATDIASRGLDISNVDLVIQCFPPNYSAVYIHRAGRTGRANKKGTSLVLYSNEDKQDLI 545

Query:   178 SLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGT--- 234
              +E++ G KF   + P  E V   ++      +  V+ E + FF  TA+ LI +  +   
Sbjct:   546 KIEKNCGIKFNMETLPNNEQVFHCASAIASKKVENVNKEILPFFHDTAKELINKSNSLKI 605

Query:   235 DALAAALAQLSGFSRPP--SSRSLINHEQGWVTLQ-LTRDSAFSRGFMSARSVMGFLSDV 291
             D +      L+  ++      RSLIN     VTL  + ++  +S        V    +++
Sbjct:   606 DQIELISRCLAIIAKKEHIKKRSLINGLSETVTLNFINKNRKWSSEADIVYWVNKLSNEL 665

Query:   292 YPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNTISKI 339
                  ++I +I I   DR   + FD+ E +A EL  +      T+SKI
Sbjct:   666 NVNTFNKILQIKIDNKDRAS-SFFDINENLA-ELFLQNF---KTMSKI 708


>UNIPROTKB|Q5L3G9 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
            binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
            [GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
            OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
            ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
            KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
            BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
        Length = 467

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 90/255 (35%), Positives = 144/255 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSATMP  +++++ ++++ P  + +     E     I+ Y +      K  IL+ L+ 
Sbjct:   179 LLFSATMPDPIRRIAERFMNEPELVKVKAK--EMTVPNIQQYYLEVHEKKKFDILTRLLD 236

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
             + A     IVF +TKR  DE++ AL     A+E +HGD+SQ +R   L  F++G   +LV
Sbjct:   237 IQAPE-LAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEILV 295

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLDI  V  + ++++P DPE++VHR GRTGRAGK G A+   T  +   +  +
Sbjct:   296 ATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFVTPREIGQLHHI 355

Query:   180 ERDVGCKFEFVSPPVVEDVLESSAEQVVATL-NGVHPESVEFFTPTAQRLIEEKGTDALA 238
             ER    K E + PP +++ LE      +  L N V  E++ F+   A+ L+EE  +  + 
Sbjct:   356 ERTTKRKMERMKPPTLDEALEGQQRIAIEKLLNVVETENLSFYKRAAEELLEEHDSVTIV 415

Query:   239 AALAQLSGFSRPPSS 253
             AA  ++   +R P +
Sbjct:   416 AACLKM--LTREPDT 428


>UNIPROTKB|Q73EU1 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
            binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
            [GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
            OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
            RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
            DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
            GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
            Uniprot:Q73EU1
        Length = 525

 Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 85/255 (33%), Positives = 146/255 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSATMP  +++++ +++  P +I +     E     I+ + +      K  +L+ L+ 
Sbjct:   179 LLFSATMPDPIRRIAERFMTEPQHIKVKAK--EVTMPNIQQFYLEVQEKKKFDVLTRLLD 236

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
             + +     IVF +TKR  DE+S AL     A+E +HGD++Q +R   L  F++G   VLV
Sbjct:   237 IQSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLV 295

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLDI  V  + ++++P DPE++VHR GRTGRAGK+G A+L  T  +   ++++
Sbjct:   296 ATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNI 355

Query:   180 ERDVGCKFEFVSPPVVEDVLESSAEQVVATL-NGVHPESVEFFTPTAQRLIEEKGTDALA 238
             ER    K + +  P +++ LE     +   L N +  E++ ++   A+ ++EE   D++ 
Sbjct:   356 ERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQNTIENENLAYYKRIAEEMLEEN--DSVT 413

Query:   239 AALAQLSGFSRPPSS 253
                A L   ++ P +
Sbjct:   414 VVAAALKMMTKEPDT 428


>UNIPROTKB|A0R8U6 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
            "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
            [GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
            ProteinModelPortal:A0R8U6 STRING:A0R8U6
            EnsemblBacteria:EBBACT00000069056 GeneID:4546566
            GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
            HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
            BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
        Length = 528

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 84/255 (32%), Positives = 145/255 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSATMP  +++++ +++  P +I +     E     I+ + +      K  +L+ L+ 
Sbjct:   179 LLFSATMPDPIRRIAERFMTEPQHIKVKAK--EVTMPNIQQFYLEVQEKKKFDVLTRLLD 236

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
             + +     IVF +TKR  DE+S AL     A+E +HGD++Q +R   L  F++G   VLV
Sbjct:   237 IQSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLV 295

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLDI  V  + ++++P DPE++VHR GRTGRAGK+G A+L  T  +   ++++
Sbjct:   296 ATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNI 355

Query:   180 ERDVGCKFEFVSPPVVEDVLESSAEQVVATLNG-VHPESVEFFTPTAQRLIEEKGTDALA 238
             ER    K + +  P +++ LE     +   L   +  E++ ++   A+ ++EE   D++ 
Sbjct:   356 ERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENENLAYYKRIAEEMLEEN--DSVT 413

Query:   239 AALAQLSGFSRPPSS 253
                A L   ++ P +
Sbjct:   414 VVAAALKMMTKEPDT 428


>UNIPROTKB|Q63GX5 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
            "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
            ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
            ProteinModelPortal:Q63GX5 STRING:Q63GX5
            EnsemblBacteria:EBBACT00000041470 GeneID:3022962
            GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
            BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
        Length = 528

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 84/255 (32%), Positives = 145/255 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSATMP  +++++ +++  P +I +     E     I+ + +      K  +L+ L+ 
Sbjct:   179 LLFSATMPDPIRRIAERFMTEPQHIKVKAK--EVTMPNIQQFYLEVQEKKKFDVLTRLLD 236

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
             + +     IVF +TKR  DE+S AL     A+E +HGD++Q +R   L  F++G   VLV
Sbjct:   237 IQSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLV 295

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLDI  V  + ++++P DPE++VHR GRTGRAGK+G A+L  T  +   ++++
Sbjct:   296 ATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNI 355

Query:   180 ERDVGCKFEFVSPPVVEDVLESSAEQVVATLNG-VHPESVEFFTPTAQRLIEEKGTDALA 238
             ER    K + +  P +++ LE     +   L   +  E++ ++   A+ ++EE   D++ 
Sbjct:   356 ERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENENLAYYKRIAEEMLEEN--DSVT 413

Query:   239 AALAQLSGFSRPPSS 253
                A L   ++ P +
Sbjct:   414 VVAAALKMMTKEPDT 428


>UNIPROTKB|Q6HPE6 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:281309 "Bacillus thuringiensis serovar konkukian str.
            97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
            "ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
            ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
            ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
            GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
            PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
        Length = 528

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 84/255 (32%), Positives = 145/255 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSATMP  +++++ +++  P +I +     E     I+ + +      K  +L+ L+ 
Sbjct:   179 LLFSATMPDPIRRIAERFMTEPQHIKVKAK--EVTMPNIQQFYLEVQEKKKFDVLTRLLD 236

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
             + +     IVF +TKR  DE+S AL     A+E +HGD++Q +R   L  F++G   VLV
Sbjct:   237 IQSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLV 295

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLDI  V  + ++++P DPE++VHR GRTGRAGK+G A+L  T  +   ++++
Sbjct:   296 ATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNI 355

Query:   180 ERDVGCKFEFVSPPVVEDVLESSAEQVVATLNG-VHPESVEFFTPTAQRLIEEKGTDALA 238
             ER    K + +  P +++ LE     +   L   +  E++ ++   A+ ++EE   D++ 
Sbjct:   356 ERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENENLAYYKRIAEEMLEEN--DSVT 413

Query:   239 AALAQLSGFSRPPSS 253
                A L   ++ P +
Sbjct:   414 VVAAALKMMTKEPDT 428


>UNIPROTKB|Q81IT9 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
            binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
            [GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
            ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
            STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
            GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
            PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
        Length = 533

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 84/255 (32%), Positives = 145/255 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSATMP  +++++ +++  P +I +     E     I+ + +      K  +L+ L+ 
Sbjct:   179 LLFSATMPDPIRRIAERFMTEPQHIKVKAK--EVTMPNIQQFYLEVQEKKKFDVLTRLLD 236

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
             + +     IVF +TKR  DE+S AL     A+E +HGD++Q +R   L  F++G   VLV
Sbjct:   237 IQSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLV 295

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLDI  V  + ++++P DPE++VHR GRTGRAGK+G A+L  T  +   ++++
Sbjct:   296 ATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNI 355

Query:   180 ERDVGCKFEFVSPPVVEDVLESSAEQVVATLNG-VHPESVEFFTPTAQRLIEEKGTDALA 238
             ER    K + +  P +++ LE     +   L   +  E++ ++   A+ ++EE   D++ 
Sbjct:   356 ERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENENLAYYKRIAEEMLEEN--DSVT 413

Query:   239 AALAQLSGFSRPPSS 253
                A L   ++ P +
Sbjct:   414 VVAAALKMMTKEPDT 428


>UNIPROTKB|Q81VG0 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
            HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
            RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
            HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
            EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
            EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
            GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
            BioCyc:BANT260799:GJAJ-255-MONOMER
            BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
        Length = 528

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 84/255 (32%), Positives = 145/255 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSATMP  +++++ +++  P +I +     E     I+ + +      K  +L+ L+ 
Sbjct:   179 LLFSATMPDPIRRIAERFMTEPQHIKVKAK--EVTMPNIQQFYLEVQEKKKFDVLTRLLD 236

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
             + +     IVF +TKR  DE+S AL     A+E +HGD++Q +R   L  F++G   VLV
Sbjct:   237 IQSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLV 295

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLDI  V  + ++++P DPE++VHR GRTGRAGK+G A+L  T  +   ++++
Sbjct:   296 ATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNI 355

Query:   180 ERDVGCKFEFVSPPVVEDVLESSAEQVVATLNG-VHPESVEFFTPTAQRLIEEKGTDALA 238
             ER    K + +  P +++ LE     +   L   +  E++ ++   A+ ++EE   D++ 
Sbjct:   356 ERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENENLAYYKRIAEEMLEEN--DSVT 413

Query:   239 AALAQLSGFSRPPSS 253
                A L   ++ P +
Sbjct:   414 VVAAALKMMTKEPDT 428


>TIGR_CMR|BA_0247 [details] [associations]
            symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
            GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
            GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
            HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
            RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
            HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
            EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
            EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
            GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
            BioCyc:BANT260799:GJAJ-255-MONOMER
            BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
        Length = 528

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 84/255 (32%), Positives = 145/255 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSATMP  +++++ +++  P +I +     E     I+ + +      K  +L+ L+ 
Sbjct:   179 LLFSATMPDPIRRIAERFMTEPQHIKVKAK--EVTMPNIQQFYLEVQEKKKFDVLTRLLD 236

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
             + +     IVF +TKR  DE+S AL     A+E +HGD++Q +R   L  F++G   VLV
Sbjct:   237 IQSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLV 295

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLDI  V  + ++++P DPE++VHR GRTGRAGK+G A+L  T  +   ++++
Sbjct:   296 ATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNI 355

Query:   180 ERDVGCKFEFVSPPVVEDVLESSAEQVVATLNG-VHPESVEFFTPTAQRLIEEKGTDALA 238
             ER    K + +  P +++ LE     +   L   +  E++ ++   A+ ++EE   D++ 
Sbjct:   356 ERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENENLAYYKRIAEEMLEEN--DSVT 413

Query:   239 AALAQLSGFSRPPSS 253
                A L   ++ P +
Sbjct:   414 VVAAALKMMTKEPDT 428


>UNIPROTKB|Q4K8U0 [details] [associations]
            symbol:deaD "Cold-shock DEAD box protein A" species:220664
            "Pseudomonas protegens Pf-5" [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0006950 "response to stress"
            evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006950
            GO:GO:0006355 GO:GO:0003723 EMBL:CP000076 GenomeReviews:CP000076_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
            OMA:LPQGMPK RefSeq:YP_261343.1 ProteinModelPortal:Q4K8U0
            GeneID:3477377 KEGG:pfl:PFL_4251 PATRIC:19877913
            ProtClustDB:CLSK867560 BioCyc:PFLU220664:GIX8-4286-MONOMER
            Uniprot:Q4K8U0
        Length = 557

 Score = 344 (126.2 bits), Expect = 4.5e-34, Sum P(2) = 4.5e-34
 Identities = 82/244 (33%), Positives = 143/244 (58%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSAT+P  ++ ++ ++L +P ++ +        A  I+   +   A  K + +  L+ 
Sbjct:   184 VLFSATLPQSIRAIAERHLKDPKHVKIQSKTQTVTA--IEQAHLLVHADQKTSAVLSLLE 241

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
             V       I+F +TK+   +++ AL +    + AL+GDI+Q+QRER ++  + G+  ++V
Sbjct:   242 V-EDFDALIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVV 300

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLD+P +  + + ++P DPE++VHR GRTGRAG+EG A+L+ T  +RR ++ +
Sbjct:   301 ATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVI 360

Query:   180 ERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGTD--AL 237
             ER  G K   V  P  + VL++  +++  +L+ +  ++         RL  + G    AL
Sbjct:   361 ERVTGQKVAEVRLPDAQAVLDARIKKLTNSLSPLVADAEATHGDLLDRLTADIGCSPRAL 420

Query:   238 AAAL 241
             AAAL
Sbjct:   421 AAAL 424

 Score = 50 (22.7 bits), Expect = 4.5e-34, Sum P(2) = 4.5e-34
 Identities = 19/79 (24%), Positives = 39/79 (49%)

Query:   270 RDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQ 329
             R +  +R  ++A++++G + +    A + IG+I +    R   ++ +LPE+    LL K 
Sbjct:   484 RTALGARDGIAAKNLLGAILNEGGLAREAIGRIQV----RDSFSLVELPEDGLDRLLTK- 538

Query:   330 IPPGNTISKITKLPALQDD 348
             +       K  KL   ++D
Sbjct:   539 LKDTRVAGKQLKLRRYRED 557


>UNIPROTKB|Q65N62 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
            [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
            evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
            HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
            EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
            ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
            EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
            GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
            GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
            PATRIC:18946609 ProtClustDB:CLSK886742
            BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
        Length = 487

 Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
 Identities = 82/255 (32%), Positives = 144/255 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSATMP+ +K+++ +++ NP ++ +     E     I+ + +      K   L+ L+ 
Sbjct:   180 LLFSATMPAPIKRIAERFMTNPEHVKVKAK--EMTVSNIQQFYLEVHERKKFDTLTRLLD 237

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
             + +     IVF +TKR  DE++ AL      +E +HGD++Q +R   L  F+QG   VLV
Sbjct:   238 IQSPE-LAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEVLV 296

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLDI  V  + ++++P DPE++VHR GRTGRAGK G A+   T  ++  +R++
Sbjct:   297 ATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKDMLRAI 356

Query:   180 ERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPES-VEFFTPTAQRLIEEKGTDALA 238
             E+    K + +  P +++ +E   +  V  +  +  E+ + F+   A  L+E+   D++ 
Sbjct:   357 EQTTKRKMDRMKAPTLDEAIEGQQQVTVDRIRTIIEENNLNFYMTAAAELLEDH--DSVT 414

Query:   239 AALAQLSGFSRPPSS 253
                A +   ++ P +
Sbjct:   415 VVAAAIKMMTKEPDN 429


>UNIPROTKB|P96614 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:224308 "Bacillus subtilis subsp. subtilis str. 168"
            [GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
            "response to cold" evidence=IGI] [GO:0010501 "RNA secondary
            structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
            evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
            GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
            HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
            EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
            ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
            EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
            PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
            GO:GO:0010501 Uniprot:P96614
        Length = 494

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 84/253 (33%), Positives = 142/253 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSATMP+ +K+++ +++  P ++ +     E     I+ + +      K   L+ L+ 
Sbjct:   180 LLFSATMPAPIKRIAERFMTEPEHVKVKAK--EMTVSNIQQFYLEVQERKKFDTLTRLLD 237

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
             + +     IVF +TKR  DE++ AL     A+E +HGD++Q +R   L  F++G   VLV
Sbjct:   238 IQSPE-LAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEVLV 296

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLDI  V  + ++++P DPE++VHR GRTGRAGK G A+   T  ++  +R++
Sbjct:   297 ATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKSMLRAI 356

Query:   180 ERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPES-VEFFTPTAQRLIEEKGTDALA 238
             E+    K + +  P +++ LE   +  V  L     E+ + F+   A  L+E+   DA+ 
Sbjct:   357 EQTTKRKMDRMKEPTLDEALEGQQQVTVERLRTTISENNLNFYMTAAAELLEDH--DAVT 414

Query:   239 AALAQLSGFSRPP 251
                A +   ++ P
Sbjct:   415 VVAAAIKMATKEP 427


>UNIPROTKB|Q3AFI3 [details] [associations]
            symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
            family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
            ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
            KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
            BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
        Length = 430

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 89/249 (35%), Positives = 144/249 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSAT+P+ +K + +K+L     + LVG   EK    I+        T K   L  ++ 
Sbjct:   178 LLFSATLPAPIKTIIKKFLGGYKTVKLVGR--EKTVPAIRQVYYELPETEKIEGLVSILN 235

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                   + IVF +TK+  DEV   L     A++ LHGD+SQ +R +T+  F+ GK  +LV
Sbjct:   236 SELPI-QAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLV 294

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLDIP+V  +I++++P +PE+++HR GRTGRAG+EG AI +    +R+ ++++
Sbjct:   295 ATDVAARGLDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLLKAI 354

Query:   180 ERDVG--CKFEFVSPPV-VEDV-LESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGTD 235
             E  +    K E +  PV +E+   +  A++++ T+    P     +   A RL+EE+ ++
Sbjct:   355 EEAINKRLKREILPEPVDLEEARFKKIAKKILDTITKGVPA---LYLEMAARLLEEEESE 411

Query:   236 ALAAALAQL 244
              L  A   L
Sbjct:   412 QLLGATLYL 420


>TIGR_CMR|CHY_0229 [details] [associations]
            symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
            family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
            ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
            KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
            BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
        Length = 430

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 89/249 (35%), Positives = 144/249 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSAT+P+ +K + +K+L     + LVG   EK    I+        T K   L  ++ 
Sbjct:   178 LLFSATLPAPIKTIIKKFLGGYKTVKLVGR--EKTVPAIRQVYYELPETEKIEGLVSILN 235

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                   + IVF +TK+  DEV   L     A++ LHGD+SQ +R +T+  F+ GK  +LV
Sbjct:   236 SELPI-QAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLV 294

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLDIP+V  +I++++P +PE+++HR GRTGRAG+EG AI +    +R+ ++++
Sbjct:   295 ATDVAARGLDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLLKAI 354

Query:   180 ERDVG--CKFEFVSPPV-VEDV-LESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGTD 235
             E  +    K E +  PV +E+   +  A++++ T+    P     +   A RL+EE+ ++
Sbjct:   355 EEAINKRLKREILPEPVDLEEARFKKIAKKILDTITKGVPA---LYLEMAARLLEEEESE 411

Query:   236 ALAAALAQL 244
              L  A   L
Sbjct:   412 QLLGATLYL 420


>TIGR_CMR|SO_4034 [details] [associations]
            symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
            acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
            Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
            ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
            PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
        Length = 623

 Score = 367 (134.2 bits), Expect = 3.6e-33, P = 3.6e-33
 Identities = 91/256 (35%), Positives = 137/256 (53%)

Query:     2 LFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITV 61
             LFSATMP  +K+++ K+L N  NI +  +      + I+   +  +  +K   L  ++ V
Sbjct:   184 LFSATMPEQIKRVANKHLKNATNISIAASHTT--VDSIEQRFVQVSQHNKLEALVRVLEV 241

Query:    62 YAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVA 120
                 G  I+F +T+    E++  L +   AS  LHGD++Q  RER +   + GK  +L+A
Sbjct:   242 ENTEG-IIIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAVEQLKNGKLDILIA 300

Query:   121 TDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 180
             TDVAARGLD+  +  +++Y++P D E +VHR GRTGRAG+ G AIL  TS + R +R++E
Sbjct:   301 TDVAARGLDVERIGHVVNYDIPYDTEAYVHRIGRTGRAGRTGMAILFVTSREMRMLRTIE 360

Query:   181 RDVGCKFEFVSPPVVEDVLESS----AEQVVATLNGVHPESVEFFTPTAQRLIE--EKGT 234
             R    +   +  P  E V E       EQ+  T+N      +EF      +L +  E  T
Sbjct:   361 RATNSRISPMKVPSPETVAERRLSRLGEQLAQTMNN----DLEFMREAVAQLCQQLEVDT 416

Query:   235 DALAAALAQLSGFSRP 250
             D LAAAL       RP
Sbjct:   417 DLLAAALLHQVQQERP 432


>UNIPROTKB|F1NJ30 [details] [associations]
            symbol:DDX21 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR012562 Pfam:PF00271 Pfam:PF08152
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003723 GO:GO:0004386 GeneTree:ENSGT00680000100003
            EMBL:AADN02028008 IPI:IPI00593310 ProteinModelPortal:F1NJ30
            Ensembl:ENSGALT00000040804 ArrayExpress:F1NJ30 Uniprot:F1NJ30
        Length = 271

 Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
 Identities = 72/161 (44%), Positives = 104/161 (64%)

Query:   109 GFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMF 168
             GFR G F VL+AT+VAARGLDIP VDL+I    P D ++++HRSGRTGRAG+ G  I  +
Sbjct:     2 GFRNGVFEVLIATNVAARGLDIPEVDLVIQCSPPKDVDSYIHRSGRTGRAGRTGICICFY 61

Query:   169 TSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRL 228
                +   ++ +E+  G  F  +  P   D++++S++     L+ V P ++++F  +A+ L
Sbjct:    62 QRKEEDLLKQVEQKAGITFRRIGVPSATDIIKASSDDAKKCLDAVPPSAIDYFRQSAREL 121

Query:   229 IEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVTLQL 268
             IEEKG  DALAAALA +SG S     RSL+N   G+VT+ L
Sbjct:   122 IEEKGAVDALAAALAHISGASSI-QQRSLLNSTAGFVTMVL 161


>UNIPROTKB|Q9KLE2 [details] [associations]
            symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
            species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
            [GO:0000910 "cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=ISS] [GO:0016070 "RNA metabolic
            process" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
            Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
            ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
            KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
            Uniprot:Q9KLE2
        Length = 663

 Score = 353 (129.3 bits), Expect = 1.6e-31, P = 1.6e-31
 Identities = 89/254 (35%), Positives = 145/254 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSATMP  VK++  ++L NP  +D+ G+ ++ +A+  + Y +      K   ++ L+ 
Sbjct:   204 VLFSATMPPMVKEIVERFLRNPECVDVAGS-NQTVAKVEQQYWV-VKGVEKDEAMARLLE 261

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                +   +IVF +T++D + ++  L +    + ALHGDI Q  RERT++  +QG   +LV
Sbjct:   262 T-EETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDILV 320

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDV ARGLD+P +  + +Y++P D E+++HR GRTGRAG++G AIL+  ++Q R +R++
Sbjct:   321 ATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRTI 380

Query:   180 ERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHP-ESVEFFTPTAQRLIEEKGTDA-- 236
             ER      E +  P  + V ES   ++   L       S+E F    ++L      DA  
Sbjct:   381 ERVTRSSMEEIQLPHRDKVAESRLTKLGQELAADKEFSSLERFADLVEKLQASLEIDATT 440

Query:   237 LAAALAQLSGFSRP 250
             LAA L +     RP
Sbjct:   441 LAAILLKRQQGKRP 454


>TIGR_CMR|VC_A0804 [details] [associations]
            symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
            species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000910
            "cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0016070 "RNA metabolic process"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
            Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
            ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
            KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
            Uniprot:Q9KLE2
        Length = 663

 Score = 353 (129.3 bits), Expect = 1.6e-31, P = 1.6e-31
 Identities = 89/254 (35%), Positives = 145/254 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSATMP  VK++  ++L NP  +D+ G+ ++ +A+  + Y +      K   ++ L+ 
Sbjct:   204 VLFSATMPPMVKEIVERFLRNPECVDVAGS-NQTVAKVEQQYWV-VKGVEKDEAMARLLE 261

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                +   +IVF +T++D + ++  L +    + ALHGDI Q  RERT++  +QG   +LV
Sbjct:   262 T-EETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDILV 320

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDV ARGLD+P +  + +Y++P D E+++HR GRTGRAG++G AIL+  ++Q R +R++
Sbjct:   321 ATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRTI 380

Query:   180 ERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHP-ESVEFFTPTAQRLIEEKGTDA-- 236
             ER      E +  P  + V ES   ++   L       S+E F    ++L      DA  
Sbjct:   381 ERVTRSSMEEIQLPHRDKVAESRLTKLGQELAADKEFSSLERFADLVEKLQASLEIDATT 440

Query:   237 LAAALAQLSGFSRP 250
             LAA L +     RP
Sbjct:   441 LAAILLKRQQGKRP 454


>ASPGD|ASPL0000077157 [details] [associations]
            symbol:AN10557 species:162425 "Emericella nidulans"
            [GO:0071470 "cellular response to osmotic stress" evidence=IEA]
            [GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
            [GO:0031137 "regulation of conjugation with cellular fusion"
            evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
            evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
            [GO:0010628 "positive regulation of gene expression" evidence=IEA]
            [GO:0097308 "cellular response to farnesol" evidence=IEP]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IEA] [GO:0033592 "RNA strand annealing activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
            PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
        Length = 668

 Score = 345 (126.5 bits), Expect = 1.2e-30, P = 1.2e-30
 Identities = 75/182 (41%), Positives = 111/182 (60%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             ++FSAT P  ++ L+R +L +   L++  VG+  E + + ++ Y        KR++L D+
Sbjct:   384 LMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVE-YVEDH---DKRSVLLDI 439

Query:    59 ITVYAKGGKTIVFTQTKRDADEVS-LALTSIIASEALHGDISQHQRERTLNGFRQGKFTV 117
             +  +   G T++F +TKR AD +S   +     + A+HGD +Q +RER L  FR G++ +
Sbjct:   440 LHTHGTTGLTLIFVETKRMADALSEFLINQRFPATAIHGDRTQRERERALEMFRSGRYPI 499

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             LVAT VAARGLDIPNV  +I+Y+LP D + +VHR GRTGRAG  G A   F    R  VR
Sbjct:   500 LVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGNRGVVR 559

Query:   178 SL 179
              L
Sbjct:   560 DL 561


>SGD|S000005730 [details] [associations]
            symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
            helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
            "translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
            [GO:0033592 "RNA strand annealing activity" evidence=IDA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
            EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
            EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
            RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
            DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
            PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
            GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
            KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
            GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
        Length = 604

 Score = 337 (123.7 bits), Expect = 6.3e-30, P = 6.3e-30
 Identities = 80/206 (38%), Positives = 127/206 (61%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             ++FSAT P+ ++ L+R +L +   L++  VG+  E + + + LY  +     K++ L DL
Sbjct:   338 LMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKV-LYVENQ---DKKSALLDL 393

Query:    59 ITVYAKGGKTIVFTQTKRDADEVS--LALTSIIASEALHGDISQHQRERTLNGFRQGKFT 116
             ++  +  G T++F +TKR AD+++  L + +  A+ A+HGD +Q +RER L  FR G  T
Sbjct:   394 LSA-STDGLTLIFVETKRMADQLTDFLIMQNFRAT-AIHGDRTQSERERALAAFRSGAAT 451

Query:   117 VLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTV 176
             +LVAT VAARGLDIPNV  +I+Y+LP+D + +VHR GRTGRAG  G A   F S     V
Sbjct:   452 LLVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSENSNIV 511

Query:   177 RSLERDVGCKFEFVSPPVVEDVLESS 202
             + L  ++  +     P  ++D + S+
Sbjct:   512 KGLH-EILTEANQEVPSFLKDAMMSA 536


>SGD|S000006040 [details] [associations]
            symbol:DBP1 "Putative ATP-dependent RNA helicase of the
            DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
            [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
            "translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
            helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
            "translation initiation factor activity" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
            GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
            SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
            STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
            KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
            HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
            NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
            Uniprot:P24784
        Length = 617

 Score = 335 (123.0 bits), Expect = 1.1e-29, P = 1.1e-29
 Identities = 78/183 (42%), Positives = 117/183 (63%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             ++FSAT P  ++ L+R +LDN   L++  VG+  E + + I LY        K++ L DL
Sbjct:   350 LMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRI-LYVDDM---DKKSALLDL 405

Query:    59 ITVYAKGGKTIVFTQTKRDADEVS--LALTSIIASEALHGDISQHQRERTLNGFRQGKFT 116
             ++   KG  T++F +TKR AD+++  L + +  A+ A+HGD +Q +RER L+ F+     
Sbjct:   406 LSAEHKG-LTLIFVETKRMADQLTDFLIMQNFKAT-AIHGDRTQAERERALSAFKANVAD 463

Query:   117 VLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTV 176
             +LVAT VAARGLDIPNV  +I+Y+LP+D + +VHR GRTGRAG  G A   F S+ +  V
Sbjct:   464 ILVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRIGRTGRAGNTGVATSFFNSNNQNIV 523

Query:   177 RSL 179
             + L
Sbjct:   524 KGL 526


>UNIPROTKB|Q11039 [details] [associations]
            symbol:deaD "Cold-shock DEAD box protein A homolog"
            species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
            evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005618
            GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
            GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006351 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
            PIR:E70752 RefSeq:NP_215769.1 RefSeq:NP_335736.1
            RefSeq:YP_006514628.1 ProteinModelPortal:Q11039 SMR:Q11039
            PRIDE:Q11039 EnsemblBacteria:EBMYCT00000002426
            EnsemblBacteria:EBMYCT00000070115 GeneID:13319832 GeneID:887069
            GeneID:924778 KEGG:mtc:MT1292 KEGG:mtu:Rv1253 KEGG:mtv:RVBD_1253
            PATRIC:18124606 TubercuList:Rv1253 OMA:LPQGMPK
            ProtClustDB:CLSK791051 Uniprot:Q11039
        Length = 563

 Score = 332 (121.9 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 81/232 (34%), Positives = 128/232 (55%)

Query:     2 LFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITV 61
             LFSATMP  ++KLS KYL +P  +         +AE I    I      K   L+ ++ V
Sbjct:   192 LFSATMPPAIRKLSAKYLHDPFEVTCKAKT--AVAENISQSYIQVAR--KMDALTRVLEV 247

Query:    62 YAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVA 120
                    IVF +TK+  +E++  L +   ++ A+ GD+ Q QRERT+   R G   +LVA
Sbjct:   248 EPFEAM-IVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILVA 306

Query:   121 TDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 180
             TDVAARGLD+  +  +++Y++P+D E++VHR GRTGRAG+ G A++  +  +   ++++E
Sbjct:   307 TDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVSPRELHLLKAIE 366

Query:   181 RDVGCKFEFVSPPVVEDV-LESSAEQVVATLNGVHPESVEFFTPTAQRLIEE 231
             +           P VEDV  +  A+   +  N +    +E F    +RL+EE
Sbjct:   367 KATRQTLTEAQLPTVEDVNTQRVAKFADSITNALGGPGIELF----RRLVEE 414


>SGD|S000001107 [details] [associations]
            symbol:RRP3 "Protein involved in rRNA processing"
            species:4932 "Saccharomyces cerevisiae" [GO:0042254 "ribosome
            biogenesis" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000462 "maturation of
            SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
            LSU-rRNA)" evidence=IMP] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
            evidence=IDA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IC] [GO:0006364 "rRNA processing"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 SGD:S000001107 GO:GO:0005524
            GO:GO:0005730 EMBL:BK006934 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 EMBL:U00061 HOGENOM:HOG000268802
            GO:GO:0000462 GeneTree:ENSGT00670000098028 KO:K14777 OMA:IFIPSKF
            OrthoDB:EOG4ZPJ3P EMBL:AY389302 EMBL:AY389303 PIR:S46713
            RefSeq:NP_011932.2 ProteinModelPortal:P38712 SMR:P38712
            DIP:DIP-6533N IntAct:P38712 MINT:MINT-518716 STRING:P38712
            PaxDb:P38712 PeptideAtlas:P38712 EnsemblFungi:YHR065C GeneID:856462
            KEGG:sce:YHR065C CYGD:YHR065c NextBio:982111 Genevestigator:P38712
            GermOnline:YHR065C Uniprot:P38712
        Length = 501

 Score = 329 (120.9 bits), Expect = 1.7e-29, P = 1.7e-29
 Identities = 81/225 (36%), Positives = 136/225 (60%)

Query:     2 LFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITV 61
             LFSATM S + KL R  L NP+    V N+ + +   ++   +      K T L  L+  
Sbjct:   261 LFSATMTSKIDKLQRASLTNPVKC-AVSNKYQTVDTLVQTLMV-VPGGLKNTYLIYLLNE 318

Query:    62 YAKGGKT-IVFTQTKRDADEVSLALTSII--ASEALHGDISQHQRERTLNGFRQGKFTVL 118
             +   GKT I+FT+TK +A+ +S  L +++  ++ ALHGD++Q+QR  +L+ F+ GK ++L
Sbjct:   319 FI--GKTMIIFTRTKANAERLS-GLCNLLEFSATALHGDLNQNQRMGSLDLFKAGKRSIL 375

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             VATDVAARGLDIP+VD++++Y++P D ++++HR GRT RAG+ G +I + +      +  
Sbjct:   376 VATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILR 435

Query:   179 LERDVGCKF--EFVSPPVV---EDVLESSAEQVVATLNGVHPESV 218
             +E  +G K   E V   ++    D ++ +  +VV  +N  + E +
Sbjct:   436 IEEVLGKKLPKESVDKNIILTLRDSVDKANGEVVMEMNRRNKEKI 480


>UNIPROTKB|Q81JK1 [details] [associations]
            symbol:BAS5307 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:1392 "Bacillus anthracis" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
            InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
            RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
            SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
            EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
            EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
            GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
            ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
            BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
        Length = 481

 Score = 327 (120.2 bits), Expect = 1.8e-29, P = 1.8e-29
 Identities = 74/206 (35%), Positives = 119/206 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDL--VGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             MLFSAT+P  V++LSR Y++ P +I++   G   +K+     L+ +      K ++L D+
Sbjct:   181 MLFSATLPEDVERLSRTYMNAPTHIEIKAAGITTDKIEH--TLFEVREE--EKLSLLKDV 236

Query:    59 ITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
              T+       I+F +T+ + D V   L  +    + +HG + Q  R   ++ FR+GKF  
Sbjct:   237 TTI-ENPDSCIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGKFRY 295

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             LVATDVAARG+DI N+  +I+Y++P + E++VHR+GRTGRAG  G AI   T  + R + 
Sbjct:   296 LVATDVAARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGNSGKAITFITPYEDRFLE 355

Query:   178 SLERDVGCKFEFVSPPVVEDVLESSA 203
              +E  +G      + P  E+V++  A
Sbjct:   356 EIEAYIGFAIPKANAPSKEEVMKGKA 381


>TIGR_CMR|BA_5703 [details] [associations]
            symbol:BA_5703 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
            InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
            RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
            SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
            EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
            EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
            GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
            ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
            BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
        Length = 481

 Score = 327 (120.2 bits), Expect = 1.8e-29, P = 1.8e-29
 Identities = 74/206 (35%), Positives = 119/206 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDL--VGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             MLFSAT+P  V++LSR Y++ P +I++   G   +K+     L+ +      K ++L D+
Sbjct:   181 MLFSATLPEDVERLSRTYMNAPTHIEIKAAGITTDKIEH--TLFEVREE--EKLSLLKDV 236

Query:    59 ITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
              T+       I+F +T+ + D V   L  +    + +HG + Q  R   ++ FR+GKF  
Sbjct:   237 TTI-ENPDSCIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGKFRY 295

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             LVATDVAARG+DI N+  +I+Y++P + E++VHR+GRTGRAG  G AI   T  + R + 
Sbjct:   296 LVATDVAARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGNSGKAITFITPYEDRFLE 355

Query:   178 SLERDVGCKFEFVSPPVVEDVLESSA 203
              +E  +G      + P  E+V++  A
Sbjct:   356 EIEAYIGFAIPKANAPSKEEVMKGKA 381


>TIGR_CMR|SPO_1443 [details] [associations]
            symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
            species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
            GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
            ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
            PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
        Length = 471

 Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
 Identities = 73/190 (38%), Positives = 114/190 (60%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLV--GNQDEKLAEGIKLYAISTT---ATSKRTIL 55
             + FSATM   +++++  +L  P  I++       E + +G+ L+  S     A+ KR +L
Sbjct:   182 LFFSATMAPEIERITNTFLSAPARIEVARQATASETIEQGVVLFKGSRRDREASEKRAVL 241

Query:    56 SDLITVYAKGGK---TIVFTQTKRDADEVSLALTSIIASEA-LHGDISQHQRERTLNGFR 111
               LI   A+G K    I+F   K D D V+ +L       A +HGD+ Q QR RTL+GFR
Sbjct:   242 RALID--AEGEKCTNAIIFCNRKTDVDIVAKSLQKYGYDAAPIHGDLDQSQRTRTLDGFR 299

Query:   112 QGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSS 171
             +GK  +LVA+DVAARGLD+P+V  + ++++P  PE +VHR GRTGRAG++G AI +    
Sbjct:   300 EGKLRLLVASDVAARGLDVPSVSHVFNFDVPGHPEDYVHRIGRTGRAGRDGKAITLCIPR 359

Query:   172 QRRTVRSLER 181
               + + ++E+
Sbjct:   360 DEKALDAIEK 369


>CGD|CAL0004832 [details] [associations]
            symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
            "cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
            evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
            [GO:0071470 "cellular response to osmotic stress" evidence=IEA]
            [GO:0031137 "regulation of conjugation with cellular fusion"
            evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
            evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
            ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
            KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
        Length = 672

 Score = 332 (121.9 bits), Expect = 3.2e-29, P = 3.2e-29
 Identities = 76/182 (41%), Positives = 114/182 (62%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             ++FSAT P  ++ L+R +L +   L++  VG+  E + + I LY        K++++ DL
Sbjct:   382 LMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKI-LYVEDD---EKKSVILDL 437

Query:    59 ITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
             ++   + G TIVFT+TKR AD ++  L      + A+HGD SQ++RE+ L  F+ G   +
Sbjct:   438 LSAN-ENGLTIVFTETKRMADNLADYLYDQGFPATAIHGDRSQYEREKALAAFKNGAAPI 496

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             LVAT VAARGLDIPNV  +I+Y+LP+D + +VHR GRTGRAG  G A   F  + +  V+
Sbjct:   497 LVATAVAARGLDIPNVSHVINYDLPSDIDDYVHRIGRTGRAGNVGIATAFFNRNNKNVVK 556

Query:   178 SL 179
              L
Sbjct:   557 GL 558


>TIGR_CMR|CPS_1590 [details] [associations]
            symbol:CPS_1590 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_268332.1 ProteinModelPortal:Q485D3
            STRING:Q485D3 GeneID:3522084 KEGG:cps:CPS_1590 PATRIC:21466379
            OMA:AISECGY ProtClustDB:CLSK768209
            BioCyc:CPSY167879:GI48-1671-MONOMER Uniprot:Q485D3
        Length = 455

 Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
 Identities = 83/208 (39%), Positives = 121/208 (58%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             ++FSAT    VK L+ + L +P  I +  +++   +  IK      T   KR +LS+LI 
Sbjct:   200 LMFSATFSDRVKSLANQLLKSPKTISV--SKENTTSGKIKQAVYWVTEERKRELLSELIG 257

Query:    61 VYAKGGKTIVFTQTKRDADEVS--LALTSIIASEALHGDISQHQRERTLNGFRQGKFTVL 118
             V     + +VF  TK  A+ ++  L L  I A+   HGD +Q  R + L  F +GK  VL
Sbjct:   258 VN-NWQQVLVFAGTKESANTLAKELKLDGIKAA-LCHGDKTQGARNKALEQFSEGKVRVL 315

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             VATDVAARGLDIP++  ++++ LP  PE +VHR GRTGRAGK GTAI + +    R + +
Sbjct:   316 VATDVAARGLDIPDLAFVVNFHLPFLPEDYVHRVGRTGRAGKSGTAISLVSPKDERFLEN 375

Query:   179 LERDVGCKFEFVSPPVVE-DVLESSAEQ 205
             +E+ +  KFE +  P  E + LE+S  Q
Sbjct:   376 IEQLIERKFERIVAPGYEFNRLEASEYQ 403


>TAIR|locus:2222617 [details] [associations]
            symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
            "plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
            wall modification" evidence=RCA] InterPro:IPR000629
            InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
            PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
            SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
            Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
            ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
            EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
            OMA:YLIPGFM Uniprot:F4K6V1
        Length = 712

 Score = 330 (121.2 bits), Expect = 6.3e-29, P = 6.3e-29
 Identities = 74/197 (37%), Positives = 110/197 (55%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTAT-SKRTILSDLI 59
             ++++AT P  V+K++   L NP  ++ +GN DE +A       I   A   K + L  ++
Sbjct:   410 LMYTATWPKEVRKIAADLLVNPAQVN-IGNVDELVANKSITQTIEVLAPMEKHSRLEQIL 468

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                  G K I+F  TKR  D+++  LT    + A+HGD SQ +R+  LN FR G+  VLV
Sbjct:   469 RSQEPGSKIIIFCSTKRMCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLV 528

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLD+ ++ ++++Y+ PN  E +VHR GRTGRAG  G A   F     +    L
Sbjct:   529 ATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASDL 588

Query:   180 ERDVGCKFEFVSPPVVE 196
              + +    + V P V E
Sbjct:   589 IKILEGANQKVPPQVRE 605


>TAIR|locus:2084178 [details] [associations]
            symbol:DRH1 "DEAD box RNA helicase 1" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
            PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
            SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
            EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
            EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
            EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
            PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
            RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
            ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
            PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
            EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
            KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
            OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
            Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
        Length = 619

 Score = 328 (120.5 bits), Expect = 6.7e-29, P = 6.7e-29
 Identities = 73/197 (37%), Positives = 109/197 (55%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTAT-SKRTILSDLI 59
             ++++AT P  V+K++   L NP  ++ +GN DE +A       I   A   K+  L  ++
Sbjct:   339 LMYTATWPKGVRKIAADLLVNPAQVN-IGNVDELVANKSITQHIEVVAPMEKQRRLEQIL 397

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                  G K I+F  TKR  D+++  LT    + A+HGD SQ +R+  LN FR G+  VLV
Sbjct:   398 RSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLV 457

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLD+ ++  +++Y+ PN  E +VHR GRTGRAG  G A   F     +    L
Sbjct:   458 ATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDL 517

Query:   180 ERDVGCKFEFVSPPVVE 196
              + +    + V P + E
Sbjct:   518 IKILEGANQRVPPQIRE 534


>TIGR_CMR|CPS_1726 [details] [associations]
            symbol:CPS_1726 "RNA helicase DeaD" species:167879
            "Colwellia psychrerythraea 34H" [GO:0003724 "RNA helicase activity"
            evidence=ISS] [GO:0009409 "response to cold" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
            GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
            Pfam:PF03880 RefSeq:YP_268464.1 ProteinModelPortal:Q484Q1
            STRING:Q484Q1 GeneID:3523325 KEGG:cps:CPS_1726 PATRIC:21466621
            OMA:WIVKGVE ProtClustDB:CLSK741103
            BioCyc:CPSY167879:GI48-1803-MONOMER Uniprot:Q484Q1
        Length = 611

 Score = 327 (120.2 bits), Expect = 8.2e-29, P = 8.2e-29
 Identities = 71/181 (39%), Positives = 110/181 (60%)

Query:     2 LFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITV 61
             LFSATMP  ++K++ ++L +P +I +   +  K    I  YA   +  +K T L  +  V
Sbjct:   194 LFSATMPPAIRKIANRFLKDPEHIKVAAVKKAKA--NITQYAWKVSGITKMTALERIAEV 251

Query:    62 YAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVA 120
               +    I+F +T+ D  +++  L      + AL+GD++Q QRER ++  + GK ++LVA
Sbjct:   252 -VEYDAMIIFVRTRNDTVDIAEKLERAGYPALALNGDLNQAQRERCIDQMKSGKSSILVA 310

Query:   121 TDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 180
             TDV ARGLDIP + L+I+Y+LP D E +VHR GRTGRAG+EG +I      +  ++R  E
Sbjct:   311 TDVVARGLDIPRISLVINYDLPGDNEAYVHRIGRTGRAGREGMSIAFVRPREMYSIRHYE 370

Query:   181 R 181
             R
Sbjct:   371 R 371


>POMBASE|SPCC1795.11 [details] [associations]
            symbol:sum3 "translation initiation RNA helicase Sum3"
            species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
            translational initiation" evidence=IMP] [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
            "regulation of mitotic cell cycle" evidence=IMP] [GO:0010628
            "positive regulation of gene expression" evidence=IMP] [GO:0031047
            "gene silencing by RNA" evidence=IDA] [GO:0031137 "regulation of
            conjugation with cellular fusion" evidence=IGI] [GO:0071470
            "cellular response to osmotic stress" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 PomBase:SPCC1795.11 GO:GO:0005829 GO:GO:0005524
            GO:GO:0007346 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
            GenomeReviews:CU329672_GR GO:GO:0071470 GO:GO:0010628 GO:GO:0031047
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 GO:GO:0031137 InterPro:IPR014014 PROSITE:PS51195
            GO:GO:0002183 HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4
            OMA:KYERGGN EMBL:AF025536 EMBL:AF084222 EMBL:AB012389 EMBL:AJ237697
            EMBL:AB027871 PIR:T43543 RefSeq:NP_588033.1
            ProteinModelPortal:O13370 SMR:O13370 IntAct:O13370
            MINT:MINT-4666622 STRING:O13370 PRIDE:O13370
            EnsemblFungi:SPCC1795.11.1 GeneID:2538689 KEGG:spo:SPCC1795.11
            NextBio:20799875 Uniprot:O13370
        Length = 636

 Score = 324 (119.1 bits), Expect = 2.0e-28, P = 2.0e-28
 Identities = 69/182 (37%), Positives = 111/182 (60%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             ++FSAT P  ++ L+R +L +   L++  VG+  E + + +    +    + KR+ L D+
Sbjct:   368 LMFSATFPRDIQLLARDFLKDYVFLSVGRVGSTSENITQKV----VHVEDSEKRSYLLDI 423

Query:    59 ITVYAKGGKTIVFTQTKRDADEVS-LALTSIIASEALHGDISQHQRERTLNGFRQGKFTV 117
             +      G T++F +TKR AD ++   L S   + ++HGD +Q +RER L  FR G+ ++
Sbjct:   424 LHTLPPEGLTLIFVETKRMADTLTDYLLNSNFPATSIHGDRTQRERERALELFRSGRTSI 483

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             +VAT VA+RGLDIPNV  +I+Y+LP D + +VHR GRTGRAG  G A+  F  + +   +
Sbjct:   484 MVATAVASRGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGQAVAFFNRNNKGIAK 543

Query:   178 SL 179
              L
Sbjct:   544 EL 545


>TAIR|locus:2076351 [details] [associations]
            symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
            "plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
            evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
            GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
            GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
            EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
            IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
            RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
            UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
            STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
            EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
            KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
            OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
            Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
        Length = 612

 Score = 321 (118.1 bits), Expect = 3.8e-28, P = 3.8e-28
 Identities = 75/187 (40%), Positives = 112/187 (59%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             MLFSAT PS +++L+  ++ N   L +  VG+  + + + ++    S     KR+ L DL
Sbjct:   342 MLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQRVEFVQES----DKRSHLMDL 397

Query:    59 ITVYA----KGGKTIVFTQTKRDADEVS--LALTSIIASEALHGDISQHQRERTLNGFRQ 112
             +        K   T+VF +TKR AD +   L +    A+ ++HGD +Q +RE  L  F+ 
Sbjct:   398 LHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPAT-SIHGDRTQQEREVALRSFKT 456

Query:   113 GKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQ 172
             G+  +LVATDVAARGLDIP+V  +++++LPND + +VHR GRTGRAGK G A   F  + 
Sbjct:   457 GRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENN 516

Query:   173 RRTVRSL 179
              +  RSL
Sbjct:   517 AQLARSL 523


>UNIPROTKB|Q81QF0 [details] [associations]
            symbol:BAS2301 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:1392 "Bacillus anthracis" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
            EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
            GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
            RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
            DNASU:1085525 EnsemblBacteria:EBBACT00000011128
            EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
            GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
            KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
            ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
            BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
        Length = 450

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 73/204 (35%), Positives = 115/204 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             MLFSAT+P  +KKL+++Y+D P  I +    +E   + I+   I TT  +K   L   + 
Sbjct:   183 MLFSATIPKDIKKLAKRYMDEPQMIQV--QSEEVTVDTIEQRVIETTDRAKPDALR-FVM 239

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSIIASEA-LHGDISQHQRERTLNGFRQGKFTVLV 119
                +    ++F +TK  A ++   L  +  + A LHGDI Q +RER +  FR+ K   L+
Sbjct:   240 DRDQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLI 299

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLD+  V  + +Y++P D E+++HR GRTGRAG  G AI    +   + +  +
Sbjct:   300 ATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFVAAKDEKHLEEI 359

Query:   180 ERDVGCKF--EFVSPPVVEDVLES 201
             E+ +G     E +  P ++ V E+
Sbjct:   360 EKTLGAPIQREIIEQPKIKRVDEN 383


>TIGR_CMR|BA_2475 [details] [associations]
            symbol:BA_2475 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
            EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
            GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
            RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
            DNASU:1085525 EnsemblBacteria:EBBACT00000011128
            EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
            GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
            KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
            ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
            BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
        Length = 450

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 73/204 (35%), Positives = 115/204 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             MLFSAT+P  +KKL+++Y+D P  I +    +E   + I+   I TT  +K   L   + 
Sbjct:   183 MLFSATIPKDIKKLAKRYMDEPQMIQV--QSEEVTVDTIEQRVIETTDRAKPDALR-FVM 239

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSIIASEA-LHGDISQHQRERTLNGFRQGKFTVLV 119
                +    ++F +TK  A ++   L  +  + A LHGDI Q +RER +  FR+ K   L+
Sbjct:   240 DRDQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLI 299

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLD+  V  + +Y++P D E+++HR GRTGRAG  G AI    +   + +  +
Sbjct:   300 ATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFVAAKDEKHLEEI 359

Query:   180 ERDVGCKF--EFVSPPVVEDVLES 201
             E+ +G     E +  P ++ V E+
Sbjct:   360 EKTLGAPIQREIIEQPKIKRVDEN 383


>TIGR_CMR|SO_1383 [details] [associations]
            symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
            GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
            ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
            PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
        Length = 433

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 76/197 (38%), Positives = 111/197 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSAT  S VKKL+ + +  P  I    ++    A+ +           KR +LS+LI 
Sbjct:   183 LLFSATFSSAVKKLANEMMIKPQVIS--ADKQNTTADTVSQVVYPVEQRRKRELLSELIG 240

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                   + +VFT T+  AD +   L    I SE +HG+ +Q  R R L  F  GK  VLV
Sbjct:   241 K-KNWQQVLVFTATRDAADTLVKELNLDGIPSEVVHGEKAQGSRRRALREFVSGKVRVLV 299

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             AT+VAARGLDIP+++ +++++LP   E +VHR GRTGRAGK G AI   +  + RT+  +
Sbjct:   300 ATEVAARGLDIPSLEYVVNFDLPFLAEDYVHRIGRTGRAGKSGVAISFVSREEERTLADI 359

Query:   180 ERDVGCKFEFVSPPVVE 196
             E+ +G K   ++ P  E
Sbjct:   360 EKLIGQKIRRITVPGYE 376


>CGD|CAL0000056 [details] [associations]
            symbol:orf19.7546 species:5476 "Candida albicans" [GO:0005634
            "nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
            transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
            [GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
            EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K14777 EMBL:AR550432 RefSeq:XP_719308.1
            ProteinModelPortal:Q5ACU6 SMR:Q5ACU6 STRING:Q5ACU6 GeneID:3639008
            KEGG:cal:CaO19.7546 Uniprot:Q5ACU6
        Length = 539

 Score = 314 (115.6 bits), Expect = 1.3e-27, P = 1.3e-27
 Identities = 79/211 (37%), Positives = 116/211 (54%)

Query:     2 LFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITV 61
             LFSATM + ++KL R  L NP+ + +  +   + A+ +    +      K TIL  L+  
Sbjct:   302 LFSATMTNKIEKLQRASLHNPVRVAV--SSKYQTADNLVQSMMLVNDGYKNTILIHLLNE 359

Query:    62 YAKGGKTIVFTQTKRDADEVSLALTSIIASEA--LHGDISQHQRERTLNGFRQGKFTVLV 119
             +  G   IVFT+T   A   +L L  I+   A  LHG +SQ QR  +LN F+  +  +LV
Sbjct:   360 FM-GKSIIVFTRTVAHAQRTAL-LARILGFNAVPLHGQLSQSQRLGSLNKFKSNQANILV 417

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLDIP+VD++I+Y++P D + ++HR GRT RAG+ G +I + T         +
Sbjct:   418 ATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRTARAGRSGKSISLITQYDLEMYLRI 477

Query:   180 ERDVGCKF--EFVSPPVVEDVLESSAEQVVA 208
             E  +G K   E   P  V D L    ++  A
Sbjct:   478 ESVLGKKLPKEDKPPKEVLDALHVHVDKATA 508


>TIGR_CMR|VC_2564 [details] [associations]
            symbol:VC_2564 "ATP-dependent RNA helicase DbpA"
            species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
            KO:K05591 ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
            OMA:THEKSTI PIR:B82060 RefSeq:NP_232192.1 ProteinModelPortal:Q9KP15
            DNASU:2615581 GeneID:2615581 KEGG:vch:VC2564 PATRIC:20084152
            Uniprot:Q9KP15
        Length = 460

 Score = 289 (106.8 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
 Identities = 69/220 (31%), Positives = 113/220 (51%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSAT P+ ++++++    N L I +    D      I+ Y      ++ R    + + 
Sbjct:   182 LLFSATYPASIEQIAQSVTRNALMIKVEATHD---TSSIRQYFYKVEGSAARDEALETLL 238

Query:    61 VYAKGGKTIVFTQTKRDADEVSLAL-TSIIASEALHGDISQHQRERTLNGFRQGKFTVLV 119
             ++ +   ++VF  TKR+   V+ AL  S  +   LHGD+ Q +R++ L  F     ++LV
Sbjct:   239 LHHQPTSSVVFCNTKREVQNVADALHQSGFSVIELHGDMEQRERDQALVQFANKSISILV 298

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLD+ N+D + +Y+L  DPE  VHR GRTGRAG +G A   F+ ++   V  +
Sbjct:   299 ATDVAARGLDVDNLDAVFNYDLSRDPEVHVHRIGRTGRAGSKGLAFSFFSDNESYRVAQI 358

Query:   180 ERDVGCKFE-FVSPPVVEDVLESSAEQVVATLNGVHPESV 218
             +  +    E    P         +A  V   ++G   + V
Sbjct:   359 DEYMDIAIEPSTLPQPAAGARPYAANMVTIQIDGGKKDKV 398

 Score = 40 (19.1 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
 Identities = 15/45 (33%), Positives = 24/45 (53%)

Query:   284 VMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNK 328
             ++G L+      A+ IGKI++    R   AV    ++IA + LNK
Sbjct:   403 ILGALTSDGELTAEHIGKINLFPM-RAYVAVH---KKIATKALNK 443


>TAIR|locus:2035741 [details] [associations]
            symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
            thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
            [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
            GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
            EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
            IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
            UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
            PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
            KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
            OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
            Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
        Length = 501

 Score = 311 (114.5 bits), Expect = 1.9e-27, P = 1.9e-27
 Identities = 71/193 (36%), Positives = 110/193 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             + +SAT P  V++LS+K+L NP  + ++G+ D K    I+      + + K   L  L+ 
Sbjct:   281 LYWSATWPKEVEQLSKKFLYNPYKV-IIGSSDLKANRAIRQIVDVISESQKYNKLVKLLE 339

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                 G + +VF  TK+  D+++  L      + ++HGD SQ +R+  L+ FR GK  ++ 
Sbjct:   340 DIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMT 399

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLD+ +V  +I+Y+ P   E +VHR GRTGRAG +GTA   FT +  R  + L
Sbjct:   400 ATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKEL 459

Query:   180 ERDVGCKFEFVSP 192
                +    + VSP
Sbjct:   460 TNILQEAGQKVSP 472


>TIGR_CMR|GSU_0914 [details] [associations]
            symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
            GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
            ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
            PATRIC:22024603 ProtClustDB:CLSK924451
            BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
        Length = 447

 Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 67/189 (35%), Positives = 109/189 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSATMP  ++ L++  L +P+ +  VG     +     LY +      K  +L +L+ 
Sbjct:   179 LLFSATMPIDIRTLAQDILVDPVTVQ-VGTVAPAVTVAHALYPVEQHL--KTPLLLELLR 235

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
              +      ++FT+TK  A  +   L      + +L G++SQ++R+  L+GFR G F +LV
Sbjct:   236 -HTDTESVLIFTRTKHRAKRLGEQLEKAGYRAASLQGNLSQNRRQAALDGFRDGTFQILV 294

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATD+AARG+D+  V  +I+Y++P+  E ++HR GRTGRA + G A  + TS     VR++
Sbjct:   295 ATDIAARGIDVSQVSHVINYDIPDTAEAYIHRIGRTGRAARSGDAFTLVTSDDGAMVRAI 354

Query:   180 ERDVGCKFE 188
             ER +G   E
Sbjct:   355 ERSLGAPIE 363


>POMBASE|SPBP8B7.16c [details] [associations]
            symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
            species:4896 "Schizosaccharomyces pombe" [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
            GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
            EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
            EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
            ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
            EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
            NextBio:20802492 Uniprot:P24782
        Length = 550

 Score = 312 (114.9 bits), Expect = 2.4e-27, P = 2.4e-27
 Identities = 69/182 (37%), Positives = 109/182 (59%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIK-LYAISTTATSKRTILSDLI 59
             ++FSAT P  V++L+R YL++ + +  VG+ D   +  IK +  +   A  +  +  D+ 
Sbjct:   304 VMFSATWPKEVQRLARDYLNDYIQVT-VGSLDLAASHNIKQIVEVVDNADKRARLGKDIE 362

Query:    60 TVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
              V   +  K ++FT TKR AD+++  L      + A+HGD +Q +R+  LN FR GK  +
Sbjct:   363 EVLKDRDNKVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGKSPI 422

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             +VATDVA+RG+D+  +  + +Y+ P + E +VHR GRTGRAG +GTA   FTS   +  R
Sbjct:   423 MVATDVASRGIDVKGITHVFNYDFPGNTEDYVHRIGRTGRAGAKGTAYTYFTSDNAKQAR 482

Query:   178 SL 179
              L
Sbjct:   483 EL 484


>TAIR|locus:2081061 [details] [associations]
            symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
            "vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
            evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
            evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
            PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
            SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
            UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
            PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
            KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
            HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
            ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
            Uniprot:Q9SQV1
        Length = 1088

 Score = 318 (117.0 bits), Expect = 2.9e-27, P = 2.9e-27
 Identities = 72/199 (36%), Positives = 110/199 (55%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLA-EGIKLYAISTTATSKRTILSDLI 59
             ++++AT P  V+K++   L NP+ ++ +G  DE  A + I  Y        K   L  ++
Sbjct:   616 LMYTATWPKEVRKIASDLLVNPVQVN-IGRVDELAANKAITQYVEVVPQMEKERRLEQIL 674

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                 +G K I+F  TKR  D ++ ++     +  +HGD +Q +R+  LN FR GK  VL+
Sbjct:   675 RSQERGSKVIIFCSTKRLCDHLARSVGRHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLI 734

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLDI ++ ++I+Y+ P   E +VHR GRTGRAG  G A   FT    +    L
Sbjct:   735 ATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKYAPDL 794

Query:   180 ERDVGCKFEFVSPPVVEDV 198
              + +    + V PP V D+
Sbjct:   795 IKVLEGANQQV-PPQVRDI 812


>UNIPROTKB|F1RX16 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
            signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
            of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
            "intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
            "cellular response to osmotic stress" evidence=IEA] [GO:0071243
            "cellular response to arsenic-containing substance" evidence=IEA]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
            "positive regulation of translational initiation" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
            response" evidence=IEA] [GO:0043280 "positive regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0043065 "positive regulation of apoptotic
            process" evidence=IEA] [GO:0043024 "ribosomal small subunit
            binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
            evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
            [GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
            "negative regulation of protein complex assembly" evidence=IEA]
            [GO:0030308 "negative regulation of cell growth" evidence=IEA]
            [GO:0030307 "positive regulation of cell growth" evidence=IEA]
            [GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
            [GO:0017148 "negative regulation of translation" evidence=IEA]
            [GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
            [GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
            "response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
            signaling pathway via death domain receptors" evidence=IEA]
            [GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
            [GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0007243
            "intracellular protein kinase cascade" evidence=IEA] [GO:0007059
            "chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
            EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
        Length = 661

 Score = 313 (115.2 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 73/182 (40%), Positives = 102/182 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             M+FSAT P  ++ L+R +LD    L +  VG+  E + + +    +    + KR+ L DL
Sbjct:   379 MMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV----VWVEESDKRSFLLDL 434

Query:    59 ITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
             +    K   T+VF +TK+ AD +   L     A  ++HGD SQ  RE  L+ FR GK  +
Sbjct:   435 LNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPI 494

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             LVAT VAARGLDI NV  +I+++LP+D E +VHR GRTGR G  G A   F        +
Sbjct:   495 LVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNANITK 554

Query:   178 SL 179
              L
Sbjct:   555 DL 556


>UNIPROTKB|Q485I3 [details] [associations]
            symbol:dbpA "ATP-dependent RNA helicase DbpA"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
            InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
            ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
            KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
            BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
        Length = 468

 Score = 282 (104.3 bits), Expect = 4.2e-27, Sum P(2) = 4.2e-27
 Identities = 65/181 (35%), Positives = 100/181 (55%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSAT P  +K +S   + +P+ + +  ++D+      K + +       R     L+ 
Sbjct:   188 LLFSATFPDQIKSISESIMTDPVMVKIASSEDQSTISQ-KFFKVGND--DDRLDALRLLL 244

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHGDISQHQRERTLNGFRQGKFTVLV 119
             +  +   T +F  TK++  +V+ AL     +  ALHGD+ Q  R++TL  F     ++LV
Sbjct:   245 LGNQVESTAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLRFANKSASILV 304

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLDI ++DL+I+Y +  D E  VHR GRTGRAG  G A  +F+  +   V  L
Sbjct:   305 ATDVAARGLDIDSLDLVINYHIARDSEVHVHRIGRTGRAGSTGIAYSLFSDKESYKVGLL 364

Query:   180 E 180
             E
Sbjct:   365 E 365

 Score = 45 (20.9 bits), Expect = 4.2e-27, Sum P(2) = 4.2e-27
 Identities = 16/88 (18%), Positives = 40/88 (45%)

Query:   250 PPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDR 309
             P  S +++++E+    +   +     +  + A  ++G L+        ++GKI ++ D++
Sbjct:   376 PLPSLAVLSNERPQAKMATIQIDGGKKQKVRAGDILGALTGDNGVQGSQVGKISVL-DNK 434

Query:   310 VQGAVFDLPEEIAKELLNKQIPPGNTIS 337
                AV      +A + ++K    G T +
Sbjct:   435 AYVAVTKAALNLALKKISKGKMKGRTFN 462


>TIGR_CMR|CPS_1540 [details] [associations]
            symbol:CPS_1540 "ATP-dependent RNA helicase DbpA"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] [GO:0008186 "RNA-dependent ATPase
            activity" evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
            GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
            InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
            ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
            KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
            BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
        Length = 468

 Score = 282 (104.3 bits), Expect = 4.2e-27, Sum P(2) = 4.2e-27
 Identities = 65/181 (35%), Positives = 100/181 (55%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSAT P  +K +S   + +P+ + +  ++D+      K + +       R     L+ 
Sbjct:   188 LLFSATFPDQIKSISESIMTDPVMVKIASSEDQSTISQ-KFFKVGND--DDRLDALRLLL 244

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHGDISQHQRERTLNGFRQGKFTVLV 119
             +  +   T +F  TK++  +V+ AL     +  ALHGD+ Q  R++TL  F     ++LV
Sbjct:   245 LGNQVESTAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLRFANKSASILV 304

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLDI ++DL+I+Y +  D E  VHR GRTGRAG  G A  +F+  +   V  L
Sbjct:   305 ATDVAARGLDIDSLDLVINYHIARDSEVHVHRIGRTGRAGSTGIAYSLFSDKESYKVGLL 364

Query:   180 E 180
             E
Sbjct:   365 E 365

 Score = 45 (20.9 bits), Expect = 4.2e-27, Sum P(2) = 4.2e-27
 Identities = 16/88 (18%), Positives = 40/88 (45%)

Query:   250 PPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDR 309
             P  S +++++E+    +   +     +  + A  ++G L+        ++GKI ++ D++
Sbjct:   376 PLPSLAVLSNERPQAKMATIQIDGGKKQKVRAGDILGALTGDNGVQGSQVGKISVL-DNK 434

Query:   310 VQGAVFDLPEEIAKELLNKQIPPGNTIS 337
                AV      +A + ++K    G T +
Sbjct:   435 AYVAVTKAALNLALKKISKGKMKGRTFN 462


>UNIPROTKB|A4QVP2 [details] [associations]
            symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
            species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
            "cellular_component" evidence=ND] [GO:0043581 "mycelium
            development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003743 EMBL:CM001231 GO:GO:0043581 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OrthoDB:EOG4PG98F
            RefSeq:XP_003711015.1 ProteinModelPortal:A4QVP2 SMR:A4QVP2
            EnsemblFungi:MGG_04400T0 GeneID:2677872 KEGG:mgr:MGG_04400
            Uniprot:A4QVP2
        Length = 396

 Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
 Identities = 76/202 (37%), Positives = 118/202 (58%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SATMP  V +++ K++ +P+ I LV  +DE   EGIK + I+      K   LSDL 
Sbjct:   200 VLLSATMPQDVLEVTTKFMRDPVRI-LV-KKDELTLEGIKQFYIAVEKEEWKLDTLSDLY 257

Query:    60 -TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
              TV     + ++F  T+R  D ++  LT+      A+HGD+ Q QR+  +  FR G   V
Sbjct:   258 ETVTIT--QAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSSRV 315

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             L+ATD+ ARG+D+  V L+I+Y+LP + E ++HR GR GR G++G AI   T+   R +R
Sbjct:   316 LIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMR 375

Query:   178 SLERDVGCKFEFVSPPVVEDVL 199
              +E+    + E + P  V D++
Sbjct:   376 EIEQFYSTQIEEM-PMNVADLI 396


>WB|WBGene00002083 [details] [associations]
            symbol:inf-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0000003 "reproduction"
            evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0040011
            "locomotion" evidence=IMP] [GO:0008340 "determination of adult
            lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
            [GO:0040010 "positive regulation of growth rate" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
            GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
            GO:GO:0000003 GO:GO:0019915 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ
            EMBL:Z12116 PIR:S26281 RefSeq:NP_001022623.1 RefSeq:NP_001022624.1
            UniGene:Cel.6803 ProteinModelPortal:P27639 SMR:P27639
            DIP:DIP-27102N IntAct:P27639 MINT:MINT-1112147 STRING:P27639
            PaxDb:P27639 PRIDE:P27639 EnsemblMetazoa:F57B9.6a.1
            EnsemblMetazoa:F57B9.6a.2 GeneID:175966 KEGG:cel:CELE_F57B9.6
            UCSC:F57B9.6a.1 CTD:175966 WormBase:F57B9.6a WormBase:F57B9.6b
            InParanoid:P27639 NextBio:890522 Uniprot:P27639
        Length = 402

 Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
 Identities = 69/201 (34%), Positives = 115/201 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SATMPS V  ++ +++ NP+ I LV  +DE   EGI+ + I+      K   L DL 
Sbjct:   206 VLLSATMPSEVLDVTNRFMRNPIRI-LV-KKDELTLEGIRQFYINVQKDEWKFDCLCDLY 263

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHGDISQHQRERTLNGFRQGKFTVL 118
              V     + ++F  T+R  D ++  +T +      LHGD+ Q +R+  +  FR G   VL
Sbjct:   264 NV-VNVTQAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVL 322

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             + TD+ ARG+D+  V L+I+Y+LP++ E ++HR GR+GR G++G AI   T +  R ++ 
Sbjct:   323 ITTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKE 382

Query:   179 LERDVGCKFEFVSPPVVEDVL 199
             +E     + E + P  + D++
Sbjct:   383 IESYYTTQIEEM-PESIADLI 402


>TAIR|locus:2162022 [details] [associations]
            symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
            EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
            IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
            UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
            PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
            KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
            OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
            Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
        Length = 591

 Score = 310 (114.2 bits), Expect = 5.3e-27, P = 5.3e-27
 Identities = 70/203 (34%), Positives = 113/203 (55%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +L+SAT P  V+ L+R++L +P    ++G+ D K  + I           K   L  L+ 
Sbjct:   347 LLWSATWPREVETLARQFLRDPYKA-IIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLK 405

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                 G K ++F +TKR  D+V+  L      + A+HGD +Q +R+R L  F+ G+  ++ 
Sbjct:   406 QLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMT 465

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLD+ ++  +++Y+ PN  E ++HR GRTGRAG +G A   FT    +  R L
Sbjct:   466 ATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFAREL 525

Query:   180 ERDVGCKFEFVSPPVVEDVLESS 202
              + +    + V PP +  ++ SS
Sbjct:   526 VKILQEAGQVV-PPTLSALVRSS 547


>UNIPROTKB|P25888 [details] [associations]
            symbol:rhlE "ATP-dependent RNA helicase" species:83333
            "Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
            GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
            GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
            PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
            ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
            MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
            EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
            KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
            EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
            BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
            Genevestigator:P25888 Uniprot:P25888
        Length = 454

 Score = 304 (112.1 bits), Expect = 5.5e-27, P = 5.5e-27
 Identities = 72/184 (39%), Positives = 106/184 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSAT    +K L+ K L NPL I++   +    ++ +  +        KR +LS +I 
Sbjct:   184 LLFSATFSDDIKALAEKLLHNPLEIEVA--RRNTASDQVTQHVHFVDKKRKRELLSHMI- 240

Query:    61 VYAKGG--KTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
                KG   + +VFT+TK  A+ ++  L    I S A+HG+ SQ  R R L  F+ G   V
Sbjct:   241 --GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             LVATD+AARGLDI  +  +++YELPN PE +VHR GRTGRA   G A+ +    + + +R
Sbjct:   299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358

Query:   178 SLER 181
              +E+
Sbjct:   359 DIEK 362


>UNIPROTKB|G5E631 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:2001243 "negative regulation of intrinsic apoptotic
            signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
            of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
            "intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
            "cellular response to osmotic stress" evidence=IEA] [GO:0071243
            "cellular response to arsenic-containing substance" evidence=IEA]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
            "positive regulation of translational initiation" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
            response" evidence=IEA] [GO:0043280 "positive regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0043065 "positive regulation of apoptotic
            process" evidence=IEA] [GO:0043024 "ribosomal small subunit
            binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
            evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
            [GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
            "negative regulation of protein complex assembly" evidence=IEA]
            [GO:0030308 "negative regulation of cell growth" evidence=IEA]
            [GO:0030307 "positive regulation of cell growth" evidence=IEA]
            [GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
            [GO:0017148 "negative regulation of translation" evidence=IEA]
            [GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
            [GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
            "response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
            signaling pathway via death domain receptors" evidence=IEA]
            [GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
            [GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0007243
            "intracellular protein kinase cascade" evidence=IEA] [GO:0007059
            "chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654
            OMA:KYERGGN EMBL:DAAA02073612 RefSeq:NP_001179891.1 UniGene:Bt.9783
            PRIDE:G5E631 Ensembl:ENSBTAT00000050399 GeneID:510093
            KEGG:bta:510093 NextBio:20869274 Uniprot:G5E631
        Length = 661

 Score = 311 (114.5 bits), Expect = 5.9e-27, P = 5.9e-27
 Identities = 73/182 (40%), Positives = 102/182 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             M+FSAT P  ++ L+R +LD    L +  VG+  E + + +    +    + KR+ L DL
Sbjct:   378 MMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV----VWVEESDKRSFLLDL 433

Query:    59 ITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
             +    K   T+VF +TK+ AD +   L     A  ++HGD SQ  RE  L+ FR GK  +
Sbjct:   434 LNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPI 493

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             LVAT VAARGLDI NV  +I+++LP+D E +VHR GRTGR G  G A   F        +
Sbjct:   494 LVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITK 553

Query:   178 SL 179
              L
Sbjct:   554 DL 555


>UNIPROTKB|J9P0V9 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654 EMBL:AAEX03026295
            RefSeq:XP_861268.1 Ensembl:ENSCAFT00000045177 GeneID:480886
            KEGG:cfa:480886 Uniprot:J9P0V9
        Length = 662

 Score = 311 (114.5 bits), Expect = 5.9e-27, P = 5.9e-27
 Identities = 73/182 (40%), Positives = 102/182 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             M+FSAT P  ++ L+R +LD    L +  VG+  E + + +    +    + KR+ L DL
Sbjct:   379 MMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV----VWVEESDKRSFLLDL 434

Query:    59 ITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
             +    K   T+VF +TK+ AD +   L     A  ++HGD SQ  RE  L+ FR GK  +
Sbjct:   435 LNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPI 494

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             LVAT VAARGLDI NV  +I+++LP+D E +VHR GRTGR G  G A   F        +
Sbjct:   495 LVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITK 554

Query:   178 SL 179
              L
Sbjct:   555 DL 556


>UNIPROTKB|O00571 [details] [associations]
            symbol:DDX3X "ATP-dependent RNA helicase DDX3X"
            species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005741
            "mitochondrial outer membrane" evidence=IEA] [GO:0016607 "nuclear
            speck" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030307 "positive
            regulation of cell growth" evidence=IMP] [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=IDA] [GO:1900087
            "positive regulation of G1/S transition of mitotic cell cycle"
            evidence=IMP] [GO:0045948 "positive regulation of translational
            initiation" evidence=IMP] [GO:0031333 "negative regulation of
            protein complex assembly" evidence=IDA] [GO:0008190 "eukaryotic
            initiation factor 4E binding" evidence=IDA] [GO:0017148 "negative
            regulation of translation" evidence=IMP] [GO:0034063 "stress
            granule assembly" evidence=IDA] [GO:0010494 "cytoplasmic stress
            granule" evidence=IDA] [GO:0071470 "cellular response to osmotic
            stress" evidence=IDA] [GO:0071243 "cellular response to
            arsenic-containing substance" evidence=IDA] [GO:2001243 "negative
            regulation of intrinsic apoptotic signaling pathway" evidence=IMP]
            [GO:0007059 "chromosome segregation" evidence=IMP] [GO:0022627
            "cytosolic small ribosomal subunit" evidence=IDA] [GO:0045727
            "positive regulation of translation" evidence=IDA] [GO:0008143
            "poly(A) RNA binding" evidence=IDA] [GO:0031369 "translation
            initiation factor binding" evidence=IDA] [GO:0042256 "mature
            ribosome assembly" evidence=IMP] [GO:0043024 "ribosomal small
            subunit binding" evidence=IDA] [GO:0003723 "RNA binding"
            evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0016887
            "ATPase activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA
            helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
            helicase activity" evidence=IDA] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
            [GO:0009615 "response to virus" evidence=IDA] [GO:0007243
            "intracellular protein kinase cascade" evidence=IDA] [GO:0032728
            "positive regulation of interferon-beta production" evidence=TAS]
            [GO:0045087 "innate immune response" evidence=IMP] [GO:0071651
            "positive regulation of chemokine (C-C motif) ligand 5 production"
            evidence=TAS] [GO:0035613 "RNA stem-loop binding" evidence=IDA]
            [GO:0010501 "RNA secondary structure unwinding" evidence=IDA]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0008134
            "transcription factor binding" evidence=IDA] [GO:0030308 "negative
            regulation of cell growth" evidence=IDA] [GO:0008625 "extrinsic
            apoptotic signaling pathway via death domain receptors"
            evidence=IMP] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IMP] [GO:0043154 "negative regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IMP] [GO:0097193 "intrinsic apoptotic signaling pathway"
            evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IMP]
            [GO:0043065 "positive regulation of apoptotic process"
            evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0006200 "ATP catabolic process" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0019048
            GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0007059
            GO:GO:0030308 GO:GO:0005741 GO:GO:0017148 GO:GO:0003677
            GO:GO:0031333 GO:GO:0016607 GO:GO:0045944 GO:GO:0045087
            GO:GO:0007243 GO:GO:0006351 GO:GO:0009615 GO:GO:0043065
            GO:GO:0048027 GO:GO:0043280 GO:GO:0071470 GO:GO:0004003
            GO:GO:0097193 GO:GO:1900087 GO:GO:0008134 EMBL:CH471141
            GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
            GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
            KO:K11594 HOVERGEN:HBG015893 EMBL:U50553 EMBL:AF061337
            EMBL:AF000983 EMBL:AF000982 EMBL:AK291153 EMBL:AK304689
            EMBL:AL391647 EMBL:Z93015 EMBL:BC011819 IPI:IPI00215637
            IPI:IPI00985384 RefSeq:NP_001180346.1 RefSeq:NP_001347.3
            UniGene:Hs.380774 PDB:2I4I PDB:2JGN PDB:3JRV PDBsum:2I4I
            PDBsum:2JGN PDBsum:3JRV ProteinModelPortal:O00571 SMR:O00571
            DIP:DIP-27551N IntAct:O00571 MINT:MINT-93217 STRING:O00571
            PhosphoSite:O00571 REPRODUCTION-2DPAGE:IPI00215637
            SWISS-2DPAGE:O00571 PaxDb:O00571 PeptideAtlas:O00571 PRIDE:O00571
            Ensembl:ENST00000399959 Ensembl:ENST00000457138 GeneID:1654
            KEGG:hsa:1654 UCSC:uc004dfe.3 CTD:1654 GeneCards:GC0XP041192
            HGNC:HGNC:2745 HPA:HPA001648 HPA:HPA005631 MIM:300160
            neXtProt:NX_O00571 PharmGKB:PA27216 InParanoid:O00571 OMA:KYERGGN
            OrthoDB:EOG47D9FV PhylomeDB:O00571 BindingDB:O00571
            ChEMBL:CHEMBL5553 ChiTaRS:DDX3X EvolutionaryTrace:O00571
            GenomeRNAi:1654 NextBio:6810 ArrayExpress:O00571 Bgee:O00571
            CleanEx:HS_DDX3X Genevestigator:O00571 GermOnline:ENSG00000124487
            GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 GO:GO:0071651
            GO:GO:0032728 Uniprot:O00571
        Length = 662

 Score = 311 (114.5 bits), Expect = 5.9e-27, P = 5.9e-27
 Identities = 73/182 (40%), Positives = 102/182 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             M+FSAT P  ++ L+R +LD    L +  VG+  E + + +    +    + KR+ L DL
Sbjct:   379 MMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV----VWVEESDKRSFLLDL 434

Query:    59 ITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
             +    K   T+VF +TK+ AD +   L     A  ++HGD SQ  RE  L+ FR GK  +
Sbjct:   435 LNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPI 494

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             LVAT VAARGLDI NV  +I+++LP+D E +VHR GRTGR G  G A   F        +
Sbjct:   495 LVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITK 554

Query:   178 SL 179
              L
Sbjct:   555 DL 556


>UNIPROTKB|Q48PB7 [details] [associations]
            symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
            putative" species:264730 "Pseudomonas syringae pv. phaseolicola
            1448A" [GO:0006139 "nucleobase-containing compound metabolic
            process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
            activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
            KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
            ProtClustDB:CLSK865855 Uniprot:Q48PB7
        Length = 625

 Score = 310 (114.2 bits), Expect = 6.4e-27, P = 6.4e-27
 Identities = 71/182 (39%), Positives = 110/182 (60%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSAT  + +  L+ K L NP  I++         E I+       A  KR++L+ LIT
Sbjct:   188 LLFSATFSNDITSLAGKLLHNPERIEVT--PPNTTVERIEQRVFRLAANHKRSLLAHLIT 245

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
             V A   + +VFT+TK  A+ ++  L    +A+ A+HG+ SQ+ R + L  F+ G   ++V
Sbjct:   246 VGA-WEQVLVFTRTKHGANRLAEYLDKHGLAAVAIHGNKSQNARTKALADFKAGDVRIMV 304

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATD+AARGLDI  +  ++++ELPN  E +VHR GRTGRAG+ G AI +    + + ++S+
Sbjct:   305 ATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEEKLLKSI 364

Query:   180 ER 181
             ER
Sbjct:   365 ER 366


>UNIPROTKB|O05855 [details] [associations]
            symbol:rhlE "PROBABLE ATP-DEPENDENT RNA HELICASE RHLE"
            species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
            wall" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005618
            GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0003676
            EMBL:BX842582 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            HOGENOM:HOG000268807 EMBL:CP003248 PIR:D70595 RefSeq:NP_217727.1
            RefSeq:NP_337835.1 RefSeq:YP_006516683.1 SMR:O05855
            EnsemblBacteria:EBMYCT00000003215 EnsemblBacteria:EBMYCT00000071518
            GeneID:13318029 GeneID:888840 GeneID:923099 KEGG:mtc:MT3307
            KEGG:mtu:Rv3211 KEGG:mtv:RVBD_3211 PATRIC:18129030
            TubercuList:Rv3211 OMA:RWQLIDK ProtClustDB:CLSK792349
            Uniprot:O05855
        Length = 527

 Score = 307 (113.1 bits), Expect = 7.1e-27, P = 7.1e-27
 Identities = 68/168 (40%), Positives = 100/168 (59%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             MLFSATMP  +  L+R ++  P +I         + +  + +     A  K  ++S ++ 
Sbjct:   207 MLFSATMPDPIITLARTFMVRPTHIRAEAPHSSAVHDATEQFVYRAHALDKVELVSRVLQ 266

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                +G  T++FT+TKR A +V+  LT    A  A+HGD+ Q  RE+ L  FR G   VLV
Sbjct:   267 ARDRGA-TMIFTRTKRTAQKVADELTERGFAVGAVHGDLGQLAREKALKAFRTGGIDVLV 325

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILM 167
             ATDVAARG+DI +V  +I+Y+ P D + +VHR GRTGRAG+ G A+ +
Sbjct:   326 ATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGRTGRAGRTGVAVTL 373


>UNIPROTKB|P0A9P6 [details] [associations]
            symbol:deaD "DeaD, DEAD-box RNA helicase" species:83333
            "Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0030684 "preribosome" evidence=IDA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0000027 "ribosomal large
            subunit assembly" evidence=IMP] [GO:0004004 "ATP-dependent RNA
            helicase activity" evidence=IDA] [GO:0006401 "RNA catabolic
            process" evidence=IGI] [GO:0003724 "RNA helicase activity"
            evidence=IDA] [GO:0070417 "cellular response to cold"
            evidence=IEP;IMP] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR021046 Pfam:PF00270 Pfam:PF00271 Pfam:PF12343
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
            GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0003723 GO:GO:0006401
            GO:GO:0070417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
            Pfam:PF03880 EMBL:M63288 EMBL:U03750 PIR:F65106 RefSeq:NP_417631.2
            RefSeq:YP_491349.1 ProteinModelPortal:P0A9P6 SMR:P0A9P6
            DIP:DIP-35752N IntAct:P0A9P6 MINT:MINT-1219396 SWISS-2DPAGE:P0A9P6
            PaxDb:P0A9P6 PRIDE:P0A9P6 EnsemblBacteria:EBESCT00000000679
            EnsemblBacteria:EBESCT00000014242 GeneID:12933435 GeneID:947674
            KEGG:ecj:Y75_p3084 KEGG:eco:b3162 PATRIC:32121742 EchoBASE:EB0211
            EcoGene:EG10215 OMA:ILFMTPR ProtClustDB:PRK11634
            BioCyc:EcoCyc:EG10215-MONOMER BioCyc:ECOL316407:JW5531-MONOMER
            Genevestigator:P0A9P6 GO:GO:0030684 Uniprot:P0A9P6
        Length = 629

 Score = 309 (113.8 bits), Expect = 8.4e-27, P = 8.4e-27
 Identities = 83/253 (32%), Positives = 135/253 (53%)

Query:     2 LFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITV 61
             LFSATMP  +++++R+++  P  + +  +   +    I     +     K   L   +  
Sbjct:   185 LFSATMPEAIRRITRRFMKEPQEVRIQSSVTTR--PDISQSYWTVWGMRKNEALVRFLEA 242

Query:    62 YAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHGDISQHQRERTLNGFRQGKFTVLVA 120
                    I+F +TK    EV+ AL  +   S AL+GD++Q  RE+TL   + G+  +L+A
Sbjct:   243 -EDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIA 301

Query:   121 TDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 180
             TDVAARGLD+  + L+++Y++P D E++VHR GRTGRAG+ G A+L   + +RR +R++E
Sbjct:   302 TDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIE 361

Query:   181 RDVGCKFEFVSPPVVEDV----LESSAEQVVATLNGVHPES----VEFFTPTAQRLIEEK 232
             R +      V  P  E +    LE  A +V   L     +     +    PTA+   EE 
Sbjct:   362 RTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLSKIQPTAEG--EEL 419

Query:   233 GTDALAAALAQLS 245
               + LAAAL +++
Sbjct:   420 DLETLAAALLKMA 432


>TIGR_CMR|GSU_0491 [details] [associations]
            symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
            RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
            KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
            BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
        Length = 450

 Score = 302 (111.4 bits), Expect = 8.8e-27, P = 8.8e-27
 Identities = 70/185 (37%), Positives = 112/185 (60%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LF+ATM S + +L+ + L  P  ID+ G +        +L+ ++     K  +L  LIT
Sbjct:   182 LLFTATMDSAMARLAGRLLREPERIDIAGTKTTHEHIEQRLH-VADDLHHKNRLLRHLIT 240

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
               +   + I+F+ TKRDA+ ++L L +   ++ ALHGD+ Q+ R RT+   +QG+  +LV
Sbjct:   241 DESLR-RAIIFSATKRDAENLALELKAQGHSAAALHGDMPQNARNRTIAAMKQGRIRLLV 299

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLD+  +  +I+++LP   E +VHR GRTGRAG  G AI   + ++   +  +
Sbjct:   300 ATDVAARGLDVTGISHVINFDLPKFAEDYVHRIGRTGRAGASGIAISFASLNEVNYLARI 359

Query:   180 ERDVG 184
             ER +G
Sbjct:   360 ERYIG 364


>UNIPROTKB|Q0C354 [details] [associations]
            symbol:rhlE "ATP-dependent RNA helicase RhlE"
            species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
            GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
            GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
            BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
        Length = 464

 Score = 303 (111.7 bits), Expect = 9.1e-27, P = 9.1e-27
 Identities = 73/187 (39%), Positives = 105/187 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             + FSATMP  V+ L+  +L NP  + +        A  I+          K ++L + I 
Sbjct:   189 LFFSATMPKAVESLAATFLRNPAEVSVA--PPATTAGRIEQRVCFVEQPEKASLLIEKIR 246

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                +    IVFT+TK  AD V   L    I S A+HG+ SQ QRE+ L  F+ G+  +LV
Sbjct:   247 D-PELRSAIVFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQREKALEAFKAGRVPILV 305

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATD+AARG+ +  +  +I+Y+LP+ PE FVHR GRT RAG  G AI   +  +R T+R++
Sbjct:   306 ATDIAARGIHVDALTHVINYDLPDVPEQFVHRIGRTARAGNSGVAISFCSRDERPTLRAI 365

Query:   180 ERDVGCK 186
             E+  G K
Sbjct:   366 EKLTGLK 372


>UNIPROTKB|B4E132 [details] [associations]
            symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
            sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
            HOGENOM:HOG000268804 HOVERGEN:HBG015893 UniGene:Hs.99120
            HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK303638 IPI:IPI00908506
            ProteinModelPortal:B4E132 SMR:B4E132 STRING:B4E132
            Ensembl:ENST00000420730 Uniprot:B4E132
        Length = 407

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 71/182 (39%), Positives = 100/182 (54%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             M+FSAT P  ++ L+R +LD    L +  VG+  E + + +    +      KR+ L D+
Sbjct:   124 MMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV----VWVEDLDKRSFLLDI 179

Query:    59 ITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
             +        T+VF +TK+ AD +   L     A  ++HGD SQ  RE  L+ FR GK  +
Sbjct:   180 LGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPI 239

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             LVAT VAARGLDI NV  +I+++LP+D E +VHR GRTGR G  G A   F        +
Sbjct:   240 LVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITK 299

Query:   178 SL 179
              L
Sbjct:   300 DL 301


>TIGR_CMR|BA_4509 [details] [associations]
            symbol:BA_4509 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
            EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
            GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268806 OMA:YAHVEPK HSSP:P10081
            RefSeq:NP_846734.1 RefSeq:YP_021153.1 RefSeq:YP_030436.1
            ProteinModelPortal:Q81LV0 SMR:Q81LV0
            EnsemblBacteria:EBBACT00000013143 EnsemblBacteria:EBBACT00000016547
            EnsemblBacteria:EBBACT00000022918 GeneID:1088235 GeneID:2818505
            GeneID:2850064 KEGG:ban:BA_4509 KEGG:bar:GBAA_4509 KEGG:bat:BAS4187
            ProtClustDB:CLSK887589 BioCyc:BANT260799:GJAJ-4244-MONOMER
            BioCyc:BANT261594:GJ7F-4386-MONOMER Uniprot:Q81LV0
        Length = 436

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 66/191 (34%), Positives = 113/191 (59%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             ++FSAT+P  +K   +KY++NP +I +  N  +  A  I+ Y + +   +K  +++ ++ 
Sbjct:   185 LVFSATIPQKLKPFLKKYMENPEHIHI--NPKQVAAGNIEHYLVPSKHRNKIDLVNKMLL 242

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
              + K    +VFT TK+ AD+V+  L    +    +HGD+S   R++ +   R  +F  +V
Sbjct:   243 QF-KPYLAVVFTNTKKMADQVADGLMERGLKVGRIHGDLSPRDRKKMMKQIRDLEFQYIV 301

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATD+AARG+DI  +  +I+YELP+D + FVHR GRT RAG  G A+ ++  +    + SL
Sbjct:   302 ATDLAARGIDIEGISHVINYELPSDLDFFVHRVGRTARAGHSGIAVTIYDPANEEALDSL 361

Query:   180 ERDVGCKFEFV 190
             E+    +F+ V
Sbjct:   362 EKQRHIEFKHV 372


>MGI|MGI:1349406 [details] [associations]
            symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
            Y-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:1349406 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 OrthoDB:EOG47D9FV
            CTD:8653 EMBL:AJ007376 EMBL:BC021453 EMBL:L25337 IPI:IPI00134371
            RefSeq:NP_036138.1 UniGene:Mm.486436 ProteinModelPortal:Q62095
            SMR:Q62095 STRING:Q62095 PhosphoSite:Q62095 PaxDb:Q62095
            PRIDE:Q62095 Ensembl:ENSMUST00000091190 GeneID:26900 KEGG:mmu:26900
            InParanoid:Q62095 NextBio:304749 Bgee:Q62095 Genevestigator:Q62095
            GermOnline:ENSMUSG00000069045 Uniprot:Q62095
        Length = 658

 Score = 309 (113.8 bits), Expect = 9.5e-27, P = 9.5e-27
 Identities = 71/182 (39%), Positives = 101/182 (55%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             M+FSAT P  ++ L+R +LD    L +  VG+  E + + +    +      KR+ L DL
Sbjct:   378 MMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV----VWVEELDKRSFLLDL 433

Query:    59 ITVYAKGGKTIVFTQTKRDADEV-SLALTSIIASEALHGDISQHQRERTLNGFRQGKFTV 117
             +    K   T+VF +TK+ AD + +       A  ++HGD SQ  RE  L+ FR G+  +
Sbjct:   434 LNATGKDSLTLVFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPI 493

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             LVAT VAARGLDI NV  +I+++LP+D E +VHR GRTGR G  G A   F        +
Sbjct:   494 LVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNLNITK 553

Query:   178 SL 179
              L
Sbjct:   554 DL 555


>MGI|MGI:103064 [details] [associations]
            symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3,
            X-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
            "RNA binding" evidence=ISO] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
            [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005741
            "mitochondrial outer membrane" evidence=IEA] [GO:0006200 "ATP
            catabolic process" evidence=IEA;ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
            of translation" evidence=IEA] [GO:0006915 "apoptotic process"
            evidence=IEA] [GO:0007059 "chromosome segregation" evidence=ISO]
            [GO:0007243 "intracellular protein kinase cascade" evidence=ISO]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=ISO]
            [GO:0008143 "poly(A) RNA binding" evidence=ISO] [GO:0008152
            "metabolic process" evidence=IEA] [GO:0008190 "eukaryotic
            initiation factor 4E binding" evidence=ISO] [GO:0008625 "extrinsic
            apoptotic signaling pathway via death domain receptors"
            evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
            [GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010501
            "RNA secondary structure unwinding" evidence=ISO] [GO:0016020
            "membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
            [GO:0017148 "negative regulation of translation" evidence=ISO]
            [GO:0030307 "positive regulation of cell growth" evidence=ISO]
            [GO:0030308 "negative regulation of cell growth" evidence=ISO]
            [GO:0031333 "negative regulation of protein complex assembly"
            evidence=ISO] [GO:0031369 "translation initiation factor binding"
            evidence=ISO] [GO:0034063 "stress granule assembly" evidence=ISO]
            [GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0042254
            "ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
            assembly" evidence=ISO] [GO:0043024 "ribosomal small subunit
            binding" evidence=ISO] [GO:0043065 "positive regulation of
            apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
            of apoptotic process" evidence=ISO] [GO:0043154 "negative
            regulation of cysteine-type endopeptidase activity involved in
            apoptotic process" evidence=ISO] [GO:0043280 "positive regulation
            of cysteine-type endopeptidase activity involved in apoptotic
            process" evidence=ISO] [GO:0045087 "innate immune response"
            evidence=ISO] [GO:0045727 "positive regulation of translation"
            evidence=ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO] [GO:0045948
            "positive regulation of translational initiation" evidence=ISO]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=ISO] [GO:0071243
            "cellular response to arsenic-containing substance" evidence=ISO]
            [GO:0071470 "cellular response to osmotic stress" evidence=ISO]
            [GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO]
            [GO:1900087 "positive regulation of G1/S transition of mitotic cell
            cycle" evidence=ISO] [GO:2001243 "negative regulation of intrinsic
            apoptotic signaling pathway" evidence=ISO] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:103064
            GO:GO:0005524 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
            GO:GO:0030307 GO:GO:0007059 GO:GO:0005741 GO:GO:0017148
            GO:GO:0003677 GO:GO:0031333 GO:GO:0016607 GO:GO:0045944
            GO:GO:0045087 GO:GO:0007243 GO:GO:0006351 GO:GO:0009615
            GO:GO:0043065 GO:GO:0048027 GO:GO:0043280 GO:GO:0071470
            GO:GO:0004003 GO:GO:0097193 GO:GO:1900087 GO:GO:0008134
            GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
            GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
            GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 KO:K11594
            HOVERGEN:HBG015893 CTD:1654 OrthoDB:EOG47D9FV ChiTaRS:DDX3X
            GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 EMBL:Z38117 EMBL:L25126
            IPI:IPI00230035 PIR:I84741 RefSeq:NP_034158.1 UniGene:Mm.289662
            ProteinModelPortal:Q62167 SMR:Q62167 IntAct:Q62167
            MINT:MINT-1870173 STRING:Q62167 PhosphoSite:Q62167
            REPRODUCTION-2DPAGE:Q62167 PaxDb:Q62167 PRIDE:Q62167
            Ensembl:ENSMUST00000000804 GeneID:13205 KEGG:mmu:13205
            InParanoid:Q62167 NextBio:283364 Bgee:Q62167 CleanEx:MM_ERH
            Genevestigator:Q62167 GermOnline:ENSMUSG00000000787 Uniprot:Q62167
        Length = 662

 Score = 309 (113.8 bits), Expect = 9.7e-27, P = 9.7e-27
 Identities = 73/182 (40%), Positives = 101/182 (55%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             M+FSAT P  ++ L+R +LD    L +  VG+  E + + +    +      KR+ L DL
Sbjct:   379 MMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV----VWVEEIDKRSFLLDL 434

Query:    59 ITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
             +    K   T+VF +TK+ AD +   L     A  ++HGD SQ  RE  L+ FR GK  +
Sbjct:   435 LNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPI 494

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             LVAT VAARGLDI NV  +I+++LP+D E +VHR GRTGR G  G A   F        +
Sbjct:   495 LVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITK 554

Query:   178 SL 179
              L
Sbjct:   555 DL 556


>RGD|1564771 [details] [associations]
            symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
            X-linked" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 RGD:1564771 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            OMA:KYERGGN OrthoDB:EOG47D9FV IPI:IPI00362534 PhosphoSite:D4ADE8
            PRIDE:D4ADE8 Ensembl:ENSRNOT00000039551 UCSC:RGD:1564771
            Uniprot:D4ADE8
        Length = 662

 Score = 309 (113.8 bits), Expect = 9.7e-27, P = 9.7e-27
 Identities = 73/182 (40%), Positives = 101/182 (55%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             M+FSAT P  ++ L+R +LD    L +  VG+  E + + +    +      KR+ L DL
Sbjct:   379 MMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV----VWVEEIDKRSFLLDL 434

Query:    59 ITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
             +    K   T+VF +TK+ AD +   L     A  ++HGD SQ  RE  L+ FR GK  +
Sbjct:   435 LNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPI 494

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             LVAT VAARGLDI NV  +I+++LP+D E +VHR GRTGR G  G A   F        +
Sbjct:   495 LVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITK 554

Query:   178 SL 179
              L
Sbjct:   555 DL 556


>UNIPROTKB|I3LHW0 [details] [associations]
            symbol:I3LHW0 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 Ensembl:ENSSSCT00000032137 OMA:FESQIMK
            Uniprot:I3LHW0
        Length = 621

 Score = 308 (113.5 bits), Expect = 1.0e-26, P = 1.0e-26
 Identities = 73/206 (35%), Positives = 114/206 (55%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             ++ SAT P  +++L+  YL  P+ +  VG  D    + +K   I TT   KR++  + + 
Sbjct:   397 IMTSATWPDTIRQLAHSYLKEPMLV-YVGTLDLVAVDTVKQNIIITTEEEKRSLFQEFLQ 455

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHGDISQHQRERTLNGFRQGKFTVLV 119
               +   K IVF   K  AD++S  L+   I  ++LHGD  Q  RER L+ F+ GK  +L+
Sbjct:   456 SLSPKDKVIVFVSRKLIADDLSSDLSIQGIPVQSLHGDREQSDRERALDDFKTGKVKILI 515

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATD+A+RGLD+ +V  + +Y  P + E +VHR GRTGRAGK G ++ + T    +    L
Sbjct:   516 ATDLASRGLDVSDVTHVFNYNFPRNIEEYVHRVGRTGRAGKMGESVTLMTQDDWKVAGEL 575

Query:   180 ERDVGCKFEFVSPPVVEDVLESSAEQ 205
                +    +  +  + ED+L S AEQ
Sbjct:   576 IEIL----QRANQSIPEDLL-SMAEQ 596


>UNIPROTKB|F1SQ03 [details] [associations]
            symbol:LOC100524536 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            OMA:GLKSICI EMBL:CU927956 RefSeq:XP_003135023.1
            ProteinModelPortal:F1SQ03 Ensembl:ENSSSCT00000013311
            GeneID:100524536 Uniprot:F1SQ03
        Length = 630

 Score = 308 (113.5 bits), Expect = 1.1e-26, P = 1.1e-26
 Identities = 73/206 (35%), Positives = 114/206 (55%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             ++ SAT P  +++L+  YL  P+ +  VG  D    + +K   I TT   KR++  + + 
Sbjct:   406 IMTSATWPDTIRQLAHSYLKEPMLV-YVGTLDLVAVDTVKQNIIITTEEEKRSLFQEFLQ 464

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHGDISQHQRERTLNGFRQGKFTVLV 119
               +   K IVF   K  AD++S  L+   I  ++LHGD  Q  RER L+ F+ GK  +L+
Sbjct:   465 SLSPKDKVIVFVSRKLIADDLSSDLSIQGIPVQSLHGDREQSDRERALDDFKTGKVKILI 524

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATD+A+RGLD+ +V  + +Y  P + E +VHR GRTGRAGK G ++ + T    +    L
Sbjct:   525 ATDLASRGLDVSDVTHVFNYNFPRNIEEYVHRVGRTGRAGKMGESVTLMTQDDWKVAGEL 584

Query:   180 ERDVGCKFEFVSPPVVEDVLESSAEQ 205
                +    +  +  + ED+L S AEQ
Sbjct:   585 IEIL----QRANQSIPEDLL-SMAEQ 605


>UNIPROTKB|F1NIX2 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 EMBL:AADN02011031 IPI:IPI00579247
            Ensembl:ENSGALT00000026171 ArrayExpress:F1NIX2 Uniprot:F1NIX2
        Length = 636

 Score = 308 (113.5 bits), Expect = 1.1e-26, P = 1.1e-26
 Identities = 73/182 (40%), Positives = 101/182 (55%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             M+FSAT P  ++ L+R +LD    L +  VG+  E + + +    +      KR+ L DL
Sbjct:   356 MMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV----VWVEELDKRSFLLDL 411

Query:    59 ITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
             +    K   T+VF +TK+ AD +   L     A  ++HGD SQ  RE  L+ FR GK  +
Sbjct:   412 LNATGKDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPI 471

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             LVAT VAARGLDI NV  +I+++LP+D E +VHR GRTGR G  G A   F        +
Sbjct:   472 LVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITK 531

Query:   178 SL 179
              L
Sbjct:   532 DL 533


>UNIPROTKB|F1NIX1 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AADN02011031
            IPI:IPI00822944 Ensembl:ENSGALT00000026172 ArrayExpress:F1NIX1
            Uniprot:F1NIX1
        Length = 638

 Score = 308 (113.5 bits), Expect = 1.1e-26, P = 1.1e-26
 Identities = 73/182 (40%), Positives = 101/182 (55%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             M+FSAT P  ++ L+R +LD    L +  VG+  E + + +    +      KR+ L DL
Sbjct:   357 MMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV----VWVEELDKRSFLLDL 412

Query:    59 ITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
             +    K   T+VF +TK+ AD +   L     A  ++HGD SQ  RE  L+ FR GK  +
Sbjct:   413 LNATGKDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPI 472

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             LVAT VAARGLDI NV  +I+++LP+D E +VHR GRTGR G  G A   F        +
Sbjct:   473 LVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITK 532

Query:   178 SL 179
              L
Sbjct:   533 DL 534


>SGD|S000003046 [details] [associations]
            symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
            family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
            subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
            processing" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
            "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
            tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
            evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
            GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
            EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
            ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
            MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
            EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
            KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
            KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
            GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
        Length = 523

 Score = 305 (112.4 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 74/207 (35%), Positives = 117/207 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEG--IKLYAISTTATSKRTILSDL 58
             ++F+AT P  V++L+  +++NP+ +  +GN D+  A     ++  +      +R +L +L
Sbjct:   291 LMFTATWPKEVRELASTFMNNPIKVS-IGNTDQLTANKRITQIVEVVDPRGKERKLL-EL 348

Query:    59 ITVYAKGGK----TIVFTQTKRDADEVSLALT-SIIASEALHGDISQHQRERTLNGFRQG 113
             +  Y  G K     ++F   K++A  V   L  +     A+HGD+SQ QR + LN F+ G
Sbjct:   349 LKKYHSGPKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSG 408

Query:   114 KFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQR 173
             K  +L+ATDVAARGLDIPNV  +I+   P   E +VHR GRTGRAG+ GTA  +FT  ++
Sbjct:   409 KSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQEK 468

Query:   174 RTVRSLERDVGCKFEFVSPPVVEDVLE 200
                  L   +       + PV ED+++
Sbjct:   469 HLAGGLVNVLNG----ANQPVPEDLIK 491


>ASPGD|ASPL0000037981 [details] [associations]
            symbol:AN2932 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0003743
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 KO:K03257 OMA:TENDARQ RefSeq:XP_660536.1
            PRIDE:Q5B948 GeneID:2874390 KEGG:ani:AN2932.2 OrthoDB:EOG4PG98F
            Uniprot:Q5B948
        Length = 398

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 76/202 (37%), Positives = 118/202 (58%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SATMP  V +++ K++ +P+ I LV  Q+  L EGIK + I+      K   LSDL 
Sbjct:   202 VLLSATMPQDVLEVTTKFMRDPVRI-LVKKQELTL-EGIKQFYIAVEKEEWKLDTLSDLY 259

Query:    60 -TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
              TV     + ++F  T+R  D ++  LT+      A+HGD+ Q QR+  +  FR G   V
Sbjct:   260 ETVTIT--QAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRV 317

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             L+ATD+ ARG+D+  V L+I+Y+LP + E ++HR GR GR G++G AI   T+   R +R
Sbjct:   318 LIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMR 377

Query:   178 SLERDVGCKFEFVSPPVVEDVL 199
              +E+    + E + P  V D++
Sbjct:   378 EIEQFYSTQIEEM-PMNVADLI 398


>UNIPROTKB|F1NTS2 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=IEA] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0008143 "poly(A) RNA binding"
            evidence=IEA] [GO:0017148 "negative regulation of translation"
            evidence=IEA] [GO:0035145 "exon-exon junction complex"
            evidence=IEA] [GO:0045727 "positive regulation of translation"
            evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
            GeneTree:ENSGT00530000062880 IPI:IPI00588271 EMBL:AADN02041229
            EMBL:AADN02041230 ProteinModelPortal:F1NTS2
            Ensembl:ENSGALT00000038969 OMA:KTRNGVD ArrayExpress:F1NTS2
            Uniprot:F1NTS2
        Length = 414

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 70/201 (34%), Positives = 115/201 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SAT+P  + +++ K++ +P+ I LV  +DE   EGIK + ++      K   L DL 
Sbjct:   218 VLISATLPHEILEMTNKFMTDPIRI-LV-KRDELTLEGIKQFFVAVEREEWKFDTLCDLY 275

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  TKR  D ++  +        ++HGD+ Q +RE  +  FR G   VL
Sbjct:   276 DTLTIT-QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVL 334

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             ++TDV ARGLD+P V LII+Y+LPN+ E ++HR GR+GR G++G AI    +   R +R 
Sbjct:   335 ISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRD 394

Query:   179 LERDVGCKFEFVSPPVVEDVL 199
             +E+    + + + P  V D++
Sbjct:   395 IEQYYSTQIDEM-PMNVADLI 414


>UNIPROTKB|Q5ZM36 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
            catabolic process, nonsense-mediated decay" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0006417 "regulation of translation" evidence=IEA] [GO:0008380
            "RNA splicing" evidence=IEA] [GO:0051028 "mRNA transport"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016607
            "nuclear speck" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0006417 GO:GO:0000184 GO:GO:0008380 GO:GO:0016607
            GO:GO:0006397 GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
            OrthoDB:EOG4229JV EMBL:AJ719548 IPI:IPI00588271
            RefSeq:NP_001025820.1 UniGene:Gga.7844 ProteinModelPortal:Q5ZM36
            SMR:Q5ZM36 PRIDE:Q5ZM36 GeneID:416704 KEGG:gga:416704
            InParanoid:Q5ZM36 NextBio:20820126 Uniprot:Q5ZM36
        Length = 412

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 70/201 (34%), Positives = 115/201 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SAT+P  + +++ K++ +P+ I LV  +DE   EGIK + ++      K   L DL 
Sbjct:   216 VLISATLPHEILEMTNKFMTDPIRI-LV-KRDELTLEGIKQFFVAVEREEWKFDTLCDLY 273

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  TKR  D ++  +        ++HGD+ Q +RE  +  FR G   VL
Sbjct:   274 DTLTIT-QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVL 332

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             ++TDV ARGLD+P V LII+Y+LPN+ E ++HR GR+GR G++G AI    +   R +R 
Sbjct:   333 ISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRD 392

Query:   179 LERDVGCKFEFVSPPVVEDVL 199
             +E+    + + + P  V D++
Sbjct:   393 IEQYYSTQIDEM-PMNVADLI 412


>UNIPROTKB|Q2NL22 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013 "catalytic step 2
            spliceosome" evidence=IEA] [GO:0048026 "positive regulation of mRNA
            splicing, via spliceosome" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045727 "positive regulation of translation"
            evidence=IEA] [GO:0035145 "exon-exon junction complex"
            evidence=IEA] [GO:0017148 "negative regulation of translation"
            evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
            [GO:0000184 "nuclear-transcribed mRNA catabolic process,
            nonsense-mediated decay" evidence=IEA] [GO:0051028 "mRNA transport"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
            "mRNA processing" evidence=IEA] [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
            GO:GO:0008380 GO:GO:0017148 GO:GO:0016607 GO:GO:0006397
            GO:GO:0045727 GO:GO:0051028 GO:GO:0071013 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
            GO:GO:0035145 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989
            GeneTree:ENSGT00530000062880 KO:K13025 EMBL:BC111184
            IPI:IPI00708766 RefSeq:NP_001039653.1 UniGene:Bt.3377
            ProteinModelPortal:Q2NL22 SMR:Q2NL22 PRIDE:Q2NL22
            Ensembl:ENSBTAT00000021327 GeneID:515145 KEGG:bta:515145 CTD:9775
            InParanoid:Q2NL22 OMA:LALGDFM OrthoDB:EOG4229JV NextBio:20871682
            Uniprot:Q2NL22
        Length = 411

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 70/201 (34%), Positives = 115/201 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SAT+P  + +++ K++ +P+ I LV  +DE   EGIK + ++      K   L DL 
Sbjct:   215 VLISATLPHEILEMTNKFMTDPIRI-LV-KRDELTLEGIKQFFVAVEREEWKFDTLCDLY 272

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  TKR  D ++  +        ++HGD+ Q +RE  +  FR G   VL
Sbjct:   273 DTLTIT-QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVL 331

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             ++TDV ARGLD+P V LII+Y+LPN+ E ++HR GR+GR G++G AI    +   R +R 
Sbjct:   332 ISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRD 391

Query:   179 LERDVGCKFEFVSPPVVEDVL 199
             +E+    + + + P  V D++
Sbjct:   392 IEQYYSTQIDEM-PMNVADLI 411


>UNIPROTKB|E2RDZ4 [details] [associations]
            symbol:EIF4A3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045727 "positive regulation of translation" evidence=IEA]
            [GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0017148
            "negative regulation of translation" evidence=IEA] [GO:0008143
            "poly(A) RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
            GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT CTD:9775
            EMBL:AAEX03006203 RefSeq:XP_533130.2 Ensembl:ENSCAFT00000009055
            GeneID:475922 KEGG:cfa:475922 NextBio:20851666 Uniprot:E2RDZ4
        Length = 411

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 70/201 (34%), Positives = 115/201 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SAT+P  + +++ K++ +P+ I LV  +DE   EGIK + ++      K   L DL 
Sbjct:   215 VLISATLPHEILEMTNKFMTDPIRI-LV-KRDELTLEGIKQFFVAVEREEWKFDTLCDLY 272

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  TKR  D ++  +        ++HGD+ Q +RE  +  FR G   VL
Sbjct:   273 DTLTIT-QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVL 331

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             ++TDV ARGLD+P V LII+Y+LPN+ E ++HR GR+GR G++G AI    +   R +R 
Sbjct:   332 ISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRD 391

Query:   179 LERDVGCKFEFVSPPVVEDVL 199
             +E+    + + + P  V D++
Sbjct:   392 IEQYYSTQIDEM-PMNVADLI 411


>UNIPROTKB|P38919 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0048026 "positive
            regulation of mRNA splicing, via spliceosome" evidence=IEA]
            [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013 "catalytic
            step 2 spliceosome" evidence=IDA] [GO:0045727 "positive regulation
            of translation" evidence=IMP] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=IC] [GO:0035145 "exon-exon junction complex"
            evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=IMP;TAS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0004004 "ATP-dependent RNA
            helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008143
            "poly(A) RNA binding" evidence=IDA] [GO:0017148 "negative
            regulation of translation" evidence=IDA] [GO:0000288
            "nuclear-transcribed mRNA catabolic process,
            deadenylation-dependent decay" evidence=TAS] [GO:0000289
            "nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
            [GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
            evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
            [GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0019221
            "cytokine-mediated signaling pathway" evidence=TAS]
            Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005829
            GO:GO:0005524 Reactome:REACT_6900 GO:GO:0000184 GO:GO:0017148
            GO:GO:0016607 GO:GO:0019221 TCDB:3.A.18.1.1 EMBL:CH471099
            GO:GO:0045727 GO:GO:0051028 GO:GO:0000398 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0004004 GO:GO:0000289 EMBL:AC087741 GO:GO:0035145 PDB:2HYI
            PDB:2J0Q PDB:2J0S PDB:2J0U PDB:2XB2 PDB:3EX7 PDBsum:2HYI
            PDBsum:2J0Q PDBsum:2J0S PDBsum:2J0U PDBsum:2XB2 PDBsum:3EX7
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989 KO:K13025
            OMA:EDWKFDT CTD:9775 OrthoDB:EOG4229JV EMBL:X79538 EMBL:D21853
            EMBL:AK290608 EMBL:CR456750 EMBL:BC003662 EMBL:BC004386
            EMBL:BC011151 IPI:IPI00009328 PIR:S45142 RefSeq:NP_055555.1
            UniGene:Hs.389649 PDB:2HXY PDBsum:2HXY ProteinModelPortal:P38919
            SMR:P38919 DIP:DIP-33218N IntAct:P38919 MINT:MINT-1460615
            STRING:P38919 PhosphoSite:P38919 DMDM:20532400
            REPRODUCTION-2DPAGE:IPI00009328 PaxDb:P38919 PeptideAtlas:P38919
            PRIDE:P38919 DNASU:9775 Ensembl:ENST00000269349 GeneID:9775
            KEGG:hsa:9775 UCSC:uc002jxs.3 GeneCards:GC17M078109 HGNC:HGNC:18683
            HPA:HPA021878 MIM:608546 neXtProt:NX_P38919 PharmGKB:PA162384945
            InParanoid:P38919 PhylomeDB:P38919 ChiTaRS:EIF4A3
            EvolutionaryTrace:P38919 GenomeRNAi:9775 NextBio:36802 Bgee:P38919
            CleanEx:HS_EIF4A3 Genevestigator:P38919 GermOnline:ENSG00000141543
            Uniprot:P38919
        Length = 411

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 70/201 (34%), Positives = 115/201 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SAT+P  + +++ K++ +P+ I LV  +DE   EGIK + ++      K   L DL 
Sbjct:   215 VLISATLPHEILEMTNKFMTDPIRI-LV-KRDELTLEGIKQFFVAVEREEWKFDTLCDLY 272

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  TKR  D ++  +        ++HGD+ Q +RE  +  FR G   VL
Sbjct:   273 DTLTIT-QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVL 331

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             ++TDV ARGLD+P V LII+Y+LPN+ E ++HR GR+GR G++G AI    +   R +R 
Sbjct:   332 ISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRD 391

Query:   179 LERDVGCKFEFVSPPVVEDVL 199
             +E+    + + + P  V D++
Sbjct:   392 IEQYYSTQIDEM-PMNVADLI 411


>UNIPROTKB|A6M931 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0051028 "mRNA transport"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006417
            "regulation of translation" evidence=IEA] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
            GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
            GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 KO:K13025 CTD:9775
            OrthoDB:EOG4229JV EMBL:DQ351286 RefSeq:NP_001093663.1
            UniGene:Ssc.869 ProteinModelPortal:A6M931 SMR:A6M931 PRIDE:A6M931
            GeneID:100101926 KEGG:ssc:100101926 Uniprot:A6M931
        Length = 411

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 70/201 (34%), Positives = 115/201 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SAT+P  + +++ K++ +P+ I LV  +DE   EGIK + ++      K   L DL 
Sbjct:   215 VLISATLPHEILEMTNKFMTDPIRI-LV-KRDELTLEGIKQFFVAVEREEWKFDTLCDLY 272

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  TKR  D ++  +        ++HGD+ Q +RE  +  FR G   VL
Sbjct:   273 DTLTIT-QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVL 331

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             ++TDV ARGLD+P V LII+Y+LPN+ E ++HR GR+GR G++G AI    +   R +R 
Sbjct:   332 ISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRD 391

Query:   179 LERDVGCKFEFVSPPVVEDVL 199
             +E+    + + + P  V D++
Sbjct:   392 IEQYYSTQIDEM-PMNVADLI 411


>UNIPROTKB|F1RZ83 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9823 "Sus scrofa" [GO:0071013 "catalytic step 2
            spliceosome" evidence=IEA] [GO:0045727 "positive regulation of
            translation" evidence=IEA] [GO:0035145 "exon-exon junction complex"
            evidence=IEA] [GO:0017148 "negative regulation of translation"
            evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=IEA] [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00530000062880 OMA:EDWKFDT
            EMBL:CU655945 Ensembl:ENSSSCT00000018679 ArrayExpress:F1RZ83
            Uniprot:F1RZ83
        Length = 411

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 70/201 (34%), Positives = 115/201 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SAT+P  + +++ K++ +P+ I LV  +DE   EGIK + ++      K   L DL 
Sbjct:   215 VLISATLPHEILEMTNKFMTDPIRI-LV-KRDELTLEGIKQFFVAVEREEWKFDTLCDLY 272

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  TKR  D ++  +        ++HGD+ Q +RE  +  FR G   VL
Sbjct:   273 DTLTIT-QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVL 331

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             ++TDV ARGLD+P V LII+Y+LPN+ E ++HR GR+GR G++G AI    +   R +R 
Sbjct:   332 ISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRD 391

Query:   179 LERDVGCKFEFVSPPVVEDVL 199
             +E+    + + + P  V D++
Sbjct:   392 IEQYYSTQIDEM-PMNVADLI 411


>RGD|1591139 [details] [associations]
            symbol:Eif4a3 "eukaryotic translation initiation factor 4A,
            isoform 3" species:10116 "Rattus norvegicus" [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008380 "RNA
            splicing" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
            [GO:0017148 "negative regulation of translation" evidence=IEA]
            [GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0045727
            "positive regulation of translation" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0048026 "positive regulation of mRNA
            splicing, via spliceosome" evidence=IEA] [GO:0051028 "mRNA
            transport" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:1591139 GO:GO:0005524
            GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
            GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
            EMBL:CH473948 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HSSP:P60842 KO:K13025 CTD:9775 EMBL:BC105875
            IPI:IPI00656385 RefSeq:NP_001093628.1 UniGene:Rn.202617
            ProteinModelPortal:Q3B8Q2 SMR:Q3B8Q2 PRIDE:Q3B8Q2 GeneID:688288
            KEGG:rno:688288 NextBio:736113 Genevestigator:Q3B8Q2 Uniprot:Q3B8Q2
        Length = 411

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 70/201 (34%), Positives = 115/201 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SAT+P  + +++ K++ +P+ I LV  +DE   EGIK + ++      K   L DL 
Sbjct:   215 VLISATLPHEILEMTNKFMTDPIRI-LV-KRDELTLEGIKQFFVAVEREEWKFDTLCDLY 272

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  TKR  D ++  +        ++HGD+ Q +RE  +  FR G   VL
Sbjct:   273 DTLTIT-QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVL 331

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             ++TDV ARGLD+P V LII+Y+LPN+ E ++HR GR+GR G++G AI    +   R +R 
Sbjct:   332 ISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRD 391

Query:   179 LERDVGCKFEFVSPPVVEDVL 199
             +E+    + + + P  V D++
Sbjct:   392 IEQYYSTQIDEM-PMNVADLI 411


>TAIR|locus:2030285 [details] [associations]
            symbol:AT1G72730 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009505
            "plant-type cell wall" evidence=IDA] [GO:0005774 "vacuolar
            membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0009744 "response
            to sucrose stimulus" evidence=RCA] [GO:0009749 "response to glucose
            stimulus" evidence=RCA] [GO:0009750 "response to fructose stimulus"
            evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005774
            GO:GO:0009505 GO:GO:0003743 EMBL:AC010926 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
            ProtClustDB:CLSN2679594 EMBL:AJ010472 EMBL:AY060592 EMBL:AY142066
            EMBL:AY088176 IPI:IPI00526542 PIR:B96752 PIR:T51347
            RefSeq:NP_177417.1 UniGene:At.22983 ProteinModelPortal:Q9CAI7
            SMR:Q9CAI7 IntAct:Q9CAI7 STRING:Q9CAI7 PaxDb:Q9CAI7 PRIDE:Q9CAI7
            EnsemblPlants:AT1G72730.1 GeneID:843605 KEGG:ath:AT1G72730
            GeneFarm:940 TAIR:At1g72730 InParanoid:Q9CAI7 OMA:AVINYHI
            PhylomeDB:Q9CAI7 Genevestigator:Q9CAI7 GermOnline:AT1G72730
            Uniprot:Q9CAI7
        Length = 414

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 71/200 (35%), Positives = 114/200 (57%)

Query:     2 LFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLIT 60
             +FSATMP    +++RK+++ P+ I LV  +DE   EGIK + ++      K   L DL  
Sbjct:   219 VFSATMPPEALEITRKFMNKPVRI-LV-KRDELTLEGIKQFYVNVDKEEWKLETLCDLYE 276

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSIIAS-EALHGDISQHQRERTLNGFRQGKFTVLV 119
               A   ++++F  T+R  D ++  + S   +  A HGD+ Q+ R+  +  FR G   VL+
Sbjct:   277 TLAIT-QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 335

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
              TD+ ARG+D+  V L+I+++LP  PE ++HR GR+GR G++G AI   TS   R +  +
Sbjct:   336 TTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFMTSEDERMMADI 395

Query:   180 ERDVGCKFEFVSPPVVEDVL 199
             +R      E + P  V D+L
Sbjct:   396 QRFYNVVVEEL-PSNVADLL 414


>ASPGD|ASPL0000006660 [details] [associations]
            symbol:AN5931 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
            EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
            ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
            EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
            OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
        Length = 563

 Score = 306 (112.8 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 69/200 (34%), Positives = 118/200 (59%)

Query:     2 LFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGI-KLYAISTTATSKRTILSDLIT 60
             ++SAT P  V++L+  +L+N + ++ +G+ D      I ++  + +    +  ++  L  
Sbjct:   323 MWSATWPKEVRQLASDFLNNYIQVN-IGSMDLSANHRITQIVEVISEFEKRDRMIKHLEK 381

Query:    61 VYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
             +   +G K +VFT TKR ADE++  L      + ++HGD  Q +R+  LN F+ GK  ++
Sbjct:   382 IMENRGNKCLVFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIM 441

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             VATDVA+RG+D+ ++  +I+Y+ PN+ E +VHR GRTGRAG +GTAI  FT+   +  R 
Sbjct:   442 VATDVASRGIDVRDITHVINYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDNAKQARD 501

Query:   179 LERDVGCKFEFVSPPVVEDV 198
             L   +    + + P + E V
Sbjct:   502 LVTILSEAKQQIDPRLAEMV 521


>UNIPROTKB|P21693 [details] [associations]
            symbol:dbpA species:83333 "Escherichia coli K-12"
            [GO:0003724 "RNA helicase activity" evidence=IDA] [GO:0016887
            "ATPase activity" evidence=IDA] [GO:0033677 "DNA/RNA helicase
            activity" evidence=IDA] [GO:0042254 "ribosome biogenesis"
            evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=IDA]
            [GO:0000027 "ribosomal large subunit assembly" evidence=IMP]
            [GO:0034459 "ATP-dependent 3'-5' RNA helicase activity"
            evidence=IDA] [GO:0019843 "rRNA binding" evidence=IDA] [GO:0043531
            "ADP binding" evidence=IDA] [GO:0005524 "ATP binding"
            evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
            GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0043531
            GO:GO:0019843 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            EMBL:X52647 PIR:B64884 RefSeq:NP_415859.1 RefSeq:YP_489613.1
            ProteinModelPortal:P21693 SMR:P21693 IntAct:P21693 PRIDE:P21693
            EnsemblBacteria:EBESCT00000004879 EnsemblBacteria:EBESCT00000014318
            GeneID:12933991 GeneID:947153 KEGG:ecj:Y75_p1320 KEGG:eco:b1343
            PATRIC:32117966 EchoBASE:EB0206 EcoGene:EG10210
            HOGENOM:HOG000268809 KO:K05591 OMA:HIDPARF ProtClustDB:PRK11776
            BioCyc:EcoCyc:EG10210-MONOMER BioCyc:ECOL316407:JW1337-MONOMER
            BioCyc:MetaCyc:EG10210-MONOMER Genevestigator:P21693 GO:GO:0034459
            GO:GO:0033677 InterPro:IPR005580 Pfam:PF03880 Uniprot:P21693
        Length = 457

 Score = 301 (111.0 bits), Expect = 1.3e-26, P = 1.3e-26
 Identities = 73/213 (34%), Positives = 114/213 (53%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSAT P  +  +S +   +PL I++  +  + L   I+     T++  K  +L  L++
Sbjct:   181 LLFSATWPEAIAAISGRVQRDPLAIEI--DSTDALPP-IEQQFYETSSKGKIPLLQRLLS 237

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSIIASE-ALHGDISQHQRERTLNGFRQGKFTVLV 119
             ++ +    +VF  TK+D   V  AL  +  S  +LHGD+ Q  R++TL  F  G   VLV
Sbjct:   238 LH-QPSSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLV 296

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLDI +++L++++EL  DPE  VHR GRT RAG  G AI      + +    +
Sbjct:   297 ATDVAARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANII 356

Query:   180 ERDVGCKFEFVSPPVVEDVLESSAEQVVATLNG 212
                +  K  + +PP    +    AE     ++G
Sbjct:   357 SDMLQIKLNWQTPPANSSIATLEAEMATLCIDG 389


>UNIPROTKB|E1BSE5 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:AADN02041229
            EMBL:AADN02041230 IPI:IPI00819993 Ensembl:ENSGALT00000013903
            ArrayExpress:E1BSE5 Uniprot:E1BSE5
        Length = 402

 Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 67/183 (36%), Positives = 107/183 (58%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SAT+P  + +++ K++ +P+ I LV  +DE   EGIK + ++      K   L DL 
Sbjct:   211 VLISATLPHEILEMTNKFMTDPIRI-LV-KRDELTLEGIKQFFVAVEREEWKFDTLCDLY 268

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  TKR  D ++  +        ++HGD+ Q +RE  +  FR G   VL
Sbjct:   269 DTLTIT-QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVL 327

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             ++TDV ARGLD+P V LII+Y+LPN+ E ++HR GR+GR G++G AI    +   R +R 
Sbjct:   328 ISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRD 387

Query:   179 LER 181
             +E+
Sbjct:   388 IEQ 390


>UNIPROTKB|Q48AV0 [details] [associations]
            symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
            GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
            BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
        Length = 420

 Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 68/182 (37%), Positives = 110/182 (60%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSAT    + K+S+  L  P  +++  ++  K A+ ++       A  KR + S LI 
Sbjct:   185 LLFSATFADDIYKMSKNILVEPKMVEI--DEKNKAADDVEQLVYGVDADRKRELTSFLIG 242

Query:    61 VYAKGGKTI-VFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
               ++  K + VFT+TK+ AD+++  +T   + S A+HGD SQ  RE+ L+ F++GK   L
Sbjct:   243 --SRNWKQVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRAL 300

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             +ATDVAARG+DI  +  +I+YELP + E +VHR GRT RAG  G A+ + +  +   + +
Sbjct:   301 IATDVAARGIDIKGLSHVINYELPYNAEDYVHRIGRTARAGNSGLAVSLVSPGEEWLLTA 360

Query:   179 LE 180
             +E
Sbjct:   361 IE 362


>TIGR_CMR|CPS_0042 [details] [associations]
            symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
            GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
            BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
        Length = 420

 Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 68/182 (37%), Positives = 110/182 (60%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSAT    + K+S+  L  P  +++  ++  K A+ ++       A  KR + S LI 
Sbjct:   185 LLFSATFADDIYKMSKNILVEPKMVEI--DEKNKAADDVEQLVYGVDADRKRELTSFLIG 242

Query:    61 VYAKGGKTI-VFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
               ++  K + VFT+TK+ AD+++  +T   + S A+HGD SQ  RE+ L+ F++GK   L
Sbjct:   243 --SRNWKQVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRAL 300

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             +ATDVAARG+DI  +  +I+YELP + E +VHR GRT RAG  G A+ + +  +   + +
Sbjct:   301 IATDVAARGIDIKGLSHVINYELPYNAEDYVHRIGRTARAGNSGLAVSLVSPGEEWLLTA 360

Query:   179 LE 180
             +E
Sbjct:   361 IE 362


>TAIR|locus:2041549 [details] [associations]
            symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
            EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
            UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
            PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
            KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
            OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
            GermOnline:AT2G42520 Uniprot:Q84W89
        Length = 633

 Score = 306 (112.8 bits), Expect = 1.8e-26, P = 1.8e-26
 Identities = 74/189 (39%), Positives = 110/189 (58%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             +LFSAT P  +++L+  +L N   L +  VG+  + + + ++    S     KR+ L DL
Sbjct:   350 LLFSATFPREIQRLAADFLANYIFLAVGRVGSSTDLIVQRVEFVLDS----DKRSHLMDL 405

Query:    59 ITVYAKGG---K---TIVFTQTKRDADEVS--LALTSIIASEALHGDISQHQRERTLNGF 110
             +    + G   K   T+VF +TKR AD +   L +    A+ ++HGD +Q +RE  L  F
Sbjct:   406 LHAQRENGIQGKQALTLVFVETKRGADSLENWLCINGFPAT-SIHGDRTQQEREVALKAF 464

Query:   111 RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTS 170
             + G+  +LVATDVAARGLDIP+V  +++++LPND + +VHR GRTGRAGK G A   F  
Sbjct:   465 KSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFND 524

Query:   171 SQRRTVRSL 179
                   R L
Sbjct:   525 GNTSLARPL 533


>RGD|2314437 [details] [associations]
            symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked"
            species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
            evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:2314437 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K11594 CTD:8653
            EMBL:FJ775727 IPI:IPI00196210 RefSeq:NP_001161137.1
            UniGene:Rn.95841 ProteinModelPortal:C9WPN2 PRIDE:C9WPN2
            GeneID:100312982 KEGG:rno:100312982 UCSC:RGD:2314437 Uniprot:C9WPN2
        Length = 652

 Score = 306 (112.8 bits), Expect = 2.0e-26, P = 2.0e-26
 Identities = 70/182 (38%), Positives = 101/182 (55%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             M+FSAT P  ++ L+R +LD    L +  VG+  E + + +    +      KR+ L DL
Sbjct:   372 MMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV----VWVEELDKRSFLLDL 427

Query:    59 ITVYAKGGKTIVFTQTKRDADEV-SLALTSIIASEALHGDISQHQRERTLNGFRQGKFTV 117
             +    +   T+VF +TK+ AD + +       A  ++HGD SQ  RE  L+ FR G+  +
Sbjct:   428 LNATGRDSLTLVFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPI 487

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             LVAT VAARGLDI NV  +I+++LP+D E +VHR GRTGR G  G A   F        +
Sbjct:   488 LVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNLNITK 547

Query:   178 SL 179
              L
Sbjct:   548 DL 549


>UNIPROTKB|I3LDV0 [details] [associations]
            symbol:DDX3Y "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:TILWVYE EMBL:FP565155
            Ensembl:ENSSSCT00000028884 Uniprot:I3LDV0
        Length = 667

 Score = 306 (112.8 bits), Expect = 2.1e-26, P = 2.1e-26
 Identities = 73/186 (39%), Positives = 107/186 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             M+FSAT P  ++ L+R +LD    L +  VG+  E + + +    +    + KR+ L DL
Sbjct:   380 MMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV----VWVEESDKRSFLLDL 435

Query:    59 ITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
             +    K   T+VF +TK+ AD +   L     A  ++HGD SQ  RE  L+ FR GK  +
Sbjct:   436 LNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPI 495

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             LVAT VAARGLDI NV  +I+++LP+D E +VHR GRTGR G  G   L  +    R + 
Sbjct:   496 LVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLIGLATSFFNERNI- 554

Query:   178 SLERDV 183
             ++ +D+
Sbjct:   555 NITKDL 560


>UNIPROTKB|G3N2S5 [details] [associations]
            symbol:Bt.75622 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00680000100003 EMBL:DAAA02039547
            Ensembl:ENSBTAT00000065964 Uniprot:G3N2S5
        Length = 546

 Score = 303 (111.7 bits), Expect = 2.3e-26, P = 2.3e-26
 Identities = 85/265 (32%), Positives = 134/265 (50%)

Query:     3 FSATMPSWVKKLSRKYLDNPLN-IDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITV 61
             FSAT   W+  +++KY+ +    +DL+    +K+A  ++  AI    T K  ++ D    
Sbjct:   224 FSATCFHWLCNVAKKYMKSAYEQMDLM----QKMAITVEHLAIKCHRTRKAAVIGDS--- 276

Query:    62 YAKGGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVAT 121
                 G TIVF + K++  E+S  +     +++LH    + QR+ T  GFR G F V V T
Sbjct:   277 -GFQGPTIVFCEMKKETQELSQNVAVRYDAQSLH----RKQRQITRKGFRNGDFGVWVPT 331

Query:   122 DVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLER 181
             +VAARGLDIP V LI    LP D E+ +  S  T R G  G  I      +   +  +E+
Sbjct:   332 NVAARGLDIPEVHLIFQSSLPKDAES-LRSSFWTRRVGMTGICICFSQHKEEYQLAQVEQ 390

Query:   182 DVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGTDALAAAL 241
              VG  F+ +      +++++S E  +  L+ V P ++  F  +A+ L  E+GT   A AL
Sbjct:   391 KVGITFKRIGVRSETEIIKASGEDAIRLLDSVPPAAIGHFEQSAENLTGEQGTLEAATAL 450

Query:   242 AQLSGFSRPPSSRSLINHEQGWVTL 266
                SG +     RS+ N   G+VT+
Sbjct:   451 THFSG-ATSVDQRSVNNSNAGFVTM 474


>UNIPROTKB|Q3SZ54 [details] [associations]
            symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
            species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 EMBL:BC103130
            IPI:IPI00698793 RefSeq:NP_001029400.1 UniGene:Bt.14169
            ProteinModelPortal:Q3SZ54 SMR:Q3SZ54 STRING:Q3SZ54 PRIDE:Q3SZ54
            Ensembl:ENSBTAT00000000144 GeneID:504958 KEGG:bta:504958 CTD:1973
            InParanoid:Q3SZ54 KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1
            NextBio:20866906 Uniprot:Q3SZ54
        Length = 406

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 70/201 (34%), Positives = 115/201 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SATMPS V ++++K++ +P+ I LV  ++E   EGI+ + I+      K   L DL 
Sbjct:   210 VLLSATMPSDVLEVTKKFMRDPIRI-LV-KKEELTLEGIRQFYINVEREEWKLDTLCDLY 267

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  T+R  D ++  + +      A+HGD+ Q +R+  +  FR G   VL
Sbjct:   268 ETLTIT-QAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVL 326

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             + TD+ ARG+D+  V L+I+Y+LP + E ++HR GR GR G++G AI M T   +RT+R 
Sbjct:   327 ITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRD 386

Query:   179 LERDVGCKFEFVSPPVVEDVL 199
             +E       E + P  V D++
Sbjct:   387 IETFYNTSIEEM-PLNVADLI 406


>UNIPROTKB|F1P895 [details] [associations]
            symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00530000062880 OMA:PILEMED EMBL:AAEX03003619
            EMBL:AAEX03003621 EMBL:AAEX03003620 Ensembl:ENSCAFT00000026357
            Uniprot:F1P895
        Length = 406

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 70/201 (34%), Positives = 115/201 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SATMPS V ++++K++ +P+ I LV  ++E   EGI+ + I+      K   L DL 
Sbjct:   210 VLLSATMPSDVLEVTKKFMRDPIRI-LV-KKEELTLEGIRQFYINVEREEWKLDTLCDLY 267

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  T+R  D ++  + +      A+HGD+ Q +R+  +  FR G   VL
Sbjct:   268 ETLTIT-QAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVL 326

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             + TD+ ARG+D+  V L+I+Y+LP + E ++HR GR GR G++G AI M T   +RT+R 
Sbjct:   327 ITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRD 386

Query:   179 LERDVGCKFEFVSPPVVEDVL 199
             +E       E + P  V D++
Sbjct:   387 IETFYNTSIEEM-PLNVADLI 406


>UNIPROTKB|J9NU36 [details] [associations]
            symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 GeneTree:ENSGT00530000062880 EMBL:AAEX03006506
            EMBL:AAEX03006505 Ensembl:ENSCAFT00000049437 Uniprot:J9NU36
        Length = 423

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 70/201 (34%), Positives = 115/201 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SATMPS V ++++K++ +P+ I LV  ++E   EGI+ + I+      K   L DL 
Sbjct:   227 VLLSATMPSDVLEVTKKFMRDPIRI-LV-KKEELTLEGIRQFYINVEREEWKLDTLCDLY 284

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  T+R  D ++  + +      A+HGD+ Q +R+  +  FR G   VL
Sbjct:   285 ETLTIT-QAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVL 343

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             + TD+ ARG+D+  V L+I+Y+LP + E ++HR GR GR G++G AI M T   +RT+R 
Sbjct:   344 ITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRD 403

Query:   179 LERDVGCKFEFVSPPVVEDVL 199
             +E       E + P  V D++
Sbjct:   404 IETFYNTSIEEM-PLNVADLI 423


>UNIPROTKB|J9NY67 [details] [associations]
            symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
            EMBL:AAEX03006506 EMBL:AAEX03006505 RefSeq:NP_001238871.1
            ProteinModelPortal:J9NY67 Ensembl:ENSCAFT00000014379
            GeneID:100688577 KEGG:cfa:100688577 Uniprot:J9NY67
        Length = 406

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 70/201 (34%), Positives = 115/201 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SATMPS V ++++K++ +P+ I LV  ++E   EGI+ + I+      K   L DL 
Sbjct:   210 VLLSATMPSDVLEVTKKFMRDPIRI-LV-KKEELTLEGIRQFYINVEREEWKLDTLCDLY 267

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  T+R  D ++  + +      A+HGD+ Q +R+  +  FR G   VL
Sbjct:   268 ETLTIT-QAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVL 326

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             + TD+ ARG+D+  V L+I+Y+LP + E ++HR GR GR G++G AI M T   +RT+R 
Sbjct:   327 ITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRD 386

Query:   179 LERDVGCKFEFVSPPVVEDVL 199
             +E       E + P  V D++
Sbjct:   387 IETFYNTSIEEM-PLNVADLI 406


>UNIPROTKB|P60842 [details] [associations]
            symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003743 "translation initiation factor
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0019048 "virus-host interaction" evidence=IEA] [GO:0003729
            "mRNA binding" evidence=TAS] [GO:0004386 "helicase activity"
            evidence=TAS] [GO:0000339 "RNA cap binding" evidence=TAS]
            [GO:0008135 "translation factor activity, nucleic acid binding"
            evidence=TAS] [GO:0016281 "eukaryotic translation initiation factor
            4F complex" evidence=TAS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0000288 "nuclear-transcribed mRNA catabolic
            process, deadenylation-dependent decay" evidence=TAS] [GO:0000289
            "nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
            [GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
            evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
            [GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
            metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
            process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
            pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
            process" evidence=TAS] Reactome:REACT_71 Reactome:REACT_21257
            Reactome:REACT_17015 InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
            Reactome:REACT_6900 EMBL:CH471108 GO:GO:0019048
            Pathway_Interaction_DB:mtor_4pathway GO:GO:0006413 GO:GO:0016281
            GO:GO:0031100 GO:GO:0003729 GO:GO:0019221 GO:GO:0008135
            GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG107989 Reactome:REACT_1762 CTD:1973 KO:K03257
            OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:D13748 EMBL:BT019880
            EMBL:BT019881 EMBL:AK312630 EMBL:AC016876 EMBL:BC006210
            EMBL:BC009585 EMBL:BC073752 IPI:IPI00025491 PIR:S33681
            RefSeq:NP_001191439.1 RefSeq:NP_001407.1 UniGene:Hs.129673 PDB:2G9N
            PDB:2ZU6 PDB:3EIQ PDBsum:2G9N PDBsum:2ZU6 PDBsum:3EIQ
            ProteinModelPortal:P60842 SMR:P60842 DIP:DIP-29755N IntAct:P60842
            MINT:MINT-5001111 STRING:P60842 PhosphoSite:P60842 DMDM:46397463
            PaxDb:P60842 PRIDE:P60842 DNASU:1973 Ensembl:ENST00000293831
            Ensembl:ENST00000577269 GeneID:1973 KEGG:hsa:1973 UCSC:uc002gho.2
            GeneCards:GC17P007476 HGNC:HGNC:3282 HPA:CAB011689 MIM:602641
            neXtProt:NX_P60842 PharmGKB:PA27710 PhylomeDB:P60842 ChiTaRS:EIF4A1
            EvolutionaryTrace:P60842 GenomeRNAi:1973 NextBio:7987
            ArrayExpress:P60842 Bgee:P60842 CleanEx:HS_EIF4A1
            Genevestigator:P60842 GermOnline:ENSG00000161960 GO:GO:0000339
            Uniprot:P60842
        Length = 406

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 70/201 (34%), Positives = 115/201 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SATMPS V ++++K++ +P+ I LV  ++E   EGI+ + I+      K   L DL 
Sbjct:   210 VLLSATMPSDVLEVTKKFMRDPIRI-LV-KKEELTLEGIRQFYINVEREEWKLDTLCDLY 267

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  T+R  D ++  + +      A+HGD+ Q +R+  +  FR G   VL
Sbjct:   268 ETLTIT-QAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVL 326

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             + TD+ ARG+D+  V L+I+Y+LP + E ++HR GR GR G++G AI M T   +RT+R 
Sbjct:   327 ITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRD 386

Query:   179 LERDVGCKFEFVSPPVVEDVL 199
             +E       E + P  V D++
Sbjct:   387 IETFYNTSIEEM-PLNVADLI 406


>UNIPROTKB|A6M928 [details] [associations]
            symbol:EIF4A1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003743
            "translation initiation factor activity" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
            GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
            OrthoDB:EOG4640C1 EMBL:CU914279 EMBL:DQ351283 RefSeq:NP_001093666.1
            UniGene:Ssc.22034 ProteinModelPortal:A6M928 SMR:A6M928 PRIDE:A6M928
            Ensembl:ENSSSCT00000019541 GeneID:100101929 KEGG:ssc:100101929
            Uniprot:A6M928
        Length = 406

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 70/201 (34%), Positives = 115/201 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SATMPS V ++++K++ +P+ I LV  ++E   EGI+ + I+      K   L DL 
Sbjct:   210 VLLSATMPSDVLEVTKKFMRDPIRI-LV-KKEELTLEGIRQFYINVEREEWKLDTLCDLY 267

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  T+R  D ++  + +      A+HGD+ Q +R+  +  FR G   VL
Sbjct:   268 ETLTIT-QAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVL 326

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             + TD+ ARG+D+  V L+I+Y+LP + E ++HR GR GR G++G AI M T   +RT+R 
Sbjct:   327 ITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRD 386

Query:   179 LERDVGCKFEFVSPPVVEDVL 199
             +E       E + P  V D++
Sbjct:   387 IETFYNTSIEEM-PLNVADLI 406


>MGI|MGI:95303 [details] [associations]
            symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
            initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:95303 GO:GO:0005524
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 CTD:1973
            KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:X03039 EMBL:X03040
            EMBL:L36611 EMBL:M22873 EMBL:L36608 EMBL:L36609 EMBL:L36610
            EMBL:AB011595 EMBL:AK077429 EMBL:BC049915 IPI:IPI00118676
            PIR:JS0039 RefSeq:NP_659207.1 UniGene:Mm.279821 UniGene:Mm.371557
            UniGene:Mm.473799 ProteinModelPortal:P60843 SMR:P60843
            MINT:MINT-202155 STRING:P60843 PhosphoSite:P60843
            REPRODUCTION-2DPAGE:P60843 PaxDb:P60843 PRIDE:P60843
            Ensembl:ENSMUST00000163666 GeneID:13681 KEGG:mmu:13681
            InParanoid:P60843 NextBio:284438 Bgee:P60843 CleanEx:MM_EIF4A1
            Genevestigator:P60843 GermOnline:ENSMUSG00000064241 Uniprot:P60843
        Length = 406

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 70/201 (34%), Positives = 115/201 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SATMPS V ++++K++ +P+ I LV  ++E   EGI+ + I+      K   L DL 
Sbjct:   210 VLLSATMPSDVLEVTKKFMRDPIRI-LV-KKEELTLEGIRQFYINVEREEWKLDTLCDLY 267

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  T+R  D ++  + +      A+HGD+ Q +R+  +  FR G   VL
Sbjct:   268 ETLTIT-QAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVL 326

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             + TD+ ARG+D+  V L+I+Y+LP + E ++HR GR GR G++G AI M T   +RT+R 
Sbjct:   327 ITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRD 386

Query:   179 LERDVGCKFEFVSPPVVEDVL 199
             +E       E + P  V D++
Sbjct:   387 IETFYNTSIEEM-PLNVADLI 406


>UNIPROTKB|Q6P3V8 [details] [associations]
            symbol:Eif4a1 "Protein Eif4a1" species:10116 "Rattus
            norvegicus" [GO:0003743 "translation initiation factor activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:735141
            GO:GO:0005524 GO:GO:0003743 EMBL:CH473948 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
            GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
            OrthoDB:EOG4640C1 EMBL:BC063812 IPI:IPI00369618 RefSeq:NP_955404.1
            UniGene:Rn.91523 SMR:Q6P3V8 STRING:Q6P3V8
            Ensembl:ENSRNOT00000049048 GeneID:287436 KEGG:rno:287436
            InParanoid:Q6P3V8 NextBio:626135 Genevestigator:Q6P3V8
            Uniprot:Q6P3V8
        Length = 406

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 70/201 (34%), Positives = 115/201 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SATMPS V ++++K++ +P+ I LV  ++E   EGI+ + I+      K   L DL 
Sbjct:   210 VLLSATMPSDVLEVTKKFMRDPIRI-LV-KKEELTLEGIRQFYINVEREEWKLDTLCDLY 267

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  T+R  D ++  + +      A+HGD+ Q +R+  +  FR G   VL
Sbjct:   268 ETLTIT-QAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVL 326

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             + TD+ ARG+D+  V L+I+Y+LP + E ++HR GR GR G++G AI M T   +RT+R 
Sbjct:   327 ITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRD 386

Query:   179 LERDVGCKFEFVSPPVVEDVL 199
             +E       E + P  V D++
Sbjct:   387 IETFYNTSIEEM-PLNVADLI 406


>TAIR|locus:2008296 [details] [associations]
            symbol:AT1G51380 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009560
            "embryo sac egg cell differentiation" evidence=RCA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005730 EMBL:AC024261
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 EMBL:AC006085 KO:K13025
            EMBL:AY058890 EMBL:AY079046 IPI:IPI00529522 PIR:H96551
            RefSeq:NP_175549.1 UniGene:At.11244 ProteinModelPortal:Q9C8J1
            SMR:Q9C8J1 PaxDb:Q9C8J1 PRIDE:Q9C8J1 EnsemblPlants:AT1G51380.1
            GeneID:841562 KEGG:ath:AT1G51380 GeneFarm:1010 TAIR:At1g51380
            InParanoid:Q9C8J1 OMA:DITNITH PhylomeDB:Q9C8J1
            ProtClustDB:CLSN2912843 Genevestigator:Q9C8J1 GermOnline:AT1G51380
            Uniprot:Q9C8J1
        Length = 392

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 71/191 (37%), Positives = 111/191 (58%)

Query:     2 LFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDL-- 58
             L SAT+P  + +++ K++ +P+ I LV   DE   EGIK Y +       K   L DL  
Sbjct:   200 LISATLPQEILEMTEKFMTDPVRI-LV-KPDELTLEGIKQYYVDVDKEEWKFDTLCDLYG 257

Query:    59 -ITVYAKGGKTIVFTQTKRDADEVSLALTS--IIASEALHGDISQHQRERTLNGFRQGKF 115
              +T+     + I+F  T++  D ++  + S   I S ++HGD  Q +R+  +N FR  K 
Sbjct:   258 RLTI----NQAIIFCNTRQKVDWLTEKMRSSNFIVS-SMHGDKRQKERDDIMNQFRSFKS 312

Query:   116 TVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRT 175
              VL+A+DV ARG+D+  V  +I+Y++PN+PE ++HR GR GR G+EG AI    SS  + 
Sbjct:   313 RVLIASDVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGREGVAINFVKSSDMKD 372

Query:   176 VRSLERDVGCK 186
             ++ +ER  G K
Sbjct:   373 LKDIERHYGTK 383


>UNIPROTKB|Q4K4H4 [details] [associations]
            symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
            species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
            EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
            ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
            PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
        Length = 622

 Score = 304 (112.1 bits), Expect = 2.8e-26, P = 2.8e-26
 Identities = 70/182 (38%), Positives = 109/182 (59%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSAT    +  L+ K L NP  I++         E I+       A+ KR +L+ LIT
Sbjct:   188 LLFSATFSKDITDLAGKLLHNPERIEVT--PPNTTVERIEQRVFRLPASHKRALLAHLIT 245

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
               A   + +VFT+TK  A+ ++  L    +++ A+HG+ SQ+ R + L  F+ G+  +LV
Sbjct:   246 AGA-WEQVLVFTRTKHGANRLAEYLDKHGLSAVAIHGNKSQNARTKALADFKAGEVRILV 304

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATD+AARGLDI  +  ++++ELPN  E +VHR GRTGRAG+ G AI +    + + ++S+
Sbjct:   305 ATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEEKLLKSI 364

Query:   180 ER 181
             ER
Sbjct:   365 ER 366


>FB|FBgn0001942 [details] [associations]
            symbol:eIF-4a "Eukaryotic initiation factor 4a" species:7227
            "Drosophila melanogaster" [GO:0003724 "RNA helicase activity"
            evidence=ISS] [GO:0006413 "translational initiation"
            evidence=ISS;NAS] [GO:0016281 "eukaryotic translation initiation
            factor 4F complex" evidence=ISS] [GO:0003743 "translation
            initiation factor activity" evidence=ISS;NAS] [GO:0005829 "cytosol"
            evidence=ISS;NAS] [GO:0017116 "single-stranded DNA-dependent
            ATP-dependent DNA helicase activity" evidence=NAS] [GO:0006268 "DNA
            unwinding involved in replication" evidence=NAS] [GO:0000339 "RNA
            cap binding" evidence=NAS] [GO:0003729 "mRNA binding" evidence=NAS]
            [GO:0007446 "imaginal disc growth" evidence=TAS] [GO:0002168
            "instar larval development" evidence=TAS] [GO:0009950
            "dorsal/ventral axis specification" evidence=IMP] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
            splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
            evidence=IC] [GO:0000022 "mitotic spindle elongation" evidence=IMP]
            [GO:0007052 "mitotic spindle organization" evidence=IMP]
            [GO:0005875 "microtubule associated complex" evidence=IDA]
            [GO:0007067 "mitosis" evidence=IMP] [GO:0006974 "response to DNA
            damage stimulus" evidence=IMP] [GO:0048132 "female germ-line stem
            cell division" evidence=IGI;IMP] [GO:0030718 "germ-line stem cell
            maintenance" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI]
            [GO:0072686 "mitotic spindle" evidence=IDA] [GO:0051297 "centrosome
            organization" evidence=IMP] [GO:0005813 "centrosome" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005813 GO:GO:0005875 GO:GO:0007067 EMBL:AE014134
            GO:GO:0051297 GO:GO:0016281 GO:GO:0006974 GO:GO:0003743
            GO:GO:0030718 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0000022 GO:GO:0072686 GO:GO:0048132 GO:GO:0002168
            GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0007446
            GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ EMBL:X69045
            EMBL:AF145621 EMBL:AY069283 EMBL:AY121623 PIR:S30278
            RefSeq:NP_001245907.1 RefSeq:NP_476595.1 RefSeq:NP_723137.1
            RefSeq:NP_723138.1 RefSeq:NP_723139.1 UniGene:Dm.7226
            ProteinModelPortal:Q02748 SMR:Q02748 DIP:DIP-18113N IntAct:Q02748
            MINT:MINT-892982 STRING:Q02748 PaxDb:Q02748 PRIDE:Q02748
            EnsemblMetazoa:FBtr0079175 EnsemblMetazoa:FBtr0079176
            EnsemblMetazoa:FBtr0079177 EnsemblMetazoa:FBtr0079178
            EnsemblMetazoa:FBtr0307068 EnsemblMetazoa:FBtr0331201 GeneID:33835
            KEGG:dme:Dmel_CG9075 CTD:33835 FlyBase:FBgn0001942
            InParanoid:Q02748 OrthoDB:EOG4B8GVF PhylomeDB:Q02748 ChiTaRS:eIF-4a
            GenomeRNAi:33835 NextBio:785508 Bgee:Q02748 GermOnline:CG9075
            Uniprot:Q02748
        Length = 403

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 66/184 (35%), Positives = 113/184 (61%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SATMP  V ++SR ++ +P++I LV  ++E   EGIK + ++    + K   L DL 
Sbjct:   207 ILLSATMPPDVLEVSRCFMRDPVSI-LV-KKEELTLEGIKQFYVNVKQENWKLGTLCDLY 264

Query:    60 TVYAKGGKTIVFTQTKRDADEVS--LALTSIIASEALHGDISQHQRERTLNGFRQGKFTV 117
                +   ++++F  T+R  D+++  +++ +   S A+HGD+ Q  RE  +  FR G   V
Sbjct:   265 DTLSIT-QSVIFCNTRRKVDQLTQEMSIHNFTVS-AMHGDMEQRDREVIMKQFRSGSSRV 322

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             L+ TD+ ARG+D+  V L+I+Y+LP++ E ++HR GR GR G++G AI   T   RR ++
Sbjct:   323 LITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDDRRILK 382

Query:   178 SLER 181
              +E+
Sbjct:   383 DIEQ 386


>UNIPROTKB|Q83DM8 [details] [associations]
            symbol:rhlE "ATP-dependent RNA helicase" species:227377
            "Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
            RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
            KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
            BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
        Length = 420

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 75/183 (40%), Positives = 110/183 (60%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSAT    +K+L+ K L +P  I+ V  ++   A  I           KR +LS +I 
Sbjct:   195 LLFSATFSKEIKELTDKLLHSPALIE-VARRNTAAAR-ITHVVHPVDRQRKRELLSFMIG 252

Query:    61 VYAKGGKTI-VFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
               +K  + + VFT+TK  A+ +S  L S  ++S A+HG+ SQ  R R L  F+QGK  VL
Sbjct:   253 --SKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGKIRVL 310

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             VATDVAARGLDI  +  +I++ELP+  + +VHR GRTGRA  +G AI + +  + R +R 
Sbjct:   311 VATDVAARGLDIDKLPHVINFELPDAAKDYVHRVGRTGRASNDGVAISLVSGDEVRLLRD 370

Query:   179 LER 181
             +E+
Sbjct:   371 IEK 373


>TIGR_CMR|CBU_0670 [details] [associations]
            symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
            putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
            GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
            ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
            Uniprot:Q83DM8
        Length = 420

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 75/183 (40%), Positives = 110/183 (60%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSAT    +K+L+ K L +P  I+ V  ++   A  I           KR +LS +I 
Sbjct:   195 LLFSATFSKEIKELTDKLLHSPALIE-VARRNTAAAR-ITHVVHPVDRQRKRELLSFMIG 252

Query:    61 VYAKGGKTI-VFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
               +K  + + VFT+TK  A+ +S  L S  ++S A+HG+ SQ  R R L  F+QGK  VL
Sbjct:   253 --SKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGKIRVL 310

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             VATDVAARGLDI  +  +I++ELP+  + +VHR GRTGRA  +G AI + +  + R +R 
Sbjct:   311 VATDVAARGLDIDKLPHVINFELPDAAKDYVHRVGRTGRASNDGVAISLVSGDEVRLLRD 370

Query:   179 LER 181
             +E+
Sbjct:   371 IEK 373


>FB|FBgn0003261 [details] [associations]
            symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
            [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
            splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
            evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
            evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
            [GO:0005875 "microtubule associated complex" evidence=IDA]
            [GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
            chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
            GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
            GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
            EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
            RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
            RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
            RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
            ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
            MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
            EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
            CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
            OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
            Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
        Length = 719

 Score = 305 (112.4 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 71/207 (34%), Positives = 116/207 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSK----RTILS 56
             +++SAT P  VK+L+  +L N + I+ +G+ +      I+         SK    +T+LS
Sbjct:   463 LMWSATWPKEVKQLAEDFLGNYIQIN-IGSLELSANHNIRQVVDVCDEFSKEEKLKTLLS 521

Query:    57 DLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKF 115
             D+       GK I+F +TKR  D +   + S  +   A+HGD SQ +R+  L  FR GK 
Sbjct:   522 DIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKS 581

Query:   116 TVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRT 175
              +LVATDVAARGLD+  +  +I+++ P + E ++HR GRTGR+  +GT+   FT +  + 
Sbjct:   582 NILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQ 641

Query:   176 VRSLERDVGCKFEFVSPPVVEDVLESS 202
              ++L  DV  +      P +E++  +S
Sbjct:   642 AKALV-DVLREANQEINPALENLARNS 667


>RGD|1309586 [details] [associations]
            symbol:RGD1309586 "similar to probable ATP-dependent RNA
            helicase - mouse" species:10116 "Rattus norvegicus" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:1309586 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 KO:K11594 OMA:HIVQECD
            OrthoDB:EOG4S7JPR EMBL:CH473985 IPI:IPI00954695
            RefSeq:NP_001102328.1 UniGene:Rn.218622 Ensembl:ENSRNOT00000003378
            GeneID:364073 KEGG:rno:364073 UCSC:RGD:1309586 CTD:364073
            NextBio:684798 Uniprot:D3ZN21
        Length = 659

 Score = 304 (112.1 bits), Expect = 3.3e-26, P = 3.3e-26
 Identities = 72/182 (39%), Positives = 100/182 (54%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             M+FSAT P  ++ L+R +LD    L +  VG+  E + + +    +      KR+ L DL
Sbjct:   377 MMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV----VWVEEADKRSFLLDL 432

Query:    59 ITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
             +    K    +VF +TK+ AD +   L     A  ++HGD SQ  RE  L+ FR GK  +
Sbjct:   433 LNATGKDSLILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPI 492

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             LVAT VAARGLDI NV  +I+++LP+D E +VHR GRTGR G  G A   F        +
Sbjct:   493 LVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITK 552

Query:   178 SL 179
              L
Sbjct:   553 DL 554


>MGI|MGI:91842 [details] [associations]
            symbol:D1Pas1 "DNA segment, Chr 1, Pasteur Institute 1"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275 "multicellular
            organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:91842
            GO:GO:0007275 GO:GO:0005524 GO:GO:0030154 GO:GO:0003677
            GO:GO:0007283 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
            KO:K11594 HOVERGEN:HBG015893 EMBL:J04847 EMBL:AK029542
            IPI:IPI00133708 PIR:A32378 RefSeq:NP_149068.1 UniGene:Mm.108054
            ProteinModelPortal:P16381 SMR:P16381 IntAct:P16381 STRING:P16381
            PhosphoSite:P16381 PaxDb:P16381 PRIDE:P16381
            Ensembl:ENSMUST00000045108 GeneID:110957 KEGG:mmu:110957 CTD:110957
            InParanoid:P16381 OMA:HIVQECD OrthoDB:EOG4S7JPR NextBio:365019
            Bgee:P16381 CleanEx:MM_D1PAS1 Genevestigator:P16381
            GermOnline:ENSMUSG00000039224 Uniprot:P16381
        Length = 660

 Score = 304 (112.1 bits), Expect = 3.3e-26, P = 3.3e-26
 Identities = 72/182 (39%), Positives = 100/182 (54%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             M+FSAT P  ++ L+R +LD    L +  VG+  E + + +    +      KR+ L DL
Sbjct:   378 MMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV----VWVEEADKRSFLLDL 433

Query:    59 ITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
             +    K    +VF +TK+ AD +   L     A  ++HGD SQ  RE  L+ FR GK  +
Sbjct:   434 LNATGKDSLILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPI 493

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             LVAT VAARGLDI NV  +I+++LP+D E +VHR GRTGR G  G A   F        +
Sbjct:   494 LVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITK 553

Query:   178 SL 179
              L
Sbjct:   554 DL 555


>POMBASE|SPAC823.08c [details] [associations]
            symbol:SPAC823.08c "ATP-dependent RNA helicase Rrp3
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
            "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
            processing" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 PomBase:SPAC823.08c GO:GO:0005829
            GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
            OrthoDB:EOG4ZPJ3P RefSeq:NP_593835.1 ProteinModelPortal:Q9P6N8
            SMR:Q9P6N8 STRING:Q9P6N8 EnsemblFungi:SPAC823.08c.1 GeneID:2543571
            KEGG:spo:SPAC823.08c NextBio:20804578 Uniprot:Q9P6N8
        Length = 465

 Score = 298 (110.0 bits), Expect = 3.6e-26, P = 3.6e-26
 Identities = 71/189 (37%), Positives = 107/189 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSATM S V+KL R  L  P+ +  V ++   +   I+ Y +      K T L  L+ 
Sbjct:   224 LLFSATMTSKVEKLQRASLHQPVRV-AVSSKFSTVDTLIQRY-LFFPFKHKDTYLVYLVN 281

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
               A G   I+F +T  D   +++ L ++  ++  LHG +SQ  R   LN F+ G  + LV
Sbjct:   282 ELA-GNSIIIFARTVNDTQRLAILLRTLGFSAIPLHGQLSQSNRLGALNKFKSGARSTLV 340

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLDIP VD++I+Y++P D + ++HR GRT RAG+ G +I + T         +
Sbjct:   341 ATDVAARGLDIPLVDVVINYDIPTDSKAYIHRVGRTARAGRAGKSIALVTQYDLEPFLRI 400

Query:   180 ERDVGCKFE 188
             E  +G K +
Sbjct:   401 EATIGKKMQ 409


>ZFIN|ZDB-GENE-980526-150 [details] [associations]
            symbol:pl10 "pl10" species:7955 "Danio rerio"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            ZFIN:ZDB-GENE-980526-150 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 KO:K11594 HOVERGEN:HBG015893
            EMBL:BC059794 IPI:IPI00483337 RefSeq:NP_571016.2 UniGene:Dr.75779
            ProteinModelPortal:Q6PBB2 SMR:Q6PBB2 GeneID:30116 KEGG:dre:30116
            CTD:30116 InParanoid:Q6PBB2 NextBio:20806595 ArrayExpress:Q6PBB2
            Uniprot:Q6PBB2
        Length = 688

 Score = 304 (112.1 bits), Expect = 3.7e-26, P = 3.7e-26
 Identities = 71/182 (39%), Positives = 102/182 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             M+FSAT P  ++ L+R +L++   L +  VG+  E + + +    +      KR+ L DL
Sbjct:   411 MMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENITQKV----VWVEENDKRSFLLDL 466

Query:    59 ITVYAKGGKTIVFTQTKRDADEVSLAL-TSIIASEALHGDISQHQRERTLNGFRQGKFTV 117
             +    K   T+VF +TK+ AD +   L     A  ++HGD SQ  RE  L+ FR G+  +
Sbjct:   467 LNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPI 526

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             LVAT VAARGLDI NV  +I+++LP+D E +VHR GRTGR G  G A   F        +
Sbjct:   527 LVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNGNITK 586

Query:   178 SL 179
              L
Sbjct:   587 DL 588


>TAIR|locus:2076436 [details] [associations]
            symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
            EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
            RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
            SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
            EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
            GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
            ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
            Uniprot:Q9M2F9
        Length = 646

 Score = 303 (111.7 bits), Expect = 4.1e-26, P = 4.1e-26
 Identities = 72/189 (38%), Positives = 108/189 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             MLFSAT P  +++L+  +L N   L +  VG+  + + + ++    S     KR+ L DL
Sbjct:   337 MLFSATFPREIQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEFVHDS----DKRSHLMDL 392

Query:    59 ITVYAKGGK------TIVFTQTKRDADEVS--LALTSIIASEALHGDISQHQRERTLNGF 110
             +    + G       T+VF +TK+ AD +   L +    A+  +HGD SQ +RE  L  F
Sbjct:   393 LHAQRENGNQGKQALTLVFVETKKGADSLENWLCINGFPAT-TIHGDRSQQEREVALRSF 451

Query:   111 RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTS 170
             + G+  +LVATDVAARGLDIP+V  +++++LPND + +VHR GRTGRAG  G A   F  
Sbjct:   452 KTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLATAFFND 511

Query:   171 SQRRTVRSL 179
             +     + L
Sbjct:   512 NNTTMAKPL 520


>CGD|CAL0003204 [details] [associations]
            symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
            "nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
            EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
            ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
            GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
            Uniprot:Q59LU0
        Length = 562

 Score = 301 (111.0 bits), Expect = 4.3e-26, P = 4.3e-26
 Identities = 65/177 (36%), Positives = 109/177 (61%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGI-KLYAISTTATSKRTILSDLI 59
             +++SAT P  V++L+R YL++P+ +  +G+ +   +  I +L  +    + +  ++  L 
Sbjct:   309 LMWSATWPKEVQQLTRDYLNDPIQVT-IGSLELAASHTITQLVEVIDEFSKRDRLVKHLE 367

Query:    60 TVY-AKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
             +    K  K +VF  TKR  DE++  L S    + A+HGD  Q++R+  L+ FR+GK ++
Sbjct:   368 SALNEKDNKILVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKGKTSI 427

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRR 174
             +VATDVAARG+D+  +  +I+Y++P + E +VHR GRTGR G  GTAI  FT    +
Sbjct:   428 MVATDVAARGIDVKGITHVINYDMPGNIEDYVHRIGRTGRGGASGTAISFFTEGNSK 484


>GENEDB_PFALCIPARUM|PFL0100c [details] [associations]
            symbol:PFL0100c "ATP dependent RNA helicase,
            putative" species:5833 "Plasmodium falciparum" [GO:0016070 "RNA
            metabolic process" evidence=ISS] [GO:0004004 "ATP-dependent RNA
            helicase activity" evidence=ISS] [GO:0005575 "cellular_component"
            evidence=ND] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014188 GO:GO:0016070 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 KO:K01509
            RefSeq:XP_001350429.2 GeneID:811073 KEGG:pfa:PFL0100c
            EuPathDB:PlasmoDB:PF3D7_1202000 HOGENOM:HOG000281143
            ProtClustDB:CLSZ2433078 Uniprot:Q8I625
        Length = 841

 Score = 305 (112.4 bits), Expect = 4.5e-26, P = 4.5e-26
 Identities = 69/213 (32%), Positives = 117/213 (54%)

Query:    64 KGGKTIVFTQTKRDADEVSLALTSIIASEA--LHGDISQHQRERTLNGFRQGKFTVLVAT 121
             K  K I+F  TK + ++  L   S++   A  +H ++   Q+   +N F+ GK  VL+ T
Sbjct:   505 KINKCIIFANTKEEVEK--LYEISLLKPHAVMMHSELLTIQKNENINLFKVGKKNVLITT 562

Query:   122 DVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLER 181
             D+ +RGLDI NV  I++Y  P  P  ++HRSGRTGR  ++G  + M+   + R V  + +
Sbjct:   563 DIISRGLDIDNVIFILNYSPPTSPNDYIHRSGRTGRGKEKGICLTMYHKYEYRNVDKIMK 622

Query:   182 DVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGTDALAAAL 241
                 KFE +  P VEDV + S +++V  +  + PE  EFF   ++ L+++  T  +A  L
Sbjct:   623 YTKNKFEVILCPKVEDVYKFSVDKLVENVMKIAPEKYEFFNEKSKELLKKHNTKIIAQIL 682

Query:   242 AQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAF 274
             + L  F +     SL++ ++ +V + L +D  F
Sbjct:   683 SILLKFDKKSFDVSLLSGKKNYVAV-LIKDPFF 714


>UNIPROTKB|Q8I625 [details] [associations]
            symbol:PFL0100c "ATP-dependent RNA Helicase, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005575
            "cellular_component" evidence=ND] [GO:0016070 "RNA metabolic
            process" evidence=ISS] InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0003676 EMBL:AE014188 GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            KO:K01509 RefSeq:XP_001350429.2 GeneID:811073 KEGG:pfa:PFL0100c
            EuPathDB:PlasmoDB:PF3D7_1202000 HOGENOM:HOG000281143
            ProtClustDB:CLSZ2433078 Uniprot:Q8I625
        Length = 841

 Score = 305 (112.4 bits), Expect = 4.5e-26, P = 4.5e-26
 Identities = 69/213 (32%), Positives = 117/213 (54%)

Query:    64 KGGKTIVFTQTKRDADEVSLALTSIIASEA--LHGDISQHQRERTLNGFRQGKFTVLVAT 121
             K  K I+F  TK + ++  L   S++   A  +H ++   Q+   +N F+ GK  VL+ T
Sbjct:   505 KINKCIIFANTKEEVEK--LYEISLLKPHAVMMHSELLTIQKNENINLFKVGKKNVLITT 562

Query:   122 DVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLER 181
             D+ +RGLDI NV  I++Y  P  P  ++HRSGRTGR  ++G  + M+   + R V  + +
Sbjct:   563 DIISRGLDIDNVIFILNYSPPTSPNDYIHRSGRTGRGKEKGICLTMYHKYEYRNVDKIMK 622

Query:   182 DVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGTDALAAAL 241
                 KFE +  P VEDV + S +++V  +  + PE  EFF   ++ L+++  T  +A  L
Sbjct:   623 YTKNKFEVILCPKVEDVYKFSVDKLVENVMKIAPEKYEFFNEKSKELLKKHNTKIIAQIL 682

Query:   242 AQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAF 274
             + L  F +     SL++ ++ +V + L +D  F
Sbjct:   683 SILLKFDKKSFDVSLLSGKKNYVAV-LIKDPFF 714


>UNIPROTKB|E2RRQ7 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
            Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
        Length = 706

 Score = 303 (111.7 bits), Expect = 5.1e-26, P = 5.1e-26
 Identities = 74/184 (40%), Positives = 103/184 (55%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             M+FSAT P  ++ L+R +LD    L +  VG+  E + + +    +    + KR+ L DL
Sbjct:   421 MMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV----VWVEESDKRSFLLDL 476

Query:    59 I--TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKF 115
             +  T   K   T+VF +TK+ AD +   L     A  ++HGD SQ  RE  L+ FR GK 
Sbjct:   477 LNATESGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKS 536

Query:   116 TVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRT 175
              +LVAT VAARGLDI NV  +I+++LP+D E +VHR GRTGR G  G A   F       
Sbjct:   537 PILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINI 596

Query:   176 VRSL 179
              + L
Sbjct:   597 TKDL 600


>UNIPROTKB|D3IVZ2 [details] [associations]
            symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
            EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
            Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
        Length = 661

 Score = 302 (111.4 bits), Expect = 5.5e-26, P = 5.5e-26
 Identities = 71/171 (41%), Positives = 97/171 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             M+FSAT P  ++ L+R +LD    L +  VG+  E + + +    +      KR+ L DL
Sbjct:   379 MMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV----VWVEEADKRSFLLDL 434

Query:    59 ITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
             +        T+VF +TK+ AD +   L     A  ++HGD SQ  RE  L+ FR GK  +
Sbjct:   435 LNATGTDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPI 494

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMF 168
             LVAT VAARGLDI NV  +I+++LP D E +VHR GRTGR G  G A   F
Sbjct:   495 LVATAVAARGLDISNVKHVINFDLPGDIEEYVHRIGRTGRVGNLGLATSFF 545


>UNIPROTKB|B4DXX7 [details] [associations]
            symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
            sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
            UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
            IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
            UCSC:uc011nar.1 Uniprot:B4DXX7
        Length = 657

 Score = 301 (111.0 bits), Expect = 7.0e-26, P = 7.0e-26
 Identities = 71/182 (39%), Positives = 100/182 (54%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             M+FSAT P  ++ L+R +LD    L +  VG+  E + + +    +      KR+ L D+
Sbjct:   374 MMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV----VWVEDLDKRSFLLDI 429

Query:    59 ITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
             +        T+VF +TK+ AD +   L     A  ++HGD SQ  RE  L+ FR GK  +
Sbjct:   430 LGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPI 489

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             LVAT VAARGLDI NV  +I+++LP+D E +VHR GRTGR G  G A   F        +
Sbjct:   490 LVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITK 549

Query:   178 SL 179
              L
Sbjct:   550 DL 551


>UNIPROTKB|O15523 [details] [associations]
            symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
            HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
            HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
            EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
            RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
            SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
            PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
            Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
            KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
            HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
            InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
            NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
            Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
        Length = 660

 Score = 301 (111.0 bits), Expect = 7.1e-26, P = 7.1e-26
 Identities = 71/182 (39%), Positives = 100/182 (54%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             M+FSAT P  ++ L+R +LD    L +  VG+  E + + +    +      KR+ L D+
Sbjct:   377 MMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV----VWVEDLDKRSFLLDI 432

Query:    59 ITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
             +        T+VF +TK+ AD +   L     A  ++HGD SQ  RE  L+ FR GK  +
Sbjct:   433 LGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPI 492

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             LVAT VAARGLDI NV  +I+++LP+D E +VHR GRTGR G  G A   F        +
Sbjct:   493 LVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITK 552

Query:   178 SL 179
              L
Sbjct:   553 DL 554


>WB|WBGene00018776 [details] [associations]
            symbol:F53H1.1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0040010 "positive regulation of growth rate"
            evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
            "morphogenesis of an epithelium" evidence=IMP] [GO:0040035
            "hermaphrodite genitalia development" evidence=IMP] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
            [GO:0040018 "positive regulation of multicellular organism growth"
            evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
            "growth" evidence=IMP] [GO:0002119 "nematode larval development"
            evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
            GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
            GO:GO:0002119 GO:GO:0040011 GO:GO:0040018 GO:GO:0003676
            GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HSSP:P10081 GeneTree:ENSGT00610000086076 KO:K12811
            HOGENOM:HOG000007229 OMA:IEEENKF EMBL:FO081458
            RefSeq:NP_001033411.1 ProteinModelPortal:Q965K2 SMR:Q965K2
            PaxDb:Q965K2 PRIDE:Q965K2 EnsemblMetazoa:F53H1.1 GeneID:176943
            KEGG:cel:CELE_F53H1.1 UCSC:F53H1.1 CTD:176943 WormBase:F53H1.1
            InParanoid:Q965K2 NextBio:894678 ArrayExpress:Q965K2 Uniprot:Q965K2
        Length = 970

 Score = 304 (112.1 bits), Expect = 7.5e-26, P = 7.5e-26
 Identities = 74/192 (38%), Positives = 108/192 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSAT P  ++ L+RK LD P+ I LVG +    ++ I   A+      K   L +L+ 
Sbjct:   489 VLFSATFPRHMEALARKVLDKPVEI-LVGGKSVVCSD-ITQNAVICAEHQKFLKLLELLG 546

Query:    61 VYAKGGKTIVFTQTKRDADEV--SLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVL 118
             +Y + G +IVF   +  AD++   L  T   +   LHG I QH R+ ++  F+ G   VL
Sbjct:   547 MYYEEGSSIVFVDKQEKADDIVDQLMRTGYNSVAPLHGGIDQHDRDSSIADFKTGVIKVL 606

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAI-LMFTSSQRRTVR 177
             VAT VAARGLD+ N+ L+++Y+ PN  E +VHR GRTGRAG++G A   +    Q +   
Sbjct:   607 VATSVAARGLDVKNLILVVNYDCPNHYEDYVHRVGRTGRAGRKGYAYTFVLPEHQEKMAG 666

Query:   178 SLER---DVGCK 186
              + R     GCK
Sbjct:   667 EICRAFETAGCK 678


>TAIR|locus:2091191 [details] [associations]
            symbol:EIF4A-III "eukaryotic initiation factor 4A-III"
            species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
            [GO:0016020 "membrane" evidence=IDA] [GO:0001666 "response to
            hypoxia" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006397 "mRNA
            processing" evidence=IPI] [GO:0016607 "nuclear speck" evidence=IDA]
            [GO:0035145 "exon-exon junction complex" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020
            GO:GO:0016607 GO:GO:0001666 GO:GO:0006397 GO:GO:0003723
            EMBL:AP000417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 GO:GO:0035145 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K13025
            OMA:EDWKFDT EMBL:AJ010456 EMBL:AY050367 EMBL:BT002207
            IPI:IPI00522986 PIR:T51737 RefSeq:NP_188610.1 UniGene:At.22577
            ProteinModelPortal:Q94A52 SMR:Q94A52 STRING:Q94A52 PaxDb:Q94A52
            PRIDE:Q94A52 EnsemblPlants:AT3G19760.1 GeneID:821513
            KEGG:ath:AT3G19760 GeneFarm:908 TAIR:At3g19760 InParanoid:Q94A52
            PhylomeDB:Q94A52 ProtClustDB:CLSN2915442 Genevestigator:Q94A52
            GermOnline:AT3G19760 Uniprot:Q94A52
        Length = 408

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 69/200 (34%), Positives = 113/200 (56%)

Query:     2 LFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLIT 60
             L SAT+P  + +++ K++  P+ I LV  +DE   EGIK + ++      K   L DL  
Sbjct:   213 LVSATLPHEILEMTSKFMTEPVKI-LV-KRDELTLEGIKQFFVAVEKEEWKFDTLCDLYD 270

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                   + ++F  TKR  D +S  + S      ++HGD+ Q +R+  +N FR G   VL+
Sbjct:   271 TLTIT-QAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLI 329

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
              TDV ARG+D+  V L+I+Y+LPN+ E ++HR GR+GR G++G AI    S   + +R +
Sbjct:   330 TTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDI 389

Query:   180 ERDVGCKFEFVSPPVVEDVL 199
             E+    + + + P  V D++
Sbjct:   390 EQYYSTQIDEM-PMNVADLI 408


>ZFIN|ZDB-GENE-031030-2 [details] [associations]
            symbol:eif4a1a "eukaryotic translation initiation
            factor 4A, isoform 1A" species:7955 "Danio rerio" [GO:0004386
            "helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0006413
            "translational initiation" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-031030-2 GO:GO:0005524 GO:GO:0003743
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG107989 HSSP:P10081 GeneTree:ENSGT00530000062880
            KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:CR848032 EMBL:BC048899
            IPI:IPI00502344 RefSeq:NP_938180.1 UniGene:Dr.75120 SMR:Q802C9
            STRING:Q802C9 Ensembl:ENSDART00000058913 GeneID:386634
            KEGG:dre:386634 CTD:386634 InParanoid:Q802C9 NextBio:20813962
            Uniprot:Q802C9
        Length = 406

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 66/182 (36%), Positives = 106/182 (58%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SATMP  V +++ K++ +P+ I LV  ++E   EGI+ + I+      K   L DL 
Sbjct:   210 ILLSATMPQEVLEVTTKFMRDPVRI-LV-KKEELTLEGIRQFYINVEKEEWKLDTLCDLY 267

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  T+R  D ++  + +      ALHGD+ Q +R+  +  FR G   VL
Sbjct:   268 ETLTIT-QAVIFINTRRKVDWLTEKMHARDFTVSALHGDMEQKERDVIMKEFRSGSSRVL 326

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             + TD+ ARG+D+  V L+I+Y+LP + E ++HR GR GR G++G AI M T   +RT+R 
Sbjct:   327 ITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMITEDDKRTLRD 386

Query:   179 LE 180
             +E
Sbjct:   387 IE 388


>TAIR|locus:2057640 [details] [associations]
            symbol:AT2G33730 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0006486 "protein glycosylation"
            evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
            GO:GO:0006397 GO:GO:0003723 EMBL:U78721 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HOGENOM:HOG000268796
            OMA:PIRNWKE EMBL:AY065194 EMBL:AY093244 IPI:IPI00525282 PIR:H84748
            RefSeq:NP_180929.1 UniGene:At.27506 ProteinModelPortal:P93008
            SMR:P93008 STRING:P93008 PaxDb:P93008 PRIDE:P93008
            EnsemblPlants:AT2G33730.1 GeneID:817938 KEGG:ath:AT2G33730
            GeneFarm:938 TAIR:At2g33730 InParanoid:P93008 PhylomeDB:P93008
            ProtClustDB:CLSN2683508 Genevestigator:P93008 GermOnline:AT2G33730
            Uniprot:P93008
        Length = 733

 Score = 301 (111.0 bits), Expect = 9.1e-26, P = 9.1e-26
 Identities = 73/170 (42%), Positives = 98/170 (57%)

Query:     2 LFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITV 61
             +FSATMP  V++L+RKYL NP+ +  +G    K  + I  + I    + K   L  L+  
Sbjct:   516 MFSATMPPGVERLARKYLRNPVVVT-IGTAG-KTTDLISQHVIMMKESEKFFRLQKLLDE 573

Query:    62 YAKGGKT-IVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                G KT IVF  TK++ D ++  L         LHG  SQ QRE +L GFR  ++ VLV
Sbjct:   574 L--GEKTAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLV 631

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 169
             ATDV  RG+DIP+V  +I+Y++P   E + HR GRTGRAGK G A    T
Sbjct:   632 ATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGVATSFLT 681


>SGD|S000005056 [details] [associations]
            symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
            protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
            "nuclear polyadenylation-dependent mRNA catabolic process"
            evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
            ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
            evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0000184 "nuclear-transcribed mRNA catabolic process,
            nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
            "rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003724 "RNA helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
            GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
            OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
            RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
            SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
            STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
            GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
            CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
            Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
        Length = 546

 Score = 297 (109.6 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 64/176 (36%), Positives = 104/176 (59%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +++SAT P  VK+L+  YL++P+ +  VG+ +   +  I       +   KR  L+  + 
Sbjct:   295 LMWSATWPKEVKQLAADYLNDPIQVQ-VGSLELSASHNITQIVEVVSDFEKRDRLNKYLE 353

Query:    61 VYAKGG--KTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
               ++    KT++F  TKR  D+++  L      + A+HGD  Q +R+  L  FR G+  +
Sbjct:   354 TASQDNEYKTLIFASTKRMCDDITKYLREDGWPALAIHGDKDQRERDWVLQEFRNGRSPI 413

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQR 173
             +VATDVAARG+D+  ++ +I+Y++P + E +VHR GRTGRAG  GTAI  FT   +
Sbjct:   414 MVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNK 469


>SGD|S000002428 [details] [associations]
            symbol:FAL1 "Nucleolar protein required for maturation of 18S
            rRNA" species:4932 "Saccharomyces cerevisiae" [GO:0005730
            "nucleolus" evidence=IEA;IDA] [GO:0042254 "ribosome biogenesis"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
            rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0097078 "FAl1-SGD1 complex" evidence=IPI] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
            processing" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 SGD:S000002428 GO:GO:0005524
            GO:GO:0005730 EMBL:BK006938 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 EMBL:X95966
            EMBL:Z49770 GeneTree:ENSGT00680000100003 GO:GO:0000462 KO:K13025
            OrthoDB:EOG4HTD1W EMBL:Z74317 EMBL:AY723767 PIR:S54644
            RefSeq:NP_010304.3 RefSeq:NP_010309.3 ProteinModelPortal:Q12099
            SMR:Q12099 DIP:DIP-4516N IntAct:Q12099 MINT:MINT-503789
            STRING:Q12099 PaxDb:Q12099 PeptideAtlas:Q12099 EnsemblFungi:YDR021W
            GeneID:851584 GeneID:851590 KEGG:sce:YDR021W KEGG:sce:YDR026C
            CYGD:YDR021w KO:K09424 OMA:IFGKQPF NextBio:969055
            Genevestigator:Q12099 GermOnline:YDR021W GO:GO:0097078
            Uniprot:Q12099
        Length = 399

 Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 66/183 (36%), Positives = 109/183 (59%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             ++ SATM   + +++RK++++P+ I LV  +DE   EGIK Y ++      K   L D+ 
Sbjct:   203 VVVSATMNKDILEVTRKFMNDPVKI-LV-KRDEISLEGIKQYVVNVDKEEWKFDTLCDIY 260

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  TK+  D +S  L  S  A  ++HGD+ Q +R++ +N FR G   VL
Sbjct:   261 DSLTIT-QCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVL 319

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             ++TDV ARG+D+  V L+I+Y+LP   E ++HR GR+GR G++G AI   T +    +R 
Sbjct:   320 ISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKADLAKLRE 379

Query:   179 LER 181
             +E+
Sbjct:   380 IEK 382


>ZFIN|ZDB-GENE-040426-915 [details] [associations]
            symbol:eif4a3 "eukaryotic translation initiation
            factor 4A, isoform 3" species:7955 "Danio rerio" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0000184 "nuclear-transcribed mRNA catabolic process,
            nonsense-mediated decay" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006417 "regulation of
            translation" evidence=IEA] [GO:0016607 "nuclear speck"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040426-915
            GO:GO:0005524 GO:GO:0005737 GO:GO:0006417 GO:GO:0000184
            GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
            GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
            OrthoDB:EOG4229JV EMBL:BC045939 IPI:IPI00481285 RefSeq:NP_957372.1
            UniGene:Dr.78203 ProteinModelPortal:Q7ZVA6 SMR:Q7ZVA6 STRING:Q7ZVA6
            PRIDE:Q7ZVA6 GeneID:394053 KEGG:dre:394053 InParanoid:Q7ZVA6
            NextBio:20815014 ArrayExpress:Q7ZVA6 Uniprot:Q7ZVA6
        Length = 406

 Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 69/200 (34%), Positives = 113/200 (56%)

Query:     2 LFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLIT 60
             L SAT+P  + +++ K++ +P+ I LV  +DE   EGIK + ++      K   L DL  
Sbjct:   211 LISATLPHEILEMTNKFMTDPIRI-LV-KRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 268

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                   + ++F  TKR  D ++  +        ++HGD+ Q +RE  +  FR G   VL+
Sbjct:   269 TLTIT-QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 327

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             +TDV ARGLD+  V LII+Y+LPN+ E ++HR GR+GR G++G AI    +   R +R +
Sbjct:   328 STDVWARGLDVSQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDI 387

Query:   180 ERDVGCKFEFVSPPVVEDVL 199
             E+    + + + P  V D++
Sbjct:   388 EQYYSTQIDEM-PMNVADLI 406


>WB|WBGene00002244 [details] [associations]
            symbol:laf-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP] [GO:0042006
            "masculinization of hermaphroditic germ-line" evidence=IMP]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
            GO:GO:0040007 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
            HOGENOM:HOG000268804 KO:K11594 GO:GO:0042006 EMBL:FO081822
            EMBL:FJ348231 RefSeq:NP_001254859.1 UniGene:Cel.25045
            ProteinModelPortal:D0PV95 SMR:D0PV95 GeneID:190611
            KEGG:cel:CELE_Y71H2AM.19 CTD:190611 WormBase:Y71H2AM.19b
            ArrayExpress:D0PV95 Uniprot:D0PV95
        Length = 708

 Score = 300 (110.7 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 71/182 (39%), Positives = 102/182 (56%)

Query:     2 LFSATMPSWVKKLSRKYL-DNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             +FSAT P  ++ L++ +L +N   L +  VG+  E + + I    +      KR+ L DL
Sbjct:   430 MFSATFPKEIQLLAQDFLKENYVFLAVGRVGSTSENIMQKI----VWVEEDEKRSYLMDL 485

Query:    59 ITVYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHGDISQHQRERTLNGFRQGKFTV 117
             +        T+VF +TKR A +++  L         +HGD+ Q +RE+ L+ FR G   +
Sbjct:   486 LDATGDSSLTLVFVETKRGASDLAYYLNRQNYEVVTIHGDLKQFEREKHLDLFRTGTAPI 545

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             LVAT VAARGLDIPNV  +I+Y+LP+D + +VHR GRTGR G  G A   F    R   R
Sbjct:   546 LVATAVAARGLDIPNVKHVINYDLPSDVDEYVHRIGRTGRVGNVGLATSFFNDKNRNIAR 605

Query:   178 SL 179
              L
Sbjct:   606 EL 607


>WB|WBGene00006888 [details] [associations]
            symbol:vbh-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
            growth rate" evidence=IMP] [GO:0032502 "developmental process"
            evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
            evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
            germ-line" evidence=IMP] [GO:0042127 "regulation of cell
            proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
            evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
            GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
            GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
            HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
            GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
            ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
            MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
            EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
            GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
            WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
            ArrayExpress:Q65XX1 Uniprot:Q65XX1
        Length = 660

 Score = 299 (110.3 bits), Expect = 1.2e-25, P = 1.2e-25
 Identities = 72/181 (39%), Positives = 104/181 (57%)

Query:     2 LFSATMPSWVKKLSRKYL-DNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +FSAT P  ++ L++ +L DN + +  VG      +E I+   +      KR+ L +++ 
Sbjct:   336 MFSATFPKEIQVLAKDFLKDNYIFL-AVGRVGST-SENIEQRLLWVNEMEKRSNLMEILM 393

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                     +VF +TKR A+E++  L    I S ++HGD+ Q +RER L  FR G+  +LV
Sbjct:   394 NEHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERNLELFRSGQCPILV 453

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             AT VAARGLDIPNV  +I+Y+LP D + +VHR GRTGR G  G A   F    R   R L
Sbjct:   454 ATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDL 513

Query:   180 E 180
             +
Sbjct:   514 K 514


>TIGR_CMR|CPS_2658 [details] [associations]
            symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
            GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
            ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
            PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
            Uniprot:Q480Z7
        Length = 399

 Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 67/185 (36%), Positives = 102/185 (55%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSATMP+ ++ L+   L +P  I +             +Y +  +  +K  +L +++T
Sbjct:   184 LLFSATMPAEIEILAEAILTDPTKIQITAETVTIDLVNQSVYHLDKS--NKVPLLFNILT 241

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
               A   K ++F +TK  AD +  AL    I + +LH   +Q  RE  L  F+     VLV
Sbjct:   242 K-ADYEKVLIFCKTKYGADIIVKALEKASITAASLHSGKTQAVREEALQNFKDSTLRVLV 300

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARG+D+ N+ L+I+Y LP DP  ++HR GRT RAGK G AI     +  R + ++
Sbjct:   301 ATDVAARGIDVDNITLVINYNLPEDPRNYIHRIGRTARAGKSGMAISFAVENDIRQLTNI 360

Query:   180 ERDVG 184
             E  +G
Sbjct:   361 ENSIG 365


>ZFIN|ZDB-GENE-030131-1565 [details] [associations]
            symbol:ddx3 "DEAD (Asp-Glu-Ala-Asp) box
            polypeptide 3" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
            "cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-030131-1565 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            KO:K11594 HOVERGEN:HBG015893 EMBL:BX545856 IPI:IPI00639693
            RefSeq:NP_001119895.1 UniGene:Dr.104653 SMR:B0S6P6
            Ensembl:ENSDART00000006867 GeneID:566947 KEGG:dre:566947 CTD:566947
            OMA:IIMGNIN NextBio:20888452 Uniprot:B0S6P6
        Length = 709

 Score = 299 (110.3 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 69/182 (37%), Positives = 101/182 (55%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             M+FSAT P  ++ L+R +L+    L +  VG+  E + + +    +      KR+ L DL
Sbjct:   427 MMFSATFPKEIQILARDFLEEYIFLAVGRVGSTSENITQKV----VWVEENDKRSFLLDL 482

Query:    59 ITVYAKGGKTIVFTQTKRDADEVSLAL-TSIIASEALHGDISQHQRERTLNGFRQGKFTV 117
             +    K   T+VF +TK+ AD +   L     A  ++HGD SQ  RE  L+ FR G+  +
Sbjct:   483 LNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPI 542

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             +VAT VAARGLDI NV  +I+++LP+D E +VHR GRTGR G  G A   +        +
Sbjct:   543 MVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFYNDKNSNITK 602

Query:   178 SL 179
              L
Sbjct:   603 DL 604


>WB|WBGene00012059 [details] [associations]
            symbol:T26G10.1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0000003
            "reproduction" evidence=IMP] [GO:0040010 "positive regulation of
            growth rate" evidence=IMP] [GO:0010171 "body morphogenesis"
            evidence=IMP] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
            development" evidence=IMP] [GO:0006915 "apoptotic process"
            evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0006915
            GO:GO:0002119 GO:GO:0010171 GO:GO:0003723 GO:GO:0040035
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 KO:K14777
            OMA:IFIPSKF EMBL:Z29115 PIR:S40731 RefSeq:NP_499069.1
            ProteinModelPortal:P34580 SMR:P34580 STRING:P34580 PaxDb:P34580
            EnsemblMetazoa:T26G10.1 GeneID:176321 KEGG:cel:CELE_T26G10.1
            UCSC:T26G10.1 CTD:176321 WormBase:T26G10.1 InParanoid:P34580
            NextBio:892086 Uniprot:P34580
        Length = 489

 Score = 294 (108.6 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 69/188 (36%), Positives = 105/188 (55%)

Query:     2 LFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITV 61
             LFSATM   V KL R  L +P  + +      K  + +K + I      K T L  L+  
Sbjct:   223 LFSATMTKKVSKLERASLRDPARVSVSSRY--KTVDNLKQHYIFVPNKYKETYLVYLLNE 280

Query:    62 YAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVA 120
             +A G   IVF  T     ++++ L  + + +  LHG +SQ +R  +LN F+     +LV 
Sbjct:   281 HA-GNSAIVFCATCATTMQIAVMLRQLGMQAVPLHGQMSQEKRLGSLNKFKSKAREILVC 339

Query:   121 TDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 180
             TDVAARGLDIP+VD++I+Y++P+  + +VHR GRT RAG+ G AI + T       + +E
Sbjct:   340 TDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGIAITVVTQYDVEAYQKIE 399

Query:   181 RDVGCKFE 188
              ++G K +
Sbjct:   400 ANLGKKLD 407


>UNIPROTKB|F1S0I6 [details] [associations]
            symbol:DDX43 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
            InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
            SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
            GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 OMA:VLDITHV EMBL:CU468562
            EMBL:AEMK01095428 EMBL:AEMK01188208 EMBL:FP312832
            Ensembl:ENSSSCT00000004740 Uniprot:F1S0I6
        Length = 650

 Score = 298 (110.0 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 76/209 (36%), Positives = 114/209 (54%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             ++ SAT P  V++L++ YL  P+ I  VG  D      +K   I TT   KR+ +   I 
Sbjct:   426 VMTSATWPYAVRRLAQSYLKEPM-IVYVGTLDLVAVSTVKQNIIVTTEDEKRSHIQTFIE 484

Query:    61 VYAKGGKTIVFTQTKRDADEVSLAL-TSIIASEALHGDISQHQRERTLNGFRQGKFTVLV 119
               +   K I+F   K  AD +S  L    I+ E+LHG+  Q  RER L  F+ GK  +L+
Sbjct:   485 SMSPKDKVIIFVSRKAVADHLSSDLGIRHISVESLHGNREQGDRERALKNFKTGKVRILI 544

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATD+A+RGLD+ +V  + +Y+ P + E +VHR GRTGRAG+ G +I + T S  +    L
Sbjct:   545 ATDLASRGLDVHDVTHVYNYDFPRNIEEYVHRVGRTGRAGRTGVSITLITRSDWKIAGEL 604

Query:   180 ERDVGCKFEFVSPPVVEDVLESSAEQVVA 208
                +    E  +  + ED++E  AE+  A
Sbjct:   605 IHIL----ERANQSIPEDLVEM-AERYKA 628


>FB|FBgn0037573 [details] [associations]
            symbol:eIF4AIII "eIF4AIII" species:7227 "Drosophila
            melanogaster" [GO:0016281 "eukaryotic translation initiation factor
            4F complex" evidence=ISS] [GO:0003743 "translation initiation
            factor activity" evidence=ISS] [GO:0006413 "translational
            initiation" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0045495 "pole plasm" evidence=IDA] [GO:0045451 "pole plasm
            oskar mRNA localization" evidence=IGI] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=IC] [GO:0006974 "response to
            DNA damage stimulus" evidence=IMP] [GO:0008380 "RNA splicing"
            evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0016281
            GO:GO:0006974 GO:GO:0003743 GO:GO:0071011 GO:GO:0000398
            GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 GO:GO:0045451 GO:GO:0045495 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 ChiTaRS:EIF4A3
            EMBL:AY089635 ProteinModelPortal:Q8SXH3 SMR:Q8SXH3 IntAct:Q8SXH3
            STRING:Q8SXH3 PaxDb:Q8SXH3 PRIDE:Q8SXH3 FlyBase:FBgn0037573
            InParanoid:Q8SXH3 OrthoDB:EOG4XWDD6 Bgee:Q8SXH3 Uniprot:Q8SXH3
        Length = 399

 Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
 Identities = 67/201 (33%), Positives = 114/201 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SAT+P  + +++ K++ +P+ I LV  +DE   EGIK + ++      K   L DL 
Sbjct:   203 VLISATLPHEILEMTSKFMTDPIRI-LV-KRDELTLEGIKQFFVAVEREEWKFDTLCDLY 260

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  TKR  D ++  +        ++HGD+ Q +R+  +  FR G+  VL
Sbjct:   261 DTLTIT-QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDEIMKEFRAGQSRVL 319

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             + TDV ARG+D+  V L+I+Y+LPN+ E ++HR GR+GR G++G AI    S   R +R 
Sbjct:   320 ITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRD 379

Query:   179 LERDVGCKFEFVSPPVVEDVL 199
             +E+    + + + P  V D++
Sbjct:   380 IEQYYSTQIDEM-PVNVADLI 399


>UNIPROTKB|Q8EBV7 [details] [associations]
            symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
            KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
            Uniprot:Q8EBV7
        Length = 409

 Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
 Identities = 65/181 (35%), Positives = 104/181 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSAT+   +   S+  L +P  I++            ++YAI +    K   +S L+ 
Sbjct:   184 LLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRVYAIDSDR--KTEFVSHLVR 241

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                   + ++F++TK+  D+++  L  + +A+++ HGD+SQ  RE+ L  F+QG   VLV
Sbjct:   242 S-KNWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQVLV 300

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLDI  +  +I++ELP   E ++HR GRTGRAG  G AI +F+      +  +
Sbjct:   301 ATDVAARGLDIAELQYVINFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQEDALLLEEV 360

Query:   180 E 180
             E
Sbjct:   361 E 361


>TIGR_CMR|SO_3388 [details] [associations]
            symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
            KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
            Uniprot:Q8EBV7
        Length = 409

 Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
 Identities = 65/181 (35%), Positives = 104/181 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSAT+   +   S+  L +P  I++            ++YAI +    K   +S L+ 
Sbjct:   184 LLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRVYAIDSDR--KTEFVSHLVR 241

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                   + ++F++TK+  D+++  L  + +A+++ HGD+SQ  RE+ L  F+QG   VLV
Sbjct:   242 S-KNWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQVLV 300

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLDI  +  +I++ELP   E ++HR GRTGRAG  G AI +F+      +  +
Sbjct:   301 ATDVAARGLDIAELQYVINFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQEDALLLEEV 360

Query:   180 E 180
             E
Sbjct:   361 E 361


>UNIPROTKB|Q8ECL2 [details] [associations]
            symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
            GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
            Uniprot:Q8ECL2
        Length = 427

 Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
 Identities = 59/173 (34%), Positives = 102/173 (58%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSAT P  V+ L+ K L  PL   L   Q+  + + +    I+     K  +L+ LI 
Sbjct:   194 LLFSATFPEEVRALTTKLLHQPLEYHLQSEQESTIEQRV----ITVNREQKTALLAHLIK 249

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
              + +  + ++F   K   + ++  L+   I++E  HGD +Q  R R L+GF+ G+ +VL+
Sbjct:   250 QH-QWSQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVLDGFKNGEISVLI 308

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQ 172
             ATD+AARG+DI  + ++I+++LP  P  ++HR GR+GRAG+ G A+ + +  +
Sbjct:   309 ATDIAARGIDIDKLPVVINFDLPRSPADYMHRIGRSGRAGEAGLAVTLISHEE 361


>TIGR_CMR|SO_3125 [details] [associations]
            symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
            GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
            Uniprot:Q8ECL2
        Length = 427

 Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
 Identities = 59/173 (34%), Positives = 102/173 (58%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSAT P  V+ L+ K L  PL   L   Q+  + + +    I+     K  +L+ LI 
Sbjct:   194 LLFSATFPEEVRALTTKLLHQPLEYHLQSEQESTIEQRV----ITVNREQKTALLAHLIK 249

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
              + +  + ++F   K   + ++  L+   I++E  HGD +Q  R R L+GF+ G+ +VL+
Sbjct:   250 QH-QWSQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVLDGFKNGEISVLI 308

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQ 172
             ATD+AARG+DI  + ++I+++LP  P  ++HR GR+GRAG+ G A+ + +  +
Sbjct:   309 ATDIAARGIDIDKLPVVINFDLPRSPADYMHRIGRSGRAGEAGLAVTLISHEE 361


>TAIR|locus:2020078 [details] [associations]
            symbol:EIF4A-2 "eif4a-2" species:3702 "Arabidopsis
            thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003743 "translation initiation factor activity" evidence=ISS]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
            [GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005774
            "vacuolar membrane" evidence=IDA] [GO:0005886 "plasma membrane"
            evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
            "plasmodesma" evidence=IDA] [GO:0005794 "Golgi apparatus"
            evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
            [GO:0006096 "glycolysis" evidence=RCA] [GO:0009651 "response to
            salt stress" evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0009506
            GO:GO:0005524 GO:GO:0005774 GO:GO:0046686 EMBL:AC005287
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 KO:K03257 EMBL:X65053
            EMBL:AF386923 EMBL:AF428462 EMBL:BT008504 EMBL:AK226344
            EMBL:AY087965 IPI:IPI00522023 PIR:JC1453 RefSeq:NP_175829.1
            UniGene:At.195 ProteinModelPortal:P41377 SMR:P41377 STRING:P41377
            PaxDb:P41377 PRIDE:P41377 ProMEX:P41377 EnsemblPlants:AT1G54270.1
            GeneID:841868 KEGG:ath:AT1G54270 GeneFarm:936 TAIR:At1g54270
            InParanoid:P41377 OMA:QVVWEEN PhylomeDB:P41377
            ProtClustDB:CLSN2679594 Genevestigator:P41377 GermOnline:AT1G54270
            Uniprot:P41377
        Length = 412

 Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 69/200 (34%), Positives = 113/200 (56%)

Query:     2 LFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLIT 60
             +FSATMP    +++RK++  P+ I LV  +DE   EGIK + ++      K   L DL  
Sbjct:   217 VFSATMPPEALEITRKFMSKPVRI-LV-KRDELTLEGIKQFYVNVEKEDWKLETLCDLYE 274

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSIIAS-EALHGDISQHQRERTLNGFRQGKFTVLV 119
               A   ++++F  T+R  D ++  + S   +  A HGD+ Q+ R+  +  FR G   VL+
Sbjct:   275 TLAIT-QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
              TD+ ARG+D+  V L+I+++LP  PE ++HR GR+GR G++G AI   T   +R +  +
Sbjct:   334 TTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDI 393

Query:   180 ERDVGCKFEFVSPPVVEDVL 199
             ++      E + P  V D+L
Sbjct:   394 QKFYNVVVEEL-PSNVADLL 412


>WB|WBGene00018007 [details] [associations]
            symbol:F33D11.10 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0009790 "embryo development"
            evidence=IMP] [GO:0001703 "gastrulation with mouth forming first"
            evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051301
            "cell division" evidence=IMP] [GO:0000910 "cytokinesis"
            evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0018996 "molting
            cycle, collagen and cuticulin-based cuticle" evidence=IMP]
            [GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
            [GO:0040010 "positive regulation of growth rate" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
            GO:GO:0040010 GO:GO:0002119 GO:GO:0018996 GO:GO:0003676
            GO:GO:0000910 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            GeneTree:ENSGT00530000062880 GO:GO:0001703 KO:K13025 OMA:IFGKQPF
            EMBL:FO080753 PIR:T32773 RefSeq:NP_491703.1
            ProteinModelPortal:O44781 SMR:O44781 DIP:DIP-27243N IntAct:O44781
            MINT:MINT-1047941 STRING:O44781 PaxDb:O44781
            EnsemblMetazoa:F33D11.10.1 EnsemblMetazoa:F33D11.10.2 GeneID:172258
            KEGG:cel:CELE_F33D11.10 UCSC:F33D11.10.1 CTD:172258
            WormBase:F33D11.10 InParanoid:O44781 NextBio:874709 Uniprot:O44781
        Length = 399

 Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 66/201 (32%), Positives = 113/201 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SAT+P  + +++ K++ +P+ I LV  +DE   EGIK + ++      K   L DL 
Sbjct:   203 VLLSATLPHEILEMTSKFMTDPIRI-LV-KRDELTLEGIKQFFVAVDREEWKFDTLIDLY 260

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  T+R  D ++  +        ++HGD+ Q  R+  +  FR G   VL
Sbjct:   261 DTLTIT-QAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVL 319

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             ++TDV ARGLD+P V L+I+Y+LPN+ E ++HR GR+GR G++G AI        R +R 
Sbjct:   320 ISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILRD 379

Query:   179 LERDVGCKFEFVSPPVVEDVL 199
             +E+    + + + P  + D++
Sbjct:   380 IEQYYSTQIDEM-PMNIADII 399


>WB|WBGene00022029 [details] [associations]
            symbol:Y65B4A.6 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040007
            "growth" evidence=IMP] [GO:0002119 "nematode larval development"
            evidence=IMP] [GO:0018996 "molting cycle, collagen and
            cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
            evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
            "hermaphrodite genitalia development" evidence=IMP] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0042127 "regulation of cell proliferation" evidence=IMP]
            [GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0007281 "germ
            cell development" evidence=IMP] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0009792 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
            GO:GO:0018996 GO:GO:0040011 GO:GO:0003676 GO:GO:0042127
            GO:GO:0040035 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT EMBL:FO081482
            RefSeq:NP_490761.2 ProteinModelPortal:Q9BL61 SMR:Q9BL61
            STRING:Q9BL61 PaxDb:Q9BL61 EnsemblMetazoa:Y65B4A.6 GeneID:190485
            KEGG:cel:CELE_Y65B4A.6 UCSC:Y65B4A.6 CTD:190485 WormBase:Y65B4A.6
            InParanoid:Q9BL61 NextBio:945920 Uniprot:Q9BL61
        Length = 399

 Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 66/201 (32%), Positives = 113/201 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SAT+P  + +++ K++ +P+ I LV  +DE   EGIK + ++      K   L DL 
Sbjct:   203 VLLSATLPHEILEMTSKFMTDPIRI-LV-KRDELTLEGIKQFFVAVDREEWKFDTLIDLY 260

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  T+R  D ++  +        ++HGD+ Q  R+  +  FR G   VL
Sbjct:   261 DTLTIT-QAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVL 319

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             ++TDV ARGLD+P V L+I+Y+LPN+ E ++HR GR+GR G++G AI        R +R 
Sbjct:   320 ISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILRD 379

Query:   179 LERDVGCKFEFVSPPVVEDVL 199
             +E+    + + + P  + D++
Sbjct:   380 IEQYYSTQIDEM-PMNIADII 399


>ZFIN|ZDB-GENE-040120-6 [details] [associations]
            symbol:eif4a1b "eukaryotic translation initiation
            factor 4A, isoform 1B" species:7955 "Danio rerio" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0006413 "translational initiation" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040120-6 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 HOVERGEN:HBG107989 OrthoDB:EOG4640C1 EMBL:BC153507
            IPI:IPI00509685 UniGene:Dr.104803 ProteinModelPortal:A8E590
            SMR:A8E590 STRING:A8E590 ArrayExpress:A8E590 Uniprot:A8E590
        Length = 429

 Score = 288 (106.4 bits), Expect = 2.5e-25, P = 2.5e-25
 Identities = 66/182 (36%), Positives = 104/182 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SATMP+ V  ++ K++  P+ I LV  ++E   EGI+ + I+      K   L DL 
Sbjct:   233 VLLSATMPAEVLDVTTKFMREPVRI-LV-KKEELTLEGIRQFYINVEKEEWKLDTLCDLY 290

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  T+R  D ++  + +      ALHGD+ Q  R+  +  FR G   VL
Sbjct:   291 ETLTIT-QAVIFINTRRKVDWLTEKMHARDFTVSALHGDMDQKDRDLIMREFRSGSSRVL 349

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             + TD+ ARG+D+  V L+I+Y+LP + E ++HR GR GR G++G AI M T   +RT+R 
Sbjct:   350 ITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEDDKRTLRD 409

Query:   179 LE 180
             +E
Sbjct:   410 IE 411


>CGD|CAL0005460 [details] [associations]
            symbol:DBP3 species:5476 "Candida albicans" [GO:0005730
            "nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
            precursor" evidence=IEA] [GO:0000464 "endonucleolytic cleavage in
            ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript
            (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0008186
            "RNA-dependent ATPase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0005460
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 EMBL:AACQ01000001
            EMBL:AACQ01000002 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 RefSeq:XP_723365.1 RefSeq:XP_723554.1
            ProteinModelPortal:Q5APT8 STRING:Q5APT8 GeneID:3634868
            GeneID:3635070 KEGG:cal:CaO19.12334 KEGG:cal:CaO19.4870 KO:K14811
            Uniprot:Q5APT8
        Length = 564

 Score = 294 (108.6 bits), Expect = 2.6e-25, P = 2.6e-25
 Identities = 76/237 (32%), Positives = 129/237 (54%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAIST-TATSKRTILSDLI 59
             ++F+AT P  V++L+  ++++P+ +  VG++DE  A       +       K   L  L+
Sbjct:   332 LMFTATWPKEVRELANNFMNSPVKVT-VGDRDELSANKRITQVVEVINKFDKEKKLIQLL 390

Query:    60 TVY----AKGGKTIVFTQTKRDADEVSLALT-SIIASEALHGDISQHQRERTLNGFRQGK 114
               Y    +   K ++F   K++A  +   L  +  +  A+HGD+SQ QR   L+ F+ G+
Sbjct:   391 RKYNANESSDNKILIFALYKKEASRIENFLKRNRFSVAAIHGDLSQQQRTAALSAFKSGQ 450

Query:   115 FTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRR 174
               +L+ATDVAARGLDIPNV ++I+   P   E +VHR GRTGRAG +GTA  +FT  ++ 
Sbjct:   451 SNLLLATDVAARGLDIPNVKVVINLTFPLTIEDYVHRIGRTGRAGAKGTAHTLFTEDEKH 510

Query:   175 TVRSLERDVGCKF-EFVSPPVVEDVLE--SSAEQVVATLNGVHPESVEFFTPTAQRL 228
                +L     C      + PV E++L+     ++   ++ G   + V+  T TA+++
Sbjct:   511 LSGAL-----CNILRGANQPVPEELLKFGGHTKKKAHSVYGAFYKDVDM-TKTAKKI 561


>POMBASE|SPBC17D1.06 [details] [associations]
            symbol:dbp3 "ATP-dependent RNA helicase Dbp3
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
            "ribosomal large subunit assembly" evidence=ISO] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
            [GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
            processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 PomBase:SPBC17D1.06 GO:GO:0005524
            GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S
            PIR:T39709 RefSeq:NP_596388.1 ProteinModelPortal:Q10202
            STRING:Q10202 PRIDE:Q10202 EnsemblFungi:SPBC17D1.06.1
            GeneID:2540213 KEGG:spo:SPBC17D1.06 OMA:DRILVFC NextBio:20801345
            Uniprot:Q10202
        Length = 578

 Score = 294 (108.6 bits), Expect = 2.8e-25, P = 2.8e-25
 Identities = 71/178 (39%), Positives = 102/178 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGI-KLYAISTTATSKRTILSDLI 59
             + FSAT P  V+ L+  +L +P+ I  +G+ +   ++ I ++  I     SK  +L +L+
Sbjct:   349 VFFSATWPESVRALAATFLKDPVKIT-IGSDELAASQNITQIVEILDDPRSKERMLDNLL 407

Query:    60 TVY-AKGGKT---IVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKF 115
               + + GGK    ++F   K++A  V   L        +HGD+SQ  R + LN F+ GK 
Sbjct:   408 RKHLSSGGKDDKILIFVLYKKEAARVEGTLARKYNVVGIHGDMSQGARLQALNDFKSGKC 467

Query:   116 TVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQR 173
              VLVATDVAARGLDIP V L+I+   P   E +VHR GRTGRA  +GTAI  FT   +
Sbjct:   468 PVLVATDVAARGLDIPKVQLVINVTFPLTIEDYVHRIGRTGRANTKGTAITFFTPQDK 525


>UNIPROTKB|Q3SZ65 [details] [associations]
            symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
            species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 KO:K03257
            OrthoDB:EOG4640C1 EMBL:BC103106 IPI:IPI00711238
            RefSeq:NP_001029216.1 UniGene:Bt.13925 ProteinModelPortal:Q3SZ65
            SMR:Q3SZ65 STRING:Q3SZ65 PRIDE:Q3SZ65 Ensembl:ENSBTAT00000019596
            GeneID:286819 KEGG:bta:286819 CTD:1974 InParanoid:Q3SZ65
            OMA:TENDARQ NextBio:20806473 ArrayExpress:Q3SZ65 Uniprot:Q3SZ65
        Length = 407

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 65/182 (35%), Positives = 106/182 (58%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SATMP+ V ++++K++ +P+ I LV  ++E   EGIK + I+      K   L DL 
Sbjct:   211 VLLSATMPTDVLEVTKKFMRDPIRI-LV-KKEELTLEGIKQFYINVEREEWKLDTLCDLY 268

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  T+R  D ++  + +      ALHGD+ Q +R+  +  FR G   VL
Sbjct:   269 ETLTIT-QAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVL 327

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             + TD+ ARG+D+  V L+I+Y+LP + E ++HR GR GR G++G AI   T   +R +R 
Sbjct:   328 ITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRD 387

Query:   179 LE 180
             +E
Sbjct:   388 IE 389


>UNIPROTKB|E2R3J1 [details] [associations]
            symbol:EIF4A2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
            EMBL:AAEX03017297 RefSeq:XP_860499.2 ProteinModelPortal:E2R3J1
            SMR:E2R3J1 PRIDE:E2R3J1 Ensembl:ENSCAFT00000021683 GeneID:488118
            KEGG:cfa:488118 NextBio:20861546 Uniprot:E2R3J1
        Length = 407

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 65/182 (35%), Positives = 106/182 (58%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SATMP+ V ++++K++ +P+ I LV  ++E   EGIK + I+      K   L DL 
Sbjct:   211 VLLSATMPTDVLEVTKKFMRDPIRI-LV-KKEELTLEGIKQFYINVEREEWKLDTLCDLY 268

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  T+R  D ++  + +      ALHGD+ Q +R+  +  FR G   VL
Sbjct:   269 ETLTIT-QAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVL 327

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             + TD+ ARG+D+  V L+I+Y+LP + E ++HR GR GR G++G AI   T   +R +R 
Sbjct:   328 ITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRD 387

Query:   179 LE 180
             +E
Sbjct:   388 IE 389


>UNIPROTKB|Q14240 [details] [associations]
            symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003743 "translation initiation factor
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0019048 "virus-host interaction" evidence=IEA] [GO:0004386
            "helicase activity" evidence=TAS] [GO:0006446 "regulation of
            translational initiation" evidence=TAS] [GO:0016281 "eukaryotic
            translation initiation factor 4F complex" evidence=TAS] [GO:0000288
            "nuclear-transcribed mRNA catabolic process,
            deadenylation-dependent decay" evidence=TAS] [GO:0000289
            "nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
            [GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
            evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
            [GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
            metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
            process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
            pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
            process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
            Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_6900
            GO:GO:0019048 GO:GO:0006446 GO:GO:0016281 EMBL:CH471052
            GO:GO:0019221 GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 HOVERGEN:HBG107989 Reactome:REACT_1762 KO:K03257
            CTD:1974 OMA:TENDARQ EMBL:D30655 EMBL:BT009860 EMBL:AC112907
            EMBL:BC012547 EMBL:BC013708 EMBL:BC015842 EMBL:BC048105
            IPI:IPI00328328 IPI:IPI00409717 RefSeq:NP_001958.2
            UniGene:Hs.518475 UniGene:Hs.599481 PDB:3BOR PDBsum:3BOR
            ProteinModelPortal:Q14240 SMR:Q14240 IntAct:Q14240 MINT:MINT-202114
            STRING:Q14240 PhosphoSite:Q14240 DMDM:45645183 PaxDb:Q14240
            PRIDE:Q14240 DNASU:1974 Ensembl:ENST00000323963
            Ensembl:ENST00000440191 GeneID:1974 KEGG:hsa:1974 UCSC:uc003fqs.3
            UCSC:uc003fqu.3 GeneCards:GC03P186539 H-InvDB:HIX0003899
            HGNC:HGNC:3284 HPA:CAB011690 MIM:601102 neXtProt:NX_Q14240
            PharmGKB:PA27712 InParanoid:Q14240 PhylomeDB:Q14240 ChiTaRS:EIF4A2
            EvolutionaryTrace:Q14240 GenomeRNAi:1974 NextBio:7991
            PMAP-CutDB:Q14240 ArrayExpress:Q14240 Bgee:Q14240 CleanEx:HS_EIF4A2
            Genevestigator:Q14240 GermOnline:ENSG00000156976 Uniprot:Q14240
        Length = 407

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 65/182 (35%), Positives = 106/182 (58%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SATMP+ V ++++K++ +P+ I LV  ++E   EGIK + I+      K   L DL 
Sbjct:   211 VLLSATMPTDVLEVTKKFMRDPIRI-LV-KKEELTLEGIKQFYINVEREEWKLDTLCDLY 268

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  T+R  D ++  + +      ALHGD+ Q +R+  +  FR G   VL
Sbjct:   269 ETLTIT-QAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVL 327

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             + TD+ ARG+D+  V L+I+Y+LP + E ++HR GR GR G++G AI   T   +R +R 
Sbjct:   328 ITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRD 387

Query:   179 LE 180
             +E
Sbjct:   388 IE 389


>UNIPROTKB|Q9NZE6 [details] [associations]
            symbol:EIF4A2 "BM-010" species:9606 "Homo sapiens"
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CH471052 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
            HOVERGEN:HBG107989 HSSP:P10081 EMBL:AC112907 UniGene:Hs.518475
            UniGene:Hs.599481 HGNC:HGNC:3284 ChiTaRS:EIF4A2 EMBL:AF208852
            IPI:IPI00030296 SMR:Q9NZE6 STRING:Q9NZE6 Ensembl:ENST00000356531
            UCSC:uc003fqv.3 Uniprot:Q9NZE6
        Length = 312

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 65/182 (35%), Positives = 106/182 (58%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SATMP+ V ++++K++ +P+ I LV  ++E   EGIK + I+      K   L DL 
Sbjct:   116 VLLSATMPTDVLEVTKKFMRDPIRI-LV-KKEELTLEGIKQFYINVEREEWKLDTLCDLY 173

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  T+R  D ++  + +      ALHGD+ Q +R+  +  FR G   VL
Sbjct:   174 ETLTIT-QAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVL 232

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             + TD+ ARG+D+  V L+I+Y+LP + E ++HR GR GR G++G AI   T   +R +R 
Sbjct:   233 ITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRD 292

Query:   179 LE 180
             +E
Sbjct:   293 IE 294


>UNIPROTKB|A6M930 [details] [associations]
            symbol:EIF4A2 "Eukaryotic translation initiation factor 4A
            isoform 2" species:9823 "Sus scrofa" [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003743 "translation initiation factor activity"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003743
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
            GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
            EMBL:CU633961 EMBL:DQ351285 RefSeq:NP_001093665.1 UniGene:Ssc.10843
            ProteinModelPortal:A6M930 SMR:A6M930 PRIDE:A6M930
            Ensembl:ENSSSCT00000012915 GeneID:100101928 KEGG:ssc:100101928
            Uniprot:A6M930
        Length = 407

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 65/182 (35%), Positives = 106/182 (58%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SATMP+ V ++++K++ +P+ I LV  ++E   EGIK + I+      K   L DL 
Sbjct:   211 VLLSATMPTDVLEVTKKFMRDPIRI-LV-KKEELTLEGIKQFYINVEREEWKLDTLCDLY 268

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  T+R  D ++  + +      ALHGD+ Q +R+  +  FR G   VL
Sbjct:   269 ETLTIT-QAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVL 327

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             + TD+ ARG+D+  V L+I+Y+LP + E ++HR GR GR G++G AI   T   +R +R 
Sbjct:   328 ITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRD 387

Query:   179 LE 180
             +E
Sbjct:   388 IE 389


>MGI|MGI:106906 [details] [associations]
            symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
            initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:106906 GO:GO:0005524
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
            GeneTree:ENSGT00530000062880 KO:K03257 OrthoDB:EOG4640C1 CTD:1974
            OMA:TENDARQ EMBL:X12507 EMBL:X14422 EMBL:X56953 EMBL:AK076509
            EMBL:U64706 IPI:IPI00400432 IPI:IPI00409918 PIR:S00985
            RefSeq:NP_038534.2 UniGene:Mm.260084 ProteinModelPortal:P10630
            SMR:P10630 IntAct:P10630 STRING:P10630 PhosphoSite:P10630
            PaxDb:P10630 PRIDE:P10630 Ensembl:ENSMUST00000023599
            Ensembl:ENSMUST00000115341 GeneID:13682 KEGG:mmu:13682
            NextBio:284442 Bgee:P10630 CleanEx:MM_EIF4A2 Genevestigator:P10630
            GermOnline:ENSMUSG00000022884 Uniprot:P10630
        Length = 407

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 65/182 (35%), Positives = 106/182 (58%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SATMP+ V ++++K++ +P+ I LV  ++E   EGIK + I+      K   L DL 
Sbjct:   211 VLLSATMPTDVLEVTKKFMRDPIRI-LV-KKEELTLEGIKQFYINVEREEWKLDTLCDLY 268

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  T+R  D ++  + +      ALHGD+ Q +R+  +  FR G   VL
Sbjct:   269 ETLTIT-QAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVL 327

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             + TD+ ARG+D+  V L+I+Y+LP + E ++HR GR GR G++G AI   T   +R +R 
Sbjct:   328 ITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRD 387

Query:   179 LE 180
             +E
Sbjct:   388 IE 389


>POMBASE|SPAC1006.07 [details] [associations]
            symbol:SPAC1006.07 "translation initiation factor eIF4A
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002183
            "cytoplasmic translational initiation" evidence=NAS] [GO:0003743
            "translation initiation factor activity" evidence=ISO] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
            "ATP binding" evidence=IC] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0006413 "translational initiation" evidence=ISO] [GO:0016281
            "eukaryotic translation initiation factor 4F complex" evidence=ISO]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 PomBase:SPAC1006.07 GO:GO:0005829 GO:GO:0005524
            EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016281 GO:GO:0003743
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0002183 KO:K03257 OrthoDB:EOG4PG98F
            EMBL:X80796 EMBL:L40627 PIR:S71745 RefSeq:NP_594854.1
            ProteinModelPortal:P47943 SMR:P47943 STRING:P47943 PRIDE:P47943
            EnsemblFungi:SPAC1006.07.1 GeneID:2542948 KEGG:spo:SPAC1006.07
            OMA:PILEMED NextBio:20803983 Uniprot:P47943
        Length = 392

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 69/202 (34%), Positives = 115/202 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SATMP  V +++ K++ +P+ I LV  +DE   EGIK + ++      K   L DL 
Sbjct:   196 VLLSATMPQDVLEVTTKFMRDPIRI-LV-KKDELTLEGIKQFYVAVEKEEWKLDTLCDLY 253

Query:    60 -TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
              TV     + ++F  T+R  D ++  LT       ++HGD+ Q QR+  ++ FR G   +
Sbjct:   254 ETVTVT--QAVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFRTGSSRI 311

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             L+ TD+ ARG+D+  V L+I+Y+LP + E ++HR GR GR G++G +I   T+   R +R
Sbjct:   312 LITTDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVSINFVTNDDVRMMR 371

Query:   178 SLERDVGCKFEFVSPPVVEDVL 199
              +E+      E + P  + D++
Sbjct:   372 EIEQFYNTHIEEM-PMNIADLI 392


>RGD|1309225 [details] [associations]
            symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
            species:10116 "Rattus norvegicus" [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:1309225 GO:GO:0005524
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 HSSP:P60842
            KO:K03257 OrthoDB:EOG4640C1 CTD:1974 EMBL:BC085859 IPI:IPI00193595
            RefSeq:NP_001008336.1 UniGene:Rn.143972 ProteinModelPortal:Q5RKI1
            SMR:Q5RKI1 STRING:Q5RKI1 PhosphoSite:Q5RKI1
            World-2DPAGE:0004:Q5RKI1 PRIDE:Q5RKI1 GeneID:303831 KEGG:rno:303831
            UCSC:RGD:1309225 InParanoid:Q5RKI1 NextBio:652169
            ArrayExpress:Q5RKI1 Genevestigator:Q5RKI1
            GermOnline:ENSRNOG00000001815 Uniprot:Q5RKI1
        Length = 407

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 65/182 (35%), Positives = 106/182 (58%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SATMP+ V ++++K++ +P+ I LV  ++E   EGIK + I+      K   L DL 
Sbjct:   211 VLLSATMPTDVLEVTKKFMRDPIRI-LV-KKEELTLEGIKQFYINVEREEWKLDTLCDLY 268

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  T+R  D ++  + +      ALHGD+ Q +R+  +  FR G   VL
Sbjct:   269 ETLTIT-QAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVL 327

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             + TD+ ARG+D+  V L+I+Y+LP + E ++HR GR GR G++G AI   T   +R +R 
Sbjct:   328 ITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRD 387

Query:   179 LE 180
             +E
Sbjct:   388 IE 389


>UNIPROTKB|F1LP27 [details] [associations]
            symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            IPI:IPI00949972 Ensembl:ENSRNOT00000066369 ArrayExpress:F1LP27
            Uniprot:F1LP27
        Length = 312

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 65/182 (35%), Positives = 106/182 (58%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SATMP+ V ++++K++ +P+ I LV  ++E   EGIK + I+      K   L DL 
Sbjct:   116 VLLSATMPTDVLEVTKKFMRDPIRI-LV-KKEELTLEGIKQFYINVEREEWKLDTLCDLY 173

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  T+R  D ++  + +      ALHGD+ Q +R+  +  FR G   VL
Sbjct:   174 ETLTIT-QAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVL 232

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             + TD+ ARG+D+  V L+I+Y+LP + E ++HR GR GR G++G AI   T   +R +R 
Sbjct:   233 ITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRD 292

Query:   179 LE 180
             +E
Sbjct:   293 IE 294


>UNIPROTKB|F8WFX2 [details] [associations]
            symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
            OMA:TENDARQ IPI:IPI00193595 ProteinModelPortal:F8WFX2 PRIDE:F8WFX2
            Ensembl:ENSRNOT00000002484 Uniprot:F8WFX2
        Length = 408

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 65/182 (35%), Positives = 106/182 (58%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SATMP+ V ++++K++ +P+ I LV  ++E   EGIK + I+      K   L DL 
Sbjct:   212 VLLSATMPTDVLEVTKKFMRDPIRI-LV-KKEELTLEGIKQFYINVEREEWKLDTLCDLY 269

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  T+R  D ++  + +      ALHGD+ Q +R+  +  FR G   VL
Sbjct:   270 ETLTIT-QAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVL 328

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             + TD+ ARG+D+  V L+I+Y+LP + E ++HR GR GR G++G AI   T   +R +R 
Sbjct:   329 ITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRD 388

Query:   179 LE 180
             +E
Sbjct:   389 IE 390


>GENEDB_PFALCIPARUM|PFE0925c [details] [associations]
            symbol:PFE0925c "snrnp protein, putative"
            species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
            evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AL844504 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
            HSSP:Q58083 HOGENOM:HOG000268796 RefSeq:XP_001351742.1
            ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
            GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
            ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
        Length = 1123

 Score = 299 (110.3 bits), Expect = 3.3e-25, P = 3.3e-25
 Identities = 70/169 (41%), Positives = 103/169 (60%)

Query:     2 LFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITV 61
             +FSATMP  V++LSRKYL  P  I +      K +   KL  +  T   K+  L +++ +
Sbjct:   908 MFSATMPPSVERLSRKYLRAPAYISIGDPGAGKRSIEQKLEFL--TEGKKKQKLQEILEM 965

Query:    62 YAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVA 120
             Y      IVF   K+ AD +S ++T +   + ALHG  +Q  RE+TL+ F+  +F +LVA
Sbjct:   966 YEP--PIIVFVNQKKVADIISKSITKMKYKAVALHGGKAQEIREQTLSAFKNAEFDILVA 1023

Query:   121 TDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 169
             TDVA RG+D+  V L+I++++P D E++ HR GRTGRAG +G AI   T
Sbjct:  1024 TDVAGRGIDVHGVKLVINFDMPKDIESYTHRIGRTGRAGMKGLAISFIT 1072


>UNIPROTKB|Q8I0W7 [details] [associations]
            symbol:PFE0925c "Snrnp protein, putative" species:36329
            "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast" evidence=RCA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL844504
            InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
            HOGENOM:HOG000268796 RefSeq:XP_001351742.1
            ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
            GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
            ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
        Length = 1123

 Score = 299 (110.3 bits), Expect = 3.3e-25, P = 3.3e-25
 Identities = 70/169 (41%), Positives = 103/169 (60%)

Query:     2 LFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITV 61
             +FSATMP  V++LSRKYL  P  I +      K +   KL  +  T   K+  L +++ +
Sbjct:   908 MFSATMPPSVERLSRKYLRAPAYISIGDPGAGKRSIEQKLEFL--TEGKKKQKLQEILEM 965

Query:    62 YAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVA 120
             Y      IVF   K+ AD +S ++T +   + ALHG  +Q  RE+TL+ F+  +F +LVA
Sbjct:   966 YEP--PIIVFVNQKKVADIISKSITKMKYKAVALHGGKAQEIREQTLSAFKNAEFDILVA 1023

Query:   121 TDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 169
             TDVA RG+D+  V L+I++++P D E++ HR GRTGRAG +G AI   T
Sbjct:  1024 TDVAGRGIDVHGVKLVINFDMPKDIESYTHRIGRTGRAGMKGLAISFIT 1072


>TIGR_CMR|SO_3783 [details] [associations]
            symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
            GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
            RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
            KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
            Uniprot:Q8EAV8
        Length = 535

 Score = 292 (107.8 bits), Expect = 3.5e-25, P = 3.5e-25
 Identities = 63/182 (34%), Positives = 109/182 (59%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             ++FSAT    +++L++  +++P+ I +        A  +K +      T K  +L  LI 
Sbjct:   182 LMFSATFSDEIRELAKGLVNHPVEISVTPRN--AAATTVKQWICPVDKTQKSALLIQLIK 239

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                   + +VF++TK  A+ ++ +L    I++ A+HG+ SQ  R + L  F+ G+  VLV
Sbjct:   240 -QENWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLV 298

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATD+AARGLDI  +  +++++LPN PE +VHR GRTGRAG  G A+ + +S + + ++ +
Sbjct:   299 ATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGATGQAVSLVSSEEIKLLKDI 358

Query:   180 ER 181
             ER
Sbjct:   359 ER 360


>SGD|S000001767 [details] [associations]
            symbol:TIF1 "Translation initiation factor eIF4A"
            species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
            initiation factor activity" evidence=IEA;IMP;IDA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0006413 "translational
            initiation" evidence=IEA;IMP;IDA] [GO:0006412 "translation"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IMP;IDA] [GO:0005840 "ribosome" evidence=TAS] [GO:0016281
            "eukaryotic translation initiation factor 4F complex"
            evidence=IGI;ISS] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000001767
            SGD:S000003674 GO:GO:0005524 GO:GO:0005737 EMBL:BK006943
            EMBL:BK006944 GO:GO:0003743 EMBL:X87371 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 KO:K03854
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
            OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
            EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
            RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
            PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
            PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
            SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
            STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
            EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
            KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
            EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
            GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
        Length = 395

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 64/190 (33%), Positives = 110/190 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SATMP+ V +++ K++ NP+ I LV  +DE   EGIK + ++      K   L+DL 
Sbjct:   198 VLLSATMPNDVLEVTTKFMRNPVRI-LV-KKDELTLEGIKQFYVNVEEEEYKYECLTDLY 255

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                +   + ++F  T+R  +E++  L +      A++ D+ Q +R+  +  FR G   +L
Sbjct:   256 DSISVT-QAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRIL 314

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             ++TD+ ARG+D+  V L+I+Y+LP + E ++HR GR GR G++G AI   T+     +R 
Sbjct:   315 ISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMRE 374

Query:   179 LERDVGCKFE 188
             LE+    + E
Sbjct:   375 LEKFYSTQIE 384


>SGD|S000003674 [details] [associations]
            symbol:TIF2 "Translation initiation factor eIF4A"
            species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
            initiation factor activity" evidence=IEA;ISS;IDA;TAS] [GO:0005886
            "plasma membrane" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IEA;ISS;IDA] [GO:0006446 "regulation of translational
            initiation" evidence=ISS] [GO:0005840 "ribosome" evidence=TAS]
            [GO:0016281 "eukaryotic translation initiation factor 4F complex"
            evidence=IGI;ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IMP] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] [GO:0006413 "translational initiation"
            evidence=IEA;TAS] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 SGD:S000001767 SGD:S000003674 GO:GO:0005524
            GO:GO:0005737 EMBL:BK006943 EMBL:BK006944 GO:GO:0003743 EMBL:X87371
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            KO:K03854 eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
            OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
            EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
            RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
            PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
            PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
            SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
            STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
            EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
            KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
            EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
            GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
        Length = 395

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 64/190 (33%), Positives = 110/190 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SATMP+ V +++ K++ NP+ I LV  +DE   EGIK + ++      K   L+DL 
Sbjct:   198 VLLSATMPNDVLEVTTKFMRNPVRI-LV-KKDELTLEGIKQFYVNVEEEEYKYECLTDLY 255

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                +   + ++F  T+R  +E++  L +      A++ D+ Q +R+  +  FR G   +L
Sbjct:   256 DSISVT-QAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRIL 314

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             ++TD+ ARG+D+  V L+I+Y+LP + E ++HR GR GR G++G AI   T+     +R 
Sbjct:   315 ISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMRE 374

Query:   179 LERDVGCKFE 188
             LE+    + E
Sbjct:   375 LEKFYSTQIE 384


>UNIPROTKB|F1NL04 [details] [associations]
            symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
            evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
            [GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
            of protein localization" evidence=IEA] [GO:0033391 "chromatoid
            body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
            GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
            EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
            Ensembl:ENSGALT00000038830 Uniprot:F1NL04
        Length = 542

 Score = 291 (107.5 bits), Expect = 4.7e-25, P = 4.7e-25
 Identities = 70/182 (38%), Positives = 106/182 (58%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             ++FSAT P  V++L+ ++L       ++GN     ++ ++   +     SKR  L +++ 
Sbjct:   357 LMFSATFPEEVQRLAGEFLKTDYIFLVIGNTCGACSD-VQQNILQVPRLSKRDKLIEILQ 415

Query:    61 VYAKGG-KTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
               + GG +T+VF  TK+ AD ++  L    + S ++HGD  Q +RE  L  FR GK  +L
Sbjct:   416 --STGGERTMVFVDTKKKADYLAAFLCQENLPSTSIHGDREQREREIALRDFRSGKCQIL 473

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTS-SQRRTVR 177
             VAT VA+RGLDI NV  +I+++LPN  E +VHR GRTGR G  G A+  F   S    V+
Sbjct:   474 VATSVASRGLDIENVQHVINFDLPNTIEDYVHRIGRTGRCGNTGKAVSFFDDQSDGHLVQ 533

Query:   178 SL 179
             SL
Sbjct:   534 SL 535


>DICTYBASE|DDB_G0280147 [details] [associations]
            symbol:ddx47 "DEAD/DEAH box helicase" species:44689
            "Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0280147 GO:GO:0005524
            GO:GO:0005730 GenomeReviews:CM000152_GR GO:GO:0003723
            EMBL:AAFI02000035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HSSP:Q5STU4 KO:K14777 OMA:IFIPSKF
            RefSeq:XP_641271.1 ProteinModelPortal:Q54VT4 SMR:Q54VT4
            EnsemblProtists:DDB0234204 GeneID:8622403 KEGG:ddi:DDB_G0280147
            Uniprot:Q54VT4
        Length = 546

 Score = 291 (107.5 bits), Expect = 4.9e-25, P = 4.9e-25
 Identities = 68/169 (40%), Positives = 106/169 (62%)

Query:     2 LFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITV 61
             LFSATM S V KL R  L NP+ +  V ++ + +   ++ Y +      K   L+ ++  
Sbjct:   298 LFSATMTSKVAKLQRASLVNPVKVQ-VASKYQTVDTLLQQY-LFVPFKYKDCYLAYILNE 355

Query:    62 YAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVA 120
              A G  TI+FT T   + ++++ L ++   +  ++GD+ Q +R  +LN F+QG  ++LVA
Sbjct:   356 LA-GNLTIIFTSTCASSTKIAMMLRNLGFGAIPINGDMDQGKRLASLNKFKQGTKSILVA 414

Query:   121 TDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 169
             TDVAARGLDIP+VDL+I+Y++P + + +VHR GRT RAG  G AI + T
Sbjct:   415 TDVAARGLDIPSVDLVINYDVPTNSKEYVHRVGRTARAGNSGRAITIVT 463


>UNIPROTKB|F1N991 [details] [associations]
            symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
            meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
            [GO:0032880 "regulation of protein localization" evidence=IEA]
            [GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
            "perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
            GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
            OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
            IPI:IPI00819436 ProteinModelPortal:F1N991
            Ensembl:ENSGALT00000023724 Uniprot:F1N991
        Length = 568

 Score = 291 (107.5 bits), Expect = 5.6e-25, P = 5.6e-25
 Identities = 70/182 (38%), Positives = 106/182 (58%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             ++FSAT P  V++L+ ++L       ++GN     ++ ++   +     SKR  L +++ 
Sbjct:   357 LMFSATFPEEVQRLAGEFLKTDYIFLVIGNTCGACSD-VQQNILQVPRLSKRDKLIEILQ 415

Query:    61 VYAKGG-KTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
               + GG +T+VF  TK+ AD ++  L    + S ++HGD  Q +RE  L  FR GK  +L
Sbjct:   416 --STGGERTMVFVDTKKKADYLAAFLCQENLPSTSIHGDREQREREIALRDFRSGKCQIL 473

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTS-SQRRTVR 177
             VAT VA+RGLDI NV  +I+++LPN  E +VHR GRTGR G  G A+  F   S    V+
Sbjct:   474 VATSVASRGLDIENVQHVINFDLPNTIEDYVHRIGRTGRCGNTGKAVSFFDDQSDGHLVQ 533

Query:   178 SL 179
             SL
Sbjct:   534 SL 535


>UNIPROTKB|Q8JFP1 [details] [associations]
            symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
            species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003743 "translation initiation factor
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 HSSP:P60842
            KO:K03257 OrthoDB:EOG4640C1 CTD:1974 OMA:TENDARQ EMBL:AF515726
            EMBL:AJ720280 IPI:IPI00588868 RefSeq:NP_989880.1 UniGene:Gga.4580
            ProteinModelPortal:Q8JFP1 SMR:Q8JFP1 STRING:Q8JFP1 PRIDE:Q8JFP1
            Ensembl:ENSGALT00000014135 Ensembl:ENSGALT00000039726 GeneID:395232
            KEGG:gga:395232 InParanoid:Q8JFP1 NextBio:20815321
            ArrayExpress:Q8JFP1 Uniprot:Q8JFP1
        Length = 407

 Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
 Identities = 65/182 (35%), Positives = 104/182 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SATMP  V ++++K++  P+ I LV  ++E   EGIK + I+      K   L DL 
Sbjct:   211 VLLSATMPMDVLEVTKKFMREPIRI-LV-KKEELTLEGIKQFYINVEREEWKLDTLCDLY 268

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  T+R  D ++  + +      ALHGD+ Q +R+  +  FR G   VL
Sbjct:   269 ETLTIT-QAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVL 327

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             + TD+ ARG+D+  V L+I+Y+LP + E ++HR GR GR G++G AI   T   +R +R 
Sbjct:   328 ITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRD 387

Query:   179 LE 180
             +E
Sbjct:   388 IE 389


>UNIPROTKB|I3LLD5 [details] [associations]
            symbol:I3LLD5 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00530000062880 Ensembl:ENSSSCT00000032168 OMA:SKRERIM
            Uniprot:I3LLD5
        Length = 401

 Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
 Identities = 68/201 (33%), Positives = 111/201 (55%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SATMPS V ++++K++ +P+ I L         EGI+ + I+      K   L DL 
Sbjct:   210 VLLSATMPSDVLEVTKKFMRDPIRIXLT-------LEGIRQFYINVEREEWKLDTLCDLY 262

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  T+R  D ++  + +      A+HGD+ Q +R+  +  FR G   VL
Sbjct:   263 ETLTIT-QAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVL 321

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             + TD+ ARG+D+  V L+I+Y+LP + E ++HR GR GR G++G AI M T   +RT+R 
Sbjct:   322 ITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRD 381

Query:   179 LERDVGCKFEFVSPPVVEDVL 199
             +E       E + P  V D++
Sbjct:   382 IETFYNTSIEEM-PLNVADLI 401


>TIGR_CMR|DET_0183 [details] [associations]
            symbol:DET_0183 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:243164 "Dehalococcoides ethenogenes 195"
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            [GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_180931.1 ProteinModelPortal:Q3ZA18
            STRING:Q3ZA18 GeneID:3230538 KEGG:det:DET0183 PATRIC:21607443
            OMA:NFAPAVM ProtClustDB:CLSK837629
            BioCyc:DETH243164:GJNF-183-MONOMER Uniprot:Q3ZA18
        Length = 560

 Score = 290 (107.1 bits), Expect = 6.8e-25, P = 6.8e-25
 Identities = 63/183 (34%), Positives = 108/183 (59%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLI- 59
             +LFSATMP  V+KL+ +   NP+ I  +G Q    +    +Y +      K  +L +++ 
Sbjct:   179 LLFSATMPPEVRKLTLETQTNPVTIQ-IGTQAPASSVSHSVYPVKNH--QKTPLLIEILK 235

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
             T   K    ++F +TK  A+ ++  ++     + +L G++SQ++R   + GFR+G F +L
Sbjct:   236 TTETKS--VLIFARTKYGAENLADEISRAGFTTASLQGNLSQNRRHAVMEGFRRGNFKIL 293

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             VATD+AARGLDI ++  +I+Y++P+ PE + HR GRTGR  + G A+ + T      VR 
Sbjct:   294 VATDIAARGLDIDHISHVINYDMPDTPEDYTHRIGRTGRFDRTGQALSLVTGRDGDMVRD 353

Query:   179 LER 181
             +++
Sbjct:   354 IQK 356


>UNIPROTKB|Q8EGU0 [details] [associations]
            symbol:SO_1501 "ATP-dependent RNA helicase DEAD box family"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
            OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
            GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
            ProtClustDB:CLSK906294 Uniprot:Q8EGU0
        Length = 456

 Score = 286 (105.7 bits), Expect = 7.4e-25, P = 7.4e-25
 Identities = 76/198 (38%), Positives = 106/198 (53%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             MLFSAT    VK+LS K L+ P  +++  N      E + +Y +      K  +LS+L+ 
Sbjct:   181 MLFSATYSDAVKQLSHKMLNQPQWVNVAENTTASTVEQL-VYRVDKRR--KAELLSELVG 237

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                   + +VF  TK  A+ +   LT   I++   HGD +Q  R R L+ F+ GK  VLV
Sbjct:   238 -RNNWRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKLRVLV 296

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLDI  + L+I+ ELP   E +VHR GRTGRAG  G AI   + +    +  +
Sbjct:   297 ATDVAARGLDIQALPLVINLELPFLAEDYVHRIGRTGRAGLSGRAISFVSPADDEMLAEI 356

Query:   180 ERDVGCKFEFVSPPVVED 197
             E  +G K      P  E+
Sbjct:   357 EALIGEKLPVTVQPGYEE 374


>TIGR_CMR|SO_1501 [details] [associations]
            symbol:SO_1501 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
            OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
            GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
            ProtClustDB:CLSK906294 Uniprot:Q8EGU0
        Length = 456

 Score = 286 (105.7 bits), Expect = 7.4e-25, P = 7.4e-25
 Identities = 76/198 (38%), Positives = 106/198 (53%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             MLFSAT    VK+LS K L+ P  +++  N      E + +Y +      K  +LS+L+ 
Sbjct:   181 MLFSATYSDAVKQLSHKMLNQPQWVNVAENTTASTVEQL-VYRVDKRR--KAELLSELVG 237

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                   + +VF  TK  A+ +   LT   I++   HGD +Q  R R L+ F+ GK  VLV
Sbjct:   238 -RNNWRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKLRVLV 296

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLDI  + L+I+ ELP   E +VHR GRTGRAG  G AI   + +    +  +
Sbjct:   297 ATDVAARGLDIQALPLVINLELPFLAEDYVHRIGRTGRAGLSGRAISFVSPADDEMLAEI 356

Query:   180 ERDVGCKFEFVSPPVVED 197
             E  +G K      P  E+
Sbjct:   357 EALIGEKLPVTVQPGYEE 374


>ASPGD|ASPL0000014018 [details] [associations]
            symbol:fal1 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003723 EMBL:BN001302 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            EMBL:AACD01000139 KO:K13025 RefSeq:XP_681285.1
            ProteinModelPortal:Q5AUL4 SMR:Q5AUL4 PRIDE:Q5AUL4
            EnsemblFungi:CADANIAT00004036 GeneID:2869287 KEGG:ani:AN8016.2
            OMA:EDWKFDT OrthoDB:EOG4HTD1W Uniprot:Q5AUL4
        Length = 399

 Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
 Identities = 68/201 (33%), Positives = 113/201 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             ++ SAT+P  V  ++ K++ +P+ + LV  +DE   EGIK Y I+      K   L DL 
Sbjct:   202 VVVSATLPYDVLDMTTKFMTDPVRV-LV-KRDELTLEGIKQYFIAVEKEEWKFDTLCDLY 259

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  T+R  D ++  +        ++HG++ Q +R+  +  FRQG   VL
Sbjct:   260 DTLTIT-QAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVL 318

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             ++TDV ARG+D+  V L+I+Y+LP + E ++HR GR+GR G++G AI   TS   R +R 
Sbjct:   319 ISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDVRILRD 378

Query:   179 LERDVGCKFEFVSPPVVEDVL 199
             +E     + + + P  V D+L
Sbjct:   379 IELYYSTQIDEM-PMNVADLL 398


>CGD|CAL0001638 [details] [associations]
            symbol:FAL1 species:5476 "Candida albicans" [GO:0005730
            "nucleolus" evidence=IEA] [GO:0097078 "FAl1-SGD1 complex"
            evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
            rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 CGD:CAL0001638 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            EMBL:AACQ01000041 EMBL:AACQ01000040 GO:GO:0006364 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ250879
            RefSeq:XP_718509.1 RefSeq:XP_718592.1 ProteinModelPortal:Q5A9Z6
            SMR:Q5A9Z6 GeneID:3639739 GeneID:3639839 KEGG:cal:CaO19.10024
            KEGG:cal:CaO19.2488 KO:K13025 Uniprot:Q5A9Z6
        Length = 399

 Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
 Identities = 69/204 (33%), Positives = 115/204 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             ++ SAT+P  V +++ K+  +P+ I LV  +DE    GIK Y +       K   L DL 
Sbjct:   203 VVVSATLPREVLEMTSKFTTDPVKI-LV-KRDEISLSGIKQYYVQCEREDWKFDTLCDLY 260

Query:    60 TVYAKGGKTIVFTQTKRD----ADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKF 115
                    + ++F  TK      AD++     +++A   +HGD+ Q +R+  +N FR+G  
Sbjct:   261 DNLTIT-QAVIFCNTKLKVNWLADQMKKQNFTVVA---MHGDMKQDERDSIMNDFRRGNS 316

Query:   116 TVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRT 175
              VL++TDV ARG+D+  V L+I+Y+LP D E ++HR GR+GR G++GTAI + T     T
Sbjct:   317 RVLISTDVWARGIDVQQVSLVINYDLPTDKENYIHRIGRSGRFGRKGTAINLITKDDVVT 376

Query:   176 VRSLERDVGCKFEFVSPPVVEDVL 199
             ++  E+    K + + P  + D++
Sbjct:   377 LKEFEKYYSTKIKEM-PMNINDIM 399


>FB|FBgn0035720 [details] [associations]
            symbol:CG10077 species:7227 "Drosophila melanogaster"
            [GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005875 "microtubule associated complex"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
            EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
            GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
            GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
            ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
            RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
            STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
            UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
        Length = 818

 Score = 293 (108.2 bits), Expect = 8.3e-25, P = 8.3e-25
 Identities = 66/183 (36%), Positives = 113/183 (61%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTI-LSDLI 59
             +++SAT P  V++L+ ++L+N + ++ +G+        I L  +     +++ + L  L+
Sbjct:   339 LMWSATWPKEVRQLAEEFLNNYIQVN-IGSLSLSANHNI-LQIVDVCDENEKLMKLIKLL 396

Query:    60 T-VYAKGG-KTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFT 116
             T + A+   KTI+F +TK+  DE++  ++     + A+HGD SQ +R+  L+ FR G+ +
Sbjct:   397 TDISAENETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHS 456

Query:   117 VLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTV 176
             +LVATDVAARGLD+ +V  +I+Y+ P++ E +VHR GRTGR+   GTA  +FT S     
Sbjct:   457 ILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANKA 516

Query:   177 RSL 179
               L
Sbjct:   517 NDL 519


>UNIPROTKB|G3MYF0 [details] [associations]
            symbol:LOC100300937 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 OMA:GLKSICI EMBL:DAAA02074437
            Ensembl:ENSBTAT00000065115 Uniprot:G3MYF0
        Length = 608

 Score = 290 (107.1 bits), Expect = 8.8e-25, P = 8.8e-25
 Identities = 69/206 (33%), Positives = 112/206 (54%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             ++ +A+ P   ++L++ YL  P+ I  VG  D      +K   I TT   KR+++ + + 
Sbjct:   383 VMTTASWPDSTRRLAQSYLKQPM-IVYVGTLDLVTVNTVKQNIIVTTEEEKRSLVKEFLQ 441

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHGDISQHQRERTLNGFRQGKFTVLV 119
               +   K IVF   K  AD++S  L+   I  ++LHGD  Q  R++ L  FR G+  +L+
Sbjct:   442 SLSPKDKVIVFVSRKLVADDLSSDLSIQGIPVQSLHGDREQSDRDQALEDFRTGRVKILI 501

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATD+AARGLD+ +V  + +Y  P + E +VHR GRTGRAGK G +I + T    +    L
Sbjct:   502 ATDLAARGLDVSDVTHVYNYNFPRNIEEYVHRVGRTGRAGKIGESITLVTQDDWKIADEL 561

Query:   180 ERDVGCKFEFVSPPVVEDVLESSAEQ 205
              + +    + V PP +  + +   +Q
Sbjct:   562 IKILQRANQIV-PPSLRSMADRFKKQ 586


>TAIR|locus:2088237 [details] [associations]
            symbol:EIF4A1 "eukaryotic translation initiation factor
            4A1" species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003743 "translation initiation factor
            activity" evidence=ISS] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
            [GO:0006413 "translational initiation" evidence=ISS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0046686
            "response to cadmium ion" evidence=IEP;RCA] [GO:0016020 "membrane"
            evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
            "plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
            [GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0006094
            "gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
            evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
            GO:GO:0005618 GO:GO:0046686 EMBL:CP002686 GO:GO:0005730
            GO:GO:0016020 GO:GO:0048046 GO:GO:0006413 GO:GO:0003743
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OMA:SKRERIM
            IPI:IPI00657454 RefSeq:NP_001030693.1 UniGene:At.23558
            UniGene:At.28184 ProteinModelPortal:F4JEL4 SMR:F4JEL4 PRIDE:F4JEL4
            EnsemblPlants:AT3G13920.2 GeneID:820605 KEGG:ath:AT3G13920
            Uniprot:F4JEL4
        Length = 415

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 64/175 (36%), Positives = 101/175 (57%)

Query:     2 LFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLIT 60
             +FSATMP    +++RK++  P+ I LV  +DE   EGIK + ++      K   L DL  
Sbjct:   217 VFSATMPPEALEITRKFMSKPVRI-LV-KRDELTLEGIKQFYVNVEKEEWKLETLCDLYE 274

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSIIAS-EALHGDISQHQRERTLNGFRQGKFTVLV 119
               A   ++++F  T+R  D ++  + S   +  A HGD+ Q+ R+  +  FR G   VL+
Sbjct:   275 TLAIT-QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRR 174
              TD+ ARG+D+  V L+I+++LP  PE ++HR GR+GR G++G AI   T    R
Sbjct:   334 TTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDER 388


>ZFIN|ZDB-GENE-040426-2802 [details] [associations]
            symbol:eif4a2 "eukaryotic translation initiation
            factor 4A, isoform 2" species:7955 "Danio rerio" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0006413
            "translational initiation" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            ZFIN:ZDB-GENE-040426-2802 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
            EMBL:CT027646 EMBL:CU929049 IPI:IPI00507769
            ProteinModelPortal:F1R166 Ensembl:ENSDART00000130781
            ArrayExpress:F1R166 Bgee:F1R166 Uniprot:F1R166
        Length = 411

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 65/182 (35%), Positives = 104/182 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SATMP+ V +++ K++  P+ I LV  ++E   EGIK + I+      K   L DL 
Sbjct:   215 VLLSATMPADVLEVTTKFMREPVRI-LV-KKEELTLEGIKQFYINVEREEWKLDTLCDLY 272

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  T+R  D ++  + +      ALHGD+ Q +R+  +  FR G   VL
Sbjct:   273 ETLTIT-QAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDIIMREFRSGSSRVL 331

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             + TD+ ARG+D+  V L+I+Y+LP + E ++HR GR GR G++G AI   T   +R +R 
Sbjct:   332 ITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRD 391

Query:   179 LE 180
             +E
Sbjct:   392 IE 393


>FB|FBgn0030631 [details] [associations]
            symbol:CG6227 species:7227 "Drosophila melanogaster"
            [GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=ISS] [GO:0003724 "RNA helicase
            activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
            evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000381
            "regulation of alternative mRNA splicing, via spliceosome"
            evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0000398
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
            HSSP:Q58083 GeneTree:ENSGT00610000086076 KO:K12811 OMA:RGRYKVL
            EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
            EMBL:FJ764855 EMBL:FJ764858 FlyBase:FBgn0030631 EMBL:BT016090
            RefSeq:NP_573020.2 UniGene:Dm.168 SMR:Q9VXW2 IntAct:Q9VXW2
            EnsemblMetazoa:FBtr0074011 GeneID:32464 KEGG:dme:Dmel_CG6227
            UCSC:CG6227-RA InParanoid:Q9VXW2 GenomeRNAi:32464 NextBio:778600
            Uniprot:Q9VXW2
        Length = 1224

 Score = 295 (108.9 bits), Expect = 1.0e-24, P = 1.0e-24
 Identities = 64/175 (36%), Positives = 103/175 (58%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             ++FSAT P  ++ L+R+ L  P+ + +VG +     E ++ + +     +K   L +L+ 
Sbjct:   695 VMFSATFPRQMEALARRILKKPIEV-IVGGRSVVCKE-VEQHVVILNDDAKFFKLLELLG 752

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
             +Y + G  IVF   + +AD +   L        +LHG I Q  R+ T+  F+ GK  +L+
Sbjct:   753 IYQEAGSIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLI 812

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRR 174
             AT VAARGLD+ ++ L+++Y++PN  E +VHR GRTGRAGK+G+A    T  Q R
Sbjct:   813 ATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQSR 867


>UNIPROTKB|F1NVJ6 [details] [associations]
            symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR004087
            InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322
            SMART:SM00490 GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00660000095174 OMA:VLDITHV
            EMBL:AADN02002507 EMBL:AADN02002508 IPI:IPI00594090
            Ensembl:ENSGALT00000025673 Uniprot:F1NVJ6
        Length = 642

 Score = 290 (107.1 bits), Expect = 1.0e-24, P = 1.0e-24
 Identities = 69/206 (33%), Positives = 112/206 (54%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             ++ SAT P  V++L++ YL NP+ I  VG  D      ++   I      K+  + + I 
Sbjct:   421 VMMSATWPDGVRRLAKSYLRNPM-IVYVGTLDLAAVNTVEQKVIVINEEEKKAFMENFID 479

Query:    61 VYAKGGKTIVFTQTKRDADEVSLAL-TSIIASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                   K I+F   K  AD+++  L    +  ++LHGD  Q  RE+ L+ F++GK  +LV
Sbjct:   480 SMKPKDKAIIFVGKKSTADDIASDLGVQGVPVQSLHGDREQCDREQALDDFKKGKVRILV 539

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATD+A+RGLD+ ++  + +++ P + E +VHR GRTGRAG+ G A+ + T    +    L
Sbjct:   540 ATDLASRGLDVHDITHVFNFDFPRNIEEYVHRVGRTGRAGRTGKAVTLITKKDWKAASEL 599

Query:   180 ERDVGCKFEFVSPPVVEDVLESSAEQ 205
               D+  +    +  VV D L S AE+
Sbjct:   600 I-DILQR----AKQVVPDELISMAER 620


>UNIPROTKB|E1C2R8 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
            development" evidence=IEA] [GO:0072358 "cardiovascular system
            development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
            OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
            Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
        Length = 496

 Score = 286 (105.7 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 65/199 (32%), Positives = 114/199 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGI-KLYAISTTATSKRTILSDLI 59
             +++SAT P  V++L+  +L + + I+ VGN +      I ++  +   +     ++  + 
Sbjct:   272 LMWSATWPKEVRQLAEDFLQDYVQIN-VGNLELSANHNILQIVDVCMESEKDHKLIQLME 330

Query:    60 TVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
              + A K  KTI+F +TKR  D+++  +      +  +HGD SQ +R+  LN FR GK  +
Sbjct:   331 EIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPI 390

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             L+ATDVA+RGLD+ +V  +I+Y+ PN  E +VHR GRT R+  +GTA   FT    +  R
Sbjct:   391 LIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAR 450

Query:   178 SLERDVGCKFEFVSPPVVE 196
              L + +    + ++P +++
Sbjct:   451 ELIKVLEEANQAINPKLMQ 469


>UNIPROTKB|E1BII7 [details] [associations]
            symbol:DDX43 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
            InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
            SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
            GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 EMBL:DAAA02025231 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 EMBL:DAAA02025227 EMBL:DAAA02025228
            EMBL:DAAA02025229 EMBL:DAAA02025230 IPI:IPI00712097
            Ensembl:ENSBTAT00000029077 OMA:ANQNIPE Uniprot:E1BII7
        Length = 647

 Score = 289 (106.8 bits), Expect = 1.3e-24, P = 1.3e-24
 Identities = 75/209 (35%), Positives = 113/209 (54%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             ++ SAT P  V++L++ YL  P+ I  VG  D      +    I TT   KR+ +   I 
Sbjct:   423 VMTSATWPYAVRRLAQSYLKEPM-IVYVGTLDLVAVSTVTQNIIVTTEDEKRSHIQAFID 481

Query:    61 VYAKGGKTIVFTQTKRDADEVSLAL-TSIIASEALHGDISQHQRERTLNGFRQGKFTVLV 119
               +   K I+F   K  AD +S  L    I+ E+LHG+  Q  RER L  F+ GK  +L+
Sbjct:   482 SMSPKDKVIIFVSRKAVADHLSSDLGIRRISVESLHGNREQSDRERALKSFKTGKVRILI 541

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATD+A+RGLD+ +V  + +Y+ P + E +VHR GRTGRAG+ G +I + T +  +    L
Sbjct:   542 ATDLASRGLDVHDVTHVYNYDFPRNIEEYVHRVGRTGRAGRTGVSITLITRNDWKIAGEL 601

Query:   180 ERDVGCKFEFVSPPVVEDVLESSAEQVVA 208
                +    E  +  V ED++ S AE+  A
Sbjct:   602 INIL----ERANQSVPEDLV-SMAERYKA 625


>UNIPROTKB|Q9NXZ2 [details] [associations]
            symbol:DDX43 "Probable ATP-dependent RNA helicase DDX43"
            species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=TAS] [GO:0005622 "intracellular"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
            HOVERGEN:HBG015893 EMBL:AJ278110 EMBL:AL136751 EMBL:BC066938
            IPI:IPI00032899 RefSeq:NP_061135.2 UniGene:Hs.125507
            ProteinModelPortal:Q9NXZ2 SMR:Q9NXZ2 STRING:Q9NXZ2
            PhosphoSite:Q9NXZ2 DMDM:145559466 PRIDE:Q9NXZ2 DNASU:55510
            Ensembl:ENST00000370336 GeneID:55510 KEGG:hsa:55510 UCSC:uc003pgw.3
            CTD:55510 GeneCards:GC06P074161 HGNC:HGNC:18677 HPA:HPA031380
            HPA:HPA031381 MIM:606286 neXtProt:NX_Q9NXZ2 PharmGKB:PA134988734
            InParanoid:Q9NXZ2 OMA:VLDITHV OrthoDB:EOG43BMNQ PhylomeDB:Q9NXZ2
            ChiTaRS:DDX43 GenomeRNAi:55510 NextBio:59918 ArrayExpress:Q9NXZ2
            Bgee:Q9NXZ2 CleanEx:HS_DDX43 Genevestigator:Q9NXZ2
            GermOnline:ENSG00000080007 Uniprot:Q9NXZ2
        Length = 648

 Score = 289 (106.8 bits), Expect = 1.3e-24, P = 1.3e-24
 Identities = 67/180 (37%), Positives = 98/180 (54%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             ++ SAT P  V +L++ YL  P+ I  VG  D      +K   I TT   K + +   + 
Sbjct:   424 VMTSATWPHSVHRLAQSYLKEPM-IVYVGTLDLVAVSSVKQNIIVTTEEEKWSHMQTFLQ 482

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHGDISQHQRERTLNGFRQGKFTVLV 119
               +   K IVF   K  AD +S  L    I+ E+LHGD  Q  RE+ L  F+ GK  +L+
Sbjct:   483 SMSSTDKVIVFVSRKAVADHLSSDLILGNISVESLHGDREQRDREKALENFKTGKVRILI 542

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATD+A+RGLD+ +V  + +++ P + E +VHR GRTGRAG+ G +I   T +  R    L
Sbjct:   543 ATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTLTRNDWRVASEL 602


>ASPGD|ASPL0000069536 [details] [associations]
            symbol:AN7424 species:162425 "Emericella nidulans"
            [GO:0000464 "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA
            from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003723 EMBL:AACD01000129 EMBL:BN001304 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
            eggNOG:COG0513 HOGENOM:HOG000268804 KO:K14811 RefSeq:XP_680693.1
            GeneID:2869574 KEGG:ani:AN7424.2 OrthoDB:EOG42JS0S Uniprot:Q5AWA6
        Length = 488

 Score = 285 (105.4 bits), Expect = 1.4e-24, P = 1.4e-24
 Identities = 66/178 (37%), Positives = 100/178 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQ--DEKLAEGIKLYAISTTATSKRTILSDL 58
             ++F+AT P  V+ L+  ++ +P+ + + G+   D +    IK          K   L  +
Sbjct:   255 VMFTATWPPIVRNLASTFMTSPVTVTIGGDPSADPRANSRIKQVVEVVKPHEKEQRLVQI 314

Query:    59 ITVYAKG--GKTIVFTQTKRDADEVSLAL-TSIIASEALHGDISQHQRERTLNGFRQGKF 115
             +  + +G   K + F   K++A  V   L T       +HGD+SQ +R R+L  F+ G  
Sbjct:   315 LNRHQRGTPDKVLAFCLYKKEAMRVERLLRTKGFKVAGIHGDLSQQERFRSLEAFKSGAA 374

Query:   116 TVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQR 173
             TVLVATDVAARGLDIP+V L+++   P   E +VHR GRTGRAG +G AI +FT + +
Sbjct:   375 TVLVATDVAARGLDIPHVKLVVNVTFPLTVEDYVHRIGRTGRAGADGHAITLFTETDK 432


>TAIR|locus:2032910 [details] [associations]
            symbol:RH36 "RNA helicase 36" species:3702 "Arabidopsis
            thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
            [GO:0006364 "rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
            development" evidence=IMP] [GO:0009791 "post-embryonic development"
            evidence=IMP] [GO:0090406 "pollen tube" evidence=IDA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0009561 "megagametogenesis"
            evidence=IMP] [GO:0006606 "protein import into nucleus"
            evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
            GO:GO:0009791 GO:GO:0009561 EMBL:AC006341 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
            HOGENOM:HOG000268802 OMA:EVRTVEQ GO:GO:0090406 IPI:IPI00521131
            PIR:G86297 RefSeq:NP_173078.1 UniGene:At.51634
            ProteinModelPortal:Q9SA27 SMR:Q9SA27 PaxDb:Q9SA27 PRIDE:Q9SA27
            EnsemblPlants:AT1G16280.1 GeneID:838197 KEGG:ath:AT1G16280
            KEGG:dosa:Os07t0633500-00 GeneFarm:1012 TAIR:At1g16280
            InParanoid:Q9SA27 PhylomeDB:Q9SA27 ProtClustDB:CLSN2679781
            Genevestigator:Q9SA27 GermOnline:AT1G16280 Uniprot:Q9SA27
        Length = 491

 Score = 285 (105.4 bits), Expect = 1.4e-24, P = 1.4e-24
 Identities = 71/203 (34%), Positives = 113/203 (55%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSATM S ++ L  ++  N         +  K  + +    I     +K   L  +++
Sbjct:   238 LLFSATMTSNLQALL-EHSSNKAYF-YEAYEGLKTVDTLTQQFIFEDKDAKELYLVHILS 295

Query:    61 -VYAKGGKT-IVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
              +  KG ++ ++F  T R    +SL L  + + + A+H   SQ  R   L+ F+ GK  +
Sbjct:   296 QMEDKGIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKVPI 355

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             L+ATDVA+RGLDIP VDL+I+Y++P DP  +VHR GRT RAG+ G A+ + T +  + + 
Sbjct:   356 LLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIITETDVKLIH 415

Query:   178 SLERDVGCKFEFVSPPVVEDVLE 200
              +E +VG K E  +  V+ D LE
Sbjct:   416 KIEEEVGKKMEPYNKKVITDSLE 438


>FB|FBgn0263231 [details] [associations]
            symbol:bel "belle" species:7227 "Drosophila melanogaster"
            [GO:0007286 "spermatid development" evidence=IMP] [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS;IMP] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007283
            "spermatogenesis" evidence=IMP] [GO:0002168 "instar larval
            development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
            [GO:0016442 "RNA-induced silencing complex" evidence=IDA]
            [GO:0016246 "RNA interference" evidence=IMP] [GO:0005811 "lipid
            particle" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0005875 "microtubule associated complex" evidence=IDA]
            [GO:0043025 "neuronal cell body" evidence=IDA] [GO:0010468
            "regulation of gene expression" evidence=IMP] [GO:0000070 "mitotic
            sister chromatid segregation" evidence=IMP] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
            GO:GO:0005524 GO:GO:0005875 GO:GO:0016246 GO:GO:0007286
            GO:GO:0005811 GO:GO:0043025 GO:GO:0048477 GO:GO:0003723
            GO:GO:0000070 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 GO:GO:0002168 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
            GeneTree:ENSGT00620000087942 KO:K11594 HSSP:P09052 EMBL:AY089613
            RefSeq:NP_536783.1 UniGene:Dm.7823 ProteinModelPortal:Q9VHP0
            SMR:Q9VHP0 IntAct:Q9VHP0 STRING:Q9VHP0 PaxDb:Q9VHP0 PRIDE:Q9VHP0
            EnsemblMetazoa:FBtr0081888 GeneID:45826 KEGG:dme:Dmel_CG9748
            UCSC:CG9748-RA CTD:100035747 FlyBase:FBgn0263231 InParanoid:Q9VHP0
            OMA:TILWVYE OrthoDB:EOG4DNCKG PhylomeDB:Q9VHP0 GenomeRNAi:45826
            NextBio:838377 Bgee:Q9VHP0 Uniprot:Q9VHP0
        Length = 798

 Score = 290 (107.1 bits), Expect = 1.7e-24, P = 1.7e-24
 Identities = 77/208 (37%), Positives = 112/208 (53%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             ++FSAT P  +++L+  +L N   L +  VG+  E + + I L+        KR+ L DL
Sbjct:   491 LMFSATFPKQIQELASDFLSNYIFLAVGRVGSTSENITQTI-LWVYEP---DKRSYLLDL 546

Query:    59 ITV------YAKGGKTIVFTQTKRDADEVSLALTSIIAS-EALHGDISQHQRERTLNGFR 111
             ++       Y K   T++F +TK+ AD +   L        ++HGD +Q +RE  L  FR
Sbjct:   547 LSSIRDGPEYTKDSLTLIFVETKKGADSLEEFLYQCNHPVTSIHGDRTQKEREEALRCFR 606

Query:   112 QGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSS 171
              G   +LVAT VAARGLDIP+V  +I+++LP+D E +VHR GRTGR G  G A   F   
Sbjct:   607 SGDCPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNEK 666

Query:   172 QRRTVRSL-ERDVGCKFEFVSPPVVEDV 198
              R     L E  +  K E   P  +ED+
Sbjct:   667 NRNICSDLLELLIETKQEI--PSFMEDM 692


>UNIPROTKB|Q3MSQ8 [details] [associations]
            symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
            species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
            evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
            GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
            HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
            ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
        Length = 724

 Score = 289 (106.8 bits), Expect = 1.7e-24, P = 1.7e-24
 Identities = 73/206 (35%), Positives = 115/206 (55%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             ++FSAT PS ++ L+R+ L  P  + +V  Q       ++   I      K+  L +++ 
Sbjct:   476 LMFSATFPSSIQSLAREIL-KPDYLFVVVGQVGGACSDVEQMVIEVDEFGKKDKLMEILQ 534

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                   +T+VF +TK+ AD ++  L    + S ++HGD  Q +RE  L  FR G+  V+V
Sbjct:   535 EIGSE-RTMVFVKTKKKADFIATFLCQEKVPSTSIHGDREQKERETALRDFRTGQCPVIV 593

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTS---SQRRTV 176
             AT VAARGLDI NV  +I++++P+D + +VHR GRTGR G  G AI  F      ++R  
Sbjct:   594 ATSVAARGLDIENVSYVINFDIPDDIDEYVHRIGRTGRCGNTGRAISFFDKRGDDEQRIA 653

Query:   177 RSLERDVGCKFEFVSPPVVEDVLESS 202
             RSL + +    + V P  +E+V  S+
Sbjct:   654 RSLVKVLSDAHQEV-PAWLEEVAFSA 678


>UNIPROTKB|I3LRT7 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
            GeneTree:ENSGT00620000087942 EMBL:CU929824
            Ensembl:ENSSSCT00000031627 OMA:VGDERTM Uniprot:I3LRT7
        Length = 290

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 67/180 (37%), Positives = 102/180 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             ++FSAT P  +++L+ ++L +      VG Q       ++   +     SKR  L +++ 
Sbjct:    45 LMFSATFPEEIQRLAGEFLKSNYLFVAVG-QVGGACRDVQQTILQVGQYSKREKLVEILR 103

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                   +T+VF +TK+ AD ++  L    I++ ++HGD  Q +RE+ L  FR GK  VLV
Sbjct:   104 NIGDE-RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLV 162

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             AT VAARGLDI NV  +I+++LP+  + +VHR GRTGR G  G AI  F  S     + L
Sbjct:   163 ATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDESDSHLAQPL 222


>GENEDB_PFALCIPARUM|PFL1310c [details] [associations]
            symbol:PFL1310c "ATP-dependent RNA helicase,
            putative" species:5833 "Plasmodium falciparum" [GO:0016070 "RNA
            metabolic process" evidence=ISS] [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE014188 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
            HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_001350668.1
            ProteinModelPortal:Q8I5E7 PRIDE:Q8I5E7
            EnsemblProtists:PFL1310c:mRNA GeneID:811314 KEGG:pfa:PFL1310c
            EuPathDB:PlasmoDB:PF3D7_1227100 ProtClustDB:CLSZ2500975
            Uniprot:Q8I5E7
        Length = 742

 Score = 287 (106.1 bits), Expect = 3.0e-24, P = 3.0e-24
 Identities = 62/172 (36%), Positives = 104/172 (60%)

Query:     1 MLF-SATMPSWVKKLSRKYLD-NPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             +LF +AT P  V+KL+  +   +P+ I  +G  +    + I+   I +++   +  L D 
Sbjct:   535 LLFLTATWPEQVRKLAYDFCSYDPVKIQ-IGKNELTANKNIEQNVIISSSIDMKKKLLDW 593

Query:    59 ITVYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHGDISQHQRERTLNGFRQGKFTV 117
             +    +  K ++F  TKR+ D +   L      + ++HGD  Q +R+R LN ++  +  +
Sbjct:   594 LKENYENNKILIFCDTKRNCDNLCKELRYHQYNALSIHGDKQQRERDRILNNYKTDRCNI 653

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 169
             LVATDVA+RGLDI N+ ++I+Y++PN  E ++HR GRTGRAGK+G +IL F+
Sbjct:   654 LVATDVASRGLDIKNISVVINYDIPNTIEDYIHRIGRTGRAGKKGKSILFFS 705


>ASPGD|ASPL0000013201 [details] [associations]
            symbol:AN4233 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 EMBL:BN001302
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0008026 EMBL:AACD01000068 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
            RefSeq:XP_661837.1 ProteinModelPortal:Q5B5E7 SMR:Q5B5E7
            STRING:Q5B5E7 EnsemblFungi:CADANIAT00004427 GeneID:2873652
            KEGG:ani:AN4233.2 OrthoDB:EOG4ZPJ3P Uniprot:Q5B5E7
        Length = 465

 Score = 281 (104.0 bits), Expect = 3.1e-24, P = 3.1e-24
 Identities = 68/169 (40%), Positives = 96/169 (56%)

Query:     2 LFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITV 61
             LFSATM + V+ L R  L NP+ +  V ++ + ++     Y I      K   L  L+  
Sbjct:   225 LFSATMSTKVESLQRASLSNPVRVS-VSSKYQTVSTLQSSY-ICIPHKHKNLYLVYLLNE 282

Query:    62 YAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVA 120
             +A G   I+FT T  +   V+  L ++   +  LHG +SQ  R   L  FR     +LVA
Sbjct:   283 FA-GQSAIIFTTTVHETQRVAFMLRALGFGAIPLHGQLSQSARLGALGKFRSRSRDILVA 341

Query:   121 TDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 169
             TDVAARGLDIP+VD++ +++LP D +T++HR GRT RAGK G AI   T
Sbjct:   342 TDVAARGLDIPSVDVVFNFDLPMDSKTYIHRVGRTARAGKSGVAISFVT 390


>TAIR|locus:2130918 [details] [associations]
            symbol:AT4G16630 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0003723 EMBL:Z97341 EMBL:AL161544 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000265456 KO:K13181
            OMA:RIRKRDH EMBL:AJ010475 EMBL:AK228353 IPI:IPI00542014 PIR:D71433
            PIR:T51310 RefSeq:NP_193396.3 UniGene:At.49
            ProteinModelPortal:Q9ZRZ8 SMR:Q9ZRZ8 IntAct:Q9ZRZ8 STRING:Q9ZRZ8
            PaxDb:Q9ZRZ8 PRIDE:Q9ZRZ8 EnsemblPlants:AT4G16630.1 GeneID:827364
            KEGG:ath:AT4G16630 GeneFarm:955 TAIR:At4g16630 InParanoid:Q9ZRZ8
            PhylomeDB:Q9ZRZ8 ProtClustDB:CLSN2690957 Genevestigator:Q9ZRZ8
            GermOnline:AT4G16630 Uniprot:Q9ZRZ8
        Length = 789

 Score = 287 (106.1 bits), Expect = 3.4e-24, P = 3.4e-24
 Identities = 80/225 (35%), Positives = 124/225 (55%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNI--DLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             MLFSATM   VK+L +  L+ PL +  D    +   L E +     +  A  +  +LS L
Sbjct:   348 MLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLS-L 406

Query:    59 ITVYAKGGKTIVFTQTKRDADEVSL--ALTSIIASEALHGDISQHQRERTLNGFRQGKFT 116
              T   K  K I+F+ TK+ A  + +   L  + A+E LHG+++Q QR  +L  FR+ +  
Sbjct:   407 CTRTFKS-KVIIFSGTKQAAHRLKILFGLAGLKAAE-LHGNLTQAQRLDSLELFRKQEVD 464

Query:   117 VLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTV 176
              L+ATDVAARGLDI  V  +I+Y  P + +++VHR GRT RAG+EG A+   T S R  +
Sbjct:   465 FLIATDVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAGREGYAVTFVTDSDRSLL 524

Query:   177 RSLERDVGCKFEF-VSPP--VVE--DVLESSAEQVVATLNGVHPE 216
             + + + VG K +  V P   +V+   +++   +Q  A ++    E
Sbjct:   525 KVIAKKVGSKLKSRVIPEQSIVKWSQIIDEMEDQYSAVISAERDE 569


>POMBASE|SPAC1F5.10 [details] [associations]
            symbol:SPAC1F5.10 "ATP-dependent RNA helicase
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
            "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
            processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 PomBase:SPAC1F5.10 GO:GO:0005829
            GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 KO:K13025 OMA:EDWKFDT
            OrthoDB:EOG4HTD1W PIR:T38085 RefSeq:NP_592863.1
            ProteinModelPortal:Q10055 SMR:Q10055 PRIDE:Q10055
            EnsemblFungi:SPAC1F5.10.1 GeneID:2541602 KEGG:spo:SPAC1F5.10
            NextBio:20802696 Uniprot:Q10055
        Length = 394

 Score = 278 (102.9 bits), Expect = 3.9e-24, P = 3.9e-24
 Identities = 62/183 (33%), Positives = 105/183 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             ++ SAT+P  V +++ K+  NP+ I LV  +DE   EG+K Y I+      K   L DL 
Sbjct:   198 VVVSATLPQDVLEMTNKFTTNPVRI-LV-KRDELTLEGLKQYFIAVEKEEWKFDTLCDLY 255

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  ++R  D ++  +        ++HG++ Q +R+  +  FRQG   VL
Sbjct:   256 DTLTIT-QAVIFCNSRRKVDWLTEKMREANFTVTSMHGEMPQKERDAIMQDFRQGNSRVL 314

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             + TD+ ARG+D+  V L+I+Y+LP + E ++HR GR+GR G++G AI   T+   R +R 
Sbjct:   315 ICTDIWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTNEDVRILRD 374

Query:   179 LER 181
             +E+
Sbjct:   375 IEQ 377


>TIGR_CMR|SPO_3833 [details] [associations]
            symbol:SPO_3833 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            KO:K05592 InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_169021.1
            ProteinModelPortal:Q5LLT8 GeneID:3196362 KEGG:sil:SPO3833
            PATRIC:23381169 HOGENOM:HOG000268794 OMA:MQHRSGR Uniprot:Q5LLT8
        Length = 709

 Score = 284 (105.0 bits), Expect = 5.8e-24, P = 5.8e-24
 Identities = 75/245 (30%), Positives = 121/245 (49%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSAT+   + +L++ Y      I  +G   E+    I   A+  +       + +L+ 
Sbjct:   204 LLFSATVSPAIAELAKTYQRQAARISTLGG--ERQHSDISYQAVQVSGGDGEHAIINLLR 261

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
              +      IVF  T+     ++  L +   A  +L G++SQ +R   L   R G+  V V
Sbjct:   262 FH-DAPTAIVFANTRAAVARLTARLANRGFAVVSLSGELSQDERSHALQAMRDGRARVCV 320

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARG+D+PN+DL+IH +LP + E  +HRSGRTGRAG++G + L+      +    L
Sbjct:   321 ATDVAARGIDLPNLDLVIHADLPTNTEGLLHRSGRTGRAGRKGISALIVPDKISKKASRL 380

Query:   180 ERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGTDALAA 239
              +    + E+   P  ED+L     +++A      P   E  T  A  L+E+     +A 
Sbjct:   381 LKWAKIEAEWTQAPTPEDILAKDEARLLADPLWTDPVEDEE-TRIAAGLMEQFTAQQIAV 439

Query:   240 ALAQL 244
             A  +L
Sbjct:   440 ACLRL 444


>DICTYBASE|DDB_G0283661 [details] [associations]
            symbol:ddx3 "DEAD/DEAH box helicase" species:44689
            "Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0006413 "translational initiation" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 dictyBase:DDB_G0283661 GO:GO:0005524 GO:GO:0005737
            EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0006397
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            KO:K11594 HSSP:P09052 RefSeq:XP_638950.1 ProteinModelPortal:Q54QS3
            SMR:Q54QS3 PRIDE:Q54QS3 EnsemblProtists:DDB0233447 GeneID:8624189
            KEGG:ddi:DDB_G0283661 OMA:SEHICAP Uniprot:Q54QS3
        Length = 712

 Score = 284 (105.0 bits), Expect = 5.8e-24, P = 5.8e-24
 Identities = 64/176 (36%), Positives = 100/176 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             ++FSAT P  ++ L+  +L N   L + +VG   + + + I+ Y +      K + L D 
Sbjct:   443 LMFSATFPKQIQNLAADFLYNYIFLKVGVVGTT-QNITQRIE-YVVEE---DKNSYLLDY 497

Query:    59 ITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
             ++     G  ++F +TKR  D ++  L      +  +HGD++Q +RE  L  FR      
Sbjct:   498 LSGLKSDGLCLIFVETKRSCDTLTYFLNQRNFPTTCIHGDLTQPERENALQSFRSFATPF 557

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQR 173
             LVATD+A+RGL I NV+L+I+++LP D   +VHR GRTGRAGK+G AI  F    +
Sbjct:   558 LVATDIASRGLHIGNVNLVINFDLPTDIHIYVHRIGRTGRAGKKGLAISFFNEKNK 613


>TAIR|locus:2065215 [details] [associations]
            symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
            HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
            IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
            ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
            PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
            KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
            OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
            Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
        Length = 760

 Score = 284 (105.0 bits), Expect = 6.7e-24, P = 6.7e-24
 Identities = 73/202 (36%), Positives = 111/202 (54%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDL--VGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             +LFSATMP  V+KL+R+ L +P+ + +  VG  +E + + + +  I + A     +L  L
Sbjct:   410 LLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQVVNV--IPSDAEKLPWLLEKL 467

Query:    59 ITVYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHGDISQHQRERTLNGFRQGKFTV 117
               +  +G   +VF   K   DE+   LT +     ALHGD  Q  R  TL  F+ G   V
Sbjct:   468 PGMIDEGD-VLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHV 526

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAG-KEGTAILMFTSSQRRTV 176
             L+ATDVAARGLDI ++  +++Y++  D +  VHR GRTGRAG ++G A  + T  + R  
Sbjct:   527 LIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREARFA 586

Query:   177 RSLERDVGCKFEFVSPPVVEDV 198
               L   +    + V PP + D+
Sbjct:   587 GELVNSLVAAGQNV-PPELTDL 607


>UNIPROTKB|A7E307 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0072358 "cardiovascular system development"
            evidence=IEA] [GO:0009791 "post-embryonic development"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
            CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
            GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
            IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
            Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
            InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
        Length = 650

 Score = 282 (104.3 bits), Expect = 7.7e-24, P = 7.7e-24
 Identities = 65/199 (32%), Positives = 113/199 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGI-KLYAISTTATSKRTILSDLI 59
             +++SAT P  V++L+  +L +   I+ VGN +      I ++  +   +     ++  + 
Sbjct:   274 LMWSATWPKEVRQLAEDFLRDYTQIN-VGNLELSANHNILQIVDVCMESEKDHKLIQLME 332

Query:    60 TVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
              + A K  KTI+F +TKR  D+++  +      +  +HGD SQ +R+  LN FR GK  +
Sbjct:   333 EIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPI 392

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             L+ATDVA+RGLD+ +V  +I+Y+ PN  E +VHR GRT R+  +GTA   FT    +  R
Sbjct:   393 LIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAR 452

Query:   178 SLERDVGCKFEFVSPPVVE 196
              L + +    + ++P +++
Sbjct:   453 ELIKVLEEANQAINPKLMQ 471


>UNIPROTKB|E2RJ60 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
            Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
        Length = 650

 Score = 282 (104.3 bits), Expect = 7.7e-24, P = 7.7e-24
 Identities = 65/199 (32%), Positives = 113/199 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGI-KLYAISTTATSKRTILSDLI 59
             +++SAT P  V++L+  +L +   I+ VGN +      I ++  +   +     ++  + 
Sbjct:   274 LMWSATWPKEVRQLAEDFLRDYTQIN-VGNLELSANHNILQIVDVCMESEKDHKLIQLME 332

Query:    60 TVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
              + A K  KTI+F +TKR  D+++  +      +  +HGD SQ +R+  LN FR GK  +
Sbjct:   333 EIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPI 392

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             L+ATDVA+RGLD+ +V  +I+Y+ PN  E +VHR GRT R+  +GTA   FT    +  R
Sbjct:   393 LIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAR 452

Query:   178 SLERDVGCKFEFVSPPVVE 196
              L + +    + ++P +++
Sbjct:   453 ELIKVLEEANQAINPKLMQ 471


>MGI|MGI:1914290 [details] [associations]
            symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003713 "transcription coactivator activity" evidence=ISO]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0009791
            "post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
            evidence=ISO] [GO:0033148 "positive regulation of intracellular
            estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISO] [GO:0072358 "cardiovascular system
            development" evidence=IMP] [GO:2001014 "regulation of skeletal
            muscle cell differentiation" evidence=ISO] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
            GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
            GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
            ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
            EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
            RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
            UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
            IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
            REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
            GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
            InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
            CleanEx:MM_DDX17 Genevestigator:Q501J6
            GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
        Length = 650

 Score = 282 (104.3 bits), Expect = 7.7e-24, P = 7.7e-24
 Identities = 65/199 (32%), Positives = 113/199 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGI-KLYAISTTATSKRTILSDLI 59
             +++SAT P  V++L+  +L +   I+ VGN +      I ++  +   +     ++  + 
Sbjct:   274 LMWSATWPKEVRQLAEDFLRDYTQIN-VGNLELSANHNILQIVDVCMESEKDHKLIQLME 332

Query:    60 TVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
              + A K  KTI+F +TKR  D+++  +      +  +HGD SQ +R+  LN FR GK  +
Sbjct:   333 EIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPI 392

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             L+ATDVA+RGLD+ +V  +I+Y+ PN  E +VHR GRT R+  +GTA   FT    +  R
Sbjct:   393 LIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAR 452

Query:   178 SLERDVGCKFEFVSPPVVE 196
              L + +    + ++P +++
Sbjct:   453 ELIKVLEEANQAINPKLMQ 471


>UNIPROTKB|E9PT29 [details] [associations]
            symbol:Ddx17 "Protein Ddx17" species:10116 "Rattus
            norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 GO:GO:0072358 IPI:IPI00858352
            PRIDE:E9PT29 Ensembl:ENSRNOT00000018185 Uniprot:E9PT29
        Length = 651

 Score = 282 (104.3 bits), Expect = 7.8e-24, P = 7.8e-24
 Identities = 65/199 (32%), Positives = 113/199 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGI-KLYAISTTATSKRTILSDLI 59
             +++SAT P  V++L+  +L +   I+ VGN +      I ++  +   +     ++  + 
Sbjct:   273 LMWSATWPKEVRQLAEDFLRDYTQIN-VGNLELSANHNILQIVDVCMESEKDHKLIQLME 331

Query:    60 TVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
              + A K  KTI+F +TKR  D+++  +      +  +HGD SQ +R+  LN FR GK  +
Sbjct:   332 EIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPI 391

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             L+ATDVA+RGLD+ +V  +I+Y+ PN  E +VHR GRT R+  +GTA   FT    +  R
Sbjct:   392 LIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAR 451

Query:   178 SLERDVGCKFEFVSPPVVE 196
              L + +    + ++P +++
Sbjct:   452 ELIKVLEEANQAINPKLMQ 470


>UNIPROTKB|Q90ZF6 [details] [associations]
            symbol:olvas "VASA" species:8090 "Oryzias latipes"
            [GO:0043186 "P granule" evidence=IDA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GO:GO:0043186 HSSP:Q58083 HOVERGEN:HBG015893 EMBL:AB063484
            RefSeq:NP_001098146.1 UniGene:Ola.181 ProteinModelPortal:Q90ZF6
            SMR:Q90ZF6 GeneID:100049226 CTD:100049226 Uniprot:Q90ZF6
        Length = 617

 Score = 281 (104.0 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 66/181 (36%), Positives = 102/181 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             ++FSAT P  +++L+  +L        VG       + ++   +  T  +KR  L DL+ 
Sbjct:   371 LMFSATFPEDIQRLAADFLKVDYLFVAVGVVGGACTD-VEQTFLQVTKFNKREQLLDLLR 429

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                   +T+VF +TKR AD ++  L    + + ++HGD  Q +RE+ L  FR GK  VLV
Sbjct:   430 TIGSE-RTMVFVETKRQADFIAAFLCQEKVPTTSIHGDREQREREKALADFRSGKCPVLV 488

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSS-QRRTVRS 178
             AT VA+RGLDIP+V  +++++LPN  + +VHR GRTGR G  G A+  +      +  RS
Sbjct:   489 ATSVASRGLDIPDVQHVVNFDLPNTIDDYVHRIGRTGRCGNTGRAVSFYDPDVDSQLARS 548

Query:   179 L 179
             L
Sbjct:   549 L 549


>DICTYBASE|DDB_G0293064 [details] [associations]
            symbol:DDB_G0293064 species:44689 "Dictyostelium
            discoideum" [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 dictyBase:DDB_G0293064 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AAFI02000199
            RefSeq:XP_629301.1 ProteinModelPortal:Q54CB8
            EnsemblProtists:DDB0191757 GeneID:8629024 KEGG:ddi:DDB_G0293064
            InParanoid:Q54CB8 OMA:VLYWSAT Uniprot:Q54CB8
        Length = 573

 Score = 280 (103.6 bits), Expect = 9.1e-24, P = 9.1e-24
 Identities = 60/172 (34%), Positives = 103/172 (59%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQ---DEKLAEGIKLYAISTTATSKRTILSD 57
             + +SAT P  V   + K++  P+ + +  +Q   ++ +++  K+  + T A     ++  
Sbjct:   321 LYWSATWPKKVSSFAEKHIRTPIRLQIGSSQLTANKNISQKFKI--VPTDADKVDALMDT 378

Query:    58 LITVYAKGGK--TIVFTQTKRDADEVSLALTSI---IASEALHGDISQHQRERTLNGFRQ 112
             L  +Y+   K  T++FT TK+ AD +   + S    +  + LHGD+ Q++RER +  F+ 
Sbjct:   379 LGEIYSADEKAQTLIFTMTKKGADTLKHYIQSNGDNVRIDTLHGDVDQNRRERIVQDFKN 438

Query:   113 GKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTA 164
              +  ++VATDVA+RGLDI  +  +I++ LP+D ET+VHR GRTGRAG  GT+
Sbjct:   439 KRLDIVVATDVASRGLDIKGISHVINFSLPSDCETYVHRIGRTGRAGALGTS 490


>UNIPROTKB|Q92841 [details] [associations]
            symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0003713 "transcription coactivator activity" evidence=IDA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0033148 "positive
            regulation of intracellular estrogen receptor signaling pathway"
            evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:2001014 "regulation of
            skeletal muscle cell differentiation" evidence=IMP] [GO:0005515
            "protein binding" evidence=IPI] [GO:0003724 "RNA helicase activity"
            evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
            [GO:0008186 "RNA-dependent ATPase activity" evidence=TAS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005730
            EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0003723
            GO:GO:0006396 GO:GO:0003713 GO:GO:0033148 GO:GO:0030331
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 GO:GO:0008186 EMBL:U59321 EMBL:CR456432
            EMBL:AL713763 EMBL:Z97056 EMBL:BC000595 IPI:IPI00651653
            IPI:IPI00651677 IPI:IPI00889541 IPI:IPI01022339 PIR:S72367
            RefSeq:NP_006377.2 UniGene:Hs.706116 UniGene:Hs.725500
            ProteinModelPortal:Q92841 SMR:Q92841 DIP:DIP-29843N IntAct:Q92841
            MINT:MINT-4545892 STRING:Q92841 PhosphoSite:Q92841 DMDM:3122595
            REPRODUCTION-2DPAGE:IPI00023785 PaxDb:Q92841 PRIDE:Q92841
            DNASU:10521 Ensembl:ENST00000403230 GeneID:10521 KEGG:hsa:10521
            UCSC:uc003avx.4 CTD:10521 GeneCards:GC22M038879 HGNC:HGNC:2740
            HPA:CAB024908 MIM:608469 neXtProt:NX_Q92841 PharmGKB:PA27206
            HOVERGEN:HBG015893 InParanoid:Q92841 KO:K13178 ChiTaRS:DDX17
            GenomeRNAi:10521 NextBio:39902 ArrayExpress:Q92841 Bgee:Q92841
            CleanEx:HS_DDX17 Genevestigator:Q92841 GermOnline:ENSG00000100201
            GO:GO:2001014 Uniprot:Q92841
        Length = 729

 Score = 282 (104.3 bits), Expect = 1.0e-23, P = 1.0e-23
 Identities = 65/199 (32%), Positives = 113/199 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGI-KLYAISTTATSKRTILSDLI 59
             +++SAT P  V++L+  +L +   I+ VGN +      I ++  +   +     ++  + 
Sbjct:   353 LMWSATWPKEVRQLAEDFLRDYTQIN-VGNLELSANHNILQIVDVCMESEKDHKLIQLME 411

Query:    60 TVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
              + A K  KTI+F +TKR  D+++  +      +  +HGD SQ +R+  LN FR GK  +
Sbjct:   412 EIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPI 471

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             L+ATDVA+RGLD+ +V  +I+Y+ PN  E +VHR GRT R+  +GTA   FT    +  R
Sbjct:   472 LIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAR 531

Query:   178 SLERDVGCKFEFVSPPVVE 196
              L + +    + ++P +++
Sbjct:   532 ELIKVLEEANQAINPKLMQ 550


>UNIPROTKB|H3BLZ8 [details] [associations]
            symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791
            "post-embryonic development" evidence=IEA] [GO:0072358
            "cardiovascular system development" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0009791
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 EMBL:Z97056 HGNC:HGNC:2740
            ChiTaRS:DDX17 GO:GO:0072358 ProteinModelPortal:H3BLZ8 SMR:H3BLZ8
            Ensembl:ENST00000396821 Bgee:H3BLZ8 Uniprot:H3BLZ8
        Length = 731

 Score = 282 (104.3 bits), Expect = 1.0e-23, P = 1.0e-23
 Identities = 65/199 (32%), Positives = 113/199 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGI-KLYAISTTATSKRTILSDLI 59
             +++SAT P  V++L+  +L +   I+ VGN +      I ++  +   +     ++  + 
Sbjct:   353 LMWSATWPKEVRQLAEDFLRDYTQIN-VGNLELSANHNILQIVDVCMESEKDHKLIQLME 411

Query:    60 TVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
              + A K  KTI+F +TKR  D+++  +      +  +HGD SQ +R+  LN FR GK  +
Sbjct:   412 EIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPI 471

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             L+ATDVA+RGLD+ +V  +I+Y+ PN  E +VHR GRT R+  +GTA   FT    +  R
Sbjct:   472 LIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAR 531

Query:   178 SLERDVGCKFEFVSPPVVE 196
              L + +    + ++P +++
Sbjct:   532 ELIKVLEEANQAINPKLMQ 550


>UNIPROTKB|F1PID8 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 OMA:QQFPQPP EMBL:AAEX03007314
            Ensembl:ENSCAFT00000002162 Uniprot:F1PID8
        Length = 736

 Score = 282 (104.3 bits), Expect = 1.0e-23, P = 1.0e-23
 Identities = 65/199 (32%), Positives = 113/199 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGI-KLYAISTTATSKRTILSDLI 59
             +++SAT P  V++L+  +L +   I+ VGN +      I ++  +   +     ++  + 
Sbjct:   355 LMWSATWPKEVRQLAEDFLRDYTQIN-VGNLELSANHNILQIVDVCMESEKDHKLIQLME 413

Query:    60 TVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
              + A K  KTI+F +TKR  D+++  +      +  +HGD SQ +R+  LN FR GK  +
Sbjct:   414 EIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPI 473

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             L+ATDVA+RGLD+ +V  +I+Y+ PN  E +VHR GRT R+  +GTA   FT    +  R
Sbjct:   474 LIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAR 533

Query:   178 SLERDVGCKFEFVSPPVVE 196
              L + +    + ++P +++
Sbjct:   534 ELIKVLEEANQAINPKLMQ 552


>UNIPROTKB|F1SKQ0 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0072358 "cardiovascular system development"
            evidence=IEA] [GO:0009791 "post-embryonic development"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 GO:GO:0072358 OMA:QQFPQPP
            EMBL:FP102457 Ensembl:ENSSSCT00000000110 Uniprot:F1SKQ0
        Length = 736

 Score = 282 (104.3 bits), Expect = 1.0e-23, P = 1.0e-23
 Identities = 65/199 (32%), Positives = 113/199 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGI-KLYAISTTATSKRTILSDLI 59
             +++SAT P  V++L+  +L +   I+ VGN +      I ++  +   +     ++  + 
Sbjct:   355 LMWSATWPKEVRQLAEDFLRDYTQIN-VGNLELSANHNILQIVDVCMESEKDHKLIQLME 413

Query:    60 TVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
              + A K  KTI+F +TKR  D+++  +      +  +HGD SQ +R+  LN FR GK  +
Sbjct:   414 EIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPI 473

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             L+ATDVA+RGLD+ +V  +I+Y+ PN  E +VHR GRT R+  +GTA   FT    +  R
Sbjct:   474 LIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAR 533

Query:   178 SLERDVGCKFEFVSPPVVE 196
              L + +    + ++P +++
Sbjct:   534 ELIKVLEEANQAINPKLMQ 552


>UNIPROTKB|D4ADV9 [details] [associations]
            symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 IPI:IPI00782021 Ensembl:ENSRNOT00000060732
            Uniprot:D4ADV9
        Length = 674

 Score = 281 (104.0 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 74/204 (36%), Positives = 114/204 (55%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSAT P  +++L+ ++L +      VG Q       ++   +     SKR  L +++ 
Sbjct:   452 LLFSATFPEEIQRLAGEFLKSNYLFVAVG-QVGGACRDVQQSILQVGQYSKREKLVEILR 510

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                   +T+VF +TK+ AD ++  L    I++ ++HGD  Q +RE+ L  FR GK  VLV
Sbjct:   511 NIGDE-RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLV 569

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMF-TSSQRRTVRS 178
             AT VAARGLDI NV  +I+++LP+  + +VHR GRTGR G  G AI  F T S     + 
Sbjct:   570 ATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDTESDNHLAQP 629

Query:   179 LERDVGCKFEFVSPPVVEDVLESS 202
             L + +    + V P  +E++  SS
Sbjct:   630 LVKVLSDAQQDV-PAWLEEIAFSS 652


>GENEDB_PFALCIPARUM|PF14_0655 [details] [associations]
            symbol:PF14_0655 "RNA helicase-1, putative"
            species:5833 "Plasmodium falciparum" [GO:0003729 "mRNA binding"
            evidence=ISS] [GO:0003743 "translation initiation factor activity"
            evidence=ISS] [GO:0000339 "RNA cap binding" evidence=ISS]
            [GO:0006446 "regulation of translational initiation" evidence=ISS]
            [GO:0016281 "eukaryotic translation initiation factor 4F complex"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
            GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
            RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
            IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
            GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
            ProtClustDB:PTZ00424 Uniprot:Q8IKF0
        Length = 398

 Score = 276 (102.2 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 66/202 (32%), Positives = 112/202 (55%)

Query:     2 LFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLIT 60
             LFSATMP  + +L+ +++ +P  I LV  +DE   EGI+ + ++      K   L DL  
Sbjct:   201 LFSATMPQEILELTTRFMRDPKTI-LV-KKDELTLEGIRQFYVAVEKEEWKLDTLCDLYE 258

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTS-IIASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                   ++I++  T++  D ++  + + +     +HGD+ Q  R+  +  FR G   VLV
Sbjct:   259 TLTIT-QSIIYCNTRKKVDILTQEMHNRLFTVSCMHGDMDQKDRDLIMREFRSGSTRVLV 317

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRT--VR 177
              TD+ ARG+D+  V L+I+Y+LP  P+T++HR GR+GR G++G AI   T+  +    ++
Sbjct:   318 TTDLLARGIDVQQVSLVINYDLPASPDTYIHRIGRSGRFGRKGVAINFVTNDDKEKDKLK 377

Query:   178 SLERDVGCKFEFVSPPVVEDVL 199
              +E     + E + P  V D L
Sbjct:   378 KIESYYSTQIEEM-PLEVADYL 398


>UNIPROTKB|Q8IKF0 [details] [associations]
            symbol:H45 "Helicase 45" species:36329 "Plasmodium
            falciparum 3D7" [GO:0006446 "regulation of translational
            initiation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
            GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
            RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
            IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
            GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
            ProtClustDB:PTZ00424 Uniprot:Q8IKF0
        Length = 398

 Score = 276 (102.2 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 66/202 (32%), Positives = 112/202 (55%)

Query:     2 LFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLIT 60
             LFSATMP  + +L+ +++ +P  I LV  +DE   EGI+ + ++      K   L DL  
Sbjct:   201 LFSATMPQEILELTTRFMRDPKTI-LV-KKDELTLEGIRQFYVAVEKEEWKLDTLCDLYE 258

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTS-IIASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                   ++I++  T++  D ++  + + +     +HGD+ Q  R+  +  FR G   VLV
Sbjct:   259 TLTIT-QSIIYCNTRKKVDILTQEMHNRLFTVSCMHGDMDQKDRDLIMREFRSGSTRVLV 317

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRT--VR 177
              TD+ ARG+D+  V L+I+Y+LP  P+T++HR GR+GR G++G AI   T+  +    ++
Sbjct:   318 TTDLLARGIDVQQVSLVINYDLPASPDTYIHRIGRSGRFGRKGVAINFVTNDDKEKDKLK 377

Query:   178 SLERDVGCKFEFVSPPVVEDVL 199
              +E     + E + P  V D L
Sbjct:   378 KIESYYSTQIEEM-PLEVADYL 398


>TIGR_CMR|CPS_1418 [details] [associations]
            symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
            HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
            GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
            BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
        Length = 401

 Score = 276 (102.2 bits), Expect = 1.6e-23, P = 1.6e-23
 Identities = 68/202 (33%), Positives = 113/202 (55%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSATM   V+ L+++ +  P+ I +  ++  K    I+ + ++    +K  +LS +IT
Sbjct:   187 LLFSATMSEEVRGLAKRTIHKPVEISIGADKASK--PKIEQWLVTVDKANKSALLSHIIT 244

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                   + ++F +TK  A ++   L    I +E++H   +Q  RE+ LN F+ GK   LV
Sbjct:   245 TQ-NWQQALIFIETKHGAAKLVSQLEKRGIVAESIHSGRAQDIREKILNDFKSGKIKFLV 303

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             AT +AARGLDI  +  +I+Y+LP   + ++HR GRTGRAG  G AI + +    R + ++
Sbjct:   304 ATAIAARGLDIGELSRVINYDLPAQVDDYIHRIGRTGRAGASGEAISLVSKDNFRELCAI 363

Query:   180 ERDVGC---KFEFVSPPVVEDV 198
             E  +G    + EF   PV + V
Sbjct:   364 ESRLGHIIERKEFEEFPVKKTV 385


>DICTYBASE|DDB_G0269192 [details] [associations]
            symbol:tifA "eukaryotic translation initiation factor
            4A" species:44689 "Dictyostelium discoideum" [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006413
            "translational initiation" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003743
            "translation initiation factor activity" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 dictyBase:DDB_G0269192 GO:GO:0005524 GO:GO:0005737
            EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003743
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            KO:K13025 OMA:LALGDFM RefSeq:XP_646270.1 ProteinModelPortal:Q55D61
            SMR:Q55D61 PRIDE:Q55D61 EnsemblProtists:DDB0191511 GeneID:8617226
            KEGG:ddi:DDB_G0269192 Uniprot:Q55D61
        Length = 405

 Score = 276 (102.2 bits), Expect = 1.9e-23, P = 1.9e-23
 Identities = 62/183 (33%), Positives = 104/183 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SAT+   V  ++ K++  P+ I L   +DE   +GIK + +S      K   L D+ 
Sbjct:   209 VLVSATLTQDVVSMTEKFMTKPVRILL--KRDELTLDGIKQFFVSVEKEDWKFGTLCDIY 266

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALTSIIASEA-LHGDISQHQRERTLNGFRQGKFTVL 118
                    + ++F  TK+  D+++  +     + A +HGD+ Q +RE  +  FR G+  VL
Sbjct:   267 DSLTIT-QAVIFCNTKKKVDQLTEQMRDANFTVASMHGDMVQKEREEIIKSFRSGENRVL 325

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             + TD+ ARG+D+  V L+I+Y+LP D E ++HR GR+GR G++G AI    +S  R +R 
Sbjct:   326 ITTDILARGIDVQQVSLVINYDLPIDRENYIHRIGRSGRFGRKGVAINFVKNSDIRILRD 385

Query:   179 LER 181
             +E+
Sbjct:   386 IEQ 388


>DICTYBASE|DDB_G0288501 [details] [associations]
            symbol:ddx42 "DEAD/DEAH box helicase" species:44689
            "Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            dictyBase:DDB_G0288501 GO:GO:0005524 GO:GO:0005634
            GenomeReviews:CM000154_GR GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:AAFI02000112 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
            KO:K12835 RefSeq:XP_636700.1 ProteinModelPortal:Q54IV3
            STRING:Q54IV3 EnsemblProtists:DDB0233432 GeneID:8626657
            KEGG:ddi:DDB_G0288501 OMA:DRDKRGG Uniprot:Q54IV3
        Length = 986

 Score = 281 (104.0 bits), Expect = 2.2e-23, P = 2.2e-23
 Identities = 62/199 (31%), Positives = 111/199 (55%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDL--VGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             +LFSAT    V++ +R  L +P+ I +  +G+ +  + + ++   +  + + K   L++ 
Sbjct:   487 LLFSATFKPNVEEFARTILSDPIKISIGMIGSANSDITQIVQ---VLKSDSDKWNWLTNQ 543

Query:    59 ITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
             + +    G  ++F  TK   +++S  LT     +  LHGD +Q +R +T+  F++GK  +
Sbjct:   544 LALLLSQGSVLIFVSTKVAVEQLSSNLTKFGFQTCTLHGDKNQIERSQTIQTFKEGKINI 603

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             L+ATDVAARGLDIP +  +++Y+   D E+  HR GRTGRAG  G A  + T        
Sbjct:   604 LIATDVAARGLDIPLIKNVVNYDTSRDIESHTHRIGRTGRAGNTGVAYTLITPKDIHFSV 663

Query:   178 SLERDVGCKFEFVSPPVVE 196
              L +++    +FV P +++
Sbjct:   664 DLIKNLESASQFVPPELID 682


>FB|FBgn0021995 [details] [associations]
            symbol:Rs1 "Rs1" species:7227 "Drosophila melanogaster"
            [GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0042254
            "ribosome biogenesis" evidence=NAS] [GO:0004004 "ATP-dependent RNA
            helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 EMBL:AE013599 GO:GO:0005524 GO:GO:0003676
            GO:GO:0042254 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GO:GO:0016779 HSSP:P10081 GeneTree:ENSGT00550000074997 KO:K13181
            CTD:6247 EMBL:BT004908 RefSeq:NP_651970.1 UniGene:Dm.11481
            SMR:Q7JQN4 STRING:Q7JQN4 EnsemblMetazoa:FBtr0088788 GeneID:44087
            KEGG:dme:Dmel_CG2173 UCSC:CG2173-RA FlyBase:FBgn0021995
            InParanoid:Q7JQN4 OMA:EHYIHRV OrthoDB:EOG42NGFQ GenomeRNAi:44087
            NextBio:836725 Uniprot:Q7JQN4
        Length = 782

 Score = 276 (102.2 bits), Expect = 2.5e-23, Sum P(2) = 2.5e-23
 Identities = 86/281 (30%), Positives = 139/281 (49%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRT-ILSDLI 59
             MLFSATM   VK L+   LD P+ + +  NQ        +   I       R  IL+ LI
Sbjct:   339 MLFSATMSEQVKDLAAVSLDKPIKVFVNNNQQVAFNLRQEFIRIREDKEGDREPILASLI 398

Query:    60 TVYAKGGKTIVFTQTKRDADE--VSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTV 117
                      +VF QTK+ A    + L L  + A E LHG+++Q QR  +L  F++ +  V
Sbjct:   399 C-RTFHDHCMVFVQTKKQAHRLHILLGLLGVRAGE-LHGNLTQQQRLESLKKFKEEQIDV 456

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             L+ATDVAARGLDI  V  +I++ +P   E ++HR GRT RAG+ G ++ +    +R+ V+
Sbjct:   457 LIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGRTARAGRAGISVSLAGEKERKIVK 516

Query:   178 SLERDVGCKFEF-VSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGTDA 236
              + ++     +  + PP   +++E    ++          S+E   P  Q +++E+  + 
Sbjct:   517 DIIKNAESTIKNRIIPP---EIIEKYRNKLT---------SLE---PEIQNILDEEQAER 561

Query:   237 -LAAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSR 276
              LA    QLS   R    ++  N  +GW   +  R++   R
Sbjct:   562 QLAKTEQQLSKTERKLLGQT--NERRGWFQTKQQREAEKDR 600

 Score = 41 (19.5 bits), Expect = 2.5e-23, Sum P(2) = 2.5e-23
 Identities = 10/26 (38%), Positives = 17/26 (65%)

Query:   318 PEEIAKELLNKQIPPGNTI-SKITKL 342
             PE++AKE   K+I   + + +K+ KL
Sbjct:   659 PEQLAKERAMKEIEKVSLVRAKMAKL 684


>ZFIN|ZDB-GENE-050522-359 [details] [associations]
            symbol:zgc:112350 "zgc:112350" species:7955 "Danio
            rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            ZFIN:ZDB-GENE-050522-359 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG100512 KO:K14777
            EMBL:BC095776 IPI:IPI00488135 RefSeq:NP_001018522.1
            UniGene:Dr.84733 ProteinModelPortal:Q502B4 SMR:Q502B4 GeneID:553715
            KEGG:dre:553715 NextBio:20880445 Uniprot:Q502B4
        Length = 512

 Score = 278 (102.9 bits), Expect = 3.1e-23, P = 3.1e-23
 Identities = 81/258 (31%), Positives = 131/258 (50%)

Query:     2 LFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITV 61
             LFSATM   V+KL R  L +P+   +  +      + ++ + I   +  K   L  ++  
Sbjct:   258 LFSATMTKKVQKLQRAALQDPVKCSV--SSKYATVDKLQQFYIFIPSKYKDCYLVSILNE 315

Query:    62 YAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVA 120
              A G   +VF  T  +   V+L L ++ I +  LHG +SQ++R   LN F+    +VL+A
Sbjct:   316 LA-GNSFMVFCGTCNNTQRVALLLRNLGITAIPLHGQMSQNKRLGALNKFKSKSRSVLLA 374

Query:   121 TDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 180
             TDVA+RGLDIP+VD +I++++P   + ++HR GRT RAG+ G +I   T       + +E
Sbjct:   375 TDVASRGLDIPHVDCVINFDIPTHSKDYIHRVGRTARAGRSGKSITFVTQYDVELFQRIE 434

Query:   181 RDVGCKFEFVSPPVVEDVL---ESSAE-QVVATLNGVHPESVEFFTPTAQRLIEEKGTDA 236
               +G K     P   E+V+   E  +E Q  A +  +   S +   P+A + ++E G  +
Sbjct:   435 ALIGKKLP-AFPTQEEEVMMLVERVSEAQRFARIE-MKESSEKRKRPSAAQEVDEDGEQS 492

Query:   237 LAAALAQLSGFSRPPSSR 254
                      G  R PS R
Sbjct:   493 SGVRKKVKGGGFRRPSRR 510


>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
            symbol:PF14_0437 "helicase, truncated,
            putative" species:5833 "Plasmodium falciparum" [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
            MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
            GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
            HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
        Length = 527

 Score = 278 (102.9 bits), Expect = 3.5e-23, P = 3.5e-23
 Identities = 67/201 (33%), Positives = 110/201 (54%)

Query:     1 MLFSATMPSWVKKLSRKYL-DNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLI 59
             +++SAT P  V+ L++    + P+ ++ VG+        IK          K   L  L+
Sbjct:   295 LMWSATWPKEVQALAKDLCKEQPIQVN-VGSLTLTACRSIKQEIYLLEEHEKIGNLKSLL 353

Query:    60 T-VYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHGDISQHQRERTLNGFRQGKFTV 117
               ++    + IVF +TK++AD ++ AL    + +  +HGD  Q +R   LN F+ GK  +
Sbjct:   354 QRIFKDNDRIIVFVETKKNADFITKALRLDGMPALCIHGDKKQEERRWVLNEFKTGKSPI 413

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             ++ATDVA+RGLDI NV  +I+++ PN  E +VHR GRTGRAG  G +    T+ + R  +
Sbjct:   414 MIATDVASRGLDIKNVKYVINFDFPNQIEDYVHRIGRTGRAGSHGASFTFLTADKYRLAK 473

Query:   178 SLERDVGCKFEFVSPPVVEDV 198
              L + +  + E   PP +E +
Sbjct:   474 DLVKILR-ESEQPVPPQLEKI 493


>UNIPROTKB|Q8IL13 [details] [associations]
            symbol:PF14_0437 "Helicase, putative" species:36329
            "Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
            ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
            PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
            KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
            HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
        Length = 527

 Score = 278 (102.9 bits), Expect = 3.5e-23, P = 3.5e-23
 Identities = 67/201 (33%), Positives = 110/201 (54%)

Query:     1 MLFSATMPSWVKKLSRKYL-DNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLI 59
             +++SAT P  V+ L++    + P+ ++ VG+        IK          K   L  L+
Sbjct:   295 LMWSATWPKEVQALAKDLCKEQPIQVN-VGSLTLTACRSIKQEIYLLEEHEKIGNLKSLL 353

Query:    60 T-VYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHGDISQHQRERTLNGFRQGKFTV 117
               ++    + IVF +TK++AD ++ AL    + +  +HGD  Q +R   LN F+ GK  +
Sbjct:   354 QRIFKDNDRIIVFVETKKNADFITKALRLDGMPALCIHGDKKQEERRWVLNEFKTGKSPI 413

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             ++ATDVA+RGLDI NV  +I+++ PN  E +VHR GRTGRAG  G +    T+ + R  +
Sbjct:   414 MIATDVASRGLDIKNVKYVINFDFPNQIEDYVHRIGRTGRAGSHGASFTFLTADKYRLAK 473

Query:   178 SLERDVGCKFEFVSPPVVEDV 198
              L + +  + E   PP +E +
Sbjct:   474 DLVKILR-ESEQPVPPQLEKI 493


>DICTYBASE|DDB_G0269146 [details] [associations]
            symbol:ifdA "eukaryotic translation initiation factor
            4A" species:44689 "Dictyostelium discoideum" [GO:0045335
            "phagocytic vesicle" evidence=IDA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0044351 "macropinocytosis"
            evidence=RCA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0269146
            GO:GO:0005524 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
            GO:GO:0045335 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HSSP:P10081 KO:K03257 OMA:AVINYHI EMBL:U78759
            RefSeq:XP_645917.1 ProteinModelPortal:P90529 STRING:P90529
            PRIDE:P90529 EnsemblProtists:DDB0191262 GeneID:8616858
            KEGG:ddi:DDB_G0269146 InParanoid:P90529 Uniprot:P90529
        Length = 395

 Score = 274 (101.5 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 63/182 (34%), Positives = 104/182 (57%)

Query:     2 LFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAIST-TATSKRTILSDLIT 60
             LFSATM      ++ K++ NP++I LV  +DE   EGI+ + ++      K  +L+DL  
Sbjct:   202 LFSATMTDETLGITSKFMQNPVSI-LV-KKDELTLEGIRQFYVNVGVEQGKFEVLTDLYE 259

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
               +   ++++F  T+R  D ++  +T       + HGD  Q  R+  L  FR G   VL+
Sbjct:   260 TLSIT-QSVIFCNTRRKVDWLTSKMTEQKFTVSSTHGD--QKDRDGILQAFRSGATRVLI 316

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
              TD+ ARG+D+  V L+I+++LP + E ++HR GR+GR G++G AI   T ++R  +  L
Sbjct:   317 TTDLLARGIDVQQVSLVINFDLPTNIENYIHRIGRSGRFGRKGVAINFITDAERGQIDEL 376

Query:   180 ER 181
              R
Sbjct:   377 SR 378


>MGI|MGI:1915005 [details] [associations]
            symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 47"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0006915 "apoptotic
            process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915005
            GO:GO:0005524 GO:GO:0006915 GO:GO:0005730 GO:GO:0008380
            GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268802
            GeneTree:ENSGT00670000098028 CTD:51202 HOVERGEN:HBG100512 KO:K14777
            OMA:IFIPSKF OrthoDB:EOG4TXBRS ChiTaRS:DDX47 EMBL:AK010310
            EMBL:AK076982 IPI:IPI00187240 RefSeq:NP_080636.2 UniGene:Mm.166524
            ProteinModelPortal:Q9CWX9 SMR:Q9CWX9 IntAct:Q9CWX9
            PhosphoSite:Q9CWX9 PaxDb:Q9CWX9 PRIDE:Q9CWX9
            Ensembl:ENSMUST00000032326 GeneID:67755 KEGG:mmu:67755
            InParanoid:Q9CWX9 NextBio:325481 Bgee:Q9CWX9 CleanEx:MM_DDX47
            Genevestigator:Q9CWX9 GermOnline:ENSMUSG00000030204 Uniprot:Q9CWX9
        Length = 455

 Score = 276 (102.2 bits), Expect = 5.0e-23, P = 5.0e-23
 Identities = 67/199 (33%), Positives = 110/199 (55%)

Query:     2 LFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITV 61
             LFSATM   V+KL R  L NP+   +  +   +  E ++ Y +   +  K T L  ++  
Sbjct:   203 LFSATMTKKVQKLQRAALKNPVKCAV--SSKYQTVEKLQQYYLFIPSKFKDTYLVYILNE 260

Query:    62 YAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVA 120
              A G   ++F  T  +    +L L ++   +  LHG +SQ +R  +LN F+    ++L+A
Sbjct:   261 LA-GNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLA 319

Query:   121 TDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 180
             TDVA+RGLDIP+VD+++++++P   + ++HR GRT RAG+ G AI   T       + +E
Sbjct:   320 TDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIE 379

Query:   181 RDVGCKFEFVSPPVVEDVL 199
               +G K   V P   E+V+
Sbjct:   380 HLIGKKLP-VFPTQDEEVM 397


>UNIPROTKB|G3V727 [details] [associations]
            symbol:Ddx47 "Protein Ddx47" species:10116 "Rattus
            norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
            [GO:0006915 "apoptotic process" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
            splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 EMBL:CH473964
            GeneTree:ENSGT00670000098028 CTD:51202 KO:K14777 OMA:IFIPSKF
            RefSeq:NP_001015005.2 UniGene:Rn.73790 Ensembl:ENSRNOT00000011096
            GeneID:297685 KEGG:rno:297685 RGD:1310437 NextBio:642541
            Uniprot:G3V727
        Length = 455

 Score = 276 (102.2 bits), Expect = 5.0e-23, P = 5.0e-23
 Identities = 67/199 (33%), Positives = 110/199 (55%)

Query:     2 LFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITV 61
             LFSATM   V+KL R  L NP+   +  +   +  E ++ Y +   +  K T L  ++  
Sbjct:   203 LFSATMTKKVQKLQRAALKNPVKCAV--SSKYQTVEKLQQYYLFIPSKFKDTYLVYILNE 260

Query:    62 YAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVA 120
              A G   ++F  T  +    +L L ++   +  LHG +SQ +R  +LN F+    ++L+A
Sbjct:   261 LA-GNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLA 319

Query:   121 TDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 180
             TDVA+RGLDIP+VD+++++++P   + ++HR GRT RAG+ G AI   T       + +E
Sbjct:   320 TDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIE 379

Query:   181 RDVGCKFEFVSPPVVEDVL 199
               +G K   V P   E+V+
Sbjct:   380 HLIGKKLP-VFPTQDEEVM 397


>FB|FBgn0037549 [details] [associations]
            symbol:CG7878 species:7227 "Drosophila melanogaster"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0004386 "helicase activity" evidence=ISS] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
            InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
            SMART:SM00322 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
            GO:GO:0006200 GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
            HSSP:P10081 OMA:VLDITHV EMBL:AY051831 RefSeq:NP_649767.1
            UniGene:Dm.1098 SMR:Q7K4L8 IntAct:Q7K4L8 EnsemblMetazoa:FBtr0113205
            GeneID:40959 KEGG:dme:Dmel_CG7878 UCSC:CG7878-RA
            FlyBase:FBgn0037549 InParanoid:Q7K4L8 OrthoDB:EOG47D7XG
            GenomeRNAi:40959 NextBio:20818674 Uniprot:Q7K4L8
        Length = 703

 Score = 278 (102.9 bits), Expect = 7.5e-23, P = 7.5e-23
 Identities = 60/171 (35%), Positives = 100/171 (58%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIK-LYAISTTATSKRTILSDLI 59
             ++ SAT P  V++L++ Y+ NP+ +  VG+ D      +K +  +      K   ++  +
Sbjct:   465 IMTSATWPPGVRRLAQSYMKNPIQV-CVGSLDLAATHSVKQIIKLMEDDMDKFNTITSFV 523

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHGDISQHQRERTLNGFRQGKFTVL 118
                +   K I+F   K  AD++S  LT     ++ +HG+  Q  RE+ +   + G   +L
Sbjct:   524 KNMSSTDKIIIFCGRKVRADDLSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVVRIL 583

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 169
             VATDVA+RGLDI ++  +I+Y+ P++ E +VHR GRTGRAG++GT+I  FT
Sbjct:   584 VATDVASRGLDIEDITHVINYDFPHNIEEYVHRVGRTGRAGRQGTSISFFT 634


>UNIPROTKB|I3LIB1 [details] [associations]
            symbol:LOC100625841 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] InterPro:IPR001650 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            GO:GO:0004386 GeneTree:ENSGT00550000074997 EMBL:CU407277
            Ensembl:ENSSSCT00000025578 OMA:VIAHYRE Uniprot:I3LIB1
        Length = 442

 Score = 275 (101.9 bits), Expect = 7.7e-23, P = 7.7e-23
 Identities = 82/248 (33%), Positives = 122/248 (49%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             MLFSATM   VK L+   L NP+ I +  N D       +   I       R  +   + 
Sbjct:    45 MLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALL 104

Query:    61 VYAKGGKTIVFTQTKRDADE--VSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVL 118
             +       ++FTQTK+ A    + L L  +   E LHG++SQ QR   L  F+  +  +L
Sbjct:   105 MRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGE-LHGNLSQTQRLEALRRFKDEQIDIL 163

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             VATDVAARGLDI  V  +I++ +PN  + +VHR GRT RAG+ G ++ +    +R+ ++ 
Sbjct:   164 VATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKE 223

Query:   179 LERDVGC--KFEFVSPPVV---EDVLESSAEQVVATLNGVHPESVEFFTP-----TAQRL 228
             + +      K   +   V+    D +E   + V A L  +  E  E         TAQRL
Sbjct:   224 IVKAAKAPVKARILPQDVILKFRDKIEKMEKDVYAVLQ-LEAEEKEMQKSEAQINTAQRL 282

Query:   229 IEEKGTDA 236
             +E KG +A
Sbjct:   283 LE-KGKEA 289


>ZFIN|ZDB-GENE-080204-77 [details] [associations]
            symbol:ddx43 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
            43" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            ZFIN:ZDB-GENE-080204-77 GO:GO:0005524 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
            GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ
            EMBL:BX890626 EMBL:CR354610 IPI:IPI00886666 UniGene:Dr.41756
            Ensembl:ENSDART00000101479 OMA:IDITSIT Uniprot:B8A609
        Length = 719

 Score = 278 (102.9 bits), Expect = 7.9e-23, P = 7.9e-23
 Identities = 62/181 (34%), Positives = 99/181 (54%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             ++ SAT P  V++L++ YL +P+ +  VG  D      ++   +      K+  + D I 
Sbjct:   460 VMTSATWPPGVRRLAKSYLKDPMMV-YVGTLDLAAVNTVQQTVLFVQEDEKKDYVFDFIH 518

Query:    61 VYAKGGKTIVFTQTKRDADEVS--LALTSIIASEALHGDISQHQRERTLNGFRQGKFTVL 118
                   K ++F   K  AD++S  L L  I A ++LHGD  Q  RE  L  F+ G+  +L
Sbjct:   519 RMEPLDKVLIFVGKKLKADDLSSDLCLQGI-AVQSLHGDREQCDREEALQDFKDGRVRIL 577

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             VATD+A+RGLD+ ++  + +Y+ P + E +VHR GRTGRAG+ G ++ + T    R    
Sbjct:   578 VATDLASRGLDVHDITHVFNYDFPRNVEEYVHRVGRTGRAGRSGESVTLVTREDWRVAAE 637

Query:   179 L 179
             L
Sbjct:   638 L 638


>UNIPROTKB|A4QSS5 [details] [associations]
            symbol:DBP2 "ATP-dependent RNA helicase DBP2"
            species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
            development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
            GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
            ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
            KEGG:mgr:MGG_16901 Uniprot:A4QSS5
        Length = 548

 Score = 276 (102.2 bits), Expect = 1.1e-22, P = 1.1e-22
 Identities = 61/184 (33%), Positives = 108/184 (58%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIK--LYAISTTATSKRTI--LS 56
             +++SAT P  V+ ++  +L + + ++ +G+ D      I   +  +S +    R I  + 
Sbjct:   307 LMWSATWPKEVRNMAADFLQDFIQVN-IGSLDLSANHRITQIVEVVSESEKRDRMIRHME 365

Query:    57 DLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKF 115
              ++       K ++F  TKR ADE++  L      + ++HGD  Q++R+  L+ F+ GK 
Sbjct:   366 KVMDGKDSKNKILIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKS 425

Query:   116 TVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRT 175
              ++VATDVA+RG+D+ N+  +++Y+ PN+ E ++HR GRTGRAG +GTAI  FT+   + 
Sbjct:   426 PIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTENSKQ 485

Query:   176 VRSL 179
              R L
Sbjct:   486 ARDL 489


>WB|WBGene00010260 [details] [associations]
            symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
            growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
            GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
            GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
            RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
            STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
            EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
            EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
            KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
            WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
            ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
        Length = 561

 Score = 276 (102.2 bits), Expect = 1.2e-22, P = 1.2e-22
 Identities = 64/182 (35%), Positives = 105/182 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             ++FSAT P  V+ L+  +  +   ++ VG+ +      I          +K+  L +L+ 
Sbjct:   311 LMFSATWPKEVRALASDFQKDAAFLN-VGSLELAANHNITQVVDILEEHAKQAKLMELLN 369

Query:    61 --VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
               +  K  KTI+F +TKR ADE++ A+      +  +HGD +Q +R+  L  F+ GK  +
Sbjct:   370 HIMNQKECKTIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVLQEFKAGKTPI 429

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             ++ATDVAARGLD+ ++  +I+Y+ PN+ E +VHR GRTGR+ K+GTA   FT +     +
Sbjct:   430 MLATDVAARGLDVDDIKFVINYDYPNNSEDYVHRIGRTGRSDKKGTAYTFFTHTNASKAK 489

Query:   178 SL 179
              L
Sbjct:   490 DL 491


>MGI|MGI:102670 [details] [associations]
            symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=ISO;IDA] [GO:0007141 "male meiosis I" evidence=IMP]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0030317 "sperm motility"
            evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
            [GO:0032880 "regulation of protein localization" evidence=IMP]
            [GO:0033391 "chromatoid body" evidence=ISO;IDA] [GO:0044464 "cell
            part" evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IDA] [GO:0071546 "pi-body" evidence=IDA] [GO:0071547
            "piP-body" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:102670 GO:GO:0007275
            GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0032880
            GO:GO:0007283 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
            HOVERGEN:HBG015893 CTD:54514 KO:K13982 GO:GO:0071547 GO:GO:0000237
            EMBL:AK014844 EMBL:D14859 IPI:IPI00121394 RefSeq:NP_034159.1
            UniGene:Mm.12818 ProteinModelPortal:Q61496 SMR:Q61496 STRING:Q61496
            PhosphoSite:Q61496 REPRODUCTION-2DPAGE:IPI00121394
            REPRODUCTION-2DPAGE:Q61496 PaxDb:Q61496 PRIDE:Q61496
            Ensembl:ENSMUST00000075748 GeneID:13206 KEGG:mmu:13206
            UCSC:uc007rwm.2 ChiTaRS:DDX4 NextBio:283368 Bgee:Q61496
            CleanEx:MM_DDX4 Genevestigator:Q61496 GermOnline:ENSMUSG00000021758
            Uniprot:Q61496
        Length = 702

 Score = 277 (102.6 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 69/181 (38%), Positives = 102/181 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSAT P  +++L+  +L +      VG Q       ++   +     SKR  L +++ 
Sbjct:   451 LLFSATFPEEIQRLAGDFLKSSYLFVAVG-QVGGACRDVQQTILQVGQYSKREKLVEILR 509

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                   +T+VF +TK+ AD ++  L    I++ ++HGD  Q +RE+ L  FR GK  VLV
Sbjct:   510 NIGDE-RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLV 568

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMF-TSSQRRTVRS 178
             AT VAARGLDI NV  +I+++LP+  + +VHR GRTGR G  G AI  F T S     + 
Sbjct:   569 ATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDTDSDNHLAQP 628

Query:   179 L 179
             L
Sbjct:   629 L 629


>FB|FBgn0015331 [details] [associations]
            symbol:abs "abstrakt" species:7227 "Drosophila melanogaster"
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=NAS]
            [GO:0004386 "helicase activity" evidence=ISS] [GO:0030010
            "establishment of cell polarity" evidence=NAS] [GO:0007399 "nervous
            system development" evidence=NAS] [GO:0005634 "nucleus"
            evidence=NAS] [GO:0009653 "anatomical structure morphogenesis"
            evidence=NAS] [GO:0006915 "apoptotic process" evidence=NAS]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
            PROSITE:PS51194 SMART:SM00343 SMART:SM00490 EMBL:AE014297
            GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
            GO:GO:0004386 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 KO:K13116 EMBL:AF212866 EMBL:AF187729
            EMBL:AY051752 RefSeq:NP_524220.1 UniGene:Dm.3300
            ProteinModelPortal:Q9V3C0 SMR:Q9V3C0 DIP:DIP-21861N IntAct:Q9V3C0
            MINT:MINT-341079 STRING:Q9V3C0 PaxDb:Q9V3C0 PRIDE:Q9V3C0
            EnsemblMetazoa:FBtr0078967 GeneID:40530 KEGG:dme:Dmel_CG14637
            UCSC:CG14637-RA CTD:40530 FlyBase:FBgn0015331 InParanoid:Q9V3C0
            OMA:KDQEERS OrthoDB:EOG4KWH7Z PhylomeDB:Q9V3C0 GenomeRNAi:40530
            NextBio:819209 Bgee:Q9V3C0 GermOnline:CG14637 Uniprot:Q9V3C0
        Length = 619

 Score = 262 (97.3 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
 Identities = 61/179 (34%), Positives = 99/179 (55%)

Query:     1 MLFSATMPSWVKKLSRKYLDNP--LNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDL 58
             +LFSATMP  ++  +R  L  P  +N+   G     + + ++ Y       +K   L D 
Sbjct:   368 LLFSATMPKKIQNFARSALVKPVTINVGRAGAASMNVTQQVE-YV---KQEAKVVYLLDC 423

Query:    59 ITVYAKGGKTIVFTQTKRDADEV-SLALTSIIASEALHGDISQHQRERTLNGFRQGKFTV 117
             +   A     ++F + K+D D +    L   + + A+HG   Q +R R ++ +R GK  V
Sbjct:   424 LQKTAP--PVLIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQEERSRAVDAYRVGKKDV 481

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTV 176
             LVATDVA++GLD PNV  +I+Y++P+D E +VHR GRTGR+  +G A  +   +  ++V
Sbjct:   482 LVATDVASKGLDFPNVQHVINYDMPDDIENYVHRIGRTGRSNTKGLATTLINKTTEQSV 540

 Score = 56 (24.8 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
 Identities = 9/15 (60%), Positives = 10/15 (66%)

Query:   455 CFNCGKSGHRASECP 469
             C  CG  GHR +ECP
Sbjct:   579 CTYCGGLGHRITECP 593


>TAIR|locus:2034481 [details] [associations]
            symbol:STRS1 "STRESS RESPONSE SUPPRESSOR 1" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0001510
            "RNA methylation" evidence=RCA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005730
            EMBL:AC079041 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811
            OMA:DRILVFC EMBL:AC074309 EMBL:AY080680 EMBL:AY117298 EMBL:AJ010458
            IPI:IPI00547293 PIR:A86444 PIR:T51739 RefSeq:NP_174479.1
            UniGene:At.20258 ProteinModelPortal:Q9C551 SMR:Q9C551 STRING:Q9C551
            PaxDb:Q9C551 PRIDE:Q9C551 EnsemblPlants:AT1G31970.1 GeneID:840087
            KEGG:ath:AT1G31970 GeneFarm:911 TAIR:At1g31970 InParanoid:Q9C551
            PhylomeDB:Q9C551 ProtClustDB:CLSN2682598 Genevestigator:Q9C551
            GermOnline:AT1G31970 Uniprot:Q9C551
        Length = 537

 Score = 275 (101.9 bits), Expect = 1.8e-22, P = 1.8e-22
 Identities = 79/243 (32%), Positives = 130/243 (53%)

Query:     1 MLFSATMPSWVKKLSRKYLD-NPLNIDLVGNQDEKLAEGIK--LYAISTTATSKRTILSD 57
             ++FSAT P  V KL+++++D NP+ + ++G+ D      +   +  +   A  +R I   
Sbjct:   300 VMFSATWPLDVHKLAQEFMDPNPIKV-IIGSVDLAANHDVMQIIEVLDERARDQRLIA-- 356

Query:    58 LITVYAKGGKT--IVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGK 114
             L+  Y K  K   +VF   K +A+ +   L      + ++HG+ +Q +R R+L+ F++G 
Sbjct:   357 LLEKYHKSQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGS 416

Query:   115 FTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRR 174
               +LVATDVAARGLDIP+V+++I+Y  P   E +VHR GRTGRAGK+G A   FT   + 
Sbjct:   417 CPLLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFTPLNKG 476

Query:   175 TVRSLERDVGCKFEFVSPPVVEDVLE--SSAEQVVATLNGVHPESVEFFTPTAQRLIEEK 232
                 L   V    E     V  D+L+  +  ++  + L G H + +    P A ++  + 
Sbjct:   477 LAGEL---VNVLRE-AGQVVPADLLKFGTHVKKKESKLYGAHFKEIAADAPKATKITFDN 532

Query:   233 GTD 235
               D
Sbjct:   533 SDD 535


>UNIPROTKB|Q9H0S4 [details] [associations]
            symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0006915 "apoptotic process" evidence=IDA]
            [GO:0008380 "RNA splicing" evidence=IMP] [GO:0006364 "rRNA
            processing" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
            GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 GO:GO:0003723
            EMBL:CH471094 UniGene:Hs.719938 GermOnline:ENSG00000178878
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268802 CTD:51202 HOVERGEN:HBG100512 KO:K14777
            OMA:IFIPSKF EMBL:AF078843 EMBL:AL136666 EMBL:AK054574 EMBL:AK127712
            EMBL:AC007215 EMBL:BC009379 EMBL:BC068009 IPI:IPI00023972
            IPI:IPI00397372 RefSeq:NP_057439.2 RefSeq:NP_957518.1 PDB:3BER
            PDBsum:3BER ProteinModelPortal:Q9H0S4 SMR:Q9H0S4 IntAct:Q9H0S4
            MINT:MINT-3056694 STRING:Q9H0S4 PhosphoSite:Q9H0S4 DMDM:52782792
            SWISS-2DPAGE:Q9H0S4 PaxDb:Q9H0S4 PRIDE:Q9H0S4 DNASU:51202
            Ensembl:ENST00000352940 Ensembl:ENST00000358007 GeneID:51202
            KEGG:hsa:51202 UCSC:uc001rav.3 GeneCards:GC12P012966
            HGNC:HGNC:18682 HPA:HPA014855 neXtProt:NX_Q9H0S4
            PharmGKB:PA134918403 InParanoid:Q9H0S4 PhylomeDB:Q9H0S4
            ChiTaRS:DDX47 EvolutionaryTrace:Q9H0S4 GenomeRNAi:51202
            NextBio:54238 ArrayExpress:Q9H0S4 Bgee:Q9H0S4 CleanEx:HS_DDX47
            Genevestigator:Q9H0S4 Uniprot:Q9H0S4
        Length = 455

 Score = 273 (101.2 bits), Expect = 2.0e-22, P = 2.0e-22
 Identities = 68/206 (33%), Positives = 111/206 (53%)

Query:     2 LFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITV 61
             LFSATM   V+KL R  L NP+   +  +   +  E ++ Y I   +  K T L  ++  
Sbjct:   203 LFSATMTKKVQKLQRAALKNPVKCAV--SSKYQTVEKLQQYYIFIPSKFKDTYLVYILNE 260

Query:    62 YAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVA 120
              A G   ++F  T  +    +L L ++   +  LHG +SQ +R  +LN F+    ++L+A
Sbjct:   261 LA-GNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLA 319

Query:   121 TDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 180
             TDVA+RGLDIP+VD+++++++P   + ++HR GRT RAG+ G AI   T       + +E
Sbjct:   320 TDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIE 379

Query:   181 RDVGCKFEFVSPPVVEDVLESSAEQV 206
               +G K      P  +D +    E+V
Sbjct:   380 HLIGKKLPGF--PTQDDEVMMLTERV 403


>UNIPROTKB|Q29S22 [details] [associations]
            symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
            species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=ISS]
            [GO:0008380 "RNA splicing" evidence=ISS] [GO:0006915 "apoptotic
            process" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
            GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 EMBL:BC113207
            IPI:IPI00688068 RefSeq:NP_001039850.1 UniGene:Bt.23258
            ProteinModelPortal:Q29S22 SMR:Q29S22 PRIDE:Q29S22
            Ensembl:ENSBTAT00000003058 GeneID:534721 KEGG:bta:534721 CTD:51202
            HOVERGEN:HBG100512 InParanoid:Q29S22 KO:K14777 OMA:IFIPSKF
            OrthoDB:EOG4TXBRS NextBio:20876515 Uniprot:Q29S22
        Length = 457

 Score = 273 (101.2 bits), Expect = 2.0e-22, P = 2.0e-22
 Identities = 66/199 (33%), Positives = 110/199 (55%)

Query:     2 LFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITV 61
             LFSATM   V+KL R  L NP+   +  +   +  E ++ Y +   +  K T L  ++  
Sbjct:   205 LFSATMTKKVQKLQRAALKNPVKCAV--SSKYQTVEKLQQYYLFIPSKFKDTYLVYILNE 262

Query:    62 YAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVA 120
              A G   ++F  T  +    +L L ++   +  LHG +SQ +R  +LN F+    ++L+A
Sbjct:   263 LA-GNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLA 321

Query:   121 TDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 180
             TDVA+RGLDIP+VD+++++++P   + ++HR GRT RAG+ G AI   T       + +E
Sbjct:   322 TDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIE 381

Query:   181 RDVGCKFEFVSPPVVEDVL 199
               +G K   V P   ++V+
Sbjct:   382 HLIGKKLP-VFPTQDDEVM 399


>TIGR_CMR|CPS_3401 [details] [associations]
            symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
            STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
            OMA:HLIKEHQ ProtClustDB:CLSK907013
            BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
        Length = 432

 Score = 272 (100.8 bits), Expect = 2.3e-22, P = 2.3e-22
 Identities = 61/167 (36%), Positives = 97/167 (58%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSAT P  V  L+++ L+NP+ I L       L +  +++ ++     K  +L+ LI 
Sbjct:   196 LLFSATFPEQVTTLTQELLNNPIEIQLQSADASTLVQ--RVFTVNKG--EKTAVLAHLIQ 251

Query:    61 VYAKGGKTIVFTQTKRDADEVS--LALTSIIASEALHGDISQHQRERTLNGFRQGKFTVL 118
                +  + ++F   K   + ++  LA   I A+   HGD  Q +R R L+GF+ G   VL
Sbjct:   252 -QEQWRQALIFVNAKHHCEHLAEKLAKRGITAA-VFHGDKGQSERSRVLDGFKAGDIEVL 309

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAI 165
             +ATD+AARGLDI  + ++I++ LP  P  ++HR GR+GRAG+ G AI
Sbjct:   310 IATDIAARGLDIEKLPVVINFNLPRSPSDYMHRIGRSGRAGEVGLAI 356


>TAIR|locus:2176192 [details] [associations]
            symbol:AT5G51280 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0000741 "karyogamy"
            evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
            evidence=RCA] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
            GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
            GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:AB023044 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K13116
            OMA:DICRYLC HOGENOM:HOG000268792 EMBL:AK226380 IPI:IPI00530020
            RefSeq:NP_199941.1 UniGene:At.29686 ProteinModelPortal:Q9LU46
            SMR:Q9LU46 PaxDb:Q9LU46 PRIDE:Q9LU46 DNASU:835202
            EnsemblPlants:AT5G51280.1 GeneID:835202 KEGG:ath:AT5G51280
            GeneFarm:1011 TAIR:At5g51280 InParanoid:Q9LU46 PhylomeDB:Q9LU46
            ProtClustDB:CLSN2685494 Genevestigator:Q9LU46 GermOnline:AT5G51280
            Uniprot:Q9LU46
        Length = 591

 Score = 264 (98.0 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
 Identities = 66/215 (30%), Positives = 112/215 (52%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSATMP+ ++  +R  L  P+ ++ VG      A  + +         +  I+  L  
Sbjct:   337 LLFSATMPTKIQIFARSALVKPVTVN-VGRAG---AANLDVIQEVEYVKQEAKIVYLLEC 392

Query:    61 VYAKGGKTIVFTQTKRDADEV-SLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLV 119
             +       ++F + K D D++    L   + + A+HG   Q  RE  ++ F+ GK  VLV
Sbjct:   393 LQKTSPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDREYAISSFKAGKKDVLV 452

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVA++GLD P++  +I+Y++P + E +VHR GRTGR GK G A      +Q  T    
Sbjct:   453 ATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLD 512

Query:   180 ERDVGCKFEFVSPPVVEDVLESSAE-QVVATLNGV 213
              + +  + +   PPV+ ++ +   E + +A  +GV
Sbjct:   513 LKHLLQEAKQRIPPVLAELNDPMEEAETIANASGV 547

 Score = 51 (23.0 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
 Identities = 8/15 (53%), Positives = 9/15 (60%)

Query:   455 CFNCGKSGHRASECP 469
             C  CG  GHR  +CP
Sbjct:   550 CAYCGGLGHRIRDCP 564


>UNIPROTKB|F1Q073 [details] [associations]
            symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00550000074997 EMBL:AAEX03013992
            Ensembl:ENSCAFT00000018089 Uniprot:F1Q073
        Length = 767

 Score = 276 (102.2 bits), Expect = 2.5e-22, P = 2.5e-22
 Identities = 85/250 (34%), Positives = 126/250 (50%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKR-TILSDLI 59
             MLFSATM   VK L+   L NP+ I +  N D       +   I       R  I++ L+
Sbjct:   368 MLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFVRIRPNREGDREAIVAALL 427

Query:    60 TVYAKGGKTIVFTQTKRDADE--VSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTV 117
             T        ++FTQTK+ A    + L L  +   E LHG++SQ QR   L  F+  +  +
Sbjct:   428 T-RTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGE-LHGNLSQTQRLEALRRFKDEQIDI 485

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             LVATDVAARGLDI  V  +I++ +PN  + +VHR GRT RAG+ G ++ +    +R+ ++
Sbjct:   486 LVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEEERKMLK 545

Query:   178 SLERDVGC--KFEFVSPPVV---EDVLESSAEQVVATLNGVHPESVEFFTP-----TAQR 227
              + +      K   +   V+    D +E   + V A L  +  E  E         TA+R
Sbjct:   546 EIVKAAKAPVKARILPQDVILKFRDKIEKMEKDVYAVLQ-LEAEEKELQQSEAQINTAKR 604

Query:   228 LIE-EKGTDA 236
             L+E EKG +A
Sbjct:   605 LLEREKGKEA 614


>UNIPROTKB|J9P9C6 [details] [associations]
            symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00550000074997 OMA:TRTFTDH EMBL:AAEX03013992
            Ensembl:ENSCAFT00000046251 Uniprot:J9P9C6
        Length = 788

 Score = 276 (102.2 bits), Expect = 2.6e-22, P = 2.6e-22
 Identities = 85/250 (34%), Positives = 126/250 (50%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKR-TILSDLI 59
             MLFSATM   VK L+   L NP+ I +  N D       +   I       R  I++ L+
Sbjct:   389 MLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFVRIRPNREGDREAIVAALL 448

Query:    60 TVYAKGGKTIVFTQTKRDADE--VSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTV 117
             T        ++FTQTK+ A    + L L  +   E LHG++SQ QR   L  F+  +  +
Sbjct:   449 T-RTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGE-LHGNLSQTQRLEALRRFKDEQIDI 506

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             LVATDVAARGLDI  V  +I++ +PN  + +VHR GRT RAG+ G ++ +    +R+ ++
Sbjct:   507 LVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEEERKMLK 566

Query:   178 SLERDVGC--KFEFVSPPVV---EDVLESSAEQVVATLNGVHPESVEFFTP-----TAQR 227
              + +      K   +   V+    D +E   + V A L  +  E  E         TA+R
Sbjct:   567 EIVKAAKAPVKARILPQDVILKFRDKIEKMEKDVYAVLQ-LEAEEKELQQSEAQINTAKR 625

Query:   228 LIE-EKGTDA 236
             L+E EKG +A
Sbjct:   626 LLEREKGKEA 635


>UNIPROTKB|E2RN03 [details] [associations]
            symbol:DDX47 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
            [GO:0006915 "apoptotic process" evidence=IEA] [GO:0006364 "rRNA
            processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
            GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
            OMA:IFIPSKF EMBL:AAEX03015248 Ensembl:ENSCAFT00000020996
            NextBio:20853120 Uniprot:E2RN03
        Length = 482

 Score = 273 (101.2 bits), Expect = 2.6e-22, P = 2.6e-22
 Identities = 66/199 (33%), Positives = 110/199 (55%)

Query:     2 LFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITV 61
             LFSATM   V+KL R  L NP+   +  +   +  E ++ Y +   +  K T L  ++  
Sbjct:   229 LFSATMTKKVQKLQRAALKNPVKCAV--SSKYQTVEKLQQYYLFIPSKFKDTYLVYILNE 286

Query:    62 YAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVA 120
              A G   ++F  T  +    +L L ++   +  LHG +SQ +R  +LN F+    ++L+A
Sbjct:   287 LA-GNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLA 345

Query:   121 TDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 180
             TDVA+RGLDIP+VD+++++++P   + ++HR GRT RAG+ G AI   T       + +E
Sbjct:   346 TDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIE 405

Query:   181 RDVGCKFEFVSPPVVEDVL 199
               +G K   V P   ++V+
Sbjct:   406 HLIGKKLP-VFPTQDDEVM 423


>UNIPROTKB|B4DLW8 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003712 "transcription cofactor activity"
            evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AC009994 GO:GO:0003724 HOVERGEN:HBG015893 UniGene:Hs.279806
            HGNC:HGNC:2746 ChiTaRS:DDX5 EMBL:AK297192 IPI:IPI00798375
            STRING:B4DLW8 Ensembl:ENST00000450599 UCSC:uc010wqa.1
            Uniprot:B4DLW8
        Length = 535

 Score = 274 (101.5 bits), Expect = 2.7e-22, P = 2.7e-22
 Identities = 62/182 (34%), Positives = 105/182 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGI-KLYAISTTATSKRTILSDLI 59
             +++SAT P  V++L+  +L + ++I+ +G  +      I ++  +         ++  + 
Sbjct:   197 LMWSATWPKEVRQLAEDFLKDYIHIN-IGALELSANHNILQIVDVCHDVEKDEKLIRLME 255

Query:    60 TVYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
              + + K  KTIVF +TKR  DE++  +      +  +HGD SQ +R+  LN F+ GK  +
Sbjct:   256 EIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPI 315

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             L+ATDVA+RGLD+ +V  +I+Y+ PN  E ++HR GRT R+ K GTA   FT +  + V 
Sbjct:   316 LIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVS 375

Query:   178 SL 179
              L
Sbjct:   376 DL 377


>UNIPROTKB|Q0C4B9 [details] [associations]
            symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
            species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
            GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
            RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
            GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
            BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
        Length = 536

 Score = 274 (101.5 bits), Expect = 2.7e-22, P = 2.7e-22
 Identities = 72/207 (34%), Positives = 118/207 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAI---STTATSKRTILSD 57
             +LFSAT P+ +++L++ +  +P  I++   +  + AE I  + +   +    ++RT L  
Sbjct:   184 LLFSATFPTDIQRLAKTFQKDPKKIEVT--RPAQTAETISQFVVKLPTNDGKARRTALRR 241

Query:    58 LI-TVYAKGGKTIVFTQTKRDADEVSLALTSIIASEA-LHGDISQHQRERTLNGFRQGKF 115
             +I     K G  IVF   K + D V+ +LT      A +HGD+ Q  R  TL  FR GK 
Sbjct:   242 VIEATNVKNG--IVFCNRKVEVDIVAASLTKHGHDAAPIHGDLPQSVRSETLQRFRDGKL 299

Query:   116 TVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRT 175
              +LVA+DVAARGLDIP+V  + ++  P   E +VHR GRTGRAG+ G +  + T +  ++
Sbjct:   300 KLLVASDVAARGLDIPDVGHVFNFGPPPKDEDYVHRIGRTGRAGRTGESYTVVTPADDKS 359

Query:   176 ----VRSLERDVGCKFEFVSPPVVEDV 198
                 V+ +++DV    EF+   ++E++
Sbjct:   360 WGFVVKMIKKDVP---EFMPEGLLEEL 383


>ZFIN|ZDB-GENE-030131-18 [details] [associations]
            symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
            species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
            KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
            UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
            KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
            Uniprot:F1QBS1
        Length = 671

 Score = 275 (101.9 bits), Expect = 3.3e-22, P = 3.3e-22
 Identities = 67/199 (33%), Positives = 109/199 (54%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +++SAT P  V++L+  +L + + I+ +G  +      I           K   L  L+ 
Sbjct:   277 LMWSATWPKEVRQLAEDFLQDYVQIN-IGALELSANHNILQIVDVCMENEKDNKLIQLME 335

Query:    61 -VYA-KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTV 117
              + A K  KTI+F +TK+  DE++  +      +  +HGD SQ +R+  L  FR GK  +
Sbjct:   336 EIMAEKENKTIIFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPI 395

Query:   118 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVR 177
             L+ATDVA+RGLD+ +V  +I+Y+ PN  E +VHR GRT R+  +GTA   FT    R  R
Sbjct:   396 LIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQAR 455

Query:   178 SLERDVGCKFEFVSPPVVE 196
              L R +    + ++P +++
Sbjct:   456 DLVRVLEEARQAINPKLLQ 474


>MGI|MGI:1919297 [details] [associations]
            symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
            evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919297
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
            GO:GO:0016607 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 EMBL:AL604045 HSSP:P09052
            CTD:11325 HOGENOM:HOG000268793 HOVERGEN:HBG081425 KO:K12835
            OrthoDB:EOG47WNN9 OMA:QGVNNTA ChiTaRS:DDX42 EMBL:AK007805
            EMBL:AK049311 EMBL:AK169816 EMBL:AK171730 EMBL:BC043036
            IPI:IPI00329839 IPI:IPI00830514 RefSeq:NP_082350.3 UniGene:Mm.41367
            ProteinModelPortal:Q810A7 SMR:Q810A7 IntAct:Q810A7 STRING:Q810A7
            PhosphoSite:Q810A7 PaxDb:Q810A7 PRIDE:Q810A7
            Ensembl:ENSMUST00000021046 GeneID:72047 KEGG:mmu:72047
            UCSC:uc007lyk.2 UCSC:uc007lyl.2 GeneTree:ENSGT00610000086076
            InParanoid:Q810A7 NextBio:335308 Bgee:Q810A7 CleanEx:MM_DDX42
            Genevestigator:Q810A7 Uniprot:Q810A7
        Length = 929

 Score = 276 (102.2 bits), Expect = 3.5e-22, P = 3.5e-22
 Identities = 64/203 (31%), Positives = 114/203 (56%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             +LFSAT    ++KL+R  L +P+ + + G+  E   +  ++  I  +  SK   L+  + 
Sbjct:   435 LLFSATFRKKIEKLARDILIDPIRV-VQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLV 493

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSIIASEAL-HGDISQHQRERTLNGFRQGKFTVLV 119
              +   G  ++F   K +A+E++  L     +  L HGD+ Q +R + ++ F++    VLV
Sbjct:   494 EFTSSGSVLLFVTKKANAEELASNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLV 553

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 179
             ATDVAARGLDIP++  +I+Y++  D +T  HR GRTGRAG++G A  + T         L
Sbjct:   554 ATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDL 613

Query:   180 ERDVGCKFEFVSPPVVEDVLESS 202
              R++    + VS  +++  ++++
Sbjct:   614 VRNLEGANQHVSKELLDLAMQNA 636


>GENEDB_PFALCIPARUM|PFD1070w [details] [associations]
            symbol:PFD1070w "eukaryotic initiation factor,
            putative" species:5833 "Plasmodium falciparum" [GO:0016281
            "eukaryotic translation initiation factor 4F complex" evidence=ISS]
            [GO:0003743 "translation initiation factor activity" evidence=ISS]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0006446 "regulation of translational initiation" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0006446 GO:GO:0016281
            GO:GO:0003743 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025
            OMA:EDWKFDT RefSeq:XP_001351530.1 ProteinModelPortal:Q8IFN9
            SMR:Q8IFN9 EnsemblProtists:PFD1070w:mRNA GeneID:812458
            KEGG:pfa:PFD1070w EuPathDB:PlasmoDB:PF3D7_0422700
            ProtClustDB:CLSZ2436055 Uniprot:Q8IFN9
        Length = 390

 Score = 268 (99.4 bits), Expect = 3.7e-22, P = 3.7e-22
 Identities = 64/183 (34%), Positives = 105/183 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SAT+P  V +++ K++  P+ I LV  +DE   EGIK + +S      K   L+DL 
Sbjct:   194 ILSSATLPQEVLEITNKFMHKPVKI-LV-KRDELTLEGIKQFFVSIEKEQWKYETLADLY 251

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLA-LTSIIASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + +VF  T+   D ++   L S      +H  +SQ +R+  +  FRQ KF VL
Sbjct:   252 ESLTIT-QAVVFCNTQMKVDWLTKKMLESNFTVCKMHAGMSQSERDDIMLKFRQCKFRVL 310

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             ++TD+  RGLD+  V L+++Y+LPN  E+++HR GR+GR G++G AI    +   + +R 
Sbjct:   311 ISTDIWGRGLDVQEVSLVVNYDLPNSRESYIHRIGRSGRFGRKGVAINFVKNDDIKILRD 370

Query:   179 LER 181
             +E+
Sbjct:   371 IEQ 373


>UNIPROTKB|Q8IFN9 [details] [associations]
            symbol:PFD1070w "Eukaryotic initiation factor, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0003743 "translation
            initiation factor activity" evidence=ISS] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006446
            "regulation of translational initiation" evidence=ISS] [GO:0016281
            "eukaryotic translation initiation factor 4F complex" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0006446 GO:GO:0016281
            GO:GO:0003743 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025
            OMA:EDWKFDT RefSeq:XP_001351530.1 ProteinModelPortal:Q8IFN9
            SMR:Q8IFN9 EnsemblProtists:PFD1070w:mRNA GeneID:812458
            KEGG:pfa:PFD1070w EuPathDB:PlasmoDB:PF3D7_0422700
            ProtClustDB:CLSZ2436055 Uniprot:Q8IFN9
        Length = 390

 Score = 268 (99.4 bits), Expect = 3.7e-22, P = 3.7e-22
 Identities = 64/183 (34%), Positives = 105/183 (57%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS-KRTILSDLI 59
             +L SAT+P  V +++ K++  P+ I LV  +DE   EGIK + +S      K   L+DL 
Sbjct:   194 ILSSATLPQEVLEITNKFMHKPVKI-LV-KRDELTLEGIKQFFVSIEKEQWKYETLADLY 251

Query:    60 TVYAKGGKTIVFTQTKRDADEVSLA-LTSIIASEALHGDISQHQRERTLNGFRQGKFTVL 118
                    + +VF  T+   D ++   L S      +H  +SQ +R+  +  FRQ KF VL
Sbjct:   252 ESLTIT-QAVVFCNTQMKVDWLTKKMLESNFTVCKMHAGMSQSERDDIMLKFRQCKFRVL 310

Query:   119 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRS 178
             ++TD+  RGLD+  V L+++Y+LPN  E+++HR GR+GR G++G AI    +   + +R 
Sbjct:   311 ISTDIWGRGLDVQEVSLVVNYDLPNSRESYIHRIGRSGRFGRKGVAINFVKNDDIKILRD 370

Query:   179 LER 181
             +E+
Sbjct:   371 IEQ 373


>UNIPROTKB|D6RDK4 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 CTD:54514 KO:K13982 RefSeq:NP_001160005.1
            UniGene:Hs.223581 GeneID:54514 KEGG:hsa:54514 HGNC:HGNC:18700
            GenomeRNAi:54514 NextBio:56900 EMBL:AC016632 IPI:IPI00953956
            ProteinModelPortal:D6RDK4 SMR:D6RDK4 PRIDE:D6RDK4
            Ensembl:ENST00000514278 UCSC:uc010ivz.3 ArrayExpress:D6RDK4
            Bgee:D6RDK4 Uniprot:D6RDK4
        Length = 704

 Score = 275 (101.9 bits), Expect = 3.7e-22, P = 3.7e-22
 Identities = 65/169 (38%), Positives = 99/169 (58%)

Query:     1 MLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLIT 60
             ++FSAT P  +++L+ ++L +      VG Q       ++   +     SKR  L +++ 
Sbjct:   458 LMFSATFPEEIQRLAAEFLKSNYLFVAVG-QVGGACRDVQQTVLQVGQFSKREKLVEILR 516

Query:    61 VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLV 119
                   +T+VF +TK+ AD ++  L    I++ ++HGD  Q +RE+ L  FR GK  VLV
Sbjct:   517 NIGDE-RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLV 575

Query:   120 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMF 168
             AT VAARGLDI NV  +I+++LP+  + +VHR GRTGR G  G AI  F
Sbjct:   576 ATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFF 624

WARNING:  HSPs involving 643 database sequences were not reported due to the
          limiting value of parameter B = 250.


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.133   0.380    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      470       380   0.00090  117 3  11 22  0.42    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  893
  No. of states in DFA:  610 (65 KB)
  Total size of DFA:  220 KB (2122 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  31.05u 0.10s 31.15t   Elapsed:  00:00:02
  Total cpu time:  31.10u 0.10s 31.20t   Elapsed:  00:00:02
  Start:  Mon May 20 16:27:59 2013   End:  Mon May 20 16:28:01 2013
WARNINGS ISSUED:  2
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with emb1138 emb1138 emb1138 AT5G26742	protein from Arabidopsis thaliana	1.3e-167
BLAST match view associations BLAST with PMH2 PMH2 PMH2 putative mitochondrial RNA helicase 2	protein from Arabidopsis thaliana	1.6e-63
BLAST match view associations BLAST with PMH1 PMH1 PMH1 putative mitochondrial RNA helicase 1	protein from Arabidopsis thaliana	3.8e-62
BLAST match view associations BLAST with ddx21 ddx21 ddx21 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	gene_product from Danio rerio	1.2e-56
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Bos taurus	5.3e-56
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Canis lupus familiaris	5.3e-56
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Canis lupus familiaris	5.3e-56
BLAST match view associations BLAST with DDX50 DDX50 DDX50 ATP-dependent RNA helicase DDX50	protein from Homo sapiens	1.1e-55
BLAST match view associations BLAST with Ddx50 Ddx50 Ddx50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50	protein from Mus musculus	1.1e-55
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Sus scrofa	2.6e-54
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Gallus gallus	4.3e-54
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Canis lupus familiaris	1.5e-53
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Canis lupus familiaris	1.5e-53
BLAST match view associations BLAST with DDX21 DDX21 DDX21 DDX21 protein	protein from Bos taurus	4.4e-53
BLAST match view associations BLAST with Ddx21 Ddx21 Ddx21 DEAD (Asp-Glu-Ala-Asp) box helicase 21	gene from Rattus norvegicus	5.5e-53
BLAST match view associations BLAST with Ddx21 Ddx21 Ddx21 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	protein from Mus musculus	5.6e-53
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Nucleolar RNA helicase 2	protein from Homo sapiens	9.8e-53
BLAST match view associations BLAST with PRH75 PRH75 PRH75	protein from Arabidopsis thaliana	3.5e-52
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Sus scrofa	1.3e-51
BLAST match view associations BLAST with Ddx50 Ddx50 Ddx50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50	gene from Rattus norvegicus	4.2e-47
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Gallus gallus	5.6e-45
BLAST match view associations BLAST with PFE0215w PFE0215w PFE0215w ATP-dependent helicase, putative	gene from Plasmodium falciparum	1.5e-43
BLAST match view associations BLAST with PFE0215w PFE0215w PFE0215w ATP-dependent helicase, putative	protein from Plasmodium falciparum 3D7	1.5e-43
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Geobacillus kaustophilus HTA426	2.1e-36
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus cereus ATCC 10987	1.2e-35
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus thuringiensis str. Al Hakam	3.1e-35
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus cereus E33L	3.1e-35
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus thuringiensis serovar konkukian str. 97-27	3.1e-35
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus cereus ATCC 14579	3.1e-35
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus anthracis	3.1e-35
BLAST match view associations BLAST with BA_0247 BA_0247 BA_0247 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis str. Ames	3.1e-35
BLAST match view associations BLAST with deaD deaD deaD Cold-shock DEAD box protein A	protein from Pseudomonas protegens Pf-5	4.5e-34
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus licheniformis DSM 13 = ATCC 14580	7.4e-34
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus subtilis subsp. subtilis str. 168	9.5e-34
BLAST match view associations BLAST with CHY_0229 CHY_0229 CHY_0229 ATP-dependent RNA helicase, DEAD box family	protein from Carboxydothermus hydrogenoformans Z-2901	3.2e-33
BLAST match view associations BLAST with CHY_0229 CHY_0229 CHY_0229 ATP-dependent RNA helicase, DEAD box family	protein from Carboxydothermus hydrogenoformans Z-2901	3.2e-33
BLAST match view associations BLAST with SO_4034 SO_4034 SO_4034 ATP-dependent RNA helicase DeaD	protein from Shewanella oneidensis MR-1	3.6e-33
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Gallus gallus	2.9e-32
BLAST match view associations BLAST with VC_A0804 VC_A0804 VC_A0804 ATP-dependent RNA helicase DeaD	protein from Vibrio cholerae O1 biovar El Tor str. N16961	1.6e-31
BLAST match view associations BLAST with VC_A0804 VC_A0804 VC_A0804 ATP-dependent RNA helicase DeaD	protein from Vibrio cholerae O1 biovar El Tor	1.6e-31
BLAST match view associations BLAST with DED1 DED1 DED1 ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase	gene from Saccharomyces cerevisiae	6.3e-30
BLAST match view associations BLAST with DBP1 DBP1 DBP1 Putative ATP-dependent RNA helicase of the DEAD-box protein family	gene from Saccharomyces cerevisiae	1.1e-29
BLAST match view associations BLAST with deaD deaD deaD Cold-shock DEAD box protein A homolog	protein from Mycobacterium tuberculosis	1.6e-29
BLAST match view associations BLAST with RRP3 RRP3 RRP3 Protein involved in rRNA processing	gene from Saccharomyces cerevisiae	1.7e-29
BLAST match view associations BLAST with BAS5307 BAS5307 BAS5307 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis	1.8e-29
BLAST match view associations BLAST with BA_5703 BA_5703 BA_5703 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis str. Ames	1.8e-29
BLAST match view associations BLAST with SPO_1443 SPO_1443 SPO_1443 ATP-dependent RNA helicase RhlE	protein from Ruegeria pomeroyi DSS-3	2.1e-29
BLAST match view associations BLAST with orf19.7392 orf19.7392 orf19.7392	gene_product from Candida albicans	3.2e-29
BLAST match view associations BLAST with CPS_1590 CPS_1590 CPS_1590 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	4.4e-29
BLAST match view associations BLAST with AT5G14610 AT5G14610 AT5G14610	protein from Arabidopsis thaliana	6.3e-29
BLAST match view associations BLAST with DRH1 DRH1 DRH1 DEAD box RNA helicase 1	protein from Arabidopsis thaliana	6.7e-29
BLAST match view associations BLAST with CPS_1726 CPS_1726 CPS_1726 RNA helicase DeaD	protein from Colwellia psychrerythraea 34H	8.2e-29
BLAST match view associations BLAST with AT3G58510 AT3G58510 AT3G58510	protein from Arabidopsis thaliana	3.8e-28
BLAST match view associations BLAST with BAS2301 BAS2301 BAS2301 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis	3.9e-28
BLAST match view associations BLAST with BA_2475 BA_2475 BA_2475 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis str. Ames	3.9e-28
BLAST match view associations BLAST with SO_1383 SO_1383 SO_1383 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	6.4e-28
BLAST match view associations BLAST with orf19.7546 orf19.7546 orf19.7546	gene_product from Candida albicans	1.3e-27
BLAST match view associations BLAST with VC_2564 VC_2564 VC_2564 ATP-dependent RNA helicase DbpA	protein from Vibrio cholerae O1 biovar El Tor	1.7e-27
BLAST match view associations BLAST with RH20 RH20 RH20 RNA helicase 20	protein from Arabidopsis thaliana	1.9e-27
BLAST match view associations BLAST with GSU_0914 GSU_0914 GSU_0914 ATP-dependent RNA helicase RhlE	protein from Geobacter sulfurreducens PCA	2.2e-27
BLAST match view associations BLAST with AT3G06480 AT3G06480 AT3G06480	protein from Arabidopsis thaliana	2.9e-27
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Sus scrofa	3.5e-27
BLAST match view associations BLAST with dbpA dbpA dbpA ATP-dependent RNA helicase DbpA	protein from Colwellia psychrerythraea 34H	4.2e-27
BLAST match view associations BLAST with CPS_1540 CPS_1540 CPS_1540 ATP-dependent RNA helicase DbpA	protein from Colwellia psychrerythraea 34H	4.2e-27
BLAST match view associations BLAST with TIF1 TIF1 TIF1 ATP-dependent RNA helicase eIF4A	protein from Magnaporthe oryzae 70-15	4.5e-27
BLAST match view associations BLAST with inf-1 inf-1 inf-1	gene from Caenorhabditis elegans	4.5e-27
BLAST match view associations BLAST with AT5G63120 AT5G63120 AT5G63120	protein from Arabidopsis thaliana	5.3e-27
BLAST match view associations BLAST with rhlE rhlE rhlE ATP-dependent RNA helicase	protein from Escherichia coli K-12	5.5e-27
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Bos taurus	5.9e-27
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Canis lupus familiaris	5.9e-27
BLAST match view associations BLAST with DDX3X DDX3X DDX3X ATP-dependent RNA helicase DDX3X	protein from Homo sapiens	5.9e-27
BLAST match view associations BLAST with PSPPH_0449 PSPPH_0449 PSPPH_0449 ATP-dependent RNA helicase RhlE, putative	protein from Pseudomonas syringae pv. phaseolicola 1448A	6.4e-27
BLAST match view associations BLAST with RVBD_3211 RVBD_3211 RVBD_3211 ATP-dependent RNA helicase rhlE	protein from Mycobacterium tuberculosis H37Rv	7.1e-27
BLAST match view associations BLAST with deaD deaD deaD DeaD, DEAD-box RNA helicase	protein from Escherichia coli K-12	8.4e-27
BLAST match view associations BLAST with GSU_0491 GSU_0491 GSU_0491 ATP-dependent RNA helicase RhlE	protein from Geobacter sulfurreducens PCA	8.8e-27
BLAST match view associations BLAST with rhlE rhlE rhlE ATP-dependent RNA helicase RhlE	protein from Hyphomonas neptunium ATCC 15444	9.1e-27
BLAST match view associations BLAST with DDX3Y DDX3Y DDX3Y cDNA FLJ53122, highly similar to ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-)	protein from Homo sapiens	9.4e-27
BLAST match view associations BLAST with BA_4509 BA_4509 BA_4509 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis str. Ames	9.4e-27
BLAST match view associations BLAST with Ddx3y Ddx3y Ddx3y DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked	protein from Mus musculus	9.5e-27
BLAST match view associations BLAST with Ddx3x Ddx3x Ddx3x DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	protein from Mus musculus	9.7e-27
BLAST match view associations BLAST with Ddx3x Ddx3x Ddx3x DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	gene from Rattus norvegicus	9.7e-27
BLAST match view associations BLAST with I3LHW0 I3LHW0 I3LHW0 Uncharacterized protein	protein from Sus scrofa	1.0e-26
BLAST match view associations BLAST with LOC100524536 LOC100524536 LOC100524536 Uncharacterized protein	protein from Sus scrofa	1.1e-26
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Gallus gallus	1.1e-26
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Gallus gallus	1.1e-26
BLAST match view associations BLAST with DBP3 DBP3 DBP3 RNA-Dependent ATPase, member of DExD/H-box family	gene from Saccharomyces cerevisiae	1.2e-26
BLAST match view associations BLAST with EIF4A3 EIF4A3 EIF4A3 Eukaryotic initiation factor 4A-III	protein from Gallus gallus	1.2e-26
BLAST match view associations BLAST with EIF4A3 EIF4A3 EIF4A3 Eukaryotic initiation factor 4A-III	protein from Gallus gallus	1.2e-26
BLAST match view associations BLAST with EIF4A3 EIF4A3 EIF4A3 Eukaryotic initiation factor 4A-III	protein from Bos taurus	1.2e-26
BLAST match view associations BLAST with EIF4A3 EIF4A3 EIF4A3 Uncharacterized protein	protein from Canis lupus familiaris	1.2e-26
BLAST match view associations BLAST with EIF4A3 EIF4A3 EIF4A3 Eukaryotic initiation factor 4A-III	protein from Homo sapiens	1.2e-26
BLAST match view associations BLAST with EIF4A3 EIF4A3 EIF4A3 Eukaryotic initiation factor 4A-III	protein from Sus scrofa	1.2e-26
BLAST match view associations BLAST with EIF4A3 EIF4A3 EIF4A3 Eukaryotic initiation factor 4A-III	protein from Sus scrofa	1.2e-26
BLAST match view associations BLAST with Eif4a3 Eif4a3 Eif4a3 eukaryotic translation initiation factor 4A, isoform 3	gene from Rattus norvegicus	1.2e-26
BLAST match view associations BLAST with AT1G72730 AT1G72730 AT1G72730	protein from Arabidopsis thaliana	1.2e-26