BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012140
(470 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5NYD9|Y3800_AROAE UPF0061 protein AZOSEA38000 OS=Aromatoleum aromaticum (strain EbN1)
GN=AZOSEA38000 PE=3 SV=1
Length = 523
Score = 387 bits (994), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/354 (55%), Positives = 236/354 (66%), Gaps = 27/354 (7%)
Query: 102 LEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELD 161
+++L D+ FV ELPGDP R+V ACY++V P+ V P L+AWS VA L D
Sbjct: 1 MKNLVLDNRFVHELPGDPNPSPDVRQVHGACYSRVMPTP-VSAPHLIAWSPEVAALLGFD 59
Query: 162 PKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSE-- 219
+ P+F F+G + G PYA CYGGHQFG WAGQLGDGRAITLGE + + +
Sbjct: 60 ESDVRSPEFAAVFAGNALMPGMEPYAACYGGHQFGNWAGQLGDGRAITLGEAVTTRGDGH 119
Query: 220 --RWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVT 277
RWELQLKGAG TPYSR ADG AVLRSSIREFLCSEAMH LG+PTTRALCLV TG+ V
Sbjct: 120 TGRWELQLKGAGPTPYSRHADGRAVLRSSIREFLCSEAMHHLGVPTTRALCLVGTGEKVV 179
Query: 278 RDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIE 337
RDMFYDG PK EPGA+VCRVA SF+RFG+++I SRG E L + L D+ I F +
Sbjct: 180 RDMFYDGRPKAEPGAVVCRVAPSFIRFGNFEIFTSRGDEAL--LTRLVDFTIARDFPEL- 236
Query: 338 NMNKSESLSFSTGDEDHSVVDLTSNKYAAWAVEVAERTASLVAQWQGVGFTHGVLNTDNM 397
G E + + A W +V ERTA ++AQW VGF HGV+NTDNM
Sbjct: 237 ------------GGE-------PATRRAEWFCKVCERTARMIAQWMRVGFVHGVMNTDNM 277
Query: 398 SILGLTIDYGPFGFLDAFDPSFTPNTTDLPGRRYCFANQPDIGLWNIAQFSTTL 451
SILGLTIDYGP+G++D FDP +TPNTTD G+RY F NQP I WN+ Q + L
Sbjct: 278 SILGLTIDYGPYGWIDNFDPGWTPNTTDAGGKRYRFGNQPHIAHWNLLQLANAL 331
>sp|A1K5T6|Y1574_AZOSB UPF0061 protein azo1574 OS=Azoarcus sp. (strain BH72) GN=azo1574
PE=3 SV=1
Length = 519
Score = 387 bits (993), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/350 (57%), Positives = 236/350 (67%), Gaps = 23/350 (6%)
Query: 102 LEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELD 161
+ L +D+ FVRELP DP T R+V A Y++V+P+ V P LVA S VA L D
Sbjct: 1 MRPLVFDNRFVRELPADPETGPHTRQVAGASYSRVNPTP-VAAPHLVAHSAEVAALLGWD 59
Query: 162 PKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERW 221
+ P+F F G L G PYA CYGGHQFG WAGQLGDGRAITLGE+LN + RW
Sbjct: 60 ESDIASPEFAEVFGGNRLLDGMEPYAACYGGHQFGNWAGQLGDGRAITLGEVLNGQGGRW 119
Query: 222 ELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMF 281
ELQLKGAG TPYSR ADG AVLRSSIREFLCSEAMH LG+PTTRAL LV TG+ V RDMF
Sbjct: 120 ELQLKGAGPTPYSRRADGRAVLRSSIREFLCSEAMHHLGVPTTRALSLVGTGEKVVRDMF 179
Query: 282 YDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNK 341
YDGNP+ EPGAIVCRVA SF+RFG++++ A+RG DLD++ L D+ I F IE +
Sbjct: 180 YDGNPQAEPGAIVCRVAPSFIRFGNFELLAARG--DLDLLNRLIDFTIARDFPGIEGSAR 237
Query: 342 SESLSFSTGDEDHSVVDLTSNKYAAWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILG 401
+K A W V RTA++VA W VGF HGV+NTDNMSILG
Sbjct: 238 --------------------DKRARWFETVCARTATMVAHWMRVGFVHGVMNTDNMSILG 277
Query: 402 LTIDYGPFGFLDAFDPSFTPNTTDLPGRRYCFANQPDIGLWNIAQFSTTL 451
LTIDYGP+G++D FDP +TPNTTD GRRY F +QP I WN+ Q + L
Sbjct: 278 LTIDYGPYGWVDNFDPGWTPNTTDAGGRRYRFGHQPRIANWNLLQLANAL 327
>sp|Q2Y8V8|Y1510_NITMU UPF0061 protein Nmul_A1510 OS=Nitrosospira multiformis (strain ATCC
25196 / NCIMB 11849) GN=Nmul_A1510 PE=3 SV=1
Length = 565
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/369 (53%), Positives = 251/369 (68%), Gaps = 33/369 (8%)
Query: 99 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSL 158
L L D +D+ FVR+LPGDP T ++PR+V +A YT+VSP+ V +P+L+AW++ V + L
Sbjct: 15 LPDLFDARFDNRFVRQLPGDPETRNVPRQVRNAGYTQVSPTP-VRSPRLLAWADEVGEML 73
Query: 159 ELDPKEFERPDFPL-----FFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEI 213
+ RP P+ +G L PYA YGGHQFG WAGQLGDGRAITLGE+
Sbjct: 74 GI-----ARPASPVSPAVEVLAGNRILPSMQPYAARYGGHQFGHWAGQLGDGRAITLGEL 128
Query: 214 LNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTG 273
++ +R+ELQLKGAGKTPYSR ADG AVLRSS+REFLCSEAMH LG+PTTRAL LV TG
Sbjct: 129 ISPNDKRYELQLKGAGKTPYSRTADGRAVLRSSVREFLCSEAMHSLGVPTTRALSLVATG 188
Query: 274 KFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHF 333
+ V RDMFYDG+P EPGAIVCRV+ SFLRFG+++I A+ Q++ +++R LAD+ I HF
Sbjct: 189 EAVIRDMFYDGHPGAEPGAIVCRVSPSFLRFGNFEILAA--QKEPELLRQLADFVIGEHF 246
Query: 334 RHIENMNKSESLSFSTGDEDHSVVDLTSNKYAAWAVEVAERTASLVAQWQGVGFTHGVLN 393
+ + ++ + YA W EV RT LVA W VGF HGV+N
Sbjct: 247 PELASSHRPPEV------------------YAKWFEEVCRRTGILVAHWMRVGFVHGVMN 288
Query: 394 TDNMSILGLTIDYGPFGFLDAFDPSFTPNTTDLPGRRYCFANQPDIGLWNIAQFSTTLAA 453
TDNMSILGLTIDYGP+G+L+ FD +TPNTTD GRRYC+ NQP I WN+ + + L
Sbjct: 289 TDNMSILGLTIDYGPYGWLEGFDLHWTPNTTDAQGRRYCYGNQPKIAQWNLTRLAGAL-- 346
Query: 454 AKLIDDKEA 462
LI+D A
Sbjct: 347 TPLIEDDAA 355
>sp|Q1H0D2|Y1788_METFK UPF0061 protein Mfla_1788 OS=Methylobacillus flagellatus (strain KT
/ ATCC 51484 / DSM 6875) GN=Mfla_1788 PE=3 SV=1
Length = 518
Score = 377 bits (969), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/351 (54%), Positives = 241/351 (68%), Gaps = 22/351 (6%)
Query: 105 LNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKE 164
L +D+ F+RELPGDP T + R+V AC+++V P++ V +P+L+A+S + ++LEL +E
Sbjct: 2 LTFDNRFLRELPGDPETSNQLRQVYGACWSRVMPTS-VSSPKLLAYSHEMLEALELSEEE 60
Query: 165 FERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQ 224
P + +G + G PYA CYGGHQFG WAGQLGDGRAI+LGE++N + +RWELQ
Sbjct: 61 IRSPAWVDALAGNGLMPGMEPYAACYGGHQFGHWAGQLGDGRAISLGEVVNRQGQRWELQ 120
Query: 225 LKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDG 284
LKGAG TPYSR ADG AVLRSS+REFLCSEAMH LGIPTTRAL LV TG V RDMFYDG
Sbjct: 121 LKGAGVTPYSRMADGRAVLRSSVREFLCSEAMHHLGIPTTRALSLVQTGDVVIRDMFYDG 180
Query: 285 NPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSES 344
+P+ E GAIVCRV+ SF+RFG+++I A R +D ++ L D+ I F + N + E
Sbjct: 181 HPQAEKGAIVCRVSPSFIRFGNFEIFAMR--DDKQTLQKLVDFTIDRDFPELRNYPEEER 238
Query: 345 LSFSTGDEDHSVVDLTSNKYAAWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTI 404
L A W + RTA L+AQW VGF HGV+NTDNMSILGLTI
Sbjct: 239 L-------------------AEWFAIICVRTARLIAQWMRVGFVHGVMNTDNMSILGLTI 279
Query: 405 DYGPFGFLDAFDPSFTPNTTDLPGRRYCFANQPDIGLWNIAQFSTTLAAAK 455
DYGP+G++D FDP +TPNTTD GRRYCF QPDI WN+ + + L K
Sbjct: 280 DYGPYGWVDNFDPGWTPNTTDAAGRRYCFGRQPDIARWNLERLAQALYTLK 330
>sp|C1AED7|Y3822_GEMAT UPF0061 protein GAU_3822 OS=Gemmatimonas aurantiaca (strain T-27 /
DSM 14586 / JCM 11422 / NBRC 100505) GN=GAU_3822 PE=3
SV=1
Length = 522
Score = 375 bits (964), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/351 (54%), Positives = 235/351 (66%), Gaps = 23/351 (6%)
Query: 102 LEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELD 161
++ L +D+ FV ELPGDP + R+VL A ++ V P+ V PQL+A + VA L
Sbjct: 1 MQTLRFDNRFVDELPGDPDPRNQRRQVLGAAWSAVQPT-PVTAPQLLAVAPDVAAMLGFS 59
Query: 162 PKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERW 221
P++ P+F F G L G P+A CYGGHQFG WAGQLGDGRAI+LGE++ +RW
Sbjct: 60 PEQTASPEFAAVFGGNALLEGMRPWAACYGGHQFGQWAGQLGDGRAISLGELVTTAGDRW 119
Query: 222 ELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMF 281
ELQLKGAG TPYSR ADG AVLRSSIREFLCSEAMH LG+PTTRAL LVTTG V RD+
Sbjct: 120 ELQLKGAGPTPYSRTADGRAVLRSSIREFLCSEAMHHLGVPTTRALSLVTTGDPVVRDVL 179
Query: 282 YDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNK 341
Y+GNP EPGA+VCRVA SF+RFG+++I +R DL + L D+ I F HI+
Sbjct: 180 YNGNPAPEPGAVVCRVAPSFVRFGNFEIFTAR--HDLTTLAQLVDFTIARDFPHID---- 233
Query: 342 SESLSFSTGDEDHSVVDLTSNKYAAWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILG 401
GD D + AAW EV ERTA L+ W VGF HGV+NTDNMSILG
Sbjct: 234 --------GDVD--------ARRAAWFREVCERTAHLMVHWMRVGFVHGVMNTDNMSILG 277
Query: 402 LTIDYGPFGFLDAFDPSFTPNTTDLPGRRYCFANQPDIGLWNIAQFSTTLA 452
LTIDYGP+G+LD FDP +TPNTTD GRRY +A QP + WN+ + + +A
Sbjct: 278 LTIDYGPYGWLDNFDPQWTPNTTDAQGRRYRYAQQPAVAQWNLMRLADAIA 328
>sp|C4LAV8|Y683_TOLAT UPF0061 protein Tola_0683 OS=Tolumonas auensis (strain DSM 9187 /
TA4) GN=Tola_0683 PE=3 SV=1
Length = 519
Score = 361 bits (926), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 187/347 (53%), Positives = 231/347 (66%), Gaps = 23/347 (6%)
Query: 105 LNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKE 164
L++D+ F+RELPGDP T + PR+V A ++ V+P A V PQL+A S VA L + E
Sbjct: 4 LHFDNRFIRELPGDPLTLNQPRQVHAAFWSAVTP-APVPQPQLIASSAEVAALLGISLAE 62
Query: 165 FERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQ 224
++P + SG L G P+A CYGGHQFG WAGQLGDGRAI+LGE+++ RWELQ
Sbjct: 63 LQQPAWVAALSGNGLLDGMSPFATCYGGHQFGNWAGQLGDGRAISLGELIH-NDLRWELQ 121
Query: 225 LKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDG 284
LKGAG TPYSR DG AVLRSSIREFLCSEAM LG+PTTRAL LV TG+ + RDMFYDG
Sbjct: 122 LKGAGVTPYSRRGDGKAVLRSSIREFLCSEAMFHLGVPTTRALSLVLTGEQIWRDMFYDG 181
Query: 285 NPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSES 344
NP++EPGAIVCRVA SF+RFG +Q+ A RG+ DL + L D+ I F H+
Sbjct: 182 NPQQEPGAIVCRVAPSFIRFGHFQLPAMRGESDL--LNQLIDFTIDRDFPHLS------- 232
Query: 345 LSFSTGDEDHSVVDLTSNKYAAWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTI 404
+ + W EV TA L+ +W VGF HGV+NTDNMSILGLTI
Sbjct: 233 ------------AQPATVRRGVWFSEVCITTAKLMVEWTRVGFVHGVMNTDNMSILGLTI 280
Query: 405 DYGPFGFLDAFDPSFTPNTTDLPGRRYCFANQPDIGLWNIAQFSTTL 451
DYGP+G++D FD ++TPNTTD G RYCF QP I WN+ + + L
Sbjct: 281 DYGPYGWVDNFDLNWTPNTTDAEGLRYCFGRQPAIARWNLERLAEAL 327
>sp|Q7UKT5|Y9953_RHOBA UPF0061 protein RB9953 OS=Rhodopirellula baltica (strain SH1)
GN=RB9953 PE=3 SV=1
Length = 540
Score = 359 bits (922), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 182/349 (52%), Positives = 231/349 (66%), Gaps = 18/349 (5%)
Query: 104 DLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPK 163
DL +D+ F R+LP D + R+V A +++V P+ V P+ VA S+ VA+ + LDPK
Sbjct: 4 DLTFDNRFTRDLPADTEPRNFTRQVHQAGFSRVKPTP-VSAPKWVAGSKEVAELIGLDPK 62
Query: 164 EFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWEL 223
+ +G G P+A CYGGHQFG WAGQLGDGRAI LGE++ + W L
Sbjct: 63 WLGSAELTEVLAGNALADGMDPFAMCYGGHQFGNWAGQLGDGRAINLGEVVTADEKHWTL 122
Query: 224 QLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYD 283
QLKGAG TPYSR ADGLAVLRSS+REFLCSEAMH LG+PTTRAL LV TG+ V RDMFYD
Sbjct: 123 QLKGAGLTPYSRTADGLAVLRSSVREFLCSEAMHHLGVPTTRALSLVLTGEKVLRDMFYD 182
Query: 284 GNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSE 343
G+P+ E GAIVCRVA SF+RFG+++I ASR ED + ++TL ++ IR F H+ + +E
Sbjct: 183 GHPEHELGAIVCRVAPSFIRFGNFEIFASR--EDTETLQTLVEHTIRSEFSHLLSEPDAE 240
Query: 344 SLSFSTGDEDHSVVDLTSNKYAAWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLT 403
+ + AA EV TA +V W VGF HGV+NTDNMSILGLT
Sbjct: 241 ---------------IGPDVIAAMFEEVCRTTAEMVVHWMRVGFVHGVMNTDNMSILGLT 285
Query: 404 IDYGPFGFLDAFDPSFTPNTTDLPGRRYCFANQPDIGLWNIAQFSTTLA 452
IDYGP+G+L+ +DP +TPNTTD GRRY +A+QP I WN+ + L
Sbjct: 286 IDYGPYGWLEDYDPDWTPNTTDAQGRRYRYAHQPQIAQWNLVALANALV 334
>sp|B0RS12|Y1894_XANCB UPF0061 protein xcc-b100_1894 OS=Xanthomonas campestris pv.
campestris (strain B100) GN=xcc-b100_1894 PE=3 SV=1
Length = 518
Score = 357 bits (917), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 182/348 (52%), Positives = 229/348 (65%), Gaps = 24/348 (6%)
Query: 105 LNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKE 164
L +D+ +LPGDP REVL A ++ V P+ V P L+A+S VA L L ++
Sbjct: 4 LQFDNRLRAQLPGDPEQGPRRREVL-AAWSAVRPT-PVAAPTLLAYSADVAQRLGLRAED 61
Query: 165 FERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQ 224
P F F G G P+A YGGHQFG WAGQLGDGRAI+LGE + + R+ELQ
Sbjct: 62 LASPQFAEVFGGNALYPGMQPWAVNYGGHQFGHWAGQLGDGRAISLGEAIGVDGGRYELQ 121
Query: 225 LKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDG 284
LKGAG TPYSR ADG AVLRSSIREFLCSEAMH+LG+PTTRAL LV TG V RDMFYDG
Sbjct: 122 LKGAGPTPYSRGADGRAVLRSSIREFLCSEAMHYLGVPTTRALSLVGTGDAVVRDMFYDG 181
Query: 285 NPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSES 344
+P+ EPGAIVCRVA SF+RFG++++ A+RG D+D++R D+ + F + +
Sbjct: 182 HPRREPGAIVCRVAPSFIRFGNFELPAARG--DVDLLRQWVDFTLARDFPDLPGSGE--- 236
Query: 345 LSFSTGDEDHSVVDLTSNKYAAWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTI 404
++ AAW +V ERTA +VA W VGF HGV+NTDNMSILGLTI
Sbjct: 237 -----------------DRIAAWFGQVCERTAVMVAHWMRVGFVHGVMNTDNMSILGLTI 279
Query: 405 DYGPFGFLDAFDPSFTPNTTDLPGRRYCFANQPDIGLWNIAQFSTTLA 452
DYGP+G++D +DP +TPNTTD GRRY F QP + WN+ + + L+
Sbjct: 280 DYGPYGWVDDYDPDWTPNTTDAQGRRYRFGTQPQVAYWNLGRLAQALS 327
>sp|Q8P8F8|Y2284_XANCP UPF0061 protein XCC2284 OS=Xanthomonas campestris pv. campestris
(strain ATCC 33913 / NCPPB 528 / LMG 568) GN=XCC2284
PE=3 SV=1
Length = 518
Score = 357 bits (916), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 182/348 (52%), Positives = 229/348 (65%), Gaps = 24/348 (6%)
Query: 105 LNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKE 164
L +D+ ELPGDP REVL A ++ V P+ V P L+A+S VA L L ++
Sbjct: 4 LQFDNRLRAELPGDPEEGPRRREVL-AAWSAVQPT-PVAAPTLLAYSADVAQRLGLRAED 61
Query: 165 FERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQ 224
P F F G G P+A YGGHQFG WAGQLGDGRAI+LGE + + R+ELQ
Sbjct: 62 LASPRFAEVFGGNALYPGMQPWAVNYGGHQFGHWAGQLGDGRAISLGEAIGVDGGRYELQ 121
Query: 225 LKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDG 284
LKGAG TPYSR ADG AVLRSSIREFLCSEAMH+LG+PTTRAL LV TG V RDMFYDG
Sbjct: 122 LKGAGPTPYSRGADGRAVLRSSIREFLCSEAMHYLGVPTTRALSLVGTGDAVVRDMFYDG 181
Query: 285 NPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSES 344
+P+ EPGAIVCRVA SF+RFG++++ A+RG D+D++R D+ + F + +
Sbjct: 182 HPRREPGAIVCRVAPSFIRFGNFELPAARG--DVDLLRQWVDFTLARDFPDLPGSGE--- 236
Query: 345 LSFSTGDEDHSVVDLTSNKYAAWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTI 404
++ A+W +V ERTA +VA W VGF HGV+NTDNMSILGLTI
Sbjct: 237 -----------------DRIASWLGQVCERTAVMVAHWMRVGFVHGVMNTDNMSILGLTI 279
Query: 405 DYGPFGFLDAFDPSFTPNTTDLPGRRYCFANQPDIGLWNIAQFSTTLA 452
DYGP+G++D +DP +TPNTTD GRRY F QP + WN+ + + L+
Sbjct: 280 DYGPYGWVDDYDPDWTPNTTDAQGRRYRFGTQPQVAYWNLGRLAQALS 327
>sp|Q4UVM9|Y1831_XANC8 UPF0061 protein XC_1831 OS=Xanthomonas campestris pv. campestris
(strain 8004) GN=XC_1831 PE=3 SV=1
Length = 518
Score = 357 bits (916), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 182/348 (52%), Positives = 229/348 (65%), Gaps = 24/348 (6%)
Query: 105 LNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKE 164
L +D+ ELPGDP REVL A ++ V P+ V P L+A+S VA L L ++
Sbjct: 4 LQFDNRLRAELPGDPEEGPRRREVL-AAWSAVQPT-PVAAPTLLAYSADVAQRLGLRAED 61
Query: 165 FERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQ 224
P F F G G P+A YGGHQFG WAGQLGDGRAI+LGE + + R+ELQ
Sbjct: 62 LASPRFAEVFGGNALYPGMQPWAVNYGGHQFGHWAGQLGDGRAISLGEAIGVDGGRYELQ 121
Query: 225 LKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDG 284
LKGAG TPYSR ADG AVLRSSIREFLCSEAMH+LG+PTTRAL LV TG V RDMFYDG
Sbjct: 122 LKGAGPTPYSRGADGRAVLRSSIREFLCSEAMHYLGVPTTRALSLVGTGDAVVRDMFYDG 181
Query: 285 NPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSES 344
+P+ EPGAIVCRVA SF+RFG++++ A+RG D+D++R D+ + F + +
Sbjct: 182 HPRREPGAIVCRVAPSFIRFGNFELPAARG--DVDLLRQWVDFTLARDFPDLPGSGE--- 236
Query: 345 LSFSTGDEDHSVVDLTSNKYAAWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTI 404
++ A+W +V ERTA +VA W VGF HGV+NTDNMSILGLTI
Sbjct: 237 -----------------DRIASWLGQVCERTAVMVAHWMRVGFVHGVMNTDNMSILGLTI 279
Query: 405 DYGPFGFLDAFDPSFTPNTTDLPGRRYCFANQPDIGLWNIAQFSTTLA 452
DYGP+G++D +DP +TPNTTD GRRY F QP + WN+ + + L+
Sbjct: 280 DYGPYGWVDDYDPDWTPNTTDAQGRRYRFGTQPQVAYWNLGRLAQALS 327
>sp|Q8PJY5|Y2392_XANAC UPF0061 protein XAC2392 OS=Xanthomonas axonopodis pv. citri (strain
306) GN=XAC2392 PE=3 SV=1
Length = 518
Score = 349 bits (896), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 181/348 (52%), Positives = 223/348 (64%), Gaps = 24/348 (6%)
Query: 105 LNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKE 164
L +D+ ++LPGDP S REV ++ V P+ V P L+A S +A L LD E
Sbjct: 4 LRFDNRLRQQLPGDPEEGSRRREV-SVAWSAVLPT-PVAAPSLIAHSAEMAQVLGLDAAE 61
Query: 165 FERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQ 224
F F G G P+A YGGHQFG WAGQLGDGRAI+LGE + R+ELQ
Sbjct: 62 IASAQFAQVFGGNALYPGMQPWAVNYGGHQFGHWAGQLGDGRAISLGEAIGTDGGRYELQ 121
Query: 225 LKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDG 284
LKGAG TPYSR ADG AVLRSSIREFLCSEAMH LG+PTTRAL LV TG V RDMFYDG
Sbjct: 122 LKGAGPTPYSRGADGRAVLRSSIREFLCSEAMHHLGVPTTRALSLVGTGDAVVRDMFYDG 181
Query: 285 NPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSES 344
+P+ EPGAIVCRVA SF+RFG++++ ++RG D+ ++R D+ I F + ++
Sbjct: 182 HPQREPGAIVCRVAPSFIRFGNFELPSARG--DIALLRQWVDFTIARDFPALAGAGEA-- 237
Query: 345 LSFSTGDEDHSVVDLTSNKYAAWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTI 404
YA W +V ERTA +VA W VGF HGV+NTDNMSILGLTI
Sbjct: 238 ------------------LYAGWFAQVCERTAVMVAHWMRVGFVHGVMNTDNMSILGLTI 279
Query: 405 DYGPFGFLDAFDPSFTPNTTDLPGRRYCFANQPDIGLWNIAQFSTTLA 452
DYGP+G++D +DP +TPNTTD GRRY F QP + WN+ + + LA
Sbjct: 280 DYGPYGWVDDYDPDWTPNTTDAQGRRYRFGTQPQVAYWNLGRLAQALA 327
>sp|Q3BSE3|Y2589_XANC5 UPF0061 protein XCV2589 OS=Xanthomonas campestris pv. vesicatoria
(strain 85-10) GN=XCV2589 PE=3 SV=2
Length = 518
Score = 348 bits (894), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 183/365 (50%), Positives = 232/365 (63%), Gaps = 25/365 (6%)
Query: 105 LNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKE 164
L++D+ ++LPGDP + REV A ++ V P+ V P L+A S +A L L+ E
Sbjct: 4 LHFDNRLRQQLPGDPEEGARRREV-GAAWSSVLPTP-VAAPYLIAHSAEMAQVLGLEAAE 61
Query: 165 FERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQ 224
F F G G P+A YGGHQFG WAGQLGDGRAI+LGE + R+ELQ
Sbjct: 62 IASAQFAQVFGGNALYPGMQPWAVNYGGHQFGHWAGQLGDGRAISLGEAIGTDGGRYELQ 121
Query: 225 LKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDG 284
LKGAG TPYSR ADG AVLRSSIREFLCSEAMH LG+PTTRAL LV TG+ V RDMFYDG
Sbjct: 122 LKGAGPTPYSRGADGRAVLRSSIREFLCSEAMHHLGVPTTRALSLVGTGEAVVRDMFYDG 181
Query: 285 NPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSES 344
+P+ EPGAIVCRVA SF+RFG++++ ++RG D+ +++ D+ I F + ++
Sbjct: 182 HPQREPGAIVCRVAPSFIRFGNFELPSARG--DIALLKQWVDFTIARDFPALAGAGEA-- 237
Query: 345 LSFSTGDEDHSVVDLTSNKYAAWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTI 404
YA W +V ERTA +VA W VGF HGV+NTDNMSILGLTI
Sbjct: 238 ------------------LYADWFAQVCERTAVMVAHWMRVGFVHGVMNTDNMSILGLTI 279
Query: 405 DYGPFGFLDAFDPSFTPNTTDLPGRRYCFANQPDIGLWNIAQFSTTLAAAKLIDDKEANY 464
DYGP+G++D +DP +TPNTTD GRRY F QP + WN+ + + LA D Y
Sbjct: 280 DYGPYGWVDDYDPDWTPNTTDAQGRRYRFGTQPQVAYWNLGRLAQALAPL-FADQALLQY 338
Query: 465 VMERF 469
++RF
Sbjct: 339 GLDRF 343
>sp|Q87A39|Y1992_XYLFT UPF0061 protein PD_1992 OS=Xylella fastidiosa (strain Temecula1 /
ATCC 700964) GN=PD_1992 PE=3 SV=1
Length = 519
Score = 343 bits (879), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/348 (51%), Positives = 221/348 (63%), Gaps = 24/348 (6%)
Query: 105 LNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKE 164
L +++ F+ LP DP R+VL A +++V+P+ V P L+A+S VA L D +E
Sbjct: 4 LRFNNRFIDVLPCDPEVSLRSRQVLEA-WSRVAPTP-VPMPCLLAYSSEVAAILNFDAEE 61
Query: 165 FERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQ 224
P F FSG G PYA YGGHQFG W GQLGDGR ITLGE+L +ELQ
Sbjct: 62 LVTPRFVEVFSGNALYTGMQPYAVNYGGHQFGQWVGQLGDGRVITLGELLGADGVYYELQ 121
Query: 225 LKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDG 284
LKGAG TPYSR ADG AVLRSSIREFLCSEAMH LGIPTTRAL L+ TG V RDM YDG
Sbjct: 122 LKGAGPTPYSRGADGRAVLRSSIREFLCSEAMHHLGIPTTRALSLIATGDTVIRDMLYDG 181
Query: 285 NPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSES 344
+P EP AIVCRVA SF+RFG++++ ASRG D+D++R L ++ I + H+ ++
Sbjct: 182 HPAPEPSAIVCRVAPSFIRFGTFELPASRG--DIDLLRRLVEFTIIRDYPHLHGAGET-- 237
Query: 345 LSFSTGDEDHSVVDLTSNKYAAWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTI 404
YA W E+ RTA LVA W VGF HGV+NTDNMSILGLTI
Sbjct: 238 ------------------LYADWFAEICTRTAELVAHWMRVGFVHGVMNTDNMSILGLTI 279
Query: 405 DYGPFGFLDAFDPSFTPNTTDLPGRRYCFANQPDIGLWNIAQFSTTLA 452
DYGP+G++D D +TPN TD+ RRY F QP + WN+ + LA
Sbjct: 280 DYGPYGWIDNNDLDWTPNVTDVQSRRYRFGAQPQVAYWNLGCLARALA 327
>sp|Q5GZ99|Y2718_XANOR UPF0061 protein XOO2718 OS=Xanthomonas oryzae pv. oryzae (strain
KACC10331 / KXO85) GN=XOO2718 PE=3 SV=2
Length = 518
Score = 341 bits (874), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 179/351 (50%), Positives = 226/351 (64%), Gaps = 24/351 (6%)
Query: 102 LEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELD 161
+ L++D+ ++LPG + REV A ++ V P+ V P L+A S +A L LD
Sbjct: 1 MTQLHFDNRLRQQLPGYQEEGARRREV-RAAWSAVMPT-PVAAPYLIAHSAEMAHVLGLD 58
Query: 162 PKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERW 221
E F F G G P+A YGGHQFG WAGQLGDGRAI+LGE + + R+
Sbjct: 59 ASEVASAAFAQVFGGNALYPGMQPWAVNYGGHQFGHWAGQLGDGRAISLGEAIGIDGGRY 118
Query: 222 ELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMF 281
ELQLKGAG TPYSR ADG AVLRSSIREFLCSE+MH LG+PTTRAL LV TG V RDMF
Sbjct: 119 ELQLKGAGPTPYSRGADGRAVLRSSIREFLCSESMHHLGVPTTRALSLVGTGDAVVRDMF 178
Query: 282 YDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNK 341
YDG P+ EPGAIVCRVA SF+RFG++++ ++RG D ++R D+ I F E +
Sbjct: 179 YDGRPQREPGAIVCRVAPSFIRFGNFELPSARG--DNALLRQWVDFTIARDF--PELVGT 234
Query: 342 SESLSFSTGDEDHSVVDLTSNKYAAWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILG 401
+E+L YA W +V +RTA +VA W VGF HGV+NTDNMSILG
Sbjct: 235 AEAL------------------YADWFAQVCQRTAVMVAHWMRVGFVHGVMNTDNMSILG 276
Query: 402 LTIDYGPFGFLDAFDPSFTPNTTDLPGRRYCFANQPDIGLWNIAQFSTTLA 452
LTIDYGP+G++D +DP +TPNTTD GRRY F QP + WN+ + + +A
Sbjct: 277 LTIDYGPYGWVDDYDPDWTPNTTDAQGRRYRFGTQPQVAYWNLGRLAQAMA 327
>sp|Q2P2A9|Y2563_XANOM UPF0061 protein XOO2563 OS=Xanthomonas oryzae pv. oryzae (strain
MAFF 311018) GN=XOO2563 PE=3 SV=1
Length = 518
Score = 341 bits (874), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 179/351 (50%), Positives = 226/351 (64%), Gaps = 24/351 (6%)
Query: 102 LEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELD 161
+ L++D+ ++LPG + REV A ++ V P+ V P L+A S +A L LD
Sbjct: 1 MTQLHFDNRLRQQLPGYQEEGARRREV-RAAWSAVMPT-PVAAPYLIAHSAEMAHVLGLD 58
Query: 162 PKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERW 221
E F F G G P+A YGGHQFG WAGQLGDGRAI+LGE + + R+
Sbjct: 59 ASEVASAAFAQVFGGNALYPGMQPWAVNYGGHQFGHWAGQLGDGRAISLGEAIGIDGGRY 118
Query: 222 ELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMF 281
ELQLKGAG TPYSR ADG AVLRSSIREFLCSE+MH LG+PTTRAL LV TG V RDMF
Sbjct: 119 ELQLKGAGPTPYSRGADGRAVLRSSIREFLCSESMHHLGVPTTRALSLVGTGDAVVRDMF 178
Query: 282 YDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNK 341
YDG P+ EPGAIVCRVA SF+RFG++++ ++RG D ++R D+ I F E +
Sbjct: 179 YDGRPQREPGAIVCRVAPSFIRFGNFELPSARG--DNALLRQWVDFTIARDF--PELVGT 234
Query: 342 SESLSFSTGDEDHSVVDLTSNKYAAWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILG 401
+E+L YA W +V +RTA +VA W VGF HGV+NTDNMSILG
Sbjct: 235 AEAL------------------YADWFAQVCQRTAVMVAHWMRVGFVHGVMNTDNMSILG 276
Query: 402 LTIDYGPFGFLDAFDPSFTPNTTDLPGRRYCFANQPDIGLWNIAQFSTTLA 452
LTIDYGP+G++D +DP +TPNTTD GRRY F QP + WN+ + + +A
Sbjct: 277 LTIDYGPYGWVDDYDPDWTPNTTDAQGRRYRFGTQPQVAYWNLGRLAQAMA 327
>sp|B2SHR2|Y396_XANOP UPF0061 protein PXO_00396 OS=Xanthomonas oryzae pv. oryzae (strain
PXO99A) GN=PXO_00396 PE=3 SV=1
Length = 518
Score = 340 bits (873), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 179/351 (50%), Positives = 226/351 (64%), Gaps = 24/351 (6%)
Query: 102 LEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELD 161
+ L++D+ ++LPG + REV A ++ V P+ V P L+A S +A L LD
Sbjct: 1 MTQLHFDNRLRQQLPGYQEEGARRREV-RAAWSAVMPT-PVAAPYLIAHSAEMAHVLGLD 58
Query: 162 PKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERW 221
E F F G G P+A YGGHQFG WAGQLGDGRAI+LGE + + R+
Sbjct: 59 ASEVASAAFAQVFGGNALYPGMQPWAVNYGGHQFGHWAGQLGDGRAISLGEAIGIDGGRY 118
Query: 222 ELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMF 281
ELQLKGAG TPYSR ADG AVLRSSIREFLCSE+MH LG+PTTRAL LV TG V RDMF
Sbjct: 119 ELQLKGAGPTPYSRGADGRAVLRSSIREFLCSESMHHLGVPTTRALSLVGTGDAVVRDMF 178
Query: 282 YDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNK 341
YDG P+ EPGAIVCRVA SF+RFG++++ ++RG D ++R D+ I F E +
Sbjct: 179 YDGRPQREPGAIVCRVAPSFIRFGNFELPSARG--DNALLRQWVDFTIARDF--PELVGT 234
Query: 342 SESLSFSTGDEDHSVVDLTSNKYAAWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILG 401
+E+L YA W +V +RTA +VA W VGF HGV+NTDNMSILG
Sbjct: 235 AEAL------------------YADWFAQVCQRTAVMVAHWMRVGFVHGVMNTDNMSILG 276
Query: 402 LTIDYGPFGFLDAFDPSFTPNTTDLPGRRYCFANQPDIGLWNIAQFSTTLA 452
LTIDYGP+G++D +DP +TPNTTD GRRY F QP + WN+ + + +A
Sbjct: 277 LTIDYGPYGWVDDYDPDWTPNTTDAQGRRYRFGTQPQVAYWNLGRLAQAVA 327
>sp|Q9PA99|Y2619_XYLFA UPF0061 protein XF_2619 OS=Xylella fastidiosa (strain 9a5c)
GN=XF_2619 PE=3 SV=1
Length = 519
Score = 338 bits (867), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 179/348 (51%), Positives = 218/348 (62%), Gaps = 24/348 (6%)
Query: 105 LNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKE 164
L +++ F+ LP DP R+VL A ++ V+P+ V P L+A+S VA L D +E
Sbjct: 4 LRFNNRFIAVLPCDPEVSLRSRQVLEA-WSGVAPTP-VPVPCLLAYSSEVAAILNFDAEE 61
Query: 165 FERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQ 224
P F FSG G PYA YGGHQFG W GQLGDGR ITLGE+L +ELQ
Sbjct: 62 LVTPRFVEVFSGNALYPGMQPYAVNYGGHQFGQWVGQLGDGRVITLGELLGADGVYYELQ 121
Query: 225 LKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDG 284
LKGAG TPYSR ADG AVLRSSIREFLCSEAMH LGIPTTRAL L+ TG V RDM YDG
Sbjct: 122 LKGAGPTPYSRGADGRAVLRSSIREFLCSEAMHHLGIPTTRALSLIATGDTVIRDMLYDG 181
Query: 285 NPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSES 344
+P EP AIVCRVA SF+RFG++++ ASRG D+D++R L ++ I + H+ ++
Sbjct: 182 HPAPEPSAIVCRVAPSFVRFGTFELPASRG--DIDLLRRLVEFTIMRDYPHLHGAGET-- 237
Query: 345 LSFSTGDEDHSVVDLTSNKYAAWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTI 404
Y W E+ RTA LVA W VGF HGV+NTDNMSILGLTI
Sbjct: 238 ------------------LYVDWFAEICTRTAELVAHWMRVGFVHGVMNTDNMSILGLTI 279
Query: 405 DYGPFGFLDAFDPSFTPNTTDLPGRRYCFANQPDIGLWNIAQFSTTLA 452
DYGP+G++D D +TPN TD RRY F QP + WN+ + LA
Sbjct: 280 DYGPYGWIDNNDLDWTPNVTDAQSRRYRFGAQPQVAYWNLGCLARALA 327
>sp|A5FG48|Y2793_FLAJ1 UPF0061 protein Fjoh_2793 OS=Flavobacterium johnsoniae (strain ATCC
17061 / DSM 2064 / UW101) GN=Fjoh_2793 PE=3 SV=1
Length = 522
Score = 328 bits (842), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 168/370 (45%), Positives = 234/370 (63%), Gaps = 27/370 (7%)
Query: 102 LEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELD 161
+++L ++ F ELP DP + R+V + ++ V+P+ + NP+L+ SE A + +
Sbjct: 1 MKNLKINNRFTAELPADPDLTNETRQVKNTAFSYVNPT-KPSNPKLIHASEETAALVGIS 59
Query: 162 PKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERW 221
+E +F FSG L PYA CY GHQFG WAGQLGDGRAI L E+ N + +
Sbjct: 60 KEEIHSEEFLNVFSGKEILPETQPYAMCYAGHQFGNWAGQLGDGRAINLTEVEN-NNTFY 118
Query: 222 ELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMF 281
LQLKGAGKTPYSR ADGLAVLRSSIRE+LC+EAM+ LG+PTTR+L L+ +G V RD+
Sbjct: 119 TLQLKGAGKTPYSRTADGLAVLRSSIREYLCAEAMYHLGVPTTRSLSLILSGDQVLRDIL 178
Query: 282 YDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNK 341
Y+GNP E GA+VCRVA SF+RFGS+++ A+R + L ++ +Y I+H+F I K
Sbjct: 179 YNGNPAYEKGAVVCRVAPSFIRFGSFEMLAARNE--LKNLKQFVEYTIKHYFPEITGEPK 236
Query: 342 SESLSFSTGDEDHSVVDLTSNKYAAWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILG 401
+ L F +VA+ T ++ WQ VGF HGV+NTDNMS+ G
Sbjct: 237 EQYLQFFK--------------------KVADTTREMILHWQRVGFVHGVMNTDNMSVHG 276
Query: 402 LTIDYGPFGFLDAFDPSFTPNTTDLPGRRYCFANQPDIGLWNIAQFSTTLAAAKLIDDKE 461
+TIDYGP+G+L+ +DP++TPNTTD +RY F NQP + WN+ Q + A LI++ E
Sbjct: 277 ITIDYGPYGWLENYDPNWTPNTTDSQNKRYRFGNQPQVAHWNLYQLAN--AIYPLINETE 334
Query: 462 A-NYVMERFV 470
++E F+
Sbjct: 335 GLEKILESFM 344
>sp|Q11T54|Y2147_CYTH3 UPF0061 protein CHU_2147 OS=Cytophaga hutchinsonii (strain ATCC
33406 / NCIMB 9469) GN=CHU_2147 PE=3 SV=1
Length = 515
Score = 328 bits (840), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 174/344 (50%), Positives = 215/344 (62%), Gaps = 28/344 (8%)
Query: 109 HSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERP 168
++F PGD ++ R+ Y V P+ V +PQL+AWS VA+ L L E P
Sbjct: 11 NTFTETFPGDLSMNNTTRQTPGVLYCSVLPTP-VHHPQLLAWSADVAEMLGL---ESPVP 66
Query: 169 DFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGA 228
+ L G T PYA CY GHQFG WAGQLGDGRAI+LG S +ELQLKGA
Sbjct: 67 EDVLILGGNTVNPTMKPYASCYAGHQFGNWAGQLGDGRAISLGFCSGKDSMEYELQLKGA 126
Query: 229 GKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKE 288
G TPYSR +DG AVLRSS+RE+L SEAMH+LG+PTTRAL LV+TG V RDMFY+G+
Sbjct: 127 GPTPYSRNSDGRAVLRSSLREYLMSEAMHYLGVPTTRALSLVSTGDAVLRDMFYNGHAAY 186
Query: 289 EPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFS 348
EPGA+V RVA SF+RFG+++I A R DL + L D+ I ++ I ++
Sbjct: 187 EPGAVVLRVAPSFIRFGNFEILAERNNRDLS--QQLCDWVITRYYPEIRGEDR------- 237
Query: 349 TGDEDHSVVDLTSNKYAAWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTIDYGP 408
VV L VAERTA +V QW VGF HGV+NTDNMSILG+TIDYGP
Sbjct: 238 -------VVQLFQ--------AVAERTADMVVQWLRVGFVHGVMNTDNMSILGVTIDYGP 282
Query: 409 FGFLDAFDPSFTPNTTDLPGRRYCFANQPDIGLWNIAQFSTTLA 452
+ F+D +D FTPNTTDLPGRRY F NQ + WN+ + + LA
Sbjct: 283 YSFVDEYDARFTPNTTDLPGRRYAFGNQAAVAYWNLGRLANALA 326
>sp|Q9BVL4|SELO_HUMAN Selenoprotein O OS=Homo sapiens GN=SELO PE=2 SV=3
Length = 669
Score = 304 bits (779), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 177/367 (48%), Positives = 217/367 (59%), Gaps = 35/367 (9%)
Query: 102 LEDLNWDHSFVRELP------GDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVA 155
L L +D+ +R LP G S PR V AC+T+V P+ + P+LVA SE
Sbjct: 45 LAGLRFDNRALRALPVEAPPPGPEGAPSAPRPVPGACFTRVQPTP-LRQPRLVALSEPAL 103
Query: 156 DSLELDPKEFERPDFP--LFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEI 213
L L + LFFSG L GA P A CY GHQFG +AGQLGDG A+ LGE+
Sbjct: 104 ALLGLGAPPAREAEAEAALFFSGNALLPGAEPAAHCYCGHQFGQFAGQLGDGAAMYLGEV 163
Query: 214 LNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTG 273
ERWELQLKGAG TP+SR ADG VLRSSIREFLCSEAM LG+PTTRA VT+
Sbjct: 164 CTATGERWELQLKGAGPTPFSRQADGRKVLRSSIREFLCSEAMFHLGVPTTRAGACVTSE 223
Query: 274 KFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQI------HASRGQEDL---DIVRTL 324
V RD+FYDGNPK E +V RVA +F+RFGS++I H R + DI L
Sbjct: 224 STVVRDVFYDGNPKYEQCTVVLRVASTFIRFGSFEIFKSADEHTGRAGPSVGRNDIRVQL 283
Query: 325 ADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYAAWAVEVAERTASLVAQWQG 384
DY I + I+ + S+S+ + AA+ EV RTA +VA+WQ
Sbjct: 284 LDYVISSFYPEIQAAHASDSV----------------QRNAAFFREVTRRTARMVAEWQC 327
Query: 385 VGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTDLPGRRYCFANQPDIGLWNI 444
VGF HGVLNTDNMSILGLTIDYGPFGFLD +DP N +D G RY ++ QP++ WN+
Sbjct: 328 VGFCHGVLNTDNMSILGLTIDYGPFGFLDRYDPDHVCNASDNTG-RYAYSKQPEVCRWNL 386
Query: 445 AQFSTTL 451
+ + L
Sbjct: 387 RKLAEAL 393
>sp|Q9DBC0|SELO_MOUSE Selenoprotein O OS=Mus musculus GN=Selo PE=1 SV=4
Length = 667
Score = 300 bits (769), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 176/369 (47%), Positives = 222/369 (60%), Gaps = 37/369 (10%)
Query: 102 LEDLNWDHSFVRELP------GDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVA 155
L L +D+ +RELP G + + PR V AC+++ P A + P+LVA SE
Sbjct: 46 LAGLRFDNRALRELPVETPPPGPEDSLATPRPVPGACFSRARP-APLRRPRLVALSEPAL 104
Query: 156 DSLELDPKEFERPDFP--LFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEI 213
L L+ E + LFFSG L G P A CY GHQFG +AGQLGDG A+ LGE+
Sbjct: 105 ALLGLEASEEAEVEAEAALFFSGNALLPGTEPAAHCYCGHQFGQFAGQLGDGAAMYLGEV 164
Query: 214 LNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTG 273
ERWELQLKGAG TP+SR ADG VLRSSIREFLCSEAM LGIPTTRA VT+
Sbjct: 165 CTAAGERWELQLKGAGPTPFSRQADGRKVLRSSIREFLCSEAMFHLGIPTTRAGACVTSE 224
Query: 274 KFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQI------HASR-----GQEDLDIVR 322
V RD+FYDGNPK E +V R+A +F+RFGS++I H R G++D+ +
Sbjct: 225 STVMRDVFYDGNPKYEKCTVVLRIAPTFIRFGSFEIFKPPDEHTGRAGPSVGRDDIRV-- 282
Query: 323 TLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYAAWAVEVAERTASLVAQW 382
L DY I + I+ + T D D+ + AA+ EV +RTA +VA+W
Sbjct: 283 QLLDYVISSFYPEIQAAH--------TCDTDN------IQRNAAFFREVTQRTARMVAEW 328
Query: 383 QGVGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTDLPGRRYCFANQPDIGLW 442
Q VGF HGVLNTDNMSI+GLTIDYGPFGFLD +DP N +D G RY ++ QP + W
Sbjct: 329 QCVGFCHGVLNTDNMSIVGLTIDYGPFGFLDRYDPDHICNASDNAG-RYTYSKQPQVCKW 387
Query: 443 NIAQFSTTL 451
N+ + + L
Sbjct: 388 NLQKLAEAL 396
>sp|Q1LVN8|SELO_DANRE Selenoprotein O OS=Danio rerio GN=selo PE=3 SV=2
Length = 692
Score = 298 bits (764), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 172/386 (44%), Positives = 230/386 (59%), Gaps = 44/386 (11%)
Query: 89 GGDESKMTKKLKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLV 148
G D+ ++ +LE L +D+ +++LP DP T+ R+V +C+++V P+ ++NP+ V
Sbjct: 28 GMDDMGVSLSRSSLERLEFDNVALKKLPLDPSTEPGVRQVRGSCFSRVQPTP-LKNPEFV 86
Query: 149 AWSESVADSLELDPKE-FERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRA 207
A S L LD +E + P P + SG+ + G+ P A CY GHQFG +AGQLGDG A
Sbjct: 87 AVSAPALALLGLDAEEVLKDPLGPEYLSGSKVMPGSEPAAHCYCGHQFGQFAGQLGDGAA 146
Query: 208 ITLGEILNLKSE-----------RWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAM 256
LGE+ + RWE+Q+KGAG TPYSR ADG VLRSSIREFLCSEA+
Sbjct: 147 CYLGEVKAPAGQSPELLRENPTGRWEIQVKGAGLTPYSRQADGRKVLRSSIREFLCSEAV 206
Query: 257 HFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQIHA----- 311
LG+PTTRA +VT+ V RD+FYDGNP+ E ++V R+A SF+RFGS++I
Sbjct: 207 FALGVPTTRAGSVVTSDSRVMRDIFYDGNPRMERCSVVLRIAPSFIRFGSFEIFKRADEF 266
Query: 312 ------SRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYA 365
S G ++L + +Y I + + I + DLT +
Sbjct: 267 TGRQGPSYGHDELRT--QMLEYVIENFYPEIH----------------RNYPDLT-ERNT 307
Query: 366 AWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTD 425
A+ EV RTA LVAQWQ VGF HGVLNTDNMSILGLT+DYGPFGF+D FDP F N +D
Sbjct: 308 AFFKEVTVRTARLVAQWQCVGFCHGVLNTDNMSILGLTLDYGPFGFMDRFDPDFICNASD 367
Query: 426 LPGRRYCFANQPDIGLWNIAQFSTTL 451
G RY + QP I WN+A+ + L
Sbjct: 368 NSG-RYSYQAQPAICRWNLARLAEAL 392
>sp|Q3SEY2|Y1019_THIDA UPF0061 protein Tbd_1019 OS=Thiobacillus denitrificans (strain ATCC
25259) GN=Tbd_1019 PE=3 SV=1
Length = 488
Score = 284 bits (727), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 161/353 (45%), Positives = 207/353 (58%), Gaps = 46/353 (13%)
Query: 99 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSL 158
+ LE L +D+ F R LP Y +V P+ V +P LV +S L
Sbjct: 1 MATLESLTFDNGFAR-LP-------------ETYYARVCPT-PVPDPYLVCYSPEALSLL 45
Query: 159 ELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKS 218
+LD E +RP+ +G L G A Y GHQFG + QLGDGRAI LGE+ N
Sbjct: 46 DLDATELKRPETIETLAGNRLLPGMDAIAALYAGHQFGHYVPQLGDGRAILLGEVRNRAG 105
Query: 219 ERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTR 278
E WE+QLKGAG+TPYSR DG AVLRSSIREFLCSEAMH L IPTTRAL +V + V R
Sbjct: 106 EGWEIQLKGAGRTPYSRGGDGRAVLRSSIREFLCSEAMHALDIPTTRALAVVGSDHPVYR 165
Query: 279 DMFYDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIEN 338
+ EE A+V R+A SF+RFGS+++ R Q ++ +R LADY I ++ ++
Sbjct: 166 E-------DEETAALVTRLAPSFVRFGSFEVFYYRNQ--VEPIRHLADYVIARYYPELKT 216
Query: 339 MNKSESLSFSTGDEDHSVVDLTSNKYAAWAVEVAERTASLVAQWQGVGFTHGVLNTDNMS 398
+ ++ Y + +V+ RTA L+AQWQ VGF+HGV+NTDNMS
Sbjct: 217 L---------------------ADPYPEFLRQVSLRTAELMAQWQAVGFSHGVMNTDNMS 255
Query: 399 ILGLTIDYGPFGFLDAFDPSFTPNTTDLPGRRYCFANQPDIGLWNIAQFSTTL 451
ILGLT+DYGPFGFLDAFDP F N +D G RY F QPD+ WN+ + + L
Sbjct: 256 ILGLTLDYGPFGFLDAFDPGFVCNHSDTGG-RYAFDQQPDVAAWNLTKLAQAL 307
>sp|B7L6H9|YDIU_ECO55 UPF0061 protein YdiU OS=Escherichia coli (strain 55989 / EAEC)
GN=ydiU PE=3 SV=1
Length = 478
Score = 282 bits (721), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 160/333 (48%), Positives = 206/333 (61%), Gaps = 34/333 (10%)
Query: 126 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVP 185
R+ L A YT +SP+ + N +L+ + +A++L + F+ + + G T L G P
Sbjct: 10 RDELPATYTALSPTP-LNNARLIWHNTELANTLSIPSSLFK--NGAGVWGGETLLPGMSP 66
Query: 186 YAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRS 245
AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS
Sbjct: 67 LAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRS 126
Query: 246 SIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFG 305
+IRE L SEAMH+LGIPTTRAL +VT+ V R+ EPGA++ RVA S LRFG
Sbjct: 127 TIRESLASEAMHYLGIPTTRALSIVTSDSPVYRETV-------EPGAMLMRVAPSHLRFG 179
Query: 306 SYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYA 365
++ R + + VR LAD+AIRH++ H+E+ DED KY
Sbjct: 180 HFEHFYYRREP--EKVRQLADFAIRHYWSHLED------------DED---------KYR 216
Query: 366 AWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTD 425
W +V RTASL+AQWQ VGF HGV+NTDNMS+LGLT+DYGPFGFLD ++P F N +D
Sbjct: 217 LWFNDVVARTASLIAQWQTVGFAHGVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSD 276
Query: 426 LPGRRYCFANQPDIGLWNIAQFSTTLAAAKLID 458
G RY F NQP + LWN+ + + TL+ +D
Sbjct: 277 HQG-RYSFDNQPAVALWNLQRLAQTLSPFVAVD 308
>sp|B6I8R1|YDIU_ECOSE UPF0061 protein YdiU OS=Escherichia coli (strain SE11) GN=ydiU PE=3
SV=1
Length = 478
Score = 281 bits (718), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 159/333 (47%), Positives = 205/333 (61%), Gaps = 34/333 (10%)
Query: 126 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVP 185
R+ L YT +SP+ + N +L+ + +A++L + F+ + + G T L G P
Sbjct: 10 RDELPETYTALSPTP-LNNARLIWHNTELANTLSIPSSLFK--NAAGVWGGETLLPGMSP 66
Query: 186 YAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRS 245
AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS
Sbjct: 67 LAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRS 126
Query: 246 SIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFG 305
+IRE L SEAMH+LGIPTTRAL +VT+ V R+ EPGA++ RVA S LRFG
Sbjct: 127 TIRESLASEAMHYLGIPTTRALSIVTSDSPVYRETV-------EPGAMLIRVAPSHLRFG 179
Query: 306 SYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYA 365
++ R + + VR LAD+AIRH++ H+E+ DED KY
Sbjct: 180 HFEHFYYRREP--EKVRQLADFAIRHYWSHLED------------DED---------KYR 216
Query: 366 AWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTD 425
W +V RTASL+AQWQ VGF HGV+NTDNMS+LGLT+DYGPFGFLD ++P F N +D
Sbjct: 217 LWFNDVVARTASLIAQWQTVGFAHGVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSD 276
Query: 426 LPGRRYCFANQPDIGLWNIAQFSTTLAAAKLID 458
G RY F NQP + LWN+ + + TL+ +D
Sbjct: 277 HQG-RYSFDNQPAVALWNLQRLAQTLSPFVAVD 308
>sp|A7ZMH3|YDIU_ECO24 UPF0061 protein YdiU OS=Escherichia coli O139:H28 (strain E24377A /
ETEC) GN=ydiU PE=3 SV=1
Length = 478
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 159/333 (47%), Positives = 206/333 (61%), Gaps = 34/333 (10%)
Query: 126 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVP 185
R+ L A YT +SP+ + N +L+ + +A++L + F+ + + G T L G P
Sbjct: 10 RDELPATYTALSPTP-LNNARLIWHNTELANTLSIPSSLFK--NGAGVWGGETLLPGMSP 66
Query: 186 YAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRS 245
AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS
Sbjct: 67 LAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRS 126
Query: 246 SIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFG 305
+IRE L SEAMH+LGIPTTRAL +VT+ V R+ EPGA++ RVA S LRFG
Sbjct: 127 TIRESLASEAMHYLGIPTTRALSIVTSDSPVYRETV-------EPGAMLMRVAPSHLRFG 179
Query: 306 SYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYA 365
++ R + + VR LAD+AIRH++ ++E+ DED KY
Sbjct: 180 HFEHFYYRREP--EKVRQLADFAIRHYWSYLED------------DED---------KYR 216
Query: 366 AWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTD 425
W +V RTASL+AQWQ VGF HGV+NTDNMS+LGLT+DYGPFGFLD ++P F N +D
Sbjct: 217 LWFSDVVARTASLIAQWQTVGFAHGVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSD 276
Query: 426 LPGRRYCFANQPDIGLWNIAQFSTTLAAAKLID 458
G RY F NQP + LWN+ + + TL+ +D
Sbjct: 277 HQG-RYSFDNQPAVALWNLHRLAQTLSPFVAVD 308
>sp|B2U355|YDIU_SHIB3 UPF0061 protein YdiU OS=Shigella boydii serotype 18 (strain CDC
3083-94 / BS512) GN=ydiU PE=3 SV=1
Length = 478
Score = 280 bits (715), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 159/333 (47%), Positives = 204/333 (61%), Gaps = 34/333 (10%)
Query: 126 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVP 185
R+ L YT +SP+ + N +LV + +A++L + F+ + + G L G P
Sbjct: 10 RDELPETYTALSPTP-LNNARLVWHNTELANTLSIPSSLFK--NGAGVWGGEALLPGMSP 66
Query: 186 YAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRS 245
AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS
Sbjct: 67 LAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRS 126
Query: 246 SIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFG 305
+IRE L SEAMH+LGIPTTRAL +VT+ V R+ EPGA++ RVA S LRFG
Sbjct: 127 TIRESLASEAMHYLGIPTTRALSIVTSDSPVYRE-------TAEPGAMLMRVAPSHLRFG 179
Query: 306 SYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYA 365
++ R + + VR LAD+AIRH++ H+E+ DED KY
Sbjct: 180 HFEHFYYRRES--EKVRQLADFAIRHYWSHLED------------DED---------KYR 216
Query: 366 AWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTD 425
W +V RTASL+AQWQ VGF HGV+NTDNMS+LGLT+DYGPFGFLD ++P F N +D
Sbjct: 217 LWFSDVVARTASLIAQWQTVGFAHGVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSD 276
Query: 426 LPGRRYCFANQPDIGLWNIAQFSTTLAAAKLID 458
G RY F NQP + LWN+ + + TL+ +D
Sbjct: 277 HQG-RYSFDNQPAVALWNLQRLAQTLSPFVAVD 308
>sp|B5BA30|YDIU_SALPK UPF0061 protein YdiU OS=Salmonella paratyphi A (strain AKU_12601)
GN=ydiU PE=3 SV=1
Length = 480
Score = 279 bits (714), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 157/344 (45%), Positives = 208/344 (60%), Gaps = 34/344 (9%)
Query: 126 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVP 185
R+ L A YT + P+ ++N +L+ +++ +A L + F+ + + G T L G P
Sbjct: 10 RDELPATYTALLPTP-LKNARLIWYNDELAQQLAIPASLFDATNGAGVWGGETLLPGMSP 68
Query: 186 YAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRS 245
AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS
Sbjct: 69 VAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGSTLDWHLKGAGLTPYSRMGDGRAVLRS 128
Query: 246 SIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFG 305
+IRE L SEAMH+LGIPTTRAL +VT+ V R+ +E GA++ R+AQS +RFG
Sbjct: 129 TIRESLASEAMHYLGIPTTRALSIVTSDTPVQRE-------TQETGAMLMRLAQSHMRFG 181
Query: 306 SYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYA 365
++ R + + V+ LAD+AIRH++ +++ + KYA
Sbjct: 182 HFEHFYYR--REPEKVQQLADFAIRHYWPQWQDV---------------------AEKYA 218
Query: 366 AWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTD 425
W EVA RT L+A+WQ VGF HGV+NTDNMSILGLTIDYGPFGFLD +DP F N +D
Sbjct: 219 LWFEEVAARTGRLIAEWQTVGFAHGVMNTDNMSILGLTIDYGPFGFLDDYDPGFIGNHSD 278
Query: 426 LPGRRYCFANQPDIGLWNIAQFSTTLAAAKLIDDKEANYVMERF 469
G RY F NQP + LWN+ + + TL ID N ++R+
Sbjct: 279 HQG-RYRFDNQPSVALWNLQRLAQTLTPFIEID--ALNRALDRY 319
>sp|Q5PH84|YDIU_SALPA UPF0061 protein YdiU OS=Salmonella paratyphi A (strain ATCC 9150 /
SARB42) GN=ydiU PE=3 SV=1
Length = 480
Score = 279 bits (714), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 157/344 (45%), Positives = 208/344 (60%), Gaps = 34/344 (9%)
Query: 126 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVP 185
R+ L A YT + P+ ++N +L+ +++ +A L + F+ + + G T L G P
Sbjct: 10 RDELPATYTALLPTP-LKNARLIWYNDELAQQLAIPASLFDATNGAGVWGGETLLPGMSP 68
Query: 186 YAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRS 245
AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS
Sbjct: 69 VAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGSTLDWHLKGAGLTPYSRMGDGRAVLRS 128
Query: 246 SIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFG 305
+IRE L SEAMH+LGIPTTRAL +VT+ V R+ +E GA++ R+AQS +RFG
Sbjct: 129 TIRESLASEAMHYLGIPTTRALSIVTSDTPVQRE-------TQETGAMLMRLAQSHMRFG 181
Query: 306 SYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYA 365
++ R + + V+ LAD+AIRH++ +++ + KYA
Sbjct: 182 HFEHFYYR--REPEKVQQLADFAIRHYWPQWQDV---------------------AEKYA 218
Query: 366 AWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTD 425
W EVA RT L+A+WQ VGF HGV+NTDNMSILGLTIDYGPFGFLD +DP F N +D
Sbjct: 219 LWFEEVAARTGRLIAEWQTVGFAHGVMNTDNMSILGLTIDYGPFGFLDDYDPGFIGNHSD 278
Query: 426 LPGRRYCFANQPDIGLWNIAQFSTTLAAAKLIDDKEANYVMERF 469
G RY F NQP + LWN+ + + TL ID N ++R+
Sbjct: 279 HQG-RYRFDNQPSVALWNLQRLAQTLTPFIEID--ALNRALDRY 319
>sp|B7N544|YDIU_ECOLU UPF0061 protein YdiU OS=Escherichia coli O17:K52:H18 (strain UMN026
/ ExPEC) GN=ydiU PE=3 SV=1
Length = 478
Score = 279 bits (714), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 159/333 (47%), Positives = 205/333 (61%), Gaps = 34/333 (10%)
Query: 126 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVP 185
R+ L YT +SP+ + N +L+ + +A++L + P + D ++ G T L G P
Sbjct: 10 RDELPGTYTALSPTP-LNNARLIWHNTELANTLSI-PSSLFKNDAGVW-GGETLLPGMSP 66
Query: 186 YAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRS 245
AQ Y GHQFG+WAGQLGDGR I LGE + LKGAG TPYSR DG AVLRS
Sbjct: 67 LAQVYSGHQFGVWAGQLGDGRGILLGEQRLADGTTMDWHLKGAGLTPYSRMGDGRAVLRS 126
Query: 246 SIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFG 305
+IRE L SEAMH+LGIPTTRAL +VT+ V R+ EPGA++ RVA S LRFG
Sbjct: 127 TIRESLASEAMHYLGIPTTRALSIVTSDSPVYRETV-------EPGAMLMRVAPSHLRFG 179
Query: 306 SYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYA 365
++ R + + VR LAD+AIRH++ H+E+ DED KY
Sbjct: 180 HFEHFYYRREP--EKVRQLADFAIRHYWSHLED------------DED---------KYR 216
Query: 366 AWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTD 425
W +V RTASL+AQWQ VGF HGV+NTDNMS+LGLT+DYGPFGFLD ++P F N +D
Sbjct: 217 LWFSDVVARTASLIAQWQTVGFAHGVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSD 276
Query: 426 LPGRRYCFANQPDIGLWNIAQFSTTLAAAKLID 458
G RY F NQP + LWN+ + + TL+ +D
Sbjct: 277 HQG-RYSFDNQPAVALWNLQRLAQTLSPFVAVD 308
>sp|Q3Z253|YDIU_SHISS UPF0061 protein YdiU OS=Shigella sonnei (strain Ss046) GN=ydiU PE=3
SV=1
Length = 478
Score = 279 bits (714), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 158/333 (47%), Positives = 204/333 (61%), Gaps = 34/333 (10%)
Query: 126 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVP 185
R+ L YT +SP+ + N +L+ + +A++L + F+ + + G L G P
Sbjct: 10 RDELPETYTALSPTP-LNNARLIWHNTELANTLSIPSSLFK--NGAGVWGGEALLPGMSP 66
Query: 186 YAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRS 245
AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS
Sbjct: 67 LAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRS 126
Query: 246 SIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFG 305
+IRE L SEAMH+LGIPTTRAL +VT+ V R+ EPGA++ RVA S LRFG
Sbjct: 127 TIRESLASEAMHYLGIPTTRALSIVTSDSPVYRE-------TAEPGAMLMRVAPSHLRFG 179
Query: 306 SYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYA 365
++ R + + VR LAD+AIRH++ H+E+ DED KY
Sbjct: 180 HFEHFYYRRES--EKVRQLADFAIRHYWSHLED------------DED---------KYR 216
Query: 366 AWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTD 425
W +V RTASL+AQWQ VGF HGV+NTDNMS+LGLT+DYGPFGFLD ++P F N +D
Sbjct: 217 LWFSDVVARTASLIAQWQTVGFAHGVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSD 276
Query: 426 LPGRRYCFANQPDIGLWNIAQFSTTLAAAKLID 458
G RY F NQP + LWN+ + + TL+ +D
Sbjct: 277 HQG-RYSFDNQPAVALWNLQRLAQTLSPFVAVD 308
>sp|A8A0P8|YDIU_ECOHS UPF0061 protein YdiU OS=Escherichia coli O9:H4 (strain HS) GN=ydiU
PE=3 SV=1
Length = 478
Score = 279 bits (714), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 158/333 (47%), Positives = 204/333 (61%), Gaps = 34/333 (10%)
Query: 126 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVP 185
R+ L YT +SP+ + N +L+ + +A++L + F+ + + G L G P
Sbjct: 10 RDELPETYTALSPTP-LNNARLIWHNTELANTLSIPSSLFK--NGAGVWGGEALLPGMSP 66
Query: 186 YAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRS 245
AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS
Sbjct: 67 LAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRS 126
Query: 246 SIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFG 305
+IRE L SEAMH+LGIPTTRAL +VT+ V R+ EPGA++ RVA S LRFG
Sbjct: 127 TIRESLASEAMHYLGIPTTRALSIVTSDSPVYRE-------TAEPGAMLMRVAPSHLRFG 179
Query: 306 SYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYA 365
++ R + + VR LAD+AIRH++ H+E+ DED KY
Sbjct: 180 HFEHFYYRRES--EKVRQLADFAIRHYWSHLED------------DED---------KYR 216
Query: 366 AWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTD 425
W +V RTASL+AQWQ VGF HGV+NTDNMS+LGLT+DYGPFGFLD ++P F N +D
Sbjct: 217 LWFSDVVARTASLIAQWQTVGFAHGVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSD 276
Query: 426 LPGRRYCFANQPDIGLWNIAQFSTTLAAAKLID 458
G RY F NQP + LWN+ + + TL+ +D
Sbjct: 277 HQG-RYSFDNQPAVALWNLQRLAQTLSPFVAVD 308
>sp|B1IQ50|YDIU_ECOLC UPF0061 protein YdiU OS=Escherichia coli (strain ATCC 8739 / DSM
1576 / Crooks) GN=ydiU PE=3 SV=1
Length = 478
Score = 279 bits (714), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 158/333 (47%), Positives = 204/333 (61%), Gaps = 34/333 (10%)
Query: 126 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVP 185
R+ L YT +SP+ + N +L+ + +A++L + F+ + + G L G P
Sbjct: 10 RDELPETYTALSPTP-LNNARLIWHNTELANTLSIPSSLFK--NGAGVWGGEALLPGMSP 66
Query: 186 YAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRS 245
AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS
Sbjct: 67 LAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRS 126
Query: 246 SIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFG 305
+IRE L SEAMH+LGIPTTRAL +VT+ V R+ EPGA++ RVA S LRFG
Sbjct: 127 TIRESLASEAMHYLGIPTTRALSIVTSDSPVYRE-------TAEPGAMLMRVAPSHLRFG 179
Query: 306 SYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYA 365
++ R + + VR LAD+AIRH++ H+E+ DED KY
Sbjct: 180 HFEHFYYRRES--EKVRQLADFAIRHYWSHLED------------DED---------KYR 216
Query: 366 AWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTD 425
W +V RTASL+AQWQ VGF HGV+NTDNMS+LGLT+DYGPFGFLD ++P F N +D
Sbjct: 217 LWFSDVVARTASLIAQWQTVGFAHGVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSD 276
Query: 426 LPGRRYCFANQPDIGLWNIAQFSTTLAAAKLID 458
G RY F NQP + LWN+ + + TL+ +D
Sbjct: 277 HQG-RYSFDNQPAVALWNLQRLAQTLSPFVAVD 308
>sp|Q8ZPS5|YDIU_SALTY UPF0061 protein YdiU OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=ydiU PE=3 SV=1
Length = 480
Score = 278 bits (712), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 157/344 (45%), Positives = 207/344 (60%), Gaps = 34/344 (9%)
Query: 126 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVP 185
R+ L A YT + P+ ++N +L+ +++ +A L + F+ + + G T L G P
Sbjct: 10 RDELPATYTALLPTP-LKNARLIWYNDELAQQLAIPASLFDATNGAGVWGGETLLPGMSP 68
Query: 186 YAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRS 245
AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS
Sbjct: 69 VAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGSTLDWHLKGAGLTPYSRMGDGRAVLRS 128
Query: 246 SIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFG 305
+IRE L SEAMH+LGIPTTRAL +VT+ V R+ +E GA++ R+AQS +RFG
Sbjct: 129 TIRESLASEAMHYLGIPTTRALSIVTSDTPVQRE-------TQETGAMLMRLAQSHMRFG 181
Query: 306 SYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYA 365
++ R + + V+ LAD+AIRH++ +++ KYA
Sbjct: 182 HFEHFYYR--REPEKVQQLADFAIRHYWPQWQDV---------------------PEKYA 218
Query: 366 AWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTD 425
W EVA RT L+A+WQ VGF HGV+NTDNMSILGLTIDYGPFGFLD +DP F N +D
Sbjct: 219 LWFEEVAARTGRLIAEWQTVGFAHGVMNTDNMSILGLTIDYGPFGFLDDYDPGFIGNHSD 278
Query: 426 LPGRRYCFANQPDIGLWNIAQFSTTLAAAKLIDDKEANYVMERF 469
G RY F NQP + LWN+ + + TL ID N ++R+
Sbjct: 279 HQG-RYRFDNQPSVALWNLQRLAQTLTPFIEID--ALNRALDRY 319
>sp|Q8Z6I8|YDIU_SALTI UPF0061 protein YdiU OS=Salmonella typhi GN=ydiU PE=3 SV=1
Length = 480
Score = 278 bits (712), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 155/344 (45%), Positives = 208/344 (60%), Gaps = 34/344 (9%)
Query: 126 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVP 185
R+ L A YT + P+ ++N +L+ +++ +A L + F+ + + G T L G P
Sbjct: 10 RDELPATYTALLPTP-LKNARLIWYNDELAQQLAIPASLFDATNGAGVWGGETLLPGMSP 68
Query: 186 YAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRS 245
AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS
Sbjct: 69 VAQVYSGHQFGIWAGQLGDGRGILLGEQLLADGSTLDWHLKGAGLTPYSRMGDGRAVLRS 128
Query: 246 SIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFG 305
+IRE L SEAMH+LGIPTTRAL +V + V R+ +E GA++ R+AQS +RFG
Sbjct: 129 TIRESLASEAMHYLGIPTTRALSIVASDTPVQRE-------TQETGAMLMRLAQSHMRFG 181
Query: 306 SYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYA 365
++ R + + V+ LAD+AIRH++ +++ + KYA
Sbjct: 182 HFEHFYYR--REPEKVQQLADFAIRHYWPQWQDV---------------------AEKYA 218
Query: 366 AWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTD 425
W EVA RT L+A+WQ VGF+HGV+NTDNMSILGLTIDYGPFGFLD +DP F N +D
Sbjct: 219 LWFEEVAARTGRLIAEWQTVGFSHGVMNTDNMSILGLTIDYGPFGFLDDYDPGFIGNHSD 278
Query: 426 LPGRRYCFANQPDIGLWNIAQFSTTLAAAKLIDDKEANYVMERF 469
G RY F NQP + LWN+ + + TL I+ N ++R+
Sbjct: 279 HQG-RYRFDNQPSVALWNLQRLAQTL--TPFIEIDALNRALDRY 319
>sp|Q321G3|YDIU_SHIBS UPF0061 protein YdiU OS=Shigella boydii serotype 4 (strain Sb227)
GN=ydiU PE=3 SV=1
Length = 478
Score = 278 bits (711), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 158/333 (47%), Positives = 204/333 (61%), Gaps = 34/333 (10%)
Query: 126 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVP 185
R+ L YT +SP+ + N +L+ + +A++L + F+ + + G L G P
Sbjct: 10 RDELPETYTALSPTP-LNNARLIWHNIELANTLSIPSSLFK--NGAGVWGGEALLPGMSP 66
Query: 186 YAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRS 245
AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS
Sbjct: 67 LAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRS 126
Query: 246 SIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFG 305
+IRE L SEAMH+LGIPTTRAL +VT+ V R+ EPGA++ RVA S LRFG
Sbjct: 127 TIRESLASEAMHYLGIPTTRALSIVTSDSPVYRE-------TAEPGAMLMRVAPSHLRFG 179
Query: 306 SYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYA 365
++ R + + VR LAD+AIRH++ H+E+ DED KY
Sbjct: 180 HFEHFYYRRES--EKVRQLADFAIRHYWSHLED------------DED---------KYR 216
Query: 366 AWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTD 425
W +V RTASL+AQWQ VGF HGV+NTDNMS+LGLT+DYGPFGFLD ++P F N +D
Sbjct: 217 LWFSDVVARTASLIAQWQTVGFAHGVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSD 276
Query: 426 LPGRRYCFANQPDIGLWNIAQFSTTLAAAKLID 458
G RY F NQP + LWN+ + + TL+ +D
Sbjct: 277 HQG-RYSFDNQPAVALWNLQRLAQTLSPFVAVD 308
>sp|B4T4P0|YDIU_SALNS UPF0061 protein YdiU OS=Salmonella newport (strain SL254) GN=ydiU
PE=3 SV=1
Length = 480
Score = 278 bits (711), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 155/344 (45%), Positives = 207/344 (60%), Gaps = 34/344 (9%)
Query: 126 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVP 185
R+ L A YT + P+ ++N +L+ +++ +A L + F+ + + G T L G P
Sbjct: 10 RDELPATYTALLPTP-LKNARLIWYNDKLAQQLAIPASLFDATNGAGVWGGETLLPGMSP 68
Query: 186 YAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRS 245
AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS
Sbjct: 69 VAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGSTLDWHLKGAGLTPYSRMGDGRAVLRS 128
Query: 246 SIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFG 305
+IRE L SEAMH+LGIPTTRAL +V + V R+ +E GA++ R+AQS +RFG
Sbjct: 129 TIRESLASEAMHYLGIPTTRALSIVASDTPVQRE-------TQETGAMLMRLAQSHMRFG 181
Query: 306 SYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYA 365
++ R + + V+ LAD+AIRH++ +++ + KYA
Sbjct: 182 HFEHFYYR--REPEKVQQLADFAIRHYWPQWQDV---------------------AEKYA 218
Query: 366 AWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTD 425
W EVA RT L+A+WQ VGF HGV+NTDNMSILGLTIDYGPFGFLD +DP F N +D
Sbjct: 219 LWFEEVAARTGRLIAEWQTVGFAHGVMNTDNMSILGLTIDYGPFGFLDDYDPGFIGNHSD 278
Query: 426 LPGRRYCFANQPDIGLWNIAQFSTTLAAAKLIDDKEANYVMERF 469
G RY F NQP + LWN+ + + TL I+ N ++R+
Sbjct: 279 HQG-RYRFDNQPSVALWNLQRLAQTL--TPFIEIDALNRALDRY 319
>sp|B5FJ96|YDIU_SALDC UPF0061 protein YdiU OS=Salmonella dublin (strain CT_02021853)
GN=ydiU PE=3 SV=1
Length = 480
Score = 278 bits (711), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 155/344 (45%), Positives = 207/344 (60%), Gaps = 34/344 (9%)
Query: 126 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVP 185
R+ L A YT + P+ ++N +L+ +++ +A L + F+ + + G T L G P
Sbjct: 10 RDELPATYTALLPTP-LKNARLIWYNDKLAQQLAIPASLFDATNGAGVWGGETLLPGMSP 68
Query: 186 YAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRS 245
AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS
Sbjct: 69 VAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGSTLDWHLKGAGLTPYSRMGDGRAVLRS 128
Query: 246 SIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFG 305
+IRE L SEAMH+LGIPTTRAL +V + V R+ +E GA++ R+AQS +RFG
Sbjct: 129 TIRESLASEAMHYLGIPTTRALSIVASDTPVQRE-------TQETGAMLMRLAQSHMRFG 181
Query: 306 SYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYA 365
++ R + + V+ LAD+AIRH++ +++ + KYA
Sbjct: 182 HFEHFYYR--REPEKVQQLADFAIRHYWPQWQDV---------------------AEKYA 218
Query: 366 AWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTD 425
W EVA RT L+A+WQ VGF HGV+NTDNMSILGLTIDYGPFGFLD +DP F N +D
Sbjct: 219 LWFEEVAARTGRLIAEWQTVGFAHGVMNTDNMSILGLTIDYGPFGFLDDYDPGFIGNHSD 278
Query: 426 LPGRRYCFANQPDIGLWNIAQFSTTLAAAKLIDDKEANYVMERF 469
G RY F NQP + LWN+ + + TL I+ N ++R+
Sbjct: 279 HQG-RYRFDNQPSVALWNLQRLAQTL--TPFIEIDALNRALDRY 319
>sp|A9N229|YDIU_SALPB UPF0061 protein YdiU OS=Salmonella paratyphi B (strain ATCC
BAA-1250 / SPB7) GN=ydiU PE=3 SV=1
Length = 480
Score = 278 bits (710), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 155/344 (45%), Positives = 207/344 (60%), Gaps = 34/344 (9%)
Query: 126 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVP 185
R+ L A YT + P+ ++N +L+ +++ +A L + F+ + + G T L G P
Sbjct: 10 RDELPATYTALLPTP-LKNARLIWYNDKLAQQLAIPASLFDATNGAGVWGGETLLPGMSP 68
Query: 186 YAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRS 245
AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS
Sbjct: 69 VAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGSTLDWHLKGAGLTPYSRMGDGRAVLRS 128
Query: 246 SIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFG 305
+IRE L SEAMH+LGIPTTRAL +V + V R+ +E GA++ R+AQS +RFG
Sbjct: 129 TIRESLASEAMHYLGIPTTRALSIVASDTPVQRE-------TQETGAMLMRLAQSHMRFG 181
Query: 306 SYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYA 365
++ R + + V+ LAD+AIRH++ +++ + KYA
Sbjct: 182 HFEHFYYR--REPEKVQQLADFAIRHYWPQWQDV---------------------AEKYA 218
Query: 366 AWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTD 425
W EVA RT L+A+WQ VGF HGV+NTDNMSILGLTIDYGPFGFLD +DP F N +D
Sbjct: 219 LWFEEVAARTGRLIAEWQTVGFAHGVMNTDNMSILGLTIDYGPFGFLDDYDPGFIGNHSD 278
Query: 426 LPGRRYCFANQPDIGLWNIAQFSTTLAAAKLIDDKEANYVMERF 469
G RY F NQP + LWN+ + + TL I+ N ++R+
Sbjct: 279 HQG-RYRFDNQPSVALWNLQRLAQTL--TPFIEIDALNRALDRY 319
>sp|Q83L33|YDIU_SHIFL UPF0061 protein YdiU OS=Shigella flexneri GN=ydiU PE=3 SV=1
Length = 478
Score = 278 bits (710), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 158/333 (47%), Positives = 204/333 (61%), Gaps = 34/333 (10%)
Query: 126 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVP 185
R+ L YT +SP+ + N +L+ + +A++L + F+ + + G T L G P
Sbjct: 10 RDELPETYTALSPTP-LNNARLIWHNTELANTLSIPSSLFK--NAAGVWGGETLLPGMSP 66
Query: 186 YAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRS 245
AQ Y GHQF +WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS
Sbjct: 67 LAQVYSGHQFVVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRS 126
Query: 246 SIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFG 305
+IRE L SEAMH+LGIPTTRAL +VT+ V R+ EPGA++ RVA S LRFG
Sbjct: 127 TIRESLASEAMHYLGIPTTRALSIVTSDSPVYRETV-------EPGAMLMRVAPSHLRFG 179
Query: 306 SYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYA 365
++ R + + VR LAD+AIRH++ H+E+ DED KY
Sbjct: 180 HFEHFYYRREP--EKVRQLADFAIRHYWSHLED------------DED---------KYR 216
Query: 366 AWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTD 425
W +V RTASL+AQWQ VGF HGV+NTDNMS+LGLT+DYGPFGFLD ++P F N +D
Sbjct: 217 LWFNDVVARTASLIAQWQTVGFAHGVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSD 276
Query: 426 LPGRRYCFANQPDIGLWNIAQFSTTLAAAKLID 458
G RY F NQP + LWN+ + + TL+ +D
Sbjct: 277 HQG-RYSFDNQPAVALWNLQRLAQTLSPFVAVD 308
>sp|C5CNS8|Y2935_VARPS UPF0061 protein Vapar_2935 OS=Variovorax paradoxus (strain S110)
GN=Vapar_2935 PE=3 SV=1
Length = 494
Score = 277 bits (708), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 163/332 (49%), Positives = 203/332 (61%), Gaps = 35/332 (10%)
Query: 131 ACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLF-FSGATPLAGAVPYAQC 189
A T++ P+ + P V SE+ A L L P ++ + + L +G P+AG +P+A
Sbjct: 27 AFLTELRPTPLPDPPYWVGHSEAAARLLGL-PADWRQSEGTLAALTGNLPVAGTLPFATV 85
Query: 190 YGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIRE 249
Y GHQFG+WAGQLGDGRAI LGE E+QLKGAG+TPYSR ADG AVLRSSIRE
Sbjct: 86 YSGHQFGVWAGQLGDGRAIMLGE----TEGGLEVQLKGAGRTPYSRGADGRAVLRSSIRE 141
Query: 250 FLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQI 309
FLCSEAMH LGIPTTRALC+ + V R+M E A+V RVA SF+RFG ++
Sbjct: 142 FLCSEAMHGLGIPTTRALCVTGSDARVYREM-------PETAAVVTRVAPSFIRFGHFE- 193
Query: 310 HASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYAAWAV 369
H S Q D ++ R LADY I ++ + ++ N YAA+
Sbjct: 194 HFSASQRDAEL-RALADYVIDRYYPDCRSTSR-----------------FNGNAYAAFLE 235
Query: 370 EVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTDLPGR 429
V+ERTA+L+AQWQ VGF HGV+NTDNMSILGLTIDYGPF FLD FDP N +D G
Sbjct: 236 AVSERTAALLAQWQAVGFCHGVMNTDNMSILGLTIDYGPFQFLDGFDPRHICNHSDTSG- 294
Query: 430 RYCFANQPDIGLWNIAQFSTTLAAAKLIDDKE 461
RY F QP++ WN+ F A LI D+E
Sbjct: 295 RYAFNQQPNVAYWNL--FCLAQALLPLIGDQE 324
>sp|B4TUG2|YDIU_SALSV UPF0061 protein YdiU OS=Salmonella schwarzengrund (strain CVM19633)
GN=ydiU PE=3 SV=1
Length = 480
Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 156/344 (45%), Positives = 208/344 (60%), Gaps = 34/344 (9%)
Query: 126 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVP 185
R+ L A YT + P+ ++N +L+ +++ +A L + F+ + + G T L G P
Sbjct: 10 RDELPATYTALLPTP-LKNARLIWYNDELAQQLAIPASLFDVTNGAGVWGGETLLPGMSP 68
Query: 186 YAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRS 245
AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS
Sbjct: 69 VAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGSTLDWHLKGAGLTPYSRMGDGRAVLRS 128
Query: 246 SIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFG 305
+IRE L SEAMH+LGIPTTRAL +V + V R+ +E GA++ R+AQS +RFG
Sbjct: 129 TIRESLASEAMHYLGIPTTRALSIVASDTPVQRE-------TQETGAMLMRLAQSHMRFG 181
Query: 306 SYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYA 365
++ R + + V+ LAD+AIRH++ +++ + KYA
Sbjct: 182 HFEHFYYR--REPEKVQQLADFAIRHYWPQWQDVPE---------------------KYA 218
Query: 366 AWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTD 425
W EVA RT L+A+WQ VGF+HGV+NTDNMSILGLTIDYGPFGFLD +DP F N +D
Sbjct: 219 LWFEEVAARTGRLIAEWQTVGFSHGVMNTDNMSILGLTIDYGPFGFLDDYDPGFIGNHSD 278
Query: 426 LPGRRYCFANQPDIGLWNIAQFSTTLAAAKLIDDKEANYVMERF 469
G RY F NQP + LWN+ + + TL ID N ++R+
Sbjct: 279 HQG-RYRFDNQPSVALWNLQRLAQTLTPFIEID--ALNRALDRY 319
>sp|O13890|YE35_SCHPO UPF0061 protein C20G4.05c OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=SPAC20G4.05c PE=3 SV=1
Length = 568
Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 163/385 (42%), Positives = 224/385 (58%), Gaps = 51/385 (13%)
Query: 95 MTKKLKALEDLNWDHSFVRELPGDPRTDSIPR------EVLHA--------CYTKVSPSA 140
M+KKLK DL +F LP DP ++ +LH +T ++PS
Sbjct: 1 MSKKLK---DLPVSSTFTSNLPPDPLVPTVQAMKKADDRILHVPRFVEGGGLFTYLTPSL 57
Query: 141 EVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGA-TPLAGAVPYAQCYGGHQFGMWA 199
+ N QL+A+S S SL L+ E + F G+ + P+AQCYGG+QFG WA
Sbjct: 58 KA-NSQLLAYSPSSVKSLGLEESETQTEAFQQLVVGSNVDVNKCCPWAQCYGGYQFGDWA 116
Query: 200 GQLGDGRAITLGEILNLKS-ERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHF 258
GQLGDGR ++L E+ N ++ +R+E+Q+KGAG+TPYSRFADG AVLRSSIRE+LC EA++
Sbjct: 117 GQLGDGRVVSLCELTNPETGKRFEIQVKGAGRTPYSRFADGKAVLRSSIREYLCCEALYA 176
Query: 259 LGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSYQIHASRGQEDL 318
LGIPTT+AL + V + EP A+VCR+A S++R G++ + Q +
Sbjct: 177 LGIPTTQALAISNLEGVVAQ------RETVEPCAVVCRMAPSWIRIGTFDLQGINNQ--I 228
Query: 319 DIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYAAWAVEVAERTASL 378
+ +R LADY + + F GD T N+Y +VA R A
Sbjct: 229 ESLRKLADYCLNFVLKD----------GFHGGD--------TGNRYEKLLRDVAYRNAKT 270
Query: 379 VAQWQGVGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTDLPGRRYCFANQPD 438
VA+WQ GF +GVLNTDN SILGL+IDYGPFGFLD ++PSFTPN D+ RY + NQPD
Sbjct: 271 VAKWQAYGFMNGVLNTDNTSILGLSIDYGPFGFLDVYNPSFTPNHDDV-FLRYSYRNQPD 329
Query: 439 IGLWNIAQFSTTLA----AAKLIDD 459
I +WN+++ ++ L A +DD
Sbjct: 330 IIIWNLSKLASALVELIGACDKVDD 354
>sp|B5YPZ4|YDIU_ECO5E UPF0061 protein YdiU OS=Escherichia coli O157:H7 (strain EC4115 /
EHEC) GN=ydiU PE=3 SV=1
Length = 478
Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 158/333 (47%), Positives = 204/333 (61%), Gaps = 34/333 (10%)
Query: 126 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVP 185
R+ L YT +SP+ + N +L+ + +A++L + F+ + + G T L G P
Sbjct: 10 RDELPETYTALSPTP-LNNARLIWHNTELANTLSIPSSLFK--NGAGVWGGETLLPGMSP 66
Query: 186 YAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRS 245
AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS
Sbjct: 67 LAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRS 126
Query: 246 SIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFG 305
+IRE L SEAMH+LGIPTTRAL +VT+ V R+ EPGA++ RVA S LRFG
Sbjct: 127 TIRESLASEAMHYLGIPTTRALSIVTSDSPVYRETV-------EPGAMLMRVAPSHLRFG 179
Query: 306 SYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYA 365
++ R + D VR LAD+AIRH++ H+E+ DED KY
Sbjct: 180 HFEHFYYRREP--DKVRQLADFAIRHYWSHLED------------DED---------KYR 216
Query: 366 AWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTD 425
W +V RTASL+AQWQ VGF HGV+NTDNMS+LGLT+DYGPFGFL+ ++P F N +D
Sbjct: 217 LWFNDVVARTASLIAQWQTVGFAHGVMNTDNMSLLGLTLDYGPFGFLNDYEPGFICNHSD 276
Query: 426 LPGRRYCFANQPDIGLWNIAQFSTTLAAAKLID 458
G RY F NQP + LW + + + TL+ +D
Sbjct: 277 HQG-RYSFDNQPAVALWILQRLAQTLSPFVAVD 308
>sp|Q8X5W3|YDIU_ECO57 UPF0061 protein YdiU OS=Escherichia coli O157:H7 GN=ydiU PE=3 SV=1
Length = 478
Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 158/333 (47%), Positives = 204/333 (61%), Gaps = 34/333 (10%)
Query: 126 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVP 185
R+ L YT +SP+ + N +L+ + +A++L + F+ + + G T L G P
Sbjct: 10 RDELPETYTALSPTP-LNNARLIWHNTELANTLSIPSSLFK--NGAGVWGGETLLPGMSP 66
Query: 186 YAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRS 245
AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS
Sbjct: 67 LAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRS 126
Query: 246 SIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFG 305
+IRE L SEAMH+LGIPTTRAL +VT+ V R+ EPGA++ RVA S LRFG
Sbjct: 127 TIRESLASEAMHYLGIPTTRALSIVTSDSPVYRETV-------EPGAMLMRVAPSHLRFG 179
Query: 306 SYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYA 365
++ R + D VR LAD+AIRH++ H+E+ DED KY
Sbjct: 180 HFEHFYYRREP--DKVRQLADFAIRHYWSHLED------------DED---------KYR 216
Query: 366 AWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTD 425
W +V RTASL+AQWQ VGF HGV+NTDNMS+LGLT+DYGPFGFL+ ++P F N +D
Sbjct: 217 LWFNDVVARTASLIAQWQTVGFAHGVMNTDNMSLLGLTLDYGPFGFLNDYEPGFICNHSD 276
Query: 426 LPGRRYCFANQPDIGLWNIAQFSTTLAAAKLID 458
G RY F NQP + LW + + + TL+ +D
Sbjct: 277 HQG-RYSFDNQPAVALWILQRLAQTLSPFVAVD 308
>sp|P77649|YDIU_ECOLI UPF0061 protein YdiU OS=Escherichia coli (strain K12) GN=ydiU PE=3
SV=1
Length = 478
Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/333 (47%), Positives = 203/333 (60%), Gaps = 34/333 (10%)
Query: 126 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVP 185
R+ L YT +SP+ + N +L+ + +A++L + F+ + + G L G P
Sbjct: 10 RDELPETYTALSPTP-LNNARLIWHNTELANTLSIPSSLFK--NGAGVWGGEALLPGMSP 66
Query: 186 YAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRS 245
AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS
Sbjct: 67 LAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRS 126
Query: 246 SIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFG 305
+IRE L SEAMH+LGIPTTRAL +VT+ V R+ EPGA++ RVA S LRFG
Sbjct: 127 TIRESLASEAMHYLGIPTTRALSIVTSDSPVYRE-------TAEPGAMLMRVAPSHLRFG 179
Query: 306 SYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYA 365
++ R + + VR LAD+AIRH++ H+ + DED KY
Sbjct: 180 HFEHFYYRRES--EKVRQLADFAIRHYWSHLAD------------DED---------KYR 216
Query: 366 AWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTD 425
W +V RTASL+AQWQ VGF HGV+NTDNMS+LGLT+DYGPFGFLD ++P F N +D
Sbjct: 217 LWFSDVVARTASLIAQWQTVGFAHGVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSD 276
Query: 426 LPGRRYCFANQPDIGLWNIAQFSTTLAAAKLID 458
G RY F NQP + LWN+ + + TL+ +D
Sbjct: 277 HQG-RYSFDNQPAVALWNLQRLAQTLSPFVAVD 308
>sp|B1XG13|YDIU_ECODH UPF0061 protein YdiU OS=Escherichia coli (strain K12 / DH10B)
GN=ydiU PE=3 SV=1
Length = 478
Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/333 (47%), Positives = 203/333 (60%), Gaps = 34/333 (10%)
Query: 126 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVP 185
R+ L YT +SP+ + N +L+ + +A++L + F+ + + G L G P
Sbjct: 10 RDELPETYTALSPTP-LNNARLIWHNTELANTLSIPSSLFK--NGAGVWGGEALLPGMSP 66
Query: 186 YAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRS 245
AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS
Sbjct: 67 LAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRS 126
Query: 246 SIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFG 305
+IRE L SEAMH+LGIPTTRAL +VT+ V R+ EPGA++ RVA S LRFG
Sbjct: 127 TIRESLASEAMHYLGIPTTRALSIVTSDSPVYRE-------TAEPGAMLMRVAPSHLRFG 179
Query: 306 SYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYA 365
++ R + + VR LAD+AIRH++ H+ + DED KY
Sbjct: 180 HFEHFYYRRES--EKVRQLADFAIRHYWSHLAD------------DED---------KYR 216
Query: 366 AWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTD 425
W +V RTASL+AQWQ VGF HGV+NTDNMS+LGLT+DYGPFGFLD ++P F N +D
Sbjct: 217 LWFSDVVARTASLIAQWQTVGFAHGVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSD 276
Query: 426 LPGRRYCFANQPDIGLWNIAQFSTTLAAAKLID 458
G RY F NQP + LWN+ + + TL+ +D
Sbjct: 277 HQG-RYSFDNQPAVALWNLQRLAQTLSPFVAVD 308
>sp|C4ZYG8|YDIU_ECOBW UPF0061 protein YdiU OS=Escherichia coli (strain K12 / MC4100 /
BW2952) GN=ydiU PE=3 SV=1
Length = 478
Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/333 (47%), Positives = 203/333 (60%), Gaps = 34/333 (10%)
Query: 126 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVP 185
R+ L YT +SP+ + N +L+ + +A++L + F+ + + G L G P
Sbjct: 10 RDELPETYTALSPTP-LNNARLIWHNTELANTLSIPSSLFK--NGAGVWGGEALLPGMSP 66
Query: 186 YAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRS 245
AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS
Sbjct: 67 LAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRS 126
Query: 246 SIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFG 305
+IRE L SEAMH+LGIPTTRAL +VT+ V R+ EPGA++ RVA S LRFG
Sbjct: 127 TIRESLASEAMHYLGIPTTRALSIVTSDSPVYRE-------TAEPGAMLMRVAPSHLRFG 179
Query: 306 SYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYA 365
++ R + + VR LAD+AIRH++ H+ + DED KY
Sbjct: 180 HFEHFYYRRES--EKVRQLADFAIRHYWSHLAD------------DED---------KYR 216
Query: 366 AWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTD 425
W +V RTASL+AQWQ VGF HGV+NTDNMS+LGLT+DYGPFGFLD ++P F N +D
Sbjct: 217 LWFSDVVARTASLIAQWQTVGFAHGVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSD 276
Query: 426 LPGRRYCFANQPDIGLWNIAQFSTTLAAAKLID 458
G RY F NQP + LWN+ + + TL+ +D
Sbjct: 277 HQG-RYSFDNQPAVALWNLQRLAQTLSPFVAVD 308
>sp|B5QVV6|YDIU_SALEP UPF0061 protein YdiU OS=Salmonella enteritidis PT4 (strain P125109)
GN=ydiU PE=3 SV=1
Length = 480
Score = 276 bits (705), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 156/344 (45%), Positives = 207/344 (60%), Gaps = 34/344 (9%)
Query: 126 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVP 185
R+ L A YT + P+ ++N +L+ +++ +A L + F+ + + G T L G P
Sbjct: 10 RDELPATYTALLPTP-LKNARLIWYNDKLAQQLAIPASLFDATNGAGVWGGETLLPGMSP 68
Query: 186 YAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRS 245
AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS
Sbjct: 69 VAQVYSGHQFGVWAGQLGDGRGILLGEQLLAYGSTLDWHLKGAGLTPYSRMGDGRAVLRS 128
Query: 246 SIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFG 305
+IRE L SEAMH+LGIPTTRAL +V + V R+ +E GA++ R+AQS +RFG
Sbjct: 129 TIRESLASEAMHYLGIPTTRALSIVASDTPVQRE-------TQETGAMLMRLAQSHMRFG 181
Query: 306 SYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYA 365
++ R + + V+ LAD+AIRH++ +++ KYA
Sbjct: 182 HFEHFYYR--REPEKVQQLADFAIRHYWPQWQDV---------------------PEKYA 218
Query: 366 AWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTD 425
W EVA RT L+A+WQ VGF+HGV+NTDNMSILGLTIDYGPFGFLD +DP F N +D
Sbjct: 219 LWFEEVAARTGRLIAEWQTVGFSHGVMNTDNMSILGLTIDYGPFGFLDDYDPGFIGNHSD 278
Query: 426 LPGRRYCFANQPDIGLWNIAQFSTTLAAAKLIDDKEANYVMERF 469
G RY F NQP + LWN+ + + TL ID N ++R+
Sbjct: 279 HQG-RYRFDNQPLVALWNLQRLAQTLTPFIEID--ALNRALDRY 319
>sp|B4TGI2|YDIU_SALHS UPF0061 protein YdiU OS=Salmonella heidelberg (strain SL476)
GN=ydiU PE=3 SV=1
Length = 480
Score = 276 bits (705), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 155/344 (45%), Positives = 206/344 (59%), Gaps = 34/344 (9%)
Query: 126 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVP 185
R+ L A YT + P+ ++N +L+ +++ +A L + F+ + + G T L G P
Sbjct: 10 RDELPATYTALLPTP-LKNARLIWYNDKLAQQLAIPASLFDATNGAGVWGGETLLPGMSP 68
Query: 186 YAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRS 245
AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS
Sbjct: 69 VAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGSTLDWHLKGAGLTPYSRMGDGRAVLRS 128
Query: 246 SIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRFG 305
+IRE L SEAMH+LGIPTTRAL +V + V R+ +E GA++ R+AQS +RFG
Sbjct: 129 TIRESLASEAMHYLGIPTTRALSIVASDTPVQRE-------TQETGAMLMRLAQSHMRFG 181
Query: 306 SYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLTSNKYA 365
++ R + + V+ LAD+AIRH++ +++ KYA
Sbjct: 182 HFEHFYYR--REPEKVQQLADFAIRHYWPQWQDV---------------------PEKYA 218
Query: 366 AWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFTPNTTD 425
W EVA RT L+A+WQ VGF+HGV+NTDNMSILGLTIDYGPFGF D +DP F N +D
Sbjct: 219 LWFEEVAARTGRLIAEWQTVGFSHGVMNTDNMSILGLTIDYGPFGFFDDYDPGFIGNHSD 278
Query: 426 LPGRRYCFANQPDIGLWNIAQFSTTLAAAKLIDDKEANYVMERF 469
G RY F NQP + LWN+ + + TL ID N ++R+
Sbjct: 279 HQG-RYRFDNQPSVALWNLQRLAQTLTPFIEID--ALNRALDRY 319
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 183,906,042
Number of Sequences: 539616
Number of extensions: 8032426
Number of successful extensions: 20604
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 260
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 19359
Number of HSP's gapped (non-prelim): 279
length of query: 470
length of database: 191,569,459
effective HSP length: 121
effective length of query: 349
effective length of database: 126,275,923
effective search space: 44070297127
effective search space used: 44070297127
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)