Query 012138
Match_columns 470
No_of_seqs 314 out of 2715
Neff 9.5
Searched_HMMs 46136
Date Thu Mar 28 23:27:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012138.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012138hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG4992 ArgD Ornithine/acetylo 100.0 6.7E-86 1.5E-90 622.9 42.1 395 38-446 5-400 (404)
2 KOG1402 Ornithine aminotransfe 100.0 2E-83 4.3E-88 577.8 34.5 405 36-442 20-426 (427)
3 COG0160 GabT 4-aminobutyrate a 100.0 7.8E-75 1.7E-79 564.8 44.6 400 34-445 13-446 (447)
4 PLN02624 ornithine-delta-amino 100.0 3.5E-69 7.6E-74 547.3 47.6 467 3-469 1-473 (474)
5 COG0161 BioA Adenosylmethionin 100.0 8.4E-69 1.8E-73 518.7 38.0 398 43-445 6-444 (449)
6 TIGR03372 putres_am_tran putre 100.0 1.2E-66 2.6E-71 520.6 43.7 376 58-441 58-442 (442)
7 PRK05965 hypothetical protein; 100.0 9E-67 1.9E-71 527.0 42.6 402 39-445 3-448 (459)
8 PRK11522 putrescine--2-oxoglut 100.0 1.2E-66 2.5E-71 524.4 43.1 384 56-448 62-455 (459)
9 PRK07482 hypothetical protein; 100.0 1.5E-66 3.3E-71 525.7 43.3 404 38-445 4-455 (461)
10 PRK07678 aminotransferase; Val 100.0 5.8E-66 1.3E-70 520.6 44.8 406 37-446 5-451 (451)
11 PRK06943 adenosylmethionine--8 100.0 1.6E-65 3.4E-70 516.6 43.7 401 39-445 11-447 (453)
12 KOG1404 Alanine-glyoxylate ami 100.0 5.2E-66 1.1E-70 476.4 36.5 392 36-437 8-432 (442)
13 PRK08742 adenosylmethionine--8 100.0 2.5E-65 5.4E-70 515.8 43.6 402 38-445 19-468 (472)
14 PRK06938 diaminobutyrate--2-ox 100.0 4.8E-65 1E-69 514.0 44.5 401 32-445 18-461 (464)
15 PRK07030 adenosylmethionine--8 100.0 9.4E-65 2E-69 512.1 43.1 400 40-445 5-447 (466)
16 PRK06062 hypothetical protein; 100.0 1E-64 2.2E-69 510.9 43.3 397 39-447 13-448 (451)
17 PRK06916 adenosylmethionine--8 100.0 1.3E-64 2.9E-69 511.4 43.4 409 32-446 6-457 (460)
18 PRK07483 hypothetical protein; 100.0 8.8E-65 1.9E-69 510.3 41.8 391 52-446 7-439 (443)
19 PRK07481 hypothetical protein; 100.0 1.1E-64 2.3E-69 511.1 42.2 398 44-446 4-447 (449)
20 PRK06105 aminotransferase; Pro 100.0 2.9E-64 6.2E-69 508.9 42.7 402 39-446 5-451 (460)
21 TIGR03246 arg_catab_astC succi 100.0 4.2E-64 9.1E-69 502.3 43.5 387 50-445 10-396 (397)
22 PRK05639 4-aminobutyrate amino 100.0 6.6E-64 1.4E-68 504.7 44.3 399 36-446 12-445 (457)
23 PRK08593 4-aminobutyrate amino 100.0 1.8E-63 3.9E-68 501.6 44.6 401 38-449 3-434 (445)
24 PRK06058 4-aminobutyrate amino 100.0 1.7E-63 3.6E-68 503.0 44.5 399 36-445 16-443 (443)
25 PRK07480 putative aminotransfe 100.0 9.7E-64 2.1E-68 504.0 42.6 402 39-446 7-450 (456)
26 PRK06931 diaminobutyrate--2-ox 100.0 1.4E-63 3E-68 503.2 43.4 396 38-445 18-455 (459)
27 PRK04612 argD acetylornithine 100.0 1.8E-63 3.9E-68 496.1 43.4 389 50-445 15-404 (408)
28 PRK12403 putative aminotransfe 100.0 1.9E-63 4.2E-68 502.9 44.2 402 39-446 11-454 (460)
29 PLN02760 4-aminobutyrate:pyruv 100.0 8.1E-64 1.8E-68 508.2 41.0 385 56-446 70-493 (504)
30 PRK07495 4-aminobutyrate amino 100.0 4.5E-63 9.6E-68 495.9 45.4 396 40-446 4-423 (425)
31 PRK07036 hypothetical protein; 100.0 3.2E-63 6.8E-68 501.6 43.7 399 41-445 10-453 (466)
32 PRK06173 adenosylmethionine--8 100.0 2E-63 4.3E-68 497.9 40.6 397 40-445 4-426 (429)
33 PRK06541 hypothetical protein; 100.0 6.8E-63 1.5E-67 498.4 44.3 404 37-445 7-456 (460)
34 PRK06148 hypothetical protein; 100.0 3.7E-63 8.1E-68 540.5 45.3 427 4-445 549-1011(1013)
35 PRK04073 rocD ornithine--oxo-a 100.0 6.4E-63 1.4E-67 494.6 42.8 393 38-441 3-395 (396)
36 PRK07986 adenosylmethionine--8 100.0 3E-63 6.6E-68 495.9 39.3 376 58-442 26-422 (428)
37 PRK06082 4-aminobutyrate amino 100.0 1.1E-62 2.4E-67 496.7 43.5 395 37-445 32-452 (459)
38 PRK05630 adenosylmethionine--8 100.0 8.3E-63 1.8E-67 493.0 40.8 376 56-442 21-419 (422)
39 PRK03715 argD acetylornithine 100.0 1E-62 2.2E-67 489.7 40.5 377 54-445 15-394 (395)
40 PRK13360 omega amino acid--pyr 100.0 2.1E-62 4.5E-67 492.9 42.6 385 55-445 26-441 (442)
41 PRK12381 bifunctional succinyl 100.0 2.6E-62 5.6E-67 490.9 43.2 386 53-447 17-402 (406)
42 PRK06149 hypothetical protein; 100.0 2.5E-62 5.4E-67 534.4 46.5 424 4-442 513-969 (972)
43 PRK09221 beta alanine--pyruvat 100.0 2.3E-62 5E-67 493.0 42.5 386 54-445 28-444 (445)
44 PRK08360 4-aminobutyrate amino 100.0 5E-62 1.1E-66 490.3 44.7 398 38-447 2-429 (443)
45 PRK05769 4-aminobutyrate amino 100.0 7.7E-62 1.7E-66 489.2 45.4 399 34-445 12-440 (441)
46 TIGR00709 dat 2,4-diaminobutyr 100.0 2.8E-62 6.1E-67 493.5 42.4 378 56-445 20-436 (442)
47 PRK04013 argD acetylornithine/ 100.0 1.3E-62 2.9E-67 480.6 38.7 357 56-445 5-361 (364)
48 PRK06777 4-aminobutyrate amino 100.0 8.4E-62 1.8E-66 487.5 44.8 394 39-442 3-420 (421)
49 PLN00144 acetylornithine trans 100.0 2.9E-62 6.3E-67 485.1 40.7 374 61-445 1-381 (382)
50 TIGR02407 ectoine_ectB diamino 100.0 3.5E-62 7.6E-67 488.9 41.5 374 56-442 16-411 (412)
51 KOG1401 Acetylornithine aminot 100.0 2E-62 4.2E-67 456.4 35.4 387 51-446 32-432 (433)
52 PRK09792 4-aminobutyrate trans 100.0 1.7E-61 3.7E-66 485.2 43.8 392 41-442 5-420 (421)
53 PRK06917 hypothetical protein; 100.0 1E-61 2.2E-66 488.6 42.2 385 56-445 13-438 (447)
54 PRK09264 diaminobutyrate--2-ox 100.0 1.2E-61 2.6E-66 487.3 42.1 385 51-449 14-421 (425)
55 PRK08117 4-aminobutyrate amino 100.0 1.8E-61 4E-66 488.4 43.4 396 39-445 5-430 (433)
56 PRK06918 4-aminobutyrate amino 100.0 3.5E-61 7.5E-66 487.7 43.9 404 33-447 11-446 (451)
57 PRK05964 adenosylmethionine--8 100.0 3.1E-61 6.8E-66 485.2 43.0 384 56-445 23-423 (423)
58 TIGR00700 GABAtrnsam 4-aminobu 100.0 4.9E-61 1.1E-65 483.0 41.9 378 55-442 13-419 (420)
59 TIGR00699 GABAtrns_euk 4-amino 100.0 1.4E-60 3.1E-65 477.1 43.0 398 33-441 16-464 (464)
60 PRK01278 argD acetylornithine 100.0 3.7E-60 7.9E-65 474.3 43.8 380 54-445 10-389 (389)
61 TIGR01885 Orn_aminotrans ornit 100.0 5.2E-60 1.1E-64 474.6 43.8 400 40-442 2-401 (401)
62 PRK12389 glutamate-1-semialdeh 100.0 9.2E-60 2E-64 473.7 44.0 392 37-445 4-428 (428)
63 PRK00854 rocD ornithine--oxo-a 100.0 2.9E-59 6.3E-64 469.9 43.9 398 37-442 3-400 (401)
64 PLN02482 glutamate-1-semialdeh 100.0 6.8E-59 1.5E-63 468.1 43.5 394 36-445 50-474 (474)
65 COG0001 HemL Glutamate-1-semia 100.0 1.3E-58 2.9E-63 442.0 42.2 394 37-446 5-430 (432)
66 PRK05093 argD bifunctional N-s 100.0 1.5E-58 3.2E-63 464.1 43.9 385 52-445 17-401 (403)
67 PRK08297 L-lysine aminotransfe 100.0 2.9E-59 6.4E-64 470.3 38.4 396 41-445 10-442 (443)
68 PRK03244 argD acetylornithine 100.0 4.4E-58 9.5E-63 460.9 42.8 387 39-446 7-396 (398)
69 TIGR00508 bioA adenosylmethion 100.0 5.1E-58 1.1E-62 460.1 42.5 396 39-442 4-425 (427)
70 PRK00615 glutamate-1-semialdeh 100.0 8.1E-58 1.8E-62 457.0 42.9 392 36-445 4-429 (433)
71 PTZ00125 ornithine aminotransf 100.0 8.9E-58 1.9E-62 459.3 43.0 393 49-446 5-397 (400)
72 PRK07046 aminotransferase; Val 100.0 1.6E-57 3.4E-62 458.0 42.7 390 36-445 27-451 (453)
73 PRK02936 argD acetylornithine 100.0 3.1E-57 6.8E-62 451.6 42.1 370 54-441 8-377 (377)
74 PLN02974 adenosylmethionine-8- 100.0 3E-57 6.4E-62 477.0 43.0 402 38-441 313-816 (817)
75 TIGR03251 LAT_fam L-lysine 6-t 100.0 1.1E-57 2.3E-62 458.7 36.8 392 41-440 3-431 (431)
76 PRK02627 acetylornithine amino 100.0 4E-56 8.6E-61 446.9 43.2 394 38-445 2-395 (396)
77 PF00202 Aminotran_3: Aminotra 100.0 1.2E-56 2.7E-61 437.4 31.5 324 60-387 1-338 (339)
78 TIGR00713 hemL glutamate-1-sem 100.0 3.1E-55 6.6E-60 443.1 42.7 391 39-445 2-423 (423)
79 PRK08088 4-aminobutyrate amino 100.0 1.3E-54 2.7E-59 437.5 45.2 396 39-445 4-424 (425)
80 PRK00062 glutamate-1-semialdeh 100.0 4E-55 8.7E-60 440.6 41.4 393 37-445 2-425 (426)
81 PRK04260 acetylornithine amino 100.0 2.3E-53 5E-58 422.9 42.4 368 54-441 8-375 (375)
82 cd00610 OAT_like Acetyl ornith 100.0 3E-53 6.6E-58 428.5 41.9 386 46-441 5-413 (413)
83 KOG1403 Predicted alanine-glyo 100.0 8.2E-53 1.8E-57 375.1 25.9 397 38-449 6-442 (452)
84 PRK06209 glutamate-1-semialdeh 100.0 3.8E-50 8.2E-55 404.0 40.1 363 56-446 29-407 (431)
85 TIGR00707 argD acetylornithine 100.0 6.1E-50 1.3E-54 399.8 40.9 375 53-441 5-379 (379)
86 KOG1405 4-aminobutyrate aminot 100.0 3.7E-48 7.9E-53 352.5 28.1 400 32-442 33-482 (484)
87 PRK07505 hypothetical protein; 100.0 6.5E-39 1.4E-43 321.9 32.5 349 55-442 26-398 (402)
88 PLN02822 serine palmitoyltrans 100.0 2.7E-37 5.9E-42 314.2 31.3 342 60-445 95-478 (481)
89 PRK13393 5-aminolevulinate syn 100.0 2.4E-35 5.2E-40 296.5 33.4 332 73-446 43-398 (406)
90 TIGR01821 5aminolev_synth 5-am 100.0 1.1E-34 2.3E-39 291.6 33.7 331 73-445 43-397 (402)
91 PRK07179 hypothetical protein; 100.0 1.8E-34 3.8E-39 290.4 34.4 344 48-445 35-399 (407)
92 COG0156 BioF 7-keto-8-aminopel 100.0 1.8E-34 3.8E-39 279.5 31.8 329 66-440 31-387 (388)
93 PRK09064 5-aminolevulinate syn 100.0 7.1E-34 1.5E-38 286.3 33.0 330 74-445 45-398 (407)
94 PRK05958 8-amino-7-oxononanoat 100.0 2.9E-33 6.3E-38 280.2 33.7 346 51-441 17-385 (385)
95 PLN02955 8-amino-7-oxononanoat 100.0 3.3E-33 7.3E-38 276.6 31.8 336 74-446 101-463 (476)
96 TIGR01825 gly_Cac_T_rel pyrido 100.0 1.6E-32 3.5E-37 274.7 33.7 344 57-445 16-382 (385)
97 TIGR01822 2am3keto_CoA 2-amino 100.0 2.4E-32 5.3E-37 274.1 34.8 350 53-445 16-390 (393)
98 PLN03227 serine palmitoyltrans 100.0 8.8E-33 1.9E-37 275.2 30.4 333 78-446 1-384 (392)
99 COG0436 Aspartate/tyrosine/aro 100.0 9.5E-33 2.1E-37 273.3 28.8 336 75-445 28-392 (393)
100 PRK06939 2-amino-3-ketobutyrat 100.0 7.3E-32 1.6E-36 271.2 35.2 345 58-445 25-394 (397)
101 PRK13392 5-aminolevulinate syn 100.0 1E-30 2.2E-35 263.4 32.2 332 73-446 44-399 (410)
102 TIGR00858 bioF 8-amino-7-oxono 100.0 5.4E-30 1.2E-34 254.1 32.3 334 61-438 3-360 (360)
103 COG1168 MalY Bifunctional PLP- 100.0 3.7E-29 7.9E-34 233.2 30.6 354 62-445 10-387 (388)
104 KOG1360 5-aminolevulinate synt 100.0 9.6E-29 2.1E-33 229.1 25.1 323 80-446 177-526 (570)
105 PRK07682 hypothetical protein; 100.0 9.3E-29 2E-33 246.7 27.2 333 77-445 22-377 (378)
106 PLN02483 serine palmitoyltrans 100.0 6.2E-28 1.3E-32 246.2 33.5 332 72-447 97-469 (489)
107 PLN00175 aminotransferase fami 100.0 1.6E-28 3.5E-33 246.8 28.9 333 76-442 55-412 (413)
108 KOG1359 Glycine C-acetyltransf 100.0 1.7E-28 3.7E-33 219.1 25.0 344 54-446 46-414 (417)
109 PRK06207 aspartate aminotransf 100.0 4.8E-28 1E-32 243.1 30.8 340 75-446 39-404 (405)
110 PRK06225 aspartate aminotransf 100.0 7E-28 1.5E-32 240.5 29.4 335 74-447 27-379 (380)
111 PRK06108 aspartate aminotransf 100.0 8.8E-28 1.9E-32 240.2 30.1 332 76-442 25-381 (382)
112 PRK03317 histidinol-phosphate 100.0 8.7E-28 1.9E-32 238.8 29.4 323 76-442 27-363 (368)
113 PRK05937 8-amino-7-oxononanoat 100.0 2.2E-27 4.7E-32 235.8 32.0 322 75-447 4-353 (370)
114 PRK07681 aspartate aminotransf 100.0 1.5E-27 3.3E-32 239.5 29.4 330 74-439 31-384 (399)
115 PRK07324 transaminase; Validat 100.0 7.7E-28 1.7E-32 239.1 26.9 338 69-445 20-371 (373)
116 cd06454 KBL_like KBL_like; thi 100.0 8.4E-27 1.8E-31 230.3 31.7 325 75-440 1-348 (349)
117 PRK07366 succinyldiaminopimela 100.0 2.1E-27 4.6E-32 237.7 27.8 335 73-441 28-388 (388)
118 PRK12414 putative aminotransfe 100.0 3.5E-27 7.5E-32 235.6 28.2 330 76-439 30-383 (384)
119 COG1167 ARO8 Transcriptional r 100.0 9.7E-27 2.1E-31 235.6 30.4 337 73-445 87-456 (459)
120 PRK06348 aspartate aminotransf 100.0 7E-27 1.5E-31 233.5 29.0 331 76-440 30-382 (384)
121 PRK07309 aromatic amino acid a 100.0 1E-26 2.2E-31 232.7 30.1 340 75-446 30-390 (391)
122 PRK06290 aspartate aminotransf 100.0 6.3E-27 1.4E-31 234.8 28.5 341 73-445 42-406 (410)
123 TIGR03537 DapC succinyldiamino 100.0 9.7E-27 2.1E-31 229.6 29.1 328 77-439 2-349 (350)
124 PRK02610 histidinol-phosphate 100.0 6.1E-27 1.3E-31 233.0 27.8 332 75-446 28-373 (374)
125 PRK09148 aminotransferase; Val 100.0 7.3E-27 1.6E-31 234.7 28.4 338 73-447 28-393 (405)
126 PRK09147 succinyldiaminopimela 100.0 1.5E-26 3.3E-31 232.1 30.6 332 73-442 27-395 (396)
127 PRK15481 transcriptional regul 100.0 1.2E-26 2.7E-31 235.2 30.1 328 76-442 86-430 (431)
128 PRK09082 methionine aminotrans 100.0 5.2E-27 1.1E-31 234.6 26.0 330 76-439 31-385 (386)
129 PRK09276 LL-diaminopimelate am 100.0 1.3E-26 2.9E-31 231.8 28.6 330 74-439 30-384 (385)
130 PRK08068 transaminase; Reviewe 100.0 1.3E-26 2.9E-31 231.9 28.2 330 74-439 31-385 (389)
131 TIGR03540 DapC_direct LL-diami 100.0 1.7E-26 3.7E-31 230.8 28.7 330 74-439 28-382 (383)
132 PRK08960 hypothetical protein; 100.0 3.7E-26 8E-31 228.6 31.0 332 74-442 31-386 (387)
133 PRK01533 histidinol-phosphate 100.0 8.1E-27 1.7E-31 230.8 25.2 322 74-446 28-357 (366)
134 KOG0257 Kynurenine aminotransf 100.0 2.1E-27 4.7E-32 223.6 19.7 320 92-438 45-414 (420)
135 PRK08153 histidinol-phosphate 100.0 2.6E-26 5.5E-31 228.0 28.6 322 73-446 29-367 (369)
136 PRK08636 aspartate aminotransf 100.0 4.2E-26 9.1E-31 229.2 30.4 342 73-445 31-401 (403)
137 PRK07865 N-succinyldiaminopime 100.0 2.3E-26 4.9E-31 228.3 27.8 317 74-438 26-363 (364)
138 TIGR03539 DapC_actino succinyl 100.0 2.5E-26 5.4E-31 227.2 27.4 317 73-437 19-356 (357)
139 PRK07683 aminotransferase A; V 100.0 4.2E-26 9.1E-31 228.0 29.3 333 75-442 28-382 (387)
140 TIGR03538 DapC_gpp succinyldia 100.0 5.3E-26 1.1E-30 227.9 29.9 331 72-440 25-392 (393)
141 PRK06107 aspartate aminotransf 100.0 2.4E-26 5.1E-31 231.0 27.4 339 74-445 32-401 (402)
142 PRK03158 histidinol-phosphate 100.0 1.4E-26 3E-31 229.5 25.1 318 76-441 30-359 (359)
143 PRK13355 bifunctional HTH-doma 100.0 2.1E-26 4.5E-31 238.0 27.3 339 72-445 143-515 (517)
144 PRK05942 aspartate aminotransf 100.0 4.9E-26 1.1E-30 228.2 29.2 330 74-439 34-388 (394)
145 PRK05764 aspartate aminotransf 100.0 4.8E-26 1E-30 228.5 28.8 339 74-445 30-392 (393)
146 PRK07777 aminotransferase; Val 100.0 3.5E-26 7.7E-31 228.8 27.6 333 76-442 25-385 (387)
147 PRK08175 aminotransferase; Val 100.0 8E-26 1.7E-30 226.7 30.2 337 74-447 28-392 (395)
148 PRK08363 alanine aminotransfer 100.0 4.6E-26 1E-30 228.8 28.1 340 73-442 28-393 (398)
149 PRK08912 hypothetical protein; 100.0 4.2E-26 9.1E-31 228.3 27.6 334 76-442 27-385 (387)
150 PLN00145 tyrosine/nicotianamin 100.0 8.8E-26 1.9E-30 227.9 30.1 343 74-448 51-428 (430)
151 PRK05957 aspartate aminotransf 100.0 6.4E-26 1.4E-30 226.8 28.8 334 77-445 29-386 (389)
152 TIGR03576 pyridox_MJ0158 pyrid 100.0 5.4E-26 1.2E-30 222.2 27.6 299 92-442 34-346 (346)
153 PRK02731 histidinol-phosphate 100.0 4.6E-26 1E-30 226.5 26.8 324 73-442 30-365 (367)
154 PRK07550 hypothetical protein; 99.9 1.4E-25 3.1E-30 224.4 29.7 333 74-440 28-384 (386)
155 PLN02656 tyrosine transaminase 99.9 2.9E-25 6.2E-30 223.4 32.0 345 73-448 29-407 (409)
156 PTZ00433 tyrosine aminotransfe 99.9 2.3E-25 5E-30 224.4 30.8 349 67-446 25-410 (412)
157 PLN02187 rooty/superroot1 99.9 1.3E-25 2.9E-30 228.1 28.8 347 73-450 64-444 (462)
158 COG0079 HisC Histidinol-phosph 99.9 2.2E-25 4.7E-30 217.1 29.1 313 76-442 23-353 (356)
159 PRK08361 aspartate aminotransf 99.9 1.6E-25 3.4E-30 224.4 28.7 334 75-442 33-389 (391)
160 PLN00143 tyrosine/nicotianamin 99.9 3.6E-25 7.7E-30 222.6 31.0 344 72-447 29-407 (409)
161 PRK14809 histidinol-phosphate 99.9 1.2E-25 2.6E-30 222.5 26.8 319 73-442 28-356 (357)
162 PTZ00377 alanine aminotransfer 99.9 3.6E-25 7.8E-30 227.0 29.9 325 93-446 90-477 (481)
163 PRK05664 threonine-phosphate d 99.9 3.7E-25 8E-30 216.3 28.5 303 76-442 21-327 (330)
164 PRK06855 aminotransferase; Val 99.9 4.5E-25 9.7E-30 223.3 29.5 341 74-444 31-429 (433)
165 PRK07337 aminotransferase; Val 99.9 3.4E-25 7.5E-30 221.7 28.4 333 75-441 30-387 (388)
166 TIGR01264 tyr_amTase_E tyrosin 99.9 9E-25 1.9E-29 219.6 30.7 338 74-445 30-400 (401)
167 PRK07568 aspartate aminotransf 99.9 9.5E-25 2.1E-29 219.4 30.0 336 75-446 30-394 (397)
168 TIGR01141 hisC histidinol-phos 99.9 2.1E-25 4.5E-30 220.0 24.6 316 75-438 19-346 (346)
169 PRK00950 histidinol-phosphate 99.9 7.4E-25 1.6E-29 217.4 27.7 319 72-442 31-361 (361)
170 PRK05839 hypothetical protein; 99.9 7.7E-25 1.7E-29 217.8 27.7 324 74-442 23-373 (374)
171 PRK06358 threonine-phosphate d 99.9 1.4E-24 3E-29 214.3 28.8 318 75-441 19-353 (354)
172 PRK08056 threonine-phosphate d 99.9 9E-25 2E-29 216.0 26.4 324 72-442 17-354 (356)
173 PRK03321 putative aminotransfe 99.9 6.2E-25 1.3E-29 217.1 24.6 320 76-442 23-350 (352)
174 PRK09105 putative aminotransfe 99.9 2.1E-24 4.6E-29 214.0 28.2 316 75-442 43-369 (370)
175 PRK05387 histidinol-phosphate 99.9 1.5E-24 3.2E-29 214.5 26.7 321 74-442 23-352 (353)
176 PLN03026 histidinol-phosphate 99.9 2.1E-24 4.6E-29 214.9 27.9 321 73-440 50-379 (380)
177 PRK04870 histidinol-phosphate 99.9 1.9E-24 4.2E-29 213.8 27.1 321 74-441 25-356 (356)
178 PRK09440 avtA valine--pyruvate 99.9 1.6E-24 3.5E-29 218.9 27.0 345 76-445 31-412 (416)
179 PF00155 Aminotran_1_2: Aminot 99.9 1.8E-24 3.8E-29 214.9 26.3 324 76-437 2-363 (363)
180 PRK06836 aspartate aminotransf 99.9 6.5E-24 1.4E-28 212.7 30.1 330 75-445 33-392 (394)
181 PRK14807 histidinol-phosphate 99.9 9.3E-24 2E-28 208.4 30.7 318 77-441 24-350 (351)
182 PRK07590 L,L-diaminopimelate a 99.9 2.2E-24 4.8E-29 217.2 26.3 336 74-441 33-409 (409)
183 TIGR01265 tyr_nico_aTase tyros 99.9 1.5E-23 3.2E-28 210.8 31.9 340 73-445 29-402 (403)
184 cd00609 AAT_like Aspartate ami 99.9 3.9E-24 8.5E-29 211.0 26.8 284 119-439 42-350 (350)
185 PLN02672 methionine S-methyltr 99.9 7.6E-24 1.6E-28 227.2 30.8 340 68-442 690-1079(1082)
186 PRK08354 putative aminotransfe 99.9 9.2E-24 2E-28 204.8 28.7 298 74-440 7-309 (311)
187 PRK06425 histidinol-phosphate 99.9 3.6E-24 7.9E-29 209.6 25.9 277 114-442 37-332 (332)
188 PRK14808 histidinol-phosphate 99.9 2.2E-24 4.7E-29 211.1 24.1 319 63-440 7-334 (335)
189 TIGR03392 FeS_syn_CsdA cystein 99.9 2.3E-23 4.9E-28 209.4 31.8 329 74-445 16-396 (398)
190 PRK09265 aminotransferase AlaT 99.9 1.3E-23 2.7E-28 211.4 29.8 340 73-445 31-402 (404)
191 PLN02231 alanine transaminase 99.9 7E-24 1.5E-28 217.9 28.0 326 93-446 142-529 (534)
192 cd00613 GDC-P Glycine cleavage 99.9 4.9E-24 1.1E-28 214.4 26.4 320 83-437 24-398 (398)
193 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 1.1E-23 2.5E-28 209.1 28.6 291 117-445 51-369 (370)
194 PRK05166 histidinol-phosphate 99.9 7.4E-24 1.6E-28 210.7 26.9 322 74-442 35-370 (371)
195 PRK09257 aromatic amino acid a 99.9 5.2E-24 1.1E-28 213.7 25.1 336 76-441 27-396 (396)
196 PRK06959 putative threonine-ph 99.9 8.7E-24 1.9E-28 207.1 25.8 305 75-446 24-335 (339)
197 PLN02721 threonine aldolase 99.9 1.7E-23 3.7E-28 207.0 27.9 329 76-442 6-351 (353)
198 KOG0259 Tyrosine aminotransfer 99.9 2.8E-23 6E-28 192.5 26.9 339 75-446 61-435 (447)
199 PTZ00376 aspartate aminotransf 99.9 6.6E-24 1.4E-28 213.3 24.8 336 75-442 29-402 (404)
200 TIGR03542 DAPAT_plant LL-diami 99.9 1.4E-23 3E-28 211.0 26.7 338 74-441 32-402 (402)
201 PRK07392 threonine-phosphate d 99.9 2.3E-23 4.9E-28 206.4 27.9 320 75-442 22-358 (360)
202 COG1104 NifS Cysteine sulfinat 99.9 2.1E-23 4.5E-28 198.9 25.1 335 76-448 3-381 (386)
203 PRK10874 cysteine sulfinate de 99.9 1.1E-22 2.4E-27 204.6 31.3 329 74-445 19-399 (401)
204 cd06502 TA_like Low-specificit 99.9 9.4E-24 2E-28 207.6 22.7 320 79-439 1-337 (338)
205 PLN02450 1-aminocyclopropane-1 99.9 5.5E-23 1.2E-27 209.3 27.4 303 116-446 89-432 (468)
206 TIGR01140 L_thr_O3P_dcar L-thr 99.9 5.1E-23 1.1E-27 201.3 26.1 268 118-437 48-329 (330)
207 PRK01688 histidinol-phosphate 99.9 1.7E-23 3.7E-28 206.3 22.9 282 114-438 54-351 (351)
208 PRK09295 bifunctional cysteine 99.9 2.2E-22 4.7E-27 202.7 31.3 330 74-442 23-403 (406)
209 PLN02376 1-aminocyclopropane-1 99.9 7.8E-23 1.7E-27 208.9 27.8 304 116-447 97-441 (496)
210 PRK09275 aspartate aminotransf 99.9 6E-24 1.3E-28 215.4 19.1 339 76-446 101-519 (527)
211 cd06453 SufS_like Cysteine des 99.9 1.2E-22 2.7E-27 202.4 28.2 312 89-437 8-373 (373)
212 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 4E-22 8.6E-27 199.2 31.7 321 87-445 27-382 (387)
213 TIGR03402 FeS_nifS cysteine de 99.9 2E-22 4.3E-27 201.3 29.2 319 92-447 11-375 (379)
214 COG0520 csdA Selenocysteine ly 99.9 4E-22 8.8E-27 197.3 30.7 329 75-442 23-404 (405)
215 TIGR01979 sufS cysteine desulf 99.9 5.7E-22 1.2E-26 199.7 31.6 327 76-445 20-402 (403)
216 PRK13520 L-tyrosine decarboxyl 99.9 5.2E-22 1.1E-26 197.8 30.6 311 91-442 31-370 (371)
217 cd06451 AGAT_like Alanine-glyo 99.9 1.7E-22 3.7E-27 200.1 26.2 313 92-442 10-356 (356)
218 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 2.8E-22 6E-27 198.5 27.6 316 92-441 10-355 (355)
219 PLN02607 1-aminocyclopropane-1 99.9 1.4E-22 3.1E-27 204.7 25.8 302 116-446 98-439 (447)
220 PRK04781 histidinol-phosphate 99.9 3E-22 6.4E-27 198.4 27.4 288 119-442 61-362 (364)
221 PLN02855 Bifunctional selenocy 99.9 8.1E-22 1.7E-26 199.6 29.5 334 75-448 33-422 (424)
222 PLN02397 aspartate transaminas 99.9 2.1E-22 4.6E-27 203.0 25.1 255 164-442 141-420 (423)
223 TIGR01976 am_tr_V_VC1184 cyste 99.9 8.7E-22 1.9E-26 198.0 29.0 320 75-437 18-397 (397)
224 PRK10534 L-threonine aldolase; 99.9 1.7E-22 3.7E-27 198.1 22.6 318 77-442 1-332 (333)
225 PRK03967 histidinol-phosphate 99.9 5.8E-22 1.3E-26 194.4 25.4 309 73-442 16-333 (337)
226 PRK08637 hypothetical protein; 99.9 1.5E-21 3.2E-26 195.3 28.8 302 116-446 47-388 (388)
227 TIGR02326 transamin_PhnW 2-ami 99.9 1.4E-21 3E-26 194.1 28.2 294 117-442 35-361 (363)
228 PRK04635 histidinol-phosphate 99.9 3.2E-22 7E-27 197.7 23.4 278 118-439 61-351 (354)
229 PRK07908 hypothetical protein; 99.9 2.3E-21 5E-26 191.3 29.3 310 74-442 21-346 (349)
230 TIGR03801 asp_4_decarbox aspar 99.9 9.1E-23 2E-27 206.6 19.5 336 77-445 96-517 (521)
231 PRK13238 tnaA tryptophanase/L- 99.9 1.4E-20 2.9E-25 190.3 33.4 329 95-450 58-439 (460)
232 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 1E-20 2.2E-25 187.6 31.1 323 88-441 9-360 (361)
233 PRK02948 cysteine desulfurase; 99.9 2.3E-21 5.1E-26 193.7 26.2 321 91-446 11-376 (381)
234 TIGR03403 nifS_epsilon cystein 99.9 7.6E-21 1.6E-25 190.0 28.7 329 77-448 2-379 (382)
235 KOG1358 Serine palmitoyltransf 99.9 1.1E-21 2.5E-26 182.3 20.4 342 60-442 80-464 (467)
236 TIGR01814 kynureninase kynuren 99.9 2.2E-20 4.7E-25 188.0 31.1 318 92-441 39-405 (406)
237 TIGR01977 am_tr_V_EF2568 cyste 99.9 1.4E-20 3.1E-25 187.8 28.3 312 92-439 12-375 (376)
238 PRK13034 serine hydroxymethylt 99.9 4.8E-20 1E-24 185.1 31.0 321 92-446 40-394 (416)
239 TIGR01437 selA_rel uncharacter 99.9 5E-20 1.1E-24 182.0 30.5 319 75-441 8-363 (363)
240 PLN02368 alanine transaminase 99.9 2.4E-21 5.3E-26 193.3 21.1 243 116-384 110-392 (407)
241 PRK13479 2-aminoethylphosphona 99.9 3E-20 6.4E-25 184.9 28.6 318 92-445 16-364 (368)
242 TIGR02006 IscS cysteine desulf 99.9 3.1E-20 6.8E-25 186.6 28.7 330 75-447 4-380 (402)
243 PLN02409 serine--glyoxylate am 99.9 2.3E-20 5E-25 187.2 26.4 318 92-446 20-374 (401)
244 TIGR03812 tyr_de_CO2_Arch tyro 99.9 1.1E-19 2.3E-24 181.3 31.0 311 92-439 32-372 (373)
245 cd00614 CGS_like CGS_like: Cys 99.9 6.3E-21 1.4E-25 189.1 21.1 288 114-442 37-369 (369)
246 COG3977 Alanine-alpha-ketoisov 99.9 9.2E-20 2E-24 164.0 25.4 308 115-445 76-412 (417)
247 KOG1357 Serine palmitoyltransf 99.9 7E-21 1.5E-25 180.2 18.5 309 89-442 153-501 (519)
248 PF00266 Aminotran_5: Aminotra 99.9 9.6E-20 2.1E-24 181.3 27.0 309 91-433 10-371 (371)
249 PLN02242 methionine gamma-lyas 99.9 1.9E-20 4.1E-25 187.4 21.5 294 114-446 73-417 (418)
250 COG2008 GLY1 Threonine aldolas 99.9 5.4E-20 1.2E-24 171.9 23.0 328 78-441 2-341 (342)
251 cd00378 SHMT Serine-glycine hy 99.9 8.8E-20 1.9E-24 183.7 26.6 328 75-446 19-387 (402)
252 TIGR02379 ECA_wecE TDP-4-keto- 99.9 1.1E-19 2.3E-24 180.0 26.2 307 94-441 11-375 (376)
253 PRK06767 methionine gamma-lyas 99.9 3.7E-20 8E-25 184.4 22.0 284 113-442 57-384 (386)
254 KOG0256 1-aminocyclopropane-1- 99.9 2.8E-19 6E-24 167.6 26.1 284 131-442 145-460 (471)
255 KOG0634 Aromatic amino acid am 99.9 7.2E-19 1.6E-23 166.2 27.1 285 134-445 126-467 (472)
256 PRK14012 cysteine desulfurase; 99.9 6.2E-19 1.4E-23 177.4 28.8 331 75-447 4-382 (404)
257 PRK00011 glyA serine hydroxyme 99.8 1.3E-18 2.9E-23 175.8 31.1 331 75-446 25-391 (416)
258 PLN02651 cysteine desulfurase 99.8 2.1E-19 4.5E-24 178.4 23.3 305 92-431 11-364 (364)
259 PRK06234 methionine gamma-lyas 99.8 1.8E-19 3.9E-24 180.1 22.7 287 112-442 59-396 (400)
260 PRK07049 methionine gamma-lyas 99.8 2E-19 4.3E-24 180.7 22.8 293 112-442 78-425 (427)
261 cd00616 AHBA_syn 3-amino-5-hyd 99.8 3.6E-19 7.7E-24 176.0 24.0 299 98-438 3-352 (352)
262 PRK08247 cystathionine gamma-s 99.8 2.6E-19 5.6E-24 177.2 22.6 284 112-442 47-363 (366)
263 PRK08249 cystathionine gamma-s 99.8 2.7E-19 5.8E-24 178.3 22.7 286 113-442 60-392 (398)
264 cd06450 DOPA_deC_like DOPA dec 99.8 4.1E-19 9E-24 175.1 23.8 285 116-439 37-344 (345)
265 cd00617 Tnase_like Tryptophana 99.8 6E-19 1.3E-23 176.0 25.1 342 72-450 17-414 (431)
266 TIGR01325 O_suc_HS_sulf O-succ 99.8 2E-19 4.4E-24 178.7 20.3 287 113-441 50-380 (380)
267 PRK07810 O-succinylhomoserine 99.8 4.6E-19 9.9E-24 176.9 22.4 289 112-441 65-402 (403)
268 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 1.6E-18 3.5E-23 172.4 26.0 308 94-441 11-374 (375)
269 PRK07504 O-succinylhomoserine 99.8 4.4E-19 9.5E-24 177.0 21.7 289 113-442 61-394 (398)
270 COG0399 WecE Predicted pyridox 99.8 2.5E-18 5.5E-23 165.8 25.6 308 94-442 15-372 (374)
271 TIGR01328 met_gam_lyase methio 99.8 5E-19 1.1E-23 176.2 21.5 291 111-442 53-389 (391)
272 PRK11658 UDP-4-amino-4-deoxy-L 99.8 2.7E-18 5.9E-23 170.8 26.5 310 94-442 14-378 (379)
273 PRK08133 O-succinylhomoserine 99.8 4.1E-19 8.9E-24 176.9 20.6 287 114-442 58-389 (390)
274 PRK06460 hypothetical protein; 99.8 9E-19 1.9E-23 173.6 22.4 285 114-442 42-373 (376)
275 TIGR02080 O_succ_thio_ly O-suc 99.8 8.5E-19 1.8E-23 173.9 22.1 290 112-442 46-380 (382)
276 KOG1368 Threonine aldolase [Am 99.8 8.1E-19 1.8E-23 157.8 19.5 328 77-442 23-368 (384)
277 TIGR01324 cysta_beta_ly_B cyst 99.8 2E-18 4.4E-23 170.6 23.6 289 114-442 47-375 (377)
278 PRK08045 cystathionine gamma-s 99.8 2.9E-18 6.2E-23 170.2 24.7 290 112-442 47-381 (386)
279 PRK08861 cystathionine gamma-s 99.8 9.5E-19 2E-23 173.1 21.0 294 111-447 47-386 (388)
280 PRK08776 cystathionine gamma-s 99.8 2.1E-18 4.5E-23 172.2 23.2 289 113-442 56-389 (405)
281 PRK08574 cystathionine gamma-s 99.8 1.2E-18 2.6E-23 173.0 21.4 289 113-442 49-383 (385)
282 PRK07269 cystathionine gamma-s 99.8 2.2E-18 4.7E-23 169.7 22.0 282 112-442 49-363 (364)
283 COG0075 Serine-pyruvate aminot 99.8 1.8E-17 4E-22 159.6 27.5 320 92-447 16-366 (383)
284 PRK06084 O-acetylhomoserine am 99.8 2.7E-18 5.9E-23 172.2 22.4 289 113-442 54-421 (425)
285 PRK07503 methionine gamma-lyas 99.8 6.8E-18 1.5E-22 168.8 24.8 289 113-442 61-395 (403)
286 PRK07050 cystathionine beta-ly 99.8 5E-18 1.1E-22 169.1 23.7 294 111-442 59-390 (394)
287 PRK07811 cystathionine gamma-s 99.8 6.2E-18 1.4E-22 168.3 24.4 289 114-442 58-387 (388)
288 PTZ00094 serine hydroxymethylt 99.8 1.4E-17 3.1E-22 169.4 25.9 321 92-445 46-409 (452)
289 PRK05968 hypothetical protein; 99.8 6E-18 1.3E-22 168.5 22.5 278 114-442 60-385 (389)
290 PRK00451 glycine dehydrogenase 99.8 3.1E-17 6.7E-22 167.3 27.2 278 121-441 116-446 (447)
291 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 2.7E-18 5.8E-23 172.6 19.0 161 113-309 53-219 (418)
292 PRK15407 lipopolysaccharide bi 99.8 7.2E-17 1.6E-21 162.6 27.7 314 97-442 47-435 (438)
293 PRK13580 serine hydroxymethylt 99.8 1.2E-16 2.6E-21 159.2 28.4 298 124-446 102-447 (493)
294 TIGR03235 DNA_S_dndA cysteine 99.8 5.8E-18 1.3E-22 167.4 19.1 291 90-412 8-321 (353)
295 TIGR03588 PseC UDP-4-keto-6-de 99.8 1E-16 2.2E-21 160.0 26.6 312 94-441 10-380 (380)
296 KOG1549 Cysteine desulfurase N 99.8 5.4E-17 1.2E-21 155.7 22.9 343 75-450 44-424 (428)
297 PRK09028 cystathionine beta-ly 99.8 5.9E-17 1.3E-21 160.2 24.0 289 114-442 58-386 (394)
298 TIGR01329 cysta_beta_ly_E cyst 99.8 1.4E-17 2.9E-22 165.3 19.0 285 115-442 45-374 (378)
299 PRK07582 cystathionine gamma-l 99.8 1.1E-16 2.3E-21 158.3 24.8 280 113-438 47-364 (366)
300 PF01041 DegT_DnrJ_EryC1: DegT 99.8 8.4E-17 1.8E-21 159.3 24.0 301 94-438 5-363 (363)
301 PLN03226 serine hydroxymethylt 99.8 3.5E-16 7.7E-21 158.6 28.9 313 92-445 46-420 (475)
302 TIGR01788 Glu-decarb-GAD gluta 99.8 6.2E-16 1.4E-20 154.7 30.3 331 92-445 53-430 (431)
303 PRK08248 O-acetylhomoserine am 99.8 3.6E-17 7.9E-22 164.3 20.9 291 114-446 61-429 (431)
304 PRK05994 O-acetylhomoserine am 99.8 7.9E-17 1.7E-21 162.1 22.6 288 114-442 60-425 (427)
305 PRK06702 O-acetylhomoserine am 99.8 8.6E-17 1.9E-21 160.4 22.4 285 115-442 59-423 (432)
306 PLN02509 cystathionine beta-ly 99.8 8E-17 1.7E-21 162.1 22.4 283 115-442 131-460 (464)
307 PRK05939 hypothetical protein; 99.8 4.5E-17 9.7E-22 162.2 20.0 286 114-442 44-395 (397)
308 PLN02414 glycine dehydrogenase 99.8 7.7E-16 1.7E-20 165.6 29.8 302 119-450 570-913 (993)
309 PRK08134 O-acetylhomoserine am 99.8 7.7E-17 1.7E-21 161.8 20.9 288 114-445 61-428 (433)
310 PRK08064 cystathionine beta-ly 99.8 7.7E-17 1.7E-21 160.6 20.7 284 114-439 51-382 (390)
311 PRK05967 cystathionine beta-ly 99.7 3.6E-16 7.8E-21 154.4 22.9 291 113-442 60-390 (395)
312 PRK07812 O-acetylhomoserine am 99.7 2.1E-16 4.5E-21 158.6 21.1 291 114-447 66-434 (436)
313 PRK04366 glycine dehydrogenase 99.7 1.8E-15 4E-20 154.7 28.5 326 91-447 81-451 (481)
314 PRK02769 histidine decarboxyla 99.7 5E-15 1.1E-19 146.3 30.4 287 118-448 66-376 (380)
315 PRK06176 cystathionine gamma-s 99.7 7.1E-17 1.5E-21 160.1 17.2 288 113-442 46-377 (380)
316 PRK08114 cystathionine beta-ly 99.7 3.3E-16 7.1E-21 154.4 21.2 292 112-442 57-392 (395)
317 KOG0633 Histidinol phosphate a 99.7 2.9E-16 6.2E-21 138.9 17.7 271 131-441 85-375 (375)
318 PRK07671 cystathionine beta-ly 99.7 1.9E-16 4.1E-21 157.0 18.7 285 114-441 47-376 (377)
319 PRK03080 phosphoserine aminotr 99.7 9.4E-16 2E-20 152.6 22.5 308 92-446 23-375 (378)
320 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 4.8E-16 1.1E-20 153.0 19.7 285 113-442 51-386 (386)
321 KOG2862 Alanine-glyoxylate ami 99.7 3.1E-14 6.7E-19 129.4 26.8 306 87-442 39-381 (385)
322 PRK05355 3-phosphoserine/phosp 99.7 3.5E-15 7.7E-20 147.0 22.1 309 92-442 14-357 (360)
323 TIGR01364 serC_1 phosphoserine 99.7 8.8E-15 1.9E-19 143.5 23.6 308 92-442 3-347 (349)
324 COG2873 MET17 O-acetylhomoseri 99.7 1.6E-15 3.4E-20 141.3 16.9 164 112-308 57-223 (426)
325 PRK05613 O-acetylhomoserine am 99.7 2.1E-15 4.6E-20 151.4 19.4 288 114-442 66-435 (437)
326 PRK04311 selenocysteine syntha 99.7 7.1E-14 1.5E-18 140.8 30.3 313 92-442 98-463 (464)
327 TIGR01366 serC_3 phosphoserine 99.7 3.9E-15 8.4E-20 147.0 20.2 309 92-445 14-361 (361)
328 PLN03032 serine decarboxylase; 99.7 6.7E-14 1.5E-18 137.3 28.5 281 118-439 67-372 (374)
329 PLN02724 Molybdenum cofactor s 99.7 6.5E-14 1.4E-18 151.6 30.7 341 75-442 35-487 (805)
330 PRK12566 glycine dehydrogenase 99.7 3.5E-14 7.6E-19 150.1 27.7 306 119-452 545-884 (954)
331 PRK05367 glycine dehydrogenase 99.7 8.2E-14 1.8E-18 150.8 30.6 307 119-451 544-882 (954)
332 TIGR03531 selenium_SpcS O-phos 99.7 2E-14 4.3E-19 143.3 23.9 302 117-441 105-444 (444)
333 cd00611 PSAT_like Phosphoserin 99.7 2.7E-14 5.9E-19 141.0 24.2 306 92-440 10-353 (355)
334 PRK06434 cystathionine gamma-l 99.7 8.4E-15 1.8E-19 144.6 20.1 284 114-442 61-383 (384)
335 TIGR00474 selA seryl-tRNA(sec) 99.7 2.5E-13 5.5E-18 136.5 30.6 308 92-437 93-453 (454)
336 COG3844 Kynureninase [Amino ac 99.6 2.8E-13 6.1E-18 124.0 27.6 334 70-445 27-403 (407)
337 TIGR00461 gcvP glycine dehydro 99.6 3.5E-13 7.6E-18 143.6 31.3 307 118-451 531-874 (939)
338 PLN02880 tyrosine decarboxylas 99.6 8.2E-14 1.8E-18 142.1 23.6 316 116-445 121-485 (490)
339 PRK13237 tyrosine phenol-lyase 99.6 4.9E-13 1.1E-17 132.0 27.3 339 74-450 44-439 (460)
340 COG0626 MetC Cystathionine bet 99.6 1.3E-13 2.9E-18 134.0 22.1 289 114-442 60-393 (396)
341 cd00615 Orn_deC_like Ornithine 99.6 1.1E-14 2.5E-19 139.9 14.6 225 115-362 57-293 (294)
342 TIGR02618 tyr_phenol_ly tyrosi 99.6 5.6E-13 1.2E-17 131.2 25.5 341 74-450 37-432 (450)
343 KOG0053 Cystathionine beta-lya 99.6 6.3E-14 1.4E-18 134.5 17.7 195 114-340 74-272 (409)
344 COG1103 Archaea-specific pyrid 99.6 1.4E-12 3.1E-17 116.3 24.8 317 92-444 29-380 (382)
345 COG1003 GcvP Glycine cleavage 99.6 2E-12 4.3E-17 123.0 25.6 307 117-457 109-460 (496)
346 PLN02590 probable tyrosine dec 99.6 4.7E-12 1E-16 129.5 29.8 316 117-446 170-534 (539)
347 KOG0258 Alanine aminotransfera 99.5 1.2E-12 2.6E-17 122.5 21.4 321 93-442 88-468 (475)
348 COG0112 GlyA Glycine/serine hy 99.5 6E-12 1.3E-16 118.9 26.0 318 92-446 38-392 (413)
349 PLN02263 serine decarboxylase 99.5 2E-11 4.4E-16 121.7 31.2 284 118-442 134-442 (470)
350 PF12897 Aminotran_MocR: Alani 99.5 1.3E-11 2.9E-16 116.5 25.4 303 117-442 69-414 (425)
351 cd01494 AAT_I Aspartate aminot 99.5 5.6E-13 1.2E-17 116.9 14.5 158 119-308 2-170 (170)
352 PLN02271 serine hydroxymethylt 99.5 8.1E-11 1.8E-15 118.3 30.0 286 124-442 201-539 (586)
353 PF01276 OKR_DC_1: Orn/Lys/Arg 99.4 6.8E-12 1.5E-16 123.2 19.3 293 115-428 64-416 (417)
354 PLN02452 phosphoserine transam 99.4 2.7E-11 5.9E-16 118.9 23.5 323 76-442 7-362 (365)
355 TIGR03799 NOD_PanD_pyr putativ 99.4 5.7E-11 1.2E-15 121.7 26.5 301 117-436 129-518 (522)
356 PF00464 SHMT: Serine hydroxym 99.4 1.2E-11 2.6E-16 120.9 20.6 281 124-437 73-399 (399)
357 PRK15029 arginine decarboxylas 99.4 1E-10 2.2E-15 123.1 26.7 308 117-442 205-603 (755)
358 COG0076 GadB Glutamate decarbo 99.4 1.7E-10 3.8E-15 116.0 24.4 295 92-410 74-401 (460)
359 TIGR02617 tnaA_trp_ase tryptop 99.4 7.9E-10 1.7E-14 108.2 27.1 340 76-450 42-447 (467)
360 COG1448 TyrB Aspartate/tyrosin 99.3 4.2E-10 9E-15 106.3 22.4 273 135-441 97-396 (396)
361 PF01212 Beta_elim_lyase: Beta 99.3 6.9E-12 1.5E-16 119.1 10.4 198 92-314 7-214 (290)
362 PRK12462 phosphoserine aminotr 99.3 6.8E-10 1.5E-14 108.0 23.7 320 77-442 5-361 (364)
363 KOG2040 Glycine dehydrogenase 99.3 2.5E-10 5.4E-15 113.2 20.4 311 116-451 581-925 (1001)
364 TIGR01365 serC_2 phosphoserine 99.3 3.2E-10 6.9E-15 111.5 20.0 304 93-442 15-372 (374)
365 PRK13578 ornithine decarboxyla 99.3 4.7E-10 1E-14 117.1 21.6 308 116-442 173-564 (720)
366 PRK15399 lysine decarboxylase 99.3 2.2E-09 4.7E-14 112.1 26.2 305 116-442 194-558 (713)
367 PRK15400 lysine decarboxylase 99.3 2E-09 4.2E-14 112.4 25.5 302 116-442 194-558 (714)
368 PRK05367 glycine dehydrogenase 99.2 3.6E-09 7.9E-14 115.1 25.8 272 120-438 124-437 (954)
369 PLN02414 glycine dehydrogenase 99.2 1.3E-08 2.8E-13 110.5 27.9 300 92-439 117-465 (993)
370 COG1921 SelA Selenocysteine sy 99.2 1.1E-09 2.4E-14 105.2 17.1 221 93-344 40-272 (395)
371 PF03841 SelA: L-seryl-tRNA se 99.2 4.8E-11 1E-15 113.4 6.4 227 85-342 9-260 (367)
372 KOG3846 L-kynurenine hydrolase 99.1 2.8E-08 6E-13 90.8 21.3 334 87-445 74-462 (465)
373 TIGR00461 gcvP glycine dehydro 99.1 5E-08 1.1E-12 104.7 26.3 275 120-438 112-426 (939)
374 COG3033 TnaA Tryptophanase [Am 99.1 3.1E-07 6.6E-12 86.0 26.4 317 117-451 79-451 (471)
375 PF00282 Pyridoxal_deC: Pyrido 99.0 1.9E-08 4.1E-13 99.5 19.3 234 118-363 80-353 (373)
376 PF02347 GDC-P: Glycine cleava 98.9 1.6E-07 3.6E-12 92.5 21.9 278 119-437 112-429 (429)
377 COG0403 GcvP Glycine cleavage 98.9 5.6E-07 1.2E-11 86.4 24.4 280 121-441 124-448 (450)
378 COG1982 LdcC Arginine/lysine/o 98.9 4.8E-07 1E-11 91.2 24.3 293 115-438 68-403 (557)
379 PF06838 Met_gamma_lyase: Meth 98.8 1.7E-07 3.6E-12 88.6 15.9 202 93-316 26-246 (403)
380 KOG2467 Glycine/serine hydroxy 98.8 4E-07 8.7E-12 85.3 17.7 270 136-442 110-425 (477)
381 KOG1383 Glutamate decarboxylas 98.8 3.3E-06 7.1E-11 82.0 23.2 331 93-451 93-453 (491)
382 TIGR03811 tyr_de_CO2_Ent tyros 98.6 3.2E-05 7E-10 80.5 26.2 234 117-364 123-475 (608)
383 PF05889 SLA_LP_auto_ag: Solub 98.6 4E-06 8.7E-11 80.9 17.1 221 210-442 140-389 (389)
384 PRK12566 glycine dehydrogenase 98.5 2.3E-05 5.1E-10 84.2 24.3 273 120-438 127-439 (954)
385 PF04864 Alliinase_C: Allinase 98.5 4.3E-06 9.3E-11 78.7 15.9 279 119-440 45-362 (363)
386 COG1932 SerC Phosphoserine ami 98.5 1.9E-05 4.2E-10 74.8 19.7 196 225-442 145-362 (365)
387 KOG1412 Aspartate aminotransfe 98.2 8.8E-05 1.9E-09 68.5 16.9 277 137-446 104-407 (410)
388 COG4100 Cystathionine beta-lya 98.2 0.00011 2.4E-09 67.6 17.2 175 119-316 67-257 (416)
389 KOG0629 Glutamate decarboxylas 98.1 0.00036 7.7E-09 67.3 19.1 304 121-441 145-507 (510)
390 KOG0628 Aromatic-L-amino-acid/ 98.1 0.0004 8.8E-09 67.7 18.9 311 121-448 117-475 (511)
391 KOG1411 Aspartate aminotransfe 97.8 0.00049 1.1E-08 64.7 12.9 270 133-442 119-424 (427)
392 KOG2040 Glycine dehydrogenase 96.9 0.14 3E-06 52.6 19.4 263 126-438 172-478 (1001)
393 PLN02994 1-aminocyclopropane-1 96.4 0.012 2.6E-07 50.3 7.1 55 114-178 93-153 (153)
394 KOG3843 Predicted serine hydro 95.9 0.025 5.5E-07 51.4 6.9 54 210-268 142-197 (432)
395 COG1088 RfbB dTDP-D-glucose 4, 67.6 1.1E+02 0.0023 29.3 11.6 100 165-277 26-140 (340)
396 KOG2790 Phosphoserine aminotra 66.6 67 0.0015 30.3 9.9 177 255-442 172-367 (370)
397 COG0108 RibB 3,4-dihydroxy-2-b 65.4 13 0.00027 33.0 4.8 37 222-263 154-190 (203)
398 smart00642 Aamy Alpha-amylase 60.5 22 0.00047 30.8 5.5 57 210-268 17-93 (166)
399 PF04002 RadC: RadC-like JAB d 54.0 28 0.00061 28.4 4.9 47 212-262 55-104 (123)
400 COG1105 FruK Fructose-1-phosph 52.0 35 0.00076 32.7 5.8 39 226-268 131-169 (310)
401 KOG0352 ATP-dependent DNA heli 51.8 1.9E+02 0.0042 29.1 10.7 55 222-293 111-169 (641)
402 COG0296 GlgB 1,4-alpha-glucan 51.1 17 0.00036 38.5 3.8 34 243-276 212-245 (628)
403 PF13481 AAA_25: AAA domain; P 50.9 25 0.00054 30.9 4.5 53 210-263 128-184 (193)
404 COG0352 ThiE Thiamine monophos 50.6 38 0.00082 30.6 5.5 88 211-310 24-115 (211)
405 COG0616 SppA Periplasmic serin 50.2 36 0.00078 33.0 5.7 58 210-268 81-140 (317)
406 PF12138 Spherulin4: Spherulat 48.6 45 0.00098 31.1 5.9 52 211-262 18-71 (253)
407 PRK04148 hypothetical protein; 48.1 1.6E+02 0.0035 24.5 9.5 22 242-263 86-107 (134)
408 PF02571 CbiJ: Precorrin-6x re 47.8 1.4E+02 0.003 27.9 8.9 96 134-263 2-98 (249)
409 PF13167 GTP-bdg_N: GTP-bindin 47.5 99 0.0022 24.0 6.6 57 210-266 9-66 (95)
410 KOG0368 Acetyl-CoA carboxylase 45.9 1.3E+02 0.0028 35.2 9.4 94 132-272 54-147 (2196)
411 COG4799 Acetyl-CoA carboxylase 43.8 1.6E+02 0.0035 30.5 9.3 84 223-311 323-421 (526)
412 PF00926 DHBP_synthase: 3,4-di 43.6 60 0.0013 28.9 5.6 37 222-263 150-186 (194)
413 cd08071 MPN_DUF2466 Mov34/MPN/ 43.3 71 0.0015 25.6 5.5 47 212-262 50-99 (113)
414 TIGR00506 ribB 3,4-dihydroxy-2 41.8 74 0.0016 28.4 5.8 35 224-263 157-191 (199)
415 PRK00910 ribB 3,4-dihydroxy-2- 41.7 98 0.0021 28.1 6.7 35 224-263 168-202 (218)
416 PRK00014 ribB 3,4-dihydroxy-2- 41.0 1E+02 0.0022 28.2 6.6 35 224-263 172-206 (230)
417 cd01121 Sms Sms (bacterial rad 40.5 54 0.0012 32.6 5.3 57 205-263 141-205 (372)
418 COG1066 Sms Predicted ATP-depe 40.4 61 0.0013 32.4 5.5 57 205-263 151-215 (456)
419 COG2870 RfaE ADP-heptose synth 40.2 48 0.001 32.9 4.7 50 210-265 129-178 (467)
420 KOG0353 ATP-dependent DNA heli 39.0 2.2E+02 0.0048 28.0 8.8 52 211-268 173-226 (695)
421 KOG2433 Uncharacterized conser 38.0 1.4E+02 0.003 29.5 7.3 62 92-155 434-498 (577)
422 TIGR01305 GMP_reduct_1 guanosi 37.3 2.5E+02 0.0055 27.3 9.0 80 210-297 160-246 (343)
423 COG3870 Uncharacterized protei 36.3 1.7E+02 0.0036 22.8 6.1 49 394-447 12-69 (109)
424 PRK01792 ribB 3,4-dihydroxy-2- 36.2 1.2E+02 0.0027 27.4 6.4 35 224-263 167-201 (214)
425 PRK13602 putative ribosomal pr 35.6 1.4E+02 0.003 22.3 5.7 45 211-265 16-60 (82)
426 cd01840 SGNH_hydrolase_yrhL_li 35.1 1E+02 0.0022 25.8 5.6 50 211-264 66-115 (150)
427 PRK10785 maltodextrin glucosid 34.0 72 0.0016 34.0 5.4 60 210-269 177-250 (598)
428 cd04915 ACT_AK-Ectoine_2 ACT d 33.9 96 0.0021 21.9 4.5 46 394-441 17-64 (66)
429 PRK11633 cell division protein 33.2 2.4E+02 0.0053 25.8 7.9 50 393-442 161-215 (226)
430 TIGR00608 radc DNA repair prot 32.8 1E+02 0.0022 28.0 5.5 47 212-262 150-199 (218)
431 TIGR00789 flhB_rel flhB C-term 32.4 37 0.00081 25.5 2.1 23 246-268 28-50 (82)
432 cd04920 ACT_AKiii-DAPDC_2 ACT 32.1 75 0.0016 22.2 3.6 46 394-441 16-61 (63)
433 cd01393 recA_like RecA is a b 32.0 1.6E+02 0.0034 26.5 6.8 55 209-263 94-164 (226)
434 PRK13601 putative L7Ae-like ri 31.7 1E+02 0.0022 23.1 4.4 47 211-267 13-59 (82)
435 PF00128 Alpha-amylase: Alpha 30.5 47 0.001 31.4 3.1 26 243-268 50-75 (316)
436 PRK03353 ribB 3,4-dihydroxy-2- 30.5 1.1E+02 0.0024 27.8 5.2 35 224-263 167-201 (217)
437 PF03652 UPF0081: Uncharacteri 30.3 1.8E+02 0.0038 24.2 6.1 57 210-268 39-98 (135)
438 PRK00024 hypothetical protein; 30.1 1.2E+02 0.0025 27.8 5.4 47 212-262 156-205 (224)
439 PF02844 GARS_N: Phosphoribosy 30.0 2.2E+02 0.0047 22.4 6.1 44 207-262 47-90 (100)
440 TIGR00355 purH phosphoribosyla 29.7 90 0.002 32.1 4.9 39 212-263 465-503 (511)
441 PRK05096 guanosine 5'-monophos 29.1 3.3E+02 0.0072 26.6 8.4 55 210-265 161-220 (346)
442 PRK08057 cobalt-precorrin-6x r 28.9 4.2E+02 0.0091 24.6 9.0 95 133-263 3-97 (248)
443 cd01123 Rad51_DMC1_radA Rad51_ 28.6 92 0.002 28.3 4.6 40 224-263 115-165 (235)
444 PF06153 DUF970: Protein of un 28.5 70 0.0015 25.5 3.1 49 394-447 12-69 (109)
445 PRK01018 50S ribosomal protein 27.8 1.9E+02 0.0042 22.4 5.6 42 212-263 22-63 (99)
446 COG1707 ACT domain-containing 27.8 3.9E+02 0.0084 23.1 7.5 34 224-264 141-174 (218)
447 PRK09314 bifunctional 3,4-dihy 27.0 89 0.0019 30.5 4.2 35 224-263 156-190 (339)
448 TIGR00160 MGSA methylglyoxal s 26.8 1.1E+02 0.0025 25.6 4.2 52 212-270 63-116 (143)
449 cd01169 HMPP_kinase 4-amino-5- 26.8 2E+02 0.0044 26.1 6.6 51 210-268 52-105 (242)
450 cd04937 ACT_AKi-DapG-BS_2 ACT 26.3 1.2E+02 0.0026 21.0 3.9 47 394-442 17-63 (64)
451 cd00984 DnaB_C DnaB helicase C 25.9 1.5E+02 0.0033 26.9 5.6 54 210-263 107-168 (242)
452 PRK06683 hypothetical protein; 25.9 1.5E+02 0.0033 22.1 4.5 50 211-270 16-65 (82)
453 COG0138 PurH AICAR transformyl 25.8 1.3E+02 0.0028 30.7 5.1 39 212-263 469-507 (515)
454 PLN03244 alpha-amylase; Provis 25.6 91 0.002 34.1 4.3 31 243-273 439-469 (872)
455 PRK11823 DNA repair protein Ra 25.6 1.1E+02 0.0023 31.4 4.8 53 209-263 143-203 (446)
456 TIGR00416 sms DNA repair prote 25.6 1.4E+02 0.003 30.6 5.6 55 206-262 154-216 (454)
457 smart00545 JmjN Small domain f 25.5 80 0.0017 20.3 2.4 21 243-263 15-35 (42)
458 PF02677 DUF208: Uncharacteriz 24.9 2E+02 0.0044 25.1 5.6 45 217-268 17-64 (176)
459 PF06406 StbA: StbA protein; 24.9 1.9E+02 0.0041 28.0 6.2 38 131-176 272-309 (318)
460 COG0514 RecQ Superfamily II DN 24.9 1.3E+02 0.0028 31.8 5.2 69 223-312 106-181 (590)
461 PF07905 PucR: Purine cataboli 24.8 2E+02 0.0043 23.3 5.4 47 210-263 57-104 (123)
462 PRK07106 5-aminoimidazole-4-ca 24.4 1.5E+02 0.0032 29.4 5.1 44 205-263 339-382 (390)
463 COG4294 Uve UV damage repair e 24.4 6.3E+02 0.014 24.2 10.8 102 131-268 135-240 (347)
464 TIGR03573 WbuX N-acetyl sugar 24.3 6.7E+02 0.015 24.5 11.6 23 245-267 147-169 (343)
465 KOG2865 NADH:ubiquinone oxidor 24.3 4.4E+02 0.0095 25.2 7.9 99 134-259 64-169 (391)
466 COG1891 Uncharacterized protei 24.2 4.9E+02 0.011 22.8 11.3 66 88-153 33-106 (235)
467 TIGR03853 matur_matur probable 24.2 1.3E+02 0.0027 22.3 3.6 32 118-149 19-50 (77)
468 PF02603 Hpr_kinase_N: HPr Ser 24.1 63 0.0014 26.5 2.3 39 213-264 73-111 (127)
469 PRK09461 ansA cytoplasmic aspa 24.1 2.2E+02 0.0048 27.8 6.5 54 210-270 222-275 (335)
470 COG2159 Predicted metal-depend 24.0 2.1E+02 0.0045 27.3 6.2 53 211-271 115-167 (293)
471 COG2081 Predicted flavoprotein 24.0 4.2E+02 0.009 26.6 8.2 58 210-274 80-141 (408)
472 PRK05773 3,4-dihydroxy-2-butan 23.8 1.1E+02 0.0024 27.7 4.0 34 224-263 176-209 (219)
473 cd01018 ZntC Metal binding pro 23.8 6E+02 0.013 23.7 9.6 41 210-263 205-245 (266)
474 TIGR03772 anch_rpt_subst ancho 23.7 2.8E+02 0.0061 28.6 7.3 117 120-263 325-450 (479)
475 cd01827 sialate_O-acetylestera 23.5 1.3E+02 0.0028 26.0 4.5 52 211-262 95-152 (188)
476 PRK08883 ribulose-phosphate 3- 23.3 5.6E+02 0.012 23.2 13.9 51 210-264 118-173 (220)
477 PF03796 DnaB_C: DnaB-like hel 23.3 2.2E+02 0.0047 26.4 6.1 54 210-263 113-175 (259)
478 KOG3974 Predicted sugar kinase 23.2 1.2E+02 0.0025 28.4 3.9 49 210-265 91-139 (306)
479 TIGR02402 trehalose_TreZ malto 23.2 97 0.0021 32.6 4.1 31 243-273 158-188 (542)
480 PRK10812 putative DNAse; Provi 23.1 6.1E+02 0.013 23.7 9.1 95 131-264 33-130 (265)
481 PF13872 AAA_34: P-loop contai 22.7 60 0.0013 31.0 2.1 26 243-268 157-183 (303)
482 PRK00881 purH bifunctional pho 22.7 1.7E+02 0.0037 30.3 5.5 40 211-263 466-505 (513)
483 PRK08535 translation initiatio 22.1 7.1E+02 0.015 23.9 10.0 138 94-263 86-227 (310)
484 PLN02672 methionine S-methyltr 22.1 6.5E+02 0.014 29.1 10.3 50 212-267 517-566 (1082)
485 PRK09441 cytoplasmic alpha-amy 21.9 91 0.002 32.2 3.5 28 243-270 79-106 (479)
486 cd01821 Rhamnogalacturan_acety 21.7 1.9E+02 0.0041 25.3 5.2 50 211-262 96-150 (198)
487 PF07071 DUF1341: Protein of u 21.7 67 0.0015 28.5 2.1 24 245-268 189-212 (218)
488 cd01016 TroA Metal binding pro 21.5 2.7E+02 0.0058 26.3 6.4 43 210-262 198-240 (276)
489 TIGR03581 EF_0839 conserved hy 21.5 1.2E+02 0.0027 27.3 3.7 27 243-269 187-213 (236)
490 TIGR00511 ribulose_e2b2 ribose 21.4 7.3E+02 0.016 23.8 10.2 117 120-263 103-222 (301)
491 PF13380 CoA_binding_2: CoA bi 21.3 2E+02 0.0043 23.1 4.7 42 211-266 69-110 (116)
492 PF13401 AAA_22: AAA domain; P 21.3 1E+02 0.0022 24.7 3.1 26 243-268 72-98 (131)
493 PF03460 NIR_SIR_ferr: Nitrite 21.0 60 0.0013 23.1 1.4 24 234-259 15-38 (69)
494 PRK10949 protease 4; Provision 21.0 1.6E+02 0.0034 31.6 5.1 48 212-263 354-401 (618)
495 PF13378 MR_MLE_C: Enolase C-t 20.9 1.4E+02 0.003 23.4 3.7 48 210-265 6-53 (111)
496 PRK05583 ribosomal protein L7A 20.9 3E+02 0.0066 21.6 5.5 43 211-263 22-64 (104)
497 PRK13789 phosphoribosylamine-- 20.8 4.6E+02 0.0099 26.6 8.2 44 207-262 53-96 (426)
498 PF01248 Ribosomal_L7Ae: Ribos 20.7 3E+02 0.0065 20.8 5.5 46 211-266 20-66 (95)
499 PF13727 CoA_binding_3: CoA-bi 20.5 1.8E+02 0.0038 24.6 4.7 43 210-262 129-172 (175)
500 cd01020 TroA_b Metal binding p 20.4 1.6E+02 0.0035 27.5 4.6 43 210-262 194-236 (264)
No 1
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.7e-86 Score=622.87 Aligned_cols=395 Identities=43% Similarity=0.728 Sum_probs=378.2
Q ss_pred chHHHHHHHhhhcccCCCCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCC
Q 012138 38 SSQQLINLEYEYSAHNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYND 117 (470)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~ 117 (470)
++...++...+|..+.|.+.|+++++|+|+|+||.+|++||||.+|++++++||+||.+++++.+|++++.+.++.|+++
T Consensus 5 ~~~~~~~~~~~~~~~~Y~~~~~~~~~G~G~~v~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~~~~ 84 (404)
T COG4992 5 LTAATIELFMKYLMPTYGRLPVVIVRGEGAYVWDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLFYNE 84 (404)
T ss_pred cHHHHHHHHHHhhhcccCcCceeEEeccccEEECCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcccccCCh
Confidence 45677888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhhhhC-CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCC
Q 012138 118 KFPVFAERLTSMFG-YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGF 196 (470)
Q Consensus 118 ~~~~l~~~l~~~~~-~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 196 (470)
...+|+++|++..+ .++|+|+|||+||||.|+|++|+|+. ++++.+||++.++|||+|++++++++++.++.+|
T Consensus 85 ~~~~la~~L~~~s~~~d~vff~NSGaEA~EaAiKlARk~~~-----~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F 159 (404)
T COG4992 85 PQAELAEKLVELSPFADRVFFCNSGAEANEAALKLARKYTG-----DPEKSKIIAFENSFHGRTLGALSATGQPKYRKGF 159 (404)
T ss_pred HHHHHHHHHHhhCccccEEEEcCCcHHHHHHHHHHHHHHcC-----CCCCcEEEEEcCCcCCccceeeeccCChhhccCC
Confidence 99999999999996 99999999999999999999999865 2457799999999999999999999999999999
Q ss_pred CCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCc
Q 012138 197 GPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM 276 (470)
Q Consensus 197 ~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~ 276 (470)
.|+.+++..+||||++++++++++ +|++||+||||+++|++.|+++|+++++++|++||++||.||||+|+||||++
T Consensus 160 ~Pl~~g~~~vpfnDi~al~~ai~~---~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~ 236 (404)
T COG4992 160 GPLLPGFRHVPFNDIEALEAAIDE---DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKL 236 (404)
T ss_pred CCCCCCceecCCCCHHHHHHHhcc---CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchH
Confidence 999999999999999999999998 89999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 012138 277 LASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEE 356 (470)
Q Consensus 277 ~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~ 356 (470)
|+++++++.|||++++|++|||+ |+|++++++.+.+.+.++.|++||++||++|+++.++|+.+.++++.+++++++++
T Consensus 237 fA~e~~gV~PDI~tlaK~LgGG~-PigA~la~~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~e~ll~~v~~~g~~ 315 (404)
T COG4992 237 FAYEHYGVEPDILTLAKALGGGF-PIGAMLATEEIASAFTPGDHGSTFGGNPLACAVALAVLEVLLEEGLLENVREKGEY 315 (404)
T ss_pred HHHHHhCCCCCEEEeeccccCCc-cceeeEEchhhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcchhHHHHHHHHHHH
Confidence 99999999999999999999997 99999999888899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHH
Q 012138 357 LRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKA 436 (470)
Q Consensus 357 l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~ 436 (470)
|+++|+++..+|| .+..+||.|+|+++++..+. .+.++++.|+++||++.+.+++++||.||+.+|+|||++++++
T Consensus 316 ~~~~L~~l~~~~~-~v~~vRG~GLmiGiel~~~~---~a~~~~~~~~~~gvL~~~a~~~ViR~~PpL~i~~eei~~~~~~ 391 (404)
T COG4992 316 LLQRLRELKRRYP-LVKEVRGRGLMIGIELKEPY---RARDIVRALREEGVLVLPAGPNVIRFLPPLVITEEEIDEALDA 391 (404)
T ss_pred HHHHHHHHhhcCC-ceeeeecceeEEEEEecCcc---cHHHHHHHHHHCCeEEecCCCCeEEecCCccCCHHHHHHHHHH
Confidence 9999999999997 89999999999999998753 5789999999999999999999999999999999999999999
Q ss_pred HHHHHhcccC
Q 012138 437 LHDVLELDLP 446 (470)
Q Consensus 437 l~~~l~~~~~ 446 (470)
|+++++ ...
T Consensus 392 l~~~l~-~~~ 400 (404)
T COG4992 392 LERALA-AAS 400 (404)
T ss_pred HHHHHH-Hhh
Confidence 999998 653
No 2
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-83 Score=577.83 Aligned_cols=405 Identities=64% Similarity=1.064 Sum_probs=390.6
Q ss_pred CCchHHHHHHHhhhcccCCCCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCC
Q 012138 36 SSSSQQLINLEYEYSAHNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFY 115 (470)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~ 115 (470)
+..|++.++.+.+|.+|+|.|+|+++.+++|+++||.+|++|+||.++|++.+.||+||.|.+++++|++++..+++.++
T Consensus 20 ~~aS~~~~~~E~k~~ahnyhpLpvvf~ka~g~~vwD~eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kLtlssrafY 99 (427)
T KOG1402|consen 20 TTASQQIMERENKYGAHNYHPLPVVFSKAKGSRVWDPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLTLSSRAFY 99 (427)
T ss_pred ccchhhhhchhhhcccccCCcCceEEEecCCcEEECCCccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhhhhhHHHh
Confidence 34578899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccC
Q 012138 116 NDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRG 195 (470)
Q Consensus 116 ~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~ 195 (470)
++...++++.+.++++.+.++.+|+|.||+|.|++++|+|+|..|++|.++.+|++..++|||+|.++++++.++....+
T Consensus 100 nd~~~~f~~~vt~lf~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~ 179 (427)
T KOG1402|consen 100 NDVLGEFAEYVTKLFGYDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDG 179 (427)
T ss_pred hhhHHHHHHHHHHhcCcceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999989999
Q ss_pred CCCCCCC-eeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccC
Q 012138 196 FGPLLPG-HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG 274 (470)
Q Consensus 196 ~~~~~~~-~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G 274 (470)
|+|+.|+ +..+||+|.++|+.++++ +++++|++||+|++.|++.|+++||++++++|++|++++|.||+|+|++|+|
T Consensus 180 fgp~~P~~~~~v~Y~d~eale~~l~~--~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTG 257 (427)
T KOG1402|consen 180 FGPFLPGVVDKVPYGDAEALEVALKS--PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTG 257 (427)
T ss_pred cCCCCCCcceeeccCCHHHHHHHhcC--CCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccC
Confidence 9999998 899999999999999988 4899999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 012138 275 RMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLG 354 (470)
Q Consensus 275 ~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~ 354 (470)
+++++++.++.||++.|+|+++||++|++++++++++|..+.++.|++||++||++|+++.|+|+++.++++.++.+.++
T Consensus 258 k~la~d~env~PDivilgKalSGG~~Pvsavl~~~~im~~~~pgeHgsTyggNpLg~~vaiAalevi~eekL~era~~lG 337 (427)
T KOG1402|consen 258 KLLACDYENVRPDIVILGKALSGGVYPVSAVLADDDIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIVEEKLVERAAKLG 337 (427)
T ss_pred cEEEeehhhcCCCeEEEeccccCCeeeeEEEEecHHHHhccCCCccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC-chhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHH
Q 012138 355 EELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEG 433 (470)
Q Consensus 355 ~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~ 433 (470)
..|+.+|.+++.++|..+..+|++|++.++.+..... +.+++++|-.|+++|++..|.+++.+||+||++++++|+++.
T Consensus 338 ~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAkptH~~IiRfaPPL~I~e~dl~eg 417 (427)
T KOG1402|consen 338 EILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKTSGQDAWDVCLALKENGLLAKPTHGNIIRFAPPLVISEEDLREG 417 (427)
T ss_pred HHHHHHHHhccccccchhheeeccceEEEEEeccccccchhHHHHHHcccccccccCCCCCCeEEecCCcccCHHHHHHH
Confidence 9999999999999988899999999999999875443 468999999999999999999999999999999999999999
Q ss_pred HHHHHHHHh
Q 012138 434 SKALHDVLE 442 (470)
Q Consensus 434 ~~~l~~~l~ 442 (470)
+++|.+++.
T Consensus 418 ~e~i~k~i~ 426 (427)
T KOG1402|consen 418 IEAIEKTIA 426 (427)
T ss_pred HHHHHHHhc
Confidence 999998874
No 3
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=100.00 E-value=7.8e-75 Score=564.79 Aligned_cols=400 Identities=41% Similarity=0.704 Sum_probs=360.4
Q ss_pred CCCCchHHHHHHHhhhcccCCCC--CceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccC
Q 012138 34 PSSSSSQQLINLEYEYSAHNYHP--VPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSS 111 (470)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~ 111 (470)
.+.+...+++++++++..+.+.. +|+++++++|+|+||.|||+||||.++.++.++||+||+|++|+.+|++++.+..
T Consensus 13 ~~~~~~~~~~~r~~~~~~r~~~~~~~p~~~~ra~G~~l~DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~ 92 (447)
T COG0160 13 APGPKALELIERREEALARSYGRFRFPLVIVRAEGAYLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTH 92 (447)
T ss_pred CCCcchHHHHHHHHHHhccccccccCcceEEecccCEEEeCCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhccc
Confidence 34566778899988888877655 7999999999999999999999999999999999999999999999999998665
Q ss_pred CCC-CCCcHHHHHHHHhhhhC---CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhccc
Q 012138 112 RAF-YNDKFPVFAERLTSMFG---YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMS 187 (470)
Q Consensus 112 ~~~-~~~~~~~l~~~l~~~~~---~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~ 187 (470)
..+ +.+...+++++|.+..+ .++++|++||+|||++|+|+++.++ |+..||+|.++|||+|.++++++
T Consensus 93 ~~~~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiKiAr~~T--------gr~~viaf~~afHG~T~galslT 164 (447)
T COG0160 93 TRDLYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYT--------GRPGVIAFDGAFHGRTLGALSLT 164 (447)
T ss_pred CCcccchhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHHHHHHHh--------CCCcEEEECCcccccchhhHHhc
Confidence 444 44889999999999874 5789999999999999999999873 67799999999999999999999
Q ss_pred CCccc-ccCCCCCCCCeeeecCCC-----------------HHHHHHHHHhc---CCCeEEEEEccccCCCccccCChhh
Q 012138 188 CDNEA-IRGFGPLLPGHLKVDFGD-----------------ITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGY 246 (470)
Q Consensus 188 ~~~~~-~~~~~~~~~~~~~~~~~d-----------------~~~Le~~l~~~---~~~~~~vi~epi~n~~G~~~~~~~~ 246 (470)
+.... +..|.++.+++..+||++ .+.+++.+... +.++++||+||+|+++|.+.||++|
T Consensus 165 ~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~f 244 (447)
T COG0160 165 GSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGF 244 (447)
T ss_pred cCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHH
Confidence 87544 466888888888888753 23455544432 3579999999999999999999999
Q ss_pred HHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcCCccCCCCC
Q 012138 247 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGG 326 (470)
Q Consensus 247 l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~ 326 (470)
+++|+++|++||+++|+||||+||||||++|+++++|+.||++|+||++++|+ |+|++++++++++ ..++.+++||++
T Consensus 245 l~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt~aK~ig~G~-Pl~avv~r~ei~~-~~~g~~~~Tf~G 322 (447)
T COG0160 245 LKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLAKSLGGGL-PLSAVVGRAEIMD-WPPGGHGGTFGG 322 (447)
T ss_pred HHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEEEecccccCCC-ceeEEeccHHhcc-cCCcccCCCCCc
Confidence 99999999999999999999999999999999999999999999999999998 9999999999999 778899999999
Q ss_pred CHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC-----chhHHHHHHH
Q 012138 327 NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-----PVSAYDICLK 401 (470)
Q Consensus 327 ~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~-----~~~~~~~~~~ 401 (470)
||++|+++.++|+.++++++.+++.+++++++++|.+++.++| .+.++||.|+|+++++..+.. ......++++
T Consensus 323 Npva~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~-~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~ 401 (447)
T COG0160 323 NPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHP-LIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVAR 401 (447)
T ss_pred CHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcC-ceecccccceEEEEEEecCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999997 999999999999999986421 3467889999
Q ss_pred HHHcCceeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 402 MKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 402 l~~~Gv~~~~~~--~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
|+++|+++..++ .+++||.||+++|+|++|+++++|+++|+ +.
T Consensus 402 ~~~~Glil~~~G~~~nviRi~PPL~is~e~~d~~l~il~~al~-~~ 446 (447)
T COG0160 402 AFERGLLLLTCGPHGNVLRILPPLTISDEELDEGLDILEEALK-EA 446 (447)
T ss_pred HHHcCCEEeccCCCCcEEEEeCCcccCHHHHHHHHHHHHHHHH-hh
Confidence 999999998887 89999999999999999999999999998 54
No 4
>PLN02624 ornithine-delta-aminotransferase
Probab=100.00 E-value=3.5e-69 Score=547.25 Aligned_cols=467 Identities=78% Similarity=1.229 Sum_probs=400.5
Q ss_pred ccccccchhhhhHhhhcccCCCCCCCCCCCCC--CCCchHHHHHHHhhhcccCCCCCceEEEeecCCEEEeCCCCeEEec
Q 012138 3 SMGATRRNLHCLLSRVCRKRSYGAQPQGGTSP--SSSSSQQLINLEYEYSAHNYHPVPIVFSQAKGSSIWDPEGNKYLDF 80 (470)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~d~~G~~~lD~ 80 (470)
||-.+++-+..+.++.|+..+..-...+.... .+..++++++.+++|..+.|.+.|+++++++|+|+||.||++||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~G~~l~d~dG~~ylD~ 80 (474)
T PLN02624 1 SMALARRLLQRLARRSRRLRRRSYGALPEGSAPSLSDSSAHLIELEEKYSAHNYHPIPVVFSRAKGSRIWDPEGKKYLDF 80 (474)
T ss_pred CcchhhhHHHHHHHHHHHhhccccccCCCCCCCCCCcchHHHHHHHHHhhccccCCCCceEEeeeeCEEEECCCCEEEEc
Confidence 34456666667777777643222221111111 2345678999988888887778899999999999999999999999
Q ss_pred cCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcc
Q 012138 81 LSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKK 160 (470)
Q Consensus 81 ~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~ 160 (470)
.+++++.++||+||+|++++.++++++.+.+..+.++...+++++|+++++.++++|++||+||++.|+++++.|+++++
T Consensus 81 ~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~AlklAr~~~~~~~ 160 (474)
T PLN02624 81 LSAYSAVNQGHCHPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMFGYDMVLPMNTGAEGVETAIKLARKWGYEKK 160 (474)
T ss_pred ccchhcccCCCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhcCCCeEEEeCChHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999887766677888999999999999999999999999999999999999877776
Q ss_pred cCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccc
Q 012138 161 KFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVI 240 (470)
Q Consensus 161 ~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~ 240 (470)
|.++++..|+.+.++|||++.+++++++++..+..|.|..+++..++|+|++.++++++.+++++++|++||++|++|.+
T Consensus 161 g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v 240 (474)
T PLN02624 161 GIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFGDLDALEKIFEEDGDRIAAFLFEPIQGEAGVV 240 (474)
T ss_pred CCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCCCHHHHHHHHHhCCCCEEEEEECCccCCCCCc
Confidence 66556778999999999999999999988878888888888889999999999999998766789999999999999999
Q ss_pred cCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcCCc
Q 012138 241 IPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEH 320 (470)
Q Consensus 241 ~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~ 320 (470)
+|+++|+++|+++|++||++||+||+|+|||++|.+++++++++.||+++|||++++|++|+|++++++++++.+.+..+
T Consensus 241 ~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pDiv~lsK~lggG~~pigav~~~~~i~~~~~~~~~ 320 (474)
T PLN02624 241 IPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPDVVILGKALGGGVIPVSAVLADKDVMLCIKPGEH 320 (474)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCCEEEecccccCCCCcceeeeecHHHHhHhccCCc
Confidence 98899999999999999999999999999999999988888899999999999999884499999999999998877788
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC-chhHHHHH
Q 012138 321 GSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-PVSAYDIC 399 (470)
Q Consensus 321 ~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~ 399 (470)
++||++++++++++.++|+.++++++.+++.++++++++.|+++..++|..+..+++.|+++.+.++.+.. ...+.+++
T Consensus 321 ~~T~~g~pl~~aaa~aaLe~l~~~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~l~~~~~~~~~a~~~~ 400 (474)
T PLN02624 321 GSTFGGNPLASAVAMAALQVVQDEKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLLNAVVLNSPKLGPVSAYDVC 400 (474)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeEEEEEEEecCCCcChHHHHHHH
Confidence 89999999999999999999988889999999999999999999877765577889999999998864321 12467899
Q ss_pred HHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccCCCCC---CCCCCCCCCCCcccccccC
Q 012138 400 LKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRK---PKPADAPATPCHRCGRNLY 469 (470)
Q Consensus 400 ~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 469 (470)
+.|+++||++.|.+.+++||+||+.+|+++|++++++|++++...+..+++ .+......++|+|||++.|
T Consensus 401 ~~L~e~GV~v~p~~~~~lR~~p~l~~t~e~id~~l~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (474)
T PLN02624 401 LKLKERGLLAKPTHDTIIRLAPPLSISEDELQECSKALSDVLEHDLPKLQSAKKEKTPKAAPTPCDRCGRNLY 473 (474)
T ss_pred HHHHhCCeEEecCCCCEEEEECCccCCHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCCCChhhhhhhhcc
Confidence 999999999999888999999999999999999999999998722333433 2223335789999999988
No 5
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=8.4e-69 Score=518.71 Aligned_cols=398 Identities=35% Similarity=0.583 Sum_probs=349.8
Q ss_pred HHHHhhhcccCCCC------CceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccC-CCCC
Q 012138 43 INLEYEYSAHNYHP------VPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSS-RAFY 115 (470)
Q Consensus 43 ~~~~~~~~~~~~~~------~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-~~~~ 115 (470)
++.+++|.+|.|.. .|.++++++|.|+||.+||+|||..+++|.++.||+||++.+|+.+|++++.+.. ..+.
T Consensus 6 ~~~d~~~~whP~t~~~~~~~~~~~i~~aeG~yl~d~~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t 85 (449)
T COG0161 6 LAADLSHLWHPFTQMRDPLAEPRVIVRAEGVYLTDIDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGFT 85 (449)
T ss_pred hhhhhhheeccccccccccccceeeeecceeEEEeCCCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhcccC
Confidence 33477888886531 2789999999999999999999999999999999999999999999999998874 3456
Q ss_pred CCcHHHHHHHHhhhhC---CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCccc
Q 012138 116 NDKFPVFAERLTSMFG---YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEA 192 (470)
Q Consensus 116 ~~~~~~l~~~l~~~~~---~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~ 192 (470)
+++..+|+++|+++.+ +++|||++|||+|++.|+|+++.|+ ..+|.|. ++++|+...+|||.|.+++++++....
T Consensus 86 ~~Pa~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~-~~~G~p~-r~~~Isr~~gYHG~T~ga~Sv~g~~~~ 163 (449)
T COG0161 86 HEPAIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYW-RARGQPQ-RKKFISRRNGYHGDTLGAMSVGGPVAL 163 (449)
T ss_pred CchHHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHH-HhcCCCc-ceEEEEeccCcCcccchheeccCchhh
Confidence 7779999999999986 8899999999999999999999874 4455544 678999999999999999999995444
Q ss_pred c-cCCCCCCCCeeeecCC-----------------CHHHHHHHHHhcC-CCeEEEEEccccCC-CccccCChhhHHHHHH
Q 012138 193 I-RGFGPLLPGHLKVDFG-----------------DITALEKIFKESG-DQIAGFLFEPIQGE-AGVIIPPDGYLKAVRD 252 (470)
Q Consensus 193 ~-~~~~~~~~~~~~~~~~-----------------d~~~Le~~l~~~~-~~~~~vi~epi~n~-~G~~~~~~~~l~~l~~ 252 (470)
+ ..|.++.+++.+++.+ +.++||++|.+++ +++++||+||+.+. +|.++|++.|++++++
T Consensus 164 ~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~ 243 (449)
T COG0161 164 RHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVRE 243 (449)
T ss_pred hhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHH
Confidence 4 5555566654444322 2577899998887 79999999997666 9999999999999999
Q ss_pred HHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcC-----CccCCCCCC
Q 012138 253 LCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG-----EHGSTFGGN 327 (470)
Q Consensus 253 l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~-----~~~~t~~~~ 327 (470)
+|++|||+||+|||.+||||||++|+++++++.||+++++|+++|||+|+|++++++++.+.+... .|+.||++|
T Consensus 244 iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TYsgh 323 (449)
T COG0161 244 ICDKYGILLIADEVATGFGRTGKMFACEHAGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTYSGN 323 (449)
T ss_pred HHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCeeeecccccccchhhHhHhhhHHHHHHHhcccCCeeccCCccccC
Confidence 999999999999999999999999999999999999999999999999999999999999888653 689999999
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCc------hhHHHHHHH
Q 012138 328 PLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP------VSAYDICLK 401 (470)
Q Consensus 328 ~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~------~~~~~~~~~ 401 (470)
|++||+|++.|++++++++.+++++++.+|.+.|+++...+| .+.++|+.|++.++++..+... .....+.+.
T Consensus 324 PlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p-~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~ 402 (449)
T COG0161 324 PLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHP-LVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAA 402 (449)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCC-cEEEeeccceEEEEEEecccccccchhhhHHHHHHHH
Confidence 999999999999999999999999999999999998544444 8999999999999999776521 126688889
Q ss_pred HHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 402 MKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 402 l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
++++|++++|. ++.+-++||+++|++||+++++++.++++ +.
T Consensus 403 ~~e~Gl~iRp~-g~~i~~~PPliit~~eid~l~~~l~~al~-~~ 444 (449)
T COG0161 403 ALERGLLIRPL-GDVIYLMPPLIITREEIDELVDALREALD-ET 444 (449)
T ss_pred HHHCCeEEeec-CCEEEEcCCccCCHHHHHHHHHHHHHHHH-HH
Confidence 99999999998 66999999999999999999999999998 54
No 6
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=100.00 E-value=1.2e-66 Score=520.62 Aligned_cols=376 Identities=36% Similarity=0.656 Sum_probs=339.1
Q ss_pred ceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhC--CCeE
Q 012138 58 PIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFG--YDMV 135 (470)
Q Consensus 58 p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~v 135 (470)
+++++++.|+|+||.||++||||.+++++.++||+||+|.+++.+|++++.+.+..+.++...+++++|++..+ .+++
T Consensus 58 ~~~~~~~~g~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v 137 (442)
T TIGR03372 58 AVEWQAGGLNTLIDTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHSQELLDPLRALLAKTLAALTPGKLKYS 137 (442)
T ss_pred eeEEEeCCeeEEEECCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCcccccCCHHHHHHHHHHHHhCCCCcCEE
Confidence 34566777799999999999999999999999999999999999999988776655668888999999999874 4789
Q ss_pred EecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHH
Q 012138 136 LPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALE 215 (470)
Q Consensus 136 ~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le 215 (470)
+|+|||+||++.|+|+++.|+.. .|+..||++.++|||++.+++++++.+.++..|.|+.+++..+|++|.++++
T Consensus 138 ~f~~SGsEA~e~AlklAr~~t~~-----~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~ 212 (442)
T TIGR03372 138 FFCNSGTESVEAALKLAKAYQSP-----RGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAML 212 (442)
T ss_pred EEeCCchHHHHHHHHHHHHHHhh-----cCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHH
Confidence 99999999999999999986321 2567899999999999999999998877778888888889999999999998
Q ss_pred HHHHh---cCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecc
Q 012138 216 KIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG 292 (470)
Q Consensus 216 ~~l~~---~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~s 292 (470)
+.+++ +++++++||+||+++.+|.+.|+++|+++++++|++||+++|+||||+||||+|++|+++++++.||++++|
T Consensus 213 ~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~g 292 (442)
T TIGR03372 213 KALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILCLA 292 (442)
T ss_pred HHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCeeeeh
Confidence 88864 345899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcceeEEEecHHHHhhc--CcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCC
Q 012138 293 KALGGGVIPVSAVLADKEVMLCI--QPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPN 370 (470)
Q Consensus 293 K~l~gG~~~ig~v~~~~~~~~~~--~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~ 370 (470)
|+++||++|+|++++++++++.+ .+..+++||++||++|+++.++|+.++++++.++++++++++++.|+++..++|.
T Consensus 293 K~lg~G~~Pigavv~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~~ 372 (442)
T TIGR03372 293 KALGGGVMPIGATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAAEYPD 372 (442)
T ss_pred hhhcCCcccceEEEecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999966999999999999888 3446889999999999999999999999899999999999999999999888865
Q ss_pred ceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccC--CCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 012138 371 YVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT--HDTIVRLTPPLSISSNELQEGSKALHDVL 441 (470)
Q Consensus 371 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--~~~~iR~~~~~~~t~e~i~~~~~~l~~~l 441 (470)
.+.++++.|+|+++++..+. ....+++.|+++||++.+. ..+.+||.||+.+|++|+++++++|++++
T Consensus 373 ~i~~vRG~Gl~~giel~~~~---~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 373 LIIEARGKGLLMAIEFRDNE---IGYAFAKELFQQNILVAGTLNNAKSIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred ceEEEecceEEEEEEeCChH---HHHHHHHHHHHCCcEEeecCCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 78899999999999997653 5678999999999999754 35899999999999999999999999874
No 7
>PRK05965 hypothetical protein; Provisional
Probab=100.00 E-value=9e-67 Score=527.01 Aligned_cols=402 Identities=28% Similarity=0.455 Sum_probs=344.7
Q ss_pred hHHHHHHHhhhcccCCC-------CCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccC
Q 012138 39 SQQLINLEYEYSAHNYH-------PVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSS 111 (470)
Q Consensus 39 ~~~~~~~~~~~~~~~~~-------~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~ 111 (470)
++++++.++++.++.+. ..|+++++++|+|+||.||++||||.+++++.++||+||+|.+++.+|++++.+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~ 82 (459)
T PRK05965 3 SNSLIELDRAHLIHPVASYRGHEARGVTVLASAKGATLTDASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYAT 82 (459)
T ss_pred hHHHHHhhhhccccccccccccccCCCceEEeeeEeEEEECCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcc
Confidence 45566666666554331 23789999999999999999999999999999999999999999999999877654
Q ss_pred C--CCCCCcHHHHHHHHhhhh--CCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhccc
Q 012138 112 R--AFYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMS 187 (470)
Q Consensus 112 ~--~~~~~~~~~l~~~l~~~~--~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~ 187 (470)
. .+.++...+|+++|++.. +.++++|++||+||++.|+|+++.|+.. +| .+++.+||++.++|||++.++++++
T Consensus 83 ~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~-~g-~~~r~kii~~~~~YHG~t~~a~s~t 160 (459)
T PRK05965 83 GYFHFGSEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVDSAVRFIRHYWNA-TG-RPSKKQFISLERGYHGSSSVGAGLT 160 (459)
T ss_pred cccccCCHHHHHHHHHHHhhCCCCcCEEEEeCChhHHHHHHHHHHHHHHHh-cC-CCCccEEEEecCCcCcccHHHHHhc
Confidence 3 345777889999999987 4679999999999999999999986432 12 1356789999999999999999998
Q ss_pred CCcccccCCCCCCCCeeeecC---------CC--------HHHHHHHHHhcC-CCeEEEEEccccCCCccccCChhhHHH
Q 012138 188 CDNEAIRGFGPLLPGHLKVDF---------GD--------ITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKA 249 (470)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~---------~d--------~~~Le~~l~~~~-~~~~~vi~epi~n~~G~~~~~~~~l~~ 249 (470)
+.+.++..|.+..+....+++ +| ++++++++++++ +++++||+||+++.+|.+.|+++|+++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~ 240 (459)
T PRK05965 161 ALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKA 240 (459)
T ss_pred CCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHH
Confidence 877667777766555443332 23 257888887654 689999999999999999999999999
Q ss_pred HHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCc-------CCccC
Q 012138 250 VRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP-------GEHGS 322 (470)
Q Consensus 250 l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~-------~~~~~ 322 (470)
|+++|++||++||+|||++||||+|++|+++++++.||+++++|+++||++|+|++++++++++.+.. ..+++
T Consensus 241 lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~ 320 (459)
T PRK05965 241 MREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGY 320 (459)
T ss_pred HHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeEEechhhccCCcceeEEEEcHHHHHHHhccccccccccccC
Confidence 99999999999999999999999999999999999999999999999996699999999999988753 25889
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC---c-----hh
Q 012138 323 TFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL---P-----VS 394 (470)
Q Consensus 323 t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~---~-----~~ 394 (470)
||++||++|+++.++|++++++++.+++++++++|.++|+++. ++| .+.++++.|+++++++..+.. . ..
T Consensus 321 T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~-~~~-~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~ 398 (459)
T PRK05965 321 TYSAHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDALR-AHP-LVGDVRGRGLLGALELVADKATKTPFDAALDP 398 (459)
T ss_pred CCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhc-cCC-CEEEEeecceEEEEEEeccccccCCCCchhHH
Confidence 9999999999999999999999999999999999999999985 465 889999999999999854220 0 12
Q ss_pred HHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 395 AYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 395 ~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
...+.+.|+++||++.+.+.+++|++||+++|++||++++++|.++++ ++
T Consensus 399 ~~~i~~~~~~~Gll~~~~g~~~i~~~PpL~it~~ei~~~~~~l~~~l~-~~ 448 (459)
T PRK05965 399 ADRIFDRAYANGLVFRAFGDGVLGFAPALCCTEGEFDLIFERTRKTLD-DV 448 (459)
T ss_pred HHHHHHHHHhCCeEEEecCCcEEEEECCCcCCHHHHHHHHHHHHHHHH-HH
Confidence 457888999999999887778999999999999999999999999999 86
No 8
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-66 Score=524.39 Aligned_cols=384 Identities=35% Similarity=0.651 Sum_probs=347.9
Q ss_pred CCceEEEeecC-CEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhC--C
Q 012138 56 PVPIVFSQAKG-SSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFG--Y 132 (470)
Q Consensus 56 ~~p~~~~~~~g-~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~ 132 (470)
++|+++.+++| +|+||.||++||||.+++++.++||+||+|.+++.+|++++.+.+..+.++...+++++|++..+ .
T Consensus 62 ~~~~~~~~~~G~~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~lae~L~~~~p~~~ 141 (459)
T PRK11522 62 DYGAVEWQAGGLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKL 141 (459)
T ss_pred CCCeeEEeccCeEEEEECCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcccccccCCHHHHHHHHHHHHhCCCCC
Confidence 55789999999 99999999999999999999999999999999999999998776665678888999999999874 5
Q ss_pred CeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHH
Q 012138 133 DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDIT 212 (470)
Q Consensus 133 ~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 212 (470)
++++|+|||+||++.|+|+++.++ .+ .++..||++.++|||++.+++++++.+.++.+|.+..+++..+|++|.+
T Consensus 142 ~~v~f~~SGsEAve~AlklAr~~t--~~---~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~ 216 (459)
T PRK11522 142 KYSFFCNSGTESVEAALKLAKAYQ--SP---RGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIE 216 (459)
T ss_pred CEEEEeCCchHHHHHHHHHHHHHh--cc---CCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHH
Confidence 789999999999999999999863 21 1466899999999999999999998887888888888888999999999
Q ss_pred HHHHHHHh---cCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCccee
Q 012138 213 ALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 289 (470)
Q Consensus 213 ~Le~~l~~---~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~ 289 (470)
++++++++ +++++++||+||+++.+|.+.|+++|+++++++|++||+++|+||||+||||+|++|+++++++.||++
T Consensus 217 ~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDiv 296 (459)
T PRK11522 217 AMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDIL 296 (459)
T ss_pred HHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCCEE
Confidence 99999864 235799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccccCCCcceeEEEecHHHHhhcC--cCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhh
Q 012138 290 ILGKALGGGVIPVSAVLADKEVMLCIQ--PGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQ 367 (470)
Q Consensus 290 s~sK~l~gG~~~ig~v~~~~~~~~~~~--~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~ 367 (470)
++||+++||++|+|++++++++++.+. +..+++||++||++|+++.++|+.++++++.+++++++++|++.|+++..+
T Consensus 297 t~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~ 376 (459)
T PRK11522 297 CLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDYLLDGFRQLARE 376 (459)
T ss_pred EechhhhCCCccceeEEEcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999669999999999998774 446889999999999999999999999899999999999999999999888
Q ss_pred CCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccC--CCCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 368 FPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT--HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 368 ~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
+|..+.++++.|+++.+++..+. ....+++.|+++||++.+. +.+++||.||+.+|++||++++++|.++++ ++
T Consensus 377 ~~~~i~~VrG~Gl~~giel~~~~---~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~-~~ 452 (459)
T PRK11522 377 YPDLVQEARGKGMLMAIEFVDNE---IGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCEQVLKAARKALA-AM 452 (459)
T ss_pred CCCceeeEEeceeEEEEEecCch---HHHHHHHHHHHCCeEEEecCCCCCEEEEECCccCCHHHHHHHHHHHHHHHH-HH
Confidence 76567899999999999997643 5678999999999999765 468999999999999999999999999998 76
Q ss_pred CCC
Q 012138 446 PKM 448 (470)
Q Consensus 446 ~~~ 448 (470)
.+.
T Consensus 453 ~~~ 455 (459)
T PRK11522 453 RVS 455 (459)
T ss_pred HHh
Confidence 543
No 9
>PRK07482 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-66 Score=525.66 Aligned_cols=404 Identities=26% Similarity=0.420 Sum_probs=348.1
Q ss_pred chHHHHHHHhhhcccCCC---------CCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHcc
Q 012138 38 SSQQLINLEYEYSAHNYH---------PVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLT 108 (470)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~---------~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~ 108 (470)
+++++.+..+++.++.+. ..|+++++++|+++||.|||+||||.+++++.++||+||+|.+++.+|++++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~ 83 (461)
T PRK07482 4 KIDELLAWDRDHFFHPSTHLGDHARGELPGRIVEGGEGIRITDAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELA 83 (461)
T ss_pred cHHHHHHhhhhhccCCcccccccccccCCCeeEEeeeeeEEEECCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcC
Confidence 467777777777666553 23789999999999999999999999999999999999999999999999976
Q ss_pred ccC--CCCCCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchh
Q 012138 109 LSS--RAFYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAI 184 (470)
Q Consensus 109 ~~~--~~~~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~ 184 (470)
+.. ..+.++...+++++|++..+ .++++|++||+||++.|+|+++.|+.. ++. +++.+||++.++|||++.++.
T Consensus 84 ~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~-~g~-~~r~~Ii~~~~~YHG~t~ga~ 161 (461)
T PRK07482 84 YYHTYVGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDANETQIKLVWYYNNV-LGR-PEKKKIISRWRGYHGSGVVTG 161 (461)
T ss_pred ccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHh-cCC-CCCceEEEecCccCCccHhhh
Confidence 433 24567888999999999873 689999999999999999999986321 121 356789999999999999999
Q ss_pred cccCCcccccCCCCCCCCeeeecCC------------------CHHHHHHHHHhc-CCCeEEEEEccccCCCccccCChh
Q 012138 185 SMSCDNEAIRGFGPLLPGHLKVDFG------------------DITALEKIFKES-GDQIAGFLFEPIQGEAGVIIPPDG 245 (470)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~------------------d~~~Le~~l~~~-~~~~~~vi~epi~n~~G~~~~~~~ 245 (470)
++++.+.++..|.+..+++..++++ ++++|++++... ++++++||+||+++.+|.+.|+++
T Consensus 162 s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~ 241 (461)
T PRK07482 162 SLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAG 241 (461)
T ss_pred hccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHH
Confidence 9998777777777776665544322 357788888543 357999999999999999999999
Q ss_pred hHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCc-------C
Q 012138 246 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP-------G 318 (470)
Q Consensus 246 ~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~-------~ 318 (470)
|+++|+++|++||++||+|||++||||+|++|+++++|+.||+++++|+++||++|+|++++++++++.+.. .
T Consensus 242 yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~ 321 (461)
T PRK07482 242 YWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLITVAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAI 321 (461)
T ss_pred HHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEEEEccccccCccccceeeecHHHHHHHhcccccCCcc
Confidence 999999999999999999999999999999999999999999999999999996699999999999887752 2
Q ss_pred CccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC---c---
Q 012138 319 EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL---P--- 392 (470)
Q Consensus 319 ~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~---~--- 392 (470)
.|++||++||++|+++.++|+.++++++.+++++++++|++.|+++..++| .+.++++.|+|+++++..+.. .
T Consensus 322 ~h~~T~~gnpl~~Aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~v~~vrG~Glm~giel~~~~~~~~~~~~ 400 (461)
T PRK07482 322 GHGWTYSGHPICAAAALANLDILERENLVGNAAEVGAYFRARLRAAFGDHP-LVGEVRGVGMLAAVEFVADRDDRTPFDP 400 (461)
T ss_pred ccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCC-CEEEEeeceeEEEEEeccCCCcCCCCCh
Confidence 588999999999999999999999999999999999999999999988886 889999999999999964321 0
Q ss_pred --hhHHHHHHHHHHcCceeccC-CCCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 393 --VSAYDICLKMKERGILAKPT-HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 393 --~~~~~~~~~l~~~Gv~~~~~-~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
.....++..|+++||++.+. .++.+||.||+.+|++||++++++|+++++ ++
T Consensus 401 ~~~~~~~i~~~~~~~Gvl~~~~~~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~-~~ 455 (461)
T PRK07482 401 ALKIGPQVSAAALERGVIARAMPHGDILGFAPPLVLTRAEADEIVAIAKDAVD-EV 455 (461)
T ss_pred hhHHHHHHHHHHHHCCcEEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH-HH
Confidence 12467889999999998653 368999999999999999999999999998 65
No 10
>PRK07678 aminotransferase; Validated
Probab=100.00 E-value=5.8e-66 Score=520.56 Aligned_cols=406 Identities=30% Similarity=0.499 Sum_probs=347.8
Q ss_pred CchHHHHHHHhhhcccCC---C-CCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCC
Q 012138 37 SSSQQLINLEYEYSAHNY---H-PVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSR 112 (470)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~---~-~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~ 112 (470)
.+++++++.++++.++.+ . ..|+++++++|+|+||.|||+||||.+++++.++||+||+|.+++.+|++++.+...
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~ 84 (451)
T PRK07678 5 KQTDELLAKDEQYVWHGMKPYNPNATMVVAKAEGAWVTDIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPL 84 (451)
T ss_pred cCHHHHHHHhhcccCCCccccccCCCeeEEeeeeeEEEeCCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCcccc
Confidence 457788887777765442 2 237999999999999999999999999999999999999999999999998876555
Q ss_pred CCCCCcHHHHHHHHhhhhC-CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcc
Q 012138 113 AFYNDKFPVFAERLTSMFG-YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 191 (470)
Q Consensus 113 ~~~~~~~~~l~~~l~~~~~-~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~ 191 (470)
.+.++...+++++|++..+ .++++|++||+||++.|+|+++.|+.. +| .+++..||.+.++|||++.+++++++.+.
T Consensus 85 ~~~~~~~~~lae~l~~~~~~~~~v~f~~sGseA~e~AlklAr~~t~~-~g-~~~r~~ii~~~~~yHG~t~~als~~~~~~ 162 (451)
T PRK07678 85 TQSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYHAQ-KG-EPHRYKFISRYRAYHGNSMGALAATGQAQ 162 (451)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHh-cC-CCCCcEEEEECCCcCCccHHHhhcCCCcc
Confidence 5667788999999999875 358999999999999999999986422 12 23567899999999999999999988776
Q ss_pred cccCCCCCCCCeeeecCCC-----------------HHHHHHHHH-hcCCCeEEEEEccccCCCccccCChhhHHHHHHH
Q 012138 192 AIRGFGPLLPGHLKVDFGD-----------------ITALEKIFK-ESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDL 253 (470)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d-----------------~~~Le~~l~-~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l 253 (470)
++..|.+..+++..+++++ +++++++++ .+++++++||+||+++.+|.+.|+++|+++|+++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~l 242 (451)
T PRK07678 163 RKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEI 242 (451)
T ss_pred cccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHH
Confidence 6777777777665555432 234677775 3346899999999999999999999999999999
Q ss_pred HHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCc------CCccCCCCCC
Q 012138 254 CSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP------GEHGSTFGGN 327 (470)
Q Consensus 254 ~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~------~~~~~t~~~~ 327 (470)
|++||++||+||||+||||+|++|+++++|+.||+++++|+++||++|+|++++++++++.+.. ..+++||++|
T Consensus 243 c~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDivt~gK~lggG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gn 322 (451)
T PRK07678 243 CQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGN 322 (451)
T ss_pred HHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEEEeecccccCCcceeEEEEcHHHHHHHhccCcccccccCCCCCcC
Confidence 9999999999999999999999999999999999999999999995599999999999998864 2488999999
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC------chhHHHHHHH
Q 012138 328 PLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL------PVSAYDICLK 401 (470)
Q Consensus 328 ~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~------~~~~~~~~~~ 401 (470)
|++|+++.++|+.++++++.+++++++++|++.|+++..++| .+..+++.|+|+.+++..+.. ......++..
T Consensus 323 p~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~~~~~~~-~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~ 401 (451)
T PRK07678 323 PAACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEHP-LVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVAA 401 (451)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCC-CEEEEEeeceEEEEEEecCCcccCcCchHHHHHHHHH
Confidence 999999999999999999999999999999999988777775 788999999999999853210 1235678899
Q ss_pred HHHcCceeccC------CCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccC
Q 012138 402 MKERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 402 l~~~Gv~~~~~------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
|+++||++.+. ..+.+||+||+.+|++||++++++|.++++ +++
T Consensus 402 l~~~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~-~~~ 451 (451)
T PRK07678 402 CKEKGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALE-RIK 451 (451)
T ss_pred HHHCCcEEeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHH-hcC
Confidence 99999998753 247899999999999999999999999998 753
No 11
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.6e-65 Score=516.58 Aligned_cols=401 Identities=26% Similarity=0.423 Sum_probs=345.7
Q ss_pred hHHHHHHHhhhcccCCC-------CCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccC
Q 012138 39 SQQLINLEYEYSAHNYH-------PVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSS 111 (470)
Q Consensus 39 ~~~~~~~~~~~~~~~~~-------~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~ 111 (470)
.+++.+.++++.++.+. ..|+++++++|+++||.||++||||.+++++.++||+||+|.+++.+|++++.+..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~ 90 (453)
T PRK06943 11 TDDWVARSLRAVWHPCTQMKHHERLPLLPVARGEGAWLYDRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAM 90 (453)
T ss_pred hhhHHHHhhcccccCCcCccccccCCCceEEecccCEEEeCCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCcc
Confidence 34466666666544332 24789999999999999999999999999999999999999999999999876654
Q ss_pred C-CCCCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccC
Q 012138 112 R-AFYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 188 (470)
Q Consensus 112 ~-~~~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~ 188 (470)
. .+.++...+++++|++..+ .++++|++||+||++.|+|++++|+. .++. +++.+||.+.++|||++.+++++++
T Consensus 91 ~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~AlKlA~~~~~-~rg~-~~r~~Ii~~~~~yHG~t~gals~~~ 168 (453)
T PRK06943 91 LAGCTHEPAIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFHAWR-NRGR-GDKREFVCLANGYHGETIGALGVTD 168 (453)
T ss_pred ccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHHHHHH-HhCC-CCCCEEEEECCCcCCCcHHhhcccC
Confidence 3 3567788999999999875 46999999999999999999987632 1221 3567899999999999999999999
Q ss_pred CcccccCCCCCCCCeeeecCCC-----------------HHHHHHHHHhcCCCeEEEEEcc-ccCCCccccCChhhHHHH
Q 012138 189 DNEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKESGDQIAGFLFEP-IQGEAGVIIPPDGYLKAV 250 (470)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d-----------------~~~Le~~l~~~~~~~~~vi~ep-i~n~~G~~~~~~~~l~~l 250 (470)
...++..|.+..+++..+++++ +++++++++++++++++||+|| +++.+|.+.|+++|+++|
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~l 248 (453)
T PRK06943 169 VALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGL 248 (453)
T ss_pred ChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHH
Confidence 8777777888776655555432 4788888886667999999999 599999999999999999
Q ss_pred HHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCc------CCccCCC
Q 012138 251 RDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP------GEHGSTF 324 (470)
Q Consensus 251 ~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~------~~~~~t~ 324 (470)
+++|++||++||+||||+||||+|++|+++++++.||+++++|+++||++|+|++++++++++.+.. ..+++||
T Consensus 249 r~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~ 328 (453)
T PRK06943 249 RALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSY 328 (453)
T ss_pred HHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeEeeehhhccCcccceEEEEcHHHHHhhcccCccCCccCCCCC
Confidence 9999999999999999999999999999999999999999999999996699999999999988753 2488999
Q ss_pred CCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC--chhHHHHHHHH
Q 012138 325 GGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL--PVSAYDICLKM 402 (470)
Q Consensus 325 ~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~l 402 (470)
++||++|+++.++|+.++++++.+++++++++|+++|+++.. +| .+.++++.|+|+.+++..+.. ......+.+.|
T Consensus 329 ~gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~-~~-~v~~vrG~Gl~~gvel~~~~~~~~~~~~~i~~~~ 406 (453)
T PRK06943 329 TGNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPLAA-HP-QVRHLRQRGTIFAFDVALDGDAARTFSRRFFEAA 406 (453)
T ss_pred CCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc-CC-CEEeEeccccEEEEEEccCCCcchHHHHHHHHHH
Confidence 999999999999999999999999999999999999999854 65 788999999999999963221 11256788999
Q ss_pred HHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 403 KERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 403 ~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
+++||++.+.+ +.+||+||+.+|++||++++++|+++|+ ++
T Consensus 407 ~~~Gll~~~~g-~~l~~~Ppl~it~~eid~~~~~l~~al~-~~ 447 (453)
T PRK06943 407 LERELLLRPIG-TTVYLMPPYVLDDDEIAWLAERTRATLD-AT 447 (453)
T ss_pred HHCCcEEEecC-CEEEEeCCCcCCHHHHHHHHHHHHHHHH-HH
Confidence 99999998764 6899999999999999999999999998 75
No 12
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=100.00 E-value=5.2e-66 Score=476.38 Aligned_cols=392 Identities=31% Similarity=0.535 Sum_probs=339.7
Q ss_pred CCchHHHHHHHhhhccc---CCCCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCC
Q 012138 36 SSSSQQLINLEYEYSAH---NYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSR 112 (470)
Q Consensus 36 ~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~ 112 (470)
.+.+....+..++.... .+...|+++.+++|.|+||.+|++|||+.+|.+..++||+||+|++++.+|+..+.+...
T Consensus 8 ~~~~~~~~~~~~~~ls~~~~~~~~~Pl~Iv~~~~~ylyDe~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t~ 87 (442)
T KOG1404|consen 8 GPSTDQVLQKRRAFLSPGLTSYYKKPLVIVRGEGQYLYDEEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTTS 87 (442)
T ss_pred CcchhhHHHHhhhcCCcceeccccCCceEEecceEEEEcCCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEeec
Confidence 34455555555555433 344569999999999999999999999999999999999999999999999999988888
Q ss_pred CCCCCcHHHHHHHHhhhh--CCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCc
Q 012138 113 AFYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDN 190 (470)
Q Consensus 113 ~~~~~~~~~l~~~l~~~~--~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~ 190 (470)
.|.+++..++++.|.+.+ +.+.++|+|||+|||++|+++++.|+ +.-.||++..+|||.+..++++++..
T Consensus 88 ~~~~~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANelal~mar~Yt--------~~~diIa~r~~YHG~t~~t~glt~~~ 159 (442)
T KOG1404|consen 88 GYLNPPIHDLAEALVSKLPGDLKVVFFVNSGSEANELALKMARLYT--------GNLDIIARRNSYHGNTLYTLGLTGLS 159 (442)
T ss_pred cccCCcHHHHHHHHHHhCCCCceEEEEecCCchHHHHHHHHHHHhc--------CCceEEEeeccccCCchhhcccccCC
Confidence 889999999999999988 46789999999999999999999873 66799999999999999999999987
Q ss_pred ccccCCCCCC--------CCeeeecCCC----------HHHHHHHHHhc-CCCeEEEEEccccCCCccccCChhhHHHHH
Q 012138 191 EAIRGFGPLL--------PGHLKVDFGD----------ITALEKIFKES-GDQIAGFLFEPIQGEAGVIIPPDGYLKAVR 251 (470)
Q Consensus 191 ~~~~~~~~~~--------~~~~~~~~~d----------~~~Le~~l~~~-~~~~~~vi~epi~n~~G~~~~~~~~l~~l~ 251 (470)
.++.++.... |+.+..++.+ .+++++.+... +..++++|+|++++-+|.+.+++.|++++.
T Consensus 160 ~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~ 239 (442)
T KOG1404|consen 160 PWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAY 239 (442)
T ss_pred cccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHH
Confidence 7766554332 2222222222 25566666443 357999999999999999999999999999
Q ss_pred HHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcCC-ccCCCCCCHHH
Q 012138 252 DLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-HGSTFGGNPLA 330 (470)
Q Consensus 252 ~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~-~~~t~~~~~~~ 330 (470)
++|+++|.++|.||||+||||+|.+|++++.++.|||+|++|++|+|+ |+|+++.++++++.+.... +.+||++||++
T Consensus 240 ~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIvTmAKgiGnG~-Pl~AVvtt~EIa~v~~~~~~~fnTyggnP~a 318 (442)
T KOG1404|consen 240 KVVRKRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIVTMAKGIGNGF-PLGAVVTTPEIADVLNQKSSHFNTYGGNPVA 318 (442)
T ss_pred HHHHHcCCEEEehhhhhccccccccccccccCCCccHHHHHhhccCCC-cceeeecCHHHHHHHHhccccccccCCCchh
Confidence 999999999999999999999999999999999999999999999997 9999999999999997665 89999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC------chhHHHHHHHHHH
Q 012138 331 SAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL------PVSAYDICLKMKE 404 (470)
Q Consensus 331 ~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~------~~~~~~~~~~l~~ 404 (470)
|+++.++|++++++++.++..+.+.+|++.|.++..++| .+.++||.|+|+++++..+.. ......+.+.|++
T Consensus 319 ~avg~aVL~Vikee~LqE~aa~vG~yl~~~l~~l~d~h~-iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke 397 (442)
T KOG1404|consen 319 CAVGLAVLKVIKEENLQENAAEVGSYLLEKLAALKDKHP-IIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKE 397 (442)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcCC-ceeecccceeEEEEEEecccCCCCCcchHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999997 999999999999999976652 1234567889999
Q ss_pred cCceeccC--CCCEEEEecCCCCCHHHHHHHHHHH
Q 012138 405 RGILAKPT--HDTIVRLTPPLSISSNELQEGSKAL 437 (470)
Q Consensus 405 ~Gv~~~~~--~~~~iR~~~~~~~t~e~i~~~~~~l 437 (470)
.|+++..+ .++++|++||+++|+||++.+++..
T Consensus 398 ~Gvlvg~g~i~G~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 398 LGVLVGKGGIHGNVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred hCeeeecccccceEEEecCCeeccHHHHHHHHHHH
Confidence 99999655 3779999999999999997777755
No 13
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=2.5e-65 Score=515.83 Aligned_cols=402 Identities=26% Similarity=0.426 Sum_probs=344.8
Q ss_pred chHHHHHHHhhhcccCCCC-------C-ceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccc
Q 012138 38 SSQQLINLEYEYSAHNYHP-------V-PIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTL 109 (470)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~-------~-p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~ 109 (470)
.++++++.+.++.++.+.+ . |+++++++|+|+||.||++||||.+++++.++||+||+|.+++.+|++++.+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~ 98 (472)
T PRK08742 19 TAEHWRQRDLAVLWHPCTQMREHPHTLPLVPIARGEGAWLVGHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQ 98 (472)
T ss_pred cHHHHHHhhhcccccCCcccccccccCCCeeEEecccCEEEeCCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCC
Confidence 4567777776766543322 2 4679999999999999999999999999999999999999999999998765
Q ss_pred cCC-CCCCCcHHHHHHHHhhhhC-------CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCcccccc
Q 012138 110 SSR-AFYNDKFPVFAERLTSMFG-------YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTL 181 (470)
Q Consensus 110 ~~~-~~~~~~~~~l~~~l~~~~~-------~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~ 181 (470)
... .+.++...+++++|.+..+ .++++|++||+||++.|+|+++.|+.. +| .+++.+||++.++|||++.
T Consensus 99 ~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~-~g-~~~r~~ii~~~~syHG~t~ 176 (472)
T PRK08742 99 VMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHN-RG-EHRRTRFIALENGYHGETI 176 (472)
T ss_pred ccccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHh-cC-CCCCcEEEEECCCcCCCch
Confidence 543 4567788999999998764 469999999999999999999986432 12 1356799999999999999
Q ss_pred chhcccCCcccccCCCCCCCCeeeecCCC-----------------HHHHHHHHHhcCCCeEEEEEcc-ccCCCccccCC
Q 012138 182 AAISMSCDNEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKESGDQIAGFLFEP-IQGEAGVIIPP 243 (470)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----------------~~~Le~~l~~~~~~~~~vi~ep-i~n~~G~~~~~ 243 (470)
+++++++.+.++..|.|..+++..+|+++ ++.+++++.++++++++||+|| +++.+|.+.|+
T Consensus 177 gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p 256 (472)
T PRK08742 177 GALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHH 256 (472)
T ss_pred hhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCC
Confidence 99999987777778888777766666543 4677888876557899999999 69999999999
Q ss_pred hhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCc------
Q 012138 244 DGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP------ 317 (470)
Q Consensus 244 ~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~------ 317 (470)
++|+++|+++|++||++||+||||+||||+|++|+++++++.||+++++|+++||++|+|++++++++++.+..
T Consensus 257 ~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv~~gKgl~gG~~Plaav~~~~ei~~~~~~~~~~~~ 336 (472)
T PRK08742 257 PAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLCLSKGLTGGFLPLSAVLATQQLYDAFLDDSRERA 336 (472)
T ss_pred HHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCCCEEEEcccccCCCCCcceeeccHHHHHHhhccCccCc
Confidence 99999999999999999999999999999999999999999999999999999996699999999999987742
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC---c--
Q 012138 318 GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL---P-- 392 (470)
Q Consensus 318 ~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~---~-- 392 (470)
..+++||++||++|+++.++|++++++++.+++++++++|++.++.+ .++| .+.++++.|+++++++..+.. .
T Consensus 337 ~~h~~T~~gnpl~~Aaa~a~L~~i~~~~l~~~~~~~g~~l~~~~~~~-~~~~-~i~dvRG~Gl~~giel~~~~~~~~~~~ 414 (472)
T PRK08742 337 FLHSHSYTGNPLACAAALATLDIFADDDVIARNQPTAARMTQLAAQI-GEHP-HVADVRQAGMVVAFELTRGGNKRTPFP 414 (472)
T ss_pred cCcCCCCCccHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH-hcCC-CeeeEeccceEEEEEeccCccccccCC
Confidence 25789999999999999999999999999999999999999877776 4465 789999999999999964321 0
Q ss_pred ---hhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 393 ---VSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 393 ---~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
.....+.+.|+++||++.+. +++|||.||+++|++||++++++|+++|+ ++
T Consensus 415 ~~~~~~~~~~~~~~~~Gll~~~~-g~vi~~~PpL~it~~ei~~~~~~l~~~l~-~~ 468 (472)
T PRK08742 415 PAARVGLHAYRAALARGVVLRPL-GDVLYWMPPYCVDEAQLALLADTTRHAID-EA 468 (472)
T ss_pred chhHHHHHHHHHHHHCCeEEEec-CCEEEEECCCCCCHHHHHHHHHHHHHHHH-HH
Confidence 01356788999999999876 47999999999999999999999999998 64
No 14
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=4.8e-65 Score=513.99 Aligned_cols=401 Identities=30% Similarity=0.493 Sum_probs=342.7
Q ss_pred CCCCCCchHHHHHHHhhh--cccCC-CCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHc-
Q 012138 32 TSPSSSSSQQLINLEYEY--SAHNY-HPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKL- 107 (470)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~--~~~~~-~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~- 107 (470)
+-|+ .+.+++++...+| ....+ .+.|+++++++|+|+||.||++||||.+++++.++||+||+|.+++.+|+++.
T Consensus 18 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~ 96 (464)
T PRK06938 18 TLYE-FSNSPLLERQSRRESNARSYPRRIPLALKRARGIYVEDVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADEL 96 (464)
T ss_pred CCcc-ccHHHHHHHHHhhhhhccccccCCCceEEeccccEEEeCCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhh
Confidence 4444 3455777776655 34444 35789999999999999999999999999999999999999999999999753
Q ss_pred cccCCCCCCCcHHHHHHHHhhhhCC-----CeEEec-CChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCcccccc
Q 012138 108 TLSSRAFYNDKFPVFAERLTSMFGY-----DMVLPM-NTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTL 181 (470)
Q Consensus 108 ~~~~~~~~~~~~~~l~~~l~~~~~~-----~~v~~~-~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~ 181 (470)
.+....+.++...+++++|.+..+. ++++|+ |||+||++.|+|+++.+ +|+..||.+.++|||++.
T Consensus 97 ~~~~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~--------tgr~~ii~~~~~yHG~t~ 168 (464)
T PRK06938 97 PLHTLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTA--------TGRSTVLSFQGGYHGMSQ 168 (464)
T ss_pred cccccccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHh--------hCCCeEEEECCccCCccH
Confidence 2333345678889999999987642 367665 89999999999999986 367799999999999999
Q ss_pred chhcccCCcccccCCCCCCCCeeeecCC-----------------CHHHHHHHHHhcC---CCeEEEEEccccCCCcccc
Q 012138 182 AAISMSCDNEAIRGFGPLLPGHLKVDFG-----------------DITALEKIFKESG---DQIAGFLFEPIQGEAGVII 241 (470)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------d~~~Le~~l~~~~---~~~~~vi~epi~n~~G~~~ 241 (470)
+++++++...++..|.+..+++..+|++ +++.+++++.+.. +++++||+||+++.+|.+.
T Consensus 169 ~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~ 248 (464)
T PRK06938 169 GALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIP 248 (464)
T ss_pred HHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcC
Confidence 9999988766667777776665555543 2567888887532 3799999999999999999
Q ss_pred CChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcCCcc
Q 012138 242 PPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHG 321 (470)
Q Consensus 242 ~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~ 321 (470)
|+++|+++|+++|++||++||+||||+||||+|++|+++++++.||+++++|+++||+ |+|++++++++ +.+.+..++
T Consensus 249 p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~gKglggG~-PlsAv~~~~~~-~~~~~~~~~ 326 (464)
T PRK06938 249 APIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVVLSKAIGGSL-PLAVVVYREWL-DTWQPGAHA 326 (464)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEEEeeccccCCC-ceEEEeehhHh-hccCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999997 99999999885 777667789
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC----------
Q 012138 322 STFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL---------- 391 (470)
Q Consensus 322 ~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~---------- 391 (470)
+||++||++|+++.++|+.++++++.+++++++++|++.|+++..++| .+.++++.|+|+++++..+..
T Consensus 327 ~T~~gnpla~Aaa~a~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~-~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~ 405 (464)
T PRK06938 327 GTFRGNQMAMAAGSATLRYIKEHRLAEHAAAMGERLREHLRQLQRDYP-QLGDVRGRGLMLGVEIVDPQGEPDALGHPPA 405 (464)
T ss_pred CCCCcCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCC-CeeeeeccceEEEEEeccCcccccccccCCc
Confidence 999999999999999999999999999999999999999999988886 899999999999999964310
Q ss_pred -chhHHHHHHHHHHcCceeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 392 -PVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 392 -~~~~~~~~~~l~~~Gv~~~~~~--~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
......+++.|+++||++.+.+ .+++||.||+++|++|+++++++|++++. ++
T Consensus 406 ~~~~~~~~~~~~~~~Gll~~~~g~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~-~~ 461 (464)
T PRK06938 406 NGELASLIQRECLRRGLILELGGRHGSVVRFLPPLIITAEQIDEVAEIFAEAVA-AA 461 (464)
T ss_pred cHHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCccCHHHHHHHHHHHHHHHH-HH
Confidence 0124568889999999997653 58999999999999999999999999998 63
No 15
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=9.4e-65 Score=512.10 Aligned_cols=400 Identities=28% Similarity=0.456 Sum_probs=344.0
Q ss_pred HHHHHHHhhhcccCCC------CC-ceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCC
Q 012138 40 QQLINLEYEYSAHNYH------PV-PIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSR 112 (470)
Q Consensus 40 ~~~~~~~~~~~~~~~~------~~-p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~ 112 (470)
+++++.++++.++.+. +. |+++++++|+++||.||++||||.+++++.++||+||+|.+++.+|++++.+...
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~ 84 (466)
T PRK07030 5 DQWMQRDLKVLWHPCTQMKDHEQLPLIPIRRGEGVWLEDFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVIL 84 (466)
T ss_pred HHHHhhhhcccccccccccccccCCCceEEeeeccEEEECCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCccc
Confidence 3455555555443322 23 3689999999999999999999999999999999999999999999998766543
Q ss_pred -CCCCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCC
Q 012138 113 -AFYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD 189 (470)
Q Consensus 113 -~~~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~ 189 (470)
.+.++...+++++|++..+ .++++|++||+||++.|+|+++.|+.. ++. +++.+||++.++|||++.+++++++.
T Consensus 85 ~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlKlAr~~~~~-~g~-t~r~~ii~~~~~yHG~t~ga~s~~~~ 162 (466)
T PRK07030 85 AGFSHEPVIELSERLVKITPPGLSRCFYADNGSSAIEVALKMSFHYWRN-RGK-PRKKRFVTLTNSYHGETLAAMSVGDV 162 (466)
T ss_pred cccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHH-hCC-CCCcEEEEECCCcCcccHHHHhccCC
Confidence 4677888999999999873 679999999999999999999986321 111 35678999999999999999999887
Q ss_pred cccccCCCCCCCCeeeecCCC-----------------HHHHHHHHHhcCCCeEEEEEcc-ccCCCccccCChhhHHHHH
Q 012138 190 NEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKESGDQIAGFLFEP-IQGEAGVIIPPDGYLKAVR 251 (470)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d-----------------~~~Le~~l~~~~~~~~~vi~ep-i~n~~G~~~~~~~~l~~l~ 251 (470)
+.++..|.|..+++..+|+++ ++++++++.++++++++||+|| +++.+|.+.|+++|+++|+
T Consensus 163 ~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr 242 (466)
T PRK07030 163 ALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLR 242 (466)
T ss_pred ccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHH
Confidence 777777777776666665433 5678888876667899999999 7999999999999999999
Q ss_pred HHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCc-------CCccCCC
Q 012138 252 DLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP-------GEHGSTF 324 (470)
Q Consensus 252 ~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~-------~~~~~t~ 324 (470)
++|++||++||+||||+||||+|++|+++++++.||+++++|+++||++|+|++++++++++.+.. ..+++||
T Consensus 243 ~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~ 322 (466)
T PRK07030 243 EACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFLCLSKALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSY 322 (466)
T ss_pred HHHHHcCCEEEEeehhhCcCccccchHHHhcCCCCCEEeeehhccCCcccceEEEecHHHHHHHhcccccccccccCCCC
Confidence 999999999999999999999999999999999999999999999996699999999999987742 3588999
Q ss_pred CCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC---c-----hhHH
Q 012138 325 GGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL---P-----VSAY 396 (470)
Q Consensus 325 ~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~---~-----~~~~ 396 (470)
++||++|+++.++|+.++++++.++++++++++++.|+++. ++| .+.++++.|+++++++..+.. + ....
T Consensus 323 ~gnpla~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~-~~~-~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~ 400 (466)
T PRK07030 323 TGNPLACAAALATLDIFEQDNVIENNRALARRMAEATAHLA-DHP-HVAEVRQTGMILAIEMVQDKASKTPYPWQERRGL 400 (466)
T ss_pred CCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh-cCC-CEEEeEeceeEEEEEeccCccccccCcchhHHHH
Confidence 99999999999999999999999999999999999999985 565 789999999999999964321 0 1135
Q ss_pred HHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 397 DICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 397 ~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
.+.+.|+++||++.+. ++.+||.||+++|++||++++++|+++++ ++
T Consensus 401 ~i~~~~~~~Gvl~~~~-g~~i~~~Ppl~it~~eid~~~~~l~~al~-~~ 447 (466)
T PRK07030 401 KVYQHALERGALLRPL-GSVVYFLPPYVITPEQIDFLAEVASEGID-IA 447 (466)
T ss_pred HHHHHHHHCCeEEEec-CCEEEEECCccCCHHHHHHHHHHHHHHHH-HH
Confidence 7888999999999876 47999999999999999999999999999 87
No 16
>PRK06062 hypothetical protein; Provisional
Probab=100.00 E-value=1e-64 Score=510.94 Aligned_cols=397 Identities=31% Similarity=0.525 Sum_probs=340.9
Q ss_pred hHHHHHHHhhhcccCCCC----CceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCC
Q 012138 39 SQQLINLEYEYSAHNYHP----VPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAF 114 (470)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~----~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~ 114 (470)
+++.++...++.++.|.+ .|+++++++|+|+||.||++||||.+++++.++||+||+|.+++.+|++++.+....+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~ 92 (451)
T PRK06062 13 GARAYALDRAHVFHSWSAQGKINPMVIAGAEGSYVWDYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAPAH 92 (451)
T ss_pred hHHHHHhhhhhccccccccccCCCceEEeceeeEEEECCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCCcc
Confidence 455666666666665543 5899999999999999999999999999999999999999999999999987765556
Q ss_pred CCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCccc
Q 012138 115 YNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEA 192 (470)
Q Consensus 115 ~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~ 192 (470)
.++...+++++|+++.+ .++|+|++||+||++.|+|+++.+ +++..||.+.++|||++.+++++++.+..
T Consensus 93 ~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~--------tgr~~ii~~~~~yHG~t~~als~~~~~~~ 164 (451)
T PRK06062 93 ANDARSEAARLIAERAPGDLSKVFFTNGGADANEHAVRMARLH--------TGRPKVLSAYRSYHGGTGSAINLTGDPRR 164 (451)
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHHHHHHHHHHh--------hCCceEEEEeCCCCCCCHHHHhhcCCccc
Confidence 78889999999999874 679999999999999999999986 36678999999999999999998875533
Q ss_pred ccCCCCCCCCeeee--------cC---CC-------HHHHHHHHHhc-CCCeEEEEEccccCCCccccCChhhHHHHHHH
Q 012138 193 IRGFGPLLPGHLKV--------DF---GD-------ITALEKIFKES-GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDL 253 (470)
Q Consensus 193 ~~~~~~~~~~~~~~--------~~---~d-------~~~Le~~l~~~-~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l 253 (470)
+ ...+..+++..+ ++ +| +++|+++++.. ++++++||+||+++.+|.+.|+++|+++|+++
T Consensus 165 ~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~l 243 (451)
T PRK06062 165 W-PNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVREL 243 (451)
T ss_pred c-cCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHH
Confidence 2 223333333322 12 23 67888888654 25799999999999999999999999999999
Q ss_pred HHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcC--CccCCCCCCHHHH
Q 012138 254 CSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG--EHGSTFGGNPLAS 331 (470)
Q Consensus 254 ~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~--~~~~t~~~~~~~~ 331 (470)
|++||++||+||||+||||+|.+|+++++++.||+++|+|+++||++|+|++++++++++.+... .+++||++||++|
T Consensus 244 c~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~ 323 (451)
T PRK06062 244 CDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPDLITFAKGVNSGYVPLGGVAISEAIAATFADRPYPGGLTYSGHPLAC 323 (451)
T ss_pred HHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCCeeeechhhhcCCcCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999977999999999999988643 5788999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHH-HHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC------c-----hhHHHHH
Q 012138 332 AVAIASLDVIRDEKLAERSAHLG-EELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL------P-----VSAYDIC 399 (470)
Q Consensus 332 aaa~a~l~~~~~~~~~~~~~~~~-~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~------~-----~~~~~~~ 399 (470)
+++.++|+.++++++.+++++++ .++++.|+++..++| .+..+++.|+|+.+++..+.. . .....+.
T Consensus 324 Aaa~a~L~~l~~~~l~~~~~~~G~~~l~~~L~~l~~~~~-~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (451)
T PRK06062 324 AAAVATINAMEEEGIVENAARIGAEVLGPGLRELAERHP-SVGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVK 402 (451)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCC-cEEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHH
Confidence 99999999999988999999999 699999999988886 788999999999999864210 0 1245788
Q ss_pred HHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccCC
Q 012138 400 LKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 447 (470)
Q Consensus 400 ~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~ 447 (470)
+.|+++||++.+. .+.+||+||+.+|++||++++++|+++++ +++.
T Consensus 403 ~~l~~~Gvl~~~~-~~~lrl~ppl~~t~~eid~~~~~l~~~l~-~~~~ 448 (451)
T PRK06062 403 AACKERGLLPFVN-GNRIHVVPPCTVTEDEVREGLAILDAALA-VADA 448 (451)
T ss_pred HHHHHCCcEEeec-CCEEEEECCccCCHHHHHHHHHHHHHHHH-Hhhh
Confidence 9999999998764 57899999999999999999999999998 7654
No 17
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.3e-64 Score=511.36 Aligned_cols=409 Identities=30% Similarity=0.515 Sum_probs=351.4
Q ss_pred CCCCCCchHHHHHHHhhhcccCCC-------CCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHH
Q 012138 32 TSPSSSSSQQLINLEYEYSAHNYH-------PVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQA 104 (470)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~ 104 (470)
++.++-+++++.++++++.++.+. +.|+++++++|+|+||.||++||||.+++++.++||+||+|.+++.+|+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql 85 (460)
T PRK06916 6 TDKPSYTYEELSEKNKAYVWHPFTQMKDYLEEDPLIIERGEGRKLYDVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQL 85 (460)
T ss_pred CCCCCCChHHHHHHHhhccccccccccccccCCCeeEEeccccEEEeCCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHH
Confidence 344445678888888777654322 3589999999999999999999999999999999999999999999999
Q ss_pred HHccccCC-CCCCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCcccccc
Q 012138 105 EKLTLSSR-AFYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTL 181 (470)
Q Consensus 105 ~~~~~~~~-~~~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~ 181 (470)
+++.+... .+.++...+++++|+++.+ .++++|+|||+||++.|+|+++.++.. +|. +++..||.+.++|||++.
T Consensus 86 ~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~~~~-~g~-tgr~~ii~~~~~YHG~t~ 163 (460)
T PRK06916 86 NKIAHSTLLGLANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQN-KGK-PKKQRFVTLKNAYHGDTI 163 (460)
T ss_pred HhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHh-cCC-CCCcEEEEECCcCCcccH
Confidence 98765543 3567888999999999874 479999999999999999999986422 121 456799999999999999
Q ss_pred chhcccCCcccccCCCCCCCCeeeecCC-----------------CHHHHHHHHHhcCCCeEEEEEcc-ccCCCccccCC
Q 012138 182 AAISMSCDNEAIRGFGPLLPGHLKVDFG-----------------DITALEKIFKESGDQIAGFLFEP-IQGEAGVIIPP 243 (470)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------d~~~Le~~l~~~~~~~~~vi~ep-i~n~~G~~~~~ 243 (470)
+++++++.+.++..|.+..+++..+|++ ++++++++++++++++++||+|| +++.+|.+.|+
T Consensus 164 ~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~ 243 (460)
T PRK06916 164 GAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMP 243 (460)
T ss_pred HhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCC
Confidence 9999998877777788776666555442 25677888876667899999999 69999999999
Q ss_pred hhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCc------
Q 012138 244 DGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP------ 317 (470)
Q Consensus 244 ~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~------ 317 (470)
++|+++|+++|++||++||+|||++||||+|++|+++++++.||+++++|+++||++|+|++++++++++.+..
T Consensus 244 ~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~ei~~~~~~~~~~~~ 323 (460)
T PRK06916 244 KGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTPDIMTAGKGLTGGYLPIAITVTTDEIYNAFYGDYEEQK 323 (460)
T ss_pred HHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCCCCeeeeehhhhcCccccceeeecHHHHHHhhccccccC
Confidence 99999999999999999999999999999999999999999999999999999996699999999999987642
Q ss_pred -CCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC---c-
Q 012138 318 -GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL---P- 392 (470)
Q Consensus 318 -~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~---~- 392 (470)
..+++||++||++|+++.++|+.++++++.++++++++++++.|+++.. +| .+.++++.|+|+.+++..+.. .
T Consensus 324 ~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l~~-~~-~v~~vrG~Glm~giel~~~~~~~~~~ 401 (460)
T PRK06916 324 TFFHGHSYTGNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDLFA-LK-HVGDIRQLGLMVGIELVKNKETKEPF 401 (460)
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhc-CC-CeEEeecCCceeeEEeecccccccCC
Confidence 3478899999999999999999999989999999999999999999865 65 788999999999999864321 0
Q ss_pred ----hhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccC
Q 012138 393 ----VSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 393 ----~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
.....++..|+++||++.+. ++.+||.||+++|++||++++++|+++++ ++.
T Consensus 402 ~~~~~~~~~i~~~~~~~Gvl~~~~-g~~l~~~Ppl~it~~~id~~~~~l~~~l~-~~~ 457 (460)
T PRK06916 402 EWTERVGVQVCKRSRELGMLTRPL-GNTIVFMPPLASTIDELDEMLRILYKAIS-DVT 457 (460)
T ss_pred CchhhHHHHHHHHHHHCCeEEEec-CCEEEEeCCcccCHHHHHHHHHHHHHHHH-hhc
Confidence 01357889999999999876 47999999999999999999999999998 653
No 18
>PRK07483 hypothetical protein; Provisional
Probab=100.00 E-value=8.8e-65 Score=510.29 Aligned_cols=391 Identities=30% Similarity=0.488 Sum_probs=337.6
Q ss_pred cCCCCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCC-CCCCCcHHHHHHHHhhhh
Q 012138 52 HNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMF 130 (470)
Q Consensus 52 ~~~~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~ 130 (470)
..+.+.|+++++++|+|+||.||++||||.+++++.++||+||+|.+++.++++++.+... .+.++...+++++|++..
T Consensus 7 ~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~ 86 (443)
T PRK07483 7 RSPRATLPVAVAGEGIYLIDATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTSFFTTEPAEALADRLVAAA 86 (443)
T ss_pred ccccCCCceEEeceEEEEEeCCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhC
Confidence 3445579999999999999999999999999999999999999999999999998764333 356788899999999987
Q ss_pred C--CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeec-
Q 012138 131 G--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVD- 207 (470)
Q Consensus 131 ~--~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 207 (470)
+ .++++|++||+||++.|+|+++.|+.. ++ .+++.+||.+.++|||++.+++++++.+.++..|.+..+++..++
T Consensus 87 p~~~~~v~f~~sGsEAve~AlklAr~~~~~-~g-~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~ 164 (443)
T PRK07483 87 PAGLEHVYFVSGGSEAVEAALKLARQYFVE-IG-QPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSP 164 (443)
T ss_pred CCCCCEEEEcCCcHHHHHHHHHHHHHHHHh-cC-CCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCC
Confidence 3 689999999999999999999986422 22 135678999999999999999999987777777777776655554
Q ss_pred ---CCC--------------HHHHHHHHHh-cCCCeEEEEEccccC-CCccccCChhhHHHHHHHHHhcCcEEEEecccc
Q 012138 208 ---FGD--------------ITALEKIFKE-SGDQIAGFLFEPIQG-EAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 268 (470)
Q Consensus 208 ---~~d--------------~~~Le~~l~~-~~~~~~~vi~epi~n-~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~ 268 (470)
|++ ++++++++.. .++++++||+||+++ .+|.+.|+++|+++|+++|++||++||+||||+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t 244 (443)
T PRK07483 165 CYAYREQRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMC 244 (443)
T ss_pred CccccccccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEeccee
Confidence 333 2577776653 335899999999998 579999999999999999999999999999999
Q ss_pred CCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcC----CccCCCCCCHHHHHHHHHHHHHHhhh
Q 012138 269 GLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG----EHGSTFGGNPLASAVAIASLDVIRDE 344 (470)
Q Consensus 269 g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~----~~~~t~~~~~~~~aaa~a~l~~~~~~ 344 (470)
||||+|++|+++++++.||+++++|+++||++|+|++++++++++.+... .|++||++||++|+++.++|+.++++
T Consensus 245 GfGRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~ 324 (443)
T PRK07483 245 GMGRTGTLFACEEDGVAPDLVTIAKGLGAGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAED 324 (443)
T ss_pred CcccCcHHHHHhhcCCCCCeeeehhhhccCccccEEEEEcHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999966999999999999888543 48899999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC--------chhHHHHHHHHHHcCceeccCC---
Q 012138 345 KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL--------PVSAYDICLKMKERGILAKPTH--- 413 (470)
Q Consensus 345 ~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~--------~~~~~~~~~~l~~~Gv~~~~~~--- 413 (470)
++.+++++++++|++.|+++..++| .+.++++.|+|+++++..+.. ......+++.|+++||++.+.+
T Consensus 325 ~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~ 403 (443)
T PRK07483 325 GLLANVRARGEQLRARLRERLGQHP-HVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTI 403 (443)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCC-CeeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccc
Confidence 9999999999999999999887786 789999999999999854310 0124578899999999997642
Q ss_pred ----CCEEEEecCCCCCHHHHHHHHHHHHHHHhcccC
Q 012138 414 ----DTIVRLTPPLSISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 414 ----~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
++.+||.||+++|++||++++++|+++|. ++.
T Consensus 404 ~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~-~~~ 439 (443)
T PRK07483 404 DGVRGDHVLLAPPFIITAAQIDEIVERLGDAID-AAL 439 (443)
T ss_pred cCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-HHH
Confidence 47999999999999999999999999998 653
No 19
>PRK07481 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-64 Score=511.08 Aligned_cols=398 Identities=31% Similarity=0.511 Sum_probs=339.9
Q ss_pred HHHhhhcccCCC-------CCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCC--CC
Q 012138 44 NLEYEYSAHNYH-------PVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSR--AF 114 (470)
Q Consensus 44 ~~~~~~~~~~~~-------~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~--~~ 114 (470)
+..+++.|+.+. +.|+++++++|+|+||.||++||||.+++++.++||+||+|.+++.+|++++.+... .+
T Consensus 4 ~~~~~~~w~p~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~ 83 (449)
T PRK07481 4 SNNARRFWHPMAHPAEMKARPPIIIVRGDGVYVYDIDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGT 83 (449)
T ss_pred ccccccccCCcccccccccCCCceEEeccccEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceeccccc
Confidence 344566666542 258999999999999999999999999999999999999999999999998776532 35
Q ss_pred CCCcHHHHHHHHhhhh---CCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcc
Q 012138 115 YNDKFPVFAERLTSMF---GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 191 (470)
Q Consensus 115 ~~~~~~~l~~~l~~~~---~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~ 191 (470)
.++...+++++|++.. +.++++|++||+||++.|+|+++.|+.. +| .+++.+||.+.++|||++.+++++++.+.
T Consensus 84 ~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~~~~-~g-~~~r~~ii~~~~~yHG~t~ga~s~~~~~~ 161 (449)
T PRK07481 84 THPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWKV-RG-QPERTKFISLKQGYHGTHFGGASVNGNTV 161 (449)
T ss_pred CCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHHh-cC-CCCCcEEEEECCCcCCcchhhhccCCCcc
Confidence 6788899999999987 3578999999999999999999986422 12 13567899999999999999999988776
Q ss_pred cccCCCCCCCCeeeec--------CC--CHHHH--------HHHHH-hcCCCeEEEEEccccCCCccccCChhhHHHHHH
Q 012138 192 AIRGFGPLLPGHLKVD--------FG--DITAL--------EKIFK-ESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRD 252 (470)
Q Consensus 192 ~~~~~~~~~~~~~~~~--------~~--d~~~L--------e~~l~-~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~ 252 (470)
++..|.+..+++..++ ++ |++++ |+++. .+++++++||+||+++.+|.+.|+++|+++|++
T Consensus 162 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~ 241 (449)
T PRK07481 162 FRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVRE 241 (449)
T ss_pred cccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHH
Confidence 7767777766655443 44 54443 44444 234689999999999999999999999999999
Q ss_pred HHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCc-------CCccCCCC
Q 012138 253 LCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP-------GEHGSTFG 325 (470)
Q Consensus 253 l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~-------~~~~~t~~ 325 (470)
+|++||++||+|||++||||+|++|+++++++.||++++||+++||++|+|++++++++++.+.. ..+++||+
T Consensus 242 lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~ 321 (449)
T PRK07481 242 VCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCLAKGITSGYVPLGATMVNARIADAFEANADFGGAIMHGYTYS 321 (449)
T ss_pred HHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEEEeecccCCCcCceEEEEcHHHHHHHhccCccccccccCCCCC
Confidence 99999999999999999999999999999999999999999999996699999999999998853 25889999
Q ss_pred CCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC--------chhHHH
Q 012138 326 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL--------PVSAYD 397 (470)
Q Consensus 326 ~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~--------~~~~~~ 397 (470)
+||++|+++.++|+.++++++.+++++++++|++.|+++..++| .+..+++.|+|+++++..+.. ......
T Consensus 322 gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~ 400 (449)
T PRK07481 322 GHPVACAAALATLDIVVREDLPANAAKRGAYLLEGLQPLKERFE-LVGDVRGKGLMLALDLVADKATREPIDPSKGYANA 400 (449)
T ss_pred CCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCC-CeEEEeecceEEEEEecccccccCCCCchhHHHHH
Confidence 99999999999999999999999999999999999999988775 889999999999999854210 013467
Q ss_pred HHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccC
Q 012138 398 ICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 398 ~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
+.+.|+++||++.+.+ +.+||+||+++|++||++++++|+++++ ++.
T Consensus 401 ~~~~~~~~Gvl~~~~g-~~i~l~Ppl~it~~eid~~~~~l~~~l~-~~~ 447 (449)
T PRK07481 401 VADVARENGVLVRPSG-TKIILSPPLVIQREDVDRIVDALDAGLS-AVP 447 (449)
T ss_pred HHHHHHhCCeEEEecC-CEEEEECCCCCCHHHHHHHHHHHHHHHH-hcc
Confidence 8889999999998764 5699999999999999999999999998 653
No 20
>PRK06105 aminotransferase; Provisional
Probab=100.00 E-value=2.9e-64 Score=508.93 Aligned_cols=402 Identities=28% Similarity=0.447 Sum_probs=344.8
Q ss_pred hHHHHHHHhhhcccCCC-------CCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccC
Q 012138 39 SQQLINLEYEYSAHNYH-------PVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSS 111 (470)
Q Consensus 39 ~~~~~~~~~~~~~~~~~-------~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~ 111 (470)
.+++++.+.++.++.+. ..|+++++++|+++||.|||+||||.+++++.++||+||+|.+++.+|++++.+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~ 84 (460)
T PRK06105 5 PNSLEARDIAYHLHPYTNARRHEEEGPLVIERGEGIYVYDDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYH 84 (460)
T ss_pred hHHHHHhhhhhcccCCcccccccccCCceEEeeeEEEEEECCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCee
Confidence 34567777777665543 24899999999999999999999999999999999999999999999999876532
Q ss_pred C--CCCCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhccc
Q 012138 112 R--AFYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMS 187 (470)
Q Consensus 112 ~--~~~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~ 187 (470)
. .+.++...+++++|++..+ .++++|++||+||+++|+|+++.++. .++. +++.+||.+.++|||++.++++++
T Consensus 85 ~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlKlar~~~~-~~g~-t~r~~il~~~~~yHG~t~~a~s~t 162 (460)
T PRK06105 85 TFSHKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLVWYYNN-ALGR-PEKKKIISRQRGYHGVTIASASLT 162 (460)
T ss_pred cccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHH-hcCC-CCCcEEEEecCccCCcchhheecc
Confidence 2 3567788999999999874 57999999999999999999987532 1221 356799999999999999999998
Q ss_pred CCcccccCCCCCCCCeeeecCCC------------------HHHHHHHHHhc-CCCeEEEEEccccCCCccccCChhhHH
Q 012138 188 CDNEAIRGFGPLLPGHLKVDFGD------------------ITALEKIFKES-GDQIAGFLFEPIQGEAGVIIPPDGYLK 248 (470)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d------------------~~~Le~~l~~~-~~~~~~vi~epi~n~~G~~~~~~~~l~ 248 (470)
+.+..+..|.+..+++..+++++ .+++|+++... ++++++||+||+++.+|.+.|+++|++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~ 242 (460)
T PRK06105 163 GLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWE 242 (460)
T ss_pred CCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHH
Confidence 87666777777766666665542 36788888543 358999999999999999999999999
Q ss_pred HHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCc-------CCcc
Q 012138 249 AVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP-------GEHG 321 (470)
Q Consensus 249 ~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~-------~~~~ 321 (470)
+|+++|++||+++|+||||+||||+|++|+++++++.||++++||+++||++|+|++++++++++.+.. ..|+
T Consensus 243 ~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~~gK~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~ 322 (460)
T PRK06105 243 KIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDILVMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFGHG 322 (460)
T ss_pred HHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCeeeeecccccCcccceEEEEcHHHHHHHhcccccCcccccC
Confidence 999999999999999999999999999999999999999999999999996699999999999988753 1378
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC--------ch
Q 012138 322 STFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL--------PV 393 (470)
Q Consensus 322 ~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~--------~~ 393 (470)
+||++||++|+++.++|+.++++++.+++++++++|++.|+++ .++| .+.++++.|+++++++..+.. ..
T Consensus 323 ~T~~gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~~l~~~L~~l-~~~~-~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~ 400 (460)
T PRK06105 323 FTASGHPVAAAVALENLAIIEERDLVGNAAERGARLQARLRAL-ADHP-LVGEVRGVGLIAAVELVADKATKTPFEPPGK 400 (460)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHh-hcCC-CeEEEEecceEEEEEEecCcccCCCCCchhH
Confidence 8999999999999999999999999999999999999999999 6775 889999999999999864321 01
Q ss_pred hHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccC
Q 012138 394 SAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 394 ~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
.+..+...|+++||++.+. .+.+||+||+++|++||++++++|.++++ ++.
T Consensus 401 ~a~~i~~~~~~~Gvl~~~~-g~~i~l~Ppl~it~~eid~~~~~l~~~l~-~~~ 451 (460)
T PRK06105 401 VGARANAAAHEHGVISRAM-GDTLAFCPPLIITAAQVDEMVDRFGRALD-DVA 451 (460)
T ss_pred HHHHHHHHHHHCCeEEEec-CCEEEEECCCccCHHHHHHHHHHHHHHHH-HHH
Confidence 2457888999999999876 47999999999999999999999999998 764
No 21
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=100.00 E-value=4.2e-64 Score=502.34 Aligned_cols=387 Identities=34% Similarity=0.577 Sum_probs=345.8
Q ss_pred cccCCCCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhh
Q 012138 50 SAHNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSM 129 (470)
Q Consensus 50 ~~~~~~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 129 (470)
..+.+.+.|+++++++|+++||.||++||||.+++++.++||+||+|.+++.++++++.+....+.++...+++++|+++
T Consensus 10 ~~~~~~~~~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~L~~~ 89 (397)
T TIGR03246 10 MVPNYAPAPFIPVRGEGSRVWDQQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGNGYTNEPVLRLAKKLVDA 89 (397)
T ss_pred hhcccCCCCceEEEeecCEEEeCCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhh
Confidence 33445678999999999999999999999999999999999999999999999999865444445677889999999999
Q ss_pred hCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCC
Q 012138 130 FGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG 209 (470)
Q Consensus 130 ~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (470)
.+.++++|++||++|++.|+++++.|+..+.+ +++..||+++.+|||++..++++++.+.++..|.+..+++..++||
T Consensus 90 ~~~~~~~f~~SGseA~e~Alk~ar~~~~~~~~--~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (397)
T TIGR03246 90 TFADKVFFCNSGAEANEAALKLARRYALDKHG--ADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYN 167 (397)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCC--CCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCC
Confidence 88889999999999999999999986432211 3567899999999999999999888777777788887888899999
Q ss_pred CHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCccee
Q 012138 210 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 289 (470)
Q Consensus 210 d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~ 289 (470)
|++++++++.+ ++++|++||+++++|.+.|+++|+++|+++|++||+++|+||+|+||||+|.+++++++++.||++
T Consensus 168 d~~~l~~~l~~---~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pDi~ 244 (397)
T TIGR03246 168 DLAAAKALISD---KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDIL 244 (397)
T ss_pred CHHHHHHHhcc---CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCCEE
Confidence 99999999975 799999999999999998899999999999999999999999999999999998888999999999
Q ss_pred eccccccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCC
Q 012138 290 ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFP 369 (470)
Q Consensus 290 s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p 369 (470)
++||+++||+ |+|++++++++++.+....+++||+++|++++++.++|+.++++++.++++++++++++.|+++..+++
T Consensus 245 t~~K~lggG~-pigav~~~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~~~~l~~~L~~l~~~~~ 323 (397)
T TIGR03246 245 TSAKALGGGF-PIGAMLTTTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQRHDLFVDGLEKINARYN 323 (397)
T ss_pred EeehhhhCCc-ceeEEEEcHHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999997 999999999999999877788899999999999999999988888999999999999999999887665
Q ss_pred CceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 370 NYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 370 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
.+..+++.|.++.+++.... ......+++.|+++|+++.+.+.+++||+||+.+|+++|++++++|.+++. ++
T Consensus 324 -~~~~vrg~G~~~~i~~~~~~-~~~~~~~~~~l~~~Gv~~~~~g~~~lR~~p~~~~t~~~i~~~~~~l~~~l~-~~ 396 (397)
T TIGR03246 324 -VFSEIRGKGLLIGAVLTEAY-QGKAKQFVNAAAEEGVIALIAGPNVVRFAPSLVISDDDIDEGLARFERAIE-QV 396 (397)
T ss_pred -CeEeeecCceEEEEEEcCch-hhHHHHHHHHHHHCCeEEeecCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH-Hh
Confidence 67889999999999885421 125678999999999999877678999999999999999999999999987 53
No 22
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=6.6e-64 Score=504.73 Aligned_cols=399 Identities=31% Similarity=0.540 Sum_probs=343.5
Q ss_pred CCchHHHHHHHhhhcccCC--CCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCC
Q 012138 36 SSSSQQLINLEYEYSAHNY--HPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRA 113 (470)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~ 113 (470)
.+++.+++++.+++....+ .+.|+++++++|+|+||.||++||||.+++++.++||+||+|.+++.+|++++.+....
T Consensus 12 ~~~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~~~ 91 (457)
T PRK05639 12 GPKAKELIEREKRVLSPGIGVKLFPLVPKRGFGALIEDVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMIG 91 (457)
T ss_pred CCCHHHHHHHHHHhhccccCcCCCCceEEeeecCEEEeCCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccccccC
Confidence 4557778877777766554 34699999999999999999999999999999999999999999999999987654432
Q ss_pred -CCCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCC-
Q 012138 114 -FYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD- 189 (470)
Q Consensus 114 -~~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~- 189 (470)
+.++...+++++|++..+ .++++|++||+||++.|+|+++.+ +++..||.+.++|||++.+++++++.
T Consensus 92 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~--------tgr~~ii~~~~~yHG~t~~a~s~~~~~ 163 (457)
T PRK05639 92 YTHSERAIRVAEKLAEISPIENPKVLFGLSGSDAVDMAIKVSKFS--------TRRPWILAFIGAYHGQTLGATSVAAFQ 163 (457)
T ss_pred ccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHh--------cCCCeEEEECCCcCCccHHHHHHcCCC
Confidence 345677899999999875 479999999999999999999986 36678999999999999999988764
Q ss_pred cccccCCCCCCCCeeeecCCC-------------H--------HHHHHHHHh---cCCCeEEEEEccccCCCccccCChh
Q 012138 190 NEAIRGFGPLLPGHLKVDFGD-------------I--------TALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDG 245 (470)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d-------------~--------~~Le~~l~~---~~~~~~~vi~epi~n~~G~~~~~~~ 245 (470)
..++..|.+..+++..+|+++ . +.|++.+.. .++++++||+||+++.+|.+.|+++
T Consensus 164 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~ 243 (457)
T PRK05639 164 SSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPEN 243 (457)
T ss_pred cccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHH
Confidence 345566777777777777753 2 235555432 2468999999999999999999999
Q ss_pred hHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcCCccCCCC
Q 012138 246 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG 325 (470)
Q Consensus 246 ~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~ 325 (470)
|+++|+++|++||++||+||||+||||+|.+|+++++++.||+++|||+++||+ |+|++++++++++. ....+.+||+
T Consensus 244 yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~gK~l~gG~-pi~av~~~~~i~~~-~~~~~~~T~~ 321 (457)
T PRK05639 244 FFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEVKPDLIIFGKGVASGM-GLSGVIGRKELMDL-TSGSALLTPA 321 (457)
T ss_pred HHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCCCCCEEEechhhcCCC-cceeEEehHHHHhh-cCCCcccCCC
Confidence 999999999999999999999999999999999999999999999999999997 99999999999984 3445678999
Q ss_pred CCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC---chhHHHHHHHH
Q 012138 326 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL---PVSAYDICLKM 402 (470)
Q Consensus 326 ~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~l 402 (470)
+||++|+++.++|+.++++++.+++++++++|++.|+++..++| .+.++++.|+|+.+++..+.. ......+.+.|
T Consensus 322 g~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~ 400 (457)
T PRK05639 322 ANPVISAAAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESFE-VIGDVRGKGLMIGVEIVKENGKPDPELTGKICWRA 400 (457)
T ss_pred cCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhCC-CEEeeccceeEEEEEEecCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988885 889999999999999854321 12356788999
Q ss_pred HHcCceeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHhcccC
Q 012138 403 KERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 403 ~~~Gv~~~~~~--~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
+++|+++.+.+ .+.+||.||+.+|++|+++++++|+++++ ++.
T Consensus 401 ~~~Gv~~~~~g~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~-~~~ 445 (457)
T PRK05639 401 FELGLILPSYGMFGNVIRITPPLVITKEIAEKGLEIMERAIK-DAL 445 (457)
T ss_pred HhCCeEEeecCCCCCEEEEeCCCccCHHHHHHHHHHHHHHHH-HHH
Confidence 99999997654 58999999999999999999999999998 764
No 23
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-63 Score=501.61 Aligned_cols=401 Identities=30% Similarity=0.543 Sum_probs=348.1
Q ss_pred chHHHHHHHhhhcccCC--CCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCC-CC
Q 012138 38 SSQQLINLEYEYSAHNY--HPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSR-AF 114 (470)
Q Consensus 38 ~~~~~~~~~~~~~~~~~--~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~ 114 (470)
+++++++.+++|..+.+ ...|+++++++|+++||.|||+||||.+++++.++||+||+|.+++.+|++++.+... .+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~~~~ 82 (445)
T PRK08593 3 KAHQLIQEDEHYFAKSGRIKYYPLVIDHGYGATLTDVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPAYM 82 (445)
T ss_pred hHHHHHHHHHHhhccccccCCCCceEEeeeeCEEEeCCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCcccccc
Confidence 45677888877766654 3468999999999999999999999999999999999999999999999998776543 35
Q ss_pred CCCcHHHHHHHHhhhhC-C--CeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCc-
Q 012138 115 YNDKFPVFAERLTSMFG-Y--DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDN- 190 (470)
Q Consensus 115 ~~~~~~~l~~~l~~~~~-~--~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~- 190 (470)
.++...+++++|++..+ . ++|+|++||+||++.|+|+++.+ .|+.+||.++++|||++.+++++++..
T Consensus 83 ~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~~--------tgr~~ii~~~~~YHG~t~~als~s~~~~ 154 (445)
T PRK08593 83 YHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAY--------TGRPYIISFTNAYHGSTYGSLSMSGISL 154 (445)
T ss_pred CCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHh--------hCCCeEEEECCCcCCCcHHHHhhcCCCc
Confidence 67888999999999874 2 68999999999999999999986 367789999999999999999888743
Q ss_pred ccccCCCCCCCCeeeecCCCH-----------------HHHHHHHHhc--CCCeEEEEEccccCCCccccCChhhHHHHH
Q 012138 191 EAIRGFGPLLPGHLKVDFGDI-----------------TALEKIFKES--GDQIAGFLFEPIQGEAGVIIPPDGYLKAVR 251 (470)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~-----------------~~Le~~l~~~--~~~~~~vi~epi~n~~G~~~~~~~~l~~l~ 251 (470)
.++..|.+..+++..+|++|. +++++++.+. .+++++||+||+++.+|.+.|+++|+++|+
T Consensus 155 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~ 234 (445)
T PRK08593 155 NMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALY 234 (445)
T ss_pred ccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHH
Confidence 345667777777776766532 4455555432 358999999999999999988999999999
Q ss_pred HHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHH
Q 012138 252 DLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLAS 331 (470)
Q Consensus 252 ~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~ 331 (470)
++|++||++||+||||+||||+|.+|+++++++.||++++||+++||+ |+|++++++++++.+....+.+|+++||++|
T Consensus 235 ~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~t~gK~l~~G~-p~gav~~~~~i~~~~~~~~~~~T~~~~pl~~ 313 (445)
T PRK08593 235 KFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPDLMSFGKSLAGGM-PMSAIVGRKEIMESLEAPAHLFTTGANPVSC 313 (445)
T ss_pred HHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCCEeeecccccCCc-ccEEEEEcHHHHhhhccCCCCCCCCCCHHHH
Confidence 999999999999999999999999988999999999999999999997 9999999999999987667788999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC-----chhHHHHHHHHHHcC
Q 012138 332 AVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-----PVSAYDICLKMKERG 406 (470)
Q Consensus 332 aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~-----~~~~~~~~~~l~~~G 406 (470)
+++.++|+.++++++.+++++++++|++.|+++..++| .+.++++.|+++.+++..+.. ......++..|+++|
T Consensus 314 aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~G 392 (445)
T PRK08593 314 AAALATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYN-FVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEHG 392 (445)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCC-cEEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCC
Confidence 99999999999989999999999999999999988886 899999999999998864210 123567889999999
Q ss_pred ceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccCCCC
Q 012138 407 ILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMR 449 (470)
Q Consensus 407 v~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~~~ 449 (470)
|++.+...+.+||+||+.+|++||++++++|+++++ ++....
T Consensus 393 v~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~-~~~~~~ 434 (445)
T PRK08593 393 VVIIAVAGNVLRFQPPLVITYEQLDTALNTIEQAFT-ALEAGK 434 (445)
T ss_pred eEEeccCCCEEEEECCCccCHHHHHHHHHHHHHHHH-HHhccc
Confidence 999776678999999999999999999999999999 875533
No 24
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-63 Score=503.04 Aligned_cols=399 Identities=30% Similarity=0.529 Sum_probs=339.5
Q ss_pred CCchHHHHHHHhhhcccCCC-CCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCC-C
Q 012138 36 SSSSQQLINLEYEYSAHNYH-PVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSR-A 113 (470)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~ 113 (470)
.+++.++.+...++....+. +.|+++++++|+++||.||++||||.+++++.++||+||+|.+++.++++++.+... .
T Consensus 16 ~~~s~~~~~~~~~~~~~~~~~~~p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~ 95 (443)
T PRK06058 16 GPKSQALAERRAAAVAAGVGSTLPVYVARAGGGIVEDVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHTCFMV 95 (443)
T ss_pred CccHHHHHHHHHHhhccccccCCCceEEeeeeeEEEeCCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccCccccc
Confidence 35677788776677666653 568999999999999999999999999999999999999999999999998764433 2
Q ss_pred CCCCcHHHHHHHHhhhhC---CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCC-
Q 012138 114 FYNDKFPVFAERLTSMFG---YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD- 189 (470)
Q Consensus 114 ~~~~~~~~l~~~l~~~~~---~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~- 189 (470)
+.++...+++++|++.++ .++++|++||+||++.|+++++.+ .|+..||++.++|||++.+++++++.
T Consensus 96 ~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~--------tgr~~ii~~~~~yHG~t~~al~~~~~~ 167 (443)
T PRK06058 96 TPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIARSY--------TGRQAVVVFDHAYHGRTNLTMALTAKS 167 (443)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHh--------hCCCeEEEECCCcCcChHHHHhhcCCC
Confidence 456778899999999874 268999999999999999999986 25668999999999999999988764
Q ss_pred cccccCCCCCCCCeeeec----CCCH--------HHHHHHH---Hh--cCCCeEEEEEccccCCCccccCChhhHHHHHH
Q 012138 190 NEAIRGFGPLLPGHLKVD----FGDI--------TALEKIF---KE--SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRD 252 (470)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~----~~d~--------~~Le~~l---~~--~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~ 252 (470)
..++..|.+..+++..+| ++++ +.+++.+ ++ .++++++||+||+++.+|.+.|+++|+++|++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~ 247 (443)
T PRK06058 168 MPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLE 247 (443)
T ss_pred cccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHH
Confidence 235556666656544433 3331 2222222 11 13589999999999999999999999999999
Q ss_pred HHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHH
Q 012138 253 LCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASA 332 (470)
Q Consensus 253 l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~a 332 (470)
+|++||+++|+||||+||||+|.+|+++++++.||+++++|+++||+ |+|++++++++++.+....+++||++||++|+
T Consensus 248 lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv~~gK~l~~G~-Pi~av~~~~~i~~~~~~~~~~~T~~gnpl~~a 326 (443)
T PRK06058 248 WCRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLITTAKGIAGGL-PLSAVTGRAEIMDAPHPGGLGGTYGGNPVACA 326 (443)
T ss_pred HHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEEEEcccccCCC-ccEEEEEcHHHHhhccCCCCCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999997 99999999999999987788999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC----chhHHHHHHHHHHcCce
Q 012138 333 VAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL----PVSAYDICLKMKERGIL 408 (470)
Q Consensus 333 aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~~l~~~Gv~ 408 (470)
++.++|+.++++++.+++++++++++++|+++..++| .+.++++.|+|+++++..+.. ......+.+.|+++||+
T Consensus 327 aa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~ 405 (443)
T PRK06058 327 AALAAIETIEEDDLVARARQIEALMTDRLRALAAEDD-RIGDVRGRGAMIAIELVKPGTTEPDAELTKALAAAAHAAGVI 405 (443)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCC-cEEeeeccceEEEEEEecCCCCCCcHHHHHHHHHHHHHCCeE
Confidence 9999999999899999999999999999999988775 888999999999999854311 12356788889999999
Q ss_pred eccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 409 AKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 409 ~~~~~--~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
+.+++ ++++||.||+++|+++|++++++|+++++ ++
T Consensus 406 ~~~~~~~~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~-~~ 443 (443)
T PRK06058 406 VLTCGTYGNVIRLLPPLVIGDELLREGLDVLEAALA-DL 443 (443)
T ss_pred EeccCCCCCEEEEECCCccCHHHHHHHHHHHHHHHH-hC
Confidence 98754 58999999999999999999999999997 53
No 25
>PRK07480 putative aminotransferase; Validated
Probab=100.00 E-value=9.7e-64 Score=503.98 Aligned_cols=402 Identities=29% Similarity=0.458 Sum_probs=337.5
Q ss_pred hHHHHHHHhhhcccCCC-------CCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccC
Q 012138 39 SQQLINLEYEYSAHNYH-------PVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSS 111 (470)
Q Consensus 39 ~~~~~~~~~~~~~~~~~-------~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~ 111 (470)
+.++++.+.++.++.+. ..|+++++++|+|+||.||++||||.+++++.++||+||+|.+++.+|++++.+.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~ 86 (456)
T PRK07480 7 TAELQALDAAHHLHPFSDMKALNEKGSRVITRAEGVYLWDSEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYN 86 (456)
T ss_pred HHHHHhhhhcccccCcccccccccCCCceEEeceeeEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcc
Confidence 35566655566544432 24789999999999999999999999999999999999999999999999876543
Q ss_pred C--CCCCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhccc
Q 012138 112 R--AFYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMS 187 (470)
Q Consensus 112 ~--~~~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~ 187 (470)
. .+.++...+++++|++..+ .++++|++||+||++.|+|+++.|+... | .+++.+||.+.++|||++.++++++
T Consensus 87 ~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~-g-~~~r~~ii~~~~~yHG~tl~a~s~~ 164 (456)
T PRK07480 87 TFFKTTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEANDTVLRMVRHYWALK-G-KPQKKVIISRKNGYHGSTVAGASLG 164 (456)
T ss_pred cccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhc-C-CCCCcEEEEECCCcCCcchhhhhcc
Confidence 3 3567888999999999884 5799999999999999999999863221 1 1356789999999999999999998
Q ss_pred CCcccccCCCCCCCCeeeecCC---------------C--HHHHHHHHHh-cCCCeEEEEEccccCCCccccCChhhHHH
Q 012138 188 CDNEAIRGFGPLLPGHLKVDFG---------------D--ITALEKIFKE-SGDQIAGFLFEPIQGEAGVIIPPDGYLKA 249 (470)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~---------------d--~~~Le~~l~~-~~~~~~~vi~epi~n~~G~~~~~~~~l~~ 249 (470)
+.+.++..+.+..+++..++++ + +++|++.+.+ .++++++||+||+++.+|.+.|+++|+++
T Consensus 165 g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~ 244 (456)
T PRK07480 165 GMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPE 244 (456)
T ss_pred CChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHH
Confidence 7655555555545554444432 1 3667655543 34689999999999999999999999999
Q ss_pred HHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcC--c--CCccCCCC
Q 012138 250 VRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQ--P--GEHGSTFG 325 (470)
Q Consensus 250 l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~--~--~~~~~t~~ 325 (470)
|+++|++||++||+||||+||||+|++|+++++++.||+++|||+++||++|+|++++++++++.+. . ..+++||+
T Consensus 245 lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~ 324 (456)
T PRK07480 245 IQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLMTIAKGLTSGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYS 324 (456)
T ss_pred HHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCCeeeeehhhccCCccceEEEEcHHHHHHHhcCCCCcccCCCCC
Confidence 9999999999999999999999999999999999999999999999999779999999999999872 2 35889999
Q ss_pred CCHHHHHHHHHHHHHHhhhhHHHHH-HHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC---c-----hhHH
Q 012138 326 GNPLASAVAIASLDVIRDEKLAERS-AHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL---P-----VSAY 396 (470)
Q Consensus 326 ~~~~~~aaa~a~l~~~~~~~~~~~~-~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~---~-----~~~~ 396 (470)
+||++|+++.++|+.++++++.+++ ++++++|++.|+++ .++| .+.++++.|+|+++++..+.. . ....
T Consensus 325 gnpl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~~l~~l-~~~~-~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~ 402 (456)
T PRK07480 325 GHPVAAAVALANLRILRDEGIVERVRDDTGPYLQKRLREL-ADHP-LVGEVRGVGLVGAIELVKDKATRERFEAGGGVGT 402 (456)
T ss_pred cCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh-hcCC-CeeeEEeecceEEEEEeccccccccCcchhhHHH
Confidence 9999999999999999998999999 69999999999997 4565 789999999999999964321 0 0135
Q ss_pred HHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccC
Q 012138 397 DICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 397 ~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
.+.+.|+++||++.+. .+.+||+||+++|++||++++++|++++. ++.
T Consensus 403 ~~~~~~~~~Gll~~~~-~~~l~~~Ppl~it~~eid~~~~~l~~al~-~~~ 450 (456)
T PRK07480 403 ICRDHCFANGLIMRAV-GDRMIISPPLVITHAEIDELVEKARKALD-ATA 450 (456)
T ss_pred HHHHHHHHCCcEEeec-CCEEEEECCCCCCHHHHHHHHHHHHHHHH-HHH
Confidence 6778899999999875 47899999999999999999999999998 763
No 26
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-63 Score=503.25 Aligned_cols=396 Identities=31% Similarity=0.523 Sum_probs=337.0
Q ss_pred chHHHHHHHhhh--cccCCC-CCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHcc-ccCCC
Q 012138 38 SSQQLINLEYEY--SAHNYH-PVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLT-LSSRA 113 (470)
Q Consensus 38 ~~~~~~~~~~~~--~~~~~~-~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~~ 113 (470)
+++++++.+.+| ..+.|. +.|+++++++|+|+||.||++||||.+++++.++||+||+|.+++.+|+++.. +.+..
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~~~ 97 (459)
T PRK06931 18 TNETYLARQAEFESNVRSYPRKLPLAIAKAQGVWVTDVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTLD 97 (459)
T ss_pred chHHHHHHHHhhhhhccccccCCCceEEeccccEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhccccccc
Confidence 345677776654 333343 57999999999999999999999999999999999999999999999998633 22333
Q ss_pred CCCCcHHHHHHHHhhhhCC-----CeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccC
Q 012138 114 FYNDKFPVFAERLTSMFGY-----DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 188 (470)
Q Consensus 114 ~~~~~~~~l~~~l~~~~~~-----~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~ 188 (470)
+.++...+++++|.+..+. ..++++|||+||++.|+|+++.+ .++.+||.+.++|||++.+++++++
T Consensus 98 ~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~--------tgr~~Ii~~~~~yHG~t~~als~t~ 169 (459)
T PRK06931 98 LTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTY--------TGRSNVISFSGGYHGMTHGALAVTG 169 (459)
T ss_pred cCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHHHh--------cCCCeEEEECCCcCCccHHHHhhcC
Confidence 5677889999999988742 23567799999999999999986 3677999999999999999999988
Q ss_pred CcccccCCCCCCCCeeeecCCC-------------HHHH----HHHHHh---cCCCeEEEEEccccCCCccccCChhhHH
Q 012138 189 DNEAIRGFGPLLPGHLKVDFGD-------------ITAL----EKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLK 248 (470)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d-------------~~~L----e~~l~~---~~~~~~~vi~epi~n~~G~~~~~~~~l~ 248 (470)
.+.++..|.+..+++..+|+++ .+.+ ++.+.+ ..+++++||+||+++.+|.+.|+++|++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~ 249 (459)
T PRK06931 170 NLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQ 249 (459)
T ss_pred CcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHH
Confidence 7777777777777776666553 2333 333332 2246999999999999999999999999
Q ss_pred HHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcCCccCCCCCCH
Q 012138 249 AVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNP 328 (470)
Q Consensus 249 ~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~ 328 (470)
+|+++|++||++||+||||+||||+|++|+++++++.||+++++|+++||+ |+|++++++++ +.+.+..+++||++||
T Consensus 250 ~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt~gK~l~gG~-Pi~av~~~~~~-~~~~~~~~~~T~~gnp 327 (459)
T PRK06931 250 KIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIVMSKAVGGGL-PLAVLGIKKEF-DAWQPGGHTGTFRGNQ 327 (459)
T ss_pred HHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEEecccccCCc-ceeeeeeHHHH-hhccCCCCCCCCCCCH
Confidence 999999999999999999999999999999999999999999999999997 99999988774 7776677999999999
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC-----------chhHHH
Q 012138 329 LASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-----------PVSAYD 397 (470)
Q Consensus 329 ~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~-----------~~~~~~ 397 (470)
++|+++.++|+.++++++.+++++++++|++.|+++..++| .+.++++.|+|+++++..+.. ......
T Consensus 328 la~aaala~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~-~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~ 406 (459)
T PRK06931 328 LAMATGLTTLKILKEENLAQNAAERGEWLKAQLAELQKRYP-CIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAA 406 (459)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCC-CeEeEecCceEEEEEEccCcccccccccCCccHHHHHH
Confidence 99999999999999999999999999999999999988886 889999999999999954310 012456
Q ss_pred HHHHHHHcCceeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 398 ICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 398 ~~~~l~~~Gv~~~~~~--~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
+.+.|+++||++.+.+ ++++||.||+++|++||++++++|++++. ++
T Consensus 407 ~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~-~~ 455 (459)
T PRK06931 407 IQKACFENGLLLERGGRNGNVVRLLPPLLITQAECEEFIDRFEQALL-AA 455 (459)
T ss_pred HHHHHHHCCcEEeecCCCCCEEEEECCCCcCHHHHHHHHHHHHHHHH-HH
Confidence 8888999999997653 68999999999999999999999999998 64
No 27
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=1.8e-63 Score=496.12 Aligned_cols=389 Identities=37% Similarity=0.600 Sum_probs=347.0
Q ss_pred cccCCCCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhh
Q 012138 50 SAHNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSM 129 (470)
Q Consensus 50 ~~~~~~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 129 (470)
....+.+.|+++.+++|+|+||.||++||||.+++++.++||+||+|.+++.+|++++.+....+.++...+++++|.+.
T Consensus 15 ~~~~~~~~~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~ 94 (408)
T PRK04612 15 YLPVYRPRQVVLERGQGSRVWDDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSNVFYSAPPLKLAEELVTA 94 (408)
T ss_pred hhcccCCCCceEEEeeeCEEEECCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhh
Confidence 33445678999999999999999999999999999999999999999999999999876655445677889999999987
Q ss_pred hC-CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecC
Q 012138 130 FG-YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF 208 (470)
Q Consensus 130 ~~-~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (470)
.+ .++++|++||+||++.|+|+++.|+.. +|.++++.+|+.+.++|||++.+++++++.+.++..|.++.+++..+++
T Consensus 95 ~~~~~~v~f~~sGseA~e~AlklAr~~~~~-~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 173 (408)
T PRK04612 95 SRFAEKVFLCNSGTEANEAAIKLVRKWASS-QGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDF 173 (408)
T ss_pred CCCCCEEEEcCchHHHHHHHHHHHHHHHHh-hCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCC
Confidence 74 479999999999999999999986432 3333456689999999999999999999887777788877777788899
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcce
Q 012138 209 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 288 (470)
Q Consensus 209 ~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi 288 (470)
+|++.+++++.. +++++|++||+++.+|.+.|+++|+++|+++|++||+++|+||||+|||++|.+++..++++.||+
T Consensus 174 ~d~~~l~~~~~~--~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pdi 251 (408)
T PRK04612 174 NDVEALEAAMAG--GDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDI 251 (408)
T ss_pred CCHHHHHHhhCC--CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCCCCCE
Confidence 999999999863 479999999999988998888899999999999999999999999999999998887778999999
Q ss_pred eeccccccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhC
Q 012138 289 VILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQF 368 (470)
Q Consensus 289 ~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~ 368 (470)
++|||++++|+ |+|++++++++++.+....+++||+++|++++++.++|+.++++++.+++++++++++++|+++..++
T Consensus 252 ~t~~K~l~~G~-piga~~~~~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~ 330 (408)
T PRK04612 252 VTLAKALGGGF-PIGAMLAGPKVAETMQFGAHGTTFGGNPLAAAVARVALRKLASPQIAANVARQSAALRAGLEALNAEF 330 (408)
T ss_pred EEEcchhcCCC-ceEEEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999997 99999999999998877778899999999999999999999989999999999999999999998888
Q ss_pred CCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 369 PNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 369 p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
+ .+.++++.|+|+.+++.... ...+..+++.|+++||++.+.+.+.+||.||+.+|++||++++++|++++. ++
T Consensus 331 ~-~i~~vrg~Gl~~~i~~~~~~-~~~a~~i~~~l~~~Gvlv~~~g~~~lRl~Ppl~it~eeid~~l~~l~~~l~-~~ 404 (408)
T PRK04612 331 G-VFAQVRGRGLMLGAVLAPAH-AGQAGAILDLAAEHGLLLLQAGPDVLRFVPALNLTDAELADGLARLRLALA-DY 404 (408)
T ss_pred C-CeeeeeccceEEEEEecCch-hhHHHHHHHHHHHCCeEEeeCCCCEEEEcCCccCCHHHHHHHHHHHHHHHH-HH
Confidence 5 88999999999999986321 124678899999999999887779999999999999999999999999998 64
No 28
>PRK12403 putative aminotransferase; Provisional
Probab=100.00 E-value=1.9e-63 Score=502.88 Aligned_cols=402 Identities=26% Similarity=0.434 Sum_probs=337.3
Q ss_pred hHHHHHHHhhhcccCCC-------CCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccC
Q 012138 39 SQQLINLEYEYSAHNYH-------PVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSS 111 (470)
Q Consensus 39 ~~~~~~~~~~~~~~~~~-------~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~ 111 (470)
.+++.+.+.++.++.+. +.|+++++++|+|+||.||++||||.+++++.++||+||+|.+++.++++++.+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~ 90 (460)
T PRK12403 11 TRDYQAADAAHHIHAFLDQKALNAEGPRVMVRGEGLHLWDNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYN 90 (460)
T ss_pred hHHHHHhhhcccccccccccccccCCCceEEeceeeEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCee
Confidence 46666666666655443 34899999999999999999999999999999999999999999999999977654
Q ss_pred C--CCCCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhccc
Q 012138 112 R--AFYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMS 187 (470)
Q Consensus 112 ~--~~~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~ 187 (470)
. .+.++...+++++|+++++ .++++|++||+||+++|+++++.|+.. +|. +++.+|+.+..+|||++.++++++
T Consensus 91 ~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AiklAr~~~~~-~g~-~~r~~ii~~~~~yHG~t~~~~s~s 168 (460)
T PRK12403 91 MFFHTTHPAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQV-LGK-PQKKIMIGRWNGYHGSTLAATALG 168 (460)
T ss_pred cccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHh-hCC-CCCcEEEEECCCcCcccHhhhhcC
Confidence 3 2356778999999999886 689999999999999999999986321 111 345678889999999999999998
Q ss_pred CCcccccCCCCCCCCeeeecCCC-----------------HHHHHHHHHh-cCCCeEEEEEccccCCCccccCChhhHHH
Q 012138 188 CDNEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKE-SGDQIAGFLFEPIQGEAGVIIPPDGYLKA 249 (470)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d-----------------~~~Le~~l~~-~~~~~~~vi~epi~n~~G~~~~~~~~l~~ 249 (470)
+...++. +.+..+++..+|+++ +++|++.+.+ ..+++++||+||+++.+|.+.|+++|+++
T Consensus 169 ~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~ 247 (460)
T PRK12403 169 GMKFMHE-MGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPE 247 (460)
T ss_pred CCccccc-cCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHH
Confidence 8654433 455555555554321 3567666643 33589999999999999999999999999
Q ss_pred HHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCc----CCccCCCC
Q 012138 250 VRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP----GEHGSTFG 325 (470)
Q Consensus 250 l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~----~~~~~t~~ 325 (470)
|+++|++||++||+||||+||||+|++|+++++++.||+++++|+++||++|+|++++++++++.+.. ..+++||+
T Consensus 248 lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~gK~lggG~~Piga~v~~~~i~~~~~~~~~~~~~~~T~~ 327 (460)
T PRK12403 248 IQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYS 327 (460)
T ss_pred HHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCCCeEEEcccccccccceEEEEECHHHHHHHhcCCCccccCCCCC
Confidence 99999999999999999999999999999999999999999999999996699999999999988743 24788999
Q ss_pred CCHHHHHHHHHHHHHHhhhhHHHHHH-HHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC---c-----hhHH
Q 012138 326 GNPLASAVAIASLDVIRDEKLAERSA-HLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL---P-----VSAY 396 (470)
Q Consensus 326 ~~~~~~aaa~a~l~~~~~~~~~~~~~-~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~---~-----~~~~ 396 (470)
+||++|+++.++|+.++++++.++++ ++++++++.|+++..++| .+.++++.|+|+++++..+.. . ....
T Consensus 328 gnPl~~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~L~~l~~~~~-~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~ 406 (460)
T PRK12403 328 GHPVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDHP-LVGEVQGAGLVAALQFAEDKATRKRFANENDLAW 406 (460)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhcCC-CEEeEeecceEEEEEEccCccccccccchhHHHH
Confidence 99999999999999999888999996 999999999999888886 899999999999999964321 0 1133
Q ss_pred HHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccC
Q 012138 397 DICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 397 ~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
.+.+.|+++||++.+. .+.+||+||+++|++|+++++++|++++. ++.
T Consensus 407 ~~~~~~~~~Gll~~~~-~~~~~l~Ppl~it~~eid~~~~~l~~al~-~~~ 454 (460)
T PRK12403 407 RCRTIGFEEGVIIRST-LGRMIMAPALVAGRAEIDELVDKTRIAVD-RTA 454 (460)
T ss_pred HHHHHHHhCCEEEEec-CCEEEEECCCCCCHHHHHHHHHHHHHHHH-HHH
Confidence 4567778999999765 35789999999999999999999999998 763
No 29
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=100.00 E-value=8.1e-64 Score=508.19 Aligned_cols=385 Identities=28% Similarity=0.452 Sum_probs=329.5
Q ss_pred CCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCC--CCCCCcHHHHHHHHhhhh-C-
Q 012138 56 PVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSR--AFYNDKFPVFAERLTSMF-G- 131 (470)
Q Consensus 56 ~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~-~- 131 (470)
+.|+++++++|+|+||.|||+||||.+++++.++||+||+|++++.++++++.+... .+.++...+++++|.+.+ +
T Consensus 70 ~~p~~i~~~~G~~l~D~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~ 149 (504)
T PLN02760 70 LEPLVIEKSEGSYVYDINGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTAR 149 (504)
T ss_pred CCCceEEeeeeeEEEECCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcCCC
Confidence 368999999999999999999999999999999999999999999999998765432 346788899999999885 2
Q ss_pred -CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCC
Q 012138 132 -YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD 210 (470)
Q Consensus 132 -~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (470)
.++++|++||+||++.|+++++.|+. .+|. +++.+||.++++|||++.+++++++.+.++..|.+..+.+..+++++
T Consensus 150 ~~~~v~f~~SGsEA~e~AlKlAr~~~~-~~g~-~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~ 227 (504)
T PLN02760 150 KMGKVFFTNSGSEANDTQVKLVWYYNN-ALGR-PNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPH 227 (504)
T ss_pred CCCEEEEeCChHHHHHHHHHHHHHHHH-hcCC-CCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCc
Confidence 46899999999999999999987531 1121 34678999999999999999998887666556655444443333211
Q ss_pred ------------------HHHHHHHHHh-cCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCc
Q 012138 211 ------------------ITALEKIFKE-SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 271 (470)
Q Consensus 211 ------------------~~~Le~~l~~-~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g 271 (470)
.++|++++.. .++++++||+||+++.+|.+.|+++|+++|+++|++||++||+||||+|||
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfG 307 (504)
T PLN02760 228 YWRFHLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFG 307 (504)
T ss_pred ccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCc
Confidence 2457877753 335799999999999999999999999999999999999999999999999
Q ss_pred ccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCc-------CCccCCCCCCHHHHHHHHHHHHHHhhh
Q 012138 272 RSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP-------GEHGSTFGGNPLASAVAIASLDVIRDE 344 (470)
Q Consensus 272 ~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~-------~~~~~t~~~~~~~~aaa~a~l~~~~~~ 344 (470)
|+|++|+++++++.||+++|+|+++||++|+|++++++++++.+.. ..+++||++||++|+++.++|+.++++
T Consensus 308 RtG~~~a~e~~gv~PDivtlgK~lggG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~~ 387 (504)
T PLN02760 308 RLGTMFGCDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKER 387 (504)
T ss_pred ccchhhHHHhcCCCCcEEEecccccCCccccceEeecHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999997799999999999998753 258899999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCc--------hhHHHHHHHHHHcCceeccCCCCE
Q 012138 345 KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP--------VSAYDICLKMKERGILAKPTHDTI 416 (470)
Q Consensus 345 ~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~--------~~~~~~~~~l~~~Gv~~~~~~~~~ 416 (470)
++.+++++++++|++.|+++ .++| .+.++++.|+|+++++..+... .....+++.|+++||++.+.+ +.
T Consensus 388 ~l~~~~~~~g~~l~~~L~~l-~~~~-~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-~~ 464 (504)
T PLN02760 388 NIPEHVNKIAPRFQDGIKAF-SGSP-IIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVAG-DN 464 (504)
T ss_pred CHHHHHHHHHHHHHHHHHHH-hcCC-CeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEecC-CE
Confidence 99999999999999999998 5565 8889999999999999653210 125568889999999998754 68
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHhcccC
Q 012138 417 VRLTPPLSISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 417 iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
+||+||+++|++||++++++|+++++ ++.
T Consensus 465 lrl~Ppl~it~eeid~~~~~l~~al~-~~~ 493 (504)
T PLN02760 465 IMMSPPLIITPEEVDELISIYGKALK-ATE 493 (504)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHH-HHH
Confidence 99999999999999999999999998 763
No 30
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=4.5e-63 Score=495.88 Aligned_cols=396 Identities=34% Similarity=0.609 Sum_probs=343.7
Q ss_pred HHHHHHHhhhcccCCCCC-ceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCC-CCCCC
Q 012138 40 QQLINLEYEYSAHNYHPV-PIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSR-AFYND 117 (470)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~-p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~ 117 (470)
+++.+....+....+.+. |+++++++|+|+||.||++||||.+++++.++||+||+|.+++.+|++++.+... .+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~ 83 (425)
T PRK07495 4 TSLTDRRNAAISRGVGMTTQIYADRAENAEIWDKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCHQVVPYE 83 (425)
T ss_pred HHHHHHHHhhhccccCcCCCeeEEeeeecEEEeCCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCcccCccCCH
Confidence 445555444445555444 8999999999999999999999999999999999999999999999998765432 45677
Q ss_pred cHHHHHHHHhhhhC---CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCC-cccc
Q 012138 118 KFPVFAERLTSMFG---YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD-NEAI 193 (470)
Q Consensus 118 ~~~~l~~~l~~~~~---~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~-~~~~ 193 (470)
...+++++|++..+ .++++|++||+||++.|+|+++.+ +|+..|+.+.++|||++.+++++++. ..++
T Consensus 84 ~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~AlklAr~~--------tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~ 155 (425)
T PRK07495 84 NYVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIARAA--------TGRSAVIAFGGGFHGRTFMGMSLTGKVVPYK 155 (425)
T ss_pred HHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHh--------hCCCeEEEECCCcCCccHHHhhhcCCCcccc
Confidence 78999999999874 268999999999999999999986 35678999999999999999888775 3466
Q ss_pred cCCCCCCCCeeeecCCC----------HHHHHHHHHh--cCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEE
Q 012138 194 RGFGPLLPGHLKVDFGD----------ITALEKIFKE--SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILM 261 (470)
Q Consensus 194 ~~~~~~~~~~~~~~~~d----------~~~Le~~l~~--~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gill 261 (470)
..|.+..+++..+|+++ ++++++++++ .++++++||+||+++.+|.+.++++|+++|+++|++||+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~ll 235 (425)
T PRK07495 156 VGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILL 235 (425)
T ss_pred cCCCCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence 77788777878888764 5566877763 23579999999999999988889999999999999999999
Q ss_pred EEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHH
Q 012138 262 IADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVI 341 (470)
Q Consensus 262 I~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~ 341 (470)
|+||||+|||++|.+|+++++++.||+++|||+++||+ |+|++++++++++.+....+++||++||++++++.++++++
T Consensus 236 I~DEv~tG~gr~G~~~a~~~~gv~pDi~tlsK~l~~G~-pigav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l 314 (425)
T PRK07495 236 IADEVQTGFARTGKLFAMEHHEVAADLTTMAKGLAGGF-PLAAVTGRAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVI 314 (425)
T ss_pred EEechhhcCCcCCCceeecccCCCCCEEeehhhhcCCc-cceEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999988999999999999999999997 99999999999999887788899999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC----chhHHHHHHHHHHcCceeccCC--CC
Q 012138 342 RDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL----PVSAYDICLKMKERGILAKPTH--DT 415 (470)
Q Consensus 342 ~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~~l~~~Gv~~~~~~--~~ 415 (470)
+++++.+++++++++++++|+++..++| .+..+++.|+|+++++..+.. ......+.+.|+++|+++.+.+ ++
T Consensus 315 ~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g~~~~ 393 (425)
T PRK07495 315 EEEDLCERANQLGNRLKQRLASLRETVP-EIADIRGPGFMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTCGVHGN 393 (425)
T ss_pred HhchHHHHHHHHHHHHHHHHHHHHhhCC-CeeeeecCceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeecCCCCC
Confidence 9889999999999999999999988886 788999999999999964321 1124578889999999987643 58
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHhcccC
Q 012138 416 IVRLTPPLSISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 416 ~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
.+||.||+++|++|+++++++|+++++ +++
T Consensus 394 ~~r~~Ppl~it~~~id~~~~~l~~~l~-~~~ 423 (425)
T PRK07495 394 VIRFLAPITIQDDVFAEALDILEASIL-EAS 423 (425)
T ss_pred EEEEeCCCccCHHHHHHHHHHHHHHHH-HHh
Confidence 999999999999999999999999998 764
No 31
>PRK07036 hypothetical protein; Provisional
Probab=100.00 E-value=3.2e-63 Score=501.57 Aligned_cols=399 Identities=27% Similarity=0.457 Sum_probs=339.0
Q ss_pred HHHHHHhhhcccCCC-------CCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCC-
Q 012138 41 QLINLEYEYSAHNYH-------PVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSR- 112 (470)
Q Consensus 41 ~~~~~~~~~~~~~~~-------~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~- 112 (470)
++++.+++|.++.+. ..|+++++++|+|+||.||++||||.+++++.++||+||+|.+++.+|++++.+...
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~ 89 (466)
T PRK07036 10 ALAQADKRHLLHPWHDFSSLGKEGSLVIVEAEGIYVTDADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPF 89 (466)
T ss_pred HHHHHhhcccccCccCccccccCCCceEEeCceeEEEECCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccc
Confidence 345556667665543 248899999999999999999999999999999999999999999999998765433
Q ss_pred -CCCCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCC
Q 012138 113 -AFYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD 189 (470)
Q Consensus 113 -~~~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~ 189 (470)
.+.++...+++++|.+..+ .++++|++||+||++.|+|+++.++.. +| .+++.+||.+.++|||++.+++++++.
T Consensus 90 ~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~-~g-~t~r~~Ii~~~~~YHG~t~~a~s~~~~ 167 (466)
T PRK07036 90 GDMTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHYYFNV-RG-RPAKKHIITRGDAYHGSTYLTASLTGK 167 (466)
T ss_pred cccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHh-cC-CCCccEEEEEcCccCCccHhhhcccCC
Confidence 2567888999999999874 679999999999999999999875321 11 134678999999999999999999887
Q ss_pred cccccCCCCCCCCeeeecCCC-----------------HHHHHHHHHh-cCCCeEEEEEccccCCCccccCChhhHHHHH
Q 012138 190 NEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKE-SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVR 251 (470)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d-----------------~~~Le~~l~~-~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~ 251 (470)
+.++..|.+..+++..+++++ ++.+++.+.. .++++++||+||+++.+|.+.|+++|+++|+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr 247 (466)
T PRK07036 168 AADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMR 247 (466)
T ss_pred CcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHH
Confidence 777777777665555444322 2456666654 3468999999999999999999999999999
Q ss_pred HHHHhcCcEEEEeccccCCcccCCccccc-cCCCCcceeeccccccCCCcceeEEEecHHHHhhcCc-------CCccCC
Q 012138 252 DLCSKYNILMIADEIQSGLARSGRMLASD-WEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP-------GEHGST 323 (470)
Q Consensus 252 ~l~~~~gillI~Dev~~g~g~~G~~~~~~-~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~-------~~~~~t 323 (470)
++|++||+++|+|||++||||+|++|+++ ++++.||++++||+++||++|+|++++++++++.+.. ..+++|
T Consensus 248 ~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T 327 (466)
T PRK07036 248 EICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPDIITFAKGLTSGYQPLGAVIISERLLDVISGPNAKGNVFTHGFT 327 (466)
T ss_pred HHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEEEEccccccCccccEEEEEcHHHHHHHhcccCcCcccccCCC
Confidence 99999999999999999999999999887 7899999999999999996699999999999998752 257789
Q ss_pred CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC--------chhH
Q 012138 324 FGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL--------PVSA 395 (470)
Q Consensus 324 ~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~--------~~~~ 395 (470)
|++||++|+++.++|+.++++++.+++++++++|++.|+++ .++| .+.++++.|+++++++..+.. ....
T Consensus 328 ~~gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~~~L~~l-~~~~-~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~ 405 (466)
T PRK07036 328 YSGHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASL-RELP-LVGDVRGDHLMACVECVADKGSKALLPEDIAIG 405 (466)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh-ccCC-CEEEEEeeceEEEEEEccCccccCCCCchhHHH
Confidence 99999999999999999998999999999999999999987 4575 889999999999999964321 0124
Q ss_pred HHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 396 YDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 396 ~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
..+.+.|+++||++.+.+ +.+||+||+++|++||++++++|+++++ ++
T Consensus 406 ~~~~~~~~~~Gvl~~~~~-~~~~l~Ppl~it~~~id~~~~~l~~al~-~~ 453 (466)
T PRK07036 406 QRIDRHCQERGLLVRPLE-HLCVLSPPLIITRAQIDEIVAILRAAIE-ET 453 (466)
T ss_pred HHHHHHHHHCCcEEeecC-CEEEEeCCCcCCHHHHHHHHHHHHHHHH-HH
Confidence 578889999999998764 7899999999999999999999999998 76
No 32
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=2e-63 Score=497.94 Aligned_cols=397 Identities=28% Similarity=0.469 Sum_probs=339.6
Q ss_pred HHHHHHHhhhcccCCC----CCc-eEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCC-C
Q 012138 40 QQLINLEYEYSAHNYH----PVP-IVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSR-A 113 (470)
Q Consensus 40 ~~~~~~~~~~~~~~~~----~~p-~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~ 113 (470)
+++.+.+.++.++.+. +.| +++++++|+|+||.||++||||.+++++.++||+||+|.+++.+|++++.+... .
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~ 83 (429)
T PRK06173 4 QELLELDRQHIWHPYSSVTDPIPVYPVERADGVMITLKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMFGG 83 (429)
T ss_pred HHHhhhhhcccccccccccccCCCceEEeceeeEEEcCCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccccc
Confidence 3455555666655443 234 469999999999999999999999999999999999999999999998776443 3
Q ss_pred CCCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCC-c
Q 012138 114 FYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD-N 190 (470)
Q Consensus 114 ~~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~-~ 190 (470)
+.++...+|+++|++..+ .++++|++||+||++.|+|+++.++.. ++ .+++..||++.++|||++.+++++++. +
T Consensus 84 ~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~-~g-~~~r~~ii~~~~~yHG~t~~a~s~~~~~~ 161 (429)
T PRK06173 84 FTHEPAVELAQKLLEILPPSLNKIFFADSGSVAVEVAMKMALQYQQA-KG-EVQRTKFATIRSGYHGDTWHAMSVCDPVT 161 (429)
T ss_pred cCCHHHHHHHHHHHhhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHH-hC-CCCCcEEEEECCCcCCcchhhhccCCCch
Confidence 567888999999999874 689999999999999999999986321 11 245678999999999999999988764 3
Q ss_pred ccccCCCCCCCCeeeecCC-----------CHHHHHHHHHhcCCCeEEEEEccc-cCCCccccCChhhHHHHHHHHHhcC
Q 012138 191 EAIRGFGPLLPGHLKVDFG-----------DITALEKIFKESGDQIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYN 258 (470)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~-----------d~~~Le~~l~~~~~~~~~vi~epi-~n~~G~~~~~~~~l~~l~~l~~~~g 258 (470)
.++..|.+..+.+..+|++ +++.|++.+..+++++++||+||+ ++.+|.+.|+++|+++|+++|++||
T Consensus 162 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g 241 (429)
T PRK06173 162 GMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYG 241 (429)
T ss_pred hhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcC
Confidence 4556666666655555543 366788888766678999999996 9999999999999999999999999
Q ss_pred cEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCc-----CCccCCCCCCHHHHHH
Q 012138 259 ILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP-----GEHGSTFGGNPLASAV 333 (470)
Q Consensus 259 illI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~-----~~~~~t~~~~~~~~aa 333 (470)
++||+||||+||||+|++|+++++++.||+++|||+++||++|++++++++++++.+.+ ..+++||+++|++|++
T Consensus 242 ~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~gK~l~gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aa 321 (429)
T PRK06173 242 VLLIFDEIATGFGRTGKLFALEHAGVVPDIMCIGKALTGGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLACAI 321 (429)
T ss_pred CeEEecchhcCCCcCCcchHHHhcCCCCCEEEeehhhhCCccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999997699999999999998753 2578899999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCC
Q 012138 334 AIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH 413 (470)
Q Consensus 334 a~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~ 413 (470)
+.++|+.++++++.+++++++++|++.|+++ ..+| .+..+++.|+++.+++..+. ....+++.|+++||++.+.+
T Consensus 322 a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~-~~~~-~v~~vRg~Gl~~~iel~~~~---~~~~i~~~l~e~Gi~v~~~g 396 (429)
T PRK06173 322 AAESIRLLLESPWQQNIQRIEAQLKQELAPA-AEFD-SVAEVRVLGAIGVVEMKEPV---NMATLQPRFVEHGIWVRPFG 396 (429)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh-hcCC-CeeeeeccceEEEEEeCCcc---cHHHHHHHHHHCCeEEEecC
Confidence 9999999998889999999999999999986 3454 67889999999999997543 46789999999999998764
Q ss_pred CCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 414 DTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 414 ~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
+++||.||+++|++|+++++++|++++. ++
T Consensus 397 -~~l~~~Ppl~it~~ei~~~~~~l~~~l~-~~ 426 (429)
T PRK06173 397 -KLVYIMPPFIISPDELSQLTSGLLRVLK-QE 426 (429)
T ss_pred -CEEEEeCCccCCHHHHHHHHHHHHHHHH-HH
Confidence 7999999999999999999999999998 53
No 33
>PRK06541 hypothetical protein; Provisional
Probab=100.00 E-value=6.8e-63 Score=498.38 Aligned_cols=404 Identities=28% Similarity=0.467 Sum_probs=345.3
Q ss_pred CchHHHHHHHhhhcccCCCC-------CceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccc
Q 012138 37 SSSQQLINLEYEYSAHNYHP-------VPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTL 109 (470)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~-------~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~ 109 (470)
.++.++.+..+++.++.|.. .|+++++++|+|+||.||++||||.+++++.++||+||+|.+++.+|++++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~ 86 (460)
T PRK06541 7 NSDTDLQALAKRHLWMHFTRHGAYIDAPVPVIVRGEGCYIWDDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAF 86 (460)
T ss_pred ccHHHHHHHhhcccccCccCccccccCCCceEEeCcccEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcC
Confidence 45677788778888776542 26889999999999999999999999999999999999999999999998765
Q ss_pred cCC-CCCCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcc
Q 012138 110 SSR-AFYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISM 186 (470)
Q Consensus 110 ~~~-~~~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~ 186 (470)
... .+.++...+++++|++..+ .++++|++||+||++.|+|+++.|+.. +|. +++..||.+.++|||++.+++++
T Consensus 87 ~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~-~g~-~~r~~ii~~~~~yHG~t~~a~s~ 164 (460)
T PRK06541 87 FPLWSYAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKL-TGK-PGKHKVISRAIAYHGTTQGALAI 164 (460)
T ss_pred ccccccCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHHHHHHHHh-cCC-CCccEEEEEcCcccCcchhhhcC
Confidence 433 4667888999999999863 579999999999999999999986321 111 35679999999999999999999
Q ss_pred cCCcccccCCCCCCCCeeeecCCC------------------HHHHHHHHHhc-CCCeEEEEEccccCCCccccCChhhH
Q 012138 187 SCDNEAIRGFGPLLPGHLKVDFGD------------------ITALEKIFKES-GDQIAGFLFEPIQGEAGVIIPPDGYL 247 (470)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d------------------~~~Le~~l~~~-~~~~~~vi~epi~n~~G~~~~~~~~l 247 (470)
++.+.++..|.+..+++..+|+++ ++.++++++.. ++++++||+||+++++|.+.|+++|+
T Consensus 165 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl 244 (460)
T PRK06541 165 TGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYF 244 (460)
T ss_pred cCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHH
Confidence 887777777777777766555332 36788888643 35799999999999999999899999
Q ss_pred HHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcC----CccCC
Q 012138 248 KAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG----EHGST 323 (470)
Q Consensus 248 ~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~----~~~~t 323 (470)
++|+++|++||++||+||||+||||+|++|+++++++.||+++|||+++||++|+|++++++++++.+... .+++|
T Consensus 245 ~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt~gK~l~~G~~pigav~~~~~i~~~~~~~~~~~~~~~T 324 (460)
T PRK06541 245 ERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIITCAKGITSGYSPLGAMIASDRLFEPFLDGPTMFLHGYT 324 (460)
T ss_pred HHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEEecccccCCccceeEEEEcHHHHHHhhcCCCccccCCC
Confidence 99999999999999999999999999999999999999999999999999977999999999999877532 46789
Q ss_pred CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC---c---h----
Q 012138 324 FGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL---P---V---- 393 (470)
Q Consensus 324 ~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~---~---~---- 393 (470)
|++||++++++.++|+.++++++.+++++++++|++.|+++.. +| .+..+++.|+|+.+++..+.. . .
T Consensus 325 ~~gnp~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~-~~-~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~ 402 (460)
T PRK06541 325 FGGHPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKLLD-LP-IVGDVRGDGYFYGIELVKDKATKETFTDDESER 402 (460)
T ss_pred CCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhc-CC-CeEEEEecceEEEEEEecCcccccCCcchhhhh
Confidence 9999999999999999998888999999999999999999865 65 788999999999999854210 0 0
Q ss_pred -hHHHHHHHHHHcCceeccC--CCCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 394 -SAYDICLKMKERGILAKPT--HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 394 -~~~~~~~~l~~~Gv~~~~~--~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
....+.+.|+++||++.+. +.+.+||+||+.+|++||++++++|++++. ++
T Consensus 403 ~~~~~~~~~l~~~Gi~~~~~~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~-~~ 456 (460)
T PRK06541 403 LLRGFLSPALFEAGLYCRADDRGDPVVQLAPPLISGQEEFDEIEQILRSVLT-EA 456 (460)
T ss_pred hHHHHHHHHHHhCCeEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-HH
Confidence 1135778999999999764 457999999999999999999999999998 64
No 34
>PRK06148 hypothetical protein; Provisional
Probab=100.00 E-value=3.7e-63 Score=540.55 Aligned_cols=427 Identities=28% Similarity=0.409 Sum_probs=361.8
Q ss_pred cccccchhhhhHhhhcccCCCCCCCCCCC-CCCCCchHHHHHHHhhhcccCCC---CCceEEEeecCCEEEeCCCCeEEe
Q 012138 4 MGATRRNLHCLLSRVCRKRSYGAQPQGGT-SPSSSSSQQLINLEYEYSAHNYH---PVPIVFSQAKGSSIWDPEGNKYLD 79 (470)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~g~~~~d~~G~~~lD 79 (470)
.|++++.+.++|+.+||+|+.++..+... .+...+..++++.+.++..+.+. +.|+++++++|+|+||.||++|||
T Consensus 549 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~g~G~~l~D~dG~~ylD 628 (1013)
T PRK06148 549 PGVGEPDYLDVWAALFPDPAALLGLPDEAVAQSGRDKAEILRERKEHLLPNLSISYSDPIKFVRGWGVWLIDNRGRAYLD 628 (1013)
T ss_pred CCccCHhHHHHHhhhCCChHHHcCCChhhhccCCCCHHHHHHHHHHhcCcccccccCCCceEEEeeecEEEECCCCEEEE
Confidence 47889999999999999999998866532 12223455666776676665543 789999999999999999999999
Q ss_pred ccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHHHHHHhch
Q 012138 80 FLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGY 157 (470)
Q Consensus 80 ~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~~~~~~~~ 157 (470)
|.+++ .++||+||+|.+++.+|++++.... .+.++...+++++|++.++ .++++|+|||+||++.|+|+++.+
T Consensus 629 ~~~g~--~~lGH~hp~v~~Ai~~q~~~l~~~~-~~~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklAr~~-- 703 (1013)
T PRK06148 629 CFNNV--CHVGHAHPRVVAAAARQAARLNTNT-RYLHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLARAH-- 703 (1013)
T ss_pred cccCh--hhcCCCCHHHHHHHHHHHhhcCCcC-CcCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHh--
Confidence 99985 6799999999999999999874433 4677888999999999874 578999999999999999999986
Q ss_pred hcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCC-CCe--------eeecCC--C-------HHHHHHHHH
Q 012138 158 VKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLL-PGH--------LKVDFG--D-------ITALEKIFK 219 (470)
Q Consensus 158 ~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~~--d-------~~~Le~~l~ 219 (470)
.|+..||++.++|||++.+++++++. .++.++.+.. +++ ...||+ + .+++++.++
T Consensus 704 ------tGr~~ii~~~~~YHG~t~~a~s~s~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~ 776 (1013)
T PRK06148 704 ------TGQRDAIVLDHAYHGTTTELIDLSPY-KFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIA 776 (1013)
T ss_pred ------cCCCeEEEEcCCccCCCcchhhcCch-hhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHH
Confidence 36778999999999999999988763 2333343321 222 233454 2 145666664
Q ss_pred ---hcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCC-ccccccCCCCcceeeccccc
Q 012138 220 ---ESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLASDWEEVRPDMVILGKAL 295 (470)
Q Consensus 220 ---~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~-~~~~~~~~~~pdi~s~sK~l 295 (470)
..++++++||+||+++.+|.+.|+++|+++|+++|++||+++|+||||+||||+|. +|+++++++.||+++++|++
T Consensus 777 ~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~gK~l 856 (1013)
T PRK06148 777 AMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMGKPI 856 (1013)
T ss_pred hhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeeecccc
Confidence 23457999999999999999999999999999999999999999999999999997 78999999999999999999
Q ss_pred cCCCcceeEEEecHHHHhhcCcC-CccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEE
Q 012138 296 GGGVIPVSAVLADKEVMLCIQPG-EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKE 374 (470)
Q Consensus 296 ~gG~~~ig~v~~~~~~~~~~~~~-~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~ 374 (470)
+||+ |+|++++++++++.+.++ .+++||++||++|+++.++|+.++++++.+++++++++|+++|+++..++| .+.+
T Consensus 857 ggG~-Plgav~~~~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~-~i~~ 934 (1013)
T PRK06148 857 GNGH-PMGAVVTTREIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFD-IIGD 934 (1013)
T ss_pred cCCc-ceEEEEEcHHHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCC-CceE
Confidence 9997 999999999999998765 378999999999999999999999999999999999999999999998886 8899
Q ss_pred EeccceeEEEEeccCCC-----chhHHHHHHHHHHcCceeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 375 VRGRGLFNAVEFDKTAL-----PVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 375 ~~~~g~~~~~~~~~~~~-----~~~~~~~~~~l~~~Gv~~~~~~--~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
+++.|+|+++++..+.. ......+++.|+++||++.+.+ .+++||.||+++|+++|++++++|++++. ++
T Consensus 935 VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~~~vlr~~Ppl~it~~~id~~l~~l~~~l~-~~ 1011 (1013)
T PRK06148 935 VRGMGLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTEGPHDNVLKIRPPLIFSRADADHLLEVLDDVLA-AA 1011 (1013)
T ss_pred EeeeceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEeccCCCCCEEEEeCCccCCHHHHHHHHHHHHHHHH-HH
Confidence 99999999999964321 1235678899999999998754 58999999999999999999999999998 64
No 35
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=100.00 E-value=6.4e-63 Score=494.60 Aligned_cols=393 Identities=55% Similarity=0.949 Sum_probs=350.2
Q ss_pred chHHHHHHHhhhcccCCCCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCC
Q 012138 38 SSQQLINLEYEYSAHNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYND 117 (470)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~ 117 (470)
+++++++...++....+.+.|+++++++|+++||.||++||||.+++++.++||+||+|.+++.++++++.+.+..+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~l~d~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~ 82 (396)
T PRK04073 3 KSEKIIELTNHYGAHNYHPLPIVISEAEGVWVKDPEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSRAFHSD 82 (396)
T ss_pred hHHHHHHHHHHhcccccCCCCceEEeeeecEEEECCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccccccccCCH
Confidence 36688888888777777788999999999999999999999999999999999999999999999999887765556777
Q ss_pred cHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCC
Q 012138 118 KFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFG 197 (470)
Q Consensus 118 ~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~ 197 (470)
...+++++|+++.+.++++|++||++|++.|+++++.|++..+|.++++..||+++++|||++..++++++.+.++..+.
T Consensus 83 ~~~~l~~~l~~~~~~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~ 162 (396)
T PRK04073 83 QLGPWYEKVAKLTGKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFG 162 (396)
T ss_pred HHHHHHHHHHhcCCCCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCC
Confidence 88999999999988899999999999999999999987544334435667899999999999999999988777777788
Q ss_pred CCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcc
Q 012138 198 PLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML 277 (470)
Q Consensus 198 ~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~ 277 (470)
+..+++..++|+|++++++++++ ++++|++||++||+|.+.|+++|+++|+++|++||++||+||+|+|||++|..+
T Consensus 163 ~~~~~~~~~~~~d~~~l~~~i~~---~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~ 239 (396)
T PRK04073 163 PMLPGIKKIPYGDLEALKAAITP---NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLF 239 (396)
T ss_pred CCCCCceEeCCCCHHHHHHhccc---CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHH
Confidence 88788889999999999998865 789999999999999999888999999999999999999999999999999888
Q ss_pred ccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q 012138 278 ASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEEL 357 (470)
Q Consensus 278 ~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l 357 (470)
+++..++.||+++|||++++|.+|+|++++++++++.+....+.+||++++++++++.++|+.++++++.++.+++++++
T Consensus 240 ~~~~~~~~pdi~~~sK~lg~gg~~ig~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~l~~~~~~~~~~l 319 (396)
T PRK04073 240 ACDWDNVTPDMYILGKALGGGVFPISCVAANRDILGVFTPGSHGSTFGGNPLACAVSIAALEVLEEEKLPERSLELGEYF 319 (396)
T ss_pred HhhhcCCCCCEEEecccccCCCCcceEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 77888999999999999997633999999999999999877788899999999999999999988788999999999999
Q ss_pred HHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHH
Q 012138 358 RQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKAL 437 (470)
Q Consensus 358 ~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l 437 (470)
.+.|+++. ++ .+..+++.|.|+.+++.. ++.+++++|+++||++.+.+++++||+||+.+|+|++++++++|
T Consensus 320 ~~~L~~l~--~~-~i~~~~~~g~~~~~~~~~-----~~~~~~~~l~~~Gv~~~~~~~~~iRi~p~l~~t~e~i~~~~~~l 391 (396)
T PRK04073 320 KEQLKEID--NP-MIKEVRGRGLFIGVELNE-----PARPYCEALKEEGLLCKETHETVIRFAPPLVITKEELDWAFEKI 391 (396)
T ss_pred HHHHHhhc--CC-cccceecceEEEEEEecc-----hHHHHHHHHHHCCeEEecCCCCEEEEECCcccCHHHHHHHHHHH
Confidence 99998873 22 567788999998887753 46789999999999998876789999999999999999999999
Q ss_pred HHHH
Q 012138 438 HDVL 441 (470)
Q Consensus 438 ~~~l 441 (470)
++++
T Consensus 392 ~~~l 395 (396)
T PRK04073 392 KAVL 395 (396)
T ss_pred HHHh
Confidence 9876
No 36
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=100.00 E-value=3e-63 Score=495.92 Aligned_cols=376 Identities=29% Similarity=0.459 Sum_probs=330.1
Q ss_pred ceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCC-CCCCCcHHHHHHHHhhhhC--CCe
Q 012138 58 PIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMFG--YDM 134 (470)
Q Consensus 58 p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~--~~~ 134 (470)
|+++++++|+++||.|||+||||.+++++.++||+||+|.+++.+|++++.+... .+.++...+++++|++..+ .++
T Consensus 26 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~ 105 (428)
T PRK07986 26 VYPVVSAEGCELILADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHPPAIELCRKLVAMTPQPLEC 105 (428)
T ss_pred CeeEEeeeeeEEEeCCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCccccccCCHHHHHHHHHHHhhCCCCcCE
Confidence 3789999999999999999999999999999999999999999999998765443 3467888999999999874 579
Q ss_pred EEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCC-cccccCCCCCCCCeeeec------
Q 012138 135 VLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVD------ 207 (470)
Q Consensus 135 v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------ 207 (470)
++|++||+||++.|+|+++.|+.. ++ +++.+||++.++|||.+.+++++++. ..++..|.+..+++..++
T Consensus 106 v~f~~SGsEAve~AlklAr~~~~~-~g--~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 182 (428)
T PRK07986 106 VFLADSGSVAVEVAMKMALQYWQA-KG--EPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRF 182 (428)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHh-cC--CCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCccc
Confidence 999999999999999999986321 11 35678999999999999999988763 334455666666544443
Q ss_pred -----CCCHHHHHHHHHhcCCCeEEEEEccc-cCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcccccc
Q 012138 208 -----FGDITALEKIFKESGDQIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDW 281 (470)
Q Consensus 208 -----~~d~~~Le~~l~~~~~~~~~vi~epi-~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~ 281 (470)
++|++++++.++..++++++|++||+ ++.+|.+.|+++|+++|+++|++||++||+||||+||||+|++|++++
T Consensus 183 ~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~ 262 (428)
T PRK07986 183 DGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEH 262 (428)
T ss_pred chhhHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecc
Confidence 35778899999766668999999996 899999898999999999999999999999999999999999999999
Q ss_pred CCCCcceeeccccccCCCcceeEEEecHHHHhhcCcC-----CccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 012138 282 EEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG-----EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEE 356 (470)
Q Consensus 282 ~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~-----~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~ 356 (470)
+++.||++++||+++||++|+|++++++++++.+... .+++||++||++|+++.++|+.++++++.+++++++++
T Consensus 263 ~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~~~~~~~~~~g~~ 342 (428)
T PRK07986 263 AGIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESGDWQQQVAAIEAQ 342 (428)
T ss_pred cCCCCCEEEechhhhCCcccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 9999999999999999966999999999999988653 37899999999999999999999998999999999999
Q ss_pred HHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHH
Q 012138 357 LRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKA 436 (470)
Q Consensus 357 l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~ 436 (470)
|++.|+++.. +| .+.++++.|+++.+++..+. ....+.+.|+++||++.+.+ +.+||+||+++|++||++++++
T Consensus 343 l~~~l~~l~~-~~-~i~~vRg~Gl~~~ve~~~~~---~~~~~~~~l~~~Gl~~~~~g-~~i~~~Ppl~it~~ei~~~~~~ 416 (428)
T PRK07986 343 LREELAPLRD-AP-MVADVRVLGAIGVVETTRPV---NMAALQRFFVEQGVWIRPFG-KLIYLMPPYIILPEQLQRLTAA 416 (428)
T ss_pred HHHHHHHHhc-CC-CEEeEeccceEEEEEeCCcc---cHHHHHHHHHHCCcEEEecC-CEEEEeCCCCCCHHHHHHHHHH
Confidence 9999999864 65 78899999999999987543 46789999999999998764 7999999999999999999999
Q ss_pred HHHHHh
Q 012138 437 LHDVLE 442 (470)
Q Consensus 437 l~~~l~ 442 (470)
|.++++
T Consensus 417 l~~~l~ 422 (428)
T PRK07986 417 VNRAVQ 422 (428)
T ss_pred HHHHHh
Confidence 999997
No 37
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-62 Score=496.72 Aligned_cols=395 Identities=31% Similarity=0.527 Sum_probs=337.9
Q ss_pred CchHHHHHHHhhhcccCC-C-CCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCC
Q 012138 37 SSSQQLINLEYEYSAHNY-H-PVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAF 114 (470)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~-~-~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~ 114 (470)
++++++.+.+.++.++.+ . +.|+++++++|+++||.||++||||.++ ++.++||+||+|.+++.+|++++.+.+..+
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~g~-~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~ 110 (459)
T PRK06082 32 ERTQALLKRDSEVFLHQAMSTPCLDVLASAEGIYIEDVDGKKYMDFHGN-NVHQLGYGHPHVIEKVKEQMAKLPFSPRRF 110 (459)
T ss_pred cchHHHHHHHHHHhcccccCCCCCceEEeeeeeEEEECCCCEEEEcccH-hhcccCCCCHHHHHHHHHHHHhCCCccCcc
Confidence 345666665555444432 2 4589999999999999999999999854 788999999999999999999887655456
Q ss_pred CCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCccc
Q 012138 115 YNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEA 192 (470)
Q Consensus 115 ~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~ 192 (470)
.++...+++++|+++.+ .++++|++||+||++.|+++++.+ .++..||++.++|||++.+++++++.+.+
T Consensus 111 ~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~--------tgr~~ii~~~~~yHG~t~~a~s~~~~~~~ 182 (459)
T PRK06082 111 TNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHI--------TGNFKVVSLWDSFHGASLDAISVGGEACF 182 (459)
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHHHHHHHh--------cCCCEEEEEeCCCcCccHHHHhhcCCccc
Confidence 78889999999999884 479999999999999999999986 35678999999999999999999887777
Q ss_pred ccCCCCCCCCeeeec--------CCC--------HHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHh
Q 012138 193 IRGFGPLLPGHLKVD--------FGD--------ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK 256 (470)
Q Consensus 193 ~~~~~~~~~~~~~~~--------~~d--------~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~ 256 (470)
+..|.+..+++..+| +++ +++|++++++. +++++||+||+++.+ .+.|+++|+++|+++|++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~-~~vAavIvEPv~g~g-~~~~~~~yl~~lr~lc~~ 260 (459)
T PRK06082 183 RQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKE-GGIGAFIAEAVRNTD-VQVPSKAYWKRVREICDK 260 (459)
T ss_pred ccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcC-CCEEEEEECCccCCC-CcCCCHHHHHHHHHHHHH
Confidence 777777777665554 333 35578888643 479999999999984 666699999999999999
Q ss_pred cCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcC-CccCCCCCCHHHHHHHH
Q 012138 257 YNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG-EHGSTFGGNPLASAVAI 335 (470)
Q Consensus 257 ~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~-~~~~t~~~~~~~~aaa~ 335 (470)
||++||+||||+||||+|++|+++++|+.||++++||+++||++|+|++++++++++.+... .+ +||++||++|+++.
T Consensus 261 ~g~llI~DEV~tG~GRtG~~fa~e~~gv~PDiv~~gKgl~gG~~P~~av~~~~~i~~~~~~~~~~-~T~~gnpl~~aaa~ 339 (459)
T PRK06082 261 HNVLLIIDEIPNGMGRTGEWFTHQAYGIEPDILCIGKGLGGGLVPIAAMITKDKYNTAAQISLGH-YTHEKSPLGCAAAL 339 (459)
T ss_pred cCCEEEEechhhCCCccchhhHhHhhCCCCCEEEecccccCCCCcceEEEEcHHHHhhccCCCCC-CCCCcCHHHHHHHH
Confidence 99999999999999999999999999999999999999999966999999999988655322 34 79999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC-----chhHHHHHHHHHHcCceec
Q 012138 336 ASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-----PVSAYDICLKMKERGILAK 410 (470)
Q Consensus 336 a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~-----~~~~~~~~~~l~~~Gv~~~ 410 (470)
++|+.++++++.+++++++++|++.|+++..++| .+.++++.|+|+++++..+.. ......+...|+++||++.
T Consensus 340 a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~ 418 (459)
T PRK06082 340 ATIEVIEQEGLLEKVKADSQFMRERLLEMKAKYP-LIGDVRGIGLLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFK 418 (459)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCC-CeeeeeeccceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEE
Confidence 9999999889999999999999999999988886 889999999999999964321 1125578888999999998
Q ss_pred cCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 411 PTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 411 ~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
+.+.+.+||+||+++|++||+++++++++++. ++
T Consensus 419 ~~~~~~i~~~Ppl~it~~eid~~~~~l~~~l~-~~ 452 (459)
T PRK06082 419 VSQGNVIQLSPPLIITREELTQALAILEEAIA-KI 452 (459)
T ss_pred ecCCCEEEEeCCCccCHHHHHHHHHHHHHHHH-HH
Confidence 87779999999999999999999999999998 76
No 38
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=8.3e-63 Score=492.99 Aligned_cols=376 Identities=26% Similarity=0.419 Sum_probs=325.5
Q ss_pred CCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCC-CCCCCcHHHHHHHHhhhhC--C
Q 012138 56 PVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMFG--Y 132 (470)
Q Consensus 56 ~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~--~ 132 (470)
+.|+++++++|+|+||.||++||||.+++++.++||+||+|.+++.+|++++.+... .+.++...+++++|++..+ .
T Consensus 21 ~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 100 (422)
T PRK05630 21 VRNRLVTSTDGVFLTLEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLNLTDNGL 100 (422)
T ss_pred CCCeeEEeceeeEEEECCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHhhCCCCc
Confidence 358999999999999999999999999999999999999999999999998776543 3567788999999999873 6
Q ss_pred CeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCC-cccccCCCCCCCCeeeecCC--
Q 012138 133 DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFG-- 209 (470)
Q Consensus 133 ~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-- 209 (470)
++++|++||+||++.|+|+++.|+... +. +++.+|+++.++|||++.+++++++. ..++..|.+..++...+|++
T Consensus 101 ~~v~f~~SGseA~e~AlklAr~~~~~~-g~-~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~ 178 (422)
T PRK05630 101 DHVFYSDSGSVSVEVAIKMALQYSKGQ-GH-PERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPV 178 (422)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhc-CC-CCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcc
Confidence 899999999999999999999864322 21 35678999999999999999988764 33455566655554444432
Q ss_pred ------C----HHHHHHHHHhcCCCeEEEEEccc-cCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccc
Q 012138 210 ------D----ITALEKIFKESGDQIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA 278 (470)
Q Consensus 210 ------d----~~~Le~~l~~~~~~~~~vi~epi-~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~ 278 (470)
+ .+.+++++.+ ++++||+||+ ++.+|.+.|+++|+++|+++|++||++||+||||+||||+|++|+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~---~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a 255 (422)
T PRK05630 179 RGSSPQEISEYLRSLELLIDE---TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFA 255 (422)
T ss_pred cCCChHHHHHHHHHHHHHHhh---ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhH
Confidence 1 2345555553 8999999996 999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCc------CCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHH
Q 012138 279 SDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAH 352 (470)
Q Consensus 279 ~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~------~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~ 352 (470)
++++++.||+++++|+++||++|+|++++++++++.+.. ..|++||++||++|+++.++|+.++++++.+++++
T Consensus 256 ~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~~~~~~~~ 335 (422)
T PRK05630 256 TLAAGVTPDIMCVGKALTGGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGMWRKQVKR 335 (422)
T ss_pred HHhcCCCCCeeeeechhhcCccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 999999999999999999997699999999999988753 25789999999999999999999998889999999
Q ss_pred HHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHH
Q 012138 353 LGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQE 432 (470)
Q Consensus 353 ~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~ 432 (470)
++++|++.|+.+.. +| .+.++++.|+++.+++..+. .+..+.+.|+++||++.+.+ +++||.||+++|++||++
T Consensus 336 ~g~~l~~~L~~l~~-~~-~v~~vRg~Gl~~~ie~~~~~---~~~~~~~~~~~~Gl~~~~~g-~~l~~~PpL~it~~~i~~ 409 (422)
T PRK05630 336 IEAELIAGLSPLAH-LP-GVADVRVLGAIGVVEMEQPV---DMEEATQAAVDHGVWLRPFG-RLVYVMPPYITTSEQIAQ 409 (422)
T ss_pred HHHHHHHHHHHhhc-CC-CeeeeeccccEEEEEECCcc---cHHHHHHHHHHCCeEEEecC-CEEEEECCccCCHHHHHH
Confidence 99999999988754 55 78899999999999996543 46688999999999998764 899999999999999999
Q ss_pred HHHHHHHHHh
Q 012138 433 GSKALHDVLE 442 (470)
Q Consensus 433 ~~~~l~~~l~ 442 (470)
++++|+++++
T Consensus 410 ~~~~l~~al~ 419 (422)
T PRK05630 410 ICAALAAAVK 419 (422)
T ss_pred HHHHHHHHHh
Confidence 9999999997
No 39
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=1e-62 Score=489.69 Aligned_cols=377 Identities=35% Similarity=0.622 Sum_probs=334.2
Q ss_pred CCCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCC
Q 012138 54 YHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYD 133 (470)
Q Consensus 54 ~~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 133 (470)
+.+.|+++++++|+++||.||++||||.+++++.++||+||+|.+++.++++++.+.+..+++++..+++++|.+..+.+
T Consensus 15 ~~~~~~~~~~~~G~~~~d~dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~la~~l~~~~~~~ 94 (395)
T PRK03715 15 TNRPDIVFTHGKGSWLYDHNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSPAFYNEPMAKLAGLLTQHSCFD 94 (395)
T ss_pred cCCCCceEEeeecCEEEECCCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHhhccCCC
Confidence 44568899999999999999999999999999999999999999999999998766555566788889999998877788
Q ss_pred eEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHH
Q 012138 134 MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITA 213 (470)
Q Consensus 134 ~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 213 (470)
+++|++||+||++.|+++++.++. ++ .+++..||+++++|||++.+++++++.+.++..+.|..+++...+++|+++
T Consensus 95 ~v~f~~SGseA~e~Aik~ar~~~~--~~-~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~ 171 (395)
T PRK03715 95 KVFFANSGAEANEGAIKLARKWGR--KH-KNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIAS 171 (395)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHhh--cc-CCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHH
Confidence 999999999999999999997632 11 135678999999999999999999987777777777777777778899999
Q ss_pred HHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccc
Q 012138 214 LEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGK 293 (470)
Q Consensus 214 Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK 293 (470)
+++++.+ ++++|++||+++++|.+.|+++|+++|+++|++||+++|+||+|+||||+|++|+++++++.||++++||
T Consensus 172 l~~~l~~---~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t~gK 248 (395)
T PRK03715 172 VEKLITD---KTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMTLGK 248 (395)
T ss_pred HHHHcCC---CceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCceeeehh
Confidence 9999864 7999999999999999998999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceE
Q 012138 294 ALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVK 373 (470)
Q Consensus 294 ~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~ 373 (470)
+++||+ |+|++++++++.. +....+++||+++|++++++.++|+.++++++.+++++++++|+++|+++..+++ +.
T Consensus 249 ~lg~G~-p~~av~~~~~i~~-~~~~~~~~T~~g~pl~~aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~--i~ 324 (395)
T PRK03715 249 GIGGGV-PLAALLAKAEVAV-FEAGDQGGTYNGNPLMTAVGVAVISQLLAPGFLEGVRARGEYLKEKLLELSEERG--LE 324 (395)
T ss_pred hhhCCc-ceEEEEEcccccc-ccCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcCC--cC
Confidence 999997 9999999999863 4445678999999999999999999999889999999999999999999887764 66
Q ss_pred EEeccceeEEEEeccCCCchhHHHHHHHHHHc---CceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 374 EVRGRGLFNAVEFDKTALPVSAYDICLKMKER---GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 374 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~---Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
.+++.|+|+.+++..+ ....+.+.+++. ||++.+...+.+||+||+.+|++||++++++|+++++ ++
T Consensus 325 ~vrG~Glm~~i~l~~~----~~~~~~~~~~~~~~~Gi~~~~~~~~~lR~~p~l~~t~~ei~~~~~~l~~~l~-~~ 394 (395)
T PRK03715 325 GERGEGLLRALLLGKD----IGPQIVEKARDMQPDGLLLNAPRPNLLRFMPALNVTTEEIDQMIAMLRSVLD-KL 394 (395)
T ss_pred eEEcceeEEEEEecCc----hHHHHHHHHHhccCCCEEEeecCCCEEEEeCCcccCHHHHHHHHHHHHHHHH-hh
Confidence 7899999999998643 244566666666 9999766678999999999999999999999999998 64
No 40
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=100.00 E-value=2.1e-62 Score=492.95 Aligned_cols=385 Identities=32% Similarity=0.507 Sum_probs=333.7
Q ss_pred CCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCC-CCCCCcHHHHHHHHhhhh--C
Q 012138 55 HPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMF--G 131 (470)
Q Consensus 55 ~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~--~ 131 (470)
.+.|+++++++|+|+||.||++||||.+++++.++||+||+|.+++.+|++++.+.+. .+.++...+++++|++.. +
T Consensus 26 ~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~ 105 (442)
T PRK13360 26 KKAPRLLVAAKGMYYTTHDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAFQMGHPKAFELANRIAEIAPGG 105 (442)
T ss_pred cCCCceEEeeeeeEEEeCCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHHhCCCC
Confidence 3468999999999999999999999999999999999999999999999998765543 356788899999999987 3
Q ss_pred CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCC-
Q 012138 132 YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD- 210 (470)
Q Consensus 132 ~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d- 210 (470)
.++++|++||+||++.|+|+++.|+.. ++ .+++..||++.++|||++.+++++++.+..+..|.+..+++..+|++.
T Consensus 106 ~~~v~f~~sGseA~e~AlklAr~~~~~-~g-~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~ 183 (442)
T PRK13360 106 LNHVFFTNSGSESVDTALKIALAYHRA-RG-EGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLD 183 (442)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHh-cC-CCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCch
Confidence 689999999999999999999986321 11 134668999999999999999999988777777777766665555541
Q ss_pred -----------------HHHHHHHHHhc-CCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcc
Q 012138 211 -----------------ITALEKIFKES-GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR 272 (470)
Q Consensus 211 -----------------~~~Le~~l~~~-~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~ 272 (470)
+++||+++... ++++++||+||+++++|.+.|+++|+++|+++|++||++||+||||+||||
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~Gr 263 (442)
T PRK13360 184 LARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGR 263 (442)
T ss_pred hhccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCC
Confidence 46788888754 357999999999999999999999999999999999999999999999999
Q ss_pred cCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcC-------CccCCCCCCHHHHHHHHHHHHHHhhhh
Q 012138 273 SGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG-------EHGSTFGGNPLASAVAIASLDVIRDEK 345 (470)
Q Consensus 273 ~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~-------~~~~t~~~~~~~~aaa~a~l~~~~~~~ 345 (470)
+|++|+++++++.||+++|||+++||++|+|++++++++++.+... .+++||++||++|+++.++|+.+++++
T Consensus 264 tG~~~a~~~~gv~PDivt~gK~l~gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~~ 343 (442)
T PRK13360 264 LGAPFAAQYFGVTPDLLTCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYEREG 343 (442)
T ss_pred CccchhhhhcCCCCceeeeeeccccCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999966999999999999877532 377899999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC--chhHHHHHHHHHHcCceeccCCCCEEEEecCC
Q 012138 346 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL--PVSAYDICLKMKERGILAKPTHDTIVRLTPPL 423 (470)
Q Consensus 346 ~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~ 423 (470)
+.++++++++++++.|+++.. +| .+.++++.|++..+++..... ...+.++.+.|+++||++.+. ++.+||+||+
T Consensus 344 l~~~~~~~g~~l~~~l~~l~~-~~-~v~~vrG~Gl~~~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~-~~~lr~~Ppl 420 (442)
T PRK13360 344 LLTRAARLAPYWEDALHSLRD-AP-HVIDIRNLGLVGAVELAPRDGKPGKRAYEVFLKCFEKGLMIRYT-GDILALSPPL 420 (442)
T ss_pred HHHHHHHHHHHHHHHHHHhhc-CC-CeeeeeccceEEEEEEecCCCCcchhHHHHHHHHHHCCcEEEec-CCEEEEeCCC
Confidence 999999999999999998854 54 678999999999988854211 123567888999999999776 4689999999
Q ss_pred CCCHHHHHHHHHHHHHHHhccc
Q 012138 424 SISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 424 ~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
.+|++||++++++|+++++ ++
T Consensus 421 ~~t~~eid~~~~~l~~~l~-~~ 441 (442)
T PRK13360 421 IIEEAQIDELFDILAQALK-ET 441 (442)
T ss_pred ccCHHHHHHHHHHHHHHHH-Hh
Confidence 9999999999999999997 54
No 41
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=100.00 E-value=2.6e-62 Score=490.86 Aligned_cols=386 Identities=32% Similarity=0.533 Sum_probs=344.1
Q ss_pred CCCCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCC
Q 012138 53 NYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGY 132 (470)
Q Consensus 53 ~~~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 132 (470)
.+.+.|+++++++|+|+||.||++||||.+++++.++||+||+|.+++.++++++.+....+.++...+++++|+++.+.
T Consensus 17 ~~~~~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~ 96 (406)
T PRK12381 17 VYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFA 96 (406)
T ss_pred hcCCCCceEEEeecCEEEeCCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccccCccCCHHHHHHHHHHHhhCCC
Confidence 34567899999999999999999999999999999999999999999999998865544445677789999999998888
Q ss_pred CeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHH
Q 012138 133 DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDIT 212 (470)
Q Consensus 133 ~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 212 (470)
++++|++||+||++.|+++++.++... +. +++..|+.++++|||++.+++++++.+.++..|.+..+++..++|+|++
T Consensus 97 ~~v~~~~sGseA~e~Alk~ar~~~~~~-~~-~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 174 (406)
T PRK12381 97 DRVFFCNSGAEANEAALKLARKYAHDR-YG-SHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLN 174 (406)
T ss_pred CeEEEcCCcHHHHHHHHHHHHHHHhhc-CC-CCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHH
Confidence 999999999999999999999864321 11 3566899999999999999999998877777788887888889999999
Q ss_pred HHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecc
Q 012138 213 ALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG 292 (470)
Q Consensus 213 ~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~s 292 (470)
++++.+++ ++++|++||+++.+|.+.|+++|+++|+++|++||++||+||+|+|||++|.+++++++++.||+++||
T Consensus 175 ~l~~~l~~---~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pDi~t~s 251 (406)
T PRK12381 175 SASALIDD---QTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVLTTA 251 (406)
T ss_pred HHHHhccC---CeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCCEEEeh
Confidence 99999975 799999999998899888899999999999999999999999999999999988888899999999999
Q ss_pred ccccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCce
Q 012138 293 KALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYV 372 (470)
Q Consensus 293 K~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~ 372 (470)
|+++||+ |+|++++++++++.+....+++||+++|++++++.++|+.++++++.++++++++++.+.|+++..+++ .+
T Consensus 252 K~l~gG~-~ig~~~~~~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~-~~ 329 (406)
T PRK12381 252 KALGGGF-PIGAMLTTEKCASVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINARYG-LF 329 (406)
T ss_pred hhhhCCC-ceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCC-CE
Confidence 9999997 999999999999999877788999999999999999999998888999999999999999999877665 67
Q ss_pred EEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccCC
Q 012138 373 KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 447 (470)
Q Consensus 373 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~ 447 (470)
..+++.|++++++++... ......+.+.|+++||++.+.+++++||+||+.+|+++|++++++|+++++ ++..
T Consensus 330 ~~vrg~Gl~~~~~l~~~~-~~~~~~~~~~l~~~Gv~v~~~g~~~lRl~p~~~~t~~~i~~~~~~l~~~l~-~~~~ 402 (406)
T PRK12381 330 SEIRGLGLLIGCVLNAEY-AGKAKQISQEAAKAGVMVLIAGPNVVRFAPALNISEEEITTGLDRFARACE-RFVS 402 (406)
T ss_pred EEEecCeEEEEEEecCch-hhHHHHHHHHHHHCCcEEeeCCCCEEEEeCCccCCHHHHHHHHHHHHHHHH-HHHh
Confidence 888999999999886421 114678899999999999877678999999999999999999999999998 7643
No 42
>PRK06149 hypothetical protein; Provisional
Probab=100.00 E-value=2.5e-62 Score=534.36 Aligned_cols=424 Identities=27% Similarity=0.421 Sum_probs=357.7
Q ss_pred cccccchhhhhHhhhcccCCCCCCCCCCCCCCCCchHHHHHHHhhhcccC---CCCCceEEEeecCCEEEeCCCCeEEec
Q 012138 4 MGATRRNLHCLLSRVCRKRSYGAQPQGGTSPSSSSSQQLINLEYEYSAHN---YHPVPIVFSQAKGSSIWDPEGNKYLDF 80 (470)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~g~~~~d~~G~~~lD~ 80 (470)
-|++++.+.+.|+.+||+|++++..++.. +..++.+++++.++++... +.+.|+++++++|+|+||.+|++||||
T Consensus 513 pgv~~~~~~~~w~~~cpdP~~ll~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~p~~i~~g~G~~l~D~dG~~ylD~ 590 (972)
T PRK06149 513 PLFARPSQAAAWLALCPSPAPLLGLPCDA--PPPDAAALLARRDASFARVQKHYYADPPQIERGWRHHLFDMAGRSYLDM 590 (972)
T ss_pred CCccCHHHHHHHHHhCcChHHHcCCCccc--CCCCHHHHHHHHHHhhccchhhcccCCCeEEEeeeeEEEeCCCCEEEEC
Confidence 37889999999999999999999998744 2367888998888877653 345688999999999999999999999
Q ss_pred cCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhh--CCCeEEecCChhHHHHHHHHHHHHhchh
Q 012138 81 LSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYV 158 (470)
Q Consensus 81 ~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~v~~~~sGteA~~~al~~~~~~~~~ 158 (470)
.+++ .++||+||+|.+++.+|++++.+.+ .+.++...+++++|++.+ +.++++|+|||+||++.|+|+++.+
T Consensus 591 ~~~~--~~lGh~hp~v~~Ai~~q~~~l~~~~-~~~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~--- 664 (972)
T PRK06149 591 VNNV--TVLGHGHPRLAAAAARQWSLLNTNS-RFHYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRLAWAA--- 664 (972)
T ss_pred CCCc--cccCCCCHHHHHHHHHHHHhccccc-cccCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHh---
Confidence 9886 3799999999999999999876543 356778899999999988 4689999999999999999999986
Q ss_pred cccCCCCCcEEEEEccCccccccchhcccCCcccccCC-CCCC--------CCeeeecCC--C-----HHHHHHHHH---
Q 012138 159 KKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGF-GPLL--------PGHLKVDFG--D-----ITALEKIFK--- 219 (470)
Q Consensus 159 ~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~--d-----~~~Le~~l~--- 219 (470)
.|+..||+++++|||++.++.++++.......+ .+.. ++....+++ + .+++++.++
T Consensus 665 -----tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 739 (972)
T PRK06149 665 -----SGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELD 739 (972)
T ss_pred -----cCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHh
Confidence 366789999999999999887765431111111 1111 122222232 2 345555553
Q ss_pred hcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCC-ccccccCCCCcceeeccccccCC
Q 012138 220 ESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLASDWEEVRPDMVILGKALGGG 298 (470)
Q Consensus 220 ~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~-~~~~~~~~~~pdi~s~sK~l~gG 298 (470)
..++++++||+||+++.+|.+.|+++|+++|+++|++||+++|+||||+||||+|+ +|+++++|+.||++++||+++||
T Consensus 740 ~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt~gK~lg~G 819 (972)
T PRK06149 740 ASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIITMAKGMGNG 819 (972)
T ss_pred hcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEEEecccccCC
Confidence 23468999999999999999999999999999999999999999999999999997 57899999999999999999999
Q ss_pred CcceeEEEecHHHHhhcCc-CCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Q 012138 299 VIPVSAVLADKEVMLCIQP-GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG 377 (470)
Q Consensus 299 ~~~ig~v~~~~~~~~~~~~-~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~ 377 (470)
+ |+|++++++++++.+.. ..+.+|+++||++|+++.++|+.++++++.+++++++++|+++|+++..++| .+..++|
T Consensus 820 ~-Pl~av~~~~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~-~i~~vrG 897 (972)
T PRK06149 820 H-PLGAVITRREIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLREEKLQENARRVGDHLKARLEALADRHP-LIGAVHG 897 (972)
T ss_pred e-eeEEEEEcHHHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEee
Confidence 7 99999999999998864 3456788999999999999999999999999999999999999999988886 8999999
Q ss_pred cceeEEEEeccCCC-----chhHHHHHHHHHHcCceeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 378 RGLFNAVEFDKTAL-----PVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 378 ~g~~~~~~~~~~~~-----~~~~~~~~~~l~~~Gv~~~~~~--~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
.|+|+++++..+.. ......+++.|+++||++.+.+ .+++||.||+++|++++++++++|++++.
T Consensus 898 ~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~g~~~~vl~~~Ppl~it~~~id~~~~~l~~~l~ 969 (972)
T PRK06149 898 MGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPTGDHLNILKIKPPLCLDRESADFFVDMLDRVLT 969 (972)
T ss_pred cceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeecCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHH
Confidence 99999999853210 1235678999999999998765 38999999999999999999999999997
No 43
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=100.00 E-value=2.3e-62 Score=493.01 Aligned_cols=386 Identities=31% Similarity=0.499 Sum_probs=334.8
Q ss_pred CCCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCC-CCCCCcHHHHHHHHhhhhC-
Q 012138 54 YHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMFG- 131 (470)
Q Consensus 54 ~~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~- 131 (470)
+.+.|+++++++|+|+||.||++||||.+++++.++||+||+|.+++.++++++.+.+. .+.++...+++++|++..+
T Consensus 28 ~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~L~~~~p~ 107 (445)
T PRK09221 28 FKAAPRLLVSAEGMYYTDADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAFQMGHPLAFELAERLAELAPG 107 (445)
T ss_pred cCCCCceEEeccccEEEeCCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCC
Confidence 33568999999999999999999999999999999999999999999999998766544 3567788899999999873
Q ss_pred -CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCC
Q 012138 132 -YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD 210 (470)
Q Consensus 132 -~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (470)
.++|+|++||+||++.|+|+++.|+... + .+++.+||.+.++|||++.+++++++.+..+..|.+..+++..+|+++
T Consensus 108 ~~~~v~f~~sGseAve~AlklAr~~~~~~-g-~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (445)
T PRK09221 108 GLDHVFFTNSGSESVDTALKIALAYHRAR-G-QGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTL 185 (445)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHHHhc-C-CCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCc
Confidence 6899999999999999999999864321 1 134668999999999999999999987777777777766665555432
Q ss_pred ------------------HHHHHHHHHhcC-CCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCc
Q 012138 211 ------------------ITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 271 (470)
Q Consensus 211 ------------------~~~Le~~l~~~~-~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g 271 (470)
.++++++++..+ +++++||+||+++.+|.+.|+++|+++|+++|++||++||+||||+|||
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~G 265 (445)
T PRK09221 186 DLPENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFG 265 (445)
T ss_pred cccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCC
Confidence 367888887553 6899999999999999999999999999999999999999999999999
Q ss_pred ccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCc-------CCccCCCCCCHHHHHHHHHHHHHHhhh
Q 012138 272 RSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP-------GEHGSTFGGNPLASAVAIASLDVIRDE 344 (470)
Q Consensus 272 ~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~-------~~~~~t~~~~~~~~aaa~a~l~~~~~~ 344 (470)
|+|.+|+++++++.||++++||+++||++|+|++++++++++.+.. ..+++||++||++++++.++|+.++++
T Consensus 266 RtG~~~~~~~~gv~PDi~~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~ 345 (445)
T PRK09221 266 RLGAAFAAERFGVTPDIITFAKGLTNGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREE 345 (445)
T ss_pred cCchhhHHHhcCCCCCEEEeccccccCcccceeeEEcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999996699999999999988743 246789999999999999999999988
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC--chhHHHHHHHHHHcCceeccCCCCEEEEecC
Q 012138 345 KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL--PVSAYDICLKMKERGILAKPTHDTIVRLTPP 422 (470)
Q Consensus 345 ~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~ 422 (470)
++.++++++++++++.|+++. .+| .+.++++.|++..+++..... ...+..+.+.|+++||++.+. ++.+||+||
T Consensus 346 ~l~~~~~~~g~~l~~~l~~l~-~~~-~v~~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~-~~~lr~~Pp 422 (445)
T PRK09221 346 DLFERAAELAPYFEDAVHSLK-GLP-HVIDIRNIGLVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRYT-GDTIALSPP 422 (445)
T ss_pred cHHHHHHHHHHHHHHHHHhhc-cCC-CEEEEecCceEEEEEEecccccccchHHHHHHHHHHCCeEEeec-CCEEEEECC
Confidence 999999999999999999884 354 688999999999998864211 123567889999999999765 578999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhccc
Q 012138 423 LSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 423 ~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
+.+|++||++++++|++++. ++
T Consensus 423 l~~t~~eid~~~~~l~~~l~-~~ 444 (445)
T PRK09221 423 LIIEKAQIDELVDALGDALR-AV 444 (445)
T ss_pred ccCCHHHHHHHHHHHHHHHH-hh
Confidence 99999999999999999998 64
No 44
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=5e-62 Score=490.33 Aligned_cols=398 Identities=30% Similarity=0.519 Sum_probs=344.2
Q ss_pred chHHHHHHHhhhcccCCC--CCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCC-C
Q 012138 38 SSQQLINLEYEYSAHNYH--PVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRA-F 114 (470)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~--~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~-~ 114 (470)
++.++++.+++|..+.+. ..|+++++++|+|+||.||++||||.+++++.++||+||+|.+++.+|++++.+.... +
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~ 81 (443)
T PRK08360 2 KPLEIIERYSKVISPANRVTYYPLVPVKAENAKVWDIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPIYG 81 (443)
T ss_pred CHHHHHHHHHHhcccccccccCCceEEecceeEEEECCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCcccccc
Confidence 356778888888776653 5699999999999999999999999999999999999999999999999987665443 3
Q ss_pred CCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCc-c
Q 012138 115 YNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDN-E 191 (470)
Q Consensus 115 ~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~-~ 191 (470)
.++...+++++|++..+ .++++|++||+||++.|+|+++.+ .++..|+.+.++|||++.+++++++.. .
T Consensus 82 ~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~--------tgr~~ii~~~~~yHG~t~~a~s~~~~~~~ 153 (443)
T PRK08360 82 FPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFARAY--------TKRRKILSYLRSYYGSTYGAMSLTGLDFP 153 (443)
T ss_pred CcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHHHHHHHh--------cCCCeEEEEeCCcCCcCHHHHHhcCCCcc
Confidence 46778999999999874 478999999999999999999986 367799999999999999998887642 3
Q ss_pred cccCCCCCCCCeeeecCCC-----------------HHHHHHHHHh--cCCCeEEEEEccccCCCccccCChhhHHHHHH
Q 012138 192 AIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKE--SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRD 252 (470)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d-----------------~~~Le~~l~~--~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~ 252 (470)
++..+.+ .+++..+||++ ++.++++++. .++++++|++||++|++|.++|+++|+++|++
T Consensus 154 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~ 232 (443)
T PRK08360 154 VRALVGE-LSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKK 232 (443)
T ss_pred cccCCCC-CCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHH
Confidence 4445555 45555555543 3456677754 23589999999999999999988999999999
Q ss_pred HHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHH
Q 012138 253 LCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASA 332 (470)
Q Consensus 253 l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~a 332 (470)
+|++||++||+||+|+|||++|++++++++++.||++++||++++|+ |+|++++++++++.+....+.+|++++|++++
T Consensus 233 l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDiitlsK~l~~G~-pigav~~~~~i~~~~~~~~~~~T~~~~p~~~a 311 (443)
T PRK08360 233 ILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDIITLGKPLGGGL-PISATIGRAEIMDSLPPLAHAFTLSGNPVASA 311 (443)
T ss_pred HHHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEEEecccccCCc-eeEEEEEcHHHHhhhcCCCCCCCCCcCHHHHH
Confidence 99999999999999999999999888888899999999999999997 99999999999999977678889999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC-----chhHHHHHHHHHHcCc
Q 012138 333 VAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-----PVSAYDICLKMKERGI 407 (470)
Q Consensus 333 aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~-----~~~~~~~~~~l~~~Gv 407 (470)
++.++|+.++++++.++++++++++++.|+++..++| .+.++++.|+++.+++..+.. ...+..+...|+++|+
T Consensus 312 aa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi 390 (443)
T PRK08360 312 AALAVIEEIEEKNLLKRAEKLGNYTKKRLEEMKKKHE-LIGDVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGL 390 (443)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCC-CeeeeeccceEEEEEEecCCcccCccHHHHHHHHHHHHHCCe
Confidence 9999999998888999999999999999999987776 788999999999999864320 1235678899999999
Q ss_pred eeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccCC
Q 012138 408 LAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 447 (470)
Q Consensus 408 ~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~ 447 (470)
++.+...+.+||+||+.+|+++|++++++|+++++ ++++
T Consensus 391 ~~~~~~~~~lr~~P~l~~t~~~id~~~~~l~~~l~-~~~~ 429 (443)
T PRK08360 391 IVTFFSGNVLRIQPPLTIEKEVLDEGLDILEEAIE-DVEE 429 (443)
T ss_pred EEeecCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH-HHHh
Confidence 99776678999999999999999999999999999 7744
No 45
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=7.7e-62 Score=489.21 Aligned_cols=399 Identities=36% Similarity=0.648 Sum_probs=343.6
Q ss_pred CCCCchHHHHHHHhhhcccCCC-CCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCC
Q 012138 34 PSSSSSQQLINLEYEYSAHNYH-PVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSR 112 (470)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~ 112 (470)
.+.+.++++.+..+++..+.+. +.|+++++++|+|+||.||++||||.+++++.++||+||+|.+++.++++++.+...
T Consensus 12 ~~~~~s~~l~~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~ 91 (441)
T PRK05769 12 LPGPKAREIIERDEKYLAQSTRRWYPLVIERGEGVWVEDVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSL 91 (441)
T ss_pred CCCccHHHHHHHHHHhhCcccccCCCeeEEecceEEEEeCCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCccC
Confidence 3446678888877777766653 578999999999999999999999999999999999999999999999998766443
Q ss_pred -CCCCCcHHHHHHHHhhhhC---CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccC
Q 012138 113 -AFYNDKFPVFAERLTSMFG---YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 188 (470)
Q Consensus 113 -~~~~~~~~~l~~~l~~~~~---~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~ 188 (470)
.+.++...+++++|.+..+ .++++|++||+||++.|+|+++.+ .|+.+|+.+.++|||++.+++++++
T Consensus 92 ~~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~--------tgr~~Ii~~~~~yHG~t~~~ls~t~ 163 (441)
T PRK05769 92 TDFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYH--------TGRKYIIAFLGAFHGRTYGSLSLTA 163 (441)
T ss_pred cccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHH--------hCCCeEEEECCCcCCccHHHHHhcC
Confidence 3567788999999999874 479999999999999999999986 3667899999999999999998875
Q ss_pred C-cccccCCCCCCCCeeeecCCC------------------HHHHHH-HHHh--cCCCeEEEEEccccCCCccccCChhh
Q 012138 189 D-NEAIRGFGPLLPGHLKVDFGD------------------ITALEK-IFKE--SGDQIAGFLFEPIQGEAGVIIPPDGY 246 (470)
Q Consensus 189 ~-~~~~~~~~~~~~~~~~~~~~d------------------~~~Le~-~l~~--~~~~~~~vi~epi~n~~G~~~~~~~~ 246 (470)
. ...+..|.+..+++..+++++ ++.+++ +++. .++++++||+||+++.+|.+.|+++|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~ 243 (441)
T PRK05769 164 SKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNF 243 (441)
T ss_pred CCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHH
Confidence 4 345566777777766665532 234666 3332 24589999999999999999999999
Q ss_pred HHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcCCccCCCCC
Q 012138 247 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGG 326 (470)
Q Consensus 247 l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~ 326 (470)
+++|+++|++||+++|+||+|+||||+|.+|+++++++.||+++|||++++|+ |+|++++++++++.+ ...+++||++
T Consensus 244 l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDivt~~K~l~~G~-p~gav~~~~~i~~~~-~~~~~~T~~g 321 (441)
T PRK05769 244 FKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDIITLAKAIAGGL-PLGAVIGRAELMFLP-PGSHANTFGG 321 (441)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCCCCEEEEcccccCCc-ccEEEEEehhhhhcC-CCCCCCCCCc
Confidence 99999999999999999999999999999998999999999999999999997 999999999998654 4568899999
Q ss_pred CHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC---chhHHHHHHHHH
Q 012138 327 NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL---PVSAYDICLKMK 403 (470)
Q Consensus 327 ~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~l~ 403 (470)
+|++++++.++|+.+++ ++.+++++++++|++.|+++..++| .+..+++.|+++.+++..+.. ......+.+.|+
T Consensus 322 ~p~~~aaa~a~L~~l~~-~~~~~~~~~g~~l~~~L~~l~~~~~-~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~ 399 (441)
T PRK05769 322 NPVAAAAALATLEELEE-GLLENAQKLGEYLRKELKELKEKYE-FIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAF 399 (441)
T ss_pred CHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCC-CeeeeecceEEEEEEeccCCccccHHHHHHHHHHHH
Confidence 99999999999999998 9999999999999999999988786 788999999999999854310 123567888999
Q ss_pred HcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 404 ERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 404 ~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
++||++.+.+.+.+||+||+.+|++||++++++|++++. ++
T Consensus 400 ~~Gil~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~-~~ 440 (441)
T PRK05769 400 KRGLLLLGAGKSAIRIIPPLIITEEEADIGLEILEEAIK-EL 440 (441)
T ss_pred hCCcEEecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH-Hh
Confidence 999999887778999999999999999999999999997 53
No 46
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=100.00 E-value=2.8e-62 Score=493.46 Aligned_cols=378 Identities=30% Similarity=0.508 Sum_probs=326.1
Q ss_pred CCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCC-CCCCCcHHHHHHHHhhhhCC--
Q 012138 56 PVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMFGY-- 132 (470)
Q Consensus 56 ~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~-- 132 (470)
+.|+++++++|+|+||.||++||||.+++++.++||+||+|.+++.+|+++..+... .+.++...+++++|++..+.
T Consensus 20 ~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 99 (442)
T TIGR00709 20 KLPTAFAKAQGCWVTDVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKRK 99 (442)
T ss_pred CCCceEEeccccEEEeCCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCcC
Confidence 468999999999999999999999999999999999999999999999998654332 35677889999999998742
Q ss_pred ---CeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCC
Q 012138 133 ---DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG 209 (470)
Q Consensus 133 ---~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (470)
..+++++||+||++.|+|+++.| +|+..||++.++|||++.+++++++.+.++..+.+..+++..++++
T Consensus 100 ~~~~~~f~~~sGsEA~e~AlklAr~~--------tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~ 171 (442)
T TIGR00709 100 MDYKLQFPGPSGADAVEAAIKLAKTY--------TGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYP 171 (442)
T ss_pred CCccEEEeCCCHHHHHHHHHHHHHHh--------cCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCC
Confidence 33566799999999999999986 3667899999999999999999988666666677766666666654
Q ss_pred CH-----------------HHHHHHHHh---cCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccC
Q 012138 210 DI-----------------TALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 269 (470)
Q Consensus 210 d~-----------------~~Le~~l~~---~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g 269 (470)
+. +.+++.+.. ..+++++||+||+++++|.+.|+++|+++|+++|++||++||+||||+|
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG 251 (442)
T TIGR00709 172 HEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAG 251 (442)
T ss_pred ccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC
Confidence 31 224444432 2257999999999999999988999999999999999999999999999
Q ss_pred CcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHH
Q 012138 270 LARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAER 349 (470)
Q Consensus 270 ~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~ 349 (470)
|||+|++|+++++++.||++++||++++|+ |+|+++++++ ++.+....+++||++||++|+++.++|+.++++++.++
T Consensus 252 fGRtG~~~a~~~~gv~PDiv~~gK~l~~G~-Pigav~~~~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~~~l~~~ 329 (442)
T TIGR00709 252 FGRSGTMFAFEHAGIEPDFVVMSKAVGGGL-PLAVLLIAPE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKDDNLAQN 329 (442)
T ss_pred CCCCCchhHHHHcCCCCcEEEEcccccCCc-ccEEEEEchH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHhcCHHHH
Confidence 999999999999999999999999999997 9999999988 46665567889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC-----------chhHHHHHHHHHHcCceeccCC--CCE
Q 012138 350 SAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-----------PVSAYDICLKMKERGILAKPTH--DTI 416 (470)
Q Consensus 350 ~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~-----------~~~~~~~~~~l~~~Gv~~~~~~--~~~ 416 (470)
+++++++|++.|+++..++| .+.++++.|+|+++++..+.. ......+...|+++||++.+.+ +++
T Consensus 330 ~~~~g~~l~~~L~~l~~~~~-~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~ 408 (442)
T TIGR00709 330 AQERGERITSFLDDMIKEHP-CIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGREGEV 408 (442)
T ss_pred HHHHHHHHHHHHHHHHHhCC-CeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCCCCCE
Confidence 99999999999999988886 889999999999999954310 0125678888999999987653 689
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 417 VRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 417 iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
+||.||+++|++|+++++++|++++. ++
T Consensus 409 l~~~Ppl~it~~ei~~~~~~l~~~l~-~~ 436 (442)
T TIGR00709 409 FRLLCPITIDQEECEEGISRFKQAVE-EA 436 (442)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHH-HH
Confidence 99999999999999999999999998 65
No 47
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=100.00 E-value=1.3e-62 Score=480.60 Aligned_cols=357 Identities=35% Similarity=0.653 Sum_probs=323.9
Q ss_pred CCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCCeE
Q 012138 56 PVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMV 135 (470)
Q Consensus 56 ~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v 135 (470)
..|+++.+++|+|+||.||++||||.+++++.++||+||+|.+++.+|++++.+....+.++...+++++|+++.+.+++
T Consensus 5 ~~~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v 84 (364)
T PRK04013 5 RKRLRLVRGEGIYVWDSQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGPMFEHEEKEEMLEELSKWVNYEYV 84 (364)
T ss_pred CCCccEEEeecCEEEECCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCccCCcCCHHHHHHHHHHHhhcCCCEE
Confidence 46889999999999999999999999999999999999999999999999877655557788899999999999888999
Q ss_pred EecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHH
Q 012138 136 LPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALE 215 (470)
Q Consensus 136 ~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le 215 (470)
+|++||+||++.|+++++.+ ++++.||++..+|||++.+++++++.+.++..|.|..+++..+|++|+++++
T Consensus 85 ~~~~SGseA~e~Alklar~~--------~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~ 156 (364)
T PRK04013 85 YMGNSGTEAVEAALKFARLY--------TGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFNDVEAAK 156 (364)
T ss_pred EEeCchHHHHHHHHHHHHHH--------hCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCCCHHHHH
Confidence 99999999999999999986 3666899999999999999999998887888888888888999999999999
Q ss_pred HHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccc
Q 012138 216 KIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKAL 295 (470)
Q Consensus 216 ~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l 295 (470)
+.+.+ ++++|++||+++.+|.+.|+++|+++|+++|++||+++|+||+|+|| |+|++|+++++++.||+++++|++
T Consensus 157 ~~i~~---~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~a~~~~gv~PDiv~~gK~l 232 (364)
T PRK04013 157 EAITK---ETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKVEPDIVTMGKGI 232 (364)
T ss_pred HHhcC---CcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchhHHHhcCCCCCEEEecccc
Confidence 99975 89999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred cCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEE
Q 012138 296 GGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEV 375 (470)
Q Consensus 296 ~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~ 375 (470)
+||+ |+|+++.++++ ....+++||++||++|+++.++|+.++++++.+++++. |+++.. +.+.++
T Consensus 233 ggG~-P~~a~~~~~~~----~~~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~~~~~~~-------l~~l~~---~~v~~v 297 (364)
T PRK04013 233 GNGV-PVSLTLTNFDV----ERGKHGSTFGGNPLACKAVAVTLRILRRERLVEKAGEK-------FIEIKG---ERVVTT 297 (364)
T ss_pred cCCc-eeEEEEecccc----cCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHH-------HHHhcc---Ccceee
Confidence 9997 99999998775 23468899999999999999999999999998888764 233322 368899
Q ss_pred eccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 376 RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 376 ~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
|+.|+|+++++.. ....+.+.|+++|+++.+.+.+++||.||+++|++|+++++++|+++++ ++
T Consensus 298 RG~Gl~~gve~~~-----~~~~i~~~~~~~Gll~~~~g~~vlr~~Ppl~it~~~i~~~~~~l~~~l~-~~ 361 (364)
T PRK04013 298 RGRGLMIGIVLKK-----PVGKYVEELQNRGYLVHTAGQRVIRLLPPLIISKDTMEEAKSAIEGVIN-DI 361 (364)
T ss_pred eeCcEEEEEEeCC-----cHHHHHHHHHhCCcEEeeCCCCEEEEeCCcccCHHHHHHHHHHHHHHHH-HH
Confidence 9999999999964 3567899999999999887779999999999999999999999999998 54
No 48
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=8.4e-62 Score=487.49 Aligned_cols=394 Identities=33% Similarity=0.591 Sum_probs=339.4
Q ss_pred hHHHHHHHhhhcccCCCC-CceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCC-CCCC
Q 012138 39 SQQLINLEYEYSAHNYHP-VPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSR-AFYN 116 (470)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~-~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~ 116 (470)
+.++.+..+++....+.. .|+++++++|+|+||.||++||||.+++++.++||+||+|.+++.++++++.+... .+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~ 82 (421)
T PRK06777 3 NSELNQRRLEATPRGVGVMCDFYAERAENATLWDVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQIVPY 82 (421)
T ss_pred hHHHHHHHHHhcccccCcCCCeeEEeeecCEEEeCCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccccccccCC
Confidence 345555555555544432 37999999999999999999999999999999999999999999999998765432 2456
Q ss_pred CcHHHHHHHHhhhhC---CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCC-ccc
Q 012138 117 DKFPVFAERLTSMFG---YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD-NEA 192 (470)
Q Consensus 117 ~~~~~l~~~l~~~~~---~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~-~~~ 192 (470)
+...+++++|++..+ .++++|++||+||++.|+|+++.+ .++..|+.+.++|||++.+++++++. ..+
T Consensus 83 ~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~--------tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~ 154 (421)
T PRK06777 83 ASYVTLAERINALAPIDGPAKTAFFTTGAEAVENAVKIARAY--------TGRPGVIAFGGAFHGRTLLTMALTGKVAPY 154 (421)
T ss_pred hHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHHHHHHHHHHh--------hCCCeEEEEcCCcCCccHHHHhhcCCCccc
Confidence 778899999998864 579999999999999999999986 36678999999999999999988875 345
Q ss_pred ccCCCCCCCCeeeecCCC----------HHHHHHHHHh--cCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcE
Q 012138 193 IRGFGPLLPGHLKVDFGD----------ITALEKIFKE--SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNIL 260 (470)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d----------~~~Le~~l~~--~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gil 260 (470)
+..|.++.+++..+++++ ++++++.+++ .++++++||+||+++++|...++++|+++|+++|++||++
T Consensus 155 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~l 234 (421)
T PRK06777 155 KVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGIL 234 (421)
T ss_pred ccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 666777766666666654 6678888864 3468999999999999998888999999999999999999
Q ss_pred EEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHH
Q 012138 261 MIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDV 340 (470)
Q Consensus 261 lI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~ 340 (470)
||+||||+||||+|++++++++++.||++++||+++||+ |+|++++++++++.+....+++||++||++|+++.++|+.
T Consensus 235 lI~DEv~tg~gr~g~~~~~~~~~~~pDiv~~sK~l~~G~-pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~ 313 (421)
T PRK06777 235 LIADEVQTGFARTGKLFAMEYYDVKPDLITMAKSLGGGM-PISAVVGRAEVMDAPAPGGLGGTYAGNPLAVAAALAVLDV 313 (421)
T ss_pred EEEechhhCCccCCchhhhhhcCCCCCEEeeehhhcCCC-ceEEEEEcHHHHhccCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 999999999999999888899999999999999999997 9999999999999998777889999999999999999999
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCc----hhHHHHHHHHHHcCceeccCC--C
Q 012138 341 IRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP----VSAYDICLKMKERGILAKPTH--D 414 (470)
Q Consensus 341 ~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~~~l~~~Gv~~~~~~--~ 414 (470)
++++++.++++++++++++.|+++..++| .+..+++.|+|+.+++..+... .....+.+.|+++||++.|++ +
T Consensus 314 ~~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~g 392 (421)
T PRK06777 314 IAEEKLCQRALILGAHLVEVLEKAKASCP-AIVDIRARGSMVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGVHG 392 (421)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHhCC-CeEEecCceEEEEEEEecCccCCccHHHHHHHHHHHHhCCeEEeecCCCC
Confidence 98889999999999999999999988776 7889999999999988643211 124556677889999998864 5
Q ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 415 TIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 415 ~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
+++||+||+++|++++++++++|.+++.
T Consensus 393 ~~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 393 NVIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 7999999999999999999999999875
No 49
>PLN00144 acetylornithine transaminase
Probab=100.00 E-value=2.9e-62 Score=485.12 Aligned_cols=374 Identities=36% Similarity=0.575 Sum_probs=337.0
Q ss_pred EEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCCeEEecCC
Q 012138 61 FSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNT 140 (470)
Q Consensus 61 ~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~s 140 (470)
+++++|+|+||.||++||||.+++++.++||+||+|.+++.++++++.+....+.++...+++++|++..+.++|+|++|
T Consensus 1 ~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~f~~s 80 (382)
T PLN00144 1 FVSGKGCKLYDVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSNVYHTIPQVELAKRLVASSFADRVFFCNS 80 (382)
T ss_pred CeeeeccEEEeCCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCccccccCHHHHHHHHHHHhcCCCCeEEEeCC
Confidence 46899999999999999999999999999999999999999999987766554567788999999999888889999999
Q ss_pred hhHHHHHHHHHHHHhchhcccCCCC------CcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHH
Q 012138 141 GAEGVETALKLARKWGYVKKKFSID------EAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITAL 214 (470)
Q Consensus 141 GteA~~~al~~~~~~~~~~~~~~~g------~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~L 214 (470)
|+||++.|+|+++.++.. ++.+.+ +.+||.+.++|||++.+++++++.+.++..|.+..+++..+||+|+++|
T Consensus 81 GseA~e~AlklAr~~~~~-~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 159 (382)
T PLN00144 81 GTEANEAAIKFARKYQRV-RAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAA 159 (382)
T ss_pred cHHHHHHHHHHHHHHHhc-cCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHH
Confidence 999999999999986422 222111 4689999999999999999999887777788888888999999999999
Q ss_pred HHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecccc
Q 012138 215 EKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKA 294 (470)
Q Consensus 215 e~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~ 294 (470)
++++.. +++++|++||++||+|...++++|+++|+++|++||++||+||+|+|||++|.+++++++++.||+++|||+
T Consensus 160 ~~~~~~--~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PDi~t~sK~ 237 (382)
T PLN00144 160 RKLIQK--GKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPDIMTLAKP 237 (382)
T ss_pred HHhcCC--CCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCCEEEeccc
Confidence 998854 379999999999999998889999999999999999999999999999999998888889999999999999
Q ss_pred ccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEE
Q 012138 295 LGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKE 374 (470)
Q Consensus 295 l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~ 374 (470)
++||+ |+|++++++++++.+....+++||+++|++++++.++|++++++++.++++++++++++.|+++..++| .+..
T Consensus 238 l~~G~-pig~v~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~-~~~~ 315 (382)
T PLN00144 238 LAGGL-PIGAVLVTEKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNP-HVKE 315 (382)
T ss_pred ccCCc-ceEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhhCC-Ccee
Confidence 99997 999999999999999877889999999999999999999999899999999999999999998877775 6778
Q ss_pred EeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCC-CCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 375 VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-DTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 375 ~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
+++.|++++++++. ....+++.++++||++.+++ .+.+||+||+.++++++++++++|.+++. ++
T Consensus 316 vrg~G~~~~l~l~~-----~~~~~~~~~~~~Gv~i~~~~~~~~lrl~p~~~~~~~~i~~~~~~l~~~l~-~~ 381 (382)
T PLN00144 316 VRGVGLLVGIQLDV-----PAGPLVDACRDSGLLVLTAGKGDVVRLVPPLVISEAELEQAVEILADCLP-AL 381 (382)
T ss_pred eecCceEEEEEecC-----ccHHHHHHHHHCCeEEeecCCCCEEEEeCCCccCHHHHHHHHHHHHHHHH-hc
Confidence 89999999999842 35679999999999998864 58999999999999999999999999998 64
No 50
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=100.00 E-value=3.5e-62 Score=488.90 Aligned_cols=374 Identities=32% Similarity=0.565 Sum_probs=330.2
Q ss_pred CCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCC-CCCCCcHHHHHHHHhhhh--C-
Q 012138 56 PVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMF--G- 131 (470)
Q Consensus 56 ~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~--~- 131 (470)
+.|+++++++|+|+||.||++||||.+++++.++||+||+|.+++.+|+++..+... .+.++...+++++|++.. +
T Consensus 16 ~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~ 95 (412)
T TIGR02407 16 SFPTVFEKAKGSTLWDEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHSLDMATEAKREFLETFNEIILKPR 95 (412)
T ss_pred CCCceEEecccCEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceeccccCcHHHHHHHHHHHHhccCcc
Confidence 578999999999999999999999999999999999999999999999987544332 345777889999999863 2
Q ss_pred -C-CeEEe-cCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecC
Q 012138 132 -Y-DMVLP-MNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF 208 (470)
Q Consensus 132 -~-~~v~~-~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (470)
. ++++| +|||+||++.|+|+++.+ +++.+||++.++|||++.+++++++.+.++..+.+..+++..+|+
T Consensus 96 ~~~~~~~f~~~sGseA~e~AlklAr~~--------tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~ 167 (412)
T TIGR02407 96 GLDYKVQFPGPTGTNAVESALKLARKV--------TGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPY 167 (412)
T ss_pred CCCceEEEeCCCchHHHHHHHHHHhhh--------cCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCC
Confidence 3 25655 599999999999999986 366789999999999999999998877777778777777777887
Q ss_pred C--------CHHHHHHHHHhcC---CCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcc
Q 012138 209 G--------DITALEKIFKESG---DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML 277 (470)
Q Consensus 209 ~--------d~~~Le~~l~~~~---~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~ 277 (470)
+ +++.+++++.+++ +++++||+||+++++|.+.|+++|+++|+++|++||++||+||||+||||+|++|
T Consensus 168 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~ 247 (412)
T TIGR02407 168 DGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFF 247 (412)
T ss_pred CCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhH
Confidence 4 4778899887543 4689999999999999988899999999999999999999999999999999999
Q ss_pred ccccCCCCcceeeccccccC-CCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHH-HhhhhHHHHHHHHHH
Q 012138 278 ASDWEEVRPDMVILGKALGG-GVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDV-IRDEKLAERSAHLGE 355 (470)
Q Consensus 278 ~~~~~~~~pdi~s~sK~l~g-G~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~-~~~~~~~~~~~~~~~ 355 (470)
+++++++.||++++||+++| |+ |+|++++++++ +.+....+++||++||++|+++.++++. ++++++.++++++++
T Consensus 248 a~~~~~v~PDi~~~~K~lg~~G~-pigav~~~~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~ 325 (412)
T TIGR02407 248 SFEPAGIEPDIVCLSKSISGYGL-PLALTLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSE 325 (412)
T ss_pred HhcccCCCCCEEEechhccCCcc-ceeEEEEchhh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 99999999999999999998 97 99999999887 6666667889999999999999999995 777889999999999
Q ss_pred HHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCC--CCEEEEecCCCCCHHHHHHH
Q 012138 356 ELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEG 433 (470)
Q Consensus 356 ~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~--~~~iR~~~~~~~t~e~i~~~ 433 (470)
+++++|+++...+|..+..+++.|++++++++... ....+.+.|+++||++.+.+ .+.+||+||+.+|++|++++
T Consensus 326 ~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~l~~~~---~~~~~~~~~~~~Gv~v~~~~~~~~~lr~~p~l~~t~~~i~~~ 402 (412)
T TIGR02407 326 IIQERLDRIVAEYPELIKQVRGRGLMQGIECGDGD---LAGKIAKAAFENGLIIETSGPNDEVIKLLPPLTIDEETLQQG 402 (412)
T ss_pred HHHHHHHHHHhhCCCceEeeecceeEEEEEecChH---HHHHHHHHHHHCCCEEeccCCCCCEEEEECCCCCCHHHHHHH
Confidence 99999999888876456789999999999986543 56789999999999997653 57999999999999999999
Q ss_pred HHHHHHHHh
Q 012138 434 SKALHDVLE 442 (470)
Q Consensus 434 ~~~l~~~l~ 442 (470)
+++|+++++
T Consensus 403 ~~~l~~~l~ 411 (412)
T TIGR02407 403 LDILEQAVE 411 (412)
T ss_pred HHHHHHHHh
Confidence 999999987
No 51
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-62 Score=456.40 Aligned_cols=387 Identities=34% Similarity=0.574 Sum_probs=344.0
Q ss_pred ccCCCCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhh
Q 012138 51 AHNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMF 130 (470)
Q Consensus 51 ~~~~~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 130 (470)
...|.+.|+++.+++|+++||.+|++||||.++|++..+||++|++.+++.+++.++.++...++.....++++.|.+..
T Consensus 32 ~~t~a~~pv~~~~gkg~kl~D~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~~~t~eav~l~~~l~~~~ 111 (433)
T KOG1401|consen 32 VSTYARYPVVIESGKGSKLFDPDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNGYFTLEAVELEEVLSAVL 111 (433)
T ss_pred eeecCCCceeeecceeeeeecCCcceeeeeccceeccccCCCCHHHHHHHHHHHhhheeccCccccHHHHHHHHHHHhcc
Confidence 44577889999999999999999999999999999999999999999999999999998877665555788999999887
Q ss_pred ---CCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeec
Q 012138 131 ---GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVD 207 (470)
Q Consensus 131 ---~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (470)
..++|+|+|||||||+.||+++++.+..+ .|.++..+|.+.++|||+++++++.+++..++.++.|..|++...+
T Consensus 112 ~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~--~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ 189 (433)
T KOG1401|consen 112 GKGSAERVFFCNSGTEANETALKFARKFTGKK--HPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAE 189 (433)
T ss_pred cCCCccEEEEecCCcHHHHHHHHHHHHhhccc--CCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecc
Confidence 68999999999999999999999865443 3344567999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcc
Q 012138 208 FGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD 287 (470)
Q Consensus 208 ~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pd 287 (470)
|||..+|++.++.+.+.+++||+||+++.+|.++++++|+..|+++|+++|+++|.||||+||||+|..|++++++++||
T Consensus 190 ynd~t~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PD 269 (433)
T KOG1401|consen 190 YNDSTALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPD 269 (433)
T ss_pred cCCHHHHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCc
Confidence 99999999999999888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccccccCCCcceeEEEecHHHHhhcCcCCc---cCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Q 012138 288 MVILGKALGGGVIPVSAVLADKEVMLCIQPGEH---GSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKI 364 (470)
Q Consensus 288 i~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~---~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l 364 (470)
|.|++|.|+||+ |+|++++++++++.+.+..+ ++||++||++|.++..+++.+.++++.+++...++.|++.|.+.
T Consensus 270 I~t~aK~L~gGl-PigA~~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~ 348 (433)
T KOG1401|consen 270 ITTVAKPLGGGL-PIGATGVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEY 348 (433)
T ss_pred ceeehhhccCCc-eeEEEeehHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999997 99999999999999988766 99999999999999999999999999999999999999999998
Q ss_pred HhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCCC----CEEEEec--CCC--CCHHHHHHHHHH
Q 012138 365 QQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHD----TIVRLTP--PLS--ISSNELQEGSKA 436 (470)
Q Consensus 365 ~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~----~~iR~~~--~~~--~t~e~i~~~~~~ 436 (470)
..++|..+....++|+++++.+..+ ...+.+..++.|.++.+... ..+|+.| .+. +++|.+++++++
T Consensus 349 ~~~~~~~i~g~~grgl~ig~~~~~p-----~~~~~d~~~~~~ll~~~~~~~~~~~gv~i~P~~~l~~~~~~E~i~~~l~i 423 (433)
T KOG1401|consen 349 LKKTPNSICGGVGRGLVIGFEFEGP-----VYKFADAAREQGLLILTLGKGLLEEGVRIAPIYLLTVEHTPEVIQRLLTI 423 (433)
T ss_pred hccCCCceeeeeeeEEEEEEEEeec-----hhhhhhhhhhhhHHHHHHhcccccceEEEeccccccccCcHHHHHHHHHH
Confidence 8777655655588999999877653 34555556666665554432 3478888 333 348999999999
Q ss_pred HHHHHhcccC
Q 012138 437 LHDVLELDLP 446 (470)
Q Consensus 437 l~~~l~~~~~ 446 (470)
+.+.+. ++.
T Consensus 424 ~~~~l~-~~~ 432 (433)
T KOG1401|consen 424 LEKVLS-ALN 432 (433)
T ss_pred HHHHHH-Hhc
Confidence 999998 664
No 52
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=100.00 E-value=1.7e-61 Score=485.23 Aligned_cols=392 Identities=31% Similarity=0.563 Sum_probs=340.0
Q ss_pred HHHHHHhhhcccCCCC-CceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCC-CCCCCc
Q 012138 41 QLINLEYEYSAHNYHP-VPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSR-AFYNDK 118 (470)
Q Consensus 41 ~~~~~~~~~~~~~~~~-~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~ 118 (470)
++++....+..+.+.+ .|+++++++|+++||.||++||||.+++++.++||+||+|.+++.++++++.+... .+.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~ 84 (421)
T PRK09792 5 EFHQRRLSATPRGVGVMCNFFAQSAENATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYES 84 (421)
T ss_pred HHHHHHHhhcccccccCCCeeEEeccccEEEeCCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCcccCccCCHH
Confidence 4555544444444533 37899999999999999999999999999999999999999999999998765432 346777
Q ss_pred HHHHHHHHhhhhC---CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCC-ccccc
Q 012138 119 FPVFAERLTSMFG---YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD-NEAIR 194 (470)
Q Consensus 119 ~~~l~~~l~~~~~---~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~-~~~~~ 194 (470)
..+++++|++..+ .++++|++||+||++.|+|+++.+ +|+..|+++.++|||++.+++++++. ..++.
T Consensus 85 ~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~--------tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~ 156 (421)
T PRK09792 85 YVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAH--------TGRPGVIAFSGGFHGRTYMTMALTGKVAPYKI 156 (421)
T ss_pred HHHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHHHHHHh--------cCCCeEEEECCCcCCccHHHHhhcCCCccccc
Confidence 8899999998764 368999999999999999999986 36678999999999999999988775 34666
Q ss_pred CCCCCCCCeeeecCC----------CHHHHHHHHHhc--CCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEE
Q 012138 195 GFGPLLPGHLKVDFG----------DITALEKIFKES--GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMI 262 (470)
Q Consensus 195 ~~~~~~~~~~~~~~~----------d~~~Le~~l~~~--~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI 262 (470)
+|.++.+++..+|++ +++++++++++. .+++++|++||+++++|.+.++++|+++|+++|++||++||
T Consensus 157 ~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI 236 (421)
T PRK09792 157 GFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMI 236 (421)
T ss_pred CCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 777776666666663 357888888742 35799999999999999988899999999999999999999
Q ss_pred EeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHh
Q 012138 263 ADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR 342 (470)
Q Consensus 263 ~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~ 342 (470)
+||+|+||||+|++++++++++.||+++|||+++||+ |+|++++++++++.+....+++||++||++|+++.++++.++
T Consensus 237 ~DEv~tg~gr~G~~~a~~~~~~~pDi~t~gK~l~~G~-pigav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~ 315 (421)
T PRK09792 237 ADEVQSGFARTGKLFAMDHYADKPDLMTMAKSLAGGM-PLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIID 315 (421)
T ss_pred EeccccCCCCCCchhHHHhcCCCCcEEEeehhhcCCC-ceEEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999998899999999999999999997 999999999999998877889999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC----chhHHHHHHHHHHcCceeccCC--CCE
Q 012138 343 DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL----PVSAYDICLKMKERGILAKPTH--DTI 416 (470)
Q Consensus 343 ~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~~l~~~Gv~~~~~~--~~~ 416 (470)
++++.++++++++++++.|+++..++| .+..+++.|+++++++..+.. ......+++.|+++||++.+.+ ++.
T Consensus 316 ~~~~~~~~~~~g~~l~~~l~~l~~~~p-~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~g~~~~~ 394 (421)
T PRK09792 316 KESLCERANQLGQRLKNTLIDAKESVP-AIAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCGAYGNV 394 (421)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhCC-CcceecccceEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEeecCCCCCE
Confidence 888999999999999999999988886 678899999999999964321 1246778999999999987533 589
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 417 VRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 417 iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
+||.||+.++++||++++++|.+++.
T Consensus 395 irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 395 IRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred EEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999886
No 53
>PRK06917 hypothetical protein; Provisional
Probab=100.00 E-value=1e-61 Score=488.61 Aligned_cols=385 Identities=34% Similarity=0.543 Sum_probs=330.0
Q ss_pred CCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCC-CCCCCcHHHHHHHHhhhhC--C
Q 012138 56 PVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMFG--Y 132 (470)
Q Consensus 56 ~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~--~ 132 (470)
+.| ++++++|+|+||.||++||||.+++++.++||+||+|.+++.+|++++.+... .+.++...+++++|++.++ .
T Consensus 13 ~~p-~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 91 (447)
T PRK06917 13 PYP-VISHGKGVYLYDQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRSQFTSEPAEKLAKKLSDLSPGDL 91 (447)
T ss_pred CCC-eEEeeeeeEEEeCCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCC
Confidence 456 58999999999999999999999999999999999999999999998755433 3567888999999999874 4
Q ss_pred CeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeec-----
Q 012138 133 DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVD----- 207 (470)
Q Consensus 133 ~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 207 (470)
++++|++||+||++.|+|+++.|+. .++. +++.+|+.+.++|||++.+++++++....+..|.+..+++..++
T Consensus 92 ~~v~f~~sGsEAve~AlklAr~~~~-~rg~-t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~ 169 (447)
T PRK06917 92 NWSFFVNSGSEANETAMKIAIQHFQ-ERGI-QGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCY 169 (447)
T ss_pred CEEEEeCChHHHHHHHHHHHHHHHH-hcCC-CCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCccc
Confidence 6899999999999999999988631 1221 35679999999999999999998877666555655544322222
Q ss_pred ------------CCCHHHHHHHHHhcC-CCeEEEEEccccC-CCccccCChhhHHHHHHHHHhcCcEEEEeccccCCccc
Q 012138 208 ------------FGDITALEKIFKESG-DQIAGFLFEPIQG-EAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS 273 (470)
Q Consensus 208 ------------~~d~~~Le~~l~~~~-~~~~~vi~epi~n-~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~ 273 (470)
+++++.+++++++++ +++++||+||+++ .+|.+.|+++|+++|+++|++||+++|+|||++||||+
T Consensus 170 ~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRt 249 (447)
T PRK06917 170 RCPVQKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRT 249 (447)
T ss_pred ccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcc
Confidence 113567888887654 4799999999987 46799999999999999999999999999999999999
Q ss_pred CCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcC----CccCCCCCCHHHHHHHHHHHHHHhhhhHHHH
Q 012138 274 GRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG----EHGSTFGGNPLASAVAIASLDVIRDEKLAER 349 (470)
Q Consensus 274 G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~----~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~ 349 (470)
|++|+++++++.||++++||+++||++|+|++++++++++.+... .+++||++||++++++.++|+.++++++.++
T Consensus 250 G~~~a~~~~gv~PDi~~~gK~l~~G~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~ 329 (447)
T PRK06917 250 GAMFAMEHWGVEPDIMTLGKGLGAGYTPIAATVVSDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKHNLPEK 329 (447)
T ss_pred cchhhHHhcCCCCCEEEeeehhccCCcceEEEEEcHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHCCHHHH
Confidence 999999999999999999999999966999999999999987542 4678999999999999999999998899999
Q ss_pred HHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC--------chhHHHHHHHHHHcCceeccCC-------C
Q 012138 350 SAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL--------PVSAYDICLKMKERGILAKPTH-------D 414 (470)
Q Consensus 350 ~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~--------~~~~~~~~~~l~~~Gv~~~~~~-------~ 414 (470)
+++++++|++.|+++..++| .+.++++.|+|+.+++..+.. ......+++.|+++||++.+.. .
T Consensus 330 ~~~~g~~l~~~L~~l~~~~~-~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~ 408 (447)
T PRK06917 330 AAEKGEYLIKGLQKVQQQST-IIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEG 408 (447)
T ss_pred HHHHHHHHHHHHHHHHhcCC-CEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecccccCCCCC
Confidence 99999999999999988886 889999999999999953210 0135678889999999997652 5
Q ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 415 TIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 415 ~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
+.+||+||+++|++||++++++|.++++ ++
T Consensus 409 ~~i~l~Ppl~it~~eid~~~~~l~~~l~-~~ 438 (447)
T PRK06917 409 DAVIIAPPMTITYSELDELLSIFAKSVE-EM 438 (447)
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHHHHH-HH
Confidence 7999999999999999999999999998 76
No 54
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=100.00 E-value=1.2e-61 Score=487.33 Aligned_cols=385 Identities=32% Similarity=0.566 Sum_probs=332.7
Q ss_pred ccCC-CCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCC-CCCCCcHHHHHHHHhh
Q 012138 51 AHNY-HPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSR-AFYNDKFPVFAERLTS 128 (470)
Q Consensus 51 ~~~~-~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~ 128 (470)
...+ .+.|+++++++|+|+||.||++||||.+++++.++||+||+|.+++.+|+++..+... .+.++...+++++|++
T Consensus 14 ~~~~~~~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~ 93 (425)
T PRK09264 14 VRSYCRSFPVVFDKAKGSWLYDEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGLDMHTTAKREFLETFEE 93 (425)
T ss_pred HhccCCCCCccEEeeecCEEEeCCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHH
Confidence 3334 3578999999999999999999999999999999999999999999999987544332 3456778899999988
Q ss_pred hh----CCC-eEEe-cCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCC
Q 012138 129 MF----GYD-MVLP-MNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG 202 (470)
Q Consensus 129 ~~----~~~-~v~~-~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~ 202 (470)
.. +.+ +++| +|||+||++.|+|+++.+ +++.+||++.++|||++.+++++++.+.++..+.+..++
T Consensus 94 ~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~--------tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~ 165 (425)
T PRK09264 94 TILKPRGLDYKVQFTGPTGTNAVEAALKLARKV--------TGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNN 165 (425)
T ss_pred hhcCCcCCCceEEEeCCCHHHHHHHHHHHHHHh--------cCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCC
Confidence 64 244 5656 589999999999999986 366789999999999999999998877777777777677
Q ss_pred eeeecCC--------CHHHHHHHHHhcC---CCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCc
Q 012138 203 HLKVDFG--------DITALEKIFKESG---DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 271 (470)
Q Consensus 203 ~~~~~~~--------d~~~Le~~l~~~~---~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g 271 (470)
+..+|++ |+++|++++++++ +++++||+||+++.+|.+.++++|+++|+++|++||++||+||||+|||
T Consensus 166 ~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~G 245 (425)
T PRK09264 166 VTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCG 245 (425)
T ss_pred eEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCc
Confidence 7777774 7788999997542 4689999999999999988899999999999999999999999999999
Q ss_pred ccCCccccccCCCCcceeeccccccC-CCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHH-HHHhhhhHHHH
Q 012138 272 RSGRMLASDWEEVRPDMVILGKALGG-GVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASL-DVIRDEKLAER 349 (470)
Q Consensus 272 ~~G~~~~~~~~~~~pdi~s~sK~l~g-G~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l-~~~~~~~~~~~ 349 (470)
|+|.+|+++++++.||++++||++++ |+ |+|++++++++ +.+....+++||++||++++++.+++ +.++++++.++
T Consensus 246 rtG~~~~~~~~~v~PDi~t~~K~l~~~G~-pigav~~~~~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~~~~l~~~ 323 (425)
T PRK09264 246 RTGTFFSFERAGITPDIVTLSKSISGYGL-PMALVLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEEYWSDDAFEKE 323 (425)
T ss_pred cccHHHHHhhcCCCCCEEEeccccCCCcc-ceEEEEEchhh-hccCCCccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHH
Confidence 99999989999999999999999998 97 99999999987 46655678889999999999999999 66667789999
Q ss_pred HHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCC--CCEEEEecCCCCCH
Q 012138 350 SAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISS 427 (470)
Q Consensus 350 ~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~--~~~iR~~~~~~~t~ 427 (470)
++++++++++.|+++..++|..+..+++.|++++++++... ....+++.|+++||++.+.+ .+.|||+||+.+|+
T Consensus 324 ~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~~~---~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~p~l~~t~ 400 (425)
T PRK09264 324 VKAKGELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGDGE---LAGKIAAEAFENGLIIETSGPEDEVVKLLPPLTIDE 400 (425)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceecceecccEEEEEecChH---HHHHHHHHHHHCCCEEeccCCCCCEEEEeCCCCCCH
Confidence 99999999999999877775334678999999999886543 56789999999999997754 57999999999999
Q ss_pred HHHHHHHHHHHHHHhcccCCCC
Q 012138 428 NELQEGSKALHDVLELDLPKMR 449 (470)
Q Consensus 428 e~i~~~~~~l~~~l~~~~~~~~ 449 (470)
++|++++++|.++++ ++.+..
T Consensus 401 ~ei~~~~~~l~~~l~-~~~~~~ 421 (425)
T PRK09264 401 EELEEGLDILEEAVA-EVLAEE 421 (425)
T ss_pred HHHHHHHHHHHHHHH-HHHhcc
Confidence 999999999999999 764433
No 55
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-61 Score=488.37 Aligned_cols=396 Identities=34% Similarity=0.596 Sum_probs=341.5
Q ss_pred hHHHHHHHhhhcccCCCC-C-ceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccC-CCCC
Q 012138 39 SQQLINLEYEYSAHNYHP-V-PIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSS-RAFY 115 (470)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~-~-p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-~~~~ 115 (470)
..++++...++..+.+.. . |+++++++|+++||.||++||||.+++++.++||+||+|.+++.++++++.+.+ ..+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~ 84 (433)
T PRK08117 5 WSDLVERYPQLLAPALAKDHPNLPVVKGEGCYYYGVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGVIY 84 (433)
T ss_pred HHHHHHHHHHHhhhhccccCCCceEEeeeeeEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccccC
Confidence 456666666665554432 3 489999999999999999999999999999999999999999999999876654 2356
Q ss_pred CCcHHHHHHHHhhhh--CCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCC-ccc
Q 012138 116 NDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD-NEA 192 (470)
Q Consensus 116 ~~~~~~l~~~l~~~~--~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~-~~~ 192 (470)
++...+++++|+++. +.++++|++||+||++.|+++++.+ .|+..|++++++|||++.+++++++. +.+
T Consensus 85 ~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e~AlklAr~~--------tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~ 156 (433)
T PRK08117 85 YESILKLAEELAEITPGGLDCFFFSNSGAEAIEGALKLAKHV--------TKRPYIISFTGCFHGRTLGALSVTTSKSKY 156 (433)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHh--------cCCCeEEEECCCcCCcCHHHHhhcCCCccc
Confidence 788899999999987 3678999999999999999999986 36678999999999999999887763 445
Q ss_pred ccCCCCCCCCeeeecCC-----------------CHHHHHHHHHh--cCCCeEEEEEccccCCCccccCChhhHHHHHHH
Q 012138 193 IRGFGPLLPGHLKVDFG-----------------DITALEKIFKE--SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDL 253 (470)
Q Consensus 193 ~~~~~~~~~~~~~~~~~-----------------d~~~Le~~l~~--~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l 253 (470)
+..+.+..+++..+|++ |++++++++++ .++++++||+||+++++|.+.|+++|+++|+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~l 236 (433)
T PRK08117 157 RKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREI 236 (433)
T ss_pred cccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHH
Confidence 55566666666555553 45678888764 235799999999999999999999999999999
Q ss_pred HHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHH
Q 012138 254 CSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAV 333 (470)
Q Consensus 254 ~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aa 333 (470)
|++||++||+||||+|||++|++++.+++++.||+++|||++++|+ |+|++++++++++.+....+++||++||+++++
T Consensus 237 c~~~g~llI~DEv~tG~gr~G~~~~~~~~gv~pDi~t~sK~lg~G~-pigav~~~~~i~~~~~~~~~~~T~~~np~~~aa 315 (433)
T PRK08117 237 CDRHGILLIFDEVQTGFGRTGEWFAAQTFGVVPDIMTIAKGIASGL-PLSAVVASKELMEQWPLGSHGTTFGGNPVACAA 315 (433)
T ss_pred HHHcCCEEEEecchhccCccccchhHhhcCCCCCEeehhhhccCCC-cceeEEEcHHHHhhccCCCCCCCCCcCHHHHHH
Confidence 9999999999999999999999988888999999999999999997 999999999999988777888999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC---chhHHHHHHHHHHcCceec
Q 012138 334 AIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL---PVSAYDICLKMKERGILAK 410 (470)
Q Consensus 334 a~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~l~~~Gv~~~ 410 (470)
+.++|+.++++++.++++++++++++.|+++..++| .+..+++.|+++++++..+.. ......+.+.|+++||++.
T Consensus 316 a~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~ 394 (433)
T PRK08117 316 ALATLEVIKEEKLLDNANEMGAYALERLEVLKEKHP-VIGDVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFY 394 (433)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCC-ceeeeecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEe
Confidence 999999998888999999999999999999987776 777899999999999864320 1245678899999999987
Q ss_pred cCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 411 PTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 411 ~~~--~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
+.+ .+++||+||+.+|+++|++++++|.++++ ++
T Consensus 395 ~~g~~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~-~~ 430 (433)
T PRK08117 395 LCGNAGNVLRMIPPLTVTKEEIDEGLDILDEALT-EY 430 (433)
T ss_pred ecCCCCCEEEEeCCccCCHHHHHHHHHHHHHHHH-HH
Confidence 543 58999999999999999999999999998 76
No 56
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=100.00 E-value=3.5e-61 Score=487.67 Aligned_cols=404 Identities=33% Similarity=0.596 Sum_probs=347.2
Q ss_pred CCCCCchHHHHHHHhhhcccCCC-CCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccC
Q 012138 33 SPSSSSSQQLINLEYEYSAHNYH-PVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSS 111 (470)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~ 111 (470)
..+.+++++++++.+++....+. ..|+++++++|+|+||.|||+||||.+++++.++||+||+|.+++.++++++.+..
T Consensus 11 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~ 90 (451)
T PRK06918 11 QIPGPKAASLLERRQNIVPKGVSNGIPTFAQSANGALVTDVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTG 90 (451)
T ss_pred cCCCCCHHHHHHHHHHhhccccccCCCceEEeccccEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCcc
Confidence 34457788999998888877653 45899999999999999999999999999999999999999999999999876543
Q ss_pred C-CCCCCcHHHHHHHHhhhhC--C-CeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhccc
Q 012138 112 R-AFYNDKFPVFAERLTSMFG--Y-DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMS 187 (470)
Q Consensus 112 ~-~~~~~~~~~l~~~l~~~~~--~-~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~ 187 (470)
. .+.++...+++++|++..+ . ++++|++||+||++.|+|+++.| .++..||.+.++|||++.++++++
T Consensus 91 ~~~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~--------tgr~~ii~~~~~yHG~t~~~ls~~ 162 (451)
T PRK06918 91 FNVMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKY--------TKRQGIISFSRGFHGRTLMTMTMT 162 (451)
T ss_pred ccccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHH--------hCCCcEEEECCCcCccchhhhhhc
Confidence 2 3567888999999999874 3 69999999999999999999986 366789999999999999999887
Q ss_pred CC-cccccCCCCCCCCeeeecCCC-----------------HHHHHHHHHh--cCCCeEEEEEccccCCCccccCChhhH
Q 012138 188 CD-NEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKE--SGDQIAGFLFEPIQGEAGVIIPPDGYL 247 (470)
Q Consensus 188 ~~-~~~~~~~~~~~~~~~~~~~~d-----------------~~~Le~~l~~--~~~~~~~vi~epi~n~~G~~~~~~~~l 247 (470)
+. ..++..|.++.+++..+|+++ ++.+++.+.. .++++++||+||+++.+|.++|+++|+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l 242 (451)
T PRK06918 163 SKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFV 242 (451)
T ss_pred CCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHH
Confidence 74 345666777777666665542 1235554432 235899999999999999999899999
Q ss_pred HHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcCCccCCCCCC
Q 012138 248 KAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGN 327 (470)
Q Consensus 248 ~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~ 327 (470)
++|+++|++||++||+||||+||+|+|.+++++++++.||+++|||++++|+ |+|++++++++++.+....+++||+++
T Consensus 243 ~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~t~sK~l~~G~-pig~v~~~~~i~~~~~~~~~~~T~~g~ 321 (451)
T PRK06918 243 QEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPDLITVSKSLGAGV-PISGVIGRKEIMDESAPGELGGTYAGS 321 (451)
T ss_pred HHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCCEEeeehhhcCCC-ccEEEEEcHHHHhccCCCCcCcCCCcC
Confidence 9999999999999999999999999998888888999999999999999997 999999999999998877888999999
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCC---C--chhHHHHHHHH
Q 012138 328 PLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA---L--PVSAYDICLKM 402 (470)
Q Consensus 328 ~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~---~--~~~~~~~~~~l 402 (470)
+++++++.++|+.++++++.+++++++++++++|+++...+| .+..+++.|+++.|++..+. . ......+.+.|
T Consensus 322 ~l~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~-~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 400 (451)
T PRK06918 322 PLGCAAALAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYN-CIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEA 400 (451)
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhCC-CceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHH
Confidence 999999999999998889999999999999999999877775 67889999999999884221 0 12356788888
Q ss_pred HHcCceeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHhcccCC
Q 012138 403 KERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 447 (470)
Q Consensus 403 ~~~Gv~~~~~~--~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~ 447 (470)
+++||++.+++ ++++||+||+.+|+++|++++++|++++. ++.+
T Consensus 401 ~~~Gvlv~~~~~~~~~lrl~p~l~~t~~~id~~l~~l~~~l~-~~~~ 446 (451)
T PRK06918 401 NKRGLLLLSAGTYGNVIRVLMPLVITDEQLEEGLTIIEESLQ-ACYE 446 (451)
T ss_pred HHCCeEEeecCCCCCEEEEECCCccCHHHHHHHHHHHHHHHH-HHHH
Confidence 99999998764 48999999999999999999999999998 7643
No 57
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=3.1e-61 Score=485.23 Aligned_cols=384 Identities=31% Similarity=0.512 Sum_probs=332.6
Q ss_pred CCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCC-CCCCCcHHHHHHHHhhhhC--C
Q 012138 56 PVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMFG--Y 132 (470)
Q Consensus 56 ~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~--~ 132 (470)
+.|+++++++|+++||.||++||||.+++++.++||+||+|.+++.++++++.+... .+.++...+++++|++..+ .
T Consensus 23 ~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~ 102 (423)
T PRK05964 23 PPPIPIVRAEGAYLYLADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAGFTHEPAERLAQRLVALTPGGL 102 (423)
T ss_pred CCCeeEEeccccEEEeCCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCC
Confidence 368999999999999999999999999999999999999999999999998765443 3567888999999999874 6
Q ss_pred CeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeee--cCCC
Q 012138 133 DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKV--DFGD 210 (470)
Q Consensus 133 ~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d 210 (470)
++++|++||+||++.|+|+++.|+... + .+++.+||++.++|||++.+++++++.+.++..+.+..++...+ |++|
T Consensus 103 ~~v~f~~sGseA~e~A~klar~~~~~~-~-~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d 180 (423)
T PRK05964 103 DHVFFSDSGSVAVEVALKMALQYWRNR-G-EPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDG 180 (423)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhc-C-CCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcch
Confidence 899999999999999999999864322 1 13677999999999999999999887766555566655554444 4456
Q ss_pred -----HHHHHHHHHhcCCCeEEEEEcc-ccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCC
Q 012138 211 -----ITALEKIFKESGDQIAGFLFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV 284 (470)
Q Consensus 211 -----~~~Le~~l~~~~~~~~~vi~ep-i~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~ 284 (470)
++++++++.++++++++||+|| +++.+|.+.++++|+++|+++|++||++||+||||+||||+|.+++++++++
T Consensus 181 ~~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v 260 (423)
T PRK05964 181 YEQATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGV 260 (423)
T ss_pred hHHHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCC
Confidence 8889999986667899999999 7999999999999999999999999999999999999999999988899999
Q ss_pred CcceeeccccccCCCcceeEEEecHHHHhhcCcC------CccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 012138 285 RPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG------EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELR 358 (470)
Q Consensus 285 ~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~------~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~ 358 (470)
.||++++||+++||++|+|++++++++++.+... .+++||++||++++++.++|+.++++++.+++++++++++
T Consensus 261 ~pDi~~~~K~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~ 340 (423)
T PRK05964 261 SPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVLERVAALSAGLA 340 (423)
T ss_pred CCCeeeeehhhhcCcccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 9999999999998855999999999999987532 4778999999999999999999988889999999999999
Q ss_pred HHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHH
Q 012138 359 QHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALH 438 (470)
Q Consensus 359 ~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~ 438 (470)
+.|+++.. +| .+..+++.|+++.+++..+........+.+.|.++||++.+. .+.+||+||+.+|++||++++++|+
T Consensus 341 ~~l~~l~~-~~-~i~~vrg~Gl~~~i~l~~~~~~~~~~~l~~~l~~~Gv~v~~~-~~~lR~~p~l~~t~edId~~v~~l~ 417 (423)
T PRK05964 341 EGLEPFRD-LP-GVADVRVLGAIGAVELDRPVLERDGPALRAFALERGVLLRPL-GNTIYLMPPYIITAEELDRITDAIV 417 (423)
T ss_pred HHHHhhcc-CC-CeEEeecccEEEEEEeccCcchhHHHHHHHHHHHCCeEEEec-CCEEEEeCCcccCHHHHHHHHHHHH
Confidence 99998843 54 677889999999998864320013668999999999999875 4789999999999999999999999
Q ss_pred HHHhccc
Q 012138 439 DVLELDL 445 (470)
Q Consensus 439 ~~l~~~~ 445 (470)
++++ |+
T Consensus 418 ~al~-~~ 423 (423)
T PRK05964 418 EVAD-EL 423 (423)
T ss_pred HHHh-hC
Confidence 9998 64
No 58
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=4.9e-61 Score=483.04 Aligned_cols=378 Identities=33% Similarity=0.562 Sum_probs=330.7
Q ss_pred CCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCC-CCCCCcHHHHHHHHhhhhC--
Q 012138 55 HPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMFG-- 131 (470)
Q Consensus 55 ~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~-- 131 (470)
.++|+++++++|+++||.||++||||.+++++.++||+||+|.+++.++++++.+... .+.++...+++++|.+..+
T Consensus 13 ~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~ 92 (420)
T TIGR00700 13 VTLPVFAARAEGAILEDVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLNRIAPGS 92 (420)
T ss_pred CCCCeeEEeeeeeEEEeCCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccccccCChHHHHHHHHHHHhCCCC
Confidence 4679999999999999999999999999999999999999999999999998765443 2456678899999998873
Q ss_pred -CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCc-ccccCCCCCCCCeeeecCC
Q 012138 132 -YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDN-EAIRGFGPLLPGHLKVDFG 209 (470)
Q Consensus 132 -~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 209 (470)
.++++|++||+||++.|+|+++.+ .|+..||++.++|||++.+++++++.. .++..|.++.+++..++++
T Consensus 93 ~~~~v~f~~sGseA~e~AlklAr~~--------tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (420)
T TIGR00700 93 GPKKSVFFNSGAEAVENAVKIARSY--------TGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLP 164 (420)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHh--------cCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCC
Confidence 478999999999999999999986 356689999999999999999887753 3566677776666555553
Q ss_pred ----------------CHHHHHHHHH--hcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCc
Q 012138 210 ----------------DITALEKIFK--ESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 271 (470)
Q Consensus 210 ----------------d~~~Le~~l~--~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g 271 (470)
+++.+++++. ..++++++||+||+++.+|.++|+++|+++|+++|++||++||+||||+||+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~g 244 (420)
T TIGR00700 165 YPYRDGLLDKQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFA 244 (420)
T ss_pred ccccccccccchhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCc
Confidence 2567777774 2346899999999999999999999999999999999999999999999999
Q ss_pred ccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHH
Q 012138 272 RSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSA 351 (470)
Q Consensus 272 ~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~ 351 (470)
|+|.+++++++++.||+++|||++++|+ |+|++++++++++.+....+++||++||++|+++.++|+.++++++.++++
T Consensus 245 r~g~~~a~~~~~~~pDi~~lsK~l~~G~-pig~v~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~ 323 (420)
T TIGR00700 245 RTGAMFACEHEGPEPDLITTAKSLADGL-PLSGVTGRAEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERAR 323 (420)
T ss_pred ccchhHHHhhcCCCCCEEEeeccccCCc-ceEEEEecHHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHH
Confidence 9999888899999999999999999998 999999999999998877889999999999999999999998889999999
Q ss_pred HHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC----chhHHHHHHHHHHcCceeccCC--CCEEEEecCCCC
Q 012138 352 HLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL----PVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSI 425 (470)
Q Consensus 352 ~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~~l~~~Gv~~~~~~--~~~iR~~~~~~~ 425 (470)
++++++++.|+++...+| .+..+++.|+|+++++..+.. ......+.+.|+++||++.|++ ++++||+||+.+
T Consensus 324 ~~g~~l~~~L~~l~~~~~-~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f~~~lRl~p~l~~ 402 (420)
T TIGR00700 324 QIGRLVTDRLTTLKAVDP-RIGDVRGLGAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMFGNIIRFLPPLTI 402 (420)
T ss_pred HHHHHHHHHHHHHHhhCC-CEEEeeccceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCCc
Confidence 999999999999987775 678899999999998843210 1235677788889999998864 589999999999
Q ss_pred CHHHHHHHHHHHHHHHh
Q 012138 426 SSNELQEGSKALHDVLE 442 (470)
Q Consensus 426 t~e~i~~~~~~l~~~l~ 442 (470)
+++++++++++|.++++
T Consensus 403 ~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 403 GDELLSEGLDILCAILA 419 (420)
T ss_pred CHHHHHHHHHHHHHHhh
Confidence 99999999999999885
No 59
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=1.4e-60 Score=477.08 Aligned_cols=398 Identities=24% Similarity=0.333 Sum_probs=323.8
Q ss_pred CCCCCchHHHHHHHhhhcccCCCCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHH--HHHcccc
Q 012138 33 SPSSSSSQQLINLEYEYSAHNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQ--AEKLTLS 110 (470)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~--~~~~~~~ 110 (470)
..+.+++++++++..++......++|+++++++|+|+||.||++||||.+++++.++||+||+|.+++.++ ...+.+.
T Consensus 16 ~~~~~~s~~l~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~~ 95 (464)
T TIGR00699 16 EIPGPKSKAAMKQLNEVFDARAVHFLADYEKSRGNYLVDVDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLINR 95 (464)
T ss_pred CCCCccHHHHHHHHHhhhcccCcccceEEEecccCEEEeCCCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhccc
Confidence 34456788899988887633223679999999999999999999999999999999999999999999985 4444333
Q ss_pred CCCCCCCcHHHHHHHHhh----hh--CCCeEEecCChhHHHHHHHHHHHHhchhc-cc----------------CCCC--
Q 012138 111 SRAFYNDKFPVFAERLTS----MF--GYDMVLPMNTGAEGVETALKLARKWGYVK-KK----------------FSID-- 165 (470)
Q Consensus 111 ~~~~~~~~~~~l~~~l~~----~~--~~~~v~~~~sGteA~~~al~~~~~~~~~~-~~----------------~~~g-- 165 (470)
+ .+.++...+++++|.+ .. +.++|+|+|||+||++.|+|+++.|+... ++ .++|
T Consensus 96 ~-~~~~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~ 174 (464)
T TIGR00699 96 P-ALGNFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSP 174 (464)
T ss_pred c-cCCcHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCc
Confidence 3 2556677888888754 44 35799999999999999999999864221 11 0122
Q ss_pred CcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecC-------------------CCHHHHHHHHHhcCCCeE
Q 012138 166 EAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF-------------------GDITALEKIFKESGDQIA 226 (470)
Q Consensus 166 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~d~~~Le~~l~~~~~~~~ 226 (470)
+.+||++.++|||++.+++++++.+..+....+ .+++..+|+ +++++|++++++++++++
T Consensus 175 r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~-~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iA 253 (464)
T TIGR00699 175 DLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIP-AFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVA 253 (464)
T ss_pred CCEEEEECCCcCCccHHHHHhcCCccccccCCC-CCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEE
Confidence 238999999999999999998876433322211 112222221 246778888876666899
Q ss_pred EEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCC--cceeecccccc-CCCccee
Q 012138 227 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR--PDMVILGKALG-GGVIPVS 303 (470)
Q Consensus 227 ~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~--pdi~s~sK~l~-gG~~~ig 303 (470)
+||+||+++.+|.+.|+++|+++|+++|++||++||+||||+||||+|.+|+++++|+. ||++++||+++ ||+ .
T Consensus 254 AvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~gK~lg~gG~-~-- 330 (464)
T TIGR00699 254 AIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTFSKKFQTAGY-F-- 330 (464)
T ss_pred EEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEehhhhccCCc-c--
Confidence 99999999999999999999999999999999999999999999999999999999997 99999999995 686 2
Q ss_pred EEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEe--cccee
Q 012138 304 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR--GRGLF 381 (470)
Q Consensus 304 ~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~--~~g~~ 381 (470)
+.++ .........+++||++||++|+++.++|+.++++++.+++++++++|++.|+++..++|..+.+++ +.|+|
T Consensus 331 --~~~~-~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm 407 (464)
T TIGR00699 331 --FHDP-AFRPNKPYRQFNTWMGDPSRALILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTF 407 (464)
T ss_pred --ccch-hccCCCCcccccCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEE
Confidence 2332 222223446889999999999999999999999999999999999999999999887764688999 99999
Q ss_pred EEEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 012138 382 NAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 441 (470)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l 441 (470)
+.+++.... ....+.+.|+++||++.+.+.+.+||.||+.+|++||++++++|.+++
T Consensus 408 ~gie~~~~~---~~~~i~~~~~~~Gvl~~~~g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 408 IAWDTPDEA---KRDKLLKKARNNGVNIGGCGVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred EEEecCCHH---HHHHHHHHHHHCCcEEecCCCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 999885432 467899999999999988767899999999999999999999998874
No 60
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=3.7e-60 Score=474.27 Aligned_cols=380 Identities=39% Similarity=0.677 Sum_probs=337.3
Q ss_pred CCCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCC
Q 012138 54 YHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYD 133 (470)
Q Consensus 54 ~~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 133 (470)
+.+.|+++++++|+++||.||++||||.+++++.++||+||+|.+++.++++++.+....+.++...+++++|++..+.+
T Consensus 10 ~~~~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~ 89 (389)
T PRK01278 10 YNRADLAFERGEGVWLIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSNLYRIPEQERLAERLVENSFAD 89 (389)
T ss_pred cCCCCceEEeeecCEEEECCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCccccccCChHHHHHHHHHHhhCCCC
Confidence 44678999999999999999999999999999999999999999999999998665544456788899999999988888
Q ss_pred eEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHH
Q 012138 134 MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITA 213 (470)
Q Consensus 134 ~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 213 (470)
++++++||++|++.|+++++.+... +| .+++..||+++++|||++..++.+++.+.+...+.+..+++..++|+|+++
T Consensus 90 ~v~~~~sGseA~~~al~~ar~~~~~-~G-~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 167 (389)
T PRK01278 90 KVFFTNSGAEAVECAIKTARRYHYG-KG-HPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEA 167 (389)
T ss_pred EEEEcCCcHHHHHHHHHHHHHHHHh-cC-CCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHH
Confidence 9999999999999999999875322 11 124568999999999999999988887666666666666777889999999
Q ss_pred HHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccc
Q 012138 214 LEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGK 293 (470)
Q Consensus 214 Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK 293 (470)
+++++++ ++++|++||++|++|.+.++++++++|+++|++||++||+||+|+|||++|++++++++++.||+++|||
T Consensus 168 l~~~l~~---~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK 244 (389)
T PRK01278 168 LKAAITP---NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDIMAVAK 244 (389)
T ss_pred HHHhhCC---CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCCEEEEeh
Confidence 9999975 8999999999999996666999999999999999999999999999999999887788899999999999
Q ss_pred cccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceE
Q 012138 294 ALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVK 373 (470)
Q Consensus 294 ~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~ 373 (470)
++++|+ |+|++++++++++.+....+++||++|+++++++.++|+.++++++.+++++++++++++|+++...+|..+.
T Consensus 245 ~l~~G~-~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 323 (389)
T PRK01278 245 GIGGGF-PLGACLATEEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGLVDRFPDVIE 323 (389)
T ss_pred hccCCc-ceEEEEEcHHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcee
Confidence 999998 9999999999999998878889999999999999999999987788999999999999999998766654677
Q ss_pred EEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 374 EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 374 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
.+++.|.++++++.. ++.+++++|+++||++.|++.+++||+||+.+++++|++++++|+++++ ++
T Consensus 324 ~v~g~G~~~~i~~~~-----~~~~~~~~l~~~GV~~~p~~~~~lR~~p~~~~~~~~i~~~l~~l~~~l~-~~ 389 (389)
T PRK01278 324 EVRGKGLLLGLKCVV-----PNRDLVQALRDEGLLTVGAGDNVVRLLPPLIITEEEIDEALERLERAAE-SL 389 (389)
T ss_pred eEecccEEEEEEEec-----CHHHHHHHHHHCCeEEeecCCCEEEEeCCcccCHHHHHHHHHHHHHHHH-hC
Confidence 889999999987743 4678999999999999998889999999999999999999999999987 53
No 61
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=100.00 E-value=5.2e-60 Score=474.58 Aligned_cols=400 Identities=60% Similarity=1.033 Sum_probs=352.3
Q ss_pred HHHHHHHhhhcccCCCCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcH
Q 012138 40 QQLINLEYEYSAHNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKF 119 (470)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~ 119 (470)
+++++..++|....+.+.|+++.+++|+++||.||++||||.+++++.++||+||+|.+++.++++++.+.+..+.++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~ 81 (401)
T TIGR01885 2 EEAIERENKYGAHNYHPLPVVFSKAEGVHVWDVEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSRAFYNDVF 81 (401)
T ss_pred hhHHHHHHHhhhcccCCCCceEEeeecCEEEeCCCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHH
Confidence 56777777777777777889999999999999999999999999999999999999999999999987766554567888
Q ss_pred HHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCC
Q 012138 120 PVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPL 199 (470)
Q Consensus 120 ~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 199 (470)
.+++++|+++++.+++++++||++|++.|+++++.+++.+++.++++..|+++..+|||++.+++++++.+.+...+.+.
T Consensus 82 ~~l~~~l~~~~~~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 161 (401)
T TIGR01885 82 GEFAEYVTKLFGYDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPY 161 (401)
T ss_pred HHHHHHHHhhcCCCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCC
Confidence 99999999999989999999999999999999998755444445567899999999999999999998776666666766
Q ss_pred CCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcccc
Q 012138 200 LPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS 279 (470)
Q Consensus 200 ~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~ 279 (470)
.++...++|+|+++||+++++.++++++|++||+++++|.+.|+.+|+++|+++|++||+++|+||+|+|||++|++++.
T Consensus 162 ~~~~~~~~~~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~ 241 (401)
T TIGR01885 162 VPGFKKIPYNNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCV 241 (401)
T ss_pred CCCceEeCCCCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHH
Confidence 67788899999999999998665689999999999999999988899999999999999999999999999999998877
Q ss_pred ccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q 012138 280 DWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQ 359 (470)
Q Consensus 280 ~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~ 359 (470)
+++++.||++++||++++|.+|+|++++++++++.+....+.+||+++|++++++.++|+.++++++.++++++++++++
T Consensus 242 ~~~~~~~di~~~gK~l~~g~~~ig~v~~~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~~~l~~~~~~~~~~~~~ 321 (401)
T TIGR01885 242 DHENVKPDIVLLGKALSGGVYPVSAVLADDDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEEEKLAENAEKLGEIFRD 321 (401)
T ss_pred hhcCCCCCEEEeeccccCCCCCcEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 77888999999999999774499999999999998876667789999999999999999999887888999999999999
Q ss_pred HHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHH
Q 012138 360 HLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHD 439 (470)
Q Consensus 360 ~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~ 439 (470)
.|+++.. +.+..+++.|+|+.+.++.+..+..+.+++++|.++||++.|..++.+||+|++.+|+++|++++++|++
T Consensus 322 ~L~~l~~---~~~~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~~~Gv~v~~~~~~~lRi~p~l~~t~~~i~~~l~~l~~ 398 (401)
T TIGR01885 322 QLKKLPK---PIITEVRGRGLLNAIVIDESKTGRTAWDLCLKLKEKGLLAKPTHGNIIRLAPPLVITEEQLDEGLEIIKK 398 (401)
T ss_pred HHHhccC---CceeEEeecCeeEEEEeccCcchhHHHHHHHHHHhCCEEEEecCCCEEEEeCCccCCHHHHHHHHHHHHH
Confidence 9998742 2567788999999998865421125688999999999999988889999999999999999999999998
Q ss_pred HHh
Q 012138 440 VLE 442 (470)
Q Consensus 440 ~l~ 442 (470)
+++
T Consensus 399 ~l~ 401 (401)
T TIGR01885 399 VID 401 (401)
T ss_pred HhC
Confidence 864
No 62
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=9.2e-60 Score=473.72 Aligned_cols=392 Identities=29% Similarity=0.467 Sum_probs=334.2
Q ss_pred CchHHHHHHHhhhcccC-------CC----CCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHH
Q 012138 37 SSSQQLINLEYEYSAHN-------YH----PVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAE 105 (470)
Q Consensus 37 ~~~~~~~~~~~~~~~~~-------~~----~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~ 105 (470)
++|.++.++.++++... +. +.|+++++++|+|+||.||++||||.+++++.++||+||+|.+++.+|++
T Consensus 4 ~~s~~~~~~a~~~~p~g~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~ 83 (428)
T PRK12389 4 TKSEALHQEALEHIVGGVNSPSRSYKAVGGGAPVVMERGKGAYFYDVDGNKYIDYLAAYGPIITGHAHPHITKAITEAAE 83 (428)
T ss_pred hhhHHHHHHHHhhCCCCCCCccccccccCCCCCeEEEeccCCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHH
Confidence 46788888888876432 21 46899999999999999999999999999999999999999999999999
Q ss_pred HccccCCCCCCCcHHHHHHHHhhhh-CCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchh
Q 012138 106 KLTLSSRAFYNDKFPVFAERLTSMF-GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAI 184 (470)
Q Consensus 106 ~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~ 184 (470)
++.+. .+.++...+++++|.+.. +.++++|++||+||++.|+|+++.| .|+..||.+.++|||++.+++
T Consensus 84 ~~~~~--~~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~--------tgr~~ii~~~~~yHG~t~~~~ 153 (428)
T PRK12389 84 NGVLY--GTPTELEIEFAKMLKEAIPSLEKVRFVNSGTEAVMTTIRVARAY--------TGRTKIIKFAGCYHGHSDLVL 153 (428)
T ss_pred hCCcc--CCCCHHHHHHHHHHHHhCCCCcEEEEeCCHHHHHHHHHHHHHHh--------hCCCEEEEECCCcCCChHHHH
Confidence 86543 356788899999999877 4689999999999999999999986 367799999999999999998
Q ss_pred cccCCcccc------cCCC-CCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhc
Q 012138 185 SMSCDNEAI------RGFG-PLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY 257 (470)
Q Consensus 185 ~~~~~~~~~------~~~~-~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~ 257 (470)
+.++....+ ..+. +..+++..+|++|+++++++++++++++++||+||+++.+|.+.|+++|+++|+++|++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~ 233 (428)
T PRK12389 154 VAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEA 233 (428)
T ss_pred HhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHc
Confidence 887643221 1122 223567888999999999999876678999999999999999999999999999999999
Q ss_pred CcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCc---CCccCCCCCCHHHHHHH
Q 012138 258 NILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP---GEHGSTFGGNPLASAVA 334 (470)
Q Consensus 258 gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~---~~~~~t~~~~~~~~aaa 334 (470)
|++||+||||+|| |+|.+++++++++.||+++++|+++||+ |+|++++++++++.+.+ ..+++||++||++|+++
T Consensus 234 g~llI~DEV~tG~-Rt~~~~a~~~~gv~PDivt~gK~lggG~-Pi~av~~~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaa 311 (428)
T PRK12389 234 GALVIYDEVITAF-RFMYGGAQDLLGVEPDLTALGKIIGGGL-PIGAYGGRKDIMEQVAPLGPAYQAGTMAGNPASMAAG 311 (428)
T ss_pred CCEEEEEcccccc-ccCcchhhHHhCCCCCeeeechhhcCCC-ceeEEeEHHHHHhhhccCCCcccccCCccCHHHHHHH
Confidence 9999999999999 9988888888999999999999999997 99999999999998853 35788999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEE-eccceeEEEEeccCCC----------chhHHHHHHHHH
Q 012138 335 IASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTAL----------PVSAYDICLKMK 403 (470)
Q Consensus 335 ~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~-~~~g~~~~~~~~~~~~----------~~~~~~~~~~l~ 403 (470)
.++|+.++++++.+++++++++|++.|+++..++| .+..+ ++.| ++.+++..+.. ......+.+.|+
T Consensus 312 la~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~~~~v~r~~g-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 389 (428)
T PRK12389 312 IACLEVLQQEGVYEKLDRLGAMLEEGILEAAEKHG-ITITINRLKG-ALTVYFTDEKVTNYDQAERSDGEAFGKFFKLML 389 (428)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEecCc-EEEEEEeCCCCCChhhhcccCHHHHHHHHHHHH
Confidence 99999999888999999999999999999988776 55555 6677 67777754220 012467888999
Q ss_pred HcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 404 ERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 404 ~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
++||++.+.+.+. +.||+.+|++||++++++++++++ ++
T Consensus 390 ~~Gv~~~~~~~~~--~~~~l~~t~e~id~~~~~l~~~l~-~~ 428 (428)
T PRK12389 390 NQGINLAPSKYEA--WFLTTAHTEEDIEETLEAVDRAFA-QL 428 (428)
T ss_pred HCCcEeecCCCCC--eeecCCCCHHHHHHHHHHHHHHHH-hC
Confidence 9999998764444 357899999999999999999997 53
No 63
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=100.00 E-value=2.9e-59 Score=469.87 Aligned_cols=398 Identities=50% Similarity=0.847 Sum_probs=350.8
Q ss_pred CchHHHHHHHhhhcccCCCCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCC
Q 012138 37 SSSQQLINLEYEYSAHNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYN 116 (470)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~ 116 (470)
..++++++....+....+.+.|+++++++|+|+||.||++||||.+++++.++||+||+|.+++.++++++.+.+..+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~~~~~ 82 (401)
T PRK00854 3 NTSEDLIATEQRLGAHNYKPLDVVLTRGEGVWVWDTDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRAFRN 82 (401)
T ss_pred CCCHHHHHHHhhhhhcccCCCCceEEeeeeCEEEECCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCC
Confidence 34677887776666666777899999999999999999999999999999999999999999999999998776655667
Q ss_pred CcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCC
Q 012138 117 DKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGF 196 (470)
Q Consensus 117 ~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 196 (470)
+...+++++|+++.+.+++++++||++|++.|+++++.++...+|.+++++.||++..+|||++..++.++.++..+..+
T Consensus 83 ~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~ 162 (401)
T PRK00854 83 DQLAPLYEELAALTGSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGF 162 (401)
T ss_pred HHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccC
Confidence 78899999999999889999999999999999999998654445555666789999999999999888888776666667
Q ss_pred CCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCc
Q 012138 197 GPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM 276 (470)
Q Consensus 197 ~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~ 276 (470)
.+..+++..++|+|+++|++++.+ ++++|++||++||+|.+.|+++|+++|+++|++||++||+||+|+|+|++|.+
T Consensus 163 ~~~~~~~~~~~~~d~~~le~~i~~---~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~ 239 (401)
T PRK00854 163 GPFTPGFRVVPFGDAEALEAAITP---NTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKL 239 (401)
T ss_pred CCCCCCeEEeCCCCHHHHHHHhCC---CeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchH
Confidence 777788889999999999999975 79999999999999999988999999999999999999999999999999987
Q ss_pred cccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 012138 277 LASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEE 356 (470)
Q Consensus 277 ~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~ 356 (470)
++.+++++.||++++||++++|++|+|++++++++++.+....++.+|+++++.++++.++|+.++++++.+++++++++
T Consensus 240 ~~~~~~g~~~D~~~~~K~l~gg~~~ig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~~~~~~~~~~~~~~ 319 (401)
T PRK00854 240 LAEEHEGIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLKPGQHGSTFGGNPLACAVARAALKVLTEEGMIENAAEMGAY 319 (401)
T ss_pred hHHhhcCCCCCEEEecccccCCccCeEEEEEcHHHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 77777899999999999999885599999999999999887778889999999999999999998877789999999999
Q ss_pred HHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHH
Q 012138 357 LRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKA 436 (470)
Q Consensus 357 l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~ 436 (470)
+.+.|+++... .+..+++.|.++.+.+..+. ....++++.|+++||++.+...+++||+|++.+|+++|++++++
T Consensus 320 l~~~L~~~~~~---~~~~~~g~g~~~~i~~~~~~--~~~~~~~~~L~~~GV~v~~~~~~~lR~~p~~~~t~e~i~~~i~~ 394 (401)
T PRK00854 320 FLEGLRSIRSN---IVREVRGRGLMLAVELEPEA--GGARQYCEALKERGLLAKDTHDHTIRLAPPLVITREQVDWALEQ 394 (401)
T ss_pred HHHHHHhhccC---ceEEEeccceEEEEEEecCc--hhHHHHHHHHHHCCeEEecCCCCEEEEeCCcccCHHHHHHHHHH
Confidence 99999887432 35567899999998774432 25678999999999999877678999999999999999999999
Q ss_pred HHHHHh
Q 012138 437 LHDVLE 442 (470)
Q Consensus 437 l~~~l~ 442 (470)
|++++.
T Consensus 395 l~~~l~ 400 (401)
T PRK00854 395 IAKVLA 400 (401)
T ss_pred HHHHhh
Confidence 999875
No 64
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=100.00 E-value=6.8e-59 Score=468.14 Aligned_cols=394 Identities=24% Similarity=0.385 Sum_probs=324.0
Q ss_pred CCchHHHHHHHhhhcccC-------CC---CCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHH
Q 012138 36 SSSSQQLINLEYEYSAHN-------YH---PVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAE 105 (470)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~-------~~---~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~ 105 (470)
.++|++++++.++++... +. +.|+++++++|+|+||.||++||||.+++++.++||+||+|.+++.++++
T Consensus 50 ~~~S~~l~~ra~~~~pgGv~~~~r~~~~~~~~p~~~~~a~G~~l~D~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~ 129 (474)
T PLN02482 50 TTKSEEIFKAAKELMPGGVNSPVRAFKSVGGQPIVFDRVKGSYAWDVDGNEYIDYVGSWGPAIIGHADDEVLAALAETMK 129 (474)
T ss_pred ChHHHHHHHHHHhhCCCCCCCcchhhcccCCCCeeEEEeeeCEEEECCCCEEEEecccccccccCCCCHHHHHHHHHHHh
Confidence 457899999999987432 22 45899999999999999999999999999999999999999999999999
Q ss_pred HccccCCCCCCCcHHHHHHHHhhhh-CCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchh
Q 012138 106 KLTLSSRAFYNDKFPVFAERLTSMF-GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAI 184 (470)
Q Consensus 106 ~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~ 184 (470)
++... ...++...+++++|++.. +.++++|+|||+||++.|+|+++.+ +|+.+||.+.++|||++....
T Consensus 130 ~~~~~--~~~~~~~~~lAe~l~~~~p~~~~v~f~~SGsEA~e~AlklAR~~--------tgr~~Ii~~~g~YHG~~~~~~ 199 (474)
T PLN02482 130 KGTSF--GAPCLLENVLAEMVIDAVPSVEMVRFVNSGTEACMGVLRLARAY--------TGREKIIKFEGCYHGHADSFL 199 (474)
T ss_pred hCCCC--CCCCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHh--------cCCCEEEEECCccCCCcchhh
Confidence 87643 345677889999999887 4789999999999999999999986 367799999999999874432
Q ss_pred cc--cCCcccccCCCCC-----CCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhc
Q 012138 185 SM--SCDNEAIRGFGPL-----LPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY 257 (470)
Q Consensus 185 ~~--~~~~~~~~~~~~~-----~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~ 257 (470)
.. ++......+..+. .+++..+||||+++|+++++++++++++||+||+++.+|.+.|+++|+++|+++|++|
T Consensus 200 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~ 279 (474)
T PLN02482 200 VKAGSGVATLGLPDSPGVPKAATSATLTAPYNDLEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKEN 279 (474)
T ss_pred hhcCCCccccCCCCCCCCCCCCCCCeEEecCCChHHHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHc
Confidence 22 2111111111111 1246788999999999999876678999999999999999999999999999999999
Q ss_pred CcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCc---CCccCCCCCCHHHHHHH
Q 012138 258 NILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP---GEHGSTFGGNPLASAVA 334 (470)
Q Consensus 258 gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~---~~~~~t~~~~~~~~aaa 334 (470)
|++||+||||+|| |+|.+++.+++++.||+++|+|+++||+ |+|++++++++++.+.+ ..+++||++||++++++
T Consensus 280 g~lLI~DEV~tGf-R~g~~ga~~~~gv~PDi~t~gK~lggG~-Pigav~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAa 357 (474)
T PLN02482 280 GALLVFDEVMTGF-RIAYGGAQEYFGITPDLTTLGKVIGGGL-PVGAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAG 357 (474)
T ss_pred CCEEEEeccccCe-ecCcchHhHHhCCCCCEEEecchhhCCC-ceEEEEEcHHHHHhhccCCCcccccCcchhHHHHHHH
Confidence 9999999999999 9998888899999999999999999997 99999999999998863 35788999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC----------chhHHHHHHHHHH
Q 012138 335 IASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL----------PVSAYDICLKMKE 404 (470)
Q Consensus 335 ~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~----------~~~~~~~~~~l~~ 404 (470)
.++|+.++++++.+++++++++|+++|+++..+++ ....+...+.++.+++..+.. ......+.+.|++
T Consensus 358 la~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~g-~~~~~~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~ 436 (474)
T PLN02482 358 IHTLKRLQQPGTYEYLDKITKKLIQGILEAGKKAG-HEMCGGYISGMFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLE 436 (474)
T ss_pred HHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEcccceEEEEEEecCCccChhhhccCCHHHHHHHHHHHHH
Confidence 99999998888999999999999999999877643 111112323366776643210 1124578889999
Q ss_pred cCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 405 RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 405 ~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
+||++.+..... + .||+.+|++||+++++++++++. ++
T Consensus 437 ~Gv~~~~~~~~~-~-~psl~ht~~dId~~l~al~~~l~-~~ 474 (474)
T PLN02482 437 EGVYLAPSQFEA-G-FTSLAHTEEDIDFTIAAAERVLA-RI 474 (474)
T ss_pred CCeEEeccCCCC-C-cCCCCCCHHHHHHHHHHHHHHHH-hC
Confidence 999998753322 2 38899999999999999999987 53
No 65
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=1.3e-58 Score=442.02 Aligned_cols=394 Identities=27% Similarity=0.432 Sum_probs=332.6
Q ss_pred CchHHHHHHHhhhcccC-------CCC---CceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHH
Q 012138 37 SSSQQLINLEYEYSAHN-------YHP---VPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEK 106 (470)
Q Consensus 37 ~~~~~~~~~~~~~~~~~-------~~~---~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~ 106 (470)
++|+++.++.++++... +.+ .|+++++++|+++||+||++||||..+|++..+||+||.|.+|+.+++++
T Consensus 5 ~~S~~l~~~A~~~~pGGvnspvra~~~v~~~P~fi~~g~Ga~l~DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~ 84 (432)
T COG0001 5 PKSEALFERAKKVIPGGVNSPVRAFKSVGGYPIFIERGKGAYLTDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLER 84 (432)
T ss_pred cchHHHHHHHhhhCCCCCCccccccCCCCCCCeeEEeccCCeEEeCCCCEeeehhccCcccccCCCCHHHHHHHHHHHHh
Confidence 56899999999987532 222 79999999999999999999999999999999999999999999999998
Q ss_pred ccccCCCCCCCcHHHHHHHHhhhhCC-CeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhc
Q 012138 107 LTLSSRAFYNDKFPVFAERLTSMFGY-DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAIS 185 (470)
Q Consensus 107 ~~~~~~~~~~~~~~~l~~~l~~~~~~-~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~ 185 (470)
.... ..+++...++++.+.++++. ++|-|+||||||++.|++++|.+ .|+++|+.|+++|||+....+.
T Consensus 85 G~~f--g~Pte~Ei~~Aell~~~~p~~e~vrfvnSGTEAtmsAiRlARa~--------TgR~kIikF~G~YHG~~D~~lv 154 (432)
T COG0001 85 GLSF--GAPTELEVELAELLIERVPSIEKVRFVNSGTEATMSAIRLARAY--------TGRDKIIKFEGCYHGHSDSLLV 154 (432)
T ss_pred cCCC--CCCCHHHHHHHHHHHHhcCcccEEEEecchhHHHHHHHHHHHHh--------hCCCeEEEEcCCCCCCccHHHh
Confidence 7533 24677788999999999875 99999999999999999999986 3788999999999999877654
Q ss_pred ccCCc--ccccCCCC-----CCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcC
Q 012138 186 MSCDN--EAIRGFGP-----LLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN 258 (470)
Q Consensus 186 ~~~~~--~~~~~~~~-----~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~g 258 (470)
-.+.. ....+-.+ ....+..+||||++++++++++.++++++||+||+.+..|.+.|.++|+++|+++|++||
T Consensus 155 ~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G 234 (432)
T COG0001 155 KAGSGAATLGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHG 234 (432)
T ss_pred hcCcCcccCCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcC
Confidence 32211 01101111 112378999999999999999988999999999999999999999999999999999999
Q ss_pred cEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcC---CccCCCCCCHHHHHHHH
Q 012138 259 ILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG---EHGSTFGGNPLASAVAI 335 (470)
Q Consensus 259 illI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~---~~~~t~~~~~~~~aaa~ 335 (470)
++||.|||.+|| |.....+.+.+++.||+.+|+|.++||+ |+|++.+++++|+.+.+. .+.+|+++||++++|+.
T Consensus 235 ~lLI~DEViTGF-R~~~gGaq~~~gi~PDlttlGKiIGGGl-P~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~ 312 (432)
T COG0001 235 ALLIFDEVITGF-RVALGGAQGYYGVEPDLTTLGKIIGGGL-PIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGL 312 (432)
T ss_pred cEEEEecchhhc-ccCCcccccccCcCcchhhhhhhhcCCc-ceeeeccHHHHHhhhCCCCCccccCCCCCcHHHHHHHH
Confidence 999999999999 6665667889999999999999999999 999999999999987653 57889999999999999
Q ss_pred HHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC----------chhHHHHHHHHHH
Q 012138 336 ASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL----------PVSAYDICLKMKE 404 (470)
Q Consensus 336 a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~----------~~~~~~~~~~l~~ 404 (470)
++|+.+.+ +...+++.+++++|++.|++...++. ....+...|.++.+.+..... ......+...|++
T Consensus 313 atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g-~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~ 391 (432)
T COG0001 313 ATLEELMTEEGVYERLDALGERLAEGLRAAAERHG-IPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLN 391 (432)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHh
Confidence 99999987 55899999999999999999887763 455677888888887765321 1123456668999
Q ss_pred cCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccC
Q 012138 405 RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 405 ~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
+||++.|..-...=+| ..||+++|++.+++++++++ ++.
T Consensus 392 ~GV~l~ps~~ea~flS--~ahte~di~~~~~a~~~~~~-~~~ 430 (432)
T COG0001 392 RGVYLAPSQFEAGFLS--TAHTEEDIDRTLEAADEAFK-ELA 430 (432)
T ss_pred CCcccCCccccceeee--cccCHHHHHHHHHHHHHHHH-Hhh
Confidence 9999999864444455 78999999999999999998 654
No 66
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=100.00 E-value=1.5e-58 Score=464.12 Aligned_cols=385 Identities=34% Similarity=0.577 Sum_probs=336.3
Q ss_pred cCCCCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhC
Q 012138 52 HNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFG 131 (470)
Q Consensus 52 ~~~~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 131 (470)
..+.+.|+++.+++|+++||.||++||||.+++++.++||+||+|.+++.++++++......+.++...+++++|+++.+
T Consensus 17 ~~~~~~~~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 96 (403)
T PRK05093 17 PNYAPAEFIPVRGEGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISNVFTNEPALRLAKKLIDATF 96 (403)
T ss_pred hhcCCCCeeEEEeecCEEEeCCCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHhhCC
Confidence 33567899999999999999999999999999999999999999999999999876544333456677899999999888
Q ss_pred CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCH
Q 012138 132 YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDI 211 (470)
Q Consensus 132 ~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (470)
.++++|++||++|++.|+++++.++...++ .++..||+++.+|||++..++++++.+.+...+.+...++..++|||+
T Consensus 97 ~~~~~~~~sGseA~e~a~klar~~~~~~~~--~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 174 (403)
T PRK05093 97 AERVFFANSGAEANEAAFKLARRYACDRHG--PEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFNDL 174 (403)
T ss_pred CCEEEEeCchHHHHHHHHHHHHHHHhhcCC--CCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCCCH
Confidence 889999999999999999999886432211 356789999999999999888887766555666666667889999999
Q ss_pred HHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeec
Q 012138 212 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVIL 291 (470)
Q Consensus 212 ~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~ 291 (470)
+++++.+.+ ++++|++||+++++|.+.|+++++++|+++|++||+++|+||+|+||+++|++++++++++.||+.+|
T Consensus 175 ~~l~~~l~~---~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~s~ 251 (403)
T PRK05093 175 AAVKAVIDD---HTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPDILTS 251 (403)
T ss_pred HHHHHHhcC---CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCCEEEe
Confidence 999999864 79999999988888988789999999999999999999999999999999988777788999999999
Q ss_pred cccccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCc
Q 012138 292 GKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNY 371 (470)
Q Consensus 292 sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~ 371 (470)
||++++|+ |+|++++++++++.+....+..+++++++.++++.++|+.+.++++.++++++++++.+.|+++...++ .
T Consensus 252 sK~l~~G~-rig~vv~~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~ 329 (403)
T PRK05093 252 AKALGGGF-PIGAMLTTAEIASHFKVGTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGLQKINQKYG-V 329 (403)
T ss_pred cccccCCc-ceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCC-C
Confidence 99999998 999999999999999876778899999999999999999988788999999999999999999876554 5
Q ss_pred eEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 372 VKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 372 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
+..+++.|.++++.++... .....++++.|+++||++.+.+.+++||+|++.+++++|++++++|.+++. ++
T Consensus 330 ~~~~~~~G~~~~~~l~~~~-~~~~~~~~~~l~~~Gv~v~~~g~~~lRl~~~~~~~~~~i~~~~~~l~~~l~-~~ 401 (403)
T PRK05093 330 FSEIRGMGLLIGAELKPQY-KGRARDFLNAAAEEGVMVLVAGPDVLRFAPSLVIEEADIDEGLARFEKAVA-KV 401 (403)
T ss_pred eEeEeeCceEEEEEecCcc-hhHHHHHHHHHHHCCeEEecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH-Hh
Confidence 6678889999999875421 014678999999999999987778999999999999999999999999987 53
No 67
>PRK08297 L-lysine aminotransferase; Provisional
Probab=100.00 E-value=2.9e-59 Score=470.26 Aligned_cols=396 Identities=26% Similarity=0.433 Sum_probs=320.1
Q ss_pred HHHHHHhhhcccCCCCCceEEEeecCCEEEeC-CCCeEEeccCCcccccCCCCCHHHHH--HHHHHHHHccc--cC-CCC
Q 012138 41 QLINLEYEYSAHNYHPVPIVFSQAKGSSIWDP-EGNKYLDFLSAYSAVNQGHCHPKIMK--ALQEQAEKLTL--SS-RAF 114 (470)
Q Consensus 41 ~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~d~-~G~~~lD~~~~~~~~~lG~~~p~v~~--a~~~~~~~~~~--~~-~~~ 114 (470)
++.+...++....-.|+++++++++|+|+||. ||++||||.+++++.++||+||+|.+ ++.+|++++.+ .. ..+
T Consensus 10 ~~~~~~~~~~~~~~~p~~~~i~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~ 89 (443)
T PRK08297 10 DVHEVLARHILVDGFDLVLDLERSQGSYLVDARTGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDV 89 (443)
T ss_pred chhHHHHHHHhhcCCCcceEEEeccCCEEEECCCCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCc
Confidence 34444444443332355666899999999995 99999999999999999999999999 99999987653 22 235
Q ss_pred CCCcHHHHHHHHhhhh---CCCeEEecCChhHHHHHHHHHHHHhchh---cccC-CCCCcEEEEEccCccccccchhccc
Q 012138 115 YNDKFPVFAERLTSMF---GYDMVLPMNTGAEGVETALKLARKWGYV---KKKF-SIDEAIIVSCCGCFHGRTLAAISMS 187 (470)
Q Consensus 115 ~~~~~~~l~~~l~~~~---~~~~v~~~~sGteA~~~al~~~~~~~~~---~~~~-~~g~~~ii~~~~~yhg~~~~~~~~~ 187 (470)
.++...+++++|+++. +.++|+|+|||+||++.|+|+++.|+.. .+|. ++++.+||++.++|||++.++++++
T Consensus 90 ~~~~~~~la~~l~~~~~p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~ 169 (443)
T PRK08297 90 YTVEMARFVDTFARVLGDPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLT 169 (443)
T ss_pred CCHHHHHHHHHHHhhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhc
Confidence 6778889999998876 3579999999999999999999986421 1233 1346789999999999999999988
Q ss_pred CCcccccCCCCCC-------CCe------------eeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHH
Q 012138 188 CDNEAIRGFGPLL-------PGH------------LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLK 248 (470)
Q Consensus 188 ~~~~~~~~~~~~~-------~~~------------~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~ 248 (470)
+.+.....+.+.. +.. ..+++++++++++++.++++++++||+||+++.+|.+.|+++|++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~ 249 (443)
T PRK08297 170 NTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFA 249 (443)
T ss_pred CCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHH
Confidence 6432222211111 111 011122456778888776679999999999999999999999999
Q ss_pred HHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhh----cC-cCCccCC
Q 012138 249 AVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLC----IQ-PGEHGST 323 (470)
Q Consensus 249 ~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~----~~-~~~~~~t 323 (470)
+|+++|++||++||+||||+||||+|++|+++++++.||+++|||++. +|+++..+++.+. +. ...+++|
T Consensus 250 ~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~-----~~a~l~~~~i~~~~~~~~~~~~~~~~T 324 (443)
T PRK08297 250 AMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVAFGKKTQ-----VCGIMAGRRVDEVEDNVFAVSSRINST 324 (443)
T ss_pred HHHHHHHHcCCEEEEechhhccCccchHHHHHhcCCCCCEEEeccccc-----ccceecchHHHHhhhhhccCccccCCC
Confidence 999999999999999999999999999999999999999999999974 3345555554332 21 2358899
Q ss_pred CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHH
Q 012138 324 FGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK 403 (470)
Q Consensus 324 ~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~ 403 (470)
|++||++|+++.++|+.++++++.++++++++++++.|+++..++|.....+++.|+|+.+++.... ....+++.|+
T Consensus 325 ~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~~~i~~~~~~---~~~~~~~~l~ 401 (443)
T PRK08297 325 WGGNLVDMVRARRILEVIEEDGLVENAARQGEYLLARLEELAAEFPAVVSNVRGRGLMCAFDLPTTA---DRDEVIRRLW 401 (443)
T ss_pred CCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeeccceEEEEEecCHH---HHHHHHHHHH
Confidence 9999999999999999999889999999999999999999988876333489999999999986432 5678999999
Q ss_pred HcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 404 ERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 404 ~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
++||++.|.+.+.+||+||+.+|++||++++++|.+++. ++
T Consensus 402 ~~Gvl~~~~~~~~lr~~P~l~~t~~eid~~l~~l~~~l~-~~ 442 (443)
T PRK08297 402 EEGVLVLPCGERSIRFRPALTVTTEEIDAAIDALRRALP-EV 442 (443)
T ss_pred HCCEEEecCCCCeEEEECCccCCHHHHHHHHHHHHHHHH-hh
Confidence 999999987778999999999999999999999999998 64
No 68
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=4.4e-58 Score=460.86 Aligned_cols=387 Identities=36% Similarity=0.615 Sum_probs=340.0
Q ss_pred hHHHHHHHhhhcccCCCCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCc
Q 012138 39 SQQLINLEYEYSAHNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDK 118 (470)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~ 118 (470)
.++..+...++....+.+.|+++++++|+++||.||++||||.+++++.++||+||++.+++.+++++..+....+.++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~d~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~ 86 (398)
T PRK03244 7 TAELLQRWQAVMMNNYGTPPLALVRGEGAVVWDVDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFATEP 86 (398)
T ss_pred HHHHHHHHHHHhhhhccCCCceEEEeeecEEEECCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCccCCHH
Confidence 34455555555555566678999999999999999999999999999999999999999999999998765444456667
Q ss_pred HHHHHHHHhhhhCC---CeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccC
Q 012138 119 FPVFAERLTSMFGY---DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRG 195 (470)
Q Consensus 119 ~~~l~~~l~~~~~~---~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~ 195 (470)
..+++++|++.++. +++++++||++|++.|+++++. ++++.||.++++|||++..++.+++.......
T Consensus 87 ~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~---------~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~ 157 (398)
T PRK03244 87 QIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARL---------TGRTKIVAAEGGFHGRTMGALALTGQPAKRAP 157 (398)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHH---------HCCCeEEEECCCcCCccHHHHhccCCcccccC
Confidence 78999999998763 5899999999999999998887 35668889999999999999888776555566
Q ss_pred CCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCC
Q 012138 196 FGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR 275 (470)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~ 275 (470)
+.+..+++..+|++|++++++++.+ ++++|++||++||+|.++|+++|+++|+++|++||++||+||+|+|||++|+
T Consensus 158 ~~~~~~~~~~~~~~d~~~l~~~~~~---~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~ 234 (398)
T PRK03244 158 FEPLPGGVEHVPYGDVDALAAAVDD---DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGA 234 (398)
T ss_pred CCCCCCCceEeCCCCHHHHHHhhcC---CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccch
Confidence 6666667788899999999998854 7999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 012138 276 MLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGE 355 (470)
Q Consensus 276 ~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~ 355 (470)
+++++++++.||+++|||++++|+ |+|++++++++++.+....+.++|++++++++++.++|+.++++++.++++++++
T Consensus 235 ~~~~~~~~~~pDi~t~sK~l~~G~-~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~ 313 (398)
T PRK03244 235 WFAHQHDGVTPDVVTLAKGLGGGL-PIGACLAFGPAADLLTPGLHGSTFGGNPVACAAALAVLDTIASEGLLENAERLGE 313 (398)
T ss_pred HHhhhhhCCCCCEEEEchhhhCCc-ccEEEEEcHHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 877788899999999999999997 9999999999999988777889999999999999999999888889999999999
Q ss_pred HHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHH
Q 012138 356 ELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSK 435 (470)
Q Consensus 356 ~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~ 435 (470)
++++.|+++. +| .+..+++.|.+++++++.. .+..++++|+++||++.+...+++||+|++.+|++||+++++
T Consensus 314 ~l~~~L~~~~--~~-~~~~v~g~g~~~~i~~~~~----~~~~~~~~l~~~Gv~~~~~~~~~iR~~p~~~~t~~~i~~~~~ 386 (398)
T PRK03244 314 QLRAGIEALG--HP-LVDHVRGRGLLLGIVLTAP----VAKAVEAAAREAGFLVNAVAPDVIRLAPPLIITDAQVDAFVA 386 (398)
T ss_pred HHHHHHHhcC--CC-ceeeEeeccEEEEEEEecc----HHHHHHHHHHHCCeEEeecCCCEEEEECCCcCCHHHHHHHHH
Confidence 9999998863 33 5677889999999988532 567899999999999988777999999999999999999999
Q ss_pred HHHHHHhcccC
Q 012138 436 ALHDVLELDLP 446 (470)
Q Consensus 436 ~l~~~l~~~~~ 446 (470)
+|++++. +++
T Consensus 387 ~l~~~l~-~~~ 396 (398)
T PRK03244 387 ALPAILD-AAA 396 (398)
T ss_pred HHHHHHH-hcc
Confidence 9999998 654
No 69
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=100.00 E-value=5.1e-58 Score=460.10 Aligned_cols=396 Identities=30% Similarity=0.493 Sum_probs=331.7
Q ss_pred hHHHHHHHhhhcccCC----CCC-ceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCC-
Q 012138 39 SQQLINLEYEYSAHNY----HPV-PIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSR- 112 (470)
Q Consensus 39 ~~~~~~~~~~~~~~~~----~~~-p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~- 112 (470)
.+++++.+.++.++.+ .+. ++.+++++|+++||.||++||||.+++++.++||+||+|.+++.++++++.+...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~ 83 (427)
T TIGR00508 4 TASLLAFDQRHIWHPYTSMSSPLPVYPVESADGVELTLDDGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMFG 83 (427)
T ss_pred hHHHHhccccccccCccCccccCCCceEEeeeeeEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccc
Confidence 4556665555544322 123 4668999999999999999999999999999999999999999999998765433
Q ss_pred CCCCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCc
Q 012138 113 AFYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDN 190 (470)
Q Consensus 113 ~~~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~ 190 (470)
.+.++...+++++|++..+ .++++|++||+||++.|+++++.++.. ++ .+++..||++.++|||.+..+.++++..
T Consensus 84 ~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~-~~-~~~r~~il~~~~~yHG~t~~~~s~~~~~ 161 (427)
T TIGR00508 84 GFTHKPAIELCQKLVKMTPNALDCVFLADSGSVAVEVALKMALQYWQA-KG-EKNRQKFLTIRSGYHGDTFGAMSVCDPE 161 (427)
T ss_pred ccCCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHh-hC-CCCccEEEEEcCCcCCccHhhhcccCCc
Confidence 3467778899999999874 579999999999999999999986422 11 1356789999999999999998887642
Q ss_pred -ccccCCCCCCCCeeeec---------C--CCHHHHHHHHHhcCCCeEEEEEccc-cCCCccccCChhhHHHHHHHHHhc
Q 012138 191 -EAIRGFGPLLPGHLKVD---------F--GDITALEKIFKESGDQIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCSKY 257 (470)
Q Consensus 191 -~~~~~~~~~~~~~~~~~---------~--~d~~~Le~~l~~~~~~~~~vi~epi-~n~~G~~~~~~~~l~~l~~l~~~~ 257 (470)
..+..|.+..++....+ + +|+++++++++.+++++++||+||+ ++.+|.+.++++|+++|+++|++|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~ 241 (427)
T TIGR00508 162 NSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQY 241 (427)
T ss_pred ccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHc
Confidence 23333444333322221 1 2577888888766668999999997 899999999999999999999999
Q ss_pred CcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcC-----CccCCCCCCHHHHH
Q 012138 258 NILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG-----EHGSTFGGNPLASA 332 (470)
Q Consensus 258 gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~-----~~~~t~~~~~~~~a 332 (470)
|++||+||||+|||++|++|+++++++.||++++||+++||++|++++++++++++.+... .+++||++||++++
T Consensus 242 ~~llI~DEv~tG~Gr~G~~~~~~~~~v~pDi~~~gK~l~gG~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~a 321 (427)
T TIGR00508 242 DILLIADEIATGFGRTGKLFACEHAGVVPDILCVGKALTGGYMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLACA 321 (427)
T ss_pred CCEEEEeccccCCCcCCccchhhhcCCCCCEEEechhhhcCcccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHHH
Confidence 9999999999999999999999999999999999999999977999999999999988643 37789999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccC
Q 012138 333 VAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT 412 (470)
Q Consensus 333 aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~ 412 (470)
++.++|+.++++++.+++++++++|+++|+++.. +| .+..+++.|+++.+++..+. ....+.++|+++||++.+.
T Consensus 322 aa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~-~~-~i~~vrg~G~~~~i~~~~~~---~~~~~~~~l~~~Gv~~~~~ 396 (427)
T TIGR00508 322 VAEASLAILLEGEWQKQVSAIENQLKRELSPLRK-NP-VVKDVRVLGAIGVVEMYKPV---NVEELQKKFVEQGVWIRPF 396 (427)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhc-CC-CEEeEeccccEEEEEECCcc---CHHHHHHHHHHCCeEEEec
Confidence 9999999999888999999999999999999864 43 57789999999999986543 5678999999999999876
Q ss_pred CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 413 HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 413 ~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
.+.+||+||+++|++||++++++|+++++
T Consensus 397 -~~~l~~~ppl~~t~~~id~~~~~l~~~l~ 425 (427)
T TIGR00508 397 -GKLIYVMPPYIITTEQLQKLTAALIEALH 425 (427)
T ss_pred -CCEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 46899999999999999999999999997
No 70
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=8.1e-58 Score=456.96 Aligned_cols=392 Identities=27% Similarity=0.451 Sum_probs=328.6
Q ss_pred CCchHHHHHHHhhhcccC-------CC---CCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHH
Q 012138 36 SSSSQQLINLEYEYSAHN-------YH---PVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAE 105 (470)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~-------~~---~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~ 105 (470)
.+++.++.++.++++... +. +.|+++++++|+++||.||++||||.+++++.++||+||+|.+++.++++
T Consensus 4 ~~~s~~l~~~a~~~~p~g~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~ 83 (433)
T PRK00615 4 IQEMTHTFSEACQYFPGGVNSPVRACRSVGITPPIVSSASGDIFIDSLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAE 83 (433)
T ss_pred cHHHHHHHHHHHhhCCCCcCCCcccccccCCCCceEEEeeeCEEEECCCCEEEEcccchhccccCCCCHHHHHHHHHHHH
Confidence 356788888888876432 32 47899999999999999999999999999999999999999999999998
Q ss_pred HccccCCCCCCCcHHHHHHHHhhhhCC--CeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccc---
Q 012138 106 KLTLSSRAFYNDKFPVFAERLTSMFGY--DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRT--- 180 (470)
Q Consensus 106 ~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~--- 180 (470)
+... ..+.++...+++++|.+..+. ++++|++||+||++.|+|+++.+ +|+..|+.+.++|||++
T Consensus 84 ~~~~--~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~--------tgr~~ii~~~~~yHG~td~~ 153 (433)
T PRK00615 84 RGTS--YGLTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGI--------TGRSIIIKFLGCYHGHADTL 153 (433)
T ss_pred hCCC--CCCCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHh--------hCCCEEEEEcCccCCCCccc
Confidence 8653 235677789999999998753 69999999999999999999986 36779999999999988
Q ss_pred cchhcccCCccc--ccCC--CCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHh
Q 012138 181 LAAISMSCDNEA--IRGF--GPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK 256 (470)
Q Consensus 181 ~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~ 256 (470)
..++++++.... ...+ .+..+....++|||++++++++.++++++++||+||+++++|.+.|+++|+++|+++|++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~ 233 (433)
T PRK00615 154 LQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRR 233 (433)
T ss_pred CcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHH
Confidence 666666543211 1111 122234567789999999999987666899999999999999999999999999999999
Q ss_pred cCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcC---CccCCCCCCHHHHHH
Q 012138 257 YNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG---EHGSTFGGNPLASAV 333 (470)
Q Consensus 257 ~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~---~~~~t~~~~~~~~aa 333 (470)
||+++|+||||+|| |+|.+++++++++.||+++|||+++||+ |+|++++++++++.+.+. .+++||+++|++|++
T Consensus 234 ~g~llI~DEv~tG~-R~G~~ga~~~~gv~PDi~~~gK~lggG~-p~~av~~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa 311 (433)
T PRK00615 234 TGSLSIMDEVVTGF-RVAQGGAAAIYHVKPDITVYGKILGGGL-PAAAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAA 311 (433)
T ss_pred cCCEEEEEcccccc-cccHhHHHHhcCCCCCeEEEcccccCCc-ceeeeeecHHHHhhhcCCCCcccCCCCcccHHHHHH
Confidence 99999999999999 8999888899999999999999999997 999999999999988532 367899999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhh--CCCceEEEeccceeEEEEeccCCC----------chhHHHHHHH
Q 012138 334 AIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQ--FPNYVKEVRGRGLFNAVEFDKTAL----------PVSAYDICLK 401 (470)
Q Consensus 334 a~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~--~p~~~~~~~~~g~~~~~~~~~~~~----------~~~~~~~~~~ 401 (470)
+.++|+.++++++.+++++++++|+++|+++..+ +| +..++ .|+++.+++..+.. ......+.+.
T Consensus 312 ~la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~g~~--v~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (433)
T PRK00615 312 GKASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQGFP--VSLVR-YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQS 388 (433)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHcCCC--eEEEe-eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHH
Confidence 9999999988889999999999999999987665 33 66667 89999999964321 0124578899
Q ss_pred HHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 402 MKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 402 l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
|.++||++.+...... .++..+|++||++++++++++++ ++
T Consensus 389 l~~~Gv~~~~~~~~~~--~ls~~ht~~did~~~~a~~~~~~-~~ 429 (433)
T PRK00615 389 AFSKGVYLSPSPFEAS--FLSSAHSMENLDYAQNVLIDSLE-KV 429 (433)
T ss_pred HHHCCeeecCcccccc--ceecCCCHHHHHHHHHHHHHHHH-HH
Confidence 9999999987643222 23478999999999999999998 65
No 71
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=100.00 E-value=8.9e-58 Score=459.26 Aligned_cols=393 Identities=57% Similarity=1.007 Sum_probs=344.4
Q ss_pred hcccCCCCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhh
Q 012138 49 YSAHNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTS 128 (470)
Q Consensus 49 ~~~~~~~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 128 (470)
+....+.+.|+++++++|+++||.||++||||.+++++.++||+||+|.+++.++++.+.+.+..+.++...++++.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~G~~~~d~dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (400)
T PTZ00125 5 YGAHNYHPLPVVLKRGKGVFVWDVEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSRAFYNDVLGLAEKYITD 84 (400)
T ss_pred ccccccCCCCccEEeeecCEEEeCCCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHh
Confidence 44556677899999999999999999999999999999999999999999999999988776655556677889999999
Q ss_pred hhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecC
Q 012138 129 MFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF 208 (470)
Q Consensus 129 ~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (470)
+.+.++++|++||++|++.|+++++.++.++++.+.+++.|++++.+|||++...+..+........+.+..++...+++
T Consensus 85 ~~~~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (400)
T PTZ00125 85 LFGYDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDY 164 (400)
T ss_pred CCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCC
Confidence 88889999999999999999999987766666555566789999999999999998887765555556666667778899
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcce
Q 012138 209 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 288 (470)
Q Consensus 209 ~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi 288 (470)
+|+++||++++. +++++|++||++||+|.+.|+++|+++|.++|++||++||+||+|+|+|++|.++..+.+++.||+
T Consensus 165 ~d~~~le~~l~~--~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~ 242 (400)
T PTZ00125 165 NDVEALEKLLQD--PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDI 242 (400)
T ss_pred CCHHHHHHHhCC--CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCE
Confidence 999999999962 379999999999999999988999999999999999999999999999999988777778899999
Q ss_pred eeccccccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhC
Q 012138 289 VILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQF 368 (470)
Q Consensus 289 ~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~ 368 (470)
+++||++++|+.|+|++++++++++.+....+..+++++++.++++.++|+.++++++.++.+++++++++.|+++...+
T Consensus 243 ~~~sK~l~~g~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~~~~~~~~~~~~~l~~~l~~l~~~~ 322 (400)
T PTZ00125 243 VLLGKALSGGLYPISAVLANDDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEEKLAENAQRLGEVFRDGLKELLKKS 322 (400)
T ss_pred EEEcccccCCCcCcEEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999885599999999999999877677889999999999999999998877889999999999999998875544
Q ss_pred CCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccC
Q 012138 369 PNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 369 p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
+ .+..+++.|.++++.++.+. .....++++.|+++||++.|...+++||+|++.++++++++++++|.++++ ++.
T Consensus 323 ~-~~~~~~~~g~~~~v~~~~~~-~~~~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~~~~~i~~~l~~l~~~l~-~~~ 397 (400)
T PTZ00125 323 P-WVKEIRGKGLLNAIVFDHSD-GVNAWDLCLKLKENGLLAKPTHDNIIRFAPPLVITKEQLDQALEIIKKVLK-SFD 397 (400)
T ss_pred C-CeEEEecccEEEEEEEccCc-chHHHHHHHHHHHCCeEEeecCCCEEEEECCccCCHHHHHHHHHHHHHHHH-HHh
Confidence 3 66677899999999886421 136778999999999999998889999999999999999999999999998 763
No 72
>PRK07046 aminotransferase; Validated
Probab=100.00 E-value=1.6e-57 Score=458.01 Aligned_cols=390 Identities=23% Similarity=0.342 Sum_probs=326.0
Q ss_pred CCchHHHHHHHhhhcccCC---------CCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHH
Q 012138 36 SSSSQQLINLEYEYSAHNY---------HPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEK 106 (470)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~---------~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~ 106 (470)
.++|.++.++.++++.... .+.|+++++++|+++||.||++||||.+++++.++||+||+|.+++.+++++
T Consensus 27 ~~~S~~l~~ra~~~~p~g~~~~~~~~~~~~~p~~~~~a~G~~v~D~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~ 106 (453)
T PRK07046 27 HPRSRALAARAAQHLLGGVPMHWMNDWPTPFPLFVAEARGARFTDVDGHRYDDFCLGDTGAMFGHSPAPVARALAEQARR 106 (453)
T ss_pred ChhhHHHHHHHHhhCCCCcccccccccCCCCCCeEEeeeeCEEEeCCCCEEEEecccccccccCCCCHHHHHHHHHHHHh
Confidence 3568899999988765432 1468999999999999999999999999999999999999999999999998
Q ss_pred ccccCCCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcc
Q 012138 107 LTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISM 186 (470)
Q Consensus 107 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~ 186 (470)
.... .+.++...+++++|++..+.+++.|+|||+||++.|+|+++.+ .|++.|+.+.++|||++...+..
T Consensus 107 ~~~~--~~~~~~~~~lAe~l~~~~~~~~v~F~nSGtEA~e~AlrlAR~~--------TGr~~ii~~~g~YHG~~d~~l~~ 176 (453)
T PRK07046 107 GLTT--MLPSEDAAWVGEELARRFGLPYWQVATTATDANRFVLRWARAV--------TGRPKILVFNGCYHGTVDDVFVD 176 (453)
T ss_pred CCCC--CCCCHHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHHHHHHHh--------hCCCEEEEECCCCCCCcHHhHhh
Confidence 6542 3467788999999999888999999999999999999999986 36779999999999997554432
Q ss_pred --cCCcccccCCCC----CCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcE
Q 012138 187 --SCDNEAIRGFGP----LLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNIL 260 (470)
Q Consensus 187 --~~~~~~~~~~~~----~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gil 260 (470)
++.+..+..+.+ ...++..+||||++++++++.. +++++||+||+++.+|.+.|+++|+++|+++|++||++
T Consensus 177 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~--~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~l 254 (453)
T PRK07046 177 LVDGRPVQRPGLLGQVHDLTATTRVVEFNDLAALEAALAD--GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTL 254 (453)
T ss_pred ccCCCCCCCCCCCCCCccccCceEeeCCCCHHHHHHHhCC--CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCE
Confidence 222212222221 1234678899999999999953 48999999999999999999999999999999999999
Q ss_pred EEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCc---------CCccCCCCCCHHHH
Q 012138 261 MIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP---------GEHGSTFGGNPLAS 331 (470)
Q Consensus 261 lI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~---------~~~~~t~~~~~~~~ 331 (470)
||+|||++ | |.|.....+++++.||+++++|+++||+ |+|++++++++++.+.+ ..+++||++||++|
T Consensus 255 lI~DEV~t-f-r~g~Gg~~~~~gv~PDi~t~gK~lggG~-Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~ 331 (453)
T PRK07046 255 LVIDETHT-I-SSGPGGYTRAHGLEPDFLVVGKPIAGGV-PCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAM 331 (453)
T ss_pred EEEEcccc-C-ccCCcchhHHhCCCccceeehhhhcCCC-cceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHH
Confidence 99999998 4 2443334567899999999999999997 99999999999998752 13678999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC-----------chhHHHHHH
Q 012138 332 AVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-----------PVSAYDICL 400 (470)
Q Consensus 332 aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~-----------~~~~~~~~~ 400 (470)
+++.++|+.++++++.+++++++++|+++|+++..+++ .+..+++.|+++.+.+..... ......+..
T Consensus 332 aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~-~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (453)
T PRK07046 332 AAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIARHG-LPWHVTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHL 410 (453)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHH
Confidence 99999999998888999999999999999999887775 677899999998887743210 012346778
Q ss_pred HHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 401 KMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 401 ~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
.|+++||++.+. .+.++++|+ +|++||++++++++++++ ++
T Consensus 411 ~~~~~Gv~~~~~-~~~~~~~p~--~t~~did~~~~~~~~~l~-~~ 451 (453)
T PRK07046 411 YLLNRGVLITPF-HNMMLVCPA--TTAADVDRLVAAFDACLG-EL 451 (453)
T ss_pred HHHHCCCEEecc-cCcEEEeCC--CCHHHHHHHHHHHHHHHH-HH
Confidence 889999999874 467889875 999999999999999998 65
No 73
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=3.1e-57 Score=451.56 Aligned_cols=370 Identities=38% Similarity=0.643 Sum_probs=329.6
Q ss_pred CCCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCC
Q 012138 54 YHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYD 133 (470)
Q Consensus 54 ~~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 133 (470)
+.+.|+++++++|+++||.||++||||.+++++.++||+||+|.+++.+++++..+.+..+.++...++++++.+..+.+
T Consensus 8 ~~~~~~~~~~~~G~~~~d~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~ 87 (377)
T PRK02936 8 YGRFPIDIVKGKGTKVTDNNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHVSNLFTNSLQEEVASLLAENSAGD 87 (377)
T ss_pred ccCCCceEEEeecCEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhcCCCC
Confidence 34578999999999999999999999999999999999999999999999988655444456778889999999887778
Q ss_pred eEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHH
Q 012138 134 MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITA 213 (470)
Q Consensus 134 ~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 213 (470)
++++++||++|++.|+++++.+ ++++.|++++++|||++..++.+++....+..+.+..+++..++|+|+++
T Consensus 88 ~~~~~~sG~~a~~~A~~~a~~~--------~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 159 (377)
T PRK02936 88 LVFFCNSGAEANEAALKLARKH--------TGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKA 159 (377)
T ss_pred EEEEeCCcHHHHHHHHHHHHHh--------cCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHH
Confidence 9999999999999999988865 36668999999999999999888876666667777777888899999999
Q ss_pred HHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccc
Q 012138 214 LEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGK 293 (470)
Q Consensus 214 Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK 293 (470)
+++.+.+ ++++|++||+++++|.+.++++++++|+++|++||+++|+||+|+|||++|.+++++++++.||+++|||
T Consensus 160 l~~~~~~---~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK 236 (377)
T PRK02936 160 LKEVMNE---EVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPDIVTVAK 236 (377)
T ss_pred HHHhccC---CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCcEEEEcc
Confidence 9998875 7999999999999999988999999999999999999999999999999998877777889999999999
Q ss_pred cccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceE
Q 012138 294 ALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVK 373 (470)
Q Consensus 294 ~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~ 373 (470)
++++|+ |+|++++++++++.+....+.++|++++++++++.++|+.+..+++.++++++++++++.|+++...+| .+.
T Consensus 237 ~l~~G~-~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~ 314 (377)
T PRK02936 237 GLGNGI-PVGAMIGKKELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEELEHLE-CVK 314 (377)
T ss_pred cccCCC-ccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCC-cEE
Confidence 999998 999999999999999877778899999999999999999987777889999999999999998655554 567
Q ss_pred EEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 012138 374 EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 441 (470)
Q Consensus 374 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l 441 (470)
.+++.|.++++++.. ....+.+.|.++||++.+.+.+++||+||+.++++++++++++|++++
T Consensus 315 ~v~~~g~~~~i~~~~-----~~~~~~~~l~~~gv~v~~~g~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 315 NIRGKGLMIGIECTE-----EVAPVIEQLREEGLLVLSAGPNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred eEeecceEEEEEecc-----hHHHHHHHHHHCCeEEecCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 778889888887753 366789999999999998877899999999999999999999998864
No 74
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=100.00 E-value=3e-57 Score=476.98 Aligned_cols=402 Identities=22% Similarity=0.291 Sum_probs=326.2
Q ss_pred chHHHHHHHhhhcccCCCC-------CceEEEeecCC----EEEeCCCC----eEEeccCCcccccCC-CCCHHHHHHHH
Q 012138 38 SSQQLINLEYEYSAHNYHP-------VPIVFSQAKGS----SIWDPEGN----KYLDFLSAYSAVNQG-HCHPKIMKALQ 101 (470)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~-------~p~~~~~~~g~----~~~d~~G~----~~lD~~~~~~~~~lG-~~~p~v~~a~~ 101 (470)
+.+++.++..+++|+.|.+ -|.++++++|. |++|.+|+ +|||+.++++..++| |+||+|.+++.
T Consensus 313 ~~~~~~~~a~~~iw~Pftq~~~~~~~~~~vi~~a~G~~~~~~~~d~~G~~~~~~ylD~~sg~w~~~lG~h~~p~I~~Ai~ 392 (817)
T PLN02974 313 RLQSMPKEAGEVLWWPFTQHALVPRDSVTVIDSRCGEDFSVYKPKTNSTCSIVQQFDACASWWTQGPDPTLQPELARAVA 392 (817)
T ss_pred HHHHHHHHHhhhccCCcccccccCCCCceEEEeeecCceeEEEECCCCCcccceEEEcchhHHHhCCCcCCCHHHHHHHH
Confidence 3455666677777776542 35788999998 99999998 999999999999999 68999999999
Q ss_pred HHHHHccccCC-CCCCCcHHHHHHHHhhhhC---CCeEEecCChhHHHHHHHHHHHHhchhcccCCC-----------CC
Q 012138 102 EQAEKLTLSSR-AFYNDKFPVFAERLTSMFG---YDMVLPMNTGAEGVETALKLARKWGYVKKKFSI-----------DE 166 (470)
Q Consensus 102 ~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~---~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~-----------g~ 166 (470)
+|++++.+... .+.++...+|+++|.+..+ .++|+|++||+||+|.|||+++++.+..+|.++ ++
T Consensus 393 ~Qa~rl~hv~~~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r 472 (817)
T PLN02974 393 YAAGRYGHVMFPENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGDLIE 472 (817)
T ss_pred HHHhhCCccccCccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCC
Confidence 99999887654 3568889999999999664 479999999999999999999752222223221 46
Q ss_pred cEEEEEccCccccccchhcccCCcccccCC-CCC-C--------CCe--------eeecCC--C----------------
Q 012138 167 AIIVSCCGCFHGRTLAAISMSCDNEAIRGF-GPL-L--------PGH--------LKVDFG--D---------------- 210 (470)
Q Consensus 167 ~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~-~~~-~--------~~~--------~~~~~~--d---------------- 210 (470)
.+||.+.++|||.|.+++++++.+.++..| .+. . |.. ..+|++ +
T Consensus 473 ~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f 552 (817)
T PLN02974 473 LKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVF 552 (817)
T ss_pred CEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCccccccccccccccccccccc
Confidence 789999999999999999998765444333 221 0 100 011111 0
Q ss_pred -------------HHHHHHHHHh-----cCCCeEEEEEccc-cCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCc
Q 012138 211 -------------ITALEKIFKE-----SGDQIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 271 (470)
Q Consensus 211 -------------~~~Le~~l~~-----~~~~~~~vi~epi-~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g 271 (470)
.+.+++.|++ .++++++||+||+ ++.+|.+.|+++|+++|+++|++||++||+|||++|||
T Consensus 553 ~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfG 632 (817)
T PLN02974 553 DKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLW 632 (817)
T ss_pred cccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCC
Confidence 2557777763 2458999999995 89999999999999999999999999999999999999
Q ss_pred ccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCc------CCccCCCCCCHHHHHHHHHHHHHHhhh-
Q 012138 272 RSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP------GEHGSTFGGNPLASAVAIASLDVIRDE- 344 (470)
Q Consensus 272 ~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~------~~~~~t~~~~~~~~aaa~a~l~~~~~~- 344 (470)
|+|++|+++++|+.|||++++|+++||++|+|++++++++++.|.. ..|++||++||++|+++.++|++++++
T Consensus 633 RtG~~fa~e~~gv~PDIi~~gKgLtgG~~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~ 712 (817)
T PLN02974 633 RLGVESAWELLGCKPDIACYAKLLTGGLVPLAATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPS 712 (817)
T ss_pred cccchhhHHhcCCCCCEEeecccccCCCCccEEEEEcHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHccc
Confidence 9999999999999999999999999997799999999999998852 258999999999999999999999886
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC-----chhHHHHHHHHH-HcCceeccCCCC
Q 012138 345 ---KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-----PVSAYDICLKMK-ERGILAKPTHDT 415 (470)
Q Consensus 345 ---~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~-----~~~~~~~~~~l~-~~Gv~~~~~~~~ 415 (470)
++.++.+++++++.+.|.+....+| .+.++++.|+|+++++..+.. ...+..+++.|+ ++||++.+. ++
T Consensus 713 ~~~~l~~~~~~l~~~l~~~l~~~l~~~p-~V~~VRg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~-Gn 790 (817)
T PLN02974 713 TNPNLIPPGSRLRELWDEELVRAISSLP-NVERVVSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPL-GN 790 (817)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCC-CeeEEEeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEec-CC
Confidence 4555666666777777743334565 899999999999999965421 112467888899 999999886 47
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHH
Q 012138 416 IVRLTPPLSISSNELQEGSKALHDVL 441 (470)
Q Consensus 416 ~iR~~~~~~~t~e~i~~~~~~l~~~l 441 (470)
++++.||+.++++++++++++|.+.|
T Consensus 791 vi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 791 VVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999998876
No 75
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=100.00 E-value=1.1e-57 Score=458.69 Aligned_cols=392 Identities=25% Similarity=0.425 Sum_probs=316.7
Q ss_pred HHHHHHhhhcccCCCCCceEEEeecCCEEEeC-CCCeEEeccCCcccccCCCCCHHHH--HHHHHHHHHccc---cCCCC
Q 012138 41 QLINLEYEYSAHNYHPVPIVFSQAKGSSIWDP-EGNKYLDFLSAYSAVNQGHCHPKIM--KALQEQAEKLTL---SSRAF 114 (470)
Q Consensus 41 ~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~d~-~G~~~lD~~~~~~~~~lG~~~p~v~--~a~~~~~~~~~~---~~~~~ 114 (470)
.+++...+|....-.|+++++++++|+++||. ||++||||.+++++.++||+||+|. +++.++++++.+ ....+
T Consensus 3 ~~~~~~~~~~~~~~~p~~~~~~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~ 82 (431)
T TIGR03251 3 RVHEVLSRHMLTDGFDLVLDLDRSRGSVLVDARDGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDV 82 (431)
T ss_pred hHHHHHHHHhhccCCceeeEEEeccCCEEEECCCCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCC
Confidence 45666777765443356666899999999996 9999999999999999999999999 999999987642 22235
Q ss_pred CCCcHHHHHHHHhhhh---CCCeEEecCChhHHHHHHHHHHHHhchh---cccCCC-CCcEEEEEccCccccccchhccc
Q 012138 115 YNDKFPVFAERLTSMF---GYDMVLPMNTGAEGVETALKLARKWGYV---KKKFSI-DEAIIVSCCGCFHGRTLAAISMS 187 (470)
Q Consensus 115 ~~~~~~~l~~~l~~~~---~~~~v~~~~sGteA~~~al~~~~~~~~~---~~~~~~-g~~~ii~~~~~yhg~~~~~~~~~ 187 (470)
.++...+++++|++.. +.++++|+|||+||++.|+|+++.|+.. .+|.++ ++.+||.+.++|||++.++++++
T Consensus 83 ~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~ 162 (431)
T TIGR03251 83 YTVAMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLT 162 (431)
T ss_pred CCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhcc
Confidence 5677788888888874 4689999999999999999999986421 122221 24589999999999999999988
Q ss_pred CCcccccCCCCCCCC------eeeec-------------CCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHH
Q 012138 188 CDNEAIRGFGPLLPG------HLKVD-------------FGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLK 248 (470)
Q Consensus 188 ~~~~~~~~~~~~~~~------~~~~~-------------~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~ 248 (470)
+...++..+.+..+. ...++ +++++++++.+..+++++++||+||+++.+|.+.|+++|++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~ 242 (431)
T TIGR03251 163 NTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLR 242 (431)
T ss_pred CCccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHH
Confidence 754444433332110 00111 12456677788766678999999999999999999999999
Q ss_pred HHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHH---Hh-hcC-cCCccCC
Q 012138 249 AVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV---ML-CIQ-PGEHGST 323 (470)
Q Consensus 249 ~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~---~~-~~~-~~~~~~t 323 (470)
+|+++|++||++||+||||+|||++|.+|+++++++.||+++++|++ ++++++..+++ ++ .+. ...+++|
T Consensus 243 ~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~~gK~~-----~~~g~~~~~~i~~~~~~~~~~~~~~~~T 317 (431)
T TIGR03251 243 AMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVAFGKKT-----QVCGIMAGRRVDEVADNVFAVPSRLNST 317 (431)
T ss_pred HHHHHHHHcCCEEEEecchhccCccchHHHHHhcCCCCCEEEecccC-----ccceEEecchHHHhhhhcccCccccCCC
Confidence 99999999999999999999999999999999999999999999986 33344444443 22 121 2347889
Q ss_pred CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHH
Q 012138 324 FGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK 403 (470)
Q Consensus 324 ~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~ 403 (470)
|++||++++++.++|+.++++++.++++++++++++.|+++..++|..+..+++.|+|+.+++.... ....+.+.|+
T Consensus 318 ~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~~---~~~~~~~~l~ 394 (431)
T TIGR03251 318 WGGNLVDMVRATRILEIIEEERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPSTA---DRDEVIRQLY 394 (431)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCCHH---HHHHHHHHHH
Confidence 9999999999999999999888999999999999999999887775477888999999999986432 4667999999
Q ss_pred HcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHH
Q 012138 404 ERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDV 440 (470)
Q Consensus 404 ~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~ 440 (470)
++||++.+.+.+.+||+||+.+|++||++++++|.++
T Consensus 395 ~~Gvl~~~~g~~~lr~~P~l~~t~~eid~~l~~l~~~ 431 (431)
T TIGR03251 395 REGVLLLGCGERSIRFRPPLTVTREEIDAAIDAIRRV 431 (431)
T ss_pred hCCeEEecCCCCeEEEECCccCCHHHHHHHHHHHHhC
Confidence 9999998877789999999999999999999999763
No 76
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=4e-56 Score=446.93 Aligned_cols=394 Identities=44% Similarity=0.763 Sum_probs=343.9
Q ss_pred chHHHHHHHhhhcccCCCCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCC
Q 012138 38 SSQQLINLEYEYSAHNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYND 117 (470)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~ 117 (470)
.|.++....+++.++.+.++|+++++++|+++||.||++||||.+++++.++||+||++.+++.+++++.......+.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~d~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~ 81 (396)
T PRK02627 2 TSEAIIELEKKYLMNTYGRLPIAFVRGEGARLWDDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTSNLYYIE 81 (396)
T ss_pred CHHHHHHHHHHhhcccccCCCceEEeeeeCEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhccccccccCCH
Confidence 35677777777777878788999999999999999999999999999999999999999999999998865544445678
Q ss_pred cHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCC
Q 012138 118 KFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFG 197 (470)
Q Consensus 118 ~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~ 197 (470)
.+.+++++|++..+.+++++++||++|++.|+++++.++ .+.. .++..|++++++|||.+..++.+++.+.++..+.
T Consensus 82 ~~~~la~~l~~~~~~~~v~~~~gg~eA~~~al~~a~~~~--~~~~-~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~ 158 (396)
T PRK02627 82 PQEELAEKLVELSGMDKVFFCNSGAEANEAAIKLARKYG--HKKG-IEKPEIITAENSFHGRTLATLSATGQPKYQEGFE 158 (396)
T ss_pred HHHHHHHHHHhhcCCCEEEECCCcHHHHHHHHHHHHHHh--cccC-CCCCeEEEECCCcCcccHHHHHhcCCccccccCC
Confidence 899999999999899999999999999999999998752 1100 1125799999999999999888887665555566
Q ss_pred CCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcc
Q 012138 198 PLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML 277 (470)
Q Consensus 198 ~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~ 277 (470)
+...+...++++|+++|++++.+ ++++|++||++|++|...++++++++|+++|++||++||+||+|+||+++|.++
T Consensus 159 ~~~~~~~~~~~~d~~~l~~~i~~---~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~ 235 (396)
T PRK02627 159 PLVEGFIYVPFNDIEALKAAITD---KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLF 235 (396)
T ss_pred CCCCCceEeCCCCHHHHHHhcCC---CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCcee
Confidence 66666778899999999999954 899999999999999666699999999999999999999999999999999877
Q ss_pred ccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q 012138 278 ASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEEL 357 (470)
Q Consensus 278 ~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l 357 (470)
+++.+++.||+++|||++++|+ |+|++++++++++.+....+.++|+.++++++++.++|+.++++++.++++++++++
T Consensus 236 ~~~~~~~~pdi~t~sK~~~~G~-rig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~ 314 (396)
T PRK02627 236 AYQHYGIEPDIMTLAKGLGGGV-PIGAVLAKEKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYL 314 (396)
T ss_pred eehhcCCCCCEEEEcchhhCCc-ccEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Confidence 7777899999999999999998 999999999999998776788899999999999999999988878899999999999
Q ss_pred HHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHH
Q 012138 358 RQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKAL 437 (470)
Q Consensus 358 ~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l 437 (470)
++.|.++...+| .+..+++.|.++++++.. +..++++.|+++||++.|++.+++||+|++.++++++++++++|
T Consensus 315 ~~~l~~~~~~~~-~~~~~~~~g~~~~i~~~~-----~~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~~~~~i~~~~~~l 388 (396)
T PRK02627 315 RAKLRELLEKYP-GIKEVRGLGLMIGIELDR-----PAAEIVKKALEKGLLINVTGDNVLRLLPPLIISKEEIDEAVDRL 388 (396)
T ss_pred HHHHHHHHHhCC-CeeeeccCcEEEEEEecC-----cHHHHHHHHHHCCeEEeecCCCEEEEECCcccCHHHHHHHHHHH
Confidence 999998876664 566778889999888732 57789999999999999887889999999999999999999999
Q ss_pred HHHHhccc
Q 012138 438 HDVLELDL 445 (470)
Q Consensus 438 ~~~l~~~~ 445 (470)
+++++ ++
T Consensus 389 ~~~l~-~~ 395 (396)
T PRK02627 389 EEVLK-EL 395 (396)
T ss_pred HHHHH-hh
Confidence 99987 54
No 77
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=100.00 E-value=1.2e-56 Score=437.44 Aligned_cols=324 Identities=46% Similarity=0.813 Sum_probs=288.5
Q ss_pred EEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccC-CCCCCCcHHHHHHHHhhhh--CCCeEE
Q 012138 60 VFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSS-RAFYNDKFPVFAERLTSMF--GYDMVL 136 (470)
Q Consensus 60 ~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~--~~~~v~ 136 (470)
++++++|+|+||.||++||||.+++++.++||+||++.+++.++++...+.+ ..+.++...+++++|.+.. +.++++
T Consensus 1 ~i~~a~G~~l~d~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~ 80 (339)
T PF00202_consen 1 FIERAEGAYLWDVDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSFSGFTHPEAAELAEKLAELFPGGLDRVF 80 (339)
T ss_dssp EEEEEEBTEEEETTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCSTTTSEEHHHHHHHHHHHHHSSTTEEEEE
T ss_pred CeEEeecCEEEECCCCEEEECCCCccceecCCCccccchhHHHHhhhcccccccceeccchhhhhhhhhhccccccceee
Confidence 5789999999999999999999999999999999999999999999987765 4567788899999999998 678999
Q ss_pred ecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHH---
Q 012138 137 PMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITA--- 213 (470)
Q Consensus 137 ~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--- 213 (470)
|++||+||++.|+++++.+... ...+++..|+++.++|||++..++++++.+.++..+.+..+++..+|++++..
T Consensus 81 f~~sGseAve~Alkla~~~~~~--~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 158 (339)
T PF00202_consen 81 FANSGSEAVEAALKLARQYHNK--RAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEE 158 (339)
T ss_dssp EESSHHHHHHHHHHHHHHHHHH--THHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHH
T ss_pred eccCchHHHHHHHHHhhccccc--ccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhh
Confidence 9999999999999999932111 11146779999999999999999999988888888889888889999998766
Q ss_pred -------HHHHHHh-cCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCC
Q 012138 214 -------LEKIFKE-SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 285 (470)
Q Consensus 214 -------Le~~l~~-~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~ 285 (470)
+++.+.+ ..+++++||+||+++.+|.+.++++|+++|+++|++||+++|+||||+||||+|++|+++++++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~ 238 (339)
T PF00202_consen 159 EQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVD 238 (339)
T ss_dssp HHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSS
T ss_pred HHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccceeccccc
Confidence 4444432 24589999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeccccccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Q 012138 286 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQ 365 (470)
Q Consensus 286 pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~ 365 (470)
||++++||+++||+ |+|++++++++++.+.+..+++||+++|++|+++.++|+.++++++.++++++++++++.|+++.
T Consensus 239 PDiv~~gK~l~gG~-p~sav~~~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~~L~~l~ 317 (339)
T PF00202_consen 239 PDIVTFGKGLGGGL-PISAVLGSEEIMEAFQPGSHGSTFGGNPLSCAAALATLEILEEEDLLERVRELGERLREGLRELA 317 (339)
T ss_dssp SSEEEEEGGGGTTS-SEEEEEEEHHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred Ccccccccchhhhh-hcccccccchhhccccccccccccccchHhhhhhhhHHHhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999996 99999999999999988889999999999999999999999999999999999999999999999
Q ss_pred hhCCCceEEEeccceeEEEEec
Q 012138 366 QQFPNYVKEVRGRGLFNAVEFD 387 (470)
Q Consensus 366 ~~~p~~~~~~~~~g~~~~~~~~ 387 (470)
.++| .+..+++.|+|+.+++.
T Consensus 318 ~~~~-~i~~vrg~Gl~~~ie~~ 338 (339)
T PF00202_consen 318 ARYP-LIGEVRGIGLMIGIELV 338 (339)
T ss_dssp HHTT-TEEEEEEETTEEEEEES
T ss_pred HhCC-CeEEEeeeCeEEEEEEE
Confidence 9885 89999999999999875
No 78
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=100.00 E-value=3.1e-55 Score=443.12 Aligned_cols=391 Identities=26% Similarity=0.465 Sum_probs=326.7
Q ss_pred hHHHHHHHhhhcccC-------CC---CCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHcc
Q 012138 39 SQQLINLEYEYSAHN-------YH---PVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLT 108 (470)
Q Consensus 39 ~~~~~~~~~~~~~~~-------~~---~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~ 108 (470)
|+++.++.++++... +. +.|+++++++|+++||.||++||||.+++++.++||+||+|++++.+++++..
T Consensus 2 s~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~ 81 (423)
T TIGR00713 2 SENLFEEAKQVFPGGVNSPVRAFKSVGPTPFFVARGKGAYLYDVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGT 81 (423)
T ss_pred cHHHHHHHHhhCCCCCCCcccccccCCCCCeeEEeccCCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCC
Confidence 677888888876432 21 45899999999999999999999999999999999999999999999998865
Q ss_pred ccCCCCCCCcHHHHHHHHhhhhC-CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhccc
Q 012138 109 LSSRAFYNDKFPVFAERLTSMFG-YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMS 187 (470)
Q Consensus 109 ~~~~~~~~~~~~~l~~~l~~~~~-~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~ 187 (470)
.+ .+.++...+++++|++.++ .++|+|++||+||++.|+++++.+ .++..||++.++|||++.....++
T Consensus 82 ~~--~~~~~~~~~lae~l~~~~~~~~~v~~~~sGseA~e~Alk~ar~~--------~gr~~ii~~~~~yhG~~~~~~~~~ 151 (423)
T TIGR00713 82 SY--GAPTEAEILLAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGY--------TGRDKIIKFEGCYHGHHDALLVKA 151 (423)
T ss_pred cC--CCCCHHHHHHHHHHHHhCCcccEEEEeCCHHHHHHHHHHHHHHh--------hCCCEEEEEcCCCCCChhhhhccc
Confidence 32 2456678899999998874 578999999999999999999986 256799999999999987666544
Q ss_pred CC--cccccCCCCCC-----CCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcE
Q 012138 188 CD--NEAIRGFGPLL-----PGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNIL 260 (470)
Q Consensus 188 ~~--~~~~~~~~~~~-----~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gil 260 (470)
+. .....++.+.. +....++++|+++|+++++++++++++|++||+++.+|.+.|+++|+++|+++|++||++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~l 231 (423)
T TIGR00713 152 GSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSL 231 (423)
T ss_pred cCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCE
Confidence 32 11222222221 246778899999999999865558999999999888999997789999999999999999
Q ss_pred EEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCc---CCccCCCCCCHHHHHHHHHH
Q 012138 261 MIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP---GEHGSTFGGNPLASAVAIAS 337 (470)
Q Consensus 261 lI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~---~~~~~t~~~~~~~~aaa~a~ 337 (470)
||+||+|+|| ++|..++++++++.||+++|||++++|+ |+|++++++++++.+.. ..+++||++++++|+++.++
T Consensus 232 lI~DEv~~g~-r~g~~~~~~~~~~~pDi~t~sK~l~~G~-pig~v~~~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~ 309 (423)
T TIGR00713 232 LIFDEVMTGF-RVALGGAQEYFGVEPDLTTLGKIIGGGL-PVGAFGGRREIMERLAPEGPVYQAGTLSGNPLAMAAGLAT 309 (423)
T ss_pred EEEEcccccc-ccCcchhHHHhCCCcchhhhhhhhcCCC-ceeeeeEHHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHH
Confidence 9999999999 8887777778899999999999999997 99999999999998863 34678999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC----------chhHHHHHHHHHHcCc
Q 012138 338 LDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL----------PVSAYDICLKMKERGI 407 (470)
Q Consensus 338 l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~----------~~~~~~~~~~l~~~Gv 407 (470)
|+.++++++.++++++++++++.|+++..+++ .+..+++.|+++.+.+..+.. ......+++.|+++||
T Consensus 310 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv 388 (423)
T TIGR00713 310 LKLLDEEGVYTELDELAKRLAEGLSEVLEDTG-IPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLDKGV 388 (423)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHHCCe
Confidence 99998878999999999999999998777764 677788999999988763210 0123468889999999
Q ss_pred eeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 408 LAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 408 ~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
++.+...+.+||+|+ +|+++|++++++|.++++ ++
T Consensus 389 ~v~~~~~~~~~l~~~--~t~~~i~~~~~~l~~~l~-~~ 423 (423)
T TIGR00713 389 FLPPSQFEACFLSAA--HTEEDIENTIEAAEEVFA-EL 423 (423)
T ss_pred EEecCCccceeeECC--CCHHHHHHHHHHHHHHHh-hC
Confidence 988765567899976 899999999999999987 53
No 79
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=100.00 E-value=1.3e-54 Score=437.53 Aligned_cols=396 Identities=29% Similarity=0.539 Sum_probs=334.9
Q ss_pred hHHHHHHHhhhcccCCC-CCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCC-CCC
Q 012138 39 SQQLINLEYEYSAHNYH-PVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRA-FYN 116 (470)
Q Consensus 39 ~~~~~~~~~~~~~~~~~-~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~-~~~ 116 (470)
.+++.++.+++....+. +.|+++++++|+++||.||++||||.+++++.++||+||++.+++.++++++.+.... +.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~l~d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~~~~~~ 83 (425)
T PRK08088 4 NKSLMQRRSAAVPRGVGQIHPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAY 83 (425)
T ss_pred HHHHHHHHHHhhccccCCCCCceEEeeeeCEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccccccCC
Confidence 45667666666666653 4589999999999999999999999999999999999999999999999987654322 335
Q ss_pred CcHHHHHHHHhhhhCC---CeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCC-ccc
Q 012138 117 DKFPVFAERLTSMFGY---DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD-NEA 192 (470)
Q Consensus 117 ~~~~~l~~~l~~~~~~---~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~-~~~ 192 (470)
+...+++++|++..+. ++++|++||+||++.|+++++.++ ++..||++.++|||++..+.++++. ..+
T Consensus 84 ~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar~~~--------~r~~iv~~~~~yHG~~~~~~~~~~~~~~~ 155 (425)
T PRK08088 84 EPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAAT--------KRSGVIAFTGAYHGRTHYTLALTGKVNPY 155 (425)
T ss_pred HHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHHh--------CCCeEEEECCccCCccHHHHHhhCCCCcc
Confidence 6778999999987652 689999999999999999998862 4557888999999999999888764 234
Q ss_pred ccCCCCCCCCeeeecC----CC------HHHHHHHHHh--cCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcE
Q 012138 193 IRGFGPLLPGHLKVDF----GD------ITALEKIFKE--SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNIL 260 (470)
Q Consensus 193 ~~~~~~~~~~~~~~~~----~d------~~~Le~~l~~--~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gil 260 (470)
..++.+..+++...++ ++ +++|+++++. .++++++|++||+++..|.+.++++++++|+++|++||++
T Consensus 156 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~ 235 (425)
T PRK08088 156 SAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIM 235 (425)
T ss_pred ccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 5555555444333322 21 5678888862 2458999999999999999888999999999999999999
Q ss_pred EEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHH
Q 012138 261 MIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDV 340 (470)
Q Consensus 261 lI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~ 340 (470)
||+||+|+|++++|.++++++.++.||+.+|||++++|+ |+||+++++++++.+....+.+|++++++.++++.++|+.
T Consensus 236 lI~Dev~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~~G~-rig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~ 314 (425)
T PRK08088 236 LIADEVQTGAGRTGTLFAMEQMGVAADLTTFAKSIAGGF-PLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLKV 314 (425)
T ss_pred EEEeccccCCCcCcchhHHhhcCCCCCEEEEeccccCCC-cceeeEecHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 999999999999998887778899999999999999998 9999999999999998888889999999999999999999
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCC-----CchhHHHHHHHHHHcCceeccCC--
Q 012138 341 IRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-----LPVSAYDICLKMKERGILAKPTH-- 413 (470)
Q Consensus 341 ~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~~~~~l~~~Gv~~~~~~-- 413 (470)
++.+++.+++++.++++++.|.++...+| .+..+++.|+++++.+..+. .......+++.|.++||++.++.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~-~~~~v~g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~ 393 (425)
T PRK08088 315 FEQENLLQKANALGEKLKDGLLAIAEKHP-EIGDVRGLGAMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSCGPY 393 (425)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEeccceEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecCCCC
Confidence 98888999999999999999999988876 67788999999999884321 01346789999999999887654
Q ss_pred CCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 414 DTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 414 ~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
.+.+||+|++.+|+++|++++++|.+++. ++
T Consensus 394 ~~~iRl~~~~~~t~~ei~~~i~~l~~~l~-~~ 424 (425)
T PRK08088 394 YNVLRILVPLTIEDAQIRQGLEIIAQCFD-EA 424 (425)
T ss_pred CCEEEEECCCCcCHHHHHHHHHHHHHHHH-hh
Confidence 58999999999999999999999999998 54
No 80
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=4e-55 Score=440.59 Aligned_cols=393 Identities=26% Similarity=0.433 Sum_probs=331.9
Q ss_pred CchHHHHHHHhhhcccCC----------CCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHH
Q 012138 37 SSSQQLINLEYEYSAHNY----------HPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEK 106 (470)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~----------~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~ 106 (470)
++|++|.|+.++|+.... .+.|+++.+++|+++||.+|++||||.++++..++||+||+|.+++.+++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~G~~l~d~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~ 81 (426)
T PRK00062 2 SKSEELFERAKKLIPGGVNSPVRAFKSVGGTPRFIERAKGAYLYDVDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEK 81 (426)
T ss_pred chhHHHHHHHHHhCCCCcCCcccccCCCCCCCeEEEeCcCCEEEeCCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHh
Confidence 468999999998875432 2347899999999999999999999999999999999999999999999987
Q ss_pred ccccCCCCCCCcHHHHHHHHhhhh-CCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhc
Q 012138 107 LTLSSRAFYNDKFPVFAERLTSMF-GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAIS 185 (470)
Q Consensus 107 ~~~~~~~~~~~~~~~l~~~l~~~~-~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~ 185 (470)
... ..+.++...+|+++|++.+ +.++++|++||+||++.|+++++.+ .+++.||+++++|||++.....
T Consensus 82 ~~~--~~~~~~~~~~la~~L~~~~~~~~~v~~~~sGseA~e~Aik~a~~~--------~g~~~ii~~~~~yHG~t~~~~~ 151 (426)
T PRK00062 82 GLS--FGAPTELEVELAELVIELVPSIEMVRMVNSGTEATMSAIRLARGY--------TGRDKIIKFEGCYHGHADSLLV 151 (426)
T ss_pred CCc--CCCCCHHHHHHHHHHHHhCCCCCEEEEecCHHHHHHHHHHHHHHH--------hCCCeEEEEcCccCCchhhhhh
Confidence 432 2345677889999999876 5789999999999999999999986 2566899999999999977666
Q ss_pred ccCCcc--cccCCCCC-----CCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcC
Q 012138 186 MSCDNE--AIRGFGPL-----LPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN 258 (470)
Q Consensus 186 ~~~~~~--~~~~~~~~-----~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~g 258 (470)
.++... ....+.+. .++...++|+|++++++.+++.++++++||+||+++.+|.+.|+++|+++|+++|++||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~ 231 (426)
T PRK00062 152 KAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHG 231 (426)
T ss_pred ccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 543211 11111111 12457788999999999997655689999999999999999988999999999999999
Q ss_pred cEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCc---CCccCCCCCCHHHHHHHH
Q 012138 259 ILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP---GEHGSTFGGNPLASAVAI 335 (470)
Q Consensus 259 illI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~---~~~~~t~~~~~~~~aaa~ 335 (470)
+++|+||||+|| ++|.+++.+++++.||+++|||++++|+ |+|++++++++++.+.. ..+.+||+++|++++++.
T Consensus 232 ~llI~DEv~~G~-r~g~~~~~~~~~~~pDi~~~gK~l~~G~-p~ga~~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~ 309 (426)
T PRK00062 232 ALLIFDEVMTGF-RVALGGAQGYYGVTPDLTTLGKIIGGGL-PVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGL 309 (426)
T ss_pred CEEEEeechhcc-ccCCccHHHHhCCCcchHhhhhHhhCCC-cceeeeEHHHHHHhhccCCCceecccCcCCHHHHHHHH
Confidence 999999999999 7887777888899999999999999997 99999999999998853 246678999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC----------chhHHHHHHHHHHc
Q 012138 336 ASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL----------PVSAYDICLKMKER 405 (470)
Q Consensus 336 a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~----------~~~~~~~~~~l~~~ 405 (470)
++|+.++++++.++++++++++++.|+++..++| .+..+++.|+|+.+++..+.. ......+.+.|+++
T Consensus 310 a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 388 (426)
T PRK00062 310 ATLKLLKEPGFYEELEALTKRLAEGLKEAAKKAG-IPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDE 388 (426)
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcC-CceEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHC
Confidence 9999998888999999999999999999887775 677889999999999864320 01246799999999
Q ss_pred CceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 406 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 406 Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
||++.+.+.+.++++ +.+|++||++++++|+++++ ++
T Consensus 389 Gv~v~~~~~~~~~~~--~~~t~~ei~~~~~~l~~~l~-~~ 425 (426)
T PRK00062 389 GVYLAPSQFEAGFVS--AAHTDEDIEKTLEAARKAFA-AL 425 (426)
T ss_pred CeEeecCCcCceeee--ccCCHHHHHHHHHHHHHHHH-hh
Confidence 999988766677775 89999999999999999997 54
No 81
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=2.3e-53 Score=422.92 Aligned_cols=368 Identities=32% Similarity=0.542 Sum_probs=316.4
Q ss_pred CCCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCC
Q 012138 54 YHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYD 133 (470)
Q Consensus 54 ~~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 133 (470)
|.+.|+++.+++|+|+||.||++||||.++++..++|| ||++.+++.++++.+......+.++...++++++... ...
T Consensus 8 ~~~~~~~~~~~~G~~l~d~dg~~~lD~~s~~~~~~lG~-~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~-~~~ 85 (375)
T PRK04260 8 YKRAAIEFVKAEGNYLIDTDGKKYLDFSSGIGVTNLGF-HPQVQQALQKQAGLIWHSPNLYLNSLQEEVAQKLIGD-KDY 85 (375)
T ss_pred cCCCCceEEEeeeCEEEeCCCCEEEECCCCcccccCCC-CHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHhcC-cCC
Confidence 34568899999999999999999999999999999999 9999999999998765544334555666677666432 123
Q ss_pred eEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHH
Q 012138 134 MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITA 213 (470)
Q Consensus 134 ~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 213 (470)
.++|++||+||++.|+++++.+ .++..||+++++|||++..++++++.......+.+..+.+...+|+|+++
T Consensus 86 ~~~~~~SGseA~~~Al~~ar~~--------~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~ 157 (375)
T PRK04260 86 LAFFCNSGAEANEAAIKIARKA--------TGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNS 157 (375)
T ss_pred EEEEcCccHHHHHHHHHHHHHh--------cCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHHH
Confidence 5799999999999999999875 24568999999999999998888776555555555444445557889999
Q ss_pred HHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccc
Q 012138 214 LEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGK 293 (470)
Q Consensus 214 Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK 293 (470)
+++++.+ ++++|++||++|++|.+.++.+|++++.++|++||+++|+||+|+|||++|.++.++.+++.||+++|||
T Consensus 158 l~~~l~~---~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pdi~t~sK 234 (375)
T PRK04260 158 VKALVNK---NTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPDIFTLAK 234 (375)
T ss_pred HHHhcCC---CeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCCEEEecc
Confidence 9998864 7899999999999999998899999999999999999999999999999998777777899999999999
Q ss_pred cccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceE
Q 012138 294 ALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVK 373 (470)
Q Consensus 294 ~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~ 373 (470)
++++|+ |+|++++++++++.+....+.+||+++++.++++.++|+.++.+++.+++++..+++++.|.++...+| .+.
T Consensus 235 ~l~~G~-~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~ 312 (375)
T PRK04260 235 GLANGV-PVGAMLAKSSLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKE-TVT 312 (375)
T ss_pred cccCCc-ceEEEEEcHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCC-Cee
Confidence 999997 999999999999998776788899999999999999999998788999999999999999988776664 567
Q ss_pred EEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 012138 374 EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 441 (470)
Q Consensus 374 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l 441 (470)
.+++.|+++++++.. ...++.++|+++||++.+.+.+.+||+|++.++++++++++++|++++
T Consensus 313 ~~~~~g~~~~~~~~~-----~~~~~~~~l~~~Gi~v~~~~~~~lR~~~~~~~t~~~i~~~l~~l~~~~ 375 (375)
T PRK04260 313 TVRGLGYMIGIETTA-----DLSQLVEAARDKGLIVLTAGTNVIRLLPPLTLTKEEIEQGIAILSEVF 375 (375)
T ss_pred EEeccceEEEEEecC-----cHHHHHHHHHhCCCEEecCCCCEEEEcCCCccCHHHHHHHHHHHHHhC
Confidence 788899999998742 467899999999999988877899999999999999999999998764
No 82
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=100.00 E-value=3e-53 Score=428.53 Aligned_cols=386 Identities=46% Similarity=0.782 Sum_probs=332.3
Q ss_pred HhhhcccCC--CCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCC-CCCCcHHHH
Q 012138 46 EYEYSAHNY--HPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRA-FYNDKFPVF 122 (470)
Q Consensus 46 ~~~~~~~~~--~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~-~~~~~~~~l 122 (470)
.+++.+..+ .+.|+++++++|+++||.||++||||.++++..++||+||+|.+++.++++........ +.++...++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~g~~~~d~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l 84 (413)
T cd00610 5 DRKVLWHGYTVRPYPLVIVRAEGAYLYDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSLGFFYNEPAVEL 84 (413)
T ss_pred hhhhccccccCCCCCceEEeeecCEEEeCCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccCcccCCHHHHHH
Confidence 344555554 46789999999999999999999999999988999999999999999999876554432 256788999
Q ss_pred HHHHhhhhC--CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCC
Q 012138 123 AERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLL 200 (470)
Q Consensus 123 ~~~l~~~~~--~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 200 (470)
++.|+++++ .+++++++||++|++.++++++.+ .+++.|++++++|||++...+.+++...+...+.+..
T Consensus 85 ~~~l~~~~~~~~~~v~~~~sgsea~~~al~~~~~~--------~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T cd00610 85 AELLLALTPEGLDKVFFVNSGTEAVEAALKLARAY--------TGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLL 156 (413)
T ss_pred HHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHH--------cCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCC
Confidence 999999997 889999999999999999999864 2455899999999999999888876554544555555
Q ss_pred CCeeeecCC-----------CHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccC
Q 012138 201 PGHLKVDFG-----------DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 269 (470)
Q Consensus 201 ~~~~~~~~~-----------d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g 269 (470)
.++..+|++ |+++|+++++++++++++|++||+++++|.+.|+++++++|.++|++||+++|+||+|+|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g 236 (413)
T cd00610 157 PGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTG 236 (413)
T ss_pred CCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC
Confidence 667888888 899999999875557899999999999999988999999999999999999999999999
Q ss_pred CcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhc--CcCCccCCCCCCHHHHHHHHHHHHHHhhhhHH
Q 012138 270 LARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCI--QPGEHGSTFGGNPLASAVAIASLDVIRDEKLA 347 (470)
Q Consensus 270 ~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~--~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~ 347 (470)
||++|..+..+++++.||++++||++++|+ |+|++++++++++.+ ....+.+|+++++++++++.++|+.++++++.
T Consensus 237 ~g~~g~~~~~~~~~~~~d~~t~sK~l~~g~-~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~~~~~ 315 (413)
T cd00610 237 FGRTGKMFAFEHFGVEPDIVTLGKGLGGGL-PLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEEEGLL 315 (413)
T ss_pred CCcCcchhhHhhcCCCCCeEEEcccccCcc-ccEEEEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHH
Confidence 999998877788899999999999999997 999999999999985 45567789999999999999999999888899
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC-----chhHHHHHHHHHHcCceeccCCCCEEEEecC
Q 012138 348 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-----PVSAYDICLKMKERGILAKPTHDTIVRLTPP 422 (470)
Q Consensus 348 ~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~-----~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~ 422 (470)
++++++++++++.|+++...++ .+..+++.|.++++.+..... ......+++.|+++||++.|+..+.+|++|+
T Consensus 316 ~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~~~~lR~~~~ 394 (413)
T cd00610 316 ENAAELGEYLRERLRELAEKHP-LVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPSGGNVIRLLPP 394 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhhCC-cEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecCCCEEEEECC
Confidence 9999999999999998866443 566678899999998865310 1256789999999999999887789999999
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q 012138 423 LSISSNELQEGSKALHDVL 441 (470)
Q Consensus 423 ~~~t~e~i~~~~~~l~~~l 441 (470)
+.+|+++|++++++|++++
T Consensus 395 ~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 395 LIITEEEIDEGLDALDEAL 413 (413)
T ss_pred CcCCHHHHHHHHHHHHHhC
Confidence 9999999999999998864
No 83
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=100.00 E-value=8.2e-53 Score=375.11 Aligned_cols=397 Identities=29% Similarity=0.504 Sum_probs=330.8
Q ss_pred chHHHHHHHhhhccc----CCCCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCC
Q 012138 38 SSQQLINLEYEYSAH----NYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRA 113 (470)
Q Consensus 38 ~~~~~~~~~~~~~~~----~~~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~ 113 (470)
+..+.+..+++++-. .|..-|+.+.|++|.|++|.+|.+|||++++.. ..||+||+|++|...|+...+..++
T Consensus 6 SK~etlklRk~hIG~~Cq~Fy~sDP~kivRaq~QYmfDE~g~~yLDCInNVa--Hvghchp~VV~A~~kQmat~~tN~R- 82 (452)
T KOG1403|consen 6 SKTETLKLRKQHIGQACQLFYRSDPLKIVRAQGQYMFDEEGTRYLDCINNVA--HVGHCHPEVVRAGAKQMATISTNNR- 82 (452)
T ss_pred hhHHHHhHHHhccCcceeEEecCCchhhehhccceeeccCcccHHHHhhhhh--hcccCCHHHHHHHHHHHhHhcccch-
Confidence 346678888887754 356679999999999999999999999999874 4799999999999999998776554
Q ss_pred CCCCcHHHHHHHHhhhh-CCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCccc
Q 012138 114 FYNDKFPVFAERLTSMF-GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEA 192 (470)
Q Consensus 114 ~~~~~~~~l~~~l~~~~-~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~ 192 (470)
|.++...+.++.|...+ +++.++|+|||+|||.+|++++|.++ +...+|+.+..|||+....+.++... +
T Consensus 83 Flhd~lv~cA~~l~stlPeLsvc~F~NSGSEANDLALRLAR~ft--------khqDvItldHAYHGHl~s~mE~SPYK-F 153 (452)
T KOG1403|consen 83 FLHDELVQCARTLTSTLPELSVCFFVNSGSEANDLALRLARNFT--------KHQDVITLDHAYHGHLQSVMEVSPYK-F 153 (452)
T ss_pred hhHHHHHHHHHHHhhcCCCceEEEEecCCchhhHHHHHHHHhhc--------ccCceEEEechhccceeeeeecccee-c
Confidence 66777788888887665 68899999999999999999999963 55689999999999988877776421 1
Q ss_pred ccCCCCCCCC---------eeeecCC-------C-----HHHHHHHHHh---cCCCeEEEEEccccCCCccccCChhhHH
Q 012138 193 IRGFGPLLPG---------HLKVDFG-------D-----ITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLK 248 (470)
Q Consensus 193 ~~~~~~~~~~---------~~~~~~~-------d-----~~~Le~~l~~---~~~~~~~vi~epi~n~~G~~~~~~~~l~ 248 (470)
..+-....|+ ++.-+|. | .+.+++++.+ .+..++++|.|..++-+|.+.||.+|++
T Consensus 154 ~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq 233 (452)
T KOG1403|consen 154 NQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQ 233 (452)
T ss_pred cCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHH
Confidence 1111111122 1111111 1 3556766654 2357899999999999999999999999
Q ss_pred HHHHHHHhcCcEEEEeccccCCcccCCc-cccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCc--CCccCCCC
Q 012138 249 AVRDLCSKYNILMIADEIQSGLARSGRM-LASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP--GEHGSTFG 325 (470)
Q Consensus 249 ~l~~l~~~~gillI~Dev~~g~g~~G~~-~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~--~~~~~t~~ 325 (470)
++.+..+.+|-++|.||||.||||.|+. |+++.+++.|||++++|.+|+|. |+++++.++++.+.|.. ....+||+
T Consensus 234 ~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtmgKpmGNGh-PVa~VattkeIA~Af~atgv~YFNTyG 312 (452)
T KOG1403|consen 234 AVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTMGKPMGNGH-PVAAVATTKEIAQAFHATGVEYFNTYG 312 (452)
T ss_pred HHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccchheecccCCCCC-eeeEEeccHHHHHHhccccceehhccC
Confidence 9999999999999999999999999965 88999999999999999999999 99999999999999975 24567999
Q ss_pred CCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC-----chhHHHHHH
Q 012138 326 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-----PVSAYDICL 400 (470)
Q Consensus 326 ~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~-----~~~~~~~~~ 400 (470)
+||++||++++.++.+++++++++.++.+++|...|+++..+++ .+.++||.|+|+++++..+.. ...+..+..
T Consensus 313 GnPVsCAv~laVm~v~e~E~Lq~ha~~vG~~L~~lL~~~k~kh~-~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~ 391 (452)
T KOG1403|consen 313 GNPVSCAVGLAVMRVCEDENLQEHAQQVGEKLEVLLRRLKQKHE-CIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVN 391 (452)
T ss_pred CCchhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhcc-ceeccccceEEEeeeeecccccCCCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999886 899999999999999876542 234566778
Q ss_pred HHHHc-CceeccC--CCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccCCCC
Q 012138 401 KMKER-GILAKPT--HDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMR 449 (470)
Q Consensus 401 ~l~~~-Gv~~~~~--~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~~~ 449 (470)
+|++. +|+++.. +.|.+.|.||.+.++++.++++..|+++|. .+.+.-
T Consensus 392 rlke~y~VLlsaDGPh~NilKiKPPmCFneena~e~v~~ld~iLT-~mee~~ 442 (452)
T KOG1403|consen 392 RLKELYRVLLSADGPHRNILKIKPPMCFNEENADEFVLGLDEILT-VMEERL 442 (452)
T ss_pred HHHHhhhEEEecCCCCCceeecCCCcccChhhHHHHHHHHHHHHH-HHHHHH
Confidence 88887 7998743 478999999999999999999999999998 665443
No 84
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=100.00 E-value=3.8e-50 Score=404.04 Aligned_cols=363 Identities=24% Similarity=0.358 Sum_probs=288.1
Q ss_pred CCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhC-CCe
Q 012138 56 PVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFG-YDM 134 (470)
Q Consensus 56 ~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~ 134 (470)
+.|+++++++|+|+||.||++||||.+++++.++||+||+|.+++.+|+++..... .......+++++|.+..+ .++
T Consensus 29 ~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~--~~~~~~~~la~~l~~~~p~~~~ 106 (431)
T PRK06209 29 LAPGFIQRGSGAHVWDVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCNFT--RPSAIELDAAESFLELIDGADM 106 (431)
T ss_pred CCCeEEEeccCCEEEeCCCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCcCCC--CCCHHHHHHHHHHHHhCCccce
Confidence 35789999999999999999999999999999999999999999999999865321 233344578999999874 689
Q ss_pred EEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEE-ccCccccccchhcccC-CcccccCCCCCCCCeeeecCCCHH
Q 012138 135 VLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSC-CGCFHGRTLAAISMSC-DNEAIRGFGPLLPGHLKVDFGDIT 212 (470)
Q Consensus 135 v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~-~~~yhg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~ 212 (470)
++|++||+||++.|+|+++.| .|+..|+.+ .++|||........+. ..... .........++|||++
T Consensus 107 v~f~~sGseA~e~AlklAr~~--------tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~d~~ 175 (431)
T PRK06209 107 VKFCKNGSDATSAAVRLARAY--------TGRDLVARCADHPFFSTDDWFIGTTPMSAGIP---ASVSALTVTFRYNDIA 175 (431)
T ss_pred EEEecCHHHHHHHHHHHHHHH--------hCCCeEEEeccCccccccccccccCCCCCCCC---hhHhccccccCCCCHH
Confidence 999999999999999999986 356688888 6777763211110000 00000 0011224577899999
Q ss_pred HHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecc
Q 012138 213 ALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG 292 (470)
Q Consensus 213 ~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~s 292 (470)
+|+++++++++++++|++||+++. .|+++|+++|+++|++||++||+||||+||++++. +..+++++.||++++|
T Consensus 176 ~l~~~l~~~~~~~aavi~Epv~g~----~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~-g~~~~~gv~PDi~t~g 250 (431)
T PRK06209 176 SLEALFEDHPGRIACVILEPATAD----EPQDGFLHEVRRLCHENGALFILDEMITGFRWHMR-GAQKLYGIVPDLSCFG 250 (431)
T ss_pred HHHHHHHhCCCCEEEEEEccccCC----CCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcc-hhhHHhCCCcceeeeh
Confidence 999999866568999999998765 55899999999999999999999999999976532 2234579999999999
Q ss_pred ccccCCCcceeEEEecHHHHhh--cC------cCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Q 012138 293 KALGGGVIPVSAVLADKEVMLC--IQ------PGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKI 364 (470)
Q Consensus 293 K~l~gG~~~ig~v~~~~~~~~~--~~------~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l 364 (470)
|+++||+ |+|++++++++++. +. ...+++||++||++++++.++|+.++++++.++++++++++++.|+++
T Consensus 251 K~lggG~-p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~ 329 (431)
T PRK06209 251 KALGNGF-AVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKLAAGVNEA 329 (431)
T ss_pred hhhcCCc-ccEEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHH
Confidence 9999997 99999999999986 31 123688999999999999999999998899999999999999999998
Q ss_pred HhhCCCceEEEeccceeEEEEeccCC---C--chhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHH
Q 012138 365 QQQFPNYVKEVRGRGLFNAVEFDKTA---L--PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHD 439 (470)
Q Consensus 365 ~~~~p~~~~~~~~~g~~~~~~~~~~~---~--~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~ 439 (470)
..++| ....+++.|.+..+.+.... . ......+.+.|+++|+++.| ++++ ..+|+++|++++++|.+
T Consensus 330 ~~~~~-~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~p~-----l~is--~~ht~~dId~~l~~l~~ 401 (431)
T PRK06209 330 AAEHG-LQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETIRRGVLMPS-----LVVS--YAHGDADIERTIDAVHG 401 (431)
T ss_pred HHhCC-CCeEEEeecceEEEEEecCCcccCCcHHHHHHHHHHHHHCCccccc-----cccc--ccCCHHHHHHHHHHHHH
Confidence 87775 66678888887777664211 0 11123678889999998732 3444 68899999999999999
Q ss_pred HHhcccC
Q 012138 440 VLELDLP 446 (470)
Q Consensus 440 ~l~~~~~ 446 (470)
++. ++.
T Consensus 402 ~l~-~~~ 407 (431)
T PRK06209 402 ALG-VYR 407 (431)
T ss_pred HHH-HHH
Confidence 999 874
No 85
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=100.00 E-value=6.1e-50 Score=399.77 Aligned_cols=375 Identities=39% Similarity=0.690 Sum_probs=318.7
Q ss_pred CCCCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCC
Q 012138 53 NYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGY 132 (470)
Q Consensus 53 ~~~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 132 (470)
.+.+.|+++++++|.++||.+|++||||.++++.+++||+||.+.+++.++++........+..+...+++++++++++.
T Consensus 5 ~~~~~~~~~~~~~g~~~~~~~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~ 84 (379)
T TIGR00707 5 TYGRLPVKIVRGKGAYVYDVNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVSNLYYTEPQEELAEKLVEHSGA 84 (379)
T ss_pred ccCCCCccEEEeecCEEEeCCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCCC
Confidence 35578999999999999999999999999999999999999999999999998875544445677899999999999999
Q ss_pred CeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHH
Q 012138 133 DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDIT 212 (470)
Q Consensus 133 ~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 212 (470)
+++++++||++|++.++++++.+... ++ ++++.|++++++|||....+...++...+...+.+...+...++++|++
T Consensus 85 ~~~~~~~sg~~a~~~a~~~~~~~~~~-~~--~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 161 (379)
T TIGR00707 85 DRVFFCNSGAEANEAALKLARKYTGD-KG--KEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIE 161 (379)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHhhc-cC--CCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHH
Confidence 99999999999999999988653110 11 1245888999999999988887776554433445555666778889999
Q ss_pred HHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecc
Q 012138 213 ALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG 292 (470)
Q Consensus 213 ~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~s 292 (470)
+|++.+++ ++++|+++|+++++|.+.++.+++++|.++|++||+++|+||+|++|++.|..+.++..++.||+++||
T Consensus 162 ~l~~~~~~---~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~~t~s 238 (379)
T TIGR00707 162 SLKKAIDD---ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDIITLA 238 (379)
T ss_pred HHHHHhhh---CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCCEEEEc
Confidence 99999976 789999999988899876689999999999999999999999999999888765556678889999999
Q ss_pred ccccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCce
Q 012138 293 KALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYV 372 (470)
Q Consensus 293 K~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~ 372 (470)
|++++|+ |+|++++++++++.+.......+|+.++++++++.++|+.++..++.++++++++++++.|+++....+ +
T Consensus 239 K~~~~G~-riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~ 315 (379)
T TIGR00707 239 KGLGGGV-PIGATLAKEEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIEKERLLENVKEKGDYFKERLEELGKNYP--N 315 (379)
T ss_pred ccccCCc-ccEEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhCC--C
Confidence 9999998 999999999999999876677888999999999999999887777889999999999999988755432 3
Q ss_pred EEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 012138 373 KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 441 (470)
Q Consensus 373 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l 441 (470)
..+++.|.++++.++. +..++++.|.++||++.|.+.+++|++|++.+|++++++++++|++++
T Consensus 316 ~~~~~~g~~~~~~~~~-----~~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 316 KEVRGKGLMLGIELEA-----PCKDIVKKALEKGLLVNCAGPKVLRFLPPLIITKEEIDEAVSALEEAI 379 (379)
T ss_pred CccccCceEEEEEecC-----cHHHHHHHHHHCCcEEeeCCCCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 3455678888887653 357899999999999999877899999999999999999999998764
No 86
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.7e-48 Score=352.49 Aligned_cols=400 Identities=25% Similarity=0.345 Sum_probs=322.8
Q ss_pred CCCCCCchHHHHHHHhhhcccCCCCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHH-H-HHHccc
Q 012138 32 TSPSSSSSQQLINLEYEYSAHNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQE-Q-AEKLTL 109 (470)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~-~-~~~~~~ 109 (470)
.+.++++++++.++..++....--.+++..++..|.|++|+||+.+||..+.+.+.++|++||.+++++.. + +..+..
T Consensus 33 esIPGPks~~l~kel~~v~~t~~v~F~~dYEkS~GNYlvDvDGN~lLDvYsQIsSvplGYn~P~LvK~a~~p~~~~~lvn 112 (484)
T KOG1405|consen 33 ESIPGPKSQELKKELDKVQDTEAVHFFVDYEKSIGNYLVDVDGNRLLDVYSQISSVPLGYNNPALVKAAQQPQNATMLVN 112 (484)
T ss_pred ccCCCchhHHHHHHHhHhhcccceEEehhhhhhcCceEEecCCCeeehhhhhhcccccCCCCHHHHHHhcChHHHHHHhc
Confidence 36788999999888887665444446788999999999999999999999999999999999999998753 2 222211
Q ss_pred cCCCCCCCcHHHHHHHHhhh----h--CCCeEEecCChhHHHHHHHHHHHHhchhcc-c---------------CCCC--
Q 012138 110 SSRAFYNDKFPVFAERLTSM----F--GYDMVLPMNTGAEGVETALKLARKWGYVKK-K---------------FSID-- 165 (470)
Q Consensus 110 ~~~~~~~~~~~~l~~~l~~~----~--~~~~v~~~~sGteA~~~al~~~~~~~~~~~-~---------------~~~g-- 165 (470)
-+ ..-+-+..++++.+.+. . |.+.|.+.-+|+.|||.|++.+..|...++ | .+||
T Consensus 113 RP-ALg~fP~kd~~~~l~~~ll~~APKG~~~v~tm~cGs~aNEnA~K~afiwy~~k~rg~~~~s~~e~eScm~n~aPg~P 191 (484)
T KOG1405|consen 113 RP-ALGNFPPKDFAEKLRQSLLSIAPKGQKQVITMLCGSCANENAYKTAFIWYRAKERGQAGFSAEELESCMINQAPGAP 191 (484)
T ss_pred cc-cccCCChhhHHHHHHHHHHhhCcchHHHHHHHhccccccHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCCCC
Confidence 11 11122345666666552 2 677899999999999999999887643322 2 1232
Q ss_pred CcEEEEEccCccccccchhcccCCcc--------cccCCCCCCCCeeee----cCC------CHHHHHHHHHhcC---CC
Q 012138 166 EAIIVSCCGCFHGRTLAAISMSCDNE--------AIRGFGPLLPGHLKV----DFG------DITALEKIFKESG---DQ 224 (470)
Q Consensus 166 ~~~ii~~~~~yhg~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~----~~~------d~~~Le~~l~~~~---~~ 224 (470)
+-.|++|.++|||++++.++.+.... +.++..++..-.+++ .+| +++++|++|.++. ..
T Consensus 192 ~lsvlsF~gaFHGR~~g~lstT~SKpIHKldiPaFdWPiA~fP~ykYPLdenv~~N~ked~~Cl~~Ve~li~~~~~k~~p 271 (484)
T KOG1405|consen 192 DLSVLSFKGAFHGRTFGSLSTTHSKPIHKLDIPAFDWPIAPFPRYKYPLDENVAENKKEDQGCLAEVEDLIVKYRKKKKP 271 (484)
T ss_pred ceeeeeeccccccccccccccccCccccccCCCCCCCCCCCCccccCChhhhhhhhhhhhhhHHHHHHHHHHHHhhcCCC
Confidence 34688899999999999998876432 333333332111111 112 5889999998875 46
Q ss_pred eEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCC--cceeecccccc-CCCcc
Q 012138 225 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR--PDMVILGKALG-GGVIP 301 (470)
Q Consensus 225 ~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~--pdi~s~sK~l~-gG~~~ 301 (470)
++++|+||+|+++|....+++|++.|+++|+|||+.+|+||||+|-|.||++|++++|++. ||++||||-+- ||+
T Consensus 272 VaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD~vTFSKK~q~gGf-- 349 (484)
T KOG1405|consen 272 VAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPDVVTFSKKFQTGGF-- 349 (484)
T ss_pred eEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCCccceehhhhhhcCcc--
Confidence 8999999999999999999999999999999999999999999999999999999999985 89999998765 776
Q ss_pred eeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecccee
Q 012138 302 VSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF 381 (470)
Q Consensus 302 ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~ 381 (470)
.-+++++- -.++.+..||.+.|.-...+.+++++++++++.+++...++.|..+|.+++.++|+.+...||+|.|
T Consensus 350 ----fh~~~frp-n~pYrifNTWmGdP~k~lll~~vv~~I~~~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF 424 (484)
T KOG1405|consen 350 ----FHDEEFRP-NEPYRIFNTWMGDPSKNLLLEEVVQEIKREDLLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTF 424 (484)
T ss_pred ----ccCcccCC-CchHHHhhhhcCChHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceE
Confidence 22333321 1245678899999999999999999999999999999999999999999999999889999999999
Q ss_pred EEEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 382 NAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
+.|.+.... ..+.++..++-+|+.+..++...|||.|+++.++.+.+-++++|.++++
T Consensus 425 ~a~d~ps~~---~Rdk~i~~~~~nGv~~GGCg~~siRfRPsLvf~~~Ha~i~l~~~~k~l~ 482 (484)
T KOG1405|consen 425 IAWDCPSGS---IRDKLILIARLNGVNLGGCGDKSIRFRPSLVFRKHHADIFLDIFDKILA 482 (484)
T ss_pred EEEeCCChH---HHHHHHHHHHHcCceecccccceeeeccceeehhhhHHHHHHHHHHHhc
Confidence 999988765 7788999999999999999999999999999999999999999999987
No 87
>PRK07505 hypothetical protein; Provisional
Probab=100.00 E-value=6.5e-39 Score=321.93 Aligned_cols=349 Identities=18% Similarity=0.220 Sum_probs=255.8
Q ss_pred CCCceEEEeecCCEEEeCCCCeEEeccCCcccccCC-CCCHHHHHHHHHHHHHcc-cc--CC--CCCCCcHHHHHHHHhh
Q 012138 55 HPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQG-HCHPKIMKALQEQAEKLT-LS--SR--AFYNDKFPVFAERLTS 128 (470)
Q Consensus 55 ~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~-~~--~~--~~~~~~~~~l~~~l~~ 128 (470)
.|.++.+++++|+++||.||++||||.+. ..+| |+||+|++++.+++++++ .. .. .+.++...++++.|++
T Consensus 26 ~~~~~~~~~~~G~~~~d~~g~~~ld~~s~---~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~ 102 (402)
T PRK07505 26 GLNGLTVGEREGILITLADGHTFVNFVSC---SYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSE 102 (402)
T ss_pred ccccceeeccCCccEEecCCceEEEeecC---CccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHH
Confidence 35568899999999999999999999884 5678 999999999999998754 11 11 1345678899999999
Q ss_pred hhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecC
Q 012138 129 MFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF 208 (470)
Q Consensus 129 ~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (470)
+++. ++++++||++|++.+++++....++ +++..+|+++.+|||+...... .... ..++..+|+
T Consensus 103 ~~~~-~~~~~~sG~~a~~~ai~~~~~~~~~-----~~~~~vi~~~~~~H~s~~~~~~------~~~~----~~~v~~~~~ 166 (402)
T PRK07505 103 LFGA-SVLTFTSCSAAHLGILPLLASGHLT-----GGVPPHMVFDKNAHASLNILKG------ICAD----ETEVETIDH 166 (402)
T ss_pred HhCC-CEEEECChHHHHHHHHHHHHhcccC-----CCCCCEEEEchhhhHhHHhhhh------hhhc----CCeEEEeCC
Confidence 9987 7777889999999999987642111 2455788899999985422111 1111 134678899
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc--CCcccCCccccccCCC-C
Q 012138 209 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS--GLARSGRMLASDWEEV-R 285 (470)
Q Consensus 209 ~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~--g~g~~G~~~~~~~~~~-~ 285 (470)
+|+++|++++++. ...+|++|| +||+|.+.+ +++|.++|++||++||+||+|+ ++|++|.++..++++. .
T Consensus 167 ~d~~~l~~~~~~~--~~~~vl~~p-~~~~G~~~~----~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~ 239 (402)
T PRK07505 167 NDLDALEDICKTN--KTVAYVADG-VYSMGGIAP----VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRL 239 (402)
T ss_pred CCHHHHHHHHhcC--CCEEEEEec-ccccCCcCC----HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCC
Confidence 9999999998752 456777888 678999997 9999999999999999999994 6888888776677776 6
Q ss_pred ccee----eccccccCCCcceeEEE-ecHHHHhhcCcCCccCCCCC--CHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 012138 286 PDMV----ILGKALGGGVIPVSAVL-ADKEVMLCIQPGEHGSTFGG--NPLASAVAIASLDVIRDEKLAERSAHLGEELR 358 (470)
Q Consensus 286 pdi~----s~sK~l~gG~~~ig~v~-~~~~~~~~~~~~~~~~t~~~--~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~ 358 (470)
||.+ |+||+++++ .|+++ .++++++.+....+..+|++ ++++++++.++++.+.++.+.+.. ++++
T Consensus 240 ~d~~i~~~s~sK~~~~~---Gg~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~----~~l~ 312 (402)
T PRK07505 240 NERTIIAASLGKAFGAS---GGVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQ----QKLQ 312 (402)
T ss_pred CCCeEEEEechhhhhcc---CeEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHH----HHHH
Confidence 7744 899998843 24555 47888888876666677764 468999999999876654443332 2333
Q ss_pred HHHHHHHhhCCCceEEEeccceeEEE-EeccCCCchhHHHHHHHHHHcCceeccC-------CCCEEEEecCCCCCHHHH
Q 012138 359 QHLFKIQQQFPNYVKEVRGRGLFNAV-EFDKTALPVSAYDICLKMKERGILAKPT-------HDTIVRLTPPLSISSNEL 430 (470)
Q Consensus 359 ~~L~~l~~~~p~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------~~~~iR~~~~~~~t~e~i 430 (470)
+.+..+... ....+++.+.++.+ .+... ..+.++++.|+++||++.+. +.+++||+|++.+|+||+
T Consensus 313 ~~~~~~~~~---~~~~~~g~~~~i~~~~~~~~---~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei 386 (402)
T PRK07505 313 NNIALFDSL---IPTEQSGSFLPIRLIYIGDE---DTAIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEI 386 (402)
T ss_pred HHHHHHHHH---HHhcCCCCCCCEEEEEeCCH---HHHHHHHHHHHHCCCeEeeecCCCCCCCCceEEEecCccCCHHHH
Confidence 333222111 01123455555433 22221 24678999999999999754 236899999999999999
Q ss_pred HHHHHHHHHHHh
Q 012138 431 QEGSKALHDVLE 442 (470)
Q Consensus 431 ~~~~~~l~~~l~ 442 (470)
++++++|+++++
T Consensus 387 ~~~~~~l~~~l~ 398 (402)
T PRK07505 387 KRLCSLLKEILD 398 (402)
T ss_pred HHHHHHHHHHHH
Confidence 999999999987
No 88
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=2.7e-37 Score=314.21 Aligned_cols=342 Identities=20% Similarity=0.248 Sum_probs=262.9
Q ss_pred EEEeecCCEEEeCCCCeEEeccCC-cccccCCCCCHHHHHHHHHHHHHccccCC---C--CCCCcHHHHHHHHhhhhCCC
Q 012138 60 VFSQAKGSSIWDPEGNKYLDFLSA-YSAVNQGHCHPKIMKALQEQAEKLTLSSR---A--FYNDKFPVFAERLTSMFGYD 133 (470)
Q Consensus 60 ~~~~~~g~~~~d~~G~~~lD~~~~-~~~~~lG~~~p~v~~a~~~~~~~~~~~~~---~--~~~~~~~~l~~~l~~~~~~~ 133 (470)
++++++|.++| .+|++||||.++ +.... .||++.+++.+++++++.++. . .+.+.+.++++.|+++++.+
T Consensus 95 ~~~~~~G~~i~-~~G~~~id~~s~~~lgl~---~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~~ 170 (481)
T PLN02822 95 VLESAAGPHTI-INGKDVVNFASANYLGLI---GNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGTP 170 (481)
T ss_pred ceecCCCCeEE-ECCceEEEeECCCcCCCC---CCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCCC
Confidence 67889999999 899999999987 33322 699999999999999765322 1 24567899999999999754
Q ss_pred -eEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHH
Q 012138 134 -MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDIT 212 (470)
Q Consensus 134 -~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 212 (470)
.+++++ |..++..+++.+.+ +++ +|.+++.||++...++.+++. .+..++|||.+
T Consensus 171 ~~i~~s~-G~~a~~sai~a~~~---------~gd--~Ii~d~~~H~s~~~~~~ls~~------------~~~~~~~nd~~ 226 (481)
T PLN02822 171 DSILYSY-GLSTIFSVIPAFCK---------KGD--IIVADEGVHWGIQNGLYLSRS------------TIVYFKHNDME 226 (481)
T ss_pred CEEEECC-HHHHHHHHHHHhCC---------CCC--EEEEeCCccHHHHHHHHHcCC------------eEEEECCCCHH
Confidence 456665 55578888875532 233 444677789888777666642 24688999999
Q ss_pred HHHHHHHhcC------CCe-EEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc--CCcccCCccccccCC
Q 012138 213 ALEKIFKESG------DQI-AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS--GLARSGRMLASDWEE 283 (470)
Q Consensus 213 ~Le~~l~~~~------~~~-~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~--g~g~~G~~~~~~~~~ 283 (470)
+++..+++.. +++ ++|++|++++++|.+.| +++|+++|++||++||+||+|+ .+|++|++. .++++
T Consensus 227 ~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~----L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~-~e~~~ 301 (481)
T PLN02822 227 SLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAP----LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGL-SEHFG 301 (481)
T ss_pred HHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCCCCh-HHHcC
Confidence 9988886521 234 79999999999999998 9999999999999999999999 367788774 67788
Q ss_pred C---Ccceee--cccccc--CCCcceeEEEecHHHHhhcCcCCccCCCCCC--HHHHHHHHHHHHHHhh-hhHHHHHHHH
Q 012138 284 V---RPDMVI--LGKALG--GGVIPVSAVLADKEVMLCIQPGEHGSTFGGN--PLASAVAIASLDVIRD-EKLAERSAHL 353 (470)
Q Consensus 284 ~---~pdi~s--~sK~l~--gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~--~~~~aaa~a~l~~~~~-~~~~~~~~~~ 353 (470)
+ .+|+++ |||+++ || ++++++++++.++...++.+|+++ |..++++.++|+.+++ +++.++++++
T Consensus 302 v~~~~~dii~~s~sKalg~~GG-----~i~g~~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~ 376 (481)
T PLN02822 302 VPIEKIDIITAAMGHALATEGG-----FCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKEN 376 (481)
T ss_pred CCCCCCeEEEecchhhhhhCCe-----EEEcCHHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 7 678875 889998 54 588999999998877778888865 7788999999998876 6788999999
Q ss_pred HHHHHHHHHHHHhhCCCceEEE-eccceeEEEEeccC-CC----chhHHHHHHHHH-HcCceeccCC---------CCEE
Q 012138 354 GEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKT-AL----PVSAYDICLKMK-ERGILAKPTH---------DTIV 417 (470)
Q Consensus 354 ~~~l~~~L~~l~~~~p~~~~~~-~~~g~~~~~~~~~~-~~----~~~~~~~~~~l~-~~Gv~~~~~~---------~~~i 417 (470)
++++++.|+++. .+... .+.+.++.+.+... .. .....+++++|+ ++||++.+.. +..+
T Consensus 377 ~~~l~~~L~~~~-----g~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~l 451 (481)
T PLN02822 377 IALLHKGLSDIP-----GLSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGI 451 (481)
T ss_pred HHHHHHHHHhcC-----CcccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcE
Confidence 999999998742 12222 24455666666432 00 012467899998 7799998541 3469
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 418 RLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 418 R~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
|++++..+|+++|++++++|++++. ++
T Consensus 452 Ri~is~~~t~edI~~~~~~l~~~~~-~~ 478 (481)
T PLN02822 452 RLFVSAGHTESDILKASESLKRVAA-SV 478 (481)
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHH-HH
Confidence 9998899999999999999999987 54
No 89
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=2.4e-35 Score=296.50 Aligned_cols=332 Identities=19% Similarity=0.215 Sum_probs=255.0
Q ss_pred CCCeEEeccCCcccccCCC-CCHHHHHHHHHHHHHccccCC-----CCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHH
Q 012138 73 EGNKYLDFLSAYSAVNQGH-CHPKIMKALQEQAEKLTLSSR-----AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVE 146 (470)
Q Consensus 73 ~G~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~ 146 (470)
+|+++++|.++ ..||. +||+|++++.++++++++.+. ...++.+.+++++|+++++.+++++++||++|++
T Consensus 43 ~~~~~~~~~sn---~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~~~~~~SG~~An~ 119 (406)
T PRK13393 43 GPREVTVWCSN---DYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGKEAALLFTSGYVSNW 119 (406)
T ss_pred CCccEEEeecc---cccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCCCcEEEeCCcHHHHH
Confidence 45899999987 44555 799999999999998765421 1234568999999999999899999999999999
Q ss_pred HHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcC-CCe
Q 012138 147 TALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG-DQI 225 (470)
Q Consensus 147 ~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~-~~~ 225 (470)
.+++.+.... ++ .+|+.+..||+++..++...+.. ...++++|++++++.++... +++
T Consensus 120 ~ai~~l~~~~-------~g--~~I~~~~~~H~s~~~~~~~~g~~------------~~~~~~~d~~~l~~~l~~~~~~~~ 178 (406)
T PRK13393 120 AALSTLGSRL-------PG--CVILSDELNHASMIEGIRHSRAE------------KRIFRHNDPADLERKLSDLDPHRP 178 (406)
T ss_pred HHHHHhhcCC-------CC--CEEEEccchhHHHHHHHHHcCCe------------EEEeCCCCHHHHHHHHHhccCCCC
Confidence 9999553310 23 46677778899988776654321 35678889999999887542 367
Q ss_pred EEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-CC-cccCCccccccCCCC--ccee--eccccccCCC
Q 012138 226 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GL-ARSGRMLASDWEEVR--PDMV--ILGKALGGGV 299 (470)
Q Consensus 226 ~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g~-g~~G~~~~~~~~~~~--pdi~--s~sK~l~gG~ 299 (470)
++|++|+++|++|.+.| +++|.++|++||+++|+||+|+ |+ |+.|..+ .++.++. +|++ +|||+++.
T Consensus 179 ~~v~~~~v~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~-~~~~~~~~~~~i~~~tlsKa~g~-- 251 (406)
T PRK13393 179 KLVAFESVYSMDGDIAP----IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGI-AEREGLADRLTIIEGTLAKAFGV-- 251 (406)
T ss_pred EEEEEcCCCCCCCchhC----HHHHHHHHHHcCCEEEEECCccccccCCCCCch-hhhcCCCCCCeEEEEeCchhhcc--
Confidence 89999999999999998 9999999999999999999998 75 8888765 3555554 5776 99999982
Q ss_pred cceeEEEecHHHHhhcCcCCcc--CCCCCCHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHhhCCCceEEEe
Q 012138 300 IPVSAVLADKEVMLCIQPGEHG--STFGGNPLASAVAIASLDVIRDE-KLAERSAHLGEELRQHLFKIQQQFPNYVKEVR 376 (470)
Q Consensus 300 ~~ig~v~~~~~~~~~~~~~~~~--~t~~~~~~~~aaa~a~l~~~~~~-~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~ 376 (470)
..|++++++++++.+...... .+.+.+|.+++++.++|+.+++. ..+++.+++++++++.|++++ +..++
T Consensus 252 -~GG~~~~~~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g------~~~~~ 324 (406)
T PRK13393 252 -MGGYITGSAALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKAG------IPHLP 324 (406)
T ss_pred -cCceeeCCHHHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcC------CCcCC
Confidence 114578899988887654433 34567888999999999987653 234556778888888887752 22336
Q ss_pred ccceeEEEEeccCCCchhHHHHHHHHHHc-CceeccC-------CCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccC
Q 012138 377 GRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 377 ~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~-------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
+.|.++.+.+... ..+.++.+.|+++ ||++.+. +.+.+||+|++.+|++|+++++++|+++++ ++.
T Consensus 325 ~~~~i~~v~~~~~---~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~-~~~ 398 (406)
T PRK13393 325 NPSHIVPVMVGDP---VLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWA-RLG 398 (406)
T ss_pred CCCCeEEEEeCCH---HHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHH-hcC
Confidence 7788887755322 2567899999885 9998642 347899999999999999999999999998 754
No 90
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=100.00 E-value=1.1e-34 Score=291.63 Aligned_cols=331 Identities=19% Similarity=0.271 Sum_probs=251.3
Q ss_pred CCCeEEeccCC-cccccCCCCCHHHHHHHHHHHHHccccCC-----CCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHH
Q 012138 73 EGNKYLDFLSA-YSAVNQGHCHPKIMKALQEQAEKLTLSSR-----AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVE 146 (470)
Q Consensus 73 ~G~~~lD~~~~-~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~ 146 (470)
+|+++++|.++ |.+.. +||+|++++.+++++++..+. .++++.+.+|++.++++++.+.+++++||++||+
T Consensus 43 ~~~~~~~~~sn~ylgl~---~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~~~~l~~~sG~~an~ 119 (402)
T TIGR01821 43 GAKDVTVWCSNDYLGMG---QHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGKESALVFTSGYVAND 119 (402)
T ss_pred CCeeEEEeEccCcCCCC---CCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCCCeEEEECchHHHHH
Confidence 46999999887 54433 799999999999998765432 1245678999999999999888999999999999
Q ss_pred HHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcC-CCe
Q 012138 147 TALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG-DQI 225 (470)
Q Consensus 147 ~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~-~~~ 225 (470)
.+++++..+ ....+++.+..||++....+...+.+ ...++++|+++++++++... +++
T Consensus 120 ~ai~~l~~~---------~~~~~v~~~~~~h~s~~~~~~~~g~~------------~~~~~~~d~~~l~~~l~~~~~~~~ 178 (402)
T TIGR01821 120 ATLATLAKI---------IPGCVIFSDELNHASMIEGIRHSGAE------------KFIFRHNDVAHLEKLLQSVDPNRP 178 (402)
T ss_pred HHHHHhhCC---------CCCCEEEEcchHhHHHHHHHHHcCCe------------EEEECCCCHHHHHHHHHhccCCCC
Confidence 999987642 11245566666898887766554422 23567789999999997543 267
Q ss_pred EEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-C-CcccCCccccccCCC--Cccee--eccccccCCC
Q 012138 226 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLASDWEEV--RPDMV--ILGKALGGGV 299 (470)
Q Consensus 226 ~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g-~g~~G~~~~~~~~~~--~pdi~--s~sK~l~gG~ 299 (470)
++|++|+++||+|.+.| +++|.++|++||++||+||+|+ | +|..|... .+++++ .+|++ +|||+++.
T Consensus 179 ~~v~~e~~~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~-~~~~~~~~~~div~~t~sKa~g~-- 251 (402)
T TIGR01821 179 KIIAFESVYSMDGDIAP----IEEICDLADKYGALTYLDEVHAVGLYGPRGGGI-AERDGLMHRIDIIEGTLAKAFGV-- 251 (402)
T ss_pred eEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEeCcccccccCCCCCcc-chhccCCCCCeEEEEechhhhcc--
Confidence 89999999999999998 9999999999999999999999 5 45665543 344554 36776 99999982
Q ss_pred cceeEEEecHHHHhhcCcCCcc--CCCCCCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEe
Q 012138 300 IPVSAVLADKEVMLCIQPGEHG--STFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR 376 (470)
Q Consensus 300 ~~ig~v~~~~~~~~~~~~~~~~--~t~~~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~ 376 (470)
..|++++++++++.+...... .+.+.++.+++++.++|+.+++ +.+.++.+++++++++.|++++ +..+.
T Consensus 252 -~GG~i~~~~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g------~~~~~ 324 (402)
T TIGR01821 252 -VGGYIAASRKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEALG------IPVIP 324 (402)
T ss_pred -CCceeecCHHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHcC------CCcCC
Confidence 114588899998887643322 3445889999999999998876 3456667788899999888753 22233
Q ss_pred ccceeEEEEeccCCCchhHHHHHHHHHHc-CceeccC-------CCCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 377 GRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 377 ~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~-------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
+.+.++.+.+... ..+.++++.|+++ ||++.+. +.+++|++|++.+|++|+++++++|+++++ ++
T Consensus 325 ~~~~i~~i~~~~~---~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~-~~ 397 (402)
T TIGR01821 325 NPSHIVPVIIGDA---ALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWD-RL 397 (402)
T ss_pred CCCCEEEEEeCCH---HHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHH-Hc
Confidence 4677777755432 2467899998755 9998642 347899999999999999999999999998 65
No 91
>PRK07179 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=290.44 Aligned_cols=344 Identities=18% Similarity=0.250 Sum_probs=256.8
Q ss_pred hhcccCCCCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHcccc---CCCCC--CCcHHHH
Q 012138 48 EYSAHNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLS---SRAFY--NDKFPVF 122 (470)
Q Consensus 48 ~~~~~~~~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~---~~~~~--~~~~~~l 122 (470)
++....|.+.+++..+++|.++||.+|+.||||. +||++++++.+++++++.. +..+. .+...+|
T Consensus 35 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~YL~l~----------~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~l 104 (407)
T PRK07179 35 ERVNKNWNGKHLVLGKTPGPDAIILQSNDYLNLS----------GHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQF 104 (407)
T ss_pred HhhccCcCCceEEeecCCCCcEEEeecCCccCCC----------CCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHH
Confidence 3445567888999999999999999999999987 6899999999999876322 22222 2468899
Q ss_pred HHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCC
Q 012138 123 AERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG 202 (470)
Q Consensus 123 ~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~ 202 (470)
++.|++++|.+.+++++||++|++.+++.+.. +++ .|++.... |..........+. .
T Consensus 105 e~~la~~~g~~~~~~~~sG~~An~~~l~~l~~---------~g~-~v~~~~~~-h~s~~~~~~~~g~------------~ 161 (407)
T PRK07179 105 EKKLAAFTGFESCLLCQSGWAANVGLLQTIAD---------PNT-PVYIDFFA-HMSLWEGVRAAGA------------Q 161 (407)
T ss_pred HHHHHHHhCCCcEEEECCHHHHHHHHHHHhCC---------CCC-EEEEECCc-CHHHHHHHHHCCC------------e
Confidence 99999999999999999999999999997754 455 55554443 5444333222211 1
Q ss_pred eeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-C-CcccCCccccc
Q 012138 203 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLASD 280 (470)
Q Consensus 203 ~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g-~g~~G~~~~~~ 280 (470)
...++++|+++|+++++++ ++++|++++++||+|.+.| +++|.++|++||++||+||+|+ | +|++|..+ +.
T Consensus 162 ~~~~~~~d~~~l~~~l~~~--~~~lV~v~~v~n~tG~i~p----l~~I~~l~~~~~~~livDea~~~g~~g~~g~g~-~~ 234 (407)
T PRK07179 162 AHPFRHNDVDHLRRQIERH--GPGIIVVDSVYSTTGTIAP----LADIVDIAEEFGCVLVVDESHSLGTHGPQGAGL-VA 234 (407)
T ss_pred EEEecCCCHHHHHHHHHhc--CCeEEEECCCCCCCCcccc----HHHHHHHHHHcCCEEEEECcccccCcCCCCCch-HH
Confidence 3456678999999999753 4788889999999999998 9999999999999999999998 2 45566543 34
Q ss_pred cCCCC--ccee--eccccccCCCcceeEEEecHHHHhhcCcCCccCCC--CCCHHHHHHHHHHHHHHhh-hhHHHHHHHH
Q 012138 281 WEEVR--PDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTF--GGNPLASAVAIASLDVIRD-EKLAERSAHL 353 (470)
Q Consensus 281 ~~~~~--pdi~--s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~--~~~~~~~aaa~a~l~~~~~-~~~~~~~~~~ 353 (470)
.+++. +|++ |++|++++ ++|++++++++++.+........+ +.++..++++.++++.+.. +..+++++++
T Consensus 235 ~~~~~~~vdi~~~S~sK~~g~---~~G~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~~~~~~~~~~l~~~ 311 (407)
T PRK07179 235 ELGLTSRVHFITASLAKAFAG---RAGIITCPRELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVIESADDRRARLHAN 311 (407)
T ss_pred hcCCCCCCCEEEeechHhhhc---cCeEEEeCHHHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 45543 3765 67899864 789999999988776532111112 2345566667777887765 4578889999
Q ss_pred HHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCcee----ccC---CCCEEEEecCCCCC
Q 012138 354 GEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA----KPT---HDTIVRLTPPLSIS 426 (470)
Q Consensus 354 ~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~----~~~---~~~~iR~~~~~~~t 426 (470)
++++++.|++++. .+.+.+.++.+.+... .....+.+.|.++||.+ .|. ..+++||+++..+|
T Consensus 312 ~~~l~~~L~~~g~-------~v~~~~~i~~l~~~~~---~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t 381 (407)
T PRK07179 312 ARFLREGLSELGY-------NIRSESQIIALETGSE---RNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLT 381 (407)
T ss_pred HHHHHHHHHHcCC-------CCCCCCCEEEEEeCCH---HHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCC
Confidence 9999999987521 1235677887766432 25677888999999973 333 25799999999999
Q ss_pred HHHHHHHHHHHHHHHhccc
Q 012138 427 SNELQEGSKALHDVLELDL 445 (470)
Q Consensus 427 ~e~i~~~~~~l~~~l~~~~ 445 (470)
++|+++++++|+++++ +.
T Consensus 382 ~edi~~~~~~l~~~~~-~~ 399 (407)
T PRK07179 382 ASDLDRVLEVCREARD-EV 399 (407)
T ss_pred HHHHHHHHHHHHHHHH-hh
Confidence 9999999999999998 64
No 92
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=100.00 E-value=1.8e-34 Score=279.50 Aligned_cols=329 Identities=22% Similarity=0.333 Sum_probs=262.3
Q ss_pred CCEEEeCCCCeEEeccCC-cccccCCCCCHHHHHHHHHHHHHccccCC-----CCCCCcHHHHHHHHhhhhCCCeEEecC
Q 012138 66 GSSIWDPEGNKYLDFLSA-YSAVNQGHCHPKIMKALQEQAEKLTLSSR-----AFYNDKFPVFAERLTSMFGYDMVLPMN 139 (470)
Q Consensus 66 g~~~~d~~G~~~lD~~~~-~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~~~l~~~~~~~~v~~~~ 139 (470)
+..++ .+|++++||+++ |.+.. .||++++++.+.+++++.+.. ..+.+.+.+|+++|++++|.+.+++++
T Consensus 31 ~~~~~-~~~~~~~nf~SNdYLGLa---~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e~al~f~ 106 (388)
T COG0156 31 GLAIR-ADGRKVLNFCSNDYLGLA---SHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGAEAALLFS 106 (388)
T ss_pred Cccee-cCCceeEeeeccCccccc---CCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCcEEEEc
Confidence 44444 558999999988 44433 799999999999998755432 235788999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHH
Q 012138 140 TGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFK 219 (470)
Q Consensus 140 sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~ 219 (470)
||..||..++..+.. .++.|+...-+ |.+...++.++... ...++|||+++||+.++
T Consensus 107 SGy~AN~~~i~~l~~----------~~dli~~D~ln-HASiidG~rls~a~------------~~~f~HnD~~~Le~~l~ 163 (388)
T COG0156 107 SGFVANLGLLSALLK----------KGDLIFSDELN-HASIIDGIRLSRAE------------VRRFKHNDLDHLEALLE 163 (388)
T ss_pred ccchhHHHHHHHhcC----------CCcEEEEechh-hhhHHHHHHhCCCc------------EEEecCCCHHHHHHHHH
Confidence 999999999998764 23355555555 99988888877633 46899999999999998
Q ss_pred hcC--C-CeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-C-CcccCCccccccCCCCcc---e--e
Q 012138 220 ESG--D-QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLASDWEEVRPD---M--V 289 (470)
Q Consensus 220 ~~~--~-~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g-~g~~G~~~~~~~~~~~pd---i--~ 289 (470)
++. . +.+.|++|.++++.|++.| |++|.++|++||++|++||+|+ | +|..|+++ .+++|+.++ + .
T Consensus 164 ~~~~~~~~~~~IvtegVfSMdGdiAp----L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~-~e~~g~~~~~vdi~~g 238 (388)
T COG0156 164 EARENGARRKLIVTEGVFSMDGDIAP----LPELVELAEKYGALLYVDEAHAVGVLGPNGRGL-AEHFGLEPEEVDIIVG 238 (388)
T ss_pred hhhccCCCceEEEEeccccCCCCcCC----HHHHHHHHHHhCcEEEEEccccccccCCCCccH-HHHhCCCCccceEEEE
Confidence 742 1 3578889999999999999 9999999999999999999999 5 67788876 566777543 3 3
Q ss_pred ecccccc--CCCcceeEEEecHHHHhhcCcCCccCCCC--CCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHH
Q 012138 290 ILGKALG--GGVIPVSAVLADKEVMLCIQPGEHGSTFG--GNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKI 364 (470)
Q Consensus 290 s~sK~l~--gG~~~ig~v~~~~~~~~~~~~~~~~~t~~--~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l 364 (470)
||||++| ||+ ++++..+++.+........|+ .+|..++++.++++.+++ ++.+++++++..++++.+...
T Consensus 239 TlsKAlGs~Gg~-----v~g~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~ 313 (388)
T COG0156 239 TLGKALGSSGGY-----IAGSAALIDYLRNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKAL 313 (388)
T ss_pred EchhhhcccCce-----eeCcHHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999 554 899999999998765555555 788888899999999886 678888999999888555543
Q ss_pred HhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceecc-------CCCCEEEEecCCCCCHHHHHHHHHHH
Q 012138 365 QQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP-------THDTIVRLTPPLSISSNELQEGSKAL 437 (470)
Q Consensus 365 ~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~-------~~~~~iR~~~~~~~t~e~i~~~~~~l 437 (470)
+ +........++.+.+..+. .+.++...|+++||.+.+ .+...+|++++..+|+++|+.+++.|
T Consensus 314 ~------~~~~~s~s~I~pv~~gd~~---~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l 384 (388)
T COG0156 314 G------LVLLPSESPIIPVILGDEE---RALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEAL 384 (388)
T ss_pred C------CccCCCCCCeeeeEeCCHH---HHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHH
Confidence 2 2223445556666565543 788899999999999763 34678999999999999999999999
Q ss_pred HHH
Q 012138 438 HDV 440 (470)
Q Consensus 438 ~~~ 440 (470)
.++
T Consensus 385 ~~~ 387 (388)
T COG0156 385 SEV 387 (388)
T ss_pred Hhh
Confidence 875
No 93
>PRK09064 5-aminolevulinate synthase; Validated
Probab=100.00 E-value=7.1e-34 Score=286.27 Aligned_cols=330 Identities=20% Similarity=0.256 Sum_probs=249.6
Q ss_pred CCeEEeccCCcccccCCCC-CHHHHHHHHHHHHHccccCC---C--CCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHH
Q 012138 74 GNKYLDFLSAYSAVNQGHC-HPKIMKALQEQAEKLTLSSR---A--FYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVET 147 (470)
Q Consensus 74 G~~~lD~~~~~~~~~lG~~-~p~v~~a~~~~~~~~~~~~~---~--~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~ 147 (470)
|++++||+++ +.+|+. ||++.+++.+++++++..+. . ++++.+.++++.|+++++.+..+++++|++|++.
T Consensus 45 ~~~~~~~~s~---dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~~~~~~~~sG~~an~~ 121 (407)
T PRK09064 45 EREVTVWCSN---DYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGKEAALVFTSGYVSNDA 121 (407)
T ss_pred CceEEEEECC---CCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCCCcEEEECcHHHHHHH
Confidence 6899999887 556664 89999999999988765421 1 2456789999999999998888889999999999
Q ss_pred HHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcC-CCeE
Q 012138 148 ALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG-DQIA 226 (470)
Q Consensus 148 al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~-~~~~ 226 (470)
+++++..+ .++ .+++.+..+|+.....+...+.+ ...++++|+++|+++++... ++++
T Consensus 122 ai~~l~~~--------~~~-~~i~~~~~~h~s~~~~~~~~~~~------------~~~~~~~d~~~le~~l~~~~~~~~~ 180 (407)
T PRK09064 122 TLSTLAKL--------IPD-CVIFSDELNHASMIEGIRRSRCE------------KHIFRHNDVAHLEELLAAADPDRPK 180 (407)
T ss_pred HHHHHhCC--------CCC-CEEEEeCcchHHHHHHHHHcCCc------------EEEECCCCHHHHHHHHHhccCCCCe
Confidence 99987642 122 34444444477665555443321 24677889999999997532 3688
Q ss_pred EEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-C-CcccCCccccccCCC--Cccee--eccccccCCCc
Q 012138 227 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLASDWEEV--RPDMV--ILGKALGGGVI 300 (470)
Q Consensus 227 ~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g-~g~~G~~~~~~~~~~--~pdi~--s~sK~l~gG~~ 300 (470)
+|++++++|++|.+.| +++|.++|++||++||+||+|+ | +|+.|..+ .++.++ .+|++ ||||+++.
T Consensus 181 ~v~~~~v~s~~G~~~~----l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~-~~~~~~~~~~div~~t~sKa~g~--- 252 (407)
T PRK09064 181 LIAFESVYSMDGDIAP----IAEICDLADKYNALTYLDEVHAVGMYGPRGGGI-AERDGLMDRIDIIEGTLAKAFGV--- 252 (407)
T ss_pred EEEEeCCCCCCccccC----HHHHHHHHHHcCCEEEEECCCcccccCCCCCCh-HHhcCCCCCCeEEEEecchhhhc---
Confidence 9999999999999998 9999999999999999999998 6 68887665 455554 46877 99999972
Q ss_pred ceeEEEecHHHHhhcCcCCcc--CCCCCCHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Q 012138 301 PVSAVLADKEVMLCIQPGEHG--STFGGNPLASAVAIASLDVIRDE-KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG 377 (470)
Q Consensus 301 ~ig~v~~~~~~~~~~~~~~~~--~t~~~~~~~~aaa~a~l~~~~~~-~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~ 377 (470)
..|++++++++++.+...... .+.+.++.+++++.++++.+++. ..+++++++++++.+.|++++. ..+.+
T Consensus 253 ~GG~~~~~~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g~------~~~~~ 326 (407)
T PRK09064 253 MGGYIAGSAALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAAGI------PVMPN 326 (407)
T ss_pred cCceEecCHHHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCC------CCCCC
Confidence 124588899988877543222 24457888999999999988763 4567888899999999987532 22234
Q ss_pred cceeEEEEeccCCCchhHHHHHHHHHH-cCceeccC-------CCCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 378 RGLFNAVEFDKTALPVSAYDICLKMKE-RGILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 378 ~g~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~-------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
.+.++.+.+... ..+.++.++|++ +||++.+. +.+++|++|++.+|++|+++++++|+++++ ++
T Consensus 327 ~~~iv~i~~~~~---~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~-~~ 398 (407)
T PRK09064 327 ESHIVPVMVGDP---EKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWA-RL 398 (407)
T ss_pred CCCEEEEEeCCH---HHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHH-Hc
Confidence 566766655432 257789999875 59998642 236899999999999999999999999998 65
No 94
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=100.00 E-value=2.9e-33 Score=280.17 Aligned_cols=346 Identities=22% Similarity=0.258 Sum_probs=256.4
Q ss_pred ccCCCCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCC-CCHHHHHHHHHHHHHccccCC-----CCCCCcHHHHHH
Q 012138 51 AHNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGH-CHPKIMKALQEQAEKLTLSSR-----AFYNDKFPVFAE 124 (470)
Q Consensus 51 ~~~~~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~~ 124 (470)
+..|...| ++.+++|.++|+ +|++|||+.++ .++|+ ++|++++++.++++.+..... .++.+...++++
T Consensus 17 ~~~~~~~~-~~~~~~g~~~~~-~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~ 91 (385)
T PRK05958 17 AGLYRSLR-PREGGAGRWLVV-DGRRMLNFASN---DYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEE 91 (385)
T ss_pred cCCCcccc-ccccCCCceeEe-CCceEEEeeCC---CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHH
Confidence 44565564 478999999997 99999999987 35776 789999999999987543221 123456789999
Q ss_pred HHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCee
Q 012138 125 RLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHL 204 (470)
Q Consensus 125 ~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (470)
.++++++.+..+++++|++++..+++.+.. +|+ .|++..+. |+.......+.+.. ..
T Consensus 92 ~la~~~~~~~~i~~~~g~~~~~~~l~~~~~---------~gd-~V~~~~~~-~~~~~~~~~~~g~~------------~~ 148 (385)
T PRK05958 92 ELAEWFGAERALLFSSGYAANLAVLTALAG---------KGD-LIVSDKLN-HASLIDGARLSRAR------------VR 148 (385)
T ss_pred HHHHHhCCCcEEEECcHHHHHHHHHHHhCC---------CCC-EEEEeCcc-CHHHHHHHHhcCCc------------eE
Confidence 999999877888888999999887765533 455 66666655 66655554443321 24
Q ss_pred eecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-C-CcccCCcccccc-
Q 012138 205 KVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLASDW- 281 (470)
Q Consensus 205 ~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g-~g~~G~~~~~~~- 281 (470)
.++.+|+++++++++....++++++++++++++|.+.+ +++|.++|++||++||+||+|+ | +++.|..+ ...
T Consensus 149 ~~~~~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~----l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~-~~~~ 223 (385)
T PRK05958 149 RYPHNDVDALEALLAKWRAGRALIVTESVFSMDGDLAP----LAELVALARRHGAWLLVDEAHGTGVLGPQGRGL-AAEA 223 (385)
T ss_pred EeCCCCHHHHHHHHHhccCCCeEEEEEecccCCCCcCC----HHHHHHHHHHhCCEEEEECcccccccCCCCCch-HHhh
Confidence 55667999999999764334678889999999999887 9999999999999999999996 3 44445432 111
Q ss_pred -CCCCcc---eeeccccccCCCcceeEEEecHHHHhhcCcC--CccCCCCCCHHHHHHHHHHHHHHhh-hhHHHHHHHHH
Q 012138 282 -EEVRPD---MVILGKALGGGVIPVSAVLADKEVMLCIQPG--EHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLG 354 (470)
Q Consensus 282 -~~~~pd---i~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~--~~~~t~~~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~ 354 (470)
....+| +.++||++++ +.|++++++++++.+... ....+.+.++++++++.++++.+++ +++.+++.+++
T Consensus 224 ~~~~~~~~i~~~s~sK~~~~---~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~ 300 (385)
T PRK05958 224 GLAGEPDVILVGTLGKALGS---SGAAVLGSETLIDYLINRARPFIFTTALPPAQAAAARAALRILRREPERRERLAALI 300 (385)
T ss_pred CCCCCCceEEEEechhhccc---CCcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 222345 5699999963 337788998888776432 2223345788888888899988765 46888899999
Q ss_pred HHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccC-------CCCEEEEecCCCCCH
Q 012138 355 EELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------HDTIVRLTPPLSISS 427 (470)
Q Consensus 355 ~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------~~~~iR~~~~~~~t~ 427 (470)
+++.+.|++++ +..+.+.|.++++.++.. .++.++++.|+++||.+.+. +.+++|++++..+++
T Consensus 301 ~~l~~~L~~~~------~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~ 371 (385)
T PRK05958 301 ARLRAGLRALG------FQLMDSQSAIQPLIVGDN---ERALALAAALQEQGFWVGAIRPPTVPAGTSRLRITLTAAHTE 371 (385)
T ss_pred HHHHHHHHHcC------CCcCCCCCCEEEEEeCCH---HHHHHHHHHHHHCCceEecccCCCCCCCCceEEEEecCCCCH
Confidence 99999988752 223356788888876432 26778999999999999752 246899999999999
Q ss_pred HHHHHHHHHHHHHH
Q 012138 428 NELQEGSKALHDVL 441 (470)
Q Consensus 428 e~i~~~~~~l~~~l 441 (470)
+++++++++|++++
T Consensus 372 ~~i~~~l~~l~~~~ 385 (385)
T PRK05958 372 ADIDRLLEALAEAL 385 (385)
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999998764
No 95
>PLN02955 8-amino-7-oxononanoate synthase
Probab=100.00 E-value=3.3e-33 Score=276.58 Aligned_cols=336 Identities=15% Similarity=0.149 Sum_probs=252.1
Q ss_pred CCeEEeccCC-cccccCCCCCHHHHHHHHHHHHHccccCC-----CCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHH
Q 012138 74 GNKYLDFLSA-YSAVNQGHCHPKIMKALQEQAEKLTLSSR-----AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVET 147 (470)
Q Consensus 74 G~~~lD~~~~-~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~ 147 (470)
+++++||.++ |.+.. .||++++++.+.+++++.+.. ..+...+++|++.|+++++.+.+++++||..||..
T Consensus 101 ~r~~l~FsSndYLGL~---~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~all~sSGy~AN~~ 177 (476)
T PLN02955 101 FKKLLLFSGNDYLGLS---SHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKKEDCLVCPTGFAANMA 177 (476)
T ss_pred CceEEEeeccCccCCC---CCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCCCcEEEECChHHHHHH
Confidence 5789999987 54444 799999999999999876532 12456789999999999999999999999999999
Q ss_pred HHHHHHHhch--hcccCC-CCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCC
Q 012138 148 ALKLARKWGY--VKKKFS-IDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQ 224 (470)
Q Consensus 148 al~~~~~~~~--~~~~~~-~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~ 224 (470)
++..+..... ...+.+ .++..+|+.+..-|.+...++.++....- ..++.++|||+++|++++++...+
T Consensus 178 ~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~--------a~~~~f~HND~~~Le~~L~~~~~~ 249 (476)
T PLN02955 178 AMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGN--------VEVFVYRHCDMYHLNSLLSSCKMK 249 (476)
T ss_pred HHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCC--------ceEEEeCCCCHHHHHHHHHhCCCC
Confidence 9987631000 000000 13445556666669998888776532100 124678999999999999876656
Q ss_pred eEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-C-CcccCCccccccCCCCcce----eecccccc--
Q 012138 225 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLASDWEEVRPDM----VILGKALG-- 296 (470)
Q Consensus 225 ~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g-~g~~G~~~~~~~~~~~pdi----~s~sK~l~-- 296 (470)
.++|++|+++++.|.+.| +++|.++|++||++||+||+|+ | +|.+|.+. .+++++.+|+ .||||++|
T Consensus 250 ~~~Vv~EgV~SmdGdiap----L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~-~e~~g~~~di~ii~~TLsKA~G~~ 324 (476)
T PLN02955 250 RKVVVTDSLFSMDGDFAP----MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGV-AEEFNCEADVDLCVGTLSKAAGCH 324 (476)
T ss_pred ceEEEEeCCCCCCCCcCC----HHHHHHHHHHcCcEEEEcccccCceecCCCCcH-HHHhCCCCCCcEEEEeCccchhcc
Confidence 688999999999999998 9999999999999999999998 3 56666664 5677776665 59999998
Q ss_pred CCCcceeEEEecHHHHhhcCcCCccCCCC--CCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHhhCCCceE
Q 012138 297 GGVIPVSAVLADKEVMLCIQPGEHGSTFG--GNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVK 373 (470)
Q Consensus 297 gG~~~ig~v~~~~~~~~~~~~~~~~~t~~--~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~ 373 (470)
||+ +++++++++.++.......|+ .+|..++++.++++.+.. +..+++++++.+++++.+ .+ .
T Consensus 325 GGf-----i~gs~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~~~-----G~----~ 390 (476)
T PLN02955 325 GGF-----IACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFKALS-----GV----D 390 (476)
T ss_pred Cce-----eecHHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc-----CC----C
Confidence 665 889999998887655555554 556677778888888754 456677777777776631 11 1
Q ss_pred EEeccceeEEEEeccCCCchhHHHHHHHHHHcCceecc-------CCCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccC
Q 012138 374 EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP-------THDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 374 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~-------~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
....++.+.+..+. .+..+.++|+++||++.+ .+...+||+++..||++||++++++|.++.. ...
T Consensus 391 ---~~sPI~pI~ig~~~---~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~-~~~ 463 (476)
T PLN02955 391 ---ISSPIISLVVGNQE---KALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLD-FDN 463 (476)
T ss_pred ---CCCCEEEEEeCCHH---HHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHh-hhc
Confidence 12455666555443 778899999999999762 2356799999999999999999999999887 543
No 96
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=100.00 E-value=1.6e-32 Score=274.67 Aligned_cols=344 Identities=16% Similarity=0.212 Sum_probs=251.3
Q ss_pred CceEEEeecCCEEEeCCCCeEEeccCCcccccCCC-CCHHHHHHHHHHHHHccccCC-----CCCCCcHHHHHHHHhhhh
Q 012138 57 VPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGH-CHPKIMKALQEQAEKLTLSSR-----AFYNDKFPVFAERLTSMF 130 (470)
Q Consensus 57 ~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~~~l~~~~ 130 (470)
.|.++.+++|.++| .+|++||||.++ ..+|+ ++|.+.+++.+++++...... ....+++.++++++++++
T Consensus 16 ~~~~~~~~~g~~~~-~~g~~~id~~~~---~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~ 91 (385)
T TIGR01825 16 SIRVLESAQGPRVR-VNGKEVINLSSN---NYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFK 91 (385)
T ss_pred cccccccCCCceEE-ECCceEEEeecc---CccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHh
Confidence 68889999999999 999999999876 44677 899999999999886543211 124567899999999998
Q ss_pred CCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCC
Q 012138 131 GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD 210 (470)
Q Consensus 131 ~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (470)
+.+..+++++|++++..+++.+.. +|+ .|++..+. |+.....+.+.+.. ...+++.|
T Consensus 92 g~~~~i~~~sG~~a~~~a~~~~~~---------~gd-~vi~~~~~-~~~~~~~~~~~g~~------------~~~~~~~d 148 (385)
T TIGR01825 92 KTEAALVFQSGFNTNQGVLSALLR---------KGD-IVLSDELN-HASIIDGLRLTKAT------------KKIYKHAD 148 (385)
T ss_pred CCCcEEEECcHHHHHHHHHHHhCC---------CCC-EEEEEccc-cHHHHHHHHhcCCc------------eEEeCCCC
Confidence 877767777889999988887643 455 66666655 55554444333211 12344558
Q ss_pred HHHHHHHHHhcC-CCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccC--CcccCCccccccCCCCcc
Q 012138 211 ITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG--LARSGRMLASDWEEVRPD 287 (470)
Q Consensus 211 ~~~Le~~l~~~~-~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g--~g~~G~~~~~~~~~~~pd 287 (470)
++++++.+++.. .++++|++++++|++|.+.| +++|.++|++||+++|+||+|+. +++.|.. ...++++.+|
T Consensus 149 ~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~----~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~ 223 (385)
T TIGR01825 149 MDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAP----LPEIVELAERYGAVTYVDDAHGSGVMGEAGRG-TVHHFGLEDK 223 (385)
T ss_pred HHHHHHHHHhhccCCCeEEEEecCCcCCCCccC----HHHHHHHHHHhCCEEEEECcccccCcCCCCCc-cHhhcCCCcC
Confidence 999999887643 36889999999999999998 99999999999999999999973 4444432 1223333333
Q ss_pred ----eeeccccccCCCcceeEEEecHHHHhhcCcCCccCC--CCCCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHH
Q 012138 288 ----MVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGST--FGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQH 360 (470)
Q Consensus 288 ----i~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t--~~~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~~l~~~ 360 (470)
+.+|||++++ +.|++++++++++.+........ ...+++.++++.++++.+.+ .+..++++++++++.+.
T Consensus 224 ~~i~~~s~sK~~~~---~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~ 300 (385)
T TIGR01825 224 VDIQVGTLSKAIGV---VGGYAAGHKELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAG 300 (385)
T ss_pred CcEEEEeccHHhhc---CCCEEecCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 4699999962 44778899998888754322122 23567788888888887654 45778888889999998
Q ss_pred HHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceecc-------CCCCEEEEecCCCCCHHHHHHH
Q 012138 361 LFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP-------THDTIVRLTPPLSISSNELQEG 433 (470)
Q Consensus 361 L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~-------~~~~~iR~~~~~~~t~e~i~~~ 433 (470)
|++++. ....+.+.++.+.+... .+..++++.|+++||.+.+ .+.+++|++|++.+++++++++
T Consensus 301 L~~~g~------~~~~~~~~~~~~~~~~~---~~~~~~~~~L~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~ 371 (385)
T TIGR01825 301 LGKLGY------DTGGSETPITPVVIGDE---KAAQEFSRRLFDEGIFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQA 371 (385)
T ss_pred HHHcCC------CCCCCCCCEEEEEECCH---HHHHHHHHHHHHCCcEEcccCCCCCCCCCceEEEEEcCCCCHHHHHHH
Confidence 887532 12234455565544321 2567899999999998842 1347899999999999999999
Q ss_pred HHHHHHHHhccc
Q 012138 434 SKALHDVLELDL 445 (470)
Q Consensus 434 ~~~l~~~l~~~~ 445 (470)
+++|+++++ ++
T Consensus 372 ~~~l~~~~~-~~ 382 (385)
T TIGR01825 372 LDAYEKVGK-EL 382 (385)
T ss_pred HHHHHHHHH-Hh
Confidence 999999988 64
No 97
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=100.00 E-value=2.4e-32 Score=274.14 Aligned_cols=350 Identities=19% Similarity=0.269 Sum_probs=253.9
Q ss_pred CCCCCceEEEeecCCEEEeCCCCeEEeccCCcccccCCC-CCHHHHHHHHHHHHHccccC--CC---CCCCcHHHHHHHH
Q 012138 53 NYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGH-CHPKIMKALQEQAEKLTLSS--RA---FYNDKFPVFAERL 126 (470)
Q Consensus 53 ~~~~~p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~--~~---~~~~~~~~l~~~l 126 (470)
...+.|..+.++.|.++++.+|+++|||.++ ..+|+ .+|++++++.++++..+..+ .. ...+.+.++++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~---~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~i 92 (393)
T TIGR01822 16 GLFKSERIITSPQGADIRVADGREVLNFCAN---NYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKI 92 (393)
T ss_pred CCCCcccccccCCCceEEecCCceEEEeeCC---CccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHH
Confidence 3344677788999999999899999999988 44555 48999999999998753321 11 1234568899999
Q ss_pred hhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeee
Q 012138 127 TSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKV 206 (470)
Q Consensus 127 ~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (470)
+++++.+.+++++||++|+..++..+.. +|+ .|++..+.|+. ....+.+.+.. ...+
T Consensus 93 a~~~g~~~~ii~~~~~~a~~~~~~~l~~---------~gd-~vi~~~~~~~s-~~~~~~~~~~~------------~~~~ 149 (393)
T TIGR01822 93 AAFLGTEDTILYASCFDANGGLFETLLG---------AED-AIISDALNHAS-IIDGVRLCKAK------------RYRY 149 (393)
T ss_pred HHHhCCCcEEEECchHHHHHHHHHHhCC---------CCC-EEEEeccccHH-HHHHHHhcCCc------------eEEe
Confidence 9999988888889999999988876643 465 67777777543 33333322211 1344
Q ss_pred cCCCHHHHHHHHHhc---CCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-CC-cccCCcccccc
Q 012138 207 DFGDITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GL-ARSGRMLASDW 281 (470)
Q Consensus 207 ~~~d~~~Le~~l~~~---~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g~-g~~G~~~~~~~ 281 (470)
+++|+++|++.+++. +.++++|++++++|++|.+.| +++|.++|++||++||+||+|+ |+ +..|... .+.
T Consensus 150 ~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~----l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~-~~~ 224 (393)
T TIGR01822 150 ANNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAP----LDEICDLADKYDALVMVDECHATGFLGPTGRGS-HEL 224 (393)
T ss_pred CCCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCC----HHHHHHHHHHcCCEEEEECCccccCcCCCCCch-HHh
Confidence 567999999999863 126888999989999999998 9999999999999999999996 42 3333321 122
Q ss_pred CCC--Cccee--eccccccCCCcceeEEEecHHHHhhcCcCCccCCCC--CCHHHHHHHHHHHHHHhh-hhHHHHHHHHH
Q 012138 282 EEV--RPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG--GNPLASAVAIASLDVIRD-EKLAERSAHLG 354 (470)
Q Consensus 282 ~~~--~pdi~--s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~--~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~ 354 (470)
.++ .+|++ ++||+++| + ++|++++++++++.+........++ .++..++++.++++.++. +++++++++++
T Consensus 225 ~~~~~~~di~~~s~sK~l~g-~-r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~ 302 (393)
T TIGR01822 225 CGVMGRVDIITGTLGKALGG-A-SGGFTTARKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANT 302 (393)
T ss_pred cCCCCCCeEEEEEChHHhhC-C-CcEEEEeCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 332 34665 88999875 5 8999999999988776432222333 356666777888887654 56788899999
Q ss_pred HHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccC-------CCCEEEEecCCCCCH
Q 012138 355 EELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------HDTIVRLTPPLSISS 427 (470)
Q Consensus 355 ~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------~~~~iR~~~~~~~t~ 427 (470)
+++.+.|++++ +....+.+.++.+.+... ..+.++++.|.++||.+... +...+|++++..+|+
T Consensus 303 ~~l~~~L~~~g------~~~~~~~~~~~~i~~~~~---~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~iRis~~~~~t~ 373 (393)
T TIGR01822 303 RYFRERMEAAG------FDIKPADHPIIPVMLYDA---VLAQRFARRLLEEGIYVTGFFYPVVPKGQARIRVQISAAHTE 373 (393)
T ss_pred HHHHHHHHHcC------CCCCCCCCCEEEEEeCCH---HHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEECCCCCH
Confidence 99999887742 111223455555544322 25778999999999988621 235799999999999
Q ss_pred HHHHHHHHHHHHHHhccc
Q 012138 428 NELQEGSKALHDVLELDL 445 (470)
Q Consensus 428 e~i~~~~~~l~~~l~~~~ 445 (470)
++|++++++|.++++ ++
T Consensus 374 edi~~~~~~l~~~~~-~~ 390 (393)
T TIGR01822 374 EQLDRAVEAFTRIGR-EL 390 (393)
T ss_pred HHHHHHHHHHHHHHH-Hh
Confidence 999999999999887 54
No 98
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=100.00 E-value=8.8e-33 Score=275.22 Aligned_cols=333 Identities=17% Similarity=0.246 Sum_probs=247.0
Q ss_pred EeccCC-cccccCCCCCHHHHHHHHHHHHHccccC---CCC--CCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHH
Q 012138 78 LDFLSA-YSAVNQGHCHPKIMKALQEQAEKLTLSS---RAF--YNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKL 151 (470)
Q Consensus 78 lD~~~~-~~~~~lG~~~p~v~~a~~~~~~~~~~~~---~~~--~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~ 151 (470)
|||.++ |.+.. .||++++++.+++++++.++ +.+ ....+.+|+++++++++.+..+++++|+.|+..++..
T Consensus 1 ~~f~s~dyLgl~---~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e~al~~~sG~~a~~~~i~~ 77 (392)
T PLN03227 1 LNFATHDFLSTS---SSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGTESAILYSDGASTTSSTVAA 77 (392)
T ss_pred CCCcCcCccCCC---CCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHH
Confidence 356554 44333 78999999999998865443 222 2346889999999999988999999999999988877
Q ss_pred HHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhc----------
Q 012138 152 ARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKES---------- 221 (470)
Q Consensus 152 ~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~---------- 221 (470)
+.+ +|+ .|++.+.. |+++...+.+.. ..+..++|+|++++++.++..
T Consensus 78 l~~---------~GD-~Vl~~~~~-h~s~~~~~~l~~------------~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~~ 134 (392)
T PLN03227 78 FAK---------RGD-LLVVDRGV-NEALLVGVSLSR------------ANVRWFRHNDMKDLRRVLEQVRAQDVALKRK 134 (392)
T ss_pred hCC---------CCC-EEEEeccc-cHHHHHHHHHcC------------CeEEEeCCCCHHHHHHHHHHhhhhccccccc
Confidence 643 455 77777777 555554433332 123567888888888766432
Q ss_pred -CCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc--CCcccCCccccccCCCCc----ceeecccc
Q 012138 222 -GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS--GLARSGRMLASDWEEVRP----DMVILGKA 294 (470)
Q Consensus 222 -~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~--g~g~~G~~~~~~~~~~~p----di~s~sK~ 294 (470)
..++++|++|+++|++|.+.| +++|+++|++||+++|+||+|+ .+|++|+ +..+++++.| |++++|++
T Consensus 135 ~~~~t~~vi~E~v~~~~G~i~~----l~~i~~l~~~~g~~livDe~~~~g~~g~~G~-g~~~~~g~~p~~~~Div~~sls 209 (392)
T PLN03227 135 PTDQRRFLVVEGLYKNTGTLAP----LKELVALKEEFHYRLILDESFSFGTLGKSGR-GSLEHAGLKPMVHAEIVTFSLE 209 (392)
T ss_pred cCCCcEEEEEcCCcCCCCcccC----HHHHHHHHHHcCCEEEEECcccccccCCCCC-cHHHHcCCCCCCCceEEEeech
Confidence 135789999999999999998 9999999999999999999998 3566666 4578899988 98876643
Q ss_pred ccCCCcceeEEEecHHHHhhcCcCCccCCCCCC--HHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHHHHHHHHhhCCCc
Q 012138 295 LGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGN--PLASAVAIASLDV-IRDEKLAERSAHLGEELRQHLFKIQQQFPNY 371 (470)
Q Consensus 295 l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~--~~~~aaa~a~l~~-~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~ 371 (470)
-+.|. ..|++++++++++.++...++.+|+++ |+.++++.++++. ++++++.++++++++++++.|++. .+| .
T Consensus 210 k~~g~-~gg~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~--~~~-~ 285 (392)
T PLN03227 210 NAFGS-VGGMTVGSEEVVDHQRLSGSGYCFSASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNS--SHP-Y 285 (392)
T ss_pred hhhhc-cCcEEecCHHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc--CCc-c
Confidence 33333 556788999998877666677788765 7777777777755 455779999999999999999872 333 4
Q ss_pred eEEEec--------cceeEEEEeccCCCc------hhHHHHHHHHHHcCceeccC-----------CCCEEEEecCCCCC
Q 012138 372 VKEVRG--------RGLFNAVEFDKTALP------VSAYDICLKMKERGILAKPT-----------HDTIVRLTPPLSIS 426 (470)
Q Consensus 372 ~~~~~~--------~g~~~~~~~~~~~~~------~~~~~~~~~l~~~Gv~~~~~-----------~~~~iR~~~~~~~t 426 (470)
+.++++ .|.++.+++...... ....++++.|+++|+++.+. .+..+|++++..+|
T Consensus 286 ~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t 365 (392)
T PLN03227 286 ALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHT 365 (392)
T ss_pred ccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCC
Confidence 555555 355788877442100 01358899999999988532 14568999999999
Q ss_pred HHHHHHHHHHHHHHHhcccC
Q 012138 427 SNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 427 ~e~i~~~~~~l~~~l~~~~~ 446 (470)
+|||++++++|+++++ ++.
T Consensus 366 ~eei~~~~~~l~~~~~-~~~ 384 (392)
T PLN03227 366 REDIDKLLTVLGEAVE-AIL 384 (392)
T ss_pred HHHHHHHHHHHHHHHH-HHH
Confidence 9999999999999998 753
No 99
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=9.5e-33 Score=273.31 Aligned_cols=336 Identities=18% Similarity=0.199 Sum_probs=252.9
Q ss_pred CeEEeccCCcccccCCCCCHHHHHHHHHHHHHcc--ccCCCCCCCcHHHHHHHHhhhhC----CCe-EEecCChhHHHHH
Q 012138 75 NKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLT--LSSRAFYNDKFPVFAERLTSMFG----YDM-VLPMNTGAEGVET 147 (470)
Q Consensus 75 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~----~~~-v~~~~sGteA~~~ 147 (470)
..+||+..| .+....++.+.+++.+++.... +++.....++++.+++++.+.++ .++ |++|+|+++|+..
T Consensus 28 ~~vi~l~iG---~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~ 104 (393)
T COG0436 28 EDVIDLSIG---EPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFL 104 (393)
T ss_pred CCEEEeCCC---CCCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHH
Confidence 468888888 4555588999999999998763 33333456677888888887765 234 9999999999999
Q ss_pred HHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCC--CeeeecCCCHHHHHHHHHhcCCCe
Q 012138 148 ALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLP--GHLKVDFGDITALEKIFKESGDQI 225 (470)
Q Consensus 148 al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~Le~~l~~~~~~~ 225 (470)
++.++.. +|| .|++.+|.|..........++.+... ++.. +.+.. |+++|++++++ +|
T Consensus 105 ~~~a~~~---------pGD-eVlip~P~Y~~y~~~~~~~gg~~v~v----~l~~~~~~f~~---d~~~l~~~i~~---kt 164 (393)
T COG0436 105 AFLALLN---------PGD-EVLIPDPGYPSYEAAVKLAGGKPVPV----PLDEEENGFKP---DLEDLEAAITP---KT 164 (393)
T ss_pred HHHHhcC---------CCC-EEEEeCCCCcCHHHHHHhcCCEEEEE----eCCcCccCCcC---CHHHHHhhcCc---cc
Confidence 9998876 566 68889999966655554444433221 1100 11222 89999999987 89
Q ss_pred EEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCC-ccc-cccCC---CCcceeecccccc-CCC
Q 012138 226 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLA-SDWEE---VRPDMVILGKALG-GGV 299 (470)
Q Consensus 226 ~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~-~~~-~~~~~---~~pdi~s~sK~l~-gG~ 299 (470)
++|+++.++||||.++ +++++++|+++|++||++||+||+|.+|.+.|. ... .+..+ ....+-+|||.++ .|+
T Consensus 165 k~i~ln~P~NPTGav~-~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGw 243 (393)
T COG0436 165 KAIILNSPNNPTGAVY-SKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGW 243 (393)
T ss_pred eEEEEeCCCCCcCcCC-CHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEeccccccccccc
Confidence 9999877799999999 999999999999999999999999999988884 321 22221 1122348999999 899
Q ss_pred cceeEEEec-HHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh----hhHHHHHHHHHHHHHHHHHHHHhhCCCceEE
Q 012138 300 IPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD----EKLAERSAHLGEELRQHLFKIQQQFPNYVKE 374 (470)
Q Consensus 300 ~~ig~v~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~----~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~ 374 (470)
|+||++++ +++++.+.......+++.+.+++.++.++|+.-++ +..++.++++++.+.+.|.++. .+..
T Consensus 244 -RvG~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~-----g~~~ 317 (393)
T COG0436 244 -RIGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIG-----GLSV 317 (393)
T ss_pred -ceeEeecChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcC-----Ceee
Confidence 99999998 88888876555666778899999999999985421 3344567778888888887752 3555
Q ss_pred Ee-ccceeEEEEeccCCCchhHHHHHHHHHHc-CceeccCC-------CCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 375 VR-GRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPTH-------DTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 375 ~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~-------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
.. +.|.|+.| ++.+. ..++.+|+.+|+++ ||.+.|+. .+++||+ +..+++++++++++|.+++. ..
T Consensus 318 ~~~p~Ga~Y~~-~~i~~-~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis--~~~~~~~l~~a~~rl~~~~~-~~ 392 (393)
T COG0436 318 VKPPEGAFYLF-PKIPE-LLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLS--LATSEETLEEALRRLARFLA-EY 392 (393)
T ss_pred ccCCCeeEEEE-eecCC-CCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEE--EecCHHHHHHHHHHHHHHHH-hc
Confidence 55 77888888 33332 13788999999877 89999862 4799999 77888999999999999987 53
No 100
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=100.00 E-value=7.3e-32 Score=271.16 Aligned_cols=345 Identities=19% Similarity=0.254 Sum_probs=250.5
Q ss_pred ceEEEeecCCEEEeCCCCeEEeccCCcccccCCC-CCHHHHHHHHHHHHHccccCC-----CCCCCcHHHHHHHHhhhhC
Q 012138 58 PIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGH-CHPKIMKALQEQAEKLTLSSR-----AFYNDKFPVFAERLTSMFG 131 (470)
Q Consensus 58 p~~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~~~l~~~~~ 131 (470)
+..+++++|.++||.+|+.+|||.++ .++|+ .+|++.+++.++++...+... ....+++.+++++++++++
T Consensus 25 ~~~~~~~~~~~~~~~~g~~~i~l~~~---~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g 101 (397)
T PRK06939 25 ERVITSPQGADITVADGKEVINFCAN---NYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLG 101 (397)
T ss_pred cccccCCCCceEEecCCCeEEEeecc---CccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhC
Confidence 45678999999999999999999886 33566 689999999999987543221 1234677899999999988
Q ss_pred CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCH
Q 012138 132 YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDI 211 (470)
Q Consensus 132 ~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (470)
.+..+++++|++++..+++.+.. +|+ .|++.++.|.+..... ...+. ....++++|+
T Consensus 102 ~~~~i~~tsG~~a~~~~~~~l~~---------~gd-~vi~~~~~~~~~~~~~-~~~~~------------~~~~~~~~d~ 158 (397)
T PRK06939 102 TEDAILYSSCFDANGGLFETLLG---------KED-AIISDALNHASIIDGV-RLCKA------------KRYRYANNDM 158 (397)
T ss_pred CCcEEEEcChHHHHHHHHHHhCC---------CCC-EEEEEhhhhHHHHHHH-HhcCC------------ceEEeCCCCH
Confidence 76666666679999998876643 455 7888888865443322 22111 1244556799
Q ss_pred HHHHHHHHhc---CCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-CC-cccCCccccccCCC--
Q 012138 212 TALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GL-ARSGRMLASDWEEV-- 284 (470)
Q Consensus 212 ~~Le~~l~~~---~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g~-g~~G~~~~~~~~~~-- 284 (470)
+++++.+++. +.++++|++++++|++|.+.+ +++|.++|++||++||+||+|+ |+ +..|.. .....++
T Consensus 159 ~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~----~~~l~~la~~~~~~li~De~~~~g~~~~~~~~-~~~~~~~~~ 233 (397)
T PRK06939 159 ADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP----LPEICDLADKYDALVMVDDSHAVGFVGENGRG-TVEHFGVMD 233 (397)
T ss_pred HHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC----HHHHHHHHHHhCCEEEEECcccccCcCCCCCC-HHHHcCCCC
Confidence 9999988752 236788888889999999877 9999999999999999999996 43 333332 1222333
Q ss_pred Cccee--eccccccCCCcceeEEEecHHHHhhcCcCCccCCC--CCCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHH
Q 012138 285 RPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTF--GGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQ 359 (470)
Q Consensus 285 ~pdi~--s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~--~~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~~l~~ 359 (470)
.+|++ +|||+++| . ++||+++++++++.+........+ +.++..++++.++++.+.+ ++++++++++++++.+
T Consensus 234 ~~~i~~~S~sK~~~g-~-r~G~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~ 311 (397)
T PRK06939 234 RVDIITGTLGKALGG-A-SGGYTAGRKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFRE 311 (397)
T ss_pred CCcEEEEECHHHhCc-c-CceEEEeCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 34666 99999964 4 899999999998887643222222 2456667777788887754 4678888889999999
Q ss_pred HHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccC-------CCCEEEEecCCCCCHHHHHH
Q 012138 360 HLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------HDTIVRLTPPLSISSNELQE 432 (470)
Q Consensus 360 ~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------~~~~iR~~~~~~~t~e~i~~ 432 (470)
.|++++. ....+.+.++.+.+... .+..++++.|.++||.+.+. +.+++|++++..++++++++
T Consensus 312 ~L~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~~~~L~~~gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~ 382 (397)
T PRK06939 312 GMTAAGF------TLGPGEHPIIPVMLGDA---KLAQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDR 382 (397)
T ss_pred HHHHcCC------CcCCCCCCEEEEEECCH---HHHHHHHHHHHHCCceEeeeCCCCCCCCCceEEEEECCCCCHHHHHH
Confidence 8877521 12234566665544321 25778999999999988642 24689999988899999999
Q ss_pred HHHHHHHHHhccc
Q 012138 433 GSKALHDVLELDL 445 (470)
Q Consensus 433 ~~~~l~~~l~~~~ 445 (470)
++++|+++++ ++
T Consensus 383 ~l~~L~~~~~-~~ 394 (397)
T PRK06939 383 AIDAFEKVGK-EL 394 (397)
T ss_pred HHHHHHHHHH-Hh
Confidence 9999999988 65
No 101
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=1e-30 Score=263.41 Aligned_cols=332 Identities=20% Similarity=0.269 Sum_probs=241.0
Q ss_pred CCCeEEeccCC-cccccCCCCCHHHHHHHHHHHHHccccCC---CC--CCCcHHHHHHHHhhhhCCCeEEecCChhHHHH
Q 012138 73 EGNKYLDFLSA-YSAVNQGHCHPKIMKALQEQAEKLTLSSR---AF--YNDKFPVFAERLTSMFGYDMVLPMNTGAEGVE 146 (470)
Q Consensus 73 ~G~~~lD~~~~-~~~~~lG~~~p~v~~a~~~~~~~~~~~~~---~~--~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~ 146 (470)
+|+++++|.++ |.+ ++ +||++++++.++++.++.... .+ ..+.+.+|++++++++|.+..++++||++|+.
T Consensus 44 ~~~~~~~~~sn~yl~--l~-~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~~~~i~~~sG~~a~~ 120 (410)
T PRK13392 44 GPRRVTIWCSNDYLG--MG-QHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGKESALLFTSGYVSND 120 (410)
T ss_pred CCceEEEEECCCccC--CC-CCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCCCCEEEECcHHHHHH
Confidence 47889999876 433 33 789999999999988765321 12 23368899999999999888888889999999
Q ss_pred HHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcC-CCe
Q 012138 147 TALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG-DQI 225 (470)
Q Consensus 147 ~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~-~~~ 225 (470)
.++..+... .+++ .|+. +..+|++........+.. +..++++|.+++++.+++.. +++
T Consensus 121 ~~i~~l~~~-------~~g~-~vi~-~~~~h~s~~~~~~~~g~~------------~~~~~~~d~~~l~~~l~~~~~~~t 179 (410)
T PRK13392 121 AALSTLGKL-------LPGC-VILS-DALNHASMIEGIRRSGAE------------KQVFRHNDLADLEEQLASVDPDRP 179 (410)
T ss_pred HHHHHHhcC-------CCCC-EEEE-ehhhhHHHHHHHHHcCCe------------EEEEeCCCHHHHHHHHHhccCCCC
Confidence 999855421 0343 4444 445687776655444321 23456778888988887543 478
Q ss_pred EEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-C-CcccCCccccccCCC--Cccee--eccccccCCC
Q 012138 226 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLASDWEEV--RPDMV--ILGKALGGGV 299 (470)
Q Consensus 226 ~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g-~g~~G~~~~~~~~~~--~pdi~--s~sK~l~gG~ 299 (470)
++|++++++||+|.+.| +++|.++|++||+++|+||+|+ | +|..|..+ .++.++ .+|++ +|||+++.
T Consensus 180 ~~v~i~~~~n~tG~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~-~~~~~~~~~~div~~tlsK~~g~-- 252 (410)
T PRK13392 180 KLIAFESVYSMDGDIAP----IEAICDLADRYNALTYVDEVHAVGLYGARGGGI-AERDGLMDRIDMIQGTLAKAFGC-- 252 (410)
T ss_pred EEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEECCccccCcCCCCCch-hhhccCCCCCcEEEEEChHhhhc--
Confidence 89999999999999998 9999999999999999999999 5 45665544 233333 35665 99999873
Q ss_pred cceeEEEecHHHHhhcCcCCcc--CCCCCCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEe
Q 012138 300 IPVSAVLADKEVMLCIQPGEHG--STFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR 376 (470)
Q Consensus 300 ~~ig~v~~~~~~~~~~~~~~~~--~t~~~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~ 376 (470)
..|++++++++++.++..... .+.+.++++++++.++|+.++. ....++++++++++++.|++++ +....
T Consensus 253 -~GG~~~~~~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g------~~~~~ 325 (410)
T PRK13392 253 -LGGYIAASADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNANG------IPVMP 325 (410)
T ss_pred -ccchhhcCHHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC------CCCCC
Confidence 225678899998866543322 2344677888999999987765 3355667788888888887753 22224
Q ss_pred ccceeEEEEeccCCCchhHHHHHHHHH-HcCceeccC-------CCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccC
Q 012138 377 GRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 377 ~~g~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
+.+.++.+.+..+ ....+++++|+ ++||++.+. +..++|++++..+|++|+++++++|.++++ ++.
T Consensus 326 ~~~~~~~i~~~~~---~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~-~~~ 399 (410)
T PRK13392 326 SPSHIVPVMVGDP---TLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWD-RLE 399 (410)
T ss_pred CCCCEEEEEeCCH---HHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHH-HcC
Confidence 5666665545422 24678999987 579998753 246899999999999999999999999988 653
No 102
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.98 E-value=5.4e-30 Score=254.08 Aligned_cols=334 Identities=19% Similarity=0.255 Sum_probs=239.9
Q ss_pred EEeecCCEEEeCCCCeEEeccCCcccccCCC-CCHHHHHHHHHHHHHccccCC-----CCCCCcHHHHHHHHhhhhCCCe
Q 012138 61 FSQAKGSSIWDPEGNKYLDFLSAYSAVNQGH-CHPKIMKALQEQAEKLTLSSR-----AFYNDKFPVFAERLTSMFGYDM 134 (470)
Q Consensus 61 ~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~~~l~~~~~~~~ 134 (470)
+.++.|.++. .+|++||||.++ .++|+ .||++++++.++++.+..... ..+.+...++++.++++++.+.
T Consensus 3 ~~~~~~~~~~-~~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~ 78 (360)
T TIGR00858 3 LDRGPGPEVV-RDGRRLLNFSSN---DYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGTEA 78 (360)
T ss_pred cccCCCCeEE-ECCceEEecccC---CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCC
Confidence 3678899998 799999999998 56885 789999999999987543211 1124567789999999888766
Q ss_pred EEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHH
Q 012138 135 VLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITAL 214 (470)
Q Consensus 135 v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~L 214 (470)
.+++++|++++..+++.+.. +|+ .|++..+. |..........+. .+..++..|+++|
T Consensus 79 ~i~~~~G~~~~~~~l~~~~~---------~gd-~v~~~~~~-~~~~~~~~~~~g~------------~~~~~~~~d~~~l 135 (360)
T TIGR00858 79 ALLFSSGYLANVGVISALVG---------KGD-LILSDALN-HASLIDGCRLSGA------------RVRRYRHNDVEHL 135 (360)
T ss_pred EEEECchHHHHHHHHHHhCC---------CCC-EEEEEccc-cHHHHHHHHhcCC------------ceEEecCCCHHHH
Confidence 77777788888877776533 455 67767666 4444333333221 1234555699999
Q ss_pred HHHHHhcC-CCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccC--CcccCCccccccCCCCcc----
Q 012138 215 EKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG--LARSGRMLASDWEEVRPD---- 287 (470)
Q Consensus 215 e~~l~~~~-~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g--~g~~G~~~~~~~~~~~pd---- 287 (470)
++.+++.. .++++|++++++|++|.+.+ +++|.++|++||++||+||+|+. ++..+... ...+++.++
T Consensus 136 ~~~~~~~~~~~~~~v~~~~~~~~~G~~~~----~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~~~i 210 (360)
T TIGR00858 136 ERLLEKNRGERRKLIVTDGVFSMDGDIAP----LPQLVALAERYGAWLMVDDAHGTGVLGEDGRGT-LEHFGLKPEPVDI 210 (360)
T ss_pred HHHHHHcccCCCeEEEEeCCccCCCCCcC----HHHHHHHHHHcCcEEEEECcccccCcCCCCCch-HHhcCCCccCCcE
Confidence 99997642 35788888888999999987 99999999999999999999972 22222211 223344333
Q ss_pred -eeeccccccCCCcceeEEEecHHHHhhcCcCCcc--CCCCCCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHH
Q 012138 288 -MVILGKALGGGVIPVSAVLADKEVMLCIQPGEHG--STFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFK 363 (470)
Q Consensus 288 -i~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~--~t~~~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~ 363 (470)
+.+|||++++ +.|++++++++++.+...... .+.+.++.+++++.++++.+.. +++.++++++++++.+.|++
T Consensus 211 ~i~s~sK~~~~---~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~ 287 (360)
T TIGR00858 211 QVGTLSKALGS---YGAYVAGSQALIDYLINRARTLIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEA 287 (360)
T ss_pred EEEechhhhhc---cCcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Confidence 5699999974 337889999988876432222 2234667777888888887654 46788899999999999987
Q ss_pred HHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccC-------CCCEEEEecCCCCCHHHHHHHHHH
Q 012138 364 IQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------HDTIVRLTPPLSISSNELQEGSKA 436 (470)
Q Consensus 364 l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------~~~~iR~~~~~~~t~e~i~~~~~~ 436 (470)
+. +....+.+.++++.+... .+..++.++|.++||++.+. +.+++|++++..++++++++++++
T Consensus 288 ~~------~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~ 358 (360)
T TIGR00858 288 LG------FTLMPSCTPIVPVIIGDN---ASALALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEA 358 (360)
T ss_pred cC------CccCCCCCCEEEEEeCCH---HHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHh
Confidence 52 222234566777765432 25778999999999999642 246899999999999999999998
Q ss_pred HH
Q 012138 437 LH 438 (470)
Q Consensus 437 l~ 438 (470)
|+
T Consensus 359 l~ 360 (360)
T TIGR00858 359 LK 360 (360)
T ss_pred hC
Confidence 73
No 103
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.97 E-value=3.7e-29 Score=233.22 Aligned_cols=354 Identities=18% Similarity=0.252 Sum_probs=259.1
Q ss_pred EeecCCEEEeCCC-CeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCC----CeEE
Q 012138 62 SQAKGSSIWDPEG-NKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGY----DMVL 136 (470)
Q Consensus 62 ~~~~g~~~~d~~G-~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~----~~v~ 136 (470)
+++..+..||..+ ++ |...-|.+.+....+|.|.+|+.+.++..-+++.....++..++.+|.++.+++ +.++
T Consensus 10 r~~t~s~KWd~~~g~~--DvlPmWVADMDf~~pp~i~~Al~~rvdhGvfGY~~~~~~~~~ai~~w~~~r~~~~i~~e~i~ 87 (388)
T COG1168 10 RLGTNSLKWDAHPGNE--DVLPMWVADMDFPTPPEIIEALRERVDHGVFGYPYGSDELYAAIAHWFKQRHQWEIKPEWIV 87 (388)
T ss_pred hcCCCceeccccCCCC--CcceeeeecccCCCCHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcceEE
Confidence 4567788898765 22 555556677788899999999999999876655423344778899999988753 5699
Q ss_pred ecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHH
Q 012138 137 PMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEK 216 (470)
Q Consensus 137 ~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~ 216 (470)
|+++.--++..+++.+.+ +|+ .|++..|.|+-. ...+...+......+... ..+.+.+ |.++||+
T Consensus 88 ~~p~VVpgi~~~I~~~T~---------~gd-~Vvi~tPvY~PF-~~~i~~n~R~~i~~pL~~-~~~~y~i---D~~~LE~ 152 (388)
T COG1168 88 FVPGVVPGISLAIRALTK---------PGD-GVVIQTPVYPPF-YNAIKLNGRKVIENPLVE-DDGRYEI---DFDALEK 152 (388)
T ss_pred EcCcchHhHHHHHHHhCc---------CCC-eeEecCCCchHH-HHHHhhcCcEEEeccccc-cCCcEEe---cHHHHHH
Confidence 999999999999998865 566 677777777432 122222222211111111 1223555 9999999
Q ss_pred HHHhcCCCeEEEE-EccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccC-CccccccC-----CCCccee
Q 012138 217 IFKESGDQIAGFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG-RMLASDWE-----EVRPDMV 289 (470)
Q Consensus 217 ~l~~~~~~~~~vi-~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G-~~~~~~~~-----~~~pdi~ 289 (470)
++.+. ++++++ |+| |||+|.+. ++++|.+|.++|.+||+++|+||+|+.+...| +.+.+... +....++
T Consensus 153 ~~~~~--~vkl~iLCnP-HNP~Grvw-t~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~ 228 (388)
T COG1168 153 AFVDE--RVKLFILCNP-HNPTGRVW-TKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLT 228 (388)
T ss_pred HHhcC--CccEEEEeCC-CCCCCccc-cHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEe
Confidence 99873 556666 999 99999999 99999999999999999999999999987777 33322211 1111234
Q ss_pred ecccccc-CCCcceeEEE-ecHHHHhhcCc-CCccCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHH
Q 012138 290 ILGKALG-GGVIPVSAVL-ADKEVMLCIQP-GEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKI 364 (470)
Q Consensus 290 s~sK~l~-gG~~~ig~v~-~~~~~~~~~~~-~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l 364 (470)
+-||++. +|+ .++.++ .++++..++.. .......+.|.+++.|..++++.-+. +++.+.++.+.+++.+.+++.
T Consensus 229 saSKtFNlaGL-~~a~~Ii~n~~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~ 307 (388)
T COG1168 229 SASKTFNLAGL-KCAYIIISNRELRAKFLKRLKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKH 307 (388)
T ss_pred eccccccchhh-hheeEEecCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 5579998 788 888766 56665444432 22234445789999999999886554 668888888888888887764
Q ss_pred HhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHc-CceeccC------CCCEEEEecCCCCCHHHHHHHHHHH
Q 012138 365 QQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT------HDTIVRLTPPLSISSNELQEGSKAL 437 (470)
Q Consensus 365 ~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~------~~~~iR~~~~~~~t~e~i~~~~~~l 437 (470)
.| .+....++|.++.| ++....+.+..++.+.|+++ +|.+.+| +.+++|+. +..+++-+++++++|
T Consensus 308 ---~P-~v~v~~p~gTYL~W-LD~r~l~l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN--~acpr~~L~eal~ri 380 (388)
T COG1168 308 ---LP-GVKVTEPQGTYLAW-LDCRELGLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLN--FACPRAILEEALERL 380 (388)
T ss_pred ---CC-CcEEecCCCceeee-eeccccCCChHHHHHHHHHhhcEeccCCCccCcCCCceEEEe--cCCCHHHHHHHHHHH
Confidence 33 67888999999999 77766556677889988877 8888765 46899999 889999999999999
Q ss_pred HHHHhccc
Q 012138 438 HDVLELDL 445 (470)
Q Consensus 438 ~~~l~~~~ 445 (470)
..+++ .+
T Consensus 381 ~~al~-~~ 387 (388)
T COG1168 381 KRALK-KR 387 (388)
T ss_pred HHHHh-cc
Confidence 99987 54
No 104
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.97 E-value=9.6e-29 Score=229.12 Aligned_cols=323 Identities=19% Similarity=0.274 Sum_probs=253.8
Q ss_pred ccCCcccccCCCCCHHHHHHHHHHHHHccccCC-----CCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHH
Q 012138 80 FLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSR-----AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARK 154 (470)
Q Consensus 80 ~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~ 154 (470)
|+..|.+.+ .||+|.+|+.+.+++++.+.+ ...+..+.+|++.|+++.+.+..++++|..-||...+..+.+
T Consensus 177 CSNDYLgms---~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHqK~aALlFsSCfVANDstLftLak 253 (570)
T KOG1360|consen 177 CSNDYLGMS---RHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQKEAALLFSSCFVANDSTLFTLAK 253 (570)
T ss_pred ecCcccccc---CChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhcCcceeeeeeeeeccchHHHHHHH
Confidence 333354444 899999999999998765432 235667899999999999999999999999999998885543
Q ss_pred hchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCC-CeEEEEEccc
Q 012138 155 WGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGD-QIAGFLFEPI 233 (470)
Q Consensus 155 ~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~-~~~~vi~epi 233 (470)
- -.+-+|.+..+. |.++...+.-++.+. ..|+|||+++|++++++.+. .++.|-+|.+
T Consensus 254 ~--------lpgcei~SD~gN-HASMI~GIrns~v~K------------~IFrHND~~hL~~lL~~~~~svPKivAFEtV 312 (570)
T KOG1360|consen 254 K--------LPGCEIFSDEGN-HASMIQGIRNSRVPK------------HIFRHNDLDHLEQLLQSSPKSVPKIVAFETV 312 (570)
T ss_pred H--------CCCcEEeccccc-hHHHHHHhhhcCCcc------------eeeccCCHHHHHHHHHhCCCCCCceEEEeee
Confidence 1 134477777776 888877776655432 58899999999999988653 5677779999
Q ss_pred cCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-C-CcccCCccccccCCCC--ccee--ecccccc--CCCcceeEE
Q 012138 234 QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLASDWEEVR--PDMV--ILGKALG--GGVIPVSAV 305 (470)
Q Consensus 234 ~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g-~g~~G~~~~~~~~~~~--pdi~--s~sK~l~--gG~~~ig~v 305 (470)
++++|.+.| +++|.+++++||++-++||||+ | +|..|.+. -+..|+. .||+ +++|++| ||| |
T Consensus 313 hSM~Gavcp----leelcDvah~yGAiTFlDEVHAVGlYG~rGaGv-gerdGvm~kvDiIsGTLgKafGcVGGY-----I 382 (570)
T KOG1360|consen 313 HSMDGAVCP----LEELCDVAHKYGAITFLDEVHAVGLYGPRGAGV-GERDGVMHKVDIISGTLGKAFGCVGGY-----I 382 (570)
T ss_pred eccCCCcCC----HHHHHHHHHHhCceeeeehhhhhccccCCCCCc-cccCCcchhhhhcccchhhhcccccce-----e
Confidence 999999999 9999999999999999999999 6 44555443 3556663 4666 8999999 776 8
Q ss_pred EecHHHHhhcCcCCccCCCC--CCHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccce
Q 012138 306 LADKEVMLCIQPGEHGSTFG--GNPLASAVAIASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL 380 (470)
Q Consensus 306 ~~~~~~~~~~~~~~~~~t~~--~~~~~~aaa~a~l~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~ 380 (470)
.++..++|.++.+..+..|+ .+|.-++.|+++.+++..+ .+++.-+++..++++.|.+++ +..++....
T Consensus 383 Aat~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~G------iPVi~~pSH 456 (570)
T KOG1360|consen 383 AATRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELG------IPVIPNPSH 456 (570)
T ss_pred hhhhhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcC------CcccCCCcc
Confidence 89999999999877776664 7888899999999988753 366666777888888887753 445566667
Q ss_pred eEEEEeccCCCchhHHHHHHHHHHc-Cceec-------cCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccC
Q 012138 381 FNAVEFDKTALPVSAYDICLKMKER-GILAK-------PTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~-------~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
++.+.+.... .+..+++.|..+ ||++. +.+...+|+.|...+|++-++.+++.|.++++ ++.
T Consensus 457 IiPv~vgda~---l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~-~v~ 526 (570)
T KOG1360|consen 457 IIPVRVGDAA---LAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWN-EVG 526 (570)
T ss_pred eeeeeccCHH---HHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHH-HcC
Confidence 7777666543 677888888877 99875 33577899999999999999999999999998 654
No 105
>PRK07682 hypothetical protein; Validated
Probab=99.97 E-value=9.3e-29 Score=246.71 Aligned_cols=333 Identities=13% Similarity=0.116 Sum_probs=227.5
Q ss_pred EEeccCCcccccCCCCCHHHHHHHHHHHHHc-c-ccCCCCCCCcHHHHHHHHhhhhCC----C-eEEecCChhHHHHHHH
Q 012138 77 YLDFLSAYSAVNQGHCHPKIMKALQEQAEKL-T-LSSRAFYNDKFPVFAERLTSMFGY----D-MVLPMNTGAEGVETAL 149 (470)
Q Consensus 77 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~-~~~~~~~~~~~~~l~~~l~~~~~~----~-~v~~~~sGteA~~~al 149 (470)
+++|..+.... + .++.+.+++.+.++.. . +.+.....++++++++++.+.+|. + +|++|+|+++|+..++
T Consensus 22 ~i~l~~~~~~~--~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~ 98 (378)
T PRK07682 22 VISLGVGEPDF--V-TPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAM 98 (378)
T ss_pred eEEeCCCCCCC--C-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHH
Confidence 57787775432 2 5677888888877642 1 212233455677777777765442 3 7999999999999998
Q ss_pred HHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCC-CeeeecCCCHHHHHHHHHhcCCCeEEE
Q 012138 150 KLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLP-GHLKVDFGDITALEKIFKESGDQIAGF 228 (470)
Q Consensus 150 ~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~Le~~l~~~~~~~~~v 228 (470)
+.+.. +|+ .|++.+++|+.........+.. .... +... +...+ |+++|++++.+ +++++
T Consensus 99 ~~l~~---------~gd-~vl~~~p~y~~~~~~~~~~g~~-~~~~---~~~~~~~~~~---d~~~l~~~~~~---~~~~v 158 (378)
T PRK07682 99 RAIIN---------PGD-EVLIVEPSFVSYAPLVTLAGGV-PVPV---ATTLENEFKV---QPAQIEAAITA---KTKAI 158 (378)
T ss_pred HHhCC---------CCC-EEEEeCCCchhhHHHHHHcCCE-EEEe---ecCCccCCCC---CHHHHHhhcCc---ccEEE
Confidence 87754 455 8888999987554333222221 1100 1000 01122 78999988865 67777
Q ss_pred EEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcccc-ccCCCC---cceeecccccc-CCCccee
Q 012138 229 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DWEEVR---PDMVILGKALG-GGVIPVS 303 (470)
Q Consensus 229 i~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~-~~~~~~---pdi~s~sK~l~-gG~~~ig 303 (470)
++..++||||.++ +.+.+++|.++|++||+++|+||+|.+|.+.+....+ ...+.. ..+.+|||.++ +|+ |+|
T Consensus 159 ~~~~p~NPtG~~~-s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl-R~G 236 (378)
T PRK07682 159 LLCSPNNPTGAVL-NKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGW-RLG 236 (378)
T ss_pred EEECCCCCcCcCc-CHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhh-hhh
Confidence 6444499999999 8999999999999999999999999987665542211 111211 12459999998 898 999
Q ss_pred EEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecccee
Q 012138 304 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF 381 (470)
Q Consensus 304 ~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~ 381 (470)
|+++++++++.+........++.+.+++.++.++|+..+. +.++++++++++.+.+.|++++ +....+.|.+
T Consensus 237 ~~~~~~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~------~~~~~p~g~~ 310 (378)
T PRK07682 237 FIAAPVYFSEAMLKIHQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEIG------LTCHVPGGAF 310 (378)
T ss_pred hhhcCHHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHCC------CccCCCCeeE
Confidence 9999999999886544344566788888888777753211 3455666777777777777642 3334566666
Q ss_pred EEEE-eccCCCchhHHHHHHHHH-HcCceeccCC------CCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 382 NAVE-FDKTALPVSAYDICLKMK-ERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 382 ~~~~-~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
+.|. +.... .+..++++.|+ ++||.+.|+. .+++|++. ..+++++++++++|+++++ ++
T Consensus 311 ~~~~~~~~~~--~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~--~~~~~~l~~~l~~l~~~l~-~~ 377 (378)
T PRK07682 311 YAFPSISSTG--LSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSY--ATSLEQLQEAMKRMKRFVE-NK 377 (378)
T ss_pred EEEEeccCCC--CCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEe--CCCHHHHHHHHHHHHHHHh-hc
Confidence 6663 32211 25678898876 6799998762 58999995 4579999999999999988 54
No 106
>PLN02483 serine palmitoyltransferase
Probab=99.97 E-value=6.2e-28 Score=246.22 Aligned_cols=332 Identities=15% Similarity=0.156 Sum_probs=238.2
Q ss_pred CCCCeEEeccCCcccccCCC--CCHHHHHHHHHHHHHcccc---CC--CCCCCcHHHHHHHHhhhhCCCeEEecCChhHH
Q 012138 72 PEGNKYLDFLSAYSAVNQGH--CHPKIMKALQEQAEKLTLS---SR--AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEG 144 (470)
Q Consensus 72 ~~G~~~lD~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~~~---~~--~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA 144 (470)
..++++|||.++ +.||. +++...+++.+++++++.. ++ ....+.+.++++.+++++|.+..+++++|+.+
T Consensus 97 ~~~~~~~n~~s~---~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~~~ai~~~~G~~a 173 (489)
T PLN02483 97 TKTRRCLNLGSY---NYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGKPAAIVFGMGYAT 173 (489)
T ss_pred CCCceEEEeecC---CccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCCCcEEEECCHHHH
Confidence 457899999886 33444 4677888888888887643 22 12456789999999999998877777889999
Q ss_pred HHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcC--
Q 012138 145 VETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG-- 222 (470)
Q Consensus 145 ~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~-- 222 (470)
+..++..+.. +|+ .|++.+++|++ ........+. .+..++++|+++|++++++.-
T Consensus 174 n~~~i~al~~---------~Gd-~Vi~d~~~h~s-~~~~~~~~Ga------------~v~~~~~~d~~~le~~l~~~i~~ 230 (489)
T PLN02483 174 NSTIIPALIG---------KGG-LIISDSLNHNS-IVNGARGSGA------------TIRVFQHNTPSHLEEVLREQIAE 230 (489)
T ss_pred HHHHHHHhCC---------CCC-EEEEcchhhHH-HHHHHHHcCC------------eEEEEeCCCHHHHHHHHHhhhhc
Confidence 9887776644 465 77778877544 4433333331 245778889999988876420
Q ss_pred --CC------eEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-C-CcccCCccccccCCCCc---cee
Q 012138 223 --DQ------IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLASDWEEVRP---DMV 289 (470)
Q Consensus 223 --~~------~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g-~g~~G~~~~~~~~~~~p---di~ 289 (470)
++ ..+|++|++.+++|.+.+ +++|.++|++||++||+||+|+ | +|++|+.. .+++++.| |++
T Consensus 231 ~~p~t~~p~~k~livve~v~s~~G~~~~----l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~-~~~~~v~~~~~dI~ 305 (489)
T PLN02483 231 GQPRTHRPWKKIIVIVEGIYSMEGELCK----LPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGV-CELLGVDPADVDIM 305 (489)
T ss_pred cccccccCCceEEEEECCCCCCCCcccC----HHHHHHHHHHcCCEEEEECcCccCccCCCCCch-HHhcCCCcccCcEE
Confidence 11 236679999999999998 9999999999999999999998 3 55666553 34455433 555
Q ss_pred --eccccccCCCcceeEEEecHHHHhhcCcCCccCCCC--CCHHHHHHHHHHHHHHhh-------hhHHHHHHHHHHHHH
Q 012138 290 --ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG--GNPLASAVAIASLDVIRD-------EKLAERSAHLGEELR 358 (470)
Q Consensus 290 --s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~--~~~~~~aaa~a~l~~~~~-------~~~~~~~~~~~~~l~ 358 (470)
||||++++ ..|++++++++++.++....+.+++ .++..++++.++|+.+.. .+.+++++++.++++
T Consensus 306 ~~SfSKs~g~---~GG~i~~~~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~ 382 (489)
T PLN02483 306 MGTFTKSFGS---CGGYIAGSKELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFR 382 (489)
T ss_pred EEecchhccc---CceEEEcCHHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHH
Confidence 99999973 3367999999999987654444443 466777777788886642 235667888888888
Q ss_pred HHHHHHHhhCCCceEEEe-ccceeEEEEeccCCCchhHHHHHHHHHHcCceeccC-------CCCEEEEecCCCCCHHHH
Q 012138 359 QHLFKIQQQFPNYVKEVR-GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------HDTIVRLTPPLSISSNEL 430 (470)
Q Consensus 359 ~~L~~l~~~~p~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------~~~~iR~~~~~~~t~e~i 430 (470)
+.|++++ +.... ..+.+.++.+... .+..++++.|+++||.+.+. ..+.+||+++..+|+|+|
T Consensus 383 ~~L~~~G------~~v~~~~~sp~~~l~l~~~---~~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edI 453 (489)
T PLN02483 383 SELQKMG------FEVLGDNDSPVMPIMLYNP---AKIPAFSRECLKQNVAVVVVGFPATPLLLARARICISASHSREDL 453 (489)
T ss_pred HHHHHCC------CcccCCCCCCEEEEEECCH---HHHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHH
Confidence 8888752 11111 2233444433332 25668999999999998742 236899999999999999
Q ss_pred HHHHHHHHHHHhcccCC
Q 012138 431 QEGSKALHDVLELDLPK 447 (470)
Q Consensus 431 ~~~~~~l~~~l~~~~~~ 447 (470)
++++++|+++++ .+.-
T Consensus 454 d~~l~~L~~~~~-~~~~ 469 (489)
T PLN02483 454 IKALEVISEVGD-LVGI 469 (489)
T ss_pred HHHHHHHHHHHH-HhCc
Confidence 999999999988 6643
No 107
>PLN00175 aminotransferase family protein; Provisional
Probab=99.97 E-value=1.6e-28 Score=246.81 Aligned_cols=333 Identities=15% Similarity=0.172 Sum_probs=228.0
Q ss_pred eEEeccCCcccccCCCCCHHHHHHHHHHHHHcc--ccCCCCCCCcHHHHHHHHhhhhC----CC-eEEecCChhHHHHHH
Q 012138 76 KYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLT--LSSRAFYNDKFPVFAERLTSMFG----YD-MVLPMNTGAEGVETA 148 (470)
Q Consensus 76 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~----~~-~v~~~~sGteA~~~a 148 (470)
.++||..|.+..+ .++.+.+++.+.++... +.......++++.+++++.+..+ .+ +|++|+|+++|+..+
T Consensus 55 ~~i~l~~G~P~~~---~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~ 131 (413)
T PLN00175 55 GAINLGQGFPNFD---GPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAAT 131 (413)
T ss_pred CeEecCCCCCCCC---CCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHH
Confidence 5789988865432 57889999988887521 11112234556677777766544 33 699999999999998
Q ss_pred HHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEE
Q 012138 149 LKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGF 228 (470)
Q Consensus 149 l~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~v 228 (470)
+..+.. +|+ .|++.+|+|..........+..... .++.++...+ |+++|++.+.. ++++|
T Consensus 132 ~~~l~~---------~gd-~Vlv~~P~y~~~~~~~~~~g~~~~~----v~~~~~~~~~---~~~~l~~~~~~---~~k~i 191 (413)
T PLN00175 132 ILGLIN---------PGD-EVILFAPFYDSYEATLSMAGAKIKT----VTLRPPDFAV---PEDELKAAFTS---KTRAI 191 (413)
T ss_pred HHHhCC---------CCC-EEEEeCCCchhHHHHHHHcCCEEEE----EECCcccCCC---CHHHHHHhcCc---CceEE
Confidence 886654 565 7888889986554333222221111 1111111112 78999988865 67888
Q ss_pred EEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcccc-ccCCCC---cceeecccccc-CCCccee
Q 012138 229 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DWEEVR---PDMVILGKALG-GGVIPVS 303 (470)
Q Consensus 229 i~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~-~~~~~~---pdi~s~sK~l~-gG~~~ig 303 (470)
+++.++||+|.++ +.+.+++|.++|++||++||+||+|..+.+.+..... +..+.. .-+.+|||.++ +|+ |+|
T Consensus 192 ~i~~p~NPtG~~~-s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~-RiG 269 (413)
T PLN00175 192 LINTPHNPTGKMF-TREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGW-KIG 269 (413)
T ss_pred EecCCCCCCCcCC-CHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcch-hee
Confidence 8776799999999 8999999999999999999999999987554432111 111211 22349999998 899 999
Q ss_pred EEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecccee
Q 012138 304 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF 381 (470)
Q Consensus 304 ~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~ 381 (470)
|+++++++++.+.......+++.+.+.+.++.++|+..+. +.+++.++++++.+.+.|++. .+....+.|.+
T Consensus 270 ~~v~~~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~------g~~~~~p~g~~ 343 (413)
T PLN00175 270 WAIAPPHLTWGVRQAHSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEV------GFKVYPSSGTY 343 (413)
T ss_pred eeEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC------CCeecCCCeeE
Confidence 9999999998886554445677888888888877753211 345666777777777777663 23344566666
Q ss_pred EEE-EeccCCCchhHHHHHHHHHH-cCceeccCC---------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 382 NAV-EFDKTALPVSAYDICLKMKE-RGILAKPTH---------DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 382 ~~~-~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~---------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
+.| .+.... ..+..++++.|.+ +||.+.|+. .+++||++ ..+++++++++++|.++++
T Consensus 344 f~~~~~~~~~-~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~--~~~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 344 FVMVDHTPFG-FENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAF--CKDEETLRAAVERMKTKLK 412 (413)
T ss_pred EEEEeccccC-CCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEE--cCCHHHHHHHHHHHHHHHh
Confidence 555 322111 0146789998875 599988752 46899995 4689999999999999876
No 108
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.97 E-value=1.7e-28 Score=219.07 Aligned_cols=344 Identities=18% Similarity=0.240 Sum_probs=255.7
Q ss_pred CCCCceEEEeecCCEEEeCCC--CeEEeccCC-cccccCCCCCHHHHHHHHHHHHHccccCCC-----CCCCcHHHHHHH
Q 012138 54 YHPVPIVFSQAKGSSIWDPEG--NKYLDFLSA-YSAVNQGHCHPKIMKALQEQAEKLTLSSRA-----FYNDKFPVFAER 125 (470)
Q Consensus 54 ~~~~p~~~~~~~g~~~~d~~G--~~~lD~~~~-~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~-----~~~~~~~~l~~~ 125 (470)
|... -+++..+|..+. ++| +++|+|+.+ |.+.+ +||+|.++-.++++.++.+... .+.+.+..|+.+
T Consensus 46 wk~e-rVi~s~q~p~i~-v~G~~k~ilnFcaNnYLGLs---shPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~k 120 (417)
T KOG1359|consen 46 WKRE-RVITSRQGPTIQ-VKGSDKKILNFCANNYLGLS---SHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESK 120 (417)
T ss_pred ceee-eEEeecccceEE-Eeccccceeeeccccccccc---CChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHH
Confidence 4433 556777887775 555 589999876 54444 8999999999999998765432 267889999999
Q ss_pred HhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeee
Q 012138 126 LTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLK 205 (470)
Q Consensus 126 l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (470)
++++.+.++.++.+++..||..++.+++. | .+.|++..-+ |.+....+.+...
T Consensus 121 iAqfh~rED~ilypscfdANag~feail~---------p-edAvfSDeLN-hASIIdGirLckr---------------- 173 (417)
T KOG1359|consen 121 IAQFHGREDTILYPSCFDANAGAFEAILT---------P-EDAVFSDELN-HASIIDGIRLCKR---------------- 173 (417)
T ss_pred HHHHhCCCceEEeccccccchHHHHHhcC---------h-hhhhhccccc-cchhhhhhHHHhh----------------
Confidence 99999999999999999999999988765 3 3366666666 8887777665431
Q ss_pred ecCCCHHHHHHHHHhc-CCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-C-CcccCCccccccC
Q 012138 206 VDFGDITALEKIFKES-GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLASDWE 282 (470)
Q Consensus 206 ~~~~d~~~Le~~l~~~-~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g-~g~~G~~~~~~~~ 282 (470)
..|-|+.++|..+.+. .-+.++|+.+.+.++.|.+.| +++|.++++|||+++++||+|+ | ||.+|++. -+.+
T Consensus 174 y~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaP----l~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt-~E~~ 248 (417)
T KOG1359|consen 174 YRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAP----LEEISQLAKKYGALLFIDECHATGFFGETGRGT-AEEF 248 (417)
T ss_pred hccchhHHHHHHHHHhhhheEEEEEecceeccCCCccc----HHHHHHHHHhcCcEEEEeecccceeecCCCCCh-HHHh
Confidence 1222777787766542 237789999999999999999 9999999999999999999999 5 67888775 3556
Q ss_pred CC--Cccee--eccccccCCCcceeEEEecHHHHhhcCcCCccCCCC--CCHHHHHHHHHHHHH-HhhhhHHHHHHHHHH
Q 012138 283 EV--RPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG--GNPLASAVAIASLDV-IRDEKLAERSAHLGE 355 (470)
Q Consensus 283 ~~--~pdi~--s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~--~~~~~~aaa~a~l~~-~~~~~~~~~~~~~~~ 355 (470)
|+ ++|++ +++|++||. .-|++.+++.+++.++......-|+ .+|.-...+.++++. |....+....+.+.+
T Consensus 249 ~vm~~vdiinsTLgKAlGga--~GGyttgp~~li~llrqr~RpylFSnslppavV~~a~ka~dllm~s~~~i~~~~a~~q 326 (417)
T KOG1359|consen 249 GVMGDVDIINSTLGKALGGA--SGGYTTGPKPLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQ 326 (417)
T ss_pred CCCCcceehhhhhhhhhcCC--CCCCccCChhHHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHH
Confidence 65 35665 899999842 3445899999999887665555554 344444455556665 445667778888888
Q ss_pred HHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceec-------cCCCCEEEEecCCCCCHH
Q 012138 356 ELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK-------PTHDTIVRLTPPLSISSN 428 (470)
Q Consensus 356 ~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~-------~~~~~~iR~~~~~~~t~e 428 (470)
++++.++.- .+......-.+..+.+.+. ..+..++++|+++|+++. |.+...+|+.++..||+|
T Consensus 327 rfr~~me~a------GftIsg~~hPI~pv~lGda---~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~e 397 (417)
T KOG1359|consen 327 RFREFMEAA------GFTISGASHPICPVMLGDA---RLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAHTEE 397 (417)
T ss_pred HHHHHHHhc------CceecCCCCCccceecccH---HHHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEehhcCHH
Confidence 888887663 2332222234455545444 378889999999999874 445778999999999999
Q ss_pred HHHHHHHHHHHHHhcccC
Q 012138 429 ELQEGSKALHDVLELDLP 446 (470)
Q Consensus 429 ~i~~~~~~l~~~l~~~~~ 446 (470)
||+++++++.++.+ -+.
T Consensus 398 did~~i~Af~~vgr-~~~ 414 (417)
T KOG1359|consen 398 DIDRLIEAFSEVGR-FLN 414 (417)
T ss_pred HHHHHHHHHHHHHH-hhc
Confidence 99999999999987 443
No 109
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.97 E-value=4.8e-28 Score=243.10 Aligned_cols=340 Identities=14% Similarity=0.150 Sum_probs=223.7
Q ss_pred CeEEeccCCcccccCCCCCHHHHHHHHHHHHHcc---ccCCCCCCCcHHHHHHHHhhhhCC-----CeEEecCChhHHHH
Q 012138 75 NKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLT---LSSRAFYNDKFPVFAERLTSMFGY-----DMVLPMNTGAEGVE 146 (470)
Q Consensus 75 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~-----~~v~~~~sGteA~~ 146 (470)
+..+||..+... ++ ..+|.+.+++.+.+.... +.......++++.+++++++.+|. ++|++|+|+++++.
T Consensus 39 ~~~i~l~~g~~~-~~-~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~ 116 (405)
T PRK06207 39 GRPVDFSHGDVD-AH-EPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALF 116 (405)
T ss_pred CCceecCCcCCC-CC-CCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHH
Confidence 455677766433 22 356788888888876532 211223445678888888877652 67999999999999
Q ss_pred HHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCC-CeeeecCCCHHHHHHHHHhcCCCe
Q 012138 147 TALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLP-GHLKVDFGDITALEKIFKESGDQI 225 (470)
Q Consensus 147 ~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~Le~~l~~~~~~~ 225 (470)
.+++.+.. +|+ .|++..|+|.+........... ....+.....+ +...+ |+++|++++++ ++
T Consensus 117 ~~~~~l~~---------~Gd-~Vlv~~P~y~~~~~~~~~~g~~-v~~v~~~~~~~~~~~~~---d~~~l~~~~~~---~~ 179 (405)
T PRK06207 117 LAVAATVA---------RGD-KVAIVQPDYFANRKLVEFFEGE-MVPVQLDYLSADKRAGL---DLDQLEEAFKA---GV 179 (405)
T ss_pred HHHHHhcC---------CCC-EEEEeCCCchhHHHHHHHcCCE-EEEEeccccCcccCCCc---CHHHHHHhhhh---cC
Confidence 99987754 455 7888999997654333322221 11000000000 01122 78999998876 56
Q ss_pred EEEE-EccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcc-ccccCCCCc----ceeecccccc-CC
Q 012138 226 AGFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWEEVRP----DMVILGKALG-GG 298 (470)
Q Consensus 226 ~~vi-~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~-~~~~~~~~p----di~s~sK~l~-gG 298 (470)
++|+ ++| +||||.++ +.+.+++|.++|++||++||+||+|..|.+.|..+ ....+...+ -+.||||.++ +|
T Consensus 180 k~v~l~~P-~NPTG~~~-s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpG 257 (405)
T PRK06207 180 RVFLFSNP-NNPAGVVY-SAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSG 257 (405)
T ss_pred eEEEECCC-CCCCCcCC-CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcc
Confidence 7665 556 99999999 89999999999999999999999999876555321 111111112 2348999999 99
Q ss_pred CcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEe
Q 012138 299 VIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR--DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR 376 (470)
Q Consensus 299 ~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~--~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~ 376 (470)
+ |+||+++++++++.+.........+.+.+.+.++.++|+.-. -++..+..+++++.+.+.|++ ++ .+....
T Consensus 258 l-RiG~ii~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~-~~~~~~ 331 (405)
T PRK06207 258 Y-RLGVAFGSPAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRG----VE-GVFVRA 331 (405)
T ss_pred c-ceEEEEcCHHHHHHHHHHHhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhc----CC-CceecC
Confidence 8 999999999999888654433444556677777766664210 022233334444444444433 22 244444
Q ss_pred cc-ceeEEEEeccCCCchhHHHHHHHHH-HcCceeccCC------CCEEEEecCCCCCHHHHHHHHHHHHHHHhcccC
Q 012138 377 GR-GLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 377 ~~-g~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
+. |.|+++.+.... .+..++++.|+ ++||.+.|+. .+++|++.. .+++++++++++|.++++ +++
T Consensus 332 p~gg~fl~~~l~~~~--~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~--~~~~~l~~al~rl~~~l~-~~~ 404 (405)
T PRK06207 332 PQAGSYLFPRLPRLA--VSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFS--QDHAAAVAAAERIAQLIE-RYR 404 (405)
T ss_pred CCeeEEEEEeCcccC--CCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHH-Hhh
Confidence 54 556666554211 25678999997 5699998863 579999954 589999999999999998 653
No 110
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.96 E-value=7e-28 Score=240.51 Aligned_cols=335 Identities=16% Similarity=0.204 Sum_probs=226.1
Q ss_pred CCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCC-CCcHHHHHHHHhhhhCC--CeEEecCChhHHHHHHHH
Q 012138 74 GNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFY-NDKFPVFAERLTSMFGY--DMVLPMNTGAEGVETALK 150 (470)
Q Consensus 74 G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~--~~v~~~~sGteA~~~al~ 150 (470)
+..+|++..+... + +.+|.+.+++.+.+...... .+. ..-..++.+.++++++. +++++++|+++|+..+++
T Consensus 27 ~~~~i~l~~~~~~--~-~~~~~~~~a~~~~~~~~~~~--~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~ 101 (380)
T PRK06225 27 DKEMIWMGQNTNH--L-GPHEEVREAMIRCIEEGEYC--KYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVMR 101 (380)
T ss_pred cCCeEEccCCCCC--C-CCCHHHHHHHHHHHhcCCCC--CCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHH
Confidence 4567888766432 3 37899999999988653221 121 22357788888888764 579999999999999998
Q ss_pred HHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCC--CCeeeecCCCHHHHHHHHHhcCCCeEEE
Q 012138 151 LARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLL--PGHLKVDFGDITALEKIFKESGDQIAGF 228 (470)
Q Consensus 151 ~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~Le~~l~~~~~~~~~v 228 (470)
.+.. +|+ .|++.+++|+....... ..+..... .+.. .+...+ |++++++.+.+ ++++|
T Consensus 102 ~~~~---------~gd-~vl~~~p~y~~~~~~~~-~~g~~~~~---v~~~~~~~~~~~---d~~~l~~~~~~---~~~~v 161 (380)
T PRK06225 102 AFLS---------PGD-NAVTPDPGYLIIDNFAS-RFGAEVIE---VPIYSEECNYKL---TPELVKENMDE---NTRLI 161 (380)
T ss_pred HhcC---------CCC-EEEEcCCCCcchHHHHH-HhCceEEe---eccccccCCccC---CHHHHHhhcCC---CceEE
Confidence 7653 454 68888888864432221 11111110 0100 001122 78899988865 67777
Q ss_pred E-EccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcccccc-CCCCcceeecccccc-CCCcceeEE
Q 012138 229 L-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDW-EEVRPDMVILGKALG-GGVIPVSAV 305 (470)
Q Consensus 229 i-~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~-~~~~pdi~s~sK~l~-gG~~~ig~v 305 (470)
+ ++| +||+|.++ +.+++++|.++|++||+++|+||+|.+|.. +....... .....++.+|||.++ +|+ |+|++
T Consensus 162 ~l~~p-~NptG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~-~~~~~~~~~~~~~i~~~s~SK~~g~~G~-RiG~i 237 (380)
T PRK06225 162 YLIDP-LNPLGSSY-TEEEIKEFAEIARDNDAFLLHDCTYRDFAR-EHTLAAEYAPEHTVTSYSFSKIFGMAGL-RIGAV 237 (380)
T ss_pred EEeCC-CCCCCcCC-CHHHHHHHHHHHHHCCcEEEEehhHHHHhc-cCCchhhcCCCCEEEEeechhhcCCccc-eeEEE
Confidence 6 555 99999999 899999999999999999999999987642 21111111 112234669999998 898 99999
Q ss_pred EecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCc-eEEEeccceeE
Q 012138 306 LADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNY-VKEVRGRGLFN 382 (470)
Q Consensus 306 ~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~-~~~~~~~g~~~ 382 (470)
++++++++.+.... ..+++.+.++++++.++++...+ +.+.+..+++.+.+.+.|+++ ++. +...++.|.++
T Consensus 238 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~g~~~ 312 (380)
T PRK06225 238 VATPDLIEVVKSIV-INDLGTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEI----EGVFLPVYPSHGNMM 312 (380)
T ss_pred ecCHHHHHHHHHHH-hcccCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhC----cCCccccCCCCCeEE
Confidence 99999998876532 34567788888888777754211 223333344444555555543 111 22234567788
Q ss_pred EEEeccCCCchhHHHHHHHHHHcCceeccC-------CCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccCC
Q 012138 383 AVEFDKTALPVSAYDICLKMKERGILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 447 (470)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~ 447 (470)
++.+.... .+..++++.|.++||.+.|+ +.+++|++ +..++|++++++++|+++++ +++.
T Consensus 313 ~~~~~~~~--~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s--~~~~~e~l~~~~~~l~~~~~-~~~~ 379 (380)
T PRK06225 313 VIDISEAG--IDPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVS--FSIPREQVEVFCEEFPDVVE-TLRT 379 (380)
T ss_pred EEEccccc--CCHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEE--eCCCHHHHHHHHHHHHHHHH-Hhhc
Confidence 77764322 36788999999999999875 24689999 45689999999999999998 7764
No 111
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.96 E-value=8.8e-28 Score=240.23 Aligned_cols=332 Identities=15% Similarity=0.144 Sum_probs=225.0
Q ss_pred eEEeccCCcccccCCCCCHHHHHHHHHHHHHccc--cCCCCCCCcHHHHHHHHhhhhC----CCeEEecCChhHHHHHHH
Q 012138 76 KYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTL--SSRAFYNDKFPVFAERLTSMFG----YDMVLPMNTGAEGVETAL 149 (470)
Q Consensus 76 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~----~~~v~~~~sGteA~~~al 149 (470)
.+++|..|.+..+ .++.+.+++.+.+..... .......++++.+++++.+.++ .+++++|+|+++|+..++
T Consensus 25 ~~i~l~~g~~~~~---~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~ 101 (382)
T PRK06108 25 GVLPLWFGESDLP---TPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAA 101 (382)
T ss_pred CeEEecCCCCCCC---CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHH
Confidence 4678888754422 578999999888765321 1122344567778888776655 468999999999999999
Q ss_pred HHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCC--CeeeecCCCHHHHHHHHHhcCCCeEE
Q 012138 150 KLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLP--GHLKVDFGDITALEKIFKESGDQIAG 227 (470)
Q Consensus 150 ~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~Le~~l~~~~~~~~~ 227 (470)
+.+.. +|+ .|++..++|..........+.. .. ..+... +...+ |+++|++.++. ++++
T Consensus 102 ~~l~~---------~gd-~vl~~~p~y~~~~~~~~~~g~~-~~---~v~~~~~~~~~~~---d~~~l~~~~~~---~~~~ 161 (382)
T PRK06108 102 QALVG---------PGD-EVVAVTPLWPNLVAAPKILGAR-VV---CVPLDFGGGGWTL---DLDRLLAAITP---RTRA 161 (382)
T ss_pred HHhcC---------CCC-EEEEeCCCccchHHHHHHCCCE-EE---EeeCCCCCCCccC---CHHHHHHhcCc---cceE
Confidence 87754 455 6888888886543322222211 11 011110 01112 78999888864 6777
Q ss_pred EEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCccc-CCc-cc-cccCCCCcc---eeecccccc-CCCc
Q 012138 228 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS-GRM-LA-SDWEEVRPD---MVILGKALG-GGVI 300 (470)
Q Consensus 228 vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~-G~~-~~-~~~~~~~pd---i~s~sK~l~-gG~~ 300 (470)
++++.++||+|.++ +.+.+++|.++|++||++||+||+|.++.+. +.. .. .+.....+. +.+|||.++ +|+
T Consensus 162 i~l~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~- 239 (382)
T PRK06108 162 LFINSPNNPTGWTA-SRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGW- 239 (382)
T ss_pred EEEECCCCCCCccc-CHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCccc-
Confidence 77655699999999 8999999999999999999999999987543 211 11 111111112 348999997 798
Q ss_pred ceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecc
Q 012138 301 PVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGR 378 (470)
Q Consensus 301 ~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~ 378 (470)
|+||+++++++++.+.......+++.+++.+.++.++|+...+ ++++++++++.+.+.+.|+++ + .+....+.
T Consensus 240 RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~-~~~~~~p~ 314 (382)
T PRK06108 240 RLGWLVAPPALGQVLEKLIEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRAL----P-GVEVAKPD 314 (382)
T ss_pred ceeeeeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhC----C-CCcccCCC
Confidence 9999999999988876543334556788888888877764221 345566666666676666553 1 24444556
Q ss_pred ceeE-EEEeccCCCchhHHHHHHHHH-HcCceeccCC------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 379 GLFN-AVEFDKTALPVSAYDICLKMK-ERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 379 g~~~-~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
|.++ ++.++... +..++++.|. ++||.+.|+. .+++||++.. +++++++++++|.++++
T Consensus 315 ~g~~~~~~l~~~~---~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 315 GAMYAFFRIPGVT---DSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR--DPARLDEAVERLRRFLA 381 (382)
T ss_pred eeEEEEEeCCCCC---CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 5555 44444322 5678998886 5699998752 5799999665 89999999999999875
No 112
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=8.7e-28 Score=238.77 Aligned_cols=323 Identities=15% Similarity=0.115 Sum_probs=217.4
Q ss_pred eEEeccCCcccccCCCCCHHHHHHHHHHHHHc----cccCCCCCCCcHHHHHHHHhhhhC----CCeEEecCChhHHHHH
Q 012138 76 KYLDFLSAYSAVNQGHCHPKIMKALQEQAEKL----TLSSRAFYNDKFPVFAERLTSMFG----YDMVLPMNTGAEGVET 147 (470)
Q Consensus 76 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~~----~~~v~~~~sGteA~~~ 147 (470)
..+|+..+... ...+|.+.+++.+.+... ..++.....++++.+++++.+.++ .++|++|+|+++++..
T Consensus 27 ~~i~l~~~~~~---~~~~~~~~~al~~~l~~~~~~~~~Y~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~ 103 (368)
T PRK03317 27 VPVRLNTNENP---YPPSPALVADIAEAVAEAAAGLNRYPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQ 103 (368)
T ss_pred ceeEecCCCCC---CCCCHHHHHHHHHHHhhhhhhhccCCCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHH
Confidence 36888877433 237899999999887532 111111122345555666555433 4679999999999999
Q ss_pred HHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEE
Q 012138 148 ALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAG 227 (470)
Q Consensus 148 al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~ 227 (470)
+++++.. +|+ .|++..|+|++........... .... +. .+...+ |+++++++++++ ++++
T Consensus 104 ~~~~~~~---------~gd-~v~v~~P~y~~~~~~~~~~g~~-~~~~---~~-~~~~~~---d~~~l~~~~~~~--~~~~ 163 (368)
T PRK03317 104 LLQAFGG---------PGR-TALGFVPSYSMHPIIARGTHTE-WVEG---PR-AADFTL---DVDAAVAAIAEH--RPDV 163 (368)
T ss_pred HHHHhcC---------CCC-EEEEeCCChHHHHHHHHhcCCe-eEEc---cc-CCCCCC---CHHHHHHHHhcc--CCCE
Confidence 9997765 455 7888999997654433221111 1100 00 001122 789999998753 4566
Q ss_pred EEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCccee---ecccccc-CCCccee
Q 012138 228 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV---ILGKALG-GGVIPVS 303 (470)
Q Consensus 228 vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~---s~sK~l~-gG~~~ig 303 (470)
|+++.++||+|.+++ .+++.++|+.++++||+||+|++|++.|........+..|+++ ||||+++ +|+ |+|
T Consensus 164 i~l~~p~NPtG~~~~----~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~Gl-RiG 238 (368)
T PRK03317 164 VFLTSPNNPTGTALP----LDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGG-RLG 238 (368)
T ss_pred EEEeCCCCCCCCCCC----HHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchh-hhh
Confidence 664445999999995 5566666666689999999999987666443333333345665 9999998 898 999
Q ss_pred EEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeE
Q 012138 304 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN 382 (470)
Q Consensus 304 ~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~ 382 (470)
|+++++++++.+.... .+|+.++++++++.++|+..+. .+..+++++..+.+.+.|++. .+....+.|.++
T Consensus 239 ~~~~~~~~~~~l~~~~--~~~~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~------g~~~~~~~~~~~ 310 (368)
T PRK03317 239 YLAAAPAVVDALRLVR--LPYHLSAVTQAAARAALRHADELLASVAALRAERDRVVAWLREL------GLRVAPSDANFV 310 (368)
T ss_pred hhhCCHHHHHHHHhcC--CCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHC------CCEeCCCCCcEE
Confidence 9999999999887433 4678889999998888865322 122333444555555555442 234445677777
Q ss_pred EEEeccCCCchhHHHHHHHHHHcCceeccCC-CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 383 AVEFDKTALPVSAYDICLKMKERGILAKPTH-DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
.|. ... +..++++.|+++||.+.+.+ ++++||++ .+.+++++++++|+++++
T Consensus 311 ~~~-~~~----~~~~~~~~l~~~Gv~v~~~~~~~~iRi~~---~~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 311 LFG-RFA----DRHAVWQGLLDRGVLIRDVGIPGWLRVTI---GTPEENDAFLAALAEVLA 363 (368)
T ss_pred EEe-ccC----CHHHHHHHHHHCCEEEEeCCCCCeEEEec---CCHHHHHHHHHHHHHHHH
Confidence 662 221 46789999999999998754 58999993 478899999999999886
No 113
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.96 E-value=2.2e-27 Score=235.75 Aligned_cols=322 Identities=17% Similarity=0.183 Sum_probs=223.5
Q ss_pred CeEEeccCCcccccCCC-CCHHHHHHHHHHHHHcc-------ccCCC-C----CCCcHHHHHHHHhhhhCCCeEEecCCh
Q 012138 75 NKYLDFLSAYSAVNQGH-CHPKIMKALQEQAEKLT-------LSSRA-F----YNDKFPVFAERLTSMFGYDMVLPMNTG 141 (470)
Q Consensus 75 ~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~-------~~~~~-~----~~~~~~~l~~~l~~~~~~~~v~~~~sG 141 (470)
.+++||.++ ..||+ .+|.+.+++.++++.+. ....+ - ..+.+.++++.++++++.+.++++++|
T Consensus 4 ~~~~~~~s~---~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~~l~~~sG 80 (370)
T PRK05937 4 SLSIDFVTN---DFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPEAFIVPSG 80 (370)
T ss_pred CceEEeECC---CccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCeEEEECCh
Confidence 357788776 33444 68999999999887762 21111 1 346789999999999998888889999
Q ss_pred hHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhc
Q 012138 142 AEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKES 221 (470)
Q Consensus 142 teA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~ 221 (470)
+.|+...+..+. ++..+|+.+..+|+++..++..... . ...++++|+++|+++++..
T Consensus 81 ~~a~~~~~~~~~-----------~~~d~ii~d~~~H~sv~~~~~~~~~--~----------~~~~~~~d~~~l~~~l~~~ 137 (370)
T PRK05937 81 YMANLGLCAHLS-----------SVTDYVLWDEQVHISVVYSLSVISG--W----------HQSFRHNDLDHLESLLESC 137 (370)
T ss_pred HHHHHHHHHHhC-----------CCCCEEEEEhhhhHHHHHHHHHcCC--c----------eEEecCCCHHHHHHHHHhh
Confidence 988865443321 1225666777889998887655321 1 2456788999999999753
Q ss_pred C---CCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-C-CcccCCcccc--ccCCCCcceeecccc
Q 012138 222 G---DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLAS--DWEEVRPDMVILGKA 294 (470)
Q Consensus 222 ~---~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g-~g~~G~~~~~--~~~~~~pdi~s~sK~ 294 (470)
. +++.+|++++++|++|.+.| +++|.++|+++|+++++||+|+ | ++.+|..+.. ...+..+|+.||||.
T Consensus 138 ~~~~~~~~~v~v~~v~s~~G~i~p----l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~ 213 (370)
T PRK05937 138 RQRSFGRIFIFVCSVYSFKGTLAP----LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKA 213 (370)
T ss_pred hccCCCcEEEEEecCCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhh
Confidence 1 24567778999999999998 9999999999999999999999 5 6667654321 111223577899999
Q ss_pred ccC-CCcceeEEEecHHHHhhcCc--CCccCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCC
Q 012138 295 LGG-GVIPVSAVLADKEVMLCIQP--GEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFP 369 (470)
Q Consensus 295 l~g-G~~~ig~v~~~~~~~~~~~~--~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p 369 (470)
+++ |. .+++.+++.+.+.. .....+.+.++++++++.++++.+.+ +..+++++++.+++.+.|...
T Consensus 214 ~g~~G~----~vl~~~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~~----- 284 (370)
T PRK05937 214 LGSMGA----ALLSSSEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSSA----- 284 (370)
T ss_pred hhcCce----EEEcCHHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCC-----
Confidence 974 32 35565665554331 11223334678888888888988765 334556666666666554321
Q ss_pred CceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccC---CCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccC
Q 012138 370 NYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT---HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 370 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
+.+....+.++. .....+.+.|.++||.+... ..+.+|++++..+|+|||+++++.|.++++ ++.
T Consensus 285 -------~~~~~~~i~~~~----~~~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~t~edid~l~~~L~~~~~-~~~ 352 (370)
T PRK05937 285 -------APGCVQPIFLPG----ISEQELYSKLVETGIRVGVVCFPTGPFLRVNLHAFNTEDEVDILVSVLATYLE-KYQ 352 (370)
T ss_pred -------CCCCEEEEEeCC----hhHHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH-HhC
Confidence 011122233432 24578889999999988632 256899999999999999999999999998 764
Q ss_pred C
Q 012138 447 K 447 (470)
Q Consensus 447 ~ 447 (470)
+
T Consensus 353 ~ 353 (370)
T PRK05937 353 K 353 (370)
T ss_pred C
Confidence 4
No 114
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.96 E-value=1.5e-27 Score=239.45 Aligned_cols=330 Identities=13% Similarity=0.125 Sum_probs=222.4
Q ss_pred CCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccC--CCCCCCcHHHHHHHHhhhhC----C-CeEEecCChhHHHH
Q 012138 74 GNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSS--RAFYNDKFPVFAERLTSMFG----Y-DMVLPMNTGAEGVE 146 (470)
Q Consensus 74 G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~~----~-~~v~~~~sGteA~~ 146 (470)
|..++||..+... ++ .++.+.+++.+.+.....+. .....++++.+++++.+..| . ++|++|+|+++|+.
T Consensus 31 ~~~~i~l~~g~p~--~~-~~~~~~~~~~~~~~~~~~~~y~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~ 107 (399)
T PRK07681 31 GHKMIDLSIGNPD--MP-PADFVREEMVHTANQKESYGYTLSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLV 107 (399)
T ss_pred CCCeEEeCCCCCC--CC-CCHHHHHHHHHHHhccccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHH
Confidence 5567899888543 22 57888888888775432111 12234456677777765533 3 67999999999999
Q ss_pred HHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCC-eeeecCCCHHHHHHHHHhcCCCe
Q 012138 147 TALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-HLKVDFGDITALEKIFKESGDQI 225 (470)
Q Consensus 147 ~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~Le~~l~~~~~~~ 225 (470)
.++.++.. +|+ .|++..|+|.+........+..... .+...+ .+.+ |++++++.+.+ ++
T Consensus 108 ~~~~~~~~---------~Gd-~Vlv~~P~y~~~~~~~~~~G~~~~~----v~~~~~~~~~~---d~~~l~~~~~~---~~ 167 (399)
T PRK07681 108 HLPMVYAN---------PGD-IILVPDPGYTAYETGIQMAGATSYY----MPLKKENDFLP---DLELIPEEIAD---KA 167 (399)
T ss_pred HHHHHhCC---------CCC-EEEECCCCccchHHHHHhcCCEEEE----EecCCCCCCcC---CHHHHHHhccc---cc
Confidence 98887654 455 7888999997665544333322111 111111 1112 78888887754 67
Q ss_pred EEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcc-cc-ccC---CCCcceeecccccc-CCC
Q 012138 226 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-DWE---EVRPDMVILGKALG-GGV 299 (470)
Q Consensus 226 ~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~-~~-~~~---~~~pdi~s~sK~l~-gG~ 299 (470)
++|+++.++||||.++ +++.+++|.++|++||++||+||+|.+|...+... .. +.. +....+.||||.++ +|+
T Consensus 168 k~v~l~~P~NPTG~~~-s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl 246 (399)
T PRK07681 168 KMMILNFPGNPVPAMA-HEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGS 246 (399)
T ss_pred eEEEEeCCCCCcCcCC-CHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccc
Confidence 8888663499999999 99999999999999999999999999875444221 11 111 11223459999998 998
Q ss_pred cceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Q 012138 300 IPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG 377 (470)
Q Consensus 300 ~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~ 377 (470)
|+||+++++++++.+........++.+.+.+.++.+.|+.-.+ +..++.++++.+.+.+.|++. .+....+
T Consensus 247 -RiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~------g~~~~~p 319 (399)
T PRK07681 247 -RIGYMIGNEEIVRALTQFKSNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTF------GWNVDKP 319 (399)
T ss_pred -eeEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC------CCcccCC
Confidence 9999999999998886544445667778888888777753211 233445555566666666553 1332234
Q ss_pred c-ceeEEEEeccCCCchhHHHHHHHHHH-cCceeccCC------CCEEEEecCCCCCHHHHHHHHHHHHH
Q 012138 378 R-GLFNAVEFDKTALPVSAYDICLKMKE-RGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHD 439 (470)
Q Consensus 378 ~-g~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~~ 439 (470)
. |.++++.+... .++.++++.|.+ +||.+.|+. .+++|++. ..+++++++++++|++
T Consensus 320 ~~g~f~~~~l~~~---~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~--~~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 320 AGSMFVWAEIPKG---WTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIAL--VQDEEVLQQAVENIRN 384 (399)
T ss_pred CeeeEEEEECCCC---CCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEe--cCCHHHHHHHHHHHHH
Confidence 4 55555555432 257789999887 799998762 46999995 4688999999999988
No 115
>PRK07324 transaminase; Validated
Probab=99.96 E-value=7.7e-28 Score=239.11 Aligned_cols=338 Identities=16% Similarity=0.205 Sum_probs=224.3
Q ss_pred EEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhh---CCCeEEecCChhHHH
Q 012138 69 IWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMF---GYDMVLPMNTGAEGV 145 (470)
Q Consensus 69 ~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~v~~~~sGteA~ 145 (470)
-++..|..++++..+ .++...++.+ +++.+++......+.. ..-..+|.+.+++++ ..++|++|+|+++|+
T Consensus 20 ~~~~~~~~~~~~~~~---e~~~~~~~~~-~~~~~~~~~~~~~Y~~--~~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~al 93 (373)
T PRK07324 20 TYDIAESCIDSLTLE---ELLALAGKNP-EAFYQELGQKKLTYGW--IEGSPEFKEAVASLYQNVKPENILQTNGATGAN 93 (373)
T ss_pred ccccccCCCCCCcHH---HHHhccCcch-HHHHHHHhcCCccCCC--CCCCHHHHHHHHHHhcCCChhhEEEcCChHHHH
Confidence 356666667777665 3333356667 8887777654332211 112356666666654 357899999999999
Q ss_pred HHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCC-eeeecCCCHHHHHHHHHhcCCC
Q 012138 146 ETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-HLKVDFGDITALEKIFKESGDQ 224 (470)
Q Consensus 146 ~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~Le~~l~~~~~~ 224 (470)
..++..+.. +|+ .|++..|+|..........+.... +.+...+ ... .|++++++++.+ +
T Consensus 94 ~~~~~~l~~---------~gd-~Vl~~~P~y~~~~~~~~~~g~~v~----~v~~~~~~~~~---~d~~~l~~~~~~---~ 153 (373)
T PRK07324 94 FLVLYALVE---------PGD-HVISVYPTYQQLYDIPESLGAEVD----YWQLKEENGWL---PDLDELRRLVRP---N 153 (373)
T ss_pred HHHHHHhCC---------CCC-EEEEcCCCchhHHHHHHHcCCEEE----EEecccccCCC---CCHHHHHHhCCC---C
Confidence 999987754 465 677788888654332222221111 0111110 011 178889887765 7
Q ss_pred eEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcccc-ccCCCCcceeecccccc-CCCcce
Q 012138 225 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DWEEVRPDMVILGKALG-GGVIPV 302 (470)
Q Consensus 225 ~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~-~~~~~~pdi~s~sK~l~-gG~~~i 302 (470)
+++|+++.++||||.++ +++.+++|.++|++||++||+||+|.++...+..... +..+....+.+|||.++ +|+ |+
T Consensus 154 ~kli~i~~p~NPtG~~~-~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~-Ri 231 (373)
T PRK07324 154 TKLICINNANNPTGALM-DRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGI-RV 231 (373)
T ss_pred CcEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCccc-ee
Confidence 78888767799999999 8999999999999999999999999987655432211 11111123459999998 898 99
Q ss_pred eEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccce
Q 012138 303 SAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL 380 (470)
Q Consensus 303 g~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~ 380 (470)
||+++++++++.+.......+++.+.+++.++..+|+..+. +..++.++++.+.+.+.|. ..| .+..+.+.|.
T Consensus 232 G~i~~~~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~----~~~-~~~~~~p~gg 306 (373)
T PRK07324 232 GWIAANEEVIDILRKYRDYTMICAGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVA----KEP-RVSYVKPKAV 306 (373)
T ss_pred EEEecCHHHHHHHHHHhCcEEecCChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHh----cCC-CceEECCCce
Confidence 99999999998887665556677788888888777753211 2223333334444444333 232 4555666665
Q ss_pred e-EEEEeccCCCchhHHHHHHHHH-HcCceeccCC----CCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 381 F-NAVEFDKTALPVSAYDICLKMK-ERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 381 ~-~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~----~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
+ .++.++.. .+..+++++|+ +.||.+.|+. ++++||+ +..+++.+++++++|.++++ +.
T Consensus 307 ~~~~i~~~~~---~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis--~~~~~~~l~~~l~rl~~~l~-~~ 371 (373)
T PRK07324 307 STSFVKLDVD---MPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIG--YCCDTETLKKGLKKLSEFLR-EF 371 (373)
T ss_pred EEEEEEeCCC---CCHHHHHHHHHHhcCEEEECccccCCCCeEEEE--ecCCHHHHHHHHHHHHHHHH-hc
Confidence 4 44444433 26778999876 5699999874 5899999 55689999999999999997 53
No 116
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.96 E-value=8.4e-27 Score=230.28 Aligned_cols=325 Identities=22% Similarity=0.264 Sum_probs=227.7
Q ss_pred CeEEeccCCcccccCCCC-CHHHHHHHHHHHHHccccCCC-----CCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHH
Q 012138 75 NKYLDFLSAYSAVNQGHC-HPKIMKALQEQAEKLTLSSRA-----FYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETA 148 (470)
Q Consensus 75 ~~~lD~~~~~~~~~lG~~-~p~v~~a~~~~~~~~~~~~~~-----~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~a 148 (470)
++||+|+++ ..||++ ||+|.+++.+.++++...... ...+...++++.++++++.+.++++++|++++..+
T Consensus 1 ~~~~~~~~~---~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~iv~~sg~~a~~~~ 77 (349)
T cd06454 1 KKVLNFCSN---DYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKEAALVFSSGYAANDGV 77 (349)
T ss_pred CCceecccC---CccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCCCEEEeccHHHHHHHH
Confidence 468888887 668886 999999999999876432111 24677889999999999988888889999999988
Q ss_pred HHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcC--CCeE
Q 012138 149 LKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG--DQIA 226 (470)
Q Consensus 149 l~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~--~~~~ 226 (470)
++.+.. +|+ .|++.++. |..........+. ....++..|++++++++++.. .+++
T Consensus 78 ~~~~~~---------~gd-~Vl~~~~~-~~~~~~~~~~~g~------------~~~~~~~~~~~~le~~i~~~~~~~~~~ 134 (349)
T cd06454 78 LSTLAG---------KGD-LIISDSLN-HASIIDGIRLSGA------------KKRIFKHNDMEDLEKLLREARRPYGKK 134 (349)
T ss_pred HHHhcC---------CCC-EEEEehhh-hHHHHHHHHHcCC------------ceEEecCCCHHHHHHHHHHhhccCCCe
Confidence 876643 455 67776665 4433322222221 123344558899999997632 3678
Q ss_pred EEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-C-CcccCCccc-cccCCCCccee--eccccccCCCcc
Q 012138 227 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLA-SDWEEVRPDMV--ILGKALGGGVIP 301 (470)
Q Consensus 227 ~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g-~g~~G~~~~-~~~~~~~pdi~--s~sK~l~gG~~~ 301 (470)
+|++++++|++|...| +++|.++|++||+++|+||+|+ | ++..+.... ........|++ +++|.+++ +
T Consensus 135 ~v~~~~~~~~tG~~~~----~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~---~ 207 (349)
T cd06454 135 LIVTEGVYSMDGDIAP----LPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGA---V 207 (349)
T ss_pred EEEEeccccCCCCccC----HHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcc---c
Confidence 8888888999999987 9999999999999999999997 3 222222110 11111123544 78998874 3
Q ss_pred eeEEEecHHHHhhcCcCCc--cCCCCCCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecc
Q 012138 302 VSAVLADKEVMLCIQPGEH--GSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGR 378 (470)
Q Consensus 302 ig~v~~~~~~~~~~~~~~~--~~t~~~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~ 378 (470)
.|++++++++++.+..... ..+.+.++..++++.++++.+.+ +...++++++.+++.+.|.+++. ....+.
T Consensus 208 gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~g~------~~~~~~ 281 (349)
T cd06454 208 GGYIAGSKELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKELGF------PVGGSP 281 (349)
T ss_pred CCEEECCHHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCC------cccCCC
Confidence 4678888888877654322 12235678888888899988765 56778888889999888877521 122222
Q ss_pred ceeEEEEeccCCCchhHHHHHHHHHHcCceeccC-------CCCEEEEecCCCCCHHHHHHHHHHHHHH
Q 012138 379 GLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDV 440 (470)
Q Consensus 379 g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------~~~~iR~~~~~~~t~e~i~~~~~~l~~~ 440 (470)
+.++.+....+. .+..++.+.|.++||.+.++ ..+++|++++...+++++++++++|+++
T Consensus 282 ~~~~~~~~~~~~--~~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 282 SHIIPPLIGDDP--AKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred CCcEEEEeCCCh--HHHHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 333333222211 36788999999999998652 2478999999889999999999999864
No 117
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.96 E-value=2.1e-27 Score=237.67 Aligned_cols=335 Identities=13% Similarity=0.131 Sum_probs=214.8
Q ss_pred CCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHcc---ccCCCCCCCcHHHHHHHHhhhhC----CC-eEEecCChhHH
Q 012138 73 EGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLT---LSSRAFYNDKFPVFAERLTSMFG----YD-MVLPMNTGAEG 144 (470)
Q Consensus 73 ~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~----~~-~v~~~~sGteA 144 (470)
+|+.++||..|... ++ .++.+.+++.+.+.... +.......++++.+++++.+..| .+ +|++|+|+++|
T Consensus 28 ~~~~~i~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~a 104 (388)
T PRK07366 28 AGKELIDLSLGSSD--LP-APAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEG 104 (388)
T ss_pred cCCCeEEeCCCCCC--CC-CCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHH
Confidence 35667888877543 22 57889999988775321 11112234556667777765443 45 69999999999
Q ss_pred HHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCC-eeeecCCCHHHHHHHHHhcCC
Q 012138 145 VETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-HLKVDFGDITALEKIFKESGD 223 (470)
Q Consensus 145 ~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~Le~~l~~~~~ 223 (470)
+..+++++.. +|+ .|++..|+|.+....+...+... .. .+..++ .+.. |++++++.+..
T Consensus 105 l~~~~~~l~~---------~gd-~Vlv~~P~y~~~~~~~~~~g~~~-~~---v~~~~~~~~~~---d~~~l~~~~~~--- 164 (388)
T PRK07366 105 TAHLPLAVLN---------PGD-FALLLDPGYPSHAGGVYLAGGQI-YP---MPLRAENDFLP---VFADIPTEVLA--- 164 (388)
T ss_pred HHHHHHHhCC---------CCC-EEEEcCCCCcchHHHHHhcCCEE-EE---EECCCccCCCC---CHHHHHHhhcc---
Confidence 9999887654 455 78889999977654443333221 11 111111 1111 67777776654
Q ss_pred CeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCc--cccccCC----CCcceeecccccc-
Q 012138 224 QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM--LASDWEE----VRPDMVILGKALG- 296 (470)
Q Consensus 224 ~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~--~~~~~~~----~~pdi~s~sK~l~- 296 (470)
++++|++.+++||||.++ +.+.+++|.++|++||++||+||+|..|.+.+.. ....... ...-+.||||.++
T Consensus 165 ~~k~i~l~~p~NPTG~~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~ 243 (388)
T PRK07366 165 QARLMVLSYPHNPTTAIA-PLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNM 243 (388)
T ss_pred cceEEEEeCCCCCCCccC-CHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCC
Confidence 577777666699999999 9999999999999999999999999987554431 1111111 1112349999997
Q ss_pred CCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEE
Q 012138 297 GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKE 374 (470)
Q Consensus 297 gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~ 374 (470)
+|+ |+||+++++++++.+........++.....+.++.+++..-++ +.+++.++++++.+.+.|++++ +..
T Consensus 244 ~Gl-RiG~~v~~~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~~------~~~ 316 (388)
T PRK07366 244 GGF-RIGFAIGNAQLIQALRQVKAVVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQIG------WPV 316 (388)
T ss_pred cch-hheehcCCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC------Ccc
Confidence 998 9999999999998876543333333333333444444431111 3345556666666666665531 222
Q ss_pred Eec-cceeEEEEeccCCCchhHHHHHHHHH-HcCceeccCC------CCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 012138 375 VRG-RGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVL 441 (470)
Q Consensus 375 ~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~~~l 441 (470)
..+ .|.|+++.++... ..+..++++.|. ++||.+.|+. .+++||+. ..+++++++++++|.+++
T Consensus 317 ~~p~~g~f~~~~~~~~~-~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~--~~~~~~l~~~l~rl~~~l 388 (388)
T PRK07366 317 PLPEATMYVWAKLPEPW-QGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFAL--VHDPDILEEAVERIAAFL 388 (388)
T ss_pred cCCCeeEEEEEECCccc-CCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEe--cCCHHHHHHHHHHHHHhC
Confidence 333 4555555554311 113567887774 5699998862 47999994 467999999999998764
No 118
>PRK12414 putative aminotransferase; Provisional
Probab=99.96 E-value=3.5e-27 Score=235.56 Aligned_cols=330 Identities=15% Similarity=0.153 Sum_probs=220.9
Q ss_pred eEEeccCCcccccCCCCCHHHHHHHHHHHHHcc--ccCCCCCCCcHHHHHHHHhhhhCC-----CeEEecCChhHHHHHH
Q 012138 76 KYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLT--LSSRAFYNDKFPVFAERLTSMFGY-----DMVLPMNTGAEGVETA 148 (470)
Q Consensus 76 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~-----~~v~~~~sGteA~~~a 148 (470)
.+|||..|... ++ .++.+.+++.+.++... +.+.....++++++++++++++|. +++++|+|+++|+..+
T Consensus 30 ~~i~l~~g~p~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~ 106 (384)
T PRK12414 30 DALNLSQGAPN--FA-PDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAA 106 (384)
T ss_pred CeEEcCCCCCC--CC-CCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHH
Confidence 46788877543 22 57889999888776421 112223456678888888887764 4699999999999999
Q ss_pred HHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEE
Q 012138 149 LKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGF 228 (470)
Q Consensus 149 l~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~v 228 (470)
++.+.. +|+ .|++..++|.............. .. .+...+...+ |++.|+++++. ++++|
T Consensus 107 ~~~l~~---------~gd-~Vlv~~p~y~~~~~~~~~~g~~~-~~---v~~~~~~~~~---d~~~l~~~l~~---~~~~v 166 (384)
T PRK12414 107 ISALVH---------PGD-EVIYFEPSFDSYAPIVRLQGATP-VA---IKLSPEDFRV---NWDEVAAAITP---RTRMI 166 (384)
T ss_pred HHHhcC---------CCC-EEEEeCCCccchHHHHHHcCCEE-EE---EecCcccccc---CHHHHHhhcCc---ccEEE
Confidence 987754 465 78888999865433322222111 00 1111111122 78999988864 67878
Q ss_pred EEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcc-cc-ccCCCC---cceeecccccc-CCCcce
Q 012138 229 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-DWEEVR---PDMVILGKALG-GGVIPV 302 (470)
Q Consensus 229 i~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~-~~-~~~~~~---pdi~s~sK~l~-gG~~~i 302 (470)
++..++||||.++ +++.+++|.++|++||+++|+||+|..|.+.+... .. ...+.. .-+.||||.++ +|+ |+
T Consensus 167 ~i~~p~NPTG~~~-s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGl-Ri 244 (384)
T PRK12414 167 IVNTPHNPSATVF-SAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGW-RV 244 (384)
T ss_pred EEcCCCCCCCcCC-CHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccc-eE
Confidence 8655699999999 89999999999999999999999999765544221 11 111211 12348999997 998 99
Q ss_pred eEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecccee
Q 012138 303 SAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF 381 (470)
Q Consensus 303 g~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~-~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~ 381 (470)
||+++++++++.+.......+++.+.+++.++...|+.-. ...+.+.++++++.+.+.|++. .+...++.|.|
T Consensus 245 G~~v~~~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~------g~~~~~~~gg~ 318 (384)
T PRK12414 245 GYCLAPAELMDEIRKVHQFMVFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGS------RFELLPSEGSF 318 (384)
T ss_pred EEEecCHHHHHHHHHHHhheecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhC------CCeecCCCcce
Confidence 9999999998887654444567778888888776664211 1234556666777777776663 23344566766
Q ss_pred EEE-EeccCCCchhHHHHH-HHHHHcCceeccCC--------CCEEEEecCCCCCHHHHHHHHHHHHH
Q 012138 382 NAV-EFDKTALPVSAYDIC-LKMKERGILAKPTH--------DTIVRLTPPLSISSNELQEGSKALHD 439 (470)
Q Consensus 382 ~~~-~~~~~~~~~~~~~~~-~~l~~~Gv~~~~~~--------~~~iR~~~~~~~t~e~i~~~~~~l~~ 439 (470)
+.| .+.... .....+++ +.|.++||.+.|+. .+++|++. ..+++++++++++|.+
T Consensus 319 ~~~~~~~~~~-~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~--~~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 319 FMLARFRHFS-DESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSF--SKDDATLVEGARRLCS 383 (384)
T ss_pred EEEEcccccC-CCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEe--cCCHHHHHHHHHHHhh
Confidence 666 443210 01344555 55667799998852 46899995 4579999999999865
No 119
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.96 E-value=9.7e-27 Score=235.59 Aligned_cols=337 Identities=20% Similarity=0.224 Sum_probs=238.7
Q ss_pred CCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHcccc------CCCCCCCcHHHHHHHHhhhhC----CCeEEecCChh
Q 012138 73 EGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLS------SRAFYNDKFPVFAERLTSMFG----YDMVLPMNTGA 142 (470)
Q Consensus 73 ~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~------~~~~~~~~~~~l~~~l~~~~~----~~~v~~~~sGt 142 (470)
+....+||..+.....+. +...+.+++.+.++..... ......++++.+++++....| .++|++|+|.+
T Consensus 87 ~~~~~i~f~~g~p~~~~f-p~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q 165 (459)
T COG1167 87 DDPSVIDFAGGLPDPSLF-PLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQ 165 (459)
T ss_pred CCCceecCCCCCCCcccC-CHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHH
Confidence 346778888886433222 3445666666665433221 112234556667777663333 46899999999
Q ss_pred HHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCC----CHHHHHHHH
Q 012138 143 EGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG----DITALEKIF 218 (470)
Q Consensus 143 eA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----d~~~Le~~l 218 (470)
+|++.+++++.. ||+ .|++.+|+|++........... ...+|.+ |+++||+.+
T Consensus 166 ~al~l~~~~l~~---------pGd-~v~vE~PtY~~~~~~~~~~g~~-------------~~~vp~d~~G~~~e~le~~~ 222 (459)
T COG1167 166 QALDLLLRLLLD---------PGD-TVLVEDPTYPGALQALEALGAR-------------VIPVPVDEDGIDPEALEEAL 222 (459)
T ss_pred HHHHHHHHHhCC---------CCC-EEEEcCCCcHHHHHHHHHcCCc-------------EEecCCCCCCCCHHHHHHHH
Confidence 999999998865 565 9999999998765544333221 2233332 799999999
Q ss_pred HhcCCCeEEEEEcc-ccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCc----cccccCCCCcceeeccc
Q 012138 219 KESGDQIAGFLFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM----LASDWEEVRPDMVILGK 293 (470)
Q Consensus 219 ~~~~~~~~~vi~ep-i~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~----~~~~~~~~~pdi~s~sK 293 (470)
+++ +++++++.| .|||||.++ +.+..++|.++|++||++||.||.|+.|.+.+.. .+.+..+...-+.||||
T Consensus 223 ~~~--~~k~~y~~P~~qNPtG~tm-s~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK 299 (459)
T COG1167 223 AQW--KPKAVYVTPTFQNPTGVTM-SLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSK 299 (459)
T ss_pred hhc--CCcEEEECCCCCCCCCCcc-CHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehh
Confidence 886 789999999 899999999 9999999999999999999999999988666432 23333333445669999
Q ss_pred cccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHH--Hhh--hhHHHHHHHHHHHHHHHHHHHHhhCC
Q 012138 294 ALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDV--IRD--EKLAERSAHLGEELRQHLFKIQQQFP 369 (470)
Q Consensus 294 ~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~--~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p 369 (470)
.+++|+ |+||+++++++++.+....+..+.+.+.+.+.+....+.. +.+ ..+++.++++.+.+.+.|.+. .|
T Consensus 300 ~l~Pgl-RlG~vv~p~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~---~~ 375 (459)
T COG1167 300 TLAPGL-RLGYVVAPPELIEKLLRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEY---LP 375 (459)
T ss_pred hccccc-ceeeeeCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHh---CC
Confidence 999999 9999999999999998777777888888887777655541 111 234444444444444444443 22
Q ss_pred CceEEEecc-ceeEEEEeccCCCchhHHHHHHHHHHcCceecc-CC--------CCEEEEecCCCCCHHHHHHHHHHHHH
Q 012138 370 NYVKEVRGR-GLFNAVEFDKTALPVSAYDICLKMKERGILAKP-TH--------DTIVRLTPPLSISSNELQEGSKALHD 439 (470)
Q Consensus 370 ~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~-~~--------~~~iR~~~~~~~t~e~i~~~~~~l~~ 439 (470)
+.+....+. |.|+++.++... +..++.+.+.++||.+.| +. .+.+||+++. .+++++++++.+|.+
T Consensus 376 ~~~~~~~p~gG~flwl~l~~~~---~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~-~~~e~i~~gi~~l~~ 451 (459)
T COG1167 376 ELATWTRPEGGLFLWLELPEGI---DARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSS-PSEEEIEEGIKRLAA 451 (459)
T ss_pred CCeeeecCCceEEEEEEcCCCC---CHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCC-CCHHHHHHHHHHHHH
Confidence 234444444 666777666543 788999999999999887 31 4589999764 568999999999999
Q ss_pred HHhccc
Q 012138 440 VLELDL 445 (470)
Q Consensus 440 ~l~~~~ 445 (470)
++. +.
T Consensus 452 ~~~-~~ 456 (459)
T COG1167 452 LLR-EA 456 (459)
T ss_pred HHH-HH
Confidence 998 54
No 120
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.96 E-value=7e-27 Score=233.48 Aligned_cols=331 Identities=14% Similarity=0.192 Sum_probs=219.8
Q ss_pred eEEeccCCcccccCCCCCHHHHHHHHHHHHHc-cccC-CCCCCCcHHHHHHHHhhhh----CCCeEEecCChhHHHHHHH
Q 012138 76 KYLDFLSAYSAVNQGHCHPKIMKALQEQAEKL-TLSS-RAFYNDKFPVFAERLTSMF----GYDMVLPMNTGAEGVETAL 149 (470)
Q Consensus 76 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~-~~~~~~~~~~l~~~l~~~~----~~~~v~~~~sGteA~~~al 149 (470)
.++||..+.+. +. .++++.+++.+.+... ..++ ..+..++++.+++++.+.+ ..+++++|+|+++|+..++
T Consensus 30 ~~i~l~~g~p~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~ 106 (384)
T PRK06348 30 DIIDLSLGDPD--LI-TDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLAL 106 (384)
T ss_pred CcEEcCCCCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHH
Confidence 36788877433 22 5677777665544321 1111 1122345666777765543 3578999999999999999
Q ss_pred HHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCC-CCeeeecCCCHHHHHHHHHhcCCCeEEE
Q 012138 150 KLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLL-PGHLKVDFGDITALEKIFKESGDQIAGF 228 (470)
Q Consensus 150 ~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~Le~~l~~~~~~~~~v 228 (470)
.++.. +|+ .|++..|+|.+............ .. .+.. .+...+ |+++|++++++ ++++|
T Consensus 107 ~~~~~---------~gd-~vlv~~p~y~~~~~~~~~~g~~~-~~---~~~~~~~~~~~---d~~~l~~~~~~---~~~~v 166 (384)
T PRK06348 107 QSILD---------PGD-EVIIHEPYFTPYKDQIEMVGGKP-II---LETYEEDGFQI---NVKKLEALITS---KTKAI 166 (384)
T ss_pred HHhcC---------CCC-EEEEeCCCCcchHHHHHHcCCEE-EE---ecCCcCcCCcC---CHHHHHHhhCc---CccEE
Confidence 87754 455 78889999876554443332211 10 0110 011122 78999998865 66777
Q ss_pred EEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccc-cCCCCc---ceeecccccc-CCCccee
Q 012138 229 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASD-WEEVRP---DMVILGKALG-GGVIPVS 303 (470)
Q Consensus 229 i~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~-~~~~~p---di~s~sK~l~-gG~~~ig 303 (470)
++..++||||.++ +.+.+++|.++|++||++||+||+|.+|...+...... ..+..+ -+.||||.++ +|+ |+|
T Consensus 167 ~l~~p~NPtG~~~-s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~Gl-RiG 244 (384)
T PRK06348 167 ILNSPNNPTGAVF-SKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGW-RIG 244 (384)
T ss_pred EEeCCCCCCCcCC-CHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccc-cce
Confidence 7555599999999 99999999999999999999999999875443321111 111111 2349999999 898 999
Q ss_pred EEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecccee
Q 012138 304 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF 381 (470)
Q Consensus 304 ~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~ 381 (470)
|+++++++++.+........++.+++++.++..+++..++ +.+++.++++.+++.+.|+.+ + .+....+.|.|
T Consensus 245 ~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~----~-~~~~~~p~gg~ 319 (384)
T PRK06348 245 YVIAPDYIIETAKIINEGICFSAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESI----P-NLSLHPPKGSI 319 (384)
T ss_pred eeecCHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcC----C-CceeccCCeeE
Confidence 9999999988876555556677888888888877763321 234555556666666666542 2 23444566665
Q ss_pred EE-EEeccCCCchhHHHHHHHHHH-cCceeccCC------CCEEEEecCCCCCHHHHHHHHHHHHHH
Q 012138 382 NA-VEFDKTALPVSAYDICLKMKE-RGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDV 440 (470)
Q Consensus 382 ~~-~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~~~ 440 (470)
+. +.+.... .+..++++.|.+ .||.+.|+. .+++|++. ..+++++++++++|.++
T Consensus 320 ~~~~~~~~~~--~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~--~~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 320 YAFINIKKTG--LSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLAC--TVGIEVLEEAFNRIEKM 382 (384)
T ss_pred EEEEecccCC--CCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEe--cCCHHHHHHHHHHHHhh
Confidence 54 4443221 257789988875 599998763 57999995 46899999999998764
No 121
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.96 E-value=1e-26 Score=232.71 Aligned_cols=340 Identities=14% Similarity=0.148 Sum_probs=223.3
Q ss_pred CeEEeccCCcccccCCCCCHHHHHHHHHHHHHcc-cc-CCCCCCCcHHHHHHHHhhhhC-----CCeEEecCChhHHHHH
Q 012138 75 NKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLT-LS-SRAFYNDKFPVFAERLTSMFG-----YDMVLPMNTGAEGVET 147 (470)
Q Consensus 75 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~-~~~~~~~~~~~l~~~l~~~~~-----~~~v~~~~sGteA~~~ 147 (470)
..+|||..+... ++ .++.+.+++.+.+.... .+ +.....++++.+++++...++ .++|++|+|+++|+..
T Consensus 30 ~~~i~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~ 106 (391)
T PRK07309 30 PGILKLTLGEPD--FT-TPDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSA 106 (391)
T ss_pred CCeEEcCCCCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence 457899888654 33 46788888888775421 11 111223445556666554444 2579999999999999
Q ss_pred HHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEE
Q 012138 148 ALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAG 227 (470)
Q Consensus 148 al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~ 227 (470)
+++.+.. +|+ .|++..++|.+........... .. +.+...+...+ |+++|++++++..+++++
T Consensus 107 ~~~~~~~---------~gd-~vl~~~p~y~~~~~~~~~~g~~-~~---~~~~~~~~~~~---d~~~l~~~~~~~~~~~~~ 169 (391)
T PRK07309 107 SLTAILE---------PGD-KVLLPAPAYPGYEPIVNLVGAE-IV---EIDTTENDFVL---TPEMLEKAILEQGDKLKA 169 (391)
T ss_pred HHHHhcC---------CCC-EEEEeCCCCcchHHHHHHcCCE-EE---EEecCCcCCcC---CHHHHHHHhhccCCCeEE
Confidence 9887643 455 7888889987754332222211 11 11111111112 789999998764446888
Q ss_pred EEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCc-cccccC--CCCcceeecccccc-CCCccee
Q 012138 228 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDWE--EVRPDMVILGKALG-GGVIPVS 303 (470)
Q Consensus 228 vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~-~~~~~~--~~~pdi~s~sK~l~-gG~~~ig 303 (470)
|+++.++||+|.++ +.+.+++|.++|++||+++|+||+|..|...+.. ...... +...-+.+|||.++ +|+ |+|
T Consensus 170 i~l~~P~NPtG~~~-s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl-RvG 247 (391)
T PRK07309 170 VILNYPANPTGVTY-SREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGW-RIG 247 (391)
T ss_pred EEEECCCCCCCcCc-CHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccc-eeE
Confidence 88664499999999 8999999999999999999999999987554422 111111 11112349999998 898 999
Q ss_pred EEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecccee
Q 012138 304 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR--DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF 381 (470)
Q Consensus 304 ~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~--~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~ 381 (470)
|+++++++++.+.........+.+.+++.++...|+... ...++++++++++++.+.|++. .+....+.|.+
T Consensus 248 ~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~p~gg~ 321 (391)
T PRK07309 248 LIFAPAEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDL------GFKIIKPDGAF 321 (391)
T ss_pred EEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHC------CCeecCCCeeE
Confidence 999999999888643333334567777777777665321 1234556666666676666553 23444555665
Q ss_pred EEE-EeccCCCchhHHHHHHHH-HHcCceeccCC------CCEEEEecCCCCCHHHHHHHHHHHHHHHhcccC
Q 012138 382 NAV-EFDKTALPVSAYDICLKM-KERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 382 ~~~-~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
+.| .++... ..+..++++++ .++||.+.|+. ++++|++.+ .+.+++++++++|.++++ +++
T Consensus 322 ~~~~~l~~~~-~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~~i~~l~~~~~-~~~ 390 (391)
T PRK07309 322 YIFAKIPAGY-NQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYA--ASMETIKEAMKRLKEYME-EHA 390 (391)
T ss_pred EEEEECCCCC-CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHH-hhc
Confidence 554 443211 12466788765 56799998763 579999954 578999999999999998 653
No 122
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.96 E-value=6.3e-27 Score=234.80 Aligned_cols=341 Identities=15% Similarity=0.133 Sum_probs=224.5
Q ss_pred CCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccc--cCCCCCCCcHHHHHHHHhhhhC-----CC-eEEecCChhHH
Q 012138 73 EGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTL--SSRAFYNDKFPVFAERLTSMFG-----YD-MVLPMNTGAEG 144 (470)
Q Consensus 73 ~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~-----~~-~v~~~~sGteA 144 (470)
.|+.++|+..|... ++ .+|.+.+++.+.+..... ++......+++.+++++.+.+| .+ +|++|+|++++
T Consensus 42 ~~~~~i~L~~g~p~--~~-~~~~~~~~l~~~~~~~~~~~Y~~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~a 118 (410)
T PRK06290 42 PDMELIDMGVGEPD--EM-ADESVVEVLCEEAKKPENRGYADNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPA 118 (410)
T ss_pred CCCCeEEcCCCCCC--CC-CCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHH
Confidence 46667899888543 23 577888888876643211 1112334556677777765444 23 69999999999
Q ss_pred HHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCC-eeeecCCCHHHHHHHHHhcCC
Q 012138 145 VETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-HLKVDFGDITALEKIFKESGD 223 (470)
Q Consensus 145 ~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~Le~~l~~~~~ 223 (470)
+..++.++.. +|+ .|++..|+|.+....+...+.. ... .+...+ .... |++++++.+.+
T Consensus 119 l~~~~~~~~~---------~gd-~Vlv~~P~y~~~~~~~~~~g~~-v~~---v~~~~~~~~~~---d~~~l~~~~~~--- 178 (410)
T PRK06290 119 LAMLPSCFIN---------PGD-VTLMTVPGYPVTGTHTKYYGGE-VYN---LPLLEENNFLP---DLDSIPKDIKE--- 178 (410)
T ss_pred HHHHHHHhCC---------CCC-EEEEeCCCCccHHHHHHHcCCE-EEE---EecCCCcCCcC---CHHHHHHhhcc---
Confidence 9999887754 455 8888999997654433322221 110 111111 1111 78888888765
Q ss_pred CeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcccc-cc---CCCCcceeecccccc-CC
Q 012138 224 QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DW---EEVRPDMVILGKALG-GG 298 (470)
Q Consensus 224 ~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~-~~---~~~~pdi~s~sK~l~-gG 298 (470)
++++|+++.++||||.++ +.+.+++|.++|++||++||+||+|..+...+....+ .. .+...-+.+|||.++ +|
T Consensus 179 ~~k~i~l~nP~NPTG~v~-s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~G 257 (410)
T PRK06290 179 KAKLLYLNYPNNPTGAVA-TKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTG 257 (410)
T ss_pred cceEEEEECCCCCCCcCC-CHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCch
Confidence 678888664499999999 9999999999999999999999999976544422111 11 112123459999996 89
Q ss_pred CcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Q 012138 299 VIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG 377 (470)
Q Consensus 299 ~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~-~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~ 377 (470)
+ |+||+++++++++.+.........+.+.+++.++..+|+.-+ .+.++++++++.+.+.+.|+++ .+...++
T Consensus 258 l-RiG~ii~~~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~------g~~~~~p 330 (410)
T PRK06290 258 W-RLAFVVGNELIVKAFATVKDNNDSGQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEV------GFKAEMP 330 (410)
T ss_pred h-heEeEEeCHHHHHHHHHHHhccccCCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhC------CCeecCC
Confidence 8 999999999999888654433444455667777766665311 1335556666666676766653 1334456
Q ss_pred cceeEEE-EeccCCC----chhHHHHHHHHHHcC-ceeccCC--CCEEEEecC-CCCCHHHHHHHHHHHHHHHhccc
Q 012138 378 RGLFNAV-EFDKTAL----PVSAYDICLKMKERG-ILAKPTH--DTIVRLTPP-LSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 378 ~g~~~~~-~~~~~~~----~~~~~~~~~~l~~~G-v~~~~~~--~~~iR~~~~-~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
.|.|+.| .++.... ..+..++++.|.++| +.+.|+. ++++||+.. ...++|+.++++++|.+.|. ++
T Consensus 331 ~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~-~~ 406 (410)
T PRK06290 331 GGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTFEAKDEEEEDRILEEIKRRLS-DV 406 (410)
T ss_pred CeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCccccCeEEEEEEcccccccchhHHHHHHHHHHh-hc
Confidence 6666665 4432110 025778999999885 5555653 468999953 23588999999999999998 65
No 123
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.96 E-value=9.7e-27 Score=229.61 Aligned_cols=328 Identities=16% Similarity=0.132 Sum_probs=215.9
Q ss_pred EEeccCCcccccCCCCCHHHHHHHHHHHHHccccCC-CCCCCcHHHHHHHHhhhhC----CC-eEEecCChhHHHHHHHH
Q 012138 77 YLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMFG----YD-MVLPMNTGAEGVETALK 150 (470)
Q Consensus 77 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~----~~-~v~~~~sGteA~~~al~ 150 (470)
++||.++.+. -..+|++.+++.+.......++. ....++++.+++++.+.+| .+ +|++|+|+++|+..++.
T Consensus 2 ~~~~~~g~p~---~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~ 78 (350)
T TIGR03537 2 LFDFGTGDPK---EPTPPFIRKALIDAVPEVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPL 78 (350)
T ss_pred eEeccCCCCC---CCCCHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHH
Confidence 5788888543 22578899998887654322221 1223556667777665544 44 89999999999999887
Q ss_pred HHHHhchhcccCCCCC--cEEEEEccCccccccchhcccCCcccccCCCCCCC-CeeeecCCCHHHHHHHHHhcCCCeEE
Q 012138 151 LARKWGYVKKKFSIDE--AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLP-GHLKVDFGDITALEKIFKESGDQIAG 227 (470)
Q Consensus 151 ~~~~~~~~~~~~~~g~--~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~Le~~l~~~~~~~~~ 227 (470)
.+.. +|+ +.|++..|+|.+........+..... .+..+ +...+ |++++++++.+ ++++
T Consensus 79 ~~~~---------~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~----v~~~~~~~~~~---d~~~l~~~~~~---~~~~ 139 (350)
T TIGR03537 79 VFID---------PEEDRRRVIFGTPGYPVYERGALFAGGEPTA----VKLKKEDGFLL---RLEKVEKSILE---ETKI 139 (350)
T ss_pred HHcC---------CCCCCceEEEcCCCCcchHHHHHhcCCEEEE----cccCcccCCcc---CHHHHHHhhhh---ccEE
Confidence 6654 342 58888999997766554433322111 11110 11122 78999998876 6788
Q ss_pred EEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCC--cceeecccccc-CCCcceeE
Q 012138 228 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR--PDMVILGKALG-GGVIPVSA 304 (470)
Q Consensus 228 vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~--pdi~s~sK~l~-gG~~~ig~ 304 (470)
+++++++||||.++ +.+.+++|.++|++||+++|+||+|..+...+........+.. .-+.+|||.++ +|+ |+||
T Consensus 140 i~i~~p~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~Gl-RiG~ 217 (350)
T TIGR03537 140 VWINYPHNPTGATA-PRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGY-RSGF 217 (350)
T ss_pred EEEeCCCCCcCccc-CHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccCCccc-ccee
Confidence 88666699999999 9999999999999999999999999865333322211111111 12338999996 898 9999
Q ss_pred EEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecccee-E
Q 012138 305 VLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF-N 382 (470)
Q Consensus 305 v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~-~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~-~ 382 (470)
+++++++.+.+.......+.+.+++.+.++.+++..-. ....+++++++.+.+.+.|++. .+....+.|.+ +
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~------g~~~~~~~g~~~~ 291 (350)
T TIGR03537 218 VAGDEKLISFLRKLRANFGVASPDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKV------GLEYLYPDATFYL 291 (350)
T ss_pred eecCHHHHHHHHHHHHhhccCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC------CCcccCCCeEEEE
Confidence 99999998887654333344455566666655553110 0234455555555565555543 13333455555 4
Q ss_pred EEEeccCCCchhHHHHHHHHHHcCceeccCC------CCEEEEecCCCCCHHHHHHHHHHHHH
Q 012138 383 AVEFDKTALPVSAYDICLKMKERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHD 439 (470)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~~ 439 (470)
++.++.. .++.++++.|.++||.+.|+. .+++|++. ..+++++++++++|++
T Consensus 292 ~~~~~~~---~~~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~~--~~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 292 WVKVPSG---IDAKDYALRLLENGIVVAPGENFGSGEEGYVRVAL--VPTLEECEEALRLWER 349 (350)
T ss_pred EEECCCC---CCHHHHHHHHHHCCEEEcCchhhCCCCCCEEEEEe--cCCHHHHHHHHHHHhc
Confidence 5555432 257889999999999998752 57899994 4688999999998875
No 124
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=6.1e-27 Score=232.97 Aligned_cols=332 Identities=14% Similarity=0.084 Sum_probs=213.8
Q ss_pred CeEEeccCCcccccCCCCCHHHHHHHHHHHHHc---cccCCCCCCCcHHHHHHHHhhhh------CCCeEEecCChhHHH
Q 012138 75 NKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKL---TLSSRAFYNDKFPVFAERLTSMF------GYDMVLPMNTGAEGV 145 (470)
Q Consensus 75 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~------~~~~v~~~~sGteA~ 145 (470)
..++|+..|... ...+|.+.+++.+.+... ..++.....++++.+++++.+.. ..++|++|+|+++++
T Consensus 28 ~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Y~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al 104 (374)
T PRK02610 28 IQLDRLDTNEFP---YDLPPDLKQKLAWLYQQGIESNRYPDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELI 104 (374)
T ss_pred cceeEecCCCCC---CCCCHHHHHHHHHHHhhcccccCCCCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHH
Confidence 358888888543 227789999999877652 11222222344555555555432 345799999999999
Q ss_pred HHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcC-CC
Q 012138 146 ETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG-DQ 224 (470)
Q Consensus 146 ~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~-~~ 224 (470)
..++.+... +++..|++..|+|.+........+... .. .+...+.+.+ |+++|++++++.. .+
T Consensus 105 ~~~~~~~~~---------~g~~~Vlv~~P~y~~~~~~~~~~g~~~-~~---~~~~~~~~~~---d~~~l~~~~~~~~~~~ 168 (374)
T PRK02610 105 RSLLIATCL---------GGEGSILVAEPTFSMYGILAQTLGIPV-VR---VGRDPETFEI---DLAAAQSAIEQTQNPP 168 (374)
T ss_pred HHHHHHHcC---------CCCCeEEEcCCChHHHHHHHHHcCCEE-EE---ecCCcccCCC---CHHHHHHHHHhhcCCC
Confidence 877765543 354478999999976554433332211 10 1111111222 7899999887411 26
Q ss_pred eEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecccccc-CCCccee
Q 012138 225 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPVS 303 (470)
Q Consensus 225 ~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~-gG~~~ig 303 (470)
+++|++.+++||||.++ +++.+++|.++| +|++||+||+|..|.............-..-+.||||.++ +|+ |+|
T Consensus 169 ~k~i~l~~P~NPTG~~~-s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~~g~~Gl-RiG 244 (374)
T PRK02610 169 VRVVFVVHPNSPTGNPL-TAAELEWLRSLP--EDILVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKAFRLAAH-RVG 244 (374)
T ss_pred ceEEEEeCCCCCCCCCC-CHHHHHHHHhcc--CCcEEEEeccccccCccchHHHHhcCCCEEEEEecchhccCccc-cee
Confidence 78887555599999999 888999999887 4999999999998742211111111110112449999996 898 999
Q ss_pred EEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHH---HHHHHHHHHHHHhhCCCceEEEeccce
Q 012138 304 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHL---GEELRQHLFKIQQQFPNYVKEVRGRGL 380 (470)
Q Consensus 304 ~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~---~~~l~~~L~~l~~~~p~~~~~~~~~g~ 380 (470)
|+++++++++.+.... ..++.+.+++.++.++++.. +.+.++.+.. ++.+.+.|+. ++ .+...+..|.
T Consensus 245 ~~v~~~~l~~~l~~~~--~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~----~~-~~~~~p~~g~ 315 (374)
T PRK02610 245 YAIGHPELIAVLEKVR--LPYNLPSFSQLAAQLALEHR--QELLAAIPEILQERDRLYQALQE----LP-QLRVWPSAAN 315 (374)
T ss_pred eeecCHHHHHHHHHhc--CCCCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHh----CC-CcEeCCCcce
Confidence 9999999998886533 34566788888877777532 2222222222 3334344433 33 2333345566
Q ss_pred eEEEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccC
Q 012138 381 FNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
|+++.++.. .+..++++.|.++||.+.+. .+++||+. . +.+++++++++|+++++ ++.
T Consensus 316 f~~~~l~~~---~~~~~~~~~l~~~gi~v~~~-~~~lRls~--~-~~~~~~~~l~~l~~~l~-~~~ 373 (374)
T PRK02610 316 FLYLRLSQD---AALAALHQALKAQGTLVRHT-GGGLRITI--G-TPEENQRTLERLQAALT-QLE 373 (374)
T ss_pred EEEEeCCCC---CCHHHHHHHHHHCCEEEEeC-CCeEEEeC--C-CHHHHHHHHHHHHHHHh-hcC
Confidence 666655432 26788999999999999765 57899994 3 46789999999999988 653
No 125
>PRK09148 aminotransferase; Validated
Probab=99.96 E-value=7.3e-27 Score=234.66 Aligned_cols=338 Identities=13% Similarity=0.124 Sum_probs=223.3
Q ss_pred CCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHc---cccCCCCCCCcHHHHHHHHhhhhC----CC-eEEecCChhHH
Q 012138 73 EGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKL---TLSSRAFYNDKFPVFAERLTSMFG----YD-MVLPMNTGAEG 144 (470)
Q Consensus 73 ~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~----~~-~v~~~~sGteA 144 (470)
.|+.++||..+... ++ .++.+.+++.+.++.. .+.......++++.+++++.+.+| .+ +|++|+|++++
T Consensus 28 ~~~~~i~l~~~~p~--~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~a 104 (405)
T PRK09148 28 AGADIIDLGMGNPD--LP-TPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEG 104 (405)
T ss_pred cCCCeEEcCCCCCC--CC-CCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHH
Confidence 46678899877433 22 4688888888776431 111111233556677777765544 35 79999999999
Q ss_pred HHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecC----CCHHHHHHHHHh
Q 012138 145 VETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF----GDITALEKIFKE 220 (470)
Q Consensus 145 ~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~d~~~Le~~l~~ 220 (470)
+..++..+.. +|+ .|++.+|+|.+........+.. +..++. +++++++++++.
T Consensus 105 l~~~~~~l~~---------~gd-~Vl~~~P~y~~~~~~~~~~g~~-------------v~~v~~~~~~~~~~~l~~~~~~ 161 (405)
T PRK09148 105 FANMAQAITA---------PGD-VILCPNPSYPIHAFGFIMAGGV-------------IRSVPAEPDEEFFPALERAVRH 161 (405)
T ss_pred HHHHHHHhcC---------CCC-EEEEcCCCCcccHHHHHhcCCE-------------EEEEeCCCCCCCccCHHHHHhh
Confidence 9999887754 455 7888899997764433322211 111111 134556666654
Q ss_pred cCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcc-ccccC----CCCcceeeccccc
Q 012138 221 SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWE----EVRPDMVILGKAL 295 (470)
Q Consensus 221 ~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~-~~~~~----~~~pdi~s~sK~l 295 (470)
+..++++++++.++||||.++ +.+.+++|.++|++||++||+||+|..|.+.+..+ ..... +....+.||||.+
T Consensus 162 ~~~~~~~v~l~~P~NPtG~~~-s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~ 240 (405)
T PRK09148 162 SIPKPIALIVNYPSNPTAYVA-DLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTF 240 (405)
T ss_pred ccccceEEEEeCCCCCCCcCC-CHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEecccccc
Confidence 434677777554499999999 89999999999999999999999999765444221 11111 1112245999999
Q ss_pred c-CCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCce
Q 012138 296 G-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYV 372 (470)
Q Consensus 296 ~-gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~ 372 (470)
+ +|+ |+||+++++++++.+.......+++.+.+++.++.+.|+.-++ +.+++.++++.+.+.+.|++++ +
T Consensus 241 ~~pGl-R~G~~v~~~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~~------~ 313 (405)
T PRK09148 241 SMAGW-RMGFAVGNERLIAALTRVKSYLDYGAFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRAG------W 313 (405)
T ss_pred CCcch-heeeeeCCHHHHHHHHHHHHHhccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHcC------C
Confidence 8 998 9999999999998886544434566677787877777752111 3345556666666766666531 2
Q ss_pred EEEecc-ceeEEEEeccCCCchhHHHHHHHHH-HcCceeccCC------CCEEEEecCCCCCHHHHHHHHHHHHHHHhcc
Q 012138 373 KEVRGR-GLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLELD 444 (470)
Q Consensus 373 ~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 444 (470)
....+. |.|+++.+..........++++.|. ++||.+.|+. .+++||+. ..+.+++++++++|.+++. +
T Consensus 314 ~~~~p~~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~--~~~~~~l~~al~~l~~~l~-~ 390 (405)
T PRK09148 314 DIPPPAASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIAL--VENEQRIRQAARNIKRFLS-S 390 (405)
T ss_pred ccCCCCeeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEe--cCCHHHHHHHHHHHHHHHH-H
Confidence 333344 4455555533210113567888876 6799998862 47999995 4689999999999999998 6
Q ss_pred cCC
Q 012138 445 LPK 447 (470)
Q Consensus 445 ~~~ 447 (470)
..+
T Consensus 391 ~~~ 393 (405)
T PRK09148 391 ADE 393 (405)
T ss_pred HHH
Confidence 654
No 126
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.96 E-value=1.5e-26 Score=232.06 Aligned_cols=332 Identities=14% Similarity=0.073 Sum_probs=216.8
Q ss_pred CCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccC-CCCCCCcHHHHHHHHhhhhCC-----C-eEEecCChhHHH
Q 012138 73 EGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSS-RAFYNDKFPVFAERLTSMFGY-----D-MVLPMNTGAEGV 145 (470)
Q Consensus 73 ~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~~-----~-~v~~~~sGteA~ 145 (470)
.|+.++|+..+....+ .++.+.+++.+.+.....++ .....++++.+++++.+.+|. + +|++|+|+++|+
T Consensus 27 ~~~~~i~l~~~~p~~~---~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al 103 (396)
T PRK09147 27 ADLPPISLSIGEPKHP---TPAFIKDALAANLDGLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREAL 103 (396)
T ss_pred cCCCeEecCCCCCCCC---CCHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHH
Confidence 4788899988854322 57888898887765433222 122345677777777665552 3 799999999999
Q ss_pred HHHHHHHHHhchhcccCCC-C-CcEEEEEccCccccccchhcccCCcccccCCCCCCCC-eeeecCCCHHHHHHHHHhcC
Q 012138 146 ETALKLARKWGYVKKKFSI-D-EAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-HLKVDFGDITALEKIFKESG 222 (470)
Q Consensus 146 ~~al~~~~~~~~~~~~~~~-g-~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~Le~~l~~~~ 222 (470)
..+++++.. + + ++.|++..|+|.+........+.. ... .|..++ .+.+ |+++|++.+.+
T Consensus 104 ~~~~~~l~~---------~~~~gd~vlv~~P~y~~~~~~~~~~g~~-~~~---vp~~~~~~~~~---d~~~l~~~~~~-- 165 (396)
T PRK09147 104 FAFAQTVID---------RDGPGPLVVCPNPFYQIYEGAALLAGAE-PYF---LNCDPANNFAP---DFDAVPAEVWA-- 165 (396)
T ss_pred HHHHHHHcC---------CCCCCCEEEEcCCCccchHHHHHhcCCE-EEE---eccCccccCcc---CHHHHHHHHhh--
Confidence 999987764 3 1 247888899997654433222221 111 111111 1122 78999887765
Q ss_pred CCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCC--ccc-c---ccCC-----CCcceeec
Q 012138 223 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR--MLA-S---DWEE-----VRPDMVIL 291 (470)
Q Consensus 223 ~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~--~~~-~---~~~~-----~~pdi~s~ 291 (470)
+++++++..++||||.++ +++.+++|.++|++||++||+||+|..|.+.+. ... . ...+ ...-+.||
T Consensus 166 -~~k~i~l~nP~NPTG~~~-s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~ 243 (396)
T PRK09147 166 -RTQLLFVCSPGNPTGAVL-PLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSL 243 (396)
T ss_pred -ccEEEEEcCCCCCcCccC-CHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEecc
Confidence 677777444499999999 999999999999999999999999997654442 111 1 0111 11123499
Q ss_pred ccccc-CCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHhhCC
Q 012138 292 GKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFP 369 (470)
Q Consensus 292 sK~l~-gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~p 369 (470)
||.++ +|+ |+||+++++++++.+.......+++.+++.+.++.+.+..-.. ...++.++++.+.+.+.|++.
T Consensus 244 SK~~~~~Gl-RiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~----- 317 (396)
T PRK09147 244 SKRSNVPGL-RSGFVAGDAALLKKFLLYRTYHGCAMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAPV----- 317 (396)
T ss_pred ccccCCccc-eeeeecCCHHHHHHHHHHhhhcccCCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHh-----
Confidence 99875 898 9999999999988776433334456777777777666631100 223344455555555555442
Q ss_pred CceEEEec-cceeEEEEeccCCCchhHHHHHHHHH-HcCceeccCC------------CCEEEEecCCCCCHHHHHHHHH
Q 012138 370 NYVKEVRG-RGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH------------DTIVRLTPPLSISSNELQEGSK 435 (470)
Q Consensus 370 ~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------------~~~iR~~~~~~~t~e~i~~~~~ 435 (470)
+....+ .|.++++.+. . +..++++.|. ++||.+.|+. .+++|++ +..++++++++++
T Consensus 318 --~~~~~p~~g~f~~~~~~--~---~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~--~~~~~~~l~~~l~ 388 (396)
T PRK09147 318 --LDVQLPDAGFYLWAKVP--G---DDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIA--LVAPLAECVEAAE 388 (396)
T ss_pred --cCCCCCCeeEEEEEECC--C---CHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEE--ecCCHHHHHHHHH
Confidence 122233 4555555543 2 4577888876 5699997752 4789999 4567899999999
Q ss_pred HHHHHHh
Q 012138 436 ALHDVLE 442 (470)
Q Consensus 436 ~l~~~l~ 442 (470)
+|.++++
T Consensus 389 rl~~~~~ 395 (396)
T PRK09147 389 RIVDFCR 395 (396)
T ss_pred HHHHHhc
Confidence 9998875
No 127
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.96 E-value=1.2e-26 Score=235.15 Aligned_cols=328 Identities=14% Similarity=0.109 Sum_probs=214.4
Q ss_pred eEEeccCCcccccCCCCCHHHHHHHHHHHHHccccC-CCCCCCcHHHHHHHHhhhhC-CCeEEecCChhHHHHHHHHHHH
Q 012138 76 KYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSS-RAFYNDKFPVFAERLTSMFG-YDMVLPMNTGAEGVETALKLAR 153 (470)
Q Consensus 76 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~-~~~v~~~~sGteA~~~al~~~~ 153 (470)
..+||..+. +.....|.+.+++.+.......++ .....++++.+++++....+ .++|++|+|+++|+..+++++.
T Consensus 86 ~~i~L~~g~---p~~~~~p~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~ 162 (431)
T PRK15481 86 PLHDLAGGN---PDPQRLPDLSRYFARLSRTPRLYGDAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAHL 162 (431)
T ss_pred hhhhhhcCC---CChhHhHHHHHHHHHhhhhhhhcCCcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHhC
Confidence 456666662 222234667777766554332221 11223344455555443333 3589999999999999999776
Q ss_pred HhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEcc-
Q 012138 154 KWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEP- 232 (470)
Q Consensus 154 ~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~ep- 232 (470)
. +|+ .|++.+|+|.+........+..... .+...+ .+ |+++|++++++ +++++++.|
T Consensus 163 ~---------pgd-~Vlv~~P~y~~~~~~~~~~g~~~~~----v~~~~~--g~---~~~~l~~~~~~---~~k~i~~~p~ 220 (431)
T PRK15481 163 L---------PGD-SVAVEDPCFLSSINMLRYAGFSASP----VSVDAE--GM---QPEKLERALAQ---GARAVILTPR 220 (431)
T ss_pred C---------CCC-EEEEeCCCcHHHHHHHHHcCCeEEe----eccCCC--CC---CHHHHHHHHhc---CCCEEEECCC
Confidence 5 555 8899999997665444433322110 111111 12 78999998875 577777653
Q ss_pred ccCCCccccCChhhHHHHHHHHHhc-CcEEEEeccccCCcccCCcccccc-CCCCcceeeccccccCCCcceeEEEecHH
Q 012138 233 IQGEAGVIIPPDGYLKAVRDLCSKY-NILMIADEIQSGLARSGRMLASDW-EEVRPDMVILGKALGGGVIPVSAVLADKE 310 (470)
Q Consensus 233 i~n~~G~~~~~~~~l~~l~~l~~~~-gillI~Dev~~g~g~~G~~~~~~~-~~~~pdi~s~sK~l~gG~~~ig~v~~~~~ 310 (470)
+|||||.++ +.+.+++|.++|++| +++||+||+|..|...+....... .....-+-||||.+++|+ |+||++++++
T Consensus 221 p~NPTG~~~-s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~Gl-RiG~~i~~~~ 298 (431)
T PRK15481 221 AHNPTGCSL-SARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALGPDL-RLAFVASDSA 298 (431)
T ss_pred CCCCCCccC-CHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeeccccCCCc-eeEEEeCCHH
Confidence 599999999 999999999999999 999999999998753331111111 111112349999999999 9999999999
Q ss_pred HHhhcCcCCccCCCCCCHHHHHHHHHHHHHHh--h--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecc-ceeEEEE
Q 012138 311 VMLCIQPGEHGSTFGGNPLASAVAIASLDVIR--D--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGR-GLFNAVE 385 (470)
Q Consensus 311 ~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~--~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~-g~~~~~~ 385 (470)
+++.+.......+++.+.+++.++.++|+.-. + ..+++.++++.+.+.+.|++. .+....+. |.|+++.
T Consensus 299 ~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~------~~~~~~p~gg~f~~~~ 372 (431)
T PRK15481 299 TSARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY------GIAIPSPGDGLNLWLP 372 (431)
T ss_pred HHHHHHHHHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc------CCccccCCCeEEEEEE
Confidence 98888543333445578888888887775311 0 234555566666666666553 12222344 4555544
Q ss_pred eccCCCchhHHHHHHHHHHcCceeccCC-------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 386 FDKTALPVSAYDICLKMKERGILAKPTH-------DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 386 ~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
+. . +..++++.|.++||.+.|+. .+++||++.. .+++++++++++|.+++.
T Consensus 373 l~--~---~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 373 LD--T---DSQATALTLAKSGWLVREGEAFGVSAPSHGLRITLST-LNDAEINRLAADLHQALN 430 (431)
T ss_pred CC--C---CHHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCC-CChHHHHHHHHHHHHHhc
Confidence 43 2 45788999999999998852 3589999653 578999999999999876
No 128
>PRK09082 methionine aminotransferase; Validated
Probab=99.96 E-value=5.2e-27 Score=234.58 Aligned_cols=330 Identities=14% Similarity=0.162 Sum_probs=221.0
Q ss_pred eEEeccCCcccccCCCCCHHHHHHHHHHHHHccc--cCCCCCCCcHHHHHHHHhhhhCC-----CeEEecCChhHHHHHH
Q 012138 76 KYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTL--SSRAFYNDKFPVFAERLTSMFGY-----DMVLPMNTGAEGVETA 148 (470)
Q Consensus 76 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~-----~~v~~~~sGteA~~~a 148 (470)
.++||..|... ...++.+.+++.+.++.... .......++++.+++++.+.++. +++++|+|+++|+..+
T Consensus 31 ~~i~l~~g~~~---~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~ 107 (386)
T PRK09082 31 GAINLSQGFPD---FDGPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFAA 107 (386)
T ss_pred CEEEecCCCCC---CCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHH
Confidence 46788887543 22578899998887764322 11222345677888888877654 2699999999999999
Q ss_pred HHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEE
Q 012138 149 LKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGF 228 (470)
Q Consensus 149 l~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~v 228 (470)
+..+.. +|+ .|++..++|.+........+. ..... +...+...+ |++++++++++ ++++|
T Consensus 108 ~~~~~~---------~gd-~Vli~~p~y~~~~~~~~~~g~-~~~~~---~~~~~~~~~---d~~~l~~~~~~---~~~~v 167 (386)
T PRK09082 108 ILALVR---------PGD-EVIVFDPSYDSYAPAIELAGG-RAVRV---ALQPPDFRV---DWQRFAAAISP---RTRLI 167 (386)
T ss_pred HHHHcC---------CCC-EEEEeCCCchhhHHHHHHcCC-EEEEE---ecCcccccC---CHHHHHHhcCc---cceEE
Confidence 987654 455 788888887654332222211 11110 110111122 78999988865 67888
Q ss_pred EEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCc-cc-cccCCCCc---ceeecccccc-CCCcce
Q 012138 229 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LA-SDWEEVRP---DMVILGKALG-GGVIPV 302 (470)
Q Consensus 229 i~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~-~~-~~~~~~~p---di~s~sK~l~-gG~~~i 302 (470)
+++.++||+|.++ +++.+++|.++|++||+++|+||+|..+.+.+.. .. ....+... -+.+|||.++ +|+ |+
T Consensus 168 ~l~~p~NPtG~~~-~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~-Ri 245 (386)
T PRK09082 168 ILNTPHNPSGTVW-SAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGW-KV 245 (386)
T ss_pred EEeCCCCCCCcCC-CHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhh-hh
Confidence 8666699999999 8999999999999999999999999876544321 11 11122221 2349999996 898 99
Q ss_pred eEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccce
Q 012138 303 SAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL 380 (470)
Q Consensus 303 g~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~ 380 (470)
||+++++++++.+........++.+.+.+.++.+.++...+ +.+++.++++.+.+.+.|++. .+....+.|.
T Consensus 246 G~iv~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~------~~~~~~~~g~ 319 (386)
T PRK09082 246 GYCVAPAALSAEFRKVHQYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANS------RFKLLPCEGT 319 (386)
T ss_pred hhhhCCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhC------CCcccCCCee
Confidence 99999999998887654445667788887777666642111 234555667777777777653 2333345666
Q ss_pred eEEE-EeccCCCchhHHHHHHHH-HHcCceeccCC--------CCEEEEecCCCCCHHHHHHHHHHHHH
Q 012138 381 FNAV-EFDKTALPVSAYDICLKM-KERGILAKPTH--------DTIVRLTPPLSISSNELQEGSKALHD 439 (470)
Q Consensus 381 ~~~~-~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~--------~~~iR~~~~~~~t~e~i~~~~~~l~~ 439 (470)
++.| .+.... +.+..++++.| .+.||.+.|+. .+++|++. ..+++++++++++|++
T Consensus 320 ~~~~~~~~~~~-~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~--~~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 320 YFQLVDYSAIS-DLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCF--AKQEETLDAAAERLCQ 385 (386)
T ss_pred EEEEEeccccC-CCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEe--cCCHHHHHHHHHHHhh
Confidence 5555 543211 13577898887 46699988763 36899995 4689999999999875
No 129
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.96 E-value=1.3e-26 Score=231.77 Aligned_cols=330 Identities=14% Similarity=0.171 Sum_probs=214.8
Q ss_pred CCeEEeccCCcccccCCCCCHHHHHHHHHHHHHcc---ccCCCCCCCcHHHHHHHHhhhhC----CC-eEEecCChhHHH
Q 012138 74 GNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLT---LSSRAFYNDKFPVFAERLTSMFG----YD-MVLPMNTGAEGV 145 (470)
Q Consensus 74 G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~----~~-~v~~~~sGteA~ 145 (470)
|..++|+..+.... ..++.+.+++.+.+.... +.......++++.+++++.+.+| .+ .+++|+|+++++
T Consensus 30 ~~~~i~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i 106 (385)
T PRK09276 30 GVDVISLGIGDPDL---PTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGI 106 (385)
T ss_pred CCCEEEecCCCCCC---CCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHH
Confidence 44567888774332 257888999988876421 11111223456666666665444 33 488899999999
Q ss_pred HHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCC-eeeecCCCHHHHHHHHHhcCCC
Q 012138 146 ETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-HLKVDFGDITALEKIFKESGDQ 224 (470)
Q Consensus 146 ~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~Le~~l~~~~~~ 224 (470)
..+++.+.. +|+ .|++.+|+|.+........+.. ... .+...+ ...+ |++++++.+.+ +
T Consensus 107 ~~~~~~~~~---------~gd-~Vl~~~P~y~~~~~~~~~~g~~-~~~---v~~~~~~g~~~---d~~~l~~~~~~---~ 166 (385)
T PRK09276 107 AHIPLAFVN---------PGD-VVLVPDPGYPVYKIGTIFAGGE-PYF---MPLKEENGFLP---DLDAIPEDVAK---K 166 (385)
T ss_pred HHHHHHhCC---------CCC-EEEEcCCCCcChHHHHHHcCCE-EEE---EecCCCCCCcC---CHHHHHHhccc---c
Confidence 999887754 455 7888999986654433322221 110 011111 1112 78888887764 6
Q ss_pred eEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCc----ccccc-CCCCcceeecccccc-CC
Q 012138 225 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM----LASDW-EEVRPDMVILGKALG-GG 298 (470)
Q Consensus 225 ~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~----~~~~~-~~~~pdi~s~sK~l~-gG 298 (470)
+++|++++++||||.++ +.+.+++|.++|++||++||+||+|..|...+.. ...+. .+....+.||||.++ +|
T Consensus 167 ~~~v~l~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G 245 (385)
T PRK09276 167 AKLMFINYPNNPTGAVA-DLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTG 245 (385)
T ss_pred ceEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcc
Confidence 78888665599999999 9999999999999999999999999976544321 11111 122234569999997 89
Q ss_pred CcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEe
Q 012138 299 VIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR 376 (470)
Q Consensus 299 ~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~ 376 (470)
+ |+||+++++++++.+.........+.+.+.+.++..+++..+. +.+++.++++++.+.+.|+++ .+....
T Consensus 246 l-RiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~------~~~~~~ 318 (385)
T PRK09276 246 W-RIGFAVGNADLIAGLGKVKSNVDSGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKL------GLEVEP 318 (385)
T ss_pred h-hheeeeCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhC------CCcccC
Confidence 8 9999999999988876533222334556666666666642211 334555666666676666653 133334
Q ss_pred cccee-EEEEeccCCCchhHHHHHHHHHH-cCceeccCC------CCEEEEecCCCCCHHHHHHHHHHHHH
Q 012138 377 GRGLF-NAVEFDKTALPVSAYDICLKMKE-RGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHD 439 (470)
Q Consensus 377 ~~g~~-~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~~ 439 (470)
+.|.+ +++.++.. .+..+++++|++ +||.+.|+. ++++||++ ..+++++.+++++|.+
T Consensus 319 ~~~~~~~~v~~~~~---~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~--~~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 319 PKATFYVWAPVPKG---YTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIAL--TVPDERIEEAVERIKK 384 (385)
T ss_pred CCcceEEEEECCCC---CCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEe--CCCHHHHHHHHHHHhh
Confidence 55555 45544432 267788888875 699998862 47999995 4678888888888764
No 130
>PRK08068 transaminase; Reviewed
Probab=99.96 E-value=1.3e-26 Score=231.93 Aligned_cols=330 Identities=15% Similarity=0.118 Sum_probs=214.6
Q ss_pred CCeEEeccCCcccccCCCCCHHHHHHHHHHHHHcc---ccCCCCCCCcHHHHHHHHhhhhC----CC-eEEecCChhHHH
Q 012138 74 GNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLT---LSSRAFYNDKFPVFAERLTSMFG----YD-MVLPMNTGAEGV 145 (470)
Q Consensus 74 G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~----~~-~v~~~~sGteA~ 145 (470)
|..++||..+. +....+|.+.+++.+.++... +.+.....++++++++++.+.+| .+ +|++|+|+++++
T Consensus 31 ~~~~i~l~~~~---p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l 107 (389)
T PRK08068 31 GHDVINLGQGN---PDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGL 107 (389)
T ss_pred CCCeEEecCCC---CCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHH
Confidence 44578888773 334467889999988876421 11122234456666666654434 35 699999999999
Q ss_pred HHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCC-eeeecCCCHHHHHHHHHhcCCC
Q 012138 146 ETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-HLKVDFGDITALEKIFKESGDQ 224 (470)
Q Consensus 146 ~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~Le~~l~~~~~~ 224 (470)
..++.++.. +|+ .|++..|+|..........+..... .+...+ ...+ |++++++.+.+ +
T Consensus 108 ~~~~~~~~~---------~gd-~vlv~~P~y~~~~~~~~~~g~~~~~----i~~~~~~~~~~---d~~~l~~~~~~---~ 167 (389)
T PRK08068 108 VELPQCLMN---------PGD-TILVPDPGYPDYLSGVALARAQFET----MPLIAENNFLP---DYTKIPEEVAE---K 167 (389)
T ss_pred HHHHHHhCC---------CCC-EEEEcCCCCcchHHHHHhcCCEEEE----eecccccCCCC---CHHHHHHhccc---c
Confidence 988876654 455 7888999986554433322221100 111111 1111 68888888754 6
Q ss_pred eEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCC-ccc-cccCCC---Ccceeecccccc-CC
Q 012138 225 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLA-SDWEEV---RPDMVILGKALG-GG 298 (470)
Q Consensus 225 ~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~-~~~-~~~~~~---~pdi~s~sK~l~-gG 298 (470)
+++|++..++||||.++ +.+.+++|.++|++||++||+||+|..|.+.+. ... ....+. ...+.||||.++ +|
T Consensus 168 ~~~v~l~~P~NPTG~~~-s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~G 246 (389)
T PRK08068 168 AKLMYLNYPNNPTGAVA-TKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAG 246 (389)
T ss_pred ceEEEEECCCCCCCCcC-CHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCcc
Confidence 77777543399999999 999999999999999999999999987765542 211 121221 123459999997 89
Q ss_pred CcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEe
Q 012138 299 VIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR 376 (470)
Q Consensus 299 ~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~ 376 (470)
+ |+||+++++++++.+.........+.+++.+.++.+++..-.+ +.+++.++++++.+.+.|++++ +...+
T Consensus 247 l-RiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~g------~~~~~ 319 (389)
T PRK08068 247 W-RVAFAVGNESVIEAINLLQDHLFVSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREIG------WEVDA 319 (389)
T ss_pred c-eeEeEecCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC------CcccC
Confidence 8 9999999999998876443322334444455555555531111 3456666667777777776531 33345
Q ss_pred ccceeE-EEEeccCCCchhHHHHHHHHHH-cCceeccCC------CCEEEEecCCCCCHHHHHHHHHHHHH
Q 012138 377 GRGLFN-AVEFDKTALPVSAYDICLKMKE-RGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHD 439 (470)
Q Consensus 377 ~~g~~~-~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~~ 439 (470)
+.|.++ ++.++.. .++.++++.|++ +||.+.|+. .+++||+. ..+++.+.+++++|.+
T Consensus 320 ~~g~~~~~v~~~~~---~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~--~~~~~~l~~al~~l~~ 385 (389)
T PRK08068 320 PKGSFFAWMPVPKG---YTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGL--LTDEERLREAVERIGK 385 (389)
T ss_pred CCeeEEEEEECCCC---CCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEE--cCCHHHHHHHHHHHHH
Confidence 666655 5555432 267889999986 599998752 57999995 4677888888888865
No 131
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.96 E-value=1.7e-26 Score=230.84 Aligned_cols=330 Identities=15% Similarity=0.184 Sum_probs=216.5
Q ss_pred CCeEEeccCCcccccCCCCCHHHHHHHHHHHHHcc---ccCCCCCCCcHHHHHHHHhhhhCC----C-eEEecCChhHHH
Q 012138 74 GNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLT---LSSRAFYNDKFPVFAERLTSMFGY----D-MVLPMNTGAEGV 145 (470)
Q Consensus 74 G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~----~-~v~~~~sGteA~ 145 (470)
|..++||..|... ++ .++.+.+++.+.+.... +.......++++.+++++.+.++. + .|++|+|+++++
T Consensus 28 ~~~~~~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l 104 (383)
T TIGR03540 28 GVDVISLGIGDPD--LP-TPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGI 104 (383)
T ss_pred CCCeEEeCCCCCC--CC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHH
Confidence 5567788877533 22 57888898888775321 111112234566677776655432 4 588999999999
Q ss_pred HHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCC-eeeecCCCHHHHHHHHHhcCCC
Q 012138 146 ETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-HLKVDFGDITALEKIFKESGDQ 224 (470)
Q Consensus 146 ~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~Le~~l~~~~~~ 224 (470)
..+++.+.. +|+ .|++..|+|.+........+... .. .+...+ ...+ |++++++.+.+ +
T Consensus 105 ~~~~~~~~~---------~gd-~vlv~~P~y~~~~~~~~~~G~~v-~~---v~~~~~~g~~~---d~~~l~~~~~~---~ 164 (383)
T TIGR03540 105 AHIPLAFVN---------PGD-IVLVPDPGYPVYRIGTLFAGGEP-YE---MPLKEENGFLP---DFDAIPEDIAK---K 164 (383)
T ss_pred HHHHHHhCC---------CCC-EEEEeCCCCcchHHHHHhcCCEE-EE---EecCcccCCcc---CHHHHHhhccc---c
Confidence 999887654 455 88889999877654433332211 10 011111 1112 78888888764 6
Q ss_pred eEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCc-cc---ccc-CCCCcceeecccccc-CC
Q 012138 225 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LA---SDW-EEVRPDMVILGKALG-GG 298 (470)
Q Consensus 225 ~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~-~~---~~~-~~~~pdi~s~sK~l~-gG 298 (470)
+++|+++.++||||.++ +.+.+++|.++|++||++||+||+|..+.+.+.. .. .+. .+....+.+|||.++ +|
T Consensus 165 ~~~v~i~~P~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~G 243 (383)
T TIGR03540 165 AKLMFINYPNNPTGAVA-PLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTG 243 (383)
T ss_pred ceEEEEeCCCCCcCccC-CHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCcc
Confidence 78888664499999999 9999999999999999999999999976544421 11 111 112234559999997 89
Q ss_pred CcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEe
Q 012138 299 VIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR 376 (470)
Q Consensus 299 ~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~ 376 (470)
+ |+||+++++++++.+.........+.+.+.+.++.++++...+ +.+++.++++.+.+.+.|++. .+....
T Consensus 244 l-RiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~------~~~~~~ 316 (383)
T TIGR03540 244 W-RIGMAVGNADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKI------GIDVEK 316 (383)
T ss_pred c-eeeEEeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC------CCEecC
Confidence 8 9999999999988876433323334566667776666643211 334555666666666666653 233344
Q ss_pred cccee-EEEEeccCCCchhHHHHHHHHH-HcCceeccCC------CCEEEEecCCCCCHHHHHHHHHHHHH
Q 012138 377 GRGLF-NAVEFDKTALPVSAYDICLKMK-ERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHD 439 (470)
Q Consensus 377 ~~g~~-~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~~ 439 (470)
+.|.+ +++.++.. .+..+++++|. ++||.+.|+. .+++||+. ..+++++++++++|.+
T Consensus 317 ~~~~~~~~~~l~~~---~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~--~~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 317 PKATFYVWVPVPEG---YTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISL--TVPDERLEEAVARIKK 382 (383)
T ss_pred CCcceEEEEECCCC---CCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEe--cCCHHHHHHHHHHHhh
Confidence 55555 55554432 36778999875 5799998762 47899995 4678889988888864
No 132
>PRK08960 hypothetical protein; Provisional
Probab=99.96 E-value=3.7e-26 Score=228.59 Aligned_cols=332 Identities=14% Similarity=0.119 Sum_probs=218.1
Q ss_pred CCeEEeccCCcccccCCCCCHHHHHHHHHHHHHcc--ccCCCCCCCcHHHHHHHHhhhh----CCCeEEecCChhHHHHH
Q 012138 74 GNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLT--LSSRAFYNDKFPVFAERLTSMF----GYDMVLPMNTGAEGVET 147 (470)
Q Consensus 74 G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~----~~~~v~~~~sGteA~~~ 147 (470)
|..++++..|....+ .++.+.+++.+.+.... +.+.....++++.+++++.+.+ ..++|++|+|+++|+..
T Consensus 31 ~~~~i~l~~g~~~~~---~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~ 107 (387)
T PRK08960 31 GHDVIHLEIGEPDFT---TAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLL 107 (387)
T ss_pred CCCeEEeCCCCCCCC---CCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHH
Confidence 445678877755422 57889999988886421 1111223345566666665443 35689999999999999
Q ss_pred HHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCC-eeeecCCCHHHHHHHHHhcCCCeE
Q 012138 148 ALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-HLKVDFGDITALEKIFKESGDQIA 226 (470)
Q Consensus 148 al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~Le~~l~~~~~~~~ 226 (470)
++.++.. +|+ .|++.+++|............. ... .+...+ ...+ |++++++++++ +++
T Consensus 108 ~~~~~~~---------~gd-~vlv~~p~y~~~~~~~~~~g~~-~~~---v~~~~~~~~~~---d~~~l~~~~~~---~~~ 167 (387)
T PRK08960 108 ASSLLVD---------PGK-HWLLADPGYPCNRHFLRLVEGA-AQL---VPVGPDSRYQL---TPALVERHWNA---DTV 167 (387)
T ss_pred HHHHhcC---------CCC-EEEEcCCCCcchHHHHHhcCCe-EEE---EecCcccCCCC---CHHHHHHHhCc---cce
Confidence 9987654 455 7888999986654433322211 110 111111 1112 78999988875 455
Q ss_pred EEE-EccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCccee---ecccccc-CCCcc
Q 012138 227 GFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV---ILGKALG-GGVIP 301 (470)
Q Consensus 227 ~vi-~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~---s~sK~l~-gG~~~ 301 (470)
+++ ++| +||||.++ +.+.+++|+++|++||+++|+||+|.++.+.+.... .....++++ ||||.++ +|+ |
T Consensus 168 ~i~i~~p-~NPtG~~~-~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~--~~~~~~~vi~~~S~SK~~g~~Gl-R 242 (387)
T PRK08960 168 GALVASP-ANPTGTLL-SRDELAALSQALRARGGHLVVDEIYHGLTYGVDAAS--VLEVDDDAFVLNSFSKYFGMTGW-R 242 (387)
T ss_pred EEEEECC-CCCCCcCc-CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCC--hhhccCCEEEEeecccccCCccc-E
Confidence 555 565 99999999 899999999999999999999999998754432211 122334443 7999997 898 9
Q ss_pred eeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHH-Hhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecc
Q 012138 302 VSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDV-IRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGR 378 (470)
Q Consensus 302 ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~-~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~ 378 (470)
+||+++++++++.+.......+.+.+.+.+.++.++++. ..+ ..+++.++++.+.+.+.|++. + ......+.
T Consensus 243 iG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~----~-~~~~~~p~ 317 (387)
T PRK08960 243 LGWLVAPPAAVPELEKLAQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALREL----G-FGIAVEPQ 317 (387)
T ss_pred EEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhc----C-CcCCcCCC
Confidence 999999999998876544444556688888887777742 111 233444555566666666553 1 11112344
Q ss_pred -ceeEEEEeccCCCchhHHHHHHHHH-HcCceeccCC-------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 379 -GLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH-------DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 379 -g~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~-------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
|.|+++.+.... .+..+++++|. ++||.+.|+. ++++|+++. .+.+++.+++++|.++++
T Consensus 318 g~~f~~~~~~~~~--~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~--~~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 318 GAFYLYADISAFG--GDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYT--QSLPRLQEAVERIARGLR 386 (387)
T ss_pred eeEEEEEeccccC--CCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHh
Confidence 455555554311 25678888876 5699998762 469999965 478899999999988775
No 133
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=8.1e-27 Score=230.81 Aligned_cols=322 Identities=14% Similarity=0.141 Sum_probs=221.4
Q ss_pred CCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHHH
Q 012138 74 GNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKL 151 (470)
Q Consensus 74 G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~~ 151 (470)
++.++|+..|... ++ .+|++.+++.+.+..... |+..-..++.+.++++++ .++|++++|+++++..++++
T Consensus 28 ~~~~i~l~~nen~--~~-~~~~v~~a~~~~~~~~~~----Yp~~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~~~ 100 (366)
T PRK01533 28 DHSFVKLASNENP--FG-CSPRVLDELQKSWLDHAL----YPDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQIISRA 100 (366)
T ss_pred CCceEEeCCCCCC--CC-CCHHHHHHHHHHHHhcCc----CCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHH
Confidence 4567898887533 33 788999999887655432 223334667777777775 56899999999999999987
Q ss_pred HHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEc
Q 012138 152 ARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFE 231 (470)
Q Consensus 152 ~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~e 231 (470)
+.. +|+ .|++..|+|.+....+...+.. ... .+.. ...+ |+++|++++++ +++++++.
T Consensus 101 l~~---------~gd-~vlv~~P~y~~~~~~~~~~g~~-v~~---v~~~--~~~~---d~~~l~~~~~~---~~~~v~i~ 158 (366)
T PRK01533 101 VLK---------AGD-NIVTAGATFPQYRHHAIIEGCE-VKE---VALN--NGVY---DLDEISSVVDN---DTKIVWIC 158 (366)
T ss_pred hcC---------CCC-EEEEcCCcHHHHHHHHHHcCCE-EEE---eecC--CCCc---CHHHHHHHhCc---CCcEEEEe
Confidence 754 455 7888899986654433322211 110 0110 0112 79999988865 56666644
Q ss_pred cccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcc-ccccCCCCc---ceeecccccc-CCCcceeEEE
Q 012138 232 PIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWEEVRP---DMVILGKALG-GGVIPVSAVL 306 (470)
Q Consensus 232 pi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~-~~~~~~~~p---di~s~sK~l~-gG~~~ig~v~ 306 (470)
.++||||.++ +.+.+++|.++|++++ ++|+||+|..|...+... ........+ -+.||||.++ +|+ |+||++
T Consensus 159 ~P~NPTG~~~-~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~Gl-RiG~~i 235 (366)
T PRK01533 159 NPNNPTGTYV-NDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASF-RVGYAV 235 (366)
T ss_pred CCCCCCCCCc-CHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHH-HHhHHh
Confidence 4499999999 8999999999999877 567799998764332110 011111112 2349999999 998 999999
Q ss_pred ecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEE
Q 012138 307 ADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE 385 (470)
Q Consensus 307 ~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~-~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~ 385 (470)
+++++++.+.... ..++.+.+++.++.++|+.-+ .+.+.+..++..+++.+.++.+ .+....+.|.|+++.
T Consensus 236 ~~~~~~~~l~~~~--~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~------g~~~~~~~~nf~~~~ 307 (366)
T PRK01533 236 GHEELIEKLNVVR--LPFNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKEN------EIPFYQSQTNFIFLP 307 (366)
T ss_pred CCHHHHHHHHHhc--CCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC------CCccCCCcCcEEEEe
Confidence 9999998886433 457889999999988885211 0223334444444454444443 233446788888887
Q ss_pred eccCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccC
Q 012138 386 FDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 386 ~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
+. ++.++.+.|+++||.+.+. ++++|++ ..+.++.++++++|+++++ ..+
T Consensus 308 ~~------~~~~~~~~l~~~GI~Vr~~-~~~iRis---~~~~~~~~~l~~al~~~~~-~~~ 357 (366)
T PRK01533 308 VE------NGGEIYEACAHAGFIIRPF-PNGVRIT---VGTREQNEGVISVLQQHFE-NKK 357 (366)
T ss_pred CC------CHHHHHHHHHHCCcEEccC-CCceEEe---CCCHHHHHHHHHHHHHHHH-hcc
Confidence 63 3467999999999999986 6889999 5788999999999999988 443
No 134
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.95 E-value=2.1e-27 Score=223.61 Aligned_cols=320 Identities=16% Similarity=0.197 Sum_probs=227.6
Q ss_pred CCHHHHHHHHHHHHHcc--ccCC-CCCCCcHHHHHHHHhhhhC-----CCeEEecCChhHHHHHHHHHHHHhchhcccCC
Q 012138 92 CHPKIMKALQEQAEKLT--LSSR-AFYNDKFPVFAERLTSMFG-----YDMVLPMNTGAEGVETALKLARKWGYVKKKFS 163 (470)
Q Consensus 92 ~~p~v~~a~~~~~~~~~--~~~~-~~~~~~~~~l~~~l~~~~~-----~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~ 163 (470)
.+..|.+++.+.++... .+++ ....+++..|++.++++++ .++|++|+|+.+|+..++.....
T Consensus 45 ~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~--------- 115 (420)
T KOG0257|consen 45 PPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLN--------- 115 (420)
T ss_pred CcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcC---------
Confidence 56778888888887641 1222 2356678888999988764 45799999999999999988876
Q ss_pred CCCcEEEEEccCccccccchhcccCCccccc---CCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccc
Q 012138 164 IDEAIIVSCCGCFHGRTLAAISMSCDNEAIR---GFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVI 240 (470)
Q Consensus 164 ~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~ 240 (470)
+|| .||+++|.|..+......+++.+.+.. ..+....+.+.+ |.++||.++++ +|++|+++.++||+|.+
T Consensus 116 ~GD-eVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~---D~~~le~~~t~---kTk~Ii~ntPhNPtGkv 188 (420)
T KOG0257|consen 116 PGD-EVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTL---DPEELESKITE---KTKAIILNTPHNPTGKV 188 (420)
T ss_pred CCC-EEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccC---ChHHHHhhccC---CccEEEEeCCCCCcCcc
Confidence 566 778888888766665555555433311 111111223333 89999999998 89999977769999999
Q ss_pred cCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCc---cccc--cCCCCcceeecccccc-CCCcceeEEEecHHHHhh
Q 012138 241 IPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM---LASD--WEEVRPDMVILGKALG-GGVIPVSAVLADKEVMLC 314 (470)
Q Consensus 241 ~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~---~~~~--~~~~~pdi~s~sK~l~-gG~~~ig~v~~~~~~~~~ 314 (470)
+ ++++|++|+++|++||+++|+||||.-+.+.|.- ++.. .+.....+.++||.++ .|+ |+||+++++.++..
T Consensus 189 f-sReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGW-rlGW~igp~~L~~~ 266 (420)
T KOG0257|consen 189 F-SREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGW-RLGWAIGPKHLYSA 266 (420)
T ss_pred c-CHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeee-eeeeeechHHhhhh
Confidence 9 9999999999999999999999999977777752 2211 1223345669999999 899 99999999988888
Q ss_pred cCcCCccCCCCCCHHHHHHHHHHHHHHh---h-------hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEE
Q 012138 315 IQPGEHGSTFGGNPLASAVAIASLDVIR---D-------EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV 384 (470)
Q Consensus 315 ~~~~~~~~t~~~~~~~~aaa~a~l~~~~---~-------~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~ 384 (470)
..+......|..+...+.|..+++..-. + .++.+.++++++.+.+.|.+++ +....++|.++.|
T Consensus 267 ~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg------~~v~~p~gayyl~ 340 (420)
T KOG0257|consen 267 LFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEELG------LKVTGPEGAYYLW 340 (420)
T ss_pred HHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhcC------CccccCCCceEEE
Confidence 8776666667655555555444444311 1 2367778889999999998873 3344677777766
Q ss_pred EeccC--CC---------chhHHHHHHHHHHc-CceeccCC-----------CCEEEEecCCCCCHHHHHHHHHHHH
Q 012138 385 EFDKT--AL---------PVSAYDICLKMKER-GILAKPTH-----------DTIVRLTPPLSISSNELQEGSKALH 438 (470)
Q Consensus 385 ~~~~~--~~---------~~~~~~~~~~l~~~-Gv~~~~~~-----------~~~iR~~~~~~~t~e~i~~~~~~l~ 438 (470)
.+.. .. ..+...++.+|.++ |+.+.|.+ .+.+|++ +..+++.++.++++|+
T Consensus 341 -adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~--~~k~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 341 -ADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFC--FCKADETLRKAIERLK 414 (420)
T ss_pred -EeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHH--HHhhHHHHHHHHHHHh
Confidence 3332 10 01234567777766 88877653 4677887 6778888888888887
No 135
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=2.6e-26 Score=227.98 Aligned_cols=322 Identities=17% Similarity=0.201 Sum_probs=217.4
Q ss_pred CCC-eEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCC--CeEEecCChhHHHHHHH
Q 012138 73 EGN-KYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGY--DMVLPMNTGAEGVETAL 149 (470)
Q Consensus 73 ~G~-~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~v~~~~sGteA~~~al 149 (470)
.|+ .++++..|... ++ .+|++.+++.+.+..... |......+|.+.++++++. ++|++++|+++++..++
T Consensus 29 ~g~~~~~~l~~~~~~--~~-~~~~~~~a~~~~~~~~~~----Y~~~~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~ 101 (369)
T PRK08153 29 RGRPFRARIGANESG--FG-PSPSVIAAMREAAAEIWK----YGDPENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIV 101 (369)
T ss_pred cCCcceeEecCCCCC--CC-CCHHHHHHHHHHHHHhhc----CCCCccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHH
Confidence 344 35688877433 23 778999999887654322 2222256788888888764 57999999999999988
Q ss_pred HHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecC----CCHHHHHHHHHhcCCCe
Q 012138 150 KLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF----GDITALEKIFKESGDQI 225 (470)
Q Consensus 150 ~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~d~~~Le~~l~~~~~~~ 225 (470)
+++.. +|+ .|++..|+|.+........+.. ...+|+ .|++++++.+.+. ++
T Consensus 102 ~~~~~---------~gd-~vlv~~p~y~~~~~~~~~~g~~-------------~~~vp~~~~~~~~~~l~~~~~~~--~~ 156 (369)
T PRK08153 102 RLYVE---------PGD-PVVTSLGAYPTFNYHVAGFGGR-------------LVTVPYRDDREDLDALLDAARRE--NA 156 (369)
T ss_pred HHhcC---------CCC-EEEECCCcchHHHHHHHHcCCe-------------EEEeeCCCCCCCHHHHHHHhccc--CC
Confidence 87654 455 7888888886654332222211 112222 1677776655432 66
Q ss_pred EEEEE-ccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcc---eeecccccc-CCCc
Q 012138 226 AGFLF-EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD---MVILGKALG-GGVI 300 (470)
Q Consensus 226 ~~vi~-epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pd---i~s~sK~l~-gG~~ 300 (470)
++|++ +| +||||.++ +.+.+++|.++|++ |++||+||+|..|++.|....+.. ..++ +.||||.++ +|+
T Consensus 157 ~~i~l~~P-~NPtG~~~-~~~~l~~l~~~~~~-~~~lI~DE~y~~~~~~~~~~~~~~--~~~~~i~~~SfSK~~g~~Gl- 230 (369)
T PRK08153 157 PLVYLANP-DNPMGSWH-PAADIVAFIEALPE-TTLLVLDEAYCETAPAGAAPPIDT--DDPNVIRMRTFSKAYGLAGA- 230 (369)
T ss_pred cEEEEeCC-CCCCCCCC-CHHHHHHHHHhCCC-CcEEEEeCchhhhcCcccchhhhh--cCCCEEEEecchHhccCcch-
Confidence 77764 65 99999999 88888999888874 999999999998876553322211 1233 349999998 998
Q ss_pred ceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccc
Q 012138 301 PVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG 379 (470)
Q Consensus 301 ~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~-~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g 379 (470)
|+||+++++++++.+.... .+++.++++++++.++|+.-+ .+.+++..+++.+++.+.|++. + +...+..|
T Consensus 231 RiG~~v~~~~~~~~l~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~----g--~~~~p~~~ 302 (369)
T PRK08153 231 RVGYAIGAPGTIKAFDKVR--NHFGMNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARAN----G--LTPLPSAT 302 (369)
T ss_pred heeeeecCHHHHHHHHHhh--cCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC----C--CccCCCcC
Confidence 9999999999998876432 357789999999988885210 0223344444444454444432 1 33334556
Q ss_pred eeEEEEeccCCCchhHHHHHHHHHHcCceec-cC---CCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccC
Q 012138 380 LFNAVEFDKTALPVSAYDICLKMKERGILAK-PT---HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~-~~---~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
.|+++.+..+. ..+..+.++|.++||.+. |+ ..+++|++. .++++++.++++|++++. .++
T Consensus 303 ~f~~~~~~~~~--~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis~---~~~~~~~~~~~al~~~~~-~~~ 367 (369)
T PRK08153 303 NFVAIDCGRDG--AFARAVLDGLIARDIFVRMPGVAPLDRCIRVSC---GPDEELDLFAEALPEALE-AAR 367 (369)
T ss_pred cEEEEECCCCc--ccHHHHHHHHHHCCeEEeeCCCCCCCCeEEEec---CCHHHHHHHHHHHHHHHH-Hhh
Confidence 66666543221 257789999999999995 43 247999993 379999999999999987 654
No 136
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.95 E-value=4.2e-26 Score=229.24 Aligned_cols=342 Identities=15% Similarity=0.173 Sum_probs=218.0
Q ss_pred CCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHc---cccCCCCCCCcHHHHHHHHhhhhC----CC-eEEecCChhHH
Q 012138 73 EGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKL---TLSSRAFYNDKFPVFAERLTSMFG----YD-MVLPMNTGAEG 144 (470)
Q Consensus 73 ~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~----~~-~v~~~~sGteA 144 (470)
.|..++|+..+. +.+..++.+.+++.+.+... .+.......+++..+++++.+.++ .+ +|++|+|+++|
T Consensus 31 ~~~~~~~l~~g~---p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~a 107 (403)
T PRK08636 31 AGEDIIDFSMGN---PDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEG 107 (403)
T ss_pred cCCCEEEcCCcC---CCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHH
Confidence 345678888773 33435666777777665432 121112234567778888776544 35 69999999999
Q ss_pred HHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCC-CCeeeecCCCHH----HHHHHHH
Q 012138 145 VETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLL-PGHLKVDFGDIT----ALEKIFK 219 (470)
Q Consensus 145 ~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~----~Le~~l~ 219 (470)
+..+++++.. +|+ .|++.+|+|.+........+... ... +.. .+...+ |++ .++++++
T Consensus 108 l~~~~~~l~~---------~gd-~Vlv~~P~y~~~~~~~~~~g~~~-~~v---~~~~~~~~~~---d~~~l~~~l~~~~~ 170 (403)
T PRK08636 108 YVHLVQAITN---------PGD-VAIVPDPAYPIHSQAFILAGGNV-HKM---PLEYNEDFEL---DEDQFFENLEKALR 170 (403)
T ss_pred HHHHHHHhCC---------CCC-EEEEcCCCCcchHHHHHhcCCEE-EEE---eccccccCcc---ChhhhhhHHHHHHh
Confidence 9999987764 455 88889999976544433322211 100 000 000112 444 4577776
Q ss_pred hcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCc----cccccC-CCCcceeecccc
Q 012138 220 ESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM----LASDWE-EVRPDMVILGKA 294 (470)
Q Consensus 220 ~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~----~~~~~~-~~~pdi~s~sK~ 294 (470)
++..++++++++.++||||.++ +.+.+++|.++|++|+++||+||+|..|...+.. ...+.. +....+.+|||.
T Consensus 171 ~~~~~~~~i~~~~P~NPTG~~~-s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 249 (403)
T PRK08636 171 ESSPKPKYVVVNFPHNPTTATV-EKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKS 249 (403)
T ss_pred hccCCceEEEEeCCCCCCCccC-CHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccc
Confidence 5445678777554499999999 9999999999999999999999999987544422 111111 111123479999
Q ss_pred cc-CCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCc
Q 012138 295 LG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNY 371 (470)
Q Consensus 295 l~-gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~ 371 (470)
++ +|+ |+||+++++++++.+........++.+.+.+.++..+++...+ +.+++.++++.+.+.+.|++. .
T Consensus 250 ~~~~Gl-RiG~iv~~~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~------~ 322 (403)
T PRK08636 250 YNMAGW-RVGFVVGNKKLVGALKKIKSWLDYGMFTPIQVAATIALDGDQSCVEEIRETYRKRRDVLIESFANA------G 322 (403)
T ss_pred cCCccc-eeeeeeCCHHHHHHHHHHHHHhcccCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC------C
Confidence 96 998 9999999999988876543333345555566655555532111 224444555555555555542 1
Q ss_pred eEEEec-cceeEEEEeccCCCchhHHHHHHHHH-HcCceeccCC------CCEEEEecCCCCCHHHHHHHHHHHHHHHhc
Q 012138 372 VKEVRG-RGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLEL 443 (470)
Q Consensus 372 ~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~ 443 (470)
+....+ .|.++++.++......+..++++.+. ++||.+.|+. .+++||+. ..+++++++++++|.++++
T Consensus 323 ~~~~~p~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~--~~~~~~l~~~~~rl~~~l~- 399 (403)
T PRK08636 323 WELQKPRASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIAL--IENENRIRQAARNIKKFLK- 399 (403)
T ss_pred CcccCCCcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEe--cCCHHHHHHHHHHHHHHHH-
Confidence 333344 45555555543210123577887755 5799998862 57999995 4689999999999999998
Q ss_pred cc
Q 012138 444 DL 445 (470)
Q Consensus 444 ~~ 445 (470)
..
T Consensus 400 ~~ 401 (403)
T PRK08636 400 EL 401 (403)
T ss_pred hh
Confidence 64
No 137
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.95 E-value=2.3e-26 Score=228.29 Aligned_cols=317 Identities=16% Similarity=0.098 Sum_probs=209.9
Q ss_pred CCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhC-----CCeEEecCChhHHHHHH
Q 012138 74 GNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFG-----YDMVLPMNTGAEGVETA 148 (470)
Q Consensus 74 G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-----~~~v~~~~sGteA~~~a 148 (470)
+..++||..+. +....++.+.+++.+..+...+.......++++.+++++.+.++ .++|++|+|+++++..+
T Consensus 26 ~~~~i~l~~~~---p~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~ 102 (364)
T PRK07865 26 PDGIVDLSVGT---PVDPVPPVIQEALAAAADAPGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWL 102 (364)
T ss_pred CCCEEEcCCCC---CCCCCCHHHHHHHHHHHhhCCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHH
Confidence 33567887774 33335688888887665433322222334567778888876543 46899999999999887
Q ss_pred HHHH-HHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEE
Q 012138 149 LKLA-RKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAG 227 (470)
Q Consensus 149 l~~~-~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~ 227 (470)
+.++ .. +|+ .|++..++|.+........+. ..+.++++++++. .++++
T Consensus 103 ~~~l~~~---------~gd-~Vl~~~p~y~~~~~~~~~~g~---------------~~~~~~~~~~l~~------~~~~~ 151 (364)
T PRK07865 103 PTLLGLG---------PGD-VVVIPELAYPTYEVGARLAGA---------------TVVRADSLTELGP------QRPAL 151 (364)
T ss_pred HHHHcCC---------CCC-EEEECCCCcccHHHHHHhcCC---------------EEEecCChhhCCc------ccceE
Confidence 7665 23 455 788889998665433322211 1222234444432 26788
Q ss_pred EEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccc-cccC--CCC----cceeecccccc-CCC
Q 012138 228 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWE--EVR----PDMVILGKALG-GGV 299 (470)
Q Consensus 228 vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~-~~~~--~~~----pdi~s~sK~l~-gG~ 299 (470)
|+++.++||||.++ +.+.+++|.++|++||++||+||+|..+...++... .... +.. .-+.||||.++ +|+
T Consensus 152 v~~~~p~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl 230 (364)
T PRK07865 152 IWLNSPSNPTGRVL-GVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGY 230 (364)
T ss_pred EEEcCCCCCCCccC-CHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCce
Confidence 88766699999999 899999999999999999999999998765553321 1110 101 12348999996 898
Q ss_pred cceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecc
Q 012138 300 IPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGR 378 (470)
Q Consensus 300 ~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~ 378 (470)
|+||+++++++++.+........++.+.+.+.++.++|+..+. +..++.++++.+.+.+.|++. .+....+.
T Consensus 231 -RiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~------g~~~~~~~ 303 (364)
T PRK07865 231 -RAGFVAGDPALVAELLEVRKHAGMMVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAA------GFRVDHSE 303 (364)
T ss_pred -eeEEEecCHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHc------CCcccCCC
Confidence 9999999999988876544444556777888777766643111 234455556666666666553 13333455
Q ss_pred ceeEEEEeccCCCchhHHHHHHHHHHcCceeccCC------CCEEEEecCCCCCHHHHHHHHHHHH
Q 012138 379 GLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALH 438 (470)
Q Consensus 379 g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~ 438 (470)
|.++.| +.... +..++++.|.++||.+.|+. .+++||+.. .+++++++++++|+
T Consensus 304 ~~~~~~-~~~~~---~~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~~~~~~~~l~ 363 (364)
T PRK07865 304 AGLYLW-ATRGE---DCWDTVAWLAERGILVAPGDFYGPAGAQHVRVALT--ATDERIAAAVERLA 363 (364)
T ss_pred ccEEEE-EeCCC---CHHHHHHHHHHCCEEEeCccccCcCCCCEEEEEec--CCHHHHHHHHHHhh
Confidence 655555 22222 45678899999999998752 578999954 57899999999885
No 138
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.95 E-value=2.5e-26 Score=227.20 Aligned_cols=317 Identities=16% Similarity=0.090 Sum_probs=212.7
Q ss_pred CCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhC-----CCeEEecCChhHHHHH
Q 012138 73 EGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFG-----YDMVLPMNTGAEGVET 147 (470)
Q Consensus 73 ~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-----~~~v~~~~sGteA~~~ 147 (470)
++..++|+.++.. ....+|.+.+++.+......+....+..++++++++++.+.++ .++|++|+|+++++..
T Consensus 19 ~~~~~i~l~~~~p---~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~ 95 (357)
T TIGR03539 19 HPDGIVDLSVGTP---VDPVPPLIRAALAAAADAPGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAW 95 (357)
T ss_pred CCCCeEEccCCCC---CCCCCHHHHHHHHHHHhhCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHH
Confidence 3456789988743 3335788888887766543333222344667788888876543 3689999999999998
Q ss_pred HHHHH-HHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeE
Q 012138 148 ALKLA-RKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIA 226 (470)
Q Consensus 148 al~~~-~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~ 226 (470)
++.++ .. +|+ .|++.+++|.+........+. ..+.+++++.++ . .+++
T Consensus 96 ~~~~l~~~---------~gd-~Vl~~~p~y~~~~~~~~~~g~---------------~~~~v~~~~~l~----~--~~~~ 144 (357)
T TIGR03539 96 LPTLLGLG---------PGD-TVVIPELAYPTYEVGALLAGA---------------TPVAADDPTELD----P--VGPD 144 (357)
T ss_pred HHHHHcCC---------CCC-EEEECCCCcHHHHHHHHhcCC---------------EEeccCChhhcC----c--cCcc
Confidence 87765 33 455 788889998765443322211 122223444332 1 2678
Q ss_pred EEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccc-ccc--CC----CCcceeecccccc-CC
Q 012138 227 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDW--EE----VRPDMVILGKALG-GG 298 (470)
Q Consensus 227 ~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~-~~~--~~----~~pdi~s~sK~l~-gG 298 (470)
+|+++.++||+|.++ +.+.+++|.++|++||+++|+||+|.+|.+.+.... ... .+ ...-+.||||.++ +|
T Consensus 145 ~v~~~~p~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G 223 (357)
T TIGR03539 145 LIWLNSPGNPTGRVL-SVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAG 223 (357)
T ss_pred EEEEeCCCCCcCccC-CHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCc
Confidence 888766699999999 899999999999999999999999987765443221 110 00 0112339999985 89
Q ss_pred CcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Q 012138 299 VIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG 377 (470)
Q Consensus 299 ~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~-~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~ 377 (470)
+ |+||+++++++++.+........++.+.+.+.++.++|+... ....++.++++.+++.+.|++.+ +....+
T Consensus 224 ~-R~G~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~g------~~~~~p 296 (357)
T TIGR03539 224 Y-RAGFVAGDPALVAELLTVRKHAGLMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKAG------FRIDHS 296 (357)
T ss_pred e-eEEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHcC------CCCcCC
Confidence 8 999999999998887654444456677888877777664211 12344555566666666665531 223345
Q ss_pred cceeEEEEeccCCCchhHHHHHHHHHHcCceeccCC------CCEEEEecCCCCCHHHHHHHHHHH
Q 012138 378 RGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------DTIVRLTPPLSISSNELQEGSKAL 437 (470)
Q Consensus 378 ~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l 437 (470)
.|.++.|... .. +..++.+.|.++||.+.|+. .+++|+++ ..+++++++++++|
T Consensus 297 ~~~~~~~~~~-~~---~~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~--~~~~~~i~~~~~~l 356 (357)
T TIGR03539 297 EAGLYLWATR-GE---DAWDTVDRLAELGILVAPGDFYGPAGSQHVRVAL--TATDERIAAAVARL 356 (357)
T ss_pred CccEEEEEEC-CC---CHHHHHHHHHhCCEEECCccccCCCCCCeEEEEe--cCCHHHHHHHHHhh
Confidence 6666666322 22 46678899999999998863 57999995 45789999999876
No 139
>PRK07683 aminotransferase A; Validated
Probab=99.95 E-value=4.2e-26 Score=228.00 Aligned_cols=333 Identities=15% Similarity=0.154 Sum_probs=218.0
Q ss_pred CeEEeccCCcccccCCCCCHHHHHHHHHHHHHcccc--CCCCCCCcHHHHHHHHhhhhC----CC-eEEecCChhHHHHH
Q 012138 75 NKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLS--SRAFYNDKFPVFAERLTSMFG----YD-MVLPMNTGAEGVET 147 (470)
Q Consensus 75 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~----~~-~v~~~~sGteA~~~ 147 (470)
..++|+..+.+. ...++.+.+++.+.++..... ......++++++++++.+.+| .+ +|++|+|+++|+..
T Consensus 28 ~~~i~l~~~~p~---~~~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~ 104 (387)
T PRK07683 28 DNLISLTIGQPD---FPTPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDI 104 (387)
T ss_pred CCeEEecCCCCC---CCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence 456788877533 225678899999888753211 122234456666666654433 34 79999999999999
Q ss_pred HHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEE
Q 012138 148 ALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAG 227 (470)
Q Consensus 148 al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~ 227 (470)
+++.+.. +|+ .|++..++|.+........+....+ .+...+...+ |++++++.+.+ ++++
T Consensus 105 ~~~~l~~---------~gd-~Vl~~~p~y~~~~~~~~~~g~~~~~----~~~~~~~~~~---~~~~l~~~~~~---~~~~ 164 (387)
T PRK07683 105 AFRTILE---------PGT-EVILPAPIYPGYEPIIRLCGAKPVF----IDTRSTGFRL---TAEALENAITE---KTRC 164 (387)
T ss_pred HHHHhCC---------CCC-EEEEcCCCccchHHHHHHcCCEEEE----eecCcccCCC---CHHHHHHhcCc---CceE
Confidence 9887654 455 7888899987654443332221111 1111111111 67888888865 6677
Q ss_pred EEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccC-CCC---cceeecccccc-CCCcce
Q 012138 228 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE-EVR---PDMVILGKALG-GGVIPV 302 (470)
Q Consensus 228 vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~-~~~---pdi~s~sK~l~-gG~~~i 302 (470)
+++..++||||.++ +.+.+++|.++|+++|++||+||+|..+...+.......+ +.. .-+.+|||.++ +|+ |+
T Consensus 165 i~i~~p~NPtG~~~-s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGl-Ri 242 (387)
T PRK07683 165 VVLPYPSNPTGVTL-SKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGW-RI 242 (387)
T ss_pred EEEeCCCCCCCcCC-CHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccc-ee
Confidence 77555599999999 9999999999999999999999999976443332211111 111 12349999999 998 99
Q ss_pred eEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccce
Q 012138 303 SAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL 380 (470)
Q Consensus 303 g~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~ 380 (470)
||+++++++++.+.........+.+.+++.++.+.|+.-.. +.++++++++.+.+.+.|.++ .+....+.|.
T Consensus 243 G~i~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~ 316 (387)
T PRK07683 243 GFLFAPSYLAKHILKVHQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISM------GLDVEKPTGA 316 (387)
T ss_pred EEEEcCHHHHHHHHHHHHhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc------CCcccCCCee
Confidence 99999999988876432222234566777777666643111 234555566666676666553 1333356666
Q ss_pred eEEEE-eccCCCchhHHHHHHHH-HHcCceeccCC------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 381 FNAVE-FDKTALPVSAYDICLKM-KERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 381 ~~~~~-~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
+++|. +.... .+..+++..+ .++||.+.|+. ++++||+. ..+++++.+++++|.++++
T Consensus 317 ~~~~~~~~~~~--~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~--~~~~~~~~~al~~l~~~l~ 382 (387)
T PRK07683 317 FYLFPSIGHFT--MSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSY--AYSIETLKEGLDRLEAFLQ 382 (387)
T ss_pred EEEEEecccCC--CCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEe--cCCHHHHHHHHHHHHHHHH
Confidence 66663 22211 2456677664 66799998863 57999995 4689999999999999887
No 140
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.95 E-value=5.3e-26 Score=227.95 Aligned_cols=331 Identities=14% Similarity=0.077 Sum_probs=215.5
Q ss_pred CCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccC-CCCCCCcHHHHHHHHhhhhC------C-CeEEecCChhH
Q 012138 72 PEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSS-RAFYNDKFPVFAERLTSMFG------Y-DMVLPMNTGAE 143 (470)
Q Consensus 72 ~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~------~-~~v~~~~sGte 143 (470)
..|+.++||..|.... ..++.+.+++.+.+.....++ .....++++.+++++.+.++ . ++|++|+|+++
T Consensus 25 ~~~~~~i~l~~~~p~~---~~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~ 101 (393)
T TIGR03538 25 PASKPPIALSIGEPKH---PTPAFVLEALRENLHGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTRE 101 (393)
T ss_pred hcCCCeEEecCCCCCC---CCCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHH
Confidence 4577888998875432 267889999988765432222 12234566777777766532 3 36999999999
Q ss_pred HHHHHHHHHHHhchhcccCCCCCc-EEEEEccCccccccchhcccCCcccccCCCCCCCC-eeeecCCCHHHHHHHHHhc
Q 012138 144 GVETALKLARKWGYVKKKFSIDEA-IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-HLKVDFGDITALEKIFKES 221 (470)
Q Consensus 144 A~~~al~~~~~~~~~~~~~~~g~~-~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~Le~~l~~~ 221 (470)
|+..+++++.. +|+. .|++..|+|.+....+...+.. .. ..+..++ .+.+ |++++++++.+
T Consensus 102 al~~~~~~l~~---------~gd~~~vlv~~P~y~~~~~~~~~~g~~-~~---~v~~~~~~~~~~---d~~~l~~~~~~- 164 (393)
T TIGR03538 102 ALFAFAQAVIN---------PGQAPLVVMPNPFYQIYEGAALLAGAE-PY---FLNCTAENGFLP---DFDAVPESVWR- 164 (393)
T ss_pred HHHHHHHHHcC---------CCCcceEEecCCCCcchHHHHHhcCCe-EE---EeeccccCCCCC---CHHHHHHHHhh-
Confidence 99999998765 5664 5888889986654332222211 11 0111111 1112 78899888865
Q ss_pred CCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccC--Cccc----cccCCC--Cc---ceee
Q 012138 222 GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG--RMLA----SDWEEV--RP---DMVI 290 (470)
Q Consensus 222 ~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G--~~~~----~~~~~~--~p---di~s 290 (470)
++++|++..++||||.++ +.+.+++|.++|++||++||+||+|..+.+.+ .... ....+. .+ -+.|
T Consensus 165 --~~k~i~l~~p~NPtG~~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S 241 (393)
T TIGR03538 165 --RCQLLFVCSPGNPTGAVL-SLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHS 241 (393)
T ss_pred --cceEEEEeCCCCCcCccc-CHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEec
Confidence 677777544599999999 99999999999999999999999999765443 1111 111111 11 2349
Q ss_pred cccccc-CCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHhhC
Q 012138 291 LGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQF 368 (470)
Q Consensus 291 ~sK~l~-gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~-~~~~~~~~~~~~~~l~~~L~~l~~~~ 368 (470)
|||.++ +|+ |+||+++++++++.+.......+++.+.+.+.++.+++..-+ -...++.++++.+.+.+.|++.
T Consensus 242 ~SK~~~~~Gl-RvG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~---- 316 (393)
T TIGR03538 242 LSKRSNLPGL-RSGFVAGDAEILKAFLRYRTYHGCAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQV---- 316 (393)
T ss_pred chhhcCCccc-ceEEEecCHHHHHHHHHHHHhhccCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhh----
Confidence 999865 898 999999999998877644333345567777777766663210 0223444555555555555542
Q ss_pred CCceEEEec-cceeEEEEeccCCCchhHHHHHHHHH-HcCceeccCC------------CCEEEEecCCCCCHHHHHHHH
Q 012138 369 PNYVKEVRG-RGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH------------DTIVRLTPPLSISSNELQEGS 434 (470)
Q Consensus 369 p~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------------~~~iR~~~~~~~t~e~i~~~~ 434 (470)
+....+ .|.|+++.+. . +..++++.|. ++||.+.|+. .+++||+ +..+++++++++
T Consensus 317 ---~~~~~p~gg~f~~~~~~--~---~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris--~~~~~~~l~~~l 386 (393)
T TIGR03538 317 ---LDLELPDAGFYLWPKVP--G---DDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIA--LVAPLEECVEAA 386 (393)
T ss_pred ---CcccCCCeeEEEEEECC--C---CHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEE--ecCCHHHHHHHH
Confidence 111234 4555555543 2 4567888886 5699997653 3689999 456899999999
Q ss_pred HHHHHH
Q 012138 435 KALHDV 440 (470)
Q Consensus 435 ~~l~~~ 440 (470)
++|.++
T Consensus 387 ~~l~~~ 392 (393)
T TIGR03538 387 ERIRSF 392 (393)
T ss_pred HHHHHh
Confidence 999875
No 141
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.95 E-value=2.4e-26 Score=230.98 Aligned_cols=339 Identities=13% Similarity=0.098 Sum_probs=222.3
Q ss_pred CCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccc--cCCCCCCCcHHHHHHHHhhhhC----CCeEEecCChhHHHHH
Q 012138 74 GNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTL--SSRAFYNDKFPVFAERLTSMFG----YDMVLPMNTGAEGVET 147 (470)
Q Consensus 74 G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~----~~~v~~~~sGteA~~~ 147 (470)
|..++|+..+.+..+ .+|.+.+++.+.++.... .......++++++++++.+.+| .++|++|+|+++|+..
T Consensus 32 ~~~~i~l~~g~p~~~---~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~ 108 (402)
T PRK06107 32 GRSIVDLTVGEPDFD---TPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFL 108 (402)
T ss_pred cCCEEEcCCCCCCCC---CCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHH
Confidence 445678887754332 578899999988864321 1222334667788888877654 3579999999999999
Q ss_pred HHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCC-CeeeecCCCHHHHHHHHHhcCCCeE
Q 012138 148 ALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLP-GHLKVDFGDITALEKIFKESGDQIA 226 (470)
Q Consensus 148 al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~Le~~l~~~~~~~~ 226 (470)
++..+.. +|+ .|++.+++|.+.........+.. .. .+... +...+ |++++++++.. +++
T Consensus 109 ~~~~~~~---------~gd-~vl~~~p~y~~y~~~~~~~~~~~-~~---v~~~~~~~~~~---~~~~l~~~~~~---~~~ 168 (402)
T PRK06107 109 ALMATLE---------AGD-EVIIPAPYWVSYPDMVLANDGTP-VI---VACPEEQGFKL---TPEALEAAITP---RTR 168 (402)
T ss_pred HHHHhcC---------CCC-EEEEecCCCcCHHHHHHHcCCEE-EE---ecCCcccCCCC---CHHHHHhhcCc---Cce
Confidence 9876543 455 78888888765533222222111 10 11110 11112 68899988864 667
Q ss_pred EEEEccccCCCccccCChhhHHHHHHHHHhc-CcEEEEeccccCCcccCCcc-cccc--CCCCcc---eeecccccc-CC
Q 012138 227 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY-NILMIADEIQSGLARSGRML-ASDW--EEVRPD---MVILGKALG-GG 298 (470)
Q Consensus 227 ~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~-gillI~Dev~~g~g~~G~~~-~~~~--~~~~pd---i~s~sK~l~-gG 298 (470)
++++..++||||.++ +.+.+++|+++|++| |+++|+||+|..+.+.+..+ .+.. .+.... +.+|||.++ +|
T Consensus 169 ~v~l~~p~NPtG~~~-s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG 247 (402)
T PRK06107 169 WLILNAPSNPTGAVY-SRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTG 247 (402)
T ss_pred EEEEECCCCCCCcCc-CHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcc
Confidence 666544499999999 999999999999998 99999999999765444221 1111 111112 348899998 89
Q ss_pred CcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEe
Q 012138 299 VIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR 376 (470)
Q Consensus 299 ~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~ 376 (470)
+ |+||+++++++++.+........++.+.++++++...|+.-.. +...+.++++.+.+.+.|+++ + .+....
T Consensus 248 l-RiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~----~-g~~~~~ 321 (402)
T PRK06107 248 W-RIGYAAGPADLIAAINKLQSQSSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAI----P-GLSCLV 321 (402)
T ss_pred c-ceeeeecCHHHHHHHHHHHHhcccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcC----C-CCcccC
Confidence 8 9999999999999887655545667788888888777742111 223444555555555555442 2 344445
Q ss_pred ccceeEEE-Eecc------CCC--chhHHHHHHHH-HHcCceeccCC----CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 377 GRGLFNAV-EFDK------TAL--PVSAYDICLKM-KERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 377 ~~g~~~~~-~~~~------~~~--~~~~~~~~~~l-~~~Gv~~~~~~----~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
+.|.++.| .+.. +.. ..+..++++.| .++||.+.|+. .+++|++. ..++|++++++++|.+.++
T Consensus 322 p~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~--~~~~e~l~~~l~~l~~~l~ 399 (402)
T PRK06107 322 PDGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSI--ATSLETLEEACARIERAVA 399 (402)
T ss_pred CCcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEe--CCCHHHHHHHHHHHHHHHH
Confidence 66666655 3321 000 01456677665 46699998873 57999994 4689999999999999998
Q ss_pred ccc
Q 012138 443 LDL 445 (470)
Q Consensus 443 ~~~ 445 (470)
++
T Consensus 400 -~~ 401 (402)
T PRK06107 400 -AL 401 (402)
T ss_pred -hc
Confidence 65
No 142
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=1.4e-26 Score=229.52 Aligned_cols=318 Identities=17% Similarity=0.126 Sum_probs=212.9
Q ss_pred eEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHHHHH
Q 012138 76 KYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLAR 153 (470)
Q Consensus 76 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~~~~ 153 (470)
.++||.++... +| .+|.+.+++.+.++...+++ .....++.+.++++++ .+++++|+|+++++..+++.+.
T Consensus 30 ~~i~l~~n~~~--~~-~~~~v~~a~~~~~~~~~~~p----~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~ 102 (359)
T PRK03158 30 KIVKLASNENP--YG-PSPKVKEAIAAHLDELALYP----DGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRALL 102 (359)
T ss_pred ceEEecCCCCC--CC-CCHHHHHHHHHHHHHhhcCC----CCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHHh
Confidence 67899887543 44 58899999998887644332 2335677777777775 4679999999999998887665
Q ss_pred HhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccc
Q 012138 154 KWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPI 233 (470)
Q Consensus 154 ~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi 233 (470)
+ +|+ .|++..|+|++.......... .... .+.. ... .|++++++.+++ ++++++++.+
T Consensus 103 ~---------~gd-~v~~~~p~y~~~~~~~~~~g~-~~~~---~~~~--~~~---~d~~~l~~~~~~---~~~~v~i~~p 160 (359)
T PRK03158 103 N---------PGT-NTVMAEPTFSQYRHNAIIEGA-EVRE---VPLK--DGG---HDLEAMLKAIDE---QTKIVWICNP 160 (359)
T ss_pred C---------CCC-EEEEcCCCHHHHHHHHHHcCC-eEEE---EecC--CCC---cCHHHHHHhcCC---CCCEEEEeCC
Confidence 4 454 788899999775433322221 1110 0110 011 178888887754 6777774445
Q ss_pred cCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCc-cc---cccCCCCcceeecccccc-CCCcceeEEEec
Q 012138 234 QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LA---SDWEEVRPDMVILGKALG-GGVIPVSAVLAD 308 (470)
Q Consensus 234 ~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~-~~---~~~~~~~pdi~s~sK~l~-gG~~~ig~v~~~ 308 (470)
+||||.++ +.+.+.++.+.|+ +|+++|+||+|..|...+.. .. .+..+...-+.||||.++ +|+ |+||++++
T Consensus 161 ~NPtG~~~-~~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~Gl-RiG~~v~~ 237 (359)
T PRK03158 161 NNPTGTYV-NHEELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAAL-RVGYGIAS 237 (359)
T ss_pred CCCCCCCC-CHHHHHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcch-hhehhcCC
Confidence 99999999 6666666666664 69999999999876433311 11 111221112349999998 898 99999999
Q ss_pred HHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEec
Q 012138 309 KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 387 (470)
Q Consensus 309 ~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~-~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~ 387 (470)
+++++.+.... .+++.+.+++.++.++|+.-. .+...+..++..+.+.+.|++. .+...++.|.|+++.+.
T Consensus 238 ~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~g~~i~~~~~ 309 (359)
T PRK03158 238 EELIEKLNIAR--PPFNTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEY------GLFYYPSQTNFIFVDTG 309 (359)
T ss_pred HHHHHHHHHhc--CCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC------CCeeCCCcCcEEEEECC
Confidence 99998886533 357789999999888875211 0223333344444444444432 13344567777776553
Q ss_pred cCCCchhHHHHHHHHHHcCceeccC----CCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 012138 388 KTALPVSAYDICLKMKERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVL 441 (470)
Q Consensus 388 ~~~~~~~~~~~~~~l~~~Gv~~~~~----~~~~iR~~~~~~~t~e~i~~~~~~l~~~l 441 (470)
. +..++++.|.++||.+.|+ .++++||+ ..+.+++++++++|++++
T Consensus 310 --~---~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~---~~~~~~~~~l~~al~~~~ 359 (359)
T PRK03158 310 --R---DANELFEALLKKGYIVRSGAALGFPTGVRIT---IGLKEQNDKIIELLKELL 359 (359)
T ss_pred --C---CHHHHHHHHHHCCeEEeeCCCCCCCCeEEEe---cCCHHHHHHHHHHHHHhC
Confidence 2 5678999999999999986 36899999 348999999999998763
No 143
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.95 E-value=2.1e-26 Score=238.01 Aligned_cols=339 Identities=13% Similarity=0.108 Sum_probs=217.5
Q ss_pred CCCCeEEeccCCcccccCC-CCCHHHHHHHHHHHHHccccCC-CCCCCcHHHHHHHHhhhh----CCCeEEecCChhHHH
Q 012138 72 PEGNKYLDFLSAYSAVNQG-HCHPKIMKALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMF----GYDMVLPMNTGAEGV 145 (470)
Q Consensus 72 ~~G~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~----~~~~v~~~~sGteA~ 145 (470)
..|+.+++|..|... +++ ..++++.+++.+.+.....++. ....++++.+++++.+.. ..++|++|+|+++++
T Consensus 143 ~~g~~~i~l~~G~p~-~~~~~~p~~~~~~~~~~~~~~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal 221 (517)
T PRK13355 143 AAGTHILKLNIGNPA-PFGFRTPDEVVYDMAQQLTDTEGYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELI 221 (517)
T ss_pred HcCCCeEEecCcCCC-cCCCCCCHHHHHHHHHHhhcCCCCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHH
Confidence 357789999987442 233 2578899998888764322221 123345566666654432 246899999999999
Q ss_pred HHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCC-eeeecCCCHHHHHHHHHhcCCC
Q 012138 146 ETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-HLKVDFGDITALEKIFKESGDQ 224 (470)
Q Consensus 146 ~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~Le~~l~~~~~~ 224 (470)
..+++++.. +|+ .|++..|+|......+...++.... .+..++ .+.+ |+++|+++++. +
T Consensus 222 ~~~~~~l~~---------~Gd-~Vli~~P~y~~y~~~~~~~g~~~v~----~~~~~~~~~~~---d~~~l~~~~~~---~ 281 (517)
T PRK13355 222 NLSMSALLD---------DGD-EVLIPSPDYPLWTACVNLAGGTAVH----YRCDEQSEWYP---DIDDIRSKITS---R 281 (517)
T ss_pred HHHHHHhCC---------CCC-EEEEcCCCCcCHHHHHHHCCCEEEE----eecCcccCCCC---CHHHHHHhcCc---C
Confidence 999987754 565 7888899997765544333332111 011111 1122 89999998865 6
Q ss_pred eEEEE-EccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcc-ccccCCCCcce-----eecccccc-
Q 012138 225 IAGFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWEEVRPDM-----VILGKALG- 296 (470)
Q Consensus 225 ~~~vi-~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~-~~~~~~~~pdi-----~s~sK~l~- 296 (470)
+++|+ ++| +||||.++ +.+.+++|+++|++||++||+||+|..|.+.+..+ .... ..++. -+|||.++
T Consensus 282 ~k~i~i~nP-~NPTG~v~-~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~--~~~~~~vi~~~S~SK~~~~ 357 (517)
T PRK13355 282 TKAIVIINP-NNPTGALY-PREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIAS--LAPDLFCVTFSGLSKSHMI 357 (517)
T ss_pred ceEEEEECC-CCCCCcCc-CHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHH--hCCCCeEEEEecchhhccC
Confidence 77776 666 99999999 89999999999999999999999999876555321 1111 12332 37899986
Q ss_pred CCCcceeEEEe--cHHH----HhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh-hhHHH---HHHHHHHHHHHHHHHHHh
Q 012138 297 GGVIPVSAVLA--DKEV----MLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAE---RSAHLGEELRQHLFKIQQ 366 (470)
Q Consensus 297 gG~~~ig~v~~--~~~~----~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~-~~~~~---~~~~~~~~l~~~L~~l~~ 366 (470)
+|+ |+||+++ ++++ ++.+... ....++.+.+++.++.++|+.... +.+.+ +..+.++++.+.|++
T Consensus 358 ~G~-RiG~~i~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~--- 432 (517)
T PRK13355 358 AGY-RIGWMILSGNKRIAKDYIEGLNML-ANMRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNA--- 432 (517)
T ss_pred ccc-ceEEEEeeCchhhHHHHHHHHHHH-hcCcCCcChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhc---
Confidence 898 9999984 3443 3333211 122345677788888777742110 11111 222334455555544
Q ss_pred hCCCceEEEeccceeEEE-EeccCCC-chhHHHHH-HHHHHcCceeccC------CCCEEEEecCCCCCHHHHHHHHHHH
Q 012138 367 QFPNYVKEVRGRGLFNAV-EFDKTAL-PVSAYDIC-LKMKERGILAKPT------HDTIVRLTPPLSISSNELQEGSKAL 437 (470)
Q Consensus 367 ~~p~~~~~~~~~g~~~~~-~~~~~~~-~~~~~~~~-~~l~~~Gv~~~~~------~~~~iR~~~~~~~t~e~i~~~~~~l 437 (470)
+| .+....+.|.|+.| .++.... ..+..+++ +.|.++||.+.|+ .++++|++ +..+++++++++++|
T Consensus 433 -~~-g~~~~~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris--~~~~~~~l~~a~~rl 508 (517)
T PRK13355 433 -IP-GISAVKPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVV--YLPRLEDLEDAMDRL 508 (517)
T ss_pred -CC-CcccCCCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEE--eCCCHHHHHHHHHHH
Confidence 32 45566788888877 4432110 01234454 5567779999876 26799999 568999999999999
Q ss_pred HHHHhccc
Q 012138 438 HDVLELDL 445 (470)
Q Consensus 438 ~~~l~~~~ 445 (470)
.+++. ..
T Consensus 509 ~~~~~-~~ 515 (517)
T PRK13355 509 ADFFS-YY 515 (517)
T ss_pred HHHHH-Hh
Confidence 99998 54
No 144
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.95 E-value=4.9e-26 Score=228.15 Aligned_cols=330 Identities=14% Similarity=0.179 Sum_probs=215.3
Q ss_pred CCeEEeccCCcccccCCCCCHHHHHHHHHHHHHcc---ccCCCCCCCcHHHHHHHHhhhhC----CC-eEEecCChhHHH
Q 012138 74 GNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLT---LSSRAFYNDKFPVFAERLTSMFG----YD-MVLPMNTGAEGV 145 (470)
Q Consensus 74 G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~----~~-~v~~~~sGteA~ 145 (470)
|..++||..+ .+.+..++++.+++.+.+.... +.......++++++++++.+.++ .+ .+++|+|+++|+
T Consensus 34 g~~~i~l~~g---~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al 110 (394)
T PRK05942 34 GLDLIDLGMG---NPDGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGL 110 (394)
T ss_pred CCCeEEcCCC---CCCCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHH
Confidence 4557888877 3334456778888777664321 11111223556677777765544 34 488999999999
Q ss_pred HHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCC-eeeecCCCHHHHHHHHHhcCCC
Q 012138 146 ETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-HLKVDFGDITALEKIFKESGDQ 224 (470)
Q Consensus 146 ~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~Le~~l~~~~~~ 224 (470)
..++..+.. +|+ .|++..|+|.+........+.. .. ..+...+ ...+ |++++++.+.+ +
T Consensus 111 ~~~~~~~~~---------~gd-~Vlv~~P~y~~~~~~~~~~g~~-~~---~v~~~~~~~~~~---d~~~l~~~~~~---~ 170 (394)
T PRK05942 111 THLALAYVN---------PGD-VVLVPSPAYPAHFRGPLIAGAQ-IY---PIILKPENDWLI---DLSSIPEEVAQ---Q 170 (394)
T ss_pred HHHHHHhCC---------CCC-EEEEcCCCCcchHHHHHHcCCE-EE---EeecCCccCCcc---CHHHHHHhccc---c
Confidence 999887654 455 7888899987654333222211 10 0111111 1112 78999888865 7
Q ss_pred eEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCc----ccccc-CCCCcceeecccccc-CC
Q 012138 225 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM----LASDW-EEVRPDMVILGKALG-GG 298 (470)
Q Consensus 225 ~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~----~~~~~-~~~~pdi~s~sK~l~-gG 298 (470)
+++|++..++||||.++ +.+.+++|.++|++||+++|+||+|..|...+.. ..... .+....+.+|||.++ +|
T Consensus 171 ~k~i~l~~P~NPtG~~~-s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~G 249 (394)
T PRK05942 171 AKILYFNYPSNPTTATA-PREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAG 249 (394)
T ss_pred ceEEEEcCCCCCCCCcC-CHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChh
Confidence 88888664499999999 9999999999999999999999999976544421 11111 122234569999996 89
Q ss_pred CcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEe
Q 012138 299 VIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR 376 (470)
Q Consensus 299 ~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~ 376 (470)
+ |+||+++++++++.+........++.+.+++.++.++++..++ +..+++++++.+.+.+.|+++ .+....
T Consensus 250 l-RiG~i~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~------~~~~~~ 322 (394)
T PRK05942 250 W-RVGFVVGNRHIIQGLRTLKTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGEL------GWNIPP 322 (394)
T ss_pred h-heeeeecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC------CCeecC
Confidence 8 9999999999999887544434556677777777777764322 345566666666677766553 133345
Q ss_pred ccce-eEEEEeccCCCchhHHHHHHHH-HHcCceeccCC------CCEEEEecCCCCCHHHHHHHHHHHHH
Q 012138 377 GRGL-FNAVEFDKTALPVSAYDICLKM-KERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHD 439 (470)
Q Consensus 377 ~~g~-~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~~ 439 (470)
+.|. |+++.+... .+..+++.++ .++||.+.|+. .+++|++++ .+.+.+.+++++|.+
T Consensus 323 ~~~~~f~~~~~~~~---~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~--~~~~~l~~~l~~l~~ 388 (394)
T PRK05942 323 TKATMYLWVPCPVG---MGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLI--ADCDRLGEALDRLKQ 388 (394)
T ss_pred CCeeeEEEEECCCC---CCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 5566 455544432 2456677655 46799998752 579999964 456667777776654
No 145
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.95 E-value=4.8e-26 Score=228.51 Aligned_cols=339 Identities=17% Similarity=0.175 Sum_probs=221.1
Q ss_pred CCeEEeccCCcccccCCCCCHHHHHHHHHHHHHcccc--CCCCCCCcHHHHHHHHhhhhC----CCeEEecCChhHHHHH
Q 012138 74 GNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLS--SRAFYNDKFPVFAERLTSMFG----YDMVLPMNTGAEGVET 147 (470)
Q Consensus 74 G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~----~~~v~~~~sGteA~~~ 147 (470)
+..++||..+.... ..++++.+++.+.+...... .......++..+++++.+.++ .+++++|+|+++|+..
T Consensus 30 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 106 (393)
T PRK05764 30 GRDVISLGAGEPDF---DTPEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYN 106 (393)
T ss_pred cCCEEEeCCCCCCC---CCCHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHH
Confidence 34577888886543 26789999988887643211 111123345555555544433 3579999999999999
Q ss_pred HHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCC-eeeecCCCHHHHHHHHHhcCCCeE
Q 012138 148 ALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-HLKVDFGDITALEKIFKESGDQIA 226 (470)
Q Consensus 148 al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~Le~~l~~~~~~~~ 226 (470)
++..+.+ +|+ .|++..++|.+....+... +..... .+..++ ...+ |+++++++++. +++
T Consensus 107 ~~~~~~~---------~gd-~vl~~~p~y~~~~~~~~~~-g~~~~~---~~~~~~~~~~~---d~~~l~~~l~~---~~~ 166 (393)
T PRK05764 107 AFMALLD---------PGD-EVIIPAPYWVSYPEMVKLA-GGVPVF---VPTGEENGFKL---TVEQLEAAITP---KTK 166 (393)
T ss_pred HHHHhcC---------CCC-EEEecCCCCcchHHHHHHc-CCEEEE---EecCcccCCcC---CHHHHHHhhCc---cce
Confidence 9887654 454 7888888876543332222 211110 011100 1111 68999988864 667
Q ss_pred EEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCc-ccc-----ccCCCCcceeecccccc-CCC
Q 012138 227 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LAS-----DWEEVRPDMVILGKALG-GGV 299 (470)
Q Consensus 227 ~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~-~~~-----~~~~~~pdi~s~sK~l~-gG~ 299 (470)
+|++..++||+|.++ +.+.+++|.++|++||+++|+||+|..+...+.. ... +..+....+.+|||.++ +|+
T Consensus 167 ~v~~~~p~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~ 245 (393)
T PRK05764 167 ALILNSPSNPTGAVY-SPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGW 245 (393)
T ss_pred EEEEECCCCCCCccc-CHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccc
Confidence 767555599999999 8899999999999999999999999876544422 111 11111122348999999 898
Q ss_pred cceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Q 012138 300 IPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG 377 (470)
Q Consensus 300 ~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~ 377 (470)
|+||+++++++++.+.......+++.+++++.++...|+...+ +.++++++++.+.+.+.|+++ | .+....+
T Consensus 246 -RiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~-g~~~~~~ 319 (393)
T PRK05764 246 -RLGYAAGPKELIKAMSKLQSHSTSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEI----P-GLECPKP 319 (393)
T ss_pred -eeEEEecCHHHHHHHHHHHhhcccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhC----C-CCcccCC
Confidence 9999999999998886544444556788888888777752111 334555555666666666553 2 2333456
Q ss_pred cceeEEE-EeccCCC--chhHHHHHHHHHH-cCceeccCC----CCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 378 RGLFNAV-EFDKTAL--PVSAYDICLKMKE-RGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 378 ~g~~~~~-~~~~~~~--~~~~~~~~~~l~~-~Gv~~~~~~----~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
.|.++.| .+..... +.++.++.+.|.+ +||.+.++. .+++|++ +..+++++++++++|.++++ +.
T Consensus 320 ~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis--~~~~~~~~~~~i~~l~~~~~-~~ 392 (393)
T PRK05764 320 EGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLS--YATSLEDLEEGLERIERFLE-SL 392 (393)
T ss_pred CcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEE--ecCCHHHHHHHHHHHHHHHH-hh
Confidence 6655544 4432110 1135788888765 699998763 4899999 55789999999999999987 54
No 146
>PRK07777 aminotransferase; Validated
Probab=99.95 E-value=3.5e-26 Score=228.79 Aligned_cols=333 Identities=14% Similarity=0.176 Sum_probs=217.1
Q ss_pred eEEeccCCcccccCCCCCHHHHHHHHHHHHHccc-c-CCCCCCCcHHHHHHHHhhhhCC----C-eEEecCChhHHHHHH
Q 012138 76 KYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTL-S-SRAFYNDKFPVFAERLTSMFGY----D-MVLPMNTGAEGVETA 148 (470)
Q Consensus 76 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~-~~~~~~~~~~~l~~~l~~~~~~----~-~v~~~~sGteA~~~a 148 (470)
.++||..+..... .++.+.+++.+.+..... + ......++++.+++++.+.++. + +|++|+|+++|+..+
T Consensus 25 ~~i~l~~g~p~~~---~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~ 101 (387)
T PRK07777 25 GAVNLGQGFPDED---GPPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAA 101 (387)
T ss_pred CeEEccCCCCCCC---CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHH
Confidence 4688888865433 456778877776654211 1 1112334455666666555553 3 699999999999998
Q ss_pred HHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCC--eeeecCCCHHHHHHHHHhcCCCeE
Q 012138 149 LKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG--HLKVDFGDITALEKIFKESGDQIA 226 (470)
Q Consensus 149 l~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~Le~~l~~~~~~~~ 226 (470)
+..+.. +|+ .|++..++|++.......... .... .+..++ ...+ |+++|++++.+ +++
T Consensus 102 ~~~~~~---------~gd-~vli~~p~y~~~~~~~~~~g~-~~~~---~~~~~~~~~~~~---d~~~l~~~~~~---~~~ 161 (387)
T PRK07777 102 VLGLVE---------PGD-EVLLIEPYYDSYAAVIAMAGA-HRVP---VPLVPDGRGFAL---DLDALRAAVTP---RTR 161 (387)
T ss_pred HHHhcC---------CCC-EEEEeCCCchhhHHHHHHCCC-EEEE---eecCCccCCCcC---CHHHHHHhcCc---ccE
Confidence 876543 455 777888888765433222221 1110 111111 1112 78999988865 678
Q ss_pred EEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCc-cccccC-C---CCcceeecccccc-CCCc
Q 012138 227 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDWE-E---VRPDMVILGKALG-GGVI 300 (470)
Q Consensus 227 ~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~-~~~~~~-~---~~pdi~s~sK~l~-gG~~ 300 (470)
+|++++++||||.++ +.+.+++|.++|++||+++|+||+|.++.+.+.. .....+ + ...-+.||||.++ +|+
T Consensus 162 ~v~l~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl- 239 (387)
T PRK07777 162 ALIVNSPHNPTGTVL-TAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGW- 239 (387)
T ss_pred EEEEcCCCCCCCccC-CHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCc-
Confidence 888766799999999 8999999999999999999999999977554431 111111 1 1112448999998 898
Q ss_pred ceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecc
Q 012138 301 PVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGR 378 (470)
Q Consensus 301 ~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~ 378 (470)
|+||+++++++++.+.......+++.+.+.+.++..++...++ +.+++.++++++.+.+.|++++ +....+.
T Consensus 240 RiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~------~~~~~~~ 313 (387)
T PRK07777 240 KIGWACGPAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEAG------FEVHDSA 313 (387)
T ss_pred eeEEEecCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhCC------CCccCCC
Confidence 9999999999988776544444555555555555555542111 3456667777777777776642 2233455
Q ss_pred ceeEEE-EeccCCCchhHHHHHHHHH-HcCceeccCC---------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 379 GLFNAV-EFDKTALPVSAYDICLKMK-ERGILAKPTH---------DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 379 g~~~~~-~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~---------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
|.++.| .++... ..++.++++.|. ++||.+.|+. .+++||+. ..+++++++++++|.++..
T Consensus 314 g~~~~~~~~~~~~-~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~--~~~~~~l~~~l~~l~~~~~ 385 (387)
T PRK07777 314 GTYFLCADPRPLG-YDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAF--CKRDDTLDEAIRRLRALRG 385 (387)
T ss_pred cceEEEecccccC-CCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEe--cCCHHHHHHHHHHHHHHhc
Confidence 666555 443111 125688999997 5699998763 35899995 4589999999999988764
No 147
>PRK08175 aminotransferase; Validated
Probab=99.95 E-value=8e-26 Score=226.69 Aligned_cols=337 Identities=13% Similarity=0.169 Sum_probs=223.4
Q ss_pred CCeEEeccCCcccccCCCCCHHHHHHHHHHHHHcc---ccCCCCCCCcHHHHHHHHhhhhC----CC-eEEecCChhHHH
Q 012138 74 GNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLT---LSSRAFYNDKFPVFAERLTSMFG----YD-MVLPMNTGAEGV 145 (470)
Q Consensus 74 G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~----~~-~v~~~~sGteA~ 145 (470)
|..++|+..+ .+.+..++.+.+++.+.+.... +.......++++.+++++.+.+| .+ ++++|+|+++++
T Consensus 28 ~~~~i~l~~g---~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l 104 (395)
T PRK08175 28 GEDIIDFSMG---NPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGL 104 (395)
T ss_pred CCCeEEcCCC---CCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHH
Confidence 4566788776 3444456778888877764321 11112234556667777665443 24 699999999999
Q ss_pred HHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecC----CCHHHHHHHHHhc
Q 012138 146 ETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF----GDITALEKIFKES 221 (470)
Q Consensus 146 ~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~d~~~Le~~l~~~ 221 (470)
..++..+.. +|+ .|++..|+|..........+.. ...++. .+.+++++++++.
T Consensus 105 ~~~~~~~~~---------~gd-~Vlv~~P~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~~~~l~~~l~~~ 161 (395)
T PRK08175 105 AHLMLATLD---------HGD-TVLVPNPSYPIHIYGAVIAGAQ-------------VRSVPLVEGVDFFNELERAIRES 161 (395)
T ss_pred HHHHHHhCC---------CCC-EEEEcCCCCcchHHHHHHcCCe-------------EEEEecccCCCcHHHHHHHHhhc
Confidence 988876654 565 7888899986544433222211 112221 1478898888764
Q ss_pred CCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcc-cc-cc---CCCCcceeecccccc
Q 012138 222 GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-DW---EEVRPDMVILGKALG 296 (470)
Q Consensus 222 ~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~-~~-~~---~~~~pdi~s~sK~l~ 296 (470)
..++++|+++.++||+|.++ +.+.+++|.++|++||++||+||+|..+...+... .+ .. .+...-+.+|||.++
T Consensus 162 ~~~~~~v~i~~p~NPtG~~~-~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 240 (395)
T PRK08175 162 YPKPKMMILGFPSNPTAQCV-ELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYN 240 (395)
T ss_pred cCCceEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeecccccc
Confidence 44678888665599999999 89999999999999999999999999765444321 11 11 111112358999996
Q ss_pred -CCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceE
Q 012138 297 -GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVK 373 (470)
Q Consensus 297 -gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~ 373 (470)
+|+ |+||+++++++++.+........++.+.+.+.++.+.++..+. +.+++.++++.+.+.+.|+.++ +.
T Consensus 241 ~pGl-RiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~------~~ 313 (395)
T PRK08175 241 MAGW-RIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAG------WM 313 (395)
T ss_pred Ccch-hheeeeCCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHcC------Cc
Confidence 898 9999999999999876543334556666677777666653211 3345556666666777666541 22
Q ss_pred EEec-cceeEEEEeccCCCchhHHHHHHHHH-HcCceeccCC------CCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 374 EVRG-RGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 374 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
...+ .|.|+++.+.......++.+++++|. +.||.+.|+. ++++||+. ..+++.+.+++++|.+++. +.
T Consensus 314 ~~~p~~g~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~--~~~~~~~~~al~~l~~~l~-~~ 390 (395)
T PRK08175 314 VEMPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFAL--IENRDRIRQAIRGIKAMFR-AD 390 (395)
T ss_pred ccCCCEEEEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEe--CCCHHHHHHHHHHHHHHHH-hc
Confidence 2333 56666666654210124678888776 5699998862 46899995 4689999999999999998 65
Q ss_pred CC
Q 012138 446 PK 447 (470)
Q Consensus 446 ~~ 447 (470)
-.
T Consensus 391 ~~ 392 (395)
T PRK08175 391 GL 392 (395)
T ss_pred CC
Confidence 44
No 148
>PRK08363 alanine aminotransferase; Validated
Probab=99.95 E-value=4.6e-26 Score=228.76 Aligned_cols=340 Identities=14% Similarity=0.072 Sum_probs=218.1
Q ss_pred CCCeEEeccCCcccc-cCCCCCHHHHHHHHHHHHHccc-c-CCCCCCCcHHHHHHHHhhhhC----CCeEEecCChhHHH
Q 012138 73 EGNKYLDFLSAYSAV-NQGHCHPKIMKALQEQAEKLTL-S-SRAFYNDKFPVFAERLTSMFG----YDMVLPMNTGAEGV 145 (470)
Q Consensus 73 ~G~~~lD~~~~~~~~-~lG~~~p~v~~a~~~~~~~~~~-~-~~~~~~~~~~~l~~~l~~~~~----~~~v~~~~sGteA~ 145 (470)
+|+.++|+..|.+.. .++ .++.+.+++.+.+..... + +.....++++.+++++...+| .++|++|+|+++|+
T Consensus 28 ~~~~~i~l~~g~p~~~~~~-p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 106 (398)
T PRK08363 28 KGIKVIRLNIGDPVKFDFQ-PPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEAL 106 (398)
T ss_pred cCCCeEEEeCCCCCcCCCC-CCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHH
Confidence 367889999887642 333 678899999888764321 1 112233445555555544333 45799999999999
Q ss_pred HHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCe
Q 012138 146 ETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 225 (470)
Q Consensus 146 ~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~ 225 (470)
..++.++.. +|+ .|++..++|.+........+..... +.+...+...+ |+++|++++++ ++
T Consensus 107 ~~~~~~~~~---------~gd-~Vl~~~p~y~~~~~~~~~~g~~~v~---~~~~~~~~~~~---d~~~l~~~~~~---~~ 167 (398)
T PRK08363 107 QLIFGALLD---------PGD-EILIPGPSYPPYTGLVKFYGGVPVE---YRTIEEEGWQP---DIDDIRKKITE---KT 167 (398)
T ss_pred HHHHHHhCC---------CCC-EEEEcCCCCcchHHHHHHcCCEEEE---eccccccCCcC---CHHHHHhhCCc---ce
Confidence 999987754 455 7888888987654433322221111 00111111112 78888888865 67
Q ss_pred EEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcc---eeecccccc-CCCcc
Q 012138 226 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD---MVILGKALG-GGVIP 301 (470)
Q Consensus 226 ~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pd---i~s~sK~l~-gG~~~ 301 (470)
+++++..++||+|.++ +.+.+++|.++|++||++||+||+|..+...+.........-... +.||||.++ +|+ |
T Consensus 168 ~~v~l~~p~NPtG~~~-~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~Gl-R 245 (398)
T PRK08363 168 KAIAVINPNNPTGALY-EKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGW-R 245 (398)
T ss_pred EEEEEECCCCCCCcCc-CHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccc-e
Confidence 7777545599999999 899999999999999999999999997654443221111111112 349999954 898 9
Q ss_pred eeEEEe--cHHHHhhcCcCC---ccCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEE
Q 012138 302 VSAVLA--DKEVMLCIQPGE---HGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKE 374 (470)
Q Consensus 302 ig~v~~--~~~~~~~~~~~~---~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~ 374 (470)
+||+++ ++++++.+.... ....++.+.+++.++.++|....+ .+++++++++.+.+.+.|+++ | .+..
T Consensus 246 iG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~~----~-~~~~ 320 (398)
T PRK08363 246 LGYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEI----P-GIST 320 (398)
T ss_pred EEEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhcC----C-CCEe
Confidence 999997 666555443211 112356777888877777753111 334555666666666666542 2 3444
Q ss_pred EeccceeEEE-EeccCCCchhHHHHH-HHHHHcCceeccCC------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 375 VRGRGLFNAV-EFDKTALPVSAYDIC-LKMKERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 375 ~~~~g~~~~~-~~~~~~~~~~~~~~~-~~l~~~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
..+.|.|+.| .++... ..+..+++ +.|.++||.+.|+. ++++|++. ..+++++++++++|.++++
T Consensus 321 ~~p~g~~~~~~~l~~~~-~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~--~~~~~~l~~~l~~l~~~~~ 393 (398)
T PRK08363 321 TKPQGAFYIFPRIEEGP-WKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVF--LPPVEILEEAMDRFEEFMR 393 (398)
T ss_pred cCCCeEEEEEEEeccCC-CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEe--cCCHHHHHHHHHHHHHHHH
Confidence 4567777776 444310 01344554 55678899998763 47999994 5789999999999999987
No 149
>PRK08912 hypothetical protein; Provisional
Probab=99.95 E-value=4.2e-26 Score=228.27 Aligned_cols=334 Identities=16% Similarity=0.176 Sum_probs=219.2
Q ss_pred eEEeccCCcccccCCCCCHHHHHHHHHHHHHccc-c-CCCCCCCcHHHHHHHHhhhhC----CC-eEEecCChhHHHHHH
Q 012138 76 KYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTL-S-SRAFYNDKFPVFAERLTSMFG----YD-MVLPMNTGAEGVETA 148 (470)
Q Consensus 76 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~-~~~~~~~~~~~l~~~l~~~~~----~~-~v~~~~sGteA~~~a 148 (470)
..+||..|.+..+ .++.+.+++.+.+..... + +.....++++.+++++.+.+| .+ +|++|+|+++|+..+
T Consensus 27 ~~i~l~~g~p~~~---~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~ 103 (387)
T PRK08912 27 GAINLGQGFPDDP---GPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAA 103 (387)
T ss_pred CeEEccCCCCCCC---CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHH
Confidence 4688888865432 468888888777653211 1 111233456666766665544 34 899999999999888
Q ss_pred HHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEE
Q 012138 149 LKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGF 228 (470)
Q Consensus 149 l~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~v 228 (470)
+..... +|+ .|++..++|..........+.. ... .+..++...+ |+++|++.+.. +++++
T Consensus 104 ~~~~~~---------~gd-~Vlv~~p~y~~~~~~~~~~g~~-~~~---~~~~~~~~~~---~~~~l~~~~~~---~~~~v 163 (387)
T PRK08912 104 LLALVE---------PGD-EVVLFQPLYDAYLPLIRRAGGV-PRL---VRLEPPHWRL---PRAALAAAFSP---RTKAV 163 (387)
T ss_pred HHHhcC---------CCC-EEEEeCCCchhhHHHHHHcCCE-EEE---EecCcccCcC---CHHHHHHHhCc---cceEE
Confidence 886654 455 7888899986554433222211 110 1111111122 78999988865 66777
Q ss_pred EEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcc-c-cccCCC---Ccceeecccccc-CCCcce
Q 012138 229 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-A-SDWEEV---RPDMVILGKALG-GGVIPV 302 (470)
Q Consensus 229 i~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~-~-~~~~~~---~pdi~s~sK~l~-gG~~~i 302 (470)
++..++||||.++ +.+.+++|.++|++||+++|+||+|..+...+..+ . .+..+. ..-+.||||.++ +|+ |+
T Consensus 164 ~l~~p~NPtG~~~-s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl-Ri 241 (387)
T PRK08912 164 LLNNPLNPAGKVF-PREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGW-KV 241 (387)
T ss_pred EEeCCCCCcCccc-CHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCc-ee
Confidence 7555599999999 89999999999999999999999998765444211 1 111121 112348999999 998 99
Q ss_pred eEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccce
Q 012138 303 SAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL 380 (470)
Q Consensus 303 g~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~ 380 (470)
||+++++++++.+........++.++..+.++.+++....+ ++++++++++.+.+.+.|+..+ +....+.|.
T Consensus 242 G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g------~~~~~~~g~ 315 (387)
T PRK08912 242 GFVCAAPPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRIG------FPVLPSQGT 315 (387)
T ss_pred EEEecCHHHHHHHHHHHhhccccCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC------CcccCCCcc
Confidence 99999999998876544444566666666666666642111 3455666677777777766541 333345565
Q ss_pred eEEE-EeccCCCchhHHHHHHHHH-HcCceeccCC--------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 381 FNAV-EFDKTALPVSAYDICLKMK-ERGILAKPTH--------DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 381 ~~~~-~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~--------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
++.| .+.......+..++++.|. ++||.+.|+. .+++|++. ..+++++++++++|.++++
T Consensus 316 ~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~--~~~~~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 316 YFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCF--AKRDATLDEAVERLAAARR 385 (387)
T ss_pred eEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEE--eCCHHHHHHHHHHHHHHHh
Confidence 5554 4432110125778999886 4699988752 47999995 4578999999999999886
No 150
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.95 E-value=8.8e-26 Score=227.89 Aligned_cols=343 Identities=15% Similarity=0.134 Sum_probs=214.7
Q ss_pred CCeEEeccCCcccc-cCCCCCHHHHHHHHHHHHHccc---cCCCCCCCcHHHHHHHHhhhhC----CCeEEecCChhHHH
Q 012138 74 GNKYLDFLSAYSAV-NQGHCHPKIMKALQEQAEKLTL---SSRAFYNDKFPVFAERLTSMFG----YDMVLPMNTGAEGV 145 (470)
Q Consensus 74 G~~~lD~~~~~~~~-~lG~~~p~v~~a~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~~~----~~~v~~~~sGteA~ 145 (470)
|+.+|++..|-+.. +....++++.+++.+.++.... .......++++.+++++....+ .++|++|+|+++|+
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al 130 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAI 130 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHH
Confidence 77899998874321 1233578899999988875322 1112233455566666654332 36799999999999
Q ss_pred HHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCC-CeeeecCCCHHHHHHHHHhcCCC
Q 012138 146 ETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLP-GHLKVDFGDITALEKIFKESGDQ 224 (470)
Q Consensus 146 ~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~Le~~l~~~~~~ 224 (470)
..+++.+.. +|+ .|++..|+|................ .++.+ +.+.+ |+++|++++++ +
T Consensus 131 ~l~~~~l~~---------~Gd-~Vlv~~P~y~~y~~~~~~~g~~~~~----~~~~~~~~~~~---d~~~l~~~~~~---~ 190 (430)
T PLN00145 131 EIIMSVLAQ---------PGA-NILLPRPGYPLYEARAVFSGLEVRH----FDLLPERGWEV---DLEGVEALADE---N 190 (430)
T ss_pred HHHHHHhcC---------CCC-EEEEcCCCCccHHHHHHHcCCEEEE----eeCCcccCCcC---CHHHHHHHhCc---C
Confidence 999987754 455 7888899987654333222221111 11111 11222 89999988876 5
Q ss_pred eEEEE-EccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcc-ccccCCC---Ccceeecccccc-CC
Q 012138 225 IAGFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWEEV---RPDMVILGKALG-GG 298 (470)
Q Consensus 225 ~~~vi-~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~-~~~~~~~---~pdi~s~sK~l~-gG 298 (470)
+++++ ++| +||||.++ +.+.+++|.++|++||++||+||+|..|.+.+..+ ....++- ..-+-+|||.++ +|
T Consensus 191 ~~~i~i~~P-~NPtG~v~-~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG 268 (430)
T PLN00145 191 TVAMVIINP-NNPCGSVY-SYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPG 268 (430)
T ss_pred ceEEEEeCC-CCCCCCCC-CHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCC
Confidence 66666 555 99999999 99999999999999999999999999875544321 1111111 112348999955 89
Q ss_pred CcceeEEEe--cHHHHh------hcCcCCccCCCCCCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhh
Q 012138 299 VIPVSAVLA--DKEVML------CIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQ 367 (470)
Q Consensus 299 ~~~ig~v~~--~~~~~~------~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~ 367 (470)
+ |+||+++ ++.+++ .+.... ....+.+.+.++++..+|+.-.+ ++.++.++++++.+.+.|+++
T Consensus 269 ~-RlG~iv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~--- 343 (430)
T PLN00145 269 W-RLGWIATCDPNGILKETKVVDSIRNYL-NISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEI--- 343 (430)
T ss_pred e-eEEEEEEecchhhhhhhHHHHHHHHHh-cccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcC---
Confidence 9 9999996 333322 222211 11223567777777777753111 223444455555555555442
Q ss_pred CCCceEE-EeccceeEEE-EeccCCC-c-hhHHHHHHHHH-HcCceeccCC----CCEEEEecCCCCCHHHHHHHHHHHH
Q 012138 368 FPNYVKE-VRGRGLFNAV-EFDKTAL-P-VSAYDICLKMK-ERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALH 438 (470)
Q Consensus 368 ~p~~~~~-~~~~g~~~~~-~~~~~~~-~-~~~~~~~~~l~-~~Gv~~~~~~----~~~iR~~~~~~~t~e~i~~~~~~l~ 438 (470)
| .+.. ..+.|.++.| .++.... . .+..+++.+|. ++||++.|+. .+++||++ ..+++++++++++|.
T Consensus 344 -~-g~~~~~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~--~~~~~~l~~al~rl~ 419 (430)
T PLN00145 344 -K-CITCPHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITF--AIDPPSLEDGLERLK 419 (430)
T ss_pred -C-CCCCCcCCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEe--CCCHHHHHHHHHHHH
Confidence 2 3332 3466665555 3332100 0 13556776655 5599998863 68999995 468999999999999
Q ss_pred HHHhcccCCC
Q 012138 439 DVLELDLPKM 448 (470)
Q Consensus 439 ~~l~~~~~~~ 448 (470)
+++. +.++.
T Consensus 420 ~~~~-~~~~~ 428 (430)
T PLN00145 420 SFCL-RHAKL 428 (430)
T ss_pred HHHH-Hhccc
Confidence 9998 76543
No 151
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.95 E-value=6.4e-26 Score=226.83 Aligned_cols=334 Identities=13% Similarity=0.178 Sum_probs=220.7
Q ss_pred EEeccCCcccccCCCCCHHHHHHHHHHHHHccc---cCCCCCCCcHHHHHHHHhhhhC-----CCeEEecCChhHHHHHH
Q 012138 77 YLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTL---SSRAFYNDKFPVFAERLTSMFG-----YDMVLPMNTGAEGVETA 148 (470)
Q Consensus 77 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~~~-----~~~v~~~~sGteA~~~a 148 (470)
++|+..|..... .++.+.+++.+.+..... .......+++..+++++++.+| .+.+++|+|+++++..+
T Consensus 29 ~~~l~~g~~~~~---~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~ 105 (389)
T PRK05957 29 TISLGQGVVSYP---PPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNA 105 (389)
T ss_pred eEEccCCCCCCC---CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHH
Confidence 567777754422 678899999887754321 1112234567788888887765 34699999999999888
Q ss_pred HHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEE
Q 012138 149 LKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGF 228 (470)
Q Consensus 149 l~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~v 228 (470)
+..+.. +|+ .|++.+|+|..........+... . +.+.. +...+ |+++|++.+++ ++++|
T Consensus 106 ~~~~~~---------~gd-~Vlv~~P~y~~~~~~~~~~g~~~-~---~v~~~-~~~~~---d~~~l~~~i~~---~~klv 164 (389)
T PRK05957 106 ILAITD---------PGD-EIILNTPYYFNHEMAITMAGCQP-I---LVPTD-DNYQL---QPEAIEQAITP---KTRAI 164 (389)
T ss_pred HHHhcC---------CCC-EEEEeCCCCcCHHHHHHhcCCEE-E---EeecC-CCCCc---CHHHHHHhcCc---CceEE
Confidence 876643 455 77778888754433222211111 0 11111 01122 78999998865 67887
Q ss_pred EEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCc-ccc-ccCCC---Ccceeecccccc-CCCcce
Q 012138 229 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LAS-DWEEV---RPDMVILGKALG-GGVIPV 302 (470)
Q Consensus 229 i~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~-~~~-~~~~~---~pdi~s~sK~l~-gG~~~i 302 (470)
++..++||||.++ +.+.+++|.++|++||++||+||+|.+|.+.+.. ... ...+. ...+.+|||.++ +|+ |+
T Consensus 165 ~~~~p~NPtG~~~-~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl-Ri 242 (389)
T PRK05957 165 VTISPNNPTGVVY-PEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASW-RI 242 (389)
T ss_pred EEeCCCCCCCcCc-CHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccc-ee
Confidence 7555699999999 8999999999999999999999999977554321 111 11111 123458999997 898 99
Q ss_pred eEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccce
Q 012138 303 SAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR--DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL 380 (470)
Q Consensus 303 g~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~--~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~ 380 (470)
||+++++++++.+.........+.+.+++.++..+|+.-. -++..++++++++.+.+.|+++ +..+....+.|.
T Consensus 243 G~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~~~~~~~~~gg 318 (389)
T PRK05957 243 GYMVIPIHLLEAIKKIQDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQL----QDRCTLHPANGA 318 (389)
T ss_pred EEEecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhc----CCCccccCCCee
Confidence 9999999999988754433344556677777766664211 0223445556666666666543 211232345544
Q ss_pred e-EEEEeccCCCchhHHHHHHHHH-HcCceeccCC------CCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 381 F-NAVEFDKTALPVSAYDICLKMK-ERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 381 ~-~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
+ +++.+... .++.+++++|. ++||.+.|+. ++++|++... .+++++++++++|.+.++ ++
T Consensus 319 ~~~~~~~~~~---~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~~l~~~~~~l~~~~~-~~ 386 (389)
T PRK05957 319 FYCFLKVNTD---LNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGA-LQKATAKEGIERLVQGLK-TI 386 (389)
T ss_pred EEEEEeCCCC---CChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEec-CCHHHHHHHHHHHHHHHH-hh
Confidence 4 44544332 36788999987 4799999863 4689999543 578999999999999988 54
No 152
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.95 E-value=5.4e-26 Score=222.19 Aligned_cols=299 Identities=12% Similarity=0.031 Sum_probs=209.3
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCC--CeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEE
Q 012138 92 CHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGY--DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAII 169 (470)
Q Consensus 92 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~i 169 (470)
.||++.++..+.++.++ .+.+++.++++++++++|. +.+++++||++||..++..+.. +|+.++
T Consensus 34 ~~~~~~~~~~~~~~~~~-----g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~---------~gd~Vl 99 (346)
T TIGR03576 34 GGFKIDEEDLELLETYV-----GPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEP---------PGRKVV 99 (346)
T ss_pred CChhHHHHHHHHHHHhc-----CCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCC---------CCCEEE
Confidence 78999999999998874 3457889999999999987 8999999999999999987764 566444
Q ss_pred EE-E-ccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhH
Q 012138 170 VS-C-CGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYL 247 (470)
Q Consensus 170 i~-~-~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l 247 (470)
+. . .++ |.+......+.+.. .+.++++++++. . .++++|++++ .+++|.++ +.+.+
T Consensus 100 i~~~d~p~-~~s~~~~~~l~ga~--------------~~~~~~l~~l~~-~----~~~~lIiitg-~s~~G~v~-~~~~L 157 (346)
T TIGR03576 100 HYLPEKPA-HPSIPRSCKLAGAE--------------YFESDELSELKK-I----DGTSLVVITG-STMDLKVV-SEEDL 157 (346)
T ss_pred ECCCCCCC-chhHHHHHHHcCCE--------------EeccCCHHHHhh-C----cCceEEEEEC-CCCCCccc-CHHHH
Confidence 32 2 344 55554444444321 223346666432 1 2577888888 78999998 78889
Q ss_pred HHHHHHHHhcCcEEEEeccccCC--cccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcCCccCCCC
Q 012138 248 KAVRDLCSKYNILMIADEIQSGL--ARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG 325 (470)
Q Consensus 248 ~~l~~l~~~~gillI~Dev~~g~--g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~ 325 (470)
++|.++|++||++||+||+|..+ +..|... ...++...-+.||||+++ |+ ++|++++++++++.+........++
T Consensus 158 ~~i~~la~~~~~~livDEAy~~~~~~~~~~~~-~~~~~~divv~s~SKala-G~-r~G~v~~~~~li~~l~~~~~~~~~s 234 (346)
T TIGR03576 158 KRVIKQAKSKEAIVLVDDASGARVRRLYGQPP-ALDLGADLVVTSTDKLMD-GP-RGGLLAGRKELVDKIKSVGEQFGLE 234 (346)
T ss_pred HHHHHHHHHcCCEEEEECCccccccccCCCCC-HHHcCCcEEEeccchhcc-cc-ceEEEEeCHHHHHHHHHhhcCcccC
Confidence 99999999999999999999832 2123221 122332222348899764 45 8999999999999988665555666
Q ss_pred CCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHc
Q 012138 326 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 405 (470)
Q Consensus 326 ~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~ 405 (470)
.+++.++++.++|+.+..+.+++.++++.+.+.+.+.++ . +. +..+.|+++.+.... +...+.+.|.++
T Consensus 235 ~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~~----~--~~--~~~~~f~~~~~~~~~---~~~~~~~ll~~~ 303 (346)
T TIGR03576 235 AQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDKL----N--VE--RTPTGFVIKGVEEEK---LIEIGLDLLRNY 303 (346)
T ss_pred ccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhC----C--CC--cCCCeEEEEeCCCCC---HHHHHHHHHHhC
Confidence 788899999999987554556677777777776666542 1 11 223446666553211 234455566677
Q ss_pred CceeccCC-----CCEEEEecCCCCCHH---HHHHHHHHHHHHHh
Q 012138 406 GILAKPTH-----DTIVRLTPPLSISSN---ELQEGSKALHDVLE 442 (470)
Q Consensus 406 Gv~~~~~~-----~~~iR~~~~~~~t~e---~i~~~~~~l~~~l~ 442 (470)
||++.|+. ++++||+ +..+++ +++.++++|++.++
T Consensus 304 gV~v~~~~~f~~~~~~vRis--~~~~~~~~~~~~~~~~al~~~~~ 346 (346)
T TIGR03576 304 GIITITAVGMPGASKTLRFD--LAAKDAERIGDDYLVEAVKDSLK 346 (346)
T ss_pred CEEEeCCcccCCCCCeEEEE--EecChHHhcCHHHHHHHHHhccC
Confidence 99998853 6799999 445554 79999999988763
No 153
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=4.6e-26 Score=226.48 Aligned_cols=324 Identities=19% Similarity=0.207 Sum_probs=218.8
Q ss_pred CCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCC--CeEEecCChhHHHHHHHH
Q 012138 73 EGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGY--DMVLPMNTGAEGVETALK 150 (470)
Q Consensus 73 ~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~v~~~~sGteA~~~al~ 150 (470)
++++++||.++... +| .+|.+.+++.+.+..... |......++++.++++++. ++|++|+|+++++..++.
T Consensus 30 ~~~~~i~l~~~~~~--~~-~~~~~~~a~~~~~~~~~~----y~~~~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~ 102 (367)
T PRK02731 30 GIADIIKLASNENP--LG-PSPKAIEAIRAAADELHR----YPDGSGFELKAALAEKFGVDPERIILGNGSDEILELLAR 102 (367)
T ss_pred CCCceEEecCCCCC--CC-CCHHHHHHHHHHHHhhcC----CCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHH
Confidence 56789999988533 44 578899999888765432 2222346788888888764 579999999999888777
Q ss_pred HHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEE
Q 012138 151 LARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLF 230 (470)
Q Consensus 151 ~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~ 230 (470)
.+.+ +|+ .|++..++|..........+. .... .+. +...+ |++++++.+++ ++++|++
T Consensus 103 ~l~~---------~gd-~vl~~~p~y~~~~~~~~~~g~-~~~~---~~~--~~~~~---~~~~l~~~~~~---~~~~v~l 160 (367)
T PRK02731 103 AYLG---------PGD-EVIYSEHGFAVYPIAAQAVGA-KPVE---VPA--KDYGH---DLDAMLAAVTP---RTRLVFI 160 (367)
T ss_pred HhcC---------CCC-EEEEecCCHHHHHHHHHHcCC-eEEE---ecc--cCCCC---CHHHHHHHhCC---CCcEEEE
Confidence 6643 454 788888888654433222211 1110 010 01112 78999988864 6777776
Q ss_pred ccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCC-ccccccCCCCccee---ecccccc-CCCcceeEE
Q 012138 231 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLASDWEEVRPDMV---ILGKALG-GGVIPVSAV 305 (470)
Q Consensus 231 epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~-~~~~~~~~~~pdi~---s~sK~l~-gG~~~ig~v 305 (470)
+.++||+|.++ +.+.+.++.+.|+ +|+++|+||+|..+.+.+. .......+..++++ ||||.++ +|+ |+||+
T Consensus 161 ~~p~nptG~~~-~~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~-RiG~l 237 (367)
T PRK02731 161 ANPNNPTGTYL-PAEEVERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGL-RVGYG 237 (367)
T ss_pred eCCCCCCCcCC-CHHHHHHHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCccc-ceeee
Confidence 66699999999 6666666666654 5999999999987654332 11122222223443 8999997 898 99999
Q ss_pred EecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEE
Q 012138 306 LADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV 384 (470)
Q Consensus 306 ~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~ 384 (470)
++++++++.+.... .++..+.+++.++.+.++.... +...++.+++.+.+.+.|++.+ +....+.|.++++
T Consensus 238 ~~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g------~~~~~~~g~~~~i 309 (367)
T PRK02731 238 IAPPEIIDALNRVR--QPFNVNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAELG------LEYIPSVGNFILV 309 (367)
T ss_pred eCCHHHHHHHHHcc--CCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC------CccCCCCceEEEE
Confidence 99999998876432 3466778888888777652111 3344455555566666665531 2223456888888
Q ss_pred EeccCCCchhHHHHHHHHHHcCceeccCC----CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 385 EFDKTALPVSAYDICLKMKERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 385 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~----~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
.++... ++.++++.|.++||.+.++. ++++|+++ .+.++++.++++|+++++
T Consensus 310 ~~~~~~---~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~---~~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 310 DFDDGK---DAAEAYQALLKRGVIVRPVAGYGLPNALRITI---GTEEENRRFLAALKEFLA 365 (367)
T ss_pred ECCCCC---CHHHHHHHHHHCCEEEEeCCCCCCCCeEEEec---CCHHHHHHHHHHHHHHHh
Confidence 764332 67889999999999998763 47899994 478999999999999876
No 154
>PRK07550 hypothetical protein; Provisional
Probab=99.95 E-value=1.4e-25 Score=224.36 Aligned_cols=333 Identities=15% Similarity=0.153 Sum_probs=216.3
Q ss_pred CCeEEeccCCcccccCCCCCHHHHHHHHHHHHHcc---ccCCCCCCCcHHHHHHHHhhhhC----CCeEEecCChhHHHH
Q 012138 74 GNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLT---LSSRAFYNDKFPVFAERLTSMFG----YDMVLPMNTGAEGVE 146 (470)
Q Consensus 74 G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~----~~~v~~~~sGteA~~ 146 (470)
|...+||..+..... .++.+.+++.+.+.... +.......++++.+++++.+..| .++|++|+|+++|+.
T Consensus 28 ~~~~i~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~ 104 (386)
T PRK07550 28 DGPLIDLSQAVPGYP---PPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFW 104 (386)
T ss_pred CCCeEEeCCCCCCCC---CCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHH
Confidence 555788888865432 46788888887764311 11111234456667777765544 478999999999999
Q ss_pred HHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCC-CeeeecCCCHHHHHHHHHhcCCCe
Q 012138 147 TALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLP-GHLKVDFGDITALEKIFKESGDQI 225 (470)
Q Consensus 147 ~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~Le~~l~~~~~~~ 225 (470)
.+++++.. +|+ .|++..++|.+........+.. .. +.+..+ +...+ |++++++++++ ++
T Consensus 105 ~~~~~l~~---------~gd-~Vlv~~p~y~~~~~~~~~~g~~-~~---~v~~~~~~~~~~---~~~~l~~~~~~---~~ 164 (386)
T PRK07550 105 AAMVTLAG---------AGD-EVILPLPWYFNHKMWLDMLGIR-PV---YLPCDEGPGLLP---DPAAAEALITP---RT 164 (386)
T ss_pred HHHHHhcC---------CCC-EEEEcCCCCcchHHHHHhcCCE-EE---EEecCCCcCCCC---CHHHHHHHhcc---cC
Confidence 99887754 465 6888889986553322211111 10 011111 01111 78899998876 56
Q ss_pred EEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCC-cc-ccccCCC---Ccceeecccccc-CCC
Q 012138 226 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-ML-ASDWEEV---RPDMVILGKALG-GGV 299 (470)
Q Consensus 226 ~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~-~~-~~~~~~~---~pdi~s~sK~l~-gG~ 299 (470)
++|++..++||+|.++ +.+.+++|.++|++||++||+||+|.+|...+. .. .....+. ...+.+|||.++ +|+
T Consensus 165 ~~v~~~~P~NPtG~~~-~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~ 243 (386)
T PRK07550 165 RAIALVTPNNPTGVVY-PPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGH 243 (386)
T ss_pred cEEEEeCCCCCCCccc-CHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCccc
Confidence 6655434499999999 899999999999999999999999997643221 11 1111111 123459999998 898
Q ss_pred cceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Q 012138 300 IPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG 377 (470)
Q Consensus 300 ~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~ 377 (470)
|+||+++++++++.+.......+.+.+.+++.++...++.+++ +..++.++++.+.+.+.|... + .+. +.+
T Consensus 244 -RiG~i~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~-~~~-~~~ 316 (386)
T PRK07550 244 -RVGAVVASPARIAEIEKFMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARL----P-GWE-LLA 316 (386)
T ss_pred -ceEeeecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhC----C-Cce-eCC
Confidence 9999999999888776544444555677777777777654322 234455566666666666553 1 222 234
Q ss_pred cceeE-EEEeccCCCchhHHHHHHHHH-HcCceeccCC------CCEEEEecCCCCCHHHHHHHHHHHHHH
Q 012138 378 RGLFN-AVEFDKTALPVSAYDICLKMK-ERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDV 440 (470)
Q Consensus 378 ~g~~~-~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~~~ 440 (470)
.|.++ ++.+.... .++.+++++|. ++||.+.|+. .+++||++.. .+++++++++++|.++
T Consensus 317 ~g~~~~~~~~~~~~--~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 317 SGAYFAYVRHPFPD--RPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFAN-ADVAGIGELVERLRAF 384 (386)
T ss_pred CceEEEEecCCCCC--CCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeec-CCHHHHHHHHHHHHhh
Confidence 45444 44443311 36788999875 5699998852 5799999743 5789999999999875
No 155
>PLN02656 tyrosine transaminase
Probab=99.95 E-value=2.9e-25 Score=223.42 Aligned_cols=345 Identities=16% Similarity=0.143 Sum_probs=217.8
Q ss_pred CCCeEEeccCCcccc-cCCCCCHHHHHHHHHHHHHcc---ccCCCCCCCcHHHHHHHHhhhhC----CCeEEecCChhHH
Q 012138 73 EGNKYLDFLSAYSAV-NQGHCHPKIMKALQEQAEKLT---LSSRAFYNDKFPVFAERLTSMFG----YDMVLPMNTGAEG 144 (470)
Q Consensus 73 ~G~~~lD~~~~~~~~-~lG~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~----~~~v~~~~sGteA 144 (470)
.|+.+++|..|.+.. +....++.+.+++.+.+.... +.+.....++++.+++++.+..| .++|++|+|+++|
T Consensus 29 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 108 (409)
T PLN02656 29 NGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQA 108 (409)
T ss_pred cCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHH
Confidence 567888998874431 124467899999988886522 11222233455566666654433 4689999999999
Q ss_pred HHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCC-CeeeecCCCHHHHHHHHHhcCC
Q 012138 145 VETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLP-GHLKVDFGDITALEKIFKESGD 223 (470)
Q Consensus 145 ~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~Le~~l~~~~~ 223 (470)
+..++.++.. +|+ .|++.+++|............... +.+..+ +...+ |++++++++++
T Consensus 109 l~~~~~~l~~---------~gd-~Vlv~~p~y~~~~~~~~~~g~~~~----~i~~~~~~~~~~---d~~~l~~~~~~--- 168 (409)
T PLN02656 109 IDVALSMLAR---------PGA-NILLPRPGFPIYELCAAFRHLEVR----YVDLLPEKGWEV---DLDAVEALADQ--- 168 (409)
T ss_pred HHHHHHHHhC---------CCC-eEEEeCCCCCcHHHHHHHcCCEEE----EEeCCCcCCCCC---CHHHHHHHhcc---
Confidence 9999987754 465 788888888544322222221111 111111 11122 78999988865
Q ss_pred CeEEEE-EccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcc-cc---ccCCCCcceeecccccc-C
Q 012138 224 QIAGFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS---DWEEVRPDMVILGKALG-G 297 (470)
Q Consensus 224 ~~~~vi-~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~-~~---~~~~~~pdi~s~sK~l~-g 297 (470)
++++++ ++| +||||.++ +.+.+++|.++|++||++||+||+|.+|.+.+..+ .. +......-+.+|||.++ +
T Consensus 169 ~~~~v~l~~P-~NPtG~~~-s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~p 246 (409)
T PLN02656 169 NTVALVIINP-GNPCGNVY-SYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVP 246 (409)
T ss_pred CceEEEEECC-CCCCCCCC-CHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCc
Confidence 455555 666 99999999 89999999999999999999999999876555321 11 11111122448999955 8
Q ss_pred CCcceeEEEec--------HHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHh
Q 012138 298 GVIPVSAVLAD--------KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQ 366 (470)
Q Consensus 298 G~~~ig~v~~~--------~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~ 366 (470)
|+ |+||++++ +++++.+..... ...+.+.+++.++.++|+...+ +..++.++++++.+.+.|+++
T Consensus 247 Gl-RiG~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~-- 322 (409)
T PLN02656 247 GW-RLGWFVTTDPSGSFRDPKIVERIKKYFD-ILGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEI-- 322 (409)
T ss_pred ce-eEEEEEEeCcccccccHHHHHHHHHHHh-hhcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhC--
Confidence 98 99999983 577777653222 1234677888888777753111 223444555555565555542
Q ss_pred hCCCceEEEecccee-EEEEeccCCC-c-hhHHHH-HHHHHHcCceeccCC----CCEEEEecCCCCCHHHHHHHHHHHH
Q 012138 367 QFPNYVKEVRGRGLF-NAVEFDKTAL-P-VSAYDI-CLKMKERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALH 438 (470)
Q Consensus 367 ~~p~~~~~~~~~g~~-~~~~~~~~~~-~-~~~~~~-~~~l~~~Gv~~~~~~----~~~iR~~~~~~~t~e~i~~~~~~l~ 438 (470)
+......++.|.+ +++.++.... . .+..++ .+.|.++||.+.|+. .+++|+++. .+++++++++++|+
T Consensus 323 --~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~--~~~e~l~eal~rl~ 398 (409)
T PLN02656 323 --PCITCPHKPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFA--ADPSSLEEALGRIK 398 (409)
T ss_pred --CCCcCCcCCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeC--CCHHHHHHHHHHHH
Confidence 2111123455555 4444431100 0 124344 466677899999873 579999954 58999999999999
Q ss_pred HHHhcccCCC
Q 012138 439 DVLELDLPKM 448 (470)
Q Consensus 439 ~~l~~~~~~~ 448 (470)
+++. .....
T Consensus 399 ~~~~-~~~~~ 407 (409)
T PLN02656 399 SFYL-RHSKT 407 (409)
T ss_pred HHHH-Hhccc
Confidence 9998 65543
No 156
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.95 E-value=2.3e-25 Score=224.42 Aligned_cols=349 Identities=14% Similarity=0.100 Sum_probs=224.4
Q ss_pred CEEEeCCCCeEEeccCCccccc-CCCCCHHHHHHHHHHHHHc--cccC-CCCCCCcHHHHHHHHhhh----------hCC
Q 012138 67 SSIWDPEGNKYLDFLSAYSAVN-QGHCHPKIMKALQEQAEKL--TLSS-RAFYNDKFPVFAERLTSM----------FGY 132 (470)
Q Consensus 67 ~~~~d~~G~~~lD~~~~~~~~~-lG~~~p~v~~a~~~~~~~~--~~~~-~~~~~~~~~~l~~~l~~~----------~~~ 132 (470)
.++.+..|+.++||..|..... .-..++.+.+++.+.++.. ..++ .....++++.+++++.+. ...
T Consensus 25 ~~~~~~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~ 104 (412)
T PTZ00433 25 NAKPSPSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKK 104 (412)
T ss_pred hhccCCCCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCCh
Confidence 3455567888999998865421 1225788999988877642 1111 112344566666666543 234
Q ss_pred CeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCC-eeeecCCCH
Q 012138 133 DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-HLKVDFGDI 211 (470)
Q Consensus 133 ~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~ 211 (470)
++|++|+|+++|+..+++++.. +|+ .|++..|+|................ .+..++ ...+ |+
T Consensus 105 ~~i~it~G~~~al~~~~~~~~~---------~gd-~vlv~~P~y~~~~~~~~~~g~~~~~----i~~~~~~~~~~---d~ 167 (412)
T PTZ00433 105 DNVVLCSGVSHAILMALTALCD---------EGD-NILVPAPGFPHYETVCKAYGIEMRF----YNCRPEKDWEA---DL 167 (412)
T ss_pred hhEEEeCChHHHHHHHHHHhcC---------CCC-EEEEccCCcccHHHHHHHcCCEEEE----EecCccccCcC---CH
Confidence 6899999999999999987754 455 7888899987654433322221100 111110 1122 78
Q ss_pred HHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcc-ccccCC-CCc--c
Q 012138 212 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWEE-VRP--D 287 (470)
Q Consensus 212 ~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~-~~~~~~-~~p--d 287 (470)
++|++++++ ++++|++..++||||.++ +.+.+++|.++|++||++||+||+|.+|.+.+..+ ....+. -.+ -
T Consensus 168 ~~l~~~~~~---~~~~i~~~~p~NPtG~~~-s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~ 243 (412)
T PTZ00433 168 DEIRRLVDD---RTKALIMTNPSNPCGSNF-SRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVI 243 (412)
T ss_pred HHHHHHhcc---CceEEEEeCCCCCCCccc-CHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEE
Confidence 999888865 677777544499999999 89999999999999999999999999875544221 111111 111 2
Q ss_pred eeecccccc-CCCcceeEEEe------cHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHH
Q 012138 288 MVILGKALG-GGVIPVSAVLA------DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEEL 357 (470)
Q Consensus 288 i~s~sK~l~-gG~~~ig~v~~------~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l 357 (470)
+.+|||.++ +|+ |+||+++ .+++++.+.... ...++.+.+++.++.+.+..-.+ ++.++.++++.+.+
T Consensus 244 ~~SfSK~~~~pGl-RlG~~i~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l 321 (412)
T PTZ00433 244 LGGTAKNLVVPGW-RLGWLLLVDPHGNGGDFLDGMKRLG-MLVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVL 321 (412)
T ss_pred EccchhhcCCCCe-eEEEEEEeCCcccHHHHHHHHHHHh-hccCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 338999995 898 9999996 245666654322 22356788888887777653111 23444455555555
Q ss_pred HHHHHHHHhhCCCceEEEecc-ceeEEEEeccCCC--chhHHHHHHHHHH-cCceeccCC----CCEEEEecCCCCCHHH
Q 012138 358 RQHLFKIQQQFPNYVKEVRGR-GLFNAVEFDKTAL--PVSAYDICLKMKE-RGILAKPTH----DTIVRLTPPLSISSNE 429 (470)
Q Consensus 358 ~~~L~~l~~~~p~~~~~~~~~-g~~~~~~~~~~~~--~~~~~~~~~~l~~-~Gv~~~~~~----~~~iR~~~~~~~t~e~ 429 (470)
.+.|++. + .+....+. |.|+++.++.... ..+..++++.|++ +||.+.|+. .+++|+++ ...+++
T Consensus 322 ~~~L~~~----~-~~~~~~p~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~--~~~~e~ 394 (412)
T PTZ00433 322 YNHIGEC----I-GLSPTMPRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTI--SRPVEV 394 (412)
T ss_pred HHHHhcC----C-CCcccCCCeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEe--cCCHHH
Confidence 5555432 1 23334455 4455555543100 0146788999875 699998863 67999995 456899
Q ss_pred HHHHHHHHHHHHhcccC
Q 012138 430 LQEGSKALHDVLELDLP 446 (470)
Q Consensus 430 i~~~~~~l~~~l~~~~~ 446 (470)
+++++++|.++++ ..+
T Consensus 395 l~~al~~l~~~~~-~~~ 410 (412)
T PTZ00433 395 LREAVERIKAFCE-RHK 410 (412)
T ss_pred HHHHHHHHHHHHH-Hhc
Confidence 9999999999998 655
No 157
>PLN02187 rooty/superroot1
Probab=99.95 E-value=1.3e-25 Score=228.13 Aligned_cols=347 Identities=14% Similarity=0.142 Sum_probs=218.1
Q ss_pred CCCeEEeccCCccc-ccCCCCCHHHHHHHHHHHHHccc---cCCCCCCCcHHHHHHHHhhhh----CCCeEEecCChhHH
Q 012138 73 EGNKYLDFLSAYSA-VNQGHCHPKIMKALQEQAEKLTL---SSRAFYNDKFPVFAERLTSMF----GYDMVLPMNTGAEG 144 (470)
Q Consensus 73 ~G~~~lD~~~~~~~-~~lG~~~p~v~~a~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~~----~~~~v~~~~sGteA 144 (470)
+++.+|++..|-.. .+....++++.+++.+.++.... .+.....++++.+++++.+.+ ..++|++|+|+++|
T Consensus 64 ~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~a 143 (462)
T PLN02187 64 VNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQG 143 (462)
T ss_pred CCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHH
Confidence 46788898877322 11133567899999888864321 111112235556666665433 35789999999999
Q ss_pred HHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCC-CeeeecCCCHHHHHHHHHhcCC
Q 012138 145 VETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLP-GHLKVDFGDITALEKIFKESGD 223 (470)
Q Consensus 145 ~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~Le~~l~~~~~ 223 (470)
+..+++.+.. +|+ .|++.+|+|.+........+.. ... .++.+ +.+.+ |+++|++++++
T Consensus 144 l~~~~~~l~~---------pGd-~Vlv~~P~y~~y~~~~~~~g~~-~~~---~~l~~~~~~~~---d~~~l~~~~~~--- 203 (462)
T PLN02187 144 IEIVFESLAR---------PNA-NILLPRPGFPHYDARAAYSGLE-VRK---FDLLPEKEWEI---DLEGIEAIADE--- 203 (462)
T ss_pred HHHHHHHhcC---------CCC-EEEEeCCCCccHHHHHHHcCCE-EEE---EeCccccCCcc---CHHHHHHhcCC---
Confidence 9999997754 565 7888999997754333222221 110 01111 11222 78999988865
Q ss_pred CeEEEE-EccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcc-ccccC-CCCc--ceeecccccc-C
Q 012138 224 QIAGFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWE-EVRP--DMVILGKALG-G 297 (470)
Q Consensus 224 ~~~~vi-~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~-~~~~~-~~~p--di~s~sK~l~-g 297 (470)
++++++ ++| +||||.++ +.+.+++|.++|++||++||+||+|..|.+.+..+ ....+ +..+ -+.+|||.++ +
T Consensus 204 ~~~~v~i~nP-~NPTG~v~-s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~p 281 (462)
T PLN02187 204 NTVAMVVINP-NNPCGNVY-SHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVP 281 (462)
T ss_pred CcEEEEEeCC-CCCCCCcc-CHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCc
Confidence 455444 777 99999999 99999999999999999999999999865544322 11111 1111 2348999966 8
Q ss_pred CCcceeEEEec-H-HH---HhhcCcCCccCCC--CCCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhh
Q 012138 298 GVIPVSAVLAD-K-EV---MLCIQPGEHGSTF--GGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQ 367 (470)
Q Consensus 298 G~~~ig~v~~~-~-~~---~~~~~~~~~~~t~--~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~ 367 (470)
|+ |+||++++ + .+ ++.+........+ +.+.+.++++.++|+.-.+ +..++.++++.+.+.+.|+++
T Consensus 282 Gl-RiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~--- 357 (462)
T PLN02187 282 GW-KIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDI--- 357 (462)
T ss_pred cc-eeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhC---
Confidence 99 99999973 3 22 2333222222222 3477888888877753111 334455556666666666653
Q ss_pred CCCceE-EEecc-ceeEEEEeccCCC-c-hhHHHHHHH-HHHcCceeccCC----CCEEEEecCCCCCHHHHHHHHHHHH
Q 012138 368 FPNYVK-EVRGR-GLFNAVEFDKTAL-P-VSAYDICLK-MKERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALH 438 (470)
Q Consensus 368 ~p~~~~-~~~~~-g~~~~~~~~~~~~-~-~~~~~~~~~-l~~~Gv~~~~~~----~~~iR~~~~~~~t~e~i~~~~~~l~ 438 (470)
| ... ...+. |.|+++.++.... + .+..+++.. +.++||.+.|+. .+++||+ +..+++.+++++++|.
T Consensus 358 -~-~~~~~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis--~~~~~e~l~~al~rL~ 433 (462)
T PLN02187 358 -P-CVVCPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRIT--IGVEAHMLEDALERLK 433 (462)
T ss_pred -C-CCcCCCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEE--eCCCHHHHHHHHHHHH
Confidence 2 222 22344 4666665542100 0 134455554 577799999863 6899999 5567999999999999
Q ss_pred HHHhcccCCCCC
Q 012138 439 DVLELDLPKMRK 450 (470)
Q Consensus 439 ~~l~~~~~~~~~ 450 (470)
++++ ...+...
T Consensus 434 ~~l~-~~~~~~~ 444 (462)
T PLN02187 434 GFCT-RHAKKTE 444 (462)
T ss_pred HHHH-Hhhhccc
Confidence 9998 7665543
No 158
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.95 E-value=2.2e-25 Score=217.07 Aligned_cols=313 Identities=20% Similarity=0.251 Sum_probs=231.0
Q ss_pred eEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhC-C--CeEEecCChhHHHHHHHHHH
Q 012138 76 KYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFG-Y--DMVLPMNTGAEGVETALKLA 152 (470)
Q Consensus 76 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~--~~v~~~~sGteA~~~al~~~ 152 (470)
.++|+.++- +++| .+|++.+++.+.++.+..+ +.+...++.+.++++++ . +.|+.++|.+|.++..++++
T Consensus 23 ~~i~LssNe--nP~g-p~~~~~~~~~~~~~~~~rY----Pd~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~ 95 (356)
T COG0079 23 GIIKLSSNE--NPYG-PPPKVIEAIRAALDKLNRY----PDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAF 95 (356)
T ss_pred cceeecCCC--CCCC-CCHHHHHHHHHHHHhhccC----CCCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHh
Confidence 578998886 3455 5689999998888755543 34456888888888887 3 57999999999999999988
Q ss_pred HHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecC----CCHHHHHHHHHhcCCCeEEE
Q 012138 153 RKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF----GDITALEKIFKESGDQIAGF 228 (470)
Q Consensus 153 ~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~d~~~Le~~l~~~~~~~~~v 228 (470)
.. +| +.|++..|+|......+...+... ..++. .|++.+.+.+.+ ++++|
T Consensus 96 ~~---------~g-d~vl~~~Ptf~~Y~~~a~~~g~~~-------------~~v~~~~~~~d~~~~~~~~~~---~~~lv 149 (356)
T COG0079 96 VE---------PG-DTVLIPEPTFSMYEIAAQLAGAEV-------------VKVPLKEFRLDLDAILAAIRD---KTKLV 149 (356)
T ss_pred hc---------CC-CEEEEcCCChHHHHHHHHhcCCeE-------------EEecccccccCHHHHHHhhhc---CCCEE
Confidence 76 55 488899999965554444333221 12221 177888877775 56666
Q ss_pred E-EccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCccee---ecccccc-CCCccee
Q 012138 229 L-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV---ILGKALG-GGVIPVS 303 (470)
Q Consensus 229 i-~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~---s~sK~l~-gG~~~ig 303 (470)
+ |+| |||||... +.+.++++.+.+.+ +.+||+||+|..|... .. .....-.++++ ||||++| +|+ |+|
T Consensus 150 ~i~nP-NNPTG~~~-~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~~-~~--~~l~~~~~nlivlRTfSKa~gLAGl-RlG 222 (356)
T COG0079 150 FLCNP-NNPTGTLL-PREELRALLEALPE-GGLVVIDEAYIEFSPE-SS--LELLKYPPNLIVLRTFSKAFGLAGL-RVG 222 (356)
T ss_pred EEeCC-CCCCCCCC-CHHHHHHHHHhCCC-CcEEEEeCchhhcCCc-hh--hhhccCCCCEEEEEecHHhhhcchh-cee
Confidence 6 777 99999999 88889999988888 9999999999998651 11 11111122233 9999999 898 999
Q ss_pred EEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeE
Q 012138 304 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN 382 (470)
Q Consensus 304 ~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~ 382 (470)
++++++++++.+.. ....|+.|.++++++.++|+.-+. +...+++.+.++++.+.|+.++ .....++.+.|+
T Consensus 223 y~ia~~~~i~~l~~--vr~p~~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~-----~~~v~pS~aNFv 295 (356)
T COG0079 223 YAIANPELIAALNK--VRPPFNVSSPALAAAIAALRDADYLEESVERIREERERLYAALKALG-----LFGVFPSQANFV 295 (356)
T ss_pred eccCCHHHHHHHHH--hcCCCCCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCeecCCCCcEE
Confidence 99999999999974 456788899999999988864421 3445556666666666666642 122445668888
Q ss_pred EEEeccCCCchhHHHHHHHHHHcCceeccCC-----CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 383 AVEFDKTALPVSAYDICLKMKERGILAKPTH-----DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-----~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
.+.+.. . . +..+.+.|.++||+++.+. ++++|++ .-|+||.++++++|.+++.
T Consensus 296 lv~~~~-~--~-~~~l~~~L~~~giivR~~~~~~~~~~~lRit---vgt~een~~ll~AL~~~~~ 353 (356)
T COG0079 296 LVRVPD-A--E-AAALAEALLKKGILVRDCSSVGLLPGYLRIT---VGTPEENDRLLAALREVLK 353 (356)
T ss_pred EEECCC-c--c-HHHHHHHHHHCCEEEEeCCCCCCCCCeEEEE---eCCHHHHHHHHHHHHHHHh
Confidence 887654 2 2 6689999999999998663 4699999 5688888999999999887
No 159
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.6e-25 Score=224.39 Aligned_cols=334 Identities=15% Similarity=0.153 Sum_probs=216.2
Q ss_pred CeEEeccCCcccccCCCCCHHHHHHHHHHHHHcc--ccCCCCCCCcHHHHHHHHhhhhC----CCeEEecCChhHHHHHH
Q 012138 75 NKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLT--LSSRAFYNDKFPVFAERLTSMFG----YDMVLPMNTGAEGVETA 148 (470)
Q Consensus 75 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~----~~~v~~~~sGteA~~~a 148 (470)
..++||..+.... + .++.+.+++.+.++... +.+.....++++.+++++.+.+| .+++++|+|+++|+..+
T Consensus 33 ~~~i~l~~~~~~~--~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~ 109 (391)
T PRK08361 33 ENVISLGIGEPDF--D-TPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLA 109 (391)
T ss_pred cCeEEcCCCCCCC--C-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHH
Confidence 3468888775432 2 46888888888776422 11112233445556665554433 46899999999999999
Q ss_pred HHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCC-eeeecCCCHHHHHHHHHhcCCCeEE
Q 012138 149 LKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-HLKVDFGDITALEKIFKESGDQIAG 227 (470)
Q Consensus 149 l~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~Le~~l~~~~~~~~~ 227 (470)
++.+.. +|+ .|++.+++|.+..... ...+...... +..++ ...+ |++++++.+++ ++++
T Consensus 110 ~~~l~~---------~g~-~Vlv~~p~y~~~~~~~-~~~g~~~~~v---~~~~~~~~~~---d~~~l~~~i~~---~~~~ 169 (391)
T PRK08361 110 FESLLE---------EGD-EVIIPDPAFVCYVEDA-KIAEAKPIRI---PLREENEFQP---DPDELLELITK---RTRM 169 (391)
T ss_pred HHHhcC---------CCC-EEEEcCCCCcccHHHH-HHcCCEEEEE---ecCCccCCCC---CHHHHHHhccc---ccEE
Confidence 887654 455 7888888876543322 2222111110 11111 1112 78999998875 6777
Q ss_pred EEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCC-ccccccCCCCcc--eeecccccc-CCCccee
Q 012138 228 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLASDWEEVRPD--MVILGKALG-GGVIPVS 303 (470)
Q Consensus 228 vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~-~~~~~~~~~~pd--i~s~sK~l~-gG~~~ig 303 (470)
++++.++||+|.++ +.+.+++|.++|+++++++|+||+|..|...+. ...........+ +.+|||.++ +|+ |+|
T Consensus 170 v~i~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~Gl-RiG 247 (391)
T PRK08361 170 IVINYPNNPTGATL-DKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGW-RLG 247 (391)
T ss_pred EEEeCCCCCCCcCc-CHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHh-hhh
Confidence 77555599999999 899999999999999999999999997644332 111111111112 348999998 898 999
Q ss_pred EEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh----hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccc
Q 012138 304 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD----EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG 379 (470)
Q Consensus 304 ~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~----~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g 379 (470)
|+++++++++.+.......+++.+.+.+.++..+|+.-.. +..++.++++.+.+.+.|++ +| .+....+.|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~-~~~~~~p~g 322 (391)
T PRK08361 248 FVIAPEQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKE----MP-HIKVFEPKG 322 (391)
T ss_pred hhccCHHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHh----CC-CCeecCCCE
Confidence 9999999988775433333456677777777666643111 22344445555555555544 22 344555666
Q ss_pred eeEEE-EeccCCCchhHHHHHHHHHH-cCceeccCC------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 380 LFNAV-EFDKTALPVSAYDICLKMKE-RGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 380 ~~~~~-~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
.++.| .+.... .+..++++.|.+ +||.+.|+. .+++|++. ..+++++++++++|.++++
T Consensus 323 ~~~~~~~l~~~~--~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~--~~~~~~l~~al~~l~~~l~ 389 (391)
T PRK08361 323 AFYVFANIDETG--MSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISY--ATSKEKLIEAMERMEKALE 389 (391)
T ss_pred EEEEEEECCCCC--CCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEe--cCCHHHHHHHHHHHHHHHh
Confidence 65544 554211 257788888875 699998752 47999994 4688899999999999887
No 160
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.95 E-value=3.6e-25 Score=222.62 Aligned_cols=344 Identities=16% Similarity=0.140 Sum_probs=213.5
Q ss_pred CCCCeEEeccCCcccc-cCCCCCHHHHHHHHHHHHHcc---ccCCCCCCCcHHHHHHHHhhhhC----CCeEEecCChhH
Q 012138 72 PEGNKYLDFLSAYSAV-NQGHCHPKIMKALQEQAEKLT---LSSRAFYNDKFPVFAERLTSMFG----YDMVLPMNTGAE 143 (470)
Q Consensus 72 ~~G~~~lD~~~~~~~~-~lG~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~----~~~v~~~~sGte 143 (470)
.+|+.+|+|..|.... .....+|.+.+++.+.++... +.+.....++++.+++++.+.+| .++|++|+|+++
T Consensus 29 ~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~ 108 (409)
T PLN00143 29 DDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKH 108 (409)
T ss_pred CCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHH
Confidence 4567788888774320 113478889899988887532 21222344567777777765543 467999999999
Q ss_pred HHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCC-CeeeecCCCHHHHHHHHHhcC
Q 012138 144 GVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLP-GHLKVDFGDITALEKIFKESG 222 (470)
Q Consensus 144 A~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~Le~~l~~~~ 222 (470)
++..+++.+.. +|+ .|++..|+|.+.............. .+..+ +.+.+ |+++|+++++.
T Consensus 109 al~~~~~~l~~---------~gd-~v~v~~P~y~~~~~~~~~~g~~~~~----~~~~~~~~~~~---d~~~l~~~~~~-- 169 (409)
T PLN00143 109 AAEIIIKVLAR---------PEA-NILLPRPGFPDVETYAIFHHLEIRH----FDLLPEKGWEV---DLDAVEAIADE-- 169 (409)
T ss_pred HHHHHHHHHcC---------CCC-EEEEcCCCCcCHHHHHHHcCCEEEE----EeccCCCCCcC---CHHHHHHhccc--
Confidence 99999997764 455 8888999997654333322211100 01100 11122 88999988765
Q ss_pred CCeE-EEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcc-ccccCCCC---cceeecccccc-
Q 012138 223 DQIA-GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWEEVR---PDMVILGKALG- 296 (470)
Q Consensus 223 ~~~~-~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~-~~~~~~~~---pdi~s~sK~l~- 296 (470)
+++ +++++| +||||.++ +.+.+++|.++|++||++||+||+|..|.+.+..+ ......-. .-+.||||.++
T Consensus 170 -~~~~~~~~nP-~NPTG~~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~ 246 (409)
T PLN00143 170 -NTIAMVIINP-GNPCGSVY-SYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMI 246 (409)
T ss_pred -CCEEEEEECC-CCCCCCcc-CHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCC
Confidence 444 455777 99999999 99999999999999999999999999876555321 11111111 12349999955
Q ss_pred CCCcceeEEEec-H-HH------HhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHH
Q 012138 297 GGVIPVSAVLAD-K-EV------MLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQ 365 (470)
Q Consensus 297 gG~~~ig~v~~~-~-~~------~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~ 365 (470)
+|+ |+||++++ + .+ ++.+........+ .+.++++++.++|+.-.+ ++..+.+++..+.+.+.|+++
T Consensus 247 pGl-RvG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~- 323 (409)
T PLN00143 247 PGW-GLGWLVTCDPSGLLQICEIADSIKKALNPAPF-PPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEI- 323 (409)
T ss_pred Ccc-ceEEEEeeCchhhhhhHHHHHHHHHHHhccCC-CCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 898 99999983 3 33 2222221122223 366777777666642111 223344444444454544432
Q ss_pred hhCCCceE-EEecc-ceeEEEEeccCC-Cc-hhHHHHHHHH-HHcCceeccCC----CCEEEEecCCCCCHHHHHHHHHH
Q 012138 366 QQFPNYVK-EVRGR-GLFNAVEFDKTA-LP-VSAYDICLKM-KERGILAKPTH----DTIVRLTPPLSISSNELQEGSKA 436 (470)
Q Consensus 366 ~~~p~~~~-~~~~~-g~~~~~~~~~~~-~~-~~~~~~~~~l-~~~Gv~~~~~~----~~~iR~~~~~~~t~e~i~~~~~~ 436 (470)
+ ... ...+. |.|+++.+.... .+ .+..+++..+ .++||.+.|+. .+++||++ ..+++++++++++
T Consensus 324 ---~-~~~~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~--~~~~~~l~~al~r 397 (409)
T PLN00143 324 ---P-CIMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITF--AVEQSSLEDGLGR 397 (409)
T ss_pred ---C-CCCCCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEE--cCCHHHHHHHHHH
Confidence 2 221 12344 445555543210 00 1355666544 67799999864 68999994 5679999999999
Q ss_pred HHHHHhcccCC
Q 012138 437 LHDVLELDLPK 447 (470)
Q Consensus 437 l~~~l~~~~~~ 447 (470)
|.++++ ...+
T Consensus 398 l~~~l~-~~~~ 407 (409)
T PLN00143 398 LKSFCG-RHAK 407 (409)
T ss_pred HHHHHH-Hhcc
Confidence 999997 5543
No 161
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=1.2e-25 Score=222.54 Aligned_cols=319 Identities=16% Similarity=0.198 Sum_probs=207.9
Q ss_pred CCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHH
Q 012138 73 EGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALK 150 (470)
Q Consensus 73 ~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~ 150 (470)
.+..++||..|... ++ .+|++.+++.+.++.... |...-..+|.+.++++++ .++|++|+|+++++..+++
T Consensus 28 ~~~~~i~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~----Y~~~~~~~lr~~ia~~~~~~~~~I~it~G~~~al~~~~~ 100 (357)
T PRK14809 28 DPDDLVKLSSNENP--HG-PSPAAVEAIREAAERVHS----YPKASHADLTAALADRWDVSPEQVWLANGGDGALDYLAR 100 (357)
T ss_pred CccceeEecCCCCC--CC-CCHHHHHHHHHHHhhhhc----CCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH
Confidence 35578899887433 33 678899998887764322 222234567777777764 5689999999999999988
Q ss_pred HHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCC-CeeeecCCCHHHHHHHHHhcCCCeEEEE
Q 012138 151 LARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLP-GHLKVDFGDITALEKIFKESGDQIAGFL 229 (470)
Q Consensus 151 ~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~Le~~l~~~~~~~~~vi 229 (470)
++.. +|+ .|++.+|+|............. ... .++.. +.... +.+++++... ++++|+
T Consensus 101 ~~~~---------~gd-~V~v~~P~y~~~~~~~~~~g~~-~~~---~~l~~~~~~~~---~~~~~~~~~~----~~k~i~ 159 (357)
T PRK14809 101 AMLD---------PGD-TVLVPDPGFAYYGMSARYHHGE-VRE---YPVSKADDFEQ---TADTVLDAYD----GERIVY 159 (357)
T ss_pred HhcC---------CCC-EEEEeCCChHHHHHHHHHcCCe-EEE---EecccCcCCCc---CHHHHHHhhc----CCcEEE
Confidence 7754 465 7888999875332222111111 000 01100 00111 5666655442 456666
Q ss_pred EccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccc-cccCCCCcceeecccccc-CCCcceeEEEe
Q 012138 230 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEEVRPDMVILGKALG-GGVIPVSAVLA 307 (470)
Q Consensus 230 ~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~-~~~~~~~pdi~s~sK~l~-gG~~~ig~v~~ 307 (470)
+..++||||.++ +.+.+++|.++|++ +++||+||+|..|...+.... .+..+....+.||||.++ +|+ |+||+++
T Consensus 160 l~~p~NPTG~~~-s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~Gl-RiG~~~~ 236 (357)
T PRK14809 160 LTSPHNPTGSEI-PLDEVEALAERTDE-ETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGL-RLGYAVV 236 (357)
T ss_pred EeCCCCCCCcCC-CHHHHHHHHHhCcc-CcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcch-hheeeec
Confidence 555599999999 88889999888875 789999999998765433211 121222223459999998 898 9999999
Q ss_pred cHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEe
Q 012138 308 DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 386 (470)
Q Consensus 308 ~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~ 386 (470)
++++++.+... ..+++.+.+++.++.++|+.-.. +..++.++++.+.+.+.|.. . ..++.|.|+++.+
T Consensus 237 ~~~~~~~~~~~--~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~-----~~~~~g~f~~~~~ 305 (357)
T PRK14809 237 PEEWADAYARV--NTPFAASELACRAGLAALDDDEHVERTVETARWAREYIREELDA----P-----TWESAGNFVLAEV 305 (357)
T ss_pred CHHHHHHHHHh--CCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcC----c-----cCCCCCCEEEEEC
Confidence 99999888643 24667788888888777642000 12233333333333333321 1 1246677777765
Q ss_pred ccCCCchhHHHHHHHHHHcCceeccCC----CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 387 DKTALPVSAYDICLKMKERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 387 ~~~~~~~~~~~~~~~l~~~Gv~~~~~~----~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
. +..++++.|.++||.+.++. .+++|+++ .+++++++++++|+++++
T Consensus 306 ~------~~~~~~~~l~~~gv~v~~g~~f~~~~~iRls~---~~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 306 G------DASAVAEAAQERGVIVRDCTSFGLPECIRITC---GTREETERAVEVLNEVLA 356 (357)
T ss_pred C------CHHHHHHHHHHCCEEEEECccCCCCCeEEEec---CCHHHHHHHHHHHHHHhc
Confidence 3 35678899999999998864 57999993 357899999999999875
No 162
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.95 E-value=3.6e-25 Score=226.97 Aligned_cols=325 Identities=14% Similarity=0.129 Sum_probs=208.0
Q ss_pred CHHHHHHHHHHHHHccc-----cCCCCCCCcHHHHHHHHhhhh----CCCeEEecCChhHHHHHHHHHHH-HhchhcccC
Q 012138 93 HPKIMKALQEQAEKLTL-----SSRAFYNDKFPVFAERLTSMF----GYDMVLPMNTGAEGVETALKLAR-KWGYVKKKF 162 (470)
Q Consensus 93 ~p~v~~a~~~~~~~~~~-----~~~~~~~~~~~~l~~~l~~~~----~~~~v~~~~sGteA~~~al~~~~-~~~~~~~~~ 162 (470)
+..+.+++.+.++.... .......++++.+++++.+.. ..++|++|+|+++|+..+++++. .
T Consensus 90 P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~-------- 161 (481)
T PTZ00377 90 PADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGD-------- 161 (481)
T ss_pred CHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccC--------
Confidence 45677777766654321 111123445666777776543 34689999999999999999775 3
Q ss_pred CCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCC-eeeecCCCHHHHHHHHHhc---CCCeEEEE-EccccCCC
Q 012138 163 SIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-HLKVDFGDITALEKIFKES---GDQIAGFL-FEPIQGEA 237 (470)
Q Consensus 163 ~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~Le~~l~~~---~~~~~~vi-~epi~n~~ 237 (470)
+|+ .|++..|+|.+........+..... .+..++ .+.+ |+++|++++++. +.++++++ ++| +|||
T Consensus 162 -~gD-~Vlv~~P~y~~y~~~~~~~g~~~v~----v~~~~~~~~~~---d~~~l~~~l~~~~~~~~~~k~l~l~~P-~NPT 231 (481)
T PTZ00377 162 -PSD-GVMIPIPQYPLYSAAITLLGGKQVP----YYLDEEKGWSL---DQEELEEAYEQAVRNGITPRALVVINP-GNPT 231 (481)
T ss_pred -CCC-EEEECCCCchhHHHHHHHcCCEEEE----EEeccccCCCC---CHHHHHHHHHHHHhcCCCeeEEEEECC-CCCC
Confidence 455 7888999997665444333322111 111111 1122 789999998752 12677665 655 9999
Q ss_pred ccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccC-Ccc-cccc--CCCCc------ce---eeccccc-c-CCCcce
Q 012138 238 GVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG-RML-ASDW--EEVRP------DM---VILGKAL-G-GGVIPV 302 (470)
Q Consensus 238 G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G-~~~-~~~~--~~~~p------di---~s~sK~l-~-gG~~~i 302 (470)
|.++ +.+.+++|+++|++||++||+||+|..+.+.+ ..+ .+.. .+..+ .+ -+|||++ + +|+ |+
T Consensus 232 G~~~-s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~Gl-Ri 309 (481)
T PTZ00377 232 GQVL-TRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGR-RG 309 (481)
T ss_pred CcCC-CHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcC-ce
Confidence 9999 99999999999999999999999999765532 221 1100 01111 13 3899986 5 799 99
Q ss_pred eEEEe---cHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHH-----------hh-hhHHHHHHHHHHHHHHHHHHHHhh
Q 012138 303 SAVLA---DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVI-----------RD-EKLAERSAHLGEELRQHLFKIQQQ 367 (470)
Q Consensus 303 g~v~~---~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~-----------~~-~~~~~~~~~~~~~l~~~L~~l~~~ 367 (470)
||+++ ++++++.+.... ...++.+.+++.++.++++.. +. ..+++.++++.+.+.+.|+++
T Consensus 310 G~~~~~~~p~~li~~l~~~~-~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~--- 385 (481)
T PTZ00377 310 GYFELTNIPPEVREQIYKLA-SINLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKI--- 385 (481)
T ss_pred EEEEEeCCCHHHHHHHHHHh-heecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---
Confidence 99986 888888876533 234467888888888877421 00 112223445555555555442
Q ss_pred CCCceEEEeccceeEEE-EeccCCC--c-------hhHHHHH-HHHHHcCceeccCC-------CCEEEEecCCCCCHHH
Q 012138 368 FPNYVKEVRGRGLFNAV-EFDKTAL--P-------VSAYDIC-LKMKERGILAKPTH-------DTIVRLTPPLSISSNE 429 (470)
Q Consensus 368 ~p~~~~~~~~~g~~~~~-~~~~~~~--~-------~~~~~~~-~~l~~~Gv~~~~~~-------~~~iR~~~~~~~t~e~ 429 (470)
| .+....++|.|+.| .+..+.. . .+...++ ..|.++||.+.|+. .+++|++. ..++++
T Consensus 386 -~-g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~--~~~~e~ 461 (481)
T PTZ00377 386 -E-GVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITI--LPPEEQ 461 (481)
T ss_pred -C-CcEeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEE--CCCHHH
Confidence 2 45666777776666 3321110 0 0123344 44556699998763 35899994 478899
Q ss_pred HHHHHHHHHHHHhcccC
Q 012138 430 LQEGSKALHDVLELDLP 446 (470)
Q Consensus 430 i~~~~~~l~~~l~~~~~ 446 (470)
+++++++|.++++ +..
T Consensus 462 l~~~l~rl~~~~~-~~~ 477 (481)
T PTZ00377 462 IEEMVKKIKEFHE-SFM 477 (481)
T ss_pred HHHHHHHHHHHHH-HHH
Confidence 9999999999987 543
No 163
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.95 E-value=3.7e-25 Score=216.31 Aligned_cols=303 Identities=15% Similarity=0.141 Sum_probs=205.4
Q ss_pred eEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHh
Q 012138 76 KYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKW 155 (470)
Q Consensus 76 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~ 155 (470)
.++|+.+|. +++|...+.+.+ ..+..+ +.. ..+|.+.++++++.++|++|+|+++|+..++.+ .
T Consensus 21 ~~i~l~~ne--~p~~~~~~~~~~---~~~~~y-------p~~-~~~Lr~~ia~~~~~~~I~it~Gs~~al~~~~~~--~- 84 (330)
T PRK05664 21 DWLDLSTGI--APWPWPVPAIPA---DAWARL-------PET-DDGLEAAARAYYGAPQLLPVAGSQAAIQALPRL--R- 84 (330)
T ss_pred HheeecCCc--CCCCCCCcccCH---HHHHhC-------CCC-hHHHHHHHHHHhCCCCEEECcCHHHHHHHHHHc--c-
Confidence 568888886 345544343322 222221 111 268888899999999999999999999877531 1
Q ss_pred chhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeE-EEEEcccc
Q 012138 156 GYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIA-GFLFEPIQ 234 (470)
Q Consensus 156 ~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~-~vi~epi~ 234 (470)
+|+ .|++.+|+|.+....+...+.. +..+ ++++++++++ +++ +++++| +
T Consensus 85 --------~gd-~v~v~~P~y~~~~~~~~~~g~~-------------~~~v---~~~~~~~~~~----~~~~v~l~nP-~ 134 (330)
T PRK05664 85 --------APG-RVGVLSPCYAEHAHAWRRAGHQ-------------VREL---DEAEVEAALD----SLDVLVVVNP-N 134 (330)
T ss_pred --------CCC-EEEEcCCChHHHHHHHHHcCCe-------------EEEe---chhhHhhhhc----CCCEEEEeCC-c
Confidence 455 7889999997665444333221 2344 3556776664 333 466888 9
Q ss_pred CCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecccccc-CCCcceeEEEecHHHHh
Q 012138 235 GEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPVSAVLADKEVML 313 (470)
Q Consensus 235 n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~-gG~~~ig~v~~~~~~~~ 313 (470)
||||.++ +.+.+++|.++|+++|++||+||+|.++............+-..-+.||||+++ +|+ |+||+++++++++
T Consensus 135 NPTG~~~-s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~~gl~Gl-RiG~~v~~~~l~~ 212 (330)
T PRK05664 135 NPTGRRF-DPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKFFGLAGA-RLGFVLAEPALLR 212 (330)
T ss_pred CCCCCcc-CHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeeccccccCCCc-ceEEEEeCHHHHH
Confidence 9999999 899999999999999999999999987643222222211111112449999998 999 9999999999998
Q ss_pred hcCcCCccCCCCCCHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCc
Q 012138 314 CIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP 392 (470)
Q Consensus 314 ~~~~~~~~~t~~~~~~~~aaa~a~l~~~~-~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~ 392 (470)
.+... ..+++.+.+++.++.++|+... .+..++.++++++++.+.|++++ +....+.+.++++.+ +
T Consensus 213 ~~~~~--~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~~------~~~~~~~~~f~~~~~--~--- 279 (330)
T PRK05664 213 ALAEL--LGPWTVSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRHG------LTPAGGCALFQWVRT--E--- 279 (330)
T ss_pred HHHHh--cCCCCCCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHCC------CcccCCcceEEEEec--C---
Confidence 88643 2345667788888887776422 13456666667777777776641 221122224444432 2
Q ss_pred hhHHHHHHHHHHcCceeccC-CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 393 VSAYDICLKMKERGILAKPT-HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 393 ~~~~~~~~~l~~~Gv~~~~~-~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
++.++.+.|.++||.+... ..+++||+. ..++++++++++.|+++.+
T Consensus 280 -~~~~~~~~l~~~gi~v~~f~~~~~iRis~--~~~~~~~~~l~~al~~~~~ 327 (330)
T PRK05664 280 -DAAALHEFLARRGILTRLFEQPASLRFGL--PADEADWARLDQALLAYRK 327 (330)
T ss_pred -CHHHHHHHHHHCCeEEEECCCCCeEEEEC--CCCHHHHHHHHHHHHHHHh
Confidence 4678999999999998754 367999994 3378889999999988776
No 164
>PRK06855 aminotransferase; Validated
Probab=99.94 E-value=4.5e-25 Score=223.29 Aligned_cols=341 Identities=15% Similarity=0.151 Sum_probs=207.5
Q ss_pred CCeEEeccCCcccccCCCCCHHHHHHHHHHHHHc---cccCCCCCCCcHHHHHHHHhhhhC----CCeEEecCChhHHHH
Q 012138 74 GNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKL---TLSSRAFYNDKFPVFAERLTSMFG----YDMVLPMNTGAEGVE 146 (470)
Q Consensus 74 G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~----~~~v~~~~sGteA~~ 146 (470)
|+.++++..|-........++.+.+++.+.+... .+.+.....++++.+++++.+..| .++|++|+|+++|+.
T Consensus 31 g~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al~ 110 (433)
T PRK06855 31 GVKITWENIGDPIAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIA 110 (433)
T ss_pred cccccccccCCCcccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHHH
Confidence 4445566544221101235677888888876542 122222344567778888776543 467999999999998
Q ss_pred HHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcc-cCCcccccCCCCCCC-CeeeecCCCHHHHHHHHHhcCCC
Q 012138 147 TALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISM-SCDNEAIRGFGPLLP-GHLKVDFGDITALEKIFKESGDQ 224 (470)
Q Consensus 147 ~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~d~~~Le~~l~~~~~~ 224 (470)
.++. +.. +|+ .|++.+|+|++........ ...... .+..+ +.+.+ |+++|+++++++ .+
T Consensus 111 ~~~~-l~~---------~Gd-~Vlv~~P~Y~~~~~~~~~~~g~~~v~----v~~~~~~~~~~---d~~~l~~~~~~~-~~ 171 (433)
T PRK06855 111 KIYG-LLR---------REA-RVIGPSPAYSTHSSAEAAHAGYPPVT----YRLDPENNWYP---DLDDLENKVKYN-PS 171 (433)
T ss_pred HHHH-hcC---------CCC-eEEEeCCCCchHHHHHHHhcCCeEEE----EecccccCCCC---CHHHHHHHHhcC-CC
Confidence 8875 332 455 7888999998754321111 111100 01111 11112 899999998742 14
Q ss_pred eEEEE-EccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCc-ccc-ccC-C-CCcceeecccccc-CC
Q 012138 225 IAGFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LAS-DWE-E-VRPDMVILGKALG-GG 298 (470)
Q Consensus 225 ~~~vi-~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~-~~~-~~~-~-~~pdi~s~sK~l~-gG 298 (470)
+++++ ++| +||||.++ +.+.+++|.++|++||++||+||+|..+.+.+.. ... +.. + ...-+.+|||.++ +|
T Consensus 172 ~~~i~l~~P-~NPTG~~~-s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pG 249 (433)
T PRK06855 172 IAGILLINP-DNPTGAVY-PKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPG 249 (433)
T ss_pred ceEEEEECC-CCCCCcCC-CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCc
Confidence 56555 666 99999999 9999999999999999999999999987655532 111 111 1 1123459999997 99
Q ss_pred CcceeEEEec-----H---HHHhhcCcCCccCCCCCCHHHHHHHHHHHHHH--hh--hhHHHHHHHHHHHHHHHHHHHHh
Q 012138 299 VIPVSAVLAD-----K---EVMLCIQPGEHGSTFGGNPLASAVAIASLDVI--RD--EKLAERSAHLGEELRQHLFKIQQ 366 (470)
Q Consensus 299 ~~~ig~v~~~-----~---~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~--~~--~~~~~~~~~~~~~l~~~L~~l~~ 366 (470)
+ |+||++++ + .+++.+..... ...+.+.+.+.++.++++.- ++ ++.++.++++.+.+.+.|++
T Consensus 250 l-RiG~ii~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~--- 324 (433)
T PRK06855 250 S-RCGWIEVYNADKDEVFKKYINSILNAKM-IEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKD--- 324 (433)
T ss_pred c-eEEEEEEeCCchhhHHHHHHHHHHHhhc-cccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhc---
Confidence 9 99999972 2 23333322111 23346677777777666421 11 22333444444445444433
Q ss_pred hCCCceEEEeccceeEEE-EeccCC------Cc------------------hhHHHHHHH-HHHcCceeccCC-----CC
Q 012138 367 QFPNYVKEVRGRGLFNAV-EFDKTA------LP------------------VSAYDICLK-MKERGILAKPTH-----DT 415 (470)
Q Consensus 367 ~~p~~~~~~~~~g~~~~~-~~~~~~------~~------------------~~~~~~~~~-l~~~Gv~~~~~~-----~~ 415 (470)
+| .+...++.|.|+.| .++... .. .+..+++.. +.++||.+.|+. .+
T Consensus 325 -~~-~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~ 402 (433)
T PRK06855 325 -VP-GLKVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELN 402 (433)
T ss_pred -CC-CeeccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCC
Confidence 22 34445676766655 333210 00 024456655 556699998873 34
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHhcc
Q 012138 416 IVRLTPPLSISSNELQEGSKALHDVLELD 444 (470)
Q Consensus 416 ~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 444 (470)
.+||+... .++++|++++++|.++++ +
T Consensus 403 ~~Rls~~~-~~~~~i~~~~~~l~~~~~-~ 429 (433)
T PRK06855 403 GFRVTLLE-RDEEKFEWIYQTLAEKIE-E 429 (433)
T ss_pred ceEEEECC-CcHHHHHHHHHHHHHHHH-H
Confidence 69999543 589999999999999987 5
No 165
>PRK07337 aminotransferase; Validated
Probab=99.94 E-value=3.4e-25 Score=221.74 Aligned_cols=333 Identities=12% Similarity=0.126 Sum_probs=214.7
Q ss_pred CeEEeccCCcccccCCCCCHHHHHHHHHHHHHccc--cCCCCCCCcHHHHHHHHhhhhC----CCeEEecCChhHHHHHH
Q 012138 75 NKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTL--SSRAFYNDKFPVFAERLTSMFG----YDMVLPMNTGAEGVETA 148 (470)
Q Consensus 75 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~----~~~v~~~~sGteA~~~a 148 (470)
..++||..+..... .+|.+.+++.+.+..... .......++++.+++++.+.++ .+++++|+|+++|+..+
T Consensus 30 ~~~i~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~ 106 (388)
T PRK07337 30 RDIIHMGIGEPDFT---APEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLA 106 (388)
T ss_pred CCEEEeCCcCCCCC---CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHH
Confidence 34677777744322 568889998887753211 1111233455666666655444 36799999999999998
Q ss_pred HHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCC-CeeeecCCCHHHHHHHHHhcCCCeEE
Q 012138 149 LKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLP-GHLKVDFGDITALEKIFKESGDQIAG 227 (470)
Q Consensus 149 l~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~Le~~l~~~~~~~~~ 227 (470)
+..+.. +|+ .|++..++|.+............ . ..+... +...+ |++++++.+.+ ++++
T Consensus 107 ~~~l~~---------~gd-~Vlv~~p~y~~~~~~~~~~g~~~-~---~~~~~~~~~~~~---~~~~l~~~~~~---~~~~ 166 (388)
T PRK07337 107 CLALVE---------RGD-EVLMPDPSYPCNRHFVAAAEGRP-V---LVPSGPAERFQL---TAADVEAAWGE---RTRG 166 (388)
T ss_pred HHHhcC---------CCC-EEEEeCCCchhhHHHHHHcCCEE-E---EeecCCccCCcC---CHHHHHhhcCc---cceE
Confidence 887654 455 78888999866533322222111 1 011111 01122 78899888865 6666
Q ss_pred EEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcce---eecccccc-CCCccee
Q 012138 228 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM---VILGKALG-GGVIPVS 303 (470)
Q Consensus 228 vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi---~s~sK~l~-gG~~~ig 303 (470)
|++..++||||.++ +.+.+++|.++|++||+++|+||+|.++...+..... ....+++ .+|||.++ +|+ |+|
T Consensus 167 v~l~~p~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~--~~~~~~vi~~~S~SK~~~~~G~-RiG 242 (388)
T PRK07337 167 VLLASPSNPTGTSI-APDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSA--LSLGDDVITINSFSKYFNMTGW-RLG 242 (388)
T ss_pred EEEECCCCCCCcCc-CHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcCh--hhccCCEEEEEechhhcCCchh-hee
Confidence 66444499999999 8999999999999999999999999987655432111 1122343 38899997 898 999
Q ss_pred EEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHH--Hhh-hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEec-cc
Q 012138 304 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDV--IRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG-RG 379 (470)
Q Consensus 304 ~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~--~~~-~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~-~g 379 (470)
|+++++++++.+.........+.+.+++.++.++++. +.. ...++.++++++.+.+.|++++ ....+.+ .|
T Consensus 243 ~~~~~~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~-----~~~~~~p~~g 317 (388)
T PRK07337 243 WLVVPEALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESLG-----FKVPVMPDGA 317 (388)
T ss_pred eeecCHHHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcC-----CccccCCCee
Confidence 9999999988876543333445677777777666642 111 2344555666666666666531 1111233 45
Q ss_pred eeEEEEeccCC--CchhHHHHHHHH-HHcCceeccCC-------CCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 012138 380 LFNAVEFDKTA--LPVSAYDICLKM-KERGILAKPTH-------DTIVRLTPPLSISSNELQEGSKALHDVL 441 (470)
Q Consensus 380 ~~~~~~~~~~~--~~~~~~~~~~~l-~~~Gv~~~~~~-------~~~iR~~~~~~~t~e~i~~~~~~l~~~l 441 (470)
.|+++.++... ...++.+++++| .++||.+.|+. .+++|++.. .+++++++++++|.+++
T Consensus 318 ~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~--~~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 318 FYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYA--TSMSRLEEAVARLGKLF 387 (388)
T ss_pred EEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEec--CCHHHHHHHHHHHHHHh
Confidence 66666654210 012567788775 46799998752 479999954 57999999999998875
No 166
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.94 E-value=9e-25 Score=219.63 Aligned_cols=338 Identities=13% Similarity=0.140 Sum_probs=212.7
Q ss_pred CCeEEeccCCcccc--cCCCCCHHHHHHHHHHHHHccc---cCCCCCCCcHHHHHHHHhhh---hCCCeEEecCChhHHH
Q 012138 74 GNKYLDFLSAYSAV--NQGHCHPKIMKALQEQAEKLTL---SSRAFYNDKFPVFAERLTSM---FGYDMVLPMNTGAEGV 145 (470)
Q Consensus 74 G~~~lD~~~~~~~~--~lG~~~p~v~~a~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~---~~~~~v~~~~sGteA~ 145 (470)
|+.++++..|.... .++ .++.+.+++.+.+..... .+.....++++.+++++.+. ...++|++|+|+++|+
T Consensus 30 ~~~~i~l~~g~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al 108 (401)
T TIGR01264 30 EKPMIKLSIGDPTVFGNLP-TDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAI 108 (401)
T ss_pred CCCeeecCCCCCCCcCCCC-CCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHH
Confidence 45678888775421 122 568899998887765321 11112223344455554432 1346799999999999
Q ss_pred HHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCC-eeeecCCCHHHHHHHHHhcCCC
Q 012138 146 ETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-HLKVDFGDITALEKIFKESGDQ 224 (470)
Q Consensus 146 ~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~Le~~l~~~~~~ 224 (470)
..++.++.. +|+ .|++..|+|..........+.. .. ..+...+ ...+ |+++|++.+++ +
T Consensus 109 ~~~~~~l~~---------~gd-~v~i~~P~y~~~~~~~~~~g~~-v~---~~~~~~~~~~~~---d~~~l~~~~~~---~ 168 (401)
T TIGR01264 109 EMCIAALAN---------AGQ-NILVPRPGFPLYETLAESMGIE-VK---LYNLLPDKSWEI---DLKQLESLIDE---K 168 (401)
T ss_pred HHHHHHhCC---------CCC-EEEEeCCCChhHHHHHHHcCCE-EE---EeecCCccCCCC---CHHHHHHHhcc---C
Confidence 999987754 455 7888889886543332222211 00 0011110 1122 78999888865 5
Q ss_pred eEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcc-ccccCCCCc-----ceeecccccc-C
Q 012138 225 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWEEVRP-----DMVILGKALG-G 297 (470)
Q Consensus 225 ~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~-~~~~~~~~p-----di~s~sK~l~-g 297 (470)
+++|++..++||||.++ +.+.+++|.++|+++|++||+||+|.+|.+.+..+ ... ...+ -+.||||.++ +
T Consensus 169 ~~~v~~~~p~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~--~~~~~~~vi~~~SfSK~~~~~ 245 (401)
T TIGR01264 169 TAALIVNNPSNPCGSVF-SRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLA--SLSSTVPILSCGGLAKRWLVP 245 (401)
T ss_pred ceEEEEcCCCCCCCCCC-CHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHH--HcCCCCcEEEEccCcccCCCc
Confidence 67777544499999999 89999999999999999999999999876555321 111 1122 2349999855 8
Q ss_pred CCcceeEEEecH------HHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhC
Q 012138 298 GVIPVSAVLADK------EVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQF 368 (470)
Q Consensus 298 G~~~ig~v~~~~------~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~ 368 (470)
|+ |+||+++++ ++++.+.... ...++.+++++.++.+.|+...+ +..++.++++++++.+.|+++
T Consensus 246 Gl-RiG~iv~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~---- 319 (401)
T TIGR01264 246 GW-RLGWIIIHDRRGILRDIRDGLVKLS-QRILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAV---- 319 (401)
T ss_pred cc-eEEEEEecCcchhHHHHHHHHHHHh-hccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhC----
Confidence 98 999999863 3444443211 12455677888887777753111 234445555555566665543
Q ss_pred CCceEEE-eccceeEEEEeccCC--CchhHHHHHHHHH-HcCceeccCC----CCEEEEecCCCCCHHHHHHHHHHHHHH
Q 012138 369 PNYVKEV-RGRGLFNAVEFDKTA--LPVSAYDICLKMK-ERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHDV 440 (470)
Q Consensus 369 p~~~~~~-~~~g~~~~~~~~~~~--~~~~~~~~~~~l~-~~Gv~~~~~~----~~~iR~~~~~~~t~e~i~~~~~~l~~~ 440 (470)
| .+... +..|.|+++.+.... ...+..++++.|. ++||.+.|+. ++++|++. ..+++++++++++|.++
T Consensus 320 ~-~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~--~~~~~~l~~~l~rl~~~ 396 (401)
T TIGR01264 320 P-GLRPVMPSGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVL--TVPVVMMEEACSRIQEF 396 (401)
T ss_pred C-CCcccCCCeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEE--cCCHHHHHHHHHHHHHH
Confidence 2 23323 345666666653210 0124577888876 6799998763 68999994 56789999999999999
Q ss_pred Hhccc
Q 012138 441 LELDL 445 (470)
Q Consensus 441 l~~~~ 445 (470)
++ ++
T Consensus 397 ~~-~~ 400 (401)
T TIGR01264 397 CE-RH 400 (401)
T ss_pred Hh-cc
Confidence 87 54
No 167
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.94 E-value=9.5e-25 Score=219.40 Aligned_cols=336 Identities=15% Similarity=0.176 Sum_probs=211.2
Q ss_pred CeEEeccCCcccccCCCCCHHHHHHHHHHHHHcc-ccCCCCCCCcHHHHHHHHhhh---hCCCeEEecCChhHHHHHHHH
Q 012138 75 NKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLT-LSSRAFYNDKFPVFAERLTSM---FGYDMVLPMNTGAEGVETALK 150 (470)
Q Consensus 75 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~---~~~~~v~~~~sGteA~~~al~ 150 (470)
..++||..+....+ .++.+.+++.+...... +.+.....++++.+++++... ...++|++|+|+++|+..++.
T Consensus 30 ~~~i~l~~~~~~~~---~~~~~~~a~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~ 106 (397)
T PRK07568 30 IKVYHLNIGQPDIK---TPEVFFEAIKNYDEEVLAYSHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMM 106 (397)
T ss_pred CCEEEecCCCCCCC---CCHHHHHHHHHHhcCCcCcCCCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHHH
Confidence 34667777643322 46788888776553221 111112333444555554321 135689999999999999988
Q ss_pred HHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEE
Q 012138 151 LARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLF 230 (470)
Q Consensus 151 ~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~ 230 (470)
.+.. +|+ .|++..++|....... ...+.... ..+...+ ..+...++++|++++++ ++++|++
T Consensus 107 ~l~~---------~gd-~Vl~~~p~y~~~~~~~-~~~g~~~~---~v~~~~~-~g~~~~~~~~l~~~~~~---~~~~v~i 168 (397)
T PRK07568 107 AICD---------PGD-EILVPEPFYANYNGFA-TSAGVKIV---PVTTKIE-EGFHLPSKEEIEKLITP---KTKAILI 168 (397)
T ss_pred HhcC---------CCC-EEEEecCCCccHHHHH-HHcCCEEE---EeecCcc-cCCCCCCHHHHHHhcCc---cceEEEE
Confidence 6643 455 6777778875432211 11111110 0011000 00111156888888865 6777775
Q ss_pred ccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcc-cc-ccCCCCcce---eecccccc-CCCcceeE
Q 012138 231 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-DWEEVRPDM---VILGKALG-GGVIPVSA 304 (470)
Q Consensus 231 epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~-~~-~~~~~~pdi---~s~sK~l~-gG~~~ig~ 304 (470)
..++||+|.++ +.+.+++|.++|+++|+++|+||+|.+|.+.+... .. ...+..+.+ .||||.++ +|+ |+||
T Consensus 169 ~~p~NPtG~~~-~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~-R~G~ 246 (397)
T PRK07568 169 SNPGNPTGVVY-TKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGA-RIGC 246 (397)
T ss_pred ECCCCCCCccC-CHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCc-ceEE
Confidence 44499999999 89999999999999999999999999886655321 11 111222233 39999998 698 9999
Q ss_pred EEe-cHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecccee
Q 012138 305 VLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF 381 (470)
Q Consensus 305 v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~ 381 (470)
+++ ++++++.+..... ..++.+.+.+.++.++|+..++ +.+.+.++++.+.+.+.|+++ + .+....+.|.+
T Consensus 247 ~~~~~~~~~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~-~~~~~~p~g~~ 320 (397)
T PRK07568 247 LISKNKELIAAAMKLCQ-ARLSPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKI----P-GVVCEKPKGAF 320 (397)
T ss_pred EecCCHHHHHHHHHHhh-ccCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcC----C-CceecCCCcce
Confidence 997 4678776543222 2456777888777777753211 334555666666666666542 2 34444566665
Q ss_pred E-EEEeccCCCchhHHHHHHHHHH------cCceeccCC---------CCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 382 N-AVEFDKTALPVSAYDICLKMKE------RGILAKPTH---------DTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 382 ~-~~~~~~~~~~~~~~~~~~~l~~------~Gv~~~~~~---------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
+ ++.++.. +..++++.|.+ +||.+.|+. .+++|+++ ..+++++++++++|.++++ +.
T Consensus 321 ~~~~~l~~~----~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~--~~~~~~~~~~~~~l~~~l~-~~ 393 (397)
T PRK07568 321 YIIAKLPVD----DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAY--VLNEEDLKRAMEILKEALE-KY 393 (397)
T ss_pred EEEEecCCC----CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEE--eCCHHHHHHHHHHHHHHHH-Hh
Confidence 5 4444321 46678888865 599988752 36999994 4678999999999999998 65
Q ss_pred C
Q 012138 446 P 446 (470)
Q Consensus 446 ~ 446 (470)
.
T Consensus 394 ~ 394 (397)
T PRK07568 394 N 394 (397)
T ss_pred h
Confidence 4
No 168
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.94 E-value=2.1e-25 Score=220.05 Aligned_cols=316 Identities=19% Similarity=0.219 Sum_probs=212.1
Q ss_pred CeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHHHH
Q 012138 75 NKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLA 152 (470)
Q Consensus 75 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~~~ 152 (470)
.++|||.++... ++ .+|++++++.+++..... |......++++.++++++ .+++++++|+++++..+++.+
T Consensus 19 ~~~i~l~~~~~~--~~-~~~~~~~a~~~~~~~~~~----y~~~~~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l 91 (346)
T TIGR01141 19 KEVIKLNSNENP--FG-PPPKAKEALRAEADKLHR----YPDPDPAELKQALADYYGVDPEQILLGNGSDEIIELLIRAF 91 (346)
T ss_pred CceEEccCCCCC--CC-CCHHHHHHHHHhHHHhhc----CCCCCHHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHh
Confidence 479999987543 33 679999999988754322 222334778888888876 467999999999998888766
Q ss_pred HHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEcc
Q 012138 153 RKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEP 232 (470)
Q Consensus 153 ~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~ep 232 (470)
.. +|+ .|++..++|.......... +.... ..+...+ .. .|++++++++.. ++++|+++.
T Consensus 92 ~~---------~gd-~v~~~~p~y~~~~~~~~~~-g~~~~---~~~~~~~-~~---~d~~~l~~~~~~---~~~~v~l~~ 150 (346)
T TIGR01141 92 LE---------PGD-AVLVPPPTYSMYEISAKIH-GAEVV---KVPLDED-GQ---LDLEDILVAIDD---KPKLVFLCS 150 (346)
T ss_pred cC---------CCC-EEEEcCCCHHHHHHHHHHc-CCeEE---EeccCCC-CC---CCHHHHHHhcCC---CCCEEEEeC
Confidence 43 454 7888888874332221111 11111 1111111 11 288999887654 678888766
Q ss_pred ccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCccee---ecccccc-CCCcceeEEEec
Q 012138 233 IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV---ILGKALG-GGVIPVSAVLAD 308 (470)
Q Consensus 233 i~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~---s~sK~l~-gG~~~ig~v~~~ 308 (470)
++||+|.++ +.+.++++.+.|+ +|+++|+||+|.++...+... ......++++ ++||.++ +|+ |+|+++++
T Consensus 151 p~NptG~~~-~~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~~~~--~~~~~~~~~i~~~S~sK~~g~~G~-r~G~~~~~ 225 (346)
T TIGR01141 151 PNNPTGNLL-SRSDIEAVLERTP-EDALVVVDEAYGEFSGEPSTL--PLLAEYPNLIVLRTLSKAFGLAGL-RIGYAIAN 225 (346)
T ss_pred CCCCCCCCC-CHHHHHHHHHhCC-CCcEEEEECchhhhcCCccHH--HHHhhCCCEEEEehhhHhhhchhh-hceeeecC
Confidence 699999999 5555665555555 599999999999765432221 1111123433 8899995 788 99999999
Q ss_pred HHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEec
Q 012138 309 KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 387 (470)
Q Consensus 309 ~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~-~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~ 387 (470)
+++++.++... ..++.+++++.++.+.++... -+..+++++++.+++.+.|+++ | .+....+.|.++++.++
T Consensus 226 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~-g~~~~~~~g~~~~~~~~ 298 (346)
T TIGR01141 226 AEIIDALNKVR--APFNLSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKL----P-GLEVYPSDANFVLIRFP 298 (346)
T ss_pred HHHHHHHHhcc--CCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc----C-CCEECCCcCCEEEEecC
Confidence 99998886532 356678888888877775432 1345566666666676666553 2 23333446777777654
Q ss_pred cCCCchhHHHHHHHHHHcCceeccCC-----CCEEEEecCCCCCHHHHHHHHHHHH
Q 012138 388 KTALPVSAYDICLKMKERGILAKPTH-----DTIVRLTPPLSISSNELQEGSKALH 438 (470)
Q Consensus 388 ~~~~~~~~~~~~~~l~~~Gv~~~~~~-----~~~iR~~~~~~~t~e~i~~~~~~l~ 438 (470)
. +++++.++|.++||.+.++. ++++|+++. ++++++++++.|+
T Consensus 299 ~-----~~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 299 R-----DADALFEALLEKGIIVRDLNSYPGLPNCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred C-----CHHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecC---CHHHHHHHHHHhC
Confidence 2 46789999999999998864 589999943 8999999998773
No 169
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.94 E-value=7.4e-25 Score=217.37 Aligned_cols=319 Identities=16% Similarity=0.195 Sum_probs=206.7
Q ss_pred CCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCC--CeEEe-cCChhHHHHHH
Q 012138 72 PEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGY--DMVLP-MNTGAEGVETA 148 (470)
Q Consensus 72 ~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~v~~-~~sGteA~~~a 148 (470)
.+++.++||..+... ++ .+|.+.+++.+.+..... +......++++.++++++. +++++ ++|.++++..+
T Consensus 31 ~~~~~~i~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~----y~~~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~ 103 (361)
T PRK00950 31 IDPESIIKLGSNENP--LG-PSPKAVEAIEKELSKIHR----YPEPDAPELREALSKYTGVPVENIIVGGDGMDEVIDTL 103 (361)
T ss_pred CCccceEEccCCCCC--CC-CCHHHHHHHHHHHHhhcC----CCCCCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHH
Confidence 356688999887432 44 678999998887765332 2233457888888888874 56888 67777888888
Q ss_pred HHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEE
Q 012138 149 LKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGF 228 (470)
Q Consensus 149 l~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~v 228 (470)
++.+.+ +|+ .|++..++|..........+. .... .+. .+...+ |++++++.++. +++++
T Consensus 104 ~~~~~~---------~gd-~vlv~~p~y~~~~~~~~~~g~-~~~~---~~~-~~~~~~---~~~~l~~~~~~---~~~~v 162 (361)
T PRK00950 104 MRTFID---------PGD-EVIIPTPTFSYYEISAKAHGA-KPVY---AKR-EEDFSL---DVDSVLNAITE---KTKVI 162 (361)
T ss_pred HHHhcC---------CCC-EEEEcCCChHHHHHHHHHcCC-EEEE---eec-CCCCCc---CHHHHHHHhcc---CCCEE
Confidence 876643 455 677788887554332222111 1110 010 001122 78999888864 56776
Q ss_pred EEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccc-cccCCCCcceeecccccc-CCCcceeEEE
Q 012138 229 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEEVRPDMVILGKALG-GGVIPVSAVL 306 (470)
Q Consensus 229 i~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~-~~~~~~~pdi~s~sK~l~-gG~~~ig~v~ 306 (470)
+++.++||+|.+++ .+++.++|+++|+++|+||+|.+|. .+.... ....+....+.||||.++ +|+ |+||++
T Consensus 163 ~~~~p~nptG~~~~----~~~l~~l~~~~~~~li~De~y~~~~-~~~~~~~~~~~~~vi~~~S~SK~~g~~Gl-RiG~~~ 236 (361)
T PRK00950 163 FLCTPNNPTGNLIP----EEDIRKILESTDALVFVDEAYVEFA-EYDYTPLALEYDNLIIGRTFSKVFGLAGL-RIGYGF 236 (361)
T ss_pred EEeCCCCCCCCCcC----HHHHHHHHHHCCcEEEEECchhhhC-ccchHHHHHhcCCEEEEEeehHhhcCchh-hcchhc
Confidence 65455999999997 7788889999999999999998774 221111 111111122349999998 898 999999
Q ss_pred ecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEE
Q 012138 307 ADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE 385 (470)
Q Consensus 307 ~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~ 385 (470)
+++++++.+... ...++.++++++++.++++..+. +...++.+++++++.+.|. +....+.|.++++.
T Consensus 237 ~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~---------~~~~~~~~~~i~~~ 305 (361)
T PRK00950 237 VPEWLIDYYMRA--KTPFSLTRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP---------FKVYPSEANFVLVD 305 (361)
T ss_pred CCHHHHHHHHHh--cCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC---------eeECCCcceEEEEE
Confidence 999998877643 33455677787777766642110 1122233333333333222 22223456667766
Q ss_pred eccCCCchhHHHHHHHHHHcCceeccC------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 386 FDKTALPVSAYDICLKMKERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 386 ~~~~~~~~~~~~~~~~l~~~Gv~~~~~------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
+. . .++.++++.|.++||.+.++ .++++|+++. +.+++++++++|+++++
T Consensus 306 ~~-~---~~~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRis~~---~~~~~~~l~~~L~~il~ 361 (361)
T PRK00950 306 VT-P---MTAKEFCEELLKRGVIVRDCTSFRGLGDYYIRVSIG---TFEENERFLEILKEIVE 361 (361)
T ss_pred CC-C---CCHHHHHHHHHHCCEEEeeCCccCCCCCCeEEEECC---CHHHHHHHHHHHHHHhC
Confidence 62 2 36789999999999999764 2568999943 78899999999998763
No 170
>PRK05839 hypothetical protein; Provisional
Probab=99.94 E-value=7.7e-25 Score=217.81 Aligned_cols=324 Identities=14% Similarity=0.044 Sum_probs=203.2
Q ss_pred CCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCC-CCCCCcHHHHHHHHhhhhC----CCeEEecCChhHHHHHH
Q 012138 74 GNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMFG----YDMVLPMNTGAEGVETA 148 (470)
Q Consensus 74 G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~----~~~v~~~~sGteA~~~a 148 (470)
|+.++||..|.+. ++ .++.+.+++.+.......++. ....++++.+++++++.+| .++|++|+|+++|+..+
T Consensus 23 ~~~~i~l~~~~p~--~~-~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~ 99 (374)
T PRK05839 23 EYKGLDLTIGEPQ--FE-TPKFIQDALKNNAHLLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFNF 99 (374)
T ss_pred CCCeEEcCCCCCC--CC-CCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHH
Confidence 7789999988644 33 467888888776644332222 2234567788888877654 56799999999999888
Q ss_pred HHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCC-eeeecCCCHHHHHHHHHhcCCCeEE
Q 012138 149 LKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-HLKVDFGDITALEKIFKESGDQIAG 227 (470)
Q Consensus 149 l~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~Le~~l~~~~~~~~~ 227 (470)
++++..- ++++.|++..|+|..........+.. ... .+...+ ...+ |+.+. .+ + ++++
T Consensus 100 ~~~~~~~--------~~gd~vlv~~P~y~~~~~~~~~~g~~-v~~---v~~~~~~~~~~---d~~~~--~~-~---~~k~ 158 (374)
T PRK05839 100 PQFVLFD--------KQNPTIAYPNPFYQIYEGAAIASRAK-VLL---MPLTKENDFTP---SLNEK--EL-Q---EVDL 158 (374)
T ss_pred HHHHhcC--------CCCCEEEECCCCchhhHHHHHhcCCE-EEE---eecccccCCcC---Ccchh--hh-c---cccE
Confidence 7765310 13458888899986654443322221 100 011000 0111 22222 22 2 5677
Q ss_pred EEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcccccc---------CCCCcceeecccccc-C
Q 012138 228 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDW---------EEVRPDMVILGKALG-G 297 (470)
Q Consensus 228 vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~---------~~~~pdi~s~sK~l~-g 297 (470)
|++..++||||.++ +.+.+++|+++|++||++||+||+|..|...+....... ++...-+.+|||.++ +
T Consensus 159 v~i~nP~NPTG~~~-s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~ 237 (374)
T PRK05839 159 VILNSPNNPTGRTL-SLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAP 237 (374)
T ss_pred EEEeCCCCCcCccc-CHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCc
Confidence 77444499999999 999999999999999999999999998743322211110 011112349999975 8
Q ss_pred CCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEE
Q 012138 298 GVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEV 375 (470)
Q Consensus 298 G~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~ 375 (470)
|+ |+||+++++++++.+........++.+.+.+.++.+++.. ++ +.++++++++.+.+.+.| + +. .
T Consensus 238 Gl-RiG~ii~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~l-------~--~~-~ 305 (374)
T PRK05839 238 GL-RSGFIAGDASILKKYKAYRTYLGCASPLPLQKAAAVAWLD-DEHAEFFRNIYAKNLKLAREIL-------G--IT-I 305 (374)
T ss_pred cc-eeEEEecCHHHHHHHHHHHhhcCCCCChHHHHHHHHHhcc-chHHHHHHHHHHHHHHHHHHhc-------C--CC-C
Confidence 98 9999999999988875443333445566666666655531 11 122333333333332221 1 11 2
Q ss_pred eccceeEEEEeccCCCchhHHHHHHHHHH-cCceeccCC--------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 376 RGRGLFNAVEFDKTALPVSAYDICLKMKE-RGILAKPTH--------DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 376 ~~~g~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~--------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
+..|.|+++.+. +..+++++|.+ +||.+.|+. .+++|++. ..+++++++++++|.++++
T Consensus 306 p~gg~fi~~~~~------~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~--~~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 306 PPATFYVWLPVD------NDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIAL--VYDTPKLEKALEIIKTYLE 373 (374)
T ss_pred CCeeEEEEEeCC------ChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEe--cCCHHHHHHHHHHHHHHhh
Confidence 334455555442 34678888875 799998852 48999995 4689999999999999875
No 171
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.94 E-value=1.4e-24 Score=214.34 Aligned_cols=318 Identities=18% Similarity=0.213 Sum_probs=212.0
Q ss_pred CeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHHHH
Q 012138 75 NKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLA 152 (470)
Q Consensus 75 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~~~ 152 (470)
..++||..+... ++ .++.+.+++.+.+.....+ ......++.+.++++++ .++|++|+|+++++..+++++
T Consensus 19 ~~~~~l~~~~~~--~~-~p~~~~~a~~~~~~~~~~Y----~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~~ 91 (354)
T PRK06358 19 NMILDFSANINP--LG-VPESLKQAITENLDKLVEY----PDPDYLELRKRIASFEQLDLENVILGNGATELIFNIVKVT 91 (354)
T ss_pred cceEEecCCCCC--CC-CCHHHHHHHHHHHHhhhcC----CCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHh
Confidence 346899876533 33 4789999998877554322 22224577777777764 568999999999999888764
Q ss_pred HHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCC-eeeecCCCHHHHHHHHHhcCCCeEEEE-E
Q 012138 153 RKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-HLKVDFGDITALEKIFKESGDQIAGFL-F 230 (470)
Q Consensus 153 ~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~Le~~l~~~~~~~~~vi-~ 230 (470)
. ++ .|++..|+|+.........+.. ... .+...+ .+.+ | +++.+.+.. ++++++ +
T Consensus 92 -~----------~~-~v~i~~P~y~~~~~~~~~~g~~-~~~---~~~~~~~~~~~---d-~~~~~~~~~---~~~~v~~~ 148 (354)
T PRK06358 92 -K----------PK-KVLILAPTFAEYERALKAFDAE-IEY---AELTEETNFAA---N-EIVLEEIKE---EIDLVFLC 148 (354)
T ss_pred -C----------CC-cEEEecCChHHHHHHHHHcCCe-eEE---EeCccccCCCc---c-HHHHHhhcc---CCCEEEEe
Confidence 2 23 6778999987654433222211 100 011000 0111 4 444444543 566664 6
Q ss_pred ccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccc-cccCCCCcc---eeecccccc-CCCcceeEE
Q 012138 231 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEEVRPD---MVILGKALG-GGVIPVSAV 305 (470)
Q Consensus 231 epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~-~~~~~~~pd---i~s~sK~l~-gG~~~ig~v 305 (470)
+| +||||.++ +.+.+++|.++|++||+++|+||+|..|...+.... .......+. +.||||.++ +|+ |+||+
T Consensus 149 ~P-~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~-RiG~l 225 (354)
T PRK06358 149 NP-NNPTGQLI-SKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGL-RLGYG 225 (354)
T ss_pred CC-CCCCCCcc-CHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcch-hheee
Confidence 77 99999999 999999999999999999999999998765543211 111111122 349999999 999 99999
Q ss_pred Ee-cHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEE
Q 012138 306 LA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNA 383 (470)
Q Consensus 306 ~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~ 383 (470)
++ ++.+++.+.... ..++.+.+++.++.++|+.-.. +...+.+++.++.+.+.|+++ | .+....+.|.|++
T Consensus 226 v~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~----~-~~~~~~~~g~f~~ 298 (354)
T PRK06358 226 LTSNKNLAEKLLQMR--EPWSINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEF----K-GIKVYKPSVNFIF 298 (354)
T ss_pred ecCCHHHHHHHHHhC--CCCcchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcC----C-CcEEcCCcceEEE
Confidence 97 467777775432 2566788888888777742111 233445555566666666542 2 3444466788877
Q ss_pred EEeccCCCchhHHHHHHHHHHcCceeccCC------CCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 012138 384 VEFDKTALPVSAYDICLKMKERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVL 441 (470)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~~~l 441 (470)
+.++ +..++++.|.++||.+.++. .+++|++ ..+.++.++++++|++++
T Consensus 299 ~~~~------~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls---~~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 299 FKLE------KPIDLRKELLKKGILIRSCSNYRGLDENYYRVA---VKSREDNKKLLKALEVIL 353 (354)
T ss_pred EEcC------chHHHHHHHHHCCeEEEECCCCCCCCCCEEEEE---eCCHHHHHHHHHHHHHHh
Confidence 7654 23689999999999998752 4689999 568899999999998875
No 172
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.94 E-value=9e-25 Score=216.02 Aligned_cols=324 Identities=15% Similarity=0.155 Sum_probs=211.4
Q ss_pred CCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHH
Q 012138 72 PEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETAL 149 (470)
Q Consensus 72 ~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al 149 (470)
.++..++||..|... +| .++.+.+++.+.+..... |......++.+.++++++ .++|++++|+++++..++
T Consensus 17 ~~~~~~i~l~~~~~~--~~-~p~~~~~a~~~~~~~~~~----y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~ 89 (356)
T PRK08056 17 ISPDQLLDFSANINP--LG-MPVSLKRAIIDNLDCAER----YPDVEYRHLHQALARHHQVPASWILAGNGETESIFAVV 89 (356)
T ss_pred CChhhEEEeccccCC--CC-CCHHHHHHHHHHHHhccc----CcCccHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHH
Confidence 346678899877433 44 778999999887765432 222235778888888775 467999999999999888
Q ss_pred HHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCC-eeeecCCCHHHHHHHHHhcCCCeEEE
Q 012138 150 KLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-HLKVDFGDITALEKIFKESGDQIAGF 228 (470)
Q Consensus 150 ~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~Le~~l~~~~~~~~~v 228 (470)
+.+ . +++ +++..|+|..........+.. ... .+..++ .+.. | +++++.+.. ++++|
T Consensus 90 ~~l-~---------~g~--viv~~P~y~~~~~~~~~~g~~-~~~---v~~~~~~~~~~---~-~~~~~~~~~---~~k~v 146 (356)
T PRK08056 90 SGL-K---------PRR--AMIVTPGFAEYRRALQQVGCE-IRR---YSLREADGWQL---T-DAILEALTP---DLDCL 146 (356)
T ss_pred HHh-C---------CCC--EEEeCCCcHHHHHHHHHcCCe-EEE---EecccccCCCc---c-HHHHHhccC---CCCEE
Confidence 764 3 343 555678885443322222111 110 011000 0011 2 344444543 67777
Q ss_pred EEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcc--ccccCCCCcceeecccccc-CCCcceeEE
Q 012138 229 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML--ASDWEEVRPDMVILGKALG-GGVIPVSAV 305 (470)
Q Consensus 229 i~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~--~~~~~~~~pdi~s~sK~l~-gG~~~ig~v 305 (470)
++..++||||.++ +.+.+++|.++|++||++||+||+|.+|...+..+ .........-+.||||.++ +|+ |+||+
T Consensus 147 ~l~~p~NPTG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~-RiG~~ 224 (356)
T PRK08056 147 FLCTPNNPTGLLP-ERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGL-RLGYL 224 (356)
T ss_pred EEeCCcCCCCCCC-CHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcch-hheee
Confidence 7544599999998 89999999999999999999999999875444211 1121211112349999999 998 99999
Q ss_pred Ee-cHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEE
Q 012138 306 LA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNA 383 (470)
Q Consensus 306 ~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~-~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~ 383 (470)
++ ++++++.+... ...++.+.+++.++.++++.-. ....++.++++++++.+.|+++ + .+...++.|.+++
T Consensus 225 v~~~~~~~~~l~~~--~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~----~-~~~~~~~~~~~~~ 297 (356)
T PRK08056 225 VNSDDAAVARMRRQ--QMPWSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCAL----P-LLTVWPGRANYLF 297 (356)
T ss_pred ecCCHHHHHHHHHh--CCCCchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcC----C-CcEEcCCCCcEEE
Confidence 97 46777766532 2345667777777766664110 1234455666666666666543 2 2333455677776
Q ss_pred EEeccCCCchhHHHHHHHHHHcCceeccCC------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 384 VEFDKTALPVSAYDICLKMKERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
+.+.. +..++++.|.++||.+.++. .+++|++. .+.++.+.+++.|+++++
T Consensus 298 ~~~~~-----~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~---~~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 298 LRCER-----PDIDLQRALLTQRILIRSCANYPGLDSRYYRVAI---RSAAENERLLAALRNVLT 354 (356)
T ss_pred EEcCC-----ChHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEE---cCHHHHHHHHHHHHHHHc
Confidence 65542 35679999999999987653 36899993 478999999999998875
No 173
>PRK03321 putative aminotransferase; Provisional
Probab=99.94 E-value=6.2e-25 Score=217.09 Aligned_cols=320 Identities=16% Similarity=0.168 Sum_probs=208.1
Q ss_pred eEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCC--CeEEecCChhHHHHHHHHHHH
Q 012138 76 KYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGY--DMVLPMNTGAEGVETALKLAR 153 (470)
Q Consensus 76 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~v~~~~sGteA~~~al~~~~ 153 (470)
.++|+..+... +| .+|.+.+++.+.+.....+ ...-..++++.++++++. ++|++++|.++++..++....
T Consensus 23 ~~i~l~~~~~~--~~-~~~~~~~a~~~~~~~~~~y----~~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~~ 95 (352)
T PRK03321 23 GAIKLSSNETP--FG-PLPSVRAAIARAAAGVNRY----PDMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQATA 95 (352)
T ss_pred cceeccCCCCC--CC-CCHHHHHHHHHHHHhcCcC----CCCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHhc
Confidence 47888887544 33 5678999998877654332 233457788888888764 479999988888888877654
Q ss_pred HhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccc
Q 012138 154 KWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPI 233 (470)
Q Consensus 154 ~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi 233 (470)
. +|+ .|++..++|...... ....+.... ..+..++ ..+ |++++++.++. ++++|+++.+
T Consensus 96 ~---------~gd-~Vli~~p~y~~~~~~-~~~~g~~~~---~v~~~~~-~~~---~~~~l~~~~~~---~~~~v~l~~p 154 (352)
T PRK03321 96 G---------PGD-EVIFAWRSFEAYPIL-VQVAGATPV---QVPLTPD-HTH---DLDAMAAAITD---RTRLIFVCNP 154 (352)
T ss_pred C---------CCC-EEEeCCCCHHHHHHH-HHHcCCEEE---EccCCCC-CCC---CHHHHHHhhcc---CCCEEEEeCC
Confidence 3 455 677777776432111 111111110 0111111 111 78999988865 6777776556
Q ss_pred cCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCc-cccccCCCCccee---ecccccc-CCCcceeEEEec
Q 012138 234 QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDWEEVRPDMV---ILGKALG-GGVIPVSAVLAD 308 (470)
Q Consensus 234 ~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~-~~~~~~~~~pdi~---s~sK~l~-gG~~~ig~v~~~ 308 (470)
+||+|.+++ .+.+.++.+.| ++|+++|+||+|.+|.+.+.. .........++++ ||||.++ +|+ |+||++++
T Consensus 155 ~NPtG~~~~-~~~l~~l~~~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~Gl-RiG~~v~~ 231 (352)
T PRK03321 155 NNPTGTVVT-PAELARFLDAV-PADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGL-RVGYAVGH 231 (352)
T ss_pred CCCcCCCcC-HHHHHHHHHhC-CCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHH-hhhhhcCC
Confidence 999999994 44444444443 269999999999987554432 1111122223443 8999998 898 99999999
Q ss_pred HHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEec
Q 012138 309 KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 387 (470)
Q Consensus 309 ~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~ 387 (470)
+++++.+... ...++.+.+++.++.++|..... .+..++..+..+.+.+.|++. .+...++.|.|+++.+.
T Consensus 232 ~~~~~~~~~~--~~~~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~------~~~~~~~~g~~i~i~l~ 303 (352)
T PRK03321 232 PEVIAALRKV--AVPFSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRAA------GWTVPPSQANFVWLPLG 303 (352)
T ss_pred HHHHHHHHHh--cCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC------CCccCCCCCCEEEEeCC
Confidence 9999988743 35677888998888877753221 112222333334454554442 12223456777666553
Q ss_pred cCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 388 KTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 388 ~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
. ...++++.|.++||.+.+.+.+.+|++ ..+.+++++++++|+++++
T Consensus 304 --~---~~~~~~~~l~~~gI~v~~~~~~~iRi~---~~~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 304 --E---RTADFAAAAAEAGVVVRPFAGEGVRVT---IGAPEENDAFLRAARAWRA 350 (352)
T ss_pred --C---CHHHHHHHHHHCCEEEEccCCCcEEEe---eCCHHHHHHHHHHHHHHhc
Confidence 2 467899999999999998767789999 4689999999999999876
No 174
>PRK09105 putative aminotransferase; Provisional
Probab=99.94 E-value=2.1e-24 Score=214.00 Aligned_cols=316 Identities=16% Similarity=0.098 Sum_probs=210.5
Q ss_pred CeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHHHH
Q 012138 75 NKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLA 152 (470)
Q Consensus 75 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~~~ 152 (470)
+.++++..+... ++ .+|.+.+++.+.+..... |..+...+|.+.++++++ .++|++|+|+++++..++..+
T Consensus 43 ~~~i~l~~~~~~--~~-~~~~~~~a~~~~~~~~~~----Y~~~~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l 115 (370)
T PRK09105 43 EGAVFLNANECP--LG-PSPAARDAAARSAALSGR----YDLELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAF 115 (370)
T ss_pred CCcEEecCCCCC--CC-CCHHHHHHHHHHHHHhcC----CCCchHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHH
Confidence 445667666432 33 678999999887754332 222336778888888875 568999999999999999877
Q ss_pred HHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEE-Ec
Q 012138 153 RKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFL-FE 231 (470)
Q Consensus 153 ~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi-~e 231 (470)
.. +|+ .|++.+|+|.+....+...+.. ... .+...+ ..+ |++++++. .. ++++++ ++
T Consensus 116 ~~---------~gd-~Vli~~P~y~~~~~~~~~~g~~-~~~---v~~~~~-~~~---d~~~l~~~-~~---~~~~v~l~n 173 (370)
T PRK09105 116 TS---------PTA-GLVTADPTYEAGWRAADAQGAP-VAK---VPLRAD-GAH---DVKAMLAA-DP---NAGLIYICN 173 (370)
T ss_pred cC---------CCC-EEEEeCCChHHHHHHHHHcCCe-EEE---ecCCCC-CCC---CHHHHHhc-CC---CCCEEEEeC
Confidence 54 455 7888999986654433322221 111 111111 111 67877765 22 456666 66
Q ss_pred cccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcce---eecccccc-CCCcceeEEEe
Q 012138 232 PIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM---VILGKALG-GGVIPVSAVLA 307 (470)
Q Consensus 232 pi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi---~s~sK~l~-gG~~~ig~v~~ 307 (470)
| +||||.++ +.+.++++.+.|+ +|+++|+||+|..|+..... .+..+..+++ .||||.++ .|+ |+||+++
T Consensus 174 P-~NPTG~~~-~~~~l~~l~~~~~-~~~~lIvDEaY~~f~~~~s~--~~~~~~~~~vi~~~SfSK~~g~~Gl-RiG~~v~ 247 (370)
T PRK09105 174 P-NNPTGTVT-PRADIEWLLANKP-AGSVLLVDEAYIHFSDAPSV--VDLVAQRKDLIVLRTFSKLYGMAGM-RLGLAAA 247 (370)
T ss_pred C-CCCCCcCc-CHHHHHHHHHhCC-CCcEEEEECchHHhccCcch--HHHHhhCCCEEEEecccHhhcCCcc-ceeeeec
Confidence 6 99999999 8888988888764 59999999999876432111 1111112343 38999998 898 9999999
Q ss_pred cHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEe
Q 012138 308 DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 386 (470)
Q Consensus 308 ~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~ 386 (470)
++++++.+... ..+..+.+++.++.++|+..+- +..+++++++++++.+.|++++ +...++.|.|+++.+
T Consensus 248 ~~~~i~~l~~~---~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g------~~~~~~~~~f~~~~~ 318 (370)
T PRK09105 248 RPDLLAKLARF---GHNPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKKG------YKCTPSQANCFMVDV 318 (370)
T ss_pred CHHHHHHHHhc---CCCCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHCC------CCcCCCCCcEEEEeC
Confidence 99999888653 2344667777777777753111 3344556666666766666531 333456777776654
Q ss_pred ccCCCchhHHHHHHHHHHcCceecc---CCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 387 DKTALPVSAYDICLKMKERGILAKP---THDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 387 ~~~~~~~~~~~~~~~l~~~Gv~~~~---~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
. . +..++++.|.++||.+.. ..++++|+++ .++++++++++.|+++++
T Consensus 319 ~--~---~~~~l~~~L~~~gI~v~~~~~~~~~~~Ris~---~~~~~~~~l~~al~~~~~ 369 (370)
T PRK09105 319 K--R---PAKAVADAMAKQGVFIGRSWPIWPNWVRVTV---GSEEEMAAFRSAFAKVMR 369 (370)
T ss_pred C--C---CHHHHHHHHHHCCcEEecCCCCCCCeEEEEc---CCHHHHHHHHHHHHHHhh
Confidence 3 2 567899999999999842 2368999993 368889999999988764
No 175
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=1.5e-24 Score=214.54 Aligned_cols=321 Identities=15% Similarity=0.160 Sum_probs=205.6
Q ss_pred CCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHHH
Q 012138 74 GNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKL 151 (470)
Q Consensus 74 G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~~ 151 (470)
++.+|||..+... ++ .+|.+.+++.+.+..... .|......++.+.++++++ .++|++|+|+++++..+++.
T Consensus 23 ~~~~i~l~~~~~~--~~-~~~~~~~a~~~~~~~~~~---~y~~~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~ 96 (353)
T PRK05387 23 LAKLIKLNTNENP--YP-PSPKVLEAIRAALGDDLR---LYPDPNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLA 96 (353)
T ss_pred ccceeeccCCCCC--CC-CCHHHHHHHHHHhhhhhh---cCCCCcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHH
Confidence 3567899988654 22 578999999887754211 1222234677777777775 46799999999999999997
Q ss_pred HHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEc
Q 012138 152 ARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFE 231 (470)
Q Consensus 152 ~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~e 231 (470)
+.. +|+ .|++.+|+|.......... +...... +... ...+ |++++++ . ....++++
T Consensus 97 l~~---------~gd-~vlv~~P~y~~~~~~~~~~-g~~~~~v---~~~~-~~~~---d~~~l~~---~---~~~v~~~~ 152 (353)
T PRK05387 97 FFN---------HDR-PLLFPDITYSFYPVYAGLY-GIPYEEI---PLDD-DFSI---DVEDYLR---P---NGGIIFPN 152 (353)
T ss_pred hcC---------CCC-EEEEeCCCHHHHHHHHHHc-CCEEEEe---ecCC-CCCC---CHHHHHh---c---CCEEEEeC
Confidence 765 465 7888888884433222111 1111100 1100 0112 6777752 1 22344566
Q ss_pred cccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecccccc-CCCcceeEEEecHH
Q 012138 232 PIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPVSAVLADKE 310 (470)
Q Consensus 232 pi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~-gG~~~ig~v~~~~~ 310 (470)
| +||||.++ +.+.+++|.+.++ |+++|+||+|..|+........+......-+.||||.++ +|+ |+||++++++
T Consensus 153 P-~NPtG~~~-~~~~~~~l~~~~~--~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl-R~G~~~~~~~ 227 (353)
T PRK05387 153 P-NAPTGIAL-PLAEIERILAANP--DSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSRSLAGL-RVGFAIGHPE 227 (353)
T ss_pred C-CCCCCCCC-CHHHHHHHHHhCC--CcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhhcchhh-hceeeecCHH
Confidence 6 99999999 6666666655443 999999999987742111101111111112338999998 998 9999999999
Q ss_pred HHhhcCcCCcc-CCCCCCHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEecc
Q 012138 311 VMLCIQPGEHG-STFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK 388 (470)
Q Consensus 311 ~~~~~~~~~~~-~t~~~~~~~~aaa~a~l~~~~-~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~ 388 (470)
+++.+...... .+++.+.+++.++.++++..+ -++.+++++++++++.+.|++++ +...++.|.++++.++
T Consensus 228 ~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g------~~~~~~~~~~~~~~~~- 300 (353)
T PRK05387 228 LIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEALG------FEVLPSKANFVFARHP- 300 (353)
T ss_pred HHHHHHHhhccCCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC------CeECCCcCcEEEEECC-
Confidence 98887644322 346678888888877775211 13455566666677777766541 2223445556555443
Q ss_pred CCCchhHHHHHHHHHHcCceeccC----CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 389 TALPVSAYDICLKMKERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 389 ~~~~~~~~~~~~~l~~~Gv~~~~~----~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
. .+..++++.|.++||.+.+. ..+++|+++. +++++++++++|++++.
T Consensus 301 ~---~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~~---~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 301 S---HDAAELAAKLRERGIIVRHFNKPRIDQFLRITIG---TDEEMEALVDALKEILA 352 (353)
T ss_pred C---CCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 2 25788999999999998543 2578999943 77999999999999875
No 176
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=2.1e-24 Score=214.88 Aligned_cols=321 Identities=12% Similarity=0.127 Sum_probs=209.6
Q ss_pred CCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHH
Q 012138 73 EGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALK 150 (470)
Q Consensus 73 ~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~ 150 (470)
.+..+||+..|..+ ++ .+|.+.+++.+. .... .|......++.+.++++++ .++|++|+|+++++..+++
T Consensus 50 ~~~~~i~l~~n~~p--~~-~~~~v~~a~~~~-~~~~----~Yp~~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~ 121 (380)
T PLN03026 50 KPEDIVKLDANENP--YG-PPPEVLEALGNM-KFPY----VYPDPESRRLRAALAEDSGLESENILVGCGADELIDLLMR 121 (380)
T ss_pred CccceEEccCCCCC--CC-CCHHHHHHHHhh-Hhhc----cCCCCCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHHHH
Confidence 35678999888533 33 678888887542 2111 1233345778888888875 4579999999999999988
Q ss_pred HHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEE
Q 012138 151 LARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLF 230 (470)
Q Consensus 151 ~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~ 230 (470)
.+.. +|+ .|++.+|+|..........+. .... .+... ...+ |+++|++++... ++++|++
T Consensus 122 ~~~~---------~gd-~Vlv~~P~y~~y~~~~~~~g~-~~~~---v~~~~-~~~~---d~~~l~~~~~~~--~~~~v~l 181 (380)
T PLN03026 122 CVLD---------PGD-KIIDCPPTFGMYVFDAAVNGA-EVIK---VPRTP-DFSL---DVPRIVEAVETH--KPKLLFL 181 (380)
T ss_pred HhcC---------CCC-EEEEcCCChHHHHHHHHHcCC-EEEE---eecCC-CCCc---CHHHHHHHHhcc--CCcEEEE
Confidence 7654 455 788888888543322222111 1110 01100 0112 789999888432 6777775
Q ss_pred ccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccc-cccCCCCcceeecccccc-CCCcceeEEEec
Q 012138 231 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEEVRPDMVILGKALG-GGVIPVSAVLAD 308 (470)
Q Consensus 231 epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~-~~~~~~~pdi~s~sK~l~-gG~~~ig~v~~~ 308 (470)
..++||||.+++ .+++.++++.. +++|+||+|..|...+.... .+..+...-+-||||.++ +|+ |+||++++
T Consensus 182 ~~P~NPTG~~~~----~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGl-RiGy~~~~ 255 (380)
T PLN03026 182 TSPNNPDGSIIS----DDDLLKILELP-ILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGL-RVGYGAFP 255 (380)
T ss_pred eCCCCCCCCCCC----HHHHHHHHhcC-CEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhhcCccc-cceeeecC
Confidence 556999999995 45555555543 89999999997754332211 111111112349999999 999 99999999
Q ss_pred HHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEec
Q 012138 309 KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 387 (470)
Q Consensus 309 ~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~ 387 (470)
+++++.+.... ..++.+.+++.++.++|+..+- ++.++.+++.++++.+.|+++. .+...+..|.|+++.+.
T Consensus 256 ~~~i~~l~~~~--~~~~~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~-----~~~~~p~~~~f~~~~~~ 328 (380)
T PLN03026 256 LSIIEYLWRAK--QPYNVSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVP-----FLEPYPSDANFILCRVT 328 (380)
T ss_pred HHHHHHHHHhc--CCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCC-----CCeECCCCCeEEEEECC
Confidence 99998876433 2466788888888888753111 3345566666677777776541 23333456777777654
Q ss_pred cCCCchhHHHHHHHHHHcCceeccCC----CCEEEEecCCCCCHHHHHHHHHHHHHH
Q 012138 388 KTALPVSAYDICLKMKERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHDV 440 (470)
Q Consensus 388 ~~~~~~~~~~~~~~l~~~Gv~~~~~~----~~~iR~~~~~~~t~e~i~~~~~~l~~~ 440 (470)
.. .++.++++.|.++||.+.++. .+++||++ .+.++++++++.|+++
T Consensus 329 ~~---~~~~~~~~~l~~~gI~v~~~~~~~~~~~lRis~---~~~~~~~~l~~al~~~ 379 (380)
T PLN03026 329 SG---RDAKKLKEDLAKMGVMVRHYNSKELKGYIRVSV---GKPEHTDALMEALKQL 379 (380)
T ss_pred CC---CCHHHHHHHHHHCCeEEEECCCCCCCCEEEEec---CCHHHHHHHHHHHHHh
Confidence 32 257789999999999987653 57999993 3778899999988764
No 177
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=1.9e-24 Score=213.84 Aligned_cols=321 Identities=17% Similarity=0.140 Sum_probs=211.9
Q ss_pred CCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCC---CeEEecCChhHHHHHHHH
Q 012138 74 GNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGY---DMVLPMNTGAEGVETALK 150 (470)
Q Consensus 74 G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~---~~v~~~~sGteA~~~al~ 150 (470)
+..++|+..+... ++ .+|.+++++.+.+...... .|......++.+.++++++. ++|++++|+++++..+++
T Consensus 25 ~~~~i~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~~--~Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~ 99 (356)
T PRK04870 25 ATGMVKLDAMENP--YR-LPAELRAELGERLAEVALN--RYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLAL 99 (356)
T ss_pred CCCceeCcCCCCC--CC-CCHHHHHHHHHHhhccccc--cCCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHH
Confidence 4568888777432 33 7799999999888642211 12222346788888887764 379999999999999888
Q ss_pred HHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEE
Q 012138 151 LARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLF 230 (470)
Q Consensus 151 ~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~ 230 (470)
++.. +|+ .|++..|+|.+....+...+.. .. +.+...+ ..+ |+++|+++++++ ++++|++
T Consensus 100 ~~~~---------~gd-~vlv~~P~y~~~~~~~~~~g~~-~~---~i~~~~~-~~~---d~~~l~~~~~~~--~~~~v~l 159 (356)
T PRK04870 100 ACAK---------PGA-TVLAPEPGFVMYRMSAKLAGLE-FV---GVPLTAD-FTL---DLPAMLAAIAEH--RPALVFL 159 (356)
T ss_pred HhcC---------CCC-EEEECCCCHHHHHHHHHHcCCE-EE---EecCCCC-CCC---CHHHHHHHhhcC--CCCEEEE
Confidence 7654 455 7888899986544332222211 11 1111111 122 789999998753 6777775
Q ss_pred ccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecccccc-CCCcceeEEEecH
Q 012138 231 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPVSAVLADK 309 (470)
Q Consensus 231 epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~-gG~~~ig~v~~~~ 309 (470)
..++||||.++ +.+.+++|.++| ++++|+||+|..|............+...-+.|||| ++ +|+ |+||+++++
T Consensus 160 ~~p~NPtG~~~-~~~~~~~i~~~~---~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK-~~~~Gl-RiG~~i~~~ 233 (356)
T PRK04870 160 AYPNNPTGNLF-DDADVERIIEAA---PGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSK-LGLAGL-RLGYLAGHP 233 (356)
T ss_pred cCCCCCCCCCC-CHHHHHHHHHHC---CCEEEEECCchhhcCcchHHHHhhCCCEEEEecchh-hhhHHH-hhhhhhCCH
Confidence 54599999999 788888888887 788999999987743211111111111122448999 55 798 999999999
Q ss_pred HHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEecc
Q 012138 310 EVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK 388 (470)
Q Consensus 310 ~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~ 388 (470)
++++.+.... ..++.+.+++.++..+++..+. ++..++++++++.+.+.|+++ | .+...+..|.|+++.++
T Consensus 234 ~~i~~~~~~~--~~~~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~-~~~~~~~~~~~~~~~~~- 305 (356)
T PRK04870 234 AWIAELDKVR--PPYNVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAAL----P-GVTVFPSAANFILVRVP- 305 (356)
T ss_pred HHHHHHHHcc--CCCcCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC----C-CcEECCCCCeEEEEECC-
Confidence 9988876433 3456777777777766653211 334455566666666666543 2 23434556767777554
Q ss_pred CCCchhHHHHHHHHHHcCceeccCC------CCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 012138 389 TALPVSAYDICLKMKERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVL 441 (470)
Q Consensus 389 ~~~~~~~~~~~~~l~~~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~~~l 441 (470)
+..++++.|.++||.+.++. .+++|+++ .+.+++++++++|++++
T Consensus 306 -----~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~---~~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 306 -----DAAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTV---GTPEENAQFLAALKAAL 356 (356)
T ss_pred -----CHHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeC---CCHHHHHHHHHHHHHhC
Confidence 35678899999999997652 57999993 37899999999998764
No 178
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.94 E-value=1.6e-24 Score=218.89 Aligned_cols=345 Identities=14% Similarity=0.088 Sum_probs=207.6
Q ss_pred eEEeccCCcccccCCCCC--HHHHHHHHHHHHHcc-------ccCCCCCCCcHHHHHHHHhhhhC----CCeEEecCChh
Q 012138 76 KYLDFLSAYSAVNQGHCH--PKIMKALQEQAEKLT-------LSSRAFYNDKFPVFAERLTSMFG----YDMVLPMNTGA 142 (470)
Q Consensus 76 ~~lD~~~~~~~~~lG~~~--p~v~~a~~~~~~~~~-------~~~~~~~~~~~~~l~~~l~~~~~----~~~v~~~~sGt 142 (470)
..+||..+... + ... +.+.+++.+.++... +.......++++.+++++.+.+| .++|++|+|++
T Consensus 31 ~~i~l~~g~p~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~ 107 (416)
T PRK09440 31 GAIMLGGGNPA--H-IPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQ 107 (416)
T ss_pred CceeccCCCCC--c-cCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChH
Confidence 35788776432 1 122 345666666554311 11112234566777777766543 46899999999
Q ss_pred HHHHHHHHHHHHhchhcccCCCCCcEEEE-EccCccccccchhcccCCcccccCCCCCCCC--eeeecCCCHHHHHHHHH
Q 012138 143 EGVETALKLARKWGYVKKKFSIDEAIIVS-CCGCFHGRTLAAISMSCDNEAIRGFGPLLPG--HLKVDFGDITALEKIFK 219 (470)
Q Consensus 143 eA~~~al~~~~~~~~~~~~~~~g~~~ii~-~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~Le~~l~ 219 (470)
+|+..+++++.... .. .+|+ .|++ ..|+|.+....+............+.+...+ .+.+ |+++|+ +.
T Consensus 108 ~al~~~~~~l~~~~--~~--~~gd-~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---d~~~l~--~~ 177 (416)
T PRK09440 108 SAFFYLFNLFAGRR--AD--GSLK-KILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHV---DFEHLH--ID 177 (416)
T ss_pred HHHHHHHHHHhccc--cC--CCCC-eEEEecCCCchhhHHHhhccCceeecccccccccccccccCC---CHHHcc--cC
Confidence 99999998775310 00 0244 5666 6899877654222111000000001111111 0112 778776 22
Q ss_pred hcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcccccc--CCCCcceeeccccccC
Q 012138 220 ESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDW--EEVRPDMVILGKALGG 297 (470)
Q Consensus 220 ~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~--~~~~pdi~s~sK~l~g 297 (470)
. +++++++..++||||.++ +.+.+++|.++|++||++||+||+|..+........... .+...-+.||||...+
T Consensus 178 ~---~~~~i~l~~P~NPTG~~~-s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~p 253 (416)
T PRK09440 178 E---DTGAICVSRPTNPTGNVL-TDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPLWNPNIILCMSLSKLGLP 253 (416)
T ss_pred C---CceEEEEecCCCCCCccC-CHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCccccCCeEEEecccccCCC
Confidence 2 566666444499999999 999999999999999999999999974311110000100 1111224599998668
Q ss_pred CCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHh--h---hhHHHHHHHHHHHHHHHHHHHHhhCCCce
Q 012138 298 GVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR--D---EKLAERSAHLGEELRQHLFKIQQQFPNYV 372 (470)
Q Consensus 298 G~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~--~---~~~~~~~~~~~~~l~~~L~~l~~~~p~~~ 372 (470)
|+ |+||+++++++++.+........++.+.+.+.++.++++.-. + +.+++.++++.+.+.+.|.+..... .+
T Consensus 254 Gl-RiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~--~~ 330 (416)
T PRK09440 254 GV-RCGIVIADEEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDE--PC 330 (416)
T ss_pred cc-eEEEEeCCHHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC--Ce
Confidence 98 999999999999888654444445677888888877765211 1 1133334445555555555432111 13
Q ss_pred EEEecc-ceeEEEEeccCCCchhHHHHHHHHHHcCceeccCC-------------CCEEEEecCCCCCHHHHHHHHHHHH
Q 012138 373 KEVRGR-GLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-------------DTIVRLTPPLSISSNELQEGSKALH 438 (470)
Q Consensus 373 ~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-------------~~~iR~~~~~~~t~e~i~~~~~~l~ 438 (470)
....+. |.++++.++... .+..++.+.|.++||.+.|+. .+++||++. .+++++++++++|.
T Consensus 331 ~~~~p~gg~fiw~~~~~~~--~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~--~~~~~l~~~i~~l~ 406 (416)
T PRK09440 331 LIHKPEGAIFLWLWFKDLP--ITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYV--QDDEEIEKGIAILA 406 (416)
T ss_pred EEecCCCceEEEEECCCCC--CCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEec--CCHHHHHHHHHHHH
Confidence 334565 455555554311 256789999999999998752 148999943 58999999999999
Q ss_pred HHHhccc
Q 012138 439 DVLELDL 445 (470)
Q Consensus 439 ~~l~~~~ 445 (470)
++++ +.
T Consensus 407 ~~~~-~~ 412 (416)
T PRK09440 407 EEVE-KA 412 (416)
T ss_pred HHHH-HH
Confidence 9998 54
No 179
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.94 E-value=1.8e-24 Score=214.88 Aligned_cols=324 Identities=19% Similarity=0.206 Sum_probs=208.7
Q ss_pred eEEeccCCcccccCCCCCHHHHHHHHHHHH-Hc-cccCCCCCC-CcHHHHHHHHhhhhC--------CC-eEEecCChhH
Q 012138 76 KYLDFLSAYSAVNQGHCHPKIMKALQEQAE-KL-TLSSRAFYN-DKFPVFAERLTSMFG--------YD-MVLPMNTGAE 143 (470)
Q Consensus 76 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~-~~-~~~~~~~~~-~~~~~l~~~l~~~~~--------~~-~v~~~~sGte 143 (470)
++|||.++-.. +++.+|.+.+++.+..+ .. ......|.. .-..++++.++++++ .+ .+++++|..+
T Consensus 2 ~~I~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~ 79 (363)
T PF00155_consen 2 DVINLGSNAPL--LLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQA 79 (363)
T ss_dssp TEEESSSSSTS--STTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHH
T ss_pred CEEEEECCCCC--CcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEeccccc
Confidence 46888877432 33355555555554443 11 111112222 225677777777665 56 6777776666
Q ss_pred HHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeec-------CCCHHHHHH
Q 012138 144 GVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVD-------FGDITALEK 216 (470)
Q Consensus 144 A~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~Le~ 216 (470)
++..++.++.. .+.+.|++.+|+|.+........ +.. +..++ +.|+++|++
T Consensus 80 ~~~~~~~~~~~---------~~~~~vlv~~P~y~~~~~~~~~~-g~~------------~~~~~~~~~~~~~~d~~~l~~ 137 (363)
T PF00155_consen 80 ALFLLLRLLKI---------NPGDTVLVPDPCYPSYIEAARLL-GAE------------VIPVPLDSENDFHLDPEALEE 137 (363)
T ss_dssp HHHHHHHHHHS---------STTSEEEEEESSSTHHHHHHHHT-TSE------------EEEEEEEETTTTEETHHHHHH
T ss_pred chhhhhhcccc---------cccccceecCCcccccccccccc-Cce------------eeecccccccccccccccccc
Confidence 66666665521 13347888999986544333222 211 12222 238999999
Q ss_pred HHHhcC-C--CeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcc-c-cccCCCCcc---e
Q 012138 217 IFKESG-D--QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-A-SDWEEVRPD---M 288 (470)
Q Consensus 217 ~l~~~~-~--~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~-~-~~~~~~~pd---i 288 (470)
.+++.. . ++++|++..++||||.++ +.+.+++|.++|++||++||+||+|.++......+ . .....-.++ +
T Consensus 138 ~l~~~~~~~~~~~~v~~~~p~nPtG~~~-~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~ 216 (363)
T PF00155_consen 138 ALDELPSKGPRPKAVLICNPNNPTGSVL-SLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVV 216 (363)
T ss_dssp HHHTSHTTTETEEEEEEESSBTTTTBB---HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEE
T ss_pred ccccccccccccceeeeccccccccccc-ccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceee
Confidence 998742 2 356777666699999999 99999999999999999999999999765443211 0 111111223 3
Q ss_pred eecccccc-CCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh-----hhHHHHHHHHHHHHHHHHH
Q 012138 289 VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-----EKLAERSAHLGEELRQHLF 362 (470)
Q Consensus 289 ~s~sK~l~-gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~-----~~~~~~~~~~~~~l~~~L~ 362 (470)
.||||.++ .|+ |+|++++++++++.++....... .+.+.++++.+.+..-.. +..++.++++.+++.+.|+
T Consensus 217 ~S~SK~~g~~Gl-RvG~i~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~ 293 (363)
T PF00155_consen 217 GSLSKSFGLPGL-RVGYIVAPPELIERLRRFQRSGL--SSSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALE 293 (363)
T ss_dssp EESTTTTTSGGG-TEEEEEEEHHHHHHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eecccccccccc-ccccccchhhhhhhhhhcccccc--ccchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHH
Confidence 39999998 898 99999999999998875433332 266666666665554321 4455666666666777666
Q ss_pred HHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHc-CceeccC----CCCEEEEecCCCCCHHHHHHHHHHH
Q 012138 363 KIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT----HDTIVRLTPPLSISSNELQEGSKAL 437 (470)
Q Consensus 363 ~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~----~~~~iR~~~~~~~t~e~i~~~~~~l 437 (470)
+. .+....+.+.++.|..... .+..+++++|+++ ||.+.|+ ..+++|+++ ..+++|++++++++|
T Consensus 294 ~~------~~~~~~~~~~~~~~~~~~~---~~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 294 EI------GITVLPPEAGFFLWVRLDP---NDAEELAQELLEEYGILVRPGSYFGVPGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp HT------TSEEEHHSBSSEEEEEESH---HHHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred Hh------hhheeeccCccEEEEEccc---chHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEe-ccCCHHHHHHHHhhC
Confidence 64 2455556566666633221 1578999999998 9999874 378999996 589999999999986
No 180
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.93 E-value=6.5e-24 Score=212.74 Aligned_cols=330 Identities=17% Similarity=0.180 Sum_probs=212.3
Q ss_pred CeEEeccCCcccccCCCCCHHHHHHHHHHHHHcccc-----CCCCCCCcHHHHHHHHhhhh----CCCeEEecCChhHHH
Q 012138 75 NKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLS-----SRAFYNDKFPVFAERLTSMF----GYDMVLPMNTGAEGV 145 (470)
Q Consensus 75 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~-----~~~~~~~~~~~l~~~l~~~~----~~~~v~~~~sGteA~ 145 (470)
..++||..+.+. ...++.+.+++.+.++..... ......+++..+++++...+ ..+++++|+|+++++
T Consensus 33 ~~~~~l~~g~p~---~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al 109 (394)
T PRK06836 33 DNVFDFSLGNPS---VPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGAL 109 (394)
T ss_pred CCeEEecCcCCC---CCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHH
Confidence 356788777432 225678888888776542111 11122334455566555433 356899999999999
Q ss_pred HHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCe
Q 012138 146 ETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 225 (470)
Q Consensus 146 ~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~ 225 (470)
..+++.+.. +|+ .|++.+++|.+.......... ... +.+..++...+ |++++++++++ ++
T Consensus 110 ~~~~~~l~~---------~gd-~Vli~~p~~~~~~~~~~~~g~-~v~---~v~~~~~~~~~---d~~~l~~~~~~---~~ 169 (394)
T PRK06836 110 NVALKAILN---------PGD-EVIVFAPYFVEYRFYVDNHGG-KLV---VVPTDTDTFQP---DLDALEAAITP---KT 169 (394)
T ss_pred HHHHHHhcC---------CCC-EEEEcCCCCccHHHHHHHcCC-EEE---EEecCCccCcC---CHHHHHhhcCc---Cc
Confidence 999887654 455 777788888765433222211 111 11111111122 78999998865 68
Q ss_pred EEEEEccccCCCccccCChhhHHHHHHHHHh------cCcEEEEeccccCCcccCCcc-c-cccCCCCcceeecccccc-
Q 012138 226 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK------YNILMIADEIQSGLARSGRML-A-SDWEEVRPDMVILGKALG- 296 (470)
Q Consensus 226 ~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~------~gillI~Dev~~g~g~~G~~~-~-~~~~~~~pdi~s~sK~l~- 296 (470)
++|++..++||+|.++ +.+.+++|.++|++ ||+++|+||+|.+|...+... . ...++...-+.||||.++
T Consensus 170 ~~v~~~~p~NPtG~~~-~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 248 (394)
T PRK06836 170 KAVIINSPNNPTGVVY-SEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSL 248 (394)
T ss_pred eEEEEeCCCCCCCcCC-CHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhccC
Confidence 8888666799999999 89999999999999 899999999999875444221 1 111211112348999998
Q ss_pred CCCcceeEEEecHHHHhh------cCcCCc-cCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCC
Q 012138 297 GGVIPVSAVLADKEVMLC------IQPGEH-GSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFP 369 (470)
Q Consensus 297 gG~~~ig~v~~~~~~~~~------~~~~~~-~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p 369 (470)
+|+ |+||+++++++.+. +..... ...++.+.+.+.++...++ +....+.++++.+.+.+.|++.
T Consensus 249 pGl-RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~r~~l~~~L~~~----- 319 (394)
T PRK06836 249 PGE-RIGYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLD---ATVDVSIYKRNRDLLYDGLTEL----- 319 (394)
T ss_pred cce-eeEEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHhC-----
Confidence 898 99999998876432 111111 1123456666666554443 2223445566666666666553
Q ss_pred CceEEEeccceeEEE-EeccCCCchhHHHHHHHHHHcCceeccCC----CCEEEEecCCCCCHHHHHHHHHHHHHHHhcc
Q 012138 370 NYVKEVRGRGLFNAV-EFDKTALPVSAYDICLKMKERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHDVLELD 444 (470)
Q Consensus 370 ~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~----~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 444 (470)
.+....+.|.++.| .++. . +..++++.|.++||.+.|+. .+++||++. .+++++++++++|+++++ +
T Consensus 320 -g~~~~~~~gg~~~~~~~~~-~---~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~--~~~~~~~~~i~~l~~~l~-~ 391 (394)
T PRK06836 320 -GFECVKPQGAFYLFPKSPE-E---DDVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYC--VDTETIERSLPAFEKLAK-E 391 (394)
T ss_pred -CCEeecCCceEEEEEeCCC-C---CHHHHHHHHHhCCEEEECchhcCCCCeEEEEec--CCHHHHHHHHHHHHHHHH-H
Confidence 13334555555555 3332 2 56788899999999998873 579999964 689999999999999998 6
Q ss_pred c
Q 012138 445 L 445 (470)
Q Consensus 445 ~ 445 (470)
.
T Consensus 392 ~ 392 (394)
T PRK06836 392 Y 392 (394)
T ss_pred h
Confidence 5
No 181
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=9.3e-24 Score=208.36 Aligned_cols=318 Identities=16% Similarity=0.148 Sum_probs=208.7
Q ss_pred EEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCC--CeEEecCChhHHHHHHHHHHHH
Q 012138 77 YLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGY--DMVLPMNTGAEGVETALKLARK 154 (470)
Q Consensus 77 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~v~~~~sGteA~~~al~~~~~ 154 (470)
.+|+..|... ++ .++.+.+++.+.+..... ..|..+...++++.++++++. ++|++|+|+++++..+++++..
T Consensus 24 ~~~l~~~~~~--~~-~p~~~~~a~~~~~~~~~~--~~y~~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l~~ 98 (351)
T PRK14807 24 KYKMDANETP--FE-LPEEVIKNIQEIVKSSQV--NIYPDPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAFIN 98 (351)
T ss_pred eeEccCCCCC--CC-CCHHHHHHHHHHhhcCcc--cCCCCccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHhcC
Confidence 3577766432 22 678999999887753221 123333457788888888764 6799999999999998887654
Q ss_pred hchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEcccc
Q 012138 155 WGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQ 234 (470)
Q Consensus 155 ~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~ 234 (470)
+|+ .|++..|+|.+........+.. ... .+... ...+ |++++++++++. ++++|+++.++
T Consensus 99 ---------~gd-~Vlv~~p~y~~~~~~~~~~g~~-~~~---v~~~~-~~~~---d~~~l~~~~~~~--~~k~v~l~~p~ 158 (351)
T PRK14807 99 ---------KGD-VVIYPHPSFAMYSVYSKIAGAV-EIP---VKLKE-DYTY---DVGSFIKVIEKY--QPKLVFLCNPN 158 (351)
T ss_pred ---------CCC-EEEEeCCChHHHHHHHHHcCCe-EEE---eecCC-CCCC---CHHHHHHHhhcc--CCCEEEEeCCC
Confidence 455 7788899986543322222211 111 01100 0112 789999988753 67777765669
Q ss_pred CCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccc-cccCCCCcceeecccccc-CCCcceeEEEecHHHH
Q 012138 235 GEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEEVRPDMVILGKALG-GGVIPVSAVLADKEVM 312 (470)
Q Consensus 235 n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~-~~~~~~~pdi~s~sK~l~-gG~~~ig~v~~~~~~~ 312 (470)
||||.+++ .+++.++|++++.++|+||+|.+|. ...... .+..+...-+-||||.++ +|+ |+||++++++++
T Consensus 159 NPtG~~~~----~~~l~~l~~~~~~~~ivDe~y~~~~-~~~~~~~~~~~~~vi~~~S~SK~~~~~Gl-RiG~~v~~~~~~ 232 (351)
T PRK14807 159 NPTGSVIE----REDIIKIIEKSRGIVVVDEAYFEFY-GNTIVDVINEFENLIVLRTLSKAFGLAGL-RVGYAVANENIL 232 (351)
T ss_pred CCCCCCCC----HHHHHHHHHhCCCEEEEeCcchhhc-ccchHHHhhhCCCEEEEecchHhcccchh-ceeeeecCHHHH
Confidence 99999996 6777778888888999999998763 211111 111111122349999998 999 999999999999
Q ss_pred hhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCc
Q 012138 313 LCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP 392 (470)
Q Consensus 313 ~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~ 392 (470)
+.+..... .+..+.+++.++.+.++.-.-++..+.++++++.+.+.|++ ++ .+...++.|.++++.+.
T Consensus 233 ~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~----~~-g~~~~~~~~~~~~i~~~----- 300 (351)
T PRK14807 233 KYLNLVKS--PYNINSLSQVIALKVLRTGVLKERVNYILNERERLIKELSK----IP-GIKVYPSKTNFILVKFK----- 300 (351)
T ss_pred HHHHHccC--CCCcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh----CC-CcEECcCCccEEEEEcC-----
Confidence 88864322 35567788888877775311123334455555556555543 22 34444556776666543
Q ss_pred hhHHHHHHHHHHcCceeccCC-----CCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 012138 393 VSAYDICLKMKERGILAKPTH-----DTIVRLTPPLSISSNELQEGSKALHDVL 441 (470)
Q Consensus 393 ~~~~~~~~~l~~~Gv~~~~~~-----~~~iR~~~~~~~t~e~i~~~~~~l~~~l 441 (470)
+..++++.|.++||.+.+.. .+++||++ .+.++.+++++.|++++
T Consensus 301 -~~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~---~~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 301 -DADYVYQGLLERGILVRDFSKVEGLEGALRITV---SSCEANDYLINGLKELL 350 (351)
T ss_pred -CHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEc---CCHHHHHHHHHHHHHhh
Confidence 35788999999999986542 57899993 36788899999998764
No 182
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.93 E-value=2.2e-24 Score=217.16 Aligned_cols=336 Identities=13% Similarity=0.110 Sum_probs=205.2
Q ss_pred CCeEEeccCCcccccCCCCCHHHHHHHHHHHHHcc-------ccCCCCCCCcHHHHHHHHhhhh----CCCeEEecCChh
Q 012138 74 GNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLT-------LSSRAFYNDKFPVFAERLTSMF----GYDMVLPMNTGA 142 (470)
Q Consensus 74 G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-------~~~~~~~~~~~~~l~~~l~~~~----~~~~v~~~~sGt 142 (470)
+..++|+..+.... ..+|.+.+++.+.+.... +.+.....++++.+++++.+.. ..++|++|+|++
T Consensus 33 ~~~~i~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~ 109 (409)
T PRK07590 33 EAKIIRLGIGDVTQ---PLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAK 109 (409)
T ss_pred CCceEEecCcCCCC---CCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHH
Confidence 45577888775332 267889999988886532 1111223345566666654433 346899999999
Q ss_pred HHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcC
Q 012138 143 EGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG 222 (470)
Q Consensus 143 eA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~ 222 (470)
+++..++.+ .. +|+ .|++.+|+|.+............ ...+.+.+ ..+..++.+.-+.++.-+.+
T Consensus 110 ~al~~l~~~-~~---------~gd-~V~v~~P~Y~~~~~~~~~~g~~~-~~~~~~~~-~~~~~v~~~~~~~~~~d~~~-- 174 (409)
T PRK07590 110 CDTGNILDI-FG---------PDN-TIAVTDPVYPVYVDTNVMAGRTG-EANEDGRY-SGIVYLPCTAENNFVPELPE-- 174 (409)
T ss_pred HHHHHHHHh-cC---------CCC-EEEEeCCCCcchHHHHHHcCCcc-cccccccc-cceeEeecccccCCcccCcc--
Confidence 999875432 22 455 78889999977654333322210 00000000 00122222100001000111
Q ss_pred CCeEEEE-EccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCc-cccccC-C---CCcceeecccccc
Q 012138 223 DQIAGFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDWE-E---VRPDMVILGKALG 296 (470)
Q Consensus 223 ~~~~~vi-~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~-~~~~~~-~---~~pdi~s~sK~l~ 296 (470)
.++++|+ ++| +||||.++ +.+.+++|.++|++||++||+||+|..|...+.. ...... + ....+.||||.++
T Consensus 175 ~~~k~i~l~nP-~NPTG~~~-s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~ 252 (409)
T PRK07590 175 EKVDIIYLCFP-NNPTGTVL-TKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAG 252 (409)
T ss_pred cCceEEEEeCC-CCCcCCcC-CHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccC
Confidence 2677777 555 99999999 9999999999999999999999999987544422 111111 1 1123448999997
Q ss_pred -CCCcceeEEEecHHHHhhcCc-----------CCccCCC-CCCHHHHHHHHHHHHH-Hhh--hhHHHHHHHHHHHHHHH
Q 012138 297 -GGVIPVSAVLADKEVMLCIQP-----------GEHGSTF-GGNPLASAVAIASLDV-IRD--EKLAERSAHLGEELRQH 360 (470)
Q Consensus 297 -gG~~~ig~v~~~~~~~~~~~~-----------~~~~~t~-~~~~~~~aaa~a~l~~-~~~--~~~~~~~~~~~~~l~~~ 360 (470)
+|+ |+||+++++++++.+.. ......+ +.+.+++.++.++++. ..+ ..+++.++++.+.+.+.
T Consensus 253 ~pGl-RiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~ 331 (409)
T PRK07590 253 FTGT-RCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREG 331 (409)
T ss_pred CcCc-eeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 998 99999999998873210 0112223 4577777777666642 111 23455666666667666
Q ss_pred HHHHHhhCCCceEEEecc-ceeEEEEeccCCCchhHHHHHHHHHH-cCceeccCC------CCEEEEecCCCCCHHHHHH
Q 012138 361 LFKIQQQFPNYVKEVRGR-GLFNAVEFDKTALPVSAYDICLKMKE-RGILAKPTH------DTIVRLTPPLSISSNELQE 432 (470)
Q Consensus 361 L~~l~~~~p~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~ 432 (470)
|++. .+....+. |.++++.+... .++.++++.|.+ +||.+.|+. .+++|++ +..+++++++
T Consensus 332 L~~~------~~~~~~~~g~~f~wi~~~~~---~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~--~~~~~~~l~~ 400 (409)
T PRK07590 332 LESA------GFEVYGGVNAPYIWVKTPDG---MSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLS--AFGSRENVLE 400 (409)
T ss_pred HHhc------CCceecCCcceEEEEECCCC---CCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEE--ccCCHHHHHH
Confidence 6653 13333454 44555555432 256778888765 599998763 4699999 4578999999
Q ss_pred HHHHHHHHH
Q 012138 433 GSKALHDVL 441 (470)
Q Consensus 433 ~~~~l~~~l 441 (470)
++++|.+++
T Consensus 401 ~l~rl~~~~ 409 (409)
T PRK07590 401 AMERIKKAL 409 (409)
T ss_pred HHHHHHhhC
Confidence 999998764
No 183
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.93 E-value=1.5e-23 Score=210.75 Aligned_cols=340 Identities=14% Similarity=0.146 Sum_probs=211.9
Q ss_pred CCCeEEeccCCcccc-cCCCCCHHHHHHHHHHHHHccccCCCC-CCCcHHHHHHHHhhhhC--------CCeEEecCChh
Q 012138 73 EGNKYLDFLSAYSAV-NQGHCHPKIMKALQEQAEKLTLSSRAF-YNDKFPVFAERLTSMFG--------YDMVLPMNTGA 142 (470)
Q Consensus 73 ~G~~~lD~~~~~~~~-~lG~~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~~--------~~~v~~~~sGt 142 (470)
.|..++|+..+.+.. +.-..++.+.+++.+.++..... .| ...-..++.+.++++++ .+++++|+|++
T Consensus 29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~--~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t 106 (403)
T TIGR01265 29 PEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFN--GYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCS 106 (403)
T ss_pred cCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCC--CCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChH
Confidence 466788888886531 22336788999998887643211 11 12223344444554442 35799999999
Q ss_pred HHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCC-eeeecCCCHHHHHHHHHhc
Q 012138 143 EGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-HLKVDFGDITALEKIFKES 221 (470)
Q Consensus 143 eA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~Le~~l~~~ 221 (470)
+|+..+++++.. +|+ .|++..++|.............. .+.+..++ ...+ |++++++++..
T Consensus 107 ~al~~~~~~l~~---------~gd-~Vlv~~p~y~~~~~~~~~~g~~~----~~~~~~~~~~~~~---d~~~l~~~~~~- 168 (403)
T TIGR01265 107 QAIEICIEALAN---------PGA-NILVPRPGFPLYDTRAAFSGLEV----RLYDLLPEKDWEI---DLDGLEALADE- 168 (403)
T ss_pred HHHHHHHHHhCC---------CCC-EEEEeCCCchhHHHHHHHcCCEE----EEecCCcccCCcc---CHHHHHHHhCc-
Confidence 999999997753 455 67888888754333222211110 01111111 1122 78999888865
Q ss_pred CCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcc-ccccCCCCc---ceeecccccc-
Q 012138 222 GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWEEVRP---DMVILGKALG- 296 (470)
Q Consensus 222 ~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~-~~~~~~~~p---di~s~sK~l~- 296 (470)
+++++++..++||+|.++ +.+.+++|.++|+++|+++|+||+|..|.+.+..+ ....+.-.. -+.||||.++
T Consensus 169 --~~~~v~i~~p~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~ 245 (403)
T TIGR01265 169 --KTVAIVVINPSNPCGSVF-SRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVV 245 (403)
T ss_pred --CccEEEEecCCCCCCCCC-CHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCC
Confidence 566666544499999999 89999999999999999999999999886555321 111111111 2338999964
Q ss_pred CCCcceeEEEec--HH-----HHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHh
Q 012138 297 GGVIPVSAVLAD--KE-----VMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQ 366 (470)
Q Consensus 297 gG~~~ig~v~~~--~~-----~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~ 366 (470)
+|+ |+||+++. ++ +.+.+.... ..+++.+.+++.++.++++...+ +..++.++++.+.+.+.|+.
T Consensus 246 pGl-RiG~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~--- 320 (403)
T TIGR01265 246 PGW-RLGWIIIHDPHGIFRDTVLQGLKNLL-QRILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKD--- 320 (403)
T ss_pred Ccc-eEEEEEEeCchhhhHHHHHHHHHHHh-hhhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc---
Confidence 898 99999973 22 333332221 12345678888888777753111 23444455555555555544
Q ss_pred hCCCceEEEec-cceeEEEEeccCCC--chhHHHHHHHH-HHcCceeccCC----CCEEEEecCCCCCHHHHHHHHHHHH
Q 012138 367 QFPNYVKEVRG-RGLFNAVEFDKTAL--PVSAYDICLKM-KERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALH 438 (470)
Q Consensus 367 ~~p~~~~~~~~-~g~~~~~~~~~~~~--~~~~~~~~~~l-~~~Gv~~~~~~----~~~iR~~~~~~~t~e~i~~~~~~l~ 438 (470)
+| .+....+ .|.|+++.++.... ..+..++++.| .++||.+.|+. .+++|++. ..+++.+++++++|.
T Consensus 321 -~~-~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~--~~~~~~l~~~l~~l~ 396 (403)
T TIGR01265 321 -IP-GLVCPKPEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITI--TVPESMLEEACSRIK 396 (403)
T ss_pred -CC-CceecCCCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEe--cCCHHHHHHHHHHHH
Confidence 22 2333334 45566665543210 01466788886 46799998863 68999994 467899999999999
Q ss_pred HHHhccc
Q 012138 439 DVLELDL 445 (470)
Q Consensus 439 ~~l~~~~ 445 (470)
++++ +.
T Consensus 397 ~~~~-~~ 402 (403)
T TIGR01265 397 EFCE-RH 402 (403)
T ss_pred HHHH-hc
Confidence 9887 53
No 184
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.93 E-value=3.9e-24 Score=210.96 Aligned_cols=284 Identities=20% Similarity=0.208 Sum_probs=197.7
Q ss_pred HHHHHHHHhhhhC----CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCccccc
Q 012138 119 FPVFAERLTSMFG----YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIR 194 (470)
Q Consensus 119 ~~~l~~~l~~~~~----~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~ 194 (470)
+..+++++...++ .+.+++++|+++|+..++..+.. +|+ .|++..++|++...........
T Consensus 42 ~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~---------~g~-~vl~~~~~~~~~~~~~~~~~~~----- 106 (350)
T cd00609 42 REAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLN---------PGD-EVLVPDPTYPGYEAAARLAGAE----- 106 (350)
T ss_pred HHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCC---------CCC-EEEEcCCCchhHHHHHHHCCCE-----
Confidence 4444444444433 56799999999999999987754 344 7888888865543332222111
Q ss_pred CCCCCCCCeeeecCC-----C--HHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccc
Q 012138 195 GFGPLLPGHLKVDFG-----D--ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 267 (470)
Q Consensus 195 ~~~~~~~~~~~~~~~-----d--~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~ 267 (470)
...++.+ + .+.++.... +++++|++++++||+|.+. +.+++++|.++|+++|+++|+||+|
T Consensus 107 --------~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~v~i~~~~~~tG~~~-~~~~l~~l~~~~~~~~~~~ivD~a~ 174 (350)
T cd00609 107 --------VVPVPLDEEGGFLLDLELLEAAKT---PKTKLLYLNNPNNPTGAVL-SEEELEELAELAKKHGILIISDEAY 174 (350)
T ss_pred --------EEEEecccccCCccCHHHHHhhcC---ccceEEEEECCCCCCCccc-CHHHHHHHHHHHHhCCeEEEEecch
Confidence 1222221 1 144444433 3789999888899999998 7888999999999999999999999
Q ss_pred cCCcccCCcc----ccccCCCCcceeecccccc-CCCcceeEEEecH-HHHhhcCcCCccCCCCCCHHHHHHHHHHHHHH
Q 012138 268 SGLARSGRML----ASDWEEVRPDMVILGKALG-GGVIPVSAVLADK-EVMLCIQPGEHGSTFGGNPLASAVAIASLDVI 341 (470)
Q Consensus 268 ~g~g~~G~~~----~~~~~~~~pdi~s~sK~l~-gG~~~ig~v~~~~-~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~ 341 (470)
+++...+... ..+..+....+.+++|.++ +|. ++|++++++ ++.+.+.......+++.+..++.++..+++..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~-~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 253 (350)
T cd00609 175 AELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGL-RIGYLIAPPEELLERLKKLLPYTTSGPSTLSQAAAAAALDDG 253 (350)
T ss_pred hhceeCCcccccccCcCccCcEEEEeecccccCCccc-ceEEEecCHHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCc
Confidence 9876555432 1222222233448999999 887 999999999 78888876555556778888888888888866
Q ss_pred h--hhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccC------C
Q 012138 342 R--DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT------H 413 (470)
Q Consensus 342 ~--~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~------~ 413 (470)
. -+.+.++++++.+++.+.|++.... .+ .....|.+.++.+.... ....+.+.|.+.||.+.++ .
T Consensus 254 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~---~~-~~~~~g~~~~~~~~~~~---~~~~~~~~l~~~gi~i~~~~~~~~~~ 326 (350)
T cd00609 254 EEHLEELRERYRRRRDALLEALKELGPL---VV-VKPSGGFFLWLDLPEGD---DEEFLERLLLEAGVVVRPGSAFGEGG 326 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCc---cc-cCCCccEEEEEecCCCC---hHHHHHHHHHhCCEEEecccccccCC
Confidence 2 2556777788888888888775322 11 23455666666554332 4566777777779999876 5
Q ss_pred CCEEEEecCCCCCHHHHHHHHHHHHH
Q 012138 414 DTIVRLTPPLSISSNELQEGSKALHD 439 (470)
Q Consensus 414 ~~~iR~~~~~~~t~e~i~~~~~~l~~ 439 (470)
.+++|++++.. ++|+++++++|++
T Consensus 327 ~~~iRi~~~~~--~~~i~~~~~al~~ 350 (350)
T cd00609 327 EGFVRLSFATP--EEELEEALERLAE 350 (350)
T ss_pred CCeEEEEeeCC--HHHHHHHHHHhhC
Confidence 68999998766 9999999998863
No 185
>PLN02672 methionine S-methyltransferase
Probab=99.93 E-value=7.6e-24 Score=227.15 Aligned_cols=340 Identities=13% Similarity=0.114 Sum_probs=222.7
Q ss_pred EEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCC-----CeEEecCChh
Q 012138 68 SIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGY-----DMVLPMNTGA 142 (470)
Q Consensus 68 ~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-----~~v~~~~sGt 142 (470)
++++.+|..+|++..|-. ....+|.+.+++.+.+....++ ..+.+++.++++++++.+|. ++|++++|.+
T Consensus 690 ~~~~~~g~~vI~LsinE~---d~ppPp~V~eAi~eal~~~~~s--~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~ 764 (1082)
T PLN02672 690 SVSGSQESSLIHMDVDES---FLPVPSAVKASIFESFVRQNIS--ESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSL 764 (1082)
T ss_pred CCcccCCCCEEEEeCCCC---CCCCCHHHHHHHHHHHhhcCCC--CCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHH
Confidence 345566788999988843 3338899999999887654331 12445688999999988653 2689999988
Q ss_pred HHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCC-CeeeecCCCHHHHHHHHHhc
Q 012138 143 EGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLP-GHLKVDFGDITALEKIFKES 221 (470)
Q Consensus 143 eA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~Le~~l~~~ 221 (470)
+++..+++++.. +|+ .|++..|+|......+...+... .. .+..+ +.+.+ |+++|++++++.
T Consensus 765 elL~lll~aLl~---------pGD-~VLVp~PtY~~Y~~~a~~~Ga~v-v~---Vpl~~e~gf~l---D~d~Le~al~~~ 827 (1082)
T PLN02672 765 ALFNKLVLCCVQ---------EGG-TLCFPAGSNGTYVSAAKFLKANF-RR---IPTKSSDGFKL---TAKTLASTLETV 827 (1082)
T ss_pred HHHHHHHHHHcC---------CCC-EEEEeCCChHHHHHHHHHcCCEE-EE---EecccccCCCC---CHHHHHHHhccC
Confidence 888888887754 455 88889999866554443332211 10 11111 11222 788999988642
Q ss_pred CCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcc---ccc----cC-CCCc--c---e
Q 012138 222 GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML---ASD----WE-EVRP--D---M 288 (470)
Q Consensus 222 ~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~---~~~----~~-~~~p--d---i 288 (470)
.+..+++++|.+||||.++ +.+.+++|.++|++||++||+||+|.++.+.+..+ .+. .+ ...+ . +
T Consensus 828 -~~~~I~L~nPnhNPTG~v~-S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL 905 (1082)
T PLN02672 828 -KKPWVYISGPTINPTGLLY-SNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALL 905 (1082)
T ss_pred -CCCEEEEECcCCCCcCccC-CHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEE
Confidence 1235666888449999999 99999999999999999999999999766554321 110 11 1011 1 2
Q ss_pred eecccccc-CCCcceeEEEec-HHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHh--h-------hhHHHHHHHHHHHH
Q 012138 289 VILGKALG-GGVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR--D-------EKLAERSAHLGEEL 357 (470)
Q Consensus 289 ~s~sK~l~-gG~~~ig~v~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~--~-------~~~~~~~~~~~~~l 357 (470)
.+|||.++ +|+ |+||++++ +++++.+....... ......+.++.+++..+. . .+.++.++++++++
T Consensus 906 ~SfSKkf~lpGL-RIGylIap~~eLi~~l~~~~~~s--~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L 982 (1082)
T PLN02672 906 GGLSTELLSGGH-EFGFLALNDSVLIDAFHSAPGLS--RPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERL 982 (1082)
T ss_pred eCcHHhhccHHH-HheeEEeCCHHHHHHHHHhhhhc--CCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHH
Confidence 38898877 898 99999985 45888775421111 112222333333332221 1 23344466666666
Q ss_pred HHHHHHHHhhCCCceEEEeccceeEEEEecc-----------C----CCchhHHHHHHHHHHc-CceeccCC----CCEE
Q 012138 358 RQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK-----------T----ALPVSAYDICLKMKER-GILAKPTH----DTIV 417 (470)
Q Consensus 358 ~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~-----------~----~~~~~~~~~~~~l~~~-Gv~~~~~~----~~~i 417 (470)
.+.|++. .+...++.|.|+.|.-.. . ....++.++++.|.++ ||.+.|+. ++++
T Consensus 983 ~e~L~~~------Gi~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~ 1056 (1082)
T PLN02672 983 KETLEAC------GWDVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYC 1056 (1082)
T ss_pred HHHHHHC------CCeEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeE
Confidence 6666653 245567888888774211 0 0012567899999877 99999863 5899
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 418 RLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 418 R~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
||+ +..+++++++++++|.++++
T Consensus 1057 RIs--fa~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1057 RFS--FALEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred EEE--ecCCHHHHHHHHHHHHHHHH
Confidence 999 55689999999999998775
No 186
>PRK08354 putative aminotransferase; Provisional
Probab=99.93 E-value=9.2e-24 Score=204.81 Aligned_cols=298 Identities=15% Similarity=0.134 Sum_probs=198.2
Q ss_pred CCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHH
Q 012138 74 GNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLAR 153 (470)
Q Consensus 74 G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~ 153 (470)
...+|||..+. +++ .+|.+.+++.+.++.... | +....+.++++++++ ++|++|+|+++|+..++.++
T Consensus 7 ~~~~i~l~~~~--np~--~p~~~~~a~~~~~~~~~~----y--p~~~~l~~~ia~~~~-~~I~vt~G~~~al~~~~~~~- 74 (311)
T PRK08354 7 EEGLIDFSASV--NPY--PPEWLDEMFERAKEISGR----Y--TYYEWLEEEFSKLFG-EPIVITAGITEALYLIGILA- 74 (311)
T ss_pred ccceeEecCCC--CCC--CCHHHHHHHHHHHHHhhc----C--CChHHHHHHHHHHHC-CCEEECCCHHHHHHHHHHhh-
Confidence 34588998774 333 358888988877654321 2 134678888888888 47999999999998776433
Q ss_pred HhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccc
Q 012138 154 KWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPI 233 (470)
Q Consensus 154 ~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi 233 (470)
. +|+ .|++.+|+|.+....+...+.+. ..++ .|++.|++.+++ ...+++++|
T Consensus 75 ~---------~gd-~vlv~~P~y~~~~~~~~~~g~~~-------------~~~~-~d~~~l~~~~~~---~~~vi~~~P- 126 (311)
T PRK08354 75 L---------RDR-KVIIPRHTYGEYERVARFFAARI-------------IKGP-NDPEKLEELVER---NSVVFFCNP- 126 (311)
T ss_pred C---------CCC-eEEEeCCCcHHHHHHHHHcCCEE-------------eecC-CCHHHHHHhhcC---CCEEEEecC-
Confidence 2 354 78889999876654443333221 1111 178889888763 334566788
Q ss_pred cCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecccccc-CCCcceeEEEecHHHH
Q 012138 234 QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPVSAVLADKEVM 312 (470)
Q Consensus 234 ~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~-gG~~~ig~v~~~~~~~ 312 (470)
+||||.++ +.+.+++|.++|++||+++|+||+|.+|...+... . .....-+.||||.++ +|+ |+||+++- .
T Consensus 127 ~NPTG~~~-~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~--~-~~~vi~~~S~SK~~~l~Gl-RiG~~v~~---~ 198 (311)
T PRK08354 127 NNPDGKFY-NFKELKPLLDAVEDRNALLILDEAFIDFVKKPESP--E-GENIIKLRTFTKSYGLPGI-RVGYVKGF---E 198 (311)
T ss_pred CCCCCCcc-CHHHHHHHHHHhhhcCcEEEEeCcchhcccccccc--C-CCcEEEEeccHhhcCCccc-eeeeeeeh---H
Confidence 99999999 99999999999999999999999999875543211 1 111123449999999 999 99999983 3
Q ss_pred hhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCc
Q 012138 313 LCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP 392 (470)
Q Consensus 313 ~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~ 392 (470)
+.++... ..+..+.++.+++.+.++ +. .+++++..+.+++..+.+... . ...+.|.|+++.+.
T Consensus 199 ~~l~~~~--~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~l~~~----l-~~~~~~~~~~~~~~----- 261 (311)
T PRK08354 199 EAFRSVR--MPWSIGSTGYAFLEFLIE----DD-FEHLRKTMPLIWREKERFEKA----L-YVKSDANFFIKDVG----- 261 (311)
T ss_pred HHHHHcC--CCccCCHHHHHHHHHHHH----hH-HHHHHHHHHHHHHHHHHHHHh----c-CCCCCCcEEEEECC-----
Confidence 4443222 234455566555544443 11 133344444444444443222 1 12467777776542
Q ss_pred hhHHHHHHHHHHcCceeccCC----CCEEEEecCCCCCHHHHHHHHHHHHHH
Q 012138 393 VSAYDICLKMKERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHDV 440 (470)
Q Consensus 393 ~~~~~~~~~l~~~Gv~~~~~~----~~~iR~~~~~~~t~e~i~~~~~~l~~~ 440 (470)
++.++++.|.++||.+.|+. ++++||+ ..+.++.+++++.|+++
T Consensus 262 -~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~---~~~~~~~~~l~~al~~~ 309 (311)
T PRK08354 262 -DAEKFVEFLKRNGILVRDCTSFGLPGYIRFS---VRDREENEKLIRALREW 309 (311)
T ss_pred -CHHHHHHHHHHCCeEEEecccCCCCCeEEEE---eCCHHHHHHHHHHHHHh
Confidence 35679999999999999874 4899999 34667788888888765
No 187
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.93 E-value=3.6e-24 Score=209.57 Aligned_cols=277 Identities=13% Similarity=0.068 Sum_probs=187.2
Q ss_pred CCCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcc
Q 012138 114 FYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 191 (470)
Q Consensus 114 ~~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~ 191 (470)
|+.+...+|.+.++++++ .++|++|+|+++++..++++ .. ++ .|++.+|+|......+...+..
T Consensus 37 Yp~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~~-~~---------~~--~vv~~~P~y~~y~~~~~~~G~~-- 102 (332)
T PRK06425 37 YPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLSY-IN---------VG--NIIIVEPNFNEYKGYAFTHGIR-- 102 (332)
T ss_pred CcCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHH-hC---------CC--cEEEeCCChHHHHHHHHHcCCe--
Confidence 445557889999998886 45799999999999998863 33 33 3555689997665544433322
Q ss_pred cccCCCCCCCCeeeecCC----CHHHHHHHHHhcCCCeEEEE-EccccCCCccccCChhhHHHHHHHHHhcCcEEEEecc
Q 012138 192 AIRGFGPLLPGHLKVDFG----DITALEKIFKESGDQIAGFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 266 (470)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~----d~~~Le~~l~~~~~~~~~vi-~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev 266 (470)
+..+|.+ |.+. ++.. ++++|+ ++| +||||.++ +.+.+++|.++|++||++||+||+
T Consensus 103 -----------v~~vp~~~~~~~~~~----l~~~--~~k~v~l~nP-~NPTG~~~-s~~~~~~l~~~a~~~~~~iI~DE~ 163 (332)
T PRK06425 103 -----------ISALPFNLINNNPEI----LNNY--NFDLIFIVSP-DNPLGNLI-SRDSLLTISEICRKKGALLFIDEA 163 (332)
T ss_pred -----------EEEEeCCcccCcHHH----Hhhc--CCCEEEEeCC-CCCcCCcc-CHHHHHHHHHHHHHcCCEEEEecc
Confidence 1222221 3333 3322 566666 555 99999999 899999999999999999999999
Q ss_pred ccCCcccCCcccccc---CCCCcceeecccccc-CCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHh
Q 012138 267 QSGLARSGRMLASDW---EEVRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR 342 (470)
Q Consensus 267 ~~g~g~~G~~~~~~~---~~~~pdi~s~sK~l~-gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~ 342 (470)
|..|...+....... .+...-+.||||.++ +|+ |+||+++++++++.+... ...++.+.++++++. ....-.
T Consensus 164 Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~Gl-RiGy~v~~~~li~~l~~~--~~~~~~~~~~~~~l~-~~~~~~ 239 (332)
T PRK06425 164 FIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSL-RIGYIATDDYNMKISRKI--TEPWSVCDPAIDFIR-SIDLDY 239 (332)
T ss_pred hhccccccchhHHHHhccCCCEEEEeecHHhcCCchh-hheeeecCHHHHHHHHHc--CCCCccCHHHHHHHH-HhhhHH
Confidence 998854432111111 111112349999999 999 999999999999888643 233444444333221 111100
Q ss_pred -hhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEE-eccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCC------C
Q 012138 343 -DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------D 414 (470)
Q Consensus 343 -~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------~ 414 (470)
.+..++.+++.++++.+.|++++ +... .+.|.|+++.++ +..++++.|.++||.+.|+. .
T Consensus 240 ~~~~~~~~~~~~r~~l~~~L~~~g------~~~~~~~~g~f~~~~~~------~~~~~~~~l~~~gi~v~~~~~f~~~~~ 307 (332)
T PRK06425 240 VAKHSLDIMENERSYLINNLEAMG------FRAAGDPSANFITFMIP------DAHDFYSYLLKNGILVRLLDDYECLGE 307 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCC------CEECCCCCceEEEEEcC------CHHHHHHHHHHCCeEEEECCCCCCCCC
Confidence 12456666777777777776641 3333 467888887654 35789999999999998762 4
Q ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 415 TIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 415 ~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
+++||+ ..+.++.++++++|++++.
T Consensus 308 ~~iRis---~~~~~~~~~l~~al~~~~~ 332 (332)
T PRK06425 308 QYIRIA---IRRRSFNIKLVNALRNFLN 332 (332)
T ss_pred CEEEEE---eCCHHHHHHHHHHHHHHhC
Confidence 699999 4578899999999998763
No 188
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=2.2e-24 Score=211.10 Aligned_cols=319 Identities=13% Similarity=0.085 Sum_probs=206.7
Q ss_pred eecCCEEEeCCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhC-----CCeEEe
Q 012138 63 QAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFG-----YDMVLP 137 (470)
Q Consensus 63 ~~~g~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-----~~~v~~ 137 (470)
++.|.+.+...|+..+|+..|... + ..+|.+.+++.+.+....+. .|+.....++.+.++++++ .++|++
T Consensus 7 ~~~~~~~~~~~~~~~i~l~~~~~~--~-~~p~~~~~~~~~~~~~~~~~--~Y~~~~~~~Lr~aia~~~~~~~~~~~~i~i 81 (335)
T PRK14808 7 IAKRAYPYETEKRDRTYLALNENP--F-PFPEDLVDEVFRRLNSDTLR--IYYDSPDEELIEKILSYLDTDFLSKNNVSV 81 (335)
T ss_pred hhccCcCCCCCCCceeEecCCCCC--C-CCCHHHHHHHHHHhhhhhhh--cCCCCChHHHHHHHHHHhCCCCCCcceEEE
Confidence 345666666778899999888533 3 27889999998876532111 1222234566666666654 578999
Q ss_pred cCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHH
Q 012138 138 MNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKI 217 (470)
Q Consensus 138 ~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~ 217 (470)
|+|+++++..+++.+ . .|++.+|+|.+....+...+..... .+...+ + .++.. .
T Consensus 82 t~Ga~~~i~~~~~~~-d-------------~v~v~~P~y~~~~~~~~~~g~~~~~----v~~~~~-----~-~~~~~--~ 135 (335)
T PRK14808 82 GNGADEIIYVMMLMF-D-------------RSVFFPPTYSCYRIFAKAVGAKFLE----VPLTKD-----L-RIPEV--N 135 (335)
T ss_pred cCCHHHHHHHHHHHh-C-------------cEEECCCCHHHHHHHHHHcCCeEEE----ecCCCc-----C-CCChh--H
Confidence 999999999988754 1 4778899997665544433322111 011000 0 11111 1
Q ss_pred HHhcCCCeEEEE-EccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccc-cccCCCCcceeeccccc
Q 012138 218 FKESGDQIAGFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEEVRPDMVILGKAL 295 (470)
Q Consensus 218 l~~~~~~~~~vi-~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~-~~~~~~~pdi~s~sK~l 295 (470)
+. ++++++ ++| +||||.++ +++.+++| + +++++||+||+|..|. ...... ........-+.||||.+
T Consensus 136 ~~----~~~~i~i~nP-~NPTG~~~-s~~~l~~l---~-~~~~~ii~DE~Y~~f~-~~~~~~~~~~~~~vi~~~S~SK~~ 204 (335)
T PRK14808 136 VG----EGDVVFIPNP-NNPTGHVF-EREEIERI---L-KTGAFVALDEAYYEFH-GESYVDLLKKYENLAVIRTFSKAF 204 (335)
T ss_pred cc----CCCEEEEeCC-CCCCCCCc-CHHHHHHH---H-hcCCEEEEECchhhhc-CCchHHHHHhCCCEEEEEechhhc
Confidence 21 345555 555 99999999 65555554 4 4799999999999873 111111 11121122344999999
Q ss_pred c-CCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHhhCCCceE
Q 012138 296 G-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVK 373 (470)
Q Consensus 296 ~-gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~ 373 (470)
+ +|+ |+||+++++++++.+.... ..++.+.+++.++.++++..+. ++..+.+++..+++.+.|+++ .+.
T Consensus 205 ~l~Gl-RvG~~v~~~~~~~~l~~~~--~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~------g~~ 275 (335)
T PRK14808 205 SLAAQ-RIGYVVSSEKFIDAYNRVR--LPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM------GYR 275 (335)
T ss_pred cCccc-ceEEEEeCHHHHHHHHHhc--CCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC------CCE
Confidence 9 899 9999999999998886433 3466778888888777763221 223344445555566666553 234
Q ss_pred EEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHH
Q 012138 374 EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDV 440 (470)
Q Consensus 374 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~ 440 (470)
...+.|.|+++.+... +..++.++|.++||++... .+++|++ ..+.++.+++++.|+++
T Consensus 276 ~~~~~g~f~~~~l~~~----~~~~~~~~l~~~Gi~V~~~-~~~~Ris---i~~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 276 ITDSRGNFVFIFMEKE----EKERLLEHLRAKNIAVRSF-REGVRIT---IGKREENDMILKELEVF 334 (335)
T ss_pred ECCCCCeEEEEeCCCc----cHHHHHHHHHHCCeEEEEC-CCCeEEe---cCCHHHHHHHHHHHHhh
Confidence 4467888988876532 4578999999999999865 4789999 46788999999998753
No 189
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.93 E-value=2.3e-23 Score=209.39 Aligned_cols=329 Identities=14% Similarity=0.173 Sum_probs=215.7
Q ss_pred CCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCC-------CCcHHHHHHHHhhhhCC---CeEEecCChhH
Q 012138 74 GNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFY-------NDKFPVFAERLTSMFGY---DMVLPMNTGAE 143 (470)
Q Consensus 74 G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~-------~~~~~~l~~~l~~~~~~---~~v~~~~sGte 143 (470)
+..|+|..+. |..++.+.+++.+.++.....+.... .+..+++.+.++++++. +.|++|+|+++
T Consensus 16 ~~iyld~a~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~ 89 (398)
T TIGR03392 16 GTVYLDSAAT------ALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTE 89 (398)
T ss_pred CeEEeeCccc------cCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHH
Confidence 4567776544 23568899999888764322211111 12345677888888864 47999999999
Q ss_pred HHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchh---cccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHh
Q 012138 144 GVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAI---SMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKE 220 (470)
Q Consensus 144 A~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~ 220 (470)
++..++..+... ...+|+ .||+.++.|++...... ...+.... +.+...+ ..+ |++++++++++
T Consensus 90 ~l~~~~~~~~~~-----~~~~gd-~Vl~~~~~~~s~~~~~~~~~~~~g~~v~---~v~~~~~-~~~---~~~~l~~~i~~ 156 (398)
T TIGR03392 90 SINLVAQSYARP-----RLQPGD-EIIVSEAEHHANLIPWLMVAQQTGAKVV---KLPIGAD-LLP---DIRQLPELLTP 156 (398)
T ss_pred HHHHHHHHhhhc-----cCCCCC-EEEECCcchhHHHHHHHHHHHHcCcEEE---EEecCCC-CCc---CHHHHHHHhcc
Confidence 999998865310 001455 78888888665321111 11111110 1111111 111 78999998875
Q ss_pred cCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecc--ccccCC
Q 012138 221 SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGGG 298 (470)
Q Consensus 221 ~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~s--K~l~gG 298 (470)
++++|++..++||+|.+.| +++|.++|++||+++|+|++|+ ++.. ..... ...+|+.++| |.+++
T Consensus 157 ---~t~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~~~~--~~~~~--~~~~d~~~~s~~K~~gp- 223 (398)
T TIGR03392 157 ---RTRILALGQMSNVTGGCPD----LARAITLAHQYGAVVVVDGAQG-VVHG--PPDVQ--ALDIDFYAFSGHKLYGP- 223 (398)
T ss_pred ---CceEEEEECccccccccCC----HHHHHHHHHHcCCEEEEEhhhh-cCCC--CCChh--hcCCCEEEEecccccCC-
Confidence 7888887778999999998 9999999999999999999997 2111 11122 2345887777 96653
Q ss_pred CcceeEEEecHHHHhhcCcCCccC------------------CC---CCCHHHHHHHHHHHHHHhh---hhHHHHHHHHH
Q 012138 299 VIPVSAVLADKEVMLCIQPGEHGS------------------TF---GGNPLASAVAIASLDVIRD---EKLAERSAHLG 354 (470)
Q Consensus 299 ~~~ig~v~~~~~~~~~~~~~~~~~------------------t~---~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~ 354 (470)
. ++|++++++++++.+.+...+. .| +.+..+.+++.++++.+.+ +.+.++.+++.
T Consensus 224 ~-G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~ 302 (398)
T TIGR03392 224 T-GIGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLA 302 (398)
T ss_pred C-ceEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 3 6899999999887775432111 11 3566677788888887755 34556666666
Q ss_pred HHHHHHHHHHHhhCCCceEEE-eccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCC------------CCEEEEec
Q 012138 355 EELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------------DTIVRLTP 421 (470)
Q Consensus 355 ~~l~~~L~~l~~~~p~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------------~~~iR~~~ 421 (470)
+++.+.|.++ | .+... ...+.++.+.+.. .+..++.+.|.++||.+.++. .+++|+++
T Consensus 303 ~~l~~~l~~l----~-g~~~~~~~~~~i~~~~~~~----~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~ 373 (398)
T TIGR03392 303 DLAEERLAQL----P-GFRSFRCPGSSLLAFDFAG----VHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASF 373 (398)
T ss_pred HHHHHHHhcC----C-CeEEeCCCCCcEEEEEeCC----cCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEe
Confidence 6666666553 2 22222 2334556655542 256789999999999997653 46899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhccc
Q 012138 422 PLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 422 ~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
...+|++|++++++.|+++++ ++
T Consensus 374 ~~~~t~~ei~~l~~~l~~~~~-~~ 396 (398)
T TIGR03392 374 APYNTQQDVDALVDAVGAALE-LL 396 (398)
T ss_pred eccCCHHHHHHHHHHHHHHHH-Hh
Confidence 999999999999999999887 54
No 190
>PRK09265 aminotransferase AlaT; Validated
Probab=99.93 E-value=1.3e-23 Score=211.45 Aligned_cols=340 Identities=14% Similarity=0.094 Sum_probs=208.7
Q ss_pred CCCeEEeccCCcccccCC-CCCHHHHHHHHHHHHHccccC-CCCCCCcHHHHHHHHhhhh----CCCeEEecCChhHHHH
Q 012138 73 EGNKYLDFLSAYSAVNQG-HCHPKIMKALQEQAEKLTLSS-RAFYNDKFPVFAERLTSMF----GYDMVLPMNTGAEGVE 146 (470)
Q Consensus 73 ~G~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~----~~~~v~~~~sGteA~~ 146 (470)
.|+.++||..|... +++ ..++++.+++.+.+.....++ .....++++.+++++.... ..++|++++|+++++.
T Consensus 31 ~~~~~i~l~~g~p~-~~~~~~~~~i~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~ 109 (404)
T PRK09265 31 EGHKILKLNIGNPA-PFGFEAPDEILRDVIRNLPTAQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIV 109 (404)
T ss_pred cCCCeEEecCCCCC-cCCCCCCHHHHHHHHHHhhcCCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHHH
Confidence 45677888876442 223 257788888887665422111 1112334555555554321 2467999999999999
Q ss_pred HHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCC-CeeeecCCCHHHHHHHHHhcCCCe
Q 012138 147 TALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLP-GHLKVDFGDITALEKIFKESGDQI 225 (470)
Q Consensus 147 ~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~Le~~l~~~~~~~ 225 (470)
.+++.+.. +|+ .|++.+++|..........+..... . +... +...+ |++++++.++. ++
T Consensus 110 ~~~~~~~~---------~gd-~Vlv~~p~y~~~~~~~~~~g~~~v~-~---~~~~~~~~~~---d~~~l~~~~~~---~~ 169 (404)
T PRK09265 110 MAMQALLN---------NGD-EVLVPAPDYPLWTAAVSLSGGKPVH-Y---LCDEEAGWFP---DLDDIRSKITP---RT 169 (404)
T ss_pred HHHHHhCC---------CCC-EEEEeCCCCcChHHHHHHcCCEEEE-E---ecccccCCCC---CHHHHHHhccc---cc
Confidence 99887644 455 7888899986544333222221110 0 0000 01112 78999988865 67
Q ss_pred EEEE-EccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCc-cccccC-C-C-Ccceeecccccc-CCC
Q 012138 226 AGFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDWE-E-V-RPDMVILGKALG-GGV 299 (470)
Q Consensus 226 ~~vi-~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~-~~~~~~-~-~-~pdi~s~sK~l~-gG~ 299 (470)
++|+ ++| +||||.++ +.+.+++|.++|++||++||+||+|.+|.+.+.. ...... . . ..-+-+|||.++ +|+
T Consensus 170 ~~v~l~~P-~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGl 247 (404)
T PRK09265 170 KAIVIINP-NNPTGAVY-SKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGF 247 (404)
T ss_pred eEEEEECC-CCCCCcCC-CHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCccc
Confidence 7666 555 99999999 8999999999999999999999999987554422 111111 1 0 112347899995 898
Q ss_pred cceeEEEe--cHH----HHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh-hhHH---HHHHHHHHHHHHHHHHHHhhCC
Q 012138 300 IPVSAVLA--DKE----VMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLA---ERSAHLGEELRQHLFKIQQQFP 369 (470)
Q Consensus 300 ~~ig~v~~--~~~----~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~-~~~~---~~~~~~~~~l~~~L~~l~~~~p 369 (470)
|+||+++ +++ +++.+... ...+++.+.+++.++.++|...+. ..+. +++++.++.+.+.|++ +|
T Consensus 248 -RiG~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~----~~ 321 (404)
T PRK09265 248 -RVGWMVLSGPKKHAKGYIEGLDML-ASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNA----IP 321 (404)
T ss_pred -ceEEEEEeCchHHHHHHHHHHHHH-hccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhc----CC
Confidence 9999995 343 33333211 123456777888888777742211 1122 2344444555555543 33
Q ss_pred CceEEEeccceeEEE-EeccCCC--chhHHHHHHHHHHcCceeccCC------CCEEEEecCCCCCHHHHHHHHHHHHHH
Q 012138 370 NYVKEVRGRGLFNAV-EFDKTAL--PVSAYDICLKMKERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDV 440 (470)
Q Consensus 370 ~~~~~~~~~g~~~~~-~~~~~~~--~~~~~~~~~~l~~~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~~~ 440 (470)
.+....+.|.++.| .++.... ..+...+.+.|.++||.+.|+. .+++|++. ..++|++++++++|.++
T Consensus 322 -~~~~~~p~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~--~~~~e~l~~~l~rl~~~ 398 (404)
T PRK09265 322 -GVSCVKPKGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVT--LPRVDDLEEAIGRIGRF 398 (404)
T ss_pred -CCcccCCCcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEe--CCCHHHHHHHHHHHHHH
Confidence 34444555554444 5543110 0134456777888899998762 57999995 57899999999999999
Q ss_pred Hhccc
Q 012138 441 LELDL 445 (470)
Q Consensus 441 l~~~~ 445 (470)
++ ..
T Consensus 399 l~-~~ 402 (404)
T PRK09265 399 LS-GY 402 (404)
T ss_pred HH-Hh
Confidence 87 54
No 191
>PLN02231 alanine transaminase
Probab=99.93 E-value=7e-24 Score=217.86 Aligned_cols=326 Identities=11% Similarity=0.100 Sum_probs=211.6
Q ss_pred CHHHHHHHHHHHHHcc------ccCCCCCCCcHHHHHHHHhhhhC----CCeEEecCChhHHHHHHHHHHHHhchhcccC
Q 012138 93 HPKIMKALQEQAEKLT------LSSRAFYNDKFPVFAERLTSMFG----YDMVLPMNTGAEGVETALKLARKWGYVKKKF 162 (470)
Q Consensus 93 ~p~v~~a~~~~~~~~~------~~~~~~~~~~~~~l~~~l~~~~~----~~~v~~~~sGteA~~~al~~~~~~~~~~~~~ 162 (470)
+.++++.+.+.+.... ++......++++.+++++.+..| .++|++|+|+++|+..+++++...
T Consensus 142 p~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~------- 214 (534)
T PLN02231 142 SADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------- 214 (534)
T ss_pred CHHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccC-------
Confidence 3466666666665421 11122234567777777766544 478999999999999999987531
Q ss_pred CCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCC-eeeecCCCHHHHHHHHHhcC---CCeEEEE-EccccCCC
Q 012138 163 SIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-HLKVDFGDITALEKIFKESG---DQIAGFL-FEPIQGEA 237 (470)
Q Consensus 163 ~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~Le~~l~~~~---~~~~~vi-~epi~n~~ 237 (470)
+|+ .|++..|+|.+........+..... .++.++ .+.+ |+++|++++++.. .++++++ ++| +|||
T Consensus 215 -~gd-~Vli~~P~Y~~y~~~~~~~g~~~v~----~~l~~~~~~~~---d~~~Le~~l~~~~~~~~~~k~ivl~nP-~NPT 284 (534)
T PLN02231 215 -EKD-GILCPIPQYPLYSASIALHGGTLVP----YYLDEATGWGL---EISELKKQLEDARSKGITVRALVVINP-GNPT 284 (534)
T ss_pred -CCC-EEEEeCCCChhHHHHHHHcCCEEEE----EecCcccCCCC---CHHHHHHHHHHHhhcCCCeEEEEEeCC-CCCC
Confidence 344 8889999997665444333322111 011111 1223 8999999987531 2567655 666 9999
Q ss_pred ccccCChhhHHHHHHHHHhcCcEEEEeccccCCccc-CCcc-ccccC----CC---Cccee---ecccccc--CCCccee
Q 012138 238 GVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS-GRML-ASDWE----EV---RPDMV---ILGKALG--GGVIPVS 303 (470)
Q Consensus 238 G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~-G~~~-~~~~~----~~---~pdi~---s~sK~l~--gG~~~ig 303 (470)
|.++ +.+.+++|+++|++||++||+||+|..+.+. +..+ .+... +. ...++ +|||.+. +|+ |+|
T Consensus 285 G~vl-s~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGl-RiG 362 (534)
T PLN02231 285 GQVL-AEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGK-RGG 362 (534)
T ss_pred CcCC-CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCcc-ceE
Confidence 9999 9999999999999999999999999987653 3221 21111 11 11233 8899874 699 999
Q ss_pred EEEe---cHHHHhhcCcCCccCCCCCCHHHHHHHHHHHH-------HHh----h-hhHHHHHHHHHHHHHHHHHHHHhhC
Q 012138 304 AVLA---DKEVMLCIQPGEHGSTFGGNPLASAVAIASLD-------VIR----D-EKLAERSAHLGEELRQHLFKIQQQF 368 (470)
Q Consensus 304 ~v~~---~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~-------~~~----~-~~~~~~~~~~~~~l~~~L~~l~~~~ 368 (470)
|+++ ++++++.+..... ...+.+.++++++..+++ .+. + +.+++.++++.+.+.+.|+++
T Consensus 363 y~~~~~~~~~l~~~l~k~~~-~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~---- 437 (534)
T PLN02231 363 YMEVTGFTSDVREQIYKVAS-VNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSL---- 437 (534)
T ss_pred EEEEecCCHHHHHHHHHHHh-hhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----
Confidence 9986 6888887754322 234456666776666553 111 1 234556666777777766653
Q ss_pred CCceEEEeccceeEEE-EeccCCC---------chhHHHHHHHHHH-cCceeccCC-------CCEEEEecCCCCCHHHH
Q 012138 369 PNYVKEVRGRGLFNAV-EFDKTAL---------PVSAYDICLKMKE-RGILAKPTH-------DTIVRLTPPLSISSNEL 430 (470)
Q Consensus 369 p~~~~~~~~~g~~~~~-~~~~~~~---------~~~~~~~~~~l~~-~Gv~~~~~~-------~~~iR~~~~~~~t~e~i 430 (470)
+ .+....+.|.|+.| .+..+.. ......++.+|++ .||.+.|+. ..++|++ +..+++++
T Consensus 438 ~-gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit--~~~~~e~l 514 (534)
T PLN02231 438 E-GVTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCT--ILPQEDKI 514 (534)
T ss_pred C-CceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEE--eCCCHHHH
Confidence 2 46666788888888 2221110 0013346676664 599999873 3469999 56899999
Q ss_pred HHHHHHHHHHHhcccC
Q 012138 431 QEGSKALHDVLELDLP 446 (470)
Q Consensus 431 ~~~~~~l~~~l~~~~~ 446 (470)
++++++|.++++ ++.
T Consensus 515 ~eal~RL~~~~~-~~~ 529 (534)
T PLN02231 515 PAIVSRLTEFHK-SFM 529 (534)
T ss_pred HHHHHHHHHHHH-HHH
Confidence 999999999987 654
No 192
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.93 E-value=4.9e-24 Score=214.40 Aligned_cols=320 Identities=16% Similarity=0.118 Sum_probs=207.5
Q ss_pred CcccccCCCCCHHHHHHHHHHHHHcc--ccC-----CCCCCCcHHHHHHHHhhhhCCC--eEEecCChhHHHHHHHHHHH
Q 012138 83 AYSAVNQGHCHPKIMKALQEQAEKLT--LSS-----RAFYNDKFPVFAERLTSMFGYD--MVLPMNTGAEGVETALKLAR 153 (470)
Q Consensus 83 ~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~-----~~~~~~~~~~l~~~l~~~~~~~--~v~~~~sGteA~~~al~~~~ 153 (470)
+.+....||++|++++++..++ ... +.+ .....+++.++++++++++|.+ .++++++|+++.+.++.+++
T Consensus 24 ~l~~g~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~~ 102 (398)
T cd00613 24 FLGSGTYKHNPPAVIKRNILEN-EFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAAI 102 (398)
T ss_pred cccccccCCcCcHHHHHHhccc-cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHHH
Confidence 3344457899999998877666 221 111 1112345788999999998865 78788877777677766554
Q ss_pred HhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCC-----CHHHHHHHHHhcCCCeEEE
Q 012138 154 KWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG-----DITALEKIFKESGDQIAGF 228 (470)
Q Consensus 154 ~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~Le~~l~~~~~~~~~v 228 (470)
.. . + +++ .|++.++ +|+.+...+...+...- ..+..++++ |++++++++.+ ++++|
T Consensus 103 ~~--~--~--~gd-~Vl~~~~-~h~~~~~~~~~~~~~~g--------~~~~~v~~~~~~~~d~~~l~~~i~~---~t~~v 163 (398)
T cd00613 103 RA--Y--H--KRN-KVLVPDS-AHPTNPAVARTRGEPLG--------IEVVEVPSDEGGTVDLEALKEEVSE---EVAAL 163 (398)
T ss_pred hc--c--c--CCC-EEEEcCc-cCcchHHHHHHhcccCC--------cEEEEeccCCCCCcCHHHHHHhcCC---CeEEE
Confidence 31 0 0 133 5555544 68887766655442100 011222221 78999988865 79999
Q ss_pred EEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCccee--ecccccc----CCCcce
Q 012138 229 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALG----GGVIPV 302 (470)
Q Consensus 229 i~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~--s~sK~l~----gG~~~i 302 (470)
+++++ +++|.+.+ ++++|.++|++||+++|+|++|+.....+. ...+ .+|++ +++|.+. ||. ++
T Consensus 164 iv~~~-~~~G~~~~---~l~~i~~la~~~g~~livD~~~~~~~~~~~---~~~~--~~d~~~~s~~K~~~p~g~Ggp-~~ 233 (398)
T cd00613 164 MVQYP-NTLGVFED---LIKEIADIAHSAGALVYVDGDNLNLTGLKP---PGEY--GADIVVGNLQKTGVPHGGGGP-GA 233 (398)
T ss_pred EEECC-CCCceecc---hHHHHHHHHHhcCCEEEEEeccccccCCCC---hHHc--CCCEEEeeccccCCCCCCCCC-ce
Confidence 99885 58998853 469999999999999999999863211111 1122 35765 5678763 366 88
Q ss_pred eEEEecHHHHhhcCcC-----------------------------CccCCCCCCHHHHHHHHHHHHHHhh---hhHHHHH
Q 012138 303 SAVLADKEVMLCIQPG-----------------------------EHGSTFGGNPLASAVAIASLDVIRD---EKLAERS 350 (470)
Q Consensus 303 g~v~~~~~~~~~~~~~-----------------------------~~~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~ 350 (470)
|+++.++++++.+.+. ...++++++++.++++.++++.+.+ +++.++.
T Consensus 234 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~ 313 (398)
T cd00613 234 GFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERA 313 (398)
T ss_pred eEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 9999998888765321 1123455667777777777776654 3466888
Q ss_pred HHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccC---CCCEEEEecCCCCCH
Q 012138 351 AHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT---HDTIVRLTPPLSISS 427 (470)
Q Consensus 351 ~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---~~~~iR~~~~~~~t~ 427 (470)
+++++++++.|+++....+ .. ......+.+.+.... +.++.++++.|.++||.+... ..+.+|++|++.+|+
T Consensus 314 ~~~~~~l~~~L~~~~~~~~--~~--~~~~~~v~~~~~~~~-~~~~~~~~~~L~~~gi~~~~~~~~~~~~lRis~~~~~t~ 388 (398)
T cd00613 314 HLNANYLAKRLKEVGGVLP--FN--GPFFHEFVLRLPPLY-GIRAEDLAKALIDGGFHAPTMYLPVDGTLMIEPTETETK 388 (398)
T ss_pred HHHHHHHHHHHHhcCCccc--CC--CCeeEEEEEEcCCcc-hHHHHHHHHhhhhcCccccccccCCCCeEEEEcCCCCCH
Confidence 8999999999988642210 00 011112233333210 136788999999999987653 568999999999999
Q ss_pred HHHHHHHHHH
Q 012138 428 NELQEGSKAL 437 (470)
Q Consensus 428 e~i~~~~~~l 437 (470)
|||+++++.|
T Consensus 389 edid~~~~~L 398 (398)
T cd00613 389 EELDALLEAL 398 (398)
T ss_pred HHHHHHHHhC
Confidence 9999999864
No 193
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.93 E-value=1.1e-23 Score=209.11 Aligned_cols=291 Identities=14% Similarity=0.098 Sum_probs=192.7
Q ss_pred CcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCC
Q 012138 117 DKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGF 196 (470)
Q Consensus 117 ~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 196 (470)
+...++.+.+++++|.+.+++++||++++..++..+.. +++ .|++..+.+ ......+...+..
T Consensus 51 ~~~~~~~e~lA~~~g~~~~~i~~g~~~a~~~~~~~l~~---------~gd-~Vl~~~~~h-~s~~~~~~~~g~~------ 113 (370)
T TIGR02539 51 PPIHDFLEDLAEFLGMDEARVTHGAREGKFAVMHALCK---------EGD-WVVLDGLAH-YTSYVAAERAGLN------ 113 (370)
T ss_pred hHHHHHHHHHHHHhCCCceEEECChHHHHHHHHHHhhC---------CCC-EEEECCccc-HHHHHHHHHcCCE------
Confidence 35677888899999999999999999999999887754 455 676666663 3333333333221
Q ss_pred CCCCCCeeeecCC-------CHHHHHHHHHhc----CCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEec
Q 012138 197 GPLLPGHLKVDFG-------DITALEKIFKES----GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 265 (470)
Q Consensus 197 ~~~~~~~~~~~~~-------d~~~Le~~l~~~----~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~De 265 (470)
+..++++ |+++|++++++. ..++++|+++.++|++|.+.| +++|.++|++||+++|+||
T Consensus 114 ------~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~----l~~i~~la~~~~~~livDe 183 (370)
T TIGR02539 114 ------VKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD----AGKVAKVCREKGVPLLLNC 183 (370)
T ss_pred ------EEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC----HHHHHHHHHHcCCeEEEEC
Confidence 2334443 899999998642 125678887767999999998 9999999999999999999
Q ss_pred cccCCcccCCccccccCCCCcce--eeccccccCCCcceeEEEecHHHHhhcCcCCccCCC--------CCCHHHHHHHH
Q 012138 266 IQSGLARSGRMLASDWEEVRPDM--VILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTF--------GGNPLASAVAI 335 (470)
Q Consensus 266 v~~g~g~~G~~~~~~~~~~~pdi--~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~--------~~~~~~~aaa~ 335 (470)
+|+. |..+.. ...+ .+|+ .+++|++++|. |+|++++++++++.+........+ +....+++++.
T Consensus 184 a~~~-g~~~~~--~~~~--~~di~v~s~sK~~~~~g-~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (370)
T TIGR02539 184 AYTV-GRMPVS--AKEI--GADFIVGSGHKSMAASG-PCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMM 257 (370)
T ss_pred cccc-CCcCCC--HHHc--CCCEEEeeCcccccCCC-CEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHH
Confidence 9982 211111 1112 2354 48999999766 999999999999988754321111 11112455555
Q ss_pred HHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCC-----CchhHHHHHHHHHHcCce-
Q 012138 336 ASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-----LPVSAYDICLKMKERGIL- 408 (470)
Q Consensus 336 a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~~~~~l~~~Gv~- 408 (470)
++++...+ -....+..++.+++++.|++++-. .+....+...++.+.++... .......+.+.|+++||.
T Consensus 258 ~al~~~~~~l~~~~~~~~~~~~l~~~L~~~g~~---~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ 334 (370)
T TIGR02539 258 ASFPHVVERVKRWDEEVKKTRWFVAELEDIGFI---QLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHG 334 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcE---EEccCCCcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCcc
Confidence 56654322 111222233356788888775321 11112345556666543110 001345789999999998
Q ss_pred eccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 409 AKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 409 ~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
+.++.++++|++. ..++++++++++++|+++++ ++
T Consensus 335 ir~~~~~~iRis~-~~~t~e~i~~l~~~L~~~~~-~~ 369 (370)
T TIGR02539 335 IRSGQTKYFKLSV-YGLTKEQVEYVVDSFEEIVE-EY 369 (370)
T ss_pred ccCCcceEEEEEe-cCCCHHHHHHHHHHHHHHHH-hc
Confidence 7776667999997 36899999999999999987 64
No 194
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=7.4e-24 Score=210.67 Aligned_cols=322 Identities=20% Similarity=0.198 Sum_probs=209.8
Q ss_pred CCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCC--CeEEecCChhHHHHHHHHH
Q 012138 74 GNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGY--DMVLPMNTGAEGVETALKL 151 (470)
Q Consensus 74 G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~v~~~~sGteA~~~al~~ 151 (470)
+..++||..+... ++ .++.+.+++.+....... |....-.++.+.++++++. ++|++|+|+++++..++++
T Consensus 35 ~~~~i~l~~~~~~--~~-~~~~~~~al~~~~~~~~~----Y~~~~g~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~ 107 (371)
T PRK05166 35 VPRIAKLGSNENP--LG-PSPAVRRAFADIAELLRL----YPDPQGRALREAIAARTGVPADRIILGNGSEDLIAVICRA 107 (371)
T ss_pred CcceEEcCCCCCC--CC-CCHHHHHHHHHHHHHhhc----CCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHH
Confidence 3468899888543 44 678888888775544322 2222224677888887764 5799999999999988887
Q ss_pred HHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEc
Q 012138 152 ARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFE 231 (470)
Q Consensus 152 ~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~e 231 (470)
+.+ +|+ .|++..|+|.+........+. ... ..+...+ ..+ |++++++.+++ ++++|++.
T Consensus 108 ~~~---------~gd-~vli~~P~y~~~~~~~~~~g~-~~~---~v~~~~~-~~~---~~~~l~~~~~~---~~~~v~l~ 166 (371)
T PRK05166 108 VLR---------PGD-RVVTLYPSFPLHEDYPTMMGA-RVE---RVTVTPD-LGF---DLDALCAAVAR---APRMLMFS 166 (371)
T ss_pred hcC---------CCC-EEEEcCCChHHHHHHHHHcCC-eEE---EeecCCC-CCC---CHHHHHHhhhc---CCCEEEEe
Confidence 654 455 777888998654322221111 110 0111000 112 78999988875 55666654
Q ss_pred cccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccc-cccC-CCCc---ceeecccccc-CCCcceeEE
Q 012138 232 PIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWE-EVRP---DMVILGKALG-GGVIPVSAV 305 (470)
Q Consensus 232 pi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~-~~~~-~~~p---di~s~sK~l~-gG~~~ig~v 305 (470)
.++||||.++ +.+.+++|.++|++ ++++|+||+|..|...+.... .... ...+ -+.||||.++ +|+ |+||+
T Consensus 167 ~p~NPtG~~~-~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~Gl-RiG~~ 243 (371)
T PRK05166 167 NPSNPVGSWL-TADQLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGL-RVGYG 243 (371)
T ss_pred CCCCCCCCCC-CHHHHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchh-heeee
Confidence 4599999999 88889999998875 889999999997753322111 1111 1111 2348999999 998 99997
Q ss_pred Ee-cHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEE
Q 012138 306 LA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNA 383 (470)
Q Consensus 306 ~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~ 383 (470)
++ ++++++.+.... ..++.+.+++.++.+++..-.. ++..+.++++++++.+.|++. + +...++.|.|++
T Consensus 244 i~~~~~l~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~----g--~~~~p~~g~fl~ 315 (371)
T PRK05166 244 LVSDPELVGLLDRVR--TPFNVNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEM----G--YRIAPSRANFLF 315 (371)
T ss_pred ecCCHHHHHHHHHhc--cCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC----c--CeeCCCcCCEEE
Confidence 75 788887775322 3456788888777776642111 233445555566666666653 1 233455677766
Q ss_pred EEeccCCCchhHHHHHHHHHHcCceeccCC----CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 384 VEFDKTALPVSAYDICLKMKERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~----~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
+.+. . +..++++.|.++||.+.|+. .+++||++ .+.++.+++++.|++++.
T Consensus 316 ~~~~--~---~~~~l~~~l~~~gi~v~p~~~~~~~~~iRi~~---~~~~~~~~l~~~l~~i~~ 370 (371)
T PRK05166 316 FDAR--R---PASAVAEALLRQGVIVKPWKQPGFETFIRVSI---GSPEENDHFVAALDKVLE 370 (371)
T ss_pred EeCC--C---CHHHHHHHHHHCCeEEecCCCCCCCCeEEEEc---CCHHHHHHHHHHHHHHhh
Confidence 5432 2 46789999999999998763 67899994 367778888888887654
No 195
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.93 E-value=5.2e-24 Score=213.65 Aligned_cols=336 Identities=12% Similarity=0.044 Sum_probs=206.5
Q ss_pred eEEeccCCcccccCCCCC--HHHHHHHHHHHHHc---cccCCCCCCCcHHHHHHHHhhhh----CCCeE--EecCChhHH
Q 012138 76 KYLDFLSAYSAVNQGHCH--PKIMKALQEQAEKL---TLSSRAFYNDKFPVFAERLTSMF----GYDMV--LPMNTGAEG 144 (470)
Q Consensus 76 ~~lD~~~~~~~~~lG~~~--p~v~~a~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~----~~~~v--~~~~sGteA 144 (470)
..|||..|....+.++.+ +.+.+++.+.++.. .+.+.....++++.+++++.+.. ..+++ ++|+|+++|
T Consensus 27 ~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~a 106 (396)
T PRK09257 27 DKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGA 106 (396)
T ss_pred CcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHH
Confidence 457888886543433333 67778877766432 12222334456677777765543 24566 999999999
Q ss_pred HHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCC-CCCeeeecCCCHHHHHHHHHhcCC
Q 012138 145 VETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPL-LPGHLKVDFGDITALEKIFKESGD 223 (470)
Q Consensus 145 ~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~Le~~l~~~~~ 223 (470)
+..+++++... .+|+ .|++.+|+|.+........+..... .+. .++...+ |+++++++++++..
T Consensus 107 l~~~~~~l~~~-------~pGd-~Vlv~~P~y~~~~~~~~~~g~~~v~----v~~~~~~~~~~---d~~~l~~~~~~~~~ 171 (396)
T PRK09257 107 LRVGADFLKRA-------FPDA-KVWVSDPTWPNHRAIFEAAGLEVKT----YPYYDAATKGL---DFDAMLADLSQAPA 171 (396)
T ss_pred HHHHHHHHHHh-------CCCC-eEEECCCCcccHHHHHHHcCCcEEE----EeccccccCcc---CHHHHHHHHHhCCC
Confidence 99998755321 0455 8999999997765544433332111 011 0111122 88999998875433
Q ss_pred CeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCccc-CC-cc---ccccC-CCCcceeecccccc-
Q 012138 224 QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS-GR-ML---ASDWE-EVRPDMVILGKALG- 296 (470)
Q Consensus 224 ~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~-G~-~~---~~~~~-~~~pdi~s~sK~l~- 296 (470)
+++++++...|||||.++ +.+.+++|.++|++||+++|+||+|.+|... +. .. .+... ....-+.||||.++
T Consensus 172 ~~~~~i~~~p~NPTG~~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~ 250 (396)
T PRK09257 172 GDVVLLHGCCHNPTGADL-TPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGL 250 (396)
T ss_pred CCEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCcc
Confidence 445555455699999999 9999999999999999999999999987643 11 11 11111 11123459999999
Q ss_pred CCCcceeEEEe---cHH----HHhhcCcCCccCCCCCCHHHHHHHHHHHHHH------hh--hhHHHHHHHHHHHHHHHH
Q 012138 297 GGVIPVSAVLA---DKE----VMLCIQPGEHGSTFGGNPLASAVAIASLDVI------RD--EKLAERSAHLGEELRQHL 361 (470)
Q Consensus 297 gG~~~ig~v~~---~~~----~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~------~~--~~~~~~~~~~~~~l~~~L 361 (470)
+|+ |+||+++ +++ ++..+.........+.+.+.+.++...++.- .+ +.++++++++++.+.+.|
T Consensus 251 ~Gl-RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L 329 (396)
T PRK09257 251 YGE-RVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEAL 329 (396)
T ss_pred ccc-cceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 599 9999973 433 3333322222223335677766666555421 11 234556666666666666
Q ss_pred HHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 012138 362 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 441 (470)
Q Consensus 362 ~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l 441 (470)
+++... ..+....+.|.|+.| +.. +...+.+.+.++||.+.|.+ ||+++ ..++++|++++++|++++
T Consensus 330 ~~~~~~--~~~~~~~p~gg~~~w-~~l-----~~~~~~~l~~~~~V~~~p~~----ri~~~-~~~~~~i~~~~~~i~~~~ 396 (396)
T PRK09257 330 KAKGPS--RDFDFIARQRGMFSY-SGL-----TPEQVDRLREEFGVYAVGSG----RINVA-GLNESNIDYVAEAIAAVL 396 (396)
T ss_pred HhcCCC--CCcccccccceEEEe-cCC-----CHHHHHHHHHcCCEEEcCCC----eEEEe-eCCHHHHHHHHHHHHhhC
Confidence 654210 013344567777776 332 22334444456699988752 88843 389999999999998764
No 196
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.93 E-value=8.7e-24 Score=207.09 Aligned_cols=305 Identities=16% Similarity=0.142 Sum_probs=202.9
Q ss_pred CeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCC---CeEEecCChhHHHHHHHHH
Q 012138 75 NKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGY---DMVLPMNTGAEGVETALKL 151 (470)
Q Consensus 75 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~---~~v~~~~sGteA~~~al~~ 151 (470)
..++||.++. +++|.+.+.+.. ..+.. |+.+. .+|.+.++++++. ++|++++|+++++..+..
T Consensus 24 ~~~i~ls~Ne--np~~~~~~~~~~---~~~~~-------Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~~- 89 (339)
T PRK06959 24 DAWLDLSTGI--NPHGYPVPPVPA---DAWRR-------LPEDD-DGLAACAARYYGAPDAAHVLPVAGSQAAIRALPA- 89 (339)
T ss_pred hhhceeccCC--CCCCCCCCCCCH---HHHHh-------CCCch-HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHHH-
Confidence 4578999887 456655333221 12221 33333 7899999998864 579999999999976543
Q ss_pred HHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCe-EEEEE
Q 012138 152 ARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI-AGFLF 230 (470)
Q Consensus 152 ~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~-~~vi~ 230 (470)
+.. ++ .|++..|+|.+........+.. +..++.++ +. +.+ .+ .++++
T Consensus 90 ~~~---------~g--~v~v~~P~y~~y~~~~~~~g~~-------------~~~v~~~~-~~----~~~---~~~~v~l~ 137 (339)
T PRK06959 90 LLP---------RG--RVGIAPLAYSEYAPAFARHGHR-------------VVPLDEAA-DT----LPA---ALTHLIVV 137 (339)
T ss_pred hcC---------CC--eEEEcCCCcHHHHHHHHHCCCE-------------EEeecccc-hh----ccc---cCCEEEEe
Confidence 222 33 3677889987654443322211 12332222 22 221 22 45668
Q ss_pred ccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecccccc-CCCcceeEEEecH
Q 012138 231 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPVSAVLADK 309 (470)
Q Consensus 231 epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~-gG~~~ig~v~~~~ 309 (470)
+| +||||.++ +.+.+++|.+.|+++++++|+||+|..|.............-..-+.||||.++ +|+ |+||+++++
T Consensus 138 nP-nNPTG~~~-s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~SfSK~~gl~Gl-RiGy~v~~~ 214 (339)
T PRK06959 138 NP-NNPTAERL-PAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLRSVGKFFGLAGV-RAGFVLAAP 214 (339)
T ss_pred CC-CCCCCCCC-CHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEecChhhcCCcch-heEEEecCH
Confidence 88 99999999 888999999999999999999999998743211111111110112349999998 999 999999999
Q ss_pred HHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEecc
Q 012138 310 EVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK 388 (470)
Q Consensus 310 ~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~-~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~ 388 (470)
++++.+.... ..|+.+.++++++.++|+.-. .+..++.+++.++++.+.|++++ +.. .+.+.|+++.+.
T Consensus 215 ~li~~l~~~~--~~~~vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g------~~~-~~~~~f~~~~~~- 284 (339)
T PRK06959 215 ALLAALRDAL--GAWTVSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAHG------FAV-HATPLFSWTDDP- 284 (339)
T ss_pred HHHHHHHHhc--CCCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC------CCc-cCcceEEEEeCC-
Confidence 9999886543 356678888888888875311 13456667777777777777652 111 234555555432
Q ss_pred CCCchhHHHHHHHHHHcCceeccC-CCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccC
Q 012138 389 TALPVSAYDICLKMKERGILAKPT-HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 389 ~~~~~~~~~~~~~l~~~Gv~~~~~-~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
+..++.+.|.++||++... ..+++|++ +..+++++++++++|+++++ .+.
T Consensus 285 -----~~~~l~~~l~~~GI~vr~~~~~~~lRis--i~~~~~e~~~l~~al~~~~~-~~~ 335 (339)
T PRK06959 285 -----RAAALHAALARRGIWTRYFAPPPSVRFG--LPADEAEWQRLEDALAECVP-TLA 335 (339)
T ss_pred -----CHHHHHHHHHhCCeEEEECCCCCeEEEE--CCCCHHHHHHHHHHHHHHHH-HHh
Confidence 3568999999999999764 35789999 44688899999999999887 553
No 197
>PLN02721 threonine aldolase
Probab=99.93 E-value=1.7e-23 Score=206.98 Aligned_cols=329 Identities=15% Similarity=0.136 Sum_probs=206.8
Q ss_pred eEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHh
Q 012138 76 KYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKW 155 (470)
Q Consensus 76 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~ 155 (470)
+++||.++.+. .++|.+.+++.+. ..... ..++.+...++++.++++++.+.++++++|++++..++......
T Consensus 6 ~~~~~~~~~~~----~~~~~~~~a~~~~--~~~~~-~~~~~~~~~~l~~~la~~~~~~~~~~~~~Gs~a~~~~l~~~~~~ 78 (353)
T PLN02721 6 RVVDLRSDTVT----KPTDAMRAAMANA--EVDDD-VLGYDPTALRLEEEMAKIFGKEAALFVPSGTMGNLISVLVHCDV 78 (353)
T ss_pred hhhhhhccccc----CCCHHHHHHHHhc--cCCCc-ccCCCHHHHHHHHHHHHHhCCceeEEecCccHHHHHHHHHHccC
Confidence 46788888655 2578888888654 11111 12345567899999999999888899999999988777765320
Q ss_pred chhcccCCCCCcEEEEEccCccccccc--hhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcC----CCeEEEE
Q 012138 156 GYVKKKFSIDEAIIVSCCGCFHGRTLA--AISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG----DQIAGFL 229 (470)
Q Consensus 156 ~~~~~~~~~g~~~ii~~~~~yhg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~----~~~~~vi 229 (470)
+|+ .|++.+++|...... .....+. +..+.+..++ ..+ |+++++++++++. +++++|+
T Consensus 79 --------~gd-~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~-~~~---d~~~l~~~i~~~~~~~~~~~~~v~ 142 (353)
T PLN02721 79 --------RGS-EVILGDNSHIHLYENGGISTLGGV---HPRTVKNNED-GTM---DLDAIEAAIRPKGDDHFPTTRLIC 142 (353)
T ss_pred --------CCC-eEEEcCccceehhcccchhhhcCc---eeEecCCCcC-CCc---CHHHHHHHHHhccCCCCCcceEEE
Confidence 344 677777775321111 1111111 1000111111 112 8999999997421 2678888
Q ss_pred Ecc-ccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcc---cCCccccccCCCCcc--eeeccccccCCCccee
Q 012138 230 FEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR---SGRMLASDWEEVRPD--MVILGKALGGGVIPVS 303 (470)
Q Consensus 230 ~ep-i~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~---~G~~~~~~~~~~~pd--i~s~sK~l~gG~~~ig 303 (470)
+++ .+||+|.++ +.+++++|.++|++||++||+||+|. ++. .+.. ........| +++++|++++ ++|
T Consensus 143 l~~~~~np~G~~~-~~~~l~~l~~l~~~~g~~livD~a~~-~~~~~~~~~~--~~~~~~~~d~~~~s~sK~l~~---~~G 215 (353)
T PLN02721 143 LENTHANCGGRCL-SVEYTDKVGELAKRHGLKLHIDGARI-FNASVALGVP--VHRLVKAADSVSVCLSKGLGA---PVG 215 (353)
T ss_pred EeccccccCCccc-cHHHHHHHHHHHHHcCCEEEEEchhh-hcchhhhCCC--HHHHhhhCCEEEEecccccCC---cee
Confidence 766 467899998 89999999999999999999999986 221 1111 110000123 4588999874 556
Q ss_pred E-EEecHHHHhhcCcCCccCCCCCC--HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceE--EEecc
Q 012138 304 A-VLADKEVMLCIQPGEHGSTFGGN--PLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVK--EVRGR 378 (470)
Q Consensus 304 ~-v~~~~~~~~~~~~~~~~~t~~~~--~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~--~~~~~ 378 (470)
+ +++++++++.+.........+.+ ...++++..+++...+ ..++..++.+++.+.|+++. .+. ...+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~L~~~~-----~~~~~~~~~~ 288 (353)
T PLN02721 216 SVIVGSKSFIRKAKRLRKTLGGGMRQVGVLAAAALVALQENVP--KLEDDHKKAKLLAEGLNQIK-----GLRVNVAAVE 288 (353)
T ss_pred eEEecCHHHHHhHHHHHHhcCCCeehhHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhCC-----CcEEecCCcc
Confidence 5 66888887765432111111111 2223333334432211 22333455667777776541 221 22345
Q ss_pred ceeEEEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 379 GLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 379 g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
+.++++.+.... ..+...++++|.++||.+.++..+++|+++++.++++|+++++++|++++.
T Consensus 289 ~~~~~~~~~~~~-~~~~~~~~~~L~~~gi~v~~~~~~~lR~~~~~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 289 TNIVYFDITDGS-RITAEKLCKSLEEHGVLLMPGNSSRIRVVTHHQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred ceEEEEEccCCc-cccHHHHHHHHHhCCcEEecCCCceEEEEecCcCCHHHHHHHHHHHHHHhh
Confidence 667666664320 125778999999999999999889999999989999999999999999876
No 198
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.93 E-value=2.8e-23 Score=192.50 Aligned_cols=339 Identities=15% Similarity=0.146 Sum_probs=222.1
Q ss_pred CeEEeccCCcccc-cCCCCCHHHHHHHHHHHHHcccc---CCCCCCCcHHHHHHHHhhhh----CCCeEEecCChhHHHH
Q 012138 75 NKYLDFLSAYSAV-NQGHCHPKIMKALQEQAEKLTLS---SRAFYNDKFPVFAERLTSMF----GYDMVLPMNTGAEGVE 146 (470)
Q Consensus 75 ~~~lD~~~~~~~~-~lG~~~p~v~~a~~~~~~~~~~~---~~~~~~~~~~~l~~~l~~~~----~~~~v~~~~sGteA~~ 146 (470)
+.+|-+..|-++. +-....++..+|+.++++..... +.......++++++.+.+-. ..+.|++|+|.++|++
T Consensus 61 k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe 140 (447)
T KOG0259|consen 61 KPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIE 140 (447)
T ss_pred ceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHH
Confidence 4666666653322 12225678899999999875432 22233445677777765544 3578999999999999
Q ss_pred HHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCC-CeeeecCCCHHHHHHHHHhcCCCe
Q 012138 147 TALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLP-GHLKVDFGDITALEKIFKESGDQI 225 (470)
Q Consensus 147 ~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~Le~~l~~~~~~~ 225 (470)
.++.++.+ ||. .|+...|+|.-....+....- ...+-.++| ..+.+ |++.+|.++++ +|
T Consensus 141 ~~i~~LA~---------p~a-NILlPrPGfp~Y~~~a~~~~l----EVR~ydlLPe~~weI---DL~~veal~DE---NT 200 (447)
T KOG0259|consen 141 LAISSLAN---------PGA-NILLPRPGFPLYDTRAIYSGL----EVRYYDLLPEKDWEI---DLDGVEALADE---NT 200 (447)
T ss_pred HHHHHhcC---------CCC-ceecCCCCCchHHHhhhhcCc----eeEeecccCccccee---chHHHHHhhcc---Ce
Confidence 99998765 444 888899998543332222111 111112233 35666 99999999998 66
Q ss_pred EEEE-EccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcc-ccccC-CCCccee--ecccc-ccCCC
Q 012138 226 AGFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWE-EVRPDMV--ILGKA-LGGGV 299 (470)
Q Consensus 226 ~~vi-~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~-~~~~~-~~~pdi~--s~sK~-l~gG~ 299 (470)
.+++ +|| +||.|.++ +.+-|++|+++|+|+|+++|.||||..+.+.+..| ....+ .+.|-+. .+||. +-+||
T Consensus 201 ~AivviNP-~NPcGnVy-s~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGW 278 (447)
T KOG0259|consen 201 VAIVVINP-NNPCGNVY-SEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGW 278 (447)
T ss_pred eEEEEeCC-CCCCcccc-cHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCc
Confidence 6555 666 99999999 99999999999999999999999999766666554 22222 3344333 66785 45999
Q ss_pred cceeEEEecHH--------HHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhC
Q 012138 300 IPVSAVLADKE--------VMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQF 368 (470)
Q Consensus 300 ~~ig~v~~~~~--------~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~ 368 (470)
|+||++..+. +.+.+... ..-+-+++.+.++|.-..|+.-.+ +.-..-++.+.+.-.+.|.++
T Consensus 279 -RlGWi~~hD~~gvf~~~~~~q~~~~~-~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~I---- 352 (447)
T KOG0259|consen 279 -RLGWIALHDPRGVFRDTKVVQGIKNF-LDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDI---- 352 (447)
T ss_pred -eeeeEEEecccccccchHHHHHHHHH-HhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcC----
Confidence 9999996431 11222211 122334555666665555543222 222333445555555555553
Q ss_pred CCceE-EEeccceeEEEEeccCCC----chhHHHHHHHHH-HcCceeccCC----CCEEEEecCCCCCHHHHHHHHHHHH
Q 012138 369 PNYVK-EVRGRGLFNAVEFDKTAL----PVSAYDICLKMK-ERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALH 438 (470)
Q Consensus 369 p~~~~-~~~~~g~~~~~~~~~~~~----~~~~~~~~~~l~-~~Gv~~~~~~----~~~iR~~~~~~~t~e~i~~~~~~l~ 438 (470)
| .+. .+++.|.++.| +..+-+ -.+..+||.+|. |+.+++.|+. +|++|++ +....+.+++++++|+
T Consensus 353 P-~l~cp~kPeg~mylm-v~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~--i~~~~~~leea~~Rik 428 (447)
T KOG0259|consen 353 P-CLTCPVKPEGCMYLM-VKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIV--ITVEEEMLEEAFSRIK 428 (447)
T ss_pred C-CcccCcCCCcceEEE-eccchhhhccccccHHHHHHHhhhcceEEeccccccCCCeEEEE--EccChHHHHHHHHHHH
Confidence 3 344 67889988887 332211 135567888875 5599998873 8999999 7889999999999999
Q ss_pred HHHhcccC
Q 012138 439 DVLELDLP 446 (470)
Q Consensus 439 ~~l~~~~~ 446 (470)
++.. +..
T Consensus 429 ~Fc~-RH~ 435 (447)
T KOG0259|consen 429 EFCD-RHS 435 (447)
T ss_pred HHHH-hhh
Confidence 9998 654
No 199
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.93 E-value=6.6e-24 Score=213.31 Aligned_cols=336 Identities=10% Similarity=0.069 Sum_probs=208.0
Q ss_pred CeEEeccCCcccccCCCCCHHHHHHHHHHHHHc-------cccCCCCCCCcHHHHHHHHhhhh----CCCeEE--ecCCh
Q 012138 75 NKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKL-------TLSSRAFYNDKFPVFAERLTSMF----GYDMVL--PMNTG 141 (470)
Q Consensus 75 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-------~~~~~~~~~~~~~~l~~~l~~~~----~~~~v~--~~~sG 141 (470)
...+|+..|...... .++.+.+++.+++... .+.+..+..++++.+++++.+.. ..++|+ .|++|
T Consensus 29 ~~~i~l~~g~~~~~~--~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~ 106 (404)
T PTZ00376 29 PSKVNLGIGAYRDEN--GKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSG 106 (404)
T ss_pred cccEecccceeECCC--CCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCc
Confidence 355788877432111 2333344454443221 11122233455666777665433 345777 48899
Q ss_pred hHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCC-CeeeecCCCHHHHHHHHHh
Q 012138 142 AEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLP-GHLKVDFGDITALEKIFKE 220 (470)
Q Consensus 142 teA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~Le~~l~~ 220 (470)
++|+..++.++... .. +|+ .|++.+|+|++........+..... .+... +...+ |++.+++++++
T Consensus 107 ~~al~~~~~~l~~~--~~----~Gd-~Vlv~~P~y~~~~~~~~~~G~~~~~----v~l~~~~~~~~---d~~~l~~~~~~ 172 (404)
T PTZ00376 107 TGALRLGFEFLKRF--LP----AGT-TVYVSNPTWPNHVNIFKSAGLNVKE----YRYYDPKTKGL---DFDGMLEDLRT 172 (404)
T ss_pred chHHHHHHHHHHHh--cC----CCC-EEEEcCCCchhHHHHHHHcCCceee----ccccCcccCCc---CHHHHHHHHHh
Confidence 99998887654321 11 455 8999999998775544433332111 11100 11222 78999999875
Q ss_pred cCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCC---c---cccccCC-CCcceeeccc
Q 012138 221 SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR---M---LASDWEE-VRPDMVILGK 293 (470)
Q Consensus 221 ~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~---~---~~~~~~~-~~pdi~s~sK 293 (470)
...+++++++..+|||||.++ +++.+++|.++|++||++||+||+|.+|.+.+. . ..+.... ...-+.||||
T Consensus 173 ~~~~~~~~~~~~p~NPTG~~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK 251 (404)
T PTZ00376 173 APNGSVVLLHACAHNPTGVDP-TEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSK 251 (404)
T ss_pred CCCCCEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCC
Confidence 433456666555599999999 999999999999999999999999998765431 1 1111111 1123459999
Q ss_pred ccc-CCCcceeEE---EecHHHHhhcCcC---CccCCC-CCCHHHHHHHHHHHHHHh---h-----hhHHHHHHHHHHHH
Q 012138 294 ALG-GGVIPVSAV---LADKEVMLCIQPG---EHGSTF-GGNPLASAVAIASLDVIR---D-----EKLAERSAHLGEEL 357 (470)
Q Consensus 294 ~l~-gG~~~ig~v---~~~~~~~~~~~~~---~~~~t~-~~~~~~~aaa~a~l~~~~---~-----~~~~~~~~~~~~~l 357 (470)
.++ +|+ |+||+ ++++++++.+... ....++ +.+.+++.++..+|+.-. + ...+++++++++.+
T Consensus 252 ~~~~~Gl-RvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l 330 (404)
T PTZ00376 252 NMGLYGE-RIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLL 330 (404)
T ss_pred ccccccc-ccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999 999 99998 5687655443211 112333 346677777777664211 0 22344566677777
Q ss_pred HHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHc-CceeccCCCCEEEEecCCCCCHHHHHHHHHH
Q 012138 358 RQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPTHDTIVRLTPPLSISSNELQEGSKA 436 (470)
Q Consensus 358 ~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~ 436 (470)
.+.|+++... ..+....+.|.|+.| +.. ..+++++|.++ ||.+.|++ |++.+. .+.+++++++++
T Consensus 331 ~~~L~~~~~~--~~~~~~~p~gg~f~~-~~~------~~~~~~~L~~~~~v~v~p~~----Ris~~~-~~~~~~~~~~~~ 396 (404)
T PTZ00376 331 YDELKALGSP--GDWEHIINQIGMFSF-TGL------TKEQVERLIEKYHIYLLDNG----RISVAG-LTSKNVDYVAEA 396 (404)
T ss_pred HHHHHhcCCC--CcccccccCceEEEe-cCC------CHHHHHHHHHhCCEeecCCC----eEEEec-cCHHhHHHHHHH
Confidence 7777665211 113334567777777 332 24688888888 99998873 998432 799999999999
Q ss_pred HHHHHh
Q 012138 437 LHDVLE 442 (470)
Q Consensus 437 l~~~l~ 442 (470)
|++++.
T Consensus 397 l~~~~~ 402 (404)
T PTZ00376 397 IHDVVR 402 (404)
T ss_pred HHHHHh
Confidence 999886
No 200
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.93 E-value=1.4e-23 Score=210.98 Aligned_cols=338 Identities=12% Similarity=0.065 Sum_probs=201.4
Q ss_pred CCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccc------c-CCCCCCCcHHHHHHHHhh-hhCCCeEEecCChhHHH
Q 012138 74 GNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTL------S-SRAFYNDKFPVFAERLTS-MFGYDMVLPMNTGAEGV 145 (470)
Q Consensus 74 G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~------~-~~~~~~~~~~~l~~~l~~-~~~~~~v~~~~sGteA~ 145 (470)
+..++|+..+.... ..+|.+.+++.+.++.... + +.....++++.+++++.+ ....++|++|+|+++++
T Consensus 32 ~~~~i~l~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al 108 (402)
T TIGR03542 32 SADIIRLGIGDTTQ---PLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDV 108 (402)
T ss_pred CCCeEEcCCCCCCC---CCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHH
Confidence 45678888774432 2578899999888765421 1 111222334444444321 13457899999999999
Q ss_pred HHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCe
Q 012138 146 ETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 225 (470)
Q Consensus 146 ~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~ 225 (470)
..++. +.. +|+ .|++..|+|.+........+. +.....-+.+ .....++.+.-+.+...+.+. .++
T Consensus 109 ~~l~~-l~~---------~gd-~Vlv~~P~y~~~~~~~~~~g~-~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~-~~~ 174 (402)
T TIGR03542 109 FRLQS-LFG---------SDN-TVAVQDPVYPAYVDSNVMAGR-AGVLDDDGRY-SKITYLPCTKENNFIPDLPEE-PKI 174 (402)
T ss_pred HHHHH-hcC---------CCC-EEEEeCCCCcchHHHHHHcCC-cccccccccc-ceEEEeecchhhCCCCCcccc-CCc
Confidence 87543 322 354 788899999776544433222 0000000000 011222221000010001111 256
Q ss_pred EEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCc-ccc-ccCC---CCcceeecccccc-CCC
Q 012138 226 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LAS-DWEE---VRPDMVILGKALG-GGV 299 (470)
Q Consensus 226 ~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~-~~~-~~~~---~~pdi~s~sK~l~-gG~ 299 (470)
++|++..++||||.++ +.+.+++|.++|++||++||+||+|..|...+.. ... ...+ ....+.||||.++ +|+
T Consensus 175 ~~i~l~nP~NPTG~~~-s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGl 253 (402)
T TIGR03542 175 DIIYLCSPNNPTGTVL-TKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGV 253 (402)
T ss_pred eEEEEeCCCCCCCccC-CHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCc
Confidence 7777445599999999 9999999999999999999999999987544321 111 1111 1223459999997 998
Q ss_pred cceeEEEecHHHH--------hhcCcCCccCCCCCCHHHHHHHHHHHHH--Hh-hhhHHHHHHHHHHHHHHHHHHHHhhC
Q 012138 300 IPVSAVLADKEVM--------LCIQPGEHGSTFGGNPLASAVAIASLDV--IR-DEKLAERSAHLGEELRQHLFKIQQQF 368 (470)
Q Consensus 300 ~~ig~v~~~~~~~--------~~~~~~~~~~t~~~~~~~~aaa~a~l~~--~~-~~~~~~~~~~~~~~l~~~L~~l~~~~ 368 (470)
|+||++++++++ ..+.........+.+.+++.++.+.++. .. ..+..+.++++.+.+.+.|++.
T Consensus 254 -RiG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~---- 328 (402)
T TIGR03542 254 -RLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAA---- 328 (402)
T ss_pred -ceEEEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc----
Confidence 999999998876 2221111112224567777776665542 11 1223344555666666666553
Q ss_pred CCceEEEecc-ceeEEEEeccCCCchhHHHHHHHHHH-cCceeccCC------CCEEEEecCCCCCHHHHHHHHHHHHHH
Q 012138 369 PNYVKEVRGR-GLFNAVEFDKTALPVSAYDICLKMKE-RGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDV 440 (470)
Q Consensus 369 p~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~~~ 440 (470)
.+....+. |.|+++.++.. .++.++.+.|.+ .||.+.|+. .+++||+ +..+++++++++++|+++
T Consensus 329 --~~~~~~~~~~~f~~v~l~~~---~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis--~~~~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 329 --GFKVYGGEHAPYLWVKTPEG---ISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFS--AFGKRENIVEACERIKEA 401 (402)
T ss_pred --CceecCCCceeEEEEECCCC---CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEE--ecCCHHHHHHHHHHHHhh
Confidence 13333443 55666666432 256788888875 599998863 4799999 456899999999999876
Q ss_pred H
Q 012138 441 L 441 (470)
Q Consensus 441 l 441 (470)
|
T Consensus 402 ~ 402 (402)
T TIGR03542 402 L 402 (402)
T ss_pred C
Confidence 4
No 201
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.93 E-value=2.3e-23 Score=206.44 Aligned_cols=320 Identities=19% Similarity=0.142 Sum_probs=198.1
Q ss_pred CeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHHHH
Q 012138 75 NKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLA 152 (470)
Q Consensus 75 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~~~ 152 (470)
..++||..+... ++ .++.+.+++.+.+.....+ ......+|.+.++++++ .++|++|+|+++++..+++.+
T Consensus 22 ~~~i~l~~~~n~--~~-~~~~~~~a~~~~~~~~~~Y----~~~~~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~~l 94 (360)
T PRK07392 22 DAILDFSASINP--LG-PPESVIAAIQSALSALRHY----PDPDYRELRLALAQHHQLPPEWILPGNGAAELLTWAGREL 94 (360)
T ss_pred ccEEEeCCcCCC--CC-CCHHHHHHHHHHHHHhhcC----CCcCHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHh
Confidence 357888876433 33 7789999988877653322 22223566677777664 567999999999999888764
Q ss_pred HHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCC-eeeecCCCHHHHHHHHHhcCCCeEEEE-E
Q 012138 153 RKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-HLKVDFGDITALEKIFKESGDQIAGFL-F 230 (470)
Q Consensus 153 ~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~Le~~l~~~~~~~~~vi-~ 230 (470)
. +++ .|++..|+|.+........+... ... +..++ .......+++++++.. .++++++ +
T Consensus 95 ~----------~g~-~vlv~~P~y~~~~~~~~~~g~~~-~~v---~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~ 155 (360)
T PRK07392 95 A----------QLR-AVYLITPAFGDYRRALRAFGATV-KEL---PLPLDQPSPGLTLRLQTLPPQL----TPNDGLLLN 155 (360)
T ss_pred C----------CCC-eEEEECCCcHHHHHHHHHcCCeE-EEE---ecccccCCcccccCHHHHHHhc----cCCCEEEEe
Confidence 2 354 78889999976654444332211 100 11000 0000001445444332 1445555 6
Q ss_pred ccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccc-cccCCCCc---ceeecccccc-CCCcceeEE
Q 012138 231 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEEVRP---DMVILGKALG-GGVIPVSAV 305 (470)
Q Consensus 231 epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~-~~~~~~~p---di~s~sK~l~-gG~~~ig~v 305 (470)
+| +||||.+++ .++|.++++++++ +|+||+|.+|.+.+.... .....-.+ -+.||||.++ +|+ |+||+
T Consensus 156 nP-~NPTG~~~~----~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~Gl-RiG~~ 228 (360)
T PRK07392 156 NP-HNPTGKLWS----REAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGL-RLGYA 228 (360)
T ss_pred CC-CCCCCCCcC----HHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCch-heeee
Confidence 66 999999995 5667788888986 666999998865553211 11111112 2349999999 999 99999
Q ss_pred EecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEE
Q 012138 306 LADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV 384 (470)
Q Consensus 306 ~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~-~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~ 384 (470)
++++++++.+.... ..++.+.+++.++.++|+.-. .+...+.+++.++++.+.|+. +| .+....+.|.|+++
T Consensus 229 v~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~~-~~~~~~~~~~fl~~ 301 (360)
T PRK07392 229 IAHPDRLQRWQQWR--DPWPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLAS----LP-GLTPLPSAANFLLV 301 (360)
T ss_pred eCCHHHHHHHHhhC--CCCCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHh----CC-CcEECCCCCCEEEE
Confidence 99999988876432 346788888888887775311 122333445555555555544 22 33333445656555
Q ss_pred EeccCCCchhHHHHHHHHH-HcCceeccCC------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 385 EFDKTALPVSAYDICLKMK-ERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 385 ~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
.+. . ++.++++.+. ++||.+.|+. .+++||+. .+.++.+++.+.|+++++
T Consensus 302 ~~~--~---~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~---~~~~~~~~l~~al~~~~~ 358 (360)
T PRK07392 302 QSQ--G---SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAV---RTEAENQRLLEALAAILA 358 (360)
T ss_pred EcC--C---CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEe---CCHHHHHHHHHHHHHHhh
Confidence 443 2 4677888864 5699998763 47999993 345556777777776654
No 202
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.92 E-value=2.1e-23 Score=198.90 Aligned_cols=335 Identities=16% Similarity=0.215 Sum_probs=223.6
Q ss_pred eEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCC------CCCcHHHHHHHHhhhhCC--CeEEecCChhHHHHH
Q 012138 76 KYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAF------YNDKFPVFAERLTSMFGY--DMVLPMNTGAEGVET 147 (470)
Q Consensus 76 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~------~~~~~~~l~~~l~~~~~~--~~v~~~~sGteA~~~ 147 (470)
-|+|..+.. + ..|++.+++...+.....++... .....++.++.+++..|. ++|+||+||||+++.
T Consensus 3 iYlD~~ATT---p---~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNl 76 (386)
T COG1104 3 IYLDNAATT---P---VDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNL 76 (386)
T ss_pred ccccccccC---C---CCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHH
Confidence 477876663 3 57999999999988762222111 123345566778888764 579999999999999
Q ss_pred HHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEE
Q 012138 148 ALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAG 227 (470)
Q Consensus 148 al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~ 227 (470)
||+-+... +..+ ++++.||+..-. |-.....+..-...++...|.+...+ -.+ |+++|+++|++ +|.+
T Consensus 77 aI~g~~~a-~~~~---~~~~HIIts~iE-H~aVl~~~~~Le~~g~~Vtyl~V~~~-G~v---~~e~L~~al~~---~T~L 144 (386)
T COG1104 77 AIKGAALA-YRNA---QKGKHIITSAIE-HPAVLNTCRYLERQGFEVTYLPVDSN-GLV---DLEQLEEALRP---DTIL 144 (386)
T ss_pred HHHhhHHh-hhcc---cCCCeEEEcccc-cHHHHHHHHHHHhcCCeEEEeCCCCC-CeE---cHHHHHHhcCC---CceE
Confidence 99964321 2111 123355554333 55544443322222333333333222 222 89999999987 7999
Q ss_pred EEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccc-cccCCCcceeEEE
Q 012138 228 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGK-ALGGGVIPVSAVL 306 (470)
Q Consensus 228 vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK-~l~gG~~~ig~v~ 306 (470)
|.+..+||++|++.| +++|.++|+++|+++++|.+|+ +|+.- ...+.++ .|+++||- .++|.- .+|+++
T Consensus 145 VSim~aNnE~G~IQp----I~ei~~i~k~~~i~fHvDAvQa-~Gkip--i~~~~~~--vD~ls~SaHK~~Gpk-GiGaLy 214 (386)
T COG1104 145 VSIMHANNETGTIQP----IAEIGEICKERGILFHVDAVQA-VGKIP--IDLEELG--VDLLSFSAHKFGGPK-GIGALY 214 (386)
T ss_pred EEEEecccCeeeccc----HHHHHHHHHHcCCeEEEehhhh-cCcee--ccccccC--cceEEeehhhccCCC-ceEEEE
Confidence 999999999999999 9999999999999999999998 43321 2233333 59999984 344443 889999
Q ss_pred ecHHHHhhcCcCCccCCC-------CCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEE---
Q 012138 307 ADKEVMLCIQPGEHGSTF-------GGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKE--- 374 (470)
Q Consensus 307 ~~~~~~~~~~~~~~~~t~-------~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~--- 374 (470)
.++.+. +.+..+++.+ +.|..++++..+++++..+ +....+++.++++|.+.|.+.. |.....
T Consensus 215 v~~~~~--~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~---p~~~~~g~~ 289 (386)
T COG1104 215 VRPGVR--LEPLIHGGGQERGLRSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEII---PDVYLNGDD 289 (386)
T ss_pred ECCCCc--cCceeccCcCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CcEEEcCCc
Confidence 866542 3343333332 3577777777777776443 4567778888888888887642 111110
Q ss_pred EeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCC-----------------------CCEEEEecCCCCCHHHHH
Q 012138 375 VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-----------------------DTIVRLTPPLSISSNELQ 431 (470)
Q Consensus 375 ~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-----------------------~~~iR~~~~~~~t~e~i~ 431 (470)
.......+.+.++. ...+.+...|..+||.++.++ ...+||++...+|++|++
T Consensus 290 ~~rlP~~~~~~f~g----v~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~ 365 (386)
T COG1104 290 EPRLPNILNFSFPG----VEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEID 365 (386)
T ss_pred ccCCCCeEEEEeCC----CcHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHH
Confidence 11223334444443 367888888888999998652 578999999999999999
Q ss_pred HHHHHHHHHHhcccCCC
Q 012138 432 EGSKALHDVLELDLPKM 448 (470)
Q Consensus 432 ~~~~~l~~~l~~~~~~~ 448 (470)
.+++.|.++++ .+++.
T Consensus 366 ~~~~~l~~~i~-~lr~~ 381 (386)
T COG1104 366 AAAEALKEIIK-RLREL 381 (386)
T ss_pred HHHHHHHHHHH-HHhhh
Confidence 99999999999 87654
No 203
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.92 E-value=1.1e-22 Score=204.61 Aligned_cols=329 Identities=14% Similarity=0.139 Sum_probs=215.3
Q ss_pred CCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCC-------CCCcHHHHHHHHhhhhCC---CeEEecCChhH
Q 012138 74 GNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAF-------YNDKFPVFAERLTSMFGY---DMVLPMNTGAE 143 (470)
Q Consensus 74 G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~-------~~~~~~~l~~~l~~~~~~---~~v~~~~sGte 143 (470)
+..|+|-.+. |..++.+.+++.+.++......... ..+..+++.+.+++++|. +.|++++|+++
T Consensus 19 ~~~yld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~ 92 (401)
T PRK10874 19 AGVYLDSAAT------ALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTE 92 (401)
T ss_pred ceEEEeCCcc------cCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHH
Confidence 4567776544 2356889999988886543221111 123356777888888875 46999999999
Q ss_pred HHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchh---cccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHh
Q 012138 144 GVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAI---SMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKE 220 (470)
Q Consensus 144 A~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~ 220 (470)
++..+++.+... ..++|+ .||+.++.|++...... ...+.... ..+...+ ..+ |++++++.+++
T Consensus 93 ~i~~~~~~~~~~-----~~~~gd-~vl~~~~~~~s~~~~~~~~~~~~g~~v~---~v~~~~~-~~~---d~~~l~~~i~~ 159 (401)
T PRK10874 93 SINLVAQSYARP-----RLQPGD-EIIVSEAEHHANLVPWLMVAQQTGAKVV---KLPLGAD-RLP---DVDLLPELITP 159 (401)
T ss_pred HHHHHHHHhhhc-----cCCCcC-EEEECCcchHHHHHHHHHHHHHhCCEEE---EEecCCC-CcC---CHHHHHHhcCc
Confidence 999998876310 011455 78887888654221111 11111111 0111000 111 78999999865
Q ss_pred cCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecc--ccccCC
Q 012138 221 SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGGG 298 (470)
Q Consensus 221 ~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~s--K~l~gG 298 (470)
++++|++..++|++|.+.| +++|.++|+++|+++|+|++|+ ++.. ...... ..+|+.++| |.+++
T Consensus 160 ---~t~lv~i~~~~n~tG~~~~----~~~i~~l~~~~g~~~ivD~a~~-~g~~--~~~~~~--~~~d~~~~s~~K~~gp- 226 (401)
T PRK10874 160 ---RTRILALGQMSNVTGGCPD----LARAITLAHQAGMVVMVDGAQG-AVHF--PADVQA--LDIDFYAFSGHKLYGP- 226 (401)
T ss_pred ---CcEEEEEeCCcccccCcCC----HHHHHHHHHHcCCEEEEECCcc-cccc--cCCchh--cCCCEEEEecccccCC-
Confidence 7888887777999999998 9999999999999999999997 2211 111222 235766554 96653
Q ss_pred CcceeEEEecHHHHhhcCcCCcc------------------CCC---CCCHHHHHHHHHHHHHHhh---hhHHHHHHHHH
Q 012138 299 VIPVSAVLADKEVMLCIQPGEHG------------------STF---GGNPLASAVAIASLDVIRD---EKLAERSAHLG 354 (470)
Q Consensus 299 ~~~ig~v~~~~~~~~~~~~~~~~------------------~t~---~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~ 354 (470)
. .+|++++++++++.+.+...+ ..| +.|..+++++.++++.+.+ ..+.++.+++.
T Consensus 227 ~-G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~ 305 (401)
T PRK10874 227 T-GIGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLA 305 (401)
T ss_pred C-ccEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 2 578999999988876542211 011 3566677777788887654 33556666677
Q ss_pred HHHHHHHHHHHhhCCCceEEE-eccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCC------------CCEEEEec
Q 012138 355 EELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------------DTIVRLTP 421 (470)
Q Consensus 355 ~~l~~~L~~l~~~~p~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------------~~~iR~~~ 421 (470)
+++.+.|+++ | .+... .+.+.++.+.++. .+..++.+.|.++||.+.++. .+++|+++
T Consensus 306 ~~l~~~l~~~----~-g~~~~~~~~~~i~~~~~~~----~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~ 376 (401)
T PRK10874 306 TLAEDALAKL----P-GFRSFRCQDSSLLAFDFAG----VHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASF 376 (401)
T ss_pred HHHHHHHhcC----C-CEEEeCCCCCcEEEEEECC----cCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEe
Confidence 7777766553 2 23332 2344566665543 246789999999999987643 47899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhccc
Q 012138 422 PLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 422 ~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
...+|++|++++++.|+++++ .+
T Consensus 377 ~~~nt~edid~ll~al~~~~~-~~ 399 (401)
T PRK10874 377 APYNTQSDVDALVNAVDRALE-LL 399 (401)
T ss_pred cccCCHHHHHHHHHHHHHHHH-Hh
Confidence 999999999999999999987 54
No 204
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.92 E-value=9.4e-24 Score=207.57 Aligned_cols=320 Identities=17% Similarity=0.125 Sum_probs=205.6
Q ss_pred eccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchh
Q 012138 79 DFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYV 158 (470)
Q Consensus 79 D~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~ 158 (470)
||.+. +++| ++|.+.+++.+.+.... ..+..+...+++++++++++.+.+++++||++|+..+++.+..
T Consensus 1 ~~~~~---~~~~-~~~~v~~a~~~~~~~~~---~~~~~~~~~~l~~~~a~~~g~~~~~~~~~gt~a~~~~~~~l~~---- 69 (338)
T cd06502 1 DFRSD---TVTG-PTPEMLEAMAAANVGDD---VYGEDPTTAKLEARAAELFGKEAALFVPSGTAANQLALAAHTQ---- 69 (338)
T ss_pred Ccccc---cCCC-CCHHHHHHHHhcccCCc---ccCCCHHHHHHHHHHHHHhCCCeEEEecCchHHHHHHHHHhcC----
Confidence 56665 4556 78999999987653221 1123456889999999999977899999999999999887643
Q ss_pred cccCCCCCcEEEEEccCccccccch---hcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcC----CCeEEEEEc
Q 012138 159 KKKFSIDEAIIVSCCGCFHGRTLAA---ISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG----DQIAGFLFE 231 (470)
Q Consensus 159 ~~~~~~g~~~ii~~~~~yhg~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~----~~~~~vi~e 231 (470)
+|+ .|++..++ |...... ..+.+..... .+. +... .|+++|++++++.. .++++|+++
T Consensus 70 -----~gd-~v~~~~~~-~~~~~~~~~~~~~~g~~~~~---v~~--~~~~---~d~~~l~~~i~~~~~~~~~~~~~v~l~ 134 (338)
T cd06502 70 -----PGG-SVICHETA-HIYTDEAGAPEFLSGVKLLP---VPG--ENGK---LTPEDLEAAIRPRDDIHFPPPSLVSLE 134 (338)
T ss_pred -----CCC-eEEEecCc-ceeeecCCcHHHHcCceEEe---ecC--CCCc---CCHHHHHHHhhccCCCcCCcceEEEEE
Confidence 455 66666665 4332211 1111211110 111 0111 28999999997521 257888866
Q ss_pred cccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCC--cccCCccccccCCCCccee--eccccccCCCcceeE-EE
Q 012138 232 PIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL--ARSGRMLASDWEEVRPDMV--ILGKALGGGVIPVSA-VL 306 (470)
Q Consensus 232 pi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~--g~~G~~~~~~~~~~~pdi~--s~sK~l~gG~~~ig~-v~ 306 (470)
.++|+ |.++ +.+.+++|.++|++||+++|+||+|..+ ...|.. .......+|++ +++|.++. +.|+ ++
T Consensus 135 ~p~n~-g~~~-~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~--~~~~~~~~d~~~~s~sK~~~~---~~g~~~~ 207 (338)
T cd06502 135 NTTEG-GTVY-PLDELKAISALAKENGLPLHLDGARLANAAAALGVA--LKTYKSGVDSVSFCLSKGGGA---PVGAVVV 207 (338)
T ss_pred eecCC-cccc-CHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCC--HHHHHhcCCEEEEeccccCCC---ccceEEE
Confidence 66887 5566 7888999999999999999999998521 112221 11111234544 78898863 2244 55
Q ss_pred ecHHHHhhcCcCC--ccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEE
Q 012138 307 ADKEVMLCIQPGE--HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV 384 (470)
Q Consensus 307 ~~~~~~~~~~~~~--~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~ 384 (470)
+++++++.+.... .+.+++.+++.++++.++|+.-......++..++++++.+.|++++. ....+.+.+..+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~------~~~~~~~~~~~v 281 (338)
T cd06502 208 GNRDFIARARRRRKQAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEELGG------LESEVQTNIVLL 281 (338)
T ss_pred CCHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCC------CcccccCCeEEE
Confidence 7888888776432 23455566777777777665311133556777778888888877532 122345666666
Q ss_pred EeccCCCchhHHHHHHHHH---HcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHH
Q 012138 385 EFDKTALPVSAYDICLKMK---ERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHD 439 (470)
Q Consensus 385 ~~~~~~~~~~~~~~~~~l~---~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~ 439 (470)
.+.... ....++.+.+. ++|+.+.+...+++||++++.+|++++++++++|++
T Consensus 282 ~~~~~~--~~~~~l~~~l~~~~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 282 DPVEAN--AVFVELSKEAIERRGEGVLFYAWGEGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred ecCCcc--HHHHHHHHHHHHhhhCCEEEEecCCCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 553221 12334444443 679999877668999999999999999999999865
No 205
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.92 E-value=5.5e-23 Score=209.35 Aligned_cols=303 Identities=16% Similarity=0.098 Sum_probs=191.5
Q ss_pred CCcHHHHHHHHhhhh------CCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCC
Q 012138 116 NDKFPVFAERLTSMF------GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD 189 (470)
Q Consensus 116 ~~~~~~l~~~l~~~~------~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~ 189 (470)
.++++.+++++.+.+ ..++|++|+|+++++..++.++.. +|+ .|++..|+|.+.........+.
T Consensus 89 ~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~---------pGd-~Vlv~~P~Y~~~~~~~~~~~g~ 158 (468)
T PLN02450 89 PAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAE---------PGD-AFLLPTPYYPGFDRDLKWRTGV 158 (468)
T ss_pred HHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCC---------CCC-EEEECCCCCCchHHHHhhcCCc
Confidence 346677777776543 346799999999999999887754 455 8888899987654333211121
Q ss_pred cccccCCCCCCC-CeeeecCCCHHHHHHHHHhc---CCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEec
Q 012138 190 NEAIRGFGPLLP-GHLKVDFGDITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 265 (470)
Q Consensus 190 ~~~~~~~~~~~~-~~~~~~~~d~~~Le~~l~~~---~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~De 265 (470)
.... .+... +...+ |++++++++++. +.++++|++..++||||.++ +.+.+++|.++|++||++||+||
T Consensus 159 ~~v~---v~~~~~~~~~~---~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~-s~e~l~~ll~~a~~~~~~iI~DE 231 (468)
T PLN02450 159 EIVP---IHCSSSNGFQI---TESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTT-TRTELNLLVDFITAKNIHLISDE 231 (468)
T ss_pred EEEE---EecCCccCCcC---CHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCccc-CHHHHHHHHHHHHHCCcEEEEEc
Confidence 1110 01100 01111 678898888652 23677666443499999999 99999999999999999999999
Q ss_pred cccCCcccCCcc-c-cccC------C--CCc---ceeecccccc-CCCcceeEEEecHH-HHhhcCcCCccCCCCCCHHH
Q 012138 266 IQSGLARSGRML-A-SDWE------E--VRP---DMVILGKALG-GGVIPVSAVLADKE-VMLCIQPGEHGSTFGGNPLA 330 (470)
Q Consensus 266 v~~g~g~~G~~~-~-~~~~------~--~~p---di~s~sK~l~-gG~~~ig~v~~~~~-~~~~~~~~~~~~t~~~~~~~ 330 (470)
+|.++.+.+..+ . .... + ... -+-+|||.++ +|+ |+|+++++++ +.+.+.... .....+.++
T Consensus 232 ~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~Gl-RiG~li~~~~~l~~~~~~~~--~~~~~s~~~ 308 (468)
T PLN02450 232 IYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGF-RVGAIYSNDEMVVSAATKMS--SFGLVSSQT 308 (468)
T ss_pred cccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCc-cEEEEEECCHHHHHHHHHHh--hcCCCCHHH
Confidence 999765554321 1 1110 0 011 2449999998 999 9999999744 555543221 112356777
Q ss_pred HHHHHHHHHHHh--h---hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccce-eEEEEeccCCC---chhHHHHHHH
Q 012138 331 SAVAIASLDVIR--D---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL-FNAVEFDKTAL---PVSAYDICLK 401 (470)
Q Consensus 331 ~aaa~a~l~~~~--~---~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~-~~~~~~~~~~~---~~~~~~~~~~ 401 (470)
+.++.+.|+.-. + +..++.+++..+.+.+.|+++ .+....+.|. |+++.+..... .....++.+.
T Consensus 309 Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~------gi~~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ 382 (468)
T PLN02450 309 QYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA------GIKCLKSNAGLFCWVDMRHLLKSNTFEAEMELWKK 382 (468)
T ss_pred HHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc------CCcccCCCceEEEEEEchHhcCcCCchHHHHHHHH
Confidence 777766664211 1 223344455555555555543 1333455555 55555432110 0123456777
Q ss_pred HHH-cCceeccCC------CCEEEEecCCCCCHHHHHHHHHHHHHHHhcccC
Q 012138 402 MKE-RGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 402 l~~-~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
|.+ .||.+.|+. ++++|++... .+++++++++++|++++. +..
T Consensus 383 ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~-~~~~~l~~~l~ri~~~l~-~~~ 432 (468)
T PLN02450 383 IVYEVKLNISPGSSCHCTEPGWFRVCFAN-MSEETLDLAMKRLKSFVE-SDS 432 (468)
T ss_pred HHHhCCEEEeCccccCCCCCCEEEEEecC-CCHHHHHHHHHHHHHHHH-hcc
Confidence 765 699999873 5799999432 578999999999999998 655
No 206
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.92 E-value=5.1e-23 Score=201.30 Aligned_cols=268 Identities=18% Similarity=0.215 Sum_probs=182.7
Q ss_pred cHHHHHHHHhhhhCC--CeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccC
Q 012138 118 KFPVFAERLTSMFGY--DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRG 195 (470)
Q Consensus 118 ~~~~l~~~l~~~~~~--~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~ 195 (470)
...+++++++++++. +++++|+|+++++..+.+++ . ++ .|++..++|+......... +.
T Consensus 48 ~~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~~l-~---------~g--~vl~~~p~y~~~~~~~~~~-g~------ 108 (330)
T TIGR01140 48 EYDELRAAAAAYYGLPAASVLPVNGAQEAIYLLPRLL-A---------PG--RVLVLAPTYSEYARAWRAA-GH------ 108 (330)
T ss_pred cHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHh-C---------CC--eEEEeCCCcHHHHHHHHHc-CC------
Confidence 358888888888874 68999999999988865543 2 34 5777889987654332211 10
Q ss_pred CCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEE-EccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccC
Q 012138 196 FGPLLPGHLKVDFGDITALEKIFKESGDQIAGFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG 274 (470)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi-~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G 274 (470)
.+..++ |++++++.++ ++++|+ ++| +||+|.++ +.+.+++|.++|++||+++|+||+|.++....
T Consensus 109 ------~~~~~~--d~~~l~~~~~----~~~~v~i~~p-~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~ 174 (330)
T TIGR01140 109 ------EVVELP--DLDRLPAALE----ELDVLVLCNP-NNPTGRLI-PPETLLALAARLRARGGWLVVDEAFIDFTPDA 174 (330)
T ss_pred ------EEEEeC--CHHHHHhhcc----cCCEEEEeCC-CCCCCCCC-CHHHHHHHHHHhHhcCCEEEEECcccccCCcc
Confidence 123333 8999998884 344555 555 99999999 99999999999999999999999999775432
Q ss_pred CccccccCCCCccee---ecccccc-CCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh-hhHHHH
Q 012138 275 RMLASDWEEVRPDMV---ILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAER 349 (470)
Q Consensus 275 ~~~~~~~~~~~pdi~---s~sK~l~-gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~-~~~~~~ 349 (470)
..... .+..++++ +|||.++ +|+ |+||+++++++++.+.... ..++.+.++++++...++.-.- +..+++
T Consensus 175 ~~~~~--~~~~~~~i~~~S~SK~~g~~G~-R~G~i~~~~~~~~~l~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~ 249 (330)
T TIGR01140 175 SLAPQ--AARFPGLVVLRSLTKFFGLAGL-RLGFVVAHPALLARLREAL--GPWTVNGPARAAGRAALADTAWQAATRAR 249 (330)
T ss_pred chhhH--hccCCCEEEEEecchhhcCchh-hhhheeCCHHHHHHHHhcC--CCCCchHHHHHHHHHHHhchHHHHHHHHH
Confidence 22111 11112333 9999998 898 9999999999998887533 3566777887777766652111 234555
Q ss_pred HHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCC------CCEEEEecCC
Q 012138 350 SAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------DTIVRLTPPL 423 (470)
Q Consensus 350 ~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------~~~iR~~~~~ 423 (470)
++.+.+++.+.|+++ + .+....+.|.|.++.+. +..+++++|+++||.+.|+. .+++|+++
T Consensus 250 ~~~~~~~l~~~L~~~----~-~~~~~~~~~~f~~~~~~------~~~~l~~~l~~~gi~v~pg~~f~~~~~~~iRi~~-- 316 (330)
T TIGR01140 250 LAAERARLAALLARL----G-GLEVVGGTALFLLVRTP------DAAALHEALARRGILIRDFDNFPGLDPRYLRFAL-- 316 (330)
T ss_pred HHHHHHHHHHHHHhC----C-CceECCCCCeEEEEEcC------CHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEe--
Confidence 566666666666553 2 23333455666665443 35689999999999998752 46899994
Q ss_pred CCCHHHHHHHHHHH
Q 012138 424 SISSNELQEGSKAL 437 (470)
Q Consensus 424 ~~t~e~i~~~~~~l 437 (470)
....++ ++++++|
T Consensus 317 ~~~~~~-~~~~~~l 329 (330)
T TIGR01140 317 PTDEEN-DRLEEAL 329 (330)
T ss_pred cCHHHH-HHHHHhh
Confidence 444444 7777665
No 207
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=1.7e-23 Score=206.32 Aligned_cols=282 Identities=17% Similarity=0.225 Sum_probs=190.0
Q ss_pred CCCCcHHHHHHHHhhhhCC--CeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcc
Q 012138 114 FYNDKFPVFAERLTSMFGY--DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 191 (470)
Q Consensus 114 ~~~~~~~~l~~~l~~~~~~--~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~ 191 (470)
|+.....++.+++++++|. ++|++++|+++++..+++.+.. +|++.|++..|+|......+...+. ..
T Consensus 54 Yp~~~~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~~---------~g~~~vli~~P~y~~y~~~~~~~G~-~~ 123 (351)
T PRK01688 54 YPECQPKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCE---------PGKDAILYCPPTYGMYSVSAETIGV-EI 123 (351)
T ss_pred CCCCChHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcC---------CCCCEEEEcCCCHHHHHHHHHHcCC-EE
Confidence 3444458899999998874 5799999999999999987654 4545888899998654332222211 11
Q ss_pred cccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEE-EccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCC
Q 012138 192 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 270 (470)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi-~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~ 270 (470)
.. .+...+ ..+ |++++++++ + ++++|+ ++| +||||.++ +.+.+++|.+.|++ +++||+||+|..|
T Consensus 124 ~~---v~~~~~-~~~---d~~~l~~~~-~---~~~lv~l~nP-nNPTG~~~-~~~~l~~l~~~~~~-~~~vivDEay~~f 189 (351)
T PRK01688 124 RT---VPTLDN-WQL---DLPAIADNL-D---GVKVVYVCSP-NNPTGNLI-NPQDLRTLLELTRG-KAIVVADEAYIEF 189 (351)
T ss_pred EE---eecCCC-CCC---CHHHHHHhc-c---CCcEEEEeCC-CCCCCCCC-CHHHHHHHHHhCCC-CcEEEEECchhhc
Confidence 10 111111 112 788888877 2 566666 666 99999999 88899999999886 6889999999987
Q ss_pred cccCCccccccCCCCcce---eecccccc-CCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh---
Q 012138 271 ARSGRMLASDWEEVRPDM---VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--- 343 (470)
Q Consensus 271 g~~G~~~~~~~~~~~pdi---~s~sK~l~-gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--- 343 (470)
....... ......+.+ -||||.++ +|+ |+|++++++++++.+... ...|+.+.+++.++.++|+.-..
T Consensus 190 ~~~~s~~--~~~~~~~n~iv~rSfSK~~glaGl-RiGy~i~~~~~i~~l~~~--~~~~~v~~~~~~~a~~~L~~~~~~~~ 264 (351)
T PRK01688 190 CPQASLA--GWLAEYPHLVILRTLSKAFALAGL-RCGFTLANEEVINLLLKV--IAPYPLSTPVADIAAQALSPQGIAAM 264 (351)
T ss_pred CCCCChH--HHHhhCCCEEEEecchHhhcCHHH-HHhHHhCCHHHHHHHHhc--cCCCCCCHHHHHHHHHHHhcchHHHH
Confidence 5221111 111112333 49999999 898 999999999999888643 23466777777777777652111
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhCCCce-EEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccC-----CCCEE
Q 012138 344 EKLAERSAHLGEELRQHLFKIQQQFPNYV-KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-----HDTIV 417 (470)
Q Consensus 344 ~~~~~~~~~~~~~l~~~L~~l~~~~p~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----~~~~i 417 (470)
.+..+.+++.++++.+.|+++ + .+ ...++.+.|+++.+. ++.++.+.|.++||.+.++ .++++
T Consensus 265 ~~~~~~~~~~r~~l~~~L~~~----~-~~~~~~ps~~nfi~~~~~------~~~~l~~~L~~~gi~vr~~~~~~~~~~~i 333 (351)
T PRK01688 265 RERVAEINANRQWLIAALKEI----P-CVEQVFDSETNYILARFT------ASSAVFKSLWDQGIILRDQNKQPGLSNCL 333 (351)
T ss_pred HHHHHHHHHHHHHHHHHHHhC----C-CCCeECCCCCcEEEEEcC------CHHHHHHHHHHCCeEEEECCCcCCCCCeE
Confidence 223344455556666666553 2 23 233556677666553 3678999999999998754 25799
Q ss_pred EEecCCCCCHHHHHHHHHHHH
Q 012138 418 RLTPPLSISSNELQEGSKALH 438 (470)
Q Consensus 418 R~~~~~~~t~e~i~~~~~~l~ 438 (470)
|+++ .+++++++++++|+
T Consensus 334 Ris~---~~~~e~~~l~~al~ 351 (351)
T PRK01688 334 RITI---GTREECQRVIDALR 351 (351)
T ss_pred EEeC---CCHHHHHHHHHhhC
Confidence 9994 47899999998873
No 208
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.92 E-value=2.2e-22 Score=202.70 Aligned_cols=330 Identities=15% Similarity=0.134 Sum_probs=214.7
Q ss_pred CCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCC-CC------CCcHHHHHHHHhhhhCC---CeEEecCChhH
Q 012138 74 GNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRA-FY------NDKFPVFAERLTSMFGY---DMVLPMNTGAE 143 (470)
Q Consensus 74 G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~-~~------~~~~~~l~~~l~~~~~~---~~v~~~~sGte 143 (470)
+..|+|..+. +..++.+.+++.+.++........ .+ .+..+++.+.++++++. ++|+||+|+++
T Consensus 23 ~~iYld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 96 (406)
T PRK09295 23 PLAYLDSAAS------AQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTE 96 (406)
T ss_pred ceEEEeCccc------ccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHH
Confidence 4578887654 225688999998888654322111 11 23355677788888863 57999999999
Q ss_pred HHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCC
Q 012138 144 GVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGD 223 (470)
Q Consensus 144 A~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~ 223 (470)
++..+++.+... .. .+|+ .|++.+..||........+.........+.+..++ ..+ |+++|++++++
T Consensus 97 ~l~~~~~~~~~~-~~----~~gd-~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~---d~~~l~~~i~~--- 163 (406)
T PRK09295 97 GINLVANSWGNS-NV----RAGD-NIIISEMEHHANIVPWQMLCARVGAELRVIPLNPD-GTL---QLETLPALFDE--- 163 (406)
T ss_pred HHHHHHHHhhhh-cC----CCcC-EEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCC-CCC---CHHHHHHhcCC---
Confidence 999888754210 00 1355 67777776554322111110000010000111011 111 78999998875
Q ss_pred CeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeec--cccccCCCcc
Q 012138 224 QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVIL--GKALGGGVIP 301 (470)
Q Consensus 224 ~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~--sK~l~gG~~~ 301 (470)
++++|++..++|++|.+.| +++|.++|+++|+++++|++|+ +|.. .+....+ .+|++++ +|.++ .. .
T Consensus 164 ~t~lv~l~~~~n~tG~~~~----~~~i~~~~~~~~~~vivD~a~~-~g~~--~~~~~~~--~~D~~~~s~~K~~g-p~-G 232 (406)
T PRK09295 164 RTRLLAITHVSNVLGTENP----LAEMIALAHQHGAKVLVDGAQA-VMHH--PVDVQAL--DCDFYVFSGHKLYG-PT-G 232 (406)
T ss_pred CcEEEEEecchhcccccCC----HHHHHHHHHHcCCEEEEEcccc-cCcc--ccCchhc--CCCEEEeehhhccC-CC-C
Confidence 7888888888999999998 9999999999999999999997 3221 1222223 3476644 59554 33 6
Q ss_pred eeEEEecHHHHhhcCcCCcc----------------------CCCCCCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHH
Q 012138 302 VSAVLADKEVMLCIQPGEHG----------------------STFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEE 356 (470)
Q Consensus 302 ig~v~~~~~~~~~~~~~~~~----------------------~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~ 356 (470)
+|++++++++++.+.+...+ ..-+.+..++.++.++++.+.+ +.+.++.+++.++
T Consensus 233 ~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~ 312 (406)
T PRK09295 233 IGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHY 312 (406)
T ss_pred cEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 89999999887766432111 1114677788888889988765 4566777778888
Q ss_pred HHHHHHHHHhhCCCceEEEe--ccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCC------------CCEEEEecC
Q 012138 357 LRQHLFKIQQQFPNYVKEVR--GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------------DTIVRLTPP 422 (470)
Q Consensus 357 l~~~L~~l~~~~p~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------------~~~iR~~~~ 422 (470)
+.+.|.++. .+.... ....++.+.++. ....++.+.|.++||.+..+. ++++|++++
T Consensus 313 l~~~l~~~~-----~~~~~~~~~~~~iv~~~~~~----~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~ 383 (406)
T PRK09295 313 ALSQLESVP-----DLTLYGPQNRLGVIAFNLGK----HHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLA 383 (406)
T ss_pred HHHHHhcCC-----CEEEeCCCCCceEEEEEECC----cCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEcc
Confidence 877776541 222221 224566665543 256788889988899987542 357999999
Q ss_pred CCCCHHHHHHHHHHHHHHHh
Q 012138 423 LSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 423 ~~~t~e~i~~~~~~l~~~l~ 442 (470)
..+|++||+.+++.|+++..
T Consensus 384 ~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 384 MYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred CCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999988754
No 209
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.92 E-value=7.8e-23 Score=208.94 Aligned_cols=304 Identities=13% Similarity=0.132 Sum_probs=192.7
Q ss_pred CCcHHHHHHHHhhhhC------CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCC
Q 012138 116 NDKFPVFAERLTSMFG------YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD 189 (470)
Q Consensus 116 ~~~~~~l~~~l~~~~~------~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~ 189 (470)
.++++.+++++.+..| .++|++|+|+++|++.++..+.. ||+ .|++..|+|.+.........+.
T Consensus 97 ~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~---------pGD-~Vlv~~P~Y~~~~~~~~~~~G~ 166 (496)
T PLN02376 97 KKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLAD---------PGD-VFLIPSPYYAAFDRDLRWRTGV 166 (496)
T ss_pred HHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCC---------CCC-EEEECCCCccchHHHHHhhCCC
Confidence 4566777777776533 46899999999999999997765 565 8889999998765433211221
Q ss_pred cccccCCCCCCC-CeeeecCCCHHHHHHHHHh---cCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEec
Q 012138 190 NEAIRGFGPLLP-GHLKVDFGDITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 265 (470)
Q Consensus 190 ~~~~~~~~~~~~-~~~~~~~~d~~~Le~~l~~---~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~De 265 (470)
..... +... +...+ |+++++++++. .+.++++|++..++||||.++ +.+.+++|+++|++||++||+||
T Consensus 167 ~vv~v---~~~~~~~~~~---~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~-s~e~l~~L~~~a~~~~i~lI~DE 239 (496)
T PLN02376 167 EIIPV---PCSSSDNFKL---TVDAADWAYKKAQESNKKVKGLILTNPSNPLGTML-DKDTLTNLVRFVTRKNIHLVVDE 239 (496)
T ss_pred EEEEE---eCCCCccCcC---CHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccC-CHHHHHHHHHHHHHcCCEEEEEc
Confidence 11110 1100 01112 68888776532 124678676444499999999 99999999999999999999999
Q ss_pred cccCCcccCCcc-cc----ccCC---CCcc----eeecccccc-CCCcceeEEEe-cHHHHhhcCcCCccCCCCCCHHHH
Q 012138 266 IQSGLARSGRML-AS----DWEE---VRPD----MVILGKALG-GGVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLAS 331 (470)
Q Consensus 266 v~~g~g~~G~~~-~~----~~~~---~~pd----i~s~sK~l~-gG~~~ig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~ 331 (470)
+|..+.+.+..+ .. ..++ ..++ +.+|||.++ +|+ |+|++++ ++.+.+.++... .....+.+.+
T Consensus 240 iY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGl-RvG~li~~~~~l~~~~~~~~--~~~~vs~~~Q 316 (496)
T PLN02376 240 IYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGF-RVGIVYSFNDSVVSCARKMS--SFGLVSSQTQ 316 (496)
T ss_pred CccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcc-eEEEEEECCHHHHHHHHHHh--hcCCCCHHHH
Confidence 999865554322 11 0001 1233 238999997 999 9999998 566665543221 1223566677
Q ss_pred HHHHHHHHHH---hh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccc-eeEEEEeccC----CCchhHHHHHHH
Q 012138 332 AVAIASLDVI---RD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG-LFNAVEFDKT----ALPVSAYDICLK 401 (470)
Q Consensus 332 aaa~a~l~~~---~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g-~~~~~~~~~~----~~~~~~~~~~~~ 401 (470)
.++.+.|+.- ++ ...+++++++.+.+.+.|++. .+....+.| .|+++.+... .......++++.
T Consensus 317 ~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~------gi~~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ 390 (496)
T PLN02376 317 LMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA------DIACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHI 390 (496)
T ss_pred HHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC------CCcccCCCceEEEEEEchhhhccCCchhHHHHHHHH
Confidence 6666555321 11 112333444445555555442 233344555 5565555321 101123678888
Q ss_pred HHHc-CceeccCC------CCEEEEecCCCCCHHHHHHHHHHHHHHHhcccCC
Q 012138 402 MKER-GILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 447 (470)
Q Consensus 402 l~~~-Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~ 447 (470)
|.++ ||.+.|+. ++++|+++.. .+++++++++++|.+++. +.+.
T Consensus 391 ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~-~~~~~l~~al~rl~~~l~-~~~~ 441 (496)
T PLN02376 391 IIDKVKLNVSPGSSFRCTEPGWFRICFAN-MDDDTLHVALGRIQDFVS-KNKN 441 (496)
T ss_pred HHHcCCEEEeCccccCCCCCCEEEEEeeC-CCHHHHHHHHHHHHHHHH-Hhhh
Confidence 8875 99999863 5799999532 578999999999999997 5544
No 210
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.92 E-value=6e-24 Score=215.43 Aligned_cols=339 Identities=12% Similarity=0.127 Sum_probs=197.8
Q ss_pred eEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhh-hh-C------CCeEEecCChhHHHHH
Q 012138 76 KYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTS-MF-G------YDMVLPMNTGAEGVET 147 (470)
Q Consensus 76 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~-~------~~~v~~~~sGteA~~~ 147 (470)
.++|+..|.... ..++.+.+ +.+.+....+.......++++++++++.+ .. + .++|++|+|+++|+..
T Consensus 101 ~~i~l~~g~p~~---~~~~~v~e-~~~~~~~~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~ 176 (527)
T PRK09275 101 DAVSYVRDQLGF---DADEFVYE-LVDGIIGDNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCY 176 (527)
T ss_pred HHHhhcCCCCCC---CCCHHHHH-HHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHH
Confidence 345666553322 25555656 55655432222222334556666664432 21 1 2379999999999999
Q ss_pred HHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCC-CeeeecCCCHHHHHHHHHhcCCCeE
Q 012138 148 ALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLP-GHLKVDFGDITALEKIFKESGDQIA 226 (470)
Q Consensus 148 al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~Le~~l~~~~~~~~ 226 (470)
++.++...+.. .+|| .|++..|+|................. ..+..+ +.+.+ |+++|+++++. +++
T Consensus 177 ~~~aL~~~~ll----~pGD-~Vlv~~P~y~~Y~~~~~l~g~~~~~v--~v~~~~~~~f~~---d~~~l~~~~~~---~tk 243 (527)
T PRK09275 177 IFDSLKENGLL----KAGD-KIALMTPIFTPYLEIPELPRYDLEVV--HINADEENEWQY---PDSELEKLRDP---SIK 243 (527)
T ss_pred HHHHHhhhhcC----CCCC-EEEEeCCChHHHHHHHHHcCCCeEEE--EeecCcccCCCC---CHHHHHhhcCC---CCC
Confidence 88853210111 1565 88889999866543322221111000 000000 11122 78899887765 788
Q ss_pred EEEEccccCCCccccCChhhHHHHHHHHHh--cCcEEEEeccccCCcccCCcccc-ccC-CCCcceeecccccc-CCCcc
Q 012138 227 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSK--YNILMIADEIQSGLARSGRMLAS-DWE-EVRPDMVILGKALG-GGVIP 301 (470)
Q Consensus 227 ~vi~epi~n~~G~~~~~~~~l~~l~~l~~~--~gillI~Dev~~g~g~~G~~~~~-~~~-~~~pdi~s~sK~l~-gG~~~ 301 (470)
+|+++.++||||.++ +++.+++|+++|++ +|++||+||+|..|.. ..... ... ....-+-||||.++ +|+ |
T Consensus 244 ai~l~nP~NPTG~v~-s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~--~~~s~~~~~~~~~I~v~SfSK~f~mtG~-R 319 (527)
T PRK09275 244 ALFLVNPSNPPSVAM-SDESLEKIADIVNEKRPDLMIITDDVYGTFVD--DFRSLFAVLPYNTILVYSFSKYFGATGW-R 319 (527)
T ss_pred EEEEeCCcCCcCCCC-CHHHHHHHHHHHHhcCCCcEEEECCCChhhcc--cccCHHHhCCCCEEEEeehhhhccCcHh-H
Confidence 888544499999999 99999999999964 5999999999997743 11111 111 11122349999998 899 9
Q ss_pred eeEEEecHH-----HHhhc--------------------------------CcCCccCCCCCCHHHHHH-HH----HHHH
Q 012138 302 VSAVLADKE-----VMLCI--------------------------------QPGEHGSTFGGNPLASAV-AI----ASLD 339 (470)
Q Consensus 302 ig~v~~~~~-----~~~~~--------------------------------~~~~~~~t~~~~~~~~aa-a~----a~l~ 339 (470)
+||++++++ +++.+ +......+.+.+.+.+.+ +. +.|+
T Consensus 320 lG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~ 399 (527)
T PRK09275 320 LGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLD 399 (527)
T ss_pred HhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHh
Confidence 999999876 43333 122223445555555443 32 2232
Q ss_pred HHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC---------------chhHHHHHHHH
Q 012138 340 VIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL---------------PVSAYDICLKM 402 (470)
Q Consensus 340 ~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~---------------~~~~~~~~~~l 402 (470)
.-.+ +..++.++++.+.+.+.| +. .+....+.|.|+.| ++.... ..+..+++.+|
T Consensus 400 ~~~~~~~~~~~~~~~Rr~~l~~~L---g~----~~~~~~p~g~fY~~-~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~L 471 (527)
T PRK09275 400 EEDAYKKAMKDIIRRRYKALYEGL---GL----PEPEDPNNAAYYTL-IDLEEWAEKNYGKEFADYLKKNYSPVDLLFRL 471 (527)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHc---CC----CCcCCCCCeeEEEE-EEhHHhhhhccCchhhhhhhccCCHHHHHHHH
Confidence 1111 223344444444443333 11 12223567777666 332110 12467788888
Q ss_pred HHc-CceeccCC-----CCEEEEecCCC-CCHHHHHHHHHHHHHHHhcccC
Q 012138 403 KER-GILAKPTH-----DTIVRLTPPLS-ISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 403 ~~~-Gv~~~~~~-----~~~iR~~~~~~-~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
.++ ||.+.||. .+++|++ +. .+++++.++.++|.++++ +..
T Consensus 472 l~e~gV~v~PG~~Fg~~~~~vRis--~a~~~~~~~~~~~~rl~~~l~-~y~ 519 (527)
T PRK09275 472 AEETGVVLLPGGGFGGPEWSVRVS--LANLNEEDYAKIGKAIRKLLD-EYY 519 (527)
T ss_pred HhcCCEEEeCchhhCCCCCeEEEE--EecCCHHHHHHHHHHHHHHHH-HHH
Confidence 766 99998873 4689999 55 688999999999999998 654
No 211
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.92 E-value=1.2e-22 Score=202.41 Aligned_cols=312 Identities=16% Similarity=0.191 Sum_probs=206.1
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCC-------CCcHHHHHHHHhhhhCCC---eEEecCChhHHHHHHHHHHHHhchh
Q 012138 89 QGHCHPKIMKALQEQAEKLTLSSRAFY-------NDKFPVFAERLTSMFGYD---MVLPMNTGAEGVETALKLARKWGYV 158 (470)
Q Consensus 89 lG~~~p~v~~a~~~~~~~~~~~~~~~~-------~~~~~~l~~~l~~~~~~~---~v~~~~sGteA~~~al~~~~~~~~~ 158 (470)
.|..++.+.+++.+.++.....+.... .....++.+.++++++.+ ++++++|+++|+..++..+...
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~--- 84 (373)
T cd06453 8 TSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRA--- 84 (373)
T ss_pred ccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhc---
Confidence 344678999999888865533221111 123456778888888755 7999999999999999876530
Q ss_pred cccCCCCCcEEEEEccCccccccc---hhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccC
Q 012138 159 KKKFSIDEAIIVSCCGCFHGRTLA---AISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQG 235 (470)
Q Consensus 159 ~~~~~~g~~~ii~~~~~yhg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n 235 (470)
..+|+ .|++.+++|.+.... .....+. ...+.+... ...+ |++++++.+++ ++++|++..++|
T Consensus 85 ---~~~g~-~vl~~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~-~~~~---d~~~l~~~l~~---~~~~v~~~~~~~ 150 (373)
T cd06453 85 ---NKPGD-EIVTSVMEHHSNIVPWQQLAERTGA---KLKVVPVDD-DGQL---DLEALEKLLTE---RTKLVAVTHVSN 150 (373)
T ss_pred ---CCCCC-EEEECcchhHHHHHHHHHHHhhcCc---EEEEeecCC-CCCc---CHHHHHHHhcC---CceEEEEeCccc
Confidence 00244 677766664332111 1111111 100111100 0112 89999999976 788888877799
Q ss_pred CCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecc--ccccCCCcceeEEEecHHHHh
Q 012138 236 EAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVML 313 (470)
Q Consensus 236 ~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~s--K~l~gG~~~ig~v~~~~~~~~ 313 (470)
|+|.+.| +++|.++|++||++|++|++|+ ++.. . .+.....+|++++| |.+++ . ++|++++++++++
T Consensus 151 ~tG~~~~----~~~i~~~~~~~~~~li~D~a~~-~~~~--~--~~~~~~~~d~~~~s~~K~~~~-~-g~g~~~~~~~~~~ 219 (373)
T cd06453 151 VLGTINP----VKEIGEIAHEAGVPVLVDGAQS-AGHM--P--VDVQDLGCDFLAFSGHKMLGP-T-GIGVLYGKEELLE 219 (373)
T ss_pred ccCCcCC----HHHHHHHHHHcCCEEEEEhhhh-cCce--e--eeccccCCCEEEeccccccCC-C-CcEEEEEchHHhh
Confidence 9999998 9999999999999999999987 2211 1 11122346888777 99887 5 8899999999888
Q ss_pred hcCcCCccC------------------CC---CCCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhCC
Q 012138 314 CIQPGEHGS------------------TF---GGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFP 369 (470)
Q Consensus 314 ~~~~~~~~~------------------t~---~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~p 369 (470)
.+.+...+. .| +.+..+..+..++++.+.+ +.+.++.+++.+++.+.|+++.
T Consensus 220 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~---- 295 (373)
T cd06453 220 EMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIP---- 295 (373)
T ss_pred cCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCC----
Confidence 776532111 11 3455566666677877765 3455666667777777666541
Q ss_pred CceEEE---eccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCC------------CCEEEEecCCCCCHHHHHHHH
Q 012138 370 NYVKEV---RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------------DTIVRLTPPLSISSNELQEGS 434 (470)
Q Consensus 370 ~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------------~~~iR~~~~~~~t~e~i~~~~ 434 (470)
.+..+ ...+.++.+.+.. .+..++.+.|.++||.+.++. .+++|++++..+|++|+++++
T Consensus 296 -~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~ 370 (373)
T cd06453 296 -GVRVYGDAEDRAGVVSFNLEG----IHPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALV 370 (373)
T ss_pred -CeEEeCCccccCCeEEEEECC----cCHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHH
Confidence 22222 2346677776543 257789999999999986432 568999999999999999999
Q ss_pred HHH
Q 012138 435 KAL 437 (470)
Q Consensus 435 ~~l 437 (470)
+.|
T Consensus 371 ~~l 373 (373)
T cd06453 371 EAL 373 (373)
T ss_pred hhC
Confidence 864
No 212
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.92 E-value=4e-22 Score=199.16 Aligned_cols=321 Identities=16% Similarity=0.127 Sum_probs=209.2
Q ss_pred ccCCCCCHHHHHHHHHHHHHccccCC------CCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcc
Q 012138 87 VNQGHCHPKIMKALQEQAEKLTLSSR------AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKK 160 (470)
Q Consensus 87 ~~lG~~~p~v~~a~~~~~~~~~~~~~------~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~ 160 (470)
.-+|..++.+++++.+.......++. ....+...++++.+++++|.+.+++++|+++|+..++..+..
T Consensus 27 ~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~~~~~~~g~t~a~~~al~~l~~------ 100 (387)
T PRK09331 27 QRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMDEARVTHGAREGKFAVMHSLCK------ 100 (387)
T ss_pred hcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcC------
Confidence 44677889999999998754322111 112446789999999999999999999999999999987754
Q ss_pred cCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecC-------CCHHHHHHHHHhc----CCCeEEEE
Q 012138 161 KFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF-------GDITALEKIFKES----GDQIAGFL 229 (470)
Q Consensus 161 ~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~Le~~l~~~----~~~~~~vi 229 (470)
+|+ .|++..++ |.+...++...+.. ...++. .|++++++.++++ .+++++|+
T Consensus 101 ---~gd-~Vlv~~~~-h~s~~~~~~~~G~~------------~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~ 163 (387)
T PRK09331 101 ---KGD-YVVLDGLA-HYTSYVAAERAGLN------------VREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALAL 163 (387)
T ss_pred ---CCC-EEEECCCc-hHHHHHHHHHcCCE------------EEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEE
Confidence 455 66666665 43333333322211 112221 2799999999753 23688888
Q ss_pred EccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecH
Q 012138 230 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADK 309 (470)
Q Consensus 230 ~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~ 309 (470)
++.+++++|.+.| +++|.++|++||+++|+|++|+ +|.. .+....++++..+.+++|+++++. ++|++++++
T Consensus 164 l~~~~~~tG~~~~----l~~I~~la~~~g~~livD~a~~-~g~~--~~~~~~~g~D~~~~s~~K~l~~~~-~~G~l~~~~ 235 (387)
T PRK09331 164 LTHVDGNYGNLAD----AKKVAKVAHEYGIPFLLNGAYT-VGRM--PVDGKKLGADFIVGSGHKSMAASA-PSGVLATTE 235 (387)
T ss_pred EECCCCCCccccc----HHHHHHHHHHcCCEEEEECCcc-cCCc--CCCHHHcCCCEEEeeCcccccCCC-CEEEEEECH
Confidence 8887999999998 9999999999999999999998 2211 112233455444558889999776 999999999
Q ss_pred HHHhhcCcCCccC------CCC--CCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEE---ec
Q 012138 310 EVMLCIQPGEHGS------TFG--GNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEV---RG 377 (470)
Q Consensus 310 ~~~~~~~~~~~~~------t~~--~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~---~~ 377 (470)
++++.+....... .++ ..+...+++.++++.+.+ .+..++..++.+++++.|.++. .+... ..
T Consensus 236 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~l~-----g~~~~~~~~~ 310 (387)
T PRK09331 236 EYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEKIE-----GFKQLGEKPR 310 (387)
T ss_pred HHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----CEEEeccCcC
Confidence 9888765421100 011 222334444555655443 2233444556667777777651 22222 22
Q ss_pred cceeEEEEeccC-----CCchhHHHHHHHHHHcCceec-cCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 378 RGLFNAVEFDKT-----ALPVSAYDICLKMKERGILAK-PTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 378 ~g~~~~~~~~~~-----~~~~~~~~~~~~l~~~Gv~~~-~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
...+..+....- .....+.++.+.|+++||... ++....+|+.. ..+|++++++++++|+++++ ++
T Consensus 311 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~i~ri~~-~g~t~~di~~l~~aL~~i~~-~~ 382 (387)
T PRK09331 311 NHDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIHGIKPGATKEFKLST-YGLTWEQVEYVADAFKEIAE-KY 382 (387)
T ss_pred cCCeEEEeCCchhHHhhhccccchhHHHHHHHcCceEEccCCceEEEEEe-ccCCHHHHHHHHHHHHHHHH-hc
Confidence 233444432210 001234679999999999854 44455566654 45899999999999999988 64
No 213
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.92 E-value=2e-22 Score=201.29 Aligned_cols=319 Identities=17% Similarity=0.184 Sum_probs=204.0
Q ss_pred CCHHHHHHHHHHHHHccccCCCCC------CCcHHHHHHHHhhhhCC--CeEEecCChhHHHHHHHHHHHHhchhcccCC
Q 012138 92 CHPKIMKALQEQAEKLTLSSRAFY------NDKFPVFAERLTSMFGY--DMVLPMNTGAEGVETALKLARKWGYVKKKFS 163 (470)
Q Consensus 92 ~~p~v~~a~~~~~~~~~~~~~~~~------~~~~~~l~~~l~~~~~~--~~v~~~~sGteA~~~al~~~~~~~~~~~~~~ 163 (470)
.++.+.+++.+.+.....++...+ .+..+++++++++++|. +.++|++||+++++.+++.+....
T Consensus 11 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~------- 83 (379)
T TIGR03402 11 VDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQ------- 83 (379)
T ss_pred CCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhc-------
Confidence 678999999988765322211111 22355677888888874 469999999999999998764310
Q ss_pred CCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCC
Q 012138 164 IDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPP 243 (470)
Q Consensus 164 ~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~ 243 (470)
++++.|++....|++.......+.. .+....+.+...+ ..+ |++++++++++ +++++++..++|++|.+.|
T Consensus 84 ~~~~~vv~~~~~~~s~~~~~~~~~~-~G~~v~~v~~~~~-g~~---~~~~l~~~i~~---~~~lv~i~~~~n~tG~~~~- 154 (379)
T TIGR03402 84 PEKRHIITTAVEHPAVLSLCQHLEK-QGYKVTYLPVDEE-GRL---DLEELRAAITD---DTALVSVMWANNETGTIFP- 154 (379)
T ss_pred CCCCeEEEcccccHHHHHHHHHHHH-cCCEEEEEccCCC-CcC---CHHHHHHhcCC---CcEEEEEEcccCCeeeccc-
Confidence 2334677766665432211111100 1111111111111 112 78999999875 7888888878999999998
Q ss_pred hhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecc--ccccCCCcceeEEEecHHHHhhcCcCCcc
Q 012138 244 DGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEHG 321 (470)
Q Consensus 244 ~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~s--K~l~gG~~~ig~v~~~~~~~~~~~~~~~~ 321 (470)
+++|.++|++||+++|+|++|+ +|.. . ++.....+|++++| | +.|.. .+|+++.+++.. +.+...+
T Consensus 155 ---~~~I~~l~~~~g~~vivD~~~~-~g~~--~--~~~~~~~~D~~~~s~~K-~~gp~-G~g~l~v~~~~~--~~p~~~g 222 (379)
T TIGR03402 155 ---IEEIGEIAKERGALFHTDAVQA-VGKI--P--IDLKEMNIDMLSLSGHK-LHGPK-GVGALYIRKGTR--FRPLLRG 222 (379)
T ss_pred ---HHHHHHHHHHcCCEEEEECccc-cccc--c--cCcccCCCCEEEEcHHH-cCCCC-ceEEEEECCCCC--CCCcccC
Confidence 8999999999999999999997 3211 1 22223456888888 9 55544 788888876542 2222111
Q ss_pred -------CCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEec---c-ceeEEEEecc
Q 012138 322 -------STFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG---R-GLFNAVEFDK 388 (470)
Q Consensus 322 -------~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~---~-g~~~~~~~~~ 388 (470)
...+.+..+..+..++++.+.+ +.+.++.+++.+++++.|.+ ..| .+..... . +..+.+.+..
T Consensus 223 ~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~---~~~-~~~~~~~~~~~~~~~~~~~~~~ 298 (379)
T TIGR03402 223 GHQERGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLA---RIP-DARLNGDPTKRLPNTVNISFEY 298 (379)
T ss_pred CccCCCcCCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh---hCC-CEEEeCCCccCCCCEEEEEecC
Confidence 1224566777777778877654 34445666667777766654 122 2221111 1 2233333432
Q ss_pred CCCchhHHHHHHHHHHcCceeccCC-----------------------CCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 389 TALPVSAYDICLKMKERGILAKPTH-----------------------DTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 389 ~~~~~~~~~~~~~l~~~Gv~~~~~~-----------------------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
. ++.++...|.++||.+.++. .+.+|++++..+|++||+++++.|+++++ ++
T Consensus 299 ~----~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~-~~ 373 (379)
T TIGR03402 299 I----EGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIA-RL 373 (379)
T ss_pred C----CHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHH-HH
Confidence 2 56789999988899987542 36899999999999999999999999998 75
Q ss_pred CC
Q 012138 446 PK 447 (470)
Q Consensus 446 ~~ 447 (470)
++
T Consensus 374 ~~ 375 (379)
T TIGR03402 374 RA 375 (379)
T ss_pred Hh
Confidence 53
No 214
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.92 E-value=4e-22 Score=197.29 Aligned_cols=329 Identities=19% Similarity=0.225 Sum_probs=229.2
Q ss_pred CeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCC-------CCCcHHHHHHHHhhhhCC---CeEEecCChhHH
Q 012138 75 NKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAF-------YNDKFPVFAERLTSMFGY---DMVLPMNTGAEG 144 (470)
Q Consensus 75 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~-------~~~~~~~l~~~l~~~~~~---~~v~~~~sGteA 144 (470)
--|+|..++ ++.+..|.+++.+....+.-..... .....++.++.++++.+. +.|+||.+.|+|
T Consensus 23 ~vylD~aa~------~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~a 96 (405)
T COG0520 23 LVYLDNAAT------SQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEA 96 (405)
T ss_pred eEEecCccc------ccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHH
Confidence 357776554 2257889999999887654332211 123456777788888863 569999999999
Q ss_pred HHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCC
Q 012138 145 VETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQ 224 (470)
Q Consensus 145 ~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~ 224 (470)
+..+....... ..+|+ .||+....+|........+....+.+..+.+.. +...+ ++++++..+++ +
T Consensus 97 ln~va~~l~~~------~~~gd-eIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~-~~g~~---~~~~~~~~i~~---~ 162 (405)
T COG0520 97 LNLVARGLGRS------LKPGD-EIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLD-DDGLL---DLDALEKLITP---K 162 (405)
T ss_pred HHHHHHHhhhh------hcCCC-EEEEccCcchhhHHHHHHHHHhcCcEEEEEecC-CCCCc---CHHHHHHhcCC---C
Confidence 99988866321 11565 677766666776655544443222222222221 11122 68889987776 8
Q ss_pred eEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecc--ccccCCCcce
Q 012138 225 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGGGVIPV 302 (470)
Q Consensus 225 ~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~s--K~l~gG~~~i 302 (470)
|++|.+..+.|.+|.+.| +++|.++||++|+++++|.+|+ . |.. ..+...+..|+..|| |++.|.- .+
T Consensus 163 Tklvais~vSn~tG~~~p----v~~I~~la~~~ga~v~VDaaq~-~---~h~-~idv~~l~~Df~afsgHKwl~gP~-Gi 232 (405)
T COG0520 163 TKLVALSHVSNVTGTVNP----VKEIAELAHEHGALVLVDAAQA-A---GHL-PIDVQELGCDFLAFSGHKWLLGPT-GI 232 (405)
T ss_pred ceEEEEECccccccccch----HHHHHHHHHHcCCEEEEECccc-c---Ccc-CCCchhcCCCEEEEcccccccCCC-ce
Confidence 999999999999999999 9999999999999999999998 1 111 123233455888777 8777765 88
Q ss_pred eEEEecHHHHhhcCcCCccC------------CC----------CCCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHH
Q 012138 303 SAVLADKEVMLCIQPGEHGS------------TF----------GGNPLASAVAIASLDVIRD---EKLAERSAHLGEEL 357 (470)
Q Consensus 303 g~v~~~~~~~~~~~~~~~~~------------t~----------~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l 357 (470)
|++++++++.+.+.|...+. ++ +.|........++++.+++ +.+.++.+++.+++
T Consensus 233 GvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~ 312 (405)
T COG0520 233 GVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYL 312 (405)
T ss_pred EEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 99999999999886532111 11 2455566666677887765 56777888888888
Q ss_pred HHHHHHHHhhCCCceEEEe----ccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCC------------CCEEEEec
Q 012138 358 RQHLFKIQQQFPNYVKEVR----GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------------DTIVRLTP 421 (470)
Q Consensus 358 ~~~L~~l~~~~p~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------------~~~iR~~~ 421 (470)
.+.|.++. .+.... .++.++.+.++. ..+.++...|.++||.+..++ ...+|+++
T Consensus 313 ~~~L~~~~-----~v~i~g~~~~~r~~~vsF~v~~----~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~ 383 (405)
T COG0520 313 LEGLSELP-----GVEIYGPPDADRGGIVSFNVKG----IHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASL 383 (405)
T ss_pred HHHHhcCC-----CeEEecCCcccCceEEEEEeCC----CCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEE
Confidence 88887753 232221 357777776664 368899999999998887653 23399999
Q ss_pred CCCCCHHHHHHHHHHHHHHHh
Q 012138 422 PLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 422 ~~~~t~e~i~~~~~~l~~~l~ 442 (470)
.+.+|+|||+++++.|+++.+
T Consensus 384 ~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 384 HLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred eecCCHHHHHHHHHHHHHHhh
Confidence 999999999999999998763
No 215
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.91 E-value=5.7e-22 Score=199.67 Aligned_cols=327 Identities=15% Similarity=0.161 Sum_probs=212.8
Q ss_pred eEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCC--C-----CCCcHHHHHHHHhhhhCC---CeEEecCChhHHH
Q 012138 76 KYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRA--F-----YNDKFPVFAERLTSMFGY---DMVLPMNTGAEGV 145 (470)
Q Consensus 76 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~--~-----~~~~~~~l~~~l~~~~~~---~~v~~~~sGteA~ 145 (470)
.|+|..+. |..++.+.+++.+.++.....+.. . .....+++.+.++++++. +.+++++|+++++
T Consensus 20 ~yld~~~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l 93 (403)
T TIGR01979 20 VYLDSAAT------SQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESI 93 (403)
T ss_pred EEEeCccc------cCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHH
Confidence 57775433 335688999988877653222111 1 112345777888888874 4799999999999
Q ss_pred HHHHHHHHHhchhcccCCCCCcEEEEEccCccccccch---hcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcC
Q 012138 146 ETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAA---ISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG 222 (470)
Q Consensus 146 ~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~ 222 (470)
..++..+... . .++|+ .|++.++.|++..... ....+.... +.+...+ ..+ |++++++.+++
T Consensus 94 ~~~~~~~~~~-~----~~~g~-~vl~~~~~~~s~~~~~~~~~~~~g~~~~---~v~~~~~-~~~---~~~~l~~~i~~-- 158 (403)
T TIGR01979 94 NLVAYSWGDS-N----LKAGD-EIVISEMEHHANIVPWQLLAERTGATLK---FIPLDDD-GTL---DLDDLEKLLTE-- 158 (403)
T ss_pred HHHHHHhhhh-c----CCCCC-EEEECcchhhHHHHHHHHHHHhcCcEEE---EEecCCC-CCC---CHHHHHHHhcc--
Confidence 8888765310 0 01344 6777676654322111 111111100 0111000 111 78999998875
Q ss_pred CCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCccee--eccccccCCCc
Q 012138 223 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGGGVI 300 (470)
Q Consensus 223 ~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~--s~sK~l~gG~~ 300 (470)
++++|++..++|++|.+.| +++|.++|++||+++|+|++|+ ++.. ......+ .+|++ +++|.++ +.
T Consensus 159 -~~~lv~~~~~~~~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~g~~--~~~~~~~--~~d~~~~s~~K~~g-p~- 226 (403)
T TIGR01979 159 -KTKLVAITHVSNVLGTVNP----VEEIAKLAHQVGAKVLVDGAQA-VPHM--PVDVQAL--DCDFYVFSGHKMYG-PT- 226 (403)
T ss_pred -CCeEEEEEcccccccccCC----HHHHHHHHHHcCCEEEEEchhh-cCcc--ccCcccc--CCCEEEEecccccC-CC-
Confidence 7888888777999999998 9999999999999999999997 2211 1122223 34665 6669765 33
Q ss_pred ceeEEEecHHHHhhcCcCCccC------------------CC---CCCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHH
Q 012138 301 PVSAVLADKEVMLCIQPGEHGS------------------TF---GGNPLASAVAIASLDVIRD---EKLAERSAHLGEE 356 (470)
Q Consensus 301 ~ig~v~~~~~~~~~~~~~~~~~------------------t~---~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~ 356 (470)
.+|++++++++.+.+.+...+. .| +.+..+++++.++++.+.+ +.+.++..++.++
T Consensus 227 G~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~ 306 (403)
T TIGR01979 227 GIGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAY 306 (403)
T ss_pred CceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 6789999998887765321110 01 3456677777778877654 4567777888888
Q ss_pred HHHHHHHHHhhCCCceEEEe-----ccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCC------------CCEEEE
Q 012138 357 LRQHLFKIQQQFPNYVKEVR-----GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------------DTIVRL 419 (470)
Q Consensus 357 l~~~L~~l~~~~p~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------------~~~iR~ 419 (470)
+.+.|+++. .+.... ..+.++.+.+.. .+..++.+.|.++||.+.++. .+++|+
T Consensus 307 l~~~l~~~~-----g~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRi 377 (403)
T TIGR01979 307 ALERLGEIP-----GLRIYGPRDAEDRGGIISFNVEG----VHPHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRA 377 (403)
T ss_pred HHHHHhcCC-----CEEEeCCCCccccCceEEEEeCC----cCHHHHHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEE
Confidence 877776641 233222 236677776643 246788899999999987542 578999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 420 TPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 420 ~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
+++..+|++|++++++.|+++++ .+
T Consensus 378 S~~~~~t~~di~~l~~~l~~~~~-~~ 402 (403)
T TIGR01979 378 SFYIYNTEEDIDALVEALKKVRK-FF 402 (403)
T ss_pred EeccCCCHHHHHHHHHHHHHHHH-Hh
Confidence 99999999999999999999887 54
No 216
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.91 E-value=5.2e-22 Score=197.80 Aligned_cols=311 Identities=16% Similarity=0.112 Sum_probs=204.1
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCC--CCcHHHHHHHHhhhhCCC--eEEecCChhHHHHHHHHHHHHhchhcccCCCCC
Q 012138 91 HCHPKIMKALQEQAEKLTLSSRAFY--NDKFPVFAERLTSMFGYD--MVLPMNTGAEGVETALKLARKWGYVKKKFSIDE 166 (470)
Q Consensus 91 ~~~p~v~~a~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~--~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~ 166 (470)
+++|.+++++.++++.....+..+. .....++++++++++|.+ .+++++||++|+..+++.++.... .++
T Consensus 31 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~------~~~ 104 (371)
T PRK13520 31 EPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAK------AEK 104 (371)
T ss_pred CchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhcc------CCC
Confidence 3789999999998875322222222 223467888999988864 578999999999999988765210 123
Q ss_pred cEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecC-----CCHHHHHHHHHhcCCCeEEEEEccccCCCcccc
Q 012138 167 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF-----GDITALEKIFKESGDQIAGFLFEPIQGEAGVII 241 (470)
Q Consensus 167 ~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~ 241 (470)
+.|++.++++ ..........+.. +..+|. .|+++|++++++ ++++|++...+|++|.+.
T Consensus 105 ~~vl~~~~~h-~s~~~~~~~~g~~------------~~~v~~~~~~~~d~~~l~~~i~~---~~~~vi~~~~~~~tG~~~ 168 (371)
T PRK13520 105 PNIVVPESAH-FSFDKAADMLGVE------------LRRAPLDDDYRVDVKAVEDLIDD---NTIGIVGIAGTTELGQVD 168 (371)
T ss_pred ceEEecCcch-HHHHHHHHHcCce------------EEEecCCCCCcCCHHHHHHHHhh---CCEEEEEEcCCcCCcccC
Confidence 3677766664 3322222222211 112221 289999999986 566566333478999999
Q ss_pred CChhhHHHHHHHHHhcCcEEEEeccccCCc----ccCCccccccCCCCcceeec--cccccCCCcceeEEEe-cHHHHhh
Q 012138 242 PPDGYLKAVRDLCSKYNILMIADEIQSGLA----RSGRMLASDWEEVRPDMVIL--GKALGGGVIPVSAVLA-DKEVMLC 314 (470)
Q Consensus 242 ~~~~~l~~l~~l~~~~gillI~Dev~~g~g----~~G~~~~~~~~~~~pdi~s~--sK~l~gG~~~ig~v~~-~~~~~~~ 314 (470)
| +++|.++|++||+++++|++|+++. +.+..+.....+ .|.+++ .|...+|. |+|+++. ++++++.
T Consensus 169 ~----l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~--vd~~~~s~~K~~~a~~-~~G~~~~~~~~~~~~ 241 (371)
T PRK13520 169 P----IPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPG--VDSITIDPHKMGLAPI-PAGGILFRDESYLDA 241 (371)
T ss_pred C----HHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCC--CceEEECCccccCccC-CceEEEEcCHHHHHh
Confidence 8 9999999999999999999998643 111112222223 355544 36544566 8888775 5557666
Q ss_pred cCcCC---cc-C----CCCCCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCceE-EEeccceeE
Q 012138 315 IQPGE---HG-S----TFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVK-EVRGRGLFN 382 (470)
Q Consensus 315 ~~~~~---~~-~----t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~-~~~~~g~~~ 382 (470)
+.... .+ . ..+.++..++++.++++.+.+ +++.++..++++++.+.|++++ +. ...+...++
T Consensus 242 l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g------~~~~~~~~~~~v 315 (371)
T PRK13520 242 LAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKERG------FEPVIEPVLNIV 315 (371)
T ss_pred hcccCccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhCC------CEEecCCCceEE
Confidence 53210 00 0 011234567777788887654 3467778888888888887652 22 223445566
Q ss_pred EEEeccCCCchhHHHHHHHHHHcCceeccCC-CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 383 AVEFDKTALPVSAYDICLKMKERGILAKPTH-DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
.+.+. +..++.+.|.++||.+.++. .+++|++++..+|++|++++++.|+++++
T Consensus 316 ~~~~~------~~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 316 AFDDP------NPDEVREKLRERGWRVSVTRCPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred EEecC------CHHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 65443 46789999999999998764 56899998888999999999999998875
No 217
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.91 E-value=1.7e-22 Score=200.07 Aligned_cols=313 Identities=17% Similarity=0.156 Sum_probs=204.2
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCC---eEEecCChhHHHHHHHHHHHHhchhcccCCCCCcE
Q 012138 92 CHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYD---MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAI 168 (470)
Q Consensus 92 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~---~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ 168 (470)
.++++.+++.+.+.. +.+. ...+..+++++.+++++|.+ .+++++||++|+..+++.+.. +|+ .
T Consensus 10 ~~~~v~~a~~~~~~~--~~~~-~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~---------~g~-~ 76 (356)
T cd06451 10 VPPRVLKAMNRPMLG--HRSP-EFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLE---------PGD-K 76 (356)
T ss_pred CCHHHHHHhCCCccC--CCCH-HHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCC---------CCC-E
Confidence 457788877544321 1100 12234678889999998752 478999999999999986643 465 5
Q ss_pred EEEEccCccccc-cchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhH
Q 012138 169 IVSCCGCFHGRT-LAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYL 247 (470)
Q Consensus 169 ii~~~~~yhg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l 247 (470)
|++..+++++.. .......+.. ..+.+..++ . ..|++++++.++++ ++++|++..++|++|.+.| +
T Consensus 77 vl~~~~~~~~~~~~~~~~~~g~~---~~~v~~~~~-~---~~~~~~l~~~i~~~--~~~~v~i~~~~~~~G~~~~----~ 143 (356)
T cd06451 77 VLVGVNGVFGDRWADMAERYGAD---VDVVEKPWG-E---AVSPEEIAEALEQH--DIKAVTLTHNETSTGVLNP----L 143 (356)
T ss_pred EEEecCCchhHHHHHHHHHhCCC---eEEeecCCC-C---CCCHHHHHHHHhcc--CCCEEEEeccCCCcccccC----H
Confidence 666655544421 1111111211 111111110 1 22899999999753 6778876666999999998 9
Q ss_pred HHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCccee--eccccccCCCcceeEEEecHHHHhhcCc--CCc---
Q 012138 248 KAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQP--GEH--- 320 (470)
Q Consensus 248 ~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~--s~sK~l~gG~~~ig~v~~~~~~~~~~~~--~~~--- 320 (470)
++|.++|++||+++++|++|+ +|.. .+....++ +|++ +.+|.++++. ++|+++.++++++.+.. ...
T Consensus 144 ~~i~~~a~~~~~~li~D~~~~-~g~~--~~~~~~~~--~d~~~~s~~K~l~~p~-g~G~l~~~~~~~~~~~~~~~~~~~~ 217 (356)
T cd06451 144 EGIGALAKKHDALLIVDAVSS-LGGE--PFRMDEWG--VDVAYTGSQKALGAPP-GLGPIAFSERALERIKKKTKPKGFY 217 (356)
T ss_pred HHHHHHHHhcCCEEEEeeehh-ccCc--cccccccC--ccEEEecCchhccCCC-CcceeEECHHHHHHHHhcCCCCcee
Confidence 999999999999999999987 3321 12222233 3554 5579999776 88999999998877642 111
Q ss_pred --------------cCCCCCCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccc-eeE
Q 012138 321 --------------GSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG-LFN 382 (470)
Q Consensus 321 --------------~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g-~~~ 382 (470)
....+.++.+++++.++++.+.+ +.+.++.+++.+++.+.|++++.. .+......+ .+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~---~~~~~~~~~~~~~ 294 (356)
T cd06451 218 FDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGLK---LLAKPELRSPTVT 294 (356)
T ss_pred ecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCe---eccCcccCCCceE
Confidence 11223556667777788877654 456777788888888888775322 111111122 233
Q ss_pred EEEeccCCCchhHHHHHHHHHHc-CceeccC----CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 383 AVEFDKTALPVSAYDICLKMKER-GILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~----~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
++.++.. .+..++++.|.++ ||.+.++ .++++|+++...+|+||+++++++|+++++
T Consensus 295 ~~~~~~~---~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 295 AVLVPEG---VDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred EEECCCC---CCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 3333322 3678899999999 9998764 256899999999999999999999998764
No 218
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.91 E-value=2.8e-22 Score=198.49 Aligned_cols=316 Identities=16% Similarity=0.138 Sum_probs=205.0
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCC----eEEecCChhHHHHHHHHHHHHhchhcccCCCCCc
Q 012138 92 CHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYD----MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEA 167 (470)
Q Consensus 92 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~----~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~ 167 (470)
.+|.+.+++.... .+....+ .+...++++.++++++.+ .+++++||+++++.++..+.. +++
T Consensus 10 ~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~---------~~~- 75 (355)
T TIGR03301 10 TSATVRDAMLVDW---CHWDSEF-NDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVP---------RDG- 75 (355)
T ss_pred CCHHHHHHhhhhc---cCCCHHH-HHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccC---------CCC-
Confidence 4567777766622 2211112 356778889999988753 577899999999999987653 345
Q ss_pred EEEEEccCcccccc-chhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhh
Q 012138 168 IIVSCCGCFHGRTL-AAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY 246 (470)
Q Consensus 168 ~ii~~~~~yhg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~ 246 (470)
.+++..+++++... ......+.+.... +... ... .|+++++++++++ .+++.+++...++++|.+.|
T Consensus 76 ~vi~~~~~~~~~~~~~~a~~~g~~~~~i---~~~~-~~~---~d~~~l~~~l~~~-~~~~~v~~~~~~~~~G~~~~---- 143 (355)
T TIGR03301 76 KLLVLINGAYGERLAKICEYLGIPHTDL---NFSE-YEP---PDLNRIEEALAAD-PDITHVATVHHETTTGILNP---- 143 (355)
T ss_pred eEEEECCCchhhHHHHHHHHcCCceEEE---ecCC-CCC---CCHHHHHHHHHhC-CCceEEEEEecCCcccchhH----
Confidence 44444444444322 1111111111100 0000 011 1799999999763 24556654445889999997
Q ss_pred HHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcCC-------
Q 012138 247 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE------- 319 (470)
Q Consensus 247 l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~------- 319 (470)
+++|.++|++||+++|+|++++ +|. ..+.+..++++.-+.+++|+++|+. ++|++++++++++.+....
T Consensus 144 ~~~i~~l~~~~~~~livD~~~s-~g~--~~~~~~~~~~d~~~~s~~K~l~~~~-G~g~~~~~~~~~~~~~~~~~~~~~~~ 219 (355)
T TIGR03301 144 LEAIAKVARSHGAVLIVDAMSS-FGA--IPIDIEELDVDALIASANKCLEGVP-GFGFVIARRDLLEASAGNARSLYLDL 219 (355)
T ss_pred HHHHHHHHHHcCCEEEEEeccc-cCC--cccchhhcCccEEEecCCcccccCC-ceeEEEECHHHHHHhhCCCCCceeeH
Confidence 9999999999999999999886 332 2233344444333458889988765 7899999999988765210
Q ss_pred ----------ccCCCCCCHHHHHHHHHHHHHHhh----hhHHHHHHHHHHHHHHHHHHHHhhCCCceEE-EeccceeEEE
Q 012138 320 ----------HGSTFGGNPLASAVAIASLDVIRD----EKLAERSAHLGEELRQHLFKIQQQFPNYVKE-VRGRGLFNAV 384 (470)
Q Consensus 320 ----------~~~t~~~~~~~~aaa~a~l~~~~~----~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~-~~~~g~~~~~ 384 (470)
....++.+...+.++.++++.+.+ ++..++.+++.+++.+.|++++.. .+.. ....+.++++
T Consensus 220 ~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~---~~~~~~~~~~~~~~~ 296 (355)
T TIGR03301 220 YDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGFQ---PLLPERWQSPIIVSF 296 (355)
T ss_pred HHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCe---eecCCCCCCCcEEEE
Confidence 112456777888888888887754 335566777888888888775321 1111 1123444555
Q ss_pred EeccCCCchhHHHHHHHHHHcCceeccCC---CCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 012138 385 EFDKTALPVSAYDICLKMKERGILAKPTH---DTIVRLTPPLSISSNELQEGSKALHDVL 441 (470)
Q Consensus 385 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~---~~~iR~~~~~~~t~e~i~~~~~~l~~~l 441 (470)
.++... ..+..++.++|.++||.+.++. .+++||++...+++++++++++.|++++
T Consensus 297 ~~~~~~-~~~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 297 LYPDDP-DFDFDDFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred ECCCCC-cchHHHHHHHHHHCCEEEECCccccccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 544311 1245789999999999998864 3789999888889999999999998764
No 219
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.91 E-value=1.4e-22 Score=204.74 Aligned_cols=302 Identities=16% Similarity=0.178 Sum_probs=189.2
Q ss_pred CCcHHHHHHHHhhhhC------CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCC
Q 012138 116 NDKFPVFAERLTSMFG------YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD 189 (470)
Q Consensus 116 ~~~~~~l~~~l~~~~~------~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~ 189 (470)
..++.++++++.+.++ .++|++|+|+++|++.++.++.. +|+ .|++..|.|.+.........+.
T Consensus 98 ~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~---------pGD-~Vlv~~P~Y~~f~~~~~~~~g~ 167 (447)
T PLN02607 98 KSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILAD---------PGD-ALLVPTPYYPGFDRDLRWRTGV 167 (447)
T ss_pred HHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCC---------CCC-EEEEcCCCCcchHHHHHhcCCc
Confidence 3456677777776543 35799999999999998876654 565 7888899987664432211111
Q ss_pred cccccCCCCCCCCeeeecCCCHHHHHHHHHhc---CCCeEEEE-EccccCCCccccCChhhHHHHHHHHHhcCcEEEEec
Q 012138 190 NEAIRGFGPLLPGHLKVDFGDITALEKIFKES---GDQIAGFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 265 (470)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~---~~~~~~vi-~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~De 265 (470)
......+.. .+...+ |++++++++++. +.++++++ ++| +||+|.++ +++.+++|.++|++||+.||+||
T Consensus 168 ~vv~v~~~~--~~~f~~---~~~~le~a~~~a~~~~~~vk~lll~nP-~NPtG~~~-s~e~l~~l~~~~~~~~i~lI~DE 240 (447)
T PLN02607 168 KIVPIHCDS--SNNFQV---TPQALEAAYQEAEAANIRVRGVLITNP-SNPLGATV-QRSVLEDILDFVVRKNIHLVSDE 240 (447)
T ss_pred EEEEEeCCC--CCCCcC---CHHHHHHHHHHHHHhCCCeeEEEEeCC-CCCcCccc-CHHHHHHHHHHHHHCCCEEEEec
Confidence 111100000 000111 789999988652 34678777 555 99999999 99999999999999999999999
Q ss_pred cccCCcccCCcc-cc-c---cCCC-C-cc----eeecccccc-CCCcceeEEEe-cHHHHhhcCcCCccCCC-CCCHHHH
Q 012138 266 IQSGLARSGRML-AS-D---WEEV-R-PD----MVILGKALG-GGVIPVSAVLA-DKEVMLCIQPGEHGSTF-GGNPLAS 331 (470)
Q Consensus 266 v~~g~g~~G~~~-~~-~---~~~~-~-pd----i~s~sK~l~-gG~~~ig~v~~-~~~~~~~~~~~~~~~t~-~~~~~~~ 331 (470)
+|.++.+.+..+ .. + ..+. . ++ +.+|||.++ +|+ |+|++++ ++++++.++.. ..| ..+.+++
T Consensus 241 iYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~Gl-RvG~ivs~n~~l~~~~~~~---~~~~~~s~~~q 316 (447)
T PLN02607 241 IYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGF-RVGTIYSYNDKVVTTARRM---SSFTLVSSQTQ 316 (447)
T ss_pred cccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcc-eEEEEEEcCHHHHHHHHHH---hhcCCCCHHHH
Confidence 999743333221 11 1 1110 1 22 348999998 898 9999997 67776665432 223 3455666
Q ss_pred HHHHHHHHH--Hhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecc-ceeEEEEeccC-C--CchhHHHHHHHH
Q 012138 332 AVAIASLDV--IRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGR-GLFNAVEFDKT-A--LPVSAYDICLKM 402 (470)
Q Consensus 332 aaa~a~l~~--~~~---~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~-g~~~~~~~~~~-~--~~~~~~~~~~~l 402 (470)
.++...|+. +.+ ...++++++..+.+.+.|++. .+...++. |.|+++.+... . ......++.++|
T Consensus 317 ~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~------gi~~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~l 390 (447)
T PLN02607 317 HLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA------GIECLKGNAGLFCWMNLSPLLETPTREGELALWDSI 390 (447)
T ss_pred HHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC------CCCcccCCeeEEEEEEchHhhcCCCchhHHHHHHHH
Confidence 665555432 001 112333333444444455442 23344555 55666655321 0 001235677777
Q ss_pred HH-cCceeccCC------CCEEEEecCCCCCHHHHHHHHHHHHHHHhcccC
Q 012138 403 KE-RGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 403 ~~-~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
.+ .||.+.|+. ++++|+++.. .+++.+++++++|.++++ +.+
T Consensus 391 l~~~gV~v~pG~~f~~~~~g~fRi~fa~-~~~~~l~~gl~Ri~~~l~-~~~ 439 (447)
T PLN02607 391 LREVKLNISPGSSCHCSEPGWFRVCFAN-MSEDTLEVALKRIHRFMD-RRK 439 (447)
T ss_pred HHhCCEEEcCccccCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHH-HHH
Confidence 76 599998873 6899999432 479999999999999998 543
No 220
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=3e-22 Score=198.42 Aligned_cols=288 Identities=14% Similarity=0.149 Sum_probs=190.0
Q ss_pred HHHHHHHHhhhhC--CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCC
Q 012138 119 FPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGF 196 (470)
Q Consensus 119 ~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 196 (470)
..++.+.++++++ .++|++++|+++++..+++++.. +|++.|++.+++|....... ...+.....
T Consensus 61 ~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~---------~g~~~vlv~~p~y~~~~~~~-~~~g~~~~~--- 127 (364)
T PRK04781 61 PPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCV---------PGRDAVLVTPPVFGMYAVCA-RLQNAPLVE--- 127 (364)
T ss_pred HHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcC---------CCCCeEEEcCCChHHHHHHH-HHcCCEEEE---
Confidence 5678888888775 45799999999999999987754 46457888888874322211 111111110
Q ss_pred CCCCC--CeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccC
Q 012138 197 GPLLP--GHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG 274 (470)
Q Consensus 197 ~~~~~--~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G 274 (470)
.+... +...+ |++++++.+.. .++++|++..++||||.++ +.+.++++.+.|+ +++++|+||+|..|....
T Consensus 128 v~~~~~~~~~~~---d~~~l~~~~~~--~~~~lv~l~~p~NPTG~~~-~~~~~~~l~~~~~-~~~~iI~Deay~~f~~~~ 200 (364)
T PRK04781 128 VPLVDGADGFHA---DVPAIVAAALA--SNAKLVFLCSPSNPAGSAI-ALDQIERALQALQ-GKALVVVDEAYGEFSDVP 200 (364)
T ss_pred EecCCCccCCCc---CHHHHHHHHhc--cCCeEEEEcCCCCCCCCCc-CHHHHHHHHHhCC-CCcEEEEeCcchhhcCCc
Confidence 01100 00111 67777555433 2677777555599999999 7888888888886 479999999999875322
Q ss_pred Cccc-cccCCCCcceeecccccc-CCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHh--h-hhHHHH
Q 012138 275 RMLA-SDWEEVRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR--D-EKLAER 349 (470)
Q Consensus 275 ~~~~-~~~~~~~pdi~s~sK~l~-gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~--~-~~~~~~ 349 (470)
.... .+..+-..-+.||||.++ +|+ |+||+++++++++.+.... ..++.+.+++.++.++|+.-. . .+..+.
T Consensus 201 ~~~~~~~~~~~vi~~~SfSK~~gl~Gl-RvGy~v~~~~l~~~l~~~~--~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~ 277 (364)
T PRK04781 201 SAVGLLARYDNLAVLRTLSKAHALAAA-RIGSLIANAELIAVLRRCQ--APYPVPTPCAALAEQALSAPALAVTARRVAE 277 (364)
T ss_pred chHHHHhhCCCEEEEecChhhcccccc-eeeeeeCCHHHHHHHHhcc--CCCCCCHHHHHHHHHHHhcccHHHHHHHHHH
Confidence 1111 111111122449999999 999 9999999999999887433 356777887777777665311 1 223334
Q ss_pred HHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCC-----CCEEEEecCCC
Q 012138 350 SAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-----DTIVRLTPPLS 424 (470)
Q Consensus 350 ~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-----~~~iR~~~~~~ 424 (470)
+++.++.+.+.|+++ |......++.|.|+++.+. +..++.+.|.++||.+.++. .+++||+ .
T Consensus 278 ~~~~r~~l~~~L~~~----~~~~~~~p~~g~f~~~~~~------~~~~~~~~l~~~gI~v~~~~~~~~~~~~~Ris---~ 344 (364)
T PRK04781 278 VRAERERLHAALAQL----PGVRRVYPSQGNFLLVRFD------DAEAAFQALLAAGVVVRDQRAAPRLSDALRIT---L 344 (364)
T ss_pred HHHHHHHHHHHHHhC----CCCCeECCCCCcEEEEEcC------CHHHHHHHHHHCCeEEeeCCCCCCCCCeEEEe---C
Confidence 555666666666553 2222234567877777653 35678899999999998763 5799999 3
Q ss_pred CCHHHHHHHHHHHHHHHh
Q 012138 425 ISSNELQEGSKALHDVLE 442 (470)
Q Consensus 425 ~t~e~i~~~~~~l~~~l~ 442 (470)
.+.++.++++++|+++..
T Consensus 345 ~~~~~~~~l~~al~~~~~ 362 (364)
T PRK04781 345 GTPEQNDRVLAALQRTQA 362 (364)
T ss_pred CCHHHHHHHHHHHHHHHh
Confidence 478999999999988654
No 221
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.91 E-value=8.1e-22 Score=199.62 Aligned_cols=334 Identities=14% Similarity=0.197 Sum_probs=215.3
Q ss_pred CeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCC-CC------CCcHHHHHHHHhhhhCC---CeEEecCChhHH
Q 012138 75 NKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRA-FY------NDKFPVFAERLTSMFGY---DMVLPMNTGAEG 144 (470)
Q Consensus 75 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~-~~------~~~~~~l~~~l~~~~~~---~~v~~~~sGteA 144 (470)
..|+|..+. |..++.+.+++.+.+......... .+ .+...++.+.++++++. ++|+|++|++++
T Consensus 33 ~iyLd~a~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a 106 (424)
T PLN02855 33 LVYLDNAAT------SQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATEA 106 (424)
T ss_pred eEEeeCccc------cCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHH
Confidence 467776333 335688999998887655322211 11 12245777788888864 479999999999
Q ss_pred HHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCC
Q 012138 145 VETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQ 224 (470)
Q Consensus 145 ~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~ 224 (470)
+..+++.... .. ..+|+ .|++..+.|++.......+.........+.+..++. .+ |++++++.+++ +
T Consensus 107 l~~i~~~~~~-~~----~~~gd-~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~-~~---~~~~l~~~i~~---~ 173 (424)
T PLN02855 107 INLVAYTWGL-AN----LKPGD-EVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDE-VL---DVEQLKELLSE---K 173 (424)
T ss_pred HHHHHHHhhh-hc----CCCcC-EEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCC-Cc---CHHHHHHHhcc---C
Confidence 9998875310 00 01455 677777665432211111100000110011111110 12 78999999875 7
Q ss_pred eEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCccee--eccccccCCCcce
Q 012138 225 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGGGVIPV 302 (470)
Q Consensus 225 ~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~--s~sK~l~gG~~~i 302 (470)
+++|++..++|++|.+.| +++|.++|++||+++|+|++|+ ++.. .+....+ .+|++ ++.|.+ |.. ++
T Consensus 174 t~lv~i~~~~n~tG~~~~----~~~I~~l~~~~g~~vivD~a~~-~g~~--~~~~~~~--~~d~~~~s~~K~~-gp~-G~ 242 (424)
T PLN02855 174 TKLVATHHVSNVLGSILP----VEDIVHWAHAVGAKVLVDACQS-VPHM--PVDVQTL--GADFLVASSHKMC-GPT-GI 242 (424)
T ss_pred ceEEEEeCccccccccCC----HHHHHHHHHHcCCEEEEEhhhh-cCCc--CCCchhc--CCCEEEeeccccc-CCC-cc
Confidence 889998888999999998 9999999999999999999996 2211 1122223 34665 667944 433 68
Q ss_pred eEEEecHHHHhhcCcCCccC---------------------CCCCCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHH
Q 012138 303 SAVLADKEVMLCIQPGEHGS---------------------TFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELR 358 (470)
Q Consensus 303 g~v~~~~~~~~~~~~~~~~~---------------------t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~ 358 (470)
|++++++++++.+.+...+. ..+.+..+.+++.++++.+.+ +.+.++.+++.++++
T Consensus 243 G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~ 322 (424)
T PLN02855 243 GFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLY 322 (424)
T ss_pred EEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 99999999887775431110 112556677777778887655 556677777888887
Q ss_pred HHHHHHHhhCCCceEEE-------eccceeEEEEeccCCCchhHHHHHHHHHHc-CceeccCC------------CCEEE
Q 012138 359 QHLFKIQQQFPNYVKEV-------RGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPTH------------DTIVR 418 (470)
Q Consensus 359 ~~L~~l~~~~p~~~~~~-------~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~------------~~~iR 418 (470)
+.|+++ | .+... ..++.++.+.++. .+..++.+.|.++ ||.+..+. .+++|
T Consensus 323 ~~L~~~----~-g~~i~~~~~~~~~~r~~~v~~~~~~----~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iR 393 (424)
T PLN02855 323 EKLSSV----P-GVRIYGPKPSEGVGRAALCAFNVEG----IHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASAR 393 (424)
T ss_pred HHHhcC----C-CEEEeCCCcccccCcccEEEEEECC----cCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEE
Confidence 777654 1 22222 1234566666543 2567899999888 99987542 46899
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHhcccCCC
Q 012138 419 LTPPLSISSNELQEGSKALHDVLELDLPKM 448 (470)
Q Consensus 419 ~~~~~~~t~e~i~~~~~~l~~~l~~~~~~~ 448 (470)
+++++.+|++|++++++.|+++++ .++..
T Consensus 394 iS~~~ynt~~di~~l~~~l~~~~~-~~~~~ 422 (424)
T PLN02855 394 ASLYFYNTKEEVDAFIHALKDTIA-FFSSF 422 (424)
T ss_pred EEeccCCCHHHHHHHHHHHHHHHH-HHHhh
Confidence 999999999999999999999998 65543
No 222
>PLN02397 aspartate transaminase
Probab=99.91 E-value=2.1e-22 Score=203.04 Aligned_cols=255 Identities=14% Similarity=0.033 Sum_probs=164.1
Q ss_pred CCCcEEEEEccCccccccchhcccCCcccccCCCCC-CCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccC
Q 012138 164 IDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPL-LPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIP 242 (470)
Q Consensus 164 ~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~ 242 (470)
+|+ .|++.+|+|.+........+..... .++ .++...+ |++.+++.+.++..+++++++..+|||||.++
T Consensus 141 pGd-~Vlv~~P~y~~y~~~~~~~g~~~~~----v~l~~~~~~~~---d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~- 211 (423)
T PLN02397 141 PGS-TIYIPNPTWGNHHNIFRDAGVPVRT----YRYYDPKTRGL---DFDGLLEDLKAAPDGSFVLLHACAHNPTGVDP- 211 (423)
T ss_pred CCC-EEEEeCCCchhHHHHHHHcCCeEEE----eecccCcCCcc---CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCC-
Confidence 466 7999999986665444333322111 011 0011122 78888888875434667777665699999999
Q ss_pred ChhhHHHHHHHHHhcCcEEEEeccccCCcccCC---ccc---cccCC-CCcceeecccccc-CCCcceeEEE--e-cHHH
Q 012138 243 PDGYLKAVRDLCSKYNILMIADEIQSGLARSGR---MLA---SDWEE-VRPDMVILGKALG-GGVIPVSAVL--A-DKEV 311 (470)
Q Consensus 243 ~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~---~~~---~~~~~-~~pdi~s~sK~l~-gG~~~ig~v~--~-~~~~ 311 (470)
+.+.+++|.++|++||++||+||+|.+|.+.+. ... +...+ ...-+-||||+++ +|+ |+||++ + ++++
T Consensus 212 s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~-RvG~~v~~~~~~~~ 290 (423)
T PLN02397 212 TPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGE-RVGALSVVCKSADV 290 (423)
T ss_pred CHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccc-cceEEEEEeCCHHH
Confidence 999999999999999999999999998865431 111 11111 1112339999999 899 999984 3 5555
Q ss_pred Hhh----cCcCCccCCCCCCHHHHHHHHHHHHHH--h------hhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccc
Q 012138 312 MLC----IQPGEHGSTFGGNPLASAVAIASLDVI--R------DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG 379 (470)
Q Consensus 312 ~~~----~~~~~~~~t~~~~~~~~aaa~a~l~~~--~------~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g 379 (470)
++. +........++.+.+.+.++.++|+.- . -+++++.++++++.+.+.|++++.. ..+..+.++|
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~--~~~~~~~p~g 368 (423)
T PLN02397 291 AVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSP--GDWSHITKQI 368 (423)
T ss_pred HHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--CCCCcccCCc
Confidence 443 222112223345666777666666421 0 1235556777777777777775311 1134456888
Q ss_pred eeEEEEeccCCCchhHHHHHHHHHHc-CceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 380 LFNAVEFDKTALPVSAYDICLKMKER-GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
.|+.| ++. + .+++++|+++ ||.+.+.+ |+++. ..+++.+++++++|+++++
T Consensus 369 g~fl~-~~l-----~-~~~~~~Ll~~~~V~v~~~~----Ri~~~-~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 369 GMFSF-TGL-----N-KEQVDRMTKEYHIYMTRDG----RISMA-GLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred eEEEe-cCC-----C-HHHHHHHHHhCCEEECCCC----eEEEe-eCCHHHHHHHHHHHHHHHh
Confidence 88888 432 2 3488888666 99987543 88842 3899999999999999986
No 223
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.91 E-value=8.7e-22 Score=197.95 Aligned_cols=320 Identities=11% Similarity=0.088 Sum_probs=203.7
Q ss_pred CeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCC-CC-----CCCcHHHHHHHHhhhhCC--CeEEecCChhHHHH
Q 012138 75 NKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSR-AF-----YNDKFPVFAERLTSMFGY--DMVLPMNTGAEGVE 146 (470)
Q Consensus 75 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~-----~~~~~~~l~~~l~~~~~~--~~v~~~~sGteA~~ 146 (470)
..|+|..+. +..++.+.+++.+.+......+. .+ ..+..+++++.++++++. +.+++++|+++++.
T Consensus 18 ~~yl~~~~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~ 91 (397)
T TIGR01976 18 RVFFDNPAG------TQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTF 91 (397)
T ss_pred eEEecCCcc------CCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHH
Confidence 467776433 23678999999998875432221 11 123457888889998874 36999999999988
Q ss_pred HHHHHHHHhchhcccCCCCCcEEEEEccCccccccch---hcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCC
Q 012138 147 TALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAA---ISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGD 223 (470)
Q Consensus 147 ~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~ 223 (470)
.++..+... ..+|+ .|++.++.|.+..... ....+.... +.+..++...+ |++++++.+++
T Consensus 92 ~~~~~~~~~------~~~gd-~vl~~~~~~~s~~~~~~~~~~~~g~~~~---~~~~~~~~~~~---~~~~l~~~i~~--- 155 (397)
T TIGR01976 92 LLSRAISRR------WGPGD-EVIVTRLDHEANISPWLQAAERAGAKVK---WARVDEATGEL---HPDDLASLLSP--- 155 (397)
T ss_pred HHHHHHHhc------CCCCC-EEEEcCCchHhHHHHHHHHHHhcCCEEE---EEeccccCCCc---CHHHHHHhcCC---
Confidence 777655320 01455 6777777654322111 111121111 11111101112 78999998865
Q ss_pred CeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCccee--eccccccCCCcc
Q 012138 224 QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGGGVIP 301 (470)
Q Consensus 224 ~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~--s~sK~l~gG~~~ 301 (470)
++++|+++.++|++|.+.| +++|.++|++||+++|+||+|. .+. . ......+ .+|++ +++|.+ |. +
T Consensus 156 ~~~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~~~-~-~~~~~~~--~~d~~~~s~~K~~--g~-~ 223 (397)
T TIGR01976 156 RTRLVAVTAASNTLGSIVD----LAAITELVHAAGALVVVDAVHY-APH-G-LIDVQAT--GADFLTCSAYKFF--GP-H 223 (397)
T ss_pred CceEEEEeCCCCCCCccCC----HHHHHHHHHHcCCEEEEehhhh-ccc-c-CCCHHHc--CCCEEEEechhhc--CC-c
Confidence 6888888777999999998 9999999999999999999996 211 1 1112223 34655 667877 44 7
Q ss_pred eeEEEecHHHHhhcCcCCccCC----------CCCCHHHHHHHHHHHHHHhhh-----------------hHHHHHHHHH
Q 012138 302 VSAVLADKEVMLCIQPGEHGST----------FGGNPLASAVAIASLDVIRDE-----------------KLAERSAHLG 354 (470)
Q Consensus 302 ig~v~~~~~~~~~~~~~~~~~t----------~~~~~~~~aaa~a~l~~~~~~-----------------~~~~~~~~~~ 354 (470)
+|++++++++++.+.+...... .+.+...+++..++++.+.+. ...++..++.
T Consensus 224 ~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~ 303 (397)
T TIGR01976 224 MGILWGRPELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLA 303 (397)
T ss_pred eEEEEEcHHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHH
Confidence 8999999998887765321111 124555666666777766432 2234445566
Q ss_pred HHHHHHHHHHHhhCCCceEEEe-----ccceeEEEEeccCCCchhHHHHHHHHHHcCceeccC---------------CC
Q 012138 355 EELRQHLFKIQQQFPNYVKEVR-----GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT---------------HD 414 (470)
Q Consensus 355 ~~l~~~L~~l~~~~p~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---------------~~ 414 (470)
+++++.|+++. .+.... ..+.++.+.+.. .+..++.++|.++||.+..+ ..
T Consensus 304 ~~l~~~L~~~~-----~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~ 374 (397)
T TIGR01976 304 EYLLVGLSDLP-----GVTLYGVARLAARVPTVSFTVHG----LPPQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEG 374 (397)
T ss_pred HHHHHHHhcCC-----CEEEeCCCCccCCCceEEEEeCC----cCHHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCC
Confidence 66666665532 232222 245566665532 25678999999999998754 24
Q ss_pred CEEEEecCCCCCHHHHHHHHHHH
Q 012138 415 TIVRLTPPLSISSNELQEGSKAL 437 (470)
Q Consensus 415 ~~iR~~~~~~~t~e~i~~~~~~l 437 (470)
+++|+++...+|++|++++++.|
T Consensus 375 ~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 375 GVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred CeEEEEeeccCCHHHHHHHHHhC
Confidence 68999999999999999999864
No 224
>PRK10534 L-threonine aldolase; Provisional
Probab=99.90 E-value=1.7e-22 Score=198.15 Aligned_cols=318 Identities=15% Similarity=0.155 Sum_probs=202.9
Q ss_pred EEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCC-CCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHh
Q 012138 77 YLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAF-YNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKW 155 (470)
Q Consensus 77 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~ 155 (470)
+|||.++.. -+ .+|.+.+++.+...... .| +.+...+|++.+++++|.+.+++++||++++..++.+...
T Consensus 1 ~~~~~~~~~---~~-p~~~~~~a~~~~~~~~~----~Y~~~~~~~~L~~~la~~~g~~~~~v~~~g~~a~~~~l~~~~~- 71 (333)
T PRK10534 1 MIDLRSDTV---TR-PSRAMLEAMMAAPVGDD----VYGDDPTVNALQDYAAELSGKEAALFLPTGTQANLVALLSHCE- 71 (333)
T ss_pred CcccccccC---CC-CCHHHHHHHHhccCCCc----ccCCCHHHHHHHHHHHHHhCCCeEEEeCchHHHHHHHHHHhcC-
Confidence 378888843 34 68999999876543322 23 4566789999999999999889999999999888876543
Q ss_pred chhcccCCCCCcEEEEEccCccc-cccc-hhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcC---CCeEEEEE
Q 012138 156 GYVKKKFSIDEAIIVSCCGCFHG-RTLA-AISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG---DQIAGFLF 230 (470)
Q Consensus 156 ~~~~~~~~~g~~~ii~~~~~yhg-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~---~~~~~vi~ 230 (470)
+|+ .|++..++|.. .... .....+.... ..+... ...+ |+++|+++++++. .++++|++
T Consensus 72 --------~gd-~vi~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~---d~~~l~~~i~~~~~~~~~~~lv~l 135 (333)
T PRK10534 72 --------RGE-EYIVGQAAHNYLYEAGGAAVLGSIQPQ---PIDAAA-DGTL---PLDKVAAKIKPDDIHFARTRLLSL 135 (333)
T ss_pred --------CCC-eeEEechhhhhHhcCCchHHhcCceEE---eecCCC-CCCC---CHHHHHHhhcccCcCcccceEEEE
Confidence 565 55555554321 1111 1111100000 001100 0111 7899998885410 14677775
Q ss_pred ccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCccc---CCccccccCCCCcc--eeeccccccCCCccee-E
Q 012138 231 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS---GRMLASDWEEVRPD--MVILGKALGGGVIPVS-A 304 (470)
Q Consensus 231 epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~---G~~~~~~~~~~~pd--i~s~sK~l~gG~~~ig-~ 304 (470)
+. +++|.+. +.+.+++|.++|++||++|++||+|. |+.. +... ..... .+| +++|||+++. ++| +
T Consensus 136 ~n--p~~G~v~-~~~~l~~i~~~~~~~~~~lvvDEA~~-~~~~~~~~~~~-~~~~~-~~~~~~~s~SK~~~~---~~G~~ 206 (333)
T PRK10534 136 EN--THNGKVL-PREYLKQAWEFTRERNLALHVDGARI-FNAVVAYGCEL-KEITQ-YCDSFTICLSKGLGT---PVGSL 206 (333)
T ss_pred ec--CCCCeec-CHHHHHHHHHHHHHcCCeEEeeHHHH-HHHHHHcCCCH-HHHHh-cCCEEEEEeEcCCCC---cccce
Confidence 53 3469999 88899999999999999999999987 3211 2111 00011 112 4589997763 567 5
Q ss_pred EEecHHHHhhcCcCCccC--CCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeE
Q 012138 305 VLADKEVMLCIQPGEHGS--TFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN 382 (470)
Q Consensus 305 v~~~~~~~~~~~~~~~~~--t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~ 382 (470)
+++++++++.++...... .+..+.++++++.++|+.. ....++..+.++++.+.|++++ +...++.+.|+
T Consensus 207 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~--~~~~~~~~~~r~~l~~~L~~~g------~~~~~~~~nfv 278 (333)
T PRK10534 207 LVGNRDYIKRARRWRKMTGGGMRQAGILAAAGLYALKHN--VARLQEDHDNAAWLAEQLREAG------ADVMRQDTNML 278 (333)
T ss_pred EEcCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHhCC------CccCCCCceEE
Confidence 888999988876433222 2223445566666666532 1233344445677778877752 23334567777
Q ss_pred EEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 383 AVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
++.++. . +..++.+.|+++||++.++. .+|++..+.+|+|++++++++|++++.
T Consensus 279 ~~~~~~-~---~~~~~~~~l~~~gi~v~~~~--~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 279 FVRVGE-E---QAAALGEYMRERNVLINASP--IVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred EEECCc-h---hHHHHHHHHHHcCeeecCCc--eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 776642 1 46788899999999998763 689986666899999999999998765
No 225
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=5.8e-22 Score=194.35 Aligned_cols=309 Identities=17% Similarity=0.163 Sum_probs=192.3
Q ss_pred CCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHH
Q 012138 73 EGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALK 150 (470)
Q Consensus 73 ~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~ 150 (470)
.+..++||..+... + ..+|.+.+++.+.+..... ..|...-..++.+.++++++ .++|++|+|+++++..+++
T Consensus 16 ~~~~~i~l~~~~~~--~-~~~~~~~~~~~~~~~~~~~--~~Y~~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~ 90 (337)
T PRK03967 16 EGNYRIWLDKNENP--F-DLPEELKEEIFEELKRVPF--NRYPHITSDPLREAIAEFYGLDAENIAVGNGSDELISYLVK 90 (337)
T ss_pred CCCceEEecCCCCC--C-CCCHHHHHHHHHHhhcCcc--ccCCCCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHH
Confidence 34567888877533 3 2678899999888754221 11222335677777777775 5689999999999987766
Q ss_pred HHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEE-
Q 012138 151 LARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFL- 229 (470)
Q Consensus 151 ~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi- 229 (470)
.+ +|+ .|++..|+|........ ..+..... .+...+ ..+ |++++++.+. ++++++
T Consensus 91 ~~-----------~gd-~V~v~~P~y~~~~~~~~-~~g~~~~~---v~~~~~-~~~---d~~~l~~~~~----~~~~v~~ 146 (337)
T PRK03967 91 LF-----------EGK-HIVITPPTFGMYSFYAK-LNGIPVID---VPLKED-FTI---DGERIAEKAK----NASAVFI 146 (337)
T ss_pred Hh-----------CCC-eEEEeCCChHHHHHHHH-HcCCeEEE---eecCCC-CCc---CHHHHHHhcc----CCCEEEE
Confidence 43 244 78889999864332221 11111110 011000 112 7788887643 455555
Q ss_pred EccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccc-cccCCCCcceeecccccc-CCCcceeEEEe
Q 012138 230 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEEVRPDMVILGKALG-GGVIPVSAVLA 307 (470)
Q Consensus 230 ~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~-~~~~~~~pdi~s~sK~l~-gG~~~ig~v~~ 307 (470)
++| +||||.+++ .++|.++++ +++++|+||+|.+|... .... .+...-..-+.||||.++ +|+ |+||+++
T Consensus 147 ~~P-~NPtG~~~~----~~~l~~i~~-~~~~ii~De~y~~~~~~-~~~~~~~~~~~vi~l~S~SK~~~l~Gl-RiG~iv~ 218 (337)
T PRK03967 147 CSP-NNPTGNLQP----EEEILKVLE-TGKPVVLDEAYAEFSGK-SLIGLIDEYPNLILLRTFSKAFGLAGI-RAGYAIA 218 (337)
T ss_pred eCC-CCCCCCCCC----HHHHHHHHh-cCCEEEEECchhhhccc-chHHHHhhCCCEEEEecchHhhcchhh-hheeeec
Confidence 555 999999995 566667774 79999999999987421 1111 111111112349999999 998 9999999
Q ss_pred cHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEe
Q 012138 308 DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 386 (470)
Q Consensus 308 ~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~ 386 (470)
++++++.+.... ..++.+.+++.++.++|+..+. .+..+...+.++.+.+.|.+. ..++.|.++++.+
T Consensus 219 ~~~~i~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~---------~~~~~~~~~~~~~ 287 (337)
T PRK03967 219 NEEIIDALYRIK--PPFSLNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEY---------AYPSDANFLLLKL 287 (337)
T ss_pred CHHHHHHHHhhc--CCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC---------cCCCCCcEEEEhH
Confidence 999988886433 3456788888888777753211 112223333334444444321 1234455544422
Q ss_pred ccCCCchhHHHHHHHHHHcCceeccC---CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 387 DKTALPVSAYDICLKMKERGILAKPT---HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 387 ~~~~~~~~~~~~~~~l~~~Gv~~~~~---~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
.+.+.|.++||.+.++ ..+++||++ .+.++.+++++.|+++.+
T Consensus 288 ----------~~~~~l~~~gi~v~~~~~~~~~~~Ri~~---~~~~~~~~l~~~l~~~~~ 333 (337)
T PRK03967 288 ----------DAYDYLLENGIVVRKLSGRLEGHIRVTV---GKREENDEFIKALKEIKE 333 (337)
T ss_pred ----------HHHHHHHHCCEEEEeCCCCCCCeEEEec---CCHHHHHHHHHHHHHHHH
Confidence 2678899999998654 257899993 467888999999988765
No 226
>PRK08637 hypothetical protein; Provisional
Probab=99.90 E-value=1.5e-21 Score=195.27 Aligned_cols=302 Identities=11% Similarity=0.106 Sum_probs=188.5
Q ss_pred CCcHHHHHHHHhhhh---C---CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCC
Q 012138 116 NDKFPVFAERLTSMF---G---YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD 189 (470)
Q Consensus 116 ~~~~~~l~~~l~~~~---~---~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~ 189 (470)
.+++..+++++.+.. . .++|++|+|+++++..+++++.. +|+ .|++.+|+|...........+.
T Consensus 47 ~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~---------~gd-~Vlv~~P~y~~~~~~~~~~~g~ 116 (388)
T PRK08637 47 PELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVD---------QGD-TVLLPDHNWGNYKLTFNTRRGA 116 (388)
T ss_pred HHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcC---------CCC-EEEEcCCCCccHHHHHHHhcCC
Confidence 345566666655432 1 24689999999999999887765 455 7888999986655432222221
Q ss_pred cccccCCCCCCCCeeeecCCCHHHHHHHHHhc-CCCeEEEEEccccCCCccccCChhhHHHHHHHHHh-----cCcEEEE
Q 012138 190 NEAIRGFGPLLPGHLKVDFGDITALEKIFKES-GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK-----YNILMIA 263 (470)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~-~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~-----~gillI~ 263 (470)
.... .+...+...+ |++++++.++.. ....+++++..++||||.++ +++.+++|+++|++ ||++||+
T Consensus 117 ~vv~---v~~~~~~~~~---d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~-s~~~~~~l~~~~~~~~~~~~~~~iI~ 189 (388)
T PRK08637 117 EIVT---YPIFDEDGGF---DTDALKEALQAAYNKGKVIVILNFPNNPTGYTP-TEKEATAIVEAIKELADAGTKVVAVV 189 (388)
T ss_pred EEEE---ecccCCCCcC---CHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHHHhcCCcEEEEe
Confidence 1111 1110011122 789999988721 12344455443499999999 99999999999885 9999999
Q ss_pred eccccCCcccCCcc-c-ccc-CCCCcce--e---ecccccc-CCCcceeEEEec------HHHHhhcCcC----CccCCC
Q 012138 264 DEIQSGLARSGRML-A-SDW-EEVRPDM--V---ILGKALG-GGVIPVSAVLAD------KEVMLCIQPG----EHGSTF 324 (470)
Q Consensus 264 Dev~~g~g~~G~~~-~-~~~-~~~~pdi--~---s~sK~l~-gG~~~ig~v~~~------~~~~~~~~~~----~~~~t~ 324 (470)
||+|.+|.+.+... . +.. .+....+ + ++||.++ +|+ |+||++.+ +++++.+... .....+
T Consensus 190 De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGl-RlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 268 (388)
T PRK08637 190 DDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGF-RVGFITFGTKAGSSQTVKEALEKKVKGLIRSNIS 268 (388)
T ss_pred cccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCccc-ceEEEEEccccCCcHHHHHHHHHHHHHHhhcccC
Confidence 99999886555321 1 111 1222232 2 7999865 898 99999853 6777666421 112234
Q ss_pred CCCHHHHHHHHHHHHHHhhhhHHHHHHHHH-------HHHHHHHHHHHhhCCCceEEEeccceeEEE-EeccCCCchhHH
Q 012138 325 GGNPLASAVAIASLDVIRDEKLAERSAHLG-------EELRQHLFKIQQQFPNYVKEVRGRGLFNAV-EFDKTALPVSAY 396 (470)
Q Consensus 325 ~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~-------~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~-~~~~~~~~~~~~ 396 (470)
+.+.++++++.++|+ +..+.++.+++. +.+.+.|++.. .+..+...++.|.++.| .++ . .+..
T Consensus 269 ~~s~~~q~a~~~~l~---~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~--~~~~~~~~~~~~g~~~~~~l~--~--~~~~ 339 (388)
T PRK08637 269 NGPHPSQSAVLRALN---SPEFDKEKQEKFQILKERYEKTKEVLYDGK--YDDAWQAYPFNSGYFMCLKLK--G--VDAE 339 (388)
T ss_pred CCCcHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCCCcccccccceEEEEecCC--h--HHHH
Confidence 577888888877764 223333333333 33333333221 11123344555555555 443 1 3577
Q ss_pred HHHHHHH-HcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccC
Q 012138 397 DICLKMK-ERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 397 ~~~~~l~-~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
++++.|. ++||.+.+.+.+++||+... .+++++++++++|.++++ .++
T Consensus 340 ~l~~~l~~~~gv~~~~~~~~~iRi~~~~-~~~~~i~~~~~~l~~~~~-~~~ 388 (388)
T PRK08637 340 ELRVHLLEKYGIGTIALNETDLRIAFSC-VEEEDIPELFDSIYKAIK-DLR 388 (388)
T ss_pred HHHHHHhhhcceEEEeccCCceEEEeec-CCHHHHHHHHHHHHHHHH-hcC
Confidence 8999986 56998876667899999654 689999999999999998 653
No 227
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.90 E-value=1.4e-21 Score=194.05 Aligned_cols=294 Identities=13% Similarity=0.097 Sum_probs=194.9
Q ss_pred CcHHHHHHHHhhhhCCC----eEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCcccccc-chhcccCCcc
Q 012138 117 DKFPVFAERLTSMFGYD----MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTL-AAISMSCDNE 191 (470)
Q Consensus 117 ~~~~~l~~~l~~~~~~~----~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~-~~~~~~~~~~ 191 (470)
+..+++.+.++++++.+ .+++|+||+++++.++..+.. +++++|+... ++++... ......+...
T Consensus 35 ~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~---------~~~~vlv~~~-~~~~~~~~~~a~~~g~~~ 104 (363)
T TIGR02326 35 IVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVP---------KDGKLLVVIN-GAYGARIVQIAEYLGIPH 104 (363)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCC---------CCCeEEEEeC-ChhhHHHHHHHHHcCCce
Confidence 34567788888888753 589999999999999987643 4554455444 4455431 1111111111
Q ss_pred cccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCc
Q 012138 192 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 271 (470)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g 271 (470)
.. .+... ...+ |+++++++++++ .+++++.+..+.|++|.+.| +++|.++|++||+++|+|++|+ +|
T Consensus 105 ~~---v~~~~-~~~~---d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~~----i~~I~~l~~~~g~~livD~~~~-~g 171 (363)
T TIGR02326 105 HV---VDTGE-VEPP---DVVEVEAILAAD-PAITHIALVHCETTTGILNP----IEAVAKLAHRHGKVTIVDAMSS-FG 171 (363)
T ss_pred EE---EeCCC-CCCC---CHHHHHHHHhhC-CCccEEEEEeecCCccccCc----HHHHHHHHHHcCCEEEEEcccc-cc
Confidence 00 01100 0111 789999998763 24566666666999999998 9999999999999999999987 43
Q ss_pred ccCCccccccCCCCccee--eccccccCCCcceeEEEecHHHHhhcCcCC------------------ccCCCCCCHHHH
Q 012138 272 RSGRMLASDWEEVRPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGE------------------HGSTFGGNPLAS 331 (470)
Q Consensus 272 ~~G~~~~~~~~~~~pdi~--s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~------------------~~~t~~~~~~~~ 331 (470)
.. .+....++ +|++ +++|+++|+. ++|+++++++.++.+.+.. ....|+.+....
T Consensus 172 ~~--~~~~~~~~--~D~~~~s~~K~l~~p~-G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~ 246 (363)
T TIGR02326 172 GI--PIDIAELH--IDYLISSANKCIQGVP-GFGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVV 246 (363)
T ss_pred Cc--ccchhhcC--ccEEEecCccccccCC-cceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHH
Confidence 22 22333344 4654 6779998776 7899999998877653210 113456777788
Q ss_pred HHHHHHHHHHhh----hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEE-eccceeEEEEeccCCCchhHHHHHHHHHHcC
Q 012138 332 AVAIASLDVIRD----EKLAERSAHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDICLKMKERG 406 (470)
Q Consensus 332 aaa~a~l~~~~~----~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~G 406 (470)
.+..++++.+.+ ++..++.+++.+++++.|++++.. .+... ...+.+..+.++... ..+..++.+.|.++|
T Consensus 247 ~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~L~~~g 322 (363)
T TIGR02326 247 HAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALGFE---PLLDDEIQSPIITSFYSPEDP-DYRFADFYQRLKEQG 322 (363)
T ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCe---eccCcccCCceEEEEECCCCC-CCCHHHHHHHHHHCC
Confidence 888888877644 346677888888888888776322 11111 112333445443320 125678999999999
Q ss_pred ceeccCC---CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 407 ILAKPTH---DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 407 v~~~~~~---~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
|.+.++. .+.+|+++...++.+++++++++|++++.
T Consensus 323 i~v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 323 FVIYPGKVSQVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred EEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 9998773 57899997667899999999999999875
No 228
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=3.2e-22 Score=197.66 Aligned_cols=278 Identities=14% Similarity=0.169 Sum_probs=183.4
Q ss_pred cHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccC
Q 012138 118 KFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRG 195 (470)
Q Consensus 118 ~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~ 195 (470)
...+|.+.++++++ .++|++|+|+++++..+++++.. +|++.|++..|+|......+...+.. ...
T Consensus 61 ~~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~~---------~g~d~vlv~~P~y~~y~~~~~~~g~~-v~~-- 128 (354)
T PRK04635 61 QPPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCE---------PGQDSIACFGPTYGMYAISAETFNVG-VKA-- 128 (354)
T ss_pred CHHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhcC---------CCCCeEEEcCCChHHHHHHHHHcCCE-EEE--
Confidence 35778888888876 45799999999999999987754 56457888999986544332222111 100
Q ss_pred CCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCC
Q 012138 196 FGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR 275 (470)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~ 275 (470)
.+...+ ..+ |++.+++ + . ++++|++..++||||.++ +.+.+++|.+.|+ +++||+||+|..|.....
T Consensus 129 -v~~~~~-~~~---~~~~l~~-~-~---~~~li~i~nP~NPTG~~~-~~~~l~~l~~~~~--~~~vivDeay~~~~~~~s 195 (354)
T PRK04635 129 -LPLTAD-YQL---PLDYIEQ-L-D---GAKLVFICNPNNPTGTVI-DRADIEQLIEMTP--DAIVVVDEAYIEFCPEYS 195 (354)
T ss_pred -EecCCC-CCC---CHHHHHh-c-c---CCCEEEEeCCCCCCCccC-CHHHHHHHHHhCC--CcEEEEeCchHhhccCcc
Confidence 011000 111 6777763 3 2 677777555599999999 7777777777765 499999999987743211
Q ss_pred ccccccCCCCcc---eeecccccc-CCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh---hhHHH
Q 012138 276 MLASDWEEVRPD---MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAE 348 (470)
Q Consensus 276 ~~~~~~~~~~pd---i~s~sK~l~-gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~---~~~~~ 348 (470)
.... ....+. +.||||.++ +|+ |+||+++++++++.+... ...++.+.+.+.++.++|+.... ....+
T Consensus 196 ~~~~--~~~~~~~iv~~S~SK~~~l~Gl-RlG~~i~~~~~~~~l~~~--~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~ 270 (354)
T PRK04635 196 VADL--LASYPNLVVLRTLSKAFALAGA-RCGFTLANEELIEILMRV--IAPYPVPLPVSEIATQALSEAGLARMKFQVL 270 (354)
T ss_pred hHHH--HhhCCCEEEEechHHHhhhhHH-HHhhhhCCHHHHHHHHhh--cCCCCCCHHHHHHHHHHHhcccHHHHHHHHH
Confidence 1111 111122 349999998 898 999999999999887642 23456666777777666643111 22334
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCC----CCEEEEecCCC
Q 012138 349 RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----DTIVRLTPPLS 424 (470)
Q Consensus 349 ~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~----~~~iR~~~~~~ 424 (470)
.+++.++++.+.|+++ + .+...++.|.|+++.+. +..++.+.|.++||.+..+. ++++|++ .
T Consensus 271 ~~~~~r~~l~~~L~~~----~-~~~~~~~~g~f~~~~~~------~~~~~~~~l~~~gv~v~~~~~~~~~~~lRis---~ 336 (354)
T PRK04635 271 DLNAQGARLQAALSMY----G-GAKVLEGNGNYVLAKFD------DVDAVFKALWDAGIVARAYKDPRLANCIRFS---F 336 (354)
T ss_pred HHHHHHHHHHHHHHhC----C-CceECCCCCcEEEEECC------CHHHHHHHHHHCCEEEEECCCCCCCCeEEEE---e
Confidence 4555556666666653 1 23444567777777553 35678889999999986542 5789999 3
Q ss_pred CCHHHHHHHHHHHHH
Q 012138 425 ISSNELQEGSKALHD 439 (470)
Q Consensus 425 ~t~e~i~~~~~~l~~ 439 (470)
.+++++++++++|++
T Consensus 337 ~~~e~~~~l~~al~~ 351 (354)
T PRK04635 337 SNRAETDKLIGLIRN 351 (354)
T ss_pred CCHHHHHHHHHHHHH
Confidence 578999999999975
No 229
>PRK07908 hypothetical protein; Provisional
Probab=99.90 E-value=2.3e-21 Score=191.28 Aligned_cols=310 Identities=17% Similarity=0.163 Sum_probs=195.8
Q ss_pred CCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHHH
Q 012138 74 GNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKL 151 (470)
Q Consensus 74 G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~~ 151 (470)
+..++||..+... ...++.+.+++.+.+.....++. ..-..++.+.++++++ .++|++|+|+++++..+++
T Consensus 21 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~Y~~---~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~- 93 (349)
T PRK07908 21 GPGLLDFAVNVRH---DTPPEWLRERLAARLGDLAAYPS---TEDERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR- 93 (349)
T ss_pred CCCeEEecCCCCC---CCCCHHHHHHHHHHhhHhhcCCC---ccchHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh-
Confidence 5678999887533 22678899999988765432211 1234567777777664 5689999999999988877
Q ss_pred HHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEc
Q 012138 152 ARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFE 231 (470)
Q Consensus 152 ~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~e 231 (470)
+ . + + .+++..|+|......... .+..... .+...+ ..+ |++++ ++ +++++++.
T Consensus 94 l-~---------~-~-~viv~~P~y~~~~~~~~~-~G~~i~~---v~~~~~-~~~---d~~~l----~~---~~~~i~l~ 146 (349)
T PRK07908 94 L-R---------P-R-RAAVVHPSFTEPEAALRA-AGIPVHR---VVLDPP-FRL---DPAAV----PD---DADLVVIG 146 (349)
T ss_pred c-C---------C-C-eEEEeCCCChHHHHHHHH-cCCEEEe---eccCcc-cCc---ChhHh----cc---CCCEEEEc
Confidence 2 2 3 3 455678888554332222 2211110 011111 111 45533 32 56676653
Q ss_pred cccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcce---eecccccc-CCCcceeEEEe
Q 012138 232 PIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM---VILGKALG-GGVIPVSAVLA 307 (470)
Q Consensus 232 pi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi---~s~sK~l~-gG~~~ig~v~~ 307 (470)
.++||||.+++ .++|.++|++ +.++|+||+|..|. .+........+. +++ .||||.++ +|+ |+||+++
T Consensus 147 np~NPTG~~~~----~~~l~~l~~~-~~~iIvDe~y~~~~-~~~~~~l~~~~~-~~~i~i~S~SK~~~l~Gl-RiG~~~~ 218 (349)
T PRK07908 147 NPTNPTSVLHP----AEQLLALRRP-GRILVVDEAFADAV-PGEPESLAGDDL-PGVLVLRSLTKTWSLAGL-RVGYALG 218 (349)
T ss_pred CCCCCCCCCcC----HHHHHHHHhc-CCEEEEECcchhhc-cCCccccccccC-CCEEEEeecccccCCccc-eeeeeec
Confidence 34999999995 5567778864 77888899998763 233222211111 232 38899998 998 9999999
Q ss_pred cHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHH--Hh-hhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEe-ccceeEE
Q 012138 308 DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDV--IR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR-GRGLFNA 383 (470)
Q Consensus 308 ~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~--~~-~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~-~~g~~~~ 383 (470)
++++++.+..... .+..+++.++++.+.++. .+ -++++++++++++++.+.|+++ .+.... ..|.+++
T Consensus 219 ~~~~~~~~~~~~~--~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~------~~~~~~p~~g~~~~ 290 (349)
T PRK07908 219 APDVLARLTRGRA--HWPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV------GARVVDPAAAPFVL 290 (349)
T ss_pred CHHHHHHHHhcCC--CCCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC------CcEeccCCCceEEE
Confidence 9999988764332 345566666655544431 11 1335556666666676666653 133333 4566666
Q ss_pred EEeccCCCchhHHHHHHHHHHcCceeccCC------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 384 VEFDKTALPVSAYDICLKMKERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
+.++ +...+.+.|+++||.+.++. .+++|+++ .+++++++++++|++++.
T Consensus 291 ~~~~------~~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~---~~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 291 VRVP------DAELLRKRLRERGIAVRRGDTFPGLDPDYLRLAV---RPRAEVPVLVQALAEILK 346 (349)
T ss_pred EECC------cHHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEe---CCCccHHHHHHHHHHHHh
Confidence 6543 24678889999999998752 57999994 578899999999998876
No 230
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.90 E-value=9.1e-23 Score=206.61 Aligned_cols=336 Identities=12% Similarity=0.124 Sum_probs=190.2
Q ss_pred EEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHH-HHHhhhh-----CCC--eEEecCChhHHHHHH
Q 012138 77 YLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFA-ERLTSMF-----GYD--MVLPMNTGAEGVETA 148 (470)
Q Consensus 77 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~-~~l~~~~-----~~~--~v~~~~sGteA~~~a 148 (470)
++++..+.. +..+|++++++.+.+....+.......+.++++. +++.+.+ ..+ +|++|+|+++|+..+
T Consensus 96 ~i~l~~g~p----~~~~~~~~~~~~~~~~~~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~ 171 (521)
T TIGR03801 96 IISYVIDQL----GFDPDAFLYEMCDGIIGDNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYI 171 (521)
T ss_pred HHhhcCCCC----CCCCCHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHH
Confidence 445555532 2235666677777653222211112223344444 3444432 123 799999999999998
Q ss_pred HHHHHHhchhcccCCCCCcEEEEEccCccccccchhccc-CCcccccCCCCCCCC---eeeecCCCHHHHHHHHHhcCCC
Q 012138 149 LKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMS-CDNEAIRGFGPLLPG---HLKVDFGDITALEKIFKESGDQ 224 (470)
Q Consensus 149 l~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~d~~~Le~~l~~~~~~ 224 (470)
+..+...... .+|+ .|++..|+|........... +.........+...+ .+.+ |+++|+++++. +
T Consensus 172 ~~~l~~~~ll----~pGD-~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~---d~~~l~~~~~~---~ 240 (521)
T TIGR03801 172 FDSLKANELL----KKGD-KIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQY---PDKELEKLRDP---S 240 (521)
T ss_pred HHHHhHhhcC----CCCC-EEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCC---CHHHHHHhcCC---C
Confidence 8763211111 1565 88889999865443321111 100000000000000 0222 78889887654 7
Q ss_pred eEEEE-EccccCCCccccCChhhHHHHHHHHHhc--CcEEEEeccccCCcccCCccccccCCCCcc----eeecccccc-
Q 012138 225 IAGFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKY--NILMIADEIQSGLARSGRMLASDWEEVRPD----MVILGKALG- 296 (470)
Q Consensus 225 ~~~vi-~epi~n~~G~~~~~~~~l~~l~~l~~~~--gillI~Dev~~g~g~~G~~~~~~~~~~~pd----i~s~sK~l~- 296 (470)
+++|+ ++| +||||.++ +++.+++|.++|++| |++||+||+|..|.. ..... ....|+ +.||||.++
T Consensus 241 ~kai~l~nP-~NPTG~vl-s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~--~~~sl--~~~~~~~vI~v~SfSK~fg~ 314 (521)
T TIGR03801 241 IKALFVVNP-SNPPSVAM-SDESIEKIVDIVANDRPDLMILTDDVYGTFVD--DFRSL--FAELPYNTIGVYSFSKYFGA 314 (521)
T ss_pred CcEEEEeCC-CCCCCCCC-CHHHHHHHHHHHHhcCCCeEEEECCCchhhcc--cccch--hhhCCCCEEEEEcchhhccC
Confidence 88877 555 99999999 999999999999987 999999999997743 11111 111222 348999997
Q ss_pred CCCcceeEEEecHH-----HHhh--------c------------------------CcCCccCCCCCCHHHHH-----HH
Q 012138 297 GGVIPVSAVLADKE-----VMLC--------I------------------------QPGEHGSTFGGNPLASA-----VA 334 (470)
Q Consensus 297 gG~~~ig~v~~~~~-----~~~~--------~------------------------~~~~~~~t~~~~~~~~a-----aa 334 (470)
+|+ |+||++++++ ++.. + +......+.+.+.+.+. ++
T Consensus 315 ~G~-RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~ 393 (521)
T TIGR03801 315 TGW-RLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSL 393 (521)
T ss_pred chh-hhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHH
Confidence 899 9999998754 2211 1 11112233444444433 22
Q ss_pred HHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCc---------------hhHHH
Q 012138 335 IASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP---------------VSAYD 397 (470)
Q Consensus 335 ~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~---------------~~~~~ 397 (470)
.+.++.-.. +..++.++++.+.+.+.| +. .+....+.|.|+.| ++..... .+..+
T Consensus 394 ~all~~~~~y~~~~~~~~~~R~~~l~~~L---g~----~~~~~~~~g~~Y~~-~di~~~~~~~~~~~f~~~l~~~~~~~~ 465 (521)
T TIGR03801 394 FALMDKENAYKAETKDICRRREKLLFRGL---GL----PLQEDPNDVAYYTL-IDLEEWAEKNYGEEFSSYLKKNYSPVD 465 (521)
T ss_pred HHHhccchhHHHHHHHHHHHHHHHHHHhc---CC----CCcCCCCCeEEEEE-eehHHHHHHhcchHHHHHHhccCCHHH
Confidence 233321111 223333444444443333 11 12123456655555 3322100 13567
Q ss_pred HHHHHHHc-CceeccCC-----CCEEEEecCCC-CCHHHHHHHHHHHHHHHhccc
Q 012138 398 ICLKMKER-GILAKPTH-----DTIVRLTPPLS-ISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 398 ~~~~l~~~-Gv~~~~~~-----~~~iR~~~~~~-~t~e~i~~~~~~l~~~l~~~~ 445 (470)
++.+|.++ ||.+.|+. .+++|++ +. .+++++.++.++|.++++ +.
T Consensus 466 ~~~~L~~e~gV~v~PG~~Fg~~~~~vRis--la~l~~~~~~~~~~rl~~~~~-~~ 517 (521)
T TIGR03801 466 VLFRLAEETGIVLLPGGGFGGPEWSVRVS--LANLNEYDYAEIGRAIRKILD-EY 517 (521)
T ss_pred HHHHHHHhCCEEEeCchhcCCCCCeEEEE--ecCCCHHHHHHHHHHHHHHHH-HH
Confidence 88888766 99998873 4689999 54 689999999999999987 64
No 231
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.90 E-value=1.4e-20 Score=190.35 Aligned_cols=329 Identities=14% Similarity=0.126 Sum_probs=203.2
Q ss_pred HHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEcc
Q 012138 95 KIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCG 174 (470)
Q Consensus 95 ~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~ 174 (470)
.+.+++.+++......+ .......+|++.++++++.+.+++|+||++|+..++.++.+ +|| |+...+
T Consensus 58 a~~~a~~~a~~~g~~~Y--~~~~g~~~Lreaia~~~~~~~vv~t~ggt~A~~~~~~all~---------pGD--Vii~~p 124 (460)
T PRK13238 58 AMSDRQWAAMMRGDEAY--AGSRSYYRLEDAVKDIFGYPYTIPTHQGRAAEQILFPVLIK---------KGD--VVPSNY 124 (460)
T ss_pred hhhHHHHHHHHhCCccc--CCCCCHHHHHHHHHHHhCCCcEEECCCHHHHHHHHHHHhCC---------CCC--EEccCC
Confidence 46777777775432211 12445688999999999999999999999999999887754 577 666666
Q ss_pred CccccccchhcccCCcccccCCCCCCC----C-eeeecC-CCHHHHHHHHHhcC-CCeEEEEEccccCCCc-cccCChhh
Q 012138 175 CFHGRTLAAISMSCDNEAIRGFGPLLP----G-HLKVDF-GDITALEKIFKESG-DQIAGFLFEPIQGEAG-VIIPPDGY 246 (470)
Q Consensus 175 ~yhg~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~-~d~~~Le~~l~~~~-~~~~~vi~epi~n~~G-~~~~~~~~ 246 (470)
.|..........++.+.. .+..+ . ...+.. -|+++|++++++++ +++++|+++..+||+| .++ +.+.
T Consensus 125 ~~~~~~~~i~~~G~~~v~----v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~-s~~~ 199 (460)
T PRK13238 125 HFDTTRAHIELNGATAVD----LVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPV-SMAN 199 (460)
T ss_pred cccchHHHHHHcCCEEEE----EeccccccccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCC-CHHH
Confidence 664332222222222111 11100 0 000110 18999999998654 4799999888899986 888 8999
Q ss_pred HHHHHHHHHhcCcEEEEeccccC----Cccc---CC-ccccccC----CCCcceeeccccccCCCcceeE-EEec-HHHH
Q 012138 247 LKAVRDLCSKYNILMIADEIQSG----LARS---GR-MLASDWE----EVRPDMVILGKALGGGVIPVSA-VLAD-KEVM 312 (470)
Q Consensus 247 l~~l~~l~~~~gillI~Dev~~g----~g~~---G~-~~~~~~~----~~~pdi~s~sK~l~gG~~~ig~-v~~~-~~~~ 312 (470)
+++|.++|++||++||+|++|.. |... |. ....... +--.|..++|-.- .|+.+.|+ ++.+ ++++
T Consensus 200 l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K-~g~~~~GG~i~~~d~~l~ 278 (460)
T PRK13238 200 LRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKK-DAMVNIGGLLCFRDEDLF 278 (460)
T ss_pred HHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEeccc-CCCCcceeEEEcChHHHH
Confidence 99999999999999999998852 2110 10 0000000 0113555555111 11124344 4555 5788
Q ss_pred hhcCcCC---c-cCCCCCCHHH-HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEec
Q 012138 313 LCIQPGE---H-GSTFGGNPLA-SAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 387 (470)
Q Consensus 313 ~~~~~~~---~-~~t~~~~~~~-~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~ 387 (470)
+.++... + ..++++.+.. ++|+..+|+...+++..+...+..++|.+.|++. .+..+.+.|.++.+ ++
T Consensus 279 ~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~~~~~~~l~~~L~~~------G~~~~~p~Gg~~v~-~d 351 (460)
T PRK13238 279 TECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYRIGQVEYLGEGLEEA------GVPIQTPAGGHAVF-VD 351 (460)
T ss_pred HHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHHHHHHHHHHHHHHHC------CCCeEccCCceEEE-EE
Confidence 7776542 2 3377775555 4444445654434444455555668888888774 23444556555544 33
Q ss_pred cCCC-------chhHHHHHHHHHHc-CceeccCC-----------------CCEEEEecCC-CCCHHHHHHHHHHHHHHH
Q 012138 388 KTAL-------PVSAYDICLKMKER-GILAKPTH-----------------DTIVRLTPPL-SISSNELQEGSKALHDVL 441 (470)
Q Consensus 388 ~~~~-------~~~~~~~~~~l~~~-Gv~~~~~~-----------------~~~iR~~~~~-~~t~e~i~~~~~~l~~~l 441 (470)
.... +..+.+++.+|.++ ||.+.|++ .+.+||++|- ..|.++++.++++|.++.
T Consensus 352 ~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~ 431 (460)
T PRK13238 352 AGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVK 431 (460)
T ss_pred chhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHH
Confidence 3211 12357788888766 99987642 4789999774 459999999999999988
Q ss_pred hcccCCCCC
Q 012138 442 ELDLPKMRK 450 (470)
Q Consensus 442 ~~~~~~~~~ 450 (470)
+ +...+.-
T Consensus 432 ~-~~~~~~~ 439 (460)
T PRK13238 432 E-NRESIKG 439 (460)
T ss_pred H-hHhhcCC
Confidence 7 6555443
No 232
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.89 E-value=1e-20 Score=187.62 Aligned_cols=323 Identities=14% Similarity=0.117 Sum_probs=200.3
Q ss_pred cCCCCCHHHHHHHHHHHHHccccCC------CCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhccc
Q 012138 88 NQGHCHPKIMKALQEQAEKLTLSSR------AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKK 161 (470)
Q Consensus 88 ~lG~~~p~v~~a~~~~~~~~~~~~~------~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~ 161 (470)
.-|+..|++.+++.+.......++. ....+...++++.+++++|.+++++++|+++++..++..+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~i~~~~g~t~al~~~l~~~~~------- 81 (361)
T cd06452 9 RGGRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGMDEARVTPGAREGKFAVMHSLCE------- 81 (361)
T ss_pred cCCCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCCceEEEeCCHHHHHHHHHHHhcC-------
Confidence 4566788888888887743322211 112456789999999999999999999999999999987654
Q ss_pred CCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCC-eeeecCCCHHHHHHHHHhcC----CCeEEEEEccccCC
Q 012138 162 FSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-HLKVDFGDITALEKIFKESG----DQIAGFLFEPIQGE 236 (470)
Q Consensus 162 ~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~Le~~l~~~~----~~~~~vi~epi~n~ 236 (470)
+|+ .|++..++|.+. .......+..... .+..++ ...+ |+++|++++++.. .++++|++..++||
T Consensus 82 --~gd-~Vl~~~~~~~~~-~~~~~~~g~~~~~---v~~~~~~~~~~---d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~ 151 (361)
T cd06452 82 --KGD-WVVVDGLAHYTS-YVAAERAGLNVRE---VPNTGHPEYHI---TPEGYAEVIEEVKDEFGKPPALALLTHVDGN 151 (361)
T ss_pred --CCC-EEEEcCCcchHH-HHHHHhcCCEEEE---EecCCCCCccc---CHHHHHHHHHHHhhccCCCceEEEEECCCCC
Confidence 455 566666664332 2222222211111 111111 0122 7899999887421 26788887666999
Q ss_pred CccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcC
Q 012138 237 AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQ 316 (470)
Q Consensus 237 ~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~ 316 (470)
+|.+.+ +++|.++|++||+++|+||+|+ +|.. .+....++.+..+.+++|+++++. ++|++++++++++.+.
T Consensus 152 tG~~~~----~~~i~~~~~~~~~~vivD~a~~-~g~~--~~~~~~~~~d~~~~s~~K~l~~~~-~~G~l~~~~~~~~~l~ 223 (361)
T cd06452 152 YGNLHD----AKKIAKVCHEYGVPLLLNGAYT-VGRM--PVSGKELGADFIVGSGHKSMAASA-PIGVLATTEEWADIVF 223 (361)
T ss_pred Ceeecc----HHHHHHHHHHcCCeEEEECCcc-cCCc--CCCHHHcCCCEEEecCCccccCCC-CeEEEEECHHHHHHHh
Confidence 999987 9999999999999999999997 2211 122223344334558889998776 9999999999988875
Q ss_pred cCCcc------CCC--CCCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEE---eccceeEEE
Q 012138 317 PGEHG------STF--GGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEV---RGRGLFNAV 384 (470)
Q Consensus 317 ~~~~~------~t~--~~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~---~~~g~~~~~ 384 (470)
..... ..+ +.....++++.++++.+.+ -....+..++.+++.+.|.++ | .+... .+...++.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~l----~-g~~v~~~~~~~~n~~~~ 298 (361)
T cd06452 224 RTSQMFKIKEVELLGCTLRGAPLVTLMASFPHVKERVKRWDEEVEKARWFVAELEKI----E-GIKQLGEKPKNHDLMFF 298 (361)
T ss_pred ccccccccceeeeeccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----C-CeEEECCCCCCCceEEE
Confidence 42211 001 1112234444455554322 111222223346666766654 1 22222 234445555
Q ss_pred EeccCC-----CchhHHHHHHHHHHcCceec-cCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 012138 385 EFDKTA-----LPVSAYDICLKMKERGILAK-PTHDTIVRLTPPLSISSNELQEGSKALHDVL 441 (470)
Q Consensus 385 ~~~~~~-----~~~~~~~~~~~l~~~Gv~~~-~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l 441 (470)
....-. ......++.+.|+++||.+. ++..+++|++.. .+++|+++.++++|++++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~~~ri~~~-g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 299 ETPSFDEIAKKHKRRGYFLYSELKKRGIHGIKPGLTRYFKLSTY-GLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred EcCCcchhhhhccccchhHHHHHHHcCceEEcCCCceEEEEEec-CCCHHHHHHHHHHHHHHh
Confidence 443100 01134479999999999964 344568899863 379999999999998765
No 233
>PRK02948 cysteine desulfurase; Provisional
Probab=99.89 E-value=2.3e-21 Score=193.67 Aligned_cols=321 Identities=15% Similarity=0.125 Sum_probs=204.5
Q ss_pred CCCHHHHHHHHHHHHHccccCCCC------CCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHHHHHHhchhcccC
Q 012138 91 HCHPKIMKALQEQAEKLTLSSRAF------YNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKF 162 (470)
Q Consensus 91 ~~~p~v~~a~~~~~~~~~~~~~~~------~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~~~~~~~~~~~~~ 162 (470)
..++.+.+++.+.++.....+... .....+++++.++++++ .+.|++++|+++++..++..+... ...
T Consensus 11 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~-~~~--- 86 (381)
T PRK02948 11 PMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNA-LPQ--- 86 (381)
T ss_pred CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHh-ccC---
Confidence 367899999998887543222211 12345677888888886 457999999999999998877531 000
Q ss_pred CCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccC
Q 012138 163 SIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIP 242 (470)
Q Consensus 163 ~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~ 242 (470)
+++ .|++.... |....................+...+ . ..|+++|++.+++ ++++|+++.++||+|.+.|
T Consensus 87 -~g~-~vv~~~~~-h~s~~~~~~~~~~~g~~v~~v~~~~~-~---~~d~~~l~~~l~~---~~~lv~~~~~~n~tG~~~~ 156 (381)
T PRK02948 87 -NKK-HIITTPME-HASIHSYFQSLESQGYTVTEIPVDKS-G---LIRLVDLERAITP---DTVLASIQHANSEIGTIQP 156 (381)
T ss_pred -CCC-EEEECCcc-cHHHHHHHHHHHhCCCEEEEEeeCCC-C---CCCHHHHHHhcCC---CCEEEEEECCcCCcEeehh
Confidence 233 66665544 33222211110000000000111110 1 1289999988865 6788888777999999998
Q ss_pred ChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCccee--eccccccCCCcceeEEEecHHH-HhhcCcC-
Q 012138 243 PDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGGGVIPVSAVLADKEV-MLCIQPG- 318 (470)
Q Consensus 243 ~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~--s~sK~l~gG~~~ig~v~~~~~~-~~~~~~~- 318 (470)
+++|.++|+++|+++|+|++|+ +|... +....++ .|++ +++|.+++ . .+|+++.++++ ...+...
T Consensus 157 ----~~~I~~l~~~~~~~vivD~~~~-~g~~~--~~~~~~~--~d~~~~s~~K~~gp-~-G~G~l~~~~~~~~~~~~~~~ 225 (381)
T PRK02948 157 ----IAEIGALLKKYNVLFHSDCVQT-FGKLP--IDVFEMG--IDSLSVSAHKIYGP-K-GVGAVYINPQVRWKPVFPGT 225 (381)
T ss_pred ----HHHHHHHHHHcCCEEEEEChhh-ccccc--cCcccCC--CCEEEecHHhcCCC-C-cEEEEEEcCCCCCCCcccCC
Confidence 9999999999999999998886 44221 2233344 3554 77797652 2 57888887764 1111110
Q ss_pred ---CccCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEec-----cceeEEEEecc
Q 012138 319 ---EHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG-----RGLFNAVEFDK 388 (470)
Q Consensus 319 ---~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~-----~g~~~~~~~~~ 388 (470)
.....++.|.++.+++.++++.+.+ ++..++.+++++++.+.|++++.. +. ..+ ...++.+.+..
T Consensus 226 ~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~----v~-~~~~~~~~~~~i~~~~~~~ 300 (381)
T PRK02948 226 THEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTLPLP----IE-VEGHSTSCLPHIIGVTIKG 300 (381)
T ss_pred CCCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC----EE-EeCCCccCcCCEEEEEeCC
Confidence 0112345788888888888886533 556778888888888888775321 11 111 11233333321
Q ss_pred CCCchhHHHHHHHHHHcCceeccCC-----------------------CCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 389 TALPVSAYDICLKMKERGILAKPTH-----------------------DTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 389 ~~~~~~~~~~~~~l~~~Gv~~~~~~-----------------------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
.+..++...|.++||.+..+. .+++|+++...+|++|++++++.|+++++ ++
T Consensus 301 ----~~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~-~~ 375 (381)
T PRK02948 301 ----IEGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGN-QF 375 (381)
T ss_pred ----CCHHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHH-HH
Confidence 246778888888899997532 36899999999999999999999999987 55
Q ss_pred C
Q 012138 446 P 446 (470)
Q Consensus 446 ~ 446 (470)
-
T Consensus 376 ~ 376 (381)
T PRK02948 376 Y 376 (381)
T ss_pred h
Confidence 3
No 234
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.89 E-value=7.6e-21 Score=190.03 Aligned_cols=329 Identities=16% Similarity=0.165 Sum_probs=201.3
Q ss_pred EEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCC---CCCcHHHHHHHHhh---hhC---CCeEEecCChhHHHHH
Q 012138 77 YLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAF---YNDKFPVFAERLTS---MFG---YDMVLPMNTGAEGVET 147 (470)
Q Consensus 77 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~---~~~~~~~l~~~l~~---~~~---~~~v~~~~sGteA~~~ 147 (470)
|+|..+.. ..++.|++++.+.++.....+... .......+++.+++ ..+ .++|++|+|+++++..
T Consensus 2 yld~aa~~------~~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~ 75 (382)
T TIGR03403 2 YLDNNATT------MLDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNW 75 (382)
T ss_pred cccCcCCC------CCCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHH
Confidence 56655442 257899999999887643322211 11122334443333 333 4689999999999999
Q ss_pred HHHHHHHhchhcccCCCCCcEEEEEccCccccccch--hcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCe
Q 012138 148 ALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAA--ISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 225 (470)
Q Consensus 148 al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~ 225 (470)
+++.+......+ ++++.|++....|+...... +...+.. ..+.+..++ ..+ |+++|++++++ ++
T Consensus 76 ~~~~~~~~~~~~----~~~~~vi~~~~e~ps~~~~~~~~~~~G~~---v~~v~~~~~-g~~---d~~~l~~~i~~---~t 141 (382)
T TIGR03403 76 VLKGVYFDEILK----GGKNHIITTEVEHPAVRATCAFLESLGVE---VTYLPINEQ-GTI---TAEQVREAITE---KT 141 (382)
T ss_pred HHHHHHHhhccc----CCCCEEEEcCCccHHHHHHHHHHHHCCCE---EEEEecCCC-CCC---CHHHHHHhccc---CC
Confidence 988653100001 23445666554432211111 1111111 101111111 111 78999998875 67
Q ss_pred EEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecc--ccccCCCccee
Q 012138 226 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGGGVIPVS 303 (470)
Q Consensus 226 ~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~s--K~l~gG~~~ig 303 (470)
++|++..++||+|.+.| +++|.++|++||+++|+|++|+ +|.. .+... ...+|++++| |.++ .. .+|
T Consensus 142 ~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~~ivD~a~~-~g~~--~~~~~--~~~~D~~~~s~~K~~g-p~-G~g 210 (382)
T TIGR03403 142 ALVSVMWANNETGMIFP----IKEIGEICKERGVLFHTDAVQA-IGKI--PVDVQ--KAGVDFLSFSAHKFHG-PK-GVG 210 (382)
T ss_pred eEEEEEcccCCCccccC----HHHHHHHHHHcCCEEEEechhh-cCCC--ccCcc--ccCCCEEEEcchhhCC-CC-ceE
Confidence 88887777999999998 9999999999999999999987 2211 11222 2235777666 9654 22 467
Q ss_pred EEEecHHHHhhcCcCCc-------cCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEE
Q 012138 304 AVLADKEVMLCIQPGEH-------GSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKE 374 (470)
Q Consensus 304 ~v~~~~~~~~~~~~~~~-------~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~ 374 (470)
+++.++.. .+.+... ...++.|.+++.++.++++...+ +...++.+.+++++.+.|.++ | .+..
T Consensus 211 ~l~vr~~~--~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~----~-~~~~ 283 (382)
T TIGR03403 211 GLYIRKGV--ELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLEL----P-DVFV 283 (382)
T ss_pred EEEECCCC--CCCCcccCCCCCCCcccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC----C-CEEE
Confidence 77766543 1222111 12345777788777778876654 344566667777777776553 2 3433
Q ss_pred Eecc----ceeEEEEeccCCCchhHHHHHHHHHHcCceeccCC-----------------------CCEEEEecCCCCCH
Q 012138 375 VRGR----GLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-----------------------DTIVRLTPPLSISS 427 (470)
Q Consensus 375 ~~~~----g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-----------------------~~~iR~~~~~~~t~ 427 (470)
..+. +.++.+.+.. .+...+...|.++||.++.+. .+.+|+++...+|+
T Consensus 284 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~ 359 (382)
T TIGR03403 284 VGDREHRVPNTILISIKG----VEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTE 359 (382)
T ss_pred ECCCCCCcCCEEEEEeCC----CCHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCH
Confidence 3221 3455555542 256788888989999998431 25799999999999
Q ss_pred HHHHHHHHHHHHHHhcccCCC
Q 012138 428 NELQEGSKALHDVLELDLPKM 448 (470)
Q Consensus 428 e~i~~~~~~l~~~l~~~~~~~ 448 (470)
+||+++++.|+++++ +++.+
T Consensus 360 ~did~~~~~l~~~~~-~~~~~ 379 (382)
T TIGR03403 360 EEIDYTIEVFKKAVQ-RLRAI 379 (382)
T ss_pred HHHHHHHHHHHHHHH-HHHhh
Confidence 999999999999998 76643
No 235
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.89 E-value=1.1e-21 Score=182.28 Aligned_cols=342 Identities=19% Similarity=0.225 Sum_probs=239.9
Q ss_pred EEEeecCCEEEeCCCCeEEeccCCcccccCCC-CCHHHHHHHHHHHHHcccc---CCCCC--CCcHHHHHHHHhhhhCCC
Q 012138 60 VFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGH-CHPKIMKALQEQAEKLTLS---SRAFY--NDKFPVFAERLTSMFGYD 133 (470)
Q Consensus 60 ~~~~~~g~~~~d~~G~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~---~~~~~--~~~~~~l~~~l~~~~~~~ 133 (470)
+++..-+..++ .||+.+++|.+. +.+|. .++++.+.+...+++++.+ +++|+ .+.+.+++++|++++|.+
T Consensus 80 v~e~~~~~~~~-i~G~~~~N~aS~---NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~E 155 (467)
T KOG1358|consen 80 VLESVMLPHVT-IDGKDVLNFASA---NFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGTE 155 (467)
T ss_pred ccccccCCceE-ecCceeecccch---hhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCCc
Confidence 35555566655 799999999876 33333 6789999999999987543 45554 567899999999999999
Q ss_pred eEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHH
Q 012138 134 MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITA 213 (470)
Q Consensus 134 ~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 213 (470)
..++.+-|..+++.++.+..+ .|| +|++.+.. +-....++.++. ..+..|.|||+++
T Consensus 156 ~aivYs~gF~ti~S~ipafsK---------rGD-Ii~~de~~-nfaIq~GlqlSR------------S~i~~Fkhndm~~ 212 (467)
T KOG1358|consen 156 DAIVYSYGFSTIESAIPAFSK---------RGD-IIFVDEAV-NFAIQKGLQLSR------------STISYFKHNDMED 212 (467)
T ss_pred ceeeeccccchhhhcchhhhc---------cCc-EEEEehhh-hHHHHHHHhhhh------------heeEEecCCCHHH
Confidence 988888999999999987755 244 55554433 433444443333 2256889999999
Q ss_pred HHHHHHhcC------C---C-eEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-C-CcccCCcccccc
Q 012138 214 LEKIFKESG------D---Q-IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLASDW 281 (470)
Q Consensus 214 Le~~l~~~~------~---~-~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g-~g~~G~~~~~~~ 281 (470)
||+.+.+.. + . -+-|++|.+.-++|.+.| +++|+++..||...+|.||.++ | +|++|++. .+|
T Consensus 213 lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~p----l~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGv-teH 287 (467)
T KOG1358|consen 213 LERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICP----LPEIVKLKNKYKFRVILDESLSFGVLGKTGRGV-TEH 287 (467)
T ss_pred HHHhccCcchhhhhccccccceEEEEEEeeccCCCcccc----cHHHHHHHhhheEEEEEecccccccccccCccc-ccc
Confidence 998876531 1 2 235569999999999999 9999999999999999999998 4 67888876 688
Q ss_pred CCCC---cceeecc--cccc--CCCcceeEEEecHHHHhhcCcCCccCCCC--CCHHHHHHHHHHHHHHhh-hhHHHHHH
Q 012138 282 EEVR---PDMVILG--KALG--GGVIPVSAVLADKEVMLCIQPGEHGSTFG--GNPLASAVAIASLDVIRD-EKLAERSA 351 (470)
Q Consensus 282 ~~~~---pdi~s~s--K~l~--gG~~~ig~v~~~~~~~~~~~~~~~~~t~~--~~~~~~aaa~a~l~~~~~-~~~~~~~~ 351 (470)
+++. .|+++.| -+++ ||+ .+++.-+.+.-+-...+..|+ .+|....+|..+++.+++ +++.+.++
T Consensus 288 ~~v~~~~iDiv~~sm~~alas~GgF-----c~G~~~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i~~~~p~~~~~L~ 362 (467)
T KOG1358|consen 288 FGVPITDIDIVTASMETALASGGGF-----CAGKSFIADHQRLSGSGYCFSASLPPYLAGAAIKAILIEEWNPEIVQPLR 362 (467)
T ss_pred CCCCccceeeeeecccccccccCce-----eecceeeEeeeeccccceeeeccCchhhhhhHHHHHHHHhhCcchhhhhh
Confidence 8875 3555544 3444 443 556665555555445556665 677777888888887776 56777777
Q ss_pred HHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC-----chhHHHHHHHHHHcCceeccCC----------CCE
Q 012138 352 HLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-----PVSAYDICLKMKERGILAKPTH----------DTI 416 (470)
Q Consensus 352 ~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~-----~~~~~~~~~~l~~~Gv~~~~~~----------~~~ 416 (470)
.....+...|..... ....-.....+..+.+..... -.-.+++++.+..+|+++.... +..
T Consensus 363 ~k~~~~H~~l~~~s~----~~v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pS 438 (467)
T KOG1358|consen 363 AKVAKFHAALSSNSG----FIVSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPS 438 (467)
T ss_pred ccccccchhhhcCCc----eEEecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCc
Confidence 777777777766210 111112334444444433211 0124567777777788875321 568
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 417 VRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 417 iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
+|++....+++||++++.+.|+++..
T Consensus 439 iri~~~a~~seeel~ra~~~ik~~~~ 464 (467)
T KOG1358|consen 439 IRICVSAGMSEEELERAAELIKEVAS 464 (467)
T ss_pred EEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998875
No 236
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.89 E-value=2.2e-20 Score=188.03 Aligned_cols=318 Identities=17% Similarity=0.155 Sum_probs=201.1
Q ss_pred CCHHHHHHHHHHHHHccccCC-CC------CCCcHHHHHHHHhhhhC--CCeEEecCChhHHHHHHHHHHHHhchhcccC
Q 012138 92 CHPKIMKALQEQAEKLTLSSR-AF------YNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKF 162 (470)
Q Consensus 92 ~~p~v~~a~~~~~~~~~~~~~-~~------~~~~~~~l~~~l~~~~~--~~~v~~~~sGteA~~~al~~~~~~~~~~~~~ 162 (470)
.++.+.+++.+.++.+..... .. ......++++ + ++++ .++|+|++|+|+++..+++.+... +
T Consensus 39 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g~~~~~v~~~~~~t~~l~~~~~~~~~~-----~- 110 (406)
T TIGR01814 39 MPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVGAKEDEVVVMNTLTINLHLLLASFYKP-----T- 110 (406)
T ss_pred CcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccCCCCCcEEEeCCchHHHHHHHHHhcCC-----c-
Confidence 568888888887765432211 11 1122233333 4 5666 457999999999999988865320 0
Q ss_pred CCCCcEEEEEccCccccccchh---cccCCcccccCCCCCCCCeeeecC-----CCHHHHHHHHHhcCCCeEEEEEcccc
Q 012138 163 SIDEAIIVSCCGCFHGRTLAAI---SMSCDNEAIRGFGPLLPGHLKVDF-----GDITALEKIFKESGDQIAGFLFEPIQ 234 (470)
Q Consensus 163 ~~g~~~ii~~~~~yhg~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~Le~~l~~~~~~~~~vi~epi~ 234 (470)
+++..|++....|........ ...+... ... ...++. -|++++++.++...+++++|++++++
T Consensus 111 -~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~-~~~-------~~~~~~~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~ 181 (406)
T TIGR01814 111 -PKRYKILLEAKAFPSDHYAIESQLQLHGLTV-EES-------MVQIEPREEETLRLEDILDTIEKNGDDIAVILLSGVQ 181 (406)
T ss_pred -CCccEEEecCCCCChHHHHHHHHHHhcCCCc-ccc-------eEEeccCCCCccCHHHHHHHHHhcCCCeEEEEEeccc
Confidence 123366666666543222111 1111110 000 011111 17889998886544589999999999
Q ss_pred CCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhh
Q 012138 235 GEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLC 314 (470)
Q Consensus 235 n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~ 314 (470)
+.+|.+.| +++|.++|++||+++++|++|+ +|.. .+..+.++++..+.+..|.+.||. . |+++..++....
T Consensus 182 ~~tG~~~~----~~~i~~~~~~~g~~~~vD~aq~-~G~~--~id~~~~gvD~~~~s~hK~l~g~p-G-~~l~v~~~~~~~ 252 (406)
T TIGR01814 182 YYTGQLFD----MAAITRAAHAKGALVGFDLAHA-VGNV--PLDLHDWGVDFACWCTYKYLNAGP-G-AGAFVHEKHAHT 252 (406)
T ss_pred cccceecC----HHHHHHHHHHcCCEEEEEcccc-cCCc--ccccccCCCCEEEEcCccccCCCC-C-eEEEEehhhhhh
Confidence 99999998 9999999999999999999998 2211 123344555444446669998775 5 555544433333
Q ss_pred cCcCCcc-------------C----------CCCCCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhC
Q 012138 315 IQPGEHG-------------S----------TFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQF 368 (470)
Q Consensus 315 ~~~~~~~-------------~----------t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~ 368 (470)
+.+...+ . ..+.|..+++++.++++.+.+ +.+.++.+.+.+++++.|+++....
T Consensus 253 ~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~ 332 (406)
T TIGR01814 253 ERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGP 332 (406)
T ss_pred cCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 3331111 0 113566788888889998865 5677788888888888887642100
Q ss_pred CCceEEE-----eccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEec-CCCCCHHHHHHHHHHHHHHH
Q 012138 369 PNYVKEV-----RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTP-PLSISSNELQEGSKALHDVL 441 (470)
Q Consensus 369 p~~~~~~-----~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~-~~~~t~e~i~~~~~~l~~~l 441 (470)
| .+... ...+.++.+.++ . +..++.+.|.++||.+....++.+|++| ++.+|++||++++++|++++
T Consensus 333 ~-~~~i~~~~~~~~r~~~v~~~~~--~---~~~~~~~~L~~~gi~v~~~~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 333 P-VLTIITPRDHAQRGCQLSLTHP--V---PGKAVFQALIKRGVIGDKREPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred C-ceEEeCCCChhhcCCeEEEEec--C---CHHHHHHHHHHCCEEEeccCCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 1 12111 123456666554 2 4678999999999998766567999999 68999999999999999876
No 237
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.88 E-value=1.4e-20 Score=187.78 Aligned_cols=312 Identities=14% Similarity=0.107 Sum_probs=198.7
Q ss_pred CCHHHHHHHHHHHHHccccCC--CCC-----CCcHHHHHHHHhhhhCC---CeEEecCChhHHHHHHHHHHHHhchhccc
Q 012138 92 CHPKIMKALQEQAEKLTLSSR--AFY-----NDKFPVFAERLTSMFGY---DMVLPMNTGAEGVETALKLARKWGYVKKK 161 (470)
Q Consensus 92 ~~p~v~~a~~~~~~~~~~~~~--~~~-----~~~~~~l~~~l~~~~~~---~~v~~~~sGteA~~~al~~~~~~~~~~~~ 161 (470)
.++.+.+++.+.++....... .+. .....++++.++++++. ++|++++|+++++..++....+
T Consensus 12 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~------- 84 (376)
T TIGR01977 12 KPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGLLK------- 84 (376)
T ss_pred CCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhccC-------
Confidence 567899999998876532111 111 13456788889998874 3799999999999998876433
Q ss_pred CCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCcccc
Q 012138 162 FSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVII 241 (470)
Q Consensus 162 ~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~ 241 (470)
+|+ .|++....|.........+.........+.+... ... .|++++++++++ ++++|++..++||+|.+.
T Consensus 85 --~gd-~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~---~d~~~l~~~~~~---~~~~v~~~~~~n~tG~~~ 154 (376)
T TIGR01977 85 --EGD-HVITTPMEHNSVARPLECLKEQIGVEITIVKCDN-EGL---ISPERIKRAIKT---NTKLIVVSHASNVTGTIL 154 (376)
T ss_pred --CCC-EEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC-CCC---cCHHHHHHhcCC---CCeEEEEECCCCCccccC
Confidence 455 6666666643321111001000000000001100 011 279999998865 788888777799999999
Q ss_pred CChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceee--ccccccCCCcceeEEEecHHH-HhhcCcC
Q 012138 242 PPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVI--LGKALGGGVIPVSAVLADKEV-MLCIQPG 318 (470)
Q Consensus 242 ~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s--~sK~l~gG~~~ig~v~~~~~~-~~~~~~~ 318 (470)
| +++|.++|++||+++|+|++|+ +|... +..... .+|+++ ..|.++++. ..|+++.+++. +..+..+
T Consensus 155 ~----~~~i~~l~~~~~~~livD~a~~-~g~~~--~~~~~~--~~D~~~~s~~K~l~~p~-g~g~l~~~~~~~~~~~~~~ 224 (376)
T TIGR01977 155 P----IEEIGELAQENGIFFILDAAQT-AGVIP--IDMTEL--AIDMLAFTGHKGLLGPQ-GTGGLYIREGIKLKPLKSG 224 (376)
T ss_pred C----HHHHHHHHHHcCCEEEEEhhhc-cCccC--CCchhc--CCCEEEecccccccCCC-CceEEEEcCCcCcCceecC
Confidence 8 9999999999999999999997 22211 112223 347664 459887654 56777665543 1211111
Q ss_pred Cc----------------cCCCCCCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEe---
Q 012138 319 EH----------------GSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR--- 376 (470)
Q Consensus 319 ~~----------------~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~--- 376 (470)
.. ....+.+....++..++++.+.+ +.+.++.+++.+++.+.|+++. .+....
T Consensus 225 ~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~-----~~~~~~~~~ 299 (376)
T TIGR01977 225 GTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREIN-----KVKIYGPAD 299 (376)
T ss_pred CCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC-----CeEEeCCCC
Confidence 00 00113556677777778888765 4567777888888888776532 122111
Q ss_pred --ccceeEEEEeccCCCchhHHHHHHHHHHc-CceeccC--------------CCCEEEEecCCCCCHHHHHHHHHHHHH
Q 012138 377 --GRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT--------------HDTIVRLTPPLSISSNELQEGSKALHD 439 (470)
Q Consensus 377 --~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~--------------~~~~iR~~~~~~~t~e~i~~~~~~l~~ 439 (470)
..+.++.+.+.. .+..++.+.|.++ ||.+..+ ..+.+|+++...+|++|+++++++|++
T Consensus 300 ~~~~~~~v~~~~~~----~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 300 PANRVGVVSFTVEG----IDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred ccccCCeEEEEECC----CCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 134566665532 2677899999988 9887643 247899999999999999999999975
No 238
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.88 E-value=4.8e-20 Score=185.12 Aligned_cols=321 Identities=16% Similarity=0.126 Sum_probs=199.3
Q ss_pred CCHHHHHHHHHHH-HHccccCCC--C--CCCcHHHHHH----HHhhhhCCCeEE-ecCChhHHHHHHHHHHHHhchhccc
Q 012138 92 CHPKIMKALQEQA-EKLTLSSRA--F--YNDKFPVFAE----RLTSMFGYDMVL-PMNTGAEGVETALKLARKWGYVKKK 161 (470)
Q Consensus 92 ~~p~v~~a~~~~~-~~~~~~~~~--~--~~~~~~~l~~----~l~~~~~~~~v~-~~~sGteA~~~al~~~~~~~~~~~~ 161 (470)
.||++++++...+ ++++.++.+ + -++...+|++ .+++++|.+.++ +++||+.|+.+++.++..
T Consensus 40 ~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~alv~~~SG~~A~~~~l~al~~------- 112 (416)
T PRK13034 40 TSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCDYANVQPHSGSQANGAVYLALLK------- 112 (416)
T ss_pred CCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCCceEEecCCcHHHHHHHHHHhcC-------
Confidence 4899999999985 666543221 1 1466888998 999999988885 569999999999987754
Q ss_pred CCCCCcEEEEEccCccccccchhccc-CCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEc-cccCCCcc
Q 012138 162 FSIDEAIIVSCCGCFHGRTLAAISMS-CDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFE-PIQGEAGV 239 (470)
Q Consensus 162 ~~~g~~~ii~~~~~yhg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~e-pi~n~~G~ 239 (470)
+|+ .|++...++.+........+ ....+...+.+..+.... .|+++++++++.. ++++|+++ ++ .|.
T Consensus 113 --~GD-~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~d~~~le~~l~~~--~~klVi~~~~~---~g~ 181 (416)
T PRK13034 113 --PGD-TILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGL---IDYDEVEELAKEH--KPKLIIAGFSA---YPR 181 (416)
T ss_pred --CCC-EEEEcCccceeeeecCCcceeccceeeeEEcccccccCC---cCHHHHHHHHhhc--CCeEEEECCCc---ccc
Confidence 566 77777666433122111111 000000000000000111 3899999998653 56888874 43 456
Q ss_pred ccCChhhHHHHHHHHHhcCcEEEEecccc-CCcccCCccccccCCCCccee--eccccccCCCcceeEEEecH-HHHhhc
Q 012138 240 IIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDMV--ILGKALGGGVIPVSAVLADK-EVMLCI 315 (470)
Q Consensus 240 ~~~~~~~l~~l~~l~~~~gillI~Dev~~-g~g~~G~~~~~~~~~~~pdi~--s~sK~l~gG~~~ig~v~~~~-~~~~~~ 315 (470)
..| +++|.++|++||++||+|++|+ |....|... ...+ ..|++ +++|+++|+ ..|++++++ ++.+.+
T Consensus 182 ~~d----l~~l~~la~~~g~~livD~Aha~G~~~~g~~~--~~~~-~~Di~~~s~~K~l~g~--~GG~v~~~~~~~~~~~ 252 (416)
T PRK13034 182 ELD----FARFREIADEVGALLMVDMAHIAGLVAAGEHP--NPFP-HAHVVTTTTHKTLRGP--RGGMILTNDEEIAKKI 252 (416)
T ss_pred ccC----HHHHHHHHHHcCCEEEEeCcccccCcccCCCC--CCCC-CceEEEEeCcccCCCC--CCeEEEECcHHHHHHH
Confidence 666 9999999999999999999998 432233211 1111 24655 677999754 335566654 444444
Q ss_pred CcCCccCCCC-CCHHHHH-HHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC
Q 012138 316 QPGEHGSTFG-GNPLASA-VAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL 391 (470)
Q Consensus 316 ~~~~~~~t~~-~~~~~~a-aa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~ 391 (470)
+.....+..+ ..+...+ ++.+.++.++. .++++++.++.++|++.|++++-. ... ..+...+..+.+....
T Consensus 253 ~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~G~~---~~~-~~~~t~i~~v~~~~~~- 327 (416)
T PRK13034 253 NSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKERGYD---LVS-GGTDNHLLLVDLRPKG- 327 (416)
T ss_pred HhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHcCCE---ecc-CCCCCcEEEEEcCCCC-
Confidence 4322221111 2233333 33344444432 346789999999999998875321 111 0134556666555432
Q ss_pred chhHHHHHHHHHHcCceecc----------CCCCEEEEecCC----CCCHHHHHHHHHHHHHHHhcccC
Q 012138 392 PVSAYDICLKMKERGILAKP----------THDTIVRLTPPL----SISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 392 ~~~~~~~~~~l~~~Gv~~~~----------~~~~~iR~~~~~----~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
.....+.+.|.++||++.+ ..+..+|++++. .++++|++++++.|.+++. +..
T Consensus 328 -~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~-~~~ 394 (416)
T PRK13034 328 -LSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLD-DLG 394 (416)
T ss_pred -CCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHh-cCC
Confidence 2556677888889999863 224579999887 7789999999999999998 653
No 239
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.88 E-value=5e-20 Score=181.96 Aligned_cols=319 Identities=13% Similarity=0.152 Sum_probs=200.1
Q ss_pred CeEEeccCCcccccCCC--CCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHH
Q 012138 75 NKYLDFLSAYSAVNQGH--CHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLA 152 (470)
Q Consensus 75 ~~~lD~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~ 152 (470)
+.+||-...+ .++|. .++++.+++.+.++.+. ...+...++++++++++|.+++++++|+++|+.++++.+
T Consensus 8 ~~~ina~g~~--t~~g~s~~~~~v~~a~~~~~~~~~-----~~~~~~~~~~~~~a~~~g~~~~~~~~g~t~al~~al~al 80 (363)
T TIGR01437 8 KKVINASGKM--TILGVSTVSDEVADAQKRGAQNYF-----EIKELVNKTGEYIANLLGVEDAVIVSSASAGIAQSVAAV 80 (363)
T ss_pred ceEEECCcEe--ecCCCCCCCHHHHHHHHHHHhcCC-----CHHHHHHHHHHHHHHhhCCCeEEEEcCHHHHHHHHHHHH
Confidence 3455544333 33444 48999999999876532 134567889999999999999999999999999999977
Q ss_pred HHhchhcccCCCCC--------------cEEEEEccCcccc--c-cchhcccC-CcccccCCCCCCCCeeeecCCCHHHH
Q 012138 153 RKWGYVKKKFSIDE--------------AIIVSCCGCFHGR--T-LAAISMSC-DNEAIRGFGPLLPGHLKVDFGDITAL 214 (470)
Q Consensus 153 ~~~~~~~~~~~~g~--------------~~ii~~~~~yhg~--~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~L 214 (470)
.. +|+ +.||+..+.|... . ...+.+.+ .+.+ .+. + .. -|++++
T Consensus 81 ~~---------~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~----v~~--~-~~---~d~~~l 141 (363)
T TIGR01437 81 IT---------RGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVE----AGY--A-NE---CSAEQL 141 (363)
T ss_pred hc---------CCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEE----EcC--C-CC---CCHHHH
Confidence 54 343 1455555444322 1 11222222 1111 000 0 01 289999
Q ss_pred HHHHHhcCCCeEEEE-EccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCccee--ec
Q 012138 215 EKIFKESGDQIAGFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--IL 291 (470)
Q Consensus 215 e~~l~~~~~~~~~vi-~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~--s~ 291 (470)
++++++ ++++++ ++..+|++|.+.| +++|.++|++||+++|+|++|+. ... ....++ .|++ ++
T Consensus 142 e~ai~~---~t~ai~~v~~~~~~~g~~~~----~~~i~~~a~~~gi~vivD~a~~~---~~~--~~~~~g--~D~~~~S~ 207 (363)
T TIGR01437 142 EAAITE---KTAAILYIKSHHCVQKSMLS----VEDAAQVAQEHNLPLIVDAAAEE---DLQ--KYYRLG--ADLVIYSG 207 (363)
T ss_pred HHhcCh---hceEEEEEecCCCCcCCcCC----HHHHHHHHHHcCCeEEEECCCCC---chH--HHHHcC--CCEEEEeC
Confidence 999986 677766 5655889999997 99999999999999999999971 111 011223 3666 45
Q ss_pred cccccCCCcceeEEEecHHHHhhcCcCCcc--CCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhh
Q 012138 292 GKALGGGVIPVSAVLADKEVMLCIQPGEHG--STFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQ 367 (470)
Q Consensus 292 sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~--~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~ 367 (470)
+|.++ |. +.|++++++++++.+....++ ..+......+++..++++.+.+ .+..+...++.+++.+.|.++.
T Consensus 208 ~K~l~-gp-~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~~L~~i~-- 283 (363)
T TIGR01437 208 AKAIE-GP-TSGLVLGKKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTPFIEALNTLK-- 283 (363)
T ss_pred CcccC-CC-ceEEEEEcHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHhcCC--
Confidence 58886 44 789988888888766432221 1122222344555556666543 2333444445566777776642
Q ss_pred CCCceEEE---eccce---eEEEEeccCCCchhHHHHHHHHHHcC--ceecc--CCCCEEEEecCCCCCHHHHHHHHHHH
Q 012138 368 FPNYVKEV---RGRGL---FNAVEFDKTALPVSAYDICLKMKERG--ILAKP--THDTIVRLTPPLSISSNELQEGSKAL 437 (470)
Q Consensus 368 ~p~~~~~~---~~~g~---~~~~~~~~~~~~~~~~~~~~~l~~~G--v~~~~--~~~~~iR~~~~~~~t~e~i~~~~~~l 437 (470)
.+... ...+. ...+.++....+.+..++.+.|.++| |.+.+ ...+.+||.+.. .+++|++.++++|
T Consensus 284 ---g~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~~-~~~~e~~~~~~~l 359 (363)
T TIGR01437 284 ---GVSASIVQDEAGRDIARAEIRFDESELGMTAADVVQALRQGEPAIYTRGYKANEGIIEIDPRS-VTGGQLDIIVERI 359 (363)
T ss_pred ---CeEEEEecCCCCCcCceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEeeeeecCCeEEEEeec-CCHHHHHHHHHHH
Confidence 22222 11111 12233433111347899999999877 66653 357789999874 6699999999999
Q ss_pred HHHH
Q 012138 438 HDVL 441 (470)
Q Consensus 438 ~~~l 441 (470)
++++
T Consensus 360 ~~~~ 363 (363)
T TIGR01437 360 REIV 363 (363)
T ss_pred HHhC
Confidence 8764
No 240
>PLN02368 alanine transaminase
Probab=99.88 E-value=2.4e-21 Score=193.28 Aligned_cols=243 Identities=10% Similarity=0.103 Sum_probs=166.9
Q ss_pred CCcHHHHHHHHhhhhC----CCeEEecCChhHHHHHHHHHHH-HhchhcccCCCCCcEEEEEccCccccccchhcccCCc
Q 012138 116 NDKFPVFAERLTSMFG----YDMVLPMNTGAEGVETALKLAR-KWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDN 190 (470)
Q Consensus 116 ~~~~~~l~~~l~~~~~----~~~v~~~~sGteA~~~al~~~~-~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~ 190 (470)
.++++.+++++.+..| .++|++|+|+++++..+++++. . +|+ .|++..|+|..........+...
T Consensus 110 ~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~---------pGd-~Vli~~P~Y~~y~~~~~~~g~~~ 179 (407)
T PLN02368 110 PGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRG---------EKD-GVLVPVPQYPLYSATISLLGGTL 179 (407)
T ss_pred HHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCC---------CCC-EEEEeCCCCccHHHHHHHcCCEE
Confidence 4567777777776544 4689999999999999998775 3 455 78889999976654443333221
Q ss_pred ccccCCCCCCC-CeeeecCCCHHHHHHHHHhc---CCCeEEEE-EccccCCCccccCChhhHHHHHHHHHhcCcEEEEec
Q 012138 191 EAIRGFGPLLP-GHLKVDFGDITALEKIFKES---GDQIAGFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 265 (470)
Q Consensus 191 ~~~~~~~~~~~-~~~~~~~~d~~~Le~~l~~~---~~~~~~vi-~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~De 265 (470)
.. . +... +.+.+ |+++|++.+++. ..++++++ ++| +||||.++ +.+.+++|.++|++||++||+||
T Consensus 180 v~-v---~~~~~~~~~~---d~~~le~~i~~~~~~~~~~k~l~l~nP-~NPTG~v~-s~e~l~~l~~~a~~~~~~II~DE 250 (407)
T PLN02368 180 VP-Y---YLEESENWGL---DVNNLRQSVAQARSKGITVRAMVIINP-GNPTGQCL-SEANLREILKFCYQERLVLLGDE 250 (407)
T ss_pred EE-E---ecccccCCCC---CHHHHHHHHHHHhhcCCCeEEEEEECC-CCCCCccC-CHHHHHHHHHHHHHcCCEEEEEc
Confidence 10 0 1111 01122 799999998742 12577555 677 99999999 99999999999999999999999
Q ss_pred cccCCcccCC--cccc-c---cCC--C--Ccce---eeccccc-c-CCCcceeEEE---ecHHHHhhcCcCCccCCCCCC
Q 012138 266 IQSGLARSGR--MLAS-D---WEE--V--RPDM---VILGKAL-G-GGVIPVSAVL---ADKEVMLCIQPGEHGSTFGGN 327 (470)
Q Consensus 266 v~~g~g~~G~--~~~~-~---~~~--~--~pdi---~s~sK~l-~-gG~~~ig~v~---~~~~~~~~~~~~~~~~t~~~~ 327 (470)
+|..+.+.+. .... + ..+ . .+.+ -+|||++ + +|+ |+||++ +++++++.+.... ..+++.+
T Consensus 251 ~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~Gl-RiGy~i~~~~~~~li~~~~~~~-~~~~~~~ 328 (407)
T PLN02368 251 VYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQ-RGGYFEMTNIPPKTVEEIYKVA-SIALSPN 328 (407)
T ss_pred cccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCcc-ceEEEEEeCCCHHHHHHHHHHh-cccCCCC
Confidence 9998765542 2111 1 010 0 1122 3889998 4 899 999998 4888888876542 3456778
Q ss_pred HHHHHHHHHHHHH-----------Hhh-hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEE
Q 012138 328 PLASAVAIASLDV-----------IRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV 384 (470)
Q Consensus 328 ~~~~aaa~a~l~~-----------~~~-~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~ 384 (470)
.+++.++.++|+. .++ .++.+.++++++.+.+.|+++ +.+....++|.|+.|
T Consensus 329 ~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~-----~g~~~~~P~Gafy~~ 392 (407)
T PLN02368 329 VSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSC-----KNVVCNFTEGAMYSF 392 (407)
T ss_pred cHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCeEeCCCCeeeEec
Confidence 8888888888752 111 235566677777777777664 246667789999888
No 241
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.88 E-value=3e-20 Score=184.88 Aligned_cols=318 Identities=12% Similarity=0.065 Sum_probs=201.7
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCC----CeEEecCChhHHHHHHHHHHHHhchhcccCCCCCc
Q 012138 92 CHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGY----DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEA 167 (470)
Q Consensus 92 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~----~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~ 167 (470)
..+.+.+++.+.. .+.... +.+...++.+.++++++. +.+++++||+++++.++..+.. +++
T Consensus 16 ~~~~~~~a~~~~~---~~~~~~-~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~---------~~~- 81 (368)
T PRK13479 16 TSRTVREAMLRDW---GSWDDD-FNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVP---------RDG- 81 (368)
T ss_pred CCHHHHHHhCCCC---CCCChH-HHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccC---------CCC-
Confidence 4567777665543 111111 224567888888888865 3478999999999999987753 455
Q ss_pred EEEEEccCcccccc-chhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhh
Q 012138 168 IIVSCCGCFHGRTL-AAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY 246 (470)
Q Consensus 168 ~ii~~~~~yhg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~ 246 (470)
.+++..++|.+... ......+.... ..+...+ .. .|+++++++++++ .++++|++..++|++|.+.|
T Consensus 82 ~vlv~~~~~~~~~~~~~~~~~g~~~~---~i~~~~~-~~---~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~~---- 149 (368)
T PRK13479 82 KVLVPDNGAYGARIAQIAEYLGIAHV---VLDTGED-EP---PDAAEVEAALAAD-PRITHVALVHCETTTGILNP---- 149 (368)
T ss_pred eEEEEeCCchHHHHHHHHHHcCCcEE---EEECCCC-CC---CCHHHHHHHHHhC-CCCcEEEEEcccCccccccC----
Confidence 44444445444321 11111111111 0111000 11 2799999998753 24566665555999999998
Q ss_pred HHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCccee--eccccccCCCcceeEEEecHHHHhhcCcCC-----
Q 012138 247 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGE----- 319 (470)
Q Consensus 247 l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~--s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~----- 319 (470)
+++|.++|+++|+++|+|++|+ +|.. ......++ +|++ +++|++.|+. ++|++++++++++.+....
T Consensus 150 ~~~i~~l~~~~~~~livDa~~~-~g~~--~~~~~~~~--~d~~v~s~~K~l~g~~-G~G~l~~~~~~~~~~~~~~~~~~~ 223 (368)
T PRK13479 150 LDEIAAVAKRHGKRLIVDAMSS-FGAI--PIDIAELG--IDALISSANKCIEGVP-GFGFVIARRSELEACKGNSRSLSL 223 (368)
T ss_pred HHHHHHHHHHcCCEEEEEcccc-cCCc--cccccccC--ceEEEecCccccccCC-CceEEEECHHHHHHhhcCCCCeee
Confidence 9999999999999999998774 5422 22233333 4554 6779887665 6799999999887765432
Q ss_pred ------------ccCCCCCCHHHHHHHHHHHHHHhh----hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEE
Q 012138 320 ------------HGSTFGGNPLASAVAIASLDVIRD----EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNA 383 (470)
Q Consensus 320 ------------~~~t~~~~~~~~aaa~a~l~~~~~----~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~ 383 (470)
....|+.+....+++.++++.+.+ ++..++++++++++++.|++++... ........+....
T Consensus 224 ~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~--~~~~~~~~~~~~~ 301 (368)
T PRK13479 224 DLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGFEP--LLDAEIQSPIIVT 301 (368)
T ss_pred cHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcc--cCCchhcCceEEE
Confidence 112246777777777788887643 3455677777888888877753221 0110001122233
Q ss_pred EEeccCCCchhHHHHHHHHHHcCceeccCC---CCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 384 VEFDKTALPVSAYDICLKMKERGILAKPTH---DTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~---~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
+.+.... +.+..++.++|.++||.+.++. .+.+|++....+++++++++++.|+++++ ++
T Consensus 302 ~~~~~~~-~~~~~~l~~~L~~~gi~v~~g~~~~~~~iRis~~~~~t~edi~~~l~~L~~~l~-~~ 364 (368)
T PRK13479 302 FHAPADP-AYDFKEFYERLKEQGFVIYPGKLTQVDTFRIGCIGDVDAADIRRLVAAIAEALY-WM 364 (368)
T ss_pred EECCCCC-CcCHHHHHHHHHHCCEEEecCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHH-Hc
Confidence 3233221 1256789999999999998753 45899986556799999999999999998 65
No 242
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.88 E-value=3.1e-20 Score=186.64 Aligned_cols=330 Identities=13% Similarity=0.171 Sum_probs=203.8
Q ss_pred CeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCC-------CCcHHHHHHHHhhhhCC--CeEEecCChhHHH
Q 012138 75 NKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFY-------NDKFPVFAERLTSMFGY--DMVLPMNTGAEGV 145 (470)
Q Consensus 75 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~-------~~~~~~l~~~l~~~~~~--~~v~~~~sGteA~ 145 (470)
+.|+|..+. +..++.+.+++.+.++.....+.... .+..+++++.+++++|. +.++|++|+++++
T Consensus 4 ~~yld~aa~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~ 77 (402)
T TIGR02006 4 PIYLDYAAT------TPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESN 77 (402)
T ss_pred cEEeeCCcC------CCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHH
Confidence 468887654 22578999999888754322211111 12355677888888875 4799999999999
Q ss_pred HHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCe
Q 012138 146 ETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 225 (470)
Q Consensus 146 ~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~ 225 (470)
+.+++.+... ... +++ .|++.... |.+................+.+..++ ..+ |+++|++++++ ++
T Consensus 78 ~~~l~~l~~~-~~~----~g~-~Vi~~~~~-h~s~~~~~~~~~~~g~~v~~v~~~~~-~~~---d~~~l~~~l~~---~~ 143 (402)
T TIGR02006 78 NLAIKGIAHF-YKS----KGN-HIITSKTE-HKAVLDTCRYLEREGFEVTYLPPKSN-GLI---DLEELKAAIRD---DT 143 (402)
T ss_pred HHHHHHHHHh-hcC----CCC-EEEECCCc-cHHHHHHHHHHHhcCCEEEEEccCCC-CcC---CHHHHHHhcCC---CC
Confidence 9998866431 011 344 66666655 44433222110000111101111111 111 78999998865 67
Q ss_pred EEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecc--ccccCCCccee
Q 012138 226 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGGGVIPVS 303 (470)
Q Consensus 226 ~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~s--K~l~gG~~~ig 303 (470)
++|++..++|++|.+.| +++|.++|++||+++++|++|+ +|.. . ++..+..+|++++| |.++ .. .+|
T Consensus 144 ~lv~v~~~~n~tG~~~~----~~~I~~l~~~~g~~livD~a~a-~g~~--~--~~~~~~~~D~~~~s~~K~~g-p~-G~G 212 (402)
T TIGR02006 144 ILVSIMHVNNEIGVIQD----IAAIGEICRERKVFFHVDAAQS-VGKI--P--INVNELKVDLMSISGHKIYG-PK-GIG 212 (402)
T ss_pred EEEEEECCCcCceeccc----HHHHHHHHHHcCCEEEEEcchh-cCCc--c--cCccccCCCEEEEehhhhcC-CC-ceE
Confidence 88888888999999998 9999999999999999999997 2211 1 22223456888888 9664 33 688
Q ss_pred EEEecHHHHhhcCcCCcc-------CCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEE
Q 012138 304 AVLADKEVMLCIQPGEHG-------STFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKE 374 (470)
Q Consensus 304 ~v~~~~~~~~~~~~~~~~-------~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~ 374 (470)
+++.+++....+.+...+ ...+.+...+.+..++++.+.+ +...++.+++.+++.+.|+++. .+..
T Consensus 213 ~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~-----~v~~ 287 (402)
T TIGR02006 213 ALYVRRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKSIE-----EVYL 287 (402)
T ss_pred EEEEccCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCC-----CEEE
Confidence 888887655444433222 1124566677777788887654 3455667777777777776532 2221
Q ss_pred E---ecc-ceeEEEEeccCCCchhHHHHHHHHHHcCceeccC-----------------------CCCEEEEecCCCCCH
Q 012138 375 V---RGR-GLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-----------------------HDTIVRLTPPLSISS 427 (470)
Q Consensus 375 ~---~~~-g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----------------------~~~~iR~~~~~~~t~ 427 (470)
. ... ...+.+.+.. ....++...| +++.+..+ ..+.+|+++...+|+
T Consensus 288 ~~~~~~~~p~~~~v~f~~----~~~~~~~~~l--~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~ 361 (402)
T TIGR02006 288 NGDLEHRVPGNLNVSFNY----VEGESLIMAL--KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTE 361 (402)
T ss_pred eCCccccCCCeEEEEEeC----cCHHHHHHhc--CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCH
Confidence 1 101 1111232332 1344555554 35543321 137899999999999
Q ss_pred HHHHHHHHHHHHHHhcccCC
Q 012138 428 NELQEGSKALHDVLELDLPK 447 (470)
Q Consensus 428 e~i~~~~~~l~~~l~~~~~~ 447 (470)
+||+++++.|.++++ +++.
T Consensus 362 edid~l~~~l~~~~~-~~~~ 380 (402)
T TIGR02006 362 EEIDYAVKLVKSAID-KLRE 380 (402)
T ss_pred HHHHHHHHHHHHHHH-HHHh
Confidence 999999999999998 7654
No 243
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.88 E-value=2.3e-20 Score=187.17 Aligned_cols=318 Identities=17% Similarity=0.133 Sum_probs=209.5
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCC---CeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcE
Q 012138 92 CHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGY---DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAI 168 (470)
Q Consensus 92 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~---~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ 168 (470)
.+++|++++.+... .+.. ....+.+++++++++++++. +.++++++|+++++.++..... +|+ .
T Consensus 20 ~~~~V~~a~~~~~~--~~~~-~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~---------~Gd-~ 86 (401)
T PLN02409 20 IPERVLRAMNRPNE--DHRS-PAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLS---------PGD-K 86 (401)
T ss_pred CCHHHHHHhcCCCC--CCCC-HHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCC---------CCC-E
Confidence 45777777644321 1111 11234567788888888764 3589999999999999876543 566 5
Q ss_pred EEEEccCccccccc-hhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcC-CCeEEEEEccccCCCccccCChhh
Q 012138 169 IVSCCGCFHGRTLA-AISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGY 246 (470)
Q Consensus 169 ii~~~~~yhg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~-~~~~~vi~epi~n~~G~~~~~~~~ 246 (470)
|++.+++|.+.... .....+.... +.+...+ ..+ |++++++++++.. .++++|++..+.|++|.+.|
T Consensus 87 Vlv~~~~~~~~~~~~~~~~~g~~v~---~v~~~~~-~~~---~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~---- 155 (401)
T PLN02409 87 VVSFRIGQFSLLWIDQMQRLNFDVD---VVESPWG-QGA---DLDILKSKLRQDTNHKIKAVCVVHNETSTGVTND---- 155 (401)
T ss_pred EEEeCCCchhHHHHHHHHHcCCceE---EEECCCC-CCC---CHHHHHHHHhhCcCCCccEEEEEeecccccccCC----
Confidence 66666665443321 1111111100 0011000 011 7899999998621 26888888887999999997
Q ss_pred HHHHHHH--HHhcCcEEEEeccccCCcccCCccccccCCCCccee--eccccccCCCcceeEEEecHHHHhhcCcCCc--
Q 012138 247 LKAVRDL--CSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEH-- 320 (470)
Q Consensus 247 l~~l~~l--~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~--s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~-- 320 (470)
+++|.++ |+++|+++|+|++|+ +|. ..+..+.+++ |++ +.+|+++++. ++|+++.++++++.+.+...
T Consensus 156 ~~~i~~l~~~~~~g~~~vvD~v~s-~g~--~~id~~~~~~--D~~~~s~~K~l~~P~-G~G~l~~~~~~~~~~~~~~~~~ 229 (401)
T PLN02409 156 LAGVRKLLDCAQHPALLLVDGVSS-IGA--LDFRMDEWGV--DVALTGSQKALSLPT-GLGIVCASPKALEASKTAKSPR 229 (401)
T ss_pred HHHHHHHHhhhccCcEEEEEcccc-cCC--ccccccccCc--cEEEEcCccccCcCC-CcceeEECHHHHHHHhcCCCCC
Confidence 8888888 999999999999997 321 1122333444 555 5569998776 89999999998877643210
Q ss_pred -------------cC---CCCCCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEE-e-ccc
Q 012138 321 -------------GS---TFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEV-R-GRG 379 (470)
Q Consensus 321 -------------~~---t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~-~-~~g 379 (470)
.. .++.+...+.++.++++.+.+ +.+.++.+++.+++++.|++++.. .+... . ..+
T Consensus 230 ~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~---~~~~~~~~~s~ 306 (401)
T PLN02409 230 VFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLK---LCTKKPEWRSD 306 (401)
T ss_pred eecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCe---eccCChhhccc
Confidence 11 335667778888888888655 567788888888888888775322 11110 1 122
Q ss_pred eeEEEEeccCCCchhHHHHHHHHHHc-CceeccC----CCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccC
Q 012138 380 LFNAVEFDKTALPVSAYDICLKMKER-GILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~----~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
.+.++.+... .+..++.+.|.++ |+.+.++ .+..+|++....++++++..++++|++++. ++.
T Consensus 307 ~v~~~~~p~~---~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~-~~g 374 (401)
T PLN02409 307 TVTAVVVPEG---IDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLK-DVG 374 (401)
T ss_pred ceEEEeCCCC---CCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHH-HcC
Confidence 3344444332 3667888887654 9998865 367899999989999999999999999999 765
No 244
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.87 E-value=1.1e-19 Score=181.29 Aligned_cols=311 Identities=15% Similarity=0.117 Sum_probs=197.9
Q ss_pred CCHHHHHHHHHHHHHccccCCCCC--CCcHHHHHHHHhhhhCCC--eEEecCChhHHHHHHHHHHHHhchhcccCCCCCc
Q 012138 92 CHPKIMKALQEQAEKLTLSSRAFY--NDKFPVFAERLTSMFGYD--MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEA 167 (470)
Q Consensus 92 ~~p~v~~a~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~--~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~ 167 (470)
++|.+.+++...++.....+..+. .+...++++++++++|.+ .+++++||++++..++.++.......+ +|+
T Consensus 32 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~g~- 107 (373)
T TIGR03812 32 PHPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEK---RTP- 107 (373)
T ss_pred chHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccC---CCc-
Confidence 567778877776544221122121 234578889999999864 578899999999998876653211100 233
Q ss_pred EEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecC-----CCHHHHHHHHHhcCCCe-EEEEEccccCCCcccc
Q 012138 168 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF-----GDITALEKIFKESGDQI-AGFLFEPIQGEAGVII 241 (470)
Q Consensus 168 ~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~Le~~l~~~~~~~-~~vi~epi~n~~G~~~ 241 (470)
.|++.+++|... .......+-. +..+++ .|+++|++++++ ++ +++++.| +|++|.+.
T Consensus 108 ~vl~~~~~h~~~-~~~~~~~G~~------------~~~v~~~~~~~~d~~~l~~~l~~---~~~~vv~~~~-~~~tG~~~ 170 (373)
T TIGR03812 108 NIIVPESAHFSF-EKAAEMLGLE------------LRYAPLDEDYTVDVKDVEDLIDD---NTIGIVGIAG-TTELGQID 170 (373)
T ss_pred EEEECCcchHHH-HHHHHHcCCe------------EEEEeeCCCCCcCHHHHHHHHhh---CcEEEEEECC-CCCCCccC
Confidence 677777775432 2222222211 122222 289999999976 44 4555666 89999999
Q ss_pred CChhhHHHHHHHHHhcCcEEEEeccccCCccc----CCc-cccccCCCCcceeecc--ccccCCCcceeEEE-ecHHHHh
Q 012138 242 PPDGYLKAVRDLCSKYNILMIADEIQSGLARS----GRM-LASDWEEVRPDMVILG--KALGGGVIPVSAVL-ADKEVML 313 (470)
Q Consensus 242 ~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~----G~~-~~~~~~~~~pdi~s~s--K~l~gG~~~ig~v~-~~~~~~~ 313 (470)
| +++|.++|++||+++|+|++|+++... |.. ...+..-...|.++++ |...++. |.|+++ .++++++
T Consensus 171 ~----~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~-~~G~~~~~~~~~~~ 245 (373)
T TIGR03812 171 D----IEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPI-PAGGILFRSKSYLK 245 (373)
T ss_pred C----HHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcC-CceEEEEeCHHHHh
Confidence 8 999999999999999999999853210 000 0011110123555443 7444555 787655 6777777
Q ss_pred hcCcCC---ccC-----CCCCCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeE
Q 012138 314 CIQPGE---HGS-----TFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN 382 (470)
Q Consensus 314 ~~~~~~---~~~-----t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~ 382 (470)
.+.... ... ..+.+...++++.++++.+.+ +++.++..++++++++.|++++ ......+...++
T Consensus 246 ~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g-----~~~~~~~~~~~v 320 (373)
T TIGR03812 246 YLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIG-----FEPVIEPVLNIV 320 (373)
T ss_pred hhcccCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCC-----CeEEcCCCceEE
Confidence 663211 010 013455677788888887755 3467888888888988888753 211223344455
Q ss_pred EEEeccCCCchhHHHHHHHHHHcCceeccC-CCCEEEEecCCCCCHHHHHHHHHHHHH
Q 012138 383 AVEFDKTALPVSAYDICLKMKERGILAKPT-HDTIVRLTPPLSISSNELQEGSKALHD 439 (470)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-~~~~iR~~~~~~~t~e~i~~~~~~l~~ 439 (470)
.+.++ ...++.+.|.++||.+... .++++|++++..+|++|+++++++|++
T Consensus 321 ~~~~~------~~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 321 AFEVD------DPEEVRKKLRDRGWYVSVTRCPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred EEEeC------CHHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 55433 2457999999999999866 467999999888999999999999975
No 245
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.87 E-value=6.3e-21 Score=189.11 Aligned_cols=288 Identities=17% Similarity=0.173 Sum_probs=193.0
Q ss_pred CCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccc
Q 012138 114 FYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAI 193 (470)
Q Consensus 114 ~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 193 (470)
+.++...+|++.++++.|.+.+++++||++|+..++..+.. +|+ .|++..+.|++...........
T Consensus 37 ~~~p~~~~le~~la~l~g~~~a~~~~sG~~Ai~~~l~~l~~---------~gd-~Vl~~~~~y~~~~~~~~~~~~~---- 102 (369)
T cd00614 37 IGNPTVDALEKKLAALEGGEAALAFSSGMAAISTVLLALLK---------AGD-HVVASDDLYGGTYRLFERLLPK---- 102 (369)
T ss_pred CCChhHHHHHHHHHHHHCCCCEEEEcCHHHHHHHHHHHHcC---------CCC-EEEECCCCcchHHHHHHHHHhh----
Confidence 45778899999999999988999999999999999987754 455 6777778876543211100000
Q ss_pred cCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCccc
Q 012138 194 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS 273 (470)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~ 273 (470)
....+..++.+|++++++++++ ++++|++|.++||+|.+.| +++|.++|++||+++|+|++++....
T Consensus 103 -----~g~~~~~v~~~d~~~l~~~i~~---~~~~v~~e~~~np~g~~~d----l~~i~~la~~~g~~livD~t~~~~~~- 169 (369)
T cd00614 103 -----LGIEVTFVDPDDPEALEAAIKP---ETKLVYVESPTNPTLKVVD----IEAIAELAHEHGALLVVDNTFATPYL- 169 (369)
T ss_pred -----cCeEEEEeCCCCHHHHHHhcCC---CCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCcchhc-
Confidence 0012456677789999999875 7899999999999999998 99999999999999999999873211
Q ss_pred CCccccccCCCCccee--eccccccC-C-CcceeEEEecH-HHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHH
Q 012138 274 GRMLASDWEEVRPDMV--ILGKALGG-G-VIPVSAVLADK-EVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAE 348 (470)
Q Consensus 274 G~~~~~~~~~~~pdi~--s~sK~l~g-G-~~~ig~v~~~~-~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~ 348 (470)
. .......|++ |++|.++| | . +.|++++++ ++++.++..........+++.++++...|+.+ +...+
T Consensus 170 ~-----~~~~~g~Divv~S~tK~l~g~~~~-~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~tl--~~r~~ 241 (369)
T cd00614 170 Q-----RPLELGADIVVHSATKYIGGHSDV-IAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKTL--PLRME 241 (369)
T ss_pred C-----ChhhhCCcEEEeccceeccCCCCc-eEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCCH--HHHHH
Confidence 1 1112234665 88899985 3 4 789999977 88777764433334456788777776666533 23456
Q ss_pred HHHHHHHHHHHHHHHHHh----hCCCceE---------EEeccceeEEEEeccCCCchhHHHHHHHHHHcCceec-----
Q 012138 349 RSAHLGEELRQHLFKIQQ----QFPNYVK---------EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK----- 410 (470)
Q Consensus 349 ~~~~~~~~l~~~L~~l~~----~~p~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----- 410 (470)
+..++..++.+.|++... .||.... ...+.|.++.+.+..+. ....+|.+.|+--.+.++
T Consensus 242 ~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~--~~~~~f~~~l~~~~~~~s~G~~~ 319 (369)
T cd00614 242 RHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGL--EAAKKFLNALKLFSLAVSLGGVE 319 (369)
T ss_pred HHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCH--HHHHHHHHcCCcceEcccCCCCc
Confidence 666677777777766431 1221000 12356889999886321 245556555542211110
Q ss_pred -----cC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 411 -----PT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 411 -----~~-----------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
|. .++.+|+++.+ |+.+++++.|.++++
T Consensus 320 sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGl----E~~~dl~~dl~~al~ 369 (369)
T cd00614 320 SLVEHPASMTHSQLPPEERAAAGITPGLVRLSVGI----EDVEDLIADLEQALK 369 (369)
T ss_pred eeeeCCcccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHhhC
Confidence 10 14689999655 678888888887763
No 246
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.87 E-value=9.2e-20 Score=163.98 Aligned_cols=308 Identities=14% Similarity=0.201 Sum_probs=195.9
Q ss_pred CCCcHHHHHHHHhhhhCC----CeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCc
Q 012138 115 YNDKFPVFAERLTSMFGY----DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDN 190 (470)
Q Consensus 115 ~~~~~~~l~~~l~~~~~~----~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~ 190 (470)
...+...+++.+.+.+|+ +.+.+||+...|-..+..++.. ++..| ..+++++...|.|-|.....+. +
T Consensus 76 ~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G--~~sdG--~~k~illPLaPeYiGY~d~~l~----~ 147 (417)
T COG3977 76 KAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAG--RRSDG--TEKKILLPLAPEYIGYADAGLE----E 147 (417)
T ss_pred hhHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcC--ccCCC--cceeEeeccChhhccccccccC----c
Confidence 345577888888888875 4699999988888887776643 33322 2234555688888776443321 1
Q ss_pred ccccCCCC---CCCCeeeecC-CCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecc
Q 012138 191 EAIRGFGP---LLPGHLKVDF-GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 266 (470)
Q Consensus 191 ~~~~~~~~---~~~~~~~~~~-~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev 266 (470)
.....+.| ..+ -..++| -|.++|+ +. +.+.+|++.-+.||||.+. +.+++.+|-.+|++||++||+|.+
T Consensus 148 d~fVs~kP~iel~~-~g~FKY~vDF~~l~--i~---e~~g~ic~SRPtNPTGNVl-TdeE~~kldalA~~~giPliIDnA 220 (417)
T COG3977 148 DLFVSAKPNIELLP-AGQFKYHVDFEHLH--IG---ESTGAICVSRPTNPTGNVL-TDEELAKLDALARQHGIPLIIDNA 220 (417)
T ss_pred cceeeccCCccccc-ccceeeccCHHHcc--cc---cccceEEecCCCCCCCCcc-cHHHHHHHHHHhhhcCCcEEEecc
Confidence 11111111 111 122232 2777764 22 3789999888899999999 999999999999999999999999
Q ss_pred ccCCcccCCccccccCCCCccee---eccccccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHH---
Q 012138 267 QSGLARSGRMLASDWEEVRPDMV---ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDV--- 340 (470)
Q Consensus 267 ~~g~g~~G~~~~~~~~~~~pdi~---s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~--- 340 (470)
|+ .-+.+-.|.-...-..++++ |+||.--+|. |+|.++++++++..+.+...--......++.|.+...++.
T Consensus 221 Yg-~PFP~iifsd~~~~w~~NiilC~SLSK~GLPG~-R~GIiIane~viqaitnmn~iisLap~~~G~Aia~~mie~gdl 298 (417)
T COG3977 221 YG-VPFPGIIFSDATPLWNENIILCMSLSKLGLPGS-RCGIIIANEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDL 298 (417)
T ss_pred cC-CCCCceecccccccCCCCEEEEeehhhcCCCCc-ceeEEEccHHHHHHHHhccceeeecCCCccHHHHHHHhhcchH
Confidence 97 21233223111111133443 6777655787 9999999999999887653322233333344444333321
Q ss_pred --HhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCC-----
Q 012138 341 --IRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----- 413 (470)
Q Consensus 341 --~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~----- 413 (470)
+.++-++.-+++..+.....|+.-...+| ....+++|.++.| +...+.+.+.+++.++|+++||++.|++
T Consensus 299 ~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~--~~iHkpEGAIFlW-LWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpG 375 (417)
T COG3977 299 LRLSEQVIRPFYRNRVQTTIAILRRYLPEYR--CLIHKPEGAIFLW-LWFKDLPITTEELYQRLKARGVLMVPGHYFFPG 375 (417)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHhcCccc--eeeecCCcceeeh-hhhccCCCCHHHHHHHHHhCeEEEecccccCCC
Confidence 11111222223333333333332222222 4456889998888 5444445689999999999999999874
Q ss_pred --------CCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 414 --------DTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 414 --------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
..++|++ ++-++++|+..+.+|.+.++ +.
T Consensus 376 l~~ewpH~hqC~Rmn--~~~~~~~ie~Gva~lae~ve-~~ 412 (417)
T COG3977 376 LDKEWPHTHQCMRMN--YVPEPEKIEKGVAILAEEVE-RA 412 (417)
T ss_pred CCCCCCCccceEEEe--cCCCHHHHHHHHHHHHHHHH-HH
Confidence 5789999 88999999999999999887 53
No 247
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.87 E-value=7e-21 Score=180.18 Aligned_cols=309 Identities=20% Similarity=0.268 Sum_probs=216.7
Q ss_pred CCCCCHHHHHHHHHHHHHccccC---C--CCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCC
Q 012138 89 QGHCHPKIMKALQEQAEKLTLSS---R--AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFS 163 (470)
Q Consensus 89 lG~~~p~v~~a~~~~~~~~~~~~---~--~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~ 163 (470)
.|.+++.+.+++ +++++.. + ....+.+.++++..+++.|.+..+.++-|...|.+-+..+..
T Consensus 153 ~g~ca~~~~~~~----~kygl~~css~~e~G~~~~hkelE~l~A~f~g~e~a~vF~mGf~TNs~~~p~l~~--------- 219 (519)
T KOG1357|consen 153 VGPCAEASLKSF----DKYGLSRCSSRHEAGTTEEHKELEELVARFLGVEDAIVFSMGFATNSMNIPSLLG--------- 219 (519)
T ss_pred CCcCChHHHHHH----HHhcccccccchhcccHHHHHHHHHHHHHhcCCcceEEEeccccccccCcceeec---------
Confidence 344555555554 4444332 1 235677899999999999999888888888888777775553
Q ss_pred CCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhc----------CCCeEEEEEccc
Q 012138 164 IDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKES----------GDQIAGFLFEPI 233 (470)
Q Consensus 164 ~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~----------~~~~~~vi~epi 233 (470)
+ ...|++.+-+ |++......+++. .+..++|||+.+||++|++. +.+.-.|++|.+
T Consensus 220 ~-gsLIiSDelN-HaSi~~GaRLSgA------------tiRVfkHNdm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegi 285 (519)
T KOG1357|consen 220 K-GSLIISDELN-HASLITGARLSGA------------TTRVFRHNDMQGLERLLRDAIVYGQPKTHRPWKKILICVEGI 285 (519)
T ss_pred C-Ccceeecccc-chheeccccccCc------------eEEEEecCCHHHHHHHHHHHHhcCCCCcCCcchheeeeeccc
Confidence 3 3477887777 9888887777763 24688999999999999873 123446778999
Q ss_pred cCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-C-CcccCCccccccCCCCc---cee--ecccccc--CCCcceeE
Q 012138 234 QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLASDWEEVRP---DMV--ILGKALG--GGVIPVSA 304 (470)
Q Consensus 234 ~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g-~g~~G~~~~~~~~~~~p---di~--s~sK~l~--gG~~~ig~ 304 (470)
.++.|.+.. +++++.+++||.++|+.||+|+ | .|++|+.. ++.++++| |++ +|.|+++ || +
T Consensus 286 ysmEg~iv~----Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgv-ce~~g~d~~dvDImMGtftKSfga~GG-----y 355 (519)
T KOG1357|consen 286 YSMEGTIVD----LPEVVALKKKYKAYLYLDEAHSIGAMGATGRGV-CEYFGVDPEDVDIMMGTFTKSFGAAGG-----Y 355 (519)
T ss_pred eeccCeecc----cHHHHHhhccccEEEEeeccccccccCCCCcce-eeccCCCchhheeecceehhhcccccc-----e
Confidence 999999998 9999999999999999999999 4 66788764 67777754 444 8889987 44 4
Q ss_pred EEecHHHHhhcCcCCccCCCC--CCHHHHHHHHHHHHHHhh-------hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEE
Q 012138 305 VLADKEVMLCIQPGEHGSTFG--GNPLASAVAIASLDVIRD-------EKLAERSAHLGEELRQHLFKIQQQFPNYVKEV 375 (470)
Q Consensus 305 v~~~~~~~~~~~~~~~~~t~~--~~~~~~aaa~a~l~~~~~-------~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~ 375 (470)
+.+++++++.++.......+. .+|+.+.-...+++.+.- ....+++.++..+++..|+..+ ++..-
T Consensus 356 iagsk~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~g-----fivyG 430 (519)
T KOG1357|consen 356 IAGSKELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMG-----FIVYG 430 (519)
T ss_pred ecCcHHHHhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCc-----EEEec
Confidence 899999999998665555543 455555555566666542 3456677778888887777642 12111
Q ss_pred eccceeEEEEeccCCCchhHHHHHHHHHHcCceec----cC---CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 376 RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK----PT---HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 376 ~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~~---~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
........+.+-.+. .-..+.+.|+++++.+. |. -....||+.+..++.|+++++++.+.+.=+
T Consensus 431 ~~dSpVvplll~~~~---k~~~f~r~~l~~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~ 501 (519)
T KOG1357|consen 431 NNDSPVVPLLLYGPA---KIVAFSREMLERNIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRVGD 501 (519)
T ss_pred CCCCCcceeeecCcc---cccHHHHHHHhcCceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhch
Confidence 111211222121221 45567888888865543 22 246779999999999999999998877654
No 248
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.86 E-value=9.6e-20 Score=181.35 Aligned_cols=309 Identities=16% Similarity=0.227 Sum_probs=208.3
Q ss_pred CCCHHHHHHHHHHHHHccccC-CCC------CCCcHHHHHHHHhhhhCC---CeEEecCChhHHHHHHHHHHHHhchhcc
Q 012138 91 HCHPKIMKALQEQAEKLTLSS-RAF------YNDKFPVFAERLTSMFGY---DMVLPMNTGAEGVETALKLARKWGYVKK 160 (470)
Q Consensus 91 ~~~p~v~~a~~~~~~~~~~~~-~~~------~~~~~~~l~~~l~~~~~~---~~v~~~~sGteA~~~al~~~~~~~~~~~ 160 (470)
..++.|.+++.+.+......+ ... ..+..+++.+.++++++. +.|+|++|++++++.++..+... .
T Consensus 10 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~-~--- 85 (371)
T PF00266_consen 10 PMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNP-L--- 85 (371)
T ss_dssp B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHH-G---
T ss_pred CCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhccccc-c---
Confidence 367899999999887654322 111 123345777888888864 45999999999999999977431 0
Q ss_pred cCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecC---CCHHHHHHHHHhcCCCeEEEEEccccCCC
Q 012138 161 KFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF---GDITALEKIFKESGDQIAGFLFEPIQGEA 237 (470)
Q Consensus 161 ~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~~Le~~l~~~~~~~~~vi~epi~n~~ 237 (470)
++++ .|++....|++.......+......... ....+. -|++++++.++. ++++|++..+.+.+
T Consensus 86 --~~g~-~vl~~~~~~~s~~~~~~~~~~~~g~~v~-------~i~~~~~~~~~~~~~~~~l~~---~~~lv~~~~~~~~t 152 (371)
T PF00266_consen 86 --KPGD-EVLVTSNEHPSNRYPWEEIAKRKGAEVR-------VIPADPGGSLDLEDLEEALNP---DTRLVSISHVENST 152 (371)
T ss_dssp --TTTC-EEEEEESSHHHHHHHHHHHHHHTTEEEE-------EEEEGTTSSCSHHHHHHHHHT---TESEEEEESBETTT
T ss_pred --cccc-ccccccccccccccccccccccchhhhc-------cccccccchhhhhhhhhhhcc---ccceEEeecccccc
Confidence 1344 7777777765544221111100001000 011111 178999999975 89999999989999
Q ss_pred ccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecc--ccccCCCcceeEEEecHHHHhhc
Q 012138 238 GVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCI 315 (470)
Q Consensus 238 G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~s--K~l~gG~~~ig~v~~~~~~~~~~ 315 (470)
|...| +++|.++|+++|+++++|.+|+ +|.. .+.++. ..+|++++| | +.|+. .+|+++.+++..+.+
T Consensus 153 G~~~p----i~~I~~~~~~~~~~~~vD~~~~-~g~~--~id~~~--~~~D~~~~s~~K-l~gp~-G~g~l~v~~~~~~~~ 221 (371)
T PF00266_consen 153 GVRNP----IEEIAKLAHEYGALLVVDAAQS-AGCV--PIDLDE--LGADFLVFSSHK-LGGPP-GLGFLYVRPEAIERL 221 (371)
T ss_dssp TBBSS----HHHHHHHHHHTTSEEEEE-TTT-TTTS--S--TTT--TTESEEEEESTS-TTSSS-TEEEEEEEHHHHHHH
T ss_pred cEEee----eceehhhhhccCCceeEechhc-cccc--cccccc--cccceeeecccc-cCCCC-chhhheehhhhhhcc
Confidence 99999 9999999999999999999998 3211 122333 345777655 9 88886 899999999998888
Q ss_pred CcCCccCC------------------C---CCCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCc
Q 012138 316 QPGEHGST------------------F---GGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNY 371 (470)
Q Consensus 316 ~~~~~~~t------------------~---~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~p~~ 371 (470)
++...+.. | +.+.....+...+++.+.+ +.+.++..++.+++.+.|.++.... .
T Consensus 222 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~--~ 299 (371)
T PF00266_consen 222 RPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIE--V 299 (371)
T ss_dssp HTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEE--E
T ss_pred ccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCcee--E
Confidence 54322221 1 3566677777788888754 5677778888888888887753210 0
Q ss_pred e--EEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCC------------CCEEEEecCCCCCHHHHHHH
Q 012138 372 V--KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------------DTIVRLTPPLSISSNELQEG 433 (470)
Q Consensus 372 ~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------------~~~iR~~~~~~~t~e~i~~~ 433 (470)
+ ......+.++.+.+.. .+...+.+.|.++||.+..+. .+.+|+++...+|++||+++
T Consensus 300 ~~~~~~~~~~~i~~~~~~~----~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 300 LGPDDEPRRPSIVSFNLPG----SDADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp SSSSCGGBGTTEEEEEETT----SSHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred eeecccccccceEEEeecC----CCHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 0 1123456677776743 267899999999999988642 37999999999999999975
No 249
>PLN02242 methionine gamma-lyase
Probab=99.86 E-value=1.9e-20 Score=187.39 Aligned_cols=294 Identities=12% Similarity=0.128 Sum_probs=188.9
Q ss_pred CCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccc
Q 012138 114 FYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAI 193 (470)
Q Consensus 114 ~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 193 (470)
+.++...+|+++++++.|.+.+++++||++|+..++..+.+ +|+ .|++..+.|.+...........
T Consensus 73 ~~~Pt~~~LE~~lA~l~g~~~~l~~~sG~~Ai~~al~al~~---------~GD-~Vl~~~~~Y~~~~~~~~~~~~~---- 138 (418)
T PLN02242 73 HFNPTVLNLGRQMAALEGTEAAYCTASGMSAISSVLLQLCS---------SGG-HVVASNTLYGGTHALLAHFLPR---- 138 (418)
T ss_pred CCChhHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhC---------CCC-EEEEcCCcHHHHHHHHHHhhhh----
Confidence 45778899999999999999999999999999999987765 566 6777777764332111000000
Q ss_pred cCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCccc
Q 012138 194 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS 273 (470)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~ 273 (470)
........++..|++++++++++. ++++|+++.++||+|.+.+ +++|.++|++||++||+||+|+.+...
T Consensus 139 ----~~G~~~~~~d~~d~e~l~~~i~~~--~tklV~lesp~NPtG~v~d----l~~I~~la~~~gi~livDea~~~~~~~ 208 (418)
T PLN02242 139 ----KCNITTTFVDITDLEAVKKAVVPG--KTKVLYFESISNPTLTVAD----IPELARIAHEKGVTVVVDNTFAPMVLS 208 (418)
T ss_pred ----ccCceEEEcCCCCHHHHHHhcCcC--CCEEEEEecCCCCCCcccC----HHHHHHHHHHhCCEEEEECCCCccCCC
Confidence 000112344445899999988652 4899999898999999998 999999999999999999999744221
Q ss_pred CCccccccCCCCcceeeccccccC-CCcc-eeEEEecHHHHhhcCcCCcc--CCCCCCHHHHHHHHHHHHHHhh-hhHHH
Q 012138 274 GRMLASDWEEVRPDMVILGKALGG-GVIP-VSAVLADKEVMLCIQPGEHG--STFGGNPLASAVAIASLDVIRD-EKLAE 348 (470)
Q Consensus 274 G~~~~~~~~~~~pdi~s~sK~l~g-G~~~-ig~v~~~~~~~~~~~~~~~~--~t~~~~~~~~aaa~a~l~~~~~-~~~~~ 348 (470)
...++.+.-+.+|+|.+++ |. + .|++++++++++.+.....+ ..++..+..+.++...+. +.. +..++
T Consensus 209 -----~~~~g~divv~S~SK~l~g~g~-~~gG~iv~~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~-l~tl~~r~~ 281 (418)
T PLN02242 209 -----PARLGADVVVHSISKFISGGAD-IIAGAVCGPAELVNSMMDLHHGALMLLGPTMNPKVAFELSER-LPHLSLRMK 281 (418)
T ss_pred -----HHHcCCcEEEEeCccccCCCCC-ceEEEEEcCHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcC-CCcHHHHHH
Confidence 1122332234488999984 55 5 58899999988887654332 122222223333332222 211 33556
Q ss_pred HHHHHHHHHHHHHHHHHh--hCCCce---------EEE---eccceeEEEEeccCCCchhHHHHHHHHHHc----Cceec
Q 012138 349 RSAHLGEELRQHLFKIQQ--QFPNYV---------KEV---RGRGLFNAVEFDKTALPVSAYDICLKMKER----GILAK 410 (470)
Q Consensus 349 ~~~~~~~~l~~~L~~l~~--~~p~~~---------~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~----Gv~~~ 410 (470)
+.++++.++.+.|++... .||... ... .+.|.++.+++... ..+.+|++.|.-- .+.+.
T Consensus 282 ~~~~~a~~la~~L~~~~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~~---~~~~~f~~~l~~~~~~~~~~~s 358 (418)
T PLN02242 282 EHCRRAMEYAKRMKELGLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDTE---ERANRLMRYLQNSTQFGFMAVS 358 (418)
T ss_pred HHHHHHHHHHHHHHhCCCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECCH---HHHHHHHHHhhcccccceeeec
Confidence 777788888888877531 222100 011 25688999988532 3567787777621 11111
Q ss_pred ----------cC-----------------CCCEEEEecCCCCCHHH-HHHHHHHHHHHHhcccC
Q 012138 411 ----------PT-----------------HDTIVRLTPPLSISSNE-LQEGSKALHDVLELDLP 446 (470)
Q Consensus 411 ----------~~-----------------~~~~iR~~~~~~~t~e~-i~~~~~~l~~~l~~~~~ 446 (470)
|. .++.+||+..+ |+ .+.+++-|+++|+ +++
T Consensus 359 lG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl----E~~~~dli~dl~~al~-~~~ 417 (418)
T PLN02242 359 LGYYETLMSCSGSSTSSELDPEEKAAAGISPGLVRMSVGY----TGTLEQRWSQFEKALS-AMK 417 (418)
T ss_pred CCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecC----CCCHHHHHHHHHHHHH-Hhh
Confidence 10 14689999544 53 7888888888887 653
No 250
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.86 E-value=5.4e-20 Score=171.89 Aligned_cols=328 Identities=19% Similarity=0.206 Sum_probs=204.8
Q ss_pred EeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhch
Q 012138 78 LDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGY 157 (470)
Q Consensus 78 lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~ 157 (470)
+||.|....- ++|++++++.++-.... ......+...++++++++.++...++|+.|||+||..+|....+
T Consensus 2 ~~f~SDn~~g----~~~~m~eam~~a~~~~~--~~YG~D~~~~~~e~~~ae~~g~~a~~Fv~sGT~aN~lal~~~~~--- 72 (342)
T COG2008 2 IDFRSDNVAG----PTPEMREALAAANAVGD--DVYGEDPTTNALEQRIAELFGKEAALFVPSGTQANQLALAAHCQ--- 72 (342)
T ss_pred CccccCccCC----CCHHHHHHHHhccccCC--CCCCCCHHHHHHHHHHHHHhCCceEEEecCccHHHHHHHHHhcC---
Confidence 4666654332 68999999987653211 11123556789999999999999999999999999999997765
Q ss_pred hcccCCCCCcEEEEEccCccccccch--hcccCCcccccCCCCCCC-CeeeecCCCHHHHHHHHHhc---CCCeEEEEEc
Q 012138 158 VKKKFSIDEAIIVSCCGCFHGRTLAA--ISMSCDNEAIRGFGPLLP-GHLKVDFGDITALEKIFKES---GDQIAGFLFE 231 (470)
Q Consensus 158 ~~~~~~~g~~~ii~~~~~yhg~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~Le~~l~~~---~~~~~~vi~e 231 (470)
|++ .||+...+ |-.+... ....+.. .. .+..+ ....+ ++++++..+... ...+..++.+
T Consensus 73 ------~~~-~vi~~~~a-Hi~~~E~Ga~~~~~~~-~~---~~~~~g~~Gkl---t~e~v~~~i~~~d~~~~~~~~~~~e 137 (342)
T COG2008 73 ------PGE-SVICHETA-HIYTDECGAPEFFGGG-QK---LPIVPGADGKL---TPEDVEAAIRPDDIHHAPTPLAVLE 137 (342)
T ss_pred ------CCC-eEEEeccc-cceecccCcHHHHcCC-ce---eccCCCCCCCc---CHHHHHHhhcCCCcccCCCceEEEe
Confidence 455 55554433 5443321 1111100 00 01111 11222 799999988742 1244555544
Q ss_pred cccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccC--CcccCCccccccCCCCcceeeccccccCCCcceeEEE-ec
Q 012138 232 PIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG--LARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVL-AD 308 (470)
Q Consensus 232 pi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g--~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~-~~ 308 (470)
..+++.|+++ |.++|++|.++|++||+.|+.|-+.-. ....| .+...+.--.|+++|+-+-++|. ++|+|+ ++
T Consensus 138 ~~~te~GtVy-~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg--~~~~~~~~~~D~v~~~~tK~g~~-~~gAiv~gn 213 (342)
T COG2008 138 NTATEGGTVY-PLDELEAISAVCKEHGLPLHMDGARLANALVALG--VALKTIKSYVDSVSFCLTKGGGA-PVGAIVFGN 213 (342)
T ss_pred eccCCCceec-CHHHHHHHHHHHHHhCCceeechHHHHHHHHHcC--CCHHHHHhhCCEEEEecccCCcc-eeeeEEEcC
Confidence 4477999999 999999999999999999999976531 11112 11122222348887766656666 777766 78
Q ss_pred HHHHhhcCcC--CccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEE-eccceeEEEE
Q 012138 309 KEVMLCIQPG--EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVE 385 (470)
Q Consensus 309 ~~~~~~~~~~--~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~-~~~g~~~~~~ 385 (470)
.++++.++.. ..+..+...-+..+....+|+..--.....|...++.+|.+.+++. | .+... +.+..++.+.
T Consensus 214 ~~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~----~-G~~~~~~~~tN~vf~~ 288 (342)
T COG2008 214 RDFAKRARRWRKRAGGLMRKARFLAAQGLYALEDDVWRLAADHANAMAARLAEGLEAK----P-GVKLAFPVETNMVFVR 288 (342)
T ss_pred HHHHHHHHHHHHHhcccHhhhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhhhc----C-CceeccCCcccEEEEE
Confidence 8888776432 3455555555555555555542111122334444566677766642 1 23322 3567777776
Q ss_pred eccCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 012138 386 FDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 441 (470)
Q Consensus 386 ~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l 441 (470)
++... .........+...|+++.+.+ ..+||..++.+|+++|++++..+++++
T Consensus 289 l~~~~--i~~l~~~~~~~~~~~~~~~~~-~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 289 LPESA--IEALRLAGALFYRGVLIGAHG-EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred CChHH--HHHHHhhchhheeeeeccCCC-ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 65432 234444556666677776554 689999999999999999999998765
No 251
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.86 E-value=8.8e-20 Score=183.70 Aligned_cols=328 Identities=17% Similarity=0.177 Sum_probs=195.9
Q ss_pred CeEEeccCCcccccCCCCCHHHHHHHHHHH-HHccccC---CCC-CCCcHHH----HHHHHhhhhCCCeE-EecCChhHH
Q 012138 75 NKYLDFLSAYSAVNQGHCHPKIMKALQEQA-EKLTLSS---RAF-YNDKFPV----FAERLTSMFGYDMV-LPMNTGAEG 144 (470)
Q Consensus 75 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~-~~~~~~~---~~~-~~~~~~~----l~~~l~~~~~~~~v-~~~~sGteA 144 (470)
+++|++..+-.. .+|++++++.+.+ ..+..+. ..+ ..+...+ .+++++++++.+.. ++++||++|
T Consensus 19 ~~~~~~~~~~~~-----~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~sgt~a 93 (402)
T cd00378 19 RETLELIASENF-----TSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANVQPHSGSQA 93 (402)
T ss_pred HhCeeeeccCCc-----CCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceeeecCCcHHH
Confidence 456666655322 4799999998765 3332211 111 1122222 33456677876543 444578999
Q ss_pred HHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccch----hcccCCcccccCCCCCCCC--eeeecCCCHHHHHHHH
Q 012138 145 VETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAA----ISMSCDNEAIRGFGPLLPG--HLKVDFGDITALEKIF 218 (470)
Q Consensus 145 ~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~----~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~Le~~l 218 (470)
+..++..+.. +|+ .|++..++|.+..... ....+. +....++..+ ...+ |++++++++
T Consensus 94 ~~~~l~~l~~---------~Gd-~Vl~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~i---d~~~l~~~i 157 (402)
T cd00378 94 NLAVYFALLE---------PGD-TIMGLDLSHGGHLTHGSFTKVSASGK---LFESVPYGVDPETGLI---DYDALEKMA 157 (402)
T ss_pred HHHHHHHhcC---------CCC-EEEEecCccCccccccccccccccce---eEEEecCCcCcccCCc---CHHHHHHHH
Confidence 9999987754 566 7888888875432221 111111 0000111111 1222 899999998
Q ss_pred HhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-CCcccCCcc-ccccCCCCccee--ecccc
Q 012138 219 KESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRML-ASDWEEVRPDMV--ILGKA 294 (470)
Q Consensus 219 ~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g~g~~G~~~-~~~~~~~~pdi~--s~sK~ 294 (470)
.+. ++++|++.+.++ |...+ +++|.++|++||+++|+||+|. |+...|... ... ..|++ +++|+
T Consensus 158 ~~~--~~~~v~~~~~~~--~~~~~----~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~----~~dv~~~s~sK~ 225 (402)
T cd00378 158 LEF--KPKLIVAGASAY--PRPID----FKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP----GADVVTTTTHKT 225 (402)
T ss_pred HhC--CCCEEEecCccc--CCCcC----HHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc----CCcEEEeccccC
Confidence 653 567777544344 45555 9999999999999999999974 543333211 111 23554 78899
Q ss_pred ccCCCcceeEEEecH-HHHhhcCcCCccCCCCC-CHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhCC
Q 012138 295 LGGGVIPVSAVLADK-EVMLCIQPGEHGSTFGG-NPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFP 369 (470)
Q Consensus 295 l~gG~~~ig~v~~~~-~~~~~~~~~~~~~t~~~-~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~p 369 (470)
+ +|. +.|++++++ ++++.+........++. .....+++..++..+.. ++++++++++.+++.+.|.+++
T Consensus 226 l-~G~-~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g---- 299 (402)
T cd00378 226 L-RGP-RGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERG---- 299 (402)
T ss_pred C-CCC-CceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCC----
Confidence 9 566 889999876 88877754322222332 22333333334443322 4566777888888888887642
Q ss_pred CceEEE-e-ccceeEEEEeccCCCchhHHHHHHHHHHcCceeccC----------CCCEEEEecCCC----CCHHHHHHH
Q 012138 370 NYVKEV-R-GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----------HDTIVRLTPPLS----ISSNELQEG 433 (470)
Q Consensus 370 ~~~~~~-~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----------~~~~iR~~~~~~----~t~e~i~~~ 433 (470)
+... . ..+.++++.+.... .+...+.+.|.++||.+.+. ..+.+|+++... +++++++++
T Consensus 300 --~~~~~~~~~~~~v~v~~~~~~--~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~ 375 (402)
T cd00378 300 --FKVVSGGTDNHLVLVDLRPKG--ITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEI 375 (402)
T ss_pred --CeEeecCCCCeEEEEeCCccC--CCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHH
Confidence 2221 2 23555555554221 24567778888889998631 346899987653 479999999
Q ss_pred HHHHHHHHhcccC
Q 012138 434 SKALHDVLELDLP 446 (470)
Q Consensus 434 ~~~l~~~l~~~~~ 446 (470)
++.|.++++ +-+
T Consensus 376 ~~~l~~~~~-~~~ 387 (402)
T cd00378 376 ADFIARALK-DAE 387 (402)
T ss_pred HHHHHHHHh-ccc
Confidence 999999998 654
No 252
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.86 E-value=1.1e-19 Score=180.03 Aligned_cols=307 Identities=16% Similarity=0.168 Sum_probs=199.7
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHH-HHhchhcccCCCCCcEEEEE
Q 012138 94 PKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLA-RKWGYVKKKFSIDEAIIVSC 172 (470)
Q Consensus 94 p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~-~~~~~~~~~~~~g~~~ii~~ 172 (470)
++..+++.+.+.....+. ..+...+++++++++++.+++++++||++|+..+++++ .. +|+ .||+.
T Consensus 11 ~~e~~a~~~~~~~~~~~~---~g~~~~~~e~~la~~~g~~~~v~~~sgt~aL~~~l~al~~~---------pGd-~Viv~ 77 (376)
T TIGR02379 11 GQELEYIAEAISEGKLSG---DGPFSRRCETWLENRTGTKKALLTPSCTAALEMAALLLDIQ---------PGD-EVIMP 77 (376)
T ss_pred HHHHHHHHHHHHcCCccC---CcHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCC---------CcC-EEEEC
Confidence 556778888776644321 24567899999999999999999999999999888765 22 555 78888
Q ss_pred ccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHH
Q 012138 173 CGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRD 252 (470)
Q Consensus 173 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~ 252 (470)
.++|.+........+..+. +.+..++...+ |++++++++++ ++++|+ | .+++|...+ +++|.+
T Consensus 78 ~~t~~~~~~~~~~~G~~~v----~vd~d~~~~~~---d~~~le~~i~~---~tk~Ii--p-~~~~G~~~d----~~~I~~ 140 (376)
T TIGR02379 78 SYTFVSTANAFVLRGAKIV----FVDIRPDTMNI---DETLIESAITH---RTKAIV--P-VHYAGVACD----MDTIMA 140 (376)
T ss_pred CCCcHHHHHHHHHcCCEEE----EEecCCCcCCC---CHHHHHHhcCc---CceEEE--E-eCCCCCccC----HHHHHH
Confidence 8887654333332222111 12221222222 78999998875 788886 3 567899987 999999
Q ss_pred HHHhcCcEEEEeccccCCc-ccCCccccccCCCCcceeecc----ccccCCCcceeEEEec-HHHHhhcCcCC-------
Q 012138 253 LCSKYNILMIADEIQSGLA-RSGRMLASDWEEVRPDMVILG----KALGGGVIPVSAVLAD-KEVMLCIQPGE------- 319 (470)
Q Consensus 253 l~~~~gillI~Dev~~g~g-~~G~~~~~~~~~~~pdi~s~s----K~l~gG~~~ig~v~~~-~~~~~~~~~~~------- 319 (470)
+|++||++||+|++|+-.. ..|+. .+..-|+.+|| |.++.|. +.|+++.+ +++.+.++...
T Consensus 141 la~~~~i~vIeDaa~~~g~~~~~~~-----~g~~~~~~~fSf~~~K~l~~g~-~gG~v~~~~~~~~~~~~~~~~~g~~~~ 214 (376)
T TIGR02379 141 LANKHQLFVIEDAAQGVMSTYKGRA-----LGSIGHLGTFSFHETKNYTSGG-EGGALLINDQAFIERAEIIREKGTNRS 214 (376)
T ss_pred HHHHCCCEEEEECccccCCccCCcc-----cCCCCCEEEEeCCCCCcCcccC-CceEEEECCHHHHHHHHHHHHhCCCCc
Confidence 9999999999999998221 22321 22233777888 8888776 78887764 77777664321
Q ss_pred --------------ccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh----hCCCceEEEecccee
Q 012138 320 --------------HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYVKEVRGRGLF 381 (470)
Q Consensus 320 --------------~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~----~~p~~~~~~~~~g~~ 381 (470)
.+..+-.+.+.++.+.+.|+.+.+ +.++.++..+++.+.|..+.. ..|.........-.+
T Consensus 215 ~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~~--~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 292 (376)
T TIGR02379 215 QFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQADR--INQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHM 292 (376)
T ss_pred cccccCCCcceeeeecccCCccHHHHHHHHHHHHHhHH--HHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEE
Confidence 133344667787777777776644 556666677777777765421 111111011111123
Q ss_pred EEEEeccCCCchhHHHHHHHHHHcCceeccC----C----------------------CCEEEEecCCCCCHHHHHHHHH
Q 012138 382 NAVEFDKTALPVSAYDICLKMKERGILAKPT----H----------------------DTIVRLTPPLSISSNELQEGSK 435 (470)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----~----------------------~~~iR~~~~~~~t~e~i~~~~~ 435 (470)
+.+.++.. .+..++.+.|.++||.+... + .+.+.+-.....|++|+++.++
T Consensus 293 ~~i~~~~~---~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~ 369 (376)
T TIGR02379 293 FYIKLKDE---DDRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQ 369 (376)
T ss_pred EEEEECCc---CCHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHH
Confidence 34444332 25789999999999986521 1 2234444445689999999999
Q ss_pred HHHHHH
Q 012138 436 ALHDVL 441 (470)
Q Consensus 436 ~l~~~l 441 (470)
.|++++
T Consensus 370 ~i~~~~ 375 (376)
T TIGR02379 370 TICDYL 375 (376)
T ss_pred HHHHHh
Confidence 998875
No 253
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.86 E-value=3.7e-20 Score=184.40 Aligned_cols=284 Identities=17% Similarity=0.160 Sum_probs=186.7
Q ss_pred CCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCccc
Q 012138 113 AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEA 192 (470)
Q Consensus 113 ~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~ 192 (470)
.+.++...+|++.++++.|.+..++++||+.|+..++..+.. +|+ .|++..+.| +.+.......... +
T Consensus 57 r~~~pt~~~Le~~lA~l~G~~~al~~~sG~~Ai~~~l~al~~---------~Gd-~Vv~~~~~y-~~~~~~~~~~~~~-~ 124 (386)
T PRK06767 57 RLGNPTVKLFEERMAVLEGGEEALAFGSGMAAISATLIGFLK---------AGD-HIICSNGLY-GCTYGFLEVLEEK-F 124 (386)
T ss_pred CCCCcchHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhC---------CCC-EEEEcCCcH-HHHHHHHHHHHhh-c
Confidence 345677899999999999988899999999999888876654 465 677766664 4433322211100 0
Q ss_pred ccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcc
Q 012138 193 IRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR 272 (470)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~ 272 (470)
+ ..+..++..|++++++++++ ++++|++|.++||+|.+.+ +++|.++|+++|+++|+|++|+.. .
T Consensus 125 ----g---i~~~~~~~~d~~~l~~~i~~---~tklV~lesp~NptG~v~d----l~~I~~la~~~g~~vivD~a~a~~-~ 189 (386)
T PRK06767 125 ----M---ITHSFCDMETEADIENKIRP---NTKLIFVETPINPTMKLID----LKQVIRVAKRNGLLVIVDNTFCSP-Y 189 (386)
T ss_pred ----C---eEEEEeCCCCHHHHHHhhCc---CceEEEEeCCCCCCceecC----HHHHHHHHHHcCCEEEEECCCccc-c
Confidence 0 01223333478999988875 7899998888999999998 999999999999999999999621 1
Q ss_pred cCCccccccCCCCccee--eccccccC-CCcce-eEEEecHHHHhhcCcC-CccCCCCCCHHHHHHHHHHHHHHhhhhHH
Q 012138 273 SGRMLASDWEEVRPDMV--ILGKALGG-GVIPV-SAVLADKEVMLCIQPG-EHGSTFGGNPLASAVAIASLDVIRDEKLA 347 (470)
Q Consensus 273 ~G~~~~~~~~~~~pdi~--s~sK~l~g-G~~~i-g~v~~~~~~~~~~~~~-~~~~t~~~~~~~~aaa~a~l~~~~~~~~~ 347 (470)
.+... ..+. |++ +++|.++| |. ++ |+++++++.++.+... .....-..+++.++++...|+.+. ...
T Consensus 190 ~~~pl---~~g~--Div~~S~sK~l~g~g~-~~gG~v~~~~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~tl~--~r~ 261 (386)
T PRK06767 190 LQRPL---ELGC--DAVVHSATKYIGGHGD-VVAGVTICKTRALAEKIRPMRKDIGGIMAPFDAWLLLRGLKTLA--VRM 261 (386)
T ss_pred cCCch---hcCC--cEEEecCcceecCCCC-ceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCcHH--HHH
Confidence 12111 1233 554 77799985 55 64 7888888877654321 111111246666666655554332 345
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCceEE------------EeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccC---
Q 012138 348 ERSAHLGEELRQHLFKIQQQFPNYVKE------------VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT--- 412 (470)
Q Consensus 348 ~~~~~~~~~l~~~L~~l~~~~p~~~~~------------~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--- 412 (470)
++.++++.++.+.|++.. .+.. .++.|.++.++++... ....+|.+.|+..++.++-|
T Consensus 262 ~~~~~~a~~la~~L~~~p-----~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~--~~~~~f~~~l~~~~~~~s~G~~~ 334 (386)
T PRK06767 262 DRHCDNAEKIVSFLKNHD-----AVEGVWYPEGELASRQMKRGGGVISFSIKGGK--EETQAFINDLHFITIAVSLGDTE 334 (386)
T ss_pred HHHHHHHHHHHHHHHcCC-----CccEEECCCcHHHHHhCCCCCceEEEEEcCCH--HHHHHHHHhCCccEEecCCCCcC
Confidence 666777777777776642 2222 2356788888886321 35778888887666554322
Q ss_pred ------------------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 413 ------------------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 413 ------------------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
.++.+||++.+ |+.+.+++-|.++|.
T Consensus 335 sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl----E~~~dl~~dl~~al~ 384 (386)
T PRK06767 335 TLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGL----ESWEDIVSDLEQALK 384 (386)
T ss_pred ccccCCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHh
Confidence 14689999554 567777777777775
No 254
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.86 E-value=2.8e-19 Score=167.59 Aligned_cols=284 Identities=17% Similarity=0.200 Sum_probs=183.3
Q ss_pred CCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCC
Q 012138 131 GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD 210 (470)
Q Consensus 131 ~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (470)
..+++++++++|.|+++.+-.+.. ||+ ..++..|-|.|......-.++....-. .-...+...+ +
T Consensus 145 dP~~~Vv~~G~T~ane~l~fcLad---------pgd-afLvPtPyY~gfdrdl~~rTgveivpv--~c~Ss~~f~i---t 209 (471)
T KOG0256|consen 145 DPERVVVTNGATSANETLMFCLAD---------PGD-AFLVPTPYYPGFDRDLRWRTGVEIVPV--HCSSSNGFQI---T 209 (471)
T ss_pred CccceEEecccchhhHHHHHHhcC---------CCc-eeeecCCCCCcccccceeccCceEEEE--EeecCCCccc---c
Confidence 457899999999999998877665 566 777888888776443332222110000 0000011122 5
Q ss_pred HHHHHHHHHhc---CCCeEEEE-EccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcc-cc-cc---
Q 012138 211 ITALEKIFKES---GDQIAGFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-DW--- 281 (470)
Q Consensus 211 ~~~Le~~l~~~---~~~~~~vi-~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~-~~-~~--- 281 (470)
.++||+++.+. +.+++.++ ++| +||-|+++ +++.+..+.++|.++++.+|+||+|+|-.+....| .+ +.
T Consensus 210 v~alE~A~~~A~~~~~kVkGvlitNP-sNPLG~~~-~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~ 287 (471)
T KOG0256|consen 210 VEALEAALNQARKLGLKVKGVLITNP-SNPLGTTL-SPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKD 287 (471)
T ss_pred HHHHHHHHHHHHHhCCceeEEEEeCC-CCCCCCcc-CHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhc
Confidence 88898888653 45788777 566 99999999 99999999999999999999999999722222222 11 11
Q ss_pred CCCCcce----eecccccc-CCCcceeEEEe-cHHHHhhcCcCCccCCCC-CCHHHHHHHHHHHHH--Hhh---hhHHHH
Q 012138 282 EEVRPDM----VILGKALG-GGVIPVSAVLA-DKEVMLCIQPGEHGSTFG-GNPLASAVAIASLDV--IRD---EKLAER 349 (470)
Q Consensus 282 ~~~~pdi----~s~sK~l~-gG~~~ig~v~~-~~~~~~~~~~~~~~~t~~-~~~~~~aaa~a~l~~--~~~---~~~~~~ 349 (470)
....+|. .++||-+| +|+ |+|+|.. ++++....+.. +.|+ .++..+..+..-|.. +.+ .+..++
T Consensus 288 ~~~~~~rvHivyslSKD~GlpGf-RvGviYS~ne~VvsaA~km---ssf~~vSs~tQ~~la~LLSD~~f~~~yl~en~~R 363 (471)
T KOG0256|consen 288 PHLDPDRVHIVYSLSKDFGLPGF-RVGVIYSNNEDVVSAATKM---SSFGLVSSQTQYLLASLLSDEEFTREYLRENNKR 363 (471)
T ss_pred cccCCCcEEEEEEeccccCCCce-EEEEEEecChHHHHHHHHH---hhccCCcHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 1124453 39999999 998 9999994 66666655432 2222 455555544443432 222 223445
Q ss_pred HHHHHHHHHHHHHHHHhhCCCceEEE-eccceeEEEEecc---CCCchhHHHHHHHHHHc-CceeccCC------CCEEE
Q 012138 350 SAHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDK---TALPVSAYDICLKMKER-GILAKPTH------DTIVR 418 (470)
Q Consensus 350 ~~~~~~~l~~~L~~l~~~~p~~~~~~-~~~g~~~~~~~~~---~~~~~~~~~~~~~l~~~-Gv~~~~~~------~~~iR 418 (470)
++....++.++|++++ +... .+.|+|+++.+.. ..+...-.++.+++.++ ++.++||. ++++|
T Consensus 364 l~~rh~~~~~gLk~lg------I~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFR 437 (471)
T KOG0256|consen 364 LRIRHRYIVEGLKALG------IPCLKSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCHCHEPGWFR 437 (471)
T ss_pred HHHHHHHHHhhHHhcC------CceeecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcceecCCCeEE
Confidence 5566667777777752 4343 5567777766532 11123345677888888 99999984 89999
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHh
Q 012138 419 LTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 419 ~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
+++. .+.++.++-++++|+.++.
T Consensus 438 vcFA-n~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 438 VCFA-NMSEETLEVAMRRLKQFLD 460 (471)
T ss_pred EEec-cCCHHHHHHHHHHHHHHHH
Confidence 9953 4555555659999999987
No 255
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.85 E-value=7.2e-19 Score=166.16 Aligned_cols=285 Identities=15% Similarity=0.162 Sum_probs=195.0
Q ss_pred eEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCC----
Q 012138 134 MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG---- 209 (470)
Q Consensus 134 ~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 209 (470)
.+++|+|.+.+++.+++++.. .|+ .|++...+|.+.......++ ..++.++.+
T Consensus 126 diiit~G~t~~l~~~l~~~~N---------~gd-~vlie~~ty~~AL~s~~a~g-------------v~~ipv~md~~Gi 182 (472)
T KOG0634|consen 126 DIIITNGNTDGLFKVLRTLIN---------RGD-HVLIEEYTYPSALQSMEALG-------------VKIIPVKMDQDGI 182 (472)
T ss_pred eEEEecCCchHHHHHHHHhhc---------CCC-ceEEecccchHHHHhccccC-------------ceEEeccccCCCC
Confidence 589999999999999999987 355 78888888854433222211 112233332
Q ss_pred CHHHHHHHHHhcC------CCeEEEEEcc-ccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCccc---CCc---
Q 012138 210 DITALEKIFKESG------DQIAGFLFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS---GRM--- 276 (470)
Q Consensus 210 d~~~Le~~l~~~~------~~~~~vi~ep-i~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~---G~~--- 276 (470)
++|.|++.+..+. .+....++-| .|||||..+ +.+..++|.+||||||+++|.||+|.=+-+. +..
T Consensus 183 ~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tl-s~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~ 261 (472)
T KOG0634|consen 183 DPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTL-SLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELE 261 (472)
T ss_pred CHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCcc-CHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCcccc
Confidence 7999999998763 2366777666 899999999 9999999999999999999999999732222 110
Q ss_pred ---c--------------ccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHH
Q 012138 277 ---L--------------ASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLD 339 (470)
Q Consensus 277 ---~--------------~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~ 339 (470)
+ ..+..|....+-||||-+++|+ |+||+.+++.+++++.......|-+++.+.+....+.|+
T Consensus 262 ~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGl-RlG~it~~~~~l~ril~~ae~~t~~pSg~sq~iv~a~l~ 340 (472)
T KOG0634|consen 262 SPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGL-RLGWITGNSLFLKRILDLAEVATSGPSGFSQGIVYAMLK 340 (472)
T ss_pred CccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcc-eeEEeecCHHHHHHHhhhcceeecCcccccHHHHHHHHH
Confidence 1 1111121222339999999999 999999999888877655555666688888888888888
Q ss_pred HHhhhhHHHHHHHHHHHHHHH----HHHHHhhCCCc-eEEE-eccceeEEEEeccCCC----chh-H-HHHHHHHHHcCc
Q 012138 340 VIRDEKLAERSAHLGEELRQH----LFKIQQQFPNY-VKEV-RGRGLFNAVEFDKTAL----PVS-A-YDICLKMKERGI 407 (470)
Q Consensus 340 ~~~~~~~~~~~~~~~~~l~~~----L~~l~~~~p~~-~~~~-~~~g~~~~~~~~~~~~----~~~-~-~~~~~~l~~~Gv 407 (470)
.+.++++.+.+.+++.....+ |.++...+|.. .... +..|.|++++++.... ..+ . +.+...+.++||
T Consensus 341 ~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV 420 (472)
T KOG0634|consen 341 RWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGV 420 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccccchHHHHHHHHHHHHHCCe
Confidence 877766666665555444333 23333445533 3333 4457777777752111 111 2 334456677899
Q ss_pred eeccCC----------CC-EEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 408 LAKPTH----------DT-IVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 408 ~~~~~~----------~~-~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
.+.+|. .. ++|++.++ .+.|++++++++|..+++ +.
T Consensus 421 ~~v~G~~F~v~p~~s~~kiffRls~a~-a~~e~l~~g~~rf~~~ik-e~ 467 (472)
T KOG0634|consen 421 KLVCGSWFMVDPESSWSKIFFRLSIAF-AEPEKLDEGIERFGSVIK-EH 467 (472)
T ss_pred EEecCceeEEcCccCCCcceEEEEeec-CCHHHHHHHHHHHHHHHH-HH
Confidence 987652 23 89999875 567799999999999998 64
No 256
>PRK14012 cysteine desulfurase; Provisional
Probab=99.85 E-value=6.2e-19 Score=177.41 Aligned_cols=331 Identities=14% Similarity=0.185 Sum_probs=197.0
Q ss_pred CeEEeccCCcccccCCCCCHHHHHHHHHHHH--HccccCCC-C------CCCcHHHHHHHHhhhhCC--CeEEecCChhH
Q 012138 75 NKYLDFLSAYSAVNQGHCHPKIMKALQEQAE--KLTLSSRA-F------YNDKFPVFAERLTSMFGY--DMVLPMNTGAE 143 (470)
Q Consensus 75 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~--~~~~~~~~-~------~~~~~~~l~~~l~~~~~~--~~v~~~~sGte 143 (470)
+.|+|..+. +..++.+.+++.+.+. ........ . ..+..+++++.++++++. +.+++++||++
T Consensus 4 ~iyld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~ 77 (404)
T PRK14012 4 PIYLDYSAT------TPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATE 77 (404)
T ss_pred eEEecCcCC------CCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHH
Confidence 357776544 2367899999988775 21111110 0 013356778889998875 45999999999
Q ss_pred HHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCC
Q 012138 144 GVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGD 223 (470)
Q Consensus 144 A~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~ 223 (470)
|++.+++.+... +. ++|+ .|++....|+........+. .......+.+..++ ..+ |+++|++++++
T Consensus 78 al~~~l~~l~~~-~~----~~gd-~Vi~~~~~~~s~~~~~~~~~-~~g~~~~~v~~~~~-g~~---d~~~l~~~i~~--- 143 (404)
T PRK14012 78 SDNLAIKGAAHF-YQ----KKGK-HIITSKTEHKAVLDTCRQLE-REGFEVTYLDPQSN-GII---DLEKLEAAMRD--- 143 (404)
T ss_pred HHHHHHHHHHHh-hc----CCCC-EEEEecCccHHHHHHHHHHH-hCCCEEEEEccCCC-CcC---CHHHHHHhcCC---
Confidence 999998866431 00 1355 67776666533222111110 00111111111111 112 89999999976
Q ss_pred CeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecc--ccccCCCcc
Q 012138 224 QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGGGVIP 301 (470)
Q Consensus 224 ~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~s--K~l~gG~~~ 301 (470)
++++|++..++|++|.+.| +++|.++|++||+++|+|++|+ +|.. .+... ...+|++++| |.++++ +
T Consensus 144 ~t~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~vivD~a~~-~g~~--~~~~~--~~~~D~~~~s~~K~~gp~--g 212 (404)
T PRK14012 144 DTILVSIMHVNNEIGVIQD----IAAIGEICRERGIIFHVDAAQS-VGKV--PIDLS--KLKVDLMSFSAHKIYGPK--G 212 (404)
T ss_pred CCEEEEEECcCCCccchhh----HHHHHHHHHHcCCEEEEEcchh-cCCc--ccCcc--cCCCCEEEEehhhccCCC--c
Confidence 7888888888999999998 9999999999999999999997 2211 11122 2346887666 966543 6
Q ss_pred eeEEEecHHHHhhcCcCCccC-------CCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCce
Q 012138 302 VSAVLADKEVMLCIQPGEHGS-------TFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYV 372 (470)
Q Consensus 302 ig~v~~~~~~~~~~~~~~~~~-------t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~ 372 (470)
+|+++.+++....+.+...+. ..+.+.....+..++++.++. +...++.+.+.+++.+.|+++ | .+
T Consensus 213 ~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~----~-~i 287 (404)
T PRK14012 213 IGALYVRRKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKDI----E-EV 287 (404)
T ss_pred eEEEEEecCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcC----C-CE
Confidence 788887766443343321111 112344444455466665433 345666777777777777653 2 22
Q ss_pred EEE-----eccceeEEEEeccCCCchhHHHHHHHHHHcCcee----ccC-----------------CCCEEEEecCCCCC
Q 012138 373 KEV-----RGRGLFNAVEFDKTALPVSAYDICLKMKERGILA----KPT-----------------HDTIVRLTPPLSIS 426 (470)
Q Consensus 373 ~~~-----~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~----~~~-----------------~~~~iR~~~~~~~t 426 (470)
... +..+.+. +.+... +..++...|.+.+|.. .+. ..+.+|++++..+|
T Consensus 288 ~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~l~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t 362 (404)
T PRK14012 288 YLNGDLEQRVPGNLN-VSFNYV----EGESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTT 362 (404)
T ss_pred EEeCCccccCCCEEE-EEEeCc----CHHHHHHhCCCeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCC
Confidence 211 1111211 212211 2345666664323221 111 14789999999999
Q ss_pred HHHHHHHHHHHHHHHhcccCC
Q 012138 427 SNELQEGSKALHDVLELDLPK 447 (470)
Q Consensus 427 ~e~i~~~~~~l~~~l~~~~~~ 447 (470)
++|++++++.|+++++ +++.
T Consensus 363 ~~dvd~~~~~l~~~~~-~~~~ 382 (404)
T PRK14012 363 EEEIDYAIELVRKSIG-KLRE 382 (404)
T ss_pred HHHHHHHHHHHHHHHH-HHHh
Confidence 9999999999999998 7754
No 257
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.85 E-value=1.3e-18 Score=175.82 Aligned_cols=331 Identities=15% Similarity=0.161 Sum_probs=196.0
Q ss_pred CeEEeccCCcccccCCCCCHHHHHHHHHHHH-HccccCC--CC--CCCcHHHHHH----HHhhhhCCCeE-EecCChhHH
Q 012138 75 NKYLDFLSAYSAVNQGHCHPKIMKALQEQAE-KLTLSSR--AF--YNDKFPVFAE----RLTSMFGYDMV-LPMNTGAEG 144 (470)
Q Consensus 75 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~-~~~~~~~--~~--~~~~~~~l~~----~l~~~~~~~~v-~~~~sGteA 144 (470)
+.+|++.++-.. .+|+|.+++.+.+. .+...+. .+ ..+....+++ ++++++|.+.. ++++||++|
T Consensus 25 ~~~~~l~~~~n~-----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~i~~~sgt~a 99 (416)
T PRK00011 25 EEHIELIASENF-----VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYANVQPHSGSQA 99 (416)
T ss_pred hcCeeeecccCc-----CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceeeecCCchHH
Confidence 345666665322 47999999877653 2221111 11 1122344444 77888886643 444678999
Q ss_pred HHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccc--hhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcC
Q 012138 145 VETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLA--AISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG 222 (470)
Q Consensus 145 ~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~ 222 (470)
+..++..+.. +|+ .|++..++|.+.... ...... ......+.+..++...+ |++++++++++.
T Consensus 100 l~~~l~~l~~---------~gd-~Vl~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~---d~~~l~~~i~~~- 164 (416)
T PRK00011 100 NAAVYFALLK---------PGD-TILGMDLAHGGHLTHGSPVNFSG-KLYNVVSYGVDEETGLI---DYDEVEKLALEH- 164 (416)
T ss_pred HHHHHHHhcC---------CCC-EEEEeccccCCcccccccccccc-ceeeEeecCcCcccCCc---CHHHHHHHHHhc-
Confidence 9998887643 465 777877776433211 111111 01111111111111122 899999999753
Q ss_pred CCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-CCcccCCccccccCCCCccee--eccccccCCC
Q 012138 223 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDMV--ILGKALGGGV 299 (470)
Q Consensus 223 ~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g~g~~G~~~~~~~~~~~pdi~--s~sK~l~gG~ 299 (470)
++++|++.. +..|...| +++|.++|++||+++|+|++|. |+...|... . ..+ ..|++ +++|+++ |.
T Consensus 165 -~~k~v~~~~--~~~~~~~~----~~~I~~la~~~~~~livD~a~~~g~~~~g~~~-~-~~~-~~di~~~S~~K~l~-g~ 233 (416)
T PRK00011 165 -KPKLIIAGA--SAYSRPID----FKRFREIADEVGAYLMVDMAHIAGLVAAGVHP-S-PVP-HADVVTTTTHKTLR-GP 233 (416)
T ss_pred -CCCEEEECC--CcCCCccC----HHHHHHHHHHcCCEEEEECcchhcccccCccC-C-CCC-CCcEEEecCCcCCC-CC
Confidence 577777643 23455666 9999999999999999999986 432222111 0 111 23554 7889884 45
Q ss_pred cceeEEEec-HHHHhhcCcCCccCCCC-CCHHHHHHHHHHH-HHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEE
Q 012138 300 IPVSAVLAD-KEVMLCIQPGEHGSTFG-GNPLASAVAIASL-DVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKE 374 (470)
Q Consensus 300 ~~ig~v~~~-~~~~~~~~~~~~~~t~~-~~~~~~aaa~a~l-~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~ 374 (470)
+.|+++++ +++.+.++.......++ .....++++..++ +.+++ +++.++.+++++++++.|++++ +..
T Consensus 234 -~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g------~~~ 306 (416)
T PRK00011 234 -RGGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERG------FRV 306 (416)
T ss_pred -CceEEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCC------Cee
Confidence 88899985 68887775433222232 2233333333333 33322 4577888888899999888752 221
Q ss_pred Ee--ccceeEEEEeccCCCchhHHHHHHHHHHcCceeccC----------CCCEEEEecC----CCCCHHHHHHHHHHHH
Q 012138 375 VR--GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----------HDTIVRLTPP----LSISSNELQEGSKALH 438 (470)
Q Consensus 375 ~~--~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----------~~~~iR~~~~----~~~t~e~i~~~~~~l~ 438 (470)
.. ..+.++++.+.... .+..++.+.|.++||.+... .+..+|++.. ..+|++|++++++.|+
T Consensus 307 ~~~~~~~~~~~i~~~~~~--~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~ 384 (416)
T PRK00011 307 VSGGTDNHLVLVDLRSKG--LTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIA 384 (416)
T ss_pred eecCCCCeEEEEeCcccC--CCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHH
Confidence 11 23455566554221 24677889999999998631 1456898542 2568999999999999
Q ss_pred HHHhcccC
Q 012138 439 DVLELDLP 446 (470)
Q Consensus 439 ~~l~~~~~ 446 (470)
+++. ..+
T Consensus 385 ~~~~-~~~ 391 (416)
T PRK00011 385 DVLD-NPD 391 (416)
T ss_pred HHHh-ccC
Confidence 9988 533
No 258
>PLN02651 cysteine desulfurase
Probab=99.84 E-value=2.1e-19 Score=178.38 Aligned_cols=305 Identities=15% Similarity=0.134 Sum_probs=192.9
Q ss_pred CCHHHHHHHHHHHHHccccCCC--C-----CCCcHHHHHHHHhhhhCC--CeEEecCChhHHHHHHHHHHHHhchhcccC
Q 012138 92 CHPKIMKALQEQAEKLTLSSRA--F-----YNDKFPVFAERLTSMFGY--DMVLPMNTGAEGVETALKLARKWGYVKKKF 162 (470)
Q Consensus 92 ~~p~v~~a~~~~~~~~~~~~~~--~-----~~~~~~~l~~~l~~~~~~--~~v~~~~sGteA~~~al~~~~~~~~~~~~~ 162 (470)
.++++.+++.+.+......+.. . ..+..+++.+.++++++. +.++|++|++++++.++..+..+. ..
T Consensus 11 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~-~~--- 86 (364)
T PLN02651 11 IDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFY-KD--- 86 (364)
T ss_pred CCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhc-cC---
Confidence 6789999998887543221111 0 123356777888888874 479999999999999988765421 11
Q ss_pred CCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccC
Q 012138 163 SIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIP 242 (470)
Q Consensus 163 ~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~ 242 (470)
+|+ .|++....|+. .......-........+.+...+ ..+ |++++++++++ +++++++..++|++|.+.|
T Consensus 87 -~g~-~vl~~~~~h~s-~~~~~~~~~~~g~~v~~v~~~~~-~~~---d~~~l~~~i~~---~t~lv~v~~~~n~tG~~~~ 156 (364)
T PLN02651 87 -KKK-HVITTQTEHKC-VLDSCRHLQQEGFEVTYLPVKSD-GLV---DLDELAAAIRP---DTALVSVMAVNNEIGVIQP 156 (364)
T ss_pred -CCC-EEEEcccccHH-HHHHHHHHHhcCCEEEEEccCCC-CcC---CHHHHHHhcCC---CcEEEEEECCCCCceeccc
Confidence 344 66665555332 21111100000111001111110 111 78999999976 7888888888999999998
Q ss_pred ChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecc--ccccCCCcceeEEEecHHHHhhcCcCCc
Q 012138 243 PDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEH 320 (470)
Q Consensus 243 ~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~s--K~l~gG~~~ig~v~~~~~~~~~~~~~~~ 320 (470)
+++|.++|++||+++++|.+|+ +|. ..+..+.++ +|++++| | +.|+. .+|+++.+++....+.+...
T Consensus 157 ----l~~I~~~~~~~g~~~~vD~a~~-~g~--~~~~~~~~~--~D~~~~s~hK-~~gp~-G~g~l~v~~~~~~~l~p~~~ 225 (364)
T PLN02651 157 ----VEEIGELCREKKVLFHTDAAQA-VGK--IPVDVDDLG--VDLMSISGHK-IYGPK-GVGALYVRRRPRVRLEPLMS 225 (364)
T ss_pred ----HHHHHHHHHHcCCEEEEEcchh-hCC--cccCcccCC--CCEEEechhh-hCCCC-ceEEEEEcCCCCCCCCcccc
Confidence 9999999999999999999998 211 112233344 5877665 8 44444 78999998877766654322
Q ss_pred c-------CCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEe------ccceeEEEE
Q 012138 321 G-------STFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR------GRGLFNAVE 385 (470)
Q Consensus 321 ~-------~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~------~~g~~~~~~ 385 (470)
+ ...+.|..++.++.++|+.+.+ +.+.++.+++.+++.+.|.+. .| .+.... ....++.+.
T Consensus 226 g~~~~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~---~~-~~~i~~~~~~~~~~~~i~~~~ 301 (364)
T PLN02651 226 GGGQERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRAK---LG-GVRVNGPRDPEKRYPGTLNLS 301 (364)
T ss_pred CCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhh---CC-CEEEECCCCcccCcCCEEEEE
Confidence 1 1224677788888888888764 446667777777777777542 11 122211 123456665
Q ss_pred eccCCCchhHHHHHHHHHHcCceeccCC-----------------------CCEEEEecCCCCCHHHHH
Q 012138 386 FDKTALPVSAYDICLKMKERGILAKPTH-----------------------DTIVRLTPPLSISSNELQ 431 (470)
Q Consensus 386 ~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-----------------------~~~iR~~~~~~~t~e~i~ 431 (470)
+.. .++.++.+.|.+ |.+..+. .+.+|++++..+|++|||
T Consensus 302 ~~~----~~~~~~~~~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 302 FAY----VEGESLLMGLKE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred eCC----CCHHHHHHHhCC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 542 367788888865 6654321 368999999999999985
No 259
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.84 E-value=1.8e-19 Score=180.11 Aligned_cols=287 Identities=16% Similarity=0.174 Sum_probs=188.5
Q ss_pred CCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchh----ccc
Q 012138 112 RAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAI----SMS 187 (470)
Q Consensus 112 ~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~----~~~ 187 (470)
..+.++...+|++.++++.+.+.+++++||++|+..++..+.. +|+ .|++..+.|. .+.... ...
T Consensus 59 ~r~~~p~~~~Le~~iA~~~g~~~~l~~~sG~~Ai~~al~~ll~---------~Gd-~Vl~~~~~y~-~~~~~~~~~~~~~ 127 (400)
T PRK06234 59 SRLGNPTSTEVENKLALLEGGEAAVVAASGMGAISSSLWSALK---------AGD-HVVASDTLYG-CTFALLNHGLTRY 127 (400)
T ss_pred cCCCCccHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHhC---------CCC-EEEEecCccc-hHHHHHHHHHhhC
Confidence 3345677899999999999988999999999999988876654 566 6777777653 333221 111
Q ss_pred CCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhc--CcEEEEec
Q 012138 188 CDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY--NILMIADE 265 (470)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~--gillI~De 265 (470)
+ ..+..++..|++++++++++ ++++|++|.++||+|.+.+ +++|.++|++| |+++|+||
T Consensus 128 G------------~~v~~vd~~d~e~l~~~i~~---~tklI~iesP~NPtG~v~d----l~~I~~la~~~~~~i~livDe 188 (400)
T PRK06234 128 G------------VEVTFVDTSNLEEVRNALKA---NTKVVYLETPANPTLKVTD----IKAISNIAHENNKECLVFVDN 188 (400)
T ss_pred C------------eEEEEECCCCHHHHHHHhcc---CCeEEEEECCCCCCCCcCC----HHHHHHHHHhcCCCCEEEEEC
Confidence 1 11345556689999999976 7899998888999999998 99999999997 99999999
Q ss_pred cccCCcccCCccccccCCCCccee--eccccccC-CCcceeEEEecHHHHhhcCcCC-c-cCCCCCCHHHHHHHHHHHHH
Q 012138 266 IQSGLARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLADKEVMLCIQPGE-H-GSTFGGNPLASAVAIASLDV 340 (470)
Q Consensus 266 v~~g~g~~G~~~~~~~~~~~pdi~--s~sK~l~g-G~~~ig~v~~~~~~~~~~~~~~-~-~~t~~~~~~~~aaa~a~l~~ 340 (470)
+|+... .+... +...|++ +++|.++| |....|++++++++++.++... . ..+...+|..++.+...|+.
T Consensus 189 a~~~~~-~~~~l-----~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~t 262 (400)
T PRK06234 189 TFCTPY-IQRPL-----QLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKT 262 (400)
T ss_pred CCCchh-cCCch-----hhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc
Confidence 997321 12111 1123554 78899985 6513488999998888775321 1 12345778888777766654
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHh----hCCCce---------EEEeccceeEEEEeccCCCchhHHHHHHHHHHcCc
Q 012138 341 IRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGI 407 (470)
Q Consensus 341 ~~~~~~~~~~~~~~~~l~~~L~~l~~----~~p~~~---------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv 407 (470)
+. ...++..++..++.+.|++... .||... ....+.|.++.+++.... ....+|.+.|.--++
T Consensus 263 l~--~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~--~~~~~f~~~l~~~~~ 338 (400)
T PRK06234 263 LQ--IRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGV--EEGKVVMNNVKLATL 338 (400)
T ss_pred HH--HHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcH--HHHHHHHHhCCcceE
Confidence 43 3445555666666666654221 122110 011356888888886321 245677777754443
Q ss_pred eec----------cC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 408 LAK----------PT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 408 ~~~----------~~-----------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
..+ |. .++.+||++.+ |+.+++++-|.++|+
T Consensus 339 ~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl----E~~~dl~~dl~~al~ 396 (400)
T PRK06234 339 AVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGL----EDVDDIIADLKQALD 396 (400)
T ss_pred eccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHHH
Confidence 322 11 14789999655 556667777776665
No 260
>PRK07049 methionine gamma-lyase; Validated
Probab=99.84 E-value=2e-19 Score=180.71 Aligned_cols=293 Identities=13% Similarity=0.149 Sum_probs=188.4
Q ss_pred CCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchh---cccC
Q 012138 112 RAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAI---SMSC 188 (470)
Q Consensus 112 ~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~---~~~~ 188 (470)
..+.++....|++.|+++.+.+.+++++||++|+..++..+.. +|+ .|++..+.|.+...... ...+
T Consensus 78 ~R~~~Pt~~~Le~~lA~leg~~~~iv~~sG~~Ai~~~l~al~~---------~Gd-~Vv~~~p~Y~~~~~~~~~~l~~~G 147 (427)
T PRK07049 78 SRFNHPNSEIVEDRLAVYEGAESAALFSSGMSAIATTLLAFVR---------PGD-VILHSQPLYGGTETLLAKTFRNFG 147 (427)
T ss_pred cCCCCcCHHHHHHHHHHHhCCCcEEEEccHHHHHHHHHHHHhC---------CCC-EEEEcCCCcccHHHHHHHHHHhcC
Confidence 3456777899999999999999999999999999999887765 566 77888889876533211 1111
Q ss_pred CcccccCCCCCCCCeeeec-CCCHHHHHHHHHhc--CCCeEEEEEccccCCCccccCChhhHHHHHHHHHh---cCcEEE
Q 012138 189 DNEAIRGFGPLLPGHLKVD-FGDITALEKIFKES--GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK---YNILMI 262 (470)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~-~~d~~~Le~~l~~~--~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~---~gillI 262 (470)
.. .+.++ ..|++++++.+.+. ..++++|+++.++||+|.+++ .+.+.+|.+.|++ +++++|
T Consensus 148 i~------------~v~~~~~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d-~~~l~~la~~~~~~~~~~~~vv 214 (427)
T PRK07049 148 VG------------AVGFADGLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVD-VAAVRRVADAIEARQGHRPIIA 214 (427)
T ss_pred cE------------EEEEeCCCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccC-HHHHHHHHHHhhhcccCCCEEE
Confidence 11 11222 23788888877532 136889998888999999995 4444444444322 799999
Q ss_pred EeccccCCcccCCccccccCCCCccee--ecccccc--CCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHH
Q 012138 263 ADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALG--GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASL 338 (470)
Q Consensus 263 ~Dev~~g~g~~G~~~~~~~~~~~pdi~--s~sK~l~--gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l 338 (470)
+||++.++..... .+ ++ .|++ |+||.++ +|+ ++|++++++++++.+.........+.++..+.++...|
T Consensus 215 vDety~~~~~~~p---l~-~g--~divv~S~SK~~gG~~gl-r~G~vv~~~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L 287 (427)
T PRK07049 215 CDNTLLGPVFQKP---LE-HG--ADLSVYSLTKYVGGHSDL-VAGAVLGRKALIRQVRALRSAIGTQLDPHSCWMLGRSL 287 (427)
T ss_pred EECCccccccCCc---cc-cC--CCEEEEcCceeecCCCCc-EEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCC
Confidence 9999864321111 11 22 3544 9999999 588 99999999998887765433334457888888877777
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHh----hCCCce-----------EEEeccceeEEEEeccCCCchhHHHHHHHHH
Q 012138 339 DVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYV-----------KEVRGRGLFNAVEFDKTALPVSAYDICLKMK 403 (470)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~l~~~L~~l~~----~~p~~~-----------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~ 403 (470)
+.+.. ..++..+++..+.+.|++... .||+.. ....+.|.++.+++..+. ..+.+|++.|.
T Consensus 288 ~tl~~--R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~~~--~~~~~f~~~l~ 363 (427)
T PRK07049 288 ETLVL--RMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKGGQ--AAAFRFLNALQ 363 (427)
T ss_pred ChHHH--HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcCCH--HHHHHHHHcCc
Confidence 65432 344456666677777765421 223111 112356889999886421 24556666554
Q ss_pred Hc--Cceec--------cC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 404 ER--GILAK--------PT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 404 ~~--Gv~~~--------~~-----------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
-- ++... |. .++.|||++.+ |+.+++++-|.++|+
T Consensus 364 l~~~~~slG~~~sli~~~~~~~h~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 425 (427)
T PRK07049 364 IFKLAVSLGGTESLASHPASMTHSGVPADVRERIGVLESTIRLSIGI----EHPDDLIADLAQALD 425 (427)
T ss_pred ccEEcccCCCCCceeeCCCccccccCCHHHHHhcCCCcCeEEEEeCc----CCHHHHHHHHHHHHh
Confidence 21 21111 11 14689999554 677888888888776
No 261
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.84 E-value=3.6e-19 Score=176.05 Aligned_cols=299 Identities=17% Similarity=0.225 Sum_probs=190.2
Q ss_pred HHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCcc
Q 012138 98 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFH 177 (470)
Q Consensus 98 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yh 177 (470)
+++.+.++...+ ...+...++++.++++++.+++++++||++|++.+++.+.. .+|+ .|++..++|+
T Consensus 3 ~~~~~~~~~~~~----~~~~~~~~~~~~la~~~~~~~~~~~~sgt~al~~~l~~l~~--------~~gd-~vl~~~~~~~ 69 (352)
T cd00616 3 EAVEEVLDSGWL----TLGPKVREFEKAFAEYLGVKYAVAVSSGTAALHLALRALGI--------GPGD-EVIVPSFTFV 69 (352)
T ss_pred HHHHHHHHcCCc----cCCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCC--------CCCC-EEEeCCcchH
Confidence 445555554333 23456789999999999988999999999999999987631 0454 7888888877
Q ss_pred ccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhc
Q 012138 178 GRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY 257 (470)
Q Consensus 178 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~ 257 (470)
+........+.... +.+..++...+ |++++++++++ ++++|++. +++|.+.| +++|.++|++|
T Consensus 70 ~~~~~~~~~g~~~~----~~~~~~~~~~~---d~~~l~~~i~~---~~~~v~~~---~~~G~~~~----~~~i~~l~~~~ 132 (352)
T cd00616 70 ATANAILLLGATPV----FVDIDPDTYNI---DPELIEAAITP---RTKAIIPV---HLYGNPAD----MDAIMAIAKRH 132 (352)
T ss_pred HHHHHHHHcCCeEE----EEecCCCcCCc---CHHHHHHhcCc---CCeEEEEE---CCCCCcCC----HHHHHHHHHHc
Confidence 55433322221111 11111111112 78999988864 78888864 36888887 99999999999
Q ss_pred CcEEEEecccc-CCcccCCccccccCCCCcceeecc----ccccCCCcceeEEEec-HHHHhhcCcCC------------
Q 012138 258 NILMIADEIQS-GLARSGRMLASDWEEVRPDMVILG----KALGGGVIPVSAVLAD-KEVMLCIQPGE------------ 319 (470)
Q Consensus 258 gillI~Dev~~-g~g~~G~~~~~~~~~~~pdi~s~s----K~l~gG~~~ig~v~~~-~~~~~~~~~~~------------ 319 (470)
|+++|+|++|+ |....+. ..+...|+.++| |.+++| ..|+++.+ +++.+.++...
T Consensus 133 ~i~li~D~a~~~g~~~~~~-----~~~~~~d~~~~S~~~~K~~~~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (352)
T cd00616 133 GLPVIEDAAQALGATYKGR-----KVGTFGDAGAFSFHPTKNLTTG--EGGAVVTNDEELAERARLLRNHGRDRDRFKYE 205 (352)
T ss_pred CCeEEEECCCCCCCeECCE-----EcccCcceeEEcCCCCCCCccc--CceEEEECCHHHHHHHHHHHHcCCCCCCCccc
Confidence 99999999998 3211221 112223555444 988654 55667664 56665543210
Q ss_pred ---ccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEE---eccceeEEEEeccCCCch
Q 012138 320 ---HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEV---RGRGLFNAVEFDKTALPV 393 (470)
Q Consensus 320 ---~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~---~~~g~~~~~~~~~~~~~~ 393 (470)
.+.++..+++.++.+...++.+ +.+.++.+++.+++++.|.++..- ..+... .....++.+.+... .+.
T Consensus 206 ~~~~~~~~~~~~~~aa~~~~~l~~~--~~~~~~~~~~~~~~~~~L~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~-~~~ 280 (352)
T cd00616 206 HEILGYNYRLSEIQAAIGLAQLEKL--DEIIARRREIAERYKELLADLPGI--RLPDVPPGVKHSYHLYVIRLDPE-AGE 280 (352)
T ss_pred cceeeeccCcCHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHhcCCCCc--cCCCCCCCCceeeEEEEEEECCc-CCC
Confidence 1123346677777776665544 446677788888888888764210 011111 11234555545421 013
Q ss_pred hHHHHHHHHHHcCceec----cCC-----------------------CCEEEEecCCCCCHHHHHHHHHHHH
Q 012138 394 SAYDICLKMKERGILAK----PTH-----------------------DTIVRLTPPLSISSNELQEGSKALH 438 (470)
Q Consensus 394 ~~~~~~~~l~~~Gv~~~----~~~-----------------------~~~iR~~~~~~~t~e~i~~~~~~l~ 438 (470)
+..++.+.|.++||.+. |.. .+.+|+++....|++||++++++|+
T Consensus 281 ~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 281 SRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred CHHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 68899999999999764 110 2689999999999999999999874
No 262
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.84 E-value=2.6e-19 Score=177.20 Aligned_cols=284 Identities=14% Similarity=0.158 Sum_probs=185.0
Q ss_pred CCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcc
Q 012138 112 RAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 191 (470)
Q Consensus 112 ~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~ 191 (470)
..+.++...+|++.++++.|.+..++++||++|+..++. +.. +|+ .||+..+.|++...........
T Consensus 47 ~r~~~pt~~~le~~la~l~g~~~~~~~~sG~~ai~~~~~-ll~---------~Gd-~Vl~~~~~y~~t~~~~~~~~~~-- 113 (366)
T PRK08247 47 SRTGNPTRGVLEQAIADLEGGDQGFACSSGMAAIQLVMS-LFR---------SGD-ELIVSSDLYGGTYRLFEEHWKK-- 113 (366)
T ss_pred cCCCCchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHH-HhC---------CCC-EEEEecCCcCcHHHHHHHHhhc--
Confidence 345677889999999999998888999999999987764 332 455 7888888887642211110000
Q ss_pred cccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-CC
Q 012138 192 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GL 270 (470)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g~ 270 (470)
....+..++..|++++++++++ ++++|++|.++||+|.+.+ +++|.++|++||+++|+||+|. ++
T Consensus 114 -------~G~~v~~vd~~d~~~l~~~i~~---~tklv~le~P~NP~~~~~d----l~~I~~la~~~g~~lIvD~t~~~~~ 179 (366)
T PRK08247 114 -------WNVRFVYVNTASLKAIEQAITP---NTKAIFIETPTNPLMQETD----IAAIAKIAKKHGLLLIVDNTFYTPV 179 (366)
T ss_pred -------cCceEEEECCCCHHHHHHhccc---CceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCCcccc
Confidence 0012345555689999999876 7899998877999987776 9999999999999999999985 22
Q ss_pred cccCCccccccCCCCcceeeccccccC--CCcceeEEEec-HHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHH
Q 012138 271 ARSGRMLASDWEEVRPDMVILGKALGG--GVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLA 347 (470)
Q Consensus 271 g~~G~~~~~~~~~~~pdi~s~sK~l~g--G~~~ig~v~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~ 347 (470)
. .... + .+.+.-+.+++|.++| +. ..|+++++ +++.+.+.......+...+++.+..+...|+.+. ...
T Consensus 180 ~--~~p~--~-~g~di~i~S~sK~~~g~~d~-~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~tl~--~r~ 251 (366)
T PRK08247 180 L--QRPL--E-EGADIVIHSATKYLGGHNDV-LAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRGMKTLA--LRM 251 (366)
T ss_pred c--cCch--h-cCCcEEEeecceeccCCCce-eeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHhccCcHH--HHH
Confidence 1 1111 1 2222233488999985 45 77888876 6777766543333344567777777766665443 234
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCceEE--EeccceeEEEEeccCCCchhHHHHHHHHH----------HcCceeccC---
Q 012138 348 ERSAHLGEELRQHLFKIQQQFPNYVKE--VRGRGLFNAVEFDKTALPVSAYDICLKMK----------ERGILAKPT--- 412 (470)
Q Consensus 348 ~~~~~~~~~l~~~L~~l~~~~p~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~l~----------~~Gv~~~~~--- 412 (470)
++.++++..+.+.|++. | .+.. .++.|.++.|+++.. ....+|.+.+. .+.+++.|+
T Consensus 252 ~~~~~~a~~l~~~L~~~----p-~v~~v~~P~~gg~~sf~~~~~---~~~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~ 323 (366)
T PRK08247 252 RQHEENAKAIAAFLNEQ----P-GVTDVLYPGRGGMLSFRLQDE---EWVNPFLKSLKLITFAESLGGVESFITYPATQT 323 (366)
T ss_pred HHHHHHHHHHHHHHHhC----C-CeeEEecCCcCcEEEEEECCH---HHHHHHHHcCCcceEccCCCCCceEEECCcccc
Confidence 45566777777776653 3 3332 344788999987531 12334444332 112333332
Q ss_pred --------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 413 --------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 413 --------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
.++.+||+..+ |+++++++-|.++|+
T Consensus 324 ~~~~~~~~r~~~gi~~~~~R~svGl----E~~~dl~~dl~~al~ 363 (366)
T PRK08247 324 HADIPEEIRIANGVCNRLLRFSVGI----ENVEDLIADLKQAFK 363 (366)
T ss_pred cccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHh
Confidence 14689999544 667788888888776
No 263
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=2.7e-19 Score=178.28 Aligned_cols=286 Identities=14% Similarity=0.154 Sum_probs=189.6
Q ss_pred CCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccch---hcccCC
Q 012138 113 AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAA---ISMSCD 189 (470)
Q Consensus 113 ~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~---~~~~~~ 189 (470)
.+.++...+++++++++.|.+.+++++||++|+..++..+.. +|+ .||+..++|++..... +...+
T Consensus 60 r~~~p~~~~le~~lA~l~g~~~~i~~ssG~~Ai~~~l~all~---------~GD-~Vi~~~~~y~~~~~~~~~~~~~~G- 128 (398)
T PRK08249 60 RNTNPTVQAFEEKVRILEGAEAATAFSTGMAAISNTLYTFLK---------PGD-RVVSIKDTYGGTNKIFTEFLPRMG- 128 (398)
T ss_pred CCCChHHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcC---------CCC-EEEEcCCchHHHHHHHHHHHhhCC-
Confidence 355777899999999999999999999999999999886654 465 7888888876532111 11111
Q ss_pred cccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccC
Q 012138 190 NEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 269 (470)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g 269 (470)
..+..++..|++++++++++ ++++|++|.++||+|.+.+ +++|.++|++||+++|+|++|+.
T Consensus 129 -----------i~v~~vd~~d~e~l~~~i~~---~tklV~ie~p~NPtg~v~d----l~~I~~la~~~gi~livD~t~a~ 190 (398)
T PRK08249 129 -----------VDVTLCETGDHEQIEAEIAK---GCDLLYLETPTNPTLKIVD----IERLAAAAKKVGALVVVDNTFAT 190 (398)
T ss_pred -----------eEEEEcCCCCHHHHHHhcCC---CCeEEEEECCCCCCCccCC----HHHHHHHHHHcCCEEEEECCcCc
Confidence 11233444589999999976 7899998888999999998 99999999999999999999983
Q ss_pred CcccCCccccccCCCCccee--eccccccC-CCcce-eEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhh
Q 012138 270 LARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPV-SAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 345 (470)
Q Consensus 270 ~g~~G~~~~~~~~~~~pdi~--s~sK~l~g-G~~~i-g~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~ 345 (470)
+. .... .....|++ +++|.++| |- ++ |++++++++++.++..........++..++.+...++.+..
T Consensus 191 ~~-~~~~-----l~~~~Divv~S~sK~l~g~~~-~~gG~vv~~~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~tL~~-- 261 (398)
T PRK08249 191 PI-NQNP-----LALGADLVIHSATKFLSGHAD-ALGGVVCGSKELMEQVYHYREINGATMDPMSAYLILRGMKTLKL-- 261 (398)
T ss_pred cc-cCCc-----hhhCCCEEeccCceecCCCCC-ceEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhCcchHHH--
Confidence 31 1111 11223544 78899985 43 44 66778888888776444434456788888888777776632
Q ss_pred HHHHHHHHHHHHHHHHHHHHh----hCCCce---------EEEeccceeEEEEeccCCCchhHHHHHHHHHH--cCceec
Q 012138 346 LAERSAHLGEELRQHLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKE--RGILAK 410 (470)
Q Consensus 346 ~~~~~~~~~~~l~~~L~~l~~----~~p~~~---------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~--~Gv~~~ 410 (470)
..++..+++..+.+.|++... .||... ....+.|.++.+++.... ....+|++.|.- .++...
T Consensus 262 R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~~--~~~~~f~~~l~l~~~~~s~G 339 (398)
T PRK08249 262 RVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGGM--DTVKRLLPKLRYAHRAANLG 339 (398)
T ss_pred HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCCH--HHHHHHHHhCCcceEccCCC
Confidence 445556666777777765321 223111 112356889999886321 235566665532 222111
Q ss_pred --------cC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 411 --------PT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 411 --------~~-----------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
|. .++.+||++.+ |+.+++++-|.++|+
T Consensus 340 ~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 392 (398)
T PRK08249 340 AVETIYGPARTTSHVENTLEERAALGIPEGLVRISVGI----EDTEDLIADLEQAFA 392 (398)
T ss_pred CCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHH
Confidence 11 14789999554 566777777777766
No 264
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.84 E-value=4.1e-19 Score=175.10 Aligned_cols=285 Identities=17% Similarity=0.126 Sum_probs=174.3
Q ss_pred CCcHHHHHHHHhhhhCCC----eEEecCChhHHHHHHHHHHHHhchh---cccCCCCCcEEEEEccCccccccchhcccC
Q 012138 116 NDKFPVFAERLTSMFGYD----MVLPMNTGAEGVETALKLARKWGYV---KKKFSIDEAIIVSCCGCFHGRTLAAISMSC 188 (470)
Q Consensus 116 ~~~~~~l~~~l~~~~~~~----~v~~~~sGteA~~~al~~~~~~~~~---~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~ 188 (470)
.++.+++++++++++|.+ .++||+||++|+..++++++..... ..+.+++++.+|+.....|.....+....+
T Consensus 37 ~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g 116 (345)
T cd06450 37 TEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLD 116 (345)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHHh
Confidence 345667777888887764 6999999999999999987642100 000112233344444444655433333222
Q ss_pred CcccccCCCCCCCCeeeecCCCHHHHHHHHHh---cCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEec
Q 012138 189 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 265 (470)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~---~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~De 265 (470)
.... +.+..++. .+ |+++|++++++ .+.++++|++...+|++|.+.| +++|.++|++||+++++|+
T Consensus 117 ~~~~---~v~~~~~~-~~---d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~----~~~i~~~~~~~~~~l~vD~ 185 (345)
T cd06450 117 VKVR---LVPVDEDG-RM---DPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP----LEEIADLAEKYDLWLHVDA 185 (345)
T ss_pred cCeE---EeeeCCCC-Cc---CHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC----HHHHHHHHHHhCCeEEEec
Confidence 1111 11111111 12 89999999975 2225667765555999999987 9999999999999999999
Q ss_pred cccCCcccCCccccccCCC-Cccee--eccccccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHh
Q 012138 266 IQSGLARSGRMLASDWEEV-RPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR 342 (470)
Q Consensus 266 v~~g~g~~G~~~~~~~~~~-~pdi~--s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~ 342 (470)
+|+++............+. ..|.+ +++|.++++. ++|+++.+ ..+..++++.+.
T Consensus 186 a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~-g~g~~~~~----------------------~~~~~~~l~~l~ 242 (345)
T cd06450 186 AYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPL-GCSAVLVR----------------------ALKLWATLRRFG 242 (345)
T ss_pred hhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCc-chHHHHHH----------------------HHHHHHHHHHHh
Confidence 9985432111100000111 23543 6779887776 77877655 333334444444
Q ss_pred h---hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEE-eccceeEEEEeccCC-CchhHHHHHHHHHHcCceeccC----C
Q 012138 343 D---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTA-LPVSAYDICLKMKERGILAKPT----H 413 (470)
Q Consensus 343 ~---~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~-~~~g~~~~~~~~~~~-~~~~~~~~~~~l~~~Gv~~~~~----~ 413 (470)
. ++..++..++.+++.+.|+++. .+..+ .+.+.++.|.+.... .+....++.++|.++|+++.+. .
T Consensus 243 ~~g~~~~~~~~~~~~~~l~~~L~~~~-----~~~~~~~~~~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~ 317 (345)
T cd06450 243 RDGYGEHIDRIVDLAKYLAELIRADP-----GFELLGEPNLSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPATTLGG 317 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC-----CeEEecCCceeEEEEEECCcchhhHHHHHHHHHHHhcCCEEEEeeEECC
Confidence 3 4456666667777777766532 22222 245667777665420 0135678999999996554332 3
Q ss_pred CCEEEEecCCCC-CHHHHHHHHHHHHH
Q 012138 414 DTIVRLTPPLSI-SSNELQEGSKALHD 439 (470)
Q Consensus 414 ~~~iR~~~~~~~-t~e~i~~~~~~l~~ 439 (470)
..++|+++...+ |++|++++++.|++
T Consensus 318 ~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 318 PNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred eEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 578999988765 99999999999875
No 265
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.84 E-value=6e-19 Score=175.96 Aligned_cols=342 Identities=16% Similarity=0.164 Sum_probs=203.5
Q ss_pred CCCCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHH
Q 012138 72 PEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKL 151 (470)
Q Consensus 72 ~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~ 151 (470)
..|..||||.+-.+. ..+.++..+++......+ ....-..+|++.++++++.+++++|+||++|+..++++
T Consensus 17 ~~~~v~iDlltds~t-------~ams~~~~~a~~~gd~~Y--~~~~g~~~Leeaia~~~g~~~vv~t~~Gt~Al~la~~a 87 (431)
T cd00617 17 RSEDVYIDLLTDSGT-------GAMSDYQWAAMMLGDEAY--AGSKSFYDLEDAVQDLFGFKHIIPTHQGRGAENILFSI 87 (431)
T ss_pred CCCCcCCCCCCCCCc-------HHHHHHHHHHHHhCCCcc--CCCCCHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHH
Confidence 346677888765332 245555555554332211 12344689999999999999999999999999999987
Q ss_pred HHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCe-----eeecCC-CHHHHHHHHHhcC-CC
Q 012138 152 ARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGH-----LKVDFG-DITALEKIFKESG-DQ 224 (470)
Q Consensus 152 ~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-d~~~Le~~l~~~~-~~ 224 (470)
+.. +|+ .| ...+.|..........++.+.. .+..+.. ..+..| |+++|++++++.+ .+
T Consensus 88 l~~---------pGD-~V-~~~~~f~~~~~~i~~~Ga~pv~----v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~ 152 (431)
T cd00617 88 LLK---------PGR-TV-PSNMHFDTTRGHIEANGAVPVD----LVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAEN 152 (431)
T ss_pred hCC---------CCC-EE-ccCCcccchHHHHHhCCCEeEE----EecccccccccccCCCCCcCHHHHHHHhCcccCCC
Confidence 754 566 44 4555554332222222222211 1111000 011111 8999999998642 35
Q ss_pred eEEEEEccccCCC-ccccCChhhHHHHHHHHHhcCcEEEEecccc-C---C------cccCCccc---cccCCCCcceee
Q 012138 225 IAGFLFEPIQGEA-GVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G---L------ARSGRMLA---SDWEEVRPDMVI 290 (470)
Q Consensus 225 ~~~vi~epi~n~~-G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g---~------g~~G~~~~---~~~~~~~pdi~s 290 (470)
+++|+++..+|++ |.++ +.+.+++|.++|++||++||+|+++. + | |+.+.... .+.+.. -|..+
T Consensus 153 ~~~I~v~~p~N~~gG~~~-s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~-sd~~~ 230 (431)
T cd00617 153 IPYIVLTITNNTAGGQPV-SMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSY-ADGCT 230 (431)
T ss_pred ccEEEEECCcCCCCCccC-CHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhcc-CCEEE
Confidence 7888887769986 8888 89999999999999999999999976 1 1 11111110 000111 13333
Q ss_pred cc--ccccCCCccee-EEEecH-HHHhhcCcC----CccCCCC-CCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 012138 291 LG--KALGGGVIPVS-AVLADK-EVMLCIQPG----EHGSTFG-GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHL 361 (470)
Q Consensus 291 ~s--K~l~gG~~~ig-~v~~~~-~~~~~~~~~----~~~~t~~-~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L 361 (470)
+| |.. +. ++| ++++++ ++++.++.. ....+++ .+...+++...+|+...+.+..++..+.++++.+.|
T Consensus 231 mS~~K~~--~~-~~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~~~~l~~~~~~r~~l~~~L 307 (431)
T cd00617 231 MSAKKDG--LV-NIGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVEEDYLRHRVEQVRYLGDRL 307 (431)
T ss_pred EEeecCC--CC-ccceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 33 222 22 444 677775 588777532 1112233 244444444336654322233333344457788888
Q ss_pred HHHHhhCCCceEEEeccceeEEEEeccCCC-------chhHHHHHHHHHHc-Cceecc-----------C------CCCE
Q 012138 362 FKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-------PVSAYDICLKMKER-GILAKP-----------T------HDTI 416 (470)
Q Consensus 362 ~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~l~~~-Gv~~~~-----------~------~~~~ 416 (470)
++.+ +..+.+.|.++.+ ++.... ..++.+++.+|.++ ||.+.. + ....
T Consensus 308 ~~~G------~~v~~P~Ggh~v~-~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~ 380 (431)
T cd00617 308 DEAG------VPIVEPAGGHAVF-IDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELEL 380 (431)
T ss_pred HHCC------CCccCCCcceEEE-EEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccce
Confidence 7753 3344556655554 332210 12478888777665 888531 1 1368
Q ss_pred EEEecCC-CCCHHHHHHHHHHHHHHHhcccCCCCC
Q 012138 417 VRLTPPL-SISSNELQEGSKALHDVLELDLPKMRK 450 (470)
Q Consensus 417 iR~~~~~-~~t~e~i~~~~~~l~~~l~~~~~~~~~ 450 (470)
+|+..|. ..|.++++.++++|.++++ +...+.-
T Consensus 381 ~rl~~prr~~t~~~~~~~~~~~~~~~~-~~~~~~~ 414 (431)
T cd00617 381 VRLAIPRRVYTQDHMDYVAAAVIALYE-RREDIRG 414 (431)
T ss_pred eEEeccccccCHHHHHHHHHHHHHHHh-hHhhCCC
Confidence 9998876 7899999999999999998 7655554
No 266
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.83 E-value=2e-19 Score=178.70 Aligned_cols=287 Identities=18% Similarity=0.227 Sum_probs=184.5
Q ss_pred CCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCccc
Q 012138 113 AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEA 192 (470)
Q Consensus 113 ~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~ 192 (470)
.+.++...++++.++++.|.+.+++++||++|+..++..+.. +|+ .|++..+. |+.+.......
T Consensus 50 r~~~p~~~~le~~la~l~g~~~~~~~~sG~~Ai~~al~al~~---------~Gd-~Vl~~~~~-~~~t~~~~~~~----- 113 (380)
T TIGR01325 50 RYANPTVAAFEERIAALEGAERAVATATGMSAIQAALMTLLQ---------AGD-HVVASRSL-FGSTVGFISEI----- 113 (380)
T ss_pred cCCCchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhC---------CCC-EEEEecCC-cchHHHHHHHH-----
Confidence 355677899999999999988999999999999999987654 466 56665555 44443221100
Q ss_pred ccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcc
Q 012138 193 IRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR 272 (470)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~ 272 (470)
...+ ...+..++.+|++++++++++ ++++|++|.++||+|.+.+ +++|.++|+++|+++|+|++|+.+.
T Consensus 114 ~~~~---g~~v~~v~~~d~~~l~~~i~~---~tklV~le~p~np~g~~~d----l~~I~~la~~~gi~livD~a~~~~~- 182 (380)
T TIGR01325 114 LPRF---GIEVSFVDPTDLNAWEAAVKP---NTKLVFVETPSNPLGELVD----IAALAELAHAIGALLVVDNVFATPV- 182 (380)
T ss_pred HHHh---CCEEEEECCCCHHHHHHhcCC---CceEEEEECCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCcccc-
Confidence 0000 012355666789999988865 7899999988999999998 9999999999999999999997321
Q ss_pred cCCccccccCCCCccee--eccccccC-CCcce-eEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHH
Q 012138 273 SGRMLASDWEEVRPDMV--ILGKALGG-GVIPV-SAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAE 348 (470)
Q Consensus 273 ~G~~~~~~~~~~~pdi~--s~sK~l~g-G~~~i-g~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~ 348 (470)
... .....+|++ +++|.++| |. ++ |++++++++++.++..........++..++.+...++.+.. ..+
T Consensus 183 ~~~-----pl~~g~Divv~S~sK~l~g~g~-~~gG~vv~~~~~~~~l~~~~~~~g~~~~p~~a~~~l~~l~tl~~--r~~ 254 (380)
T TIGR01325 183 LQQ-----PLKLGADVVVYSATKHIDGQGR-VMGGVIAGSEELMAEVAVYLRHTGPAMSPFNAWVLLKGLETLSL--RMQ 254 (380)
T ss_pred cCC-----chhhCCCEEEeeccceecCCCC-eEEEEEEeCHHHHHHHHHHHHhhCCCCCHHHHHHHHhccCcHHH--HHH
Confidence 111 112235766 68899986 55 55 67778888877765432222223566666666655555543 345
Q ss_pred HHHHHHHHHHHHHHHHHh----hCCCce---------EEEeccceeEEEEeccCCCchhHHHHHHHHHHc--Ccee----
Q 012138 349 RSAHLGEELRQHLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKER--GILA---- 409 (470)
Q Consensus 349 ~~~~~~~~l~~~L~~l~~----~~p~~~---------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~--Gv~~---- 409 (470)
+..+++.++.+.|++... .||... ....+.|.++.++++ +. ....+|.+.|+-- ++..
T Consensus 255 ~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~-~~--~~~~~f~~~l~~~~~~~s~G~~~ 331 (380)
T TIGR01325 255 KQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVA-DR--AAAWKVLDAVELVSITNNLGDAK 331 (380)
T ss_pred HHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEC-CH--HHHHHHHHcCCcceEcccCCCCC
Confidence 555566666666665321 122110 012356889999886 22 2556677666422 2111
Q ss_pred ----ccC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 012138 410 ----KPT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVL 441 (470)
Q Consensus 410 ----~~~-----------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l 441 (470)
.|. .++.|||+..+ |+.+.+++-|+++|
T Consensus 332 sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al 380 (380)
T TIGR01325 332 STITHPATTTHGRMQPEERAAAGIGDGLVRLSVGL----EDVDDLIADLKRAL 380 (380)
T ss_pred eeeeCCCccCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHhhC
Confidence 111 14689999554 56677777776653
No 267
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.83 E-value=4.6e-19 Score=176.90 Aligned_cols=289 Identities=19% Similarity=0.233 Sum_probs=183.5
Q ss_pred CCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhc-ccCCc
Q 012138 112 RAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAIS-MSCDN 190 (470)
Q Consensus 112 ~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~-~~~~~ 190 (470)
..+.++...+|++.|+++.|.+.+++++||+.|+..++..+.. +|+ .|++....| +.+..... ....
T Consensus 65 ~r~~~p~~~~le~~lA~l~g~~~al~~~sG~~Ai~~~l~all~---------~Gd-~Vl~~~~~~-~~t~~~~~~~~~~- 132 (403)
T PRK07810 65 SRYGNPTVSMFEERLRLIEGAEACFATASGMSAVFTALGALLG---------AGD-RLVAARSLF-GSCFVVCNEILPR- 132 (403)
T ss_pred eCCCCchHHHHHHHHHHHhCCCcEEEECChHHHHHHHHHHHhC---------CCC-EEEEccCCc-chHHHHHHHHHHH-
Confidence 3356777899999999999999999999999999998876654 566 566555443 33322111 0000
Q ss_pred ccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-C
Q 012138 191 EAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G 269 (470)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g 269 (470)
....+..++.+|++++++++++ ++++|++|.++||+|.+.+ +++|.++|+++|+++|+|++|+ +
T Consensus 133 --------~G~~v~~vd~~d~~~l~~ai~~---~tklV~~esp~Nptg~v~d----l~~I~~la~~~g~~vivD~a~a~~ 197 (403)
T PRK07810 133 --------WGVETVFVDGEDLSQWEEALSV---PTQAVFFETPSNPMQSLVD----IAAVSELAHAAGAKVVLDNVFATP 197 (403)
T ss_pred --------cCcEEEEECCCCHHHHHHhcCc---CceEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCCcc
Confidence 0012355566689999999976 7899999988999999998 9999999999999999999997 2
Q ss_pred CcccCCccccccCCCCccee--eccccccC-CCcce-eEEEecHHHHh-hcCcCCccCCCCCCHHHHHHHHHHHHHHhhh
Q 012138 270 LARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPV-SAVLADKEVML-CIQPGEHGSTFGGNPLASAVAIASLDVIRDE 344 (470)
Q Consensus 270 ~g~~G~~~~~~~~~~~pdi~--s~sK~l~g-G~~~i-g~v~~~~~~~~-~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~ 344 (470)
+.. .. . ..+ .|++ +++|.++| |. ++ |+++++++.+. .++..........++..++.+...|+.+..
T Consensus 198 ~~~--~~--~-~~g--aDivv~S~tK~l~g~g~-~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~tl~~- 268 (403)
T PRK07810 198 LLQ--RG--L-PLG--ADVVVYSGTKHIDGQGR-VLGGAILGDREYIDGPVQKLMRHTGPALSAFNAWVLLKGLETLAL- 268 (403)
T ss_pred ccC--Ch--h-hcC--CcEEEccCCceecCCcC-ceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHhccCcHHH-
Confidence 211 11 1 123 3655 67799985 65 55 77777776554 233221222335788888888777776543
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh----hCCCceE---------EEeccceeEEEEeccCC--CchhHHHHHHHHHHc----
Q 012138 345 KLAERSAHLGEELRQHLFKIQQ----QFPNYVK---------EVRGRGLFNAVEFDKTA--LPVSAYDICLKMKER---- 405 (470)
Q Consensus 345 ~~~~~~~~~~~~l~~~L~~l~~----~~p~~~~---------~~~~~g~~~~~~~~~~~--~~~~~~~~~~~l~~~---- 405 (470)
..++..++..++.+.|++... .||.... ...+.|.++.++++... ....+.+|++.|+--
T Consensus 269 -R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~~f~~~l~l~~~~~ 347 (403)
T PRK07810 269 -RVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPEDAAKKRAFEVLDKLRVIDISN 347 (403)
T ss_pred -HHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCCCcCHHHHHHHHHhCCceEEec
Confidence 445555566666666654321 1221000 11266889999886421 012345566644311
Q ss_pred ------CceeccC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 012138 406 ------GILAKPT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVL 441 (470)
Q Consensus 406 ------Gv~~~~~-----------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l 441 (470)
.++..|. .++.+||+..+ |+++++++-|.++|
T Consensus 348 slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~lvR~svGl----E~~~dli~dl~~Al 402 (403)
T PRK07810 348 NLGDAKSLITHPATTTHRAMGPEGRAAIGLGDGVVRLSVGL----EDTDDLIADLDRAL 402 (403)
T ss_pred cCCCCcceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHhh
Confidence 1222221 14689999554 56777777777665
No 268
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.83 E-value=1.6e-18 Score=172.36 Aligned_cols=308 Identities=16% Similarity=0.184 Sum_probs=194.7
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEc
Q 012138 94 PKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCC 173 (470)
Q Consensus 94 p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~ 173 (470)
++-.+++.+.++....+. ..+...+++++++++++.+++++++||++|+..++.++.. .+|+ .|++..
T Consensus 11 ~~~~~~~~~~l~~~~~~g---~~~~~~~~e~~la~~~g~~~~v~~~sgt~al~~~l~~~~~--------~~Gd-~Viv~~ 78 (375)
T PRK11706 11 GTELDYIQQAMSSGKLCG---DGGFTRRCQQWLEQRFGSAKVLLTPSCTAALEMAALLLDI--------QPGD-EVIMPS 78 (375)
T ss_pred HHHHHHHHHHHHcCCccC---CCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHhCC--------CCCC-EEEECC
Confidence 444667777776543321 2456789999999999999999999999999988875521 1455 788888
Q ss_pred cCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHH
Q 012138 174 GCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDL 253 (470)
Q Consensus 174 ~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l 253 (470)
++|..........+.... +.+..++...+ |++++++++++ ++++|++. +++|...+ +++|.++
T Consensus 79 ~t~~~~~~~~~~~G~~~v----~~d~d~~~~~~---d~~~le~~i~~---~tk~i~~~---~~~G~~~~----~~~i~~l 141 (375)
T PRK11706 79 YTFVSTANAFVLRGAKIV----FVDIRPDTMNI---DETLIEAAITP---KTRAIVPV---HYAGVACE----MDTIMAL 141 (375)
T ss_pred CCcHHHHHHHHHcCCEEE----EEecCCCcCCc---CHHHHHHhcCC---CCeEEEEe---CCCCCccC----HHHHHHH
Confidence 887654333322222211 11221222222 79999999876 68888843 46888886 9999999
Q ss_pred HHhcCcEEEEeccccCCc-ccCCccccccCCCCcceeecc----ccccCCCcceeEEEecHHHHhhcCcCC---------
Q 012138 254 CSKYNILMIADEIQSGLA-RSGRMLASDWEEVRPDMVILG----KALGGGVIPVSAVLADKEVMLCIQPGE--------- 319 (470)
Q Consensus 254 ~~~~gillI~Dev~~g~g-~~G~~~~~~~~~~~pdi~s~s----K~l~gG~~~ig~v~~~~~~~~~~~~~~--------- 319 (470)
|++||++||+|++|+-+. ..|+.. +..-|+.+|| |.++.|. +.++++.++++.++++...
T Consensus 142 a~~~~i~vIeD~a~a~g~~~~~~~~-----g~~~~~~~~Sf~~~K~l~~g~-gG~~~~~~~~~~~~~~~~~~~g~~~~~~ 215 (375)
T PRK11706 142 AKKHNLFVVEDAAQGVMSTYKGRAL-----GTIGHIGCFSFHETKNYTAGE-GGALLINDPALIERAEIIREKGTNRSQF 215 (375)
T ss_pred HHHcCCEEEEECccccccccCCeee-----ecCcCEEEEeCCCCccccccC-CeEEEECCHHHHHHHHHHHHcCCCcchh
Confidence 999999999999998221 223221 1122677777 9998776 6667777788776443211
Q ss_pred ------------ccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh----hCCCceEEEeccceeEE
Q 012138 320 ------------HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYVKEVRGRGLFNA 383 (470)
Q Consensus 320 ------------~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~----~~p~~~~~~~~~g~~~~ 383 (470)
.+.++-.+.+.++.+.+.|+.+ +.+.++.+++.+++.+.|..+.. .+|...........++.
T Consensus 216 ~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l--~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (375)
T PRK11706 216 FRGQVDKYTWVDIGSSYLPSELQAAYLWAQLEAA--DRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFY 293 (375)
T ss_pred hccCCCcceeeecccccCcCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEE
Confidence 1233335667777777777665 33556677777777777765421 11100000111223444
Q ss_pred EEeccCCCchhHHHHHHHHHHcCceeccC----C----------------------CCEEEEecCCCCCHHHHHHHHHHH
Q 012138 384 VEFDKTALPVSAYDICLKMKERGILAKPT----H----------------------DTIVRLTPPLSISSNELQEGSKAL 437 (470)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----~----------------------~~~iR~~~~~~~t~e~i~~~~~~l 437 (470)
+.++.. .+..++.+.|.++||.+... . .+.+.+-.....+++|++..++.|
T Consensus 294 ~~~~~~---~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i 370 (375)
T PRK11706 294 IKLRDL---EDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTI 370 (375)
T ss_pred EEECCc---CCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHH
Confidence 444432 26789999999999985411 0 233444334457899999999999
Q ss_pred HHHH
Q 012138 438 HDVL 441 (470)
Q Consensus 438 ~~~l 441 (470)
++++
T Consensus 371 ~~~~ 374 (375)
T PRK11706 371 LEFF 374 (375)
T ss_pred HHHh
Confidence 8875
No 269
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.83 E-value=4.4e-19 Score=177.03 Aligned_cols=289 Identities=16% Similarity=0.183 Sum_probs=185.0
Q ss_pred CCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCccc
Q 012138 113 AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEA 192 (470)
Q Consensus 113 ~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~ 192 (470)
.+.++...+|++.++++.|.+..+.++||+.|+..++..... +|+ .|++..+.|.+.............
T Consensus 61 r~~~p~~~~Le~~lA~l~G~~~~~~~~sG~~Ai~~~l~~~l~---------~Gd-~Vl~~~~~y~~~~~~~~~~~~~~G- 129 (398)
T PRK07504 61 RYSNPTVDMFEKRMCALEGAEDARATASGMAAVTAAILCQVK---------AGD-HVVAARALFGSCRYVVETLLPRYG- 129 (398)
T ss_pred cCCCchHHHHHHHHHHHhCCCeeeEecCHHHHHHHHHHHHhC---------CCC-EEEEcCCchhHHHHHHHHHHhhcC-
Confidence 345677899999999999998888899999999887765543 566 677777776543222111100000
Q ss_pred ccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcc
Q 012138 193 IRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR 272 (470)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~ 272 (470)
..+..++..|++++++++++ ++++|+++.++||+|.+.+ +++|.++|+++|+++|+|++|+...
T Consensus 130 --------~~v~~vd~~d~e~l~~ai~~---~tklV~lesp~NptG~v~d----l~~I~~la~~~gi~lvvD~a~a~~~- 193 (398)
T PRK07504 130 --------IESTLVDGLDLDNWEKAVRP---NTKVFFLESPTNPTLEVID----IAAVAKIANQAGAKLVVDNVFATPL- 193 (398)
T ss_pred --------eEEEEECCCCHHHHHHhcCc---CceEEEEECCCCCCcEecC----HHHHHHHHHHcCCEEEEECCccccc-
Confidence 11233444589999998875 7899998888999999998 9999999999999999999997211
Q ss_pred cCCccccccCCCCccee--eccccccC-CCccee-EEEecHHHHh-hcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHH
Q 012138 273 SGRMLASDWEEVRPDMV--ILGKALGG-GVIPVS-AVLADKEVML-CIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLA 347 (470)
Q Consensus 273 ~G~~~~~~~~~~~pdi~--s~sK~l~g-G~~~ig-~v~~~~~~~~-~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~ 347 (470)
.... ..++ .|++ +++|.++| |. ++| +++++++.+. .++..........++..++.+...|+.+.. ..
T Consensus 194 ~~~~---~~~g--aDivv~S~sK~l~g~g~-~~GG~vv~~~~~i~~~~~~~~~~~g~~~s~~~A~~~l~~L~tl~~--R~ 265 (398)
T PRK07504 194 FQKP---LELG--AHIVVYSATKHIDGQGR-CLGGVVLSDKAWIEEHLQDYFRHTGPSLSPFNAWTLLKGLETLPV--RV 265 (398)
T ss_pred cCCc---hhhC--CCEEEeeccccccCCcc-ceEEEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhccchHHH--HH
Confidence 1111 1123 3554 77899975 76 775 5667766554 232211222335788888888887776643 44
Q ss_pred HHHHHHHHHHHHHHHHHHh----hCCCceE---------EEeccceeEEEEeccCCCchhHHHHHHHHHHcCceec----
Q 012138 348 ERSAHLGEELRQHLFKIQQ----QFPNYVK---------EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK---- 410 (470)
Q Consensus 348 ~~~~~~~~~l~~~L~~l~~----~~p~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~---- 410 (470)
++..++..++.+.|++... .||.... ..++.|.++.+++.... ..+.+|++.|.--.+.++
T Consensus 266 ~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~--~~~~~~~~~l~~~~~~~slG~~ 343 (398)
T PRK07504 266 RQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGK--EAAFRFLNALKIVRISNNLGDA 343 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCH--HHHHHHHHhCCcceecccCCCC
Confidence 4555666667676665321 2221111 12355889999885321 245566666542222111
Q ss_pred ------cC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 411 ------PT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 411 ------~~-----------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
|. .++.+||+..+ |+.+++++-|.++|+
T Consensus 344 ~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 394 (398)
T PRK07504 344 KSLITHPATTTHKNLSPEARAELGISEGFLRLSAGL----EDTDDLIEDLAAALK 394 (398)
T ss_pred CeeeeCCCCCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHH
Confidence 11 15789999554 566777777777776
No 270
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.83 E-value=2.5e-18 Score=165.83 Aligned_cols=308 Identities=18% Similarity=0.235 Sum_probs=207.1
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEc
Q 012138 94 PKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCC 173 (470)
Q Consensus 94 p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~ 173 (470)
.+..+++.+.+++..... .+.-.++++.++++.|.++++.++|||.|++++++++- +.+|| .||+..
T Consensus 15 ~~e~~~v~~vl~sg~i~~----G~~v~~FE~~~ae~~G~k~ava~~sgT~AL~laL~al~--------ig~GD-eVI~ps 81 (374)
T COG0399 15 EEELAAVQEVLKSGWLTG----GPFVRRFEQAFAEYLGVKYAVAVSSGTAALHLALLALA--------IGPGD-EVIVPS 81 (374)
T ss_pred hHHHHHHHHHHHcCCeec----ChHHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHhcC--------CCCCC-EEEecC
Confidence 556777888887765543 34568999999999999999999999999999999553 12666 777877
Q ss_pred cCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHH
Q 012138 174 GCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDL 253 (470)
Q Consensus 174 ~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l 253 (470)
.+|-......+..+..|.+ ....++...+ |++.||++|++ ++++||.-.. .|...+ +++|.++
T Consensus 82 ~TfvATan~i~~~Ga~PVF----vDid~~T~ni---d~~~ie~aIt~---~tKAIipVhl---~G~~~d----m~~i~~l 144 (374)
T COG0399 82 FTFVATANAVLLVGAKPVF----VDIDPDTLNI---DPDLIEAAITP---RTKAIIPVHL---AGQPCD----MDAIMAL 144 (374)
T ss_pred CchHHHHHHHHHcCCeEEE----EecCCcccCC---CHHHHHHHccc---CCeEEEEehh---ccCCCC----HHHHHHH
Confidence 7875444333433333333 3444444445 99999999997 7999995442 456666 9999999
Q ss_pred HHhcCcEEEEecccc-CCcccCCccccccCCCCcceeecc----ccccCCCcceeEEE-ecHHHHhhcCcC---------
Q 012138 254 CSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDMVILG----KALGGGVIPVSAVL-ADKEVMLCIQPG--------- 318 (470)
Q Consensus 254 ~~~~gillI~Dev~~-g~g~~G~~~~~~~~~~~pdi~s~s----K~l~gG~~~ig~v~-~~~~~~~~~~~~--------- 318 (470)
|++||++||.|.+|+ |--+.|+. .|-.-|+.+|| |.++.| -.|+++ -++++.++++..
T Consensus 145 a~~~~l~vIEDaAqa~Ga~y~gk~-----vGt~Gd~~~fSF~~~K~ittg--EGGav~tnd~ela~k~~~lr~hG~~~~~ 217 (374)
T COG0399 145 AKRHGLPVIEDAAQAHGATYKGKK-----VGSFGDIGAFSFHATKNLTTG--EGGAVVTNDEELAEKARSLRNHGLSRDA 217 (374)
T ss_pred HHHcCCeEEEEcchhccCeecCcc-----cccccceEEEEecCCCCcccc--CceEEEeCCHHHHHHHHHHHHhCcCCCc
Confidence 999999999999998 43344432 12223666666 878744 233444 567777665421
Q ss_pred -------CccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH-hhCCCceEEEeccceeEEEEeccCC
Q 012138 319 -------EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQ-QQFPNYVKEVRGRGLFNAVEFDKTA 390 (470)
Q Consensus 319 -------~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~-~~~p~~~~~~~~~g~~~~~~~~~~~ 390 (470)
..|..+..+.+.+|.+++.|+.++ ++.++.++..+.+.+.|.++. ...|.........-.++.+.++..
T Consensus 218 ~~~y~~~~~G~N~rm~~iqAAigl~QL~~l~--~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~- 294 (374)
T COG0399 218 VFKYLHEELGYNYRLTEIQAAIGLAQLERLD--EINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEE- 294 (374)
T ss_pred cccceeeecccccCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCC-
Confidence 124445577788888888887664 477788888888888888753 122201111111122333334432
Q ss_pred CchhHHHHHHHHHHcCcee----ccCC-----------------------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 391 LPVSAYDICLKMKERGILA----KPTH-----------------------DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 391 ~~~~~~~~~~~l~~~Gv~~----~~~~-----------------------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
+.+...+.+.|.++||.. .|.+ ...+.+-....++++++++.++.|.+++.
T Consensus 295 -~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~ 372 (374)
T COG0399 295 -GISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLG 372 (374)
T ss_pred -CCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhc
Confidence 236788999999997652 2311 35566665567899999999999999886
No 271
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.83 E-value=5e-19 Score=176.24 Aligned_cols=291 Identities=14% Similarity=0.141 Sum_probs=187.2
Q ss_pred CCCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCc
Q 012138 111 SRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDN 190 (470)
Q Consensus 111 ~~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~ 190 (470)
+..+.++...+|++.++++.|.+.+++++||++|+..++..+.. +|+ .|++..+.|. .+.........
T Consensus 53 y~r~~~p~~~~le~~lA~l~g~~~av~~~sG~~Ai~~~l~al~~---------~Gd-~Vi~~~~~y~-~t~~~~~~~~~- 120 (391)
T TIGR01328 53 YSRLGNPTVSNLEGRIAFLEGTEAAVATSSGMGAIAATLLTILK---------AGD-HLISDECLYG-CTFALLEHALT- 120 (391)
T ss_pred eeCCCCchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhC---------CCC-EEEEecCcch-HHHHHHHHHHh-
Confidence 33456677899999999999999999999999999998876654 466 6777777653 32221111000
Q ss_pred ccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCC
Q 012138 191 EAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 270 (470)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~ 270 (470)
.....+..++.+|++++++++++ ++++|++|.++||+|.+.+ +++|.++|+++|+++|+|++|+..
T Consensus 121 -------~~G~~~~~vd~~d~e~l~~~i~~---~tklV~le~p~Np~G~v~d----l~~I~~la~~~gi~livD~a~a~~ 186 (391)
T TIGR01328 121 -------KFGIQVDFINMAIPEEVKAHIKD---NTKIVYFETPANPTMKLID----MERVCRDAHSQGVKVIVDNTFATP 186 (391)
T ss_pred -------cCCeEEEEECCCCHHHHHHhhcc---CCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCchh
Confidence 00011345555689999988875 7899998888999999998 999999999999999999999721
Q ss_pred cccCCccccccCCCCccee--eccccccC-CCcc-eeEEEecHHHHhhcCcCCc--cCCCCCCHHHHHHHHHHHHHHhhh
Q 012138 271 ARSGRMLASDWEEVRPDMV--ILGKALGG-GVIP-VSAVLADKEVMLCIQPGEH--GSTFGGNPLASAVAIASLDVIRDE 344 (470)
Q Consensus 271 g~~G~~~~~~~~~~~pdi~--s~sK~l~g-G~~~-ig~v~~~~~~~~~~~~~~~--~~t~~~~~~~~aaa~a~l~~~~~~ 344 (470)
..+... +...|++ +++|.+++ |. + .|++++++++++.++.... ......++..++.+...|+.+.
T Consensus 187 -~~~~~~-----~~g~Divv~S~sK~lgg~g~-~~gG~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~tl~-- 257 (391)
T TIGR01328 187 -MLTNPV-----ALGVDVVVHSATKYIGGHGD-VVAGLICGKAELLQQIRMVGIKDMTGSVISPFDAWLILRGLKTLN-- 257 (391)
T ss_pred -ccCCch-----hcCCCEEEccccccccCCCC-ceEEEEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcCcHH--
Confidence 122211 1223554 77899984 54 4 5777888988877653211 1123457777777666555442
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh----hCCCce---------EEEeccceeEEEEeccCCCchhHHHHHHHHHH--cCcee
Q 012138 345 KLAERSAHLGEELRQHLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKE--RGILA 409 (470)
Q Consensus 345 ~~~~~~~~~~~~l~~~L~~l~~----~~p~~~---------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~--~Gv~~ 409 (470)
...++..++..++.+.|++... .||... ...++.|.++.++++... ....+|.+.|.- .+...
T Consensus 258 ~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~--~~~~~f~~~l~~~~~~~s~ 335 (391)
T TIGR01328 258 IRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGGF--AGAKKLLNNLKLIRLAVSL 335 (391)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCCH--HHHHHHHHhCCcceEecCC
Confidence 3455666677777777765321 222110 112356889999886321 234556655531 12111
Q ss_pred c--------cC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 410 K--------PT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 410 ~--------~~-----------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
. |. .++.|||++.+ |+.+.+++-|.++|+
T Consensus 336 G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 389 (391)
T TIGR01328 336 GDAETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGL----EDADDLIADLKQALD 389 (391)
T ss_pred CCCcccCcCCCccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHh
Confidence 0 11 14689999554 667888888888876
No 272
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.83 E-value=2.7e-18 Score=170.82 Aligned_cols=310 Identities=16% Similarity=0.176 Sum_probs=195.6
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHH-HHhchhcccCCCCCcEEEEE
Q 012138 94 PKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLA-RKWGYVKKKFSIDEAIIVSC 172 (470)
Q Consensus 94 p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~-~~~~~~~~~~~~g~~~ii~~ 172 (470)
++-.+++.+.++.... +..+...+|++.+++++|.+.+++++||++|+.+++..+ .. +|+ .||+.
T Consensus 14 ~~e~~~~~~~l~~~~~----~~g~~~~~le~~la~~~g~~~~v~~~sgt~al~lal~al~~~---------~Gd-~Viv~ 79 (379)
T PRK11658 14 DEELAAVKEVLRSGWI----TTGPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALGIG---------PGD-EVITP 79 (379)
T ss_pred HHHHHHHHHHHHcCCc----cCCHhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCC---------CCC-EEEEC
Confidence 5567777777765433 234567899999999999999999999999999999866 32 455 77788
Q ss_pred ccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHH
Q 012138 173 CGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRD 252 (470)
Q Consensus 173 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~ 252 (470)
.++|.+........+..+. +.+..++...+ |++++++++++ ++++|+ | .+++|...+ +++|.+
T Consensus 80 ~~~~~~~~~~~~~~G~~~v----~vd~~~~~~~~---d~~~l~~~i~~---~tkav~--~-~~~~G~~~d----~~~i~~ 142 (379)
T PRK11658 80 SLTWVSTLNMIVLLGATPV----MVDVDRDTLMV---TPEAIEAAITP---RTKAII--P-VHYAGAPAD----LDAIRA 142 (379)
T ss_pred CCcHHHHHHHHHHcCCEEE----EEecCCCcCCc---CHHHHHHhccc---CCeEEE--E-eCCCCCcCC----HHHHHH
Confidence 8887654332222221111 11111111122 88999999875 788887 3 456898887 999999
Q ss_pred HHHhcCcEEEEecccc-CCcccCCccccccCCCCcceeecc--ccccCCCcceeEEEe-cHHHHhhcCcCC---------
Q 012138 253 LCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLA-DKEVMLCIQPGE--------- 319 (470)
Q Consensus 253 l~~~~gillI~Dev~~-g~g~~G~~~~~~~~~~~pdi~s~s--K~l~gG~~~ig~v~~-~~~~~~~~~~~~--------- 319 (470)
+|++||+++|+|++|+ |....|... ..++. ++.+|+ |.+++| +.|+++. ++++.+.++...
T Consensus 143 ~a~~~gi~vi~D~a~a~g~~~~~~~~--g~~g~--~~~Sf~~~K~l~~g--~GG~v~~~~~~~~~~~~~~~~~G~~~~~~ 216 (379)
T PRK11658 143 IGERYGIPVIEDAAHAVGTYYKGRHI--GARGT--AIFSFHAIKNITCA--EGGLVVTDDDELADRLRSLKFHGLGVDAF 216 (379)
T ss_pred HHHHcCCeEEEECCCccCCeECCeec--CCCCC--EEEeCCCCCcCccc--CceEEEECCHHHHHHHHHHHHcCCCcchh
Confidence 9999999999999998 543344321 22343 677777 667665 5666775 477766553211
Q ss_pred ---------------ccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEE-EeccceeEE
Q 012138 320 ---------------HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKE-VRGRGLFNA 383 (470)
Q Consensus 320 ---------------~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~-~~~~g~~~~ 383 (470)
.+..+..+.+.++.+...++.+ +++.++.+++.+++.+.|.++.......... .......+.
T Consensus 217 ~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l--~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 294 (379)
T PRK11658 217 DRQTQGRAPQAEVLTPGYKYNLADINAAIALVQLAKL--EALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFI 294 (379)
T ss_pred hhhcccCCCcceeeccccccCcCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEE
Confidence 1223335566666666666554 4466788888888888887642110000000 001112333
Q ss_pred EEeccCCCchhHHHHHHHHHHcCceeccC----C---------------------CCEEEEecCCCCCHHHHHHHHHHHH
Q 012138 384 VEFDKTALPVSAYDICLKMKERGILAKPT----H---------------------DTIVRLTPPLSISSNELQEGSKALH 438 (470)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----~---------------------~~~iR~~~~~~~t~e~i~~~~~~l~ 438 (470)
+.++....+.+..++.+.|.++||.+... + ...+.+-.....|++++++.++.|+
T Consensus 295 ~~~~~~~~~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~ 374 (379)
T PRK11658 295 IRVDEERCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQ 374 (379)
T ss_pred EEECCccccCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHH
Confidence 43432111236788999999999876521 0 2344444445689999999999999
Q ss_pred HHHh
Q 012138 439 DVLE 442 (470)
Q Consensus 439 ~~l~ 442 (470)
+++.
T Consensus 375 ~~~~ 378 (379)
T PRK11658 375 QIAG 378 (379)
T ss_pred HHHh
Confidence 8764
No 273
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.83 E-value=4.1e-19 Score=176.89 Aligned_cols=287 Identities=17% Similarity=0.200 Sum_probs=180.4
Q ss_pred CCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhc-ccCCccc
Q 012138 114 FYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAIS-MSCDNEA 192 (470)
Q Consensus 114 ~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~-~~~~~~~ 192 (470)
+.++...++++.++++.|.+.+++++||++|+..++..+.+ +|+ .||+..+.|.+ +..... ....
T Consensus 58 ~~~p~~~~le~~la~l~g~~~~v~~ssG~~Ai~~al~al~~---------~Gd-~Vi~~~~~y~~-t~~~~~~~~~~--- 123 (390)
T PRK08133 58 FTNPTVTMFQERLAALEGAEACVATASGMAAILAVVMALLQ---------AGD-HVVSSRSLFGS-TVSLFEKIFAR--- 123 (390)
T ss_pred CCChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhC---------CCC-EEEEccCcchh-HHHHHHHHHHH---
Confidence 45677899999999999999999999999999999887654 466 66666666533 222110 0000
Q ss_pred ccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcc
Q 012138 193 IRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR 272 (470)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~ 272 (470)
....+..++.+|++++++++++ ++++|++|.++||+|.+.+ +++|.++|++||+++|+|++++...
T Consensus 124 ------~G~~v~~vd~~d~~~l~~~i~~---~tklV~ie~p~NptG~v~d----l~~I~~la~~~gi~livD~t~~~~~- 189 (390)
T PRK08133 124 ------FGIETTFVDLTDLDAWRAAVRP---NTKLFFLETPSNPLTELAD----IAALAEIAHAAGALLVVDNCFCTPA- 189 (390)
T ss_pred ------cCcEEEEECCCCHHHHHHhcCc---CCeEEEEECCCCCCCCcCC----HHHHHHHHHHcCCEEEEECCCcccc-
Confidence 0012355666689999998875 7899999888999999998 9999999999999999999986211
Q ss_pred cCCccccccCCCCccee--eccccccC-CCcce-eEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHH
Q 012138 273 SGRMLASDWEEVRPDMV--ILGKALGG-GVIPV-SAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAE 348 (470)
Q Consensus 273 ~G~~~~~~~~~~~pdi~--s~sK~l~g-G~~~i-g~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~ 348 (470)
..... ..+ .|++ +++|.++| |. ++ |++++++++++.+...........++..+..+...++.+. ...+
T Consensus 190 ~~~pl---~~g--~Divv~S~sK~~~g~g~-~~GG~vv~~~~~~~~~~~~~~~~g~~~~~~~a~~~l~gl~tl~--~R~~ 261 (390)
T PRK08133 190 LQQPL---KLG--ADVVIHSATKYLDGQGR-VLGGAVVGSKELMEEVFGFLRTAGPTLSPFNAWVFLKGLETLS--LRME 261 (390)
T ss_pred cCCch---hhC--CcEEEeecceeecCCcc-eEeEEEEcCHHHHHHHHHHHHHhCCCCCHHHHHHHHcccchHH--HHHH
Confidence 11111 122 3554 77899985 65 66 5666777776655432222233456666665555544332 2333
Q ss_pred HHHHHHHHHHHHHHHHHh----hCCCce---------EEEeccceeEEEEeccCCCchhHHHHHHHHHHc--Ccee----
Q 012138 349 RSAHLGEELRQHLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKER--GILA---- 409 (470)
Q Consensus 349 ~~~~~~~~l~~~L~~l~~----~~p~~~---------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~--Gv~~---- 409 (470)
+..++...+.+.|++... .||... ....+.|.++.+++.... ....+|.+.|+-- ++..
T Consensus 262 ~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~--~~~~~f~~~l~l~~~~~slG~~~ 339 (390)
T PRK08133 262 AHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGGR--EAAWRVIDATRLISITANLGDTK 339 (390)
T ss_pred HHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCH--HHHHHHHHhCCcceEeccCCCcc
Confidence 444455556665554311 122110 012356889999885321 2355666655321 2111
Q ss_pred ----ccC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 410 ----KPT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 410 ----~~~-----------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
.|. .++.|||++.+ |+.+.+++-|+++|+
T Consensus 340 sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 389 (390)
T PRK08133 340 TTITHPATTTHGRLSPEARAAAGITEGLIRVAVGL----EDVADIKADLARGLA 389 (390)
T ss_pred eeeecCCCCCcccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHhh
Confidence 111 15689999554 567888888887775
No 274
>PRK06460 hypothetical protein; Provisional
Probab=99.83 E-value=9e-19 Score=173.61 Aligned_cols=285 Identities=14% Similarity=0.144 Sum_probs=179.5
Q ss_pred CCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCcccccc---chhcccCCc
Q 012138 114 FYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTL---AAISMSCDN 190 (470)
Q Consensus 114 ~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~---~~~~~~~~~ 190 (470)
..++...++++.++++.|.+..+.++||++|+..++..+.. +|+ .|++..+.|.+... ......+
T Consensus 42 ~~~p~~~~L~~~lA~l~g~~~~v~~~sG~~ai~~~l~al~~---------~Gd-~Vl~~~~~~~~ty~~~~~~~~~~G-- 109 (376)
T PRK06460 42 EANPTVLELTKKIVELENAEMGVAFSSGMGAISTTALALLK---------PGN-SVLVHRDMFGRSYRFFTDYLKNWG-- 109 (376)
T ss_pred CCCccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhC---------CCC-EEEEecCCcCcHHHHHHHHHHhhC--
Confidence 45677899999999999887777778899999988886654 566 56665554422111 1111111
Q ss_pred ccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCC
Q 012138 191 EAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 270 (470)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~ 270 (470)
..+..++.++.+.+++++++ ++++|+++.++||+|.+.+ +++|.++|++||+++|+||+|...
T Consensus 110 ----------~~v~~~~~~~~~~l~~~~~~---~tklV~l~sp~NPtG~v~d----~~~I~~la~~~g~~vivDea~~~~ 172 (376)
T PRK06460 110 ----------VNVDASNPGSDNIIEKAKSK---RYDVVFVENITNPLLRVVD----ITELSKVCKENGSILIVDATFSTP 172 (376)
T ss_pred ----------cEEEEECCCCHHHHHHhcCC---CceEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCcCcc
Confidence 11234444555556554433 7889998888999999998 889999999999999999999732
Q ss_pred cccCCccccccCCCCccee--eccccccC--CCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhH
Q 012138 271 ARSGRMLASDWEEVRPDMV--ILGKALGG--GVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKL 346 (470)
Q Consensus 271 g~~G~~~~~~~~~~~pdi~--s~sK~l~g--G~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~ 346 (470)
..... . ..+ .|++ |++|.++| +. ++|++++++++++.++......+.+.++..+..+...++.++ ..
T Consensus 173 -~~~~~--l-~~~--~divv~S~sK~l~G~~~~-~~G~~~~~~~l~~~l~~~~~~~g~~~~~~~a~~~l~~~~~l~--~r 243 (376)
T PRK06460 173 -INQKP--L-ELG--ADIVVHSASKFLAGHNDV-IAGLAAGYGKLLNVIDQMRRTLGTSLDPHAAYLTLRGIKTLK--IR 243 (376)
T ss_pred -ccCCh--h-hcC--CCEEEeecceeccCCCCc-eEEEEecCHHHHHHHHHHHHhcCCCCCHHHHHHHHhchhhHH--HH
Confidence 11111 1 122 3554 88999974 34 789999999998877643333333455655555544555443 34
Q ss_pred HHHHHHHHHHHHHHHHHHHh----hCCCce---------EEEeccceeEEEEeccCCCchhHHHHHHHHHH--cCcee--
Q 012138 347 AERSAHLGEELRQHLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKE--RGILA-- 409 (470)
Q Consensus 347 ~~~~~~~~~~l~~~L~~l~~----~~p~~~---------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~--~Gv~~-- 409 (470)
.++..+++.++.+.|++... .||... ....+.|.++.++++.+. ....+|++.|.- .+...
T Consensus 244 ~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~~--~~~~~~~~~l~~~~~~~s~Gg 321 (376)
T PRK06460 244 MDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGGQ--ESALKVMKSLKLIIPAQTLGG 321 (376)
T ss_pred HHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCcH--HHHHHHHHhCCcceeccCCCC
Confidence 56667777777777765321 222110 012356889999886431 245566665531 11111
Q ss_pred ------ccC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 410 ------KPT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 410 ------~~~-----------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
.|. .++.|||++.+ |+.+.+++.|.++|+
T Consensus 322 ~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 373 (376)
T PRK06460 322 VNSVISHPATMSHRTLSLEERKIVGITDSLLRLSVGI----EDVNDLIEDLDRALS 373 (376)
T ss_pred CceEEeCccccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHH
Confidence 111 15789999554 567778888877776
No 275
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.82 E-value=8.5e-19 Score=173.89 Aligned_cols=290 Identities=17% Similarity=0.158 Sum_probs=187.4
Q ss_pred CCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcc
Q 012138 112 RAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 191 (470)
Q Consensus 112 ~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~ 191 (470)
..+.++...+|++.++++.+.+.+++++||++|+..++..+.. +|+ .|++..++|.+.......+.....
T Consensus 46 ~R~~~p~~~~le~~lA~l~g~~~v~~~~gg~~Ai~~~l~all~---------~GD-~Vl~~~p~y~~~~~~~~~~~~~~~ 115 (382)
T TIGR02080 46 SRSGNPTRDLLQQALAELEGGAGAVVTNTGMSAIHLVTTALLG---------PDD-LLVAPHDCYGGTYRLLNALAKKGC 115 (382)
T ss_pred cCCCCchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHcC---------CCC-EEEEcCCCcHHHHHHHHHHHhhcC
Confidence 3456778899999999999888999999999999999987754 455 788888888543221111111111
Q ss_pred cccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCc
Q 012138 192 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 271 (470)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g 271 (470)
.. +...+..|++++++++++ ++++|+++.++||+|.+.+ +++|.++|+++|+++|+||+|..+.
T Consensus 116 ~~---------v~~~d~~d~~~l~~ai~~---~tklV~l~~p~NPtG~~~d----l~~I~~la~~~g~~vvvD~a~~~~~ 179 (382)
T TIGR02080 116 FR---------VLFVDQGDEQALRAALAQ---KPKLVLIETPSNPLLRVVD----IAKICHLAKAVGAVVVVDNTFLSPA 179 (382)
T ss_pred eE---------EEEECCCCHHHHHHhcCc---CceEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCcccc
Confidence 10 122223478999998875 7899998877999999998 9999999999999999999997321
Q ss_pred ccCCccccccCCCCccee--eccccccC--CCcceeEEEe-cHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhH
Q 012138 272 RSGRMLASDWEEVRPDMV--ILGKALGG--GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKL 346 (470)
Q Consensus 272 ~~G~~~~~~~~~~~pdi~--s~sK~l~g--G~~~ig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~ 346 (470)
.. .. .. .+ .|++ +++|.++| ++ ..|+++. ++++.+.+.......+...+|+.+..++..++.+.. .
T Consensus 180 ~~-~p--l~-~g--aDivv~S~sK~l~G~~~~-~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l~tl~~--R 250 (382)
T TIGR02080 180 LQ-NP--LA-LG--ADLVLHSCTKYLNGHSDV-IAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLRGLRTLVA--R 250 (382)
T ss_pred cC-Cc--hh-hC--CCEEEeecceeccCCCCc-eeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHcccchHHH--H
Confidence 11 11 11 22 3554 88899874 55 7888765 677777665433334556788888887766665533 2
Q ss_pred HHHHHHHHHHHHHHHHHHHh----hCCCceE---------EEeccceeEEEEeccCCCchhHHHHHHHHHHcCceec---
Q 012138 347 AERSAHLGEELRQHLFKIQQ----QFPNYVK---------EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK--- 410 (470)
Q Consensus 347 ~~~~~~~~~~l~~~L~~l~~----~~p~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~--- 410 (470)
+++..++...+.+.|++... .||.... ...+.|.++.+++.... ....+|.+.|.--.+.++
T Consensus 251 ~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~--~~~~~f~~~l~~~~~~~s~G~ 328 (382)
T TIGR02080 251 MRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGGE--QTVRRFLGGLSLFTLAESLGG 328 (382)
T ss_pred HHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCcH--HHHHHHHHcCCcceEeccCCC
Confidence 44555566666666654221 2221100 12356889999886321 234456655542111111
Q ss_pred -------cC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 411 -------PT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 411 -------~~-----------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
|. .++.|||+..+ |+.+++++-|.++|+
T Consensus 329 ~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl----E~~~dl~~dl~~al~ 380 (382)
T TIGR02080 329 VESLIAHPATMTHAAMGPEARAEAGISDTLLRLSVGL----EDADDLIADLEQGLR 380 (382)
T ss_pred CcceeECCCccCcccCCHHHHHhcCCCcCeEEEEecc----CCHHHHHHHHHHHHh
Confidence 11 14689999554 567778888877775
No 276
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.82 E-value=8.1e-19 Score=157.81 Aligned_cols=328 Identities=16% Similarity=0.174 Sum_probs=210.5
Q ss_pred EEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCC-CCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHh
Q 012138 77 YLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAF-YNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKW 155 (470)
Q Consensus 77 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~ 155 (470)
.+|+-|.....| -.+++++|.++.-. ...| ..+...+|+++.++++|.|.-+|+.|||.+|..+++.-..-
T Consensus 23 ~vDLRSDTvT~P----TdeMr~am~eA~vg----DdVyGeD~tt~rLE~~vA~l~GKEAgLFv~SGTmgNllaIm~Hc~~ 94 (384)
T KOG1368|consen 23 SVDLRSDTVTVP----TDEMRRAMAEASVG----DDVYGEDPTTNRLEQRVAELFGKEAGLFVPSGTMGNLLAIMVHCHQ 94 (384)
T ss_pred ccccccccccCC----hHHHHHHHhhcccC----cccccCCccHHHHHHHHHHHhCccceeeecccccccHHHHHHHhcC
Confidence 346666543332 35666666655422 1112 34456899999999999999999999999999999976651
Q ss_pred chhcccCCCCCcEEEE-EccCccccccchhcccCCcccccCCCCCCC-CeeeecCCCHHHHHHHHHhc-----CCCeEEE
Q 012138 156 GYVKKKFSIDEAIIVS-CCGCFHGRTLAAISMSCDNEAIRGFGPLLP-GHLKVDFGDITALEKIFKES-----GDQIAGF 228 (470)
Q Consensus 156 ~~~~~~~~~g~~~ii~-~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~Le~~l~~~-----~~~~~~v 228 (470)
+|. .||+ .....|-+..+.++.-+.-.. .++.+ +...+ |++++|+++... .+.+++|
T Consensus 95 --------rg~-eii~gd~~HI~~~E~gg~s~l~gv~~----~tv~~e~dgtm---~ledIe~~ir~~~GD~H~p~T~LI 158 (384)
T KOG1368|consen 95 --------RGS-EIIVGDRAHIHRYEQGGISQLAGVHV----RTVKNENDGTM---DLEDIEAAIRVPKGDCHMPPTKLI 158 (384)
T ss_pred --------CCc-eEEeccchheeehhccChhhhcccee----EeeeeCCCCee---eHHHHHHhhcCCCCCccCCCceEE
Confidence 344 4554 443334444444332211000 00000 11222 799999999743 2468999
Q ss_pred EEccccC-CCccccCChhhHHHHHHHHHhcCcEEEEeccccCC--cccCCccccccCCCCcce--eeccccccCCCccee
Q 012138 229 LFEPIQG-EAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL--ARSGRMLASDWEEVRPDM--VILGKALGGGVIPVS 303 (470)
Q Consensus 229 i~epi~n-~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~--g~~G~~~~~~~~~~~pdi--~s~sK~l~gG~~~ig 303 (470)
.+|..++ -+|.++ |.+|+.++.++|++||+.|.+|-+.-.= ...|- ..+.+.-..|- ++|||+++. |+|
T Consensus 159 clENT~~~~Gg~vl-Ple~~~~v~~lak~~glkLH~DGARi~NAavasgV--~vk~i~~~fDSVsiCLSKglgA---PVG 232 (384)
T KOG1368|consen 159 CLENTHNNCGGKVL-PLEELDRVKALAKRHGLKLHMDGARIFNAAVASGV--PVKKICSAFDSVSICLSKGLGA---PVG 232 (384)
T ss_pred EeeccccccCceEe-eHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCC--CHHHHHHhhhhhhhhhhccCCC---Ccc
Confidence 9988555 566888 9999999999999999999999765310 00111 11111112343 489999986 555
Q ss_pred E-EEecHHHHhhcCcC--CccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEe-ccc
Q 012138 304 A-VLADKEVMLCIQPG--EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR-GRG 379 (470)
Q Consensus 304 ~-v~~~~~~~~~~~~~--~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~-~~g 379 (470)
- ++++++++++.+.. ..++.+-.+.+.+++++.+|+.--. ..++-.+++..+.+.++... .+-..+. -+.
T Consensus 233 SViVG~k~FI~kA~~~RKalGGGmRQsGvLaaaaLval~~~~~--~L~~dHk~A~~lAe~~~~~~----~i~v~v~a~et 306 (384)
T KOG1368|consen 233 SVIVGSKDFIDKARHFRKALGGGMRQSGVLAAAALVALDENVP--LLRADHKRAKELAEYINTPE----EIRVEVPAVET 306 (384)
T ss_pred cEEEccHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhhcchH--HHHHHHHHHHHHHHHhcccc----ceeeecchhhc
Confidence 4 55899888765432 3455666677788888877763211 33344444555555554321 1122222 455
Q ss_pred eeEEEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHH-HHHh
Q 012138 380 LFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALH-DVLE 442 (470)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~-~~l~ 442 (470)
.|..+.+..+. .+++++++.+.+.||++.++....+|+.+...+|+++++..+..+. .++.
T Consensus 307 Niv~~~l~q~~--~~~~~l~~~~~k~gi~lm~~~s~r~Rivlh~Qvt~~~ve~~~~~~~k~~~~ 368 (384)
T KOG1368|consen 307 NIVNMVLCQAR--LTAEELCKFLEKNGILLMGGASRRIRIVLHHQVTDEDVEYVKSVLSKKFLK 368 (384)
T ss_pred ceeeeeccccc--CCHHHHHHHHHHCCeEEeeccccceEEEEEEecCHHHHHHHHHHHHHHHHh
Confidence 66666554443 5889999999999999998877889999999999999999999994 4555
No 277
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.82 E-value=2e-18 Score=170.62 Aligned_cols=289 Identities=9% Similarity=-0.005 Sum_probs=184.8
Q ss_pred CCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccc
Q 012138 114 FYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAI 193 (470)
Q Consensus 114 ~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 193 (470)
..++....|++.|+++.|.+.+++++||++|+..++..+.. +|+ .||+.++.|++.............
T Consensus 47 ~gnPt~~~lE~~lA~l~g~~~~~~~~sG~~Ai~~al~all~---------~GD-~Vl~~~~~y~~t~~~~~~~~~~~g-- 114 (377)
T TIGR01324 47 RGTLTHFALQDAMCELEGGAGCYLYPSGLAAVTNSILAFVK---------AGD-HVLMVDSAYEPTRYFCDIVLKRMG-- 114 (377)
T ss_pred CCCccHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhcC---------CCC-EEEEcCCCcHHHHHHHHHHHHhcC--
Confidence 45677899999999999999999999999999999987654 566 677778888764321100000000
Q ss_pred cCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCccc
Q 012138 194 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS 273 (470)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~ 273 (470)
..+..++.++.+++++++++ ++++|++|.+.||+|.+.+ +++|.++|++||+++|+|++|+. +..
T Consensus 115 -------i~v~~~d~~~~e~l~~~i~~---~tklV~lesp~Np~g~~~d----l~~I~~la~~~g~~livD~t~a~-g~~ 179 (377)
T TIGR01324 115 -------VDITYYDPLIGEDIATLIQP---NTKVLFLEAPSSITFEIQD----IPAIAKAARNPGIVIMIDNTWAA-GLL 179 (377)
T ss_pred -------cEEEEECCCCHHHHHHhcCC---CceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCCcc-ccc
Confidence 01223333344788888865 7999999999999999988 99999999999999999999982 212
Q ss_pred CCccccccCCCCccee--eccccccC--CCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHH
Q 012138 274 GRMLASDWEEVRPDMV--ILGKALGG--GVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAER 349 (470)
Q Consensus 274 G~~~~~~~~~~~pdi~--s~sK~l~g--G~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~ 349 (470)
.+. ..+| .|++ +++|.++| +. -.|+++++++.++.+...........+|..+......++.+. -.+++
T Consensus 180 ~~p---l~~g--aDivv~S~tK~l~G~~d~-~gG~v~~~~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~tl~--~R~~~ 251 (377)
T TIGR01324 180 FKP---LEHG--VDISIQAGTKYLVGHSDI-MIGTVVANARTWDQLREHSYLMGQMVDADDAYTTLRGLRTLG--VRLKQ 251 (377)
T ss_pred cCc---cccC--ceEEEecCceeccCCCCc-eEEEEEeCHHHHHHHHHHHHHhCCCCCHHHHHHHHhhhhhHH--HHHHH
Confidence 221 1233 4666 66899984 34 578888888877766532222233456766666666665442 23444
Q ss_pred HHHHHHHHHHHHHHHH----hhCCCce---------EEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccC----
Q 012138 350 SAHLGEELRQHLFKIQ----QQFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT---- 412 (470)
Q Consensus 350 ~~~~~~~l~~~L~~l~----~~~p~~~---------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---- 412 (470)
..+++..+.+.|++.. -.||... ....+.|.++.++++... .....+|.+.|+-.++.++-|
T Consensus 252 ~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~-~~~~~~~~~~l~~~~~~~slG~~~s 330 (377)
T TIGR01324 252 HQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLT-QKQVHAFLDHLQLFGLGYSWGGYES 330 (377)
T ss_pred HHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCC-HHHHHHHHHhCCcceEeccCCCccc
Confidence 4555555555555532 1222100 012356889999886311 135667777776543332111
Q ss_pred -------------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 413 -------------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 413 -------------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
.++.+||++.+ |+.+++++-|.++|+
T Consensus 331 l~~~~~~~~~~~~~~~~~~~~~liR~svGl----E~~~dl~~dl~~al~ 375 (377)
T TIGR01324 331 LALCNQPELGHRPNIKRNLEGPLIRVHIGL----ENVDDLKADLKAGFE 375 (377)
T ss_pred eeecCCCCCCHHHHHhccCCCCEEEEEeCC----CCHHHHHHHHHHHHh
Confidence 13578998554 567777777777776
No 278
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.82 E-value=2.9e-18 Score=170.22 Aligned_cols=290 Identities=17% Similarity=0.150 Sum_probs=185.5
Q ss_pred CCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcc
Q 012138 112 RAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 191 (470)
Q Consensus 112 ~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~ 191 (470)
..+.++...+|+++|+++.+.+.+++++||++|+..++..+.. +|+ .|++.++.|++.......+.....
T Consensus 47 ~R~~~pt~~~L~~~lA~l~g~~~~i~~~sg~~Ai~~~l~~l~~---------~GD-~Vl~~~~~y~~~~~~~~~~~~~~g 116 (386)
T PRK08045 47 SRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFLK---------PGD-LLVAPHDCYGGSYRLFDSLAKRGC 116 (386)
T ss_pred eCCCCccHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHcC---------CCC-EEEEcCCCcHHHHHHHHHHHhhCC
Confidence 3456778899999999999888899999999999999986654 465 788888888653321111110000
Q ss_pred cccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCc
Q 012138 192 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 271 (470)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g 271 (470)
. .+..++..|++++++++++ ++++|+++.++||+|.+.+ +++|.++|+++|+++|+||+|....
T Consensus 117 i---------~v~~vd~~d~e~l~~~l~~---~tklV~l~sP~NPtG~v~d----i~~I~~ia~~~g~~vivDeay~~~~ 180 (386)
T PRK08045 117 Y---------RVLFVDQGDEQALRAALAE---KPKLVLVESPSNPLLRVVD----IAKICHLAREAGAVSVVDNTFLSPA 180 (386)
T ss_pred e---------EEEEeCCCCHHHHHHhccc---CCeEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCCccc
Confidence 0 0122223478999998875 7889998888999999998 9999999999999999999997321
Q ss_pred ccCCccccccCCCCccee--eccccccC--CCcceeEEEe-cHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhH
Q 012138 272 RSGRMLASDWEEVRPDMV--ILGKALGG--GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKL 346 (470)
Q Consensus 272 ~~G~~~~~~~~~~~pdi~--s~sK~l~g--G~~~ig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~ 346 (470)
. .... .++. |++ +++|.++| +. ..|++++ ++++.+.+.......+...+|+.+..+...|+.+.. .
T Consensus 181 ~-~~pl---~~ga--Divv~S~tK~l~G~~d~-~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~tl~~--R 251 (386)
T PRK08045 181 L-QNPL---ALGA--DLVLHSCTKYLNGHSDV-VAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRTLVP--R 251 (386)
T ss_pred c-CCch---hhCC--CEEEeecceeccCCCCc-eeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhccHHH--H
Confidence 1 1111 1233 554 78899984 44 6788776 577766664333333445788888887777765432 3
Q ss_pred HHHHHHHHHHHHHHHHHHHh----hCCCce---------EEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceec---
Q 012138 347 AERSAHLGEELRQHLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK--- 410 (470)
Q Consensus 347 ~~~~~~~~~~l~~~L~~l~~----~~p~~~---------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~--- 410 (470)
+++..+++..+.+.|++... .||... ....+.|.++.++++.+. ....+|++.|.--.+.++
T Consensus 252 ~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~--~~~~~f~~~l~~~~~~~s~G~ 329 (386)
T PRK08045 252 MELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDE--QTLRRFLGGLSLFTLAESLGG 329 (386)
T ss_pred HHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcH--HHHHHHHHhccceeEeccCCC
Confidence 34455555555555554211 122110 012366889999886421 234566666642211111
Q ss_pred -------cC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 411 -------PT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 411 -------~~-----------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
|. .++.|||++.+ |+.+++++-|.++|+
T Consensus 330 ~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 381 (386)
T PRK08045 330 VESLISHAATMTHAGMAPEARAAAGISETLLRISTGI----EDGEDLIADLENGFR 381 (386)
T ss_pred CceeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHH
Confidence 11 15789999655 556667777776666
No 279
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.82 E-value=9.5e-19 Score=173.13 Aligned_cols=294 Identities=14% Similarity=0.121 Sum_probs=184.4
Q ss_pred CCCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCc
Q 012138 111 SRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDN 190 (470)
Q Consensus 111 ~~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~ 190 (470)
+..+.++....|++.|+++.|.+.+++++||++|+..++..+.. +|+ .|++..++|.+............
T Consensus 47 Y~R~~npt~~~Le~~lA~leg~e~ivvt~gg~~Ai~~~l~all~---------~Gd-~Il~~~~~y~~~~~~~~~~~~~~ 116 (388)
T PRK08861 47 YTRSGNPNRGLLEQTLSELESGKGAVVTNCGTSALNLWVSALLG---------PDD-LIVAPHDCYGGTYRLFNTRANKG 116 (388)
T ss_pred ccCCCCchHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHcC---------CCC-EEEEcCCchHHHHHHHHHHHhcC
Confidence 33456778899999999999999999999999999999987654 455 77777888754321110110000
Q ss_pred ccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-C
Q 012138 191 EAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G 269 (470)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g 269 (470)
.. .+..++..|++++++++++ ++++|+++.++||+|.+.+ +++|.++|+++|+++|+||+|. +
T Consensus 117 gi---------~v~~vd~~d~e~l~~~i~~---~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~vIvDea~~~~ 180 (388)
T PRK08861 117 DF---------KVQFVDQSDAAALDAALAK---KPKLILLETPSNPLVRVVD----IAELCQKAKAVGALVAVDNTFLTP 180 (388)
T ss_pred Ce---------EEEEECCCCHHHHHHhcCc---CCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCcccc
Confidence 01 1233444588999988875 7899998887999999998 9999999999999999999997 2
Q ss_pred CcccCCccccccCCCCccee--eccccccC--CCcceeEEEe-cHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhh
Q 012138 270 LARSGRMLASDWEEVRPDMV--ILGKALGG--GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE 344 (470)
Q Consensus 270 ~g~~G~~~~~~~~~~~pdi~--s~sK~l~g--G~~~ig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~ 344 (470)
+.. .. .....|++ +++|.++| +. ..|++++ ++++.+.++..........+|..+..+...|+.+.-
T Consensus 181 ~~~--~p-----l~~GaDivv~S~tK~l~G~~d~-~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~Tl~l- 251 (388)
T PRK08861 181 VLQ--KP-----LELGADFVIHSTTKYINGHSDV-IGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRGIRTLGA- 251 (388)
T ss_pred ccC--CC-----cccCCCEEEeecceeccCCCcc-eeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHHHhcCCCHHH-
Confidence 211 11 12234655 67799985 33 5677776 456666554322222334677777766655554322
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh----hCCCce---------EEEeccceeEEEEeccCCCchhHHHHHHHHHH--cCcee
Q 012138 345 KLAERSAHLGEELRQHLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKE--RGILA 409 (470)
Q Consensus 345 ~~~~~~~~~~~~l~~~L~~l~~----~~p~~~---------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~--~Gv~~ 409 (470)
..++..+++..+.+.|++... .||... ....+.|.++.+++..+. ....+|++.|.- .++..
T Consensus 252 -R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~--~~~~~f~~~l~l~~~~~s~ 328 (388)
T PRK08861 252 -RMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSF--EQLKVFVKALALFSLAESL 328 (388)
T ss_pred -HHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCCH--HHHHHHHhcCCcceEccCC
Confidence 233444444555555554211 222110 112466889999886321 244556655532 12111
Q ss_pred c--------cC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccCC
Q 012138 410 K--------PT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 447 (470)
Q Consensus 410 ~--------~~-----------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~ 447 (470)
. |. .++.|||++.+ |+++.+++-|+++|+ .+.+
T Consensus 329 G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----E~~~dli~Dl~~al~-~~~~ 386 (388)
T PRK08861 329 GGVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVGL----EDAQDLIADLDQAFA-KAAE 386 (388)
T ss_pred CCCcceeeCCCcccccccCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHH-HHHh
Confidence 1 11 15689999554 567777777777777 5543
No 280
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.82 E-value=2.1e-18 Score=172.19 Aligned_cols=289 Identities=16% Similarity=0.138 Sum_probs=184.2
Q ss_pred CCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCccc
Q 012138 113 AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEA 192 (470)
Q Consensus 113 ~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~ 192 (470)
.+.++...+|+++|+++.|.+..++++||++|+..++..+.. +|+ .|++..+.|++.............
T Consensus 56 R~~~p~~~~Le~~lA~l~g~~~~v~~~sG~~Ai~~~l~all~---------pGD-~Vvv~~p~Y~~t~~~~~~~~~~~g- 124 (405)
T PRK08776 56 RSGNPTRDLLGEALAELEGGAGGVITATGMGAINLVLNALLQ---------PGD-TLVVPHDAYGGSWRLFNALAKKGH- 124 (405)
T ss_pred CCCChHHHHHHHHHHHHhCCCceEEEcCHHHHHHHHHHHHhC---------CCC-EEEEccCCchHHHHHHHHHHHhcC-
Confidence 355667789999999998887788889999999988887754 566 677788888653211111000000
Q ss_pred ccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcc
Q 012138 193 IRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR 272 (470)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~ 272 (470)
..+..++..|+++|++++++ ++++|+++.++||+|.+.+ +++|.++|++||+++|+||+|.....
T Consensus 125 --------~~v~~v~~~d~~~l~~~i~~---~tklV~l~~P~NPtG~v~d----l~~I~~la~~~gi~vIvD~a~a~~~~ 189 (405)
T PRK08776 125 --------FALITADLTDPRSLADALAQ---SPKLVLIETPSNPLLRITD----LRFVIEAAHKVGALTVVDNTFLSPAL 189 (405)
T ss_pred --------cEEEEECCCCHHHHHHhcCc---CCeEEEEECCCCCCCccCC----HHHHHHHHHHcCCEEEEECCCccccc
Confidence 11344555589999998865 7888887777999999987 99999999999999999999973211
Q ss_pred cCCccccccCCCCccee--eccccccC--CCcceeEEEe-cHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHH
Q 012138 273 SGRMLASDWEEVRPDMV--ILGKALGG--GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLA 347 (470)
Q Consensus 273 ~G~~~~~~~~~~~pdi~--s~sK~l~g--G~~~ig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~ 347 (470)
. .. .+ ++ .|++ +.+|.++| +. ..|+++. ++++.+.+........+..+++.+.++...++.++. ..
T Consensus 190 ~-~p--l~-~g--aDivv~S~tK~l~g~~~~-~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl~tl~~--r~ 260 (405)
T PRK08776 190 Q-KP--LE-FG--ADLVLHSTTKYINGHSDV-VGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRGLRTLDA--RL 260 (405)
T ss_pred C-Cc--cc-cc--CCEEEecCceeecCCCCc-eEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhCcHHH--HH
Confidence 1 11 11 23 3555 66799974 44 5777765 577777664332333345788888888777766533 55
Q ss_pred HHHHHHHHHHHHHHHHHHh----hCCCce---------EEEeccceeEEEEeccCCCchhHHHHHHHHHHc--Ccee---
Q 012138 348 ERSAHLGEELRQHLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKER--GILA--- 409 (470)
Q Consensus 348 ~~~~~~~~~l~~~L~~l~~----~~p~~~---------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~--Gv~~--- 409 (470)
++..++...+.+.|++... .||... ....+.|.++.+++.... ....+|++.|.-- +...
T Consensus 261 ~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~--~~~~~f~~~l~l~~~~~s~G~~ 338 (405)
T PRK08776 261 RVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGGE--AAVRAFVDGLRYFTLAESLGGV 338 (405)
T ss_pred HHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCCH--HHHHHHHHhCCcceEccCCCCC
Confidence 5666666666666665321 122110 012466889999886321 2345666655421 2111
Q ss_pred -----ccC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 410 -----KPT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 410 -----~~~-----------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
.|. .++.|||++.+ |+.+.+++-|+++|+
T Consensus 339 ~sl~~~p~~~~h~~~~~~~~~~~gi~~~liR~svGl----E~~~dli~dl~~al~ 389 (405)
T PRK08776 339 ESLIAHPASMTHAAMTAEARAAAGISDGLLRLSVGI----ESAEDLLIDLRAGLA 389 (405)
T ss_pred ceEEECCcccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHH
Confidence 111 15689999655 456666666666665
No 281
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.82 E-value=1.2e-18 Score=172.97 Aligned_cols=289 Identities=13% Similarity=0.089 Sum_probs=182.0
Q ss_pred CCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCccc
Q 012138 113 AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEA 192 (470)
Q Consensus 113 ~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~ 192 (470)
.+.++...++++.++++.|.+.+++++||++|+..++..+.. +|+ .|++..+.|++.......+ .....
T Consensus 49 r~~np~~~~lE~~lA~l~g~~~~l~~~sG~~Ai~~~l~~ll~---------~GD-~Vlv~~~~y~~~~~~~~~~-~~~g~ 117 (385)
T PRK08574 49 REENPTLRPLEEALAKLEGGVDALAFNSGMAAISTLFFSLLK---------AGD-RVVLPMEAYGTTLRLLKSL-EKFGV 117 (385)
T ss_pred CCCCccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhC---------CCC-EEEEcCCCchhHHHHHHHh-hccCc
Confidence 345778899999999999999999999999999999886654 566 6777788865432221111 10000
Q ss_pred ccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-CCc
Q 012138 193 IRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLA 271 (470)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g~g 271 (470)
.+..+ ..|++++++++++. ++++|++|.++||+|.+++ +++|.++|++||+++|+|++|+ ++.
T Consensus 118 ---------~v~~~-~~d~~~l~~~i~~~--~tklV~ie~p~NPtG~v~d----l~~I~~la~~~gi~livD~t~a~~~~ 181 (385)
T PRK08574 118 ---------KVVLA-YPSTEDIIEAIKEG--RTKLVFIETMTNPTLKVID----VPEVAKAAKELGAILVVDNTFATPLL 181 (385)
T ss_pred ---------EEEEE-CCCHHHHHHhcCcc--CceEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCCcccc
Confidence 01111 12788999888653 6889999999999999998 9999999999999999999996 332
Q ss_pred ccCCccccccCCCCcceeeccccccC-CCcc-eeEEE-ecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHH
Q 012138 272 RSGRMLASDWEEVRPDMVILGKALGG-GVIP-VSAVL-ADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAE 348 (470)
Q Consensus 272 ~~G~~~~~~~~~~~pdi~s~sK~l~g-G~~~-ig~v~-~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~ 348 (470)
.. . . ..|.+.-+.+++|.++| |- . .|+++ .++++.+.++..........+|+.++.+...|+.+.. ..+
T Consensus 182 ~~--~--l-~~GaDivv~S~sK~l~g~~d-~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~tL~~--R~~ 253 (385)
T PRK08574 182 YR--P--L-RHGADFVVHSLTKYIAGHND-VVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLVLRGLKTLEV--RFE 253 (385)
T ss_pred CC--h--h-hhCCcEEEeeCceeecCCCC-ceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcHHH--HHH
Confidence 11 1 1 13332233478899985 43 3 35344 5677777665332223344677777777776665532 444
Q ss_pred HHHHHHHHHHHHHHHHHh----hCCCceEE---------E--eccceeEEEEeccCCCchhHHHHHHHHHHc--Cceec-
Q 012138 349 RSAHLGEELRQHLFKIQQ----QFPNYVKE---------V--RGRGLFNAVEFDKTALPVSAYDICLKMKER--GILAK- 410 (470)
Q Consensus 349 ~~~~~~~~l~~~L~~l~~----~~p~~~~~---------~--~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~--Gv~~~- 410 (470)
+..++..++.+.|+.... .||..... . .+.|.++.+++.... ....+|++.|.-- +....
T Consensus 254 ~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~~~--~~~~~~~~~l~l~~~~~s~G~ 331 (385)
T PRK08574 254 RQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKGGR--DAVLKFLRSLKLIKPSPSLGG 331 (385)
T ss_pred HHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCCCH--HHHHHHHHcCCcceEccCCCC
Confidence 555566666666654321 22211111 1 246889999885321 2455666655321 21111
Q ss_pred -------cC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 411 -------PT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 411 -------~~-----------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
|. .++.|||+..+ |+.+.+++-|.++++
T Consensus 332 ~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dli~dl~~al~ 383 (385)
T PRK08574 332 VESLATYPVKSAASPIPEEDRKALGITEDLVRLSVGL----EDVEDLIEDLDQALG 383 (385)
T ss_pred CcceeeCCCcCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHh
Confidence 11 14689999554 567777877777776
No 282
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.81 E-value=2.2e-18 Score=169.75 Aligned_cols=282 Identities=17% Similarity=0.152 Sum_probs=182.0
Q ss_pred CCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcc
Q 012138 112 RAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 191 (470)
Q Consensus 112 ~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~ 191 (470)
..+.++...+|++.++++.+.+.++.++||++|+.+++. +.+ +|+ .||+..+.|++.. ..+......
T Consensus 49 ~R~~~p~~~~le~~lA~leg~~~~v~~~sG~aAi~~~l~-~l~---------~GD-~VI~~~~~yg~~~-~~~~~~~~~- 115 (364)
T PRK07269 49 TRTKNPTRAKLEETLAAIESADYALATSSGMSAIVLAFS-VFP---------VGS-KVVAVRDLYGGSF-RWFNQQEKE- 115 (364)
T ss_pred eCCCCccHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHH-HhC---------CCC-EEEEecCCcCchH-HHHHHHHhc-
Confidence 345677889999999999999999999999999999885 333 566 6666777765432 221111000
Q ss_pred cccCCCCCCCCeeeec-CCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCC
Q 012138 192 AIRGFGPLLPGHLKVD-FGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 270 (470)
Q Consensus 192 ~~~~~~~~~~~~~~~~-~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~ 270 (470)
. + ..+. ..|++++++++++ ++++|++|.++||+|.+.+ +++|.++|+++|+++|+|+++...
T Consensus 116 ~---------~-~~~~~~~d~~~l~~~i~~---~TklV~lesP~NPtg~~~d----i~~I~~la~~~gi~vvvD~t~~~~ 178 (364)
T PRK07269 116 G---------R-FHFTYANTEEELIAAIEE---DTDIVYIETPTNPLMVEFD----IEKVAKLAHAKGAKVIVDNTFYSP 178 (364)
T ss_pred C---------c-EEEEecCCHHHHHHhcCc---CceEEEEECCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCccc
Confidence 0 0 1111 1279999999975 7899998888999999998 999999999999999999997521
Q ss_pred cccCCccccccCCCCccee--eccccccC-CCcceeEEEe-cHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhH
Q 012138 271 ARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKL 346 (470)
Q Consensus 271 g~~G~~~~~~~~~~~pdi~--s~sK~l~g-G~~~ig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~ 346 (470)
..+ ...+...|++ |++|.++| |=.-.|+++. ++++.+.++..........+|+.++.+...|+.+. ..
T Consensus 179 -~~~-----~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~tL~--~r 250 (364)
T PRK07269 179 -IYQ-----RPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRGLKTLS--LR 250 (364)
T ss_pred -ccC-----CchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCcHH--HH
Confidence 011 1123344666 56698875 2102456665 56777766432212234578888888877776553 34
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCceEEE-eccceeEEEEeccCCCchhHHHHHHHHHHc----------CceeccC---
Q 012138 347 AERSAHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDICLKMKER----------GILAKPT--- 412 (470)
Q Consensus 347 ~~~~~~~~~~l~~~L~~l~~~~p~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~----------Gv~~~~~--- 412 (470)
.++.+++...+.+.|++ +|...... ++.|.++.+.+... ....+|.+.+.-- ++++.|.
T Consensus 251 ~~~~~~na~~~a~~L~~----~p~v~~v~ypg~gg~~sf~~~~~---~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~ 323 (364)
T PRK07269 251 MERSTANAQEVVAFLKK----SPAVKEVLYTGKGGMISFKVADE---TRIPHILNSLKVFTFAESLGGVESLITYPTTQT 323 (364)
T ss_pred HHHHHHHHHHHHHHHHh----CCCccEEeCCCcCcEEEEEECCH---HHHHHHHHhCCcceEccCCCCcCeEeeCCcccc
Confidence 55556666666666654 33222222 57888999987531 2344555544311 2233231
Q ss_pred --------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 413 --------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 413 --------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
.++.|||++.+ |+++.+++-|.++|+
T Consensus 324 ~~~~~~~~r~~~Gi~~~liRlsvGl----E~~~dli~dl~~al~ 363 (364)
T PRK07269 324 HADIPAEVRHSYGLTDDLLRLSIGI----EDARDLIADLKQALE 363 (364)
T ss_pred cccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHhc
Confidence 15789999554 567778888877764
No 283
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.81 E-value=1.8e-17 Score=159.59 Aligned_cols=320 Identities=18% Similarity=0.220 Sum_probs=216.3
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCC---eEEecCChhHHHHHHHHHHHHhchhcccCCCCCcE
Q 012138 92 CHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYD---MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAI 168 (470)
Q Consensus 92 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~---~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ 168 (470)
.+|+|++++.+..-. +-+.. ......++.+.|...++.+ .++++.||+.|+|+++..+.. ||+++
T Consensus 16 v~~~V~~am~~~~~~--h~s~~-F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~---------pgdkV 83 (383)
T COG0075 16 VPPRVLLAMARPMVG--HRSPD-FVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVE---------PGDKV 83 (383)
T ss_pred CCHHHHHHhcCCCCC--CCCHH-HHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccC---------CCCeE
Confidence 568888887665422 21111 2344567777777777644 477889999999999997765 67866
Q ss_pred EEEEccCccccccchhcccCCccc--ccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhh
Q 012138 169 IVSCCGCFHGRTLAAISMSCDNEA--IRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY 246 (470)
Q Consensus 169 ii~~~~~yhg~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~ 246 (470)
+++..+.|-.+........+.+.. ...+ ...+ |+++++++|++. +++++|.+.+.-.+||...|
T Consensus 84 Lv~~nG~FG~R~~~ia~~~g~~v~~~~~~w------g~~v---~p~~v~~~L~~~-~~~~~V~~vH~ETSTGvlnp---- 149 (383)
T COG0075 84 LVVVNGKFGERFAEIAERYGAEVVVLEVEW------GEAV---DPEEVEEALDKD-PDIKAVAVVHNETSTGVLNP---- 149 (383)
T ss_pred EEEeCChHHHHHHHHHHHhCCceEEEeCCC------CCCC---CHHHHHHHHhcC-CCccEEEEEeccCcccccCc----
Confidence 666777763332222222211111 0000 0122 899999999954 35666766665678999999
Q ss_pred HHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcCC-------
Q 012138 247 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE------- 319 (470)
Q Consensus 247 l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~------- 319 (470)
+++|.++|++||+++|+|.|-+ + .|..+..+.|+++.-+..--|++++.- .+|.+..+++..+.+....
T Consensus 150 l~~I~~~~k~~g~l~iVDaVsS-~--Gg~~~~vd~wgiDv~itgSQK~l~~PP-Gla~v~~S~~a~e~~~~~~~~~~ylD 225 (383)
T COG0075 150 LKEIAKAAKEHGALLIVDAVSS-L--GGEPLKVDEWGIDVAITGSQKALGAPP-GLAFVAVSERALEAIEERKHPSFYLD 225 (383)
T ss_pred HHHHHHHHHHcCCEEEEEeccc-C--CCcccchhhcCccEEEecCchhccCCC-ccceeEECHHHHHHHhcCCCCceeec
Confidence 9999999999999999999977 3 344556777887432334449999654 6678888888777664321
Q ss_pred -----------ccCCCCCCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEE
Q 012138 320 -----------HGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE 385 (470)
Q Consensus 320 -----------~~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~ 385 (470)
..+.|+.+.....+..++|+.+.+ ++..++.+++++.+++++++++.+. +...-.....+..+.
T Consensus 226 L~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~--~~~~~~~s~tvta~~ 303 (383)
T COG0075 226 LKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLEL--FADPERRSPTVTAIK 303 (383)
T ss_pred HHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCcc--ccCcccCCCceEEEE
Confidence 244556777788888899998876 4566777888888999998876542 221112233444554
Q ss_pred eccCCCchhHHHHHHHHHHc-CceeccCC----CCEEEEecCCCCCHHHHHHHHHHHHHHHhcccCC
Q 012138 386 FDKTALPVSAYDICLKMKER-GILAKPTH----DTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 447 (470)
Q Consensus 386 ~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~----~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~ 447 (470)
++... +..++...++++ |+.+.++. +..+||...-..+.+++..++.+|+.+|. ++..
T Consensus 304 ~P~g~---~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~-~~g~ 366 (383)
T COG0075 304 VPEGV---DDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALR-ELGV 366 (383)
T ss_pred CCCCC---CcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHH-HcCC
Confidence 44432 444444466666 99988663 67999988778999999999999999999 7654
No 284
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.81 E-value=2.7e-18 Score=172.23 Aligned_cols=289 Identities=17% Similarity=0.207 Sum_probs=184.0
Q ss_pred CCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCccc
Q 012138 113 AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEA 192 (470)
Q Consensus 113 ~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~ 192 (470)
...++...+|++.|+++.|.+.+++++||++|+..++..+.. +|+ .|++..+.|++... ...... +
T Consensus 54 r~~~pt~~~Le~~lA~l~g~~~~l~~ssG~~Ai~~al~al~~---------~Gd-~Vl~~~~~Y~~t~~-~~~~~l-~-- 119 (425)
T PRK06084 54 RIMNPTNDVLEQRVAALEGGVGALAVASGMAAITYAIQTIAE---------AGD-NIVSVAKLYGGTYN-LLAHTL-P-- 119 (425)
T ss_pred CCCCchHHHHHHHHHHHhCCCceeEehhHHHHHHHHHHHHhC---------CCC-EEEEeCCCcchHHH-HHHHhc-c--
Confidence 345677889999999999988899999999999999987765 455 67788888875332 221100 0
Q ss_pred ccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcc
Q 012138 193 IRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR 272 (470)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~ 272 (470)
.....+..++.+|++++++++++ ++++|+++.++||+|.+.+ +++|.++|++||+++|+|++|+. +.
T Consensus 120 -----~~gi~v~~~d~~d~e~le~ai~~---~tklV~lesp~NPtG~v~d----l~~I~~la~~~~i~vVvD~a~a~-~~ 186 (425)
T PRK06084 120 -----RIGIETRFAAHDDIAALEALIDE---RTKAVFCESIGNPAGNIID----IQALADAAHRHGVPLIVDNTVAT-PV 186 (425)
T ss_pred -----cceeEEEEECCCCHHHHHHHhcc---CCcEEEEeCCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCcc-cc
Confidence 00011334555689999999976 7899999988999999998 99999999999999999999972 11
Q ss_pred cCCccccccCCCCccee--eccccccC-CCcceeEEEec-HHHH--h---h---cCc-----------------------
Q 012138 273 SGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLAD-KEVM--L---C---IQP----------------------- 317 (470)
Q Consensus 273 ~G~~~~~~~~~~~pdi~--s~sK~l~g-G~~~ig~v~~~-~~~~--~---~---~~~----------------------- 317 (470)
.. .......|++ +++|.++| |. ++|.+++. +.+. + . +..
T Consensus 187 ~~-----~p~~~gaDivv~S~tK~l~G~g~-~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 260 (425)
T PRK06084 187 LC-----RPFEHGADIVVHSLTKYIGGHGT-SIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRC 260 (425)
T ss_pred cC-----ChhhcCCCEEEECchhccccccc-ceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHH
Confidence 11 1112234655 78899985 55 67766653 2210 0 0 000
Q ss_pred ---CCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh----hCCCce---------EEEec-cce
Q 012138 318 ---GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYV---------KEVRG-RGL 380 (470)
Q Consensus 318 ---~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~----~~p~~~---------~~~~~-~g~ 380 (470)
...+.....+|..++.+...|+.+. ...++..+++.++.+.|++... .||... ....+ .|.
T Consensus 261 ~~~~~~~~g~~l~~~~a~l~lrgl~tl~--~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~~gg 338 (425)
T PRK06084 261 RVVPLRNMGAALSPFNAFLILQGLETLA--LRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHELARRYMGGKPAS 338 (425)
T ss_pred HHHHHHhcCCCCCHHHHHHHHcCcCcHH--HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHHHHHhCCCCcce
Confidence 0112233467777777766665543 3555666667777777776432 222111 11224 578
Q ss_pred eEEEEeccCCCchhHHHHHHHHHHcCc--ee--------ccC-----------------CCCEEEEecCCCCCHHHHHHH
Q 012138 381 FNAVEFDKTALPVSAYDICLKMKERGI--LA--------KPT-----------------HDTIVRLTPPLSISSNELQEG 433 (470)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv--~~--------~~~-----------------~~~~iR~~~~~~~t~e~i~~~ 433 (470)
++.+++..+. ....+|.+.|.--.+ .. .|. .++.|||++.+ |+.+.+
T Consensus 339 ~~s~~~~~~~--~~~~~f~~~l~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~liR~svGl----Ed~~dL 412 (425)
T PRK06084 339 ILSFGIKGGQ--AAGARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDMVRLSIGI----EHIDDI 412 (425)
T ss_pred EEEEEecCCH--HHHHHHHHhCCcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHH
Confidence 8999886432 234566666542221 11 111 15789999554 667778
Q ss_pred HHHHHHHHh
Q 012138 434 SKALHDVLE 442 (470)
Q Consensus 434 ~~~l~~~l~ 442 (470)
++-|.++|+
T Consensus 413 i~dl~~Al~ 421 (425)
T PRK06084 413 IADLAQALD 421 (425)
T ss_pred HHHHHHHHH
Confidence 888887776
No 285
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.81 E-value=6.8e-18 Score=168.77 Aligned_cols=289 Identities=17% Similarity=0.225 Sum_probs=184.5
Q ss_pred CCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCccc
Q 012138 113 AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEA 192 (470)
Q Consensus 113 ~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~ 192 (470)
.+.++...++++.++++.|.+..+.++||+.|+..++..+.. +|+ .||+..+.| +.+.........
T Consensus 61 r~~~p~~~~le~~lA~l~g~~~~i~~~sG~~Al~~~l~~ll~---------~Gd-~Viv~~~~y-~~t~~~~~~~~~--- 126 (403)
T PRK07503 61 RISNPTLALLEQRMASLEGGEAAVALASGMGAITATLWTLLR---------PGD-EVIVDQTLY-GCTFAFLHHGLG--- 126 (403)
T ss_pred CCCCchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHcC---------CCC-EEEEccCcc-chHHHHHHHHHh---
Confidence 355677899999999999988889999999999999886543 566 666666665 433222110000
Q ss_pred ccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcc
Q 012138 193 IRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR 272 (470)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~ 272 (470)
.....+..++..|++++++++++ ++++|+++.++||+|.+.+ +++|.++|++||+++|+|++|+.. .
T Consensus 127 -----~~G~~v~~vd~~d~~~l~~~i~~---~tklV~le~p~NPtG~~~d----i~~I~~la~~~gi~lIvD~a~a~~-~ 193 (403)
T PRK07503 127 -----EFGVTVRHVDLTDPAALKAAISD---KTRMVYFETPANPNMRLVD----IAAVAEIAHGAGAKVVVDNTYCTP-Y 193 (403)
T ss_pred -----hCCEEEEEeCCCCHHHHHHhcCc---cCcEEEEeCCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCccc-c
Confidence 00011345555689999998875 7899998888999999998 999999999999999999999732 1
Q ss_pred cCCccccccCCCCccee--eccccccC-C-CcceeEEEecHHHHhhcCcC--CccCCCCCCHHHHHHHHHHHHHHhhhhH
Q 012138 273 SGRMLASDWEEVRPDMV--ILGKALGG-G-VIPVSAVLADKEVMLCIQPG--EHGSTFGGNPLASAVAIASLDVIRDEKL 346 (470)
Q Consensus 273 ~G~~~~~~~~~~~pdi~--s~sK~l~g-G-~~~ig~v~~~~~~~~~~~~~--~~~~t~~~~~~~~aaa~a~l~~~~~~~~ 346 (470)
.+... +...|++ +++|.++| | . +.|+++.++++++.++.. ........+++.++.+...|+.+.. .
T Consensus 194 ~~~~l-----~~g~Di~v~S~tK~l~g~gd~-~gG~v~~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~tl~~--r 265 (403)
T PRK07503 194 LQRPL-----ELGADLVVHSATKYLGGHGDI-TAGLVVGGKALADRIRLEGLKDMTGAVMSPFDAFLLMRGLKTLAL--R 265 (403)
T ss_pred cCCch-----hhCCCEEEccccccccCCCce-eEEEEEcCHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcchHHH--H
Confidence 22221 2233554 78899995 4 5 788899889888877532 2222355788888888777765532 3
Q ss_pred HHHHHHHHHHHHHHHHHHHh----hCCCce---------EEEeccceeEEEEeccCCCchhHHHHHHHHHH--cCceec-
Q 012138 347 AERSAHLGEELRQHLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKE--RGILAK- 410 (470)
Q Consensus 347 ~~~~~~~~~~l~~~L~~l~~----~~p~~~---------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~--~Gv~~~- 410 (470)
.++..++...+.+.|++... .||... ....+.|.++.+++.... .....+.+.|.- .+....
T Consensus 266 ~~~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~--~~~~~~~~~l~l~~~~~slG~ 343 (403)
T PRK07503 266 MDRHCASAQAVAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKGGI--AAGRRFMNALQLFARAVSLGD 343 (403)
T ss_pred HHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECCCH--HHHHHHHHhCCcceeecccCC
Confidence 34444556666666655321 122110 011245778888775321 233445544331 221110
Q ss_pred -------cC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 411 -------PT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 411 -------~~-----------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
|. .++.|||++.+ |+++++++-|.++|+
T Consensus 344 ~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~Al~ 395 (403)
T PRK07503 344 AESLAQHPASMTHSTYTPEERAEHGISEGLVRLSVGL----EDVADILADLAQALD 395 (403)
T ss_pred CCccCcCCCCCccccCCHHHHHhcCCCCCeEEEEEec----CCHHHHHHHHHHHHH
Confidence 10 14689999655 556667777766666
No 286
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=5e-18 Score=169.12 Aligned_cols=294 Identities=15% Similarity=0.092 Sum_probs=178.4
Q ss_pred CCCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCc
Q 012138 111 SRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDN 190 (470)
Q Consensus 111 ~~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~ 190 (470)
+..+.++...+|++.++++.|.+.+++++||++|+..++..+.+ +|+ .||+..+.|.+............
T Consensus 59 Y~r~~~pt~~~Le~~lA~l~g~~~~l~~~sgt~Ai~~~l~al~~---------~GD-~Vl~~~~~y~~~~~~~~~~~~~~ 128 (394)
T PRK07050 59 YGLHATPTSLALAQRLAEIEGGRHALLQPSGLAAISLVYFGLVK---------AGD-DVLIPDNAYGPNRDHGEWLARDF 128 (394)
T ss_pred cCCCCCHHHHHHHHHHHHHhCCCeEEEeccHHHHHHHHHHHHhC---------CCC-EEEEecCCcccHHHHHHHHHHhc
Confidence 33456677899999999999999999999999999999987754 566 78888888754331110000000
Q ss_pred ccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCC
Q 012138 191 EAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 270 (470)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~ 270 (470)
. ..+..++..+.+++++++++ ++++|++|.++||+|.+.+ +++|.++|+++|+++|+|++|+.
T Consensus 129 G---------i~v~~vd~~~~~~l~~~i~~---~tklV~le~p~Np~~~~~d----i~~I~~ia~~~gi~livD~a~a~- 191 (394)
T PRK07050 129 G---------ITVRFYDPLIGAGIADLIQP---NTRLIWLEAPGSVTMEVPD----VPAITAAARARGVVTAIDNTYSA- 191 (394)
T ss_pred C---------eEEEEECCCCHHHHHHhcCC---CCeEEEEECCCCCCccHhh----HHHHHHHHHHcCCEEEEECCccc-
Confidence 0 11233433356788888865 7899998888999998776 99999999999999999999972
Q ss_pred cccCCccccccCCCCccee--eccccccCCC-cceeEEEe-cHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhH
Q 012138 271 ARSGRMLASDWEEVRPDMV--ILGKALGGGV-IPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKL 346 (470)
Q Consensus 271 g~~G~~~~~~~~~~~pdi~--s~sK~l~gG~-~~ig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~ 346 (470)
|..+.....|. |++ +++|.++||. .+.|+++. ++++++.++........+.++..+..+...++.+. ..
T Consensus 192 ---~~~~~~l~~Ga--Di~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~tl~--~R 264 (394)
T PRK07050 192 ---GLAFKPFEHGV--DISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLVLRGLPSLQ--VR 264 (394)
T ss_pred ---ccccCHHHcCC--eEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCcHH--HH
Confidence 11111111233 554 7889998542 15787775 67777776543322233456665554443333221 12
Q ss_pred HHHHHHHHHHHHHHHHHHHh----hCCCce---------EEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceec---
Q 012138 347 AERSAHLGEELRQHLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK--- 410 (470)
Q Consensus 347 ~~~~~~~~~~l~~~L~~l~~----~~p~~~---------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~--- 410 (470)
.++..+++.++.+.|++... .||... ....+.|.++.+.+..........+|.+.|...++.++
T Consensus 265 l~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l~~~~~~~s~G~ 344 (394)
T PRK07050 265 LAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEALELFAIGWSWGG 344 (394)
T ss_pred HHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcCCCCeeccccCC
Confidence 33333444455555544211 112100 01124577788877542112356778887776554332
Q ss_pred ------cC------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 411 ------PT------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 411 ------~~------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
|. .++.|||++.+ |+.+.+++-|.++|+
T Consensus 345 ~~sl~~~~~~~~~~~~~~~~~~~~iR~svGl----E~~~dl~~dl~~al~ 390 (394)
T PRK07050 345 ACSLAMPYDVASMRTAKWPHRGTLVRLYIGL----EDEADLIADLEQALE 390 (394)
T ss_pred ccceEeeCcccccchhhcCCCCCEEEEEeCc----CCHHHHHHHHHHHHH
Confidence 21 13679999665 445555555555554
No 287
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.81 E-value=6.2e-18 Score=168.32 Aligned_cols=289 Identities=17% Similarity=0.198 Sum_probs=182.7
Q ss_pred CCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccc
Q 012138 114 FYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAI 193 (470)
Q Consensus 114 ~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 193 (470)
+.++...+|++.++++.+.+..+.++||++|+..++..+.. +|+ .|++..+.|.+...........
T Consensus 58 ~~~p~~~~Le~~lA~~~g~~~~i~~~sG~~Ai~~~l~all~---------~Gd-~Vl~~~~~y~~t~~~~~~~~~~---- 123 (388)
T PRK07811 58 TGNPTRTALEEQLAALEGGAYGRAFSSGMAATDCLLRAVLR---------PGD-HIVIPNDAYGGTFRLIDKVFTR---- 123 (388)
T ss_pred CCCccHHHHHHHHHHHhCCCceEEeCCHHHHHHHHHHHHhC---------CCC-EEEEcCCCchHHHHHHHHhCcC----
Confidence 45667899999999999988888889999999999987754 566 6777888875432211111100
Q ss_pred cCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCccc
Q 012138 194 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS 273 (470)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~ 273 (470)
....+..++..|+++|++++++ ++++|++|.++||+|.+.+ +++|.++|++||+++|+|++|+.. ..
T Consensus 124 -----~gi~~~~~d~~d~e~l~~~i~~---~tklV~ie~p~NPtg~~~d----l~~I~~la~~~gi~lIvD~a~a~~-~~ 190 (388)
T PRK07811 124 -----WGVEYTPVDLSDLDAVRAAITP---RTKLIWVETPTNPLLSITD----IAALAELAHDAGAKVVVDNTFASP-YL 190 (388)
T ss_pred -----CCeEEEEeCCCCHHHHHHhcCc---CCeEEEEECCCCCcceecC----HHHHHHHHHHcCCEEEEECCCCcc-cc
Confidence 0011234444589999998876 7899998888999999988 999999999999999999999732 11
Q ss_pred CCccccccCCCCccee--eccccccC-CCcceeEEEe-cHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHH
Q 012138 274 GRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAER 349 (470)
Q Consensus 274 G~~~~~~~~~~~pdi~--s~sK~l~g-G~~~ig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~ 349 (470)
+... ....|++ +++|.++| |-...|++++ ++++.+.+...........++..++.+...|+.+ +...++
T Consensus 191 ~~p~-----~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~tl--~~R~~~ 263 (388)
T PRK07811 191 QQPL-----ALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTLRGLKTL--AVRMDR 263 (388)
T ss_pred CCch-----hhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCcH--HHHHHH
Confidence 1111 1223554 77899985 3215788776 4666665543322223345666666665555543 234455
Q ss_pred HHHHHHHHHHHHHHHHh----hCCCce---------EEEeccceeEEEEeccCCCchhHHHHHHHHHH--cCcee-----
Q 012138 350 SAHLGEELRQHLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKE--RGILA----- 409 (470)
Q Consensus 350 ~~~~~~~l~~~L~~l~~----~~p~~~---------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~--~Gv~~----- 409 (470)
..++...+.+.|++... .||... ....+.|.++.++++... ..+.+|.+.|.- .+...
T Consensus 264 ~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~--~~~~~f~~~l~~~~~~~s~G~~~s 341 (388)
T PRK07811 264 HSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGE--EAARDFCARTKVFTLAESLGGVES 341 (388)
T ss_pred HHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCH--HHHHHHHHhCCcceeeccCCCCcc
Confidence 56667777777765321 222110 012356889999886321 245566665542 12111
Q ss_pred ---ccC--------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 410 ---KPT--------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 410 ---~~~--------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
.|. .++.|||++.+ |+.+.+++.|.++|+
T Consensus 342 l~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 387 (388)
T PRK07811 342 LIEHPSAMTHASTAGSQLEVPDDLVRLSVGI----EDVADLLADLEQALG 387 (388)
T ss_pred eEeCCcccCcccCCHhhcCCCCCEEEEEeCC----CCHHHHHHHHHHHhh
Confidence 111 14689999655 566777777777765
No 288
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.80 E-value=1.4e-17 Score=169.38 Aligned_cols=321 Identities=16% Similarity=0.158 Sum_probs=191.3
Q ss_pred CCHHHHHHHHHHHHH-c--cccCCCCC--CCcHHHHH----HHHhhhhCCC--eEEec---CChhHHHHHHHHHHHHhch
Q 012138 92 CHPKIMKALQEQAEK-L--TLSSRAFY--NDKFPVFA----ERLTSMFGYD--MVLPM---NTGAEGVETALKLARKWGY 157 (470)
Q Consensus 92 ~~p~v~~a~~~~~~~-~--~~~~~~~~--~~~~~~l~----~~l~~~~~~~--~v~~~---~sGteA~~~al~~~~~~~~ 157 (470)
..|.+++++...+.+ + +..+..++ ......++ +.++++++.+ .+.++ +||++||.+++..+.+
T Consensus 46 ~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al~~--- 122 (452)
T PTZ00094 46 TSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTALLQ--- 122 (452)
T ss_pred CCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHhcC---
Confidence 358899988887754 3 11111111 22233333 4677777743 45455 7899999998887743
Q ss_pred hcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCC-----CHHHHHHHHHhcCCCeEEEEEcc
Q 012138 158 VKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG-----DITALEKIFKESGDQIAGFLFEP 232 (470)
Q Consensus 158 ~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~Le~~l~~~~~~~~~vi~ep 232 (470)
+|+ .|++.... ||............. .......-.+..++++ |+++|++++++. +++.|++.
T Consensus 123 ------~gd-~Ii~~~~e-hg~~l~~~~~l~~~~--~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~--~~~lvi~~- 189 (452)
T PTZ00094 123 ------PHD-RIMGLDLP-SGGHLTHGFYTAKKK--VSATSIYFESLPYQVNEKGLIDYDKLEELAKAF--RPKLIIAG- 189 (452)
T ss_pred ------CCC-EEEecccc-cCCcccccccccccc--cccceeeeeeeecccCCCCCcCHHHHHHHHHHh--CCCEEEEe-
Confidence 455 66664444 655443211000000 0000000001112222 899999999754 44556652
Q ss_pred ccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-CCcccCCccccccCCCCcceeecc--ccccCCCcceeEEEecH
Q 012138 233 IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADK 309 (470)
Q Consensus 233 i~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g~g~~G~~~~~~~~~~~pdi~s~s--K~l~gG~~~ig~v~~~~ 309 (470)
++.+|...| +++|.++|+++|+++++|++|+ |....+ .+..... ..|++++| |++.|.. .|++++++
T Consensus 190 -~s~~g~~~d----i~~I~~i~~~~ga~l~vDaaq~~G~i~~~-~~~~~~~--~~D~l~~S~hK~l~GP~--Gg~l~~~~ 259 (452)
T PTZ00094 190 -ASAYPRDID----YKRFREICDSVGAYLMADIAHTSGLVAAG-VLPSPFP--YADVVTTTTHKSLRGPR--SGLIFYRK 259 (452)
T ss_pred -CCCCCCccC----HHHHHHHHHHcCCEEEEeccchhccccCC-CCCCCCC--CCcEEEcCCccCCCCCC--ceEEEEec
Confidence 446889998 9999999999999999999998 432111 1111111 35777555 9887653 36677766
Q ss_pred HHHhhcCcC---CccCCC--CCCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecccee
Q 012138 310 EVMLCIQPG---EHGSTF--GGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF 381 (470)
Q Consensus 310 ~~~~~~~~~---~~~~t~--~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~ 381 (470)
++.+.+... .....| +.++..+++..++++.+.. +.+.+++.++.++|.+.|.+.+.. .... ......
T Consensus 260 ~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g~~---v~~~-~~~~~~ 335 (452)
T PTZ00094 260 KVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKRGYD---LVTG-GTDNHL 335 (452)
T ss_pred ccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhCCcE---EecC-CCCCce
Confidence 544322111 011111 3567788888888988854 457788888999999888763211 1110 111223
Q ss_pred EEEEeccCCCchhHHHHHHHHHHcCceec----cC-----CCCEEEEecCCCCC----HHHHHHHHHHHHHHHhccc
Q 012138 382 NAVEFDKTALPVSAYDICLKMKERGILAK----PT-----HDTIVRLTPPLSIS----SNELQEGSKALHDVLELDL 445 (470)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~~-----~~~~iR~~~~~~~t----~e~i~~~~~~l~~~l~~~~ 445 (470)
..+.+... +.+...+...|.++||.+. |+ .++.+|++++..++ ++|++++++.|.+++. ..
T Consensus 336 ~~v~~~~~--~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~-~~ 409 (452)
T PTZ00094 336 VLVDLRPF--GITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVK-LA 409 (452)
T ss_pred EeecCCcC--CCCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHH-HH
Confidence 33333322 2366788888888899985 22 24789999976665 9999999999999998 53
No 289
>PRK05968 hypothetical protein; Provisional
Probab=99.80 E-value=6e-18 Score=168.49 Aligned_cols=278 Identities=17% Similarity=0.097 Sum_probs=179.3
Q ss_pred CCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccch---hcccCCc
Q 012138 114 FYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAA---ISMSCDN 190 (470)
Q Consensus 114 ~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~---~~~~~~~ 190 (470)
+.++...+|++.++++.|.+..++++||+.|+..++..... +|+ .||+..+.|++..... ....+
T Consensus 60 ~~~p~~~~le~~lA~l~g~~~av~~~sG~~Ai~~al~al~~---------~Gd-~Vl~~~~~y~~t~~~~~~~~~~~G-- 127 (389)
T PRK05968 60 GDNPTVRAFEEMLAKLEGAEDARGFASGMAAISSTVLSFVE---------PGD-RIVAVRHVYPDAFRLFETILKRMG-- 127 (389)
T ss_pred CCChhHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhC---------CCC-EEEEeCCCchHHHHHHHHHHHHcC--
Confidence 44566889999999999988888889999999988876544 566 6777777875532111 11111
Q ss_pred ccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCC
Q 012138 191 EAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 270 (470)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~ 270 (470)
..+..++.+|++++++++ + ++++|++|.+.|+.+.+.+ +++|.++|++||+++|+|++|+..
T Consensus 128 ----------~~v~~vd~~d~~~l~~~i-~---~tklV~ie~pt~~~~~~~d----l~~i~~la~~~gi~vivD~a~a~~ 189 (389)
T PRK05968 128 ----------VEVDYVDGRDEEAVAKAL-P---GAKLLYLESPTSWVFELQD----VAALAALAKRHGVVTMIDNSWASP 189 (389)
T ss_pred ----------ceEEEeCCCCHHHHHHhc-c---cCCEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCCcch
Confidence 112344555899999887 3 6788888866666666655 999999999999999999999732
Q ss_pred cccCCccccccCCCCccee--eccccccC-C-CcceeEEEecHHHHhhcCcCCc-cCCCCCCHHHHHHHHHHHHHHhhhh
Q 012138 271 ARSGRMLASDWEEVRPDMV--ILGKALGG-G-VIPVSAVLADKEVMLCIQPGEH-GSTFGGNPLASAVAIASLDVIRDEK 345 (470)
Q Consensus 271 g~~G~~~~~~~~~~~pdi~--s~sK~l~g-G-~~~ig~v~~~~~~~~~~~~~~~-~~t~~~~~~~~aaa~a~l~~~~~~~ 345 (470)
.. .... ..+. |++ +++|.++| | . ..|++++++++++.++.... ......++..++.+...|+.+ ..
T Consensus 190 ~~-~~p~---~~g~--Divv~S~tK~l~g~~~~-~gG~i~~~~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~tl--~~ 260 (389)
T PRK05968 190 VF-QRPI---TLGV--DLVIHSASKYLGGHSDT-VAGVVAGSKEHIARINAEAYPYLGAKLSPFEAWLLLRGLRTL--PL 260 (389)
T ss_pred hc-cCch---hcCC--cEEEeeccccccCCCCe-EEEEEEECHHHHHHHHHHHHHhCCCCCChHHHHHHHcccCcH--HH
Confidence 11 1111 1233 554 77899985 3 4 67888889888877653211 112346777777776666655 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCceEEEe-------------ccceeEEEEeccCCCchhHHHHHHHHHHcCceec--
Q 012138 346 LAERSAHLGEELRQHLFKIQQQFPNYVKEVR-------------GRGLFNAVEFDKTALPVSAYDICLKMKERGILAK-- 410 (470)
Q Consensus 346 ~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~-------------~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~-- 410 (470)
..++..++..++.+.|++. | .+..+. +.|.++.++++.. ....+|++.|...++.++
T Consensus 261 r~~~~~~~a~~la~~L~~~----p-~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~---~~~~~f~~~L~~~~~~~s~G 332 (389)
T PRK05968 261 RMKAHEASALEIARRLKAH----P-VVERVCHPALANHPPAGLSGTSGLFSFIFREG---IDVRAFADALKLFRLGVSWG 332 (389)
T ss_pred HHHHHHHHHHHHHHHHHhC----C-CccEEECCCCCCChHHhCCCCceEEEEEECCH---HHHHHHHHhCCccEEecCCC
Confidence 4444455566677777653 2 222221 4467888887632 367788888876553322
Q ss_pred -------cC------------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 411 -------PT------------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 411 -------~~------------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
|. .++.+|+++.+.. .+++++-|+++|+
T Consensus 333 ~~~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE~----~~dl~~dl~~al~ 385 (389)
T PRK05968 333 GHESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGLEG----TEALWADLEQALA 385 (389)
T ss_pred CCCceeeeCcccccccCCHHHHHhcCCCCCeEEEEeccCC----HHHHHHHHHHHHH
Confidence 21 1468999976644 4555555555554
No 290
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.80 E-value=3.1e-17 Score=167.34 Aligned_cols=278 Identities=19% Similarity=0.216 Sum_probs=170.6
Q ss_pred HHHHHHhhhhCC--CeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcc----cCCccccc
Q 012138 121 VFAERLTSMFGY--DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISM----SCDNEAIR 194 (470)
Q Consensus 121 ~l~~~l~~~~~~--~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~----~~~~~~~~ 194 (470)
++.+++++++|. +++++++||++++++++...... +++ .|++.++. |......+.. .+....
T Consensus 116 e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~--------~g~-~Vlv~~~~-~~~~~~~~~~~~~~~G~~~~-- 183 (447)
T PRK00451 116 EYQTMICELTGMDVANASMYDGATALAEAALMAVRIT--------KRK-KVLVSGAV-HPEYREVLKTYLKGQGIEVV-- 183 (447)
T ss_pred HHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHhc--------CCC-EEEEeCcc-CHHHHHHHHHHHHhCCcEEE--
Confidence 344667888875 46889999999988877655321 344 67766665 4443333221 111111
Q ss_pred CCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEE--eccccCCcc
Q 012138 195 GFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA--DEIQSGLAR 272 (470)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~--Dev~~g~g~ 272 (470)
..+..++ .+ |+++|++++++ ++++|+++.. |++|.+.| +++|.++|+++|+++|+ |.+..|+
T Consensus 184 -~v~~~~~--~~---d~~~l~~~i~~---~t~~v~l~~p-n~tG~v~~----l~~I~~~a~~~~~~~iv~~d~~~~g~-- 247 (447)
T PRK00451 184 -EVPYEDG--VT---DLEALEAAVDD---DTAAVVVQYP-NFFGVIED----LEEIAEIAHAGGALFIVGVDPVSLGL-- 247 (447)
T ss_pred -EecCCCC--CC---CHHHHHHhcCC---CeEEEEEECC-CCCCeeCC----HHHHHHHHHHCCCEEEEEcChHHhcc--
Confidence 1111111 22 89999998875 7888887775 88999998 99999999999999998 5443221
Q ss_pred cCCccccccCCCCcceee-----cccccc-CCCcceeEEEecHHHHhhcCcC---------------------------C
Q 012138 273 SGRMLASDWEEVRPDMVI-----LGKALG-GGVIPVSAVLADKEVMLCIQPG---------------------------E 319 (470)
Q Consensus 273 ~G~~~~~~~~~~~pdi~s-----~sK~l~-gG~~~ig~v~~~~~~~~~~~~~---------------------------~ 319 (470)
......+ ..|+++ |||.+. +|. ++|++++++++++.+.+. .
T Consensus 248 ---~~~~~~~--~~D~~~~s~~k~~~~~~~~Gp-g~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (447)
T PRK00451 248 ---LKPPGEY--GADIVVGEGQPLGIPLSFGGP-YLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRRE 321 (447)
T ss_pred ---CCCcccC--CCCEEEECCCcCCCCCCCCCC-CchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccc
Confidence 1111222 336653 455544 677 899999999888874211 0
Q ss_pred cc-CCCCCCH-HHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchh
Q 012138 320 HG-STFGGNP-LASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVS 394 (470)
Q Consensus 320 ~~-~t~~~~~-~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~ 394 (470)
++ .+++.+. +...++..+++.+.+ +++.++..++++++.+.|+++. .+... ..+.+..+.+..+. +
T Consensus 322 ~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~-----g~~~~-~~~~~~~~~v~~~~---~ 392 (447)
T PRK00451 322 KATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIG-----GVELF-DGPFFNEFVVRLPK---P 392 (447)
T ss_pred cccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcC-----CEEec-CCCeEEEEEEecCC---C
Confidence 11 1111221 222233334444433 4566777778888888887642 23222 22222222222222 4
Q ss_pred HHHHHHHHHHcCceec-------cCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 012138 395 AYDICLKMKERGILAK-------PTHDTIVRLTPPLSISSNELQEGSKALHDVL 441 (470)
Q Consensus 395 ~~~~~~~l~~~Gv~~~-------~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l 441 (470)
..+++++|.++|+.+. +...+++|++++..+|+++++++++.|++++
T Consensus 393 ~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 393 AEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred HHHHHHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 6789999999988742 1124689999988899999999999998875
No 291
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.80 E-value=2.7e-18 Score=172.62 Aligned_cols=161 Identities=19% Similarity=0.200 Sum_probs=121.8
Q ss_pred CCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccch---hcccCC
Q 012138 113 AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAA---ISMSCD 189 (470)
Q Consensus 113 ~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~---~~~~~~ 189 (470)
.+.++...+|+++++++.|.+.+++++||++|+..++..+.. +|+ .||+..+.|++..... ....+
T Consensus 53 r~~~p~~~~le~~lA~l~g~~~~v~~~sG~~Ai~~al~~l~~---------~Gd-~Vl~~~~~y~~t~~~~~~~~~~~G- 121 (418)
T TIGR01326 53 RLMNPTTDVLEQRIAALEGGVAALAVASGQAAITYAILNLAQ---------AGD-NIVSSSYLYGGTYNLFKHTLKRLG- 121 (418)
T ss_pred CCCChhHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhC---------CCC-EEEEECCCcHHHHHHHHHHHHHcC-
Confidence 356677899999999999999999999999999999987754 455 6777788876532211 11111
Q ss_pred cccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccC
Q 012138 190 NEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 269 (470)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g 269 (470)
..+..++.+|++++++++++ ++++|++|.++||+|.+.| +++|.++|++||+++|+||+|+.
T Consensus 122 -----------~~v~~v~~~d~~~l~~~l~~---~t~~V~le~p~NPtg~v~d----l~~I~~la~~~~i~livD~t~~~ 183 (418)
T TIGR01326 122 -----------IEVRFVDPDDPEEFEKAIDE---NTKAVFAETIGNPAINVPD----IEAIAEVAHAHGVPLIVDNTFAT 183 (418)
T ss_pred -----------cEEEEECCCCHHHHHHhcCc---CCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCch
Confidence 11345556689999999875 7889999998999999998 99999999999999999999862
Q ss_pred CcccCCccccccCCCCccee--eccccccC-CCcceeEEEecH
Q 012138 270 LARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLADK 309 (470)
Q Consensus 270 ~g~~G~~~~~~~~~~~pdi~--s~sK~l~g-G~~~ig~v~~~~ 309 (470)
. .. .......+|++ |++|.++| |. ++|++++++
T Consensus 184 ~-~~-----~~~l~~g~Divv~S~sK~l~g~G~-~lGg~v~~~ 219 (418)
T TIGR01326 184 P-YL-----CRPIDHGADIVVHSATKYIGGHGT-AIGGVIVDG 219 (418)
T ss_pred h-hc-----CCchhcCCeEEEECccccccCCcc-ceEEEEEec
Confidence 1 11 11122235765 88899996 87 999988754
No 292
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.79 E-value=7.2e-17 Score=162.60 Aligned_cols=314 Identities=14% Similarity=0.165 Sum_probs=190.0
Q ss_pred HHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCc
Q 012138 97 MKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCF 176 (470)
Q Consensus 97 ~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~y 176 (470)
.+++.+.+...... ..+...++++.++++++.+++++++||++|+..++.++.....+..+..+|+ .||+..++|
T Consensus 47 ~~a~~~~~~~~~~~----~G~~~~~fe~~lA~~~g~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd-~VIv~~~t~ 121 (438)
T PRK15407 47 LQNLVDASLDFWLT----TGRFNDAFEKKLAEFLGVRYALLVNSGSSANLLAFSALTSPKLGDRALKPGD-EVITVAAGF 121 (438)
T ss_pred HHHHHHHHHhCccc----CChhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHhhccccccCCCCCC-EEEECCCCc
Confidence 44455555443322 2344688999999999999999999999999999987642111111233565 788888887
Q ss_pred cccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHh
Q 012138 177 HGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK 256 (470)
Q Consensus 177 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~ 256 (470)
.+........+..+.+ .+..+....+ |++++++++++ ++++|++.++ .|...+ +++|.++|++
T Consensus 122 ~a~~~~v~~~G~~pv~----vdvd~~~~~i---d~~~le~~i~~---~tkaVi~~~~---~G~p~d----l~~I~~la~~ 184 (438)
T PRK15407 122 PTTVNPIIQNGLVPVF----VDVELPTYNI---DASLLEAAVSP---KTKAIMIAHT---LGNPFD----LAAVKAFCDK 184 (438)
T ss_pred HHHHHHHHHcCCEEEE----EecCCCcCCc---CHHHHHHHcCc---CCeEEEEeCC---CCChhh----HHHHHHHHHH
Confidence 5544333322221111 1111111122 89999998875 7888887663 455555 9999999999
Q ss_pred cCcEEEEecccc-CCcccCCccccccCCCCcceeecc----ccccCCCcceeEEEec-HHHHhhcCcC------------
Q 012138 257 YNILMIADEIQS-GLARSGRMLASDWEEVRPDMVILG----KALGGGVIPVSAVLAD-KEVMLCIQPG------------ 318 (470)
Q Consensus 257 ~gillI~Dev~~-g~g~~G~~~~~~~~~~~pdi~s~s----K~l~gG~~~ig~v~~~-~~~~~~~~~~------------ 318 (470)
||++||+|++|+ |--..|+.. ..+| |+.+|| |.+..| ..|+++.+ +++.+.++..
T Consensus 185 ~gi~vIeDaa~a~G~~~~g~~~--G~~g---d~~~fSf~~~k~~~~g--eGG~l~t~d~~l~~~~~~~~~~G~~~~~~~~ 257 (438)
T PRK15407 185 HNLWLIEDNCDALGSTYDGRMT--GTFG---DIATLSFYPAHHITMG--EGGAVFTNDPLLKKIIESFRDWGRDCWCAPG 257 (438)
T ss_pred CCCEEEEECccchhhhcCCeee--eccC---ceEEEeCCCCCCcccc--CceEEEECCHHHHHHHHHHHHhCcccccccc
Confidence 999999999998 322333321 1122 666555 556655 33666654 4444322110
Q ss_pred ---------------------------CccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh--hCC
Q 012138 319 ---------------------------EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ--QFP 369 (470)
Q Consensus 319 ---------------------------~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~--~~p 369 (470)
..+..+..+.+.++.+...|+.++ .+.++.+++.+++.+.|..+.. ..|
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~~l~--~~~~~R~~~a~~y~~~L~~~~~~~~~~ 335 (438)
T PRK15407 258 CDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLEKLP--GFIEARKANFAYLKEGLASLEDFLILP 335 (438)
T ss_pred cccccccccccccccccccccccccccccccccCccHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhccCCCccccC
Confidence 123445578889999988888774 4667778888888888865421 111
Q ss_pred CceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccC-----C-----------------------CCEEEEec
Q 012138 370 NYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-----H-----------------------DTIVRLTP 421 (470)
Q Consensus 370 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----~-----------------------~~~iR~~~ 421 (470)
.........-.++.+.++... +.+..++.+.|.++||.+... + ...+-+-.
T Consensus 336 ~~~~~~~~~~~~~~i~~~~~~-~~~Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~ 414 (438)
T PRK15407 336 EATPNSDPSWFGFPITVKEDA-GFTRVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGV 414 (438)
T ss_pred cCCCCCeeEEEEEEEEECCcC-CCCHHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecC
Confidence 000011111123334343211 235789999999999965411 0 12233333
Q ss_pred CCCCCHHHHHHHHHHHHHHHh
Q 012138 422 PLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 422 ~~~~t~e~i~~~~~~l~~~l~ 442 (470)
....|++++++.++.|+++++
T Consensus 415 ~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 415 YPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred CCCCCHHHHHHHHHHHHHHHh
Confidence 345789999999999999875
No 293
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.79 E-value=1.2e-16 Score=159.24 Aligned_cols=298 Identities=17% Similarity=0.198 Sum_probs=179.6
Q ss_pred HHHhhhhCCCeE-EecCChhHHHHHHHHHHHHhchhcccC-CCC--------------------CcEEEEEccCcccccc
Q 012138 124 ERLTSMFGYDMV-LPMNTGAEGVETALKLARKWGYVKKKF-SID--------------------EAIIVSCCGCFHGRTL 181 (470)
Q Consensus 124 ~~l~~~~~~~~v-~~~~sGteA~~~al~~~~~~~~~~~~~-~~g--------------------~~~ii~~~~~yhg~~~ 181 (470)
++..++++.+.+ +=..||+.||.+++.++.+....++-. .+| .+.|+..+.. ||..+
T Consensus 102 ~ra~~lf~a~~anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~-~GGHl 180 (493)
T PRK13580 102 EHAKELFGAEHAYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLD-SGGHL 180 (493)
T ss_pred HHHHHHhCCCcccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCC-CCCee
Confidence 445566787764 334689999999998776510000000 012 3477777665 44332
Q ss_pred chh---cccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcC
Q 012138 182 AAI---SMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN 258 (470)
Q Consensus 182 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~g 258 (470)
..- ..++. .+.....++.+....+ |++++++.+++ .++.|++....+- |...| +++|+++|++||
T Consensus 181 thg~~~n~~~~-~~~~~~y~vd~~~g~i---D~d~l~~~~~~---~~plvii~g~S~~-~~~~d----l~~i~eia~~~g 248 (493)
T PRK13580 181 THGFRPNISGK-MFHQRSYGVDPDTGLL---DYDEIAALARE---FKPLILVAGYSAY-PRRVN----FAKLREIADEVG 248 (493)
T ss_pred ecCcccchhhh-eeeeEecccCcccCcc---CHHHHHHHHhh---cCCEEEEeCcccc-CCCcC----HHHHHHHHHHcC
Confidence 211 01110 0100001111111223 89999999987 4555665564555 44667 999999999999
Q ss_pred cEEEEecccc-CCcccCCcccc--ccCCCCccee--eccccccCCCcceeEEEecHHHHhhcCcCCccCCCC-CCHHHHH
Q 012138 259 ILMIADEIQS-GLARSGRMLAS--DWEEVRPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG-GNPLASA 332 (470)
Q Consensus 259 illI~Dev~~-g~g~~G~~~~~--~~~~~~pdi~--s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~-~~~~~~a 332 (470)
++|++|++|+ |+-. |..+.. ... ...|++ |++|++.|. +.|++++++++.+.+... ....|+ ..+..++
T Consensus 249 A~L~VD~AH~~Glig-g~~~~~~~~~~-~~~D~vtgT~hKaL~GP--~GG~I~~~~~l~~~L~~a-~P~i~gg~l~p~iA 323 (493)
T PRK13580 249 AVLMVDMAHFAGLVA-GKVFTGDEDPV-PHADIVTTTTHKTLRGP--RGGLVLAKKEYADAVDKG-CPLVLGGPLPHVMA 323 (493)
T ss_pred CEEEEECchhhceec-cccchhhcCCC-CCCcEEEeCChhhccCC--CeEEEEecHHHHHHHhhC-CCcccCCCccHHHH
Confidence 9999999998 5321 222210 111 134655 777999654 457788999988887422 233343 2233444
Q ss_pred HHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCcee
Q 012138 333 VAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA 409 (470)
Q Consensus 333 aa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~ 409 (470)
++..++..+.+ ..+++++.++.++|++.|.+.+.. .+.. .....++.+.+.... .....+.+.|.+.||++
T Consensus 324 A~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~G~~---vv~g-gTdshIV~V~lg~~~--~~g~~a~~~L~e~GI~v 397 (493)
T PRK13580 324 AKAVALAEARTPEFQKYAQQVVDNARALAEGFLKRGAR---LVTG-GTDNHLVLIDVTSFG--LTGRQAESALLDAGIVT 397 (493)
T ss_pred HHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhcCCC---ccCC-CCCCCEEEEEeCCHH--HHHHHHHHHHHHCCeEE
Confidence 44445555543 347889999999999999886432 1110 134566677664432 23346777999999998
Q ss_pred cc----C---C---CCEEEEecCC----CCCHHHHHHHHHHHHHHHhcccC
Q 012138 410 KP----T---H---DTIVRLTPPL----SISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 410 ~~----~---~---~~~iR~~~~~----~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
.+ . + ...|||+++. .++++|++++++.|.++++ ...
T Consensus 398 n~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~-~~~ 447 (493)
T PRK13580 398 NRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLS-NTT 447 (493)
T ss_pred ccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHH-hhh
Confidence 62 2 2 5679999887 5579999999999999998 653
No 294
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.79 E-value=5.8e-18 Score=167.41 Aligned_cols=291 Identities=12% Similarity=0.081 Sum_probs=176.2
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCC-------CCcHHHHHHHHhhhhCC--CeEEecCChhHHHHHHHHHHHHhchhcc
Q 012138 90 GHCHPKIMKALQEQAEKLTLSSRAFY-------NDKFPVFAERLTSMFGY--DMVLPMNTGAEGVETALKLARKWGYVKK 160 (470)
Q Consensus 90 G~~~p~v~~a~~~~~~~~~~~~~~~~-------~~~~~~l~~~l~~~~~~--~~v~~~~sGteA~~~al~~~~~~~~~~~ 160 (470)
+..++.+.+++.+.+......+.... .+..++++++++++++. +.+++++|++++++.+++.+.....
T Consensus 8 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~--- 84 (353)
T TIGR03235 8 TPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGE--- 84 (353)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcc---
Confidence 34679999999988865322222111 13356788889998875 4799999999999999887654210
Q ss_pred cCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccc
Q 012138 161 KFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVI 240 (470)
Q Consensus 161 ~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~ 240 (470)
.++++.|++.... |.+................+.+...+ .. .|+++|++++++ ++++|+++.++|++|.+
T Consensus 85 --~~g~~~vi~~~~~-~~s~~~~~~~~~~~G~~v~~v~~~~~-~~---~d~~~l~~~l~~---~~~lv~~~~~~n~tG~~ 154 (353)
T TIGR03235 85 --QKGKKHIITSAIE-HPAVLEPIRALERNGFTVTYLPVDES-GR---IDVDELADAIRP---DTLLVSIMHVNNETGSI 154 (353)
T ss_pred --cCCCCeeeEcccc-cHHHHHHHHHHHhcCCEEEEEccCCC-Cc---CCHHHHHHhCCC---CCEEEEEEcccCCceec
Confidence 1343466665544 33322221110000111100111000 11 278999998865 68888888889999999
Q ss_pred cCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecc--ccccCCCcceeEEEecHHHHhh--cC
Q 012138 241 IPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLC--IQ 316 (470)
Q Consensus 241 ~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~s--K~l~gG~~~ig~v~~~~~~~~~--~~ 316 (470)
.| +++|.++|++||+++|+|++|+ +|.. .+..+.+ .+|+++++ |.++ .. .+|+++.+++..+. +.
T Consensus 155 ~~----~~~I~~l~~~~~~~~ivD~a~~-~g~~--~~~~~~~--~~D~~~~s~~K~~g-p~-g~g~l~~~~~~~~~~~~~ 223 (353)
T TIGR03235 155 QP----IREIAEVLEAHEAFFHVDAAQV-VGKI--TVDLSAD--RIDLISCSGHKIYG-PK-GIGALVIRKRGKPKAPLK 223 (353)
T ss_pred cC----HHHHHHHHHHcCCEEEEEchhh-cCCc--ccccccc--CCCEEEeehhhcCC-CC-ceEEEEEccCcccccccC
Confidence 98 9999999999999999999998 2211 1122223 35777666 9754 22 57888888775322 22
Q ss_pred cCCc-------cCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEE-eccceeEEEEe
Q 012138 317 PGEH-------GSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEF 386 (470)
Q Consensus 317 ~~~~-------~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~-~~~g~~~~~~~ 386 (470)
+... ....+.++...++..++++.+.+ +.+.++.+++.+++++.|++.+-+ .+... .....+..+.+
T Consensus 224 ~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~g~~---~~~~~~~~~~~i~~~~~ 300 (353)
T TIGR03235 224 PIMFGGGQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQTLGVK---LNGDPAETIPHILNFSI 300 (353)
T ss_pred ceeeCCCCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCeE---EeCCcccccCCEEEEEe
Confidence 2111 11234566777777788887653 456778888888888887663211 11100 11233444443
Q ss_pred ccCCCchhHHHHHHHHHHcCceeccC
Q 012138 387 DKTALPVSAYDICLKMKERGILAKPT 412 (470)
Q Consensus 387 ~~~~~~~~~~~~~~~l~~~Gv~~~~~ 412 (470)
+. .+..++.+.|.+ +|.+.++
T Consensus 301 ~~----~~~~~v~~~L~~-~i~v~~g 321 (353)
T TIGR03235 301 DG----VNSEALIVNLRA-DAAVSTG 321 (353)
T ss_pred CC----cCHHHHHHHHhC-CeEEEch
Confidence 32 356788888865 8888765
No 295
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.78 E-value=1e-16 Score=160.04 Aligned_cols=312 Identities=15% Similarity=0.189 Sum_probs=192.8
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHH-HHhchhcccCCCCCcEEEEE
Q 012138 94 PKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLA-RKWGYVKKKFSIDEAIIVSC 172 (470)
Q Consensus 94 p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~-~~~~~~~~~~~~g~~~ii~~ 172 (470)
++-.+++.+.++...+. ..+...++++.++++++.+++++++||++|+..+++.+ .. +|+ .|++.
T Consensus 10 ~~~~~~v~~~~~~~~~~----~g~~~~~le~~la~~~g~~~~v~~~sgt~al~~~l~al~~~---------~Gd-~Viv~ 75 (380)
T TIGR03588 10 QDDIDAVVEVLKSDFLT----QGPTVPAFEEALAEYVGAKYAVAFNSATSALHIACLALGVG---------PGD-RVWTT 75 (380)
T ss_pred HHHHHHHHHHHhcCCcc----CChhHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHHHcCCC---------CCC-EEEeC
Confidence 45577777777654322 23456889999999999888888899999999999876 22 455 78888
Q ss_pred ccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcC-CCeEEEEEccccCCCccccCChhhHHHHH
Q 012138 173 CGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVR 251 (470)
Q Consensus 173 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~-~~~~~vi~epi~n~~G~~~~~~~~l~~l~ 251 (470)
.++|..........+.... +.+..++...+ |++++++.+++.+ +++++|++ .+++|...+ +++|.
T Consensus 76 ~~~~~~~~~~~~~~G~~~~----~~~~~~~~~~~---d~~~l~~~i~~~~~~~t~~v~~---~~~~G~~~~----~~~i~ 141 (380)
T TIGR03588 76 PITFVATANCALYCGAKVD----FVDIDPDTGNI---DEDALEKKLAAAKGKLPKAIVP---VDFAGKSVD----MQAIA 141 (380)
T ss_pred CcchHHHHHHHHHcCCEEE----EEecCCCcCCc---CHHHHHHHhhcccCCCceEEEE---eCCCCccCC----HHHHH
Confidence 8887554322222222111 11111111122 8999999997321 26788774 346788887 99999
Q ss_pred HHHHhcCcEEEEecccc-CCcccCCccccccCCCCcceeecc----ccccCCCcceeEEE-ecHHHHhhcCcC-------
Q 012138 252 DLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDMVILG----KALGGGVIPVSAVL-ADKEVMLCIQPG------- 318 (470)
Q Consensus 252 ~l~~~~gillI~Dev~~-g~g~~G~~~~~~~~~~~pdi~s~s----K~l~gG~~~ig~v~-~~~~~~~~~~~~------- 318 (470)
++|++||++||+|++|+ |....|..+... . .-|+.++| |.++.| ..|+++ .++++.+.++..
T Consensus 142 ~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~--~-~~d~~~~S~~~~K~~~~~--~GG~v~~~~~~~~~~~~~~~~~g~~~ 216 (380)
T TIGR03588 142 ALAKKHGLKIIEDASHALGAEYGGKPVGNC--R-YADATVFSFHPVKIITTA--EGGAVTTNDEELAERMRLLRSHGITK 216 (380)
T ss_pred HHHHHcCCEEEEECCCcccCccCCEeCCCc--c-ccceEEEecCCCCccccc--CceEEEECCHHHHHHHHHHHHCCCCC
Confidence 99999999999999998 322233222110 0 22666555 777644 344455 456666554321
Q ss_pred ------------------CccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceE-EEeccc
Q 012138 319 ------------------EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVK-EVRGRG 379 (470)
Q Consensus 319 ------------------~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~-~~~~~g 379 (470)
..+..+..+.+.++.+.+.|+.+ +.+.++.+++.+++.+.|..+....+.... ......
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l--~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~ 294 (380)
T TIGR03588 217 DPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKL--DRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAW 294 (380)
T ss_pred CcccccccccCcceeeeeccccccCccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEE
Confidence 01222345667777777777655 456777888888888888765321100000 000111
Q ss_pred eeEEEEeccCCCchhHHHHHHHHHHcCceeccCC-------------------------CCEEEEecCCCCCHHHHHHHH
Q 012138 380 LFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-------------------------DTIVRLTPPLSISSNELQEGS 434 (470)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-------------------------~~~iR~~~~~~~t~e~i~~~~ 434 (470)
.++.+.+... .+....++.+.|.++||.+.... .+.+++......|++|+++++
T Consensus 295 ~~~~i~~~~~-~~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~ 373 (380)
T TIGR03588 295 HLYPILLDQE-FGCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVV 373 (380)
T ss_pred EEEEEEECCc-CCCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHH
Confidence 2333334321 12367899999999999764210 255777767778999999999
Q ss_pred HHHHHHH
Q 012138 435 KALHDVL 441 (470)
Q Consensus 435 ~~l~~~l 441 (470)
+.|++++
T Consensus 374 ~~l~~~~ 380 (380)
T TIGR03588 374 ETLRKVL 380 (380)
T ss_pred HHHHHhC
Confidence 9998874
No 296
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.78 E-value=5.4e-17 Score=155.69 Aligned_cols=343 Identities=14% Similarity=0.160 Sum_probs=199.0
Q ss_pred CeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCC-C----CCcHHHHHHHHhhhhCC--CeEEecCChhHHHHH
Q 012138 75 NKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAF-Y----NDKFPVFAERLTSMFGY--DMVLPMNTGAEGVET 147 (470)
Q Consensus 75 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~-~----~~~~~~l~~~l~~~~~~--~~v~~~~sGteA~~~ 147 (470)
.-|||..+. +..+|.|.+++.+.+..+...+... + .+..++.++.++++.+. ++|+||+++||++.+
T Consensus 44 ~vyld~~at------~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nl 117 (428)
T KOG1549|consen 44 PVYLDNQAT------GPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNL 117 (428)
T ss_pred cEEEecCcC------CCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHH
Confidence 357776543 4478999999999887754443322 1 11245566778888864 359999999999999
Q ss_pred HHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEE
Q 012138 148 ALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAG 227 (470)
Q Consensus 148 al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~ 227 (470)
+++-.-.. +.+ + .++.||..... |.+.........+......|.|+. +...+ |++.+++.|+. +|++
T Consensus 118 vl~~v~~~-~~~-~---~~k~iitl~~e-H~~v~~s~~~l~~~g~~Vt~lpv~-~~~~~---d~~~~~~~i~~---~T~l 184 (428)
T KOG1549|consen 118 VLKGVARF-FGD-K---TKKHIITLQTE-HPCVLDSCRALQEEGLEVTYLPVE-DSGLV---DISKLREAIRS---KTRL 184 (428)
T ss_pred HHHHhhcc-ccc-c---ccceEEEeccc-CcchhHHHHHHHhcCeEEEEeccC-ccccc---cHHHHHHhcCC---CceE
Confidence 99955331 111 1 23367776666 665554443333333433333432 21222 78999999987 8999
Q ss_pred EEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecc--ccccCCCcceeEE
Q 012138 228 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAV 305 (470)
Q Consensus 228 vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~s--K~l~gG~~~ig~v 305 (470)
|.|+.++|+.|++.| +++|.++|+++|+.+++|.+|+ .|+.- .+-..+.+|+++++ |.+++- ++|++
T Consensus 185 v~I~~Vnn~~gv~~P----v~EI~~icr~~~v~v~~DaAQa----vG~i~-vDV~eln~D~~s~s~HK~ygp~--~iGaL 253 (428)
T KOG1549|consen 185 VSIMHVNNEIGVLQP----VKEIVKICREEGVQVHVDAAQA----VGKIP-VDVQELNADFLSISAHKIYGPP--GIGAL 253 (428)
T ss_pred EEEEecccCcccccc----HHHHHHHhCcCCcEEEeehhhh----cCCcc-ccHHHcCchheeeecccccCCC--cceEE
Confidence 999999999999999 9999999999999999999998 33321 34445566887666 877753 48999
Q ss_pred EecHHHHhhcC--cCCccC-----CC--CCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHH-HHhhCCCceE
Q 012138 306 LADKEVMLCIQ--PGEHGS-----TF--GGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFK-IQQQFPNYVK 373 (470)
Q Consensus 306 ~~~~~~~~~~~--~~~~~~-----t~--~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~-l~~~~p~~~~ 373 (470)
++++. ...++ +...++ -. +.+.+.+...-++.+...+ .....+.+++...+..++.. +....-.+..
T Consensus 254 Yvr~~-~~~~~~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~~~~~~~ll~~i~~~~~~~~~~G~~ 332 (428)
T KOG1549|consen 254 YVRRK-RPRLRVEPPLSGGGQERGLRSGTVATPLAVGLGSAAEFVNKEMAYDEAIIKRLSEKLLMGIGQSLPEVTLNGSG 332 (428)
T ss_pred EEccC-CCcccccCcccCCccccccccCCcCchhhhhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHhhhCchhhccCCc
Confidence 98861 12222 111111 01 2344444444455555443 22233333344444333322 1100000000
Q ss_pred -EEeccceeEEEEeccCCC-chhH---------------HHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHH
Q 012138 374 -EVRGRGLFNAVEFDKTAL-PVSA---------------YDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKA 436 (470)
Q Consensus 374 -~~~~~g~~~~~~~~~~~~-~~~~---------------~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~ 436 (470)
...+....+.+....... ..+. .+....|+..|+-... ...++||+.....+++|++++++.
T Consensus 333 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~-~~~~iRis~G~y~t~~di~~~~~~ 411 (428)
T KOG1549|consen 333 KSRYPGLVSLSFPYVEGESLLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDL-AHSSIRISIGRYTTEEDIDYLVDA 411 (428)
T ss_pred ccccccceeeecccccCcchhhhhhhhhhcccchhhcCCCCcchhhhhcCcchhh-hcceeEEeeeeeCcHHHHHHHHHH
Confidence 111112222222001110 0000 0112233344442222 267899999999999999999999
Q ss_pred HHHHHhcccCCCCC
Q 012138 437 LHDVLELDLPKMRK 450 (470)
Q Consensus 437 l~~~l~~~~~~~~~ 450 (470)
+.+.+. .++....
T Consensus 412 i~~~v~-~~~~~s~ 424 (428)
T KOG1549|consen 412 IKKLVS-LLREMSP 424 (428)
T ss_pred HHHHHH-hccccCC
Confidence 999998 7665544
No 297
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.78 E-value=5.9e-17 Score=160.22 Aligned_cols=289 Identities=11% Similarity=0.060 Sum_probs=179.0
Q ss_pred CCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccc
Q 012138 114 FYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAI 193 (470)
Q Consensus 114 ~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 193 (470)
..++...+|++.++++.+.+.+++++||++|+..++..+.+ +|+ .||+.++.|.+........-.
T Consensus 58 ~~npt~~~Le~~iA~le~~~~~~~~~sG~~Ai~~~l~all~---------~GD-~Vvv~~~~Y~~t~~l~~~~l~----- 122 (394)
T PRK09028 58 RGTPTHFAFQAAIVELEGGAGTALYPSGAAAISNALLSFLK---------AGD-HLLMVDSCYEPTRDLCDKILK----- 122 (394)
T ss_pred CCCchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhC---------CCC-EEEEECCCcHHHHHHHHHhhh-----
Confidence 34566789999999998878899999999999999887654 566 777778887544321100000
Q ss_pred cCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCccc
Q 012138 194 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS 273 (470)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~ 273 (470)
.+...+..++..+.+++++++++ ++++|++|.++||+|.+.+ +++|.++|++||+++|+|++|+.
T Consensus 123 ----~~Gi~v~~v~~~~~e~l~~~l~~---~TklV~lespsNPtg~v~d----l~~I~~la~~~g~~lvvD~t~a~---- 187 (394)
T PRK09028 123 ----GFGIETTYYDPMIGEGIRELIRP---NTKVLFLESPGSITMEVQD----VPTLSRIAHEHDIVVMLDNTWAS---- 187 (394)
T ss_pred ----hcceEEEEECCCCHHHHHHhcCc---CceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCccc----
Confidence 00011234444467888888865 7999999999999999987 99999999999999999999972
Q ss_pred CCccccccCCCCccee--eccccccC--CCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHH
Q 012138 274 GRMLASDWEEVRPDMV--ILGKALGG--GVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAER 349 (470)
Q Consensus 274 G~~~~~~~~~~~pdi~--s~sK~l~g--G~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~ 349 (470)
+.. +.......|++ +..|.++| .. -.|+++.++++.+.+...........+|..+..+...|+.+. -.+++
T Consensus 188 p~~--~~Pl~~GaDivv~S~tK~l~Gh~d~-~~G~~~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~TL~--lR~~~ 262 (394)
T PRK09028 188 PIN--SRPFEMGVDISIQAATKYIVGHSDV-MLGTATANEKHWDQLREHSYLMGQCTSPDDVYLAMRGLRTLG--VRLAQ 262 (394)
T ss_pred ccc--CCccccCceEEEEeCCeEecCCCCE-EEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcHH--HHHHH
Confidence 111 22222334665 67799985 34 567777777776655422222223467777777666555442 23344
Q ss_pred HHHHHHHHHHHHHHHHh----hCCCce---------EEEeccceeEEEEeccCCCchhHHHHHHHHHHcCcee-------
Q 012138 350 SAHLGEELRQHLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA------- 409 (470)
Q Consensus 350 ~~~~~~~l~~~L~~l~~----~~p~~~---------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~------- 409 (470)
..+++..+.+.|++... .||... ....+.|.++.++++... .....+|.+.|+--.+.+
T Consensus 263 ~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~-~~~~~~f~~~l~l~~~~~slG~~~s 341 (394)
T PRK09028 263 HEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGD-PKAVTALVEGMQHFKMGFSWGGFES 341 (394)
T ss_pred HHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCC-HHHHHHHHHhCCcceEecccCCCcc
Confidence 44555555555554321 222110 112356889999886321 124456666554111111
Q ss_pred ---ccC-------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 410 ---KPT-------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 410 ---~~~-------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
.|. .++.|||++.+ |+.+++++-|.++|+
T Consensus 342 Lv~~p~~~~~~~~~~~~~~~~~liR~svGl----Ed~~dLi~Dl~~Al~ 386 (394)
T PRK09028 342 LILGVFGINKLRTATNWDFSKPLIRLHIGL----EDVDDLIADLEAGFE 386 (394)
T ss_pred eeECCCCcCccCchhhhcCCCCeEEEEeCc----CCHHHHHHHHHHHHH
Confidence 111 13679999655 456666666666665
No 298
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.77 E-value=1.4e-17 Score=165.33 Aligned_cols=285 Identities=12% Similarity=0.126 Sum_probs=179.3
Q ss_pred CCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCccccc
Q 012138 115 YNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIR 194 (470)
Q Consensus 115 ~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~ 194 (470)
.++...+++++++++++.+.+++++||+.|+.+++. +.+ +|+ .||+..+.|.+.............
T Consensus 45 ~~p~~~~le~~la~l~g~~~~l~~~sG~~al~~~l~-ll~---------~Gd-~Vl~~~~~y~~~~~~~~~~~~~~G--- 110 (378)
T TIGR01329 45 GNPTRTALESLLAKLDKADRAFAFSSGMAALDVITR-LLN---------NGD-EIIAGDDLYGGTDRLLTQVVPRSG--- 110 (378)
T ss_pred CChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHH-HhC---------CCC-EEEEcCCCchHHHHHHHHHHHHcC---
Confidence 456688999999999998999999999999887765 333 466 676767776543211100000000
Q ss_pred CCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccC
Q 012138 195 GFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG 274 (470)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G 274 (470)
..+..++..|++++++++++ ++++|++|.+.||+|.+.+ +++|.++|++||+++|+|++|... ...
T Consensus 111 ------~~v~~vd~~d~~~le~~i~~---~tklv~le~psnptg~v~d----l~~I~~la~~~g~~vivD~a~~~~-~~~ 176 (378)
T TIGR01329 111 ------VVVVHVDTTDLDKVKAALGP---KTKLVLLESPTNPLQKIVD----IRKISEMAHAQNALVVVDNTMMSP-LLC 176 (378)
T ss_pred ------cEEEEeCCCCHHHHHHhcCc---CceEEEEECCCCCCCeeec----HHHHHHHHHHcCCEEEEECCCccc-ccC
Confidence 11345555589999999875 7899999988999999998 999999999999999999998521 111
Q ss_pred CccccccCCCCccee--eccccccCC--CcceeEEEe-cHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHH
Q 012138 275 RMLASDWEEVRPDMV--ILGKALGGG--VIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAER 349 (470)
Q Consensus 275 ~~~~~~~~~~~pdi~--s~sK~l~gG--~~~ig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~ 349 (470)
.. . .++ .|++ +++|.++|+ . ..|++++ ++++.+.+...........++..++.+...++.+ +...++
T Consensus 177 ~~--l-~~g--~Di~v~S~tK~l~G~~~~-~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l~tl--~~R~e~ 248 (378)
T TIGR01329 177 NP--L-ELG--ADIVYHSATKFLAGHSDV-MAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLLLRGIKTL--AIRIEK 248 (378)
T ss_pred Ch--h-hcC--CcEEEEecceeccCCccc-eeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHHHccCCCH--HHHHHH
Confidence 11 1 123 3655 677998853 4 5788877 4555565554332223345666665554444333 223444
Q ss_pred HHHHHHHHHHHHHHHHh----hCCCce---------EEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCC---
Q 012138 350 SAHLGEELRQHLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--- 413 (470)
Q Consensus 350 ~~~~~~~l~~~L~~l~~----~~p~~~---------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~--- 413 (470)
...+...+.+.|++... .||..- ....+.|.++.+++. .. ..+.+|++.|...++.++-|+
T Consensus 249 ~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~-~~--~~~~~~~~~L~~~~i~~s~G~~~s 325 (378)
T TIGR01329 249 QQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETG-SV--ALSKRLVEATKLFSITVSFGSVNS 325 (378)
T ss_pred HHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEEC-CH--HHHHHHHHhCcCcccccCCCCCCc
Confidence 55555555555554211 122100 011356788889883 22 237788888865565543221
Q ss_pred ------------------------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 414 ------------------------DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 414 ------------------------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
++.+||++.+ |+.+++++-|+++|+
T Consensus 326 l~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 374 (378)
T TIGR01329 326 LISMPCFMSHASIPAEVREERGLPEDLVRLSVGI----EDVDDLISDLDIAFV 374 (378)
T ss_pred eeeCCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHH
Confidence 4689999554 667788888888776
No 299
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.77 E-value=1.1e-16 Score=158.34 Aligned_cols=280 Identities=15% Similarity=0.109 Sum_probs=172.8
Q ss_pred CCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCccc
Q 012138 113 AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEA 192 (470)
Q Consensus 113 ~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~ 192 (470)
.+.++...+|++.++++. .+.+++++||++|+..++..+.+ +|+ .||+..++|++........-...+
T Consensus 47 ry~~p~~~~Le~~lA~l~-~~~~v~~~sG~~Ai~~~l~all~---------~Gd-~Vl~~~~~y~~~~~~~~~~l~~~G- 114 (366)
T PRK07582 47 RASNPTWRALEAALGELE-GAEALVFPSGMAAITAVLRALLR---------PGD-TVVVPADGYYQVRALAREYLAPLG- 114 (366)
T ss_pred CCCCccHHHHHHHHHHHc-CCCEEEECCHHHHHHHHHHHhcC---------CCC-EEEEeCCCcHhHHHHHHHHHhcCe-
Confidence 356677899999999998 56777888999999988876643 465 777778888655332211000000
Q ss_pred ccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-CCc
Q 012138 193 IRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLA 271 (470)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g~g 271 (470)
..+..++.++.. + .+. +++++|+++.++||+|.+.+ +++|.++|+++|+++|+|++|. .++
T Consensus 115 --------~~v~~v~~~~~~--~-~~~---~~t~lV~le~p~NPtg~v~d----i~~I~~~a~~~g~~lvVD~t~~~~~~ 176 (366)
T PRK07582 115 --------VTVREAPTAGMA--E-AAL---AGADLVLAETPSNPGLDVCD----LAALAAAAHAAGALLVVDNTTATPLG 176 (366)
T ss_pred --------EEEEEECCCChH--H-Hhc---cCceEEEEECCCCCCCCccC----HHHHHHHHHHcCCEEEEECCCCCccc
Confidence 112344443322 1 222 27888888888999999987 9999999999999999999985 222
Q ss_pred ccCCccccccCCCCccee--eccccccC--CCcceeEEEe-cHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhH
Q 012138 272 RSGRMLASDWEEVRPDMV--ILGKALGG--GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKL 346 (470)
Q Consensus 272 ~~G~~~~~~~~~~~pdi~--s~sK~l~g--G~~~ig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~ 346 (470)
. .. .+ ...|++ +++|.++| |. ++|++++ ++++++.+...........+++.+..+...|+.+. -.
T Consensus 177 ~--~p--~~---~g~Divv~S~sK~l~G~~g~-~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~tl~--~R 246 (366)
T PRK07582 177 Q--RP--LE---LGADLVVASDTKALTGHSDL-LLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRSLGTLG--LR 246 (366)
T ss_pred c--Cc--hh---cCCcEEEecccccccCCCCe-eEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhccccHH--HH
Confidence 1 11 11 223555 78899974 66 8899887 47777766543322333467787777666665432 23
Q ss_pred HHHHHHHHHHHHHHHHHHHh----hCCCceE---------EEeccceeEEEEeccCCCchhHHHHHHHHHHcCceec-c-
Q 012138 347 AERSAHLGEELRQHLFKIQQ----QFPNYVK---------EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK-P- 411 (470)
Q Consensus 347 ~~~~~~~~~~l~~~L~~l~~----~~p~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~-~- 411 (470)
.++..+++..+.+.|++... .||.... ...+.|.++.++++. ..++.+.+...++... +
T Consensus 247 ~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~~------~~~~~~~~~~l~~~~~~~s 320 (366)
T PRK07582 247 FARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELAD------AAAAERFVAASRLVVAATS 320 (366)
T ss_pred HHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeCC------HHHHHHHHHhCCcceeccc
Confidence 45666677777777776432 2221111 112468889998852 2233333433344432 0
Q ss_pred -----------------CCCCEEEEecCCCCCHHHHHHHHHHHH
Q 012138 412 -----------------THDTIVRLTPPLSISSNELQEGSKALH 438 (470)
Q Consensus 412 -----------------~~~~~iR~~~~~~~t~e~i~~~~~~l~ 438 (470)
..++.||+++.+...++.|+++.++|.
T Consensus 321 ~G~~~sl~~~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al~ 364 (366)
T PRK07582 321 FGGVHTSADRRARWGDAVPEGFVRLSCGIEDTDDLVADLERALD 364 (366)
T ss_pred CCCccchhhhHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 114689999877655555555555543
No 300
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.77 E-value=8.4e-17 Score=159.34 Aligned_cols=301 Identities=19% Similarity=0.253 Sum_probs=189.7
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEc
Q 012138 94 PKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCC 173 (470)
Q Consensus 94 p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~ 173 (470)
.+..+++.+.++....+. ..+...++++.+++++|.++++.++|||.|+.+|++++-- ++|+ .|++..
T Consensus 5 ~e~~~~v~~~l~s~~~~~---~g~~~~~fE~~~a~~~g~~~~~~~~sgt~Al~~al~~l~~--------~~gd-eVi~p~ 72 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWLST---YGPYVEEFEKEFAEYFGVKYAVAVSSGTSALHLALRALGL--------GPGD-EVIVPA 72 (363)
T ss_dssp HHHHHHHHHHHHHTCCSS---SSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHTTG--------GTTS-EEEEES
T ss_pred HHHHHHHHHHHHhCCccC---CCHHHHHHHHHHHHHhCCCeEEEeCChhHHHHHHHHhcCC--------CcCc-eEecCC
Confidence 355667777777654332 1456789999999999999999999999999999997532 2455 777777
Q ss_pred cCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHH
Q 012138 174 GCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDL 253 (470)
Q Consensus 174 ~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l 253 (470)
.+|..........+..+.+ .+..++...+ |++++++++++ ++++|++.+.. |...+ +++|.++
T Consensus 73 ~t~~~~~~ai~~~G~~pv~----~Di~~~~~~i---d~~~~~~~i~~---~t~ai~~~h~~---G~~~d----~~~i~~~ 135 (363)
T PF01041_consen 73 YTFPATASAILWAGAEPVF----VDIDPETLNI---DPEALEKAITP---KTKAILVVHLF---GNPAD----MDAIRAI 135 (363)
T ss_dssp SS-THHHHHHHHTT-EEEE----E-BETTTSSB----HHHHHHHHHT---TEEEEEEE-GG---GB-------HHHHHHH
T ss_pred CcchHHHHHHHHhccEEEE----EeccCCcCCc---CHHHHHHHhcc---CccEEEEecCC---CCccc----HHHHHHH
Confidence 7776554444444433322 2332333344 89999999997 88999976634 55555 9999999
Q ss_pred HHhcCcEEEEecccc-CCcccCCccccccCCCCcceeecc----ccccCCCcceeEEEe-cHHHHhhcCcC---C-----
Q 012138 254 CSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDMVILG----KALGGGVIPVSAVLA-DKEVMLCIQPG---E----- 319 (470)
Q Consensus 254 ~~~~gillI~Dev~~-g~g~~G~~~~~~~~~~~pdi~s~s----K~l~gG~~~ig~v~~-~~~~~~~~~~~---~----- 319 (470)
|++||++||.|.+|+ |--..|+. .|-.-|+.+|| |.++.| -.|+++. ++++.+.++.. .
T Consensus 136 ~~~~~i~lIeD~a~a~g~~~~g~~-----~G~~gd~~~fSf~~~K~i~~g--eGG~v~~~~~~~~~~~~~~~~~g~~~~~ 208 (363)
T PF01041_consen 136 ARKHGIPLIEDAAQAFGARYKGRP-----VGSFGDIAIFSFHPTKIITTG--EGGAVVTNDPELAERARALRNHGRSRDA 208 (363)
T ss_dssp HHHTT-EEEEE-TTTTT-EETTEE-----TTSSSSEEEEESSTTSSS-SS--S-EEEEESTHHHHHHHHHHTBTTEETSE
T ss_pred HHHcCCcEEEccccccCceeCCEe-----ccCCCCceEecCCCCCCCcCC--CCeeEEecHHHHHHHhhhhhccCcCccc
Confidence 999999999999998 32223322 12222666665 888755 3456665 45555544321 1
Q ss_pred ---------ccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEe-------ccceeEE
Q 012138 320 ---------HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR-------GRGLFNA 383 (470)
Q Consensus 320 ---------~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~-------~~g~~~~ 383 (470)
.+..+..+.+.++.+.+.|+.+. ...++.+++..++.+.|..+.. +.... .....+.
T Consensus 209 ~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L~--~~~~~R~~~a~~y~~~L~~~~~-----~~~~~~~~~~~~~~~~~f~ 281 (363)
T PF01041_consen 209 FRRYRHELPPGYNFRMSELQAAIGLAQLKRLD--EIIARRRENAQRYREALAGIPG-----IKPPPIPDGAERSSYYRFP 281 (363)
T ss_dssp CSTTEESSSS--B-B-BHHHHHHHHHHHHTHH--HHHHHHHHHHHHHHHHHTTGTT-----EEEEGCGTTTEEBCESSEE
T ss_pred cccccccccCCcccccHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHhcCCC-----ccccccccccccccccccc
Confidence 23445688999999988887664 3566777778888888776532 21111 2222344
Q ss_pred EEeccCCCchhHHHHHHHHHHcCceeccCC----------------------------CCEEEEecCCCCCHHHHHHHHH
Q 012138 384 VEFDKTALPVSAYDICLKMKERGILAKPTH----------------------------DTIVRLTPPLSISSNELQEGSK 435 (470)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~----------------------------~~~iR~~~~~~~t~e~i~~~~~ 435 (470)
+.++... ..+..++.+.|.++||.+.+.. ...+.|-.....++++++++++
T Consensus 282 i~~~~~~-~~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~ 360 (363)
T PF01041_consen 282 IRLPDEA-LADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAE 360 (363)
T ss_dssp EEETCCG-CSTHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHH
T ss_pred ccccccc-cchHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhh
Confidence 4444321 1257889999999999876431 2345565556789999999998
Q ss_pred HHH
Q 012138 436 ALH 438 (470)
Q Consensus 436 ~l~ 438 (470)
.|+
T Consensus 361 ~ir 363 (363)
T PF01041_consen 361 AIR 363 (363)
T ss_dssp HHH
T ss_pred ccC
Confidence 874
No 301
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.77 E-value=3.5e-16 Score=158.61 Aligned_cols=313 Identities=14% Similarity=0.068 Sum_probs=193.2
Q ss_pred CCHHHHHHHHHHH-HHccccCC--CCC--CCcHHHHHH----HHhhhhCCCe-EE-e---cCChhHHHHHHHHHHHHhch
Q 012138 92 CHPKIMKALQEQA-EKLTLSSR--AFY--NDKFPVFAE----RLTSMFGYDM-VL-P---MNTGAEGVETALKLARKWGY 157 (470)
Q Consensus 92 ~~p~v~~a~~~~~-~~~~~~~~--~~~--~~~~~~l~~----~l~~~~~~~~-v~-~---~~sGteA~~~al~~~~~~~~ 157 (470)
..|.+.+++...+ .++..++. .++ .....++++ +..+.++.+. .+ + .+||+.||.+++..+..
T Consensus 46 ~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~--- 122 (475)
T PLN03226 46 TSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQ--- 122 (475)
T ss_pred CCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhCC---
Confidence 4578999888888 55544321 121 234555554 3444555443 22 2 38999999999988765
Q ss_pred hcccCCCCCcEEEEEccC---c--cccccchhcccCCcccccCCCCCCCCeeeecCC------CHHHHHHHHHhcCCCeE
Q 012138 158 VKKKFSIDEAIIVSCCGC---F--HGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG------DITALEKIFKESGDQIA 226 (470)
Q Consensus 158 ~~~~~~~g~~~ii~~~~~---y--hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~~~Le~~l~~~~~~~~ 226 (470)
+|+ .|+..+.. + |++......++....+ -+...+++| |+++|++++.+. +++
T Consensus 123 ------pgD-~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~--------~~~~~y~~~~~~g~iD~d~Le~~l~~~--~pk 185 (475)
T PLN03226 123 ------PHD-RIMGLDLPHGGHLSHGYQTDGKKISATSIY--------FESMPYRLDESTGLIDYDKLEKKAMLF--RPK 185 (475)
T ss_pred ------CCC-EEEECCCCcCcchhhhhhhcccccccceEE--------EEeeeeeecCCCCCcCHHHHHHHHhhc--CCe
Confidence 566 66664421 1 4443322222221111 001133445 999999999764 566
Q ss_pred EEEE-ccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-CCcccCCccccccCCCCccee--eccccccCCCcce
Q 012138 227 GFLF-EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDMV--ILGKALGGGVIPV 302 (470)
Q Consensus 227 ~vi~-epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g~g~~G~~~~~~~~~~~pdi~--s~sK~l~gG~~~i 302 (470)
.|++ ++ ..|...| +++|.++|++||++|++|++|. |+...+- . ....+ ..|++ +++|+|.|. +.
T Consensus 186 lIv~~~S---~~s~~~D----~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~-~-~~p~~-~~Div~~t~hK~L~GP--~G 253 (475)
T PLN03226 186 LIIAGAS---AYPRDWD----YARMRKIADKVGALLMCDMAHISGLVAAQE-A-ASPFE-YCDVVTTTTHKSLRGP--RG 253 (475)
T ss_pred EEEEecC---cCCCccC----HHHHHHHHHHcCCEEEEEchhhhCcccCCC-C-CCCCC-CCeEEEecCcccccCC--Cc
Confidence 6666 33 2556666 8999999999999999999998 5422211 1 11111 34665 667999764 33
Q ss_pred eEEEecHHHH-----------h---hcCcCC-ccCCCCCCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHH
Q 012138 303 SAVLADKEVM-----------L---CIQPGE-HGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKI 364 (470)
Q Consensus 303 g~v~~~~~~~-----------~---~~~~~~-~~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l 364 (470)
|++++++++. + .+.... ....-+.++..+++..++++.+.+ +.+.+++.++.++|.+.|.+.
T Consensus 254 g~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~ 333 (475)
T PLN03226 254 GMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSK 333 (475)
T ss_pred eEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhC
Confidence 6677777543 2 121111 111223567777788888998765 346888889999999988774
Q ss_pred HhhCCCceEEEe--ccceeEEEEeccCCCchhHHHHHHHHHHcCceeccC---------CCCEEEE----ecCCCCCHHH
Q 012138 365 QQQFPNYVKEVR--GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT---------HDTIVRL----TPPLSISSNE 429 (470)
Q Consensus 365 ~~~~p~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---------~~~~iR~----~~~~~~t~e~ 429 (470)
+ +..+. ....+..+.+... +.+..++.+.|.+.||++... .+..+|+ .....++++|
T Consensus 334 G------~~l~~~~t~~hi~lv~~~~~--gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d 405 (475)
T PLN03226 334 G------YKLVTGGTDNHLVLWDLRPL--GLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKD 405 (475)
T ss_pred C------CEEEcCCCCCCEEEEEccCC--CCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHH
Confidence 2 22222 1235555655322 236778888899999998642 2566888 3446688999
Q ss_pred HHHHHHHHHHHHhccc
Q 012138 430 LQEGSKALHDVLELDL 445 (470)
Q Consensus 430 i~~~~~~l~~~l~~~~ 445 (470)
++++.+.|.++++ ..
T Consensus 406 ~~~ia~~i~~~~~-~~ 420 (475)
T PLN03226 406 FEKVAEFLHRAVT-IA 420 (475)
T ss_pred HHHHHHHHHHHHH-Hh
Confidence 9999999999998 54
No 302
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.77 E-value=6.2e-16 Score=154.74 Aligned_cols=331 Identities=13% Similarity=0.049 Sum_probs=201.4
Q ss_pred CCHHHHHHHHHHHHHccccCCCC--CCCcHHHHHHHHhhhhCCC----eEEe--cCChhHHHHHHHHHHHHhchh---cc
Q 012138 92 CHPKIMKALQEQAEKLTLSSRAF--YNDKFPVFAERLTSMFGYD----MVLP--MNTGAEGVETALKLARKWGYV---KK 160 (470)
Q Consensus 92 ~~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~l~~~l~~~~~~~----~v~~--~~sGteA~~~al~~~~~~~~~---~~ 160 (470)
.+|++.+.+...+......+... ..+..++..+++++++|.+ .+.+ |+||||||..|+..++..... ..
T Consensus 53 ~~p~~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~ 132 (431)
T TIGR01788 53 MEPEARKLMDETINKNMIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAA 132 (431)
T ss_pred CCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhc
Confidence 57889999888886432222211 2245566778888888754 4555 799999999999877632111 01
Q ss_pred cCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccc
Q 012138 161 KFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVI 240 (470)
Q Consensus 161 ~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~ 240 (470)
+....+..|++.. .-|-+...+....+- ...+.+..++...+ |+++|++++++ ++.+|++...++++|.+
T Consensus 133 g~~~~~~~ii~s~-~~H~sv~ka~~~lg~---~v~~i~~d~~~~~v---d~~~L~~~i~~---~t~lV~~t~g~t~tG~i 202 (431)
T TIGR01788 133 GKPTDKPNLVMGS-NVQVCWEKFARYFDV---ELREVPMDPGRYVI---DPEQVVEAVDE---NTIGVVCILGTTYTGEY 202 (431)
T ss_pred CCCCCCcEEEEcC-cchHHHHHHHHHcCc---eeEEEecCCCceee---CHHHHHHHHhh---CCeEEEEEeCCCCCccc
Confidence 1000122344433 336665544433221 11112222211233 89999999986 68888888889999999
Q ss_pred cCChhhHHHHHHHHHhc------CcEEEEeccccCCcc---cCCc-cccccCCCCcceeecc--ccccCCCcceeEEEec
Q 012138 241 IPPDGYLKAVRDLCSKY------NILMIADEIQSGLAR---SGRM-LASDWEEVRPDMVILG--KALGGGVIPVSAVLAD 308 (470)
Q Consensus 241 ~~~~~~l~~l~~l~~~~------gillI~Dev~~g~g~---~G~~-~~~~~~~~~pdi~s~s--K~l~gG~~~ig~v~~~ 308 (470)
.| +++|.++|+++ |+++++|.+|+|+.. .++. +.+.. ...|.++++ |.+.+.. .+|+++.+
T Consensus 203 dp----i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~--~~~DSis~s~HK~~~~P~-g~G~l~~r 275 (431)
T TIGR01788 203 ED----VKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRL--PRVKSINVSGHKYGLVYP-GVGWVIWR 275 (431)
T ss_pred CC----HHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCC--CCceEEEECchhccCCCC-CcEEEEEe
Confidence 99 99999999999 999999999996421 1221 11221 134777776 6654555 88998876
Q ss_pred HH--HHhhcCc---CCc----cCCCCCCHH--HHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCceEE
Q 012138 309 KE--VMLCIQP---GEH----GSTFGGNPL--ASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKE 374 (470)
Q Consensus 309 ~~--~~~~~~~---~~~----~~t~~~~~~--~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~ 374 (470)
+. +.+.+.. ... ..++..+.. .....+..|..+.. +.+.++..++.+++.+.|+++. .+..
T Consensus 276 ~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~-----~~el 350 (431)
T TIGR01788 276 DEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLG-----PFEI 350 (431)
T ss_pred ChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCC-----CEEE
Confidence 54 3233211 110 012222211 22334444444443 4466677778888888877642 2332
Q ss_pred Ee--ccceeEEEEeccCC-CchhHHHHHHHHHHcCceec----cC---CCCEEEEecCCCCCHHHHHHHHHHHHHHHhcc
Q 012138 375 VR--GRGLFNAVEFDKTA-LPVSAYDICLKMKERGILAK----PT---HDTIVRLTPPLSISSNELQEGSKALHDVLELD 444 (470)
Q Consensus 375 ~~--~~g~~~~~~~~~~~-~~~~~~~~~~~l~~~Gv~~~----~~---~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 444 (470)
+. +...++.|.+.... ...+..++.++|.++|+.+. |. +.-++|++....++++.++++++.|++++. +
T Consensus 351 ~~~~~~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~-~ 429 (431)
T TIGR01788 351 ISDGSGIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALA-Y 429 (431)
T ss_pred eeCCCCceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHH-h
Confidence 22 34556666664311 01356789999999998642 22 235689987667899999999999999987 6
Q ss_pred c
Q 012138 445 L 445 (470)
Q Consensus 445 ~ 445 (470)
+
T Consensus 430 ~ 430 (431)
T TIGR01788 430 L 430 (431)
T ss_pred h
Confidence 5
No 303
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=3.6e-17 Score=164.27 Aligned_cols=291 Identities=17% Similarity=0.183 Sum_probs=180.4
Q ss_pred CCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccc
Q 012138 114 FYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAI 193 (470)
Q Consensus 114 ~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 193 (470)
..++....|++.++++.|.+..++++||++|+..++..+.. +|+ .|++..+.|++.............
T Consensus 61 ~~~p~~~~Le~~lA~leg~~~al~~~sG~~Ai~~al~~ll~---------~GD-~Vlv~~~~y~~t~~~~~~~~~~~G-- 128 (431)
T PRK08248 61 IMNPTTDVFEKRIAALEGGIGALAVSSGQAAITYSILNIAS---------AGD-EIVSSSSLYGGTYNLFAHTLPKLG-- 128 (431)
T ss_pred CCCchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhC---------CCC-EEEEccCchhhHHHHHHHHHHhCC--
Confidence 45677899999999999999999999999999999986654 466 677777776543221111000000
Q ss_pred cCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCccc
Q 012138 194 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS 273 (470)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~ 273 (470)
..+..++..|++++++++++ ++++|+++.++||+|.+.+ +++|.++|++||+++|+|++++. +..
T Consensus 129 -------v~v~~vd~~d~e~l~~ai~~---~tklV~l~sp~NPtG~v~d----i~~I~~la~~~gi~vIvD~t~a~-~~~ 193 (431)
T PRK08248 129 -------ITVKFVDPSDPENFEAAITD---KTKALFAETIGNPKGDVLD----IEAVAAIAHEHGIPLIVDNTFAS-PYL 193 (431)
T ss_pred -------EEEEEECCCCHHHHHHhcCC---CCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEeCCCCc-ccc
Confidence 11345555689999999875 7899998888999999998 99999999999999999999861 111
Q ss_pred CCccccccCCCCccee--eccccccC-CCcceeEEEec-HHHH-----------------------h----------hcC
Q 012138 274 GRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLAD-KEVM-----------------------L----------CIQ 316 (470)
Q Consensus 274 G~~~~~~~~~~~pdi~--s~sK~l~g-G~~~ig~v~~~-~~~~-----------------------~----------~~~ 316 (470)
... . .++ .|++ +++|.++| |. ++|+++.. .+.. + ...
T Consensus 194 ~~p--l-~~g--aDivv~S~tK~lgg~g~-~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (431)
T PRK08248 194 LRP--I-EHG--ADIVVHSATKFIGGHGT-SIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARV 267 (431)
T ss_pred CCh--h-HcC--CCEEEEcCccccCCCCC-ceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHH
Confidence 111 1 133 3655 67799985 65 77776653 2210 0 000
Q ss_pred cCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh----hCCCceE---------EE-eccceeE
Q 012138 317 PGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYVK---------EV-RGRGLFN 382 (470)
Q Consensus 317 ~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~----~~p~~~~---------~~-~~~g~~~ 382 (470)
..........+|..++.....|+.+ +-..++..+++..+.+.|++... .||.... .. .+.|.++
T Consensus 268 ~~~~~~G~~l~p~~a~l~~rgl~tl--~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~ 345 (431)
T PRK08248 268 QLLRDLGAALSPFNSFLLLQGLETL--HLRMERHSENALAVAKFLEEHEAVEWVSYPGLPSHPSYELAKKYLPKGQGAIL 345 (431)
T ss_pred HHHHhcCCCCCHHHHHHHhcCcCcH--HHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEE
Confidence 0000112345666666665555433 22445566666677777766431 2221100 11 3458899
Q ss_pred EEEeccCCCchhHHHHHHHHHHcCceec----------cC-----------------CCCEEEEecCCCCCHHHHHHHHH
Q 012138 383 AVEFDKTALPVSAYDICLKMKERGILAK----------PT-----------------HDTIVRLTPPLSISSNELQEGSK 435 (470)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----------~~-----------------~~~~iR~~~~~~~t~e~i~~~~~ 435 (470)
.+++.... ..+.+|.+.|.--.+.++ |. .++.|||++.+ |+.+++++
T Consensus 346 sf~l~~~~--~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~dL~~ 419 (431)
T PRK08248 346 TFGIKGGV--EAGKKLIDSVKLFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGVTPGLVRLSVGT----EAIDDILD 419 (431)
T ss_pred EEEecCCH--HHHHHHHHhCCcceeccccCCCCeeeeCCCcCccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHH
Confidence 99885421 245556665542111111 11 15689999554 67778888
Q ss_pred HHHHHHhcccC
Q 012138 436 ALHDVLELDLP 446 (470)
Q Consensus 436 ~l~~~l~~~~~ 446 (470)
-|.++|+ ..+
T Consensus 420 Dl~~Al~-~~~ 429 (431)
T PRK08248 420 DLRQAIR-QSQ 429 (431)
T ss_pred HHHHHHH-hhh
Confidence 8888877 543
No 304
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.76 E-value=7.9e-17 Score=162.09 Aligned_cols=288 Identities=15% Similarity=0.183 Sum_probs=181.1
Q ss_pred CCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccc
Q 012138 114 FYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAI 193 (470)
Q Consensus 114 ~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 193 (470)
..++...+|++.++++.|.+.+++++||++|+.++++.+.+ +|+ .||+..+.|++...........
T Consensus 60 ~~~p~~~~le~~lA~l~g~~~al~~~SG~~Ai~~al~all~---------pGd-~VIv~~~~y~~t~~~~~~~~~~---- 125 (427)
T PRK05994 60 ITNPTNAVLEERVAALEGGTAALAVASGHAAQFLVFHTLLQ---------PGD-EFIAARKLYGGSINQFGHAFKS---- 125 (427)
T ss_pred CCCccHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHhC---------CCC-EEEEecCcchhHHHHHHHHHHh----
Confidence 44667889999999999988999999999999999987754 565 7778888876542211000000
Q ss_pred cCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCccc
Q 012138 194 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS 273 (470)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~ 273 (470)
....+..++.+|++++++++++ ++++|++|.++||+|.+.| +++|.++|++||+++|+|++|+.
T Consensus 126 -----~G~~v~~vd~~d~~~l~~ai~~---~tklV~vesp~NptG~v~d----l~~I~~la~~~gi~livD~a~a~---- 189 (427)
T PRK05994 126 -----FGWQVRWADADDPASFERAITP---RTKAIFIESIANPGGTVTD----IAAIAEVAHRAGLPLIVDNTLAS---- 189 (427)
T ss_pred -----cCcEEEEECCCCHHHHHHhcCc---CCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCccc----
Confidence 0011345555689999999875 7899999999999999998 99999999999999999999972
Q ss_pred CCccccccCCCCccee--eccccccC-CCcceeEEEec-HH-----------------------HHhhcC-------c--
Q 012138 274 GRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLAD-KE-----------------------VMLCIQ-------P-- 317 (470)
Q Consensus 274 G~~~~~~~~~~~pdi~--s~sK~l~g-G~~~ig~v~~~-~~-----------------------~~~~~~-------~-- 317 (470)
+.. .......+|++ +++|.++| |- .+|+++.. .. +.+.+. .
T Consensus 190 ~~~--~~pl~~gaDivv~S~tK~lgg~~~-~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (427)
T PRK05994 190 PYL--IRPIEHGADIVVHSLTKFLGGHGN-SMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARV 266 (427)
T ss_pred ccc--CCccccCCcEEEEcCccccCCCCC-cEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHH
Confidence 111 22223455766 67799985 32 56655542 11 111000 0
Q ss_pred -CCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh----hCCCceE---------E-EeccceeE
Q 012138 318 -GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYVK---------E-VRGRGLFN 382 (470)
Q Consensus 318 -~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~----~~p~~~~---------~-~~~~g~~~ 382 (470)
.........+|..++.+...|+.+. ...++..+++..+.+.|++... .||.... . ..+.|.++
T Consensus 267 ~~~~~~G~~~~~~~A~l~~~~l~tL~--~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~~~~~~~~~~~~~~~g~g~~~ 344 (427)
T PRK05994 267 LGLRDLGPAISPFNAFLILTGIETLP--LRMQRHSDNALAVAEWLKGHPKVSWVNYAGLPDDPYHALAQKYSPKGAGAVF 344 (427)
T ss_pred HHHHhcCCCCCHHHHHHHHcCcccHH--HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhcCCCceEEE
Confidence 0011112367777777766665543 3556666677777777765431 2221100 1 13568889
Q ss_pred EEEeccCCCchhHHHHHHHHHHcCceec----------cC-----------------CCCEEEEecCCCCCHHHHHHHHH
Q 012138 383 AVEFDKTALPVSAYDICLKMKERGILAK----------PT-----------------HDTIVRLTPPLSISSNELQEGSK 435 (470)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----------~~-----------------~~~~iR~~~~~~~t~e~i~~~~~ 435 (470)
.+++.... ....+|++.|.--.+.++ |. .++.|||++.+ |+.+.+++
T Consensus 345 sf~l~~~~--~~~~~~~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----E~~~dli~ 418 (427)
T PRK05994 345 TFGLKGGY--EAGVKLVSSLKLFSHLANIGDTRSLVIHPASTTHRQLTDEQKVAAGAGPDVVRLSIGI----EDVDDIIA 418 (427)
T ss_pred EEEecCCH--HHHHHHHHhCCcceeccccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCcEEEEecc----CCHHHHHH
Confidence 99885321 244556655532111111 11 14689999554 56777777
Q ss_pred HHHHHHh
Q 012138 436 ALHDVLE 442 (470)
Q Consensus 436 ~l~~~l~ 442 (470)
-|.++|+
T Consensus 419 dl~~Al~ 425 (427)
T PRK05994 419 DLEQALA 425 (427)
T ss_pred HHHHHHh
Confidence 7777775
No 305
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.76 E-value=8.6e-17 Score=160.40 Aligned_cols=285 Identities=11% Similarity=0.118 Sum_probs=182.0
Q ss_pred CCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccch---hcccCCcc
Q 012138 115 YNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAA---ISMSCDNE 191 (470)
Q Consensus 115 ~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~---~~~~~~~~ 191 (470)
.++...+|++.++++.+.+.++.++||+.|+.+++..+.. +|+ .||+..+.|.+..... +..-+
T Consensus 59 ~nPtv~~lE~~la~leg~~~av~~~SG~aAi~~al~all~---------~GD-~VI~~~~~Y~~T~~~~~~~l~~~G--- 125 (432)
T PRK06702 59 GNPTLAAFEQKLAELEGGVGAVATASGQAAIMLAVLNICS---------SGD-HLLCSSTVYGGTFNLFGVSLRKLG--- 125 (432)
T ss_pred CCcHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhcC---------CCC-EEEECCCchHHHHHHHHHHHHHCC---
Confidence 3677899999999999988999999999999999986654 566 7788888875433221 11111
Q ss_pred cccCCCCCCCCeeeecCC-CHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCC
Q 012138 192 AIRGFGPLLPGHLKVDFG-DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 270 (470)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~-d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~ 270 (470)
..+.++..+ |+++++++|++ +|++|++|.+.||++.+.+ +++|.++|++||+++|+|++++
T Consensus 126 ---------i~v~~vd~~~d~~~l~~~I~~---~Tk~I~~e~pgnP~~~v~D----i~~I~~iA~~~gi~livD~T~~-- 187 (432)
T PRK06702 126 ---------IDVTFFNPNLTADEIVALAND---KTKLVYAESLGNPAMNVLN----FKEFSDAAKELEVPFIVDNTLA-- 187 (432)
T ss_pred ---------CEEEEECCCCCHHHHHHhCCc---CCeEEEEEcCCCccccccC----HHHHHHHHHHcCCEEEEECCCC--
Confidence 112344443 88999999986 8999999999999999998 9999999999999999999974
Q ss_pred cccCCccccccCCCCccee--eccccccCCCcceeEEEe-cH----------HHHh---------------------hcC
Q 012138 271 ARSGRMLASDWEEVRPDMV--ILGKALGGGVIPVSAVLA-DK----------EVML---------------------CIQ 316 (470)
Q Consensus 271 g~~G~~~~~~~~~~~pdi~--s~sK~l~gG~~~ig~v~~-~~----------~~~~---------------------~~~ 316 (470)
+ ...+..+..-.|++ |++|.++|--.-+|.++. .. ++.+ ..+
T Consensus 188 --t--P~~~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (432)
T PRK06702 188 --T--PYLCQAFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKAR 263 (432)
T ss_pred --c--hhhCChhhcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHH
Confidence 1 11123222334654 888988741113333222 11 1110 000
Q ss_pred -cCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh----hCCCceE---------EE-ecccee
Q 012138 317 -PGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYVK---------EV-RGRGLF 381 (470)
Q Consensus 317 -~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~----~~p~~~~---------~~-~~~g~~ 381 (470)
..........+|+.+..+...|+.+. -..++..++...+.+.|++... .||.... .. .+.|.+
T Consensus 264 ~~~~~~~g~~~sp~~a~l~~rgL~Tl~--lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~~g~gg~ 341 (432)
T PRK06702 264 VQLLRDYGNCMSPFNAYISNIGLETLH--LRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASGV 341 (432)
T ss_pred HHHHHHccCCCCHHHHHHHHhccCcHH--HHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceE
Confidence 01122334688888888877776543 3445556667777777765321 2221111 11 356788
Q ss_pred EEEEeccCCCchhHHHHHHHHHHcCceec----------cC-----------------CCCEEEEecCCCCCHHHHHHHH
Q 012138 382 NAVEFDKTALPVSAYDICLKMKERGILAK----------PT-----------------HDTIVRLTPPLSISSNELQEGS 434 (470)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----------~~-----------------~~~~iR~~~~~~~t~e~i~~~~ 434 (470)
+.+++.... ..+.+|++.|+--.+.++ |. .++.|||++. -|+.+.++
T Consensus 342 ~sf~l~~~~--~~~~~f~~~l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlSvG----lEd~eDLi 415 (432)
T PRK06702 342 LTFGIKGGL--EAAKEFIANVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVG----IEDVSDII 415 (432)
T ss_pred EEEEecCCH--HHHHHHHHhCccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEEec----cCCHHHHH
Confidence 999885321 245566665532111111 11 1468999954 36788999
Q ss_pred HHHHHHHh
Q 012138 435 KALHDVLE 442 (470)
Q Consensus 435 ~~l~~~l~ 442 (470)
+-|.++|+
T Consensus 416 ~Dl~~Al~ 423 (432)
T PRK06702 416 ADLEAALV 423 (432)
T ss_pred HHHHHHHh
Confidence 99999988
No 306
>PLN02509 cystathionine beta-lyase
Probab=99.76 E-value=8e-17 Score=162.08 Aligned_cols=283 Identities=12% Similarity=0.120 Sum_probs=179.2
Q ss_pred CCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccc---hhcccCCcc
Q 012138 115 YNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLA---AISMSCDNE 191 (470)
Q Consensus 115 ~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~---~~~~~~~~~ 191 (470)
.++.+.+++++++++.+.+.+++++||+.|+.+++. +.+ +|+ .||+..+.|.+.... .+...+.
T Consensus 131 gnpt~~aLE~~lA~leg~e~ai~~~SG~aAi~~il~-ll~---------~GD-~VI~~~~~y~~t~~ll~~~l~~~G~-- 197 (464)
T PLN02509 131 GNPTRDALESLLAKLDKADRAFCFTSGMAALSAVTH-LIK---------NGE-EIVAGDDVYGGSDRLLSQVVPRSGV-- 197 (464)
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEeCcHHHHHHHHHH-HhC---------CCC-EEEEcCCchhhHHHHHHHHHHHCCe--
Confidence 356789999999999999999999999998865553 333 466 677788887553211 1111111
Q ss_pred cccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCc
Q 012138 192 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 271 (470)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g 271 (470)
.+..++..|+++++++++. ++++|++|.++||+|.+.+ +++|.++|++||+++|+|++|.. +
T Consensus 198 ----------~v~~vd~~d~e~l~~ai~~---~TklV~lesPsNPtG~i~D----l~~I~~lAk~~g~~lIVD~A~a~-~ 259 (464)
T PLN02509 198 ----------VVKRVNTTNLDEVAAAIGP---QTKLVWLESPTNPRQQISD----IRKIAEMAHAQGALVLVDNSIMS-P 259 (464)
T ss_pred ----------EEEEeCCCCHHHHHHhCCc---CCeEEEEECCCCCCCCHHH----HHHHHHHHHHcCCEEEEECCccc-c
Confidence 1234455689999988865 7899999999999999987 99999999999999999999862 1
Q ss_pred ccCCccccccCCCCccee--eccccccC-CCcceeEEEe-cHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHH
Q 012138 272 RSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLA 347 (470)
Q Consensus 272 ~~G~~~~~~~~~~~pdi~--s~sK~l~g-G~~~ig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~ 347 (470)
..+.. .+...|++ +++|.++| |-.-.|++++ ++.+.+.+...........+|..++.+...|+.+. ...
T Consensus 260 ~~~~p-----l~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A~l~lr~L~tL~--~R~ 332 (464)
T PLN02509 260 VLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTMA--LRI 332 (464)
T ss_pred ccCCh-----hhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHHHHHHHhhhhhHH--HHH
Confidence 12221 12234665 67799885 3103555665 44444433221111122357888888888777663 355
Q ss_pred HHHHHHHHHHHHHHHHHHh----hCCCce---------EEEeccceeEEEEeccCCCchhHHHHHHHHHH--cCcee---
Q 012138 348 ERSAHLGEELRQHLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKE--RGILA--- 409 (470)
Q Consensus 348 ~~~~~~~~~l~~~L~~l~~----~~p~~~---------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~--~Gv~~--- 409 (470)
++..+++.++.+.|++... .||... ....+.|.++.+.+... ..+..|++.|.- .++-.
T Consensus 333 ~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~~~---~~~~~f~~~l~l~~~a~slG~~ 409 (464)
T PLN02509 333 EKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSV---ALSKHLVETTKYFSIAVSFGSV 409 (464)
T ss_pred HHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeCCH---HHHHHHHHcCCcceEcccCCCC
Confidence 6667777777777765321 222110 11235688888877321 245566665541 11111
Q ss_pred -----ccC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 410 -----KPT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 410 -----~~~-----------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
.|. .++.|||++.+ |+++++++-|+++|+
T Consensus 410 ~SLi~~p~~~sh~~~~~~~~~~~Gi~~~liRlSvGl----E~~~DLi~Dl~~Al~ 460 (464)
T PLN02509 410 KSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI----EDVDDLISDLDIAFR 460 (464)
T ss_pred CceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHc
Confidence 011 15789999544 678888888888876
No 307
>PRK05939 hypothetical protein; Provisional
Probab=99.76 E-value=4.5e-17 Score=162.19 Aligned_cols=286 Identities=14% Similarity=0.155 Sum_probs=173.3
Q ss_pred CCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCcccccc--chhcccCCcc
Q 012138 114 FYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTL--AAISMSCDNE 191 (470)
Q Consensus 114 ~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~--~~~~~~~~~~ 191 (470)
+.++...+|++.++++.|.+..+.++||+.|+..++..+.+ +|+ .||+..+.|.+... ..+...+
T Consensus 44 ~g~p~~~~lE~~la~leg~~~~v~~ssG~~Ai~~~l~all~---------~Gd-~Vv~~~~~y~~t~~~~~~l~~~G--- 110 (397)
T PRK05939 44 QGTPTTAALEAKITKMEGGVGTVCFATGMAAIAAVFLTLLR---------AGD-HLVSSQFLFGNTNSLFGTLRGLG--- 110 (397)
T ss_pred CCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHcC---------CCC-EEEECCCccccHHHHHHHHHhcC---
Confidence 45677899999999999988888999999999999987654 566 67777776643321 1111111
Q ss_pred cccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCc
Q 012138 192 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 271 (470)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g 271 (470)
..+..++..|++++++++++ ++++|++|.++||+|.+.+ +++|.++|++||+++|+|++|+..
T Consensus 111 ---------~~v~~v~~~d~e~l~~~l~~---~tklV~vesp~NptG~v~d----l~~I~~la~~~gi~livD~t~a~~- 173 (397)
T PRK05939 111 ---------VEVTMVDATDVQNVAAAIRP---NTRMVFVETIANPGTQVAD----LAGIGALCRERGLLYVVDNTMTSP- 173 (397)
T ss_pred ---------CEEEEECCCCHHHHHHhCCC---CCeEEEEECCCCCCCCHHh----HHHHHHHHHHcCCEEEEECCcccc-
Confidence 11345555689999999875 7899999999999999987 999999999999999999998621
Q ss_pred ccCCccccccCCCCcceeeccccccC-CCcceeEEEecHHH---------Hhh-------------cCcC-CccCCCCCC
Q 012138 272 RSGRMLASDWEEVRPDMVILGKALGG-GVIPVSAVLADKEV---------MLC-------------IQPG-EHGSTFGGN 327 (470)
Q Consensus 272 ~~G~~~~~~~~~~~pdi~s~sK~l~g-G~~~ig~v~~~~~~---------~~~-------------~~~~-~~~~t~~~~ 327 (470)
..+.....|.+..+.+++|.++| |. .+|+++..... .+. ++.. .....-..+
T Consensus 174 ---~~~~~~~~gaDivv~S~sK~~~g~g~-~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 249 (397)
T PRK05939 174 ---WLFRPKDVGASLVINSLSKYIAGHGN-ALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLS 249 (397)
T ss_pred ---cccCccccCCEEEEecCeecccCCCC-eEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCC
Confidence 11111112332233488899996 66 78887663211 110 1000 000111245
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh----hCCCce---------EEEeccceeEEEEeccCCCchh
Q 012138 328 PLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVS 394 (470)
Q Consensus 328 ~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~----~~p~~~---------~~~~~~g~~~~~~~~~~~~~~~ 394 (470)
|..+......++.+. -..++..+++..+.+.|+.... .||... ....+.|.++.+++... ..
T Consensus 250 p~~a~l~~rgl~tl~--~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~~---~~ 324 (397)
T PRK05939 250 SEAAHRIAIGAETLA--LRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELADG---ID 324 (397)
T ss_pred HHHHHHHHcCcCcHH--HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCCH---HH
Confidence 555554444444332 1223333355555555554221 222110 01246788999988632 24
Q ss_pred HHHHHHHHHH--cCcee--------ccC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 395 AYDICLKMKE--RGILA--------KPT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 395 ~~~~~~~l~~--~Gv~~--------~~~-----------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
..+|.+.|+- .+... .|. .++.|||++.+ |+++.+++-|.++|+
T Consensus 325 ~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svGl----Ed~~dLi~dl~~Al~ 395 (397)
T PRK05939 325 CFDFLNRLKLVIKATHLGDTRTLVIPVAPTIYYEMGAERRASMGIADSLIRVSVGI----EDEADLIADFEQALD 395 (397)
T ss_pred HHHHHHhCCcceEccCCCCCCeeeecCcccccccCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHHh
Confidence 5556665542 12111 111 14689999554 577888888887775
No 308
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.75 E-value=7.7e-16 Score=165.64 Aligned_cols=302 Identities=14% Similarity=0.142 Sum_probs=197.0
Q ss_pred HHHHHHHHhhhhCCCeEEecCChh----HHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCccccc
Q 012138 119 FPVFAERLTSMFGYDMVLPMNTGA----EGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIR 194 (470)
Q Consensus 119 ~~~l~~~l~~~~~~~~v~~~~sGt----eA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~ 194 (470)
..++++++++++|.+.|.|+++++ +|+..+++...+ .+|. ..+++||+.. +-||.......+.+-...
T Consensus 570 ~~~~r~~la~i~g~~~v~f~pnaga~ge~a~~~vi~~~~~----~~Gd-~~r~~vli~~-~aH~sn~a~a~~~G~~vv-- 641 (993)
T PLN02414 570 FEDLGDLLCEITGFDSFSLQPNAGAAGEYAGLMVIRAYHL----SRGD-HHRNVCIIPV-SAHGTNPASAAMCGMKIV-- 641 (993)
T ss_pred HHHHHHHHHHHhCCCeEEEcCCCcHHHHHHHHHHHHHHHh----ccCC-CCCCEEEeCC-CcCccCHHHHHHCCCEEE--
Confidence 457889999999999999998877 677777765543 1110 0123455444 449887766555332111
Q ss_pred CCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-CC-cc
Q 012138 195 GFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GL-AR 272 (470)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g~-g~ 272 (470)
+.+...+ ..+ |+++|+++++++.+++++|++...+|-+|...| +++|.++|+++|+++++|.+|. +. +.
T Consensus 642 -~v~~d~~-G~v---Dle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~----I~eI~~iah~~Galv~vDgAq~~a~~~l 712 (993)
T PLN02414 642 -VVGTDAK-GNI---NIEELRKAAEAHKDNLAALMVTYPSTHGVYEEG----IDEICDIIHDNGGQVYMDGANMNAQVGL 712 (993)
T ss_pred -EeccCCC-CCc---CHHHHHHHHhccCCCeEEEEEECCCccccccch----HHHHHHHHHHcCCEEEEEecCHHhccCc
Confidence 1111111 122 899999999865457899998887999999998 9999999999999999999996 22 11
Q ss_pred cCCccccccCCCCcceeec--ccccc-----CCCcceeEEEecHHHHhhcCcCC-----------c-c--CCCC----CC
Q 012138 273 SGRMLASDWEEVRPDMVIL--GKALG-----GGVIPVSAVLADKEVMLCIQPGE-----------H-G--STFG----GN 327 (470)
Q Consensus 273 ~G~~~~~~~~~~~pdi~s~--sK~l~-----gG~~~ig~v~~~~~~~~~~~~~~-----------~-~--~t~~----~~ 327 (470)
. ....+ ..|++.+ .|+|+ ||. .+|.+.+++++...+.... . . .+.. ++
T Consensus 713 ~----~p~~~--GaD~~~~s~HK~f~~P~G~GGP-g~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~ 785 (993)
T PLN02414 713 T----SPGFI--GADVCHLNLHKTFCIPHGGGGP-GMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGS 785 (993)
T ss_pred C----Ccccc--CCCEEEecCCccCCcCcccCCC-CeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhh
Confidence 1 01123 3477766 48766 555 7899999988776653210 0 0 1111 23
Q ss_pred HHHHHHHHHHHHHHhhhhH---HHHHHHHHHHHHHHHHHHHhhCCCceEEEeccce-eEEEEeccCC----CchhHHHHH
Q 012138 328 PLASAVAIASLDVIRDEKL---AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL-FNAVEFDKTA----LPVSAYDIC 399 (470)
Q Consensus 328 ~~~~aaa~a~l~~~~~~~~---~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~-~~~~~~~~~~----~~~~~~~~~ 399 (470)
.+.+.++...++.+..+.+ .++...++++++++|.+. ++ +....+.|. +--+.++... .+.+..++.
T Consensus 786 al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~---~~--~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~ 860 (993)
T PLN02414 786 ALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGH---YP--VLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVA 860 (993)
T ss_pred HHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhh---CC--ccccCCCCCeeeeEEEeccccccccCCCHHHHH
Confidence 3444555566666666666 677778899999988762 21 111111221 1111111111 124568899
Q ss_pred HHHHHcCceeccC---CCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccCCCCC
Q 012138 400 LKMKERGILAKPT---HDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRK 450 (470)
Q Consensus 400 ~~l~~~Gv~~~~~---~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~~~~ 450 (470)
++|.+.||..... ..+.+|++|....|++|||+++++|..+.. |+.++..
T Consensus 861 krL~d~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~-e~~~~~~ 913 (993)
T PLN02414 861 KRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIRE-EIADIEN 913 (993)
T ss_pred HHHHHcCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHH-HHHHHhc
Confidence 9999989976421 277899999999999999999999999998 8876444
No 309
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.75 E-value=7.7e-17 Score=161.85 Aligned_cols=288 Identities=16% Similarity=0.187 Sum_probs=177.1
Q ss_pred CCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhccc-CCccc
Q 012138 114 FYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMS-CDNEA 192 (470)
Q Consensus 114 ~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~-~~~~~ 192 (470)
+.++...++++.++++.|.+.+++++||++|+.+++..+.. +|+ .||+....|++. ...+... ...+
T Consensus 61 ~~~p~~~~le~~lA~l~g~~~av~~sSGt~Al~~al~~ll~---------~Gd-~Vi~~~~~y~~t-~~~~~~~l~~~G- 128 (433)
T PRK08134 61 ISNPTVAVLEERVAALEGGVGAIATASGQAALHLAIATLMG---------AGS-HIVASSALYGGS-HNLLHYTLRRFG- 128 (433)
T ss_pred CcChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhC---------CCC-EEEEeCCccHHH-HHHHHHHHhhCC-
Confidence 45677899999999999988899999999999999886643 455 677777776543 2221110 0000
Q ss_pred ccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-CCc
Q 012138 193 IRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLA 271 (470)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g~g 271 (470)
..+..++.+|+++|+++|++ +|++|+++.+.||+|.+.| +++|.++|++||+++|+|.+|+ ++.
T Consensus 129 --------i~v~~vd~~d~~~l~~~i~~---~TklV~~e~~~np~g~v~D----i~~I~~la~~~gi~livD~t~a~~~~ 193 (433)
T PRK08134 129 --------IETTFVKPGDIDGWRAAIRP---NTRLLFGETLGNPGLEVLD----IPTVAAIAHEAGVPLLVDSTFTTPYL 193 (433)
T ss_pred --------eEEEEECCCCHHHHHHhcCC---CCeEEEEECCCcccCcccC----HHHHHHHHHHcCCEEEEECCCccccc
Confidence 11345555589999999986 8999999999999999998 9999999999999999999997 221
Q ss_pred ccCCccccccCCCCccee--eccccccC-CCcceeEEEec-HHH-------HhhcCc-----------------------
Q 012138 272 RSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLAD-KEV-------MLCIQP----------------------- 317 (470)
Q Consensus 272 ~~G~~~~~~~~~~~pdi~--s~sK~l~g-G~~~ig~v~~~-~~~-------~~~~~~----------------------- 317 (470)
. .......|++ +..|.++| |- .+|.++.. ..+ ...+.+
T Consensus 194 -----~--~pl~~GaD~vv~S~tK~l~g~g~-~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 265 (433)
T PRK08134 194 -----L--RPFEHGADLVYHSATKFLGGHGT-AIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRA 265 (433)
T ss_pred -----C--CchhcCCCEEEeccccccCCCCC-ceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHH
Confidence 1 1112234666 55588874 43 35554432 110 000000
Q ss_pred ---CCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh----hCCCceE---------EE-eccce
Q 012138 318 ---GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYVK---------EV-RGRGL 380 (470)
Q Consensus 318 ---~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~----~~p~~~~---------~~-~~~g~ 380 (470)
.........++..++.+...|+.+ +...++..+++.++.+.|++... .||.... .. .+.|.
T Consensus 266 ~~~~~~~~G~~ls~~~A~l~~~gL~tl--~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~~g~gg 343 (433)
T PRK08134 266 RREGLRDFGACLSPMNAWQLLQGIETL--PLRMERHVANTRKVVAFLASHPAVARVAHPELESHPDHALAKRLLPRGAGS 343 (433)
T ss_pred HHHHHHhcCCCCCHHHHHHHhcCCCcH--HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCce
Confidence 001111235666666665555443 33455556666666666665321 2231110 11 35688
Q ss_pred eEEEEeccCCCchhHHHHHHHHHHcCcee----------ccC-----------------CCCEEEEecCCCCCHHHHHHH
Q 012138 381 FNAVEFDKTALPVSAYDICLKMKERGILA----------KPT-----------------HDTIVRLTPPLSISSNELQEG 433 (470)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~----------~~~-----------------~~~~iR~~~~~~~t~e~i~~~ 433 (470)
++.+++.... ..+.+|.+.|.--.+.. .|. .++.|||++.+ |+.+++
T Consensus 344 ~~s~~l~~~~--~~~~~f~~~l~l~~~~~slG~~~sL~~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGl----E~~~dl 417 (433)
T PRK08134 344 VFSFDLKGGR--AAGRKFIESLKLFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGIGEGTIRLSIGL----EDADDL 417 (433)
T ss_pred EEEEEecCCH--HHHHHHHHhCCcceeccccCCCCceeeCCCccCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHH
Confidence 9999886321 24556666554211111 111 15789999554 567788
Q ss_pred HHHHHHHHhccc
Q 012138 434 SKALHDVLELDL 445 (470)
Q Consensus 434 ~~~l~~~l~~~~ 445 (470)
++-|.++|+ ..
T Consensus 418 i~dl~~Al~-~~ 428 (433)
T PRK08134 418 IDDLKRALK-AA 428 (433)
T ss_pred HHHHHHHHH-hh
Confidence 888888877 54
No 310
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.75 E-value=7.7e-17 Score=160.63 Aligned_cols=284 Identities=13% Similarity=0.088 Sum_probs=172.5
Q ss_pred CCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccc
Q 012138 114 FYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAI 193 (470)
Q Consensus 114 ~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 193 (470)
..++...++++.++++.|.+..+.+++|+.|+..++. +.. +|+ .||+..+.|++............+
T Consensus 51 ~~~p~~~~le~~lA~l~g~~~~v~~~sG~~ai~~~l~-~l~---------~Gd-~Vlv~~~~y~~~~~~~~~~~~~~G-- 117 (390)
T PRK08064 51 SGNPTREALEDIIAELEGGTKGFAFASGMAAISTAFL-LLS---------KGD-HVLISEDVYGGTYRMITEVLSRFG-- 117 (390)
T ss_pred CCChhHHHHHHHHHHHhCCCCeEEECCHHHHHHHHHH-HhC---------CCC-EEEEccCccchHHHHHHHHHHHcC--
Confidence 3466788999999999988788888999999988885 333 455 677778887653321111100000
Q ss_pred cCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCccc
Q 012138 194 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS 273 (470)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~ 273 (470)
..+..++..|++++++++++ ++++|+++.++||+|.+.+ +++|.++|+++|+++|+|++|..+. .
T Consensus 118 -------~~v~~v~~~d~~~l~~~l~~---~tklV~l~~p~NptG~~~d----l~~I~~la~~~g~~vvvD~a~~~~~-~ 182 (390)
T PRK08064 118 -------IEHTFVDMTNLEEVAQNIKP---NTKLFYVETPSNPLLKVTD----IRGVVKLAKAIGCLTFVDNTFLTPL-L 182 (390)
T ss_pred -------CEEEEECCCCHHHHHHhcCC---CceEEEEECCCCCCcEecc----HHHHHHHHHHcCCEEEEECCCCccc-c
Confidence 11345555688999988875 7899998888999999998 9999999999999999999987321 1
Q ss_pred CCccccccCCCCccee--eccccccC--CCcceeEEEe-cHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHH
Q 012138 274 GRMLASDWEEVRPDMV--ILGKALGG--GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAE 348 (470)
Q Consensus 274 G~~~~~~~~~~~pdi~--s~sK~l~g--G~~~ig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~ 348 (470)
... . .++ .|++ +++|.++| |. -.|++++ ++++++.++..........++..+..+...++.+ ....+
T Consensus 183 ~~~--~-~~g--~Divv~S~tK~~~G~~~~-laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l~~~gl~tl--~~R~~ 254 (390)
T PRK08064 183 QKP--L-DLG--ADVVLHSATKFLAGHSDV-LAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWLVLRGLKTL--HVRLE 254 (390)
T ss_pred cCc--h-hhC--CcEEEeecceeccCCccc-eeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcH--HHHHH
Confidence 111 1 123 3555 77799874 32 3465555 5678777765444333445555555544333322 22334
Q ss_pred HHHHHHHHHHHHHHHHHh----hCCCce---------EEEeccceeEEEEeccCCCchhHHHHHHHHHHcCce---eccC
Q 012138 349 RSAHLGEELRQHLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL---AKPT 412 (470)
Q Consensus 349 ~~~~~~~~l~~~L~~l~~----~~p~~~---------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~---~~~~ 412 (470)
+..++...+.+.|++... .||... ....+.|.++.++++.. .+...|.+.| ++. ++-|
T Consensus 255 ~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~~---~~~~~f~~~l---~l~~~~~s~G 328 (390)
T PRK08064 255 HSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQSE---EAVRQFVSHV---KLPVFAVSLG 328 (390)
T ss_pred HHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECCH---HHHHHHHHhC---CcceEcccCC
Confidence 444445555555554321 122100 12246788888888531 1333343333 441 1101
Q ss_pred ---------------------------CCCEEEEecCCCCCHHHHHHHHHHHHH
Q 012138 413 ---------------------------HDTIVRLTPPLSISSNELQEGSKALHD 439 (470)
Q Consensus 413 ---------------------------~~~~iR~~~~~~~t~e~i~~~~~~l~~ 439 (470)
.++.+|+++.+..+++.|+++.++|++
T Consensus 329 ~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~ 382 (390)
T PRK08064 329 AVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSY 382 (390)
T ss_pred CCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHh
Confidence 157899998776666666655555554
No 311
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.74 E-value=3.6e-16 Score=154.36 Aligned_cols=291 Identities=10% Similarity=0.005 Sum_probs=177.9
Q ss_pred CCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCccc
Q 012138 113 AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEA 192 (470)
Q Consensus 113 ~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~ 192 (470)
...++....|+++++.+.+.+..++++||++|+..++..+.+ +|+ .||+.++.|.+...........-+
T Consensus 60 R~gnPt~~~Le~~la~le~~~~~v~~sSG~aAi~~~l~all~---------~GD-~Vlv~~~~Y~~~~~l~~~~l~~~G- 128 (395)
T PRK05967 60 TRGTPTTDALCKAIDALEGSAGTILVPSGLAAVTVPFLGFLS---------PGD-HALIVDSVYYPTRHFCDTMLKRLG- 128 (395)
T ss_pred CCCChHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHHHHhcC---------CCC-EEEEccCCcHHHHHHHHHHHHhcC-
Confidence 345778899999999888766777788899999999987654 566 777778888664321111100000
Q ss_pred ccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcc
Q 012138 193 IRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR 272 (470)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~ 272 (470)
..+..++.++.+++++++++ ++++|++|.+.||++.+.+ +++|.++|+++|+++|+|++++...
T Consensus 129 --------i~v~~vd~~~~e~l~~al~~---~TklV~lesPsNP~l~v~d----l~~I~~la~~~g~~vvVD~t~a~p~- 192 (395)
T PRK05967 129 --------VEVEYYDPEIGAGIAKLMRP---NTKVVHTEAPGSNTFEMQD----IPAIAEAAHRHGAIVMMDNTWATPL- 192 (395)
T ss_pred --------eEEEEeCCCCHHHHHHhcCc---CceEEEEECCCCCCCcHHH----HHHHHHHHHHhCCEEEEECCccCce-
Confidence 11234444456789988876 7999999988999998887 9999999999999999999997321
Q ss_pred cCCccccccCCCCccee--eccccccC--CCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHH
Q 012138 273 SGRMLASDWEEVRPDMV--ILGKALGG--GVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAE 348 (470)
Q Consensus 273 ~G~~~~~~~~~~~pdi~--s~sK~l~g--G~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~ 348 (470)
.+....+|. |++ +.+|.++| .. -.|+++.++++.+.+........-..+|..+......|+.+.- ..+
T Consensus 193 ---~~~pl~~Ga--Divv~S~tKy~~Gh~d~-~~G~v~~~~~~~~~l~~~~~~~G~~~~p~da~l~~rgl~Tl~l--R~~ 264 (395)
T PRK05967 193 ---YFRPLDFGV--DISIHAATKYPSGHSDI-LLGTVSANEKCWPQLLEAHGTLGLCAGPDDTYQILRGLRTMGI--RLE 264 (395)
T ss_pred ---ecChhHcCC--CEEEEecccccCCCCCe-eEEEEEcCHHHHHHHHHHHHHcCCCCCHHHHHHHHcCcccHHH--HHH
Confidence 111112344 554 78899885 44 6777777877655553222212223677776666655554432 233
Q ss_pred HHHHHHHHHHHHHHHHHh----hCCCce---------EEEeccceeEEEEeccC-C-CchhHHHHHHHHHH--cCceec-
Q 012138 349 RSAHLGEELRQHLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKT-A-LPVSAYDICLKMKE--RGILAK- 410 (470)
Q Consensus 349 ~~~~~~~~l~~~L~~l~~----~~p~~~---------~~~~~~g~~~~~~~~~~-~-~~~~~~~~~~~l~~--~Gv~~~- 410 (470)
+..+++..+.+.|++... .||... ....+.|.++.+++... . ....+.+|.+.|.- .++...
T Consensus 265 ~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~~~f~~~l~l~~~~~slG~ 344 (395)
T PRK05967 265 HHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAKAHAFLDALEIFGLGYSWGG 344 (395)
T ss_pred HHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHHHHHHHHhCCcceEccCCCC
Confidence 334444444455544211 222110 11235688899988632 0 01245556655542 111110
Q ss_pred ------c------------CCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 411 ------P------------THDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 411 ------~------------~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
+ ..++.+||+..+ |+.+.+++-|.++|+
T Consensus 345 ~~sLi~~~~~~~~~~~~~~~~~~liRlSvGl----Ed~~dLi~Dl~~Al~ 390 (395)
T PRK05967 345 YESLALHVKLGDRTVAKAPYAGPVIRLQIGL----EDVPDLKADLERGFA 390 (395)
T ss_pred cceeeeeCCCChhHhhhccCCCCeEEEEecc----CCHHHHHHHHHHHHH
Confidence 0 013579999555 566777777777766
No 312
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.74 E-value=2.1e-16 Score=158.59 Aligned_cols=291 Identities=15% Similarity=0.167 Sum_probs=176.4
Q ss_pred CCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcc-cCCccc
Q 012138 114 FYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISM-SCDNEA 192 (470)
Q Consensus 114 ~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~-~~~~~~ 192 (470)
..++...+|++.++++.|.+.+++++||+.|+.+++..+.. +|+ .||+....|.+ +...... -.....
T Consensus 66 ~~~p~~~~Le~~lA~l~g~~~av~~sSG~aAi~~al~all~---------~Gd-~Vv~~~~~y~~-t~~~~~~~l~~~Gi 134 (436)
T PRK07812 66 IMNPTQDVVEQRIAALEGGVAALLLASGQAAETFAILNLAG---------AGD-HIVSSPRLYGG-TYNLFHYTLPKLGI 134 (436)
T ss_pred CCCchHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhC---------CCC-EEEEeCCcchH-HHHHHHHHhhcCeE
Confidence 34677889999999999999999999999999999976654 466 66666666543 3221110 000000
Q ss_pred ccCCCCCCCCeeeec-CCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCc
Q 012138 193 IRGFGPLLPGHLKVD-FGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 271 (470)
Q Consensus 193 ~~~~~~~~~~~~~~~-~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g 271 (470)
.+..++ ..|++++++++++ ++++|++|.+.||+|.+.| +++|.++|++||+++|+|++|+.
T Consensus 135 ---------~v~~vdd~~d~e~l~~ai~~---~tklV~ie~~sNp~G~v~D----l~~I~~la~~~gi~liVD~t~a~-- 196 (436)
T PRK07812 135 ---------EVSFVEDPDDLDAWRAAVRP---NTKAFFAETISNPQIDVLD----IPGVAEVAHEAGVPLIVDNTIAT-- 196 (436)
T ss_pred ---------EEEEECCCCCHHHHHHhCCC---CCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCcc--
Confidence 122332 2378888888875 7899999999999999998 99999999999999999999872
Q ss_pred ccCCccccccCCCCccee--eccccccC-CCcceeEEEe-cHHH------------------------------HhhcC-
Q 012138 272 RSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLA-DKEV------------------------------MLCIQ- 316 (470)
Q Consensus 272 ~~G~~~~~~~~~~~pdi~--s~sK~l~g-G~~~ig~v~~-~~~~------------------------------~~~~~- 316 (470)
+.......+| .|++ |++|.++| |- -+|+++. +..+ +...+
T Consensus 197 --~~~~~pl~~G--aDivv~S~tK~lgg~G~-~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (436)
T PRK07812 197 --PYLIRPLEHG--ADIVVHSATKYLGGHGT-AIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARV 271 (436)
T ss_pred --cccCCchhcC--CCEEEEecccccCCCCC-eEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHH
Confidence 1111111123 4654 77899984 32 3444443 2210 00000
Q ss_pred cCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh----hCCCceE---------EE-eccceeE
Q 012138 317 PGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYVK---------EV-RGRGLFN 382 (470)
Q Consensus 317 ~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~----~~p~~~~---------~~-~~~g~~~ 382 (470)
..........+|..++.+...|+.+ +-..++..+++..+.+.|++... .||.... .. .+.|.++
T Consensus 272 ~~~~~~G~~l~p~~a~l~~rgl~tL--~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~ 349 (436)
T PRK07812 272 QLLRDLGSAISPFNAFLIAQGLETL--SLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRLAPKGTGAVL 349 (436)
T ss_pred HHHHhcCCCCCHHHHHHHhcCcCcH--HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCcCCCceEE
Confidence 0011112345666666665555443 33455566666667777766421 2221100 11 3568899
Q ss_pred EEEeccCCCchhHHHHHHHHHHcCceec----------cC-----------------CCCEEEEecCCCCCHHHHHHHHH
Q 012138 383 AVEFDKTALPVSAYDICLKMKERGILAK----------PT-----------------HDTIVRLTPPLSISSNELQEGSK 435 (470)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----------~~-----------------~~~~iR~~~~~~~t~e~i~~~~~ 435 (470)
.+++..+. ..+.+|.+.|.--.+..+ |. .++.|||++.+ |+.+++++
T Consensus 350 sf~l~~~~--~~~~~f~~~l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liRlSvGl----Ed~~dli~ 423 (436)
T PRK07812 350 SFELAGGV--EAGKAFVNALTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVRLAVGI----EGIDDILA 423 (436)
T ss_pred EEEecCCH--HHHHHHHHhCCcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHH
Confidence 99885421 245566666542221111 11 15689999544 67788888
Q ss_pred HHHHHHhcccCC
Q 012138 436 ALHDVLELDLPK 447 (470)
Q Consensus 436 ~l~~~l~~~~~~ 447 (470)
-|.++|+ ..++
T Consensus 424 dl~~Al~-~~~~ 434 (436)
T PRK07812 424 DLEAGFA-AAKA 434 (436)
T ss_pred HHHHHHH-hhhc
Confidence 8888887 6543
No 313
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.74 E-value=1.8e-15 Score=154.68 Aligned_cols=326 Identities=18% Similarity=0.150 Sum_probs=192.9
Q ss_pred CCCHHHHHHHHHHHHHccccCC------CCCCCcHHHHHHHHhhhhCCCeEEec-CChhHHHHHHHHHHHHhchhcccCC
Q 012138 91 HCHPKIMKALQEQAEKLTLSSR------AFYNDKFPVFAERLTSMFGYDMVLPM-NTGAEGVETALKLARKWGYVKKKFS 163 (470)
Q Consensus 91 ~~~p~v~~a~~~~~~~~~~~~~------~~~~~~~~~l~~~l~~~~~~~~v~~~-~sGteA~~~al~~~~~~~~~~~~~~ 163 (470)
|.+|.+.+++.+......+.+. ....+.+.++++++++++|.+.+.+. ++|+.+...++.+++.+. ..+|.
T Consensus 81 ~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~~-~~~Gd- 158 (481)
T PRK04366 81 KYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAYH-EARGD- 158 (481)
T ss_pred CCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHHh-hccCc-
Confidence 4678888888765221121111 01124467788899999998765444 566666655544433211 11110
Q ss_pred CCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccc-cC
Q 012138 164 IDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVI-IP 242 (470)
Q Consensus 164 ~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~-~~ 242 (470)
.++..|++.++.| ..........+..... .+...+ ..+ |+++|++++++ ++++|++.. .|++|.+ .+
T Consensus 159 ~~~~~Vlv~~~~h-p~~~~~~~~~G~~vv~---v~~~~~-~~~---D~e~L~~~i~~---~t~~V~v~~-Pn~tG~~~~d 226 (481)
T PRK04366 159 TKRTEVIVPDSAH-GTNPASAAMAGFKVVE---IPSNED-GLV---DLEALKAAVGE---DTAALMLTN-PNTLGLFERN 226 (481)
T ss_pred CCCCEEEEcCCcc-HhHHHHHHHcCCEEEE---eecCCC-CCc---CHHHHHhhccc---CCeEEEEeC-CCCccccchH
Confidence 0224677777764 4433333332221111 111111 112 89999998875 778877655 3489965 34
Q ss_pred ChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeec--ccccc-----CCCcceeEEEecHHHHhhc
Q 012138 243 PDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVIL--GKALG-----GGVIPVSAVLADKEVMLCI 315 (470)
Q Consensus 243 ~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~--sK~l~-----gG~~~ig~v~~~~~~~~~~ 315 (470)
+++|.++|+++|+++++|++|. .+..|.. ....+| .|++++ .|.++ ||. .+|++.+++++.+.+
T Consensus 227 ----l~eI~~~a~~~gal~iVD~a~~-~~~~g~~-~~~~~G--aD~~~~~~hK~l~~P~g~Ggp-~~G~l~~~~~~~~~l 297 (481)
T PRK04366 227 ----ILEIAEIVHEAGGLLYYDGANL-NAILGKA-RPGDMG--FDVVHLNLHKTFSTPHGGGGP-GSGPVGVKEELAPFL 297 (481)
T ss_pred ----HHHHHHHHHHcCCEEEEEecCh-hhhcccC-CccccC--CCEEEEechhhcCCCCCCCCC-CeeeeeehhhhHhhC
Confidence 9999999999999999999986 1112211 122334 377644 48876 444 677888888877766
Q ss_pred CcCC-------------------ccCCCCCCHHHHHHHHHHHHHHhhhhH---HHHHHHHHHHHHHHHHHHHhhCCCceE
Q 012138 316 QPGE-------------------HGSTFGGNPLASAVAIASLDVIRDEKL---AERSAHLGEELRQHLFKIQQQFPNYVK 373 (470)
Q Consensus 316 ~~~~-------------------~~~t~~~~~~~~aaa~a~l~~~~~~~~---~~~~~~~~~~l~~~L~~l~~~~p~~~~ 373 (470)
.... ....++++.+.+.++...+..+..+.+ .++...+.+++.++|.++ .. ...
T Consensus 298 p~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~-~~---~~~ 373 (481)
T PRK04366 298 PVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI-YD---LPY 373 (481)
T ss_pred CCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh-Cc---ccC
Confidence 3110 011122344555566666666655544 345566788999988876 21 111
Q ss_pred EEeccceeEEEEeccC---CCchhHHHHHHHHHHcCceecc----C-CCCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 374 EVRGRGLFNAVEFDKT---ALPVSAYDICLKMKERGILAKP----T-HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 374 ~~~~~g~~~~~~~~~~---~~~~~~~~~~~~l~~~Gv~~~~----~-~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
. ...+..+.++.. ..+.+..++.++|.++|+.+.. . ..+.+|+++...+|++|||++++.|.++.+ ++
T Consensus 374 --~-~~~~~~~~~~~~~~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i~~-~~ 449 (481)
T PRK04366 374 --D-RPCMHEFVLSGKKLKETGVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAMKQIAE-EA 449 (481)
T ss_pred --C-CCeeEEEEEECccccccCCCHHHHHHHHHHCCccCCccccccccCCeEEEcccCCCCHHHHHHHHHHHHHHHH-HH
Confidence 1 111111112211 0023678899999999998752 1 256899999999999999999999999988 76
Q ss_pred CC
Q 012138 446 PK 447 (470)
Q Consensus 446 ~~ 447 (470)
.+
T Consensus 450 ~~ 451 (481)
T PRK04366 450 KE 451 (481)
T ss_pred Hh
Confidence 55
No 314
>PRK02769 histidine decarboxylase; Provisional
Probab=99.74 E-value=5e-15 Score=146.30 Aligned_cols=287 Identities=15% Similarity=0.088 Sum_probs=186.5
Q ss_pred cHHHHHHHHhhhhCCC--e--EEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccc
Q 012138 118 KFPVFAERLTSMFGYD--M--VLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAI 193 (470)
Q Consensus 118 ~~~~l~~~l~~~~~~~--~--v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 193 (470)
...++.++++++++.+ . .+||+||||+|..++..++.+. +++ .|++.+.. |.+...+...-+.....
T Consensus 66 ~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~-------~~~-~ii~s~~~-H~Sv~ka~~~lg~~~~~ 136 (380)
T PRK02769 66 FERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELF-------PDG-TLYYSKDT-HYSVSKIARLLRIKSRV 136 (380)
T ss_pred HHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhC-------CCc-EEEeCCCc-eehHHHHHHHcCCCCce
Confidence 3456677788888753 3 4899999999999998887641 233 55554444 66655544333322211
Q ss_pred cCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcC---cEEEEeccccCC
Q 012138 194 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN---ILMIADEIQSGL 270 (470)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~g---illI~Dev~~g~ 270 (470)
. +..+ ...+ |+++|++++++.+.++.+|++...++++|.+.| +++|.++|++|| +++++|.+|+|+
T Consensus 137 V---~~~~-~g~i---d~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp----i~~I~~i~~~~g~~~~~lHVDaA~gg~ 205 (380)
T PRK02769 137 I---TSLP-NGEI---DYDDLISKIKENKNQPPIIFANIGTTMTGAIDN----IKEIQEILKKIGIDDYYIHADAALSGM 205 (380)
T ss_pred e---ccCC-CCcC---cHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC----HHHHHHHHHHhCCCceEEEEEecccce
Confidence 1 1111 1123 899999999875445888888888999999999 999999999998 699999999863
Q ss_pred ccc----CCccccccCCCCcceeecc--ccccCCCcceeEEEecHHHHhhcCcC-----CccCCCC--CCHHHHHHHHHH
Q 012138 271 ARS----GRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPG-----EHGSTFG--GNPLASAVAIAS 337 (470)
Q Consensus 271 g~~----G~~~~~~~~~~~pdi~s~s--K~l~gG~~~ig~v~~~~~~~~~~~~~-----~~~~t~~--~~~~~~aaa~a~ 337 (470)
-.. ...+.+.. ..|.++++ |.+++.. ++|+++.+++..+.+.+. ....++. -+....++..++
T Consensus 206 ~~p~~~~~~~~d~~~---~vDsis~s~HK~~~~P~-g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~a 281 (380)
T PRK02769 206 ILPFVNNPPPFSFAD---GIDSIAISGHKFIGSPM-PCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAA 281 (380)
T ss_pred eecccCccccCCccC---CCCEEEECCcccCCCCC-CcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHH
Confidence 211 11122221 35777776 7666566 999999988777665321 0111222 344567777788
Q ss_pred HHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCceEE-EeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCC
Q 012138 338 LDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKE-VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH 413 (470)
Q Consensus 338 l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~ 413 (470)
|+.+.. ++..++..++.+++.++|++.+ +.. ..+....+.+ ..+. .++. +|..+.+.
T Consensus 282 L~~lg~~G~~~~~~~~~~la~~l~~~L~~~g------~~~~~~p~~~~v~f--~~~~-----~~~~-----~~w~l~~~- 342 (380)
T PRK02769 282 IRSLGSKGLRQRVQHCLDMAQYAVDRLQANG------IPAWRNPNSITVVF--PCPS-----ERIW-----KKWHLATS- 342 (380)
T ss_pred HHHHCHHHHHHHHHHHHHHHHHHHHHHHhCC------CEEEcCCCceEEEE--cCCC-----HHHH-----hCeeEccc-
Confidence 887766 4456677778888888886631 222 2333333333 3321 1222 56655554
Q ss_pred CCEEEEecCCCCCHHHHHHHHHHHHHHHhcccCCC
Q 012138 414 DTIVRLTPPLSISSNELQEGSKALHDVLELDLPKM 448 (470)
Q Consensus 414 ~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~~ 448 (470)
.+.+|++....+++|.++++++.|.+.+. ...+.
T Consensus 343 ~~~~hi~~~~~~~~~~~~~f~~dl~~~~~-~~~~~ 376 (380)
T PRK02769 343 GNQAHIITMPHHNKQQIDSLIDELIFDLK-NPNKI 376 (380)
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHh-ccccc
Confidence 45899998888999999999999998887 54443
No 315
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.73 E-value=7.1e-17 Score=160.08 Aligned_cols=288 Identities=16% Similarity=0.116 Sum_probs=169.8
Q ss_pred CCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCccc
Q 012138 113 AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEA 192 (470)
Q Consensus 113 ~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~ 192 (470)
.+.++...+|+++++++.|.+..++++||+.|+.+++. +.. +|+ .|++.++.|++.............
T Consensus 46 r~~~p~~~~Le~~la~l~g~~~al~~~SG~~Al~~~l~-~l~---------pGd-~Vi~~~~~y~~t~~~~~~~~~~~g- 113 (380)
T PRK06176 46 RSGNPTRFALEELIADLEGGVKGFAFASGLAGIHAVFS-LFQ---------SGD-HVLLGDDVYGGTFRLFDKVLVKNG- 113 (380)
T ss_pred CCCChhHHHHHHHHHHHhCCCCEEEECCHHHHHHHHHH-HcC---------CCC-EEEEcCCChhHHHHHHHHHHHhcC-
Confidence 34567789999999999998888999999999987664 333 565 677777777544321111100000
Q ss_pred ccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcc
Q 012138 193 IRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR 272 (470)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~ 272 (470)
..+..++..|++++++++++ ++++|++|.++||+|.+.+ +++|.++|++||+++|+|++|+.. .
T Consensus 114 --------i~v~~vd~~d~e~l~~ai~~---~t~lV~lesP~Nptg~~~d----i~~I~~la~~~gi~vivD~t~a~~-~ 177 (380)
T PRK06176 114 --------LSCTIIDTSDLSQIKKAIKP---NTKALYLETPSNPLLKITD----LAQCASVAKDHGLLTIVDNTFATP-Y 177 (380)
T ss_pred --------eEEEEcCCCCHHHHHHhcCc---CceEEEEECCCCCCceecC----HHHHHHHHHHcCCEEEEECCcccc-c
Confidence 01233444589999998875 7899998888999999998 999999999999999999999832 1
Q ss_pred cCCccccccCCCCccee--eccccccC-CCcceeEEEe-cHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHH
Q 012138 273 SGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAE 348 (470)
Q Consensus 273 ~G~~~~~~~~~~~pdi~--s~sK~l~g-G~~~ig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~ 348 (470)
.+... +...|++ +++|.++| |-.-.|+++. ++++.+.++..........+|..+......++.+. -..+
T Consensus 178 ~~~p~-----~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl~tl~--~R~~ 250 (380)
T PRK06176 178 YQNPL-----LLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQRGIKTLG--LRME 250 (380)
T ss_pred cCCcc-----ccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccCcHH--HHHH
Confidence 11111 2234665 56699975 3213455665 45666655432221112234554444433333221 1222
Q ss_pred HHHHHHHHHHHHHHHHH----hhCCCce---------EEEeccceeEEEEeccCCCchhHHHHHHHHHHc--Cce-----
Q 012138 349 RSAHLGEELRQHLFKIQ----QQFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKER--GIL----- 408 (470)
Q Consensus 349 ~~~~~~~~l~~~L~~l~----~~~p~~~---------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~--Gv~----- 408 (470)
+..+....+.+.|++.. -.||... ....+.|.++.++++.. ....+|++.|.-- +..
T Consensus 251 ~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~---~~~~~f~~~l~~~~~~~s~G~~~ 327 (380)
T PRK06176 251 AHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKND---SEAVAFVESLKLFILGESLGGVE 327 (380)
T ss_pred HHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCH---HHHHHHHHcCCcceEccCCCCCC
Confidence 23333334444444321 0111100 11235688899988632 2455666655321 111
Q ss_pred ---eccC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 409 ---AKPT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 409 ---~~~~-----------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
..|. .++.|||++.+ |+++++++-|+++|+
T Consensus 328 sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dli~dl~~Al~ 377 (380)
T PRK06176 328 SLVGIPAFMTHACIPKEQREAAGIRDGLVRLSVGI----EHEQDLLEDLEQAFA 377 (380)
T ss_pred ceeeCCcccccccCCHHHHHhcCCCcCeEEEEecc----CCHHHHHHHHHHHHh
Confidence 1111 15689999544 677888888888776
No 316
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.73 E-value=3.3e-16 Score=154.44 Aligned_cols=292 Identities=10% Similarity=0.013 Sum_probs=183.0
Q ss_pred CCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcc
Q 012138 112 RAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 191 (470)
Q Consensus 112 ~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~ 191 (470)
....++....|+++|+++.|.+.+++++||+.|+.+++..+.+ +|+ .||+....|.+........-.
T Consensus 57 sR~~nPt~~~le~~la~LEg~~~a~~~~SGmaAi~~~~~~ll~---------~GD-~Vv~~~~~Yg~t~~l~~~~l~--- 123 (395)
T PRK08114 57 GRRGTLTHFSLQEAMCELEGGAGCALYPCGAAAVANAILAFVE---------QGD-HVLMTGTAYEPTQDFCSKILS--- 123 (395)
T ss_pred cCCCChhHHHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHHHcC---------CCC-EEEEeCCCcHHHHHHHHHHHH---
Confidence 3346788899999999999999999999999999998886654 566 566666665443322110000
Q ss_pred cccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcC--cEEEEeccccC
Q 012138 192 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN--ILMIADEIQSG 269 (470)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~g--illI~Dev~~g 269 (470)
.+...+..++..|.+++++++++ ++++|++|.+.||+|.+.| +++|.++|+++| +++++|.+++
T Consensus 124 ------~~Gi~v~~vd~~d~~~l~~~l~~---~TrlV~~EtpsNp~~~v~D----I~~Ia~ia~~~g~g~~lvVDnT~a- 189 (395)
T PRK08114 124 ------KLGVTTTWFDPLIGADIAKLIQP---NTKVVFLESPGSITMEVHD----VPAIVAAVRSVNPDAVIMIDNTWA- 189 (395)
T ss_pred ------hcCcEEEEECCCCHHHHHHhcCC---CceEEEEECCCCCCCEeec----HHHHHHHHHHhCCCCEEEEECCCc-
Confidence 00112345555688999999976 7899999999999999999 999999999985 9999999997
Q ss_pred CcccCCccccccCCCCccee--eccccccCC--CcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhh
Q 012138 270 LARSGRMLASDWEEVRPDMV--ILGKALGGG--VIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 345 (470)
Q Consensus 270 ~g~~G~~~~~~~~~~~pdi~--s~sK~l~gG--~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~ 345 (470)
++.. ++......|++ +..|.++|. . -.|.++.+++..+.+........-..+|..+..+...|+.+. -
T Consensus 190 ---~p~~--~~pl~~GaDivv~S~tKyl~Ghsdv-~~G~v~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~TL~--l 261 (395)
T PRK08114 190 ---AGVL--FKALDFGIDISIQAGTKYLVGHSDA-MIGTAVANARCWEQLRENSYLMGQMVDADTAYMTSRGLRTLG--V 261 (395)
T ss_pred ---cccc--cCHHHcCCcEEEEcCcccccCCCcc-eeEEEEcCHHHHHHHHHHHHhccCCCCHHHHHHHHcCCCcHH--H
Confidence 2222 23223334666 566988853 4 667677777765555422111222467777776655554432 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHh----hCCCce---------EEEeccceeEEEEeccCCCchhHHHHHHHHHH--cCce--
Q 012138 346 LAERSAHLGEELRQHLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKE--RGIL-- 408 (470)
Q Consensus 346 ~~~~~~~~~~~l~~~L~~l~~----~~p~~~---------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~--~Gv~-- 408 (470)
..++..+++..+.+.|++... .||... ....+.|.++.+++..........+|++.|.- .++.
T Consensus 262 R~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~f~~~l~l~~~a~SlG 341 (395)
T PRK08114 262 RLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTDEQLANYLDNFSLFSMAYSWG 341 (395)
T ss_pred HHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccHHHHHHHHHhCCcceeecccC
Confidence 334444555555555554321 222110 11235688999988631001244556555532 1111
Q ss_pred -----ec---c-------------CCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 409 -----AK---P-------------THDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 409 -----~~---~-------------~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
+. | -.++.|||++.+ |+++.+++-|.++|+
T Consensus 342 g~~SLi~~~~~~~~~~~~~~~~~~~~~~liRlSvGl----Ed~~DLi~Dl~~Al~ 392 (395)
T PRK08114 342 GFESLILANQPEEIAAIRPAGEVDFTGTLIRLHIGL----EDVDDLIADLAAGFA 392 (395)
T ss_pred CccceeccCCchhhhccCChhHhcCCCCeEEEEecc----CCHHHHHHHHHHHHH
Confidence 11 0 013689999554 567777777777776
No 317
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.73 E-value=2.9e-16 Score=138.92 Aligned_cols=271 Identities=15% Similarity=0.186 Sum_probs=177.8
Q ss_pred CCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCC-
Q 012138 131 GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG- 209 (470)
Q Consensus 131 ~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 209 (470)
..|.+....|..|.+.+.++.... ||+++|+.+.|+|...+..+. +.... ++.+|.+
T Consensus 85 t~dnic~GvGsDE~ID~iiR~~c~---------PGkeKIl~cPPtysMY~v~A~-iNd~e------------Vvkvpl~p 142 (375)
T KOG0633|consen 85 TSDNICVGVGSDELIDLIIRCVCD---------PGKEKILDCPPTYSMYVVDAA-INDAE------------VVKVPLNP 142 (375)
T ss_pred CccceEEecCcHHHHHHHHhheec---------CCccceeecCCcceeEEEEee-cCCce------------EEEecCCC
Confidence 356788888999999999998877 788899999999865544432 11111 2222221
Q ss_pred ----CHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCC
Q 012138 210 ----DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 285 (470)
Q Consensus 210 ----d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~ 285 (470)
|.+++-+.++.. ..++++++.++.||+|.+. +.+.+.+|.+.-. +.++++||+|..|.-.+.. ...-.--
T Consensus 143 dF~lnvdai~evl~~d-s~iK~~F~tSPgNPtg~~i-k~~di~KiLe~p~--nglVVvDEAYidFsg~~S~--~~lV~kY 216 (375)
T KOG0633|consen 143 DFSLNVDAIAEVLELD-SKIKCIFLTSPGNPTGSII-KEDDILKILEMPD--NGLVVVDEAYIDFSGVESR--MKLVKKY 216 (375)
T ss_pred CccccHHHHHHHHhcc-ccceEEEEcCCCCCCcccc-cHHHHHHHHhCCC--CcEEEEeeeeEeecccccc--chHhHhC
Confidence 678888877642 3688888666699999999 7777887777665 7899999999987322211 1111113
Q ss_pred ccee---ecccccc-CCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHH--Hhh-hhHHHHHHHHHHHHH
Q 012138 286 PDMV---ILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDV--IRD-EKLAERSAHLGEELR 358 (470)
Q Consensus 286 pdi~---s~sK~l~-gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~--~~~-~~~~~~~~~~~~~l~ 358 (470)
|+++ +|||++| .|+ |+|+...+.++++.+... -..|+.+.++..+|++++.- +.. +..++.+.+-+.+|.
T Consensus 217 pNLivlqTlSKsfGLAGi-RvG~~~~~~~ia~iln~~--KaPYNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~ 293 (375)
T KOG0633|consen 217 PNLIVLQTLSKSFGLAGI-RVGYGAFPLSIAEILNRA--KAPYNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLF 293 (375)
T ss_pred CceeehhhhhhhcCccee-EeecccccHHHHHHHHhc--cCCccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHH
Confidence 4443 8999999 898 999999999998887643 34555566666666666641 111 334444444444444
Q ss_pred HHHHHHHhhCCCceEEE--eccceeEEEEeccCCCchhHHHHHHHH-HHcCceecc-----CCCCEEEEecCCCCCHHHH
Q 012138 359 QHLFKIQQQFPNYVKEV--RGRGLFNAVEFDKTALPVSAYDICLKM-KERGILAKP-----THDTIVRLTPPLSISSNEL 430 (470)
Q Consensus 359 ~~L~~l~~~~p~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~-----~~~~~iR~~~~~~~t~e~i 430 (470)
..|.++ +++... .....|+.+++..... .-+..+..++ -+.||.++- +-.+++|++ .-|+||-
T Consensus 294 keLt~v-----~~~~~~~gg~daNFiLi~v~~~~n-~~akkly~q~at~~gVvVRfrgse~~c~G~lRit---vGt~Een 364 (375)
T KOG0633|consen 294 KELTEV-----PFLNDYPGGSDANFILIEVTGGDN-GMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRIT---VGTPEEN 364 (375)
T ss_pred HHhhcC-----ccccCCCCcccccEEEEEEcCCCc-HHHHHHHHHHHHhcceEEEEcCCccccceeEEEE---cCCcccc
Confidence 445443 233322 2345678887754331 2344444444 455999863 347899999 5688889
Q ss_pred HHHHHHHHHHH
Q 012138 431 QEGSKALHDVL 441 (470)
Q Consensus 431 ~~~~~~l~~~l 441 (470)
..+++.|++++
T Consensus 365 tvL~k~~K~~l 375 (375)
T KOG0633|consen 365 TVLMKCLKQFL 375 (375)
T ss_pred hHHHHHHHhhC
Confidence 99999888763
No 318
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.72 E-value=1.9e-16 Score=156.98 Aligned_cols=285 Identities=13% Similarity=0.133 Sum_probs=173.6
Q ss_pred CCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccc
Q 012138 114 FYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAI 193 (470)
Q Consensus 114 ~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 193 (470)
+.++...+|++.++++.|.+..+++++|+.|+..++. +.. +|+ .|++..+.|.+.............
T Consensus 47 ~~~p~~~~Le~~lA~l~g~~~~~~~~sG~aai~~~~~-~l~---------~Gd-~Viv~~~~y~~~~~~~~~~~~~~G-- 113 (377)
T PRK07671 47 TGNPTRAALEELIAVLEGGHAGFAFGSGMAAITAVMM-LFS---------SGD-HVILTDDVYGGTYRVMTKVLNRFG-- 113 (377)
T ss_pred CCChHHHHHHHHHHHHhCCCceEEeCCHHHHHHHHHH-HhC---------CCC-EEEECCCccchHHHHHHHHHhcCC--
Confidence 4567789999999999998888889999988876653 332 465 677777887543221111100000
Q ss_pred cCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCccc
Q 012138 194 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS 273 (470)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~ 273 (470)
..+..++..|++++++++++ ++++|+++.++||+|.+.+ +++|.++|+++|+++|+||+|... ..
T Consensus 114 -------~~v~~v~~~d~~~l~~ai~~---~tklV~le~P~NPtg~~~d----l~~I~~la~~~g~~lvvD~a~~~~-~~ 178 (377)
T PRK07671 114 -------IEHTFVDTSNLEEVEEAIRP---NTKAIYVETPTNPLLKITD----IKKISTIAKEKGLLTIVDNTFMTP-YW 178 (377)
T ss_pred -------eEEEEECCCCHHHHHHhcCC---CCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCCcc-cc
Confidence 11244555589999999875 7899998888999999998 999999999999999999998731 11
Q ss_pred CCccccccCCCCccee--eccccccCC--CcceeEEEe-cHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHH
Q 012138 274 GRMLASDWEEVRPDMV--ILGKALGGG--VIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAE 348 (470)
Q Consensus 274 G~~~~~~~~~~~pdi~--s~sK~l~gG--~~~ig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~ 348 (470)
+... + ++ .|++ +++|.++|. . -.|++++ ++++++.+........-..++..+..+...++.+.. .++
T Consensus 179 ~~p~--~-~g--~Divv~S~sK~l~G~~~~-~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l~tl~~--R~~ 250 (377)
T PRK07671 179 QSPI--S-LG--ADIVLHSATKYLGGHSDV-VAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLLLRGLKTLGI--RME 250 (377)
T ss_pred CChh--h-hC--CeEEEecCcccccCCccc-eeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHHHcCcChHHH--HHH
Confidence 1211 1 22 3554 778999842 2 2444554 567777665333222233566666666555444332 334
Q ss_pred HHHHHHHHHHHHHHHHHh----hCCCce---------EEEeccceeEEEEeccCCCchhHHHHHHHHHH--cCcee----
Q 012138 349 RSAHLGEELRQHLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKE--RGILA---- 409 (470)
Q Consensus 349 ~~~~~~~~l~~~L~~l~~----~~p~~~---------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~--~Gv~~---- 409 (470)
+..++...+.+.|++... .||..- ....+.|.++.+++. .. ....+|.+.|.- .++..
T Consensus 251 ~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~-~~--~~~~~f~~~l~l~~~~~s~G~~~ 327 (377)
T PRK07671 251 EHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDVG-SE--ETANKVLERLQYFTLAESLGAVE 327 (377)
T ss_pred HHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEeC-CH--HHHHHHHHhCCcceEccCCCCCC
Confidence 444555555555554211 122100 012356888889883 21 245566665531 12111
Q ss_pred ----ccC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 012138 410 ----KPT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVL 441 (470)
Q Consensus 410 ----~~~-----------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l 441 (470)
.|. .++.|||++.+ |+.+.+++-|+++|
T Consensus 328 sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al 376 (377)
T PRK07671 328 SLISIPSQMTHASIPADRRKELGITDGLIRISVGI----EDGEDLIEDLAQAL 376 (377)
T ss_pred eEeECCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHh
Confidence 111 15689999554 56777777777765
No 319
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.72 E-value=9.4e-16 Score=152.57 Aligned_cols=308 Identities=14% Similarity=0.075 Sum_probs=186.7
Q ss_pred CCHH-HHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCC---CeEEecC-ChhHHHHHHHHHHHHhchhcccCCCCC
Q 012138 92 CHPK-IMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGY---DMVLPMN-TGAEGVETALKLARKWGYVKKKFSIDE 166 (470)
Q Consensus 92 ~~p~-v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~---~~v~~~~-sGteA~~~al~~~~~~~~~~~~~~~g~ 166 (470)
.+|+ |++++.+..-...+... -......+..+.++++++. ++|+|+. |||++++.++..+.. +++
T Consensus 23 ~~~~~v~~a~~~~~~~~~hr~~-~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~---------~~~ 92 (378)
T PRK03080 23 KRPGWQLEALADALLGRSHRQK-PVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLG---------ARR 92 (378)
T ss_pred CChHHHHHHHHhhhcccCcCCH-HHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCC---------CCc
Confidence 4577 88888754321112111 1234556777888888874 2577775 999999999986632 223
Q ss_pred cEEEEEccCccccccch-h-cccCCcccccCCCCCCCCeeeecCC---CHHHHHHHHHhcCCCeEEEEEccccCCCcccc
Q 012138 167 AIIVSCCGCFHGRTLAA-I-SMSCDNEAIRGFGPLLPGHLKVDFG---DITALEKIFKESGDQIAGFLFEPIQGEAGVII 241 (470)
Q Consensus 167 ~~ii~~~~~yhg~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~---d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~ 241 (470)
..++ ..+. ||..... + ...+.. ... ....+++ |+++++ .++.|.+..+.+.+|.+.
T Consensus 93 ~~vi-~~g~-f~~~~~~~~~~~~g~~--~v~-------~~~~~~g~~~d~~~i~--------~~~~V~~~h~~t~tG~~~ 153 (378)
T PRK03080 93 VDHL-AWES-FGSKWATDVVKQLKLE--DPR-------VLEADYGSLPDLSAVD--------FDRDVVFTWNGTTTGVRV 153 (378)
T ss_pred ceEE-EeCH-HHHHHHHHHHhhcCCC--Cce-------EeccCCCCCCCHhhcC--------CCCCEEEEecCCccceec
Confidence 2343 3454 5543332 1 111110 000 0111111 445432 134577777788999999
Q ss_pred CChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecc--ccccCCCcceeEEEecHHHHhhcCcCC
Q 012138 242 PPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGE 319 (470)
Q Consensus 242 ~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~s--K~l~gG~~~ig~v~~~~~~~~~~~~~~ 319 (470)
| +++|.+ ++||+++++|.+|+ +| ...+..+ + .|++++| |++++.. .+|+++.+++..+.+.+..
T Consensus 154 p----i~~I~~--~~~g~~~vVDa~qs-~G--~~pidv~--~--iD~~~~s~~K~l~~P~-G~g~l~v~~~~~~~~~p~~ 219 (378)
T PRK03080 154 P----VARWIG--ADREGLTICDATSA-AF--ALPLDWS--K--LDVYTFSWQKVLGGEG-GHGMAILSPRAVERLESYT 219 (378)
T ss_pred c----chhhcc--ccCCCeEEEecccc-cc--cCCCCHH--H--CcEEEEehhhhCCCCC-ceEEEEECHHHHHhhhccc
Confidence 8 999988 88999999999998 22 1122222 2 3777665 9988765 7899999999887765421
Q ss_pred c----------------------cCCC-CCCHHHHHHHHHHHHHHhh----hhHHHHHHHHHHHHHHHHHHHHhhCCCce
Q 012138 320 H----------------------GSTF-GGNPLASAVAIASLDVIRD----EKLAERSAHLGEELRQHLFKIQQQFPNYV 372 (470)
Q Consensus 320 ~----------------------~~t~-~~~~~~~aaa~a~l~~~~~----~~~~~~~~~~~~~l~~~L~~l~~~~p~~~ 372 (470)
. ..++ +.+..+..++.++|+.+.+ +.+.++.+++.+++++.|+++.... .+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~--~~ 297 (378)
T PRK03080 220 PARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWAT--PL 297 (378)
T ss_pred CCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcc--cc
Confidence 0 1122 2444555566778888765 3455667777778888777653210 11
Q ss_pred E-EEe-ccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCC----CCEEEEecCCCCCHHHHHHHHHHHHHHHhcccC
Q 012138 373 K-EVR-GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 373 ~-~~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~----~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
. ... ..+.++.+.++... .....++...|.++|+.+..+. .+.+|+++...+|++||+.+++.|+++++ +++
T Consensus 298 ~~~~~~~s~~i~~~~~~~~~-~~~~~~~~~~l~~~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~-~~~ 375 (378)
T PRK03080 298 VADPATRSNTSVTLDFVDAQ-AAVDAAAVAKLLRENGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFE-RLK 375 (378)
T ss_pred cCCccccCccEEEEEcCCch-HHHHHHHHHHHHHcCCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHH-HHh
Confidence 1 011 12345666544310 0023356777777888876432 47899999999999999999999999988 654
No 320
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.71 E-value=4.8e-16 Score=152.96 Aligned_cols=285 Identities=20% Similarity=0.189 Sum_probs=172.6
Q ss_pred CCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCccc
Q 012138 113 AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEA 192 (470)
Q Consensus 113 ~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~ 192 (470)
.+.++....+++.|+++.+.+.++.++||..|+.+++..+.+ +|+ .|+.....|++..........
T Consensus 51 R~gnPt~~~le~~la~Le~g~~a~~~~SGmaAi~~~l~~ll~---------~Gd-~iv~~~~~Y~~t~~~~~~~l~---- 116 (386)
T PF01053_consen 51 RYGNPTVRALEQRLAALEGGEDALLFSSGMAAISAALLALLK---------PGD-HIVASDDLYGGTYRLLEELLP---- 116 (386)
T ss_dssp TTC-HHHHHHHHHHHHHHT-SEEEEESSHHHHHHHHHHHHS----------TTB-EEEEESSSSHHHHHHHHHCHH----
T ss_pred ccccccHHHHHHHHHHhhcccceeeccchHHHHHHHHHhhcc---------cCC-ceEecCCccCcchhhhhhhhc----
Confidence 345777899999999999999999999999999999887765 465 788888888664322111110
Q ss_pred ccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcC-cEEEEeccccCCc
Q 012138 193 IRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN-ILMIADEIQSGLA 271 (470)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~g-illI~Dev~~g~g 271 (470)
.+...+.+++..|+++|++++++ ++++|++|++.||+..+.+ +++|.++|+++| +++|+|...+..
T Consensus 117 -----~~gv~v~~~d~~d~~~l~~~l~~---~t~~v~~EspsNP~l~v~D----l~~i~~~a~~~g~~~~vVDnT~atp- 183 (386)
T PF01053_consen 117 -----RFGVEVTFVDPTDLEALEAALRP---NTKLVFLESPSNPTLEVPD----LEAIAKLAKEHGDILVVVDNTFATP- 183 (386)
T ss_dssp -----HTTSEEEEESTTSHHHHHHHHCT---TEEEEEEESSBTTTTB-------HHHHHHHHHHTTT-EEEEECTTTHT-
T ss_pred -----ccCcEEEEeCchhHHHHHhhccc---cceEEEEEcCCCccccccc----HHHHHHHHHHhCCceEEeeccccce-
Confidence 00112345656689999999987 8999999999999999998 999999999998 999999997621
Q ss_pred ccCCccccccCCCCccee--eccccccC-CCcceeEEEec--HHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhH
Q 012138 272 RSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLAD--KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKL 346 (470)
Q Consensus 272 ~~G~~~~~~~~~~~pdi~--s~sK~l~g-G~~~ig~v~~~--~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~ 346 (470)
+.+..+....|++ |.+|.++| |=.-.|+++.+ +++.+.++..........+|..+......|+.+ .-.
T Consensus 184 -----~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~Tl--~~R 256 (386)
T PF01053_consen 184 -----YNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLSPFDAWLLLRGLRTL--PLR 256 (386)
T ss_dssp -----TTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--HHHHHHHHHHHTTH--HHH
T ss_pred -----eeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCccchHHHHHHHhcCCCcH--HHH
Confidence 1122222224665 78899984 22145666654 467665543222112234566666555444433 223
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCceEEE------------------eccceeEEEEeccCCCchhHHHHHHHHHHc--C
Q 012138 347 AERSAHLGEELRQHLFKIQQQFPNYVKEV------------------RGRGLFNAVEFDKTALPVSAYDICLKMKER--G 406 (470)
Q Consensus 347 ~~~~~~~~~~l~~~L~~l~~~~p~~~~~~------------------~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~--G 406 (470)
.++..+++..+.+.|++. | .+..+ .+.|.++.+++.... .....|.+.|.-- |
T Consensus 257 ~~~~~~nA~~lA~~L~~h----p-~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~--~~~~~f~~~l~l~~~~ 329 (386)
T PF01053_consen 257 MERQNENAEALAEFLEEH----P-KVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGE--EAARRFLDALKLFSIA 329 (386)
T ss_dssp HHHHHHHHHHHHHHHHTS----T-TEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHH--HHHHHHHHH-SSSEES
T ss_pred HHHHHHHHHHHHHHHHhC----C-CCCeEEEcccccccceeeeeecccccCceeEEEeccch--hhhHhHHhhhhhHhhh
Confidence 445555555565655552 2 23322 255678888887531 1455666665321 1
Q ss_pred cee--------ccC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 407 ILA--------KPT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 407 v~~--------~~~-----------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
... .|. .++.||++..+ |+.+++++.|+++|+
T Consensus 330 ~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGl----Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 330 PSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGL----EDPDDLIADLEQALE 386 (386)
T ss_dssp SS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--S----S-HHHHHHHHHHHHH
T ss_pred hhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEecc----CCHHHHHHHHHHhcC
Confidence 111 111 15789999554 678888888888764
No 321
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.69 E-value=3.1e-14 Score=129.36 Aligned_cols=306 Identities=16% Similarity=0.168 Sum_probs=198.0
Q ss_pred ccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCC
Q 012138 87 VNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDE 166 (470)
Q Consensus 87 ~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~ 166 (470)
.++||.+|++.+-+.+.++...+. -+....--.++..+|+.+.+.|+..+.. |||
T Consensus 39 ~~lgh~sPe~~qIm~~v~egikyV----------------FkT~n~~tf~isgsGh~g~E~al~N~le---------Pgd 93 (385)
T KOG2862|consen 39 PSLGHMSPEFVQIMDEVLEGIKYV----------------FKTANAQTFVISGSGHSGWEAALVNLLE---------PGD 93 (385)
T ss_pred CccccCCHHHHHHHHHHHHHHHHH----------------hccCCCceEEEecCCcchHHHHHHhhcC---------CCC
Confidence 456777777776666555432211 0111223467788899999999998776 788
Q ss_pred cEEEEEccCccccccch-hcccCCcccccCCCCCCCCeeeecCC---CHHHHHHHHHhcCCCeEEEEEccccCCCccccC
Q 012138 167 AIIVSCCGCFHGRTLAA-ISMSCDNEAIRGFGPLLPGHLKVDFG---DITALEKIFKESGDQIAGFLFEPIQGEAGVIIP 242 (470)
Q Consensus 167 ~~ii~~~~~yhg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~ 242 (470)
..+++..+.|.-+.... ..++.+ . +++..+.. .++.+++++.+| ++++|++....+.||+..|
T Consensus 94 ~vLv~~~G~wg~ra~D~~~r~ga~----V-------~~v~~~~G~~~~le~i~~~lsqh--~p~~vfv~hgdsSTgV~q~ 160 (385)
T KOG2862|consen 94 NVLVVSTGTWGQRAADCARRYGAE----V-------DVVEADIGQAVPLEEITEKLSQH--KPKAVFVTHGDSSTGVLQD 160 (385)
T ss_pred eEEEEEechHHHHHHHHHHhhCce----e-------eEEecCcccCccHHHHHHHHHhc--CCceEEEEecCccccccch
Confidence 66666766652221111 111111 0 01111111 689999999997 7788888777888999875
Q ss_pred ChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcCCc--
Q 012138 243 PDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEH-- 320 (470)
Q Consensus 243 ~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~-- 320 (470)
.++.+.++|++|++++++|-|-+ -.|..|.++.|+++.-..---|++++.- .++.+..++...++++....
T Consensus 161 ---~~~~~g~lc~k~~~lllVD~VaS---lggt~F~mDewgVDvaytgSQKaL~aP~-GLsiisfS~ka~~~~~~rK~~~ 233 (385)
T KOG2862|consen 161 ---LLAISGELCHKHEALLLVDTVAS---LGGTEFEMDEWGVDVAYTGSQKALGAPA-GLSIISFSDKALEAIRDRKTKP 233 (385)
T ss_pred ---HHHHHHHHhhcCCeEEEEechhh---cCCccceehhhcccEEEecchhhcCCCC-CcceeecCHHHHHHHhhccCCc
Confidence 24666789999999999999987 3455677888888422223349999544 55667888877776653211
Q ss_pred ---------------------cCCCCCCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCceEE-E
Q 012138 321 ---------------------GSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKE-V 375 (470)
Q Consensus 321 ---------------------~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~-~ 375 (470)
...++.+........++|..+.+ ++..++-++++++++..|++++.+. ++.. .
T Consensus 234 ~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~--fv~~e~ 311 (385)
T KOG2862|consen 234 VSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQL--FVVDEE 311 (385)
T ss_pred eEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc--eecChh
Confidence 11223555566777788887766 5566777888999999999976542 1111 1
Q ss_pred eccceeEEEEeccCCCchhHHHHHHHHHHc-Cceecc----CCCCEEEEec-CCCCCHHHHHHHHHHHHHHHh
Q 012138 376 RGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKP----THDTIVRLTP-PLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 376 ~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~----~~~~~iR~~~-~~~~t~e~i~~~~~~l~~~l~ 442 (470)
........+.++. +.+..+++.++..+ ++.+.. ..+.++||.. ....+.|.|+..++.|+.++.
T Consensus 312 ~rlptvttv~vp~---gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq 381 (385)
T KOG2862|consen 312 LRLPTVTTVKVPY---GVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQ 381 (385)
T ss_pred hccCcceeeecCC---CCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHh
Confidence 1222233343333 34888999999999 555543 3478999964 345688999999999999987
No 322
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.69 E-value=3.5e-15 Score=146.99 Aligned_cols=309 Identities=10% Similarity=0.052 Sum_probs=192.2
Q ss_pred CCHHHHHHHHHHHHHccc---cC---CCCC---CCcHHHHHHHHhhhhCC-C--e-EEecCChhHHHHHHHHHHHHhchh
Q 012138 92 CHPKIMKALQEQAEKLTL---SS---RAFY---NDKFPVFAERLTSMFGY-D--M-VLPMNTGAEGVETALKLARKWGYV 158 (470)
Q Consensus 92 ~~p~v~~a~~~~~~~~~~---~~---~~~~---~~~~~~l~~~l~~~~~~-~--~-v~~~~sGteA~~~al~~~~~~~~~ 158 (470)
.+++|++++...+..+.. +. .... .+...++.+.++++++. + . +++++||+.|+|+++..+..
T Consensus 14 ~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~---- 89 (360)
T PRK05355 14 LPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLG---- 89 (360)
T ss_pred CCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCC----
Confidence 579999999988754310 00 0011 24566778888888874 2 3 55668899999999987754
Q ss_pred cccCCCCCcEEEEEccCccccccc-hhcccCCcccccCCCCCCCCeeeecCCCHHHHHH-HHHhcCCCeEEEEEccccCC
Q 012138 159 KKKFSIDEAIIVSCCGCFHGRTLA-AISMSCDNEAIRGFGPLLPGHLKVDFGDITALEK-IFKESGDQIAGFLFEPIQGE 236 (470)
Q Consensus 159 ~~~~~~g~~~ii~~~~~yhg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~-~l~~~~~~~~~vi~epi~n~ 236 (470)
++++..++..+.| |.... .....+.... . ...+. ....+..++++ .+++ ++++|.+...-+.
T Consensus 90 -----~g~~~l~i~~G~f-g~r~~~~a~~~g~~~~-~---~~~~~---~g~~~~~~~~~~~l~~---~~~~V~~th~eTs 153 (360)
T PRK05355 90 -----GGKKADYVDTGSW-SKKAIKEAKKYGEVNV-A---ASSED---DGFTYIPPLDEWQLSD---DAAYVHYTSNETI 153 (360)
T ss_pred -----CCCeEEEEECCHH-HHHHHHHHHHhCCceE-E---ecccc---cCCCCCCChhhccCCC---CCCEEEEccCCCc
Confidence 4554555555554 32221 1111111100 0 00000 00113334444 5544 6788888887888
Q ss_pred CccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecc--ccccCCCcceeEEEecHHHHhh
Q 012138 237 AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLC 314 (470)
Q Consensus 237 ~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~s--K~l~gG~~~ig~v~~~~~~~~~ 314 (470)
||...|+ +++| ||+++|+|.+|+ +| +..+..+.+ |++++| |.++ .. .+|.+++++++.+.
T Consensus 154 tGv~~~~---i~~i------~g~l~vVDavss-~g--~~~idv~~~----d~~~~ssqK~lg-P~-Glg~l~~s~~~l~~ 215 (360)
T PRK05355 154 DGTEFHE---LPDT------GDVPLVADMSSD-IL--SRPIDVSKF----GLIYAGAQKNIG-PA-GLTIVIVREDLLGR 215 (360)
T ss_pred ceEecCc---cccc------CCCcEEEEcCcc-cc--CccCCHHHc----cEEEEecccccc-CC-ceEEEEECHHHHhh
Confidence 9999831 5555 899999999998 21 222223333 466555 9886 33 68999999999887
Q ss_pred cCcC-----------Ccc-CCCCCCHHHHHHHHHHHHHHhhh----hHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecc
Q 012138 315 IQPG-----------EHG-STFGGNPLASAVAIASLDVIRDE----KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGR 378 (470)
Q Consensus 315 ~~~~-----------~~~-~t~~~~~~~~aaa~a~l~~~~~~----~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~ 378 (470)
+.+. ... ..+++|.....+..++|+++.++ ++.++.+++.+++++.|+++.. +......-...
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~-~~~~~~~~~rs 294 (360)
T PRK05355 216 ALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDF-YRNPVAPEDRS 294 (360)
T ss_pred cccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCC-cccCCChhhcC
Confidence 7652 111 12457777888888999988764 5666777788888888877641 10001000112
Q ss_pred ceeEEEEeccCCCchhHHHHHHHHHHcCceeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 379 GLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 379 g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~--~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
+....+.++.. ....++.+.+.++|+.+.++. .+.+|+++...+|.|||+++++.|+++++
T Consensus 295 ~~v~sf~~~~~---~~~~~~~~~~~~~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 295 RMNVPFTLADE---ELDKKFLAEAKAAGLVGLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFER 357 (360)
T ss_pred CcEEEEEcCCh---HHHHHHHHHHHHCCCcccCCCCccCcEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 24455544432 134567788889999986553 47899999999999999999999999876
No 323
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.68 E-value=8.8e-15 Score=143.46 Aligned_cols=308 Identities=12% Similarity=0.080 Sum_probs=188.2
Q ss_pred CCHHHHHHHHHHHHHccccCCCC------CC---CcHHHHHHHHhhhhCC-C--eEEec-CChhHHHHHHHHHHHHhchh
Q 012138 92 CHPKIMKALQEQAEKLTLSSRAF------YN---DKFPVFAERLTSMFGY-D--MVLPM-NTGAEGVETALKLARKWGYV 158 (470)
Q Consensus 92 ~~p~v~~a~~~~~~~~~~~~~~~------~~---~~~~~l~~~l~~~~~~-~--~v~~~-~sGteA~~~al~~~~~~~~~ 158 (470)
.|..|++++.+.+..+.....+. .. +..+++.+.+.++++. + .|+++ +|||+|+++++..+..
T Consensus 3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~---- 78 (349)
T TIGR01364 3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLA---- 78 (349)
T ss_pred CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCC----
Confidence 45688899988887544111111 11 3456677788888874 2 46666 5599999999987654
Q ss_pred cccCCCCCcEEEEEccCccccccch-hcccCCcccccCCCCCCCCeeeecCC---CHHHHHHHHHhcCCCeEEEEEcccc
Q 012138 159 KKKFSIDEAIIVSCCGCFHGRTLAA-ISMSCDNEAIRGFGPLLPGHLKVDFG---DITALEKIFKESGDQIAGFLFEPIQ 234 (470)
Q Consensus 159 ~~~~~~g~~~ii~~~~~yhg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---d~~~Le~~l~~~~~~~~~vi~epi~ 234 (470)
++++..++..+.| |....- ....+.... .... ...++. ++++++ ++ .++++|.+...-
T Consensus 79 -----~~~~~l~i~~G~f-g~r~~~~a~~~g~~~~-~~~~------~~~~~~~~~~~~~~~--~~---~~~~~v~~th~E 140 (349)
T TIGR01364 79 -----EGKVADYIVTGAW-SKKAAKEAKKYGVVNV-VASG------KEGNYTKIPDPSTWE--IS---EDAAYVHYCANE 140 (349)
T ss_pred -----CCCeEEEEECCHH-HHHHHHHHHHhCCcEE-Eecc------ccCCCCCCCCHHhcC--CC---CCCCEEEEcCCC
Confidence 4554444455554 332211 111111000 0000 001122 444443 12 267888888878
Q ss_pred CCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecc--ccccCCCcceeEEEecHHHH
Q 012138 235 GEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVM 312 (470)
Q Consensus 235 n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~s--K~l~gG~~~ig~v~~~~~~~ 312 (470)
+.||...+ ++++.+++++++|.+++ + .+.....+.+ |++++| |.++ .. .+|.+++++++.
T Consensus 141 TstGv~~~---------~l~~~~~~l~iVDavss-~--g~~~id~~~~----d~~~~ssqK~lg-P~-Glg~l~~s~~~~ 202 (349)
T TIGR01364 141 TIHGVEFR---------ELPDVKNAPLVADMSSN-I--LSRPIDVSKF----GLIYAGAQKNIG-PA-GLTVVIVRKDLL 202 (349)
T ss_pred CcccEecc---------eecccCCCeEEEEcccc-c--cCccCCHHHc----cEEEEecccccC-CC-ceEEEEECHHHH
Confidence 88999874 67788999999999998 2 1222223332 355554 9886 33 689999999988
Q ss_pred hhcCcCC-----------ccCC-CCCCHHHHHHHHHHHHHHhh----hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEe
Q 012138 313 LCIQPGE-----------HGST-FGGNPLASAVAIASLDVIRD----EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR 376 (470)
Q Consensus 313 ~~~~~~~-----------~~~t-~~~~~~~~aaa~a~l~~~~~----~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~ 376 (470)
+.+.+.. ...+ +++|.....+..++|+++.+ +++.++.+++.+++++.|+++..-+........
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~ 282 (349)
T TIGR01364 203 GRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRN 282 (349)
T ss_pred hhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHH
Confidence 7664421 1222 35677788888889998765 346666677777788777776311100010001
Q ss_pred ccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 377 GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 377 ~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~--~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
.......+.++... ...++.+.+.++|+.+.++. .+.+|+++...+|+|||+.+++.|+++++
T Consensus 283 rs~~v~sf~~~~~~---~~~~~~~~~~~~Gi~~~~~~~~~g~vRvS~~~~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 283 RSRMNVVFTLGNEE---LEKRFLKEAEERGLVSLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred cCCeEEEEecCChh---HhHHHHHHHHHCCCcccCCccccCeeEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 12244555444321 23567678889999666664 47899999999999999999999999776
No 324
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.68 E-value=1.6e-15 Score=141.33 Aligned_cols=164 Identities=21% Similarity=0.240 Sum_probs=122.5
Q ss_pred CCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcc
Q 012138 112 RAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 191 (470)
Q Consensus 112 ~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~ 191 (470)
....++....|+++++.+-|--..+.+.||..|+..|+..+.. +|| .||+-..-| |.+......+-
T Consensus 57 sRi~NPT~~vlE~RiAaLEGG~aa~a~aSG~AA~~~ai~~la~---------aGD-~iVss~~LY-GGT~~lf~~tl--- 122 (426)
T COG2873 57 TRIMNPTTDVLEERIAALEGGVAALAVASGQAAITYAILNLAG---------AGD-NIVSSSKLY-GGTYNLFSHTL--- 122 (426)
T ss_pred eeccCchHHHHHHHHHHhhcchhhhhhccchHHHHHHHHHhcc---------CCC-eeEeecccc-CchHHHHHHHH---
Confidence 3355777899999999988777788899999999999997765 566 677766555 33333322221
Q ss_pred cccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCc
Q 012138 192 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 271 (470)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g 271 (470)
..+.-++.++.-+|++.++++|++ +|++|++|.+.||.+.+.+ +++|.++|++||+++|+|...+.
T Consensus 123 -----~~~Gi~v~fvd~~d~~~~~~aI~~---nTkavf~EtigNP~~~v~D----ie~ia~iAh~~gvpliVDNT~at-- 188 (426)
T COG2873 123 -----KRLGIEVRFVDPDDPENFEAAIDE---NTKAVFAETIGNPGLDVLD----IEAIAEIAHRHGVPLIVDNTFAT-- 188 (426)
T ss_pred -----HhcCcEEEEeCCCCHHHHHHHhCc---ccceEEEEeccCCCccccC----HHHHHHHHHHcCCcEEEecCCCc--
Confidence 111123566767789999999998 8999999999999999998 99999999999999999998762
Q ss_pred ccCCccccccCCCCccee--eccccccC-CCcceeEEEec
Q 012138 272 RSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLAD 308 (470)
Q Consensus 272 ~~G~~~~~~~~~~~pdi~--s~sK~l~g-G~~~ig~v~~~ 308 (470)
. +-+.......|++ |++|.++| |- .+|.++..
T Consensus 189 --p--yl~rP~~hGADIVvHS~TK~igGhGt-~iGG~iVD 223 (426)
T COG2873 189 --P--YLCRPIEHGADIVVHSATKYIGGHGT-AIGGVIVD 223 (426)
T ss_pred --c--eecchhhcCCCEEEEeecccccCCcc-ccceEEEe
Confidence 1 1133333345776 78899986 65 77777754
No 325
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.68 E-value=2.1e-15 Score=151.38 Aligned_cols=288 Identities=15% Similarity=0.149 Sum_probs=172.6
Q ss_pred CCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccc
Q 012138 114 FYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAI 193 (470)
Q Consensus 114 ~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 193 (470)
..++...++++.++++.|.+..++++||++|+.+++..+.. +|+ .||+....|.+........-...+
T Consensus 66 ~~~pt~~~le~~la~l~g~~~~v~fsSG~~Ai~~al~~ll~---------~Gd-~VI~~~~~y~~t~~~~~~~l~~~G-- 133 (437)
T PRK05613 66 LTNPTVEALENRIASLEGGVHAVAFASGQAAETAAILNLAG---------AGD-HIVTSPRLYGGTETLFLVTLNRLG-- 133 (437)
T ss_pred ccChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHhcC---------CCC-EEEECCCccHHHHHHHHHHHHhcC--
Confidence 45677899999999999988899999999999988876543 466 666666675443111100000000
Q ss_pred cCCCCCCCCeeeec-CCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcc
Q 012138 194 RGFGPLLPGHLKVD-FGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR 272 (470)
Q Consensus 194 ~~~~~~~~~~~~~~-~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~ 272 (470)
..+..++ .+|++++++++++ ++++|++|.+.||+|.+.| +++|.++|+++|+++|+|.+|+.
T Consensus 134 -------i~v~~vd~~~d~e~l~~~l~~---~tk~V~~e~~~Np~~~v~d----i~~I~~la~~~gi~livD~t~a~--- 196 (437)
T PRK05613 134 -------IEVTFVENPDDPESWQAAVQP---NTKAFFGETFANPQADVLD----IPAVAEVAHRNQVPLIVDNTIAT--- 196 (437)
T ss_pred -------eEEEEECCCCCHHHHHHhCCc---cCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCeEEEECCCcc---
Confidence 1123332 2378999998876 7889999888999999998 99999999999999999999862
Q ss_pred cCCccccccCCCCccee--eccccccC-CCcceeEEEe-cHHHH------------------------------------
Q 012138 273 SGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLA-DKEVM------------------------------------ 312 (470)
Q Consensus 273 ~G~~~~~~~~~~~pdi~--s~sK~l~g-G~~~ig~v~~-~~~~~------------------------------------ 312 (470)
|.......+|. |++ ++.|.++| |- .+|.+++ +.+..
T Consensus 197 -g~~~~p~~~Ga--Divv~S~~K~l~G~gd-~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (437)
T PRK05613 197 -AALVRPLELGA--DVVVASLTKFYTGNGS-GLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGL 272 (437)
T ss_pred -ccccChHHhCC--CEEEeeccceecCCCc-ceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHH
Confidence 21111112343 666 55598886 43 4444443 32210
Q ss_pred hhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh----hCCCceE---------E-Eecc
Q 012138 313 LCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYVK---------E-VRGR 378 (470)
Q Consensus 313 ~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~----~~p~~~~---------~-~~~~ 378 (470)
+.............+|..+..+...|+.+. -..++..+++..+.+.|++... .||.... . ..+.
T Consensus 273 ~~~~~~~~~~G~~~~p~~a~l~~rgl~TL~--lR~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~~g~ 350 (437)
T PRK05613 273 KARAGLLRDTGATLSPFNAWVTAQGLDTLS--LRLERHNENAIKVAEFLNNHEKVAKVNFAGLKDSPWYATKEKLGLKYT 350 (437)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHcccCcHH--HHHHHHHHHHHHHHHHHHcCCCcceEECCCCCCCccHHHHHHhcCCCC
Confidence 000000112233467777776665555442 2344555556666666665321 2221110 1 1245
Q ss_pred ceeEEEEeccCCCchhHHHHHHHHHHcCceec----------cC-----------------CCCEEEEecCCCCCHHHHH
Q 012138 379 GLFNAVEFDKTALPVSAYDICLKMKERGILAK----------PT-----------------HDTIVRLTPPLSISSNELQ 431 (470)
Q Consensus 379 g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----------~~-----------------~~~~iR~~~~~~~t~e~i~ 431 (470)
|.++.+++.... ..+..|++.|.--.+..+ |. .++.|||++.+ |+.+
T Consensus 351 gg~~sf~l~~~~--~~~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGl----E~~~ 424 (437)
T PRK05613 351 GSVLSFDIKGGK--DEAWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGITQATVRLSVGI----EDID 424 (437)
T ss_pred ceEEEEEecCCH--HHHHHHHHhCCcceEccCCCCCchhhcCCCccCCccCCHHHHHhcCCCCCeEEEEecc----CCHH
Confidence 788999885321 245566665542211111 11 15789999554 6777
Q ss_pred HHHHHHHHHHh
Q 012138 432 EGSKALHDVLE 442 (470)
Q Consensus 432 ~~~~~l~~~l~ 442 (470)
++++.|.++|+
T Consensus 425 dLi~Dl~~Al~ 435 (437)
T PRK05613 425 DIIADLEGGFA 435 (437)
T ss_pred HHHHHHHHHHh
Confidence 88888887776
No 326
>PRK04311 selenocysteine synthase; Provisional
Probab=99.68 E-value=7.1e-14 Score=140.84 Aligned_cols=313 Identities=17% Similarity=0.176 Sum_probs=188.4
Q ss_pred CCHHHHHHHHHHHHHccccCC----CCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCc
Q 012138 92 CHPKIMKALQEQAEKLTLSSR----AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEA 167 (470)
Q Consensus 92 ~~p~v~~a~~~~~~~~~~~~~----~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~ 167 (470)
-++++.+++.+.+..+..... ....+....+++.+++++|.+.+++++||+.|+..++..+ . +|+
T Consensus 98 l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Gae~a~vv~sgtaAl~l~l~~l-~---------~Gd- 166 (464)
T PRK04311 98 LSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTGAEDALVVNNNAAAVLLALNAL-A---------AGK- 166 (464)
T ss_pred CCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHh-C---------CCC-
Confidence 458899999998876531100 0112335688999999999999999999999999888643 2 466
Q ss_pred EEEEEccC-cc-ccccc---hhcccCCcccccCCCCCCCCeeeecC---CCHHHHHHHHHhcCCCeEEEEEccccCC--C
Q 012138 168 IIVSCCGC-FH-GRTLA---AISMSCDNEAIRGFGPLLPGHLKVDF---GDITALEKIFKESGDQIAGFLFEPIQGE--A 237 (470)
Q Consensus 168 ~ii~~~~~-yh-g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~~Le~~l~~~~~~~~~vi~epi~n~--~ 237 (470)
.||+.+.. |+ |.... .+...+.. ...+++ .+++++++++++ +|++|+++...|+ +
T Consensus 167 eVIvs~~e~~~~ggs~~i~~~~~~~G~~------------l~~v~~~~~t~~~dle~aI~~---~TklV~~vh~sN~~i~ 231 (464)
T PRK04311 167 EVIVSRGELVEIGGAFRIPDVMRQAGAR------------LVEVGTTNRTHLRDYEQAINE---NTALLLKVHTSNYRIE 231 (464)
T ss_pred EEEEcchhhhhcCcchhhHHHHHHCCcE------------EEEECCCCCCCHHHHHHhcCc---cCeEEEEEcCCCcccc
Confidence 45554442 32 22111 11111111 122222 268899999976 7899998877776 3
Q ss_pred c--cccCChhhHHHHHHHHHhcCcEEEEeccccCCcccC------CccccccCCCCcceeecc--ccccCCCcceeEEEe
Q 012138 238 G--VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG------RMLASDWEEVRPDMVILG--KALGGGVIPVSAVLA 307 (470)
Q Consensus 238 G--~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G------~~~~~~~~~~~pdi~s~s--K~l~gG~~~ig~v~~ 307 (470)
| ...| +++|.++|++||+++|+|...+-++..+ .....+......|+++|| |.++|. ..|++++
T Consensus 232 G~~~~~d----l~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp--~~G~i~g 305 (464)
T PRK04311 232 GFTKEVS----LAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGP--QAGIIVG 305 (464)
T ss_pred ccCCcCC----HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCC--ceEEEEE
Confidence 4 5666 9999999999999999999543222111 111111122346898887 888765 5788889
Q ss_pred cHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh--hhH------------HHHHHHHHHHHHHHHHHHHhhCCCc-e
Q 012138 308 DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKL------------AERSAHLGEELRQHLFKIQQQFPNY-V 372 (470)
Q Consensus 308 ~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~------------~~~~~~~~~~l~~~L~~l~~~~p~~-~ 372 (470)
++++++.++.......+...-...++..++|....+ +.+ .++.++++..+.+.|+..... .. +
T Consensus 306 ~~~li~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~--~~~~ 383 (464)
T PRK04311 306 KKELIARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGA--AFAV 383 (464)
T ss_pred cHHHHHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCC--CeeE
Confidence 999998876433333333344555555555553321 111 144455566666666553210 01 1
Q ss_pred EEEe-----cccee-------EEEEeccCCCchhHHHHHHHHHHc--CceeccCCCCEEEEecCCCCCHHHHHHHHHHHH
Q 012138 373 KEVR-----GRGLF-------NAVEFDKTALPVSAYDICLKMKER--GILAKPTHDTIVRLTPPLSISSNELQEGSKALH 438 (470)
Q Consensus 373 ~~~~-----~~g~~-------~~~~~~~~~~~~~~~~~~~~l~~~--Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~ 438 (470)
..+. |.|.+ +.+.+... +.++.++.++|++- .|+.. ...+.+.+-+ ....++|++.++++|.
T Consensus 384 ~~~~~~~~~gggs~p~~~~~~~~v~~~~~--~~~~~~l~~~lr~~~~~i~~r-~~~~~~~ld~-r~~~~~~~~~~~~~~~ 459 (464)
T PRK04311 384 EVVPSFSQVGGGSLPVDRLPSAAVTLTPK--DRSLEALAARLRLLPPPVIGR-IEDGRLLLDL-RTLEEEDEERLAAALL 459 (464)
T ss_pred EEEEccCccCCCCCcCCCCCeEEEEEeCC--CCCHHHHHHHHhcCCCCEEEE-EECCEEEEEe-CcCCHHHHHHHHHHHH
Confidence 1111 11221 22333322 23678899999875 45554 3466677765 4678899999999999
Q ss_pred HHHh
Q 012138 439 DVLE 442 (470)
Q Consensus 439 ~~l~ 442 (470)
+++.
T Consensus 460 ~~~~ 463 (464)
T PRK04311 460 EALN 463 (464)
T ss_pred HHhh
Confidence 8875
No 327
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.67 E-value=3.9e-15 Score=146.97 Aligned_cols=309 Identities=14% Similarity=0.135 Sum_probs=184.7
Q ss_pred CCHHHHHHHHHHHHHc---cccCCCCCCCcHHHHHHHHhhhhCC--C-eEEec-CChhHHHHHHHHHHHHhchhcccCCC
Q 012138 92 CHPKIMKALQEQAEKL---TLSSRAFYNDKFPVFAERLTSMFGY--D-MVLPM-NTGAEGVETALKLARKWGYVKKKFSI 164 (470)
Q Consensus 92 ~~p~v~~a~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~--~-~v~~~-~sGteA~~~al~~~~~~~~~~~~~~~ 164 (470)
-+|+|++++....... .+... -..+...+..+.++++++. + +|+|+ +|||.++++++..+..
T Consensus 14 ~~~~v~~a~~~~~~~~~~~~hr~~-~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~---------- 82 (361)
T TIGR01366 14 VRLEQLQALTTTAASLFGTSHRQA-PVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIE---------- 82 (361)
T ss_pred CCHHHHHHHHhcCccccccCcCCh-HHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhccc----------
Confidence 5688999876542111 11111 1234566778888888875 2 57775 7799999999976532
Q ss_pred CCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCCh
Q 012138 165 DEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPD 244 (470)
Q Consensus 165 g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~ 244 (470)
++ .+++..+.| |....-.+... +.. .. ......+. .+.++..+. +++++|.+....|.+|.+.|
T Consensus 83 ~~-~l~i~~G~~-~~~~~~~a~~~-~~~----~~--~~~~~~~~--~~~~~~~~~---~~~~lV~~~h~et~tG~~~p-- 146 (361)
T TIGR01366 83 KK-SLHLSFGEF-SSKFAKAVKLA-PWL----GE--PIIVTADP--GSAPEPQAD---PGVDVIAWAHNETSTGVAVP-- 146 (361)
T ss_pred cc-ccEEecCHH-HHHHHHHHHhh-hcc----CC--ceEEecCC--CCCCCCccC---CCCCEEEEcccCCccceecc--
Confidence 22 333333443 32222111110 000 00 00111111 112222222 37899999998999999997
Q ss_pred hhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecc--ccccCCCcceeEEEecHHHHhhcCcCCc--
Q 012138 245 GYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEH-- 320 (470)
Q Consensus 245 ~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~s--K~l~gG~~~ig~v~~~~~~~~~~~~~~~-- 320 (470)
+++| ++++|+++|+|.+|+ +| +.....+ . .|++++| |.+++-- .++.++.++++.+.+.+...
T Consensus 147 --i~~I---~~~~g~~~iVDavqs-~g--~~~idv~--~--~D~~~~s~~K~lg~~~-Gl~~~~~s~~~~~~~~~~~~~~ 213 (361)
T TIGR01366 147 --VRRP---EGSDDALVVIDATSG-AG--GLPVDIA--E--TDVYYFAPQKNFASDG-GLWLAIMSPAALERIEAIAASG 213 (361)
T ss_pred --cccc---cccCCCeEEEEcCcc-cc--CCCCCHH--H--CCEEEEEchhhcCCCC-ceEEEEECHHHHhhhhcccCCC
Confidence 7665 689999999999998 21 1222222 2 4877666 8887422 34556678887766542111
Q ss_pred ------------------cCC-CCCCHHHHHHHHHHHHHHhh----hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEe-
Q 012138 321 ------------------GST-FGGNPLASAVAIASLDVIRD----EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR- 376 (470)
Q Consensus 321 ------------------~~t-~~~~~~~~aaa~a~l~~~~~----~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~- 376 (470)
+.+ ++.+.....+..++++++.+ +...++.+++.+++++.|.++....+ ......
T Consensus 214 ~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~-~~~~~~~ 292 (361)
T TIGR01366 214 RWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATP-FVTDPGK 292 (361)
T ss_pred CCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCccc-CCCChhh
Confidence 122 23445555577778888765 33556677778888888877642110 111110
Q ss_pred ccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCC----CCEEEEecCCCCCHHHHHHHHHHHHHHHhccc
Q 012138 377 GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 377 ~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~----~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 445 (470)
.......+.+.. +.+..++.+.|.++||.+.++. .+.+|++....+|++||+++++.|+++++ ++
T Consensus 293 ~s~~v~~v~~~~---g~~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~-~~ 361 (361)
T TIGR01366 293 RSQVVGTIDFVD---DIDAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVE-RL 361 (361)
T ss_pred cccceEEEECCC---ccCHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHh-hC
Confidence 111222333332 2477889999999999987652 56799999999999999999999999987 53
No 328
>PLN03032 serine decarboxylase; Provisional
Probab=99.67 E-value=6.7e-14 Score=137.29 Aligned_cols=281 Identities=15% Similarity=0.086 Sum_probs=175.7
Q ss_pred cHHHHHHHHhhhhCC--CeE--EecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccc
Q 012138 118 KFPVFAERLTSMFGY--DMV--LPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAI 193 (470)
Q Consensus 118 ~~~~l~~~l~~~~~~--~~v--~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 193 (470)
...++.++++++++. +.+ +||+||||||..++..++.+. ++. .| +....-|-+...+....+....
T Consensus 67 ~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~-------~~~-~v-i~s~~~H~Sv~kaa~~lg~~~~- 136 (374)
T PLN03032 67 FEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVF-------PDG-IL-YASRESHYSVFKAARMYRMEAV- 136 (374)
T ss_pred HHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhC-------CCc-EE-EeCCCceeHHHHHHHHcCCCCe-
Confidence 345677788888875 345 999999999999999887631 122 33 4444447666655444332111
Q ss_pred cCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcC-----cEEEEecccc
Q 012138 194 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN-----ILMIADEIQS 268 (470)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~g-----illI~Dev~~ 268 (470)
..|..+ ...+ |+++|+++|++...++.+|++...++++|.+.| +++|.++|++|| +++++|.+|+
T Consensus 137 --~V~~d~-~g~i---d~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp----i~eI~~i~~~~g~~~~~~~lHvDaA~g 206 (374)
T PLN03032 137 --KVPTLP-SGEI---DYDDLERALAKNRDKPAILNVNIGTTVKGAVDD----LDRILRILKELGYTEDRFYIHCDGALF 206 (374)
T ss_pred --EeeeCC-CCcC---cHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC----HHHHHHHHHHhCCCCCCeeEEEEccch
Confidence 111111 1123 899999999864335777878778999999999 999999999997 5899999998
Q ss_pred CCc-c-c--CCccccccCCCCcceeecc--ccccCCCcceeEEEecHHHHhhcCcC-----CccCCCCC--CHHHHHHHH
Q 012138 269 GLA-R-S--GRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPG-----EHGSTFGG--NPLASAVAI 335 (470)
Q Consensus 269 g~g-~-~--G~~~~~~~~~~~pdi~s~s--K~l~gG~~~ig~v~~~~~~~~~~~~~-----~~~~t~~~--~~~~~aaa~ 335 (470)
|+- . . -..+.+. ...|.++++ |.++... ++|+++.+++..+.+... ....|..+ +....+.++
T Consensus 207 g~~~p~~~~~~~~~~~---~~vDSis~s~HK~~g~P~-g~G~ll~r~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w 282 (374)
T PLN03032 207 GLMMPFVSRAPEVTFR---KPIGSVSVSGHKFLGCPM-PCGVALTRKKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLW 282 (374)
T ss_pred hhhhhccCCCcccCCC---cCCcEEEECcccccCCCc-CeEEEEEEchhhHhhccCCcccCCCCCcccCCCchHHHHHHH
Confidence 631 1 0 1111111 135777776 6555465 899999988776655321 11123333 334566677
Q ss_pred HHHHHHhhhh---HHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccC
Q 012138 336 ASLDVIRDEK---LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT 412 (470)
Q Consensus 336 a~l~~~~~~~---~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~ 412 (470)
++|+.+..+. +.++..++++++.+.|++.. ......+....+.+ ..+. ... ..+|..+.+.
T Consensus 283 ~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~-----~~~~~~p~~~~V~f--~~~~----~~~-----~~~~w~l~~~ 346 (374)
T PLN03032 283 YTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAG-----LTCRLNELSSTVVF--ERPM----DEA-----FIKKWQLACE 346 (374)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCC-----CcEEECCCceEEEE--cCCC----cHh-----Hhheeeeccc
Confidence 7777766544 55566667777888777641 22222334333333 3221 111 2246555543
Q ss_pred CCCEEEEecCCCCCHHHHHHHHHHHHH
Q 012138 413 HDTIVRLTPPLSISSNELQEGSKALHD 439 (470)
Q Consensus 413 ~~~~iR~~~~~~~t~e~i~~~~~~l~~ 439 (470)
.+.+|++....++++.++++++.|++
T Consensus 347 -~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 347 -GDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred -CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 45899988877889999999988865
No 329
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.67 E-value=6.5e-14 Score=151.63 Aligned_cols=341 Identities=14% Similarity=0.117 Sum_probs=201.5
Q ss_pred CeEEeccCCcccccCCCCCHHHHHH-HHHHHHHccccCCCC------CCCcHHHHHHHHhhhhCC---C-eEEecCChhH
Q 012138 75 NKYLDFLSAYSAVNQGHCHPKIMKA-LQEQAEKLTLSSRAF------YNDKFPVFAERLTSMFGY---D-MVLPMNTGAE 143 (470)
Q Consensus 75 ~~~lD~~~~~~~~~lG~~~p~v~~a-~~~~~~~~~~~~~~~------~~~~~~~l~~~l~~~~~~---~-~v~~~~sGte 143 (470)
..|+|..+... .+|..+++ +.+.+.....++... ..+..++..+.++++++. + .|+||+|+|+
T Consensus 35 ~iYLD~Aatt~------~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~ 108 (805)
T PLN02724 35 VVYLDHAGATL------YSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATA 108 (805)
T ss_pred CEeEeCCCCCC------CCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHH
Confidence 57888765521 23444444 444444332222111 123456677888888874 3 4899999999
Q ss_pred HHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCC-------CeeeecCCCHHHHHH
Q 012138 144 GVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLP-------GHLKVDFGDITALEK 216 (470)
Q Consensus 144 A~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~d~~~Le~ 216 (470)
|+..+...+. + .+|+ .||+.... |.+......+....+....+.+... +...+. .+.++|++
T Consensus 109 alnlva~~l~-~-------~~gd-~Iv~t~~e-H~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~-~~~~~l~~ 177 (805)
T PLN02724 109 ALKLVGETFP-W-------SSES-HFCYTLEN-HNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVV-VKSRGLQR 177 (805)
T ss_pred HHHHHHHHCC-C-------CCCC-eEEEeecc-ccchHHHHHHHHHcCCeEEeccchhccccccccccccc-cchhhhhh
Confidence 9998866441 1 1455 45554333 5554433322111111111111110 000000 01245665
Q ss_pred HHH----h---cCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhc--------CcEEEEeccccCCcccCCcccccc
Q 012138 217 IFK----E---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY--------NILMIADEIQSGLARSGRMLASDW 281 (470)
Q Consensus 217 ~l~----~---~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~--------gillI~Dev~~g~g~~G~~~~~~~ 281 (470)
.++ . ..+++++|.+..+.|.+|.+.| ++.+..+++.. ++++++|.+|+ + |.. .++.
T Consensus 178 ~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~p----i~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~-~---g~~-piDv 248 (805)
T PLN02724 178 RNTSKLQKREDDGEAYNLFAFPSECNFSGAKFP----LDLVKLIKDNQHSNFSKSGRWMVLLDAAKG-C---GTS-PPDL 248 (805)
T ss_pred hhhhhhccccccCCCcceEEEEccccCCCCcCC----HHHHHHHHHhcccccccCcceEEEeehhhh-c---CCC-CCCh
Confidence 532 1 1135688889999999999997 76654444422 36899999997 2 211 1222
Q ss_pred CCCCcceeecc--ccccCCCcceeEEEecHHHHhhcCcCCccC-C---------C--------------CCCHHHHHHHH
Q 012138 282 EEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEHGS-T---------F--------------GGNPLASAVAI 335 (470)
Q Consensus 282 ~~~~pdi~s~s--K~l~gG~~~ig~v~~~~~~~~~~~~~~~~~-t---------~--------------~~~~~~~aaa~ 335 (470)
..+.+|++++| |.+++.. .+|++++++++.+.+.+...++ + + +.|.++++++.
T Consensus 249 ~~~~~Dfl~~S~HK~~GgP~-G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~ 327 (805)
T PLN02724 249 SRYPADFVVVSFYKIFGYPT-GLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALR 327 (805)
T ss_pred hhcCCCEEEEecceeccCCC-CceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHH
Confidence 23456888776 8777554 7899999998877766532221 1 1 36777777888
Q ss_pred HHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhCC-CceEEE---------eccceeEEEEeccCCC-chhHHHHHHH
Q 012138 336 ASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFP-NYVKEV---------RGRGLFNAVEFDKTAL-PVSAYDICLK 401 (470)
Q Consensus 336 a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~p-~~~~~~---------~~~g~~~~~~~~~~~~-~~~~~~~~~~ 401 (470)
++++.+.+ +.+.++.+.+.+++.+.|.++....+ +.+... ..++.++.|.+..... .....++...
T Consensus 328 aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l 407 (805)
T PLN02724 328 HGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKL 407 (805)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHH
Confidence 88888765 66888899999999999988742100 012211 1356677776654321 1223445555
Q ss_pred HHHcCceeccCC---------------------------------------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 402 MKERGILAKPTH---------------------------------------DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 402 l~~~Gv~~~~~~---------------------------------------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
+.+.||.++.|. .+.+|+|+.+..|++||+++++.|++.+-
T Consensus 408 ~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~ 487 (805)
T PLN02724 408 ASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFV 487 (805)
T ss_pred HHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhh
Confidence 556688875321 27799999999999999999999999875
No 330
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.67 E-value=3.5e-14 Score=150.14 Aligned_cols=306 Identities=15% Similarity=0.167 Sum_probs=189.6
Q ss_pred HHHHHHHHhhhhCCCeEEecC-ChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCC
Q 012138 119 FPVFAERLTSMFGYDMVLPMN-TGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFG 197 (470)
Q Consensus 119 ~~~l~~~l~~~~~~~~v~~~~-sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~ 197 (470)
..++++++++++|.+.+-+.. +|+.+..+++.+++.| +..+|. +++++|++.. +-|+.........+-... ..
T Consensus 545 i~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~y-h~~~Ge-~~r~~vLIp~-saHgtNpasa~~~GieVv---~V 618 (954)
T PRK12566 545 IDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRY-HRSRGQ-SQRDICLIPS-SAHGTNPASAQMAGMRVV---IV 618 (954)
T ss_pred HHHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHH-HHhcCC-CCCCEEEecc-cccccCHHHHHHCCCEEE---Ee
Confidence 457889999999999886665 7888888888887764 233332 3455665555 447766544333322111 11
Q ss_pred CCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-CCcccCCc
Q 012138 198 PLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRM 276 (470)
Q Consensus 198 ~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g~g~~G~~ 276 (470)
+...+ ..+ |+++|+++++++.+++++|++..+++-++...+ +++|.++|+++|+++++|-++. +.+....
T Consensus 619 p~D~~-G~i---Dle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~----V~eI~~iah~~Galv~vDgA~~~a~~~l~~- 689 (954)
T PRK12566 619 ECDPD-GNV---DLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEG----IREICEVVHQHGGQVYMDGANLNAQVGLAR- 689 (954)
T ss_pred ccCCC-CCc---CHHHHHHHhhccCCCEEEEEEEecCcCceecch----HHHHHHHHHHcCCEEEEEeeChhhccCCCC-
Confidence 11111 122 899999999865568999987764544444444 9999999999999999999997 2221110
Q ss_pred cccccCCCCcceeecc--cccc-----CCCcceeEEEecHHHHhhcCcCC----------cc---CCCCCCHHHHHHHHH
Q 012138 277 LASDWEEVRPDMVILG--KALG-----GGVIPVSAVLADKEVMLCIQPGE----------HG---STFGGNPLASAVAIA 336 (470)
Q Consensus 277 ~~~~~~~~~pdi~s~s--K~l~-----gG~~~ig~v~~~~~~~~~~~~~~----------~~---~t~~~~~~~~aaa~a 336 (470)
...+ ..|+++++ |+++ ||. .+|.+.+.+++...+.... .+ ....++.+...++..
T Consensus 690 --Pg~~--GADi~~~s~HKtf~~P~G~GGP-~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~ 764 (954)
T PRK12566 690 --PADI--GADVSHMNLHKTFCIPHGGGGP-GMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILPISWM 764 (954)
T ss_pred --hhhc--CCCEEEecCCcccCcCccCCCC-ccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHHHHHHH
Confidence 1223 34887665 8876 454 6777777776655544210 11 112233333445555
Q ss_pred HHHHHhhhhHHHH---HHHHHHHHHHHHHHHHhhCCCceEEEeccce-eEEEEeccCC----CchhHHHHHHHHHHcCce
Q 012138 337 SLDVIRDEKLAER---SAHLGEELRQHLFKIQQQFPNYVKEVRGRGL-FNAVEFDKTA----LPVSAYDICLKMKERGIL 408 (470)
Q Consensus 337 ~l~~~~~~~~~~~---~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~-~~~~~~~~~~----~~~~~~~~~~~l~~~Gv~ 408 (470)
.++.+..+ +.+. ...+++++.++|.+. ++ ... ....+. +.-+.++... .+.+..++.++|.+.||.
T Consensus 765 Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~---~~-v~~-~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d~Gih 838 (954)
T PRK12566 765 YIAMMGPQ-LADASEVAILSANYLANQLGGA---FP-VLY-RGRNERVAHECILDLRPLKAQTGISEEDVAKRLMDYGFH 838 (954)
T ss_pred HHHHHCHH-HHHHHHHHHHHHHHHHHHhHhh---CC-CCc-CCCCCCeeeEEEEEccccccccCCCHHHHHHHHHHCCcE
Confidence 55555544 3332 245788888888662 22 111 111111 1111112110 124668899999998987
Q ss_pred ec----cCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccCCCCCCC
Q 012138 409 AK----PTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRKPK 452 (470)
Q Consensus 409 ~~----~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~~~~~~ 452 (470)
.. |. .+.+|++|....+++|||+++++|..+.+ |++++...+
T Consensus 839 apt~~fPv-~~~LmIepTE~eskeEIDrf~eAL~~I~~-e~~~v~~g~ 884 (954)
T PRK12566 839 APTMSFPV-PGTLMVEPTESESKAELDRFVEAMLSIRA-EIGKVQEGN 884 (954)
T ss_pred EeEEeecc-CCEEEEEeeeeCCHHHHHHHHHHHHHHHH-HHHHHHcCC
Confidence 54 33 77899999999999999999999999999 887766544
No 331
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.66 E-value=8.2e-14 Score=150.85 Aligned_cols=307 Identities=14% Similarity=0.141 Sum_probs=186.7
Q ss_pred HHHHHHHHhhhhCCCeEEec-CChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCC
Q 012138 119 FPVFAERLTSMFGYDMVLPM-NTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFG 197 (470)
Q Consensus 119 ~~~l~~~l~~~~~~~~v~~~-~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~ 197 (470)
..++.+++++++|.+.+.+. ++|++|+.+++.+++.+.. ++|. .++.+|++.+.. |++...+..+.+-... +.
T Consensus 544 i~e~q~~l~eltG~d~~sl~~~~ga~ge~agL~a~r~~~~-~~G~-~~r~~vlis~~a-H~snp~sa~~~G~~vv---~v 617 (954)
T PRK05367 544 IDQLEAWLAEITGYDAVSLQPNAGAQGEYAGLLAIRAYHE-SRGE-GHRDVCLIPSSA-HGTNPASAVMAGMKVV---VV 617 (954)
T ss_pred HHHHHHHHHHHHCCCCEEECccHHHHHHHHHHHHHHHHhh-ccCC-CCCCEEEEEchh-hhhhHHHHHHCCCEEE---EE
Confidence 45788899999999887665 5677888777766665321 2221 123356555555 8776555444332211 11
Q ss_pred CCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-CCcccCCc
Q 012138 198 PLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRM 276 (470)
Q Consensus 198 ~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g~g~~G~~ 276 (470)
+...+ ..+ |+++|++++++++.++++|++....+.++...| +++|.++|+++|+++++|.+|. ++...-
T Consensus 618 ~~d~~-G~i---D~~~L~~~i~~~~~~la~V~it~pst~G~~e~~----I~eI~~i~h~~G~~v~VDgA~~~al~~l~-- 687 (954)
T PRK05367 618 ACDEN-GNI---DLDDLRAKAEEHADNLAAIMITYPSTHGVFEET----IREICEIVHEHGGQVYLDGANMNAQVGLA-- 687 (954)
T ss_pred CCCCC-CCc---CHHHHHHHHhccCCCeEEEEEEcCCCCeeecCC----HHHHHHHHHHcCCEEEEECcChhhccCCC--
Confidence 11111 122 799999999875456888876553444333466 9999999999999999999996 321100
Q ss_pred cccccCCCCcceeecc--cccc-----CCCcceeEEEecHHHHhhcCcCCc--------cCCCCCCHH----HHHHHHHH
Q 012138 277 LASDWEEVRPDMVILG--KALG-----GGVIPVSAVLADKEVMLCIQPGEH--------GSTFGGNPL----ASAVAIAS 337 (470)
Q Consensus 277 ~~~~~~~~~pdi~s~s--K~l~-----gG~~~ig~v~~~~~~~~~~~~~~~--------~~t~~~~~~----~~aaa~a~ 337 (470)
....+| .|+++++ |.++ ||- .+|.+.+++.+...+..... .++....+. ....++..
T Consensus 688 -~pg~~G--ADi~~~s~HK~f~~P~G~GGP-g~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~y 763 (954)
T PRK05367 688 -RPGDIG--ADVSHLNLHKTFCIPHGGGGP-GVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMY 763 (954)
T ss_pred -ChhhcC--CCEEEecCcccCCCCcCCCCC-ceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHH
Confidence 011233 4777666 8875 454 67888888766554432110 011111222 22224445
Q ss_pred HHHHhhhhHHHHHH---HHHHHHHHHHHHHHhhCCCceEE----EeccceeEEE-EeccCCCchhHHHHHHHHHHcCcee
Q 012138 338 LDVIRDEKLAERSA---HLGEELRQHLFKIQQQFPNYVKE----VRGRGLFNAV-EFDKTALPVSAYDICLKMKERGILA 409 (470)
Q Consensus 338 l~~~~~~~~~~~~~---~~~~~l~~~L~~l~~~~p~~~~~----~~~~g~~~~~-~~~~~~~~~~~~~~~~~l~~~Gv~~ 409 (470)
+..+..+.+++..+ .+++++.++|.+. ++ .... ..-...++-+ .+.. ..+....++.++|.+.|+..
T Consensus 764 i~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~---~~-~~~~~~~~~~~~e~i~~~~~~~~-~~g~~~~di~krL~d~G~~~ 838 (954)
T PRK05367 764 IRMMGAEGLRQATEVAILNANYIAKRLKDH---YP-VLYTGANGRVAHECILDLRPLKE-STGITVDDIAKRLIDYGFHA 838 (954)
T ss_pred HHHHCHHHHHHHHHHHHHHHHHHHHHHHhh---cC-ccccCCCCCcccceEEEeecccc-cCCCCHHHHHHHHHHCCCeE
Confidence 55555566777666 7888999988763 21 1110 0001112222 1111 11236788999999999986
Q ss_pred ccC---CCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccCCCCCC
Q 012138 410 KPT---HDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRKP 451 (470)
Q Consensus 410 ~~~---~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~~~~~ 451 (470)
... ..+.+|++|....|++|||+++++|..+.. ++.++...
T Consensus 839 ~t~~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~-e~~~~~~~ 882 (954)
T PRK05367 839 PTMSFPVAGTLMVEPTESESKAELDRFCDAMIAIRA-EIDEVEAG 882 (954)
T ss_pred eecCCccCCEEEEEeeecCCHHHHHHHHHHHHHHHH-HHHHhhcC
Confidence 432 267899999999999999999999999998 88775443
No 332
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.66 E-value=2e-14 Score=143.28 Aligned_cols=302 Identities=13% Similarity=0.108 Sum_probs=178.7
Q ss_pred CcHHHHHHHHhhhhCCC---eEEecCChh-HHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCccc
Q 012138 117 DKFPVFAERLTSMFGYD---MVLPMNTGA-EGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEA 192 (470)
Q Consensus 117 ~~~~~l~~~l~~~~~~~---~v~~~~sGt-eA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~ 192 (470)
.+..++++++++++|.+ .++++++|| .++.+++.+++.. .++++ .||....+ |-++..++.+.+-...
T Consensus 105 ~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~------~~~gd-~VI~p~~t-h~S~~kAi~~~G~~pv 176 (444)
T TIGR03531 105 KLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHK------RPKAK-YVIWPRID-QKSCIKAISTAGFEPR 176 (444)
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCc------CCCCC-EEEEECcC-hHHHHHHHHHcCCeEE
Confidence 34567888888888877 799999999 6888887765421 01244 66666666 6666666655543211
Q ss_pred ccCCCCC--CCCeeeecCCCHHHHHHHHHhcC-CCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccC
Q 012138 193 IRGFGPL--LPGHLKVDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 269 (470)
Q Consensus 193 ~~~~~~~--~~~~~~~~~~d~~~Le~~l~~~~-~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g 269 (470)
+.+. .++...+ |+++|+++|++.. ..+.+|+..|..++.|...+ +++|.++|++||+++|+|++|+.
T Consensus 177 ---~Vd~~~d~~~~~i---D~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~dd----L~eIa~la~k~gI~lIvDaAyg~ 246 (444)
T TIGR03531 177 ---VIETVLDGDELTT---DVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDD----IEEIAKICANYDIPHIVNNAYGL 246 (444)
T ss_pred ---EeeeeecCcCCCc---CHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhC----HHHHHHHHHHcCCEEEEECcCcC
Confidence 1111 1122223 8999999998643 23444555553344455555 99999999999999999999983
Q ss_pred Cc-ccCCccccccCCC-Cccee--eccccccCCCcceeEEEe-cHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh-
Q 012138 270 LA-RSGRMLASDWEEV-RPDMV--ILGKALGGGVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD- 343 (470)
Q Consensus 270 ~g-~~G~~~~~~~~~~-~pdi~--s~sK~l~gG~~~ig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~- 343 (470)
.. ...... ...... ..|++ ++.|.+.... ..|+++. ++++++.+.....+.. .+...+.+....+..-.+
T Consensus 247 ~~~~~~~~~-~~g~~~Grad~vv~s~hK~l~~pg-~Gg~I~~~d~el~~~i~~~y~g~~--~~s~~~~~~~~ll~~G~~g 322 (444)
T TIGR03531 247 QSNKYMELI-NKAIKVGRVDAVVSSTDKNFMVPV-GGAIIYSFDENFIQEISKSYPGRA--SASPSLDVLITLLSLGSKG 322 (444)
T ss_pred cChhhhhhh-hccccccCCCeEEEeCccCCCCCC-CEEEEEECCHHHHHHHHHhccCCC--CChHHHHHHHHHHHhCHHH
Confidence 21 111110 011111 23655 4558877322 3445555 7778777764322211 222333333333332222
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCce----eccCC-----
Q 012138 344 -EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL----AKPTH----- 413 (470)
Q Consensus 344 -~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~----~~~~~----- 413 (470)
+++.++..++.+++.+.|+++..+++..+-..+....-+++.+..-. +.+...+...|..++|. +.++.
T Consensus 323 ~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~-~~~~~~~g~~l~~~~v~g~r~v~~~~~~~~~ 401 (444)
T TIGR03531 323 YLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLK-GKDPTMLGSMLYSRRVTGPRVVTNGDSKTVG 401 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEeccccc-ccCHHHHHHHHHhCCCCCceeecCCCceEEC
Confidence 56777888899999999999887765333333333333444443211 23577788888888763 22221
Q ss_pred ---------------CCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 012138 414 ---------------DTIVRLTPPLSISSNELQEGSKALHDVL 441 (470)
Q Consensus 414 ---------------~~~iR~~~~~~~t~e~i~~~~~~l~~~l 441 (470)
..++-++..+.++++||+.++++|++++
T Consensus 402 ~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~~ 444 (444)
T TIGR03531 402 GCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred CEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhcC
Confidence 1234444456789999999999999864
No 333
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.66 E-value=2.7e-14 Score=140.95 Aligned_cols=306 Identities=10% Similarity=0.031 Sum_probs=182.2
Q ss_pred CCHHHHHHHHHHHHHccccCCCC----C------CCcHHHHHHHHhhhhCC---CeEEecCC-hhHHHHHHHHHHHHhch
Q 012138 92 CHPKIMKALQEQAEKLTLSSRAF----Y------NDKFPVFAERLTSMFGY---DMVLPMNT-GAEGVETALKLARKWGY 157 (470)
Q Consensus 92 ~~p~v~~a~~~~~~~~~~~~~~~----~------~~~~~~l~~~l~~~~~~---~~v~~~~s-GteA~~~al~~~~~~~~ 157 (470)
.++.|.+++.+.+..+. +.+.. . .+...+..+.++++++. +.++|++| ||+|+++++..+..
T Consensus 10 ~p~~V~~a~~~~~~~~~-~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~--- 85 (355)
T cd00611 10 LPEEVLEQAQKELLDFN-GLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLG--- 85 (355)
T ss_pred CCHHHHHHHHHHHhhcc-cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCC---
Confidence 57999999999886543 22111 1 13356778888888874 35888866 99999999986632
Q ss_pred hcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeec----CCC-HHHHHHHHHhcCCCeEEEEEcc
Q 012138 158 VKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVD----FGD-ITALEKIFKESGDQIAGFLFEP 232 (470)
Q Consensus 158 ~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d-~~~Le~~l~~~~~~~~~vi~ep 232 (470)
++++...+..+.|.-+........+.... ....+ ..+ ++..+..++ +++++|.+..
T Consensus 86 ------~~~~~~~i~~g~~~~~~~~~a~~~g~~~~----------~~~~~~~g~~~~~~~~~~~~~~---~~~~lV~~~h 146 (355)
T cd00611 86 ------DKGTADYVVTGAWSAKAAKEAKRYGGVVV----------IVAAKEEGKYTKIPDVETWDLA---PDAAYVHYCS 146 (355)
T ss_pred ------CCCeEEEEECCHHHHHHHHHHHhcCCCcE----------EEecccccCCCCCCCHhhcCCC---CCCCEEEEeC
Confidence 12222222233332111101011010000 01111 112 222222233 3788888888
Q ss_pred ccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHH
Q 012138 233 IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVM 312 (470)
Q Consensus 233 i~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~ 312 (470)
..|.+|...+ ++++.||+++++|.+|+ +| +.....+.+++ ++.+--|.+| .. .+|.+++++++.
T Consensus 147 ~~t~tG~~~~---------~i~~~~g~~~~VDa~qs-~g--~~~idv~~~~~--~~ss~~K~lG-P~-G~g~l~~~~~~~ 210 (355)
T cd00611 147 NETIHGVEFD---------EVPDTGGVPLVADMSSN-IL--SRPIDVSKFGV--IYAGAQKNLG-PA-GVTVVIVRKDLL 210 (355)
T ss_pred CcccccEEcc---------eecccCCCeEEEEcccc-cc--CCCCCHHHhCE--EEeecccccC-CC-ceEEEEECHHHH
Confidence 8889999763 45666999999999998 21 11223333332 3333458775 43 689999999988
Q ss_pred hhcCcCC-----------ccC-CCCCCHHHHHHHHHHHHHHhhh----hHHHHHHHHHHHHHHHHHHHHhhCCCceEEEe
Q 012138 313 LCIQPGE-----------HGS-TFGGNPLASAVAIASLDVIRDE----KLAERSAHLGEELRQHLFKIQQQFPNYVKEVR 376 (470)
Q Consensus 313 ~~~~~~~-----------~~~-t~~~~~~~~aaa~a~l~~~~~~----~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~ 376 (470)
+.+.+.. ... .+++|.....+..++++++.+. .+.++.+++.+++++.|+++..-+. ......
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~-~~~~~~ 289 (355)
T cd00611 211 GKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYR-GPVDKR 289 (355)
T ss_pred hhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccc-cCCCHH
Confidence 7765421 111 2356777888888899987653 4566777788888888877621110 011101
Q ss_pred cc-ceeEEEEeccCCCchhHHHHHHHHHHcCceeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHH
Q 012138 377 GR-GLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDV 440 (470)
Q Consensus 377 ~~-g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~--~~~iR~~~~~~~t~e~i~~~~~~l~~~ 440 (470)
.+ +..+.+.++... ...++...+.++|+.+.++. .+.+|+++...+|+|||+++++.|+++
T Consensus 290 ~rs~~vvsf~~~~~~---l~~~~~~~~~r~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 290 ARSRMNVPFRLGKEE---LEKEFLKEAEAAGMIGLKGHRSVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred HcCceEEEEEcCChh---hhHHHHHHHHHCCCcccCCCcccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 12 234555444311 22455567888999865553 478999999999999999999999885
No 334
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.65 E-value=8.4e-15 Score=144.61 Aligned_cols=284 Identities=16% Similarity=0.216 Sum_probs=173.2
Q ss_pred CCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchh-cccCCccc
Q 012138 114 FYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAI-SMSCDNEA 192 (470)
Q Consensus 114 ~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~-~~~~~~~~ 192 (470)
..++...+|++.++++.|.+.++.++||+.|+.+++..+.+ +|+ .||+....|.+ +.... ..-...+
T Consensus 61 ~~~P~~~~lE~~la~leg~~~av~~sSG~aAi~~al~all~---------~GD-~Vl~~~~~yg~-t~~~~~~~~~~~G- 128 (384)
T PRK06434 61 WGNPTVQAFEEKYAVLENAEHALSFSSGMGAITSAILSLIK---------KGK-RILSISDLYGQ-TFYFFNKVLKTLG- 128 (384)
T ss_pred CCChhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhC---------CCC-EEEEecCccch-HHHHHHHHHHhcC-
Confidence 45778899999999999999999999999999999987654 566 55555555433 22221 1000000
Q ss_pred ccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcc
Q 012138 193 IRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR 272 (470)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~ 272 (470)
..+.+++.++.+.++ ++. +++++|++|.+.||++.+.+ +++|.++|++++ +++|.+++.- .
T Consensus 129 --------i~v~fvd~~~~~~~~--l~~--~~tklv~~e~~snpt~~v~D----i~~I~~la~~~~--lvVD~t~~s~-~ 189 (384)
T PRK06434 129 --------IHVDYIDTDRLNSLD--FDP--SNYDLIYAESITNPTLKVPD----IKNVSSFCHEND--VIVDATFASP-Y 189 (384)
T ss_pred --------cEEEEECCCChhhee--ecC--CCeeEEEEEcCCCCCceeec----HHHHHHHHHHcC--eEEECCCCCc-c
Confidence 112344333333443 222 36899999999999999998 999999999998 4669997521 1
Q ss_pred cCCccccccCCCCcceeecc--ccccC-CCcceeEEEe-cHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhhhHHH
Q 012138 273 SGRMLASDWEEVRPDMVILG--KALGG-GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAE 348 (470)
Q Consensus 273 ~G~~~~~~~~~~~pdi~s~s--K~l~g-G~~~ig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~ 348 (470)
.++ ..+...|++++| |.++| |=.-.|+++. ++++.+.++..........+++.++.+...|+.+ +...+
T Consensus 190 ~~~-----pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~tL--~~R~~ 262 (384)
T PRK06434 190 NQN-----PLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALRGLKTL--GLRME 262 (384)
T ss_pred cCC-----chhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhCCCcH--HHHHH
Confidence 222 223345777555 88875 3113555655 5566565543221223345777777776666554 33566
Q ss_pred HHHHHHHHHHHHHHHHHh----hCCCc---eEEEeccceeEEEEeccCCCchhHHHHHHHHHH--cCceec--------c
Q 012138 349 RSAHLGEELRQHLFKIQQ----QFPNY---VKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE--RGILAK--------P 411 (470)
Q Consensus 349 ~~~~~~~~l~~~L~~l~~----~~p~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~--~Gv~~~--------~ 411 (470)
+..+++..+.+.|+.... .||.. -....+.|.++.++++.. ..+.+|.+.|.- .++... |
T Consensus 263 r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~~---~~~~~f~~~l~l~~~~~slG~~~sl~~~p 339 (384)
T PRK06434 263 KHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRSM---EDVHKFIRNLEIPMVAASLGGVESLITLP 339 (384)
T ss_pred HHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECCH---HHHHHHHHhCCcceEccCCCCCCeeeECC
Confidence 667777777777765321 12210 001236688999988632 245566665541 121111 1
Q ss_pred C-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 412 T-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 412 ~-----------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
. .++.|||++.+ |+++.+++-|.++|.
T Consensus 340 ~~~~h~~~~~e~~~~~gi~~~liRlsvGl----Ed~~dLi~dl~~Al~ 383 (384)
T PRK06434 340 VETSHSSLSPEERERLGISDNLVRFSIGI----EDIDDLIKDIENALS 383 (384)
T ss_pred CccccccCCHHHHHhcCCCcCeEEEEeCc----CCHHHHHHHHHHHhc
Confidence 1 15689999554 567888888877775
No 335
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.65 E-value=2.5e-13 Score=136.48 Aligned_cols=308 Identities=18% Similarity=0.182 Sum_probs=181.3
Q ss_pred CCHHHHHHHHHHHHHccccCC----CCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCc
Q 012138 92 CHPKIMKALQEQAEKLTLSSR----AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEA 167 (470)
Q Consensus 92 ~~p~v~~a~~~~~~~~~~~~~----~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~ 167 (470)
-++++.+++.+.++.+..... ....+....+++.+++++|.+.+++++||+.|+..++..+ . +|+
T Consensus 93 l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~gae~alvv~sg~aAi~l~l~~l-~---------~Gd- 161 (454)
T TIGR00474 93 LAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTGAEDALVVNNNAAAVLLALNTL-A---------KGK- 161 (454)
T ss_pred CCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHh-C---------CcC-
Confidence 468999999998886541100 1122346789999999999988889999999998888543 2 466
Q ss_pred EEEEEccC---cccccc--chhcccCCcccccCCCCCCCCeeeecC---CCHHHHHHHHHhcCCCeEEEEEccccCC--C
Q 012138 168 IIVSCCGC---FHGRTL--AAISMSCDNEAIRGFGPLLPGHLKVDF---GDITALEKIFKESGDQIAGFLFEPIQGE--A 237 (470)
Q Consensus 168 ~ii~~~~~---yhg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~~Le~~l~~~~~~~~~vi~epi~n~--~ 237 (470)
.||+.+.. |.|... ..+...+. ....+++ .+++++++++++ +|++|+++...|+ .
T Consensus 162 eVIvs~~e~v~~ggs~~i~~~~~~~G~------------~~~~v~~~~~~~l~dle~aI~~---~T~lv~~~h~sN~~~~ 226 (454)
T TIGR00474 162 EVIVSRGELVEIGGSFRIPDVMEQSGA------------KLVEVGTTNRTHLKDYEDAITE---NTALLLKVHTSNYRIV 226 (454)
T ss_pred EEEECCChhhhhcchhhHHHHHHHcCC------------EEEEeCCCCCCCHHHHHHhcCc---CCEEEEEEccCccccc
Confidence 55554444 222111 11111111 1223333 368899998876 7999888777776 3
Q ss_pred c--cccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCC------ccccccCCCCcceeecc--ccccCCCcceeEEEe
Q 012138 238 G--VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR------MLASDWEEVRPDMVILG--KALGGGVIPVSAVLA 307 (470)
Q Consensus 238 G--~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~------~~~~~~~~~~pdi~s~s--K~l~gG~~~ig~v~~ 307 (470)
| .+.| +++|.++|++||+++|+|....-++..+. ....+......|+++|| |.++|. ..|++++
T Consensus 227 G~~~~~d----l~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp--~~G~i~g 300 (454)
T TIGR00474 227 GFTEEVS----IAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGP--QAGIIVG 300 (454)
T ss_pred CCCCCCC----HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCC--eEEEEEE
Confidence 6 4677 99999999999999999975322222111 11112222346899888 988764 4788889
Q ss_pred cHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhhh--hH------------HHHHHHHHHHHHHHHHHHHhhCCCc-e
Q 012138 308 DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE--KL------------AERSAHLGEELRQHLFKIQQQFPNY-V 372 (470)
Q Consensus 308 ~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~--~~------------~~~~~~~~~~l~~~L~~l~~~~p~~-~ 372 (470)
++++++.++.......+...-+..++..+++....++ .+ .++.++++..+.+.|+.... ++. +
T Consensus 301 ~~~~i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~--~~~~~ 378 (454)
T TIGR00474 301 KKELIERLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALG--PGFEL 378 (454)
T ss_pred CHHHHHhhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhcc--CCceE
Confidence 9998887764322222223333444444555443221 01 12444456666666655311 001 1
Q ss_pred EEEec-----cce-------eEEEEeccCCCchhHHHHHHHHHHcC--ceeccCCCCEEEEecCCCCCHHHHHHHHHHH
Q 012138 373 KEVRG-----RGL-------FNAVEFDKTALPVSAYDICLKMKERG--ILAKPTHDTIVRLTPPLSISSNELQEGSKAL 437 (470)
Q Consensus 373 ~~~~~-----~g~-------~~~~~~~~~~~~~~~~~~~~~l~~~G--v~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l 437 (470)
..+.. .|. -+.+.+... +.++.++.++|++.. |+.. ...+.+.+-+ .+..++|++.++++|
T Consensus 379 ~~~~~~~~~ggg~~p~~~l~~~~v~~~~~--~~~~~~l~~~lr~~~~~ii~r-~~~~~~~ld~-r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 379 EIVPGLSQVGGGSLPDERLPSYAVTLTPD--GLSAEKLEARLRELPPPIIGR-IEDDRFLLDL-RTLLEDEEELLIEAL 453 (454)
T ss_pred EEEEcCCcccCCCCcCCCCCeEEEEEecC--CCCHHHHHHHHhcCCCCEEEE-EECCEEEEEe-CcCCHHHHHHHHHHh
Confidence 11111 121 122333322 246788999998774 4443 3466667764 356788888888776
No 336
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.65 E-value=2.8e-13 Score=124.01 Aligned_cols=334 Identities=19% Similarity=0.193 Sum_probs=217.6
Q ss_pred EeCCCCeEEeccCCcccccCCCCCHHHHHHHHH-HHHHcccc---CC----CCCCCcHHHHHHHHhhhhC--CCeEEecC
Q 012138 70 WDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQE-QAEKLTLS---SR----AFYNDKFPVFAERLTSMFG--YDMVLPMN 139 (470)
Q Consensus 70 ~d~~G~~~lD~~~~~~~~~lG~~~p~v~~a~~~-~~~~~~~~---~~----~~~~~~~~~l~~~l~~~~~--~~~v~~~~ 139 (470)
.+.+|-.|||- ++||-.++.+.+...+ ..+..... ++ ....++-+.+..+|+.+.| ..+|+.++
T Consensus 27 ~lp~~viyLdg------nSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~Evvv~d 100 (407)
T COG3844 27 ALPGGVIYLDG------NSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGARAGEVVVTD 100 (407)
T ss_pred cCCCCeEEeec------cccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhcCCCCceEEeC
Confidence 34556667663 4567555455544433 33332211 11 1123344566777777776 45788888
Q ss_pred ChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHH
Q 012138 140 TGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFK 219 (470)
Q Consensus 140 sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~ 219 (470)
|-+--+...+.++.+. .+|+.+|++...+|......+..+..-. ...+. - ...+ .+++++++++
T Consensus 101 tts~nl~k~L~aalr~-------~~~r~vIv~E~~~fpTdly~a~g~~~~~--~~~~~---~-~~~~---~P~~~~~~~~ 164 (407)
T COG3844 101 TTSINLFKVLAAALRP-------QEGRRVIVSEGDNFPTDLYIAEGLADLL--GIGYD---L-EGVI---APRALEEAIT 164 (407)
T ss_pred CcchHHHHHHHHHhcc-------CCCceEEeecCCCCCcchhhhcchhhhh--ccccc---c-eeee---ChHHHHHhhc
Confidence 8776666666666542 1467777777777754433322211100 00000 0 0111 6889999998
Q ss_pred hcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCc-cccccCCCCcceeeccccccCC
Q 012138 220 ESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDWEEVRPDMVILGKALGGG 298 (470)
Q Consensus 220 ~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~-~~~~~~~~~pdi~s~sK~l~gG 298 (470)
+ +++.|++..++--||...+ +.+|..++++||++++.|=+|+ .|.. ......|.+.-+.|.-|-+.||
T Consensus 165 d---d~AvV~L~~V~y~TGql~d----m~aiT~~AH~~galv~wDLAHs----aGavp~~Lh~~gaDfaigcsyKYLNgG 233 (407)
T COG3844 165 D---DVAVVLLSHVNYKTGQLLD----MRAITALAHQHGALVGWDLAHS----AGAVPVDLHAAGADFAIGCSYKYLNGG 233 (407)
T ss_pred c---ceEEEEeccccccccceee----HHHHHHHHHhcCceEEeehhcc----cCCcceeecccCCCeeeeeeceeccCC
Confidence 7 8999999999999999998 9999999999999999999998 2221 1123345554566777988866
Q ss_pred CcceeEEEecHHHHhhcCcC--------------------CccCCC---CCCHHHHHHHHHHHHHHhh---hhHHHHHHH
Q 012138 299 VIPVSAVLADKEVMLCIQPG--------------------EHGSTF---GGNPLASAVAIASLDVIRD---EKLAERSAH 352 (470)
Q Consensus 299 ~~~ig~v~~~~~~~~~~~~~--------------------~~~~t~---~~~~~~~aaa~a~l~~~~~---~~~~~~~~~ 352 (470)
-...+++.+.++..+...+. .+...| +.+.+++++...+|++..+ .+++++...
T Consensus 234 PGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSla 313 (407)
T COG3844 234 PGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLA 313 (407)
T ss_pred CCCceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhH
Confidence 54566666666555443221 111112 2466678888888988766 567788888
Q ss_pred HHHHHHHHHHHHHhhCCCceEEE-----eccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEec-CCCCC
Q 012138 353 LGEELRQHLFKIQQQFPNYVKEV-----RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTP-PLSIS 426 (470)
Q Consensus 353 ~~~~l~~~L~~l~~~~p~~~~~~-----~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~-~~~~t 426 (470)
+.+++.+.++.....++ +..+ ..+|..+.+..+ ....+++.|.++||+..-..++.+||.| |+..+
T Consensus 314 LTd~fieLvEa~~~~~~--l~l~tPr~~~~rGsqvS~~hp------~~~~V~qaLi~rGVigD~R~P~vlRfgftPlY~~ 385 (407)
T COG3844 314 LTDYFIELVEARCEYYG--LTLVTPRAHEERGSQVSLYHP------HGYQVMQALIDRGVIGDFREPDVLRFGFTPLYVS 385 (407)
T ss_pred HHHHHHHHHHhccccCC--cEEeccchhhhccceeeEecC------cHHHHHHHHHHcCccccccCCCeeeecCccceec
Confidence 88888888877655443 2222 234666666443 5788999999999998766789999988 78999
Q ss_pred HHHHHHHHHHHHHHHhccc
Q 012138 427 SNELQEGSKALHDVLELDL 445 (470)
Q Consensus 427 ~e~i~~~~~~l~~~l~~~~ 445 (470)
.+|+-.+++.|.++++ ..
T Consensus 386 ~~DVw~AV~~L~evL~-t~ 403 (407)
T COG3844 386 FVDVWDAVDALEEVLD-TL 403 (407)
T ss_pred hhHHHHHHHHHHHHHH-hh
Confidence 9999999999999998 54
No 337
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.64 E-value=3.5e-13 Score=143.57 Aligned_cols=307 Identities=16% Similarity=0.199 Sum_probs=195.7
Q ss_pred cHHHHHHHHhhhhCCCeE-EecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCC
Q 012138 118 KFPVFAERLTSMFGYDMV-LPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGF 196 (470)
Q Consensus 118 ~~~~l~~~l~~~~~~~~v-~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 196 (470)
...++.++|++++|++.+ +..++|+.|..+++.+++.|. ..+|. .++.+|++. .+-||....+....+-... .
T Consensus 531 ~i~elq~~l~eltGmd~~Sl~p~aGA~gE~agL~aiR~y~-~~rge-~~R~~vlip-~saHgtnPasa~~~G~~Vv---~ 604 (939)
T TIGR00461 531 LIAQLEKWLCSITGFDAISLQPNSGAQGEYAGLRVIRSYH-ESRGE-NHRNICLIP-VSAHGTNPASAAMAGMQVV---P 604 (939)
T ss_pred HHHHHHHHHHHHHCCCCcccCCchHHHHHHHHHHHHHHHH-HhcCC-CCCCEEEEE-ccccCcCHHHHHHCCCEEE---E
Confidence 356789999999999864 566778888877888887642 33331 134344444 4458877655444332111 1
Q ss_pred CCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccC-CcccCC
Q 012138 197 GPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG-LARSGR 275 (470)
Q Consensus 197 ~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g-~g~~G~ 275 (470)
.+... ...+ |+++|+++++++++++++|++...++ .|.+.++ +++|.++|+++|.++++|-+|.. +...-
T Consensus 605 V~~d~-~G~i---Dle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~---I~eI~~iah~~G~~v~VDgAq~~al~~l~- 675 (939)
T TIGR00461 605 VNCDQ-DGNI---DLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPT---IQHACDIVHSFGGQVYLDGANMNAQVGLT- 675 (939)
T ss_pred eccCC-CCCc---CHHHHHHHHhhcCCceEEEEEEeCCc-Cceeccc---HHHHHHHHHHcCCEEEEEecChhhCCCCC-
Confidence 11110 1122 89999999987666899999877566 6766433 89999999999999999999962 32110
Q ss_pred ccccccCCCCcceeecc--cccc-----CCCcceeEEEecHHHHhhcCcCC----------------ccCCCCCCHHHHH
Q 012138 276 MLASDWEEVRPDMVILG--KALG-----GGVIPVSAVLADKEVMLCIQPGE----------------HGSTFGGNPLASA 332 (470)
Q Consensus 276 ~~~~~~~~~~pdi~s~s--K~l~-----gG~~~ig~v~~~~~~~~~~~~~~----------------~~~t~~~~~~~~a 332 (470)
... ....|++.++ |+|+ ||. .+|.+.+++++...+.... ..+.+.++.....
T Consensus 676 --~Pg--~~GaDi~~~s~HKtf~~P~G~GGP-g~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l 750 (939)
T TIGR00461 676 --SPG--DLGADVCHLNLHKTFCIPHGGGGP-GMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILP 750 (939)
T ss_pred --Ccc--ccCCCEEEecCCccCCCCCCCCCC-CeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcHHHHH
Confidence 011 2235888775 9887 676 8899999887665443111 1112335555556
Q ss_pred HHHHHHHHHhhhhHH---HHHHHHHHHHHHHHHHHHhhCCCceEEEec-cce-e--EEEEecc--CCCchhHHHHHHHHH
Q 012138 333 VAIASLDVIRDEKLA---ERSAHLGEELRQHLFKIQQQFPNYVKEVRG-RGL-F--NAVEFDK--TALPVSAYDICLKMK 403 (470)
Q Consensus 333 aa~a~l~~~~~~~~~---~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~-~g~-~--~~~~~~~--~~~~~~~~~~~~~l~ 403 (470)
.++..+..+..+.+. +..-.+++++.++|.+. ++ .+. .+ .+. + +.+.+.. ...+....++.++|.
T Consensus 751 ~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~---~~-~l~--~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~ 824 (939)
T TIGR00461 751 ISWMYIKMMGNEGLPKASVVAILNANYMATRLKDH---YP-ILF--VGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQ 824 (939)
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcc---Cc-ccc--cCCCCceeEEEEEeccchhhhcCCCHHHHHHHHH
Confidence 677777777765544 44555788888888762 21 121 11 111 1 2222221 011346889999999
Q ss_pred HcCceeccC---CCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccCCCCCC
Q 012138 404 ERGILAKPT---HDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRKP 451 (470)
Q Consensus 404 ~~Gv~~~~~---~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~~~~~ 451 (470)
+.|+..... -.+.+-+.|.-..|++|||++++++.++-+ +++++.+.
T Consensus 825 d~G~hapt~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~-e~~~~~~g 874 (939)
T TIGR00461 825 DYGFHAPTLSFPVPGTLMVEPTESESLEELDRFCDAMIAIKE-EINALVAG 874 (939)
T ss_pred hCCeeccccCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHH-HHHHhhcC
Confidence 999985321 124788888899999999999999999888 87775443
No 338
>PLN02880 tyrosine decarboxylase
Probab=99.62 E-value=8.2e-14 Score=142.13 Aligned_cols=316 Identities=13% Similarity=0.047 Sum_probs=186.4
Q ss_pred CCcHHHHHHHHhhhhCCCe---------EEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcc
Q 012138 116 NDKFPVFAERLTSMFGYDM---------VLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISM 186 (470)
Q Consensus 116 ~~~~~~l~~~l~~~~~~~~---------v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~ 186 (470)
.....++.+|+++++|.+. -++|+|||+||..|+.++|.+.....+.......++..+..-|.+...+..+
T Consensus 121 ~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~ 200 (490)
T PLN02880 121 TELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQI 200 (490)
T ss_pred HHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHH
Confidence 3445667788888887653 5789999999999999999754332221111224454454448777666555
Q ss_pred cCCcccccCCCCCCC-CeeeecCCCHHHHHHHHHhc---CCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEE
Q 012138 187 SCDNEAIRGFGPLLP-GHLKVDFGDITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMI 262 (470)
Q Consensus 187 ~~~~~~~~~~~~~~~-~~~~~~~~d~~~Le~~l~~~---~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI 262 (470)
-+-........|... +...+ |+++|+++|++. +..+.+|+.+--...+|.+.| +++|.++|++||++++
T Consensus 201 lGlg~~~v~~Vp~d~~~~~~m---d~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp----l~eI~~i~~~~~iwlH 273 (490)
T PLN02880 201 AGIHPENCRLLKTDSSTNYAL---APELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP----LLELGKIAKSNGMWFH 273 (490)
T ss_pred cCCCHHHEEEeecCCCcCCcC---CHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc----HHHHHHHHHHcCCEEE
Confidence 543211000011111 01223 899999999752 233556666665678999999 9999999999999999
Q ss_pred EeccccCCcccCCccccccCCC-Ccceeec--cccccCCCcceeEEEecHH--HHhhcCcC----Cc-----cCC-----
Q 012138 263 ADEIQSGLARSGRMLASDWEEV-RPDMVIL--GKALGGGVIPVSAVLADKE--VMLCIQPG----EH-----GST----- 323 (470)
Q Consensus 263 ~Dev~~g~g~~G~~~~~~~~~~-~pdi~s~--sK~l~gG~~~ig~v~~~~~--~~~~~~~~----~~-----~~t----- 323 (470)
+|.+|+|+...-..+.....++ ..|.+++ -|.+...+ +.|+++.+.. +.+.+... .. ..+
T Consensus 274 VDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~-~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~ 352 (490)
T PLN02880 274 VDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNF-DCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKD 352 (490)
T ss_pred EehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCc-cEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhc
Confidence 9999986432211111112343 3566644 48888777 8899887642 22222110 00 000
Q ss_pred CC---CCHHHHHHHHHHHHHHhhhhHHHHHH---HHHHHHHHHHHHHHhhCCCceEEE-eccceeEEEEeccCCC-----
Q 012138 324 FG---GNPLASAVAIASLDVIRDEKLAERSA---HLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTAL----- 391 (470)
Q Consensus 324 ~~---~~~~~~aaa~a~l~~~~~~~~~~~~~---~~~~~l~~~L~~l~~~~p~~~~~~-~~~g~~~~~~~~~~~~----- 391 (470)
++ +........+.+|+.+..+.+.++++ ++++++.+.|++. | .+..+ ++.-.++.+.+.....
T Consensus 353 ~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~----~-~~el~~~~~~~iv~Fr~~~~~~~~~~~ 427 (490)
T PLN02880 353 WQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQD----S-RFEVVTPRIFSLVCFRLVPPKNNEDNG 427 (490)
T ss_pred cCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcC----C-CEEEecCCceEEEEEEEeCCCCChhhH
Confidence 11 11112334445566666677777777 7777777766542 2 22222 2344456665543210
Q ss_pred chhHHHHHHHHHHcCce-ecc---CCCCEEEEecCCC-CCHHHHHHHHHHHHHHHhccc
Q 012138 392 PVSAYDICLKMKERGIL-AKP---THDTIVRLTPPLS-ISSNELQEGSKALHDVLELDL 445 (470)
Q Consensus 392 ~~~~~~~~~~l~~~Gv~-~~~---~~~~~iR~~~~~~-~t~e~i~~~~~~l~~~l~~~~ 445 (470)
.....++.++|.+.|-+ +.+ .+..++|+++... +++++++.+++.|.+..+ ++
T Consensus 428 ~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~-~~ 485 (490)
T PLN02880 428 NKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEAS-KL 485 (490)
T ss_pred HHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH-HH
Confidence 01123566677766543 332 2467899987544 457999999999999887 65
No 339
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.61 E-value=4.9e-13 Score=131.99 Aligned_cols=339 Identities=16% Similarity=0.152 Sum_probs=191.2
Q ss_pred CCeEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHH
Q 012138 74 GNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLAR 153 (470)
Q Consensus 74 G~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~ 153 (470)
..-|||+.+-.+. +.+.++....+....-.+ .-.+...+|++.+++++|.+.+++++||+.|++.+..+..
T Consensus 44 ~~v~IDLlSDS~T-------~aMs~~q~a~~~vGDd~Y--agd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v 114 (460)
T PRK13237 44 EDVYIDLLTDSGT-------NAMSDRQWAGMMIGDEAY--AGSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAI 114 (460)
T ss_pred CcEEEECcccCCc-------hhccHHHHHHHhhcchhh--cCCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCC
Confidence 3467898877543 223344333332211111 1244578999999999999999999999999998644322
Q ss_pred HhchhcccCCCCCcEEEEEccCccccccch-hcccCCcccccC-----CCC--CCCCeeeecCCCHHHHHHHHHhcC-CC
Q 012138 154 KWGYVKKKFSIDEAIIVSCCGCFHGRTLAA-ISMSCDNEAIRG-----FGP--LLPGHLKVDFGDITALEKIFKESG-DQ 224 (470)
Q Consensus 154 ~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~-~~~~~~~~~~~~-----~~~--~~~~~~~~~~~d~~~Le~~l~~~~-~~ 224 (470)
+ +|+ .| .+.+|-.+..+ +...+. .+... +.+ ..+....+ |++.|+++|++.+ .+
T Consensus 115 ~---------pGd-~V---p~n~~f~Tt~ahI~~~Ga-~fvDi~~d~a~~~~~~~p~tgnl---D~d~Le~~I~~~~~~~ 177 (460)
T PRK13237 115 K---------PGQ-YV---PGNMYFTTTRYHQELNGG-IFVDIIIDEAHDAQSDHPFKGNV---DLDKLQALIDEVGAEN 177 (460)
T ss_pred C---------CcC-EE---CCccchHhhHHHHHhCCc-EEEeeecccccccccCCCCCCCc---CHHHHHHHhccccCCc
Confidence 2 465 33 23323222222 222221 01000 000 00111222 8999999998643 34
Q ss_pred eEEEE-EccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-C---Cc------ccCCccc---cccCCCCcceee
Q 012138 225 IAGFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G---LA------RSGRMLA---SDWEEVRPDMVI 290 (470)
Q Consensus 225 ~~~vi-~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g---~g------~~G~~~~---~~~~~~~pdi~s 290 (470)
++.+. +.++|.-+|..+ +.+.++++.++|++||+.||.|.++. | |- +.|+... .+... -.|.++
T Consensus 178 ~~lV~a~itvn~~GGqpv-s~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s-~aD~~t 255 (460)
T PRK13237 178 IAYICLAVTVNLAGGQPV-SMANMRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFS-YADGCT 255 (460)
T ss_pred cCceEEEEecccCCCeeC-CHHhHHHHHHHHHHcCCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccC-cCcEEE
Confidence 44444 444344457877 78889999999999999999999998 3 21 1221110 01111 237665
Q ss_pred cc--ccccCCCcceeEEE-ecHHHHhhcCcC----CccCCCCCCHH-HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 012138 291 LG--KALGGGVIPVSAVL-ADKEVMLCIQPG----EHGSTFGGNPL-ASAVAIASLDVIRDEKLAERSAHLGEELRQHLF 362 (470)
Q Consensus 291 ~s--K~l~gG~~~ig~v~-~~~~~~~~~~~~----~~~~t~~~~~~-~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~ 362 (470)
|| |.++.+. -|+++ .++++.+.++.. ....|+++-.- -+.+....|+...++++.++.-...++|.+.|.
T Consensus 256 ~S~~K~~~~~~--GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~~~~~y~~~ri~~~~~l~~~L~ 333 (460)
T PRK13237 256 MSGKKDCLVNI--GGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQYEYIEHRVGQVRYLGEKLL 333 (460)
T ss_pred EeCCCCCCCCC--ceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHHHHhHHHhhchHHHHHHHHHHHHHHHHHHH
Confidence 55 6555321 13344 577888777643 23335544211 233333334444444566666667788888887
Q ss_pred HHHhhCCCceEEEeccceeEEEEeccCC-------CchhHHHHHHHHHHc-Cceec----------cC-C------CCEE
Q 012138 363 KIQQQFPNYVKEVRGRGLFNAVEFDKTA-------LPVSAYDICLKMKER-GILAK----------PT-H------DTIV 417 (470)
Q Consensus 363 ~l~~~~p~~~~~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~l~~~-Gv~~~----------~~-~------~~~i 417 (470)
+. .+..+.+.|....+ ++... ....++.++.+|... ||-.. |. + -..+
T Consensus 334 ~~------Gvpv~~p~ggH~v~-vda~~~lph~~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~ 406 (460)
T PRK13237 334 AA------GVPIVEPVGGHAVF-LDARRFLPHLPQDQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELV 406 (460)
T ss_pred HC------CCceecCCCceEEE-EEhHHhCCCCCcccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCcccee
Confidence 73 34444445443333 32211 023577788777655 76432 10 0 2679
Q ss_pred EEecCC-CCCHHHHHHHHHHHHHHHhcccCCCCC
Q 012138 418 RLTPPL-SISSNELQEGSKALHDVLELDLPKMRK 450 (470)
Q Consensus 418 R~~~~~-~~t~e~i~~~~~~l~~~l~~~~~~~~~ 450 (470)
|+++|. +.|.++++..+++|..+.+ +...+.-
T Consensus 407 rlaiprr~yt~~h~~~v~~~~~~~~~-~~~~~~g 439 (460)
T PRK13237 407 RLTIPRRVYTYAHMDVVADSVIKLYK-HREDIRG 439 (460)
T ss_pred eeccccccccHHHHHHHHHHHHHHHH-hHhhcCC
Confidence 998764 5699999999999999988 6555544
No 340
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.60 E-value=1.3e-13 Score=134.04 Aligned_cols=289 Identities=19% Similarity=0.190 Sum_probs=179.4
Q ss_pred CCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccc
Q 012138 114 FYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAI 193 (470)
Q Consensus 114 ~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 193 (470)
..++.+..|++.++++.|.+..+.++||..|+..++..+.+ +|+ .|+..+..|.|.......+-..
T Consensus 60 ~~nPT~~~lE~~~a~LEg~~~~~afsSGmaAI~~~~l~ll~---------~GD-~vl~~~~~YG~t~~~~~~~l~~---- 125 (396)
T COG0626 60 TGNPTRDALEEALAELEGGEDAFAFSSGMAAISTALLALLK---------AGD-HVLLPDDLYGGTYRLFEKILQK---- 125 (396)
T ss_pred CCCccHHHHHHHHHHhhCCCcEEEecCcHHHHHHHHHHhcC---------CCC-EEEecCCccchHHHHHHHHHHh----
Confidence 45788999999999999999999999999999998887765 466 6666666775433222111111
Q ss_pred cCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCccc
Q 012138 194 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS 273 (470)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~ 273 (470)
+.-++..+...+.+++++++.+ +++++|++|++.||+-.+.+ +++|.++|+++|+++|+|+++..
T Consensus 126 -----~gi~~~~~d~~~~~~~~~~~~~--~~tk~v~lEtPsNP~l~v~D----I~~i~~~A~~~g~~vvVDNTfat---- 190 (396)
T COG0626 126 -----FGVEVTFVDPGDDEALEAAIKE--PNTKLVFLETPSNPLLEVPD----IPAIARLAKAYGALVVVDNTFAT---- 190 (396)
T ss_pred -----cCeEEEEECCCChHHHHHHhcc--cCceEEEEeCCCCccccccc----HHHHHHHHHhcCCEEEEECCccc----
Confidence 0011233433355566666653 37999999999999999998 99999999999999999999873
Q ss_pred CCccccccCCCCccee--eccccccCCC-cceeEEEe-cHHHHhhcCcCCc-cCCCCCCHHHHHHHHHHHHHHhhhhHHH
Q 012138 274 GRMLASDWEEVRPDMV--ILGKALGGGV-IPVSAVLA-DKEVMLCIQPGEH-GSTFGGNPLASAVAIASLDVIRDEKLAE 348 (470)
Q Consensus 274 G~~~~~~~~~~~pdi~--s~sK~l~gG~-~~ig~v~~-~~~~~~~~~~~~~-~~t~~~~~~~~aaa~a~l~~~~~~~~~~ 348 (470)
+-. +..+..-.|++ +.+|-++|.- .=.|.+++ ++++.+.+..... ......+|..+...+..|+.+.- ..+
T Consensus 191 P~~--q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlkTL~~--Rm~ 266 (396)
T COG0626 191 PVL--QRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWLLLRGLRTLAL--RME 266 (396)
T ss_pred ccc--cChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCCCCCHHHHHHHHhccchHHH--HHH
Confidence 111 22233334766 7789998632 13344554 4455554421111 12233677777766665554432 334
Q ss_pred HHHHHHHHHHHHHHHHHh----hCCCc---------eEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceec-----
Q 012138 349 RSAHLGEELRQHLFKIQQ----QFPNY---------VKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK----- 410 (470)
Q Consensus 349 ~~~~~~~~l~~~L~~l~~----~~p~~---------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----- 410 (470)
+..+++..+.+.|++... .||.. .....+.|.++.+++.... ...+|.+.|+--.+..+
T Consensus 267 ~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~---~~~~f~~~L~l~~~a~SlGgve 343 (396)
T COG0626 267 RHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEE---AAKKFLDSLKLFKLAESLGGVE 343 (396)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChH---HHHHHHHhCCccEEeccCCCcc
Confidence 444455555555555211 11210 0011247889999887522 56666666543222211
Q ss_pred -----cC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 411 -----PT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 411 -----~~-----------------~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
|. .++.+|+++.+ |+++.+++-|+++++
T Consensus 344 SLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGl----Ed~eDLi~Dl~~Al~ 393 (396)
T COG0626 344 SLISHPATMTHASIPLEERAKAGITDGLVRLSVGL----EDVEDLIADLEQALA 393 (396)
T ss_pred cccccccccCcccCCHhHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHH
Confidence 10 16889999554 677777777777776
No 341
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.60 E-value=1.1e-14 Score=139.87 Aligned_cols=225 Identities=12% Similarity=0.064 Sum_probs=137.3
Q ss_pred CCCcHHHHHHHHhhhhCCCeEEe-cCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccc
Q 012138 115 YNDKFPVFAERLTSMFGYDMVLP-MNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAI 193 (470)
Q Consensus 115 ~~~~~~~l~~~l~~~~~~~~v~~-~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 193 (470)
+.....++++.+++++|.+++++ ++|+++++..++..+.. +|+ .|++..++ |.+...++.+.+....
T Consensus 57 ~~g~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al~~---------~gd-~Vlv~~~~-h~s~~~~~~~~g~~~~- 124 (294)
T cd00615 57 PTGPIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAVCG---------PGD-KILIDRNC-HKSVINGLVLSGAVPV- 124 (294)
T ss_pred CChHHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHcCC---------CCC-EEEEeCCc-hHHHHHHHHHCCCEEE-
Confidence 45557888999999999887665 88889999998886654 455 77777777 4444444444332111
Q ss_pred cCCCCCCCC-eeee-cCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccC-C
Q 012138 194 RGFGPLLPG-HLKV-DFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG-L 270 (470)
Q Consensus 194 ~~~~~~~~~-~~~~-~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g-~ 270 (470)
+.+...+ ...+ ..-|+++++++++++ .++++|++.. .|++|.+.| +++|.++|++||+++|+||+|.. +
T Consensus 125 --~v~~~~~~~~~~~~~i~~~~l~~~l~~~-~~~k~v~l~~-p~~~G~~~d----l~~I~~~~~~~g~~livDeA~~~~~ 196 (294)
T cd00615 125 --YLKPERNPYYGIAGGIPPETFKKALIEH-PDAKAAVITN-PTYYGICYN----LRKIVEEAHHRGLPVLVDEAHGAHF 196 (294)
T ss_pred --EecCccCcccCcCCCCCHHHHHHHHHhC-CCceEEEEEC-CCCCCEecC----HHHHHHHHHhcCCeEEEECcchhhh
Confidence 1111000 0000 012899999999753 2577777554 368999998 99999999999999999999984 3
Q ss_pred cccCCccccccCCCCccee--eccccccCCCcceeE-EEecHHHH--hhcC-cCCccCCCCCCHHHHHHHHHHHHHHhh-
Q 012138 271 ARSGRMLASDWEEVRPDMV--ILGKALGGGVIPVSA-VLADKEVM--LCIQ-PGEHGSTFGGNPLASAVAIASLDVIRD- 343 (470)
Q Consensus 271 g~~G~~~~~~~~~~~pdi~--s~sK~l~gG~~~ig~-v~~~~~~~--~~~~-~~~~~~t~~~~~~~~aaa~a~l~~~~~- 343 (470)
...+... ........|++ +++|+++ |+ +.|+ +..+.+.. +.+. ......+.+++.+.+++..++++.+..
T Consensus 197 ~~~~~~~-~~~~~~~~div~~S~hK~l~-g~-~~~~~l~~~~~~~~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~~~ 273 (294)
T cd00615 197 RFHPILP-SSAAMAGADIVVQSTHKTLP-AL-TQGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARAMMALE 273 (294)
T ss_pred ccCcccC-cchhhcCCcEEEEchhcccc-hH-hHHHHHHhCCCcCCHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHH
Confidence 2222211 11111233655 7779875 33 4433 33433211 1111 111223445677777887788877653
Q ss_pred -hhHHHHHHHHHHHHHHHHH
Q 012138 344 -EKLAERSAHLGEELRQHLF 362 (470)
Q Consensus 344 -~~~~~~~~~~~~~l~~~L~ 362 (470)
.++.++..++.+++++.|+
T Consensus 274 g~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 274 GKELVEELIELALYARQEIN 293 (294)
T ss_pred hHHHHHHHHHHHHHHHHHHh
Confidence 4466677777777776654
No 342
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.59 E-value=5.6e-13 Score=131.24 Aligned_cols=341 Identities=15% Similarity=0.180 Sum_probs=193.5
Q ss_pred CCeEEeccCCcccccCCCCCHHHHHH-HHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHH
Q 012138 74 GNKYLDFLSAYSAVNQGHCHPKIMKA-LQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLA 152 (470)
Q Consensus 74 G~~~lD~~~~~~~~~lG~~~p~v~~a-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~ 152 (470)
..-|||+.+-.+. +.+.++ +......-. .+ .-.+...+|++.+++++|.+.+++++||+.|++.+..+.
T Consensus 37 ~~v~iDLltDsgT-------~aMs~~q~a~~~~GDe-~y--ag~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~ 106 (450)
T TIGR02618 37 EDVYIDLLTDSGT-------NAMSDKQWAGLMMGDE-AY--AGSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIA 106 (450)
T ss_pred CceEEEcccCCCc-------HHHHHHHHHHhhhcch-hh--cCCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhC
Confidence 3467898876433 345554 333321111 11 124557899999999999999999999999988654322
Q ss_pred HHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccC-----CCCC--CCCeeeecCCCHHHHHHHHHhcC-CC
Q 012138 153 RKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRG-----FGPL--LPGHLKVDFGDITALEKIFKESG-DQ 224 (470)
Q Consensus 153 ~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~d~~~Le~~l~~~~-~~ 224 (470)
.+ +|+ .| ..+.|-..+...+...+. .+... +.+. .+....+ |+++|+++|++.+ .+
T Consensus 107 l~---------pGD-eV--psn~~f~Tt~ahIe~~Ga-v~vDi~~dea~~~~~~~p~~Gni---D~~~Le~aI~~~~~~~ 170 (450)
T TIGR02618 107 IK---------PGD-YV--PGNMYFTTTRYHQEKNGA-TFVDIIIDEAHDAQLNIPFKGNV---DLKKLQKLIDEVGADK 170 (450)
T ss_pred CC---------CcC-EE--CCceeHHHHHHHHHhCCe-EEEeeecccccccccCCCCCCCc---CHHHHHHHhccccCcc
Confidence 22 566 44 333331222221222221 11000 0000 0111222 8999999998642 24
Q ss_pred eEEEE-EccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-C---C------cccCCcc---ccccCCCCcceee
Q 012138 225 IAGFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G---L------ARSGRML---ASDWEEVRPDMVI 290 (470)
Q Consensus 225 ~~~vi-~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g---~------g~~G~~~---~~~~~~~~pdi~s 290 (470)
+++|. +.++|..+|..+ +.+.++++.++|++||+.||.|.++. | | |+.+... .-+.+. ..|.++
T Consensus 171 ~~lV~~e~t~N~~GG~pv-s~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~-~aD~~~ 248 (450)
T TIGR02618 171 IPYICLAVTVNLAGGQPV-SMANMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMS-YADGCT 248 (450)
T ss_pred cCceEEEEecccCCCeeC-CHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhc-cCcEEE
Confidence 55555 444444678888 88889999999999999999999987 1 1 1111110 000011 125544
Q ss_pred cccccc-CCCcceeEEEe--cHHHHhhcCcC----CccCCCCC-CHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 012138 291 LGKALG-GGVIPVSAVLA--DKEVMLCIQPG----EHGSTFGG-NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLF 362 (470)
Q Consensus 291 ~sK~l~-gG~~~ig~v~~--~~~~~~~~~~~----~~~~t~~~-~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~ 362 (470)
+| +.- ++. ++|.+++ +++++++.+.. ....++++ ..-.+.+...+|+..-+....++.....++|.+.|.
T Consensus 249 ~S-~~Kd~~~-~~GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~~~y~~~r~~~a~~La~~L~ 326 (450)
T TIGR02618 249 MS-GKKDCLV-NIGGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVDYEYIEHRVKQVRYLGDKLK 326 (450)
T ss_pred Ee-eccCCCC-CCceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 43 332 333 6565554 78888776543 11223333 222334444456555455566677777888888888
Q ss_pred HHHhhCCCceEEEeccceeEEEEecc--CCC---chhHHHHHHHHHHc-Cceec----------cC-----C--CCEEEE
Q 012138 363 KIQQQFPNYVKEVRGRGLFNAVEFDK--TAL---PVSAYDICLKMKER-GILAK----------PT-----H--DTIVRL 419 (470)
Q Consensus 363 ~l~~~~p~~~~~~~~~g~~~~~~~~~--~~~---~~~~~~~~~~l~~~-Gv~~~----------~~-----~--~~~iR~ 419 (470)
+.+ .| .+ .+..|..+.+.... +.. ...++.++-+|... ||-.. |. . -..+|+
T Consensus 327 ~~G--vp-v~--~p~ggh~V~vda~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rl 401 (450)
T TIGR02618 327 AAG--VP-IV--EPVGGHAVFLDARRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRL 401 (450)
T ss_pred HCC--Cc-cc--CCCCcceEEEEhHHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeee
Confidence 862 22 21 23455555554432 111 23567777777655 76422 10 0 257999
Q ss_pred ecCC-CCCHHHHHHHHHHHHHHHhcccCCCCC
Q 012138 420 TPPL-SISSNELQEGSKALHDVLELDLPKMRK 450 (470)
Q Consensus 420 ~~~~-~~t~e~i~~~~~~l~~~l~~~~~~~~~ 450 (470)
++|. +.|.++++..+++|..+.+ +...+.-
T Consensus 402 aiprr~yt~~h~~~v~~~~~~~~~-~~~~~~g 432 (450)
T TIGR02618 402 TIPRRVYTYAHMDVVADGIIKLYK-HRDDIRG 432 (450)
T ss_pred ccccccccHhHHHHHHHHHHHHHh-hHhhcCc
Confidence 8764 5699999999999999998 6655544
No 343
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.59 E-value=6.3e-14 Score=134.53 Aligned_cols=195 Identities=17% Similarity=0.184 Sum_probs=137.9
Q ss_pred CCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccc
Q 012138 114 FYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAI 193 (470)
Q Consensus 114 ~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 193 (470)
..++....+++.++++.|...++.++||..|+..++..+.. .++ .|+..+..|.|..........
T Consensus 74 ~~nPt~~~le~~iaal~ga~~~l~fsSGmaA~~~al~~L~~---------~g~-~iV~~~~~Y~gT~~~l~~~~~----- 138 (409)
T KOG0053|consen 74 SGNPTRDVLESGIAALEGAAHALLFSSGMAAITVALLHLLP---------AGD-HIVATGDVYGGTLRILRKFLP----- 138 (409)
T ss_pred CCCCchHHHHHHHHHHhCCceEEEecccHHHHHHHHHHhcC---------CCC-cEEEeCCCcccHHHHHHHHHH-----
Confidence 45778899999999999999999999999999999987764 355 777777888664322211110
Q ss_pred cCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCccc
Q 012138 194 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS 273 (470)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~ 273 (470)
.|+ -...++...|++++++++++ ++++|++|.+.||+..+.+ +++|+++|+++|+++++|+..++..
T Consensus 139 -~~g---ie~~~vd~~~~~~~~~~i~~---~t~~V~~ESPsNPll~v~D----I~~l~~la~~~g~~vvVDnTf~~p~-- 205 (409)
T KOG0053|consen 139 -KFG---GEGDFVDVDDLKKILKAIKE---NTKAVFLESPSNPLLKVPD----IEKLARLAHKYGFLVVVDNTFGSPY-- 205 (409)
T ss_pred -HhC---ceeeeechhhHHHHHHhhcc---CceEEEEECCCCCcccccc----HHHHHHHHhhCCCEEEEeCCcCccc--
Confidence 111 11234433356666666665 8999999999999999998 9999999999999999999976431
Q ss_pred CCccccccCCCCccee--eccccccCCC-cceeEEEec-HHHHhhcCcCCccCCCCCCHHHHHHHHHHHHH
Q 012138 274 GRMLASDWEEVRPDMV--ILGKALGGGV-IPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDV 340 (470)
Q Consensus 274 G~~~~~~~~~~~pdi~--s~sK~l~gG~-~~ig~v~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~ 340 (470)
-++.+....||+ |.+|.++|.- .=.|.++.+ +++...+......-.+..+|..+......++.
T Consensus 206 ----~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~ll~Rglkt 272 (409)
T KOG0053|consen 206 ----NQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFLLSRGLKT 272 (409)
T ss_pred ----ccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHHHhcCCCCHHHHHHHhcCcch
Confidence 133344446887 6779999632 134456664 77777776554445566788887776655543
No 344
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.59 E-value=1.4e-12 Score=116.34 Aligned_cols=317 Identities=20% Similarity=0.255 Sum_probs=197.2
Q ss_pred CCHHHHHHHHHHHHHccccCC-------CCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCC
Q 012138 92 CHPKIMKALQEQAEKLTLSSR-------AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSI 164 (470)
Q Consensus 92 ~~p~v~~a~~~~~~~~~~~~~-------~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~ 164 (470)
-.++.++++.+--+.++.... ....++..++-+.|++++|.|.+-+|+++-+|-.+++..+.. +
T Consensus 29 Lt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg~D~~R~t~GARe~KfavMhal~~---------~ 99 (382)
T COG1103 29 LTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLGMDEVRVTAGAREAKFAVMHALCK---------E 99 (382)
T ss_pred CCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHhCCceeeecccchhhHHHHHHHhcc---------C
Confidence 456777777666554432211 113566778888899999999999999999999998887765 3
Q ss_pred CCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHH----hcCCCeEEEEEccccCCCccc
Q 012138 165 DEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFK----ESGDQIAGFLFEPIQGEAGVI 240 (470)
Q Consensus 165 g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~----~~~~~~~~vi~epi~n~~G~~ 240 (470)
|+ .|+ .+...|-.+..+....+-.....+-..+ | .+.+ +++...+.|+ +.++.+++.++..+.+..|.+
T Consensus 100 gd-~vV-~D~~aHYttyvAAEragl~v~eVp~tg~-P-ey~i---~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl 172 (382)
T COG1103 100 GD-WVV-VDSLAHYTTYVAAERAGLNVAEVPNTGY-P-EYKI---TPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNL 172 (382)
T ss_pred CC-EEE-EcCcchHHHHHHHHhcCCeEEecCCCCC-C-ceEe---cHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCc
Confidence 44 444 4444476666655444322221110000 1 1222 5555544443 334567778888889999999
Q ss_pred cCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecc--ccccCCCcceeEEEecHHHHhhcCcC
Q 012138 241 IPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPG 318 (470)
Q Consensus 241 ~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~s--K~l~gG~~~ig~v~~~~~~~~~~~~~ 318 (470)
.+ .+++.++|+++|++++...+|+ .|++- .+...+.+|+++-| |+++..- |+|.+..+++..+.....
T Consensus 173 ~D----akkva~ic~e~gvPlllN~AYt----~Grmp-vs~ke~g~DFiVgSGHKsmAAs~-PiGvl~~~eE~ae~V~r~ 242 (382)
T COG1103 173 AD----AKKVAKICREYGVPLLLNCAYT----VGRMP-VSGKEIGADFIVGSGHKSMAASA-PIGVLAMSEEWAEIVLRR 242 (382)
T ss_pred hh----hHHHHHHHHHcCCceEeeccee----ecccc-ccccccCCCEEEecCccchhccC-CeeEEeehhHHHHHHHhh
Confidence 98 9999999999999999999998 33332 33345667887655 8888654 999999999887754211
Q ss_pred -----------CccCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccc-eeEEE
Q 012138 319 -----------EHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG-LFNAV 384 (470)
Q Consensus 319 -----------~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g-~~~~~ 384 (470)
..+-|-.+.|+.... |++-...+ ..|.+.+ +..+++.+.|++++.-- .+.. ++.. -+.-
T Consensus 243 Sg~~~~~KEvellGCT~rGapivTlm--ASfP~V~eRVkrWdeEv-~kaR~fv~elEkigg~~--qlG~-rPk~HdLm~- 315 (382)
T COG1103 243 SGRAFPKKEVELLGCTVRGAPIVTLM--ASFPHVVERVKRWDEEV-EKARWFVAELEKIGGVK--QLGE-RPKNHDLMK- 315 (382)
T ss_pred cccccccceeeeecccccCchHHHHH--hcCHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhHH--HhCC-CCcccceee-
Confidence 123333344443222 22322222 2233333 34567777787775210 1111 1211 1122
Q ss_pred EeccCCC-------chhHHHHHHHHHHcCce-eccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhcc
Q 012138 385 EFDKTAL-------PVSAYDICLKMKERGIL-AKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELD 444 (470)
Q Consensus 385 ~~~~~~~-------~~~~~~~~~~l~~~Gv~-~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 444 (470)
|..+.. ......+.+.|+++||. +.|+...++.++. +..++|+++..+++++++++ +
T Consensus 316 -Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI~~G~Tk~~K~sv-yGl~~Eqve~V~~afkeI~e-k 380 (382)
T COG1103 316 -FETPVFHEIAKKHKRKGYFLYEELKKRGIHGIQPGQTKYFKLSV-YGLSWEQVEYVVDAFKEIAE-K 380 (382)
T ss_pred -ecCchHHHHHHhCcCCceeeHHHHHhcCccccccCceeEEEEEe-ecCCHHHHHHHHHHHHHHHH-h
Confidence 222211 12344567889999987 6678788899985 57899999999999999987 5
No 345
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.57 E-value=2e-12 Score=123.03 Aligned_cols=307 Identities=19% Similarity=0.193 Sum_probs=202.5
Q ss_pred CcHHHHHHHHhhhhCCCeEEec-CChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccC
Q 012138 117 DKFPVFAERLTSMFGYDMVLPM-NTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRG 195 (470)
Q Consensus 117 ~~~~~l~~~l~~~~~~~~v~~~-~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~ 195 (470)
++..+|++||+++.|+|.|-+. ++|+++=.+.+.+++.| +..+|. ..++++|+.+ +.||....+..+.+-.
T Consensus 109 ~li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~Y-He~rG~-~~R~~~LIP~-SAHGTNPASAam~G~~----- 180 (496)
T COG1003 109 ELIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAY-HESRGE-GHRNICLIPD-SAHGTNPASAAMAGFK----- 180 (496)
T ss_pred HHHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHH-HHHcCC-CcCcEEEeec-cccCCChhhHhhcCce-----
Confidence 4457899999999999987665 77999888888888876 333442 2344555555 4599877766665532
Q ss_pred CCCCCCCeeeecCC-----CHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc--
Q 012138 196 FGPLLPGHLKVDFG-----DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-- 268 (470)
Q Consensus 196 ~~~~~~~~~~~~~~-----d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-- 268 (470)
++.++-+ |+++|++++.+ +++++++.. .|.-|..- +.+++|.++.+++|.+|..|-+--
T Consensus 181 -------VV~V~~~~~G~VDlddLk~k~~~---~~AalMiTn-PsT~GvFE---~~I~ei~~ivH~~Gg~vY~DGANlNA 246 (496)
T COG1003 181 -------VVVVKCDENGNVDLDDLRAKAED---NLAALMITN-PSTLGVFE---EDIREICEIVHEAGGQVYYDGANLNA 246 (496)
T ss_pred -------EEEEecCCCCCccHHHHHHHhcc---ceeEEEecc-Ccccccch---hhHHHHHHHHHHcCCEEEecCcchhh
Confidence 2233322 89999999986 899999766 45567643 458999999999999999997644
Q ss_pred --CCcccCCc-cccccCCCCcceeecccccc-CCCcceeEEEecHHHHhhcCc----CC---------------ccCCCC
Q 012138 269 --GLARSGRM-LASDWEEVRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQP----GE---------------HGSTFG 325 (470)
Q Consensus 269 --g~g~~G~~-~~~~~~~~~pdi~s~sK~l~-gG~~~ig~v~~~~~~~~~~~~----~~---------------~~~t~~ 325 (470)
|..|.|.+ +...|+++. -||+-.-| ||- ..|-|.+++++...+.. .. ....|-
T Consensus 247 ~vG~~rPGd~G~DV~HlNLH---KTF~iPHGGGGP-G~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~ 322 (496)
T COG1003 247 IVGLARPGDMGFDVVHLNLH---KTFCIPHGGGGP-GAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPY 322 (496)
T ss_pred hhccccccccccceEEeecc---cccccCCCCCCC-CCCceehHhhccccCCCCcccCCCccccccCCCCccceeecccc
Confidence 45566654 233333332 13443333 454 66667777777665532 00 112233
Q ss_pred CCHHHHHHHHHHHHHHhhhhHHH---HHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEe--ccC----CCchhHH
Q 012138 326 GNPLASAVAIASLDVIRDEKLAE---RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF--DKT----ALPVSAY 396 (470)
Q Consensus 326 ~~~~~~aaa~a~l~~~~~~~~~~---~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~--~~~----~~~~~~~ 396 (470)
+|......+++.+..|..+.+.+ ..--+++++..+|+.- |+ ... .+.. .+.-++ +.. ..+.+..
T Consensus 323 Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~---y~-~~y--~~~~-~~~HE~ild~r~l~~~~Gv~~~ 395 (496)
T COG1003 323 GSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGY---YP-VPY--TGEN-RVAHECILDARPLKKETGVRAL 395 (496)
T ss_pred CcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhc---Cc-ccc--CCCC-cceeEEEeechHhHhhcCCcHH
Confidence 56666677777788777655443 4455788888888762 22 111 1221 222222 221 1257889
Q ss_pred HHHHHHHHcCceeccC-----CCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccCCCCCCCCCCCC
Q 012138 397 DICLKMKERGILAKPT-----HDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRKPKPADAP 457 (470)
Q Consensus 397 ~~~~~l~~~Gv~~~~~-----~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~~~~~~~~~~~ 457 (470)
+++++|++.|+..-+- =.+.+.+-|.-.-+++++|++++++.++.+ +.++......+++|
T Consensus 396 DvAKrLlD~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~-Ea~~~~~~~~~~~P 460 (496)
T COG1003 396 DVAKRLLDYGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIRE-EADAVPAGPLKDNP 460 (496)
T ss_pred HHHHHHHhcCCCCCcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHH-HHHhccCCccccCc
Confidence 9999999999986432 157889999999999999999999999999 88877654334443
No 346
>PLN02590 probable tyrosine decarboxylase
Probab=99.56 E-value=4.7e-12 Score=129.45 Aligned_cols=316 Identities=12% Similarity=0.046 Sum_probs=183.0
Q ss_pred CcHHHHHHHHhhhhCCCe---------EEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhccc
Q 012138 117 DKFPVFAERLTSMFGYDM---------VLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMS 187 (470)
Q Consensus 117 ~~~~~l~~~l~~~~~~~~---------v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~ 187 (470)
.+..++.+||++++|.+. -++++|||+||..|+.++|.......+.....+.++..+..-|-+...+..+-
T Consensus 170 ~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~il 249 (539)
T PLN02590 170 ELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIG 249 (539)
T ss_pred HHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHc
Confidence 445567788888887543 57899999999999999987533222211112245544544577666665554
Q ss_pred CCcccccCCCCCCC-CeeeecCCCHHHHHHHHHhc---CCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEE
Q 012138 188 CDNEAIRGFGPLLP-GHLKVDFGDITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 188 ~~~~~~~~~~~~~~-~~~~~~~~d~~~Le~~l~~~---~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~ 263 (470)
+-........+... +...+ |+++|+++|++. +..+-+|+.+--...+|.+-| +++|.++|++||++|++
T Consensus 250 Glg~~~vr~Vp~d~~~~~~m---d~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDp----l~~Ia~i~~~~g~WlHV 322 (539)
T PLN02590 250 GIHEENIRLLKTDSSTNYGM---PPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDP----LVPLGNIAKKYGIWLHV 322 (539)
T ss_pred CCCcccEEEEeCCCCCCCcC---CHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCC----HHHHHHHHHHhCCeEEE
Confidence 42211000011110 11223 899999999752 223455666555667999998 99999999999999999
Q ss_pred eccccCCcccCCccccccCCC-Ccceeecc--ccccCCCcceeEEEecHH--HHhhcCcC---C-c----------cC--
Q 012138 264 DEIQSGLARSGRMLASDWEEV-RPDMVILG--KALGGGVIPVSAVLADKE--VMLCIQPG---E-H----------GS-- 322 (470)
Q Consensus 264 Dev~~g~g~~G~~~~~~~~~~-~pdi~s~s--K~l~gG~~~ig~v~~~~~--~~~~~~~~---~-~----------~~-- 322 (470)
|.+|+|+...-+.+..-..++ ..|-+++. |.+.-.+ ..|+++.+.. +.+.+... . . ..
T Consensus 323 DaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~-~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~ 401 (539)
T PLN02590 323 DAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQ-TCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDW 401 (539)
T ss_pred ecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCc-CEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCcccc
Confidence 999998532211111111233 24655444 8888787 8898887643 22222100 0 0 00
Q ss_pred CC-CCCHHHHHHHHHHHHHHhhhhHHHHH---HHHHHHHHHHHHHHHhhCCCceEEE-eccceeEEEEeccCCC-----c
Q 012138 323 TF-GGNPLASAVAIASLDVIRDEKLAERS---AHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTAL-----P 392 (470)
Q Consensus 323 t~-~~~~~~~aaa~a~l~~~~~~~~~~~~---~~~~~~l~~~L~~l~~~~p~~~~~~-~~~g~~~~~~~~~~~~-----~ 392 (470)
+. .+-.+.....+.+|+.+..+.+.+.+ -++++++.+.|++. | .+..+ ++.=.++.|.+..... .
T Consensus 402 ~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~----~-~fel~~~~~l~iVcFr~~~~~~~~~~~~ 476 (539)
T PLN02590 402 QISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQD----P-SFEVVTTRYFSLVCFRLAPVDGDEDQCN 476 (539)
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----C-CeEEecCCceEEEEEEecCCCCCHHHHH
Confidence 11 12234455566667766665555544 44566666655442 2 23322 2233334444432110 1
Q ss_pred hhHHHHHHHHHHcCcee-ccC---CCCEEEEec-CCCCCHHHHHHHHHHHHHHHhcccC
Q 012138 393 VSAYDICLKMKERGILA-KPT---HDTIVRLTP-PLSISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 393 ~~~~~~~~~l~~~Gv~~-~~~---~~~~iR~~~-~~~~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
....++.++|.+.|... .+. +..++|+++ ...+++++|+.+++.|.+... ++-
T Consensus 477 ~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~-~~~ 534 (539)
T PLN02590 477 ERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHAS-KFT 534 (539)
T ss_pred HHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH-Hhc
Confidence 12346777777777553 332 356899976 456789999999999999887 653
No 347
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.54 E-value=1.2e-12 Score=122.50 Aligned_cols=321 Identities=13% Similarity=0.087 Sum_probs=184.5
Q ss_pred CHHHHHHHHHHHHHccccCCCC-----CCCcHHHHHHHHhhhhC----CCeEEecCChhHHHHHHHHHHHHhchhcccCC
Q 012138 93 HPKIMKALQEQAEKLTLSSRAF-----YNDKFPVFAERLTSMFG----YDMVLPMNTGAEGVETALKLARKWGYVKKKFS 163 (470)
Q Consensus 93 ~p~v~~a~~~~~~~~~~~~~~~-----~~~~~~~l~~~l~~~~~----~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~ 163 (470)
+.++++...+.++..+-+.+.| ..-.+..+++.+.++-| .+.|++|.|++.|+...|+++.+
T Consensus 88 p~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~--------- 158 (475)
T KOG0258|consen 88 PTDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIA--------- 158 (475)
T ss_pred CHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhc---------
Confidence 3455666666665543222222 23447778888877765 35799999999999999998876
Q ss_pred CCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcC--CC-eEEEEEccccCCCccc
Q 012138 164 IDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG--DQ-IAGFLFEPIQGEAGVI 240 (470)
Q Consensus 164 ~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~--~~-~~~vi~epi~n~~G~~ 240 (470)
..++-|++.-|-|.-.+.....+++. ..+|----...|.. |.++|++.+++.. -+ .+++++|| .||||.+
T Consensus 159 ~~~~GvliPiPQYPLYsAti~l~~~~---~v~YyLdEe~~W~l---d~~el~~~~~eA~k~i~~r~lvvINP-GNPTGqv 231 (475)
T KOG0258|consen 159 GKKTGVLIPIPQYPLYSATISLLGGT---QVPYYLDEESNWSL---DVAELERSVDEARKGINPRALVVINP-GNPTGQV 231 (475)
T ss_pred CCCCceEeecCCCchhHHHHHHhCCc---ccceeeccccCCCC---CHHHHHHHHHHHhccCCceEEEEECC-CCccchh
Confidence 23446777777775433322222221 00000000123444 8999999887753 23 35667999 9999999
Q ss_pred cCChhhHHHHHHHHHhcCcEEEEeccccC-CcccC-Ccccccc----CC-CCcc------eeeccccccC--CCcceeEE
Q 012138 241 IPPDGYLKAVRDLCSKYNILMIADEIQSG-LARSG-RMLASDW----EE-VRPD------MVILGKALGG--GVIPVSAV 305 (470)
Q Consensus 241 ~~~~~~l~~l~~l~~~~gillI~Dev~~g-~g~~G-~~~~~~~----~~-~~pd------i~s~sK~l~g--G~~~ig~v 305 (470)
. +++-+++|.++|.++|++|+.||||.. ....+ +++++.. .+ ..|| +-+.||++.| |. |-|++
T Consensus 232 l-s~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~-RGGYm 309 (475)
T KOG0258|consen 232 L-SEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQ-RGGYM 309 (475)
T ss_pred h-cHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecc-cCCee
Confidence 9 999999999999999999999999995 33344 4433321 12 1232 2266788663 54 55554
Q ss_pred E---ecHHHHhhcCcCCccCCCCCCHHHHHHH----------HHHHHH--HhhhhHHHHHHHHHHHHHHHHHHHHhhCCC
Q 012138 306 L---ADKEVMLCIQPGEHGSTFGGNPLASAVA----------IASLDV--IRDEKLAERSAHLGEELRQHLFKIQQQFPN 370 (470)
Q Consensus 306 ~---~~~~~~~~~~~~~~~~t~~~~~~~~aaa----------~a~l~~--~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~ 370 (470)
= ..+++.+.+.... ......+..+++.. ....+. -+++.+.+.++.++..+.+.++.+ +
T Consensus 310 Ev~n~~prv~~qi~Kl~-si~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~-----~ 383 (475)
T KOG0258|consen 310 ESLNRDPRVKQQIKKLA-SIKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSL-----E 383 (475)
T ss_pred ecccCChhHHHHHHHHH-hhhhcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhc-----C
Confidence 3 2333333221110 00000000111100 001111 123567777777777777777765 4
Q ss_pred ceEEEeccceeEEEEecc-CCC--------ch-hHHHHHHHHHHc-CceeccCC-----C--CEEEEecCCCCCHHHHHH
Q 012138 371 YVKEVRGRGLFNAVEFDK-TAL--------PV-SAYDICLKMKER-GILAKPTH-----D--TIVRLTPPLSISSNELQE 432 (470)
Q Consensus 371 ~~~~~~~~g~~~~~~~~~-~~~--------~~-~~~~~~~~l~~~-Gv~~~~~~-----~--~~iR~~~~~~~t~e~i~~ 432 (470)
.+.+-+.+|.|+.+.-.. +.. +. .....|.+|++. ||.+.|++ + -++|..+ . ... + +
T Consensus 384 gi~cn~~qGAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~Ti--L-p~~-~-~ 458 (475)
T KOG0258|consen 384 GISCNPVQGAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTI--L-PPG-L-E 458 (475)
T ss_pred ceeeccCccceeecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEee--c-Cch-h-H
Confidence 688889999999984322 110 11 122345677776 99999884 2 3466552 2 122 3 5
Q ss_pred HHHHHHHHHh
Q 012138 433 GSKALHDVLE 442 (470)
Q Consensus 433 ~~~~l~~~l~ 442 (470)
.++++.++-+
T Consensus 459 ~i~~~~~fH~ 468 (475)
T KOG0258|consen 459 IIEKFKKFHA 468 (475)
T ss_pred HHHHHHHHHH
Confidence 5666655444
No 348
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.54 E-value=6e-12 Score=118.92 Aligned_cols=318 Identities=18% Similarity=0.221 Sum_probs=194.4
Q ss_pred CCHHHHHHHHHHHHH-cccc--CCCCC--C---CcHHHHH-HHHhhhhCCCeE-EecCChhHHHHHHHHHHHHhchhccc
Q 012138 92 CHPKIMKALQEQAEK-LTLS--SRAFY--N---DKFPVFA-ERLTSMFGYDMV-LPMNTGAEGVETALKLARKWGYVKKK 161 (470)
Q Consensus 92 ~~p~v~~a~~~~~~~-~~~~--~~~~~--~---~~~~~l~-~~l~~~~~~~~v-~~~~sGteA~~~al~~~~~~~~~~~~ 161 (470)
..|.|.++.-..+.+ +..+ ...|| . +..+.++ ++..+++|.+.+ +=-.||++||.+++.++.+
T Consensus 38 ~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~anVQPhSGs~AN~av~~All~------- 110 (413)
T COG0112 38 TSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQANQAVYLALLQ------- 110 (413)
T ss_pred CCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCccccCCCCchHHHHHHHHHHcC-------
Confidence 357888887766643 3222 11222 1 2233333 345567788765 3346899999999988876
Q ss_pred CCCCCcEEEEEccCccccccc---hhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCc
Q 012138 162 FSIDEAIIVSCCGCFHGRTLA---AISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAG 238 (470)
Q Consensus 162 ~~~g~~~ii~~~~~yhg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G 238 (470)
||+ .|+..+-+ ||..+. ....++.- ++...-++.++...+ |.|++++...++ ++++||+=. +---
T Consensus 111 --pGD-timgm~l~-~GGHltHg~~v~~sG~~-~~~v~Y~vd~et~~I---DyD~~~k~a~e~--kPK~ii~G~--SaY~ 178 (413)
T COG0112 111 --PGD-TIMGLDLS-HGGHLTHGSPVNFSGKL-FNVVSYGVDPETGLI---DYDEVEKLAKEV--KPKLIIAGG--SAYS 178 (413)
T ss_pred --CCC-eEecccCC-CCCcccCCCCCCcccee-EEeEecccccccCcc---CHHHHHHHHHHh--CCCEEEECc--cccc
Confidence 666 77776666 443222 12223321 211111222233334 899999999887 778888632 2233
Q ss_pred cccCChhhHHHHHHHHHhcCcEEEEecccc-CCcccCCccccccCCCCcceeecc--ccccCCCcceeEEEec-HHHHhh
Q 012138 239 VIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLAD-KEVMLC 314 (470)
Q Consensus 239 ~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g~g~~G~~~~~~~~~~~pdi~s~s--K~l~gG~~~ig~v~~~-~~~~~~ 314 (470)
...| +++++++|++.|++|++|-+|- |+.-.|.+- +... ..|++|-+ |+|-|. |-|.|+++ +++.++
T Consensus 179 r~id----~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p--~P~~-~AdvVTtTTHKTlrGP--rGG~Il~~~eel~kk 249 (413)
T COG0112 179 RPID----FKRFREIADEVGAYLMVDMAHVAGLIAGGVHP--NPLP-HADVVTTTTHKTLRGP--RGGIILTNDEELAKK 249 (413)
T ss_pred cccC----HHHHHHHHHHhCceEEehHHHHHHHHhcccCC--CCCC-ccceEeCCcccCCCCC--CceEEEeccHHHHHH
Confidence 4444 9999999999999999999998 665555432 1122 24777544 888765 77778887 488888
Q ss_pred cCcCCccCCCCCCHHH-HHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEe--ccceeEEEEecc
Q 012138 315 IQPGEHGSTFGGNPLA-SAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR--GRGLFNAVEFDK 388 (470)
Q Consensus 315 ~~~~~~~~t~~~~~~~-~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~--~~g~~~~~~~~~ 388 (470)
+...-.....+++-+- +|+-..++....+ +++.+++.++++.|.+.|.+.+ +..+. ....++.+++..
T Consensus 250 in~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G------~~vvsGgTdnHl~lVDl~~ 323 (413)
T COG0112 250 INSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERG------FKVVSGGTDNHLVLVDLRS 323 (413)
T ss_pred hhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcC------CeEecCCccceEEEEEccc
Confidence 8654444444433332 2222234444433 4566777778888888887743 33332 234456666552
Q ss_pred CCCchhHHHHHHHHHHcCceec----cC------CCCEEEEecCCC----CCHHHHHHHHHHHHHHHhcccC
Q 012138 389 TALPVSAYDICLKMKERGILAK----PT------HDTIVRLTPPLS----ISSNELQEGSKALHDVLELDLP 446 (470)
Q Consensus 389 ~~~~~~~~~~~~~l~~~Gv~~~----~~------~~~~iR~~~~~~----~t~e~i~~~~~~l~~~l~~~~~ 446 (470)
. +....+....|.+.||.+. |. .+.-||+..|.. +.++|+++..+.|.+++. ...
T Consensus 324 ~--~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~-~~~ 392 (413)
T COG0112 324 K--GLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLD-GLK 392 (413)
T ss_pred C--CCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHh-ccc
Confidence 2 2356666667777799875 22 255689976643 568999999999999998 654
No 349
>PLN02263 serine decarboxylase
Probab=99.54 E-value=2e-11 Score=121.71 Aligned_cols=284 Identities=13% Similarity=0.035 Sum_probs=177.8
Q ss_pred cHHHHHHHHhhhhCCC----eEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccc
Q 012138 118 KFPVFAERLTSMFGYD----MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAI 193 (470)
Q Consensus 118 ~~~~l~~~l~~~~~~~----~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 193 (470)
...++-+|++++++.+ .-++|+||||||..|+.++|.+. .+ .++..+-.-|-+...+..+-+-....
T Consensus 134 ~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~--------~~-~vvy~S~~aH~Sv~KAa~llgi~~~~ 204 (470)
T PLN02263 134 FEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVF--------PD-GILYASRESHYSVFKAARMYRMECVK 204 (470)
T ss_pred HHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhc--------CC-cEEEEcCCccHHHHHHHHhcCCcceE
Confidence 3456777888888753 25889999999999999999842 12 24444444477766665554432111
Q ss_pred cCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCc-----EEEEecccc
Q 012138 194 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNI-----LMIADEIQS 268 (470)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gi-----llI~Dev~~ 268 (470)
. |.. +...+ |+++|+++|.+...++.+|+.+-...++|.+-| +++|.++|++||+ +|++|.+++
T Consensus 205 V---p~d-~~g~m---D~~aL~~aI~~d~~~P~iVvataGTT~~GAiDp----i~eIa~i~~~~g~~~~~iwlHVDAA~G 273 (470)
T PLN02263 205 V---DTL-VSGEI---DCADFKAKLLANKDKPAIINVNIGTTVKGAVDD----LDLVIKTLEECGFSQDRFYIHCDGALF 273 (470)
T ss_pred e---ccC-CCCcC---cHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCC----HHHHHHHHHHcCCccCCeeEEEeccch
Confidence 1 111 11223 899999999874334556666665778999998 9999999999997 999999999
Q ss_pred CCcc----cCCccccccCCCCcceeecc--ccccCCCcceeEEEecHHHHhhcCcC-----CccCCCCC--CHHHHHHHH
Q 012138 269 GLAR----SGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPG-----EHGSTFGG--NPLASAVAI 335 (470)
Q Consensus 269 g~g~----~G~~~~~~~~~~~pdi~s~s--K~l~gG~~~ig~v~~~~~~~~~~~~~-----~~~~t~~~--~~~~~aaa~ 335 (470)
|+.. .-..+.+. ...|-++++ |.+...+ +.|+++.++...+.+... ....+..+ +....+.++
T Consensus 274 G~~lPf~~~~~~~df~---~~vDSIsvD~HK~l~~P~-~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW 349 (470)
T PLN02263 274 GLMMPFVKRAPKVTFK---KPIGSVSVSGHKFVGCPM-PCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLW 349 (470)
T ss_pred hhHhhhcccccccCCC---cCccEEEECCccccCCCc-CEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHH
Confidence 8532 11112111 123555444 8887777 999999887665444221 01112222 222345566
Q ss_pred HHHHHHhhhhHHHH---HHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccC
Q 012138 336 ASLDVIRDEKLAER---SAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT 412 (470)
Q Consensus 336 a~l~~~~~~~~~~~---~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~ 412 (470)
.+|+.+..+++.+. ..++++++.+.|++.+ ......+....+.+. .+. + .+..+|..+.+.
T Consensus 350 ~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~g-----~~~~~~p~s~~V~f~--~p~---~------~~~~~gW~L~~~ 413 (470)
T PLN02263 350 YTLNRKGYRGFQKEVQKCLRNAHYLKDRLREAG-----ISAMLNELSSTVVFE--RPK---D------EEFVRRWQLACQ 413 (470)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCC-----CeEEeCCCceEEEEe--cCc---h------HHhhcceEEccC
Confidence 67776665554444 4456677777776642 222334455544443 221 1 123467766653
Q ss_pred CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 413 HDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 413 ~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
++.++++....++.+.++++++.|++...
T Consensus 414 -~~~~Hivvmphv~~~~id~fi~DL~~~~~ 442 (470)
T PLN02263 414 -GNIAHVVVMPSVTIEKLDYFLKELVEKRS 442 (470)
T ss_pred -CCcEEEEEcCCCCHHHHHHHHHHHHHHHh
Confidence 46789987777789999999999998877
No 350
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.51 E-value=1.3e-11 Score=116.49 Aligned_cols=303 Identities=15% Similarity=0.184 Sum_probs=157.7
Q ss_pred CcHHHHHHHHhhhhCC--CeEEecCChhHHH-HHHHHHHHHhchhc--cc-CCCCCcEEEEEccCccccccchhcccCCc
Q 012138 117 DKFPVFAERLTSMFGY--DMVLPMNTGAEGV-ETALKLARKWGYVK--KK-FSIDEAIIVSCCGCFHGRTLAAISMSCDN 190 (470)
Q Consensus 117 ~~~~~l~~~l~~~~~~--~~v~~~~sGteA~-~~al~~~~~~~~~~--~~-~~~g~~~ii~~~~~yhg~~~~~~~~~~~~ 190 (470)
+-..++.+.++++++. ++++...+.+-.+ .-++..+..++... +. ...++-++++..|+|-.+.......+-
T Consensus 69 ~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~Gi-- 146 (425)
T PF12897_consen 69 DGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHFGI-- 146 (425)
T ss_dssp S--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHCT---
T ss_pred CChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhhCc--
Confidence 3457788888888864 5676654444333 22333332222110 00 012355788899998222111111110
Q ss_pred ccccCCCCCCCCeeeecCC----CHHHHHHHHHhcCCCeEEEEEcc-ccCCCccccCChhhHHHHHHH-HHhcCcEEEEe
Q 012138 191 EAIRGFGPLLPGHLKVDFG----DITALEKIFKESGDQIAGFLFEP-IQGEAGVIIPPDGYLKAVRDL-CSKYNILMIAD 264 (470)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~----d~~~Le~~l~~~~~~~~~vi~ep-i~n~~G~~~~~~~~l~~l~~l-~~~~gillI~D 264 (470)
+.+.+|.+ |++.+|+++.+. +.++.|.|-| ..||+|.++ +.+..++|+.+ +...+..|+.|
T Consensus 147 -----------emi~VpM~~dGPDmD~Ve~LV~~D-~svKGiWcVP~ySNPtG~ty-Sde~vrrlA~m~~AA~DFRI~WD 213 (425)
T PF12897_consen 147 -----------EMIPVPMTEDGPDMDMVEELVAED-PSVKGIWCVPKYSNPTGITY-SDEVVRRLAAMKTAAPDFRIFWD 213 (425)
T ss_dssp -----------EEEEEEEETTEE-HHHHHHHTHTS-TTEEEEEE-SSS-TTT------HHHHHHHHHS--SSTT-EEEEE
T ss_pred -----------EEEecCCCCCCCCHHHHHHHHhcC-CccceEEeCCCccCCCCccC-CHHHHHHHhcCCcCCcCeEEEee
Confidence 11233332 899999998643 4799999999 789999999 99999999998 44689999999
Q ss_pred cccc--CCcccCCc------c-ccccCCCCcce----eeccccccCCCcceeEEEecHHHHhhcCcCCccCCCCCCHHHH
Q 012138 265 EIQS--GLARSGRM------L-ASDWEEVRPDM----VILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLAS 331 (470)
Q Consensus 265 ev~~--g~g~~G~~------~-~~~~~~~~pdi----~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~ 331 (470)
++|+ .+...... + .+...| .||. .|+||---+|- .++++.++++-++.+.......+.+.+-+.+
T Consensus 214 NAY~vHhL~~~~~~~~~~nil~~~~~AG-npdrv~~F~STSKITf~Ga-Gva~~aaS~~Nl~~~~~~~~~~tIgpdKvNQ 291 (425)
T PF12897_consen 214 NAYAVHHLYDEEPRDALLNILDACAKAG-NPDRVYVFASTSKITFPGA-GVAFFAASEANLAWIKKHLSVQTIGPDKVNQ 291 (425)
T ss_dssp -TTTT-BSSSSSS------HHHHHHHTT--TTSEEEEEESTTTS-TTS-S-EEEEE-HHHHHHHHHHHHHH-S---HHHH
T ss_pred cCceEeeccccccchhhhHHHHHHHHcC-CCCeEEEEecccccccCCc-ceeeeecCHHHHHHHHHHhcCceeCccHHHH
Confidence 9998 23111110 0 011122 4553 38889765665 8999999998888776555555666666666
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHH----HHHHHhhCC---CceEEEeccce-eEEEEeccCCCchhHHHHHHHHH
Q 012138 332 AVAIASLDVIRDEKLAERSAHLGEELRQH----LFKIQQQFP---NYVKEVRGRGL-FNAVEFDKTALPVSAYDICLKMK 403 (470)
Q Consensus 332 aaa~a~l~~~~~~~~~~~~~~~~~~l~~~----L~~l~~~~p---~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~l~ 403 (470)
..-...++..+ .++.++.++.++.++-+ ++.+..++. +...-..+.|. |+.+.... . .+.++++.++
T Consensus 292 LRHvrff~d~~-gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~-G---~AkrvV~lak 366 (425)
T PF12897_consen 292 LRHVRFFKDAE-GGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLD-G---TAKRVVELAK 366 (425)
T ss_dssp HHHHHHHHSHH-THHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEEST-T----HHHHHHHHH
T ss_pred HHHHHHhcChh-hHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCC-C---hHHHHHHHHH
Confidence 65443343222 14555555544444433 333333322 23333445555 44454433 2 7899999999
Q ss_pred HcCceeccCC----------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 404 ERGILAKPTH----------DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 404 ~~Gv~~~~~~----------~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
+.||.+.|.+ +..||++|++ -+.||++.+++.+.-+++
T Consensus 367 eAGV~LT~AGAtfPyg~DP~D~nIRiAPS~-P~leel~~Am~~~~~cv~ 414 (425)
T PF12897_consen 367 EAGVALTPAGATFPYGKDPRDSNIRIAPSY-PSLEELETAMDVFATCVK 414 (425)
T ss_dssp HTTEE---TTTTSGGG--TTS-EEEE--SS-S-HHHHHHHHHHHHHHHH
T ss_pred HhCceeCCCCCCCCCCCCCCCCcEEecCCC-CCHHHHHHHHHHHHHHHH
Confidence 9999988642 6789999875 688999999999988775
No 351
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.49 E-value=5.6e-13 Score=116.91 Aligned_cols=158 Identities=23% Similarity=0.338 Sum_probs=109.9
Q ss_pred HHHHHHHHhhhh--CCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCC
Q 012138 119 FPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGF 196 (470)
Q Consensus 119 ~~~l~~~l~~~~--~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 196 (470)
+.++++++++++ +.+.+++++||++|+..+++.+.. ++ +.|++..+.|++.........+..
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~---------~~-~~v~~~~~~~~~~~~~~~~~~g~~------ 65 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLG---------PG-DEVIVDANGHGSRYWVAAELAGAK------ 65 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCC---------CC-CEEEEeecccceehhhHHHhcCCE------
Confidence 367888999999 888999999999999999998754 23 478888888776652222222211
Q ss_pred CCCCCCeeeecCC-------CHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccC
Q 012138 197 GPLLPGHLKVDFG-------DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 269 (470)
Q Consensus 197 ~~~~~~~~~~~~~-------d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g 269 (470)
...++.+ +.+.+++... ..+++++++++.++++|...| +++|.++|+++|+++|+|++|.+
T Consensus 66 ------~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~g~~~~----~~~l~~~~~~~~~~li~D~a~~~ 133 (170)
T cd01494 66 ------PVPVPVDDAGYGGLDVAILEELKA--KPNVALIVITPNTTSGGVLVP----LKEIRKIAKEYGILLLVDAASAG 133 (170)
T ss_pred ------EEEeccCCCCccchhhhhhhhccc--cCceEEEEEecCcCCCCeEcC----HHHHHHHHHHcCCEEEEeccccc
Confidence 1111111 1224433332 247899999988999999997 79999999999999999999996
Q ss_pred CcccCCccccccCCCCcceeecc--ccccCCCcceeEEEec
Q 012138 270 LARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLAD 308 (470)
Q Consensus 270 ~g~~G~~~~~~~~~~~pdi~s~s--K~l~gG~~~ig~v~~~ 308 (470)
+......+ +.....+|+++.| |.+++ . ++|+++++
T Consensus 134 ~~~~~~~~--~~~~~~~d~~~~s~~K~~~~-~-~~G~l~~~ 170 (170)
T cd01494 134 GASPAPGV--LIPEGGADVVTFSLHKNLGG-E-GGGVVIVK 170 (170)
T ss_pred cccccccc--ccccccCCEEEEEcccccCC-C-ceEEEEeC
Confidence 64433221 2222346887666 99987 5 88988764
No 352
>PLN02271 serine hydroxymethyltransferase
Probab=99.48 E-value=8.1e-11 Score=118.26 Aligned_cols=286 Identities=13% Similarity=0.025 Sum_probs=165.9
Q ss_pred HHHhhhhCCCe----E-EecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchh--------cccCCc
Q 012138 124 ERLTSMFGYDM----V-LPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAI--------SMSCDN 190 (470)
Q Consensus 124 ~~l~~~~~~~~----v-~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~--------~~~~~~ 190 (470)
++..++++.+. + +-.-||+.||.+++..+.+ ||| .|+..+..+-|+..... ..++.
T Consensus 201 era~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~---------PGD-~IL~ldl~~GGHlshg~~~~~g~~vs~sG~- 269 (586)
T PLN02271 201 ERALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLLL---------PGD-RIMGLDSPSGGHMSHGYYTPGGKKVSGASI- 269 (586)
T ss_pred HHHHHHhCCcccccccceeeccHHHHHHHHHHHhcC---------CCC-EEEEecCCCCCchhcccccccccccccccc-
Confidence 34445567443 1 2233999999999987754 666 77777666433222111 11110
Q ss_pred ccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-C
Q 012138 191 EAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G 269 (470)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g 269 (470)
.++...-++.+....+ |++++++..... ++++|++....++ ...| +++++++|+++|++|++|.+|. |
T Consensus 270 ~~~~vpY~~d~~~g~I---Dyd~lek~a~~~--rPKLII~g~Sayp--r~~D----~~~i~eIAdevGA~LmvD~AH~aG 338 (586)
T PLN02271 270 FFESLPYKVNPQTGYI---DYDKLEEKALDF--RPKILICGGSSYP--REWD----YARFRQIADKCGAVLMCDMAHISG 338 (586)
T ss_pred eEEEEEcccccccCcc---CHHHHHHHhhhc--CCeEEEECchhcc--CcCC----HHHHHHHHHHcCCEEEEECccccc
Confidence 0000000000111112 889999855443 8999999775555 5666 9999999999999999999999 6
Q ss_pred CcccCCccccccCCCCcceeecc--ccccCCCcceeEEEecHH--------------------HHhhcCcCCccCCCCC-
Q 012138 270 LARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKE--------------------VMLCIQPGEHGSTFGG- 326 (470)
Q Consensus 270 ~g~~G~~~~~~~~~~~pdi~s~s--K~l~gG~~~ig~v~~~~~--------------------~~~~~~~~~~~~t~~~- 326 (470)
+-..|... .... ..|+++++ |+|.|. +-|.++.+++ +.+.+.........++
T Consensus 339 LIa~g~~~--sP~~-~aDvvt~TTHKtLrGP--rGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGp 413 (586)
T PLN02271 339 LVAAKECV--NPFD-YCDIVTSTTHKSLRGP--RGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGP 413 (586)
T ss_pred ccccCcCC--CCCc-CCcEEEeCCcccCCCC--CceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccCh
Confidence 53333211 1111 24877554 998865 3366777653 3333322112211122
Q ss_pred CHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHH
Q 012138 327 NPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK 403 (470)
Q Consensus 327 ~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~ 403 (470)
....+++...+++.+.. ..+.+++.++++.|.+.|.+.+-+ ++.. .....++++.+..- +.+...+.+.|.
T Consensus 414 hn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~G~~---vv~g-gTdnHlvLvDl~~~--g~~G~~ae~~Le 487 (586)
T PLN02271 414 HNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRRKCR---LVTG-GTDNHLLLWDLTTL--GLTGKNYEKVCE 487 (586)
T ss_pred hHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHCCCe---EeeC-CCCcceeeecCccc--CCCHHHHHHHHH
Confidence 22234444455665543 457777788888888888774322 2221 12344555555332 235666777777
Q ss_pred HcCceec----cC-----CCCEEEEecCCC----CCHHHHHHHHHHHHHHHh
Q 012138 404 ERGILAK----PT-----HDTIVRLTPPLS----ISSNELQEGSKALHDVLE 442 (470)
Q Consensus 404 ~~Gv~~~----~~-----~~~~iR~~~~~~----~t~e~i~~~~~~l~~~l~ 442 (470)
+.||.+. |+ .+..+||..+.. +.++|++++.+.|.++++
T Consensus 488 ~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 488 MCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred HcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 7799874 32 245689976543 567999999999998887
No 353
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.44 E-value=6.8e-12 Score=123.23 Aligned_cols=293 Identities=16% Similarity=0.160 Sum_probs=166.5
Q ss_pred CCCcHHHHHHHHhhhhCCCeEEe-cCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCC-ccc
Q 012138 115 YNDKFPVFAERLTSMFGYDMVLP-MNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD-NEA 192 (470)
Q Consensus 115 ~~~~~~~l~~~l~~~~~~~~v~~-~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~-~~~ 192 (470)
+.....+.++.+++.+|.++.+| +||.|.+|.+++.++.+ +|+ .|++..++ |-+...++.+++. +.|
T Consensus 64 p~G~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~~~---------~gd-~VLv~RN~-HkSv~~alil~ga~Pvy 132 (417)
T PF01276_consen 64 PEGIIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMALCR---------PGD-KVLVDRNC-HKSVYNALILSGAIPVY 132 (417)
T ss_dssp TBTHHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHHTT---------TTC-EEEEETT---HHHHHHHHHHTEEEEE
T ss_pred CccHHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHhcC---------CCC-EEEEcCCc-HHHHHHHHHHcCCeEEE
Confidence 34557888899999999988655 56667778888877765 455 77777777 9998888777764 333
Q ss_pred ccCCCCCCCCeeeecCC--CHHHHHHHHHhcCCCe--EEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc
Q 012138 193 IRGFGPLLPGHLKVDFG--DITALEKIFKESGDQI--AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 268 (470)
Q Consensus 193 ~~~~~~~~~~~~~~~~~--d~~~Le~~l~~~~~~~--~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~ 268 (470)
-.+-.....-...++.. +.+.++++|+++++.. +++++.. .+-.|.+.+ +++|.++|++++++|++||+|.
T Consensus 133 i~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~-PTY~Gv~~d----i~~I~~~~h~~~~~llvDEAhG 207 (417)
T PF01276_consen 133 IPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTS-PTYYGVCYD----IKEIAEICHKHGIPLLVDEAHG 207 (417)
T ss_dssp EEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEES-S-TTSEEE-----HHHHHHHHCCTECEEEEE-TT-
T ss_pred ecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeC-CCCCeEEEC----HHHHHHHhcccCCEEEEEcccc
Confidence 21110000001122100 2489999999875432 2355444 355799998 9999999999999999999998
Q ss_pred C-CcccCCccccccCCCCcc-------eeecc--ccccCCCcceeEEEecHHH---HhhcCc-CCccCCCCCCHHHHHHH
Q 012138 269 G-LARSGRMLASDWEEVRPD-------MVILG--KALGGGVIPVSAVLADKEV---MLCIQP-GEHGSTFGGNPLASAVA 334 (470)
Q Consensus 269 g-~g~~G~~~~~~~~~~~pd-------i~s~s--K~l~gG~~~ig~v~~~~~~---~~~~~~-~~~~~t~~~~~~~~aaa 334 (470)
+ |++. .+. .+......| +++-| |.+++ +...+++-.+.+. .+.++. .....|-+++-+.++..
T Consensus 208 ah~~F~-~lp-~~a~~~gad~~~~~~~~vvqS~HKtL~a-ltQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lmASl 284 (417)
T PF01276_consen 208 AHFGFH-PLP-RSALALGADRPNDPGIIVVQSTHKTLPA-LTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLMASL 284 (417)
T ss_dssp TTGGCS-GGG-TTCSSTTSS-CTSBEEEEEEEHHHHSSS--TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHHHHH
T ss_pred ccccCC-CCc-cchhhccCccccccceeeeechhhcccc-cccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHHHHH
Confidence 5 3333 222 122333345 66444 77663 3134445544331 122221 12344556778888888
Q ss_pred HHHHHHH-hh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceE-----EEeccce------------------eEE-----
Q 012138 335 IASLDVI-RD--EKLAERSAHLGEELRQHLFKIQQQFPNYVK-----EVRGRGL------------------FNA----- 383 (470)
Q Consensus 335 ~a~l~~~-~~--~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~-----~~~~~g~------------------~~~----- 383 (470)
..+.+.| .. +.+.++..++...+++.|+++... ..+. .+.+.+. .+.
T Consensus 285 D~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~~~~~~~lDP~K 362 (417)
T PF01276_consen 285 DVARAQMEEEEGRELLEEAIELAEEFRKKINRLNDI--WGFKVLGPEDVGGEGCWDLDPGENWHGFEGLADDYYMLDPTK 362 (417)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCCT---SSEESS-SEECTCCGCB--TT-TTT--TT--TTSEEE-TTE
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCC--ceEecCCccccCCccccccCccccchhchhcccCccccCCcE
Confidence 8887877 33 568888888899999998653221 1111 1222220 111
Q ss_pred --EEec---c----CCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHH
Q 012138 384 --VEFD---K----TALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSN 428 (470)
Q Consensus 384 --~~~~---~----~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e 428 (470)
+.++ . ...+.++..+.+.|+++||.+--.+.+.+-+.++...|++
T Consensus 363 ~ti~~pG~~~~g~~~~~Gi~g~~~~~~L~~~~I~~Ek~d~~~vL~l~t~G~t~~ 416 (417)
T PF01276_consen 363 LTINTPGIDADGELSELGIPGYIVEKYLREHGIQVEKTDLYNVLFLFTIGDTKE 416 (417)
T ss_dssp EEEE-STBETTSSB-SS---HHHHHHHHHHTTEE-SEEESSEEEEE--TTS-HH
T ss_pred EEEEccCcCcCCcccccCCCHHHHHHHHHHcCCEEEeccCccEEEEecCCCCCC
Confidence 1110 0 1125678889999999999987777777777766666654
No 354
>PLN02452 phosphoserine transaminase
Probab=99.44 E-value=2.7e-11 Score=118.92 Aligned_cols=323 Identities=10% Similarity=0.061 Sum_probs=194.7
Q ss_pred eEEeccCCcccccCCCCCHHHHHHHHHHHHHccc--------cCCC-CCCCcHHHHHHHHhhhhCCC----eEEecCChh
Q 012138 76 KYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTL--------SSRA-FYNDKFPVFAERLTSMFGYD----MVLPMNTGA 142 (470)
Q Consensus 76 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--------~~~~-~~~~~~~~l~~~l~~~~~~~----~v~~~~sGt 142 (470)
+.+.|..|... -+++|++++.+.+-.+.. +.+. -..+...+..+.|.++++.+ -+++..|||
T Consensus 7 ~~~~f~pGP~~-----lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt 81 (365)
T PLN02452 7 RVFNFSAGPAT-----LPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGAS 81 (365)
T ss_pred ceEeeeCCCCC-----CCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccH
Confidence 34578777554 459999998887643221 1110 01344567777888888642 356668899
Q ss_pred HHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccc-hhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhc
Q 012138 143 EGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLA-AISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKES 221 (470)
Q Consensus 143 eA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~ 221 (470)
.++++++..+.. ++++..++..+.| |.... ....-+...... .. +........+++++ +.
T Consensus 82 ~~~ea~~~nl~~---------~~~~~l~~~~G~f-g~r~~~~a~~~g~~~~~~-~~---~~~~~~~~~~~~~~----~~- 142 (365)
T PLN02452 82 TQFAAIPLNLCK---------PGDKADFVVTGSW-SKKAAKEAKKYCKTNVIA-SG---KDEKYTKIPSVSEW----EL- 142 (365)
T ss_pred HHHHHHHHhcCC---------CCCeEEEEECCHH-HHHHHHHHHHhCCCcEEE-ec---CCCCCCCCCChHHc----CC-
Confidence 999999987754 4554555556555 32221 111111100000 00 00000001145543 21
Q ss_pred CCCeEEEEEccccCCCccc-cCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCc
Q 012138 222 GDQIAGFLFEPIQGEAGVI-IPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVI 300 (470)
Q Consensus 222 ~~~~~~vi~epi~n~~G~~-~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~ 300 (470)
..+.+.|.+.+....+|+. .+ ++++. ++++|+|.+++ + .+.....+.+++ |+.+.-|.+| ..
T Consensus 143 ~~~~~~v~~~hnETstGv~~~~----~~~i~------~~~lvVDa~Ss-~--g~~pidv~~~~v--~~~saqK~lG-P~- 205 (365)
T PLN02452 143 TPDAKFVHICANETIHGVEFKD----YPDVG------NVPLVADMSSN-F--LSKPVDVSKYGV--IYAGAQKNVG-PS- 205 (365)
T ss_pred CCCCcEEEECCCCCCCcEecCc----ccccC------CCeEEEECCcc-c--cCcccCHHHcCE--EEEecccccC-CC-
Confidence 1256666666645568985 43 44442 38999999998 2 233344555665 6667779896 33
Q ss_pred ceeEEEecHHHHhhcCcC-----------CccCCC-CCCHHHHHHHHHHHHHHhh----hhHHHHHHHHHHHHHHHHHHH
Q 012138 301 PVSAVLADKEVMLCIQPG-----------EHGSTF-GGNPLASAVAIASLDVIRD----EKLAERSAHLGEELRQHLFKI 364 (470)
Q Consensus 301 ~ig~v~~~~~~~~~~~~~-----------~~~~t~-~~~~~~~aaa~a~l~~~~~----~~~~~~~~~~~~~l~~~L~~l 364 (470)
.+|.+++++++++..... ...+++ +++...+.+..++|+++.+ +.+.++.+++.+++++.|++.
T Consensus 206 Gl~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~ 285 (365)
T PLN02452 206 GVTIVIIRKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDES 285 (365)
T ss_pred CeEEEEEcHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhC
Confidence 578999999998765432 122333 5677788888899998876 356777778888888888764
Q ss_pred HhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 365 QQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 365 ~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~--~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
..-+...+..-......+.+.+.... ...+|.+.+.++|+...+++ -+.+|++.--.++.++++.+++.++++-+
T Consensus 286 ~G~y~~~~~~~~rs~~~vsF~~~~~~---~~~~f~~~~~~~g~~~~~G~r~~gg~R~s~yna~~~~~v~~L~~~m~~f~~ 362 (365)
T PLN02452 286 NGFYVCPVEKSVRSLMNVPFTLGGSE---LEAEFVKEAAKAGMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQA 362 (365)
T ss_pred CCcccCCCChHHhCCeEEEEEcCCch---hHHHHHHHHHHCCCcccCCccccCceEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 21110011000012234444444332 67889999999999998875 22399998888999999999999998866
No 355
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.44 E-value=5.7e-11 Score=121.67 Aligned_cols=301 Identities=16% Similarity=0.084 Sum_probs=168.0
Q ss_pred CcHHHHHHHHhhhhC-C--------------CeEEecCChhHHHHHHHHHHHHhchhcc---------cCC------CCC
Q 012138 117 DKFPVFAERLTSMFG-Y--------------DMVLPMNTGAEGVETALKLARKWGYVKK---------KFS------IDE 166 (470)
Q Consensus 117 ~~~~~l~~~l~~~~~-~--------------~~v~~~~sGteA~~~al~~~~~~~~~~~---------~~~------~g~ 166 (470)
++...+.+|++++++ . ..-++|+|||+||..|+.++|....... |.. ..+
T Consensus 129 ~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~ 208 (522)
T TIGR03799 129 PLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYD 208 (522)
T ss_pred HHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCC
Confidence 344556667777653 1 1257899999999999999987532111 000 001
Q ss_pred cEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCC-----CHHHHHHHHHh---cCCCeEEEEEccccCCCc
Q 012138 167 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG-----DITALEKIFKE---SGDQIAGFLFEPIQGEAG 238 (470)
Q Consensus 167 ~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~Le~~l~~---~~~~~~~vi~epi~n~~G 238 (470)
..+|.....-|.+...+....+.... .+..+|.+ |+++|+++|++ .+.++.+|+.....+.+|
T Consensus 209 ~~~v~~S~~~H~S~~kaa~~lglg~~---------~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tG 279 (522)
T TIGR03799 209 GLAILVSERGHYSLGKAADVLGIGRD---------NLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETG 279 (522)
T ss_pred ceEEEECCCchHHHHHHHHHcCCCcc---------cEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCC
Confidence 23344444447666554433332110 11222221 89999999974 222333444334456899
Q ss_pred cccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCC-Ccceeecc--ccccCCCcceeEEEec-HHHHhh
Q 012138 239 VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-RPDMVILG--KALGGGVIPVSAVLAD-KEVMLC 314 (470)
Q Consensus 239 ~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~-~pdi~s~s--K~l~gG~~~ig~v~~~-~~~~~~ 314 (470)
.+.| +++|.++|++||+++++|.+|+|....-.-+.....++ ..|.++++ |.+.+.+ .+|+++.+ +++.+.
T Consensus 280 aiDp----l~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~-g~G~llvr~~~~~~~ 354 (522)
T TIGR03799 280 NIDP----LDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPM-GAGMVLFKDPALMSA 354 (522)
T ss_pred CcCC----HHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCc-ccEEEEEeCHHHHHH
Confidence 9999 99999999999999999999986321111000011243 46888777 8787776 88998875 455554
Q ss_pred cCcC-----Ccc------CCCCCC-HHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEE-ecc
Q 012138 315 IQPG-----EHG------STFGGN-PLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEV-RGR 378 (470)
Q Consensus 315 ~~~~-----~~~------~t~~~~-~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~-~~~ 378 (470)
+... ..+ .++.++ +.......++|+.+.. +.+.++..++++++.+.|++. | .+..+ .+.
T Consensus 355 ~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~----~-~~el~~~p~ 429 (522)
T TIGR03799 355 IEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQ----P-DFELVTEPE 429 (522)
T ss_pred hccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhC----C-CeEEecCCC
Confidence 4331 000 112121 1222246677777665 446666666777777777653 2 22222 222
Q ss_pred ceeEEEEeccCCC-------------------chhHHHHHHHHHHcCceecc-C----------CCCEEEEec-CCCCCH
Q 012138 379 GLFNAVEFDKTAL-------------------PVSAYDICLKMKERGILAKP-T----------HDTIVRLTP-PLSISS 427 (470)
Q Consensus 379 g~~~~~~~~~~~~-------------------~~~~~~~~~~l~~~Gv~~~~-~----------~~~~iR~~~-~~~~t~ 427 (470)
-.++.+.+..... ..-...+.+++.+.|..... . +..++|+++ ...+|+
T Consensus 430 l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~ 509 (522)
T TIGR03799 430 LCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTTH 509 (522)
T ss_pred ccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCCCCH
Confidence 3344444322110 00123566777778765321 1 124689976 445788
Q ss_pred HHHHHHHHH
Q 012138 428 NELQEGSKA 436 (470)
Q Consensus 428 e~i~~~~~~ 436 (470)
++|+.+++.
T Consensus 510 ~~i~~~l~~ 518 (522)
T TIGR03799 510 EILQDILDE 518 (522)
T ss_pred HHHHHHHHH
Confidence 888887654
No 356
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.44 E-value=1.2e-11 Score=120.93 Aligned_cols=281 Identities=19% Similarity=0.195 Sum_probs=155.6
Q ss_pred HHHhhhhCCC----eE-EecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcc------cCC-cc
Q 012138 124 ERLTSMFGYD----MV-LPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISM------SCD-NE 191 (470)
Q Consensus 124 ~~l~~~~~~~----~v-~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~------~~~-~~ 191 (470)
++..++++.+ .+ +=..||+.|+.+++.++.+ ||| .|+.++.. ||..+..-.. +.. ..
T Consensus 73 ~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl~---------pGD-~Im~l~l~-~GGHlshg~~~~~~~~~~~~~~ 141 (399)
T PF00464_consen 73 ERAKELFGAEPKEWYANVQPHSGSQANLAVYMALLK---------PGD-TIMGLSLP-HGGHLSHGSSVNFKKISASGLY 141 (399)
T ss_dssp HHHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT----------TT--EEEEEEGG-GT--GGGT-TTSHSBSSHHHHH
T ss_pred HHHHHHhCCCcccceEEeecCCchHHHHHHHHHHHh---------hcC-cEEecChh-hcccccccccccccccccccce
Confidence 4455677877 54 4457899999999988876 566 77777666 3332211000 000 00
Q ss_pred cccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-CC
Q 012138 192 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GL 270 (470)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g~ 270 (470)
+....-++.++...+ |.+++++.++++ ++++|++..-. .-..+| +++++++|++.|++|++|-+|. |+
T Consensus 142 ~~~~~y~~d~~~~~I---D~d~l~~~a~~~--kPklIi~G~S~--y~~~~d----~~~~reIad~vga~l~~D~sH~~GL 210 (399)
T PF00464_consen 142 FESVPYPVDPDTGLI---DYDELEKLAKEH--KPKLIICGASS--YPRPID----FKRFREIADEVGAYLMADISHIAGL 210 (399)
T ss_dssp SEEEEEEB-TTTSSB----HHHHHHHHHHH----SEEEEE-SS--TSS-------HHHHHHHHHHTT-EEEEE-TTTHHH
T ss_pred EEEEeeeeecCCCeE---CHHHHHHHHhhc--CCCEEEECchh--ccCccC----HHHHHHHHHhcCcEEEecccccccc
Confidence 100000111222333 899999999987 78889987622 122333 8999999999999999999998 66
Q ss_pred cccCCccccccCCCCcceeecc--ccccCCCcceeEEEec--------------HHHHhhcCcCCccCCCCCCHH-HHHH
Q 012138 271 ARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLAD--------------KEVMLCIQPGEHGSTFGGNPL-ASAV 333 (470)
Q Consensus 271 g~~G~~~~~~~~~~~pdi~s~s--K~l~gG~~~ig~v~~~--------------~~~~~~~~~~~~~~t~~~~~~-~~aa 333 (470)
.-.|.. .+.+.. .|+++.| |+|.|. +-|.|+.+ +++.+.+......+..+++.. ..++
T Consensus 211 Ia~g~~--~~P~~~-ADvvt~sThKtl~GP--rggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaa 285 (399)
T PF00464_consen 211 IAGGLF--PNPFPY-ADVVTGSTHKTLRGP--RGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAA 285 (399)
T ss_dssp HHTTSS----GCCT-SSEEEEESSGGG-SS--S-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHH
T ss_pred eehhee--cCcccc-ceEEEeecccccccc--CceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHH
Confidence 444432 122332 5888665 888865 67788888 788887764333333332233 3333
Q ss_pred HHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceec
Q 012138 334 AIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK 410 (470)
Q Consensus 334 a~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~ 410 (470)
...++..+.. .++.+++.++++.|.+.|.+.+-+ .+.. .....++++.+... +.+..+..+.|.+.||.+.
T Consensus 286 lAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G~~---v~~g-gTd~H~vlvd~~~~--~~~g~~a~~~Le~~gI~vn 359 (399)
T PF00464_consen 286 LAVALKEALSPEFKEYAKQVVKNAKALAEALQERGFK---VVTG-GTDNHQVLVDLRSF--GIDGKEAEKALEEAGIIVN 359 (399)
T ss_dssp HHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-E---EGGG-S-SSSEEEEEGGGG--TS-HHHHHHHHHHTTEE-E
T ss_pred HHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhCCcE---EEEC-CCCCCeEEEEeccc--ccchHHHHHHHHhcCeeec
Confidence 3345555433 467778888888888888885432 1211 12345666665432 2367778888888899985
Q ss_pred ----cCC-----CCEEEEecCC----CCCHHHHHHHHHHH
Q 012138 411 ----PTH-----DTIVRLTPPL----SISSNELQEGSKAL 437 (470)
Q Consensus 411 ----~~~-----~~~iR~~~~~----~~t~e~i~~~~~~l 437 (470)
|.. ...+||..+. ...++|++++.+.|
T Consensus 360 kn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~I 399 (399)
T PF00464_consen 360 KNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKEIAELI 399 (399)
T ss_dssp EE--TTTSTTTT-SEEEEESHHHHHTT--HHHHHHHHHHH
T ss_pred ccccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHHHHhhC
Confidence 332 4679997543 35677777766543
No 357
>PRK15029 arginine decarboxylase; Provisional
Probab=99.41 E-value=1e-10 Score=123.14 Aligned_cols=308 Identities=14% Similarity=0.070 Sum_probs=183.2
Q ss_pred CcHHHHHHHHhhhhCCCeE-EecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCC-ccccc
Q 012138 117 DKFPVFAERLTSMFGYDMV-LPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD-NEAIR 194 (470)
Q Consensus 117 ~~~~~l~~~l~~~~~~~~v-~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~-~~~~~ 194 (470)
....+.++..++.+|.++. +.+||.|.+|.+++..+.. +|+ +|++..++ |-+...++.+++. |.|..
T Consensus 205 G~I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~~---------~gd-~Vlv~RN~-HKSv~~al~L~ga~Pvyl~ 273 (755)
T PRK15029 205 GAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMT---------DND-VVVVDRNC-HKSIEQGLILTGAKPVYMV 273 (755)
T ss_pred cHHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhcC---------CCC-EEEeeccc-HHHHHHHHHHcCCeEEEec
Confidence 4456777888888998875 5567777778777776654 455 77777777 9998888888764 33322
Q ss_pred CCCCCCCC-eeeec--CCCHHHHHHHHHhcCC-------CeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEe
Q 012138 195 GFGPLLPG-HLKVD--FGDITALEKIFKESGD-------QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIAD 264 (470)
Q Consensus 195 ~~~~~~~~-~~~~~--~~d~~~Le~~l~~~~~-------~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~D 264 (470)
+-..- .+ ...++ +-+++.+++++++++. +++++++.. .+-.|.+.+ +++|.++|+++|++|++|
T Consensus 274 P~~~~-~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~-PTY~Gv~~d----i~~I~~~~h~~~~~llvD 347 (755)
T PRK15029 274 PSRNR-YGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTN-CTYDGVCYN----AKEAQDLLEKTSDRLHFD 347 (755)
T ss_pred ccccc-cCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEEC-CCCcceeeC----HHHHHHHHHhcCCeEEEE
Confidence 11100 00 01110 0148999999987642 223566544 355799998 999999999999999999
Q ss_pred ccccCCcccCCcccc-ccC-----C-CCcc-eeecc--ccccCCCcceeEEEecHH--HH--hhcCc-CCccCCCCCCHH
Q 012138 265 EIQSGLARSGRMLAS-DWE-----E-VRPD-MVILG--KALGGGVIPVSAVLADKE--VM--LCIQP-GEHGSTFGGNPL 329 (470)
Q Consensus 265 ev~~g~g~~G~~~~~-~~~-----~-~~pd-i~s~s--K~l~gG~~~ig~v~~~~~--~~--~~~~~-~~~~~t~~~~~~ 329 (470)
|+|.+...-...+.- ... . ..+| +++-| |.+++ +...+++-.+.. .+ +.++. .....|-+++-+
T Consensus 348 EAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~a-lTQaS~LHv~~~~~~id~~r~~~~l~~~qSTSPSY~ 426 (755)
T PRK15029 348 EAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNA-LSQASYIHVREGRGAINFSRFNQAYMMHATTSPLYA 426 (755)
T ss_pred CccccccccCccccccccccccccccCCCceEEEEchhhcccc-hhhhhhheeCCCccccCHHHHHHHHHHHcCCCcHHH
Confidence 999852222222211 111 1 3467 65444 77662 201122223211 11 12211 123345567777
Q ss_pred HHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhC------------CCc-----------------------
Q 012138 330 ASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQF------------PNY----------------------- 371 (470)
Q Consensus 330 ~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~------------p~~----------------------- 371 (470)
.+|..-.+.+.++. +.+.++..+....+++.+.++...+ |..
T Consensus 427 LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 506 (755)
T PRK15029 427 ICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTV 506 (755)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhccccccccccccccccCccccccccccccccccccchhhhccc
Confidence 77777777777763 4567777778888888887654210 000
Q ss_pred --eEEEec--c--c------ee-------EEEEecc-CCC------chhHHHHHHHHHHcCceeccCCCCEEEEecCCCC
Q 012138 372 --VKEVRG--R--G------LF-------NAVEFDK-TAL------PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSI 425 (470)
Q Consensus 372 --~~~~~~--~--g------~~-------~~~~~~~-~~~------~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~ 425 (470)
+....+ . | .+ +.+.+.. ..+ +..+..+.+.|.++||.+--.+...+-+.++...
T Consensus 507 ~~~~~~~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L~~~gI~~E~~~~~~vL~l~s~g~ 586 (755)
T PRK15029 507 QDCWVMHPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTTDFQIMFLFSMGV 586 (755)
T ss_pred cceeeecccccccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHHHHcCCEEEecCCCeEEEEeCCCC
Confidence 010100 0 0 00 0011100 000 2234589999988899998777888888888899
Q ss_pred CHHHHHHHHHHHHHHHh
Q 012138 426 SSNELQEGSKALHDVLE 442 (470)
Q Consensus 426 t~e~i~~~~~~l~~~l~ 442 (470)
|++++++++++|.++-+
T Consensus 587 t~~~~~~L~~aL~~~~~ 603 (755)
T PRK15029 587 TRGKWGTLVNTLCSFKR 603 (755)
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 99999999999988755
No 358
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.37 E-value=1.7e-10 Score=116.03 Aligned_cols=295 Identities=18% Similarity=0.134 Sum_probs=172.4
Q ss_pred CCHHHHHHHHHHHHHccccCCCC--CCCcHHHHHHHHhhhhCC-Ce--EEecCChhHHHHHHHHHHHHhchhcc---cCC
Q 012138 92 CHPKIMKALQEQAEKLTLSSRAF--YNDKFPVFAERLTSMFGY-DM--VLPMNTGAEGVETALKLARKWGYVKK---KFS 163 (470)
Q Consensus 92 ~~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~l~~~l~~~~~~-~~--v~~~~sGteA~~~al~~~~~~~~~~~---~~~ 163 (470)
.++...+.+...+.+.......+ ......++..+++++++. +. -.||+||||||..++.+++..+.... +..
T Consensus 74 ~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~ 153 (460)
T COG0076 74 VPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGK 153 (460)
T ss_pred CHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 45667777777766533222222 223345666777787765 33 58999999999999999987543111 111
Q ss_pred CCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEE--EEEccccCCCcccc
Q 012138 164 IDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAG--FLFEPIQGEAGVII 241 (470)
Q Consensus 164 ~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~--vi~epi~n~~G~~~ 241 (470)
+++...|++....|-+...+..+-+-.... .+..+....+ |+++|++++++ .+.. |+..-...++|.+-
T Consensus 154 ~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~---v~~~~~~~~i---d~~~l~~~i~~---~t~~g~vV~~aGtT~~G~iD 224 (460)
T COG0076 154 PGGKPNIVCSETAHFSFEKAARYLGLGLRR---VPTVPTDYRI---DVDALEEAIDE---NTIGGVVVGTAGTTDTGSID 224 (460)
T ss_pred cCCCCeEEecCcchhHHHHHHHHhCCCcee---EEeccCcccc---CHHHHHHHHHh---hccCceEEEEecCCCCCccC
Confidence 112234445555587766665554422111 1111112333 89999999998 3443 66555578899999
Q ss_pred CChhhHHHHHHHHHhcCcEEEEeccccCCcc-----cCCccccccCCCCcceeecc--ccccCCCcceeEEEecHH--HH
Q 012138 242 PPDGYLKAVRDLCSKYNILMIADEIQSGLAR-----SGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKE--VM 312 (470)
Q Consensus 242 ~~~~~l~~l~~l~~~~gillI~Dev~~g~g~-----~G~~~~~~~~~~~pdi~s~s--K~l~gG~~~ig~v~~~~~--~~ 312 (470)
| +++|.++|++||+++++|.+++||-. .+. |.+...+ .|.++++ |.+-..+ +.|+++.+++ +.
T Consensus 225 d----i~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~-~~f~l~~--vdSIt~d~HK~g~aP~-~~G~il~rd~e~l~ 296 (460)
T COG0076 225 D----IEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGR-WDFGLEG--VDSITVDGHKYGLAPI-GCGVVLFRDEEALR 296 (460)
T ss_pred C----HHHHHHHHHHcCCcEEEEccccceeecccCccch-hhcCCCC--ceEEEECcccccCCCC-CceEEEEECHHHhh
Confidence 8 99999999999999999999998532 111 1122112 2555544 6655565 8889987654 43
Q ss_pred hhcC--c-CCcc---CCC----CCCHHHHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHHHhhCCCceE-EEecc
Q 012138 313 LCIQ--P-GEHG---STF----GGNPLASAVAIASLDVIRDEK---LAERSAHLGEELRQHLFKIQQQFPNYVK-EVRGR 378 (470)
Q Consensus 313 ~~~~--~-~~~~---~t~----~~~~~~~aaa~a~l~~~~~~~---~~~~~~~~~~~l~~~L~~l~~~~p~~~~-~~~~~ 378 (470)
+.+. . ...+ .++ +-+....+++++.++.+..++ +.++..++.+++.+.|+++. .+. ...+.
T Consensus 297 ~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~-----~~e~~~~p~ 371 (460)
T COG0076 297 RILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLG-----DFELVNEPE 371 (460)
T ss_pred hhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCC-----CcEeecCCc
Confidence 3332 1 1111 111 222335566667777775544 55555578888888887752 122 22356
Q ss_pred ceeEEEEeccCCCchhHHHHHHHHHHcCceec
Q 012138 379 GLFNAVEFDKTALPVSAYDICLKMKERGILAK 410 (470)
Q Consensus 379 g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~ 410 (470)
...+.+..+... ....+..+++.+.|..+.
T Consensus 372 l~~V~fr~~~~~--~~~~~~~~~~~~~gw~v~ 401 (460)
T COG0076 372 LPIVAFRLKDDE--DTLADLSERLDRRGWQVP 401 (460)
T ss_pred cceEEEEcCCcc--cchhchHHHHHhcCceee
Confidence 666667663221 013445556666676654
No 359
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.36 E-value=7.9e-10 Score=108.16 Aligned_cols=340 Identities=18% Similarity=0.190 Sum_probs=191.8
Q ss_pred eEEeccCCcccccCCCCCHHHHHHHHHHHHHccccCCCC-CCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHH
Q 012138 76 KYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAF-YNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARK 154 (470)
Q Consensus 76 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~ 154 (470)
.+||+.+-.+... ..++..++|.. . ...| -.+...+|++..++++|.+.+++|.+|..+...+++...+
T Consensus 42 V~IDLrSDTgT~a---pS~~m~aAM~~----G---DD~Y~gdpSv~~Lee~vael~G~E~alpthqGRgaE~Il~~~~~~ 111 (467)
T TIGR02617 42 VFIDLLTDSGTGA---VTQSMQAAMMR----G---DEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIK 111 (467)
T ss_pred eEEECccCCCCCC---CCHHHHHHHHc----C---CcccccCchHHHHHHHHHHHhCCceEEECCCCchHHHHHHHhhcc
Confidence 4689988755421 34566666654 1 1112 2445689999999999999999999999999998886654
Q ss_pred hchhcccCCCCCcEEE-----EEccCcccccc-chhcccCCccccc----CCCCCCC-C-eeeecCCCHHHHHHHHHhcC
Q 012138 155 WGYVKKKFSIDEAIIV-----SCCGCFHGRTL-AAISMSCDNEAIR----GFGPLLP-G-HLKVDFGDITALEKIFKESG 222 (470)
Q Consensus 155 ~~~~~~~~~~g~~~ii-----~~~~~yhg~~~-~~~~~~~~~~~~~----~~~~~~~-~-~~~~~~~d~~~Le~~l~~~~ 222 (470)
++|+..++ +....||-.+. +...+++-..... .+.+... . .-.+ |+++|+++|++++
T Consensus 112 --------~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~---dl~~le~~I~~~g 180 (467)
T TIGR02617 112 --------KREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNF---DLEGLERGIEEVG 180 (467)
T ss_pred --------cccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCc---CHHHHHHHHhhcC
Confidence 02221111 11223333322 2222332110000 0000000 0 0112 8999999998754
Q ss_pred -CCeEEEEEccccC-CCccccCChhhHHHHHHHHHhcCcEEEEecccc----CC------cccCCcc---ccccCCCCcc
Q 012138 223 -DQIAGFLFEPIQG-EAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS----GL------ARSGRML---ASDWEEVRPD 287 (470)
Q Consensus 223 -~~~~~vi~epi~n-~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~----g~------g~~G~~~---~~~~~~~~pd 287 (470)
+++..+.++-.+| -+|.++ |.+.++++.++|++||+.++.|.+.- -| +..+... +-+.+. ..|
T Consensus 181 ~~~i~~v~~tlt~N~~GGqpv-slenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~-~aD 258 (467)
T TIGR02617 181 PNNVPYIVATITCNSAGGQPV-SLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYK-YAD 258 (467)
T ss_pred CCCceeeeeeEEEecCCCEEe-CHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhc-cCC
Confidence 3455554444444 478888 99999999999999999999997653 01 2222211 001111 236
Q ss_pred ee--eccccccCCCcceeEEE-ecHH----HHhhcCc----CCccCCCCC-CHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 012138 288 MV--ILGKALGGGVIPVSAVL-ADKE----VMLCIQP----GEHGSTFGG-NPLASAVAIASLDVIRDEKLAERSAHLGE 355 (470)
Q Consensus 288 i~--s~sK~l~gG~~~ig~v~-~~~~----~~~~~~~----~~~~~t~~~-~~~~~aaa~a~l~~~~~~~~~~~~~~~~~ 355 (470)
.+ |+||.++. |+|.++ ++++ +.+..+. .....||++ +.--+.+....|+..-++++.++.-.-.+
T Consensus 259 svt~slsKglgA---pvGg~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~qv~ 335 (467)
T TIGR02617 259 MLAMSAKKDAMV---PMGGLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRINQVQ 335 (467)
T ss_pred EEEEEcCCCCCC---cccceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHHHHHHH
Confidence 55 66676652 655544 4443 3333222 234556653 32333333334555445556666666677
Q ss_pred HHHHHHHHHHhhCCCceEEEeccceeEEEEeccCC-------CchhHHHHHHHHHHc-Cceec----------cC-----
Q 012138 356 ELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-------LPVSAYDICLKMKER-GILAK----------PT----- 412 (470)
Q Consensus 356 ~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~l~~~-Gv~~~----------~~----- 412 (470)
+|.+.|.+. .+..+. .|....+ ++... ....++.++-+|... ||-.. |.
T Consensus 336 yl~~~L~~~------Gvpi~~-~Gghav~-iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~ 407 (467)
T TIGR02617 336 YLVNGLEEI------GVVCQQ-AGGHAAF-VDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQL 407 (467)
T ss_pred HHHHHHHhC------CCcEEe-cCccEEE-EehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccC
Confidence 888888774 333344 3433332 22111 023567787777655 76521 10
Q ss_pred --CCCEEEEecCC-CCCHHHHHHHHHHHHHHHhcccCCCCC
Q 012138 413 --HDTIVRLTPPL-SISSNELQEGSKALHDVLELDLPKMRK 450 (470)
Q Consensus 413 --~~~~iR~~~~~-~~t~e~i~~~~~~l~~~l~~~~~~~~~ 450 (470)
.-..+|+++|. +.|.+++|..+++|..+.+ +...+.-
T Consensus 408 ~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~-~~~~i~g 447 (467)
T TIGR02617 408 PCPAELLRLTIPRATYTQTHMDFIIEAFKHVKE-NAPNIKG 447 (467)
T ss_pred CCccceeeeccccccccHhHHHHHHHHHHHHHh-hhhhcCC
Confidence 02679998764 5699999999999999988 6555443
No 360
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.33 E-value=4.2e-10 Score=106.31 Aligned_cols=273 Identities=14% Similarity=0.177 Sum_probs=162.4
Q ss_pred EEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHH
Q 012138 135 VLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITAL 214 (470)
Q Consensus 135 v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~L 214 (470)
-+-|.|||-|+..+.+.+.++ -++..|-+.+|++.-+.......+.. .. .|.-+......+ |.+.+
T Consensus 97 t~Qt~GGTGAL~~~A~fl~~~--------~~~~~vwis~PtW~NH~~If~~aGl~-v~--~Y~Yyd~~~~~~---df~~m 162 (396)
T COG1448 97 TVQTLGGTGALRVAADFLARF--------FPDATVWISDPTWPNHKAIFEAAGLE-VE--TYPYYDAETKGL---DFDGM 162 (396)
T ss_pred heecCCcchHHHHHHHHHHHh--------CCCceEEeCCCCcHhHHHHHHhcCCc-ee--eeeccccccccc---cHHHH
Confidence 466789999999999877664 24446777888873222111111111 00 001111122223 67777
Q ss_pred HHHHHhcCCCeEEEEEcc-ccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCC------Ccc
Q 012138 215 EKIFKESGDQIAGFLFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV------RPD 287 (470)
Q Consensus 215 e~~l~~~~~~~~~vi~ep-i~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~------~pd 287 (470)
-+.|++.+.+. +|++.+ .|||||.-+ +.+.+++|.++.++.|.+-++|=+|.||+... .-+.+++ .+.
T Consensus 163 la~L~~a~~~~-vvLLH~CcHNPTG~D~-t~~qW~~l~~~~~~r~lip~~D~AYQGF~~Gl---eeDa~~lR~~a~~~~~ 237 (396)
T COG1448 163 LADLKTAPEGS-VVLLHGCCHNPTGIDP-TEEQWQELADLIKERGLIPFFDIAYQGFADGL---EEDAYALRLFAEVGPE 237 (396)
T ss_pred HHHHHhCCCCC-EEEEecCCCCCCCCCC-CHHHHHHHHHHHHHcCCeeeeehhhhhhccch---HHHHHHHHHHHHhCCc
Confidence 66776654443 455554 899999998 99999999999999999999999999996431 1121111 222
Q ss_pred e-e--ecccccc-CCCcceeEEE---ecHHHHhhcCc---CCccCCCCCCHH-HHHHHHHHHHH--H----h-h-hhHHH
Q 012138 288 M-V--ILGKALG-GGVIPVSAVL---ADKEVMLCIQP---GEHGSTFGGNPL-ASAVAIASLDV--I----R-D-EKLAE 348 (470)
Q Consensus 288 i-~--s~sK~l~-gG~~~ig~v~---~~~~~~~~~~~---~~~~~t~~~~~~-~~aaa~a~l~~--~----~-~-~~~~~ 348 (470)
+ + ||||.+| =|- |+|+.. -+++..+.+.. ...-++|+.+|- +++.....|+- + + + +.+++
T Consensus 238 ~lva~S~SKnfgLYgE-RVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~ 316 (396)
T COG1448 238 LLVASSFSKNFGLYGE-RVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQ 316 (396)
T ss_pred EEEEehhhhhhhhhhh-ccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 3 2 8899998 344 666644 34555444422 123345654443 33333333321 1 1 1 55777
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHc-CceeccCCCCEEEEecCCCCCH
Q 012138 349 RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPTHDTIVRLTPPLSISS 427 (470)
Q Consensus 349 ~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~~~iR~~~~~~~t~ 427 (470)
++.+++..|.+.|++..... -+..+..+-.|+.. .. .+...+ .+|+++ ||++...+ |+++. ..++
T Consensus 317 Ri~~mR~~lv~~L~~~~~~~--~f~~i~~Q~GMFsy-~G-----ls~~QV-~rLree~~IY~v~sG----Ri~va-Gl~~ 382 (396)
T COG1448 317 RILEMRQALVDALKALGAPR--NFDFIISQRGMFSY-TG-----LSPEQV-DRLREEFGIYLVASG----RINVA-GLNT 382 (396)
T ss_pred HHHHHHHHHHHHHHhhCCCc--ccchHhhcCceeec-CC-----CCHHHH-HHHHHhccEEEecCC----eeeec-cCCh
Confidence 78888888888887754331 23333344444444 12 244444 455554 99987654 77764 5788
Q ss_pred HHHHHHHHHHHHHH
Q 012138 428 NELQEGSKALHDVL 441 (470)
Q Consensus 428 e~i~~~~~~l~~~l 441 (470)
.+|+.+++.|.+++
T Consensus 383 ~ni~~va~ai~~v~ 396 (396)
T COG1448 383 SNIDYVAKAIAAVL 396 (396)
T ss_pred hhHHHHHHHHHhhC
Confidence 89999999998763
No 361
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.32 E-value=6.9e-12 Score=119.06 Aligned_cols=198 Identities=21% Similarity=0.225 Sum_probs=119.7
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEE
Q 012138 92 CHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVS 171 (470)
Q Consensus 92 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~ 171 (470)
.+|++.+++.+... +.. .....+...++++++++++|.+.++|+.|||.||..+++...+ +++ .||+
T Consensus 7 ~~~~m~~a~~~a~~--gd~-~Yg~D~~~~~l~~~i~~l~g~e~a~f~~sGT~An~~al~~~~~---------~~~-~vi~ 73 (290)
T PF01212_consen 7 PTPAMLEAMAAANV--GDD-AYGEDPTTARLEERIAELFGKEAALFVPSGTMANQLALRAHLR---------PGE-SVIC 73 (290)
T ss_dssp S-HHEEHHHHHTTS--B-C-CTTSSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHHHH---------TTE-EEEE
T ss_pred CCHHHHHHHHcccc--CCc-ccCCChhHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHHh---------cCC-ceec
Confidence 68999999844331 111 1123456789999999999999999999999999999998775 454 5555
Q ss_pred EccC-ccccccchh-cccCCcccccCCCCCCCCe-eeecCCCHHHHHHHHHhc---CCCeEEEEEccccCC-CccccCCh
Q 012138 172 CCGC-FHGRTLAAI-SMSCDNEAIRGFGPLLPGH-LKVDFGDITALEKIFKES---GDQIAGFLFEPIQGE-AGVIIPPD 244 (470)
Q Consensus 172 ~~~~-yhg~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~Le~~l~~~---~~~~~~vi~epi~n~-~G~~~~~~ 244 (470)
...+ .+....++. .+++..... +.... ..+ |+++|++.+... ..++++|.+|..++. +|.++ +.
T Consensus 74 ~~~aHi~~~E~ga~~~~~G~~~~~-----l~~~~~G~l---~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~-s~ 144 (290)
T PF01212_consen 74 ADTAHIHFDETGAIEELSGAKLIP-----LPSDDDGKL---TPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVY-SL 144 (290)
T ss_dssp ETTEHHHHSSTTHHHHHTTCEEEE-----EBECTGTBB----HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB----H
T ss_pred cccceeeeeccchhhHhcCcEEEE-----CCCcccCCC---CHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeC-CH
Confidence 4443 222333332 223321110 00000 122 899999999884 347899998885664 58888 99
Q ss_pred hhHHHHHHHHHhcCcEEEEeccccC--CcccCCccccccCCCCcceeeccccccCCCcceeEEE-ecHHHHhh
Q 012138 245 GYLKAVRDLCSKYNILMIADEIQSG--LARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVL-ADKEVMLC 314 (470)
Q Consensus 245 ~~l~~l~~l~~~~gillI~Dev~~g--~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~-~~~~~~~~ 314 (470)
+++++|.++|++||+.|+.|-+.-. ....|... -+.. --.|+++||-+-++|. +.|.++ +++++++.
T Consensus 145 ~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~-~e~~-~~~D~v~~~~tK~~g~-~~Gavl~~~~~~i~~ 214 (290)
T PF01212_consen 145 EELRAISELAREHGLPLHMDGARLANAAAALGVSL-AEIA-AGADSVSFGGTKNGGA-PGGAVLAGNKEFIAK 214 (290)
T ss_dssp HHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHH-HHHH-TTSSEEEEETTSTT-S-SSEEEEEESHHHHHH
T ss_pred HHHHHHHHHHHhCceEEEEehhhHHHhhhcccccH-HHHh-hhCCEEEEEEEccccc-ccceEEEechHHHHH
Confidence 9999999999999999999977431 00011111 1111 1248876664444454 555554 78885543
No 362
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.31 E-value=6.8e-10 Score=108.00 Aligned_cols=320 Identities=16% Similarity=0.149 Sum_probs=188.2
Q ss_pred EEeccCCcccccCCCCCHHHHHHHHHHHHHcccc-------CCC--CCCCcHHHHHHHHhhhhCC-C--eE-EecCChhH
Q 012138 77 YLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLS-------SRA--FYNDKFPVFAERLTSMFGY-D--MV-LPMNTGAE 143 (470)
Q Consensus 77 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~-------~~~--~~~~~~~~l~~~l~~~~~~-~--~v-~~~~sGte 143 (470)
.++|+.|...+ |++|.+++.+.+-.+... +.. -..+...+..+.|.++++. + +| ++..|||.
T Consensus 5 ~~nF~aGPa~l-----p~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~ 79 (364)
T PRK12462 5 QLNFSGGPGAL-----PDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSL 79 (364)
T ss_pred cceecCCCcCC-----CHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHH
Confidence 34677775553 589999988877553221 000 0134456677778888864 2 35 55566999
Q ss_pred HHHHHHHHHHHhchhcccCCCCCcEE-EEEccCccccccch-hcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhc
Q 012138 144 GVETALKLARKWGYVKKKFSIDEAII-VSCCGCFHGRTLAA-ISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKES 221 (470)
Q Consensus 144 A~~~al~~~~~~~~~~~~~~~g~~~i-i~~~~~yhg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~ 221 (470)
+.++++..+.. ++++.+ .+..+.| |....- ...-++ ..........+...+| ++++++ +.
T Consensus 80 ~~ea~~~Nll~---------~g~~~~~~~~tG~f-g~r~~~ea~~~g~--v~~~~~~~~~~~~~~p--~~~~~~--~~-- 141 (364)
T PRK12462 80 QFSMIPMNFSR---------PGAAAPEYVTTGYW-SRKAIGEASRVAA--MRVVWDGAASGYRTLP--SLAELD--WD-- 141 (364)
T ss_pred HHHHHHHHcCC---------CCCcEEEEEeCCHH-HHHHHHHHHhcCC--ceEecCcCCCCCCcCC--CHHHhc--cC--
Confidence 99999887754 455344 3455544 322211 111111 0000000000001111 445441 11
Q ss_pred CCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecc--ccccCCC
Q 012138 222 GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGGGV 299 (470)
Q Consensus 222 ~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~s--K~l~gG~ 299 (470)
.+.+.|.+.+....+|+..| ++.+.+++++|+|-+-+ + .+..+.++.+ |++..| |.++ .-
T Consensus 142 -~d~~~v~~t~NETstGv~~~---------~~~~~~~~llvvD~sS~-~--~s~pid~~~~----dvi~agsQKnlg-P~ 203 (364)
T PRK12462 142 -ARAPFRHYVSNETVEGLQFP---------DAAGLPDSPLIADMSSD-F--MSRPFDVEAY----GMVYAHAQKNLG-PA 203 (364)
T ss_pred -CCCcEEEEccCCCCceEecC---------cccccCCCeEEEEcCch-h--hCCCCChHHc----cEEEeeccccCC-CC
Confidence 24566666664556898884 34444799999998765 2 2333444444 666444 9998 33
Q ss_pred cceeEEEecHHHHhhcCcC-----------CccCCC-CCCHHHHHHHHHHHHHHhhh-----hHHHHHHHHHHHHHHHHH
Q 012138 300 IPVSAVLADKEVMLCIQPG-----------EHGSTF-GGNPLASAVAIASLDVIRDE-----KLAERSAHLGEELRQHLF 362 (470)
Q Consensus 300 ~~ig~v~~~~~~~~~~~~~-----------~~~~t~-~~~~~~~aaa~a~l~~~~~~-----~~~~~~~~~~~~l~~~L~ 362 (470)
.++.++.+++.++..... ...+++ +++.....++..+|+++.++ .+.++.+++++.+++.+.
T Consensus 204 -Gltvvivs~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id 282 (364)
T PRK12462 204 -GVTVAIIRRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLD 282 (364)
T ss_pred -ceEEEEECHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHH
Confidence 667888999888765431 123444 56677888888999998765 455666667777777777
Q ss_pred HHHhhCCCceEEEeccceeEEE-EeccCCCchhHHHHHHHHHHcCceeccCC--CCEEEEecCCCCCHHHHHHHHHHHHH
Q 012138 363 KIQQQFPNYVKEVRGRGLFNAV-EFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHD 439 (470)
Q Consensus 363 ~l~~~~p~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~--~~~iR~~~~~~~t~e~i~~~~~~l~~ 439 (470)
+...-+. .......+..+... .+..+ ....+|.+.+.++|+.-..|+ -+.+|.+.--.++.|.++.+++-+++
T Consensus 283 ~~~~~~~-~~~~~~~RS~mnv~f~~~~~---~l~~~f~~~a~~~gl~~lkGhr~vgg~Ras~yna~~~e~v~~L~~fm~~ 358 (364)
T PRK12462 283 ALNEVID-CHAHRAARSTMNVAFRFRQP---RLDTLFKEQSTEAGFCGLSGHRSIGGIRASLYNAVSEQAVSRLCAFLKD 358 (364)
T ss_pred hCCCccc-CCCChhhcCcceEEEEcCCH---HHHHHHHHHHHHCCCccccCCcccCceEEEcCCCCCHHHHHHHHHHHHH
Confidence 6532221 11122223333332 22322 357789999999999876654 35699998888999999999999988
Q ss_pred HHh
Q 012138 440 VLE 442 (470)
Q Consensus 440 ~l~ 442 (470)
+-+
T Consensus 359 f~~ 361 (364)
T PRK12462 359 FAI 361 (364)
T ss_pred HHH
Confidence 765
No 363
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.31 E-value=2.5e-10 Score=113.21 Aligned_cols=311 Identities=17% Similarity=0.200 Sum_probs=201.6
Q ss_pred CCcHHHHHHHHhhhhCCCeEEec-CChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCccccc
Q 012138 116 NDKFPVFAERLTSMFGYDMVLPM-NTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIR 194 (470)
Q Consensus 116 ~~~~~~l~~~l~~~~~~~~v~~~-~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~ 194 (470)
..+..+|+++|+++.|.|.+.|- |||.++-.+-++.+|.|... +| .+...|....-+.||.......+.+-...-.
T Consensus 581 ~~lf~~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~-kg--e~hRnvClIPvSAHGTNPASA~MagmkvvpV 657 (1001)
T KOG2040|consen 581 QQLFTELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLES-KG--EGHRNVCLIPVSAHGTNPASAAMAGMKVVPV 657 (1001)
T ss_pred HHHHHHHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHh-cc--CCcceeEEEeecccCCChhhHHhcCCEEEEe
Confidence 34467899999999999987655 78998888888888876332 33 4555676666677998766655554321100
Q ss_pred CCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecc----ccCC
Q 012138 195 GFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI----QSGL 270 (470)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev----~~g~ 270 (470)
..+. ...+ |+.+|+++.+++.++.+++++.. .+..|..-+ -++++.++.++||--+..|.+ |.|+
T Consensus 658 ---~~~~-~G~i---d~~dLk~kaekh~~~Laa~MvTY-PST~GvfE~---~i~d~cd~iHehGGQVYlDGANMNAqVGl 726 (1001)
T KOG2040|consen 658 ---GCDA-NGNI---DMVDLKAKAEKHKDNLAALMVTY-PSTHGVFEE---GIDDICDIIHEHGGQVYLDGANMNAQVGL 726 (1001)
T ss_pred ---eccC-CCCc---cHHHHHHHHHHhhhhhheeEEec-ccccccccc---cHHHHHHHHHhcCCEEEecCCCccceecc
Confidence 0000 0111 78999999998888999999887 555676543 388999999999999999964 5577
Q ss_pred cccCCcc-ccccCCCCcceeecccccc-CCCcceeEEEecHHHHhhcCcCC--------cc---CCC----CCCHHHHHH
Q 012138 271 ARSGRML-ASDWEEVRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGE--------HG---STF----GGNPLASAV 333 (470)
Q Consensus 271 g~~G~~~-~~~~~~~~pdi~s~sK~l~-gG~~~ig~v~~~~~~~~~~~~~~--------~~---~t~----~~~~~~~aa 333 (470)
.+.|... ...|.++. -+|+-.-| ||. .+|-|.+.+.++..+.... .. ++. -++......
T Consensus 727 c~pGd~GaDV~HLNLH---KTFcIPHGGGGP-g~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpI 802 (1001)
T KOG2040|consen 727 CRPGDIGADVCHLNLH---KTFCIPHGGGGP-GMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPI 802 (1001)
T ss_pred cCCccccccceeeccc---ceeeecCCCCCC-CCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcceeehh
Confidence 7777553 23334332 13333333 444 5566666776666553210 00 011 144455566
Q ss_pred HHHHHHHHhhhhHHH---HHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccC--CC----chhHHHHHHHHHH
Q 012138 334 AIASLDVIRDEKLAE---RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKT--AL----PVSAYDICLKMKE 404 (470)
Q Consensus 334 a~a~l~~~~~~~~~~---~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~--~~----~~~~~~~~~~l~~ 404 (470)
.++.+++|....+.+ -+..+++++.++|+.. |+ .+ .++.-..++-+|..+ +. +..+.+++++|.+
T Consensus 803 SwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h---Yk-il--~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~D 876 (1001)
T KOG2040|consen 803 SWAYIKMMGSGGLKDASKIAILNANYMAKRLESH---YK-IL--FRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLMD 876 (1001)
T ss_pred HHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc---cc-ee--EecCCcceeeeeeeechhhccccCCcHHHHHHHHHh
Confidence 778888887644433 3445778888888763 22 11 123323455444221 11 4678899999999
Q ss_pred cCceeccC---CCCEEEEecCCCCCHHHHHHHHHHHHHHHhcccCCCCCC
Q 012138 405 RGILAKPT---HDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRKP 451 (470)
Q Consensus 405 ~Gv~~~~~---~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~~~~~ 451 (470)
.|+....- -.+.+.+-|.-.-+.+|+|++++++-.+-+ |++++.+.
T Consensus 877 YgFHaPTmswPV~gtLMIEPTESE~k~ElDRfcdAliSIre-EI~~ie~G 925 (1001)
T KOG2040|consen 877 YGFHAPTMSWPVAGTLMIEPTESEDKAELDRFCDALISIRE-EIAQIEEG 925 (1001)
T ss_pred ccCCCCccccccCCceEeccCccccHHHHHHHHHHHHHHHH-HHHHHHcc
Confidence 99986432 267899999988999999999999988877 77665554
No 364
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.29 E-value=3.2e-10 Score=111.48 Aligned_cols=304 Identities=15% Similarity=0.156 Sum_probs=174.7
Q ss_pred CHH-HHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCC--C--eEEecCChhHHHHHHHHHHHHhchhcccCCCCCc
Q 012138 93 HPK-IMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGY--D--MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEA 167 (470)
Q Consensus 93 ~p~-v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~--~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~ 167 (470)
+|. ..+++.+.+-...|.+.. ..+...++.+.|.++++. + -++++.|||.++|+++..+..- +++
T Consensus 15 ~~~~~~~~~~~~~~~~~HRs~~-F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~--------~g~- 84 (374)
T TIGR01365 15 RPGWSIEELKNAPLGRSHRSKL-GKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGC--------RGV- 84 (374)
T ss_pred CchhhHHHHhhhhcccCcCCHH-HHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCC--------CCC-
Confidence 455 455555433222222111 234456677778887764 2 3677999999999999977520 344
Q ss_pred EEEEEccCccccc-c-chhcccCCcccccCCCCCCCCeeeecCC---CHHHHHHHHHhcCCCeEEEEEccccCCCccccC
Q 012138 168 IIVSCCGCFHGRT-L-AAISMSCDNEAIRGFGPLLPGHLKVDFG---DITALEKIFKESGDQIAGFLFEPIQGEAGVIIP 242 (470)
Q Consensus 168 ~ii~~~~~yhg~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~ 242 (470)
.+++. +.| |.. . .....-+.+.. .....+++ ++++++. ++ . |.+...-..||+..|
T Consensus 85 ~vLv~-g~F-G~r~~~eia~~~g~~~v---------~~l~~~~g~~~~~~~ve~--~~---~---v~~vhnETSTGv~np 145 (374)
T TIGR01365 85 DVLAW-ESF-GKGWVTDVTKQLKLPDV---------RVLEAEYGKLPDLKKVDF--KN---D---VVFTWNGTTSGVRVP 145 (374)
T ss_pred eEEEE-CHH-HHHHHHHHHHhcCCCCc---------EEEcCCCCCCCCHHHcCC--CC---C---EEEecCCCchheecc
Confidence 44443 344 333 2 22111111100 01122222 6777762 11 2 333332456899997
Q ss_pred ChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecc--ccccCCCcceeEEEecHHHHhhcCcC--
Q 012138 243 PDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPG-- 318 (470)
Q Consensus 243 ~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~s--K~l~gG~~~ig~v~~~~~~~~~~~~~-- 318 (470)
++++...+ +++++|+|.+-+ +| +..+..+ + .|++..| |++++.- .++.++.+++.++.....
T Consensus 146 ----v~~i~~~~--~~~lliVDavSs-~g--~~~l~~d--~--iDv~~tgsQK~L~~pp-Gls~v~vs~~Al~~~~~~~~ 211 (374)
T TIGR01365 146 ----NGDFIPAD--REGLTICDATSA-AF--AQDLDYH--K--LDVVTFSWQKVLGGEG-AHGMLILSPRAVARLESYTP 211 (374)
T ss_pred ----cccccccc--CCCcEEEEccch-hc--CCCCChh--H--CcEEEEechhccCCCC-ceEEEEECHHHHHHHhhcCC
Confidence 65444222 589999998876 32 3333333 2 4766444 9999543 567888888877654310
Q ss_pred ---------------------CccCCCCCCHHHHHHHHHHHHHHhh----hhHHHHHHHHHHHHHHHHHHHH-hhCCCce
Q 012138 319 ---------------------EHGSTFGGNPLASAVAIASLDVIRD----EKLAERSAHLGEELRQHLFKIQ-QQFPNYV 372 (470)
Q Consensus 319 ---------------------~~~~t~~~~~~~~aaa~a~l~~~~~----~~~~~~~~~~~~~l~~~L~~l~-~~~p~~~ 372 (470)
...+.++++.....++..+|+++++ ++..++.+++++.+++.+++++ ..+ ..
T Consensus 212 y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~--~~ 289 (374)
T TIGR01365 212 AWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHF--LA 289 (374)
T ss_pred CCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCccc--CC
Confidence 0112233455566666667776554 3566777788888888888875 221 11
Q ss_pred E--EEeccceeEEEEeccCCC---chh-----HHHHHHHHHHcCceeccCC----CCEEEEecCCCCCHHHHHHHHHHHH
Q 012138 373 K--EVRGRGLFNAVEFDKTAL---PVS-----AYDICLKMKERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALH 438 (470)
Q Consensus 373 ~--~~~~~g~~~~~~~~~~~~---~~~-----~~~~~~~l~~~Gv~~~~~~----~~~iR~~~~~~~t~e~i~~~~~~l~ 438 (470)
. ..++ .....+.+..+.. ..+ ..++.+.|+++||.+.++. ++.+||...-.++.++++.+++.|+
T Consensus 290 ~~~~~rS-~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~ 368 (374)
T TIGR01365 290 ETPEIRS-NTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLD 368 (374)
T ss_pred CChhhcC-CCeEEEEeCCccccccccchhhHHHHHHHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHH
Confidence 1 1222 2233343422210 002 5789999999999888653 5889998888899999999999998
Q ss_pred HHHh
Q 012138 439 DVLE 442 (470)
Q Consensus 439 ~~l~ 442 (470)
=+.+
T Consensus 369 ~~~~ 372 (374)
T TIGR01365 369 WAFA 372 (374)
T ss_pred HHHh
Confidence 6654
No 365
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.28 E-value=4.7e-10 Score=117.11 Aligned_cols=308 Identities=12% Similarity=0.059 Sum_probs=176.8
Q ss_pred CCcHHHHHHHHhhhhCCCeE-EecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccch-hcccCC-ccc
Q 012138 116 NDKFPVFAERLTSMFGYDMV-LPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAA-ISMSCD-NEA 192 (470)
Q Consensus 116 ~~~~~~l~~~l~~~~~~~~v-~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~-~~~~~~-~~~ 192 (470)
.....+.++..++.+|.++. +++||.|.+|.+++.++.. +|+ .|++..++ |-+...+ +.+++. |.|
T Consensus 173 eG~i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~~---------~Gd-~VLvdRN~-HKSv~hgaLiLsGa~PVY 241 (720)
T PRK13578 173 EGAAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALLT---------PGD-LVLFDRNN-HKSNHHGALIQAGATPVY 241 (720)
T ss_pred ChHHHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhcC---------CCC-EEEeeccc-HHHHHHHHHHHcCCeEEE
Confidence 44567788888899999875 5557777778777776654 455 77777666 8887764 665553 444
Q ss_pred ccCCCCCCCC-eeeecCC--CHHHHHHHHHhcC-C------CeEEEEEccccCCCccccCChhhHHHHHHH-HHhcCcEE
Q 012138 193 IRGFGPLLPG-HLKVDFG--DITALEKIFKESG-D------QIAGFLFEPIQGEAGVIIPPDGYLKAVRDL-CSKYNILM 261 (470)
Q Consensus 193 ~~~~~~~~~~-~~~~~~~--d~~~Le~~l~~~~-~------~~~~vi~epi~n~~G~~~~~~~~l~~l~~l-~~~~gill 261 (470)
..+-..- -+ ...++.. +.+.++++|++++ + ..+++++.. .+-.|.+++ +++|.++ |++++ .|
T Consensus 242 l~P~~n~-~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~-pTYdG~~yd----i~~I~~~~~h~~~-~l 314 (720)
T PRK13578 242 LETARNP-FGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQL-GTYDGTIYN----ARQVVDKIGHLCD-YI 314 (720)
T ss_pred eeccccc-cCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEEC-CCCcceeec----HHHHHHHhhccCC-cE
Confidence 2211100 00 0112111 3677999998762 2 156666554 455799998 9999998 78888 99
Q ss_pred EEeccccCCcccCCc---cccccCCCCcc----eeecc--ccccCCCcceeEEEecHHHH---------hhcCc-CCccC
Q 012138 262 IADEIQSGLARSGRM---LASDWEEVRPD----MVILG--KALGGGVIPVSAVLADKEVM---------LCIQP-GEHGS 322 (470)
Q Consensus 262 I~Dev~~g~g~~G~~---~~~~~~~~~pd----i~s~s--K~l~gG~~~ig~v~~~~~~~---------~~~~~-~~~~~ 322 (470)
++||+|.+.-.-... +.-......+| +++-| |.+++ +...+++-.+...+ +.+.. .....
T Consensus 315 lvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~a-lTQaS~LHvk~~~i~g~~~~v~~~r~~~al~m~q 393 (720)
T PRK13578 315 LFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAG-FSQTSQIHKKDNHIKGQARYCPHKRLNNAFMLHA 393 (720)
T ss_pred EEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchh-hhhHhhhhcCCcccccccccCCHHHHHHHHHHHc
Confidence 999999863211121 11111223445 55444 76652 21222333322211 11211 12233
Q ss_pred CCCCCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCce-EEE-----------------------
Q 012138 323 TFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYV-KEV----------------------- 375 (470)
Q Consensus 323 t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~p~~~-~~~----------------------- 375 (470)
|-+++-+.+|..-.+-..++. ..+.+...+.+..+++.|.+....+-.+. ..+
T Consensus 394 STSPsY~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w~~~ 473 (720)
T PRK13578 394 STSPFYPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSFE 473 (720)
T ss_pred CCChHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhcccccccccc
Confidence 445566666665555555543 45677777777778877732211110000 000
Q ss_pred ecc---c-------ee------EEEEec-cC-C------CchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHH
Q 012138 376 RGR---G-------LF------NAVEFD-KT-A------LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQ 431 (470)
Q Consensus 376 ~~~---g-------~~------~~~~~~-~~-~------~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~ 431 (470)
++. | .+ +.+... .+ . .+..+..+.+.|+++||.+--.+.+.+-|.++...|+++++
T Consensus 474 p~~~whgf~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~~~~ 553 (720)
T PRK13578 474 PGEKWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIPATILANYLRENGIVPEKCDLNSILFLLTPAEDMAKLQ 553 (720)
T ss_pred cCccccccccccccccccCCceEEEEcCCcCcccccccccCccHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHH
Confidence 000 0 00 001010 00 0 02236889999989999998888888888888899999999
Q ss_pred HHHHHHHHHHh
Q 012138 432 EGSKALHDVLE 442 (470)
Q Consensus 432 ~~~~~l~~~l~ 442 (470)
.++++|.++-+
T Consensus 554 ~Lv~aL~~f~~ 564 (720)
T PRK13578 554 QLVAMLARFEK 564 (720)
T ss_pred HHHHHHHHHHH
Confidence 99999998755
No 366
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.27 E-value=2.2e-09 Score=112.05 Aligned_cols=305 Identities=11% Similarity=0.049 Sum_probs=180.7
Q ss_pred CCcHHHHHHHHhhhhCCCeEEe-cCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCC-cccc
Q 012138 116 NDKFPVFAERLTSMFGYDMVLP-MNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD-NEAI 193 (470)
Q Consensus 116 ~~~~~~l~~~l~~~~~~~~v~~-~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~-~~~~ 193 (470)
.-...+.++..++.+|.++.+| +||.|.+|.+++.++.. +|+ .|++..++ |-+...++.+++. |.|.
T Consensus 194 ~G~i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~~~---------~Gd-~VLvdRN~-HKSv~~aLilsga~PVYl 262 (713)
T PRK15399 194 TGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAP---------AGS-TLLIDRNC-HKSLAHLLMMSDVVPIWL 262 (713)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHhcC---------CCC-EEEeeccc-HHHHHHHHHHcCCeeEEe
Confidence 3446677888888999988655 56667778777776654 455 77766666 9888888777764 3332
Q ss_pred cCCCCCCCC-eeeecCC--CHHHHHHHHHhcCCC--eEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEE-EEeccc
Q 012138 194 RGFGPLLPG-HLKVDFG--DITALEKIFKESGDQ--IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILM-IADEIQ 267 (470)
Q Consensus 194 ~~~~~~~~~-~~~~~~~--d~~~Le~~l~~~~~~--~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gill-I~Dev~ 267 (470)
.+-..- -+ ...++.. +.+.++++++++++. ++++++.. .+-.|.+++ +++|.++| |+.+ ++||+|
T Consensus 263 ~P~~n~-~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~-pTYdGi~yd----~~~I~~~~---g~~~ilvDEAh 333 (713)
T PRK15399 263 KPTRNA-LGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITN-STYDGLLYN----TDWIKQTL---DVPSIHFDSAW 333 (713)
T ss_pred cccccc-cCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEEC-CCCCceeeC----HHHHHHHh---CCCEEEEeccc
Confidence 211100 00 0111100 459999999887532 23444433 255799998 89999988 6666 699999
Q ss_pred cCCcccCCc----cccccCCCCccee-----eccccccCCCcceeEEEecHHHH-hhcCc-CCccCCCCCCHHHHHHHHH
Q 012138 268 SGLARSGRM----LASDWEEVRPDMV-----ILGKALGGGVIPVSAVLADKEVM-LCIQP-GEHGSTFGGNPLASAVAIA 336 (470)
Q Consensus 268 ~g~g~~G~~----~~~~~~~~~pdi~-----s~sK~l~gG~~~ig~v~~~~~~~-~~~~~-~~~~~t~~~~~~~~aaa~a 336 (470)
.++-.-.+. .+.. .+-.+|.+ |.-|.+++ +...+++-.+..+- +.+.. .....|-+++-+.+|..-.
T Consensus 334 gah~~F~p~~~~~sam~-~~~~aD~~i~~tQStHKtL~a-lTQaS~iHvk~~vd~~~~n~a~~m~~STSPsY~LmASLD~ 411 (713)
T PRK15399 334 VPYTHFHPIYQGKSGMS-GERVPGKVIFETQSTHKMLAA-FSQASLIHIKGEYDEETFNEAFMMHTSTSPSYPIVASVET 411 (713)
T ss_pred hhhhhcCcccCCcChhh-CCCCCCeeeeeeeehhccccc-cchheeeeecCCCCHHHHHHHHHHHcCCCcHHHHHHHHHH
Confidence 963221121 1121 11134655 44477663 21333343322211 11111 1233444566777777777
Q ss_pred HHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCc-eEEEecc-----------------c-------------eeE
Q 012138 337 SLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNY-VKEVRGR-----------------G-------------LFN 382 (470)
Q Consensus 337 ~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~p~~-~~~~~~~-----------------g-------------~~~ 382 (470)
+..+++. ..+.+...+.+..+++.|.++.....++ +....+. | .=+
T Consensus 412 a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~Kl 491 (713)
T PRK15399 412 AAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKV 491 (713)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceE
Confidence 7676763 4577788888888888887754311111 1111100 0 000
Q ss_pred EEEecc---C----CCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 383 AVEFDK---T----ALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 383 ~~~~~~---~----~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
.+.... . ..+..+..+.+.|.++||.+--.+.+.+-|.++...|+++++.+++.|.++-+
T Consensus 492 tI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~~~~~L~~aL~~f~~ 558 (713)
T PRK15399 492 TILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMGLLRGLTEFKR 558 (713)
T ss_pred EEEecCcccccccccCCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 111110 0 11456788999999999999888888888888899999999999999987744
No 367
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.26 E-value=2e-09 Score=112.42 Aligned_cols=302 Identities=11% Similarity=0.048 Sum_probs=180.0
Q ss_pred CCcHHHHHHHHhhhhCCCeEEe-cCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCC-cccc
Q 012138 116 NDKFPVFAERLTSMFGYDMVLP-MNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD-NEAI 193 (470)
Q Consensus 116 ~~~~~~l~~~l~~~~~~~~v~~-~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~-~~~~ 193 (470)
.....+.++..++.+|.++.+| +||.|.+|.+++.++.. +|+ .|++..++ |-+...++.+++. |.|.
T Consensus 194 ~G~i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~~~---------~Gd-~VLvdRN~-HKSv~haLilsga~PVYl 262 (714)
T PRK15400 194 SGPHKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYSAP---------AGS-TVLIDRNC-HKSLTHLMMMSDVTPIYF 262 (714)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHhcC---------CCC-EEEeeccc-HHHHHHHHHHcCCeEEEe
Confidence 3446778888889999988655 46667777777776654 455 77766666 9988888777764 4332
Q ss_pred cCCCCCCCC-eeeecCC--CHHHHHHHHHhcCCCe---EEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccc
Q 012138 194 RGFGPLLPG-HLKVDFG--DITALEKIFKESGDQI---AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 267 (470)
Q Consensus 194 ~~~~~~~~~-~~~~~~~--d~~~Le~~l~~~~~~~---~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~ 267 (470)
.+-..- -+ ...++.. +.+.++++++++++.. .+|+.+| +-.|.+++ ++.|.++|+.++ |++||+|
T Consensus 263 ~P~rn~-~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~p--TYdG~~yd----~~~I~~~~~~~~--ilvDEAw 333 (714)
T PRK15400 263 RPTRNA-YGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS--TYDGLLYN----TDFIKKTLDVKS--IHFDSAW 333 (714)
T ss_pred cccccc-cCCccCCCccccCHHHHHHHHHhCccccCccEEEEECC--CCccEecC----HHHHHHHhCCCC--EEEEccc
Confidence 211100 00 0111100 4899999998865321 3455555 55799998 999999999888 6899999
Q ss_pred cCCcccCCcc----ccccCCCCc-c--ee--eccccccCCCcceeEEEe----c-HHHHhhcCcCCccCCCCCCHHHHHH
Q 012138 268 SGLARSGRML----ASDWEEVRP-D--MV--ILGKALGGGVIPVSAVLA----D-KEVMLCIQPGEHGSTFGGNPLASAV 333 (470)
Q Consensus 268 ~g~g~~G~~~----~~~~~~~~p-d--i~--s~sK~l~gG~~~ig~v~~----~-~~~~~~~~~~~~~~t~~~~~~~~aa 333 (470)
.++-.-...+ +.. .+-.+ | ++ |.-|.+++ +...+++-. + +.+.+.+ ....|-+++-+.+|.
T Consensus 334 gah~~F~p~~~~~sam~-~ga~~~~~i~vtQStHKtL~a-lTQaS~LHvkg~vd~~~~n~a~---~m~~STSPsY~l~AS 408 (714)
T PRK15400 334 VPYTNFSPIYEGKCGMS-GGRVEGKVIYETQSTHKLLAA-FSQASMIHVKGDVNEETFNEAY---MMHTTTSPHYGIVAS 408 (714)
T ss_pred hhhhccCcccCCcChhh-cCCCCCCceEEEEchhhcccc-hhHHhHHHHcCCCCHHHHHHHH---HHHcCCCcHHHHHHH
Confidence 8632211221 111 12111 3 44 34476652 101111111 1 2222222 233444566777777
Q ss_pred HHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCc-eEEEecc-----------------c--e----------
Q 012138 334 AIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNY-VKEVRGR-----------------G--L---------- 380 (470)
Q Consensus 334 a~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~p~~-~~~~~~~-----------------g--~---------- 380 (470)
.-.+..+++. +.+.+...+.+..+++.|.++.....++ +....+. | .
T Consensus 409 LD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP 488 (714)
T PRK15400 409 TETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDP 488 (714)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCC
Confidence 7777777763 4577778888888888887753210001 1111100 0 0
Q ss_pred -eEEEEecc---C----CCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 381 -FNAVEFDK---T----ALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 381 -~~~~~~~~---~----~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
=+.+.... . ..+..+..+.+.|.++||.+--.+.+.+-|.++...|+++++.+++.|.++-+
T Consensus 489 ~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d~~~iLfl~s~g~t~~~~~~L~~aL~~f~~ 558 (714)
T PRK15400 489 IKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSLLRALTDFKR 558 (714)
T ss_pred ceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 00111100 0 01345778999999999999888888899988899999999999999987744
No 368
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.22 E-value=3.6e-09 Score=115.13 Aligned_cols=272 Identities=14% Similarity=0.082 Sum_probs=161.7
Q ss_pred HHHHHHHhhhhCCC--eEEecCChhHHHHHHHHHHHHhchhcccCCCC-CcEEEEEccCccccccchhccc-CCcccccC
Q 012138 120 PVFAERLTSMFGYD--MVLPMNTGAEGVETALKLARKWGYVKKKFSID-EAIIVSCCGCFHGRTLAAISMS-CDNEAIRG 195 (470)
Q Consensus 120 ~~l~~~l~~~~~~~--~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g-~~~ii~~~~~yhg~~~~~~~~~-~~~~~~~~ 195 (470)
.++...+++++|.+ ++.++.++|.+.++++... ++ . ++ +++|++.+..| ..+...+... ...++
T Consensus 124 ~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~-~~--~-----~~~~~~vlv~~~~h-P~~~~v~~t~a~~~G~--- 191 (954)
T PRK05367 124 LNFQTMVADLTGLEIANASLLDEATAAAEAMALAK-RV--S-----KSKSNRFFVDDDVH-PQTLDVLRTRAEPLGI--- 191 (954)
T ss_pred HHHHHHHHHHHCCChhhccccccHHHHHHHHHHhh-hh--c-----cCCCCEEEEcCccC-HHHHHHHHHHHHhCCC---
Confidence 35667788888876 5788999999998766544 32 1 12 24777777674 4433322111 10111
Q ss_pred CCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCC
Q 012138 196 FGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR 275 (470)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~ 275 (470)
.+..++.++ +++ .+++.++++.. .|.+|.+.| +++|.++|+++|+++++|..+..++..-
T Consensus 192 ------ev~~~~~~~--d~~------~~~~~~vlvq~-p~~~G~i~d----~~~i~~~ah~~Gal~~vda~~~Al~~l~- 251 (954)
T PRK05367 192 ------EVVVGDAAK--ALD------HDDVFGVLLQY-PGTSGEVRD----YTALIAAAHARGALVAVAADLLALTLLT- 251 (954)
T ss_pred ------EEEEecCcc--CCC------cccEEEEEEec-CCCCeeecc----HHHHHHHHHHcCCEEEEEehhhhccCCC-
Confidence 123333322 111 12666665544 678999998 9999999999999999998663221110
Q ss_pred ccccccCCCCcceeecc--cc---cc-CCCcceeEEEecHHHHhhcCcCCcc-------C---C-----------C---C
Q 012138 276 MLASDWEEVRPDMVILG--KA---LG-GGVIPVSAVLADKEVMLCIQPGEHG-------S---T-----------F---G 325 (470)
Q Consensus 276 ~~~~~~~~~~pdi~s~s--K~---l~-gG~~~ig~v~~~~~~~~~~~~~~~~-------~---t-----------~---~ 325 (470)
....+| .|+++.+ |. ++ ||- ..|++.+++++.+.+.+...+ . . + +
T Consensus 252 --~pge~G--aDi~vgs~qkfg~P~g~GGP-~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaT 326 (954)
T PRK05367 252 --PPGEMG--ADIAVGSAQRFGVPMGFGGP-HAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKAT 326 (954)
T ss_pred --ChhhcC--CCEEEeeCcccCCCCCCCCC-CEEEEEECHHHHhhCCCCeeeeecccCCCcccccccccccccccccccc
Confidence 122233 3665432 43 22 565 688899999888776432111 0 0 0 1
Q ss_pred CCHHHH---HHHHH--HHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHH
Q 012138 326 GNPLAS---AVAIA--SLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYD 397 (470)
Q Consensus 326 ~~~~~~---aaa~a--~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 397 (470)
.|.... .++.+ .+.++.. +.+.+++..+..++.++|++.+... ... .....+.+.+ +. ++.+
T Consensus 327 sNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~~---~~~--~~f~~~~~~~--~~---~~~~ 396 (954)
T PRK05367 327 SNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALGLEV---VHD--SFFDTLTVEV--GG---DAAA 396 (954)
T ss_pred cccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCccc---CCC--CCCCeEEEeC--CC---CHHH
Confidence 111111 11111 1233333 4567778888888888886633221 111 1111222322 22 6789
Q ss_pred HHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHH
Q 012138 398 ICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALH 438 (470)
Q Consensus 398 ~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~ 438 (470)
+.++|.++||.+.....+.+|+++....|++||+.+++.|.
T Consensus 397 i~~~l~~~gi~~~~~~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 397 VLARALAAGINLRRVDDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred HHHHHHHCCceeccccCCEEEEEecccCCHHHHHHHHHHHc
Confidence 99999999999866556789999999999999999999997
No 369
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.19 E-value=1.3e-08 Score=110.53 Aligned_cols=300 Identities=13% Similarity=0.102 Sum_probs=173.4
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCC-------cHHHHHHHHhhhhCCC--eEEecCChhHHHHHHHHHHHHhchhcccC
Q 012138 92 CHPKIMKALQEQAEKLTLSSRAFYND-------KFPVFAERLTSMFGYD--MVLPMNTGAEGVETALKLARKWGYVKKKF 162 (470)
Q Consensus 92 ~~p~v~~a~~~~~~~~~~~~~~~~~~-------~~~~l~~~l~~~~~~~--~v~~~~sGteA~~~al~~~~~~~~~~~~~ 162 (470)
.++.|.+++.+..+.++.+ ..|..+ ...++...+++++|.+ ++-++.++|.+.++++.... + ++
T Consensus 117 ~P~~v~~~i~~~~~~~Tay-tPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~-~--~~--- 189 (993)
T PLN02414 117 VPPVILRNILENPGWYTQY-TPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNN-I--LK--- 189 (993)
T ss_pred CCHHHHHHHHhChHHHhhc-CCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHh-c--cc---
Confidence 4555658887766544322 123222 1345667788888865 69999999999987765442 2 11
Q ss_pred CCCCcEEEEEccCccccccchhccc-CCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCcccc
Q 012138 163 SIDEAIIVSCCGCFHGRTLAAISMS-CDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVII 241 (470)
Q Consensus 163 ~~g~~~ii~~~~~yhg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~ 241 (470)
.++++|++.+..| ..+...+..- ...+ -.+..++. +... ... +.+.++++.. .|.+|.+.
T Consensus 190 -g~~~~VlVs~~~h-P~~~~v~~t~a~~~G---------ieV~~v~~---~~~~-~~~---~~v~~vlvq~-P~~~G~v~ 250 (993)
T PLN02414 190 -GKKKKFLIASNCH-PQTIDVCQTRADGLG---------LEVVVADE---KDFD-YSS---GDVCGVLVQY-PATDGEVL 250 (993)
T ss_pred -CCCCEEEEcCccC-HhHHHHHHHhhhhcC---------CEEEEecc---hhhc-ccc---CceEEEEEec-CCCCeEEc
Confidence 1234677766664 4433322111 1011 11234432 2211 111 2565665433 55699999
Q ss_pred CChhhHHHHHHHHHhcCcEEEEecccc-CCcccCCccccccCCCCcceeecc--ccc---c-CCCcceeEEEecHHHHhh
Q 012138 242 PPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDMVILG--KAL---G-GGVIPVSAVLADKEVMLC 314 (470)
Q Consensus 242 ~~~~~l~~l~~l~~~~gillI~Dev~~-g~g~~G~~~~~~~~~~~pdi~s~s--K~l---~-gG~~~ig~v~~~~~~~~~ 314 (470)
| +++|.++|+++|+++++ .++. +++..- ....+| .|+++.+ |.. + ||. ..|++.+++++.+.
T Consensus 251 d----v~~I~~~ah~~GaL~iV-aad~lal~~l~---~pge~G--ADi~vgsgqKwg~P~G~GGP-~aGflavr~~~~r~ 319 (993)
T PLN02414 251 D----YAEFVKNAHANGVKVVM-ATDLLALTMLK---PPGEWG--ADIVVGSAQRFGVPMGYGGP-HAAFLATSQEYKRL 319 (993)
T ss_pred C----HHHHHHHHHHcCCEEEE-EECHHHhcCCC---CHhhcc--CcEEEECCCccccCCCCCCC-CeeEEEECHHHHhh
Confidence 8 99999999999999999 4444 221110 122233 3666443 332 2 666 68999999988665
Q ss_pred cCcCCc-------c-C----------------CCCCCHHHHHHHHHHHH-----HHhh---hhHHHHHHHHHHHHHHHHH
Q 012138 315 IQPGEH-------G-S----------------TFGGNPLASAVAIASLD-----VIRD---EKLAERSAHLGEELRQHLF 362 (470)
Q Consensus 315 ~~~~~~-------~-~----------------t~~~~~~~~aaa~a~l~-----~~~~---~~~~~~~~~~~~~l~~~L~ 362 (470)
+..... + . ..+.|..+..+..+++. .+.. +++.+++..+..++.++|.
T Consensus 320 ~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~ 399 (993)
T PLN02414 320 MPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLK 399 (993)
T ss_pred CCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHh
Confidence 431100 0 0 11234433333333332 2222 4567788888899999887
Q ss_pred HHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHH
Q 012138 363 KIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHD 439 (470)
Q Consensus 363 ~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~ 439 (470)
+++.+ .... ..-..+.+.+ + +..++.++|.++||.+.....+.+|+|+...+|++||+.++++|..
T Consensus 400 ~~G~~---~~~~--~~f~~vt~~~--~----~~~~v~~~L~~~gI~l~~~~~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 400 KLGFQ---VQSL--PFFDTVKVKC--S----DADAIADAAAKVGINLRVVDANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred hcCCc---cCCC--CCcCeEEEec--C----CHHHHHHHHHHCCCeeEEecCCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 64322 1111 1111223332 2 3478999999999988766577899999999999999999999963
No 370
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.18 E-value=1.1e-09 Score=105.16 Aligned_cols=221 Identities=16% Similarity=0.146 Sum_probs=145.2
Q ss_pred CHHHHHHHHHHHHHcccc---C-CCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcE
Q 012138 93 HPKIMKALQEQAEKLTLS---S-RAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAI 168 (470)
Q Consensus 93 ~p~v~~a~~~~~~~~~~~---~-~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ 168 (470)
+|++.+++.+.++....- - .+...+-...+++.++...+.+.+.++|+-+.|+..++.... +++++
T Consensus 40 ~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~----------~~~Ev 109 (395)
T COG1921 40 SPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCGLTGAEAAAIVNNNAAAVLLTLNALA----------EGKEV 109 (395)
T ss_pred CHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhcccchhheeeECCcHHHHHHHHhhhc----------cCCeE
Confidence 588899888877653211 0 011112233566667777788899999999999888776553 24556
Q ss_pred EEEEcc---CccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEE-Ecc-ccCCCccccCC
Q 012138 169 IVSCCG---CFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFL-FEP-IQGEAGVIIPP 243 (470)
Q Consensus 169 ii~~~~---~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi-~ep-i~n~~G~~~~~ 243 (470)
|+..-+ ++|-+....+.+.+..-.. +.........+++.+|.+ ++++++ +-. -.+.+|.+.
T Consensus 110 Vis~g~lV~gg~~~v~d~~~~aG~~l~E---------vG~tn~t~~~d~~~AIne---~ta~llkV~s~~~~f~~~l~-- 175 (395)
T COG1921 110 VVSRGELVEGGAFRVPDIIRLAGAKLVE---------VGTTNRTHLKDYELAINE---NTALLLKVHSSNYGFTGMLS-- 175 (395)
T ss_pred EEEccccccCCCCChhHHHHHcCCEEEE---------ecccCcCCHHHHHHHhcc---CCeeEEEEeecccccccccc--
Confidence 665211 4565666666555532111 111111268899999988 677766 433 224566665
Q ss_pred hhhHHHHHHHHHhcCcEEEEeccccCCcccCCcccc-ccCCCCcceeecc--ccccCCCcceeEEEecHHHHhhcCcCCc
Q 012138 244 DGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEH 320 (470)
Q Consensus 244 ~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~-~~~~~~pdi~s~s--K~l~gG~~~ig~v~~~~~~~~~~~~~~~ 320 (470)
+++++++|++||+++|+|..-....+ +.... ......+|+++|| |.|+|. +.|.+++++++++.++....
T Consensus 176 ---~~~l~~ia~~~~lpvivD~aSg~~v~--~e~~l~~~la~GaDLV~~SgdKllgGP--qaGii~GkKelI~~lq~~~l 248 (395)
T COG1921 176 ---EEELVEIAHEKGLPVIVDLASGALVD--KEPDLREALALGADLVSFSGDKLLGGP--QAGIIVGKKELIEKLQSHPL 248 (395)
T ss_pred ---HHHHHHHHHHcCCCEEEecCCccccc--cccchhHHHhcCCCEEEEecchhcCCC--ccceEechHHHHHHHHhhhh
Confidence 88999999999999999987543322 11111 2233457999998 666653 78889999999999886655
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhh
Q 012138 321 GSTFGGNPLASAVAIASLDVIRDE 344 (470)
Q Consensus 321 ~~t~~~~~~~~aaa~a~l~~~~~~ 344 (470)
...+-......++..++|+.+...
T Consensus 249 ~Ralrv~K~tla~l~~aLe~y~~~ 272 (395)
T COG1921 249 KRALRVDKETLAALEAALELYLQP 272 (395)
T ss_pred hhhhhcCcHhHHHHHHHHHHHcCc
Confidence 666667888999999999987764
No 371
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.15 E-value=4.8e-11 Score=113.45 Aligned_cols=227 Identities=21% Similarity=0.250 Sum_probs=57.4
Q ss_pred ccccCCCC--CHHHHHHHHHHHHHccccC---C-CCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchh
Q 012138 85 SAVNQGHC--HPKIMKALQEQAEKLTLSS---R-AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYV 158 (470)
Q Consensus 85 ~~~~lG~~--~p~v~~a~~~~~~~~~~~~---~-~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~ 158 (470)
...+||.+ ++++.+++.+.+..+..-- . +--..-+..+++.++++.|.+..+++|+...|+..++..+..
T Consensus 9 lHTnLGRs~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~ltgAeaA~VvNnnaAAv~L~l~~la~---- 84 (367)
T PF03841_consen 9 LHTNLGRSPLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCELTGAEAALVVNNNAAAVLLALNTLAK---- 84 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc----
Confidence 34556653 4777888777765432110 0 000111345677788888999999999999999988886643
Q ss_pred cccCCCCCcEEEE------EccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEE-Ec
Q 012138 159 KKKFSIDEAIIVS------CCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFL-FE 231 (470)
Q Consensus 159 ~~~~~~g~~~ii~------~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi-~e 231 (470)
++++|++ .-++| +....+..++..-.. +-.-..-.+++.|++|.+ +|++++ +.
T Consensus 85 ------~~EvIvsRGelVeiGgsF--Rip~vm~~sGa~lvE---------VGttN~t~~~Dye~AI~e---~Ta~ll~Vh 144 (367)
T PF03841_consen 85 ------GKEVIVSRGELVEIGGSF--RIPDVMRQSGARLVE---------VGTTNRTHLSDYEKAITE---NTAALLKVH 144 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------cccccccccccccccccc--ccccccccccccccc---------cccccccccccccccccc---ccccccccc
Confidence 5555554 12222 122233333321110 000000147888999987 888887 76
Q ss_pred c----ccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccC------CcccCCccccccCCCCcceeecc--ccccCCC
Q 012138 232 P----IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG------LARSGRMLASDWEEVRPDMVILG--KALGGGV 299 (470)
Q Consensus 232 p----i~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g------~g~~G~~~~~~~~~~~pdi~s~s--K~l~gG~ 299 (470)
+ +.+-++.+. ++++.+++++|++++|+|-.-+. +|..+..-..+......|+++|| |.++|.
T Consensus 145 ~Sn~~i~GFt~~~~-----~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGP- 218 (367)
T PF03841_consen 145 TSNFRIQGFTGEVS-----LEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGP- 218 (367)
T ss_dssp ---------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS--
T ss_pred cccccccccccccc-----HHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCC-
Confidence 4 223355553 89999999999999999976521 12222221123333446999999 666654
Q ss_pred cceeEEEecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHh
Q 012138 300 IPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR 342 (470)
Q Consensus 300 ~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~ 342 (470)
..|.+++++++++.++.......+-..-+..++..++|+...
T Consensus 219 -QaGiI~Gkk~lI~~lk~~pl~RalrvdK~tla~L~atL~~Y~ 260 (367)
T PF03841_consen 219 -QAGIIVGKKELIEKLKKHPLGRALRVDKLTLAALEATLRLYL 260 (367)
T ss_dssp -S-EEEEEEHHHHHHHHHHHHTTT-B--HHHHHHHHHHHHH--
T ss_pred -CeEEEEeCHHHHHHHhhCCCcceEeeCHHHHHHHHHHHHHHH
Confidence 678999999999999866666667788899999999998754
No 372
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=99.10 E-value=2.8e-08 Score=90.79 Aligned_cols=334 Identities=16% Similarity=0.136 Sum_probs=198.1
Q ss_pred ccCCCCCHHHHHHHHHHHHHccc------cCCCC-CCCcHHHHHHHHhhhhCC--CeEEecCChhHHHHHHHHHHHHhch
Q 012138 87 VNQGHCHPKIMKALQEQAEKLTL------SSRAF-YNDKFPVFAERLTSMFGY--DMVLPMNTGAEGVETALKLARKWGY 157 (470)
Q Consensus 87 ~~lG~~~p~v~~a~~~~~~~~~~------~~~~~-~~~~~~~l~~~l~~~~~~--~~v~~~~sGteA~~~al~~~~~~~~ 157 (470)
+++|..+....+.+.+.+++..- ..+.. .-...+-+-..++.+.|. +.|-++|+=|.-+...+-.+.+.+
T Consensus 74 NSLGLmPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iVGA~e~EvavmNsLTvNlh~Ll~sFyKPT- 152 (465)
T KOG3846|consen 74 NSLGLMPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIVGAQENEVAVMNSLTVNLHSLLISFYKPT- 152 (465)
T ss_pred cccccCchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhhccCCchhhhhHhhhhhHHHHHHHHhcCCc-
Confidence 66887888888888888876421 11100 001112233445555554 457777876665555554443321
Q ss_pred hcccCCCCCcEEEEEccCccccccch---hcccCCcccccCC---CCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEc
Q 012138 158 VKKKFSIDEAIIVSCCGCFHGRTLAA---ISMSCDNEAIRGF---GPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFE 231 (470)
Q Consensus 158 ~~~~~~~g~~~ii~~~~~yhg~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~e 231 (470)
+.+.+|+....+|....... +.+-+.. ....+ .|- .+-..+ -.+++-+.|+..++.++.|++.
T Consensus 153 ------ekR~KILlE~kaFPSDhYAiesQ~~lhG~~-~e~sm~~iePR-EGEetl---RteDILd~IEkngDeiA~v~fS 221 (465)
T KOG3846|consen 153 ------EKRFKILLEKKAFPSDHYAIESQCKLHGIS-PENSMIQIEPR-EGEETL---RTEDILDTIEKNGDEIALVCFS 221 (465)
T ss_pred ------chhhhhhhccCCCCchHHHHHhhhhhcCCC-hHHheEEeccc-ccccch---hHHHHHHHHHhcCCeEEEEEee
Confidence 34567888777773322221 1111100 00000 000 001111 3567777788888899999999
Q ss_pred cccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHH
Q 012138 232 PIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV 311 (470)
Q Consensus 232 pi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~ 311 (470)
.+|--||..++ +.+|...-+..|+++=.|=+|+ +|- ...-...||++.-..+--|-+..|...+|.+...++.
T Consensus 222 GvqyYTGQ~Fd----i~aIT~Agq~kgc~VGfDLAHA-vgN--VpL~LHdWgVDFACWCSYKYlnaGaGgIgGlFvHekh 294 (465)
T KOG3846|consen 222 GVQYYTGQYFD----IGAITFAGQFKGCLVGFDLAHA-VGN--VPLQLHDWGVDFACWCSYKYLNAGAGGIGGLFVHEKH 294 (465)
T ss_pred cceeecccccc----hhhhhhcccCCCcEechhhhhh-hcC--CceEEeecCCceEEEeeecccccCCCccceeeeehhh
Confidence 99999999998 9999977788899999999887 221 1122334677544455667776444366766665443
Q ss_pred HhhcCc------------------------CCccCCCC-CCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHH
Q 012138 312 MLCIQP------------------------GEHGSTFG-GNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFK 363 (470)
Q Consensus 312 ~~~~~~------------------------~~~~~t~~-~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~ 363 (470)
.....+ +..+...+ ++.+..++...+|++..+ ++++++.--+..++...++.
T Consensus 295 ~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~ 374 (465)
T KOG3846|consen 295 TKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKA 374 (465)
T ss_pred hcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHH
Confidence 332211 12233333 444566667778887765 34444444444444444443
Q ss_pred HH-hhCC-----CceEE-----EeccceeEEEEeccCCCchhHHHHHHHHHHcCceeccCCCCEEEEec-CCCCCHHHHH
Q 012138 364 IQ-QQFP-----NYVKE-----VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTP-PLSISSNELQ 431 (470)
Q Consensus 364 l~-~~~p-----~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~~-~~~~t~e~i~ 431 (470)
.. .++| ..+.. ...+|.-+.+.+.. ....+.++|.++|+++....+|.||++| |+..+..++.
T Consensus 375 ~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fss-----p~~~vfqeL~krGv~~DkR~PNvIRvAPvpLYN~f~Dvy 449 (465)
T KOG3846|consen 375 SKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSS-----PTPKVFQELHKRGVIGDKRRPNVIRVAPVPLYNTFSDVY 449 (465)
T ss_pred hcccCchhhhcceeEEEeCCcccccccceEEEEeCC-----CchHHHHHHHHcCeeccccCCCceEeecchhhccHHHHH
Confidence 21 1111 01211 23346666665554 3467899999999999888899999998 8999999999
Q ss_pred HHHHHHHHHHhccc
Q 012138 432 EGSKALHDVLELDL 445 (470)
Q Consensus 432 ~~~~~l~~~l~~~~ 445 (470)
.+++.|.+++. .+
T Consensus 450 ~f~n~L~e~~d-~~ 462 (465)
T KOG3846|consen 450 IFVNALNEAMD-KL 462 (465)
T ss_pred HHHHHHHHHHH-Hh
Confidence 99999999987 54
No 373
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.09 E-value=5e-08 Score=104.75 Aligned_cols=275 Identities=15% Similarity=0.109 Sum_probs=162.0
Q ss_pred HHHHHHHhhhhCCCe--EEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCC
Q 012138 120 PVFAERLTSMFGYDM--VLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFG 197 (470)
Q Consensus 120 ~~l~~~l~~~~~~~~--v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~ 197 (470)
-++...+++++|++. +-+..+++.+.|+++.+.+. ++ ..+++|++.+.. |-.+...+.....
T Consensus 112 ~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~---~~----~~~~~vlv~~~~-hP~~~~v~~t~a~-------- 175 (939)
T TIGR00461 112 LNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNV---SK----KKANKFFVAKDL-HPQTKSVLHTRAK-------- 175 (939)
T ss_pred HHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHh---hc----CCCCEEEECCCC-CcchHHHHHHHHH--------
Confidence 356778888999874 57788888888866554332 11 123467666655 5444322221110
Q ss_pred CCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcc
Q 012138 198 PLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML 277 (470)
Q Consensus 198 ~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~ 277 (470)
+..-++..+ |+++|++.+ +++++++.. .|-.|.+.+ +++|.++++++|.++|++.-...++-.-+
T Consensus 176 ~~g~~v~~~---~~~~l~~~~-----~~~~v~~q~-Pn~~G~ied----~~~i~~~~h~~gal~~~~ad~~al~ll~~-- 240 (939)
T TIGR00461 176 PFGIEVIVV---DCSDIKKAV-----DVFGCLLQY-PATDGSILD----YKQLIDALHSHKSLVSVAADLMALTLLTP-- 240 (939)
T ss_pred hcCcEEEEE---cHHHHhhcC-----CEEEEEEEC-CCCCeEEec----HHHHHHHHHHcCCEEEEEechHHhCCcCC--
Confidence 000112344 666666544 467777755 566899887 99999999999999999755442211111
Q ss_pred ccccCCCCccee-ecccccc-----CCCcceeEEEecHHHHhhcCcCCc----------------------------cCC
Q 012138 278 ASDWEEVRPDMV-ILGKALG-----GGVIPVSAVLADKEVMLCIQPGEH----------------------------GST 323 (470)
Q Consensus 278 ~~~~~~~~pdi~-s~sK~l~-----gG~~~ig~v~~~~~~~~~~~~~~~----------------------------~~t 323 (470)
...+|. |++ -.+|.++ ||. ..|++.+++++.+.+..... .+.
T Consensus 241 -Pge~Ga--Di~vg~~q~fg~p~g~GGP-~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSN 316 (939)
T TIGR00461 241 -PGHYGA--DIVLGSSQRFGVPMGYGGP-HAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSN 316 (939)
T ss_pred -HHHcCC--cEEeeCCCccCCCCCCCCC-ceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcc
Confidence 112232 655 2234444 565 57888888887776532100 011
Q ss_pred CCCCHHHHH-HHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHH
Q 012138 324 FGGNPLASA-VAIASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDIC 399 (470)
Q Consensus 324 ~~~~~~~~a-aa~a~l~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 399 (470)
...+...++ .+...+..+..+ ++.++...+..++.+.|.+.+- ..+.. ..|--+.+..+. .++.++.
T Consensus 317 ICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~------~~~~~-~fF~~~~v~~~~--~~~~~i~ 387 (939)
T TIGR00461 317 ICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDPH------ELINK-TWFDTLTVKVGN--GISSELL 387 (939)
T ss_pred hhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCC------cccCC-CccceEEEEeCC--CCHHHHH
Confidence 111222222 222223444443 4455666777888888877432 22222 223233333221 2578899
Q ss_pred HHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHH
Q 012138 400 LKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALH 438 (470)
Q Consensus 400 ~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~ 438 (470)
+++.++||.+....++.+++++...+|++||+.+++.+.
T Consensus 388 ~~~~~~gi~l~~~~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 388 KAAEEFNINLRAVDTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred HHHHHCCCeeeecCCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 999999999887667799999999999999999999995
No 374
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.05 E-value=3.1e-07 Score=85.96 Aligned_cols=317 Identities=16% Similarity=0.207 Sum_probs=176.6
Q ss_pred CcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCC
Q 012138 117 DKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGF 196 (470)
Q Consensus 117 ~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 196 (470)
..+..|++...+.+|.+.++.|.-|-.|-...+..+++.+-.. || .+.+.+++.|.-.+.+-....+. ..+.-+
T Consensus 79 rs~~~L~~avkdifGfq~~iPthQGRgAE~Il~~i~ik~~~~~----pg-~~~~~~sN~~FdTTr~h~~~ng~-~~~n~~ 152 (471)
T COG3033 79 RSYYALADAVKDIFGFQYTIPTHQGRGAENILIPILIKKGEQE----PG-SKMVAFSNYHFDTTRGHIQINGA-TPRNVY 152 (471)
T ss_pred ccHHHHHHHHHHhcCceeeeeccCCccHHHHHHHHHhhhcccc----CC-ccccccccceecchhHHHHhcCC-cccccc
Confidence 3457888889999999999999988888777766666532222 34 35666665542222222222111 011111
Q ss_pred CCCCCC-eeeecCC---CHHHHHHHHHhcC-CCeEEEEEcc-ccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccC-
Q 012138 197 GPLLPG-HLKVDFG---DITALEKIFKESG-DQIAGFLFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG- 269 (470)
Q Consensus 197 ~~~~~~-~~~~~~~---d~~~Le~~l~~~~-~~~~~vi~ep-i~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g- 269 (470)
.+.-.+ .+..|+. |++.|+++|++-+ +++..|++.- .|+.+|.-. +-+-++++.++|++||+.++.|.+...
T Consensus 153 ~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpV-Sm~n~r~v~~ia~ky~ipvv~Da~RfaE 231 (471)
T COG3033 153 VDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPV-SMANMKAVYEIAKKYDIPVVMDAARFAE 231 (471)
T ss_pred ccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcc-hHHhHHHHHHHHHHcCCcEEeehhhhhh
Confidence 111000 1122221 8999999999876 4566666443 355678777 999999999999999999999987641
Q ss_pred ---CcccCCccccccCCCC---------cceeecc-ccccCCCcceeE-EEecHH----HHhhcCc----CCccCCCCC-
Q 012138 270 ---LARSGRMLASDWEEVR---------PDMVILG-KALGGGVIPVSA-VLADKE----VMLCIQP----GEHGSTFGG- 326 (470)
Q Consensus 270 ---~g~~G~~~~~~~~~~~---------pdi~s~s-K~l~gG~~~ig~-v~~~~~----~~~~~~~----~~~~~t~~~- 326 (470)
|-..-. -.+..|.+. .|-.++| |. -|+..+|. ++.+++ +...++. .....||++
T Consensus 232 NaYFIk~rE-~gYrd~sI~~IarEm~sYaD~~~mS~KK--D~lvnmGGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYGgl 308 (471)
T COG3033 232 NAYFIKQRE-PGYRDWSIEEIAREMYSYADGCTMSAKK--DGLVNMGGFLCFKDDSFFDVYEECRTLVVVQEGFPTYGGL 308 (471)
T ss_pred hhhhhhhcC-cccccccHHHHHHHHHhhhhhheeeccc--cceeccccEEEecCccHHHHHHHHHhheEeeccccccCcc
Confidence 211100 011222221 1333443 21 12224443 444433 3333321 123344542
Q ss_pred CHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC-------chhHHHHH
Q 012138 327 NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-------PVSAYDIC 399 (470)
Q Consensus 327 ~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~ 399 (470)
..-.+.+....|..--+.++.++.-+-.++|.++|.+. .+..+.+.|..-.+ ++.... ...++.++
T Consensus 309 ~GrdmealAvGL~e~~~~~yl~~Rv~Qv~YL~~~l~~~------GVpi~~paGGHavf-vda~~~lphip~eqFpaqala 381 (471)
T COG3033 309 AGRDMEALAVGLREGVNFDYLAHRVAQVQYLADGLEEA------GVPIVQPAGGHAVF-VDAGKFLPHIPAEQFPAQALA 381 (471)
T ss_pred cchhHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhc------CCeeEecCCCceEE-eehhhhcCCCChhhCcHHHHH
Confidence 22223333333443334455566666678888888885 34344455444333 332211 13466777
Q ss_pred HHHHHc-CceeccC-----------------CCCEEEEecCC-CCCHHHHHHHHHHHHHHHhcccCCCCCC
Q 012138 400 LKMKER-GILAKPT-----------------HDTIVRLTPPL-SISSNELQEGSKALHDVLELDLPKMRKP 451 (470)
Q Consensus 400 ~~l~~~-Gv~~~~~-----------------~~~~iR~~~~~-~~t~e~i~~~~~~l~~~l~~~~~~~~~~ 451 (470)
-+|... ||-+.-- .-..+|+.+|. +.|.+++|..++.++++.+ +...++-.
T Consensus 382 ~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e-~~~~ikgL 451 (471)
T COG3033 382 CELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKE-NAEDIKGL 451 (471)
T ss_pred HHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHh-ccccCCCc
Confidence 777555 8765311 13679998765 4689999999999999998 66555443
No 375
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.04 E-value=1.9e-08 Score=99.53 Aligned_cols=234 Identities=20% Similarity=0.154 Sum_probs=129.4
Q ss_pred cHHHHHHHHhhhhCCC---------eEEecCChhHHHHHHHHHHHHhchhc---ccCCCCCcEEEEEccCccccccchhc
Q 012138 118 KFPVFAERLTSMFGYD---------MVLPMNTGAEGVETALKLARKWGYVK---KKFSIDEAIIVSCCGCFHGRTLAAIS 185 (470)
Q Consensus 118 ~~~~l~~~l~~~~~~~---------~v~~~~sGteA~~~al~~~~~~~~~~---~~~~~g~~~ii~~~~~yhg~~~~~~~ 185 (470)
...++.+++++++|.+ .-++|+|||+||..|+.++|.+.... ++.+...+.++.....-|-+...+..
T Consensus 80 ~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~ 159 (373)
T PF00282_consen 80 IEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAAR 159 (373)
T ss_dssp HHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHH
T ss_pred chHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcc
Confidence 3456667888888765 36899999999999999998753221 12110223455555544776666655
Q ss_pred ccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcC--CCeE-EEEEccccCCCccccCChhhHHHHHHHHHhcCcEEE
Q 012138 186 MSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG--DQIA-GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMI 262 (470)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~--~~~~-~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI 262 (470)
+-+-.....+..+ ...+ |+++|+++|++.. ..+. +|+..--...+|.+-| +++|.++|++|+++|+
T Consensus 160 ~lGlg~~~I~~~~----~~~m---d~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~----l~~i~~i~~~~~~wlH 228 (373)
T PF00282_consen 160 ILGLGVRKIPTDE----DGRM---DIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDP----LEEIADICEKYNIWLH 228 (373)
T ss_dssp HTTSEEEEE-BBT----TSSB----HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-S----HHHHHHHHHHCT-EEE
T ss_pred eeeeEEEEecCCc----chhh---hHHHhhhhhcccccccccceeeeccCCCcccccccC----HHHHhhhccccceeee
Confidence 5543311110000 0112 7899999987632 2233 4555555667899998 9999999999999999
Q ss_pred EeccccCCcccCCccccccCCCC-cceeec--cccccCCCcceeEEEecHH--HHhhcC--c-CCc-------------c
Q 012138 263 ADEIQSGLARSGRMLASDWEEVR-PDMVIL--GKALGGGVIPVSAVLADKE--VMLCIQ--P-GEH-------------G 321 (470)
Q Consensus 263 ~Dev~~g~g~~G~~~~~~~~~~~-pdi~s~--sK~l~gG~~~ig~v~~~~~--~~~~~~--~-~~~-------------~ 321 (470)
+|.+++|....-+.+..-..++. .|-+++ -|.+...+ +.|+++.+.. +.+.+. . +.. .
T Consensus 229 VDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~-~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~ 307 (373)
T PF00282_consen 229 VDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPY-GCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGD 307 (373)
T ss_dssp EEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SS-S-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEE
T ss_pred ecccccccccccccccccccccccccccccchhhhhcCCc-cceeEEeecccchHHHhccChhhhccccccccccccccc
Confidence 99999973221111111112221 354443 48888777 8999887653 222221 0 000 0
Q ss_pred CCCCCC-HHHHHHHHHHHHHHhhhhHHHHH---HHHHHHHHHHHHH
Q 012138 322 STFGGN-PLASAVAIASLDVIRDEKLAERS---AHLGEELRQHLFK 363 (470)
Q Consensus 322 ~t~~~~-~~~~aaa~a~l~~~~~~~~~~~~---~~~~~~l~~~L~~ 363 (470)
.++.++ ......++.+|+.+..+.+.+.+ .++++++.+.|++
T Consensus 308 ~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~ 353 (373)
T PF00282_consen 308 YTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRK 353 (373)
T ss_dssp GSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 112222 34445556666766665555544 4455555555554
No 376
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.95 E-value=1.6e-07 Score=92.52 Aligned_cols=278 Identities=15% Similarity=0.144 Sum_probs=137.2
Q ss_pred HHHHHHHHhhhhCCCeE--EecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCC
Q 012138 119 FPVFAERLTSMFGYDMV--LPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGF 196 (470)
Q Consensus 119 ~~~l~~~l~~~~~~~~v--~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 196 (470)
.-++...+++++|++.+ -+..+++.+-|+++.+.+. +++ .+++|++.... |..+...+.....+.
T Consensus 112 lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~---~~~----~~~~vlv~~~~-hP~~~~v~~t~a~~~----- 178 (429)
T PF02347_consen 112 LFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRA---TKR----KRNKVLVPESL-HPQTRAVLRTYAAPL----- 178 (429)
T ss_dssp HHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHH---HTT-------EEEEETTS--CHHHHHHHHHCCHC-----
T ss_pred HHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHh---ccc----CCcEEEEcCCc-ChhhHHHHHHhhhhC-----
Confidence 34678889999999864 5566777777765444443 111 22366665554 666554433222110
Q ss_pred CCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCc
Q 012138 197 GPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM 276 (470)
Q Consensus 197 ~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~ 276 (470)
.-+++.++.++-.... .+++++|+++. .|-.|.+.+ +++|.++++++|.++|+ -+ ..--.+-+
T Consensus 179 ---g~~iv~~~~~~~~~~d------~~~~a~v~vq~-Pn~~G~~ed----~~~i~~~~h~~gal~~~-~a--d~~aL~~l 241 (429)
T PF02347_consen 179 ---GIEIVEVPLDEDGTTD------DDDTAAVMVQN-PNTFGVFED----IKEIADIAHAAGALVIV-GA--DPNALGGL 241 (429)
T ss_dssp ---CEEEEEE-BBTTCSB-------STTEEEEEEES-S-TTSB--T----HHHHHHHHHHTT-EEEE-CG--GCCGCCTC
T ss_pred ---CeEEEEecccccCCcc------ccCeEEEEeec-CCCCceEee----HHHHHHHHHHcCCEEEE-ec--CHHHHhCc
Confidence 0112333322111000 24899999877 566899886 99999999999999987 22 11111111
Q ss_pred cccccCCCCccee-ecccccc-----CCCcceeEEEecHHHHhhcCcC----------------------------CccC
Q 012138 277 LASDWEEVRPDMV-ILGKALG-----GGVIPVSAVLADKEVMLCIQPG----------------------------EHGS 322 (470)
Q Consensus 277 ~~~~~~~~~pdi~-s~sK~l~-----gG~~~ig~v~~~~~~~~~~~~~----------------------------~~~~ 322 (470)
-.-..+|. ||+ -.+|.|| ||- ..|.+.++++++..+... ...+
T Consensus 242 ~~Pge~GA--DI~vg~~Q~fg~p~~~GGP-~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtS 318 (429)
T PF02347_consen 242 KSPGEYGA--DIVVGEHQTFGIPMGFGGP-GAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATS 318 (429)
T ss_dssp --GGGGT---SEEEECCTTTT---CCC-S---EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT
T ss_pred CChhhcCc--cEEeeCCCCCcccCCCCCC-CeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhh
Confidence 11122333 665 2245555 666 788888988877766211 0122
Q ss_pred CCCCCHHHHH-HHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHH
Q 012138 323 TFGGNPLASA-VAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDI 398 (470)
Q Consensus 323 t~~~~~~~~a-aa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 398 (470)
.++.|...++ ++...+..+.. .++.++...++.++.++|.++ ...+ -....|+-+.+.... .....++
T Consensus 319 NIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~-~~~~------~~~~~f~e~v~~~~~-~~~~~~l 390 (429)
T PF02347_consen 319 NICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKI-YGLP------FDNPFFFEFVVVFSK-DKEVEEL 390 (429)
T ss_dssp ---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT-TBEC------SSSSSBSSEEEEESS--HHHHHH
T ss_pred hhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHh-cCcc------cCCCCceeeeeecCC-cHHHHHH
Confidence 3334444433 34444555555 345566777888888888774 1111 111122222122221 1233446
Q ss_pred HHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHH
Q 012138 399 CLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKAL 437 (470)
Q Consensus 399 ~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l 437 (470)
.+++...|+.......+.+-+++.-.+|+||||.++++|
T Consensus 391 ~~~~~~~gl~~~~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 391 LKRGIEGGLNLRYPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp HHTT----EEEGGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred HHHHHhcCCCccccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 666666675554444569999999999999999999875
No 377
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.94 E-value=5.6e-07 Score=86.45 Aligned_cols=280 Identities=20% Similarity=0.210 Sum_probs=165.1
Q ss_pred HHHHHHhhhhCCC--eEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCC
Q 012138 121 VFAERLTSMFGYD--MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGP 198 (470)
Q Consensus 121 ~l~~~l~~~~~~~--~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 198 (470)
++...+++++|++ ..-....+|.+-|+++.+-+. ++ .+++++++.... |-.+...+..-.. +
T Consensus 124 efQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r~---~k----~k~~~~~V~~~v-hpqt~~Vl~Tra~--------~ 187 (450)
T COG0403 124 EFQTLVADLTGLDVANASMLDEATAAAEAMLMAKRV---TK----KKRNKFLVPKDV-HPQTLDVLRTRAE--------G 187 (450)
T ss_pred HHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHHh---hc----CcCceEEecCCC-CHHHHHHHHhhcc--------c
Confidence 3445677777766 355666777777766654443 11 124466665555 6665555433221 1
Q ss_pred CCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCc-cccCChhhHHHHHHHHHhcCcEEEEe--ccccCC-cccC
Q 012138 199 LLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAG-VIIPPDGYLKAVRDLCSKYNILMIAD--EIQSGL-ARSG 274 (470)
Q Consensus 199 ~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G-~~~~~~~~l~~l~~l~~~~gillI~D--ev~~g~-g~~G 274 (470)
+.-.+...+++|.++|+++ ++ ..+.+++++. .|-.| .+.+ +++|.+.++++|+++++= -.--++ -..|
T Consensus 188 ~g~~i~~~~~~d~~~l~~~-~~--~~~~gv~vQy-P~~~G~~~~d----~~~l~~~~h~~~al~~v~aDplaL~LL~pPG 259 (450)
T COG0403 188 LGIEIEVVDADDLDDLESA-DD--GDVFGVLVQY-PNTFGIVEED----LRALIEAAHSAGALVIVAADPLALGLLKPPG 259 (450)
T ss_pred CceEEEEeccchhhhhhhc-cc--cCeEEEEEec-CCCCCccchh----HHHHHHHHhhcCCEEEEEechhHhhccCCcc
Confidence 1122455666688888887 43 2789999988 44556 5555 999999999999987762 111121 1222
Q ss_pred CccccccCCCCccee-----ecccccc-CCCcceeEEEecHHHHhhcCcCC-----------------------------
Q 012138 275 RMLASDWEEVRPDMV-----ILGKALG-GGVIPVSAVLADKEVMLCIQPGE----------------------------- 319 (470)
Q Consensus 275 ~~~~~~~~~~~pdi~-----s~sK~l~-gG~~~ig~v~~~~~~~~~~~~~~----------------------------- 319 (470)
.+ | .||+ -|+=.++ ||. ..|++.+++++...+ |+.
T Consensus 260 e~------G--ADIvvG~~QrfGvPmgfGGP-hag~fA~~~~~~R~m-PGRlVG~S~D~~G~~A~rLaLQTREQHIRReK 329 (450)
T COG0403 260 EF------G--ADIVVGSAQRFGVPMGFGGP-HAGYFAVKDEFKRQM-PGRLVGVSVDAAGKRAFRLALQTREQHIRREK 329 (450)
T ss_pred cc------C--CceEEecCcccCCCcCCCCc-ceeeeeEhHhHhhcC-CCceeeeeecCCCCchhhhhHHHHHHHHhhhc
Confidence 22 2 2554 4555555 776 888888998887665 221
Q ss_pred ccCCCCCCHHHHHHHHH-HHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhH
Q 012138 320 HGSTFGGNPLASAVAIA-SLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSA 395 (470)
Q Consensus 320 ~~~t~~~~~~~~aaa~a-~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~ 395 (470)
..++.+.|....|.+.+ .+-++.. .++.++..++..++.++|++... .+..+.. ..|--+.+..+. ...
T Consensus 330 ATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~----g~~~~~~-~fFdt~~v~~~~--~~~ 402 (450)
T COG0403 330 ATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGA----GVELVFD-HFFDTFTVRVPE--EVA 402 (450)
T ss_pred cchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCC----ceEeccc-cceeeEEEecch--hHH
Confidence 11222223332222222 2222333 44666777788888888886532 1222222 333333333321 246
Q ss_pred HHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 012138 396 YDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 441 (470)
Q Consensus 396 ~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l 441 (470)
..+.++....|+-+..-....+-++..-.+|+++|+.+++.+....
T Consensus 403 ~~l~~~~~~~G~~L~~~~~~~~~ia~tEt~t~~~i~~l~~~~~~~~ 448 (450)
T COG0403 403 EALLAAAIAGGINLRRVDADTVLIALTETTTKEDIDALVAAFGGVN 448 (450)
T ss_pred HHHHHHHHhcCCceeeecCCceEEEeecccCHHHHHHHHHHHhhhc
Confidence 6677777777888776666688888888899999999999987654
No 378
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=98.92 E-value=4.8e-07 Score=91.16 Aligned_cols=293 Identities=12% Similarity=0.100 Sum_probs=158.2
Q ss_pred CCCcHHHHHHHHhhhhCCCe-EEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCC-ccc
Q 012138 115 YNDKFPVFAERLTSMFGYDM-VLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD-NEA 192 (470)
Q Consensus 115 ~~~~~~~l~~~l~~~~~~~~-v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~-~~~ 192 (470)
+.....+.++..++.+|.++ .+.+||-|.||..++..+.. +|+ .|++..++ |-+...++-+++. |.+
T Consensus 68 p~G~i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~~---------~GD-~VLvdRN~-HKSi~~glilaGa~Pvy 136 (557)
T COG1982 68 PEGPIKEAQELAARVFGADHTYFVVNGTSTANKAVINAVLT---------PGD-KVLVDRNC-HKSIHHGLILAGATPVY 136 (557)
T ss_pred CCccHHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhhcC---------CCC-EEEecCCc-cHHHHHHHHHcCCceEE
Confidence 34557788888999999986 45557777777777776654 455 77777776 8887777666654 333
Q ss_pred ccCCC-CCCCCeeeecCCCHHHHHHHHHhcCCC-eEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccC-
Q 012138 193 IRGFG-PLLPGHLKVDFGDITALEKIFKESGDQ-IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG- 269 (470)
Q Consensus 193 ~~~~~-~~~~~~~~~~~~d~~~Le~~l~~~~~~-~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g- 269 (470)
..+.. +...=...+ +.+.+++.+.++... ..+|+.+| +-.|.++. +++|++.+.++++++.+||++.-
T Consensus 137 l~p~~np~~gi~ggI---~~~~~~~~l~~~~~~~k~~vitnp--TYdGv~~n----~~~i~~~~~~~~a~v~~deah~~~ 207 (557)
T COG1982 137 LEPSRNPLYGIIGGI---PLETFKEALLAHPDAEKLAVITNP--TYDGVCYN----LRKIVELLHHYGAWVLYDEAHPAH 207 (557)
T ss_pred ecCCCCccccccCCC---CHHHHHHHHHhChhhheeEEEecC--ccceEeec----HHHHHHHHhhcCceEEhhhcCccc
Confidence 22111 100001222 789999888876544 34555555 34699998 99999999999999999999972
Q ss_pred CcccCCccccccCCCCcceeecc--ccccCCCcceeEEEec-------HHHHhhcCcCCccCCCCCCHHHHHHHHHHHHH
Q 012138 270 LARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLAD-------KEVMLCIQPGEHGSTFGGNPLASAVAIASLDV 340 (470)
Q Consensus 270 ~g~~G~~~~~~~~~~~pdi~s~s--K~l~gG~~~ig~v~~~-------~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~ 340 (470)
++..+.... ...+...|+++-| |.+++.- -.+.+-.+ +.+-+.+. ...+-+++-..+|..-. -+.
T Consensus 208 ~~~~~~l~~-~~~~~~~~~~tqS~HK~l~alS-QaS~iHv~~~~~~~~~r~nea~~---~h~STSPsY~l~ASlD~-Ar~ 281 (557)
T COG1982 208 FDFSPMLPE-SALNGGADFVTQSTHKLLAALS-QASMIHVKDGRAVNHERFNEALM---MHQSTSPSYPLMASLDV-ARM 281 (557)
T ss_pred ccccccCcc-hhhhcCceEEEechhhhhhhhh-hhHHHhhCCCccCCHHHHHHHHH---HHccCCchHHHHHHHHH-HHH
Confidence 333333322 1111233666555 6665321 22333333 23333332 22333444455554444 232
Q ss_pred Hhh---hhH----HHHHHHHHHHHHHHHHHHHhhCCCceEEEecc------c---------eeEEE-----EeccCCCch
Q 012138 341 IRD---EKL----AERSAHLGEELRQHLFKIQQQFPNYVKEVRGR------G---------LFNAV-----EFDKTALPV 393 (470)
Q Consensus 341 ~~~---~~~----~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~------g---------~~~~~-----~~~~~~~~~ 393 (470)
+.. ..+ .+..-+.++.+++...++. ++..+.+. + ..+.+ .+..+..|.
T Consensus 282 ~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~-----~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gi 356 (557)
T COG1982 282 QEGNAGRELWQEVIDEAIDFRKALRRLINEIG-----FFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGI 356 (557)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcC-----CeeeccccccCCcccccccccccccceeccccEEEEecCCCCC
Confidence 222 223 2333334444444443332 22211111 1 01111 011112367
Q ss_pred hHHHHHHHHHHcCceeccCCCCEEEEecCC--CCCHHHHHHHHHHHH
Q 012138 394 SAYDICLKMKERGILAKPTHDTIVRLTPPL--SISSNELQEGSKALH 438 (470)
Q Consensus 394 ~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~--~~t~e~i~~~~~~l~ 438 (470)
.+..+++.|+++|++..-.+...+-|.++. ......++.+++.+.
T Consensus 357 pg~~v~~~L~e~gii~e~~~d~~~lll~~~~~gk~~~lv~~L~~f~r 403 (557)
T COG1982 357 PGAIVAKYLREHGIIPEETGDYSNLLLFSPGIGKWQTLVDRLLEFKR 403 (557)
T ss_pred cHHHHHHHHHHcCCeeeecCCceeeEEeeeccchHHHHHHHHHHHHH
Confidence 889999999999998876665544443322 233444444444444
No 379
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.82 E-value=1.7e-07 Score=88.58 Aligned_cols=202 Identities=18% Similarity=0.241 Sum_probs=111.3
Q ss_pred CHHHHHHHHHH-HHHccc--cCCCCCCCc-HHHHHHHHhhhhCCCeEEec---CChhHHHHHHHHHHHHhchhcccCCCC
Q 012138 93 HPKIMKALQEQ-AEKLTL--SSRAFYNDK-FPVFAERLTSMFGYDMVLPM---NTGAEGVETALKLARKWGYVKKKFSID 165 (470)
Q Consensus 93 ~p~v~~a~~~~-~~~~~~--~~~~~~~~~-~~~l~~~l~~~~~~~~v~~~---~sGteA~~~al~~~~~~~~~~~~~~~g 165 (470)
..+|++|+++. +....+ ++...+.+. ++.|++-+++.++.+..++= -|||.|+..+|...++ ||
T Consensus 26 q~KVL~Af~~~~vs~~hf~~tTGYGY~D~GRd~le~iyA~vfgaE~ALVRpq~vSGTHAi~~~Lfg~Lr---------pG 96 (403)
T PF06838_consen 26 QLKVLKAFQENRVSDSHFAGTTGYGYDDIGRDKLERIYADVFGAEDALVRPQFVSGTHAIALALFGVLR---------PG 96 (403)
T ss_dssp HHHHHHHHHHTT--GGGCS---TT-TT-HHHHHHHHHHHHHCT-SEEEEETTS-SHHHHHHHHHHHH-----------TT
T ss_pred HHHHHHHHHHcCCChhhcCCCCcCCCCCccHHHHHHHHHHHhCchhhhhcccccchHHHHHHHHHhcCC---------CC
Confidence 34566666552 222111 122223443 78899999999999886643 5899999999998877 67
Q ss_pred CcEEEEEccCccccccchhcccCC-cccccCC------CCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCc
Q 012138 166 EAIIVSCCGCFHGRTLAAISMSCD-NEAIRGF------GPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAG 238 (470)
Q Consensus 166 ~~~ii~~~~~yhg~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G 238 (470)
| .+++..+.=.-.....+.+.++ +.....| .++.++. .+ |.+.++++++. ++++|++.---+-.-
T Consensus 97 D-~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~dg-~~---D~~~i~~~~~~---~tk~v~IQRSrGYs~ 168 (403)
T PF06838_consen 97 D-ELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTEDG-TI---DWEAIKKALKP---NTKMVLIQRSRGYSW 168 (403)
T ss_dssp --EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B-TTS-SB----HHHHHHHHHT---TEEEEEEE-S-TTSS
T ss_pred C-eEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEEeecCCC-Cc---CHHHHHHhhcc---CceEEEEecCCCCCC
Confidence 7 6665443311111122222221 1111111 1111111 11 89999999986 899999865222222
Q ss_pred cccCChhhHHHHHHHHHhc--CcEEEEeccccCCcccCCccccccCCCCccee--eccccccCCCccee-EEEecHHHHh
Q 012138 239 VIIPPDGYLKAVRDLCSKY--NILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGGGVIPVS-AVLADKEVML 313 (470)
Q Consensus 239 ~~~~~~~~l~~l~~l~~~~--gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~--s~sK~l~gG~~~ig-~v~~~~~~~~ 313 (470)
.-.-+.+.++++.+++|+. ++++++|.+|..|..+- +...+-.|++ |+-|..|||+.|.| +|++++++++
T Consensus 169 R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~-----EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe 243 (403)
T PF06838_consen 169 RPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQ-----EPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVE 243 (403)
T ss_dssp S----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS------GGGGT-SEEEEETTSGGGTTT-SS-EEEEESHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceecccc-----CccccchhheeccceeCCCCCccCcCCEEechHHHHH
Confidence 2222566677777777764 68999999999885442 3233445776 88899999986665 6789999988
Q ss_pred hcC
Q 012138 314 CIQ 316 (470)
Q Consensus 314 ~~~ 316 (470)
...
T Consensus 244 ~~a 246 (403)
T PF06838_consen 244 RAA 246 (403)
T ss_dssp HHH
T ss_pred HHH
Confidence 763
No 380
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.80 E-value=4e-07 Score=85.32 Aligned_cols=270 Identities=15% Similarity=0.145 Sum_probs=148.3
Q ss_pred EecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCc-----cccccchhcccCCcccccCCC-CCCCCeeeecCC
Q 012138 136 LPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCF-----HGRTLAAISMSCDNEAIRGFG-PLLPGHLKVDFG 209 (470)
Q Consensus 136 ~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~y-----hg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 209 (470)
+-.-||+.||..+..++.. |++ .|...+-.- ||.......+++...+...+. .+.+....+
T Consensus 110 VQp~SGSPANfavYtall~---------Ph~-RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~I--- 176 (477)
T KOG2467|consen 110 VQPYSGSPANFAVYTALLK---------PHE-RIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYI--- 176 (477)
T ss_pred eccCCCCchhhHHHhhhcC---------CCC-eeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCce---
Confidence 3445889999988887765 454 555533321 444333333333222211100 011223333
Q ss_pred CHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc-CCcccCCcc-ccccCCCCcc
Q 012138 210 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRML-ASDWEEVRPD 287 (470)
Q Consensus 210 d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~-g~g~~G~~~-~~~~~~~~pd 287 (470)
|.|.||+....- ++++||+-. +..-..++ ..+++++|++.|++|++|=+|. |+...|... -+++. |
T Consensus 177 DYD~Le~~A~~f--rPk~iiaG~--SaY~R~~D----YaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~----D 244 (477)
T KOG2467|consen 177 DYDKLEKTATLF--RPKLIIAGT--SAYSRLID----YARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYC----D 244 (477)
T ss_pred ehHHHHHHHHhc--CCcEEEecc--ccchhhcc----HHHHHHHHHhcCceeehhhhhHHHHHhcccCCCccccc----c
Confidence 788898877664 677888633 22223343 8999999999999999999987 665444331 13332 6
Q ss_pred eee--ccccccCCCcceeEEEecHHHHh---------------hcC----cCCccCCCCCCHHHHHHHHHHHHHHhh---
Q 012138 288 MVI--LGKALGGGVIPVSAVLADKEVML---------------CIQ----PGEHGSTFGGNPLASAVAIASLDVIRD--- 343 (470)
Q Consensus 288 i~s--~sK~l~gG~~~ig~v~~~~~~~~---------------~~~----~~~~~~t~~~~~~~~aaa~a~l~~~~~--- 343 (470)
+++ .-|+|-|. |.|.|..++-+.. ++. |+.+++..+ -.+++...+|+....
T Consensus 245 iVTTTTHKsLRGP--Rg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHN---htIaalAvALkQa~tpef 319 (477)
T KOG2467|consen 245 IVTTTTHKSLRGP--RGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHN---HTIAALAVALKQAMTPEF 319 (477)
T ss_pred eeeccccccccCC--cceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCc---chHHHHHHHHHhhCCHHH
Confidence 764 44888764 5566665543221 111 112222222 233333334554333
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCC-chhHHHHHHHHHHcCceec----cC-----C
Q 012138 344 EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-PVSAYDICLKMKERGILAK----PT-----H 413 (470)
Q Consensus 344 ~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~l~~~Gv~~~----~~-----~ 413 (470)
..+.+++..++..|.+.|.+.+-+ .+.. .....++.|.+..... +...+.+++.+ +|.+. |+ .
T Consensus 320 k~Yq~qV~~Nakala~~l~~~Gy~---lvtg-GTDnHlvLvDLr~~G~dGarvE~vle~~---~I~~NKNtvpGD~Sal~ 392 (477)
T KOG2467|consen 320 KEYQKQVLKNAKALASALISRGYK---LVTG-GTDNHLVLVDLRPKGVDGARVEKVLELC---HIALNKNTVPGDKSALS 392 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCce---EecC-CccceEEEEeccccCCchHHHHHHHHHh---hhhhcCCcCCCCccccC
Confidence 446677777888888888775432 1221 1234566666644331 22333444433 44332 33 3
Q ss_pred CCEEEEecCCCC----CHHHHHHHHHHHHHHHh
Q 012138 414 DTIVRLTPPLSI----SSNELQEGSKALHDVLE 442 (470)
Q Consensus 414 ~~~iR~~~~~~~----t~e~i~~~~~~l~~~l~ 442 (470)
++-+|+..|..+ .++|.++..+-|.++++
T Consensus 393 PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 393 PGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred CCceeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 677999776554 47888888888887776
No 381
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.77 E-value=3.3e-06 Score=82.01 Aligned_cols=331 Identities=18% Similarity=0.180 Sum_probs=181.1
Q ss_pred CHHHHHHHHHHHHHcccc-CCCC--CCCcHHHHHHHHhhhhCCC-e--EEecCChhHHHHHHHHHHHHhchhcccCCCCC
Q 012138 93 HPKIMKALQEQAEKLTLS-SRAF--YNDKFPVFAERLTSMFGYD-M--VLPMNTGAEGVETALKLARKWGYVKKKFSIDE 166 (470)
Q Consensus 93 ~p~v~~a~~~~~~~~~~~-~~~~--~~~~~~~l~~~l~~~~~~~-~--v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~ 166 (470)
+++..+-+.+.+..++.. ...+ ......+.-..++.+++.. . =.-|.||||++.++.+.-+......+++ ..
T Consensus 93 ~~~~~~l~~~~~~k~N~l~~d~fp~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I--~~ 170 (491)
T KOG1383|consen 93 EPELDKLIMEAYNKFNPLHPDEFPVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGI--DK 170 (491)
T ss_pred CcchhhHHHHHHhhcCccCccccchhHHHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCC--CC
Confidence 566666666666654221 1111 1223345555666666322 2 2456789999777777655432222332 12
Q ss_pred cEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhh
Q 012138 167 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY 246 (470)
Q Consensus 167 ~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~ 246 (470)
..|++.... |-....+...-. .+..-.++.++...+ |+..+.+.+++ +|.+++.+-.+-|+|.+-+
T Consensus 171 p~iv~~~~v-~~a~eK~a~yf~---v~l~~V~~~~~~~~~---D~~k~~~~i~e---Nti~lv~~~~~~p~G~~e~---- 236 (491)
T KOG1383|consen 171 PNIVTPQNV-HAAFEKAARYFE---VELREVPLDEGDYRV---DPGKVVRMIDE---NTIMLVGSLPNFPTGEIED---- 236 (491)
T ss_pred ccccchHHH-HHHHHHHHhhEE---EEEEeeeccccceEe---cHHHHHHHhcc---ceEEEEEEcCCCCccchhh----
Confidence 234433222 322111111000 011112222333444 88999998887 8889887777999999887
Q ss_pred HHHHHHHHHh-cCcEEEEeccccCCccc-CCccccccCCCC-c---ceeecc-c-cccCCCcceeEEEe-cHHHH-hhcC
Q 012138 247 LKAVRDLCSK-YNILMIADEIQSGLARS-GRMLASDWEEVR-P---DMVILG-K-ALGGGVIPVSAVLA-DKEVM-LCIQ 316 (470)
Q Consensus 247 l~~l~~l~~~-~gillI~Dev~~g~g~~-G~~~~~~~~~~~-p---di~s~s-K-~l~gG~~~ig~v~~-~~~~~-~~~~ 316 (470)
+++|.++.-+ +++++.+|.+-+||--. +.. ....|++. | .+.+-+ | ++..- .++|++- ++++. +.+.
T Consensus 237 ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~-~~~~fdFr~p~V~Sisa~~HKYGl~~~--G~~~vl~r~k~~~~~q~~ 313 (491)
T KOG1383|consen 237 VEKLADLLLEIWDIPIHVDACLGGFINPAGYL-NEEEFDFRVPGVTSISADGHKYGLAPA--GSSWVLYRNKELLPHQLF 313 (491)
T ss_pred HHHHHHHHHHHhCCceeecccCcccccccccc-CccccccCCCCceeEeeccceeeeeec--CcEEEEEcccccccceEE
Confidence 9999999999 99999999999887543 211 11223332 2 222223 2 23311 3456663 33332 2111
Q ss_pred --cCCccC-----C--CCCCHHHHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEE
Q 012138 317 --PGEHGS-----T--FGGNPLASAVAIASLDVIRDEK---LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV 384 (470)
Q Consensus 317 --~~~~~~-----t--~~~~~~~~aaa~a~l~~~~~~~---~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~ 384 (470)
....|+ | ++-+....++.++++-.+..++ ..+++.+....++++++++. .+.. .+...+..+
T Consensus 314 ~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~-----~i~i-~gkp~vs~~ 387 (491)
T KOG1383|consen 314 FHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIK-----GIKI-VGKPLVSFI 387 (491)
T ss_pred EeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccc-----ccee-cCCCcEEEE
Confidence 001111 1 1222234444555554444443 44556667778888887743 2332 234444444
Q ss_pred EeccCCCchhHHHHHHHHHHcCceeccC-CCCEEEEecCCCCCHHH-HHHHHHHHHHHHhcccCCCCCC
Q 012138 385 EFDKTALPVSAYDICLKMKERGILAKPT-HDTIVRLTPPLSISSNE-LQEGSKALHDVLELDLPKMRKP 451 (470)
Q Consensus 385 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-~~~~iR~~~~~~~t~e~-i~~~~~~l~~~l~~~~~~~~~~ 451 (470)
.++... .+-.++.+.|+++|..+... -+..+.+++...+..++ .++++.-|+++++ ++......
T Consensus 388 ~~~s~~--~~i~elsd~l~~~GW~lnalq~P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~-el~~~p~~ 453 (491)
T KOG1383|consen 388 LFGSND--VNIFELSDLLRKKGWILNALQFPAAIHICVTRVHAREDVADRFVADIRKVVE-ELKSLPES 453 (491)
T ss_pred EccCCc--cchhhhhHHHHhcCcCccccCCCCceEEEEEeeeccHHHHHHHHHHHHHHHH-HHHhCCCc
Confidence 333332 46778999999999887532 24466777667777666 5888889999999 88766553
No 382
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.59 E-value=3.2e-05 Score=80.55 Aligned_cols=234 Identities=17% Similarity=0.116 Sum_probs=132.5
Q ss_pred CcHHHHHHHHhhhhCCCe--EEecCChhHHHHHHHHHHHHhchh---cccCCC---------------------------
Q 012138 117 DKFPVFAERLTSMFGYDM--VLPMNTGAEGVETALKLARKWGYV---KKKFSI--------------------------- 164 (470)
Q Consensus 117 ~~~~~l~~~l~~~~~~~~--v~~~~sGteA~~~al~~~~~~~~~---~~~~~~--------------------------- 164 (470)
....++.+++++++|++. -.||+|||+||..+|.+||..... .+...+
T Consensus 123 ~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~ 202 (608)
T TIGR03811 123 QMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAG 202 (608)
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccccc
Confidence 445677788999988654 468999999999999999873100 000000
Q ss_pred -----------------CCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCC-----CHHHHHHHHHhc-
Q 012138 165 -----------------DEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG-----DITALEKIFKES- 221 (470)
Q Consensus 165 -----------------g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~Le~~l~~~- 221 (470)
.+-.++..+..-|-+...+..+-+-.. ..++.+|.+ |+++|+++|++.
T Consensus 203 ~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~---------~~vv~VpvD~~~rmd~~~L~~~I~~~~ 273 (608)
T TIGR03811 203 DQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGL---------DQVIPVPVDSNYRMDINELEKIIRKLA 273 (608)
T ss_pred cchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCc---------ccEEEeecCCCCcCCHHHHHHHHHHHH
Confidence 000022233233544444433332210 113344432 799999998752
Q ss_pred --CCCeEEEEEccccCCCccccCChhhHHHHHHHH---HhcCc--EEEEeccccCCccc------CCccc----------
Q 012138 222 --GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLC---SKYNI--LMIADEIQSGLARS------GRMLA---------- 278 (470)
Q Consensus 222 --~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~---~~~gi--llI~Dev~~g~g~~------G~~~~---------- 278 (470)
+..+-+|+..--...+|.+-| +++|.++| +++|+ +|++|.+++|+.+. +.+..
T Consensus 274 ~~g~p~~~VVataGTT~~GaiDp----l~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~ 349 (608)
T TIGR03811 274 AEKTPILGVVGVVGSTEEGAVDG----IDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAE 349 (608)
T ss_pred hcCCCeEEEEEEcCCcCCcccCC----HHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhccccc
Confidence 234556665554677899998 88888888 77898 69999999986311 00000
Q ss_pred ---c-------------ccCCC-Ccceeecc--ccccCCCcceeEEEecHH-HHhhcCc---CC--cc---------CCC
Q 012138 279 ---S-------------DWEEV-RPDMVILG--KALGGGVIPVSAVLADKE-VMLCIQP---GE--HG---------STF 324 (470)
Q Consensus 279 ---~-------------~~~~~-~pdi~s~s--K~l~gG~~~ig~v~~~~~-~~~~~~~---~~--~~---------~t~ 324 (470)
+ ...++ ..|-+++- |.+.-.+ +.|+++.+.. +.+.+.. +. .+ .+.
T Consensus 350 ~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py-~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p~~~g~~~l 428 (608)
T TIGR03811 350 YGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPY-SAGGIVIQDIRMRDVISYFATYVFEKGADIPALLGAYIL 428 (608)
T ss_pred ccccccccccccHhHHHHHhcCcCceEEEeCcccccccCC-CeEEEEEeCHHHHHHHhcCcchhccccccCcccccccce
Confidence 0 00122 13444443 7666666 8888887643 3332211 10 00 111
Q ss_pred CCCH--HHHHHHHHHHHHH--hh---hhHHHHHHHHHHHHHHHHHHH
Q 012138 325 GGNP--LASAVAIASLDVI--RD---EKLAERSAHLGEELRQHLFKI 364 (470)
Q Consensus 325 ~~~~--~~~aaa~a~l~~~--~~---~~~~~~~~~~~~~l~~~L~~l 364 (470)
.++. ..+++.+.+++.+ .. ..+.++..++++++.+.|++.
T Consensus 429 egSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 429 EGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred ecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2332 3355666777776 33 456677777888888888774
No 383
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.56 E-value=4e-06 Score=80.92 Aligned_cols=221 Identities=14% Similarity=0.134 Sum_probs=123.7
Q ss_pred CHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCccc---CCc-cccccCCCC
Q 012138 210 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS---GRM-LASDWEEVR 285 (470)
Q Consensus 210 d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~---G~~-~~~~~~~~~ 285 (470)
|.+++|+++++.+....+.+++......+... +.+++|.++|++|||+.|+-.+|+ +--. ... -+.. .|..
T Consensus 140 d~~~ie~~i~~~G~~~iLcvltttscfapr~~---D~i~~IakiC~~~~IPhlvNnAYg-vQ~~~~~~~i~~a~~-~GRv 214 (389)
T PF05889_consen 140 DLEAIEAKIEELGADNILCVLTTTSCFAPRLP---DDIEEIAKICKEYDIPHLVNNAYG-VQSSKCMHLIQQAWR-VGRV 214 (389)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEEESSTTTTB-------HHHHHHHHHHHT--EEEEGTTT-TT-HHHHHHHHHHHH-HSTC
T ss_pred cHHHHHHHHHHhCCCCeEEEEEecCccCCCCC---ccHHHHHHHHHHcCCceEEccchh-hhHHHHHHHHHHHHh-cCCc
Confidence 68999999987765544555544354455543 359999999999999999999986 2000 000 0001 1222
Q ss_pred -cceeecccccc---CCCcceeEEE-ecHHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHH
Q 012138 286 -PDMVILGKALG---GGVIPVSAVL-ADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEEL 357 (470)
Q Consensus 286 -pdi~s~sK~l~---gG~~~ig~v~-~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l 357 (470)
.++-++.|-|= ||- .+. .++..++.+....-+..+..+.+- ....|..+.. ..+.....+.-.++
T Consensus 215 da~vqS~dkNF~VPvGga----i~As~~~~~i~~vs~~YpGRas~sp~ld---~~itLl~LG~~g~~~ll~~r~~~f~~l 287 (389)
T PF05889_consen 215 DAFVQSTDKNFMVPVGGA----IMASFDPSGILAVSKEYPGRASASPSLD---LFITLLSLGCTGYGALLKERKASFPYL 287 (389)
T ss_dssp SEEEEEHHHHHCEESSHE----EEEESSHHHHHHHHHTSHSHBTSHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeeeecCCCEEecCCCc----EEEecCHHHHHHHHHHhhhhhhcccchH---HHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 23446667654 332 233 345555555432222222222221 2233333333 45666777788888
Q ss_pred HHHHHHHHhhCCCceEEEeccceeEEEEeccCCC--chhHHHHHHHHHHcCce----eccCC-----------CCEEEEe
Q 012138 358 RQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL--PVSAYDICLKMKERGIL----AKPTH-----------DTIVRLT 420 (470)
Q Consensus 358 ~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~l~~~Gv~----~~~~~-----------~~~iR~~ 420 (470)
.++|+++..++...+...+.+...+.+.+..-.. ..+...+...|+.+||. +.+.+ ..++-++
T Consensus 288 ~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~A 367 (389)
T PF05889_consen 288 KERLKKWAEEVGERLLETPRNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAA 367 (389)
T ss_dssp HHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEE
T ss_pred HHHHHHHHHHhhhhhcCCCCCCeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHH
Confidence 8999988877542333333444445555542110 12567889999999775 22221 2788887
Q ss_pred cCCCCCHHHHHHHHHHHHHHHh
Q 012138 421 PPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 421 ~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
-.+.+++|||+.++++|+++++
T Consensus 368 saiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 368 SAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp E-TT--HHHHHHHHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHHhC
Confidence 7889999999999999999875
No 384
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.55 E-value=2.3e-05 Score=84.20 Aligned_cols=273 Identities=14% Similarity=0.132 Sum_probs=153.6
Q ss_pred HHHHHHHhhhhCCC--eEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCC
Q 012138 120 PVFAERLTSMFGYD--MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFG 197 (470)
Q Consensus 120 ~~l~~~l~~~~~~~--~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~ 197 (470)
-++...+++++|++ ..-+...+|.+-|+++ ++.++ +++ .++++++.+.. |-.+...+..-...
T Consensus 127 ~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~-ma~~~--~~~----k~~~~~v~~~~-hP~~~~v~~t~~~~------- 191 (954)
T PRK12566 127 LNFQQMTIDLTGLDLANASLLDEATAAAEAMA-LAKRV--AKS----KSNRFFVDEHC-HPQTLSVLRTRAEG------- 191 (954)
T ss_pred HHHHHHHHHHhCchhhhhhhccchhHHHHHHH-HHHHH--hhc----CCCEEEECCCC-CHHHHHHHHHhhhc-------
Confidence 35666788888887 4466667777766444 34432 111 13456555544 54444332211110
Q ss_pred CCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcc
Q 012138 198 PLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML 277 (470)
Q Consensus 198 ~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~ 277 (470)
.+ ..+ -.+++++.+.+ ++.+|++.. .|-.|.+.+ +++|.++++++|+++|+-----.++- +-
T Consensus 192 ---~g-~~i---~~~~~~~~~~~---~~~~v~vq~-P~~~G~i~d----~~~i~~~~h~~gal~~~~~d~laL~l---l~ 253 (954)
T PRK12566 192 ---FG-FEL---VVDAVDNLAAH---AVFGALLQY-PDTHGEIRD----LRPLIDQLHGQQALACVAADLLSLLV---LT 253 (954)
T ss_pred ---CC-cEE---EEcchhhcCCC---CEEEEEEEC-CCCceEEcc----HHHHHHHHHHcCCEEEEEeCHHHHhC---CC
Confidence 00 111 12445554443 688998866 456898886 99999999999998774211101111 10
Q ss_pred ccccCCCCccee-----ecccccc-CCCcceeEEEecHHHHhhcCcCC----------------------------ccCC
Q 012138 278 ASDWEEVRPDMV-----ILGKALG-GGVIPVSAVLADKEVMLCIQPGE----------------------------HGST 323 (470)
Q Consensus 278 ~~~~~~~~pdi~-----s~sK~l~-gG~~~ig~v~~~~~~~~~~~~~~----------------------------~~~t 323 (470)
.-..+| .||+ .|+-.++ ||- ..|++.+++++...+.... ..+.
T Consensus 254 ~Pge~G--ADI~vG~~Q~fGvp~~~GGP-~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSN 330 (954)
T PRK12566 254 PPGELG--ADVVLGSTQRFGVPMGYGGP-HAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSN 330 (954)
T ss_pred ChhhcC--CcEEeeCCCcCCCCCCCCCC-CeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccch
Confidence 111223 2664 3444444 665 6888888888777663210 1122
Q ss_pred CCCCHHHHHHHHHHH-HHHhhhh---HHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHH
Q 012138 324 FGGNPLASAVAIASL-DVIRDEK---LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDIC 399 (470)
Q Consensus 324 ~~~~~~~~aaa~a~l-~~~~~~~---~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 399 (470)
.+.+...+|.+.+.. -++..+. +.++...+..++.+.|.+.+.+ ... ...|--+.+.... .+.++.
T Consensus 331 ICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g~~------~~~-~~fF~~~~v~~~~---~~~~~~ 400 (954)
T PRK12566 331 ICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAKGIK------RLN-RHFFDTLTLEVGG---AQAAII 400 (954)
T ss_pred hhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCc------ccc-CCccceEEEEccC---CHHHHH
Confidence 223333333222222 2233333 4445666777888888774322 111 1233333333321 467788
Q ss_pred HHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHH
Q 012138 400 LKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALH 438 (470)
Q Consensus 400 ~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~ 438 (470)
++..++|+-+.-.+.+.+.+++--.+|++|++.+++++.
T Consensus 401 ~~a~~~~~n~r~~~~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 401 ESAEAARINLRILGRGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred HHHHHCCCeeEEeCCCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 899999998877667889999888999999999999985
No 385
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.52 E-value=4.3e-06 Score=78.65 Aligned_cols=279 Identities=13% Similarity=0.106 Sum_probs=141.6
Q ss_pred HHHHHHHHhhhh---C-----CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCc
Q 012138 119 FPVFAERLTSMF---G-----YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDN 190 (470)
Q Consensus 119 ~~~l~~~l~~~~---~-----~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~ 190 (470)
..+|++.|.++. | -..|+|.+|.|+.+++|+-++... ... +.....||+..|-|......+--+.. .
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~-~~~---~~~p~~VVa~aPYY~~Y~~qt~~f~s-~ 119 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPN-ASP---SSSPASVVAAAPYYSSYPEQTDFFDS-R 119 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHH-T-T---TSSSEEEEE-SS--CHHHHHCCCT-B-T
T ss_pred cHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCC-CCC---CCCCceeEecCCCccchHHHHHhccc-c
Confidence 456666666654 3 235889999999998888766431 001 12334677766655322211110000 0
Q ss_pred ccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCC
Q 012138 191 EAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 270 (470)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~ 270 (470)
.+++ .= |...... ++.+...-=+++.| |||.|.+-- .+++.-+..+|.|-+|-.-
T Consensus 120 ~y~w----------~G---da~~~~~--~~~~~~~IElVTSP-NNPDG~lr~---------~V~~g~~~k~I~D~AYYWP 174 (363)
T PF04864_consen 120 LYKW----------AG---DASNFKN--SDNPSPYIELVTSP-NNPDGQLRE---------AVLNGSSGKVIHDLAYYWP 174 (363)
T ss_dssp TEEE----------EE---ECCCGTT---S-CCGEEEEEESS--TTT---------------SSTTTEEEEEEE-TT-ST
T ss_pred Cccc----------cc---cHHhhcc--CCCCCCeEEEEeCC-CCCcccccc---------hhcCCCCcceeeeeeeecc
Confidence 0100 00 1111110 01112344455666 999998652 3456667788999988632
Q ss_pred cccCCccccccCCCCccee--ecccccc-CCCcceeEEEec-HHHHhhcCcCCccCCCCCCHHHHHHHHHHHHHHhh---
Q 012138 271 ARSGRMLASDWEEVRPDMV--ILGKALG-GGVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--- 343 (470)
Q Consensus 271 g~~G~~~~~~~~~~~pdi~--s~sK~l~-gG~~~ig~v~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--- 343 (470)
-++. +.. -.+-|++ |+||.-| +|- |+||.+.+ +++.+++......+|.+.+-=++.-+...|+.+.+
T Consensus 175 hyTp----I~~-~aD~DiMLFT~SK~TGHAGS-R~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~ 248 (363)
T PF04864_consen 175 HYTP----ITA-PADHDIMLFTLSKLTGHAGS-RFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYG 248 (363)
T ss_dssp TTS-------S--B--SEEEEEHHHHCS-GGG--EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCC
T ss_pred cccc----cCC-CCCCceEEEEEecccCcccc-ccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhccc
Confidence 1221 111 1123655 8889887 787 99998864 56777776666667777777777777777776543
Q ss_pred -h----hHHHHHHH-HHHHHHHHHHHHHhhC--------CC----ce-EEEeccceeEEEEeccCCCchhHHHHHHHHHH
Q 012138 344 -E----KLAERSAH-LGEELRQHLFKIQQQF--------PN----YV-KEVRGRGLFNAVEFDKTALPVSAYDICLKMKE 404 (470)
Q Consensus 344 -~----~~~~~~~~-~~~~l~~~L~~l~~~~--------p~----~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~ 404 (470)
+ ++.+-.++ +.++. +.|+++.... ++ +. ....+.+.|.++.+...+ ..+....|++
T Consensus 249 ~~~~~~~~F~f~~~~M~~RW-~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~ee----d~DC~~~l~~ 323 (363)
T PF04864_consen 249 TEKGTEDIFHFGYSTMRERW-EKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREE----DEDCYAVLRE 323 (363)
T ss_dssp HHTTTTSHHHHHHHHHHHHH-HHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCG----GSSHHHHHHC
T ss_pred CCCCccchHHHHHHHHHHHH-HHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCcc----cccHHHHHHh
Confidence 1 23332222 22222 2333332211 10 11 123445777777776432 2456667777
Q ss_pred cCceeccC-----CCCEEEEecCCCCCHHHHHHHHHHHHHH
Q 012138 405 RGILAKPT-----HDTIVRLTPPLSISSNELQEGSKALHDV 440 (470)
Q Consensus 405 ~Gv~~~~~-----~~~~iR~~~~~~~t~e~i~~~~~~l~~~ 440 (470)
.||+...| +..++|++ +..++++.+.++++|...
T Consensus 324 ~~I~tr~G~~fga~~ryVRlS--ml~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 324 AKIITRSGVLFGADSRYVRLS--MLKRDDDFDQLLERLSKL 362 (363)
T ss_dssp TTEEEEEGGGGTS-TTEEEEE--SSS-HHHHHHHHHHHHCC
T ss_pred CCcccCCCCccCCCCCeEEEe--ccCCHHHHHHHHHHHHhh
Confidence 79987654 47899999 889999999999999753
No 386
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.50 E-value=1.9e-05 Score=74.82 Aligned_cols=196 Identities=17% Similarity=0.155 Sum_probs=119.6
Q ss_pred eEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCCCCcceeecc--ccccCCCcce
Q 012138 225 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGGGVIPV 302 (470)
Q Consensus 225 ~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~s--K~l~gG~~~i 302 (470)
.+-|...+-..-+|+-+|...+ +.. +.++++|-.-.-|++. ..+. .-|++.+| |.+|+- .+
T Consensus 145 ~ayv~~~~NeTi~Gv~v~~~p~------~~~--~~~~v~D~SS~ilsr~---iDvs----k~dviyagaQKnlGpa--Gl 207 (365)
T COG1932 145 DAYVHFCWNETISGVEVPELPD------IGS--DGLLVADASSAILSRP---IDVS----KYDVIYAGAQKNLGPA--GL 207 (365)
T ss_pred ccEEEEecCCcccceEccCCCC------CCC--CceEEEecccHHhcCC---CChh----HcceEEEehhhccCcc--ce
Confidence 3335554523345777752121 111 2788999654423222 1122 23677776 888852 46
Q ss_pred eEEEecHHHHhhcCcC------------CccCCCCCCHH-HHHHHHHHHHHHhh----hhHHHHHHHHHHHHHHHHHHHH
Q 012138 303 SAVLADKEVMLCIQPG------------EHGSTFGGNPL-ASAVAIASLDVIRD----EKLAERSAHLGEELRQHLFKIQ 365 (470)
Q Consensus 303 g~v~~~~~~~~~~~~~------------~~~~t~~~~~~-~~aaa~a~l~~~~~----~~~~~~~~~~~~~l~~~L~~l~ 365 (470)
+.++.++++.++.+.. ..+++|+.+|. +.....-+++++.. +.+.++.+++.+.|.+.+.+-.
T Consensus 208 tvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~ 287 (365)
T COG1932 208 TVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSD 287 (365)
T ss_pred EEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 7888999999887553 34667775544 55556667888876 5577777777777777776531
Q ss_pred hhCCCceEEEeccceeEE-EEeccCCCchhHHHHHHHHHHcCceeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 366 QQFPNYVKEVRGRGLFNA-VEFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 366 ~~~p~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~--~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
.-.+ .+.. ..+..|.. +.+... .-...|..++.++|+....++ .+-+|.+.--.++.|+++.+++-++.+.+
T Consensus 288 fy~~-~v~~-~~RS~mnV~f~~~~~---~ld~~fv~eae~~gl~~lkGhr~vgGmRasiynA~~~e~veaL~~fm~~f~~ 362 (365)
T COG1932 288 FYRN-LVAK-ANRSRMNVTFTLVDA---ELDKGFVAEAEAAGLIYLKGHRSVGGLRASIYNAVPLEDVEALTDFMDWFEE 362 (365)
T ss_pred cccc-ccch-hhccceeEEEEcCcH---HHHHHHHHHHHHcCCceeccccCCCceeeeeecCCCHHHHHHHHHHHHHHHH
Confidence 1111 1211 22333332 223332 245678888889988776553 34499998888999999999999988876
No 387
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.24 E-value=8.8e-05 Score=68.50 Aligned_cols=277 Identities=12% Similarity=0.160 Sum_probs=148.7
Q ss_pred ecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHH
Q 012138 137 PMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEK 216 (470)
Q Consensus 137 ~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~ 216 (470)
-+-|||.|+..+-..+..+- +++.|-+..|++..+.......+-.......| ...+...+ |++-+-.
T Consensus 104 QslsGTGAl~~~A~Fl~~~~--------~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~y--Wd~~~k~~---d~e~~Ls 170 (410)
T KOG1412|consen 104 QSLSGTGALRIAADFLATFY--------NKNTVYVSNPTWENHHAIFEKAGFTTVATYPY--WDAENKCV---DLEGFLS 170 (410)
T ss_pred eeccccchhhhhHHHHHHhc--------ccceeEecCCchhHHHHHHHHcCCceeeeeee--ecCCCcee---cHHHHHH
Confidence 44578999988888665531 34456556666522221111111000000000 00112223 6666666
Q ss_pred HHHhcCCCeEEEEEcc-ccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCc----cccccC---CCCcce
Q 012138 217 IFKESGDQIAGFLFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM----LASDWE---EVRPDM 288 (470)
Q Consensus 217 ~l~~~~~~~~~vi~ep-i~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~----~~~~~~---~~~pdi 288 (470)
.|+..+.. ..|++.. -+||||.-+ +++.+.+|.+.-++.+.+-+.|-+|.||. .|.. |+..++ |.. =+
T Consensus 171 dl~~APe~-si~iLhaCAhNPTGmDP-T~EQW~qia~vik~k~lf~fFDiAYQGfA-SGD~~~DawAiR~fV~~g~e-~f 246 (410)
T KOG1412|consen 171 DLESAPEG-SIIILHACAHNPTGMDP-TREQWKQIADVIKSKNLFPFFDIAYQGFA-SGDLDADAWAIRYFVEQGFE-LF 246 (410)
T ss_pred HHhhCCCC-cEEeeeccccCCCCCCC-CHHHHHHHHHHHHhcCceeeeehhhcccc-cCCccccHHHHHHHHhcCCe-EE
Confidence 66654332 3444544 599999877 99999999999999999999999999984 4433 333221 221 12
Q ss_pred e--ecccccc-CCCcceeE---EEecHHHHhhcCcC---CccCCCC-CCHHHHHHHHHHHHHHh--h------hhHHHHH
Q 012138 289 V--ILGKALG-GGVIPVSA---VLADKEVMLCIQPG---EHGSTFG-GNPLASAVAIASLDVIR--D------EKLAERS 350 (470)
Q Consensus 289 ~--s~sK~l~-gG~~~ig~---v~~~~~~~~~~~~~---~~~~t~~-~~~~~~aaa~a~l~~~~--~------~~~~~~~ 350 (470)
+ +|+|.+| -+- |+|. ++-++.++..+... ..-++++ ++..++......|..-+ + ..+..++
T Consensus 247 v~QSFaKNfGlYne-RvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI 325 (410)
T KOG1412|consen 247 VCQSFAKNFGLYNE-RVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRI 325 (410)
T ss_pred EEhhhhhhcccccc-cccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 2 8999888 232 5553 34455555444321 1223444 33334444444443211 1 2344455
Q ss_pred HHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHHHHHc-CceeccCCCCEEEEecCCCCCHHH
Q 012138 351 AHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPTHDTIVRLTPPLSISSNE 429 (470)
Q Consensus 351 ~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~~~iR~~~~~~~t~e~ 429 (470)
++++..|++.|.+|+. |+....+..+-.|+.+. . ..... ++.|.++ .|++.+.+ |++++ ......
T Consensus 326 ~~MR~aLrd~L~aL~T--PGtWDHI~~QiGMFSyT-G-----Ltp~q-V~~li~~h~vyLl~~G----RInis-GLN~~N 391 (410)
T KOG1412|consen 326 KKMRTALRDHLVALKT--PGTWDHITQQIGMFSYT-G-----LTPAQ-VDHLIENHKVYLLSDG----RINIS-GLNMKN 391 (410)
T ss_pred HHHHHHHHHHHHhcCC--CCcHHHHHhhccceeec-C-----CCHHH-HHHHHHhceEEEecCC----cEeee-cccccc
Confidence 6666666666666543 12222222333344441 1 23433 4555555 77776543 45443 345568
Q ss_pred HHHHHHHHHHHHhcccC
Q 012138 430 LQEGSKALHDVLELDLP 446 (470)
Q Consensus 430 i~~~~~~l~~~l~~~~~ 446 (470)
++....+|.+.++ .+.
T Consensus 392 veyVAkAIde~Vr-~~~ 407 (410)
T KOG1412|consen 392 VEYVAKAIDETVR-AIK 407 (410)
T ss_pred HHHHHHHHHHHHH-hhc
Confidence 9999999999887 653
No 388
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.23 E-value=0.00011 Score=67.56 Aligned_cols=175 Identities=14% Similarity=0.184 Sum_probs=104.7
Q ss_pred HHHHHHHHhhhhCCCeEEe---cCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEc-cCccccccchhcccCC-----
Q 012138 119 FPVFAERLTSMFGYDMVLP---MNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCC-GCFHGRTLAAISMSCD----- 189 (470)
Q Consensus 119 ~~~l~~~l~~~~~~~~v~~---~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~-~~yhg~~~~~~~~~~~----- 189 (470)
+..|++-.++.++.+..++ .-|||.|+..||--.++ ||| .++... ..|. .....+.+.+.
T Consensus 67 RdtLe~vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~LR---------pgD-ell~i~G~PYD-TLeevIG~rg~~~gSL 135 (416)
T COG4100 67 RDTLERVYAQVFGAEAALVRPQIISGTHAIACALFGILR---------PGD-ELLYITGSPYD-TLEEVIGLRGEGQGSL 135 (416)
T ss_pred hhHHHHHHHHHhccccceeeeeeecchhHHHHHHHhccC---------CCC-eEEEecCCcch-hHHHHhccCCCCcccH
Confidence 7788888999998764322 23789999999987766 677 444433 3331 11111111111
Q ss_pred cccccCC--CCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhc--CcEEEEec
Q 012138 190 NEAIRGF--GPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY--NILMIADE 265 (470)
Q Consensus 190 ~~~~~~~--~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~--gillI~De 265 (470)
..+...| .++.++ ..+ |.+.++..+++ +|++|.+.---+-.-.---+-.++++++++.++- ++++.+|.
T Consensus 136 ~dfgi~Y~~v~Lt~~-gki---D~~~v~~~i~~---~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDN 208 (416)
T COG4100 136 KDFGIKYKAVPLTAD-GKI---DIQAVKTAISD---RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDN 208 (416)
T ss_pred HHhCcceeecccccC-Ccc---cHHHHHHhcCc---cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEec
Confidence 0111111 111111 122 78899988886 8999887552221111111455678888888774 68999999
Q ss_pred cccCCcccCCccccccCCCCccee--eccccccCCCcce-eEEEecHHHHhhcC
Q 012138 266 IQSGLARSGRMLASDWEEVRPDMV--ILGKALGGGVIPV-SAVLADKEVMLCIQ 316 (470)
Q Consensus 266 v~~g~g~~G~~~~~~~~~~~pdi~--s~sK~l~gG~~~i-g~v~~~~~~~~~~~ 316 (470)
+|..|... .+...+..|++ |+-|..+||+... |++.+++++.+...
T Consensus 209 CYGEFvE~-----~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~~ 257 (416)
T COG4100 209 CYGEFVEE-----KEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAAA 257 (416)
T ss_pred cchhhhhc-----cCccccchhhhccceeeCCCCceeeccceeechHHHHHhhc
Confidence 99887544 22233445766 7889988876444 45778888887653
No 389
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.13 E-value=0.00036 Score=67.32 Aligned_cols=304 Identities=15% Similarity=0.120 Sum_probs=155.7
Q ss_pred HHHHHHhhhhCCC---eEEecCChhHHHHHHHHHHHHhchh---cccCCCCCcEEEEEccCccccccchhcccCCccccc
Q 012138 121 VFAERLTSMFGYD---MVLPMNTGAEGVETALKLARKWGYV---KKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIR 194 (470)
Q Consensus 121 ~l~~~l~~~~~~~---~v~~~~sGteA~~~al~~~~~~~~~---~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~ 194 (470)
++-.++.+..|++ .=+|++||+-+|..++.+++--.+- .+|...=...|+..+..-|-+...+...-+-..
T Consensus 145 ~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gt--- 221 (510)
T KOG0629|consen 145 EVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGT--- 221 (510)
T ss_pred HHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCC---
Confidence 4444555555543 4689999999999999988742111 111100112444433333555443333222100
Q ss_pred CCCCCCCCeeeecCC-----CHHHHHHHHHhcCCC--eEEEE-EccccCCCccccCChhhHHHHHHHHHhcCcEEEEecc
Q 012138 195 GFGPLLPGHLKVDFG-----DITALEKIFKESGDQ--IAGFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 266 (470)
Q Consensus 195 ~~~~~~~~~~~~~~~-----d~~~Le~~l~~~~~~--~~~vi-~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev 266 (470)
..+..++.+ ++++||+.|.+...+ +..++ ++.-..--|..-| |..|+++|++|++++++|.+
T Consensus 222 ------d~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDd----L~~iadiC~k~~lWmHvDAA 291 (510)
T KOG0629|consen 222 ------DHCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDD----LNGIADICEKHKLWMHVDAA 291 (510)
T ss_pred ------ceeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCc----HHHHHHHHHhcCEEEEeecc
Confidence 112233332 689999999764322 22333 4332333477777 99999999999999999999
Q ss_pred ccC-CcccCCccccccCCCC-cceeecc--ccccCCCcceeEEEecHHH-HhhcCcCCccCC----------C-CCCH-H
Q 012138 267 QSG-LARSGRMLASDWEEVR-PDMVILG--KALGGGVIPVSAVLADKEV-MLCIQPGEHGST----------F-GGNP-L 329 (470)
Q Consensus 267 ~~g-~g~~G~~~~~~~~~~~-pdi~s~s--K~l~gG~~~ig~v~~~~~~-~~~~~~~~~~~t----------~-~~~~-~ 329 (470)
..| +- ..+..-+...|+. .|-++.. |-++.++ +.++.+.+.+- ...........- | ++.- +
T Consensus 292 wGGglL-mS~k~R~kl~Giera~SvtwnpHK~~gapl-qCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~i 369 (510)
T KOG0629|consen 292 WGGGLL-MSRKHRHKLTGIERANSVTWNPHKLMGAPL-QCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAI 369 (510)
T ss_pred cccccc-cChhhHhhccCccccCceeecHHHhhcCcc-hhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchh
Confidence 885 21 1111111222443 3444443 7788777 88887766543 222221110000 0 1111 1
Q ss_pred HHHHHHHHHH---HHhh------hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecc-ceeEEEEeccCC--C------
Q 012138 330 ASAVAIASLD---VIRD------EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGR-GLFNAVEFDKTA--L------ 391 (470)
Q Consensus 330 ~~aaa~a~l~---~~~~------~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~-g~~~~~~~~~~~--~------ 391 (470)
.|--=.-.++ .+.. +...+++-++++++.++|++..... .+....++ -.+..|.++..- .
T Consensus 370 QCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~--~l~~~~pe~~nv~fw~vp~~lR~~~~~~e~ 447 (510)
T KOG0629|consen 370 QCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFE--MLFELEPEHVNVCFWYVPPSLRGWQENPER 447 (510)
T ss_pred hcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccce--ehhcCCCceEEEeeccCchHhccCcccchh
Confidence 1110000111 1111 4456677788999999988753211 11111122 122222111100 0
Q ss_pred ----chhHHHHHHHHHHcCceec---cC--CCCEEEEec-CCCCCHHHHHHHHHHHHHHH
Q 012138 392 ----PVSAYDICLKMKERGILAK---PT--HDTIVRLTP-PLSISSNELQEGSKALHDVL 441 (470)
Q Consensus 392 ----~~~~~~~~~~l~~~Gv~~~---~~--~~~~iR~~~-~~~~t~e~i~~~~~~l~~~l 441 (470)
..-+-.+-.+|.++|-... |. .++++|+.. +...+.++++.+++.|...=
T Consensus 448 ~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerlg 507 (510)
T KOG0629|consen 448 DSRLVKVAPKIKERMMKKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERLG 507 (510)
T ss_pred hhHHHhhCcHHHHHHHhccceeeEecccccccchhheecccchhhhhhHHHHHHHHHHhc
Confidence 0112245567888886643 32 267888643 23678999999999887653
No 390
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.09 E-value=0.0004 Score=67.67 Aligned_cols=311 Identities=16% Similarity=0.124 Sum_probs=154.4
Q ss_pred HHHHHHhhhhCCCe-----------EEecCChhHHHHHHHHHHHHhchhccc-CCC-------CCcEEEEEccCcccccc
Q 012138 121 VFAERLTSMFGYDM-----------VLPMNTGAEGVETALKLARKWGYVKKK-FSI-------DEAIIVSCCGCFHGRTL 181 (470)
Q Consensus 121 ~l~~~l~~~~~~~~-----------v~~~~sGteA~~~al~~~~~~~~~~~~-~~~-------g~~~ii~~~~~yhg~~~ 181 (470)
-..+||.++++... =++..|++|++..++.+++.-...+-+ .+| ..+-|+.++..-|.+.-
T Consensus 117 ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahssve 196 (511)
T KOG0628|consen 117 IVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYCSDQAHSSVE 196 (511)
T ss_pred HHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEecCcccchHH
Confidence 34467777664321 234456789999999888752111111 010 11233334444455544
Q ss_pred chhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcC--CCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCc
Q 012138 182 AAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG--DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNI 259 (470)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~--~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gi 259 (470)
.+..+.+-. . ...+... ...+ ..+.|+++|++.. +-+..+++-. .+.||.. .-+.+.+|..+|+++|+
T Consensus 197 ka~~i~~Vk-l--R~l~td~-n~~m---r~~~L~~AIe~D~arGlIPf~v~at-~GTT~~c--a~D~l~elg~Vc~~~gl 266 (511)
T KOG0628|consen 197 KACLIAGVK-L--RALPTDE-NFGM---RGDTLRKAIEEDIARGLIPFFVCAT-LGTTSSC--AFDELEELGPVCREEGL 266 (511)
T ss_pred HhHhhccee-E--EEeeccc-CcCC---CHHHHHHHHHHHHhCCCccEEEEEe-ecCcccc--ccccHHHhcchhhhcCE
Confidence 333333211 0 0001000 1122 5788999997632 3355666655 5666655 55679999999999999
Q ss_pred EEEEeccccCCcccCCccccccCCCC-ccee--ecccccc-----------CCCcceeEEE-ecHHHHhhcCcCCccCCC
Q 012138 260 LMIADEIQSGLARSGRMLASDWEEVR-PDMV--ILGKALG-----------GGVIPVSAVL-ADKEVMLCIQPGEHGSTF 324 (470)
Q Consensus 260 llI~Dev~~g~g~~G~~~~~~~~~~~-pdi~--s~sK~l~-----------gG~~~ig~v~-~~~~~~~~~~~~~~~~t~ 324 (470)
+|.+|.+|+|-...-+.+..-.-|+. .|-. ..+|.+- .|. .+.-.. +++...+.-.... ...|
T Consensus 267 WLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~-~~~~~~~vdp~yL~h~~~~~-~~Dy 344 (511)
T KOG0628|consen 267 WLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGT-KLSRAFNVDPLYLKHAYQGS-APDY 344 (511)
T ss_pred EEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCc-eeeeeeecChHhhcchhhcc-CCCc
Confidence 99999999962111000000000111 1111 1233322 343 333222 2332222111110 1111
Q ss_pred --CCCHHH----HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCc-eEEEeccceeEEEEeccCCCchhHHH
Q 012138 325 --GGNPLA----SAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNY-VKEVRGRGLFNAVEFDKTALPVSAYD 397 (470)
Q Consensus 325 --~~~~~~----~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~p~~-~~~~~~~g~~~~~~~~~~~~~~~~~~ 397 (470)
-.-|++ ..-.+-.++.+.-+++++++++..+ |.+....+...-|.+ +...+-.|+ +.+.+..++ ....+
T Consensus 345 rhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~-La~~fe~lv~~d~~FE~~~~~~lgL-vcFRlk~~N--~~ne~ 420 (511)
T KOG0628|consen 345 RHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVR-LAKEFETLVRADPRFEIVNKRILGL-VCFRLKGDN--EINEA 420 (511)
T ss_pred cccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHH-HHHHHHHHhhcCCcceeecccccce-eEEeecCCc--HHHHH
Confidence 111221 1222334454555667666665433 334444443332211 112223343 444454433 36677
Q ss_pred HHHHHHHc-CceeccC---CCCEEEEecCC-CCCHHHHHHHHHHHHHHHhcccCCC
Q 012138 398 ICLKMKER-GILAKPT---HDTIVRLTPPL-SISSNELQEGSKALHDVLELDLPKM 448 (470)
Q Consensus 398 ~~~~l~~~-Gv~~~~~---~~~~iR~~~~~-~~t~e~i~~~~~~l~~~l~~~~~~~ 448 (470)
+.+++-.. .|.+.|. +.-.+|+++.. ..+++++++..+.|.+... ++.+.
T Consensus 421 Ll~~in~~g~i~l~~~~l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~-~l~~~ 475 (511)
T KOG0628|consen 421 LLNRLNSSGRIHLVPASLHGKFVLRFAVCSPLTNESDIDEAWKIIFEAAD-ELFEA 475 (511)
T ss_pred HHHHHHhcCcEEEEEeeecceEEEEEEecCCCCcHHHHHHHHHHHHHHHH-HHHhh
Confidence 88888777 5666654 35578998643 4678899999999999888 65443
No 391
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=97.78 E-value=0.00049 Score=64.65 Aligned_cols=270 Identities=15% Similarity=0.138 Sum_probs=136.9
Q ss_pred CeEEe--cCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCC-
Q 012138 133 DMVLP--MNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG- 209 (470)
Q Consensus 133 ~~v~~--~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 209 (470)
+++++ +-|||-|+..+-..+.++. ++ ..|.+.+|++ |.........+-+ +..++|-
T Consensus 119 ~Ri~tvQ~lSGTGaLriga~Fl~~f~-------~~-~~I~ip~PTW-gNh~~if~~ag~~------------~~~yrYyd 177 (427)
T KOG1411|consen 119 KRIVTVQTLSGTGALRVGAEFLARFY-------PS-RDIYIPDPTW-GNHKNIFKDAGLP------------VKFYRYYD 177 (427)
T ss_pred cceeEEEeccCcchhhHHHHHHHhhc-------cc-cceeecCCcc-cccCccccccCcc------------eeeeeecc
Confidence 35544 3578888877777555542 33 3777788885 2211111111110 1223322
Q ss_pred ------CHHHHHHHHHhcCCCeEEEEEcc-ccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCcc----c
Q 012138 210 ------DITALEKIFKESGDQIAGFLFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML----A 278 (470)
Q Consensus 210 ------d~~~Le~~l~~~~~~~~~vi~ep-i~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~----~ 278 (470)
|.+-+-+-+.+.++. ..|++.. -+||||+-. +.+.+++|.++-++.+.+-++|-+|.||. .|... +
T Consensus 178 ~~t~gld~~g~ledl~~~p~g-s~ilLhaCaHNPTGvDP-t~eqw~ki~~~~~~k~~~pffDmAYQGfa-SG~~d~DA~a 254 (427)
T KOG1411|consen 178 PKTRGLDFKGMLEDLGEAPEG-SIILLHACAHNPTGVDP-TKEQWEKISDLIKEKNLLPFFDMAYQGFA-SGDLDKDAQA 254 (427)
T ss_pred ccccccchHHHHHHHhcCCCC-cEEEeehhhcCCCCCCc-cHHHHHHHHHHhhhccccchhhhhhcccc-cCCchhhHHH
Confidence 444333333333222 3455555 799999877 99999999999999999999999999983 44432 1
Q ss_pred cc---cCCCCcce-eecccccc-CCCcceeE---EEecHHHHhhcCcC---CccCCCCCCHH-HHHHHHHHHHH--H---
Q 012138 279 SD---WEEVRPDM-VILGKALG-GGVIPVSA---VLADKEVMLCIQPG---EHGSTFGGNPL-ASAVAIASLDV--I--- 341 (470)
Q Consensus 279 ~~---~~~~~pdi-~s~sK~l~-gG~~~ig~---v~~~~~~~~~~~~~---~~~~t~~~~~~-~~aaa~a~l~~--~--- 341 (470)
.. ..|...-+ -+|+|.+| =|- |+|+ ++-+.+...+.... .....|+.+|+ ++..+...|.. +
T Consensus 255 vR~F~~~g~~~~laQSyAKNMGLYgE-RvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~ 333 (427)
T KOG1411|consen 255 VRLFVEDGHEILLAQSYAKNMGLYGE-RVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQ 333 (427)
T ss_pred HHHHHHcCCceEeehhhhhhcchhhh-ccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHH
Confidence 11 11221111 28899988 222 5555 34444444433211 11223343333 22222222221 1
Q ss_pred --hh-hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEE-eccceeEEEEeccCCCchhHHHHHHHHHH-cCceeccCCCCE
Q 012138 342 --RD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDICLKMKE-RGILAKPTHDTI 416 (470)
Q Consensus 342 --~~-~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~~ 416 (470)
.+ +.+.+++..++..|.+.|+...... ....+ ...|. +.+. . .+.+. ++.|.+ ..|+.... +
T Consensus 334 W~~evk~MadRi~~mR~~L~d~L~~~gs~~--~W~hI~~QIGM-F~fT-g-----l~peQ-v~~l~ke~~iYmT~d--G- 400 (427)
T KOG1411|consen 334 WLGEVKGMADRIISMRQQLFDALEKEGSPG--NWSHITKQIGM-FCFT-G-----LNPEQ-VDWLTKEYHIYLTKD--G- 400 (427)
T ss_pred HHHHHHHHHHhhhhhHHHHhHHhhcCCCCc--cHHHHHHhhhe-eeec-C-----CCHHH-HHHHHhhheeeeccC--c-
Confidence 11 2344455555555555554432211 01111 22343 3331 1 23343 445544 47776532 2
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 417 VRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 417 iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
|++.+- .+...+..+.++|.++.+
T Consensus 401 -RiS~aG-~ss~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 401 -RISMAG-LSSSNVPYLADAIHAVTK 424 (427)
T ss_pred -eEeecc-ccccCCcccchhhHhHhc
Confidence 666543 455678888888877655
No 392
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=96.91 E-value=0.14 Score=52.61 Aligned_cols=263 Identities=17% Similarity=0.275 Sum_probs=138.3
Q ss_pred HhhhhCCC--eEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCe
Q 012138 126 LTSMFGYD--MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGH 203 (470)
Q Consensus 126 l~~~~~~~--~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (470)
++++.|.+ ..-+..-||.|-|+.....+. ..++++++...+ |-.+...+.....+ + +
T Consensus 172 i~dlTGL~~aNASLLDEgTAaaEAm~l~~~~---------~krkk~vvd~~~-hpqtlsV~~TRa~~-~----~------ 230 (1001)
T KOG2040|consen 172 ITDLTGLPMANASLLDEGTAAAEAMALCNRI---------NKRKKFVVDSNC-HPQTLSVVKTRAKG-F----G------ 230 (1001)
T ss_pred hhhccCCcccchhhhccchhHHHHHHHHHhh---------cccceEEecCCC-Ccchhhhhhccccc-c----c------
Confidence 44555643 455556677777665544443 123355555544 77666655433221 1 1
Q ss_pred eeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccC---CcccCCccccc
Q 012138 204 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG---LARSGRMLASD 280 (470)
Q Consensus 204 ~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g---~g~~G~~~~~~ 280 (470)
..+...|+++... ...++..+++.. .+..|.+.+ +.++++.+++.|.++++---.-. +-..|
T Consensus 231 i~v~~~~~~~~~~----s~~~v~gvlvQY-P~t~G~i~d----~~el~~~a~~~~s~vv~atDLLaLtiLrpPg------ 295 (1001)
T KOG2040|consen 231 IKVVVSDIKEADY----SSKDVSGVLVQY-PDTEGSVLD----FDELVELAHANGSLVVMATDLLALTILRPPG------ 295 (1001)
T ss_pred eeEEecCHHHhhc----cccceeEEEEEc-CCCCCcccC----HHHHHHHhhccCceEEEeehhhHHHccCChh------
Confidence 1121114433221 123688888877 556788887 99999999999988765311100 11112
Q ss_pred cCCCCcceee-----cccccc-CCCcceeEEEecHHHHhhcCcCCc-cCC------------------------CCCCHH
Q 012138 281 WEEVRPDMVI-----LGKALG-GGVIPVSAVLADKEVMLCIQPGEH-GST------------------------FGGNPL 329 (470)
Q Consensus 281 ~~~~~pdi~s-----~sK~l~-gG~~~ig~v~~~~~~~~~~~~~~~-~~t------------------------~~~~~~ 329 (470)
.+|. ||.+ |+-.+| ||. ..|++.+++++...+ ++.. +-+ -+.|.-
T Consensus 296 efGa--DIavGSsQRFGVPlGYGGP-HAaFfAv~~~l~R~m-PGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNIC 371 (1001)
T KOG2040|consen 296 EFGA--DIAVGSSQRFGVPLGYGGP-HAAFFAVSESLVRMM-PGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNIC 371 (1001)
T ss_pred hcCc--eeeeccccccCccccCCCc-hHHHHHHHHHHHhhC-CCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhh
Confidence 2222 4331 333344 454 445555565555443 2210 000 011222
Q ss_pred HHHHHHHHHHHHh----h----hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeEEEEeccCCCchhHHHHHHH
Q 012138 330 ASAVAIASLDVIR----D----EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLK 401 (470)
Q Consensus 330 ~~aaa~a~l~~~~----~----~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 401 (470)
.+.|.+|-+..+. - +++.+++......|..+|+..+.+. + ....|=.+.+... .+..++.++
T Consensus 372 TAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~aghel---~----~k~fFDTLkI~~~---~s~~~~l~r 441 (1001)
T KOG2040|consen 372 TAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAGHEL---Q----HKPFFDTLKIRCG---CSAEEVLDR 441 (1001)
T ss_pred HHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcchhh---c----cccccceEEEEec---CcHHHHHHH
Confidence 2222222222221 1 3455555666666777776544321 1 1112222222222 267888888
Q ss_pred HHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHH
Q 012138 402 MKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALH 438 (470)
Q Consensus 402 l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~ 438 (470)
..++++-..-..++.+-++.--..+++|++.++..+.
T Consensus 442 A~~~~iNlr~~ed~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 442 AAKRQINLRLVEDGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred HHhhcCceEEeecCceEEeecccccHHHHHHHHHHHc
Confidence 8888887776677888888778899999999999886
No 393
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=96.40 E-value=0.012 Score=50.34 Aligned_cols=55 Identities=9% Similarity=0.019 Sum_probs=44.7
Q ss_pred CCCCcHHHHHHHHhhhhC------CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccc
Q 012138 114 FYNDKFPVFAERLTSMFG------YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHG 178 (470)
Q Consensus 114 ~~~~~~~~l~~~l~~~~~------~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg 178 (470)
...++++++++++.+.++ .++|++|+|+++|++.+++.+.. +|+ .|++..|.|+|
T Consensus 93 G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~d---------pGD-~VlVp~P~Y~~ 153 (153)
T PLN02994 93 GLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIAD---------PGD-AFLVPTPYYAA 153 (153)
T ss_pred CcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcC---------CCC-EEEEeCCCCCC
Confidence 456778899999988755 35799999999999999998865 555 88889999864
No 394
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=95.91 E-value=0.025 Score=51.43 Aligned_cols=54 Identities=22% Similarity=0.334 Sum_probs=39.2
Q ss_pred CHHHHHHHHHhcCCC-eEEEEEcc-ccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc
Q 012138 210 DITALEKIFKESGDQ-IAGFLFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 268 (470)
Q Consensus 210 d~~~Le~~l~~~~~~-~~~vi~ep-i~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~ 268 (470)
|++.+++++++.+++ +-+|.... ...| -+++-+++|..+|..|+++-|+..+|+
T Consensus 142 dleav~~~iee~g~dcilci~sttscfap-----r~pd~leaiaaica~~diphivnnayg 197 (432)
T KOG3843|consen 142 DLEAVEAIIEELGEDCILCIHSTTSCFAP-----RSPDNLEAIAAICAAHDIPHIVNNAYG 197 (432)
T ss_pred hHHHHHHHHHHhCCceEEEEeecccccCC-----CCCchHHHHHHHHHccCchhhhccccc
Confidence 789999999987654 22222111 1222 257789999999999999999999885
No 395
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=67.64 E-value=1.1e+02 Score=29.31 Aligned_cols=100 Identities=16% Similarity=0.185 Sum_probs=56.4
Q ss_pred CCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEE---EccccCCCcccc
Q 012138 165 DEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFL---FEPIQGEAGVII 241 (470)
Q Consensus 165 g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi---~epi~n~~G~~~ 241 (470)
...+++...-+|-|.......+..++.++ ++.....|.+.+.+++++. ++-+|+ .|+ +. .=.+.
T Consensus 26 d~~v~~~DkLTYAgn~~~l~~~~~~~~~~---------fv~~DI~D~~~v~~~~~~~--~~D~VvhfAAES-HV-DRSI~ 92 (340)
T COG1088 26 DDHVVNLDKLTYAGNLENLADVEDSPRYR---------FVQGDICDRELVDRLFKEY--QPDAVVHFAAES-HV-DRSID 92 (340)
T ss_pred CceEEEEecccccCCHHHHHhhhcCCCce---------EEeccccCHHHHHHHHHhc--CCCeEEEechhc-cc-ccccc
Confidence 34467778888888766554444433321 1233344888999999874 333333 444 11 11222
Q ss_pred CChhhHH-------HHHHHHHhcCc-----EEEEeccccCCcccCCcc
Q 012138 242 PPDGYLK-------AVRDLCSKYNI-----LMIADEIQSGLARSGRML 277 (470)
Q Consensus 242 ~~~~~l~-------~l~~l~~~~gi-----llI~Dev~~g~g~~G~~~ 277 (470)
.|..|++ -|.+.+++|.. .+=.||||+.+...+..|
T Consensus 93 ~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~F 140 (340)
T COG1088 93 GPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAF 140 (340)
T ss_pred ChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCc
Confidence 2444443 46778888873 234699999776554433
No 396
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=66.59 E-value=67 Score=30.30 Aligned_cols=177 Identities=13% Similarity=0.078 Sum_probs=90.1
Q ss_pred HhcCcEEEEeccccCCcccCCccccccCCCCcceeeccccccCCCcceeEEEecHHHHhhcCcC-----------CccCC
Q 012138 255 SKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG-----------EHGST 323 (470)
Q Consensus 255 ~~~gillI~Dev~~g~g~~G~~~~~~~~~~~pdi~s~sK~l~gG~~~ig~v~~~~~~~~~~~~~-----------~~~~t 323 (470)
.-+|.++++|=.- .| ..+.+.+..+|+. ...--|.++. ..+-.++.+++++...... ...+-
T Consensus 172 ~~~~~vlVaDmSS-nf--lSrpvDvsk~gvi--~aGAQKN~G~--aG~Tvvivr~dllg~~~~~tP~v~dyk~~~~NnSl 244 (370)
T KOG2790|consen 172 DPKGAVLVADMSS-NF--LSRPVDVSKFGVI--FAGAQKNVGP--AGVTVVIVRKDLLGNALDITPSVLDYKIMDKNNSL 244 (370)
T ss_pred CCCCceEEEeccc-ch--hcCCccchhcceE--EeccccccCc--cccEEEEEehhhhcccccCCccccceeeecccccc
Confidence 4468888888432 22 2222323333221 0112255542 1334566788877654321 12223
Q ss_pred CC-CCHHHHHHHHHHHHHHhh----hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEEeccceeE-EEEeccCCCchhHHH
Q 012138 324 FG-GNPLASAVAIASLDVIRD----EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN-AVEFDKTALPVSAYD 397 (470)
Q Consensus 324 ~~-~~~~~~aaa~a~l~~~~~----~~~~~~~~~~~~~l~~~L~~l~~~~p~~~~~~~~~g~~~-~~~~~~~~~~~~~~~ 397 (470)
|. .+.....+.--.++++.+ ..+.+...+....+.+.+.+-..-|- ...+...+..|. .+.+..+. ...+
T Consensus 245 yNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy~-cpVe~~~RS~MNV~Fri~~d~---Le~e 320 (370)
T KOG2790|consen 245 YNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFYR-CPVEPSVRSRMNVPFRIEKDE---LEAE 320 (370)
T ss_pred ccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCeEE-cccchhhhhhcccceeecchH---HHHH
Confidence 33 333455555556777665 23444445556666666654211110 001112222222 22233332 4456
Q ss_pred HHHHHHHcCceeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 398 ICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 398 ~~~~l~~~Gv~~~~~~--~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
|.+...+++++-..++ -+-+|-+.--.+|-++++.+++-++++.+
T Consensus 321 FLkeA~~~~mv~LKGhRSVGGiRASlYNAisv~~~q~L~~~m~~F~k 367 (370)
T KOG2790|consen 321 FLKEAAKEHMVQLKGHRSVGGIRASLYNAISVEEVQKLAAFMKEFQK 367 (370)
T ss_pred HHHHHHHhhhhccccccccccchhhhhccccHHHHHHHHHHHHHHHH
Confidence 7777777766544443 45688887778899999999999988775
No 397
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=65.43 E-value=13 Score=33.02 Aligned_cols=37 Identities=19% Similarity=0.360 Sum_probs=31.3
Q ss_pred CCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEE
Q 012138 222 GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 222 ~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~ 263 (470)
+-..++||||- .|+.|.... .+++.++|++||+.+|.
T Consensus 154 Gl~Pa~VicEi-~~~dG~mar----~~~~~~fa~~h~l~~it 190 (203)
T COG0108 154 GLKPAGVICEI-MNDDGTMAR----LPELEEFAKEHGLPVIT 190 (203)
T ss_pred CCCCcEEEEEE-eCCCccccC----hHHHHHHHHHcCCcEEE
Confidence 44678999998 677888887 89999999999998875
No 398
>smart00642 Aamy Alpha-amylase domain.
Probab=60.51 E-value=22 Score=30.80 Aligned_cols=57 Identities=16% Similarity=0.201 Sum_probs=38.7
Q ss_pred CHHHHHHHH---HhcCCCeEEEEEccccCCCc-------c----------ccCChhhHHHHHHHHHhcCcEEEEecccc
Q 012138 210 DITALEKIF---KESGDQIAGFLFEPIQGEAG-------V----------IIPPDGYLKAVRDLCSKYNILMIADEIQS 268 (470)
Q Consensus 210 d~~~Le~~l---~~~~~~~~~vi~epi~n~~G-------~----------~~~~~~~l~~l~~l~~~~gillI~Dev~~ 268 (470)
|++.+.+.+ ++. .+.+|.+.|++.... . .+-+.+.++++++-|+++|+-+|.|=|..
T Consensus 17 ~~~gi~~~l~yl~~l--G~~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 17 DLQGIIEKLDYLKDL--GVTAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred CHHHHHHHHHHHHHC--CCCEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 555555554 333 567888888542221 0 11245779999999999999999998866
No 399
>PF04002 RadC: RadC-like JAB domain; InterPro: IPR001405 This family was named initially with reference to the Escherichia coli radC102 mutation which suggested that RadC was involved in repair of DNA lesions []. However the relevant mutation has subsequently been shown to be in recG, not radC []. In addition all attempts to characterise a radiation-related function for RadC in Streptococcus pneumoniae failed, suggesting that it is not involved in repair of DNA lesions, in recombination during transformation, in gene conversion, nor in mismatch repair [].; PDB: 2QLC_A.
Probab=54.00 E-value=28 Score=28.39 Aligned_cols=47 Identities=9% Similarity=0.238 Sum_probs=29.1
Q ss_pred HHHHHHHHhcCCCeEEEEEccccCCCccccCChhhH---HHHHHHHHhcCcEEE
Q 012138 212 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYL---KAVRDLCSKYNILMI 262 (470)
Q Consensus 212 ~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l---~~l~~l~~~~gillI 262 (470)
+-+++++.. +...|++-. |.|+|...|+.+.+ ++|.+.|+.-|+-|+
T Consensus 55 ~I~~~al~~---~A~~vIl~H-NHPsG~~~PS~~D~~~T~~L~~~~~~l~I~ll 104 (123)
T PF04002_consen 55 EIFRRALRL---NASSVILAH-NHPSGDPEPSDADIALTRRLKKAARLLGIELL 104 (123)
T ss_dssp HHHHHHHHT---T-SEEEEEE-E-TTS--S--HHHHHHHHHHHHHHHHHT-EEE
T ss_pred HHHHHHHhh---CCceEEEEE-EcCCCCCCCCHhHHHHHHHHHHHHHHcCCeee
Confidence 345777766 444555555 67999999998888 888888998887654
No 400
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=51.99 E-value=35 Score=32.74 Aligned_cols=39 Identities=13% Similarity=0.101 Sum_probs=29.1
Q ss_pred EEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc
Q 012138 226 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 268 (470)
Q Consensus 226 ~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~ 268 (470)
.+|++.. .=|-|. +.+++.+|.++|++.|+.+++|-.-.
T Consensus 131 d~VvlsG-SlP~g~---~~d~y~~li~~~~~~g~~vilD~Sg~ 169 (310)
T COG1105 131 DIVVLSG-SLPPGV---PPDAYAELIRILRQQGAKVILDTSGE 169 (310)
T ss_pred CEEEEeC-CCCCCC---CHHHHHHHHHHHHhcCCeEEEECChH
Confidence 3455544 334444 78999999999999999999996433
No 401
>KOG0352 consensus ATP-dependent DNA helicase [Replication, recombination and repair]
Probab=51.80 E-value=1.9e+02 Score=29.10 Aligned_cols=55 Identities=24% Similarity=0.438 Sum_probs=34.6
Q ss_pred CCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCc--EEEEeccccCCcccCCccccccC--CCCcceeeccc
Q 012138 222 GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNI--LMIADEIQSGLARSGRMLASDWE--EVRPDMVILGK 293 (470)
Q Consensus 222 ~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gi--llI~Dev~~g~g~~G~~~~~~~~--~~~pdi~s~sK 293 (470)
..+++.+++.|-+.. +..|-+-|..++. ++. ++++||+|+ .++| ++.||-+.++-
T Consensus 111 kp~~K~LYITPE~AA------t~~FQ~lLn~L~~-r~~L~Y~vVDEAHC----------VSQWGHDFRPDYL~LG~ 169 (641)
T KOG0352|consen 111 KPTIKMLYITPEGAA------TDGFQKLLNGLAN-RDVLRYIVVDEAHC----------VSQWGHDFRPDYLTLGS 169 (641)
T ss_pred CCceeEEEEchhhhh------hhhHHHHHHHHhh-hceeeeEEechhhh----------HhhhccccCcchhhhhh
Confidence 357899999994332 3333344444444 454 699999998 3333 34689887773
No 402
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=51.07 E-value=17 Score=38.47 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=30.0
Q ss_pred ChhhHHHHHHHHHhcCcEEEEeccccCCcccCCc
Q 012138 243 PDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM 276 (470)
Q Consensus 243 ~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~ 276 (470)
+++.++++++-|+++||-||+|=|+.-|+..|..
T Consensus 212 tPedfk~fVD~aH~~GIgViLD~V~~HF~~d~~~ 245 (628)
T COG0296 212 TPEDFKALVDAAHQAGIGVILDWVPNHFPPDGNY 245 (628)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEecCCcCCCCcch
Confidence 6788999999999999999999999988776543
No 403
>PF13481 AAA_25: AAA domain; PDB: 1G8Y_J 1OLO_A 1NLF_C.
Probab=50.86 E-value=25 Score=30.87 Aligned_cols=53 Identities=19% Similarity=0.267 Sum_probs=30.2
Q ss_pred CHHHHHHHHHhcCCCeEEEEEccccCCCccccCC----hhhHHHHHHHHHhcCcEEEE
Q 012138 210 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPP----DGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 210 d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~----~~~l~~l~~l~~~~gillI~ 263 (470)
+.+.+++.+.+. .++.+||++++..-.+.-..+ ..+++.+.++|+++|+.+|+
T Consensus 128 ~~~~l~~~~~~~-~~~~lvviD~l~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~vi~ 184 (193)
T PF13481_consen 128 DLEELEAALKEL-YGPDLVVIDPLQSLHDGDENSNSAVAQLMQELKRLAKEYGVAVIL 184 (193)
T ss_dssp HHHHHHHHHTT-----SEEEEE-GGGG--S-TT-HHHHHHHHHHHHHHHHHH--EEEE
T ss_pred HHHHHHHHHhhc-CCCcEEEEcCHHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 356677777652 157789999976643321111 35789999999999987664
No 404
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=50.57 E-value=38 Score=30.62 Aligned_cols=88 Identities=16% Similarity=0.205 Sum_probs=49.5
Q ss_pred HHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc---CCcccCCccccccCCCC-c
Q 012138 211 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS---GLARSGRMLASDWEEVR-P 286 (470)
Q Consensus 211 ~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~---g~g~~G~~~~~~~~~~~-p 286 (470)
++.+|++++. .+.++-+=.=...+-. -.+..++++++|++||+.+|+++=.. ..+-.|- |.|-. .
T Consensus 24 ~~~ve~al~~---Gv~~vQlR~K~~~~~~---~~~~a~~~~~lc~~~~v~liINd~~dlA~~~~AdGV-----HlGq~D~ 92 (211)
T COG0352 24 LEWVEAALKG---GVTAVQLREKDLSDEE---YLALAEKLRALCQKYGVPLIINDRVDLALAVGADGV-----HLGQDDM 92 (211)
T ss_pred HHHHHHHHhC---CCeEEEEecCCCChHH---HHHHHHHHHHHHHHhCCeEEecCcHHHHHhCCCCEE-----EcCCccc
Confidence 7888998876 5555554331222111 13456899999999999988876332 1222221 12221 1
Q ss_pred ceeeccccccCCCcceeEEEecHH
Q 012138 287 DMVILGKALGGGVIPVSAVLADKE 310 (470)
Q Consensus 287 di~s~sK~l~gG~~~ig~v~~~~~ 310 (470)
.+....+-+++++ .+|+-+-+.+
T Consensus 93 ~~~~ar~~~~~~~-iIG~S~h~~e 115 (211)
T COG0352 93 PLAEARELLGPGL-IIGLSTHDLE 115 (211)
T ss_pred chHHHHHhcCCCC-EEEeecCCHH
Confidence 2223445667776 7777665544
No 405
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=50.21 E-value=36 Score=32.98 Aligned_cols=58 Identities=10% Similarity=0.254 Sum_probs=39.3
Q ss_pred CHHHHHHHHHhc--CCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc
Q 012138 210 DITALEKIFKES--GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 268 (470)
Q Consensus 210 d~~~Le~~l~~~--~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~ 268 (470)
+.+.+++.++.. .+++++|++-- ++|+|.+..+..-.++|.++.++.-++++++..-+
T Consensus 81 ~~~~~~~~l~~~~~~~~vk~vvL~i-nSPGG~v~as~~i~~~l~~l~~~~PV~v~v~~~AA 140 (317)
T COG0616 81 GGDDIEEILRAARADPSVKAVVLRI-NSPGGSVVASELIARALKRLRAKKPVVVSVGGYAA 140 (317)
T ss_pred cHHHHHHHHHHHhcCCCCceEEEEE-ECcCCchhHHHHHHHHHHHHhhcCCEEEEECCeec
Confidence 455555555432 13677777654 88999999777777788888776657777776554
No 406
>PF12138 Spherulin4: Spherulation-specific family 4; InterPro: IPR021986 This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 250 and 398 amino acids in length. There is a conserved NPG sequence motif and there are two completely conserved G residues that may be functionally important. Starvation will often induce spherulation - the production of spores - and this process may involve DNA-methylation. Changes in the methylation of spherulin4 are associated with the formation of spherules, but these changes are probably transient. Methylation of the gene accompanies its transcriptional activation, and spherulin4 mRNA is only detectable in late spherulating cultures and mature spherules. It is a spherulation-specific protein.
Probab=48.58 E-value=45 Score=31.09 Aligned_cols=52 Identities=17% Similarity=0.197 Sum_probs=39.4
Q ss_pred HHHHHHHHHhcCCCeEEEEEccccCCCcc--ccCChhhHHHHHHHHHhcCcEEE
Q 012138 211 ITALEKIFKESGDQIAGFLFEPIQGEAGV--IIPPDGYLKAVRDLCSKYNILMI 262 (470)
Q Consensus 211 ~~~Le~~l~~~~~~~~~vi~epi~n~~G~--~~~~~~~l~~l~~l~~~~gillI 262 (470)
-+.|.+++..++...-.+|+||-++|+.. ..|...|..+|.++-+.-|+.+|
T Consensus 18 W~~l~~a~~~~p~~~f~vIiNP~sGPG~~~~~~pd~~Y~~~i~~L~~~~nv~vl 71 (253)
T PF12138_consen 18 WDPLYDAIAAHPSVPFTVIINPNSGPGSAPDPWPDANYAAAIPRLNSYANVRVL 71 (253)
T ss_pred hHHHHHHHhcCCCCcEEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhcCCCcEE
Confidence 45676777777666668889998888844 44799999999999766676665
No 407
>PRK04148 hypothetical protein; Provisional
Probab=48.09 E-value=1.6e+02 Score=24.46 Aligned_cols=22 Identities=27% Similarity=0.483 Sum_probs=19.6
Q ss_pred CChhhHHHHHHHHHhcCcEEEE
Q 012138 242 PPDGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 242 ~~~~~l~~l~~l~~~~gillI~ 263 (470)
||++..+.|.++|++.|+-+++
T Consensus 86 pp~el~~~~~~la~~~~~~~~i 107 (134)
T PRK04148 86 PPRDLQPFILELAKKINVPLII 107 (134)
T ss_pred CCHHHHHHHHHHHHHcCCCEEE
Confidence 3899999999999999987776
No 408
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=47.84 E-value=1.4e+02 Score=27.85 Aligned_cols=96 Identities=20% Similarity=0.242 Sum_probs=58.6
Q ss_pred eEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHH
Q 012138 134 MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITA 213 (470)
Q Consensus 134 ~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 213 (470)
+|++..|-+|+-..+-.+... +. .++...-+|-+....... +. ..+..=++.|.++
T Consensus 2 ~ILvlgGTtE~r~la~~L~~~----------g~-v~~sv~t~~g~~~~~~~~----~~---------~~v~~G~lg~~~~ 57 (249)
T PF02571_consen 2 KILVLGGTTEGRKLAERLAEA----------GY-VIVSVATSYGGELLKPEL----PG---------LEVRVGRLGDEEG 57 (249)
T ss_pred EEEEEechHHHHHHHHHHHhc----------CC-EEEEEEhhhhHhhhcccc----CC---------ceEEECCCCCHHH
Confidence 577888888998887776643 44 555555555333221000 00 0122223448899
Q ss_pred HHHHHHhcCCCeEEEE-EccccCCCccccCChhhHHHHHHHHHhcCcEEEE
Q 012138 214 LEKIFKESGDQIAGFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 214 Le~~l~~~~~~~~~vi-~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~ 263 (470)
+++.+.++ ++.+|| ..+ |-.... =+.+.+.|++.|+..+-
T Consensus 58 l~~~l~~~--~i~~vIDATH---PfA~~i-----s~na~~a~~~~~ipylR 98 (249)
T PF02571_consen 58 LAEFLREN--GIDAVIDATH---PFAAEI-----SQNAIEACRELGIPYLR 98 (249)
T ss_pred HHHHHHhC--CCcEEEECCC---chHHHH-----HHHHHHHHhhcCcceEE
Confidence 99999885 777776 333 333333 57788999999998874
No 409
>PF13167 GTP-bdg_N: GTP-binding GTPase N-terminal
Probab=47.47 E-value=99 Score=23.96 Aligned_cols=57 Identities=14% Similarity=0.298 Sum_probs=37.0
Q ss_pred CHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCc-EEEEecc
Q 012138 210 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNI-LMIADEI 266 (470)
Q Consensus 210 d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gi-llI~Dev 266 (470)
++++++.+....+-.+..-++-....|....+-..+-+++|.++++++++ ++|+|+-
T Consensus 9 ~l~El~~L~~t~g~~vv~~~~q~~~~~~p~~~iG~GK~eei~~~~~~~~~d~vvfd~~ 66 (95)
T PF13167_consen 9 SLEELEELAETAGYEVVGTVVQKRRKPDPKTYIGSGKVEEIKELIEELDADLVVFDNE 66 (95)
T ss_pred HHHHHHHHHHHCCCeEEEEEEecCCCCCcceeechhHHHHHHHHHhhcCCCEEEECCC
Confidence 47778888877654555444433233433333388889999999999886 4555643
No 410
>KOG0368 consensus Acetyl-CoA carboxylase [Lipid transport and metabolism]
Probab=45.86 E-value=1.3e+02 Score=35.24 Aligned_cols=94 Identities=17% Similarity=0.242 Sum_probs=53.7
Q ss_pred CCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCH
Q 012138 132 YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDI 211 (470)
Q Consensus 132 ~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (470)
.+++++.|+|-.|+ -.|+.+++|+|..- +++.+|-| +..-.+
T Consensus 54 I~kILIAnNGiAAv-K~irSiRkWayetF----~ner~I~F---------------------------------V~MaTp 95 (2196)
T KOG0368|consen 54 IKRILIANNGIAAV-KCIRSIRKWAYETF----GNERAIQF---------------------------------VCMATP 95 (2196)
T ss_pred eEEEEEecccHHHH-HHHHHHHHHHHHHh----CCcceEEE---------------------------------EEecCH
Confidence 56799999998887 56778888876643 23333322 111145
Q ss_pred HHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcc
Q 012138 212 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR 272 (470)
Q Consensus 212 ~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~ 272 (470)
|+|+..-+.. +.+=.+++- |+|..-..-.-.+.|+++|.+.+ +|.|++|+|.
T Consensus 96 ddl~anaeyI--rmADqyvev---PgGtNnNNyANVdlIvdiAe~~~----VdAVWaGWGH 147 (2196)
T KOG0368|consen 96 DDLRANAEYI--RMADQYVEV---PGGTNNNNYANVDLIVDIAERTD----VDAVWAGWGH 147 (2196)
T ss_pred HHHHhhHHHh--hhhhheeeC---CCCCCCCCcccHHHHHHHHHhcc----cceEeecccc
Confidence 5554433221 222234433 33333323333788888888877 4888887764
No 411
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
Probab=43.82 E-value=1.6e+02 Score=30.52 Aligned_cols=84 Identities=23% Similarity=0.304 Sum_probs=47.0
Q ss_pred CCeEEEEEccccCCCccccCCh-hhHHHHHHHHHhcCcEEEEeccccCCc-----------ccCCc--cccccCCCCcce
Q 012138 223 DQIAGFLFEPIQGEAGVIIPPD-GYLKAVRDLCSKYNILMIADEIQSGLA-----------RSGRM--LASDWEEVRPDM 288 (470)
Q Consensus 223 ~~~~~vi~epi~n~~G~~~~~~-~~l~~l~~l~~~~gillI~Dev~~g~g-----------~~G~~--~~~~~~~~~pdi 288 (470)
.++-.||.|-.-..+|.+.+.. +--.+.+++|+.++++|+.=.=..||- +.|.. +++.... .|-+
T Consensus 323 G~pVGiIANqp~~~~G~l~~~sa~KaArFI~~cd~~~iPlv~L~d~pGFm~G~~~E~~giik~Gakl~~A~aeat-VPki 401 (526)
T COG4799 323 GRPVGIIANQPRHLGGVLDIDSADKAARFIRLCDAFNIPLVFLVDTPGFMPGTDQEYGGIIKHGAKLLYAVAEAT-VPKI 401 (526)
T ss_pred CEEEEEEecCccccccccchHHHHHHHHHHHhhhccCCCeEEEeCCCCCCCChhHHhChHHHhhhHHHhhHhhcc-CCeE
Confidence 3455666443244577776322 223566799999999877644344651 12211 1222222 3444
Q ss_pred -eeccccccCCCcceeEEEecHHH
Q 012138 289 -VILGKALGGGVIPVSAVLADKEV 311 (470)
Q Consensus 289 -~s~sK~l~gG~~~ig~v~~~~~~ 311 (470)
+++.|++|||+ ++++++.+
T Consensus 402 tvI~rkayGga~----~~M~~~~~ 421 (526)
T COG4799 402 TVITRKAYGGAY----YVMGGKAL 421 (526)
T ss_pred EEEeccccccee----eeecCccC
Confidence 47889999998 56665543
No 412
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=43.64 E-value=60 Score=28.88 Aligned_cols=37 Identities=11% Similarity=0.215 Sum_probs=29.2
Q ss_pred CCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEE
Q 012138 222 GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 222 ~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~ 263 (470)
+-...+++||- -+..|.... .+++.++|++||+.+|.
T Consensus 150 Gl~p~avi~ei-l~~dG~~~~----~~~~~~fA~~~~l~~vs 186 (194)
T PF00926_consen 150 GLSPVAVICEI-LDDDGDMAR----RDELEEFAKKHGLPIVS 186 (194)
T ss_dssp TS-SBEEEEEB-BETTSSBHC----HHHHHHHHHHTT-EEEE
T ss_pred CCCCcEEEEEE-eCCCCCcCC----HHHHHHHHHHcCCcEEE
Confidence 33568888988 566898887 89999999999999885
No 413
>cd08071 MPN_DUF2466 Mov34/MPN/PAD-1 family. Mov34 DUF2466 (also known as DNA repair protein RadC) domain of unknown function contains the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity. However, to date, the name RadC has been misleading and no function has been determined.
Probab=43.31 E-value=71 Score=25.59 Aligned_cols=47 Identities=11% Similarity=0.251 Sum_probs=32.1
Q ss_pred HHHHHHHHhcCCCeEEEEEccccCCCccccCChhhH---HHHHHHHHhcCcEEE
Q 012138 212 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYL---KAVRDLCSKYNILMI 262 (470)
Q Consensus 212 ~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l---~~l~~l~~~~gillI 262 (470)
+-++.++.. ....+++-. +.|+|...|+.+.+ ++|.+.|+--|+.|+
T Consensus 50 ~i~~~aL~~---~A~~vil~H-NHPsG~~~PS~~D~~~T~~l~~~~~~l~i~ll 99 (113)
T cd08071 50 EIFKEALRH---NAAAIILAH-NHPSGDPTPSREDIELTKRLKEAGELLGIRLL 99 (113)
T ss_pred HHHHHHHHH---hhheEEEEe-eCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEe
Confidence 345667765 455666655 77999999987766 466666777777654
No 414
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=41.78 E-value=74 Score=28.44 Aligned_cols=35 Identities=20% Similarity=0.330 Sum_probs=29.5
Q ss_pred CeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEE
Q 012138 224 QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 224 ~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~ 263 (470)
...+++||- -+..|.... .+++.++|++||+.+|.
T Consensus 157 ~p~~vicEi-l~~dG~m~~----~~~~~~fA~~~~l~~is 191 (199)
T TIGR00506 157 KPAGVICEM-MNDDGTMAR----KPELMEYAKKHNLKLIS 191 (199)
T ss_pred CceEEEEEE-eCCCCCccC----HHHHHHHHHHcCCcEEE
Confidence 568888988 556888887 89999999999999874
No 415
>PRK00910 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=41.65 E-value=98 Score=28.06 Aligned_cols=35 Identities=20% Similarity=0.233 Sum_probs=29.4
Q ss_pred CeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEE
Q 012138 224 QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 224 ~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~ 263 (470)
...+++||- -++.|.... ++++.++|++||+.+|.
T Consensus 168 ~p~~vicEi-l~~dG~ma~----~~~l~~fA~~h~l~~is 202 (218)
T PRK00910 168 QPAGVLCEL-TNPDGTMAK----TPEIIAFGKLHNMPVLT 202 (218)
T ss_pred CceEEEEEE-ecCCCCcCC----HHHHHHHHHHcCCcEEE
Confidence 468888988 556788887 99999999999998864
No 416
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=40.96 E-value=1e+02 Score=28.19 Aligned_cols=35 Identities=20% Similarity=0.307 Sum_probs=29.7
Q ss_pred CeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEE
Q 012138 224 QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 224 ~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~ 263 (470)
...+++||- -++.|.... .+++.++|++||+.+|.
T Consensus 172 ~P~~vicEi-l~~dG~ma~----~~~l~~fA~~~~l~iis 206 (230)
T PRK00014 172 RPAGVLCEL-MNADGTMMR----GASLERYAAKEGLVALA 206 (230)
T ss_pred CceEEEEEE-eCCCCCccC----HHHHHHHHHHcCCcEEE
Confidence 468888988 667788887 99999999999998864
No 417
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=40.48 E-value=54 Score=32.58 Aligned_cols=57 Identities=11% Similarity=0.089 Sum_probs=37.8
Q ss_pred eecCCCHHHHHHHHHhcCCCeEEEEEccccCCC--------ccccCChhhHHHHHHHHHhcCcEEEE
Q 012138 205 KVDFGDITALEKIFKESGDQIAGFLFEPIQGEA--------GVIIPPDGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 205 ~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~--------G~~~~~~~~l~~l~~l~~~~gillI~ 263 (470)
.+...+++.+.+.+++. ++..|++|+++... |.+..-.+.+..|.++++++|+.+|+
T Consensus 141 l~~e~~le~I~~~i~~~--~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~lak~~~itvil 205 (372)
T cd01121 141 LLAETNLEDILASIEEL--KPDLVIIDSIQTVYSSELTSAPGSVSQVRECTAELMRFAKERNIPIFI 205 (372)
T ss_pred EEccCcHHHHHHHHHhc--CCcEEEEcchHHhhccccccCCCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 33444788888888764 67889999976532 11111234566788999999986654
No 418
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=40.44 E-value=61 Score=32.38 Aligned_cols=57 Identities=12% Similarity=0.138 Sum_probs=41.1
Q ss_pred eecCCCHHHHHHHHHhcCCCeEEEEEccccC---CC-----ccccCChhhHHHHHHHHHhcCcEEEE
Q 012138 205 KVDFGDITALEKIFKESGDQIAGFLFEPIQG---EA-----GVIIPPDGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 205 ~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n---~~-----G~~~~~~~~l~~l~~l~~~~gillI~ 263 (470)
.++..|++++.+.+++. ++..+|++++|. +. |.+-.-++--.+|.++|++.|+.++.
T Consensus 151 l~aEt~~e~I~~~l~~~--~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 151 LLAETNLEDIIAELEQE--KPDLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred EehhcCHHHHHHHHHhc--CCCEEEEeccceeecccccCCCCcHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 34444899999999885 777888888664 33 54443456678899999999987654
No 419
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=40.21 E-value=48 Score=32.88 Aligned_cols=50 Identities=18% Similarity=0.282 Sum_probs=33.8
Q ss_pred CHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEec
Q 012138 210 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 265 (470)
Q Consensus 210 d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~De 265 (470)
+.+.|-+.+++.-.+..++++.- ++ -|.+.+ .+.+.++||+.|+++++|-
T Consensus 129 ~~~~ll~~~~~~l~~~~~vVLSD-Y~-KG~L~~----~q~~I~~ar~~~~pVLvDP 178 (467)
T COG2870 129 DENKLLEKIKNALKSFDALVLSD-YA-KGVLTN----VQKMIDLAREAGIPVLVDP 178 (467)
T ss_pred hHHHHHHHHHHHhhcCCEEEEec-cc-cccchh----HHHHHHHHHHcCCcEEECC
Confidence 44444444444323556777655 44 355554 8999999999999999993
No 420
>KOG0353 consensus ATP-dependent DNA helicase [General function prediction only]
Probab=39.00 E-value=2.2e+02 Score=27.98 Aligned_cols=52 Identities=12% Similarity=0.209 Sum_probs=34.5
Q ss_pred HHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcC--cEEEEecccc
Q 012138 211 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN--ILMIADEIQS 268 (470)
Q Consensus 211 ~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~g--illI~Dev~~ 268 (470)
...+++.+.....+.+++++.|- .+..++.++.+|-+--. .| -++-+||||+
T Consensus 173 ~k~v~~~i~nkdse~kliyvtpe-----kiaksk~~mnkleka~~-~~~~~~iaidevhc 226 (695)
T KOG0353|consen 173 AKRVEAAITNKDSEFKLIYVTPE-----KIAKSKKFMNKLEKALE-AGFFKLIAIDEVHC 226 (695)
T ss_pred HHHHHHHHcCCCceeEEEEecHH-----HHHHHHHHHHHHHHHhh-cceeEEEeecceee
Confidence 45577777765567899999882 12336677777654432 33 3677899998
No 421
>KOG2433 consensus Uncharacterized conserved protein [Function unknown]
Probab=37.95 E-value=1.4e+02 Score=29.52 Aligned_cols=62 Identities=27% Similarity=0.384 Sum_probs=37.6
Q ss_pred CCHHHHHHHHHHHHHccc--cCCCCCCCcHHHHHHHHhhhhCCC-eEEecCChhHHHHHHHHHHHHh
Q 012138 92 CHPKIMKALQEQAEKLTL--SSRAFYNDKFPVFAERLTSMFGYD-MVLPMNTGAEGVETALKLARKW 155 (470)
Q Consensus 92 ~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~-~v~~~~sGteA~~~al~~~~~~ 155 (470)
.|.+|.+++.+.-++... +++.+.. ..++.--|.++++.+ +++++++|+|-.+.+-.+++.+
T Consensus 434 tHrEiQqaLvdi~DKpA~FVGSrQWIG--StEis~vLn~ll~~~skil~v~sGaEva~~~rELA~HF 498 (577)
T KOG2433|consen 434 THREIQQALVDIQDKPAKFVGSRQWIG--STEISFVLNELLKLESKILAVNSGAEVAERVRELARHF 498 (577)
T ss_pred cHHHHHHHHHhccCcccceecccceec--chhHHHHHHHHhccceEEEEeccccHHHHHHHHHHHHh
Confidence 566777777766554321 1111111 133444455666655 6999999999998887777753
No 422
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=37.29 E-value=2.5e+02 Score=27.35 Aligned_cols=80 Identities=19% Similarity=0.192 Sum_probs=45.7
Q ss_pred CHHHHHHHHHhcCCCeEEEEEc--cc-----cCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccC
Q 012138 210 DITALEKIFKESGDQIAGFLFE--PI-----QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE 282 (470)
Q Consensus 210 d~~~Le~~l~~~~~~~~~vi~e--pi-----~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~ 282 (470)
++++.+++++. ...+|.+- |- .-.+|.-.|.-.-+.++++.++++++.+|.|. |+-+.|... ..+
T Consensus 160 T~e~a~~Li~a---GAD~ikVgiGpGSicttR~~~Gvg~pqltAv~~~a~aa~~~~v~VIaDG---GIr~~gDI~--KAL 231 (343)
T TIGR01305 160 TGEMVEELILS---GADIVKVGIGPGSVCTTRTKTGVGYPQLSAVIECADAAHGLKGHIISDG---GCTCPGDVA--KAF 231 (343)
T ss_pred CHHHHHHHHHc---CCCEEEEcccCCCcccCceeCCCCcCHHHHHHHHHHHhccCCCeEEEcC---CcCchhHHH--HHH
Confidence 68888888875 33344322 31 22345555566667778888888899999994 343333221 112
Q ss_pred CCCcceeeccccccC
Q 012138 283 EVRPDMVILGKALGG 297 (470)
Q Consensus 283 ~~~pdi~s~sK~l~g 297 (470)
..-.|.+.++.-++|
T Consensus 232 A~GAd~VMlG~llAG 246 (343)
T TIGR01305 232 GAGADFVMLGGMFAG 246 (343)
T ss_pred HcCCCEEEECHhhhC
Confidence 223355656544443
No 423
>COG3870 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=36.34 E-value=1.7e+02 Score=22.83 Aligned_cols=49 Identities=6% Similarity=0.129 Sum_probs=35.9
Q ss_pred hHHHHHHHHHHcCceec----cCC-----CCEEEEecCCCCCHHHHHHHHHHHHHHHhcccCC
Q 012138 394 SAYDICLKMKERGILAK----PTH-----DTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 447 (470)
Q Consensus 394 ~~~~~~~~l~~~Gv~~~----~~~-----~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~ 447 (470)
++.++.+.|.++|+-+. .++ ...+.| ...++.++.+...|++..+ ...+
T Consensus 12 da~~l~~~L~d~~fraTkLAsTGGFlkaGNTTfli----Gved~~vd~~~s~Ike~C~-~req 69 (109)
T COG3870 12 DANELEDALTDKNFRATKLASTGGFLKAGNTTFLI----GVEDDRVDALRSLIKENCK-SREQ 69 (109)
T ss_pred cHHHHHHHHHhCCceeEEeeccCceeecCCeEEEE----ecccchhHHHHHHHHHHhh-hHhh
Confidence 78999999999998754 221 223333 4778899999999999887 4443
No 424
>PRK01792 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=36.22 E-value=1.2e+02 Score=27.35 Aligned_cols=35 Identities=14% Similarity=0.360 Sum_probs=29.3
Q ss_pred CeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEE
Q 012138 224 QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 224 ~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~ 263 (470)
...+++||- -+..|.... .+++.++|++||+.+|.
T Consensus 167 ~p~~vicEi-l~~dG~ma~----~~~~~~fA~~~~l~~is 201 (214)
T PRK01792 167 KEAGVICEI-TNDDGTMAR----TPEIVEFAKKFGYAVVT 201 (214)
T ss_pred CceEEEEEE-ecCCCCccC----HHHHHHHHHHcCCcEEE
Confidence 467888988 567788887 89999999999999874
No 425
>PRK13602 putative ribosomal protein L7Ae-like; Provisional
Probab=35.60 E-value=1.4e+02 Score=22.32 Aligned_cols=45 Identities=9% Similarity=0.111 Sum_probs=31.6
Q ss_pred HHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEec
Q 012138 211 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 265 (470)
Q Consensus 211 ~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~De 265 (470)
.++..+.|++ ++.++|++-. +- ++...+.+..+|++++++++.-+
T Consensus 16 ~~~v~kai~~--gkaklViiA~-D~-------~~~~~~~i~~~c~~~~Vp~~~~~ 60 (82)
T PRK13602 16 TKQTVKALKR--GSVKEVVVAE-DA-------DPRLTEKVEALANEKGVPVSKVD 60 (82)
T ss_pred HHHHHHHHHc--CCeeEEEEEC-CC-------CHHHHHHHHHHHHHcCCCEEEEC
Confidence 4556666765 3677777644 11 44568999999999999987654
No 426
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=35.14 E-value=1e+02 Score=25.82 Aligned_cols=50 Identities=18% Similarity=0.195 Sum_probs=30.0
Q ss_pred HHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEe
Q 012138 211 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIAD 264 (470)
Q Consensus 211 ~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~D 264 (470)
.+.|+++++..+.+.+.+++.|. .+ ... ..++-+.+.++|++|.-+.++|
T Consensus 66 ~~nl~~ii~~~~~~~~ivlv~~~-~~--~~~-~~~~n~~~~~~a~~~~~v~~id 115 (150)
T cd01840 66 KDQLDELLDALGPDRQVYLVNPH-VP--RPW-EPDVNAYLLDAAKKYKNVTIID 115 (150)
T ss_pred HHHHHHHHHHcCCCCEEEEEECC-CC--cch-HHHHHHHHHHHHHHCCCcEEec
Confidence 45666666655445677777773 22 222 3555677888999993344445
No 427
>PRK10785 maltodextrin glucosidase; Provisional
Probab=34.04 E-value=72 Score=34.00 Aligned_cols=60 Identities=12% Similarity=0.158 Sum_probs=41.0
Q ss_pred CHHHHHHHHHhcC-CCeEEEEEcccc-CCCccccC------------ChhhHHHHHHHHHhcCcEEEEeccccC
Q 012138 210 DITALEKIFKESG-DQIAGFLFEPIQ-GEAGVIIP------------PDGYLKAVRDLCSKYNILMIADEIQSG 269 (470)
Q Consensus 210 d~~~Le~~l~~~~-~~~~~vi~epi~-n~~G~~~~------------~~~~l~~l~~l~~~~gillI~Dev~~g 269 (470)
|++-+.+.|.-.. -.+.+|.++|+. +++..-++ +.+.+++|++.|+++|+-||.|-|...
T Consensus 177 Dl~GI~~kLdYL~~LGv~~I~L~Pif~s~s~hgYd~~Dy~~iDp~~Gt~~df~~Lv~~aH~rGikVilD~V~NH 250 (598)
T PRK10785 177 DLDGISEKLPYLKKLGVTALYLNPIFTAPSVHKYDTEDYRHVDPQLGGDAALLRLRHATQQRGMRLVLDGVFNH 250 (598)
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEECCCc
Confidence 6666666554321 156788899954 34332222 346799999999999999999998763
No 428
>cd04915 ACT_AK-Ectoine_2 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinas
Probab=33.95 E-value=96 Score=21.90 Aligned_cols=46 Identities=20% Similarity=0.202 Sum_probs=34.3
Q ss_pred hHHHHHHHHHHcCcee--ccCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 012138 394 SAYDICLKMKERGILA--KPTHDTIVRLTPPLSISSNELQEGSKALHDVL 441 (470)
Q Consensus 394 ~~~~~~~~l~~~Gv~~--~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l 441 (470)
-..++...|.+.|+-+ ...+..-++++ +...+++.++++.+|.+.+
T Consensus 17 v~~ki~~~L~~~~I~v~~i~~~~s~~~is--~~V~~~~~~~av~~Lh~~f 64 (66)
T cd04915 17 VLARGLAALAEAGIEPIAAHQSMRNVDVQ--FVVDRDDYDNAIKALHAAL 64 (66)
T ss_pred HHHHHHHHHHHCCCCEEEEEecCCeeEEE--EEEEHHHHHHHHHHHHHHH
Confidence 4567888888888876 22334446676 6788999999999998765
No 429
>PRK11633 cell division protein DedD; Provisional
Probab=33.17 E-value=2.4e+02 Score=25.77 Aligned_cols=50 Identities=16% Similarity=0.175 Sum_probs=39.9
Q ss_pred hhHHHHHHHHHHcCceecc-----CCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 393 VSAYDICLKMKERGILAKP-----THDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 393 ~~~~~~~~~l~~~Gv~~~~-----~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
..+..+..+|+..|+-... ..+.+.|+...-..++++.+.++..|++...
T Consensus 161 ~~A~~l~~kL~~~G~~Ay~~~~~~~~G~~tRV~VGP~~sk~~ae~~~~~Lk~~~G 215 (226)
T PRK11633 161 DKVNEIVAKLRLSGYRVYTVPSTPVQGKITRIYVGPDASKDKLKGSLGELKQLSG 215 (226)
T ss_pred HHHHHHHHHHHHCCCeeEEEeeecCCCcEEEEEeCCCCCHHHHHHHHHHHHHhcC
Confidence 4788999999999986542 3345778877788999999999999988654
No 430
>TIGR00608 radc DNA repair protein radc. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=32.78 E-value=1e+02 Score=28.01 Aligned_cols=47 Identities=11% Similarity=0.208 Sum_probs=33.3
Q ss_pred HHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHH---HHHHHHHhcCcEEE
Q 012138 212 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLK---AVRDLCSKYNILMI 262 (470)
Q Consensus 212 ~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~---~l~~l~~~~gillI 262 (470)
+-++.++.. +..+||+-+ |.|+|...|+.+.++ +|.+.|+--||.|+
T Consensus 150 eI~~~Al~~---~A~~vIlaH-NHPSG~~~PS~~Di~~T~~l~~a~~~lgI~ll 199 (218)
T TIGR00608 150 EIFKEALKL---SASALILAH-NHPSGEPSPSQEDILITERLRKAAELLGIELL 199 (218)
T ss_pred HHHHHHHHh---hCCeEEEEe-ecCCCCCCCCHHHHHHHHHHHHHHHhCCCEEe
Confidence 456777776 455666666 779999999988764 66666777776654
No 431
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=32.36 E-value=37 Score=25.50 Aligned_cols=23 Identities=13% Similarity=0.170 Sum_probs=20.3
Q ss_pred hHHHHHHHHHhcCcEEEEecccc
Q 012138 246 YLKAVRDLCSKYNILMIADEIQS 268 (470)
Q Consensus 246 ~l~~l~~l~~~~gillI~Dev~~ 268 (470)
.-++|+++++++|++++.|...+
T Consensus 28 ~A~~I~~~A~e~~VPi~~~~~LA 50 (82)
T TIGR00789 28 VAERIIEIAKKHGIPIVEDPDLV 50 (82)
T ss_pred HHHHHHHHHHHcCCCEEeCHHHH
Confidence 36899999999999999998765
No 432
>cd04920 ACT_AKiii-DAPDC_2 ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC). This CD includes the second of two ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC) bacterial protein. Aspartokinase (AK) is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. The lysA gene encodes the enzyme DAPDC, a pyridoxal-5'-phosphate (PLP)-dependent enzyme which catalyzes the final step in the lysine biosynthetic pathway converting meso-diaminopimelic acid (DAP) to l-lysine. Tandem ACT domains are positioned centrally with the AK catalytic domain N-terminal and the DAPDC domains C-terminal. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=32.07 E-value=75 Score=22.19 Aligned_cols=46 Identities=11% Similarity=0.027 Sum_probs=34.0
Q ss_pred hHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 012138 394 SAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 441 (470)
Q Consensus 394 ~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l 441 (470)
-..++.+.|.+.++.+...+..-++++ +...+++.++++.+|.+.+
T Consensus 16 v~~~~~~~L~~~~i~~i~~~~s~~~is--~vv~~~d~~~av~~LH~~f 61 (63)
T cd04920 16 KLGPALEVFGKKPVHLVSQAANDLNLT--FVVDEDQADGLCARLHFQL 61 (63)
T ss_pred HHHHHHHHHhcCCceEEEEeCCCCeEE--EEEeHHHHHHHHHHHHHHH
Confidence 456777788777887654444455666 6788999999999998765
No 433
>cd01393 recA_like RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange. While prokaryotes have a single RecA protein, eukaryotes have multiple RecA homologs such as Rad51, DMC1 and Rad55/57. Archaea have the RecA-like homologs radA and radB.
Probab=32.04 E-value=1.6e+02 Score=26.53 Aligned_cols=55 Identities=11% Similarity=0.102 Sum_probs=32.4
Q ss_pred CCHHHHHHHHHhc-----CCCeEEEEEccccCCCccccCC-----------hhhHHHHHHHHHhcCcEEEE
Q 012138 209 GDITALEKIFKES-----GDQIAGFLFEPIQGEAGVIIPP-----------DGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 209 ~d~~~Le~~l~~~-----~~~~~~vi~epi~n~~G~~~~~-----------~~~l~~l~~l~~~~gillI~ 263 (470)
.+.+++...+.+. ..++++|+++++........+. ...+..|..+|+++++.+|+
T Consensus 94 ~~~~~~~~~l~~~~~~~~~~~~~lvVIDsis~l~~~~~~~~~~~~~~~~~l~~~~~~L~~~a~~~~~~vi~ 164 (226)
T cd01393 94 YNGEQQLEIVEELERIMSSGRVDLVVVDSVAALFRKEFIGRGMLAERARLLSQALRKLLRLADKFNVAVVF 164 (226)
T ss_pred CCHHHHHHHHHHHHHHhhcCCeeEEEEcCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEE
Confidence 3555555544432 2378899999976432111101 22356688999999987665
No 434
>PRK13601 putative L7Ae-like ribosomal protein; Provisional
Probab=31.74 E-value=1e+02 Score=23.11 Aligned_cols=47 Identities=11% Similarity=0.198 Sum_probs=32.1
Q ss_pred HHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccc
Q 012138 211 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 267 (470)
Q Consensus 211 ~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~ 267 (470)
.+...++++. .+.++|++-. .- ++...+.+.++|++++++++.....
T Consensus 13 ~~~vlkaIk~--gkakLViiA~-Da-------~~~~~k~i~~~c~~~~Vpv~~~~t~ 59 (82)
T PRK13601 13 AKQTLKAITN--CNVLQVYIAK-DA-------EEHVTKKIKELCEEKSIKIVYIDTM 59 (82)
T ss_pred hHHHHHHHHc--CCeeEEEEeC-CC-------CHHHHHHHHHHHHhCCCCEEEeCCH
Confidence 3455556654 3777777644 21 5566899999999999999755433
No 435
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=30.48 E-value=47 Score=31.42 Aligned_cols=26 Identities=23% Similarity=0.220 Sum_probs=23.0
Q ss_pred ChhhHHHHHHHHHhcCcEEEEecccc
Q 012138 243 PDGYLKAVRDLCSKYNILMIADEIQS 268 (470)
Q Consensus 243 ~~~~l~~l~~l~~~~gillI~Dev~~ 268 (470)
+.+.+++|++.|+++|+-||+|=|..
T Consensus 50 t~~d~~~Lv~~~h~~gi~VilD~V~N 75 (316)
T PF00128_consen 50 TMEDFKELVDAAHKRGIKVILDVVPN 75 (316)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEETS
T ss_pred hhhhhhhhhhccccccceEEEeeecc
Confidence 45679999999999999999998876
No 436
>PRK03353 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=30.47 E-value=1.1e+02 Score=27.80 Aligned_cols=35 Identities=17% Similarity=0.279 Sum_probs=28.9
Q ss_pred CeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEE
Q 012138 224 QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 224 ~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~ 263 (470)
...+++||- -++.|.... .+++.++|++||+.+|.
T Consensus 167 ~P~avi~ei-~~~~G~~~~----~~~~~~fA~~~~l~~v~ 201 (217)
T PRK03353 167 KPAGVLCEL-TNDDGTMAR----APECIAFAKQHNMPVLT 201 (217)
T ss_pred CceEEEEEe-ecCCCCccc----HHHHHHHHHHcCCcEEE
Confidence 467888887 557788887 88999999999998864
No 437
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=30.27 E-value=1.8e+02 Score=24.17 Aligned_cols=57 Identities=23% Similarity=0.302 Sum_probs=38.4
Q ss_pred CHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHh-c-CcE-EEEecccc
Q 012138 210 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK-Y-NIL-MIADEIQS 268 (470)
Q Consensus 210 d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~-~-gil-lI~Dev~~ 268 (470)
+.+.|.++++++ ++..|++=-+.++.|..-+.....+++.+..++ + ++. ..+||-++
T Consensus 39 ~~~~l~~li~~~--~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~T 98 (135)
T PF03652_consen 39 DIEELKKLIEEY--QIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLT 98 (135)
T ss_dssp CHHHHHHHHHHC--CECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCS
T ss_pred HHHHHHHHHHHh--CCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChh
Confidence 789999999986 566666444477777776666666665555444 3 764 56899876
No 438
>PRK00024 hypothetical protein; Reviewed
Probab=30.14 E-value=1.2e+02 Score=27.82 Aligned_cols=47 Identities=11% Similarity=0.213 Sum_probs=33.4
Q ss_pred HHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHH---HHHHHHHhcCcEEE
Q 012138 212 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLK---AVRDLCSKYNILMI 262 (470)
Q Consensus 212 ~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~---~l~~l~~~~gillI 262 (470)
+-++.++.. +..+||+-+ |.|+|...|+.+.++ +|.+.|+--|+.|+
T Consensus 156 ei~~~Al~~---~A~~iIl~H-NHPSG~~~PS~~D~~~T~~l~~a~~~l~I~ll 205 (224)
T PRK00024 156 EIVKRALKL---NAAALILAH-NHPSGDPEPSQADILITKRLKEAGELLGIRLL 205 (224)
T ss_pred HHHHHHHHh---hccceEEEe-cCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEe
Confidence 456777776 556677666 779999999988774 56666666776654
No 439
>PF02844 GARS_N: Phosphoribosylglycinamide synthetase, N domain; InterPro: IPR020562 Phosphoribosylglycinamide synthetase (6.3.4.13 from EC) (GARS) (phosphoribosylamine glycine ligase) [] catalyses the second step in the de novo biosynthesis of purine. The reaction catalysed by phosphoribosylglycinamide synthetase is the ATP-dependent addition of 5-phosphoribosylamine to glycine to form 5'phosphoribosylglycinamide: ATP + 5-phosphoribosylamine + glycine = ADP + Pi + 5'-phosphoribosylglycinamide In bacteria, GARS is a monofunctional enzyme (encoded by the purD gene). In yeast, GARS is part of a bifunctional enzyme (encoded by the ADE5/7 gene) in conjunction with phosphoribosylformylglycinamidine cyclo-ligase (AIRS) (IPR000728 from INTERPRO). In higher eukaryotes, GARS is part of a trifunctional enzyme in conjunction with AIRS (IPR000728 from INTERPRO) and with phosphoribosylglycinamide formyltransferase (GART) (), forming GARS-AIRS-GART. This entry represents the N-domain, which is related to the N-terminal domain of biotin carboxylase/carbamoyl phosphate synthetase (IPR005481 from INTERPRO).; GO: 0004637 phosphoribosylamine-glycine ligase activity, 0009113 purine base biosynthetic process; PDB: 3MJF_A 2XD4_A 2XCL_A 2IP4_A 2YW2_B 2YYA_A 3LP8_A 1VKZ_A 2YS6_A 2YRX_A ....
Probab=29.95 E-value=2.2e+02 Score=22.36 Aligned_cols=44 Identities=20% Similarity=0.242 Sum_probs=30.9
Q ss_pred cCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEE
Q 012138 207 DFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMI 262 (470)
Q Consensus 207 ~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI 262 (470)
...|.+.+.+...++ ++-.+++-| ..-....|.+..++.|+.++
T Consensus 47 ~~~d~~~l~~~a~~~--~idlvvvGP----------E~pL~~Gl~D~l~~~gi~vf 90 (100)
T PF02844_consen 47 DITDPEELADFAKEN--KIDLVVVGP----------EAPLVAGLADALRAAGIPVF 90 (100)
T ss_dssp -TT-HHHHHHHHHHT--TESEEEESS----------HHHHHTTHHHHHHHTT-CEE
T ss_pred CCCCHHHHHHHHHHc--CCCEEEECC----------hHHHHHHHHHHHHHCCCcEE
Confidence 344888888888775 788888877 44446888999999888654
No 440
>TIGR00355 purH phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase. Involved in purine ribonucleotide biosynthesis. The IMP cyclohydrolase activity is in the N-terminal region.
Probab=29.72 E-value=90 Score=32.11 Aligned_cols=39 Identities=13% Similarity=0.134 Sum_probs=27.5
Q ss_pred HHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEE
Q 012138 212 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 212 ~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~ 263 (470)
|.++.+.+. .+++|| -|+|.+-+ +++++.|++||+-++.
T Consensus 465 D~ve~aa~a---Gi~aIi-----QPGGSiRD-----~evI~aa~e~giaMvf 503 (511)
T TIGR00355 465 DGVEEAAAA---GITCII-----QPGGSMRD-----EDSIWAADEHGIVMVF 503 (511)
T ss_pred ccHHHHHHc---CCEEEE-----cCCCCCCc-----HHHHHHHHHhCCEEEE
Confidence 344444443 556654 26999985 7888999999998885
No 441
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=29.11 E-value=3.3e+02 Score=26.58 Aligned_cols=55 Identities=15% Similarity=0.169 Sum_probs=34.4
Q ss_pred CHHHHHHHHHhcCCCeE-----EEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEec
Q 012138 210 DITALEKIFKESGDQIA-----GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 265 (470)
Q Consensus 210 d~~~Le~~l~~~~~~~~-----~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~De 265 (470)
+.+..+++++.--+-++ .=+|.. .-.+|.=.|...-+.+..+.++++|+.+|.|.
T Consensus 161 T~e~a~~Li~aGAD~vKVGIGpGSiCtT-r~vtGvG~PQltAV~~~a~~a~~~gvpiIADG 220 (346)
T PRK05096 161 TGEMVEELILSGADIVKVGIGPGSVCTT-RVKTGVGYPQLSAVIECADAAHGLGGQIVSDG 220 (346)
T ss_pred CHHHHHHHHHcCCCEEEEcccCCccccC-ccccccChhHHHHHHHHHHHHHHcCCCEEecC
Confidence 67888888875212111 012333 33455555555557777888899999999994
No 442
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=28.90 E-value=4.2e+02 Score=24.60 Aligned_cols=95 Identities=20% Similarity=0.188 Sum_probs=56.3
Q ss_pred CeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHH
Q 012138 133 DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDIT 212 (470)
Q Consensus 133 ~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 212 (470)
.+|++..|-+|+-..+=.+... |...+++....| |. .. ... ..+..-++.|.+
T Consensus 3 ~~IlvlgGT~egr~la~~L~~~----------g~~v~~Svat~~-g~-~~------~~~---------~~v~~G~l~~~~ 55 (248)
T PRK08057 3 PRILLLGGTSEARALARALAAA----------GVDIVLSLAGRT-GG-PA------DLP---------GPVRVGGFGGAE 55 (248)
T ss_pred ceEEEEechHHHHHHHHHHHhC----------CCeEEEEEccCC-CC-cc------cCC---------ceEEECCCCCHH
Confidence 3577778888888777555432 444565555443 21 00 000 012223344789
Q ss_pred HHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEE
Q 012138 213 ALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 213 ~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~ 263 (470)
++++.+.++ ++.+|| |- ..|--... =+.+.+.|++.|+..+-
T Consensus 56 ~l~~~l~~~--~i~~VI-DA-THPfA~~i-----s~~a~~ac~~~~ipyiR 97 (248)
T PRK08057 56 GLAAYLREE--GIDLVI-DA-THPYAAQI-----SANAAAACRALGIPYLR 97 (248)
T ss_pred HHHHHHHHC--CCCEEE-EC-CCccHHHH-----HHHHHHHHHHhCCcEEE
Confidence 999999885 777776 33 22333333 57778999999998774
No 443
>cd01123 Rad51_DMC1_radA Rad51_DMC1_radA,B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a similiar recombination reaction as RecA, using ATP-dependent DNA binding activity and a DNA-dependent ATPase. However, this reaction is less efficient and requires accessory proteins such as RAD55/57 .
Probab=28.65 E-value=92 Score=28.26 Aligned_cols=40 Identities=10% Similarity=0.263 Sum_probs=25.5
Q ss_pred CeEEEEEccccCCCccccCC-----------hhhHHHHHHHHHhcCcEEEE
Q 012138 224 QIAGFLFEPIQGEAGVIIPP-----------DGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 224 ~~~~vi~epi~n~~G~~~~~-----------~~~l~~l~~l~~~~gillI~ 263 (470)
+++.|++|++...-...... ..++..|..+|+++++.+++
T Consensus 115 ~~~liVIDSis~~~~~~~~~~~~~~~r~~~l~~~~~~L~~la~~~~~avl~ 165 (235)
T cd01123 115 RIKLVIVDSVTALFRAEFDGRGELAERQQHLAKLLRTLKRLADEFNVAVVI 165 (235)
T ss_pred CeeEEEEeCcHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 78899999976531111101 23467788889999976554
No 444
>PF06153 DUF970: Protein of unknown function (DUF970); InterPro: IPR010375 This is a family of uncharacterised bacterial proteins.; PDB: 3M05_A.
Probab=28.47 E-value=70 Score=25.50 Aligned_cols=49 Identities=12% Similarity=0.208 Sum_probs=34.3
Q ss_pred hHHHHHHHHHHcCceecc----CC-----CCEEEEecCCCCCHHHHHHHHHHHHHHHhcccCC
Q 012138 394 SAYDICLKMKERGILAKP----TH-----DTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 447 (470)
Q Consensus 394 ~~~~~~~~l~~~Gv~~~~----~~-----~~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~ 447 (470)
++..+.+.|.++|+.+.. |+ ...+-+ ...++++++.++.|++..+ +..+
T Consensus 12 Da~~l~~~L~~~g~~~TkLsstGGFLr~GNtTlli----Gvede~v~~vl~iIk~~c~-~R~~ 69 (109)
T PF06153_consen 12 DADDLSDALNENGFRVTKLSSTGGFLREGNTTLLI----GVEDEKVDEVLEIIKENCK-KREQ 69 (109)
T ss_dssp HHHHHHHHHHHTT--EEEEEEEETTTTEEEEEEEE----EEEGGGHHHHHHHHHHHH---EEE
T ss_pred hHHHHHHHHHHCCceEEEEecccceeccCCEEEEE----EecHHHHHHHHHHHHHhhc-Ccee
Confidence 789999999999998652 21 233433 4788999999999999998 6554
No 445
>PRK01018 50S ribosomal protein L30e; Reviewed
Probab=27.79 E-value=1.9e+02 Score=22.45 Aligned_cols=42 Identities=10% Similarity=0.044 Sum_probs=29.6
Q ss_pred HHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEE
Q 012138 212 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 212 ~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~ 263 (470)
....+.++.. +.++|++-. . . ++...+.+..+|++|+++++.
T Consensus 22 ~~v~kai~~g--kaklViiA~-D------~-~~~~~~~i~~~c~~~~Ip~~~ 63 (99)
T PRK01018 22 KRTIKAIKLG--KAKLVIVAS-N------C-PKDIKEDIEYYAKLSGIPVYE 63 (99)
T ss_pred HHHHHHHHcC--CceEEEEeC-C------C-CHHHHHHHHHHHHHcCCCEEE
Confidence 4455566542 677777644 1 1 567789999999999999865
No 446
>COG1707 ACT domain-containing protein [General function prediction only]
Probab=27.77 E-value=3.9e+02 Score=23.07 Aligned_cols=34 Identities=21% Similarity=0.246 Sum_probs=23.2
Q ss_pred CeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEe
Q 012138 224 QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIAD 264 (470)
Q Consensus 224 ~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~D 264 (470)
++.++++-. .-++|.+ -+++.++-++||+.+|+=
T Consensus 141 Rv~iLVLAG-slMGGkI------teaVk~lr~~hgI~VISL 174 (218)
T COG1707 141 RVGILVLAG-SLMGGKI------TEAVKELREEHGIPVISL 174 (218)
T ss_pred cceeEEEec-ccccchH------HHHHHHHHHhcCCeEEEe
Confidence 555555543 3355655 477888889999999973
No 447
>PRK09314 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional
Probab=27.00 E-value=89 Score=30.47 Aligned_cols=35 Identities=23% Similarity=0.290 Sum_probs=29.5
Q ss_pred CeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEE
Q 012138 224 QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 224 ~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~ 263 (470)
..++++||- -+..|.... ++++.++|++||+.+|.
T Consensus 156 ~p~~vicEi-l~~dG~ma~----~~~l~~fA~~h~l~~is 190 (339)
T PRK09314 156 KPVAVICEI-MKEDGTMAR----RDDLEDFAKKHNLKMIY 190 (339)
T ss_pred CceEEEEEE-ecCCCCccc----HHHHHHHHHHcCCcEEE
Confidence 468899987 567798887 89999999999998864
No 448
>TIGR00160 MGSA methylglyoxal synthase. Methylglyoxal synthase (MGS) generates methylglyoxal (MG), a toxic metabolite (that may also be a regulatory metabolite and) that is detoxified, prinicipally, through a pathway involving glutathione and glyoxylase I. Totemeyer, et al. (MUID:98149311) propose that, during a loss of control over carbon flux, with accumulation of phosphorylated sugars and depletion of phosphate, as might happen during a rapid shift to a richer medium, MGS aids the cell by converting some dihydroxyacetone phosphate (DHAP) to MG and phosphate. This is therefore an alternative to triosephosphate isomerase and the remainder of the glycolytic pathway for the disposal of DHAP during the stress of a sudden increase in available sugars.
Probab=26.81 E-value=1.1e+02 Score=25.56 Aligned_cols=52 Identities=19% Similarity=0.407 Sum_probs=33.8
Q ss_pred HHHHHHHHhcCCCeEE--EEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCC
Q 012138 212 TALEKIFKESGDQIAG--FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 270 (470)
Q Consensus 212 ~~Le~~l~~~~~~~~~--vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~ 270 (470)
.++-..+.+. ++.+ |+.+| .++-..-.+ ++.|.++|.-|++++-...+-+.+
T Consensus 63 qQIga~Ia~g--~id~vIFf~DP-l~~~phepD----i~aLlRlc~v~nIP~AtN~aTA~~ 116 (143)
T TIGR00160 63 QQIGALIAEG--KIDAVIFFWDP-LNAQPHEPD----VKALLRLCTVWNIPLATNVATADF 116 (143)
T ss_pred HHHHHHHHhC--CCCEEEEecCC-CCCCCCCcC----HHHHHHHHHhhCcccccCHHHHHH
Confidence 3455555543 4443 33677 444444444 999999999999999887665543
No 449
>cd01169 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1. The first step is the phosphorylation of the hydroxyl group of HMP to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate (HMP-P) and then the phophorylation of HMP-P to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate (HMP-PP), which is the substrate for the thiamine synthase coupling reaction.
Probab=26.79 E-value=2e+02 Score=26.12 Aligned_cols=51 Identities=12% Similarity=0.169 Sum_probs=33.0
Q ss_pred CHHHHHHHHHhcC--CCeEEEEEccccCCCccccCChhhHHHHHHHHHhc-CcEEEEecccc
Q 012138 210 DITALEKIFKESG--DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY-NILMIADEIQS 268 (470)
Q Consensus 210 d~~~Le~~l~~~~--~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~-gillI~Dev~~ 268 (470)
+++.+++.++..- .+..+|.+ |.+. +++.++.+.++++++ ++++++|-+..
T Consensus 52 ~~~~~~~~l~~~~~~~~~~~i~~-------G~l~-~~~~~~~i~~~~~~~~~~~vv~Dpv~~ 105 (242)
T cd01169 52 PPEFVAAQLDAVLEDIPVDAIKI-------GMLG-SAEIIEAVAEALKDYPDIPVVLDPVMV 105 (242)
T ss_pred CHHHHHHHHHHHHhCCCCCEEEE-------CCCC-CHHHHHHHHHHHHhCCCCcEEECCcee
Confidence 4454544443321 24455554 5554 778899999999987 89999996643
No 450
>cd04937 ACT_AKi-DapG-BS_2 ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI. This CD includes the C-terminal of the two ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) strain 168), Clostridia, and Actinobacteria bacterial species. In B. subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive AK isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The BS AKI is tetrameric consisting of two alpha and two beta subunits; th
Probab=26.28 E-value=1.2e+02 Score=21.05 Aligned_cols=47 Identities=23% Similarity=0.353 Sum_probs=34.2
Q ss_pred hHHHHHHHHHHcCceeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 012138 394 SAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 442 (470)
Q Consensus 394 ~~~~~~~~l~~~Gv~~~~~~~~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 442 (470)
-..++...|.+.|+-+......-..++ +...+++.++++.+|.+.+.
T Consensus 17 i~~~if~aL~~~~I~v~~~~~Se~~is--~~v~~~~~~~av~~Lh~~f~ 63 (64)
T cd04937 17 VMAKIVGALSKEGIEILQTADSHTTIS--CLVSEDDVKEAVNALHEAFE 63 (64)
T ss_pred HHHHHHHHHHHCCCCEEEEEcCccEEE--EEEcHHHHHHHHHHHHHHhc
Confidence 466788889888887753332334555 66889999999999987764
No 451
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=25.94 E-value=1.5e+02 Score=26.93 Aligned_cols=54 Identities=9% Similarity=0.086 Sum_probs=33.6
Q ss_pred CHHHHHHHHHhc--CCCeEEEEEccccCC-Ccc-ccCC----hhhHHHHHHHHHhcCcEEEE
Q 012138 210 DITALEKIFKES--GDQIAGFLFEPIQGE-AGV-IIPP----DGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 210 d~~~Le~~l~~~--~~~~~~vi~epi~n~-~G~-~~~~----~~~l~~l~~l~~~~gillI~ 263 (470)
++++|++.+... ..++..|++++++.- .+. .... ...++.|.++|+++|+.+|+
T Consensus 107 ~~~~l~~~i~~~~~~~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 107 TVSDIRSRARRLKKEHGLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 566666555432 126788999997643 121 1101 13578889999999988776
No 452
>PRK06683 hypothetical protein; Provisional
Probab=25.92 E-value=1.5e+02 Score=22.14 Aligned_cols=50 Identities=10% Similarity=0.011 Sum_probs=33.4
Q ss_pred HHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCC
Q 012138 211 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 270 (470)
Q Consensus 211 ~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~ 270 (470)
.+...+.++. ++.+.|++-. .- ++...+.+.++|+.++++++.-+.-..+
T Consensus 16 ~~~v~kaik~--gkaklViiA~-Da-------~~~~~~~i~~~~~~~~Vpv~~~~t~~eL 65 (82)
T PRK06683 16 HKRTLEAIKN--GIVKEVVIAE-DA-------DMRLTHVIIRTALQHNIPITKVESVRKL 65 (82)
T ss_pred HHHHHHHHHc--CCeeEEEEEC-CC-------CHHHHHHHHHHHHhcCCCEEEECCHHHH
Confidence 3445556654 3777777644 11 5556899999999999999876543333
No 453
>COG0138 PurH AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) [Nucleotide transport and metabolism]
Probab=25.81 E-value=1.3e+02 Score=30.72 Aligned_cols=39 Identities=18% Similarity=0.236 Sum_probs=28.3
Q ss_pred HHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEE
Q 012138 212 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 212 ~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~ 263 (470)
|.++.+.+. .+++|| .|+|.+-+ +++++-|++||+.++.
T Consensus 469 D~i~~aA~a---Gi~aII-----qPGGSirD-----~eVI~aAde~giaMvf 507 (515)
T COG0138 469 DGIDAAAKA---GIKAII-----QPGGSIRD-----QEVIAAADEHGIAMVF 507 (515)
T ss_pred chHHHHHHc---CCeEEE-----CCCCcccc-----HHHHHHHHhcCcEEEE
Confidence 344444444 566664 36999985 7889999999998885
No 454
>PLN03244 alpha-amylase; Provisional
Probab=25.64 E-value=91 Score=34.07 Aligned_cols=31 Identities=19% Similarity=0.178 Sum_probs=27.1
Q ss_pred ChhhHHHHHHHHHhcCcEEEEeccccCCccc
Q 012138 243 PDGYLKAVRDLCSKYNILMIADEIQSGLARS 273 (470)
Q Consensus 243 ~~~~l~~l~~l~~~~gillI~Dev~~g~g~~ 273 (470)
+++.++.+++.|++.|+-||.|=|+..++..
T Consensus 439 TPeDLK~LVD~aH~~GI~VILDvV~NH~~~d 469 (872)
T PLN03244 439 TPDDFKRLVDEAHGLGLLVFLDIVHSYAAAD 469 (872)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecCccCCCc
Confidence 5777999999999999999999999866544
No 455
>PRK11823 DNA repair protein RadA; Provisional
Probab=25.63 E-value=1.1e+02 Score=31.38 Aligned_cols=53 Identities=13% Similarity=0.148 Sum_probs=35.0
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEccccCCC--------ccccCChhhHHHHHHHHHhcCcEEEE
Q 012138 209 GDITALEKIFKESGDQIAGFLFEPIQGEA--------GVIIPPDGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 209 ~d~~~Le~~l~~~~~~~~~vi~epi~n~~--------G~~~~~~~~l~~l~~l~~~~gillI~ 263 (470)
.+++.+.+.+++. +++.|++|+++... |....-.+.+..|.++++++|+.++.
T Consensus 143 ~~l~~i~~~i~~~--~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~~ak~~~itvil 203 (446)
T PRK11823 143 TNLEAILATIEEE--KPDLVVIDSIQTMYSPELESAPGSVSQVRECAAELMRLAKQRGIAVFL 203 (446)
T ss_pred CCHHHHHHHHHhh--CCCEEEEechhhhccccccCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 4678888777664 67889999977532 11111123456789999999985554
No 456
>TIGR00416 sms DNA repair protein RadA. The gene protuct codes for a probable ATP-dependent protease involved in both DNA repair and degradation of proteins, peptides, glycopeptides. Also known as sms. Residues 11-28 of the SEED alignment contain a putative Zn binding domain. Residues 110-117 of the seed contain a putative ATP binding site both documented in Haemophilus and in Listeria monocytogenes. for E.coli see ( J. BACTERIOL. 178:5045-5048(1996)).
Probab=25.63 E-value=1.4e+02 Score=30.58 Aligned_cols=55 Identities=11% Similarity=0.094 Sum_probs=36.0
Q ss_pred ecCCCHHHHHHHHHhcCCCeEEEEEccccCCC--------ccccCChhhHHHHHHHHHhcCcEEE
Q 012138 206 VDFGDITALEKIFKESGDQIAGFLFEPIQGEA--------GVIIPPDGYLKAVRDLCSKYNILMI 262 (470)
Q Consensus 206 ~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~--------G~~~~~~~~l~~l~~l~~~~gillI 262 (470)
+...+++.+.+.+++. +...|++|+++... |.+..-.+.+..|.++++++|+.++
T Consensus 154 ~~e~~~~~I~~~i~~~--~~~~vVIDSIq~l~~~~~~~~~g~~~q~r~~~~~L~~~ak~~giTvl 216 (454)
T TIGR00416 154 LSETNWEQICANIEEE--NPQACVIDSIQTLYSPDISSAPGSVSQVRECTAELMRLAKTRGIAIF 216 (454)
T ss_pred cCCCCHHHHHHHHHhc--CCcEEEEecchhhcccccccCCCCHHHHHHHHHHHHHHHHHhCCEEE
Confidence 3344788888888765 66789999977531 2111123445678899999996443
No 457
>smart00545 JmjN Small domain found in the jumonji family of transcription factors. To date, this domain always co-occurs with the JmjC domain (although the reverse is not true).
Probab=25.48 E-value=80 Score=20.33 Aligned_cols=21 Identities=29% Similarity=0.577 Sum_probs=17.3
Q ss_pred ChhhHHHHHHHHHhcCcEEEE
Q 012138 243 PDGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 243 ~~~~l~~l~~l~~~~gillI~ 263 (470)
+..|++.+.+.+++||+.=|+
T Consensus 15 p~~yi~~i~~~~~~yGi~KIv 35 (42)
T smart00545 15 PLAYISKIRPQAEKYGICKVV 35 (42)
T ss_pred HHHHHHHHHHHHhhCCEEEEE
Confidence 567889999999999987664
No 458
>PF02677 DUF208: Uncharacterized BCR, COG1636; InterPro: IPR003828 This entry describes proteins of unknown function.
Probab=24.95 E-value=2e+02 Score=25.10 Aligned_cols=45 Identities=22% Similarity=0.541 Sum_probs=31.9
Q ss_pred HHHhcCCCeEEEEEccccCCCccccCChhhH---HHHHHHHHhcCcEEEEecccc
Q 012138 217 IFKESGDQIAGFLFEPIQGEAGVIIPPDGYL---KAVRDLCSKYNILMIADEIQS 268 (470)
Q Consensus 217 ~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l---~~l~~l~~~~gillI~Dev~~ 268 (470)
.|.+.+-++.+++.|| .|.|..+|. +++.++|++.|+.+|+++ |.
T Consensus 17 ~L~~~g~~vt~~fyNP------NIhP~~Ey~~R~~~~~~~~~~~~i~~i~~~-Y~ 64 (176)
T PF02677_consen 17 RLREEGFDVTGYFYNP------NIHPYEEYERRLEELKRFAEKLGIPLIEGD-YD 64 (176)
T ss_pred HHHHCCCCeEEEEeCC------CCCcHHHHHHHHHHHHHHHHHcCCCEEecC-CC
Confidence 3444445777888888 355566654 567788999999999998 54
No 459
>PF06406 StbA: StbA protein; InterPro: IPR009440 This entry represents bacterial plasmid segregation proteins ParM and StbA []. They are involved in the control of plasmid partition and required for the accurate segregation of the plasmid. ; PDB: 3IKY_C 3IKU_I 2ZGZ_B 1MWM_A 1MWK_A 2ZHC_A 2ZGY_A 2QU4_A.
Probab=24.93 E-value=1.9e+02 Score=27.96 Aligned_cols=38 Identities=24% Similarity=0.173 Sum_probs=24.6
Q ss_pred CCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCc
Q 012138 131 GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCF 176 (470)
Q Consensus 131 ~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~y 176 (470)
..++|+|+.||+.-+.-+++..... +....++..+|.|
T Consensus 272 ~~~~I~~vGGGA~ll~~~Ik~~~~~--------~~~~i~i~~~pqf 309 (318)
T PF06406_consen 272 DIDRIFFVGGGAILLKDAIKEAFPV--------PNERIVIVDDPQF 309 (318)
T ss_dssp S-SEEEEESTTHHHHHHHHHHHHT----------GGGEE--SSGGG
T ss_pred cCCeEEEECCcHHHHHHHHHHhhCC--------CCCcEEECCCchh
Confidence 4678999999999999999876431 1334566565654
No 460
>COG0514 RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair]
Probab=24.92 E-value=1.3e+02 Score=31.79 Aligned_cols=69 Identities=25% Similarity=0.299 Sum_probs=39.9
Q ss_pred CCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCcccCCccccccCC--CCcceeecc---ccccC
Q 012138 223 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE--VRPDMVILG---KALGG 297 (470)
Q Consensus 223 ~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g~~G~~~~~~~~~--~~pdi~s~s---K~l~g 297 (470)
.+.+.+++.|-. .. ++.+++.|. +-.-.++++||+|+ .+.|| +.||..-++ +.+.
T Consensus 106 g~~klLyisPEr-----l~-~~~f~~~L~---~~~i~l~vIDEAHC----------iSqWGhdFRP~Y~~lg~l~~~~~- 165 (590)
T COG0514 106 GQLKLLYISPER-----LM-SPRFLELLK---RLPISLVAIDEAHC----------ISQWGHDFRPDYRRLGRLRAGLP- 165 (590)
T ss_pred CceeEEEECchh-----hc-ChHHHHHHH---hCCCceEEechHHH----------HhhcCCccCHhHHHHHHHHhhCC-
Confidence 368999999921 11 345555555 33457899999998 34443 456655444 3333
Q ss_pred CCcceeEEE--ecHHHH
Q 012138 298 GVIPVSAVL--ADKEVM 312 (470)
Q Consensus 298 G~~~ig~v~--~~~~~~ 312 (470)
.. |+-++. +++.+.
T Consensus 166 ~~-p~~AlTATA~~~v~ 181 (590)
T COG0514 166 NP-PVLALTATATPRVR 181 (590)
T ss_pred CC-CEEEEeCCCChHHH
Confidence 33 666664 344433
No 461
>PF07905 PucR: Purine catabolism regulatory protein-like family; InterPro: IPR012914 This domain is found in the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR, O32138 from SWISSPROT). PucR is thought to be a transcriptional regulator of genes involved in the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression []. The other members of this family are also putative regulatory proteins.
Probab=24.76 E-value=2e+02 Score=23.28 Aligned_cols=47 Identities=19% Similarity=0.249 Sum_probs=28.9
Q ss_pred CHHHHHHHHHhcC-CCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEE
Q 012138 210 DITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 210 d~~~Le~~l~~~~-~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~ 263 (470)
+.+.+.+.+++.. .+++++++..... -.-.| +++.+.|++++++||.
T Consensus 57 ~~~~~~~~i~~L~~~~~agL~i~~~~~--~~~iP-----~~~i~~A~~~~lPli~ 104 (123)
T PF07905_consen 57 DEEELREFIRELAEKGAAGLGIKTGRY--LDEIP-----EEIIELADELGLPLIE 104 (123)
T ss_pred CHHHHHHHHHHHHHCCCeEEEEeccCc--cccCC-----HHHHHHHHHcCCCEEE
Confidence 4455555554421 2677777755211 11332 7889999999999885
No 462
>PRK07106 5-aminoimidazole-4-carboxamide ribonucleotide transformylase; Provisional
Probab=24.41 E-value=1.5e+02 Score=29.40 Aligned_cols=44 Identities=25% Similarity=0.385 Sum_probs=31.4
Q ss_pred eecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEE
Q 012138 205 KVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 205 ~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~ 263 (470)
+||+. |.++.+.+. .+.+|+ .|+|.+-+ +++++.|++||+-++.
T Consensus 339 FFPF~--D~Id~Aa~~---GV~aIi-----QPGGSiRD-----~evI~aane~giaMvf 382 (390)
T PRK07106 339 FFPFG--DNIERAAKS---GVKYIA-----QPGGSIRD-----DNVIETCNKYGMTMAF 382 (390)
T ss_pred cCCCC--chHHHHHHc---CCEEEE-----CCCCCCCc-----HHHHHHHHHhCCEEEE
Confidence 45554 455555554 666664 36899985 7889999999998874
No 463
>COG4294 Uve UV damage repair endonuclease [DNA replication, recombination, and repair]
Probab=24.35 E-value=6.3e+02 Score=24.17 Aligned_cols=102 Identities=15% Similarity=0.135 Sum_probs=55.0
Q ss_pred CCCe-EEecCChhHHHHHHHHHHHHhchhcc--cCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeec
Q 012138 131 GYDM-VLPMNTGAEGVETALKLARKWGYVKK--KFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVD 207 (470)
Q Consensus 131 ~~~~-v~~~~sGteA~~~al~~~~~~~~~~~--~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (470)
..++ +++.+-.-+-...+++....+...-+ |+++ +..++..-++-||....
T Consensus 135 HPdQf~vl~S~~~eV~~ssir~layH~r~l~~mgl~~-Rs~~~lhlgg~~gGK~~------------------------- 188 (347)
T COG4294 135 HPDQFTVLNSPREEVVDSSIRDLAYHYRILDGMGLAE-RSVWNLHLGGTHGGKKE------------------------- 188 (347)
T ss_pred cCCceEEecCCchHHHHHHHHHHHHHHHHHhhcCCCc-CCceEEEeccccCCchh-------------------------
Confidence 3455 45555566777888885543322222 3333 33444433333443211
Q ss_pred CCCHHHHHHHHHhcCCCeEEE-EEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecccc
Q 012138 208 FGDITALEKIFKESGDQIAGF-LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 268 (470)
Q Consensus 208 ~~d~~~Le~~l~~~~~~~~~v-i~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~ 268 (470)
-.+++.+.+.+.++.++.- .+|. .-..+- .+++..+|.+-+|+++.|--|-
T Consensus 189 --~~eqf~kni~~LP~~vksRl~LEN----Dd~sYs----~eelL~lCek~~iPlVfD~HHh 240 (347)
T COG4294 189 --RLEQFIKNIQRLPDSVKSRLTLEN----DDKSYS----TEELLPLCEKLNIPLVFDAHHH 240 (347)
T ss_pred --HHHHHHHHHhhcCHHHHHhheeec----cccccc----HHHHHHHHHHhCCCEEEechhh
Confidence 2455555555444444332 2444 122332 7888999999999999996554
No 464
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=24.33 E-value=6.7e+02 Score=24.47 Aligned_cols=23 Identities=22% Similarity=0.248 Sum_probs=17.9
Q ss_pred hhHHHHHHHHHhcCcEEEEeccc
Q 012138 245 GYLKAVRDLCSKYNILMIADEIQ 267 (470)
Q Consensus 245 ~~l~~l~~l~~~~gillI~Dev~ 267 (470)
.....+.++|+++|+.+|+.--.
T Consensus 147 ~~~~~l~~~A~~~gi~~Il~G~~ 169 (343)
T TIGR03573 147 AIFASVYQVALKFNIPLIIWGEN 169 (343)
T ss_pred HHHHHHHHHHHHhCCCEEEeCCC
Confidence 33678889999999999886433
No 465
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=24.29 E-value=4.4e+02 Score=25.24 Aligned_cols=99 Identities=18% Similarity=0.171 Sum_probs=53.1
Q ss_pred eEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCC--CH
Q 012138 134 MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG--DI 211 (470)
Q Consensus 134 ~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d~ 211 (470)
..+|..+|.-+-...-++++. |..+||.+.+.= ....-+...++ +..+.+++|+ |.
T Consensus 64 aTVFGAtGFlGryvvnklak~----------GSQviiPyR~d~--~~~r~lkvmGd----------LGQvl~~~fd~~De 121 (391)
T KOG2865|consen 64 ATVFGATGFLGRYVVNKLAKM----------GSQVIIPYRGDE--YDPRHLKVMGD----------LGQVLFMKFDLRDE 121 (391)
T ss_pred EEEecccccccHHHHHHHhhc----------CCeEEEeccCCc--cchhheeeccc----------ccceeeeccCCCCH
Confidence 346777888777777666654 554565543321 00111111111 1235566665 89
Q ss_pred HHHHHHHHhcCCCeEEEEEccc--cCCCccccC---ChhhHHHHHHHHHhcCc
Q 012138 212 TALEKIFKESGDQIAGFLFEPI--QGEAGVIIP---PDGYLKAVRDLCSKYNI 259 (470)
Q Consensus 212 ~~Le~~l~~~~~~~~~vi~epi--~n~~G~~~~---~~~~l~~l~~l~~~~gi 259 (470)
+.++++++.. + |++|-+ .-+|+..-- ...--++|+.+|++-|+
T Consensus 122 dSIr~vvk~s--N---VVINLIGrd~eTknf~f~Dvn~~~aerlAricke~GV 169 (391)
T KOG2865|consen 122 DSIRAVVKHS--N---VVINLIGRDYETKNFSFEDVNVHIAERLARICKEAGV 169 (391)
T ss_pred HHHHHHHHhC--c---EEEEeeccccccCCcccccccchHHHHHHHHHHhhCh
Confidence 9999999763 2 333332 223433210 01125789999999886
No 466
>COG1891 Uncharacterized protein conserved in archaea [Function unknown]
Probab=24.18 E-value=4.9e+02 Score=22.75 Aligned_cols=66 Identities=17% Similarity=0.220 Sum_probs=38.1
Q ss_pred cCCCCCHHHHHHHHHHHHHccccC---CCC-CCCcHHHHHHHHhhhhCCCeE----EecCChhHHHHHHHHHHH
Q 012138 88 NQGHCHPKIMKALQEQAEKLTLSS---RAF-YNDKFPVFAERLTSMFGYDMV----LPMNTGAEGVETALKLAR 153 (470)
Q Consensus 88 ~lG~~~p~v~~a~~~~~~~~~~~~---~~~-~~~~~~~l~~~l~~~~~~~~v----~~~~sGteA~~~al~~~~ 153 (470)
+||-+-|.+++.+.+........+ ... +.+-...++..=+...|.+.+ +=+.+-.||++..-...+
T Consensus 33 SLGANFPWvIr~i~Ev~p~d~~vSAT~GDvpYKPGT~slAalGaav~GaDYiKVGLYg~kn~~eA~e~m~~vvr 106 (235)
T COG1891 33 SLGANFPWVIREIREVVPEDQEVSATVGDVPYKPGTASLAALGAAVAGADYIKVGLYGTKNEEEALEVMKNVVR 106 (235)
T ss_pred cccCCChHHHHHHHHhCccceeeeeeecCCCCCCchHHHHHHHhHhhCCceEEEeecccccHHHHHHHHHHHHH
Confidence 477788999999988775432211 112 334445555554445576654 334556677776554443
No 467
>TIGR03853 matur_matur probable metal-binding protein. This protein family was identified by searching with a phylogenetic profile based on an anaerobic sulfatase-maturase enzyme, which contains multiple 4Fe-4S clusters. The linkages by phylogenetic profiling and by iron-sulfur cluster-related motifs together suggest this protein may be an accessory protein to certain maturases in sulfatase/maturase systems.
Probab=24.16 E-value=1.3e+02 Score=22.32 Aligned_cols=32 Identities=13% Similarity=0.117 Sum_probs=24.3
Q ss_pred cHHHHHHHHhhhhCCCeEEecCChhHHHHHHH
Q 012138 118 KFPVFAERLTSMFGYDMVLPMNTGAEGVETAL 149 (470)
Q Consensus 118 ~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al 149 (470)
...+|.+.+.+.+|.+.-+.|+|+..-....|
T Consensus 19 t~~~L~~~i~~~FG~~arFhTCSa~~m~a~~L 50 (77)
T TIGR03853 19 TRESLKAAIEQKFGEDARFHTCSAEGMTADEL 50 (77)
T ss_pred CHHHHHHHHHHHhCCCceEeecccccCCHHHH
Confidence 46889999999999999898888654433333
No 468
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=24.12 E-value=63 Score=26.49 Aligned_cols=39 Identities=26% Similarity=0.388 Sum_probs=20.8
Q ss_pred HHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEe
Q 012138 213 ALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIAD 264 (470)
Q Consensus 213 ~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~D 264 (470)
.+++.+.. ++.+||+.- |... -+.+.++|++++++|+.=
T Consensus 73 ~l~~l~~~---~~P~iIvt~-----~~~~-----p~~l~e~a~~~~ipll~t 111 (127)
T PF02603_consen 73 RLEKLFSY---NPPCIIVTR-----GLEP-----PPELIELAEKYNIPLLRT 111 (127)
T ss_dssp HHHHHCTT---T-S-EEEET-----TT--------HHHHHHHHHCT--EEEE
T ss_pred HHHHHhCC---CCCEEEEEC-----cCCC-----CHHHHHHHHHhCCcEEEc
Confidence 34555544 666676544 1222 477789999999988753
No 469
>PRK09461 ansA cytoplasmic asparaginase I; Provisional
Probab=24.06 E-value=2.2e+02 Score=27.81 Aligned_cols=54 Identities=7% Similarity=0.214 Sum_probs=35.3
Q ss_pred CHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCC
Q 012138 210 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 270 (470)
Q Consensus 210 d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~ 270 (470)
|.+.|+.++++ ..+++|++. .+.+. +.+.+++++.|.++.+ .|++++. -.|+..
T Consensus 222 ~~~~l~~~~~~---~~~GiVl~~-~G~Gn-~p~~~~~~~~l~~~~~-~Gi~VV~-~Sr~~~ 275 (335)
T PRK09461 222 SAEVVRNFLRQ---PVKALILRS-YGVGN-APQNPALLQELKEASE-RGIVVVN-LTQCMS 275 (335)
T ss_pred CHHHHHHHHhC---CCCEEEEcc-CCCCC-CCCCHHHHHHHHHHHH-CCCEEEE-eCCCCC
Confidence 67888887765 678999998 65444 4324677777776664 5776654 344433
No 470
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=24.01 E-value=2.1e+02 Score=27.33 Aligned_cols=53 Identities=19% Similarity=0.401 Sum_probs=37.3
Q ss_pred HHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccccCCc
Q 012138 211 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 271 (470)
Q Consensus 211 ~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~~g~g 271 (470)
.+++|+.+.+. ..+.+-+.|... | ..+....+..+.+.|.++|+++++ |+|.+
T Consensus 115 ~~E~er~v~~~--gf~g~~l~p~~~--~-~~~~~~~~~pi~~~a~~~gvpv~i---htG~~ 167 (293)
T COG2159 115 AEELERRVREL--GFVGVKLHPVAQ--G-FYPDDPRLYPIYEAAEELGVPVVI---HTGAG 167 (293)
T ss_pred HHHHHHHHHhc--CceEEEeccccc--C-CCCCChHHHHHHHHHHHcCCCEEE---EeCCC
Confidence 45677777764 677888877322 1 223555589999999999999998 66543
No 471
>COG2081 Predicted flavoproteins [General function prediction only]
Probab=23.99 E-value=4.2e+02 Score=26.56 Aligned_cols=58 Identities=12% Similarity=0.080 Sum_probs=39.3
Q ss_pred CHHHHHHHHHhcCCCeEEEEEccccCCCccccCC----hhhHHHHHHHHHhcCcEEEEeccccCCcccC
Q 012138 210 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPP----DGYLKAVRDLCSKYNILMIADEIQSGLARSG 274 (470)
Q Consensus 210 d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~----~~~l~~l~~l~~~~gillI~Dev~~g~g~~G 274 (470)
+++++.+.++.+ .++... + ..|.++|. ..-++.+.+-|++.|+-+.......++-+.+
T Consensus 80 t~~d~i~~~e~~--Gi~~~e-~----~~Gr~Fp~sdkA~~Iv~~ll~~~~~~gV~i~~~~~v~~v~~~~ 141 (408)
T COG2081 80 TPEDFIDWVEGL--GIALKE-E----DLGRMFPDSDKASPIVDALLKELEALGVTIRTRSRVSSVEKDD 141 (408)
T ss_pred CHHHHHHHHHhc--CCeeEE-c----cCceecCCccchHHHHHHHHHHHHHcCcEEEecceEEeEEecC
Confidence 678888888775 333332 2 24666644 4557888888999999998877666665554
No 472
>PRK05773 3,4-dihydroxy-2-butanone 4-phosphate synthase; Validated
Probab=23.85 E-value=1.1e+02 Score=27.75 Aligned_cols=34 Identities=6% Similarity=0.167 Sum_probs=26.6
Q ss_pred CeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEE
Q 012138 224 QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 224 ~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~ 263 (470)
..++++||-+ +.+| ... ++++.++|++||+.+|.
T Consensus 176 ~P~~vicEil-~~~~-~~~----~~~~~~fA~~~~l~~is 209 (219)
T PRK05773 176 EPSAVIAEML-DEKL-SLS----KEKAKKIAKNLGFPLVE 209 (219)
T ss_pred CccEEEEEEe-CCCC-CcC----HHHHHHHHHHcCCcEEE
Confidence 4688889884 4555 554 88899999999999874
No 473
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=23.77 E-value=6e+02 Score=23.65 Aligned_cols=41 Identities=17% Similarity=0.282 Sum_probs=25.1
Q ss_pred CHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEE
Q 012138 210 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 210 d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~ 263 (470)
++..+.+.++++ ++++|++|+ +.+ . +.+..++++.|+.++.
T Consensus 205 ~l~~l~~~ik~~--~v~~if~e~-~~~-------~---~~~~~la~~~g~~v~~ 245 (266)
T cd01018 205 DLKRLIDLAKEK--GVRVVFVQP-QFS-------T---KSAEAIAREIGAKVVT 245 (266)
T ss_pred HHHHHHHHHHHc--CCCEEEEcC-CCC-------c---HHHHHHHHHcCCeEEE
Confidence 345555666654 788888888 321 1 2234677888876654
No 474
>TIGR03772 anch_rpt_subst anchored repeat ABC transporter, substrate-binding protein. Members of this protein family are ABC transporter permease subunits as identified by pfam00950, but additionally contain the Actinobacterial insert domain described by TIGR03769. Some homologs (lacking the insert) have been described as transporters of manganese or of chelated iron. Members of this family typically are found along with an ATP-binding cassette protein, a permease, and an LPXTG-anchored protein with two or three copies of the TIGR03769 insert that occurs just once in this protein family.
Probab=23.73 E-value=2.8e+02 Score=28.63 Aligned_cols=117 Identities=7% Similarity=0.097 Sum_probs=0.0
Q ss_pred HHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCc---------cccccchhcccCCc
Q 012138 120 PVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCF---------HGRTLAAISMSCDN 190 (470)
Q Consensus 120 ~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~y---------hg~~~~~~~~~~~~ 190 (470)
..+++.|.+..+...-.|..+...-..-.-.+-..+.-....+|..+..+++..+.| .-.......-...+
T Consensus 325 ~~Ia~~LselDP~na~~Y~~Na~ay~~eL~~Ld~~~~~~la~ip~k~r~vvt~H~af~YLa~~YGL~~~~~~~~~~~~eP 404 (479)
T TIGR03772 325 EVIRDKLIEVDPRGAQAYRSNASAYIHRLERLDTYVRRTIATIPPSRRHLITTHDAYSYLGQAYGLNIAGFVTPNPAVEP 404 (479)
T ss_pred HHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCEEEEECCcHHHHHHHCCCeEEeeeccCCCCCC
Q ss_pred ccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEE
Q 012138 191 EAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~ 263 (470)
..+ ++..|.+.++++ ++++|++||-.+ ++ .+.+..++++.|+.++.
T Consensus 405 S~~----------------~L~~Li~~IK~~--~V~~IF~Epq~~-------~~--~~~l~~IA~e~Gv~V~~ 450 (479)
T TIGR03772 405 SLA----------------DRRRLTRTIENL--KVPAVFLEPNLA-------AR--STTLNEIADELGVRVCA 450 (479)
T ss_pred CHH----------------HHHHHHHHHHHc--CCCEEEEeCCCC-------Cc--hHHHHHHHHHcCCcEEe
No 475
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=23.55 E-value=1.3e+02 Score=25.99 Aligned_cols=52 Identities=15% Similarity=0.204 Sum_probs=28.4
Q ss_pred HHHHHHHHHhcCCCeEEEEEcccc-CCC-ccccCC----hhhHHHHHHHHHhcCcEEE
Q 012138 211 ITALEKIFKESGDQIAGFLFEPIQ-GEA-GVIIPP----DGYLKAVRDLCSKYNILMI 262 (470)
Q Consensus 211 ~~~Le~~l~~~~~~~~~vi~epi~-n~~-G~~~~~----~~~l~~l~~l~~~~gillI 262 (470)
++.+-+.+.+...+++.|++.|+. ... ...... ..+-+.+.++|+++|+.+|
T Consensus 95 l~~li~~i~~~~~~~~iil~t~~p~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v 152 (188)
T cd01827 95 YETMIDSFQALPSKPKIYICYPIPAYYGDGGFINDNIIKKEIQPMIDKIAKKLNLKLI 152 (188)
T ss_pred HHHHHHHHHHHCCCCeEEEEeCCcccccCCCccchHHHHHHHHHHHHHHHHHcCCcEE
Confidence 344444444433456677777632 111 110101 3456778899999998776
No 476
>PRK08883 ribulose-phosphate 3-epimerase; Provisional
Probab=23.31 E-value=5.6e+02 Score=23.21 Aligned_cols=51 Identities=24% Similarity=0.332 Sum_probs=26.2
Q ss_pred CHHHHHHHHHhcCCCeEEEE-EccccCCCcccc--CChhhHHHHHHHHHhcC--cEEEEe
Q 012138 210 DITALEKIFKESGDQIAGFL-FEPIQGEAGVII--PPDGYLKAVRDLCSKYN--ILMIAD 264 (470)
Q Consensus 210 d~~~Le~~l~~~~~~~~~vi-~epi~n~~G~~~--~~~~~l~~l~~l~~~~g--illI~D 264 (470)
.++.++..+..- +.-.++ ++| +-+|.-+ ...+.++++.++.+++| +++.+|
T Consensus 118 p~~~i~~~l~~~--D~vlvMtV~P--GfgGq~fi~~~lekI~~l~~~~~~~~~~~~I~vd 173 (220)
T PRK08883 118 PLHHLEYIMDKV--DLILLMSVNP--GFGGQSFIPHTLDKLRAVRKMIDESGRDIRLEID 173 (220)
T ss_pred CHHHHHHHHHhC--CeEEEEEecC--CCCCceecHhHHHHHHHHHHHHHhcCCCeeEEEE
Confidence 467788877653 333344 555 3345433 22333444445544444 666666
No 477
>PF03796 DnaB_C: DnaB-like helicase C terminal domain; InterPro: IPR007694 The hexameric helicase DnaB unwinds the DNA duplex at the Escherichia coli chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis. ; GO: 0003678 DNA helicase activity, 0005524 ATP binding, 0006260 DNA replication; PDB: 1Q57_E 1E0K_D 1E0J_B 1CR2_A 1CR4_A 1CR1_A 1CR0_A 1MI8_A 2R6D_B 2R6C_C ....
Probab=23.28 E-value=2.2e+02 Score=26.41 Aligned_cols=54 Identities=17% Similarity=0.205 Sum_probs=34.8
Q ss_pred CHHHHHHHHHhc---CCCeEEEEEccccCCCc--cccCChh----hHHHHHHHHHhcCcEEEE
Q 012138 210 DITALEKIFKES---GDQIAGFLFEPIQGEAG--VIIPPDG----YLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 210 d~~~Le~~l~~~---~~~~~~vi~epi~n~~G--~~~~~~~----~l~~l~~l~~~~gillI~ 263 (470)
+++++++.+... ..++.+|+++.++--.. ....... ..++|.++|+++|+++|+
T Consensus 113 ~~~~i~~~i~~~~~~~~~~~~v~IDyl~ll~~~~~~~~~~~~~~~i~~~Lk~lA~~~~i~vi~ 175 (259)
T PF03796_consen 113 TIDDIESKIRRLKREGKKVDVVFIDYLQLLKSEDSSDNRRQEIGEISRELKALAKELNIPVIA 175 (259)
T ss_dssp BHHHHHHHHHHHHHHSTTEEEEEEEEGGGSBTSCSSSCCHHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred CHHHHHHHHHHHHhhccCCCEEEechHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 566666666432 14788999999665322 1111222 245789999999999987
No 478
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=23.25 E-value=1.2e+02 Score=28.38 Aligned_cols=49 Identities=10% Similarity=0.232 Sum_probs=34.3
Q ss_pred CHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEec
Q 012138 210 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 265 (470)
Q Consensus 210 d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~De 265 (470)
+.+.+++.+. +.-++++-|-.+..-. --..+++|.+++++.++++++|.
T Consensus 91 av~~i~k~L~----RlhavVIGPGLGRdp~---~~k~i~~iley~~~~dvP~VIDa 139 (306)
T KOG3974|consen 91 AVDIIEKLLQ----RLHAVVIGPGLGRDPA---ILKEIAKILEYLRGKDVPLVIDA 139 (306)
T ss_pred hHhHHHHHHh----heeEEEECCCCCCCHH---HHHHHHHHHHHHhcCCCcEEEcC
Confidence 3455666565 6778888774443222 33457889999999999999994
No 479
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=23.21 E-value=97 Score=32.57 Aligned_cols=31 Identities=19% Similarity=0.172 Sum_probs=25.4
Q ss_pred ChhhHHHHHHHHHhcCcEEEEeccccCCccc
Q 012138 243 PDGYLKAVRDLCSKYNILMIADEIQSGLARS 273 (470)
Q Consensus 243 ~~~~l~~l~~l~~~~gillI~Dev~~g~g~~ 273 (470)
+.+.++++++.|+++|+-+|.|=|+..++..
T Consensus 158 ~~~e~k~lV~~aH~~Gi~VilD~V~NH~~~~ 188 (542)
T TIGR02402 158 GPDDLKALVDAAHGLGLGVILDVVYNHFGPE 188 (542)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCCCCCc
Confidence 4567999999999999999999888755443
No 480
>PRK10812 putative DNAse; Provisional
Probab=23.06 E-value=6.1e+02 Score=23.71 Aligned_cols=95 Identities=12% Similarity=0.103 Sum_probs=54.1
Q ss_pred CCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEEEccCccccccchhcccCCcccccCCCCCCCCeeeecCCC
Q 012138 131 GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD 210 (470)
Q Consensus 131 ~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (470)
|.+.++.++...+....++.++.++ + .|. ..-++|-+... ...+
T Consensus 33 gv~~~~~~~~~~~~~~~~~~l~~~~--------~---~v~-~~~GiHP~~~~------------------------~~~~ 76 (265)
T PRK10812 33 DVKFCLAVATTLPGYRHMRDLVGER--------D---NVV-FSCGVHPLNQD------------------------EPYD 76 (265)
T ss_pred CCCEEEEeCCCHHHHHHHHHHHhhC--------C---CeE-EEEEeCCCCCC------------------------ChhH
Confidence 6777777777777788888887653 2 122 22334532110 0015
Q ss_pred HHHHHHHHHhcCCCeEEE--E-EccccCCCccccCChhhHHHHHHHHHhcCcEEEEe
Q 012138 211 ITALEKIFKESGDQIAGF--L-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIAD 264 (470)
Q Consensus 211 ~~~Le~~l~~~~~~~~~v--i-~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~D 264 (470)
++.|++.+.. +++.+| + ++........-. ..+.+++..++|+++|.++++=
T Consensus 77 ~~~l~~~~~~--~~vvaIGEiGLD~~~~~~~~~~-Q~~vf~~ql~lA~e~~~Pv~iH 130 (265)
T PRK10812 77 VEELRRLAAE--EGVVAMGETGLDYYYTPETKVR-QQESFRHHIQIGRELNKPVIVH 130 (265)
T ss_pred HHHHHHHhcC--CCEEEEEeeecCcCCCCCCHHH-HHHHHHHHHHHHHHhCCCeEEE
Confidence 6777766643 244444 2 343211111222 5677888999999999988863
No 481
>PF13872 AAA_34: P-loop containing NTP hydrolase pore-1
Probab=22.68 E-value=60 Score=31.02 Aligned_cols=26 Identities=19% Similarity=0.410 Sum_probs=21.6
Q ss_pred ChhhHHHHHHHH-HhcCcEEEEecccc
Q 012138 243 PDGYLKAVRDLC-SKYNILMIADEIQS 268 (470)
Q Consensus 243 ~~~~l~~l~~l~-~~~gillI~Dev~~ 268 (470)
....+++|.+.| +.++.+||+||+|.
T Consensus 157 ~~sRl~ql~~W~g~dfdgvivfDEcH~ 183 (303)
T PF13872_consen 157 YRSRLDQLVDWCGEDFDGVIVFDECHK 183 (303)
T ss_pred ccchHHHHHHHHhcCCCceEEeccchh
Confidence 345689999999 45788999999998
No 482
>PRK00881 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional
Probab=22.68 E-value=1.7e+02 Score=30.28 Aligned_cols=40 Identities=20% Similarity=0.174 Sum_probs=27.5
Q ss_pred HHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEE
Q 012138 211 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 211 ~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~ 263 (470)
++.++.+.+. .+++|+. |+|++- -+++++.|++||+.++.
T Consensus 466 ~Dtie~aa~~---Gv~aIiq-----PgGSir-----D~evI~aAne~gIamvf 505 (513)
T PRK00881 466 RDGVEAAAKA---GITAIIQ-----PGGSIR-----DEEVIAAADEHGIAMVF 505 (513)
T ss_pred hhHHHHHHHc---CCeEEEe-----CCCCCC-----hHHHHHHHHHcCCEEEE
Confidence 4666666654 5666654 345544 47888999999998875
No 483
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=22.10 E-value=7.1e+02 Score=23.94 Aligned_cols=138 Identities=12% Similarity=0.092 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCcHHHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCC-cEEEE-
Q 012138 94 PKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDE-AIIVS- 171 (470)
Q Consensus 94 p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~-~~ii~- 171 (470)
.++.+.+.+.++.+... .......+++.-+++..-..+++|-+-+..+...|+.+.+ .++ -.|++
T Consensus 86 ~~~k~~l~e~~~~~~~e----~~~~~~~I~~~a~~~i~~g~~ILT~~~S~tv~~~l~~A~~---------~~k~~~V~v~ 152 (310)
T PRK08535 86 EEARESVIERAEEFIES----SENAVEKIGEIGAKRIRDGDVIMTHCNSSAALSVIKTAHE---------QGKDIEVIAT 152 (310)
T ss_pred HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHcCCCCEEEEeCCcHHHHHHHHHHHH---------CCCeEEEEEe
Confidence 45555555555443210 0111234444444554444567777767777777776543 122 23333
Q ss_pred -EccCccccccchhcccCCcccccCCCCCCCCeeeecCCCHHHHHHHHHhcCCCeEEEE-EccccCCCccccCChhhHHH
Q 012138 172 -CCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFL-FEPIQGEAGVIIPPDGYLKA 249 (470)
Q Consensus 172 -~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi-~epi~n~~G~~~~~~~~l~~ 249 (470)
-.|.+.|+ ..+..+.... -++..++ | ..+-..+.+ -.+.++ .+.+...+|.+- ..+ --.
T Consensus 153 EsrP~~~G~-~~a~~L~~~G----------I~vtlI~--D-sav~~~m~~---vd~VivGAd~v~~nG~v~n-kiG-T~~ 213 (310)
T PRK08535 153 ETRPRNQGH-ITAKELAEYG----------IPVTLIV--D-SAVRYFMKD---VDKVVVGADAITANGAVIN-KIG-TSQ 213 (310)
T ss_pred cCCchhhHH-HHHHHHHHCC----------CCEEEEe--h-hHHHHHHHh---CCEEEECccEEecCCCEEe-HHh-HHH
Confidence 22333442 2222221110 1123332 2 334445543 224444 666654444443 333 345
Q ss_pred HHHHHHhcCcEEEE
Q 012138 250 VRDLCSKYNILMIA 263 (470)
Q Consensus 250 l~~l~~~~gillI~ 263 (470)
+.-+|+.|++++++
T Consensus 214 ~A~~Ak~~~vPv~V 227 (310)
T PRK08535 214 IALAAHEARVPFMV 227 (310)
T ss_pred HHHHHHHhCCCEEE
Confidence 66788999999886
No 484
>PLN02672 methionine S-methyltransferase
Probab=22.08 E-value=6.5e+02 Score=29.05 Aligned_cols=50 Identities=4% Similarity=-0.026 Sum_probs=33.1
Q ss_pred HHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEeccc
Q 012138 212 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 267 (470)
Q Consensus 212 ~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev~ 267 (470)
+.+.++++.. ++..|+..--+. ... +-.-++.|.+.+++-|+.|+.|+.-
T Consensus 517 ~~~~~~~~~~--~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (1082)
T PLN02672 517 DLVIELIKKL--KPQVVVTGMADF---EMR-TSTAFEHLLNVTAEIGARLFLDISD 566 (1082)
T ss_pred hHHHHHHHhC--CCeEEEEeccch---hhh-hHHHHHHHHHHHHhhCcEEEEehhh
Confidence 4566777765 555665322222 222 4444899999999999999999753
No 485
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=21.87 E-value=91 Score=32.16 Aligned_cols=28 Identities=18% Similarity=0.065 Sum_probs=23.3
Q ss_pred ChhhHHHHHHHHHhcCcEEEEeccccCC
Q 012138 243 PDGYLKAVRDLCSKYNILMIADEIQSGL 270 (470)
Q Consensus 243 ~~~~l~~l~~l~~~~gillI~Dev~~g~ 270 (470)
+.+.+++|++-|+++|+.||+|-|.-..
T Consensus 79 t~~dl~~Li~~~H~~Gi~vi~D~V~NH~ 106 (479)
T PRK09441 79 TKEELLNAIDALHENGIKVYADVVLNHK 106 (479)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcccc
Confidence 4566999999999999999999887643
No 486
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=21.72 E-value=1.9e+02 Score=25.31 Aligned_cols=50 Identities=18% Similarity=0.262 Sum_probs=28.6
Q ss_pred HHHHHHHHHhcCCCeEEEEEccccC-C---Cc-cccCChhhHHHHHHHHHhcCcEEE
Q 012138 211 ITALEKIFKESGDQIAGFLFEPIQG-E---AG-VIIPPDGYLKAVRDLCSKYNILMI 262 (470)
Q Consensus 211 ~~~Le~~l~~~~~~~~~vi~epi~n-~---~G-~~~~~~~~l~~l~~l~~~~gillI 262 (470)
+..+-+.+++. ....|+++|+.. + .+ ....-..+-+.+.++|+++|+.++
T Consensus 96 l~~ii~~~~~~--~~~~il~tp~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v 150 (198)
T cd01821 96 LRRYIAEARAK--GATPILVTPVTRRTFDEGGKVEDTLGDYPAAMRELAAEEGVPLI 150 (198)
T ss_pred HHHHHHHHHHC--CCeEEEECCccccccCCCCcccccchhHHHHHHHHHHHhCCCEE
Confidence 33343334443 456677777321 1 11 111234667899999999998874
No 487
>PF07071 DUF1341: Protein of unknown function (DUF1341); InterPro: IPR010763 Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.; PDB: 3NZR_D 3LM7_A 3M0Z_B 3M6Y_A 3N73_A 3MUX_A.
Probab=21.70 E-value=67 Score=28.55 Aligned_cols=24 Identities=13% Similarity=0.277 Sum_probs=9.7
Q ss_pred hhHHHHHHHHHhcCcEEEEecccc
Q 012138 245 GYLKAVRDLCSKYNILMIADEIQS 268 (470)
Q Consensus 245 ~~l~~l~~l~~~~gillI~Dev~~ 268 (470)
+-+++|.++|.+.|+..|+=-+|+
T Consensus 189 ~N~~~I~~i~l~aGv~~viPHiYs 212 (218)
T PF07071_consen 189 DNFEEIVKICLDAGVEKVIPHIYS 212 (218)
T ss_dssp TTHHHHHHHHHHTT-S-B--EE-G
T ss_pred HHHHHHHHHHHHcCCCeeccchhh
Confidence 335555555555555544444443
No 488
>cd01016 TroA Metal binding protein TroA. These proteins have been shown to function as initial receptors in ABC transport of Zn2+ and possibly Fe3+ in many eubacterial species. The TroA proteins belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=21.52 E-value=2.7e+02 Score=26.26 Aligned_cols=43 Identities=19% Similarity=0.224 Sum_probs=28.9
Q ss_pred CHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEE
Q 012138 210 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMI 262 (470)
Q Consensus 210 d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI 262 (470)
++..+.+.++++ ++++|++||-. +....+.|.+.++..|+.+.
T Consensus 198 ~l~~l~~~ik~~--~v~~if~e~~~--------~~~~~~~l~~~~~~~~~~v~ 240 (276)
T cd01016 198 DINELVDLIVER--KIKAIFVESSV--------NQKSIEALQDAVKARGHDVQ 240 (276)
T ss_pred HHHHHHHHHHHc--CCCEEEEeCCC--------CHHHHHHHHHHHhhcCCccc
Confidence 355566666664 88999999933 33447778887877775443
No 489
>TIGR03581 EF_0839 conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.
Probab=21.47 E-value=1.2e+02 Score=27.31 Aligned_cols=27 Identities=4% Similarity=0.052 Sum_probs=18.6
Q ss_pred ChhhHHHHHHHHHhcCcEEEEeccccC
Q 012138 243 PDGYLKAVRDLCSKYNILMIADEIQSG 269 (470)
Q Consensus 243 ~~~~l~~l~~l~~~~gillI~Dev~~g 269 (470)
+.+-+++|.++|.+.|+..|.=-+|+.
T Consensus 187 dl~Nf~~I~~i~ldaGv~kviPHIYss 213 (236)
T TIGR03581 187 DLDNFEEIVQIALDAGVEKVIPHVYSS 213 (236)
T ss_pred cHHhHHHHHHHHHHcCCCeecccccee
Confidence 455567777777777777777666663
No 490
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=21.39 E-value=7.3e+02 Score=23.77 Aligned_cols=117 Identities=12% Similarity=0.032 Sum_probs=56.8
Q ss_pred HHHHHHHhhhhCCCeEEecCChhHHHHHHHHHHHHhchhcccCCCCCcEEEE--EccCccccccchhcccCCcccccCCC
Q 012138 120 PVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVS--CCGCFHGRTLAAISMSCDNEAIRGFG 197 (470)
Q Consensus 120 ~~l~~~l~~~~~~~~v~~~~sGteA~~~al~~~~~~~~~~~~~~~g~~~ii~--~~~~yhg~~~~~~~~~~~~~~~~~~~ 197 (470)
..+++.-.++..-..+++|-+-+..+...++.+.+. ..+-.|++ -.|.+.|+. .+..+....
T Consensus 103 ~~I~~~a~~~i~~g~~ILT~~~S~tv~~~l~~a~~~--------~~~f~V~v~EsrP~~~G~~-~a~~L~~~g------- 166 (301)
T TIGR00511 103 ERIGEIGAKRIRDGDVVMTHCNSEAALSVIKTAFEQ--------GKDIEVIATETRPRKQGHI-TAKELRDYG------- 166 (301)
T ss_pred HHHHHHHHHHcCCCCEEEEECCcHHHHHHHHHHHHc--------CCcEEEEEecCCCcchHHH-HHHHHHHCC-------
Confidence 344444444444445677766666666777655441 01223333 233334422 222222110
Q ss_pred CCCCCeeeecCCCHHHHHHHHHhcCCCeEEEE-EccccCCCccccCChhhHHHHHHHHHhcCcEEEE
Q 012138 198 PLLPGHLKVDFGDITALEKIFKESGDQIAGFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 198 ~~~~~~~~~~~~d~~~Le~~l~~~~~~~~~vi-~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~ 263 (470)
-++..++ | ..+-..+.+ -.+.++ .+.+...+|.+- ..+ --.+.-.|+.|++++++
T Consensus 167 ---I~vtlI~--D-sa~~~~m~~---vd~VivGad~v~~nG~v~n-kiG-T~~lA~~Ak~~~vPv~V 222 (301)
T TIGR00511 167 ---IPVTLIV--D-SAVRYFMKE---VDHVVVGADAITANGALIN-KIG-TSQLALAAREARVPFMV 222 (301)
T ss_pred ---CCEEEEe--h-hHHHHHHHh---CCEEEECccEEecCCCEEE-HHh-HHHHHHHHHHhCCCEEE
Confidence 1123332 3 344445543 234455 666665555554 433 34556788999999886
No 491
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=21.34 E-value=2e+02 Score=23.06 Aligned_cols=42 Identities=7% Similarity=0.072 Sum_probs=25.8
Q ss_pred HHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEecc
Q 012138 211 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 266 (470)
Q Consensus 211 ~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~Dev 266 (470)
++.++++.+. .++.+++.+- .+-+++.++|+++|+.++-..+
T Consensus 69 ~~~v~~~~~~---g~~~v~~~~g-----------~~~~~~~~~a~~~gi~vigp~C 110 (116)
T PF13380_consen 69 PEIVDEAAAL---GVKAVWLQPG-----------AESEELIEAAREAGIRVIGPNC 110 (116)
T ss_dssp HHHHHHHHHH---T-SEEEE-TT-----------S--HHHHHHHHHTT-EEEESS-
T ss_pred HHHHHHHHHc---CCCEEEEEcc-----------hHHHHHHHHHHHcCCEEEeCCc
Confidence 3445555544 5778887662 3368899999999999886654
No 492
>PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B.
Probab=21.31 E-value=1e+02 Score=24.74 Aligned_cols=26 Identities=19% Similarity=0.316 Sum_probs=21.3
Q ss_pred ChhhHHHHHHHHHhcCc-EEEEecccc
Q 012138 243 PDGYLKAVRDLCSKYNI-LMIADEIQS 268 (470)
Q Consensus 243 ~~~~l~~l~~l~~~~gi-llI~Dev~~ 268 (470)
..+.++.+.+..++++. +||+||+|.
T Consensus 72 ~~~l~~~~~~~l~~~~~~~lviDe~~~ 98 (131)
T PF13401_consen 72 SDELRSLLIDALDRRRVVLLVIDEADH 98 (131)
T ss_dssp HHHHHHHHHHHHHHCTEEEEEEETTHH
T ss_pred HHHHHHHHHHHHHhcCCeEEEEeChHh
Confidence 44556888888888887 999999987
No 493
>PF03460 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin-like half domain; InterPro: IPR005117 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively. The Escherichia coli SiR enzyme is a complex composed of two proteins, a flavoprotein alpha-component (SiR-FP) and a hemoprotein beta-component (SiR-HP), and has an alpha(8)beta(4) quaternary structure []. SiR-FP contains both FAD and FMN, while SiR-HP contains a Fe(4)S(4) cluster coupled to a sirohaem through a cysteine bridge. Electrons are transferred from NADPH to FAD, and on to FMN in SiR-FP, from which they are transferred to the metal centre of SiR-HP, where they reduce the siroheme-bound sulphite. SiR-HP has a two-fold symmetry, which generates a distinctive three-domain alpha/beta fold that controls assembly and reactivity []. This entry describes the ferrodoxin-like (alpha/beta sandwich) domain, which consists of a duplication containing two subdomains of this fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3B0H_A 4GEP_A 2GEP_A 2AOP_A 5AOP_A 6GEP_A 4AOP_A 1AOP_A 3AOP_A 8GEP_A ....
Probab=21.04 E-value=60 Score=23.06 Aligned_cols=24 Identities=25% Similarity=0.380 Sum_probs=19.3
Q ss_pred cCCCccccCChhhHHHHHHHHHhcCc
Q 012138 234 QGEAGVIIPPDGYLKAVRDLCSKYNI 259 (470)
Q Consensus 234 ~n~~G~~~~~~~~l~~l~~l~~~~gi 259 (470)
.-|+|.+ +.+.++.|.+++++||.
T Consensus 15 ~~~~G~i--~~~~l~~la~ia~~yg~ 38 (69)
T PF03460_consen 15 RIPGGRI--SAEQLRALAEIAEKYGD 38 (69)
T ss_dssp B-GGGEE--EHHHHHHHHHHHHHHST
T ss_pred eCCCEEE--CHHHHHHHHHHHHHhCC
Confidence 4456777 67889999999999984
No 494
>PRK10949 protease 4; Provisional
Probab=20.99 E-value=1.6e+02 Score=31.56 Aligned_cols=48 Identities=2% Similarity=0.096 Sum_probs=31.2
Q ss_pred HHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEE
Q 012138 212 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 212 ~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~ 263 (470)
+.|+++.++ +++++|++.- ++|+|....+.+-.++|.+ .++.|-++++
T Consensus 354 ~~l~~a~~D--~~vkaVvLrI-nSpGGs~~ase~i~~~i~~-~r~~gKPVva 401 (618)
T PRK10949 354 AQIRDARLD--PKVKAIVLRV-NSPGGSVTASEVIRAELAA-ARAAGKPVVV 401 (618)
T ss_pred HHHHHHHhC--CCCcEEEEEe-cCCCCcHHHHHHHHHHHHH-HHhcCCcEEE
Confidence 334444333 4899999876 8999999955554455555 4666766665
No 495
>PF13378 MR_MLE_C: Enolase C-terminal domain-like; PDB: 3FCP_B 3P0W_D 3VFC_A 3VDG_A 3FJ4_B 3CT2_B 3DGB_A 3V3W_A 3V4B_A 3NO1_E ....
Probab=20.89 E-value=1.4e+02 Score=23.45 Aligned_cols=48 Identities=8% Similarity=0.221 Sum_probs=34.9
Q ss_pred CHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEEec
Q 012138 210 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 265 (470)
Q Consensus 210 d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~De 265 (470)
++.+++++++.. .+..+-+++ .--+|... ..++.++|+++|+.+..=.
T Consensus 6 ~~~~~~~li~~~--a~d~~~~~~-~~~GGit~-----~~~i~~~A~~~gi~~~~h~ 53 (111)
T PF13378_consen 6 SLHDFRRLIEAG--AVDIVQIDP-TRCGGITE-----ALRIAALAEAHGIPVMPHS 53 (111)
T ss_dssp SHHHHHHHHHTT--SCSEEEEBH-HHHTSHHH-----HHHHHHHHHHTT-EEEEBS
T ss_pred CHHHHHHHHHcC--CCCEEEeCc-hhcCCHHH-----HHHHHHHHHHhCCCEEecC
Confidence 688899999863 344566777 33356555 8999999999999988754
No 496
>PRK05583 ribosomal protein L7Ae family protein; Provisional
Probab=20.87 E-value=3e+02 Score=21.62 Aligned_cols=43 Identities=19% Similarity=0.339 Sum_probs=30.0
Q ss_pred HHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEEE
Q 012138 211 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 263 (470)
Q Consensus 211 ~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI~ 263 (470)
.+.+++.++.. ++++||+-. .. ++...+++.+.|+.++++++.
T Consensus 22 ~~~v~~aik~g--k~~lVI~A~-D~-------s~~~kkki~~~~~~~~vp~~~ 64 (104)
T PRK05583 22 YNKCEEAIKKK--KVYLIIISN-DI-------SENSKNKFKNYCNKYNIPYIE 64 (104)
T ss_pred HHHHHHHHHcC--CceEEEEeC-CC-------CHhHHHHHHHHHHHcCCCEEE
Confidence 35566677663 667777533 21 666689999999999998754
No 497
>PRK13789 phosphoribosylamine--glycine ligase; Provisional
Probab=20.84 E-value=4.6e+02 Score=26.58 Aligned_cols=44 Identities=14% Similarity=0.244 Sum_probs=29.4
Q ss_pred cCCCHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEE
Q 012138 207 DFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMI 262 (470)
Q Consensus 207 ~~~d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI 262 (470)
...|.+.|.+.++++ ++.+|++.| ....+..+.+.|++.|+.++
T Consensus 53 ~~~d~~~l~~~a~~~--~iD~Vv~g~----------E~~l~~glad~~~~~Gip~~ 96 (426)
T PRK13789 53 SILDKSSVQSFLKSN--PFDLIVVGP----------EDPLVAGFADWAAELGIPCF 96 (426)
T ss_pred CcCCHHHHHHHHHHc--CCCEEEECC----------chHHHHHHHHHHHHcCCCcC
Confidence 344888888887775 677777655 22225677777777777654
No 498
>PF01248 Ribosomal_L7Ae: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; InterPro: IPR004038 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, ribosomal protein L30 from eukaryotes and archaebacteria, Gadd45 and MyD118 [].; PDB: 2CZW_A 3V7E_B 2QEX_F 1YJ9_F 1VQ8_F 1YJN_F 3I56_F 1VQ6_F 2OTJ_F 1YIJ_F ....
Probab=20.73 E-value=3e+02 Score=20.80 Aligned_cols=46 Identities=17% Similarity=0.235 Sum_probs=29.8
Q ss_pred HHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHH-HHHHHHhcCcEEEEecc
Q 012138 211 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKA-VRDLCSKYNILMIADEI 266 (470)
Q Consensus 211 ~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~-l~~l~~~~gillI~Dev 266 (470)
..++.+.+... +.+++++-. + + ++..... +..+|++++++++.=..
T Consensus 20 ~~~v~k~l~~~--~~~lvilA~-d-----~--~~~~~~~~l~~~c~~~~Ip~~~~~s 66 (95)
T PF01248_consen 20 IKEVLKALKKG--KAKLVILAE-D-----C--SPDSIKKHLPALCEEKNIPYVFVPS 66 (95)
T ss_dssp HHHHHHHHHTT--CESEEEEET-T-----S--SSGHHHHHHHHHHHHTTEEEEEESH
T ss_pred hHHHHHHHHcC--CCcEEEEcC-C-----C--ChhhhcccchhheeccceeEEEECC
Confidence 45666677653 666676544 1 1 2333455 88999999999987554
No 499
>PF13727 CoA_binding_3: CoA-binding domain; PDB: 3NKL_B.
Probab=20.47 E-value=1.8e+02 Score=24.61 Aligned_cols=43 Identities=14% Similarity=0.244 Sum_probs=28.0
Q ss_pred CHHHHHHHHHhcCCCeEEEE-EccccCCCccccCChhhHHHHHHHHHhcCcEEE
Q 012138 210 DITALEKIFKESGDQIAGFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMI 262 (470)
Q Consensus 210 d~~~Le~~l~~~~~~~~~vi-~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI 262 (470)
+.+++.+.++++ .+.-|+ ..| .. +.+.++++.+.|+++++-+.
T Consensus 129 ~~~~l~~~~~~~--~id~v~ial~-~~-------~~~~i~~ii~~~~~~~v~v~ 172 (175)
T PF13727_consen 129 DLDDLPELVREH--DIDEVIIALP-WS-------EEEQIKRIIEELENHGVRVR 172 (175)
T ss_dssp -GGGHHHHHHHH--T--EEEE--T-TS--------HHHHHHHHHHHHTTT-EEE
T ss_pred CHHHHHHHHHhC--CCCEEEEEcC-cc-------CHHHHHHHHHHHHhCCCEEE
Confidence 688899999886 454454 444 32 56779999999999998654
No 500
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=20.41 E-value=1.6e+02 Score=27.53 Aligned_cols=43 Identities=21% Similarity=0.414 Sum_probs=29.6
Q ss_pred CHHHHHHHHHhcCCCeEEEEEccccCCCccccCChhhHHHHHHHHHhcCcEEE
Q 012138 210 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMI 262 (470)
Q Consensus 210 d~~~Le~~l~~~~~~~~~vi~epi~n~~G~~~~~~~~l~~l~~l~~~~gillI 262 (470)
++..|.+.++++ ++++|++|+.. +....+.|.+++++.|+.++
T Consensus 194 ~l~~l~~~ik~~--~v~~if~e~~~--------~~k~~~~l~~la~~~~~~v~ 236 (264)
T cd01020 194 DIAAFQNAIKNR--QIDALIVNPQQ--------ASSATTNITGLAKRSGVPVV 236 (264)
T ss_pred HHHHHHHHHHhC--CCCEEEeCCCC--------CcHHHHHHHHHHHHcCCCEE
Confidence 345556666654 78899999933 33446777788999998764
Done!