Query 012139
Match_columns 470
No_of_seqs 135 out of 282
Neff 3.8
Searched_HMMs 29240
Date Mon Mar 25 03:32:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012139.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012139hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dnh_A Uncharacterized protein 99.9 1.3E-27 4.5E-32 229.5 16.2 214 108-466 21-238 (258)
2 2arz_A Hypothetical protein PA 99.9 1.8E-26 6.2E-31 216.8 15.6 216 110-470 3-221 (247)
3 3swj_A CHUZ, putative uncharac 99.2 2.4E-11 8.3E-16 116.8 6.8 59 405-469 3-62 (251)
4 3gas_A Heme oxygenase; FMN-bin 99.2 3.2E-11 1.1E-15 117.1 7.2 59 406-470 3-62 (259)
5 1xhn_A CREG, cellular represso 99.2 9.1E-11 3.1E-15 106.4 9.4 162 109-398 13-183 (184)
6 3gas_A Heme oxygenase; FMN-bin 98.7 6E-09 2.1E-13 101.2 3.5 71 289-397 164-239 (259)
7 3swj_A CHUZ, putative uncharac 98.6 2.1E-08 7.2E-13 96.5 4.4 74 290-397 165-239 (251)
8 3tgv_A Heme-binding protein HU 98.1 6.9E-07 2.4E-11 78.7 2.6 59 289-385 79-141 (148)
9 1vl7_A Hypothetical protein AL 96.9 0.00039 1.3E-08 60.8 2.8 65 114-185 18-83 (157)
10 2hq7_A Protein, related to gen 78.2 1.6 5.5E-05 36.4 3.5 26 364-389 115-141 (146)
11 2fhq_A Putative general stress 66.7 9.1 0.00031 31.6 5.5 21 364-385 115-135 (141)
12 3ec6_A General stress protein 57.0 34 0.0012 28.4 7.4 20 364-383 111-130 (139)
13 2asf_A Hypothetical protein RV 44.7 51 0.0017 27.3 6.5 54 290-383 80-134 (137)
14 3db0_A LIN2891 protein; putati 42.3 38 0.0013 27.5 5.2 49 131-185 20-68 (128)
15 3f7e_A Pyridoxamine 5'-phospha 37.6 82 0.0028 25.7 6.6 29 288-316 73-101 (131)
16 2iab_A Hypothetical protein; N 36.6 77 0.0026 27.1 6.5 25 364-391 119-143 (155)
17 2hti_A BH0577 protein; structu 32.4 16 0.00055 32.3 1.5 68 109-184 8-75 (185)
18 2i02_A General stress protein 28.1 80 0.0028 26.2 5.1 52 129-183 23-75 (148)
19 1vl7_A Hypothetical protein AL 26.4 31 0.0011 29.5 2.2 57 290-384 97-157 (157)
20 2ayu_A Nucleosome assembly pro 25.6 11 0.00038 39.1 -0.9 15 63-77 238-252 (417)
21 1wmh_B Partitioning defective- 22.0 87 0.003 26.0 4.0 32 153-185 52-83 (86)
22 2w56_A VC0508; unknown functio 20.6 36 0.0012 30.7 1.5 23 76-98 39-61 (147)
No 1
>3dnh_A Uncharacterized protein ATU2129; APC6114, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2, protein structure initiative; 1.94A {Agrobacterium tumefaciens}
Probab=99.95 E-value=1.3e-27 Score=229.55 Aligned_cols=214 Identities=15% Similarity=0.117 Sum_probs=160.5
Q ss_pred CcCCcCchhhcceeEEEEcCeeEEEEeeeccCccccccccCCCCeeeccCCCEEEEecCchhHhhhhccCCCceEEEEec
Q 012139 108 GEEARLTAAETSRTIIEVNSTATLMFTDFTNGGAHENIIWPDLPYVTDEHGNIYIQVKNEEDILQSLISENNFVQVIIGF 187 (470)
Q Consensus 108 ~~~~~lt~aE~aRTivEvN~ka~l~~~~~v~~e~H~~i~w~e~~Y~~D~~GdiyFqv~~d~~il~~~~~~nn~v~viiG~ 187 (470)
..++....++.||+++.-+..|+|---......||-... +|+.|+.|.+||-+.....=.+.+. .|.-|.+.|.-
T Consensus 21 ~~p~~~~~~~~ar~lL~~~~~g~LaTv~~~dG~P~~s~v----~y~~d~~g~~~~~~s~~~~h~~NL~-~dprvSl~V~~ 95 (258)
T 3dnh_A 21 SAGAPFEAVRVARDVLHTSRTAALATLDPVSGYPYTTAT----NIGIEPDGTPFFFAAGLTLHARNME-TDARISVTLAP 95 (258)
T ss_dssp -----CCHHHHHHHHHHHCCEEEEEEECTTTCCEEEEEE----ECEECTTSCEEEEEETTSHHHHHHH-HCCEEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHhCCEEEEEeccCCCCceEEEEE----EEEECCCCCEEEEEeCCcHHHHHHh-hCCCEEEEEec
Confidence 466777889999999999888887643313455666554 5889988999998877654455543 33334444321
Q ss_pred chhHHHHhhhhcCccccccccccCCCCCCCccCCCCCccCccccccccccceecccCccccccccCcccccccccccchh
Q 012139 188 DTTEMIKEMELAGLSEIDFGIDEIDDEDSDVEDEDEDEDEDEEDEDYDENWVNVLEDEDDEDEMLGDWAKLETMRSSHPM 267 (470)
Q Consensus 188 d~~~~~~e~~~~~~s~~df~~~~~~ded~d~ed~~~~~~~~~~dedy~~~~~~v~~d~~e~~~~l~dW~~~eT~~~~HP~ 267 (470)
+. .
T Consensus 96 ~~-------------------------------------------~---------------------------------- 98 (258)
T 3dnh_A 96 FG-------------------------------------------K---------------------------------- 98 (258)
T ss_dssp GG-------------------------------------------G----------------------------------
T ss_pred CC-------------------------------------------C----------------------------------
Confidence 00 0
Q ss_pred HHHHHHHHHhcCCcccccCCCCCeeEEEEEeeeccccchhhHHHHhhccccC-CCCCCccccccCCccccccccCCCCCC
Q 012139 268 YFAKKLSEVISDDPIDWMEQPPAGITIQGLLRPALIEEHSDIQRHRSSNQYH-DVDNSKNVVVGNNQEDLHVINGHRNES 346 (470)
Q Consensus 268 yFAk~l~~~~~~~~~~~md~P~~glsI~G~lrpa~~eE~s~ir~~~~~~~~~-~~y~s~~~~~~~~~e~~~~i~~~~~~~ 346 (470)
.+++ ...||+|+|.++++..+|...++++|+.+|.. ..+ .
T Consensus 99 --------------~d~~--~~~rvtl~G~a~~v~~~e~~~l~~~y~~rhP~a~~~-----------------------~ 139 (258)
T 3dnh_A 99 --------------GDAL--TLPRLTLVGRADRIGPDEVPLAIARYIARYPKAKLY-----------------------L 139 (258)
T ss_dssp --------------SCGG--GSCEEEEEEEEEECCGGGHHHHHHHHHHHCTTHHHH-----------------------T
T ss_pred --------------CChh--hCCeEEEEEEEEEcCchHHHHHHHHHHHHCcChHHc-----------------------c
Confidence 0011 13689999999999988889999999999833 223 1
Q ss_pred CCCCCCCcccccCCCCCCCeEEEEEEeeeEEEecCCCc-ccccChhhhhc--cCChhhhhhhHHHHHHHhcCChhhHHHH
Q 012139 347 EPSRNGSEESKKDDKPMNGTSFYKLEMTKIQPILAHAH-QAAVDIEDYRK--AQPDVIAHSAANIISRLKAGGEKTTQAL 423 (470)
Q Consensus 347 d~~~~g~~~~~~~~~~~~DFsFYRLe~erIrlIGGFGr-a~WVd~eDy~~--A~PD~LAasAa~IIeHMNeDHadaldAL 423 (470)
++ +||.||||++++++|+||||+ ++||+++||.+ +.||+|++.+++||+|||+|| +++
T Consensus 140 ~~---------------~df~l~rl~~~~v~~v~GFG~~a~~v~~~d~~~~~a~~d~l~~~~~~ii~hmN~dH-d~l--- 200 (258)
T 3dnh_A 140 SL---------------PDTRLYRLRTEGVQINGGPARNASNITPADLRTDLSGAEELMAAAESEATRLNAIK-GEA--- 200 (258)
T ss_dssp SS---------------TTEEEEEEEEEEEEEEC------CCCCHHHHSCCCTTCHHHHHHHHHHHHHHHTST-THH---
T ss_pred cC---------------CCeEEEEEEEeEEEEEcccCcccccCCHHHhcccCCCCchhHHHHHHHHHHHHhhH-HHH---
Confidence 22 799999999999999999999 99999999999 889999999999999999999 765
Q ss_pred HHHHHHhcCCCCCceEEEeecCCCceEEEecCCcceEEEeecC
Q 012139 424 KSLCWRTKGIQVEEEAVIGVDSIGFDLRVCAGTQIQTLRFAFN 466 (470)
Q Consensus 424 ~~ya~~~~G~~veeArMIGVDrlGfDLRV~sG~~~~tlRfpFp 466 (470)
.+||+ +.|+.++.|+|+|||++|||||+ | .+.+||+|+
T Consensus 201 ~~~~~-~~~~~~~~a~~~~vD~~G~dl~~--~--~~~~Ri~F~ 238 (258)
T 3dnh_A 201 SRLAV-LAGAKTGRWKITSIDPDGIDLAS--A--SDLARLWFA 238 (258)
T ss_dssp HHHHH-HTTCCCSSCEEEEEETTEEEEEC--S--SCEEEEECS
T ss_pred HHHHH-hCCCCCCcEEEEEEccCcCEEEE--C--CEEEEeeCC
Confidence 99999 89988899999999999999998 2 379999998
No 2
>2arz_A Hypothetical protein PA4388; hypothetical protein,structural genomics,MCSG, PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa} SCOP: b.45.1.1
Probab=99.94 E-value=1.8e-26 Score=216.78 Aligned_cols=216 Identities=15% Similarity=0.141 Sum_probs=165.2
Q ss_pred CCcCchhhcceeEEEEcCeeEEEEeee-ccCccccccccCCCCeeeccCCCEEEEecCchhHhhhhccCCCceEEEEecc
Q 012139 110 EARLTAAETSRTIIEVNSTATLMFTDF-TNGGAHENIIWPDLPYVTDEHGNIYIQVKNEEDILQSLISENNFVQVIIGFD 188 (470)
Q Consensus 110 ~~~lt~aE~aRTivEvN~ka~l~~~~~-v~~e~H~~i~w~e~~Y~~D~~GdiyFqv~~d~~il~~~~~~nn~v~viiG~d 188 (470)
+...+.++.+|++++-+..++|---+- ....||-... +|..|..|.+||-+.....-.+.+. .|.-|.+.|.
T Consensus 3 ~~~~~~~~~~r~ll~~~~~~~LaT~~~~~dG~P~~s~v----~~~~d~~g~~~f~~s~~s~k~~nl~-~nprvsl~v~-- 75 (247)
T 2arz_A 3 SMSVEAAKNARELLLKEYRAVLSTHSKKWPGFPFGSVV----PYCLDAEGRPLILISRIAQHTHNLQ-ADPRCSMLVG-- 75 (247)
T ss_dssp --CHHHHHHHHHHHHHCSEEEEEEECSSSTTCEEEEEE----ECEECTTSCEEEEEETTSHHHHHHH-HCCEEEEEEE--
T ss_pred CCChHHHHHHHHHHHhCCEEEEEEcCCCCCCcceEEEE----EEEECCCCCEEEEEeChhHHHHHHH-hCCCeEEEEe--
Confidence 345667888999988777666543221 1455776555 4888989999999998876666654 4455555441
Q ss_pred hhHHHHhhhhcCccccccccccCCCCCCCccCCCCCccCccccccccccceecccCccccccccCcccccccccccchhH
Q 012139 189 TTEMIKEMELAGLSEIDFGIDEIDDEDSDVEDEDEDEDEDEEDEDYDENWVNVLEDEDDEDEMLGDWAKLETMRSSHPMY 268 (470)
Q Consensus 189 ~~~~~~e~~~~~~s~~df~~~~~~ded~d~ed~~~~~~~~~~dedy~~~~~~v~~d~~e~~~~l~dW~~~eT~~~~HP~y 268 (470)
.+ + .+
T Consensus 76 ~~----------------------------------------~-~~---------------------------------- 80 (247)
T 2arz_A 76 ER----------------------------------------G-AE---------------------------------- 80 (247)
T ss_dssp CT----------------------------------------T-CS----------------------------------
T ss_pred cC----------------------------------------C-CC----------------------------------
Confidence 00 0 00
Q ss_pred HHHHHHHHhcCCcccccCCCCCeeEEEEEeeeccccchhhHHHHhhccccC-CCCCCccccccCCccccccccCCCCCCC
Q 012139 269 FAKKLSEVISDDPIDWMEQPPAGITIQGLLRPALIEEHSDIQRHRSSNQYH-DVDNSKNVVVGNNQEDLHVINGHRNESE 347 (470)
Q Consensus 269 FAk~l~~~~~~~~~~~md~P~~glsI~G~lrpa~~eE~s~ir~~~~~~~~~-~~y~s~~~~~~~~~e~~~~i~~~~~~~d 347 (470)
+++. -.+|+|.|.++++..+|...++.+|..++.. ..| .+
T Consensus 81 --------------~~~~--~~~v~l~G~a~~v~d~e~~~~~~~~~~~~P~~~~~-----------------------~~ 121 (247)
T 2arz_A 81 --------------DIQA--VGRLTLLAEARQLAEEEVAAAAERYYRYFPESADY-----------------------HR 121 (247)
T ss_dssp --------------STTS--SCEEEEEEEEEECCHHHHHHHHHHHHHHCGGGTTC-----------------------BT
T ss_pred --------------Chhh--CceEEEEEEEEECCcHHHHHHHHHHHHHCcChhhc-----------------------cc
Confidence 0011 3589999999999865567889999887732 222 11
Q ss_pred CCCCCCcccccCCCCCCCeEEEEEEeeeEEEecCCCcccccChhhhhccCChhhhh-hhHHHHHHHhcCChhhHHHHHHH
Q 012139 348 PSRNGSEESKKDDKPMNGTSFYKLEMTKIQPILAHAHQAAVDIEDYRKAQPDVIAH-SAANIISRLKAGGEKTTQALKSL 426 (470)
Q Consensus 348 ~~~~g~~~~~~~~~~~~DFsFYRLe~erIrlIGGFGra~WVd~eDy~~A~PD~LAa-sAa~IIeHMNeDHadaldAL~~y 426 (470)
.+||.||||++++++|++|||+++||++++|..+ |+++. .+++||+|||+||+ ++|.+|
T Consensus 122 ---------------~~~~~l~rl~~~~~~~~~gfG~~~~v~~~~~~~a--dp~~~~~~~~ii~hmN~dH~---~~l~~~ 181 (247)
T 2arz_A 122 ---------------VHDFDFWVLQPVQWRFIGGFGAIHWLAAERVPLA--NPFAGEAERGMVEHMNSDHA---AAIAHY 181 (247)
T ss_dssp ---------------TBBEEEEEEEEEEEEEECTTCCEEEEETTTSCCC--CTTTTHHHHHHHHHHHHHCH---HHHHHH
T ss_pred ---------------ccCcEEEEEEEEEEEEEcCCCceEEeChhhhccc--hhhhhhhHHHHHHHHHHHHH---HHHHHH
Confidence 2689999999999999999999999999999988 99998 99999999999999 677999
Q ss_pred HHHhcCCCCCceEEEeecCCCceEEEecCCcceEEEeecCCCCC
Q 012139 427 CWRTKGIQVEEEAVIGVDSIGFDLRVCAGTQIQTLRFAFNTRVC 470 (470)
Q Consensus 427 a~~~~G~~veeArMIGVDrlGfDLRV~sG~~~~tlRfpFp~pA~ 470 (470)
|+++.|+..+.|+|+|||++|||||+. .+.+||+|++|+.
T Consensus 182 ~~~~~~~~~~~~~~~~iD~~G~~l~~~----~~~~Ri~F~~~~~ 221 (247)
T 2arz_A 182 VELAGLPAHAAAQLAGIDTEGFHLRIG----QGLHWLPFPAACG 221 (247)
T ss_dssp HHHHCCCCSSCCEEEEECSSEEEEEET----TEEEEEECSSCCC
T ss_pred HHHhCCCCccceEEEEEccCCCEEEEC----CEEEEEeCCCcCC
Confidence 999999887889999999999999983 2689999999973
No 3
>3swj_A CHUZ, putative uncharacterized protein; heme oxygenase, bacterial iron aquisition, heme bindin; HET: HEM; 2.41A {Campylobacter jejuni}
Probab=99.17 E-value=2.4e-11 Score=116.84 Aligned_cols=59 Identities=29% Similarity=0.424 Sum_probs=50.1
Q ss_pred hHHHHHHHhcCChhhHHHHHHHHHHhcCCC-CCceEEEeecCCCceEEEecCCcceEEEeecCCCC
Q 012139 405 AANIISRLKAGGEKTTQALKSLCWRTKGIQ-VEEEAVIGVDSIGFDLRVCAGTQIQTLRFAFNTRV 469 (470)
Q Consensus 405 Aa~IIeHMNeDHadaldAL~~ya~~~~G~~-veeArMIGVDrlGfDLRV~sG~~~~tlRfpFp~pA 469 (470)
.++||+|||+||+ ++|.+||+++.|+. ++.|+|++||++||||++. +..++||+|++|+
T Consensus 3 ~~~i~~HMN~DH~---d~~~~~a~~~~~~~~~~~~~~~~iD~~g~~l~~~---~~~~~ri~F~~~~ 62 (251)
T 3swj_A 3 FESIISHMNDHHK---SNLVDLCKKFGGIEQVQDVFLKSVDFNGLDLVYN---DKENLRVEFPKKA 62 (251)
T ss_dssp THHHHHHHHHSCS---HHHHHHHHHHTCCSCCC-CEEEEEETTEEEEEC------CEEEEECSSCC
T ss_pred HHHHHHHHHHhHH---HHHHHHHHHhCCCCCCCeeEEEEEecccCEEEeC---CceEEEEeCCCCC
Confidence 3589999999999 67799999999984 7899999999999999873 2479999999985
No 4
>3gas_A Heme oxygenase; FMN-binding split barrel, oxidoreductase; HET: HEM; 1.80A {Helicobacter pylori}
Probab=99.16 E-value=3.2e-11 Score=117.06 Aligned_cols=59 Identities=31% Similarity=0.349 Sum_probs=52.4
Q ss_pred HHHHHHHhcCChhhHHHHHHHHHHhcCCC-CCceEEEeecCCCceEEEecCCcceEEEeecCCCCC
Q 012139 406 ANIISRLKAGGEKTTQALKSLCWRTKGIQ-VEEEAVIGVDSIGFDLRVCAGTQIQTLRFAFNTRVC 470 (470)
Q Consensus 406 a~IIeHMNeDHadaldAL~~ya~~~~G~~-veeArMIGVDrlGfDLRV~sG~~~~tlRfpFp~pA~ 470 (470)
++||+|||+||+ +||.+||++|.|+. ++.|+|++||++||||++ + +.+++||+|++|+.
T Consensus 3 ~~ii~HMN~DH~---dal~~y~~~~~~~~~~~~a~m~~iD~~G~~l~~--~-~~~~~ri~F~~~~~ 62 (259)
T 3gas_A 3 NRIIEHMNAHHV---EDMKGLLKKFGQVHHAENVAFKSVDSQGIVIGY--N-NNQTLRIEFNHEVK 62 (259)
T ss_dssp HHHHHHHHHHCH---HHHHHHHHHHHCCCSCCSCEEEEEETTEEEEEE--T-TTEEEEEECSSCCC
T ss_pred hHHHHHHHHhhH---HHHHHHHHHhCCCCCCCceEEEEEecCccEEEE--C-CceEEEEeCCCcCC
Confidence 589999999999 67799999999985 679999999999999998 2 24799999999873
No 5
>1xhn_A CREG, cellular repressor of E1A-stimulated genes; beta-barrel, unknown function; HET: MSE; 1.95A {Homo sapiens} SCOP: b.45.1.1
Probab=99.15 E-value=9.1e-11 Score=106.37 Aligned_cols=162 Identities=17% Similarity=0.159 Sum_probs=114.2
Q ss_pred cCCcCchhhcceeEEEEcCeeEEEEeee---ccCccccccccCCCCeee----ccCCCEEEEecCchhHhhhhccCCCce
Q 012139 109 EEARLTAAETSRTIIEVNSTATLMFTDF---TNGGAHENIIWPDLPYVT----DEHGNIYIQVKNEEDILQSLISENNFV 181 (470)
Q Consensus 109 ~~~~lt~aE~aRTivEvN~ka~l~~~~~---v~~e~H~~i~w~e~~Y~~----D~~GdiyFqv~~d~~il~~~~~~nn~v 181 (470)
-+.++++++.||+++.-+.-++|---.- +...|+-...| |+. |+-|.+||-+.....=.+.+. .|+-|
T Consensus 13 ~~~~~~~~~~ar~ll~~~~~g~LaTi~~~~~~dG~P~~s~v~----~~~~~~~d~~g~~~f~~s~~~~~~~nl~-~nprv 87 (184)
T 1xhn_A 13 LPPREDAARVARFVTHVSDWGALATISTLEAVRGRPFADVLS----LSDGPPGAGSGVPYFYLSPLQLSVSNLQ-ENPYA 87 (184)
T ss_dssp CCCTTCHHHHHHHHHHHCSEEEEEEECCCGGGTTCEEEEEEE----CBSCSTTCCCSCCEEEECTTSHHHHHHH-HCCEE
T ss_pred CCCChHHHHHHHHHHHhCCEEEEEecccCCCCCCcceEEEEE----EEeccCcCCCCCEEEEEeCccHhHHHHh-hCCCE
Confidence 4567889999999999888777644321 14556666654 565 677999999999877777764 55666
Q ss_pred EEEEecchhHHHHhhhhcCccccccccccCCCCCCCccCCCCCccCccccccccccceecccCccccccccCcccccccc
Q 012139 182 QVIIGFDTTEMIKEMELAGLSEIDFGIDEIDDEDSDVEDEDEDEDEDEEDEDYDENWVNVLEDEDDEDEMLGDWAKLETM 261 (470)
Q Consensus 182 ~viiG~d~~~~~~e~~~~~~s~~df~~~~~~ded~d~ed~~~~~~~~~~dedy~~~~~~v~~d~~e~~~~l~dW~~~eT~ 261 (470)
.+.|.-+...
T Consensus 88 Sl~v~~~~~~---------------------------------------------------------------------- 97 (184)
T 1xhn_A 88 TLTMTLAQTN---------------------------------------------------------------------- 97 (184)
T ss_dssp EEEEEGGGTT----------------------------------------------------------------------
T ss_pred EEEEecCCCc----------------------------------------------------------------------
Confidence 6666432210
Q ss_pred cccchhHHHHHHHHHhcCCcccccCCC-CCeeEEEEEeeeccccchhhHHHHhhccccCC-CCCCccccccCCccccccc
Q 012139 262 RSSHPMYFAKKLSEVISDDPIDWMEQP-PAGITIQGLLRPALIEEHSDIQRHRSSNQYHD-VDNSKNVVVGNNQEDLHVI 339 (470)
Q Consensus 262 ~~~HP~yFAk~l~~~~~~~~~~~md~P-~~glsI~G~lrpa~~eE~s~ir~~~~~~~~~~-~y~s~~~~~~~~~e~~~~i 339 (470)
|+.|+ ..+| ++ | -.||+|.|.++++..+|...++++|+.++... .+
T Consensus 98 ------~~~~~-----~~dp---~~-~~~~rvtl~G~a~~v~d~e~~~~~~~~~~~hP~~~~~----------------- 145 (184)
T 1xhn_A 98 ------FCKKH-----GFDP---QS-PLCVHIMLSGTVTKVNETEMDIAKHSLFIRHPEMKTW----------------- 145 (184)
T ss_dssp ------HHHHH-----TCCT---TS-TTSCEEEEEEEEEECCGGGHHHHHHHHHHHCGGGGGS-----------------
T ss_pred ------ccccc-----CCCC---cc-ccCceEEEEEEEEECChHHHHHHHHHHHHHCcChhHc-----------------
Confidence 00000 0011 11 1 35999999999999777788999999877322 22
Q ss_pred cCCCCCCCCCCCCCcccccCCCCCCCeEEEEEEeeeEEEecCCCcccccChhhhhccCC
Q 012139 340 NGHRNESEPSRNGSEESKKDDKPMNGTSFYKLEMTKIQPILAHAHQAAVDIEDYRKAQP 398 (470)
Q Consensus 340 ~~~~~~~d~~~~g~~~~~~~~~~~~DFsFYRLe~erIrlIGGFGra~WVd~eDy~~A~P 398 (470)
.+ .+||.||||++++++|+||||+++||+++||..|++
T Consensus 146 ------~~---------------~~~~~~~~l~i~~i~~v~gFG~~~~v~~~~~~~a~~ 183 (184)
T 1xhn_A 146 ------PS---------------SHNWFFAKLNITNIWVLDYFGGPKIVTPEEYYNVTV 183 (184)
T ss_dssp ------CG---------------GGCCEEEEEEEEEEEEECSSSSCEECCHHHHHHCC-
T ss_pred ------cc---------------CCCEEEEEEEEeEEEEEccCCceEEeCHHHHhhccC
Confidence 11 268999999999999999999999999999998876
No 6
>3gas_A Heme oxygenase; FMN-binding split barrel, oxidoreductase; HET: HEM; 1.80A {Helicobacter pylori}
Probab=98.69 E-value=6e-09 Score=101.15 Aligned_cols=71 Identities=4% Similarity=-0.133 Sum_probs=59.5
Q ss_pred CCeeEEEEEeeecccc-chhhHHHHhhccccC----CCCCCccccccCCccccccccCCCCCCCCCCCCCcccccCCCCC
Q 012139 289 PAGITIQGLLRPALIE-EHSDIQRHRSSNQYH----DVDNSKNVVVGNNQEDLHVINGHRNESEPSRNGSEESKKDDKPM 363 (470)
Q Consensus 289 ~~glsI~G~lrpa~~e-E~s~ir~~~~~~~~~----~~y~s~~~~~~~~~e~~~~i~~~~~~~d~~~~g~~~~~~~~~~~ 363 (470)
..|||++|.++++.-+ +...++.+|+.++.. ..| .+|
T Consensus 164 ~~Rlt~~g~A~~v~~~~~~~~~~~~~~~r~p~~~~~~~~-----------------------~~~--------------- 205 (259)
T 3gas_A 164 RKRLRYKTNTRFIERGAEFDKAFDSFIEKTGGAGGIKTI-----------------------RAM--------------- 205 (259)
T ss_dssp CCEEEEEEEEEEECSSHHHHHHHHHHHHHHCSTTTHHHH-----------------------HTC---------------
T ss_pred cCeEEEEEEEEECCCchHHHHHHHHHHHHcCCchhhHhc-----------------------ccC---------------
Confidence 3699999999999853 567899999998733 333 344
Q ss_pred CCeEEEEEEeeeEEEecCCCcccccChhhhhccC
Q 012139 364 NGTSFYKLEMTKIQPILAHAHQAAVDIEDYRKAQ 397 (470)
Q Consensus 364 ~DFsFYRLe~erIrlIGGFGra~WVd~eDy~~A~ 397 (470)
+||.||||+|+++|||||||+++||++++|....
T Consensus 206 ~DF~l~rl~p~~~r~v~GFG~a~~l~~~~l~~~~ 239 (259)
T 3gas_A 206 QDFHLIALDFKEGRFVKGFGQAYDILGDKIAYVG 239 (259)
T ss_dssp TTEEEEEEEEEEEEEEEETTEEEEEETTEEEESC
T ss_pred CCeEEEEEEEeEEEEEccccEEEEeCHHHHHHhh
Confidence 7999999999999999999999999999998643
No 7
>3swj_A CHUZ, putative uncharacterized protein; heme oxygenase, bacterial iron aquisition, heme bindin; HET: HEM; 2.41A {Campylobacter jejuni}
Probab=98.60 E-value=2.1e-08 Score=96.46 Aligned_cols=74 Identities=8% Similarity=-0.040 Sum_probs=58.5
Q ss_pred CeeEEEEEeeecccc-chhhHHHHhhccccCCCCCCccccccCCccccccccCCCCCCCCCCCCCcccccCCCCCCCeEE
Q 012139 290 AGITIQGLLRPALIE-EHSDIQRHRSSNQYHDVDNSKNVVVGNNQEDLHVINGHRNESEPSRNGSEESKKDDKPMNGTSF 368 (470)
Q Consensus 290 ~glsI~G~lrpa~~e-E~s~ir~~~~~~~~~~~y~s~~~~~~~~~e~~~~i~~~~~~~d~~~~g~~~~~~~~~~~~DFsF 368 (470)
.||+|+|.++++..+ |...++.+|..++....+ .... .++ +||.|
T Consensus 165 ~rltl~G~a~~v~~~~e~~~~~~~~~~k~p~a~~-~~~~------------------~~~---------------~Df~l 210 (251)
T 3swj_A 165 KRLRYRVNASFLERGERFDQIYDEFEKQTGGEGG-IKTI------------------RKM---------------LDFHL 210 (251)
T ss_dssp CEEEEEEEEEECCSSHHHHHHHHHHHHHHCSTTT-HHHH------------------HTC---------------TTEEE
T ss_pred ceEEEEEEEEEecChhHHHHHHHHHHHHCCCchh-hhhc------------------Ccc---------------cCEEE
Confidence 499999999999864 677889999888733211 0000 233 79999
Q ss_pred EEEEeeeEEEecCCCcccccChhhhhccC
Q 012139 369 YKLEMTKIQPILAHAHQAAVDIEDYRKAQ 397 (470)
Q Consensus 369 YRLe~erIrlIGGFGra~WVd~eDy~~A~ 397 (470)
|||+|+++|||+|||+++||++++|....
T Consensus 211 ~rl~p~~~r~v~GFG~a~~l~~~~l~~~~ 239 (251)
T 3swj_A 211 VKLEFKKGRFVKGFGQAYDIENGNVTHVG 239 (251)
T ss_dssp EEEEEEEEEEEEETTEEEEESSSCCEESC
T ss_pred EEEEeeEEEEECCcceeEEeCHHHHHHhh
Confidence 99999999999999999999999998755
No 8
>3tgv_A Heme-binding protein HUTZ; 2.00A {Vibrio cholerae}
Probab=98.15 E-value=6.9e-07 Score=78.70 Aligned_cols=59 Identities=8% Similarity=-0.013 Sum_probs=44.6
Q ss_pred CCeeEEEEEeeeccc--cchhhHHHHhhccc--cCCCCCCccccccCCccccccccCCCCCCCCCCCCCcccccCCCCCC
Q 012139 289 PAGITIQGLLRPALI--EEHSDIQRHRSSNQ--YHDVDNSKNVVVGNNQEDLHVINGHRNESEPSRNGSEESKKDDKPMN 364 (470)
Q Consensus 289 ~~glsI~G~lrpa~~--eE~s~ir~~~~~~~--~~~~y~s~~~~~~~~~e~~~~i~~~~~~~d~~~~g~~~~~~~~~~~~ 364 (470)
..||+|+|.++++.. ++...++++|..++ .+..| .++ +
T Consensus 79 ~~rltl~G~a~~v~~~~~~~~~~~~~~~~~~~~~a~~~-----------------------~~~---------------~ 120 (148)
T 3tgv_A 79 RKRLTFDAVASMVERDSELWCQVIAQMGERFGEIIDGL-----------------------SQL---------------Q 120 (148)
T ss_dssp CCEEEEEEEEEEECTTSHHHHHHHHHHHHHHCTHHHHH-----------------------TTC---------------T
T ss_pred ceEEEEeeeEEEcCCCcHHHHHHHHHHHhhcchhhhHh-----------------------hcc---------------C
Confidence 369999999999884 34456677777665 22333 233 7
Q ss_pred CeEEEEEEeeeEEEecCCCcc
Q 012139 365 GTSFYKLEMTKIQPILAHAHQ 385 (470)
Q Consensus 365 DFsFYRLe~erIrlIGGFGra 385 (470)
||.||||+|+++|||||||-.
T Consensus 121 DF~~~rl~p~~~r~V~GFG~~ 141 (148)
T 3tgv_A 121 DFMLFRLQPEQGLFVKGFGLE 141 (148)
T ss_dssp TEEEEEEEECSCCEEESCGGG
T ss_pred CEEEEEEEeEEEEEECccccc
Confidence 999999999999999999954
No 9
>1vl7_A Hypothetical protein ALR5027; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, oxidoreductase; 1.50A {Nostoc SP} SCOP: b.45.1.1
Probab=96.91 E-value=0.00039 Score=60.79 Aligned_cols=65 Identities=20% Similarity=0.263 Sum_probs=37.8
Q ss_pred chhhcceeEEEEcCeeEEEEeeec-cCccccccccCCCCeeeccCCCEEEEecCchhHhhhhccCCCceEEEE
Q 012139 114 TAAETSRTIIEVNSTATLMFTDFT-NGGAHENIIWPDLPYVTDEHGNIYIQVKNEEDILQSLISENNFVQVII 185 (470)
Q Consensus 114 t~aE~aRTivEvN~ka~l~~~~~v-~~e~H~~i~w~e~~Y~~D~~GdiyFqv~~d~~il~~~~~~nn~v~vii 185 (470)
..++.+|.+++-+.. .+++++- ...||-...| |+.|+.|.+||-+.....=.+.+. .|.-|.+.|
T Consensus 18 ~~~~~~~~ll~~~~~--~~LaTv~~dG~P~~~~v~----~~~~~~g~~~f~t~~~s~k~~nl~-~np~vsl~v 83 (157)
T 1vl7_A 18 KAQAEYAGFIQEFQS--AIISTISEQGIPNGSYAP----FVIDDAKNIYIYVSGLAVHTKNIE-ANPLVNVLF 83 (157)
T ss_dssp -----CHHHHTTCSE--EEEEEECTTSCEEEEEEE----EEECTTCCEEEEECTTSHHHHHHH-HCCEEEEEE
T ss_pred hHHHHHHHHHHhCCE--EEEEEECCCCCEEEEEEE----EEEcCCCCEEEEEeCccHHHHHHH-hCCcEEEEE
Confidence 445556777654444 4444443 3457766665 778887999999887766666654 444444444
No 10
>2hq7_A Protein, related to general stress protein 26(GS2 B.subtilis; NP_350077.1, structural genomics, joint center for structural genomics; 2.00A {Clostridium acetobutylicum} SCOP: b.45.1.1
Probab=78.22 E-value=1.6 Score=36.42 Aligned_cols=26 Identities=4% Similarity=-0.217 Sum_probs=22.3
Q ss_pred CCeEEEEEEeeeEEEecCCCcc-cccC
Q 012139 364 NGTSFYKLEMTKIQPILAHAHQ-AAVD 389 (470)
Q Consensus 364 ~DFsFYRLe~erIrlIGGFGra-~WVd 389 (470)
+++.+|||.|.+++|..|||++ +-++
T Consensus 115 ~~~~~~~i~p~~~~~w~~~~~~~f~~~ 141 (146)
T 2hq7_A 115 PDYTALCFTAEWGNYYRHLKNITFKID 141 (146)
T ss_dssp TTEEEEEEEEEEEEEEETTEEEEEEGG
T ss_pred CCEEEEEEEccEEEEEeCCCCeEEEcc
Confidence 5899999999999999999986 4443
No 11
>2fhq_A Putative general stress protein; alpha-beta structure, structural genomics, PSI, protein STRU initiative; HET: MSE; 1.87A {Bacteroides thetaiotaomicron} SCOP: b.45.1.1
Probab=66.68 E-value=9.1 Score=31.56 Aligned_cols=21 Identities=10% Similarity=0.082 Sum_probs=18.3
Q ss_pred CCeEEEEEEeeeEEEecCCCcc
Q 012139 364 NGTSFYKLEMTKIQPILAHAHQ 385 (470)
Q Consensus 364 ~DFsFYRLe~erIrlIGGFGra 385 (470)
+++.+|||.|.+++|..| |+.
T Consensus 115 ~~~~~~~i~p~~~~~~~~-~~~ 135 (141)
T 2fhq_A 115 PGYVLLKFTANHATYWIE-GTF 135 (141)
T ss_dssp TTEEEEEEEEEEEEEEET-TEE
T ss_pred CCEEEEEEEcCEEEEeeC-Cce
Confidence 579999999999999988 653
No 12
>3ec6_A General stress protein 26; alpha-beta structure, structural genomics of niaid; HET: FAD; 1.60A {Bacillus anthracis} SCOP: b.45.1.0
Probab=56.97 E-value=34 Score=28.41 Aligned_cols=20 Identities=15% Similarity=0.034 Sum_probs=16.3
Q ss_pred CCeEEEEEEeeeEEEecCCC
Q 012139 364 NGTSFYKLEMTKIQPILAHA 383 (470)
Q Consensus 364 ~DFsFYRLe~erIrlIGGFG 383 (470)
+++.++||++.+++|..+.|
T Consensus 111 ~~~~~i~i~p~~~~~~d~~g 130 (139)
T 3ec6_A 111 PNYVLIKINPDTIYYIDGAG 130 (139)
T ss_dssp TTEEEEEEEEEEEEEEC---
T ss_pred CCEEEEEEEeeEEEEEcCCC
Confidence 68999999999999999988
No 13
>2asf_A Hypothetical protein RV2074; H37RV, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: CIT; 1.60A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=44.65 E-value=51 Score=27.26 Aligned_cols=54 Identities=6% Similarity=0.018 Sum_probs=35.7
Q ss_pred CeeEEEEEeeeccc-cchhhHHHHhhccccCCCCCCccccccCCccccccccCCCCCCCCCCCCCcccccCCCCCCCeEE
Q 012139 290 AGITIQGLLRPALI-EEHSDIQRHRSSNQYHDVDNSKNVVVGNNQEDLHVINGHRNESEPSRNGSEESKKDDKPMNGTSF 368 (470)
Q Consensus 290 ~glsI~G~lrpa~~-eE~s~ir~~~~~~~~~~~y~s~~~~~~~~~e~~~~i~~~~~~~d~~~~g~~~~~~~~~~~~DFsF 368 (470)
.+++|.|.++.+.. ++...+.++|..+.. ..+ ..+++.+
T Consensus 80 ~~v~v~G~a~~~~d~~~~~~~~~~~~~~~~-~~~---------------------------------------~~~~~~v 119 (137)
T 2asf_A 80 RWLSLEGRAAVNSDIDAVRDAELRYAQRYR-TPR---------------------------------------PNPRRVV 119 (137)
T ss_dssp EEEEEEEEEEEECCHHHHHHHHHHHHHHSC-CCC---------------------------------------CCTTEEE
T ss_pred CEEEEEEEEEEecCHHHHHHHHHHHHHhcC-ccc---------------------------------------CCCCEEE
Confidence 67899999998763 334455566664431 001 0257999
Q ss_pred EEEEeeeEEEecCCC
Q 012139 369 YKLEMTKIQPILAHA 383 (470)
Q Consensus 369 YRLe~erIrlIGGFG 383 (470)
|||.|++++-.++-+
T Consensus 120 iri~~~~v~g~~~~~ 134 (137)
T 2asf_A 120 IEVQIERVLGSADLL 134 (137)
T ss_dssp EEEEEEEEEECTTTC
T ss_pred EEEEEEEEEEecccc
Confidence 999999998666543
No 14
>3db0_A LIN2891 protein; putative pyridoxamine 5'-phosphate oxidase, STR genomics, joint center for structural genomics, JCSG; 2.00A {Listeria innocua}
Probab=42.27 E-value=38 Score=27.49 Aligned_cols=49 Identities=16% Similarity=0.188 Sum_probs=25.9
Q ss_pred EEEeeeccCccccccccCCCCeeeccCCCEEEEecCchhHhhhhccCCCceEEEE
Q 012139 131 LMFTDFTNGGAHENIIWPDLPYVTDEHGNIYIQVKNEEDILQSLISENNFVQVII 185 (470)
Q Consensus 131 l~~~~~v~~e~H~~i~w~e~~Y~~D~~GdiyFqv~~d~~il~~~~~~nn~v~vii 185 (470)
.++.+.-...||-...| |+. +.|.|||-...+..-++.+. .|.-|.+.|
T Consensus 20 ~~LaT~~~g~P~~~pv~----~~~-~~~~l~f~t~~~s~k~~~l~-~np~v~l~v 68 (128)
T 3db0_A 20 GVLTSVQGDFPHARYMT----FLH-DGLTLYTPSGKELPKTEEVR-RNPHVCVLI 68 (128)
T ss_dssp EEEEEEETTEEEEEEEE----CEE-ETTEEEEEC----CTTCCCC-CCCEEEEEE
T ss_pred EEEEEecCCCEEEEEEE----EEe-cCCEEEEEECCCCHHHHHHH-hCCceEEEE
Confidence 34444445677777776 233 44888888776666666653 444444444
No 15
>3f7e_A Pyridoxamine 5'-phosphate oxidase-related, FMN- binding; F420 dependent reductase, unknown function; HET: MSE; 1.23A {Mycobacterium smegmatis}
Probab=37.58 E-value=82 Score=25.71 Aligned_cols=29 Identities=10% Similarity=0.196 Sum_probs=19.6
Q ss_pred CCCeeEEEEEeeeccccchhhHHHHhhcc
Q 012139 288 PPAGITIQGLLRPALIEEHSDIQRHRSSN 316 (470)
Q Consensus 288 P~~glsI~G~lrpa~~eE~s~ir~~~~~~ 316 (470)
|-.+|+|.|.++.+..++...+.+.+..+
T Consensus 73 ~~~~v~v~G~a~~v~~~~~~~~~~~l~~k 101 (131)
T 3f7e_A 73 PYRYLEVRGLVEDIVPDPTGAFYLKLNDR 101 (131)
T ss_dssp TTCEEEEEEEEEEEEECTTCHHHHHHHHH
T ss_pred CeeEEEEEEEEEEeccCccHHHHHHHHHH
Confidence 45799999999988755444444444444
No 16
>2iab_A Hypothetical protein; NP_828636.1, structural genomics, JOIN for structural genomics, JCSG; 2.00A {Streptomyces avermitilis}
Probab=36.64 E-value=77 Score=27.15 Aligned_cols=25 Identities=4% Similarity=0.171 Sum_probs=18.7
Q ss_pred CCeEEEEEEeeeEEEecCCCcccccChh
Q 012139 364 NGTSFYKLEMTKIQPILAHAHQAAVDIE 391 (470)
Q Consensus 364 ~DFsFYRLe~erIrlIGGFGra~WVd~e 391 (470)
+++.+|||.|+++.+-++ ..+|...
T Consensus 119 ~~~~~~ri~p~~v~~w~~---~~~l~~r 143 (155)
T 2iab_A 119 TSYLYFRISPRRVQAWRE---ANELSGR 143 (155)
T ss_dssp SCEEEEEEEEEEEEEESS---GGGSTTC
T ss_pred CCEEEEEEEEEEEEEecC---CCCcCcc
Confidence 579999999999996665 4455443
No 17
>2hti_A BH0577 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, FMN-binding protein; HET: FAD; 2.50A {Bacillus halodurans} SCOP: b.45.1.1
Probab=32.37 E-value=16 Score=32.30 Aligned_cols=68 Identities=13% Similarity=0.100 Sum_probs=48.4
Q ss_pred cCCcCchhhcceeEEEEcCeeEEEEeeeccCccccccccCCCCeeeccCCCEEEEecCchhHhhhhccCCCceEEE
Q 012139 109 EEARLTAAETSRTIIEVNSTATLMFTDFTNGGAHENIIWPDLPYVTDEHGNIYIQVKNEEDILQSLISENNFVQVI 184 (470)
Q Consensus 109 ~~~~lt~aE~aRTivEvN~ka~l~~~~~v~~e~H~~i~w~e~~Y~~D~~GdiyFqv~~d~~il~~~~~~nn~v~vi 184 (470)
++-.||+.|.++.+++-+.-|+|.+.+ .+.||=.-. .|+.|+ |.|||-......-++.+. .|..|.+.
T Consensus 8 ~~~~~~d~e~i~~~L~~~~~~~Lat~~--~g~P~~~Pv----~f~~~~-~~ly~hta~~~~k~~~l~-~np~V~~~ 75 (185)
T 2hti_A 8 TKRECKDEKKITEFLNKARTGFLGLST--NDQPYVIPL----NFVWHN-HAIYFHGASEGRKIKMIE-ANPEVCFT 75 (185)
T ss_dssp ---CCCCHHHHHHHHHHCCCEEEEEEE--TTEEEEEEE----CCEEET-TEEEEEEESSSHHHHHHH-HCCEEEEE
T ss_pred ccccCCCHHHHHHHHhcCCEEEEEEee--CCEEEEEEE----EEEEEC-CEEEEEeCCcCHHHHHhh-cCCeEEEE
Confidence 455689999889999999999988766 456766544 567775 899999988777777764 44444433
No 18
>2i02_A General stress protein of COG3871; pyridoxamine 5'-phosphate like family protein, structural genomics, joint center for structural genomics; HET: MSE FMN P33; 1.80A {Nostoc punctiforme} SCOP: b.45.1.1
Probab=28.12 E-value=80 Score=26.17 Aligned_cols=52 Identities=13% Similarity=0.149 Sum_probs=30.3
Q ss_pred eEEEEeeec-cCccccccccCCCCeeeccCCCEEEEecCchhHhhhhccCCCceEE
Q 012139 129 ATLMFTDFT-NGGAHENIIWPDLPYVTDEHGNIYIQVKNEEDILQSLISENNFVQV 183 (470)
Q Consensus 129 a~l~~~~~v-~~e~H~~i~w~e~~Y~~D~~GdiyFqv~~d~~il~~~~~~nn~v~v 183 (470)
-+.++.+.- ...||=...|.- +.+|+.|.|||-......-.+.|. +|..|.+
T Consensus 23 ~~~~LaT~~~dG~P~~~pv~~~--~~~~~~~~l~f~t~~~s~k~~~l~-~np~v~l 75 (148)
T 2i02_A 23 DYGMFTTVDDDGSLHSYPMSKS--GDINSEATLWFFTYAGSHKVTEIE-HHEQVNV 75 (148)
T ss_dssp CEEEEEEECTTSCEEEEEEECB--CC---CCEEEEEEETTSHHHHHHH-HCCEEEE
T ss_pred CEEEEEEEcCCCCEEEEEeEee--EEEcCCCeEEEEEcCCCHHHHHHH-hCCcEEE
Confidence 344555544 455887777741 234556889998888777777764 4444443
No 19
>1vl7_A Hypothetical protein ALR5027; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, oxidoreductase; 1.50A {Nostoc SP} SCOP: b.45.1.1
Probab=26.43 E-value=31 Score=29.53 Aligned_cols=57 Identities=5% Similarity=-0.018 Sum_probs=42.8
Q ss_pred CeeEEEEEeeecccc--chhhHHHHhhccccCC--CCCCccccccCCccccccccCCCCCCCCCCCCCcccccCCCCCCC
Q 012139 290 AGITIQGLLRPALIE--EHSDIQRHRSSNQYHD--VDNSKNVVVGNNQEDLHVINGHRNESEPSRNGSEESKKDDKPMNG 365 (470)
Q Consensus 290 ~glsI~G~lrpa~~e--E~s~ir~~~~~~~~~~--~y~s~~~~~~~~~e~~~~i~~~~~~~d~~~~g~~~~~~~~~~~~D 365 (470)
.+|+|.|.++.+..+ +...++.+|...+... .+ .+ .+|
T Consensus 97 ~~v~i~G~a~~v~~~~~~~~~~~~~~~~~~p~~~~~~-----------------------~~---------------~~~ 138 (157)
T 1vl7_A 97 RRLSFDCTATLIERESQKWNQVVDQFQERFGQIIEVL-----------------------RG---------------LAD 138 (157)
T ss_dssp CEEEEEEEEEEECTTSHHHHHHHHHHHHHHTHHHHHH-----------------------HH---------------HSC
T ss_pred ceEEEEEEEEEcCCCcHHHHHHHHHHHHHCchHHHHh-----------------------hc---------------cCC
Confidence 689999999999854 3356777777765221 11 01 158
Q ss_pred eEEEEEEeeeEEEecCCCc
Q 012139 366 TSFYKLEMTKIQPILAHAH 384 (470)
Q Consensus 366 FsFYRLe~erIrlIGGFGr 384 (470)
|.+|||++++++|++|||+
T Consensus 139 ~~l~~l~~~~~~~~~GFG~ 157 (157)
T 1vl7_A 139 FRIFQLTPKEGRFVIGFGA 157 (157)
T ss_dssp CEEEEEEEEEEEEECSSCC
T ss_pred EEEEEEEEeEEEEEcCcCC
Confidence 9999999999999999996
No 20
>2ayu_A Nucleosome assembly protein; histone chaperone; 3.00A {Saccharomyces cerevisiae} SCOP: d.305.1.1 PDB: 2z2r_A
Probab=25.61 E-value=11 Score=39.12 Aligned_cols=15 Identities=27% Similarity=0.344 Sum_probs=11.2
Q ss_pred cCCccccccceeeee
Q 012139 63 NGNPCVTRSNVTKKR 77 (470)
Q Consensus 63 ~~~~~~~~~~~~k~r 77 (470)
..|||.+-+.|+|.=
T Consensus 238 ~~NpYF~N~vLtKtY 252 (417)
T 2ayu_A 238 SANPFFTNDILCKTY 252 (417)
T ss_dssp TTCSSBCCSEEEEEE
T ss_pred CCCccccCCeEEEEE
Confidence 468888888787763
No 21
>1wmh_B Partitioning defective-6 homolog alpha; kinase, PB1 domain, OPCA motif, APKC, cell polarity, transferase/cell cycle complex; 1.50A {Homo sapiens} SCOP: d.15.2.2
Probab=21.97 E-value=87 Score=26.01 Aligned_cols=32 Identities=22% Similarity=0.536 Sum_probs=26.1
Q ss_pred eeccCCCEEEEecCchhHhhhhccCCCceEEEE
Q 012139 153 VTDEHGNIYIQVKNEEDILQSLISENNFVQVII 185 (470)
Q Consensus 153 ~~D~~GdiyFqv~~d~~il~~~~~~nn~v~vii 185 (470)
-+|++||+ ..++||+|+-.-+..++-...++|
T Consensus 52 Y~D~dGDL-lpInnDdnl~~Al~~a~plLRl~I 83 (86)
T 1wmh_B 52 YTDAHGDL-LPLTNDDSLHRALASGPPPLRLLV 83 (86)
T ss_dssp EECTTSCE-EECCSHHHHHHHTTSSSSCEEEEE
T ss_pred EECCCCCE-eeecCHHHHHHHHHhCCCcEEEEE
Confidence 46999996 799999999999987755566665
No 22
>2w56_A VC0508; unknown function; 1.90A {Vibrio cholerae} PDB: 2w56_B
Probab=20.59 E-value=36 Score=30.74 Aligned_cols=23 Identities=17% Similarity=0.348 Sum_probs=19.0
Q ss_pred eeeeeccCCCCCCCCCCCCCCch
Q 012139 76 KRIQASASDPVKKNERTSYHPFE 98 (470)
Q Consensus 76 ~r~~a~~~dp~~~~~~~~YHP~E 98 (470)
+||.--..||+-+..++||||-|
T Consensus 39 ~~ltlNFRD~~YSae~GGfHPVE 61 (147)
T 2w56_A 39 RYLVFNFRDKSYSADEGGFHPVE 61 (147)
T ss_dssp CEEEEEEECTTCBTTTBCSCCEE
T ss_pred cEEEEEcCCCCcCcccCCcCCEE
Confidence 46666678998888999999986
Done!