BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012143
(470 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255540413|ref|XP_002511271.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
gi|223550386|gb|EEF51873.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
Length = 650
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 313/401 (78%), Positives = 348/401 (86%), Gaps = 2/401 (0%)
Query: 3 KEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLKT 62
KE D E EGKK+NKLGKCRSR +SK+D++L++G D D DQ G G SS REEKVSSLKT
Sbjct: 81 KEGDTVEFEGKKLNKLGKCRSR-NSKLDASLDYGPDIDADQPGQGPISS-REEKVSSLKT 138
Query: 63 GLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ 122
GLVHVA+KMPKNAHAHF+LGLMYQRLGQP KAV +YEKAEEILLR EA++ARPE LSLVQ
Sbjct: 139 GLVHVAKKMPKNAHAHFILGLMYQRLGQPQKAVFAYEKAEEILLRSEAEVARPEFLSLVQ 198
Query: 123 IHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRL 182
IHHAQC+L E+S DNSLDKELE EELEE+LS++KESMQSD RQA VWNTLGLILLKSGRL
Sbjct: 199 IHHAQCILLENSSDNSLDKELEAEELEEVLSRMKESMQSDVRQAAVWNTLGLILLKSGRL 258
Query: 183 QSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAA 242
QS+ISV SSLLA+D +N DC+GNLGIAY QSGD+E SAKCFQ+LILKDQNHPAA +NYAA
Sbjct: 259 QSAISVWSSLLAMDTSNYDCLGNLGIAYLQSGDLELSAKCFQELILKDQNHPAAFVNYAA 318
Query: 243 LLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLT 302
LLLCKYGSV+AG GAN GEGA + A V+VA ECLLA LK DPKAAH+WANLANAYYLT
Sbjct: 319 LLLCKYGSVVAGPGANAGEGASVYWAEPVHVAMECLLAGLKVDPKAAHLWANLANAYYLT 378
Query: 303 GDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGD 362
GD+RSS KCLEK+AKLEPNCM TRYAVAV RIKDAERSQ+P EQLSWAGNEMASILREG+
Sbjct: 379 GDYRSSSKCLEKSAKLEPNCMCTRYAVAVQRIKDAERSQDPNEQLSWAGNEMASILREGE 438
Query: 363 PVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECA 403
V IE PIAWAG A V K HE+AAAFETE NEL+ +EE A
Sbjct: 439 SVPIEFPIAWAGLAMVHKAQHEIAAAFETERNELADVEERA 479
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/58 (74%), Positives = 47/58 (81%)
Query: 403 AGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 460
A AGE A + A V+VA ECLLA LK DPKAAH+WANLANAYYLTGD+RSS KCLEK
Sbjct: 333 ANAGEGASVYWAEPVHVAMECLLAGLKVDPKAAHLWANLANAYYLTGDYRSSSKCLEK 390
>gi|225456798|ref|XP_002275611.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY [Vitis vinifera]
gi|297733645|emb|CBI14892.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 593 bits (1528), Expect = e-167, Method: Compositional matrix adjust.
Identities = 310/441 (70%), Positives = 360/441 (81%), Gaps = 19/441 (4%)
Query: 1 MSKEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSL 60
+SK+ D+ + EGK++NKLGK RSR++ K++ L++G DAD DQ G G + +SREEKVSSL
Sbjct: 79 VSKDTDMVDGEGKRLNKLGKPRSRVT-KVEYPLDYGADADADQHGQG-APTSREEKVSSL 136
Query: 61 KTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSL 120
KTGLVHVARKMPKNAHAHF+LGLMYQRLGQP KAVS+YEKA EILLRCE +I RPELLSL
Sbjct: 137 KTGLVHVARKMPKNAHAHFILGLMYQRLGQPQKAVSAYEKAAEILLRCEEEIDRPELLSL 196
Query: 121 VQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSG 180
VQIHHAQCLL SSGD+S DKELEPEELEEIL K+K+SMQSD RQA VWNTLGLILL++G
Sbjct: 197 VQIHHAQCLLLGSSGDHSADKELEPEELEEILLKMKDSMQSDIRQAAVWNTLGLILLRTG 256
Query: 181 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 240
RLQ++ISVLSSLL + P+N DC+GNLGIAY +SG++E + KCFQ+LILKDQNHPAALINY
Sbjct: 257 RLQNAISVLSSLLTIAPDNLDCLGNLGIAYLRSGNLELAEKCFQNLILKDQNHPAALINY 316
Query: 241 AALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 300
AA+L+CKYGS++AGAGAN+GEGA DQ A NVAKECLLAA+K +PKAAH+WANLANAYY
Sbjct: 317 AAVLMCKYGSIIAGAGANSGEGASEDQLIAANVAKECLLAAVKVEPKAAHVWANLANAYY 376
Query: 301 LTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILRE 360
L GD RSS KC EKAAKLEPNCMSTRYAVAV +IKDAER Q+P+EQLSWAGNEMASILRE
Sbjct: 377 LMGDCRSSSKCFEKAAKLEPNCMSTRYAVAVHQIKDAERYQDPSEQLSWAGNEMASILRE 436
Query: 361 GDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVA 420
GD IE PIAWAG A V K +E+AAAFETE L +MEE AV++
Sbjct: 437 GDSALIEHPIAWAGLAMVHKIQNEIAAAFETEHKGLMEMEE-------------RAVHIL 483
Query: 421 KECLLAALKADPKAAHIWANL 441
K+ A+ DP A W L
Sbjct: 484 KQ----AIAEDPDDAVQWHQL 500
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 46/58 (79%)
Query: 403 AGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 460
A +GE A DQ A NVAKECLLAA+K +PKAAH+WANLANAYYL GD RSS KC EK
Sbjct: 333 ANSGEGASEDQLIAANVAKECLLAAVKVEPKAAHVWANLANAYYLMGDCRSSSKCFEK 390
>gi|356516597|ref|XP_003526980.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY-like [Glycine
max]
Length = 629
Score = 580 bits (1494), Expect = e-163, Method: Compositional matrix adjust.
Identities = 287/403 (71%), Positives = 336/403 (83%), Gaps = 4/403 (0%)
Query: 1 MSKEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSL 60
+SK+ D E E KK+NKL K RSR K DS+L+F D DGDQ G SS REEKVSS+
Sbjct: 52 LSKDTDSIEAESKKLNKLSKSRSR---KTDSSLDFVADVDGDQHVQGPPSS-REEKVSSV 107
Query: 61 KTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSL 120
KTGLVHVARKMPKNAHAHF+LGLMYQRL QP KAV +YEKAEEILLR EA+I RPELLSL
Sbjct: 108 KTGLVHVARKMPKNAHAHFILGLMYQRLSQPQKAVLAYEKAEEILLRPEAEIDRPELLSL 167
Query: 121 VQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSG 180
VQIHHAQCL+ ESS +NS DKELEP+ELEEILSKLKES++SD RQ VWNTLG ILLK+G
Sbjct: 168 VQIHHAQCLILESSSENSSDKELEPDELEEILSKLKESVKSDIRQTAVWNTLGFILLKTG 227
Query: 181 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 240
R++S++SVLSSLL++ P N DC+GNLGIAY + G++E SAKCFQ+LILKDQNHPAAL+NY
Sbjct: 228 RVKSAVSVLSSLLSIAPENYDCLGNLGIAYLKIGNLELSAKCFQELILKDQNHPAALVNY 287
Query: 241 AALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 300
AALLLCKY SV+AG GA+ EGA DQ + NVAKECLLAA+KAD K+AH+WANLA A+
Sbjct: 288 AALLLCKYASVVAGPGASAAEGAMTDQIMSANVAKECLLAAVKADSKSAHVWANLACAFS 347
Query: 301 LTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILRE 360
++GDHRSS KCLEKAAKLEPNCMSTRYAVA RIK+AERSQ+P+E LS AGNEMASI+R+
Sbjct: 348 ISGDHRSSSKCLEKAAKLEPNCMSTRYAVAFHRIKEAERSQDPSELLSCAGNEMASIIRD 407
Query: 361 GDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECA 403
GD +E PIAW+G A V K HE+AAA+E+E+N L ++EE A
Sbjct: 408 GDSSLVEIPIAWSGLAMVHKAQHEIAAAYESEQNGLREVEERA 450
>gi|224119546|ref|XP_002318101.1| predicted protein [Populus trichocarpa]
gi|222858774|gb|EEE96321.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 289/382 (75%), Positives = 336/382 (87%), Gaps = 2/382 (0%)
Query: 22 RSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLL 81
RSR +SK+D+ L++G D D DQ G SS REE+VSSLKTGL+HVA+KMPKNAHAHF+L
Sbjct: 107 RSR-NSKLDNPLDYGPDNDNDQPNQGPSSY-REERVSSLKTGLLHVAKKMPKNAHAHFIL 164
Query: 82 GLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDK 141
GLMYQRL QP KA+ +YEKAEEILLRCEA++ARP+LLSLVQIHHAQC+L E+SGDNSL+K
Sbjct: 165 GLMYQRLSQPQKAILAYEKAEEILLRCEAEVARPDLLSLVQIHHAQCILLETSGDNSLEK 224
Query: 142 ELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCD 201
ELE +ELE++L KLKESMQSD RQ VWNTLGLILLKSGR+QS++SVLS+L+AVDPNN D
Sbjct: 225 ELEGQELEDVLFKLKESMQSDIRQVAVWNTLGLILLKSGRVQSAVSVLSALMAVDPNNYD 284
Query: 202 CIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGE 261
C+ NLGIA+ QSG++E SAKCFQDLILKDQNHP++L+NYAA+LL KYGSV+AGAGAN G
Sbjct: 285 CLANLGIAFLQSGNLELSAKCFQDLILKDQNHPSSLVNYAAVLLSKYGSVVAGAGANAGV 344
Query: 262 GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
GA +DQA A+NVAKECLLAALK +PKAAHIWANLANAY++ GDHRS+ KCLEKAAKLEPN
Sbjct: 345 GASVDQAEAINVAKECLLAALKLEPKAAHIWANLANAYFMIGDHRSASKCLEKAAKLEPN 404
Query: 322 CMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKT 381
CMSTRYAVAV RIKDAERSQ+P+EQLS AGNEMASILREGD V I+ PIAWAG V K
Sbjct: 405 CMSTRYAVAVHRIKDAERSQDPSEQLSLAGNEMASILREGDSVPIDLPIAWAGLGMVHKA 464
Query: 382 HHEVAAAFETEENELSKMEECA 403
HE+AAAF+TE NEL ++EE A
Sbjct: 465 QHEIAAAFDTESNELMEVEERA 486
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/50 (80%), Positives = 46/50 (92%)
Query: 411 LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 460
+DQA A+NVAKECLLAALK +PKAAHIWANLANAY++ GDHRS+ KCLEK
Sbjct: 348 VDQAEAINVAKECLLAALKLEPKAAHIWANLANAYFMIGDHRSASKCLEK 397
>gi|356507317|ref|XP_003522414.1| PREDICTED: tetratricopeptide repeat protein 37-like [Glycine max]
Length = 644
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 287/403 (71%), Positives = 331/403 (82%), Gaps = 4/403 (0%)
Query: 1 MSKEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSL 60
+SK+ D E E KK+NKL K RSR K DS+L+ D DGDQ G SS REEKVSS+
Sbjct: 67 LSKDTDSIEGESKKLNKLSKSRSR---KTDSSLDCVADVDGDQHVQGPPSS-REEKVSSV 122
Query: 61 KTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSL 120
KTGLVHVARKMPKNAHAHF+LGLMYQRL QP KAV +YEKAEEILLR EA+I RPELLSL
Sbjct: 123 KTGLVHVARKMPKNAHAHFILGLMYQRLSQPQKAVLAYEKAEEILLRPEAEIDRPELLSL 182
Query: 121 VQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSG 180
VQIHHAQCL+ ESS +NS DKELEP ELEEIL KLK+S++SD RQ VWNTLG ILLK+G
Sbjct: 183 VQIHHAQCLILESSSENSSDKELEPHELEEILFKLKQSVRSDIRQTAVWNTLGFILLKTG 242
Query: 181 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 240
R+QS+ISVLSSLL++ P N DC+GNLGIAY Q G++E SAKCFQ+LILKDQNHPAAL+NY
Sbjct: 243 RMQSAISVLSSLLSIAPENYDCLGNLGIAYLQIGNLELSAKCFQELILKDQNHPAALVNY 302
Query: 241 AALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 300
AALLLCKY SV+AG GA EGA DQ A NVAKECLLAA+KAD K+AH+WANLA A+
Sbjct: 303 AALLLCKYASVVAGPGAIAAEGALTDQIMAANVAKECLLAAVKADSKSAHVWANLAYAFS 362
Query: 301 LTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILRE 360
++GDHRSS KCLEKAAKLEPNCMSTRYAVA+ RIK+AERSQ+PTE LS AGNEMASI+R+
Sbjct: 363 ISGDHRSSSKCLEKAAKLEPNCMSTRYAVAIHRIKEAERSQDPTELLSCAGNEMASIIRD 422
Query: 361 GDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECA 403
D +E PI W+G A V K HE+AAA+E+E+N L ++EE A
Sbjct: 423 SDSSLVEIPIVWSGLAMVHKAQHEIAAAYESEQNGLREVEERA 465
>gi|358348985|ref|XP_003638521.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase 110
kDa subunit [Medicago truncatula]
gi|355504456|gb|AES85659.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase 110
kDa subunit [Medicago truncatula]
Length = 652
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 288/403 (71%), Positives = 338/403 (83%), Gaps = 2/403 (0%)
Query: 1 MSKEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSL 60
+SK+ + E EGK +NKLGKCRS+ SK DS+++ G DADGDQ G + S+REEKVSS+
Sbjct: 73 LSKDTNSNEGEGKLLNKLGKCRSK-PSKTDSSIDCGADADGDQHVQG-APSAREEKVSSM 130
Query: 61 KTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSL 120
KTGLVHVARKMPKNAHAHF+LGLMYQRL QP KA+ +YEKAEEILLR E +I R E L+L
Sbjct: 131 KTGLVHVARKMPKNAHAHFILGLMYQRLNQPQKAILAYEKAEEILLRPEVEIDRAEFLAL 190
Query: 121 VQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSG 180
VQIHHAQCL+ ESS +NS D+ELEP ELEEI+SKLKES QSD RQA VWNTLG ILLK+G
Sbjct: 191 VQIHHAQCLIIESSSENSSDQELEPHELEEIISKLKESTQSDIRQAAVWNTLGFILLKTG 250
Query: 181 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 240
R+QS+ISVLSSLLA+ P N DC+GNLGIAY Q GD+E SAKCFQ+LILKDQNHPAAL+NY
Sbjct: 251 RVQSAISVLSSLLAISPENYDCLGNLGIAYLQIGDLELSAKCFQELILKDQNHPAALVNY 310
Query: 241 AALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 300
AALLLCK SV+AGAGAN EGA +Q+ A NVAKECLLAA+KAD K+AHIWANLA A+
Sbjct: 311 AALLLCKNASVVAGAGANAAEGASAEQSMAANVAKECLLAAIKADGKSAHIWANLAYAFS 370
Query: 301 LTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILRE 360
+TG+HR S KCLEKAAKLEPNCMSTRYAVA RIK+AERSQ+P+E LS AGNEMASI+R+
Sbjct: 371 ITGNHRISSKCLEKAAKLEPNCMSTRYAVASHRIKEAERSQDPSELLSSAGNEMASIIRD 430
Query: 361 GDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECA 403
GD +E PIAWAG A V K HE++AA+E+E++ L ++EECA
Sbjct: 431 GDSSLVELPIAWAGLAMVHKAQHEISAAYESEQDGLKEIEECA 473
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 42/49 (85%)
Query: 412 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 460
+Q+ A NVAKECLLAA+KAD K+AHIWANLA A+ +TG+HR S KCLEK
Sbjct: 336 EQSMAANVAKECLLAAIKADGKSAHIWANLAYAFSITGNHRISSKCLEK 384
>gi|51969340|dbj|BAD43362.1| unknown protein [Arabidopsis thaliana]
Length = 649
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 294/479 (61%), Positives = 364/479 (75%), Gaps = 20/479 (4%)
Query: 3 KEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLKT 62
KE++ EVE KKI+K+GKCRSR SK++S+ + GVDADGD + G +S REEK+S+LK
Sbjct: 71 KEVEPGEVEAKKISKVGKCRSR--SKIESSSDCGVDADGDLANQGVPAS-REEKISNLKM 127
Query: 63 GLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ 122
GL+HVARKMPKNAHAHF+LGLM+QRLGQ KA+ YEKAEEILL CE +IARPELL LVQ
Sbjct: 128 GLIHVARKMPKNAHAHFILGLMFQRLGQSQKAIPEYEKAEEILLGCEPEIARPELLLLVQ 187
Query: 123 IHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRL 182
IHH QCLL + GD KELE EELEEILSKLK+S++ D RQA VWNTLGL+LLK+GRL
Sbjct: 188 IHHGQCLLLDGFGDTDSVKELEGEELEEILSKLKDSIKLDVRQAAVWNTLGLMLLKAGRL 247
Query: 183 QSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAA 242
S+ISVLSSLLA+ P+N DC+ NLG+AY QSGDME SAKCFQDL+LKD NHPAALINYAA
Sbjct: 248 MSAISVLSSLLALVPDNYDCLANLGVAYLQSGDMELSAKCFQDLVLKDHNHPAALINYAA 307
Query: 243 LLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLT 302
LLCK+ S +AGAGAN G A DQ + +NVAKECLLAAL++DPK+AH W NLAN+YY+
Sbjct: 308 ELLCKHSSTVAGAGANGGADASEDQKAPMNVAKECLLAALRSDPKSAHAWVNLANSYYMM 367
Query: 303 GDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGD 362
GDHRSS KCLEKAAKL+PNCM+TR+AVAV RIKDAERSQ+ ++QLSWAGNEMAS++REG+
Sbjct: 368 GDHRSSSKCLEKAAKLDPNCMATRFAVAVQRIKDAERSQDASDQLSWAGNEMASVIREGE 427
Query: 363 PVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECA--GAGESAFLDQASAVN-- 418
V I+PPIAWAG A K HE+AAAF + NEL++MEE A ++ D AV
Sbjct: 428 SVPIDPPIAWAGLAMAHKAQHEIAAAFVADRNELTEMEERAVYSLKQAVTEDPEDAVRWH 487
Query: 419 -------------VAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
++++ L AA+ + ++ W+NL + L+ +H + + ++ L V
Sbjct: 488 QLGLHSLCSQQYKLSQKYLKAAVGRSRECSYAWSNLGISLQLSDEHSEAEEVYKRALTV 546
>gi|297793915|ref|XP_002864842.1| tetratricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310677|gb|EFH41101.1| tetratricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 650
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 289/479 (60%), Positives = 362/479 (75%), Gaps = 20/479 (4%)
Query: 3 KEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLKT 62
K+++ EVE KKI+K+GKCRSR SK++ + + G+DADGDQ+ G +S REEK+S+LK
Sbjct: 72 KDVEPGEVEAKKISKVGKCRSR--SKIEPSSDCGLDADGDQANQGVPAS-REEKISNLKM 128
Query: 63 GLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ 122
GL+HVARKMPKNAHAHF+LGLM+QRLGQP KA+ YEKAEEILL CE +IARPELL LVQ
Sbjct: 129 GLIHVARKMPKNAHAHFILGLMFQRLGQPQKAIPEYEKAEEILLGCEPEIARPELLLLVQ 188
Query: 123 IHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRL 182
IHH QCLL + GD KELE EELEEILSKLK+S++ D RQA VWNTLGL+LLK+G L
Sbjct: 189 IHHGQCLLLDGFGDTDSVKELEGEELEEILSKLKDSIKLDVRQAAVWNTLGLMLLKAGCL 248
Query: 183 QSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAA 242
S++SVLSSLLA+ P+N DC+ NLG+AY QSGDME SAKCFQDL+LKD NHPAALINYAA
Sbjct: 249 MSAVSVLSSLLALVPDNYDCLANLGVAYLQSGDMELSAKCFQDLVLKDHNHPAALINYAA 308
Query: 243 LLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLT 302
LLCK+ S +AGAGAN G DQ + +NVAKECLLAAL++DPK+AH W NLAN+YY+
Sbjct: 309 ELLCKHSSTVAGAGANGGADTSEDQKAPMNVAKECLLAALRSDPKSAHAWVNLANSYYMM 368
Query: 303 GDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGD 362
GDHRSS KCLEKAAKL+PNCM+TR+AVAV RIKDAERSQ ++QLSWAGNEMAS++REG+
Sbjct: 369 GDHRSSSKCLEKAAKLDPNCMATRFAVAVQRIKDAERSQNASDQLSWAGNEMASVIREGE 428
Query: 363 PVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECA--GAGESAFLDQASAVN-- 418
V I+PPIAWAG A K HE+AAAF + NEL++MEE A ++ D AV
Sbjct: 429 SVPIDPPIAWAGLAMAHKAQHEIAAAFVADRNELTEMEERAVYSLKQAVTEDPEDAVRWH 488
Query: 419 -------------VAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
++++ + AA+ + ++ W+NL + L+ +H + + ++ L V
Sbjct: 489 QLGLHSLCSQQYKLSQKYIKAAVGRSRECSYAWSNLGISLQLSDEHSEAEEVYKRALAV 547
>gi|30697806|ref|NP_201125.2| tetratricopeptide repeat (TPR)-containing protein [Arabidopsis
thaliana]
gi|51971054|dbj|BAD44219.1| unknown protein [Arabidopsis thaliana]
gi|51971080|dbj|BAD44232.1| unknown protein [Arabidopsis thaliana]
gi|332010335|gb|AED97718.1| tetratricopeptide repeat (TPR)-containing protein [Arabidopsis
thaliana]
Length = 649
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 293/479 (61%), Positives = 363/479 (75%), Gaps = 20/479 (4%)
Query: 3 KEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLKT 62
KE++ EVE KKI+K+GKCRSR SK++S+ + GVDADGD + G +S REEK+S+LK
Sbjct: 71 KEVEPGEVEAKKISKVGKCRSR--SKIESSSDCGVDADGDLANQGVPAS-REEKISNLKM 127
Query: 63 GLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ 122
GL+HVARKMPKNAHAHF+LGLM+QRLGQ KA+ YEKAEEILL CE +IARPELL LVQ
Sbjct: 128 GLIHVARKMPKNAHAHFILGLMFQRLGQSQKAIPEYEKAEEILLGCEPEIARPELLLLVQ 187
Query: 123 IHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRL 182
IHH QCLL + GD KELE EELEEILSKLK+S++ D RQA VWNTLGL+LLK+G L
Sbjct: 188 IHHGQCLLLDGFGDTDSVKELEGEELEEILSKLKDSIKLDVRQAAVWNTLGLMLLKAGCL 247
Query: 183 QSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAA 242
S+ISVLSSLLA+ P+N DC+ NLG+AY QSGDME SAKCFQDL+LKD NHPAALINYAA
Sbjct: 248 MSAISVLSSLLALVPDNYDCLANLGVAYLQSGDMELSAKCFQDLVLKDHNHPAALINYAA 307
Query: 243 LLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLT 302
LLCK+ S +AGAGAN G A DQ + +NVAKECLLAAL++DPK+AH W NLAN+YY+
Sbjct: 308 ELLCKHSSTVAGAGANGGADASEDQKAPMNVAKECLLAALRSDPKSAHAWVNLANSYYMM 367
Query: 303 GDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGD 362
GDHRSS KCLEKAAKL+PNCM+TR+AVAV RIKDAERSQ+ ++QLSWAGNEMAS++REG+
Sbjct: 368 GDHRSSSKCLEKAAKLDPNCMATRFAVAVQRIKDAERSQDASDQLSWAGNEMASVIREGE 427
Query: 363 PVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECA--GAGESAFLDQASAVN-- 418
V I+PPIAWAG A K HE+AAAF + NEL++MEE A ++ D AV
Sbjct: 428 SVPIDPPIAWAGLAMAHKAQHEIAAAFVADRNELTEMEERAVYSLKQAVTEDPEDAVRWH 487
Query: 419 -------------VAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
++++ L AA+ + ++ W+NL + L+ +H + + ++ L V
Sbjct: 488 QLGLHSLCSQQYKLSQKYLKAAVGRSRECSYAWSNLGISLQLSDEHSEAEEVYKRALTV 546
>gi|449469594|ref|XP_004152504.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY-like [Cucumis
sativus]
Length = 647
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 276/401 (68%), Positives = 336/401 (83%), Gaps = 2/401 (0%)
Query: 3 KEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLKT 62
K+ + EVEG++++K+GKCRSR ++K++ +L+ D DGDQ G G S+S REEKVSSLKT
Sbjct: 70 KDTNAMEVEGRRVSKIGKCRSR-NNKVEYSLDSAADPDGDQHGQGVSTS-REEKVSSLKT 127
Query: 63 GLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ 122
GLVHVARKMPKNAHAHF+LGLMYQRLGQP KAV +YEKAEEILL+ + +I RPE LSL+Q
Sbjct: 128 GLVHVARKMPKNAHAHFILGLMYQRLGQPQKAVLAYEKAEEILLQSDVEIHRPEFLSLIQ 187
Query: 123 IHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRL 182
IHHAQCLL ES GDN+ ++ELE EEL+++ SKLK SMQSD RQA VWNTLGL+LL +GR+
Sbjct: 188 IHHAQCLLLESVGDNTSNEELEQEELDDVCSKLKHSMQSDVRQAAVWNTLGLLLLTTGRV 247
Query: 183 QSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAA 242
+S+I+VLSSLLA+ PNNCDC+GNLGIAY QSG+ME S KCFQ+LIL DQNH AAL+ YAA
Sbjct: 248 KSAITVLSSLLAIVPNNCDCLGNLGIAYLQSGNMELSEKCFQELILTDQNHLAALVYYAA 307
Query: 243 LLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLT 302
LLCKYGS + GAGAN GEG ++ +NVAKECLLAALK DPKAAH WANLANAY++T
Sbjct: 308 FLLCKYGSTVVGAGANAGEGGVDEKVVGMNVAKECLLAALKVDPKAAHAWANLANAYFVT 367
Query: 303 GDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGD 362
GDHRSS KCLEK AKLEPNCMS RYAVA+ R+KDAERSQ+ +EQLSWAGNEMAS++R+GD
Sbjct: 368 GDHRSSAKCLEKGAKLEPNCMSMRYAVAMHRLKDAERSQDRSEQLSWAGNEMASVIRDGD 427
Query: 363 PVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECA 403
+ I+ +AWAGF+ V K HE+AA F T+++EL + E+ A
Sbjct: 428 GLTIDHSVAWAGFSMVHKIQHEIAAGFRTDQSELREKEDHA 468
>gi|388504348|gb|AFK40240.1| unknown [Medicago truncatula]
Length = 453
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 275/374 (73%), Positives = 317/374 (84%), Gaps = 2/374 (0%)
Query: 1 MSKEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSL 60
+SK+ + E EGK +NKLGKCRS+ SK DS+++ G DADGDQ G + S+REEKVSS+
Sbjct: 73 LSKDTNSNEGEGKLLNKLGKCRSK-PSKADSSIDCGADADGDQHVQG-APSAREEKVSSM 130
Query: 61 KTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSL 120
KTGLVHVARKMPKNAHAHF+LGLMYQRL QP KA+ +YEKAEEILLR E +I R E L+L
Sbjct: 131 KTGLVHVARKMPKNAHAHFILGLMYQRLNQPQKAILAYEKAEEILLRPEVEIDRAEFLAL 190
Query: 121 VQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSG 180
VQIHHAQCL+ ESS +NS D+ELEP ELEEI+SKLKES QSDTRQA VWNTLG ILLK+G
Sbjct: 191 VQIHHAQCLIIESSSENSSDQELEPHELEEIISKLKESTQSDTRQAAVWNTLGFILLKTG 250
Query: 181 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 240
R+QS+ISVLSSLLA+ P N DC+GNLGIAY Q GD+E SAKCFQ+LILKDQNHPAAL+NY
Sbjct: 251 RVQSAISVLSSLLAISPENYDCLGNLGIAYLQIGDLELSAKCFQELILKDQNHPAALVNY 310
Query: 241 AALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 300
AALLLCK SV+AGAGAN EGA +Q+ A NVAKECLLAA+KAD K+AHIWANLA A+
Sbjct: 311 AALLLCKNASVVAGAGANAAEGASAEQSMAANVAKECLLAAIKADGKSAHIWANLAYAFS 370
Query: 301 LTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILRE 360
+TG+HR S KCLEKAAKLEPNCMSTRYAVA RIK+AERSQ+P+E LS AGNEMASI+R+
Sbjct: 371 ITGNHRISSKCLEKAAKLEPNCMSTRYAVASHRIKEAERSQDPSELLSSAGNEMASIIRD 430
Query: 361 GDPVQIEPPIAWAG 374
GD +E PIAWAG
Sbjct: 431 GDSSLVELPIAWAG 444
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 42/49 (85%)
Query: 412 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 460
+Q+ A NVAKECLLAA+KAD K+AHIWANLA A+ +TG+HR S KCLEK
Sbjct: 336 EQSMAANVAKECLLAAIKADGKSAHIWANLAYAFSITGNHRISSKCLEK 384
>gi|217075008|gb|ACJ85864.1| unknown [Medicago truncatula]
Length = 439
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 270/369 (73%), Positives = 312/369 (84%), Gaps = 2/369 (0%)
Query: 1 MSKEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSL 60
+SK+ + E EGK +NKLGKCRS+ SK DS+++ G DADGDQ G + S+REEKVSS+
Sbjct: 73 LSKDTNSNEGEGKLLNKLGKCRSK-PSKADSSIDCGADADGDQHVQG-APSAREEKVSSM 130
Query: 61 KTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSL 120
KTGLVHVARKMPKNAHAHF+LGLMYQRL QP KA+ +YEKAEEILLR E +I R E L+L
Sbjct: 131 KTGLVHVARKMPKNAHAHFILGLMYQRLNQPQKAILAYEKAEEILLRPEVEIDRAEFLAL 190
Query: 121 VQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSG 180
VQIHHAQCL+ ESS +NS D+ELEP ELEEI+SKLKES QSDTRQA VWNTLG ILLK+G
Sbjct: 191 VQIHHAQCLIIESSSENSSDQELEPHELEEIISKLKESTQSDTRQAAVWNTLGFILLKTG 250
Query: 181 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 240
R+QS+ISVLSSLLA+ P N DC+GNLGIAY Q GD+E SAKCFQ+LILKDQNHPAAL+NY
Sbjct: 251 RVQSAISVLSSLLAISPENYDCLGNLGIAYLQIGDLELSAKCFQELILKDQNHPAALVNY 310
Query: 241 AALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 300
AALLLCK SV+AGAGAN EGA +Q+ A NVAKECLLAA+KAD K+AHIWANLA A+
Sbjct: 311 AALLLCKNASVVAGAGANAAEGASAEQSMAANVAKECLLAAIKADGKSAHIWANLAYAFS 370
Query: 301 LTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILRE 360
+TG+HR S KCLEKAAKLEPNCMSTRYAVA RIK+AERSQ+P+E LS AGNEMASI+R+
Sbjct: 371 ITGNHRISSKCLEKAAKLEPNCMSTRYAVASHRIKEAERSQDPSELLSSAGNEMASIIRD 430
Query: 361 GDPVQIEPP 369
GD +E P
Sbjct: 431 GDSSLVELP 439
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 42/49 (85%)
Query: 412 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 460
+Q+ A NVAKECLLAA+KAD K+AHIWANLA A+ +TG+HR S KCLEK
Sbjct: 336 EQSMAANVAKECLLAAIKADGKSAHIWANLAYAFSITGNHRISSKCLEK 384
>gi|115441709|ref|NP_001045134.1| Os01g0906600 [Oryza sativa Japonica Group]
gi|56785099|dbj|BAD82737.1| unknown protein [Oryza sativa Japonica Group]
gi|113534665|dbj|BAF07048.1| Os01g0906600 [Oryza sativa Japonica Group]
gi|215704783|dbj|BAG94811.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189568|gb|EEC71995.1| hypothetical protein OsI_04846 [Oryza sativa Indica Group]
Length = 599
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 247/446 (55%), Positives = 320/446 (71%), Gaps = 21/446 (4%)
Query: 40 DGDQSGLGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYE 99
D DQ G +S +REEKVS+LK LVHVARKMPKNAHAHF+LGLMYQRLGQP KA+++YE
Sbjct: 70 DADQHCQG-ASVAREEKVSNLKAALVHVARKMPKNAHAHFMLGLMYQRLGQPQKAIAAYE 128
Query: 100 KAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESM 159
K+ EILL+ E ++ RP+LLS V+IHHAQC+L S GD + D+ELE EL+EIL K+K S+
Sbjct: 129 KSSEILLQDEEEVRRPDLLSSVRIHHAQCILQTSMGD-TFDEELESGELDEILVKMKSSV 187
Query: 160 QSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 219
+SD RQA VWN LGL+LL+SG+LQS+ISVLSSL V P+ D + NLG+AY QSG++E +
Sbjct: 188 ESDPRQAAVWNILGLVLLRSGQLQSAISVLSSLTVVAPDYLDSLANLGVAYIQSGNLELA 247
Query: 220 AKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLL 279
KCFQ+L++KDQNHPAAL+NYAALLLCKYGS AG+G N G+CL Q + VAKECLL
Sbjct: 248 TKCFQELVIKDQNHPAALVNYAALLLCKYGSFAAGSGGNVSAGSCLHQKEGLAVAKECLL 307
Query: 280 AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAER 339
AA+KADPKAA +W NLANAYY+ G+HR+S +CLE+AAK EP+ M RYA+AV RI+DA R
Sbjct: 308 AAVKADPKAASVWVNLANAYYMAGEHRNSKRCLEQAAKHEPSHMPARYAIAVHRIRDAVR 367
Query: 340 SQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKM 399
SQ +QL WA NEMA++L+EGDP ++ PIAWAG A + HE+AAA++TE+ LS +
Sbjct: 368 SQCSDDQLLWASNEMATVLKEGDPSAVDAPIAWAGLAMAHRAQHEIAAAYDTEQINLSDV 427
Query: 400 EECA----------GAGESAFLDQASAVNV-------AKECLLAALKADPKAAHIWANLA 442
EE A ++ Q N+ + L AA+ P +++W+NL
Sbjct: 428 EERALYTLKQAIQEDPDDAVQWHQLGLYNICTTQFSRSVNFLKAAVARSPDCSYVWSNLG 487
Query: 443 NAYYLTGDHRSSGKCLEKVLMVYCSS 468
A L+ D SS + + K ++ SS
Sbjct: 488 IALQLSDD--SSCETVYKRALILSSS 511
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 20/172 (11%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
E L LK+++Q D AV W+ LGL + + + S++ L + +A P+ NLGI
Sbjct: 429 ERALYTLKQAIQEDPDDAVQWHQLGLYNICTTQFSRSVNFLKAAVARSPDCSYVWSNLGI 488
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
A S D + LIL A+++ +L ++G
Sbjct: 489 ALQLSDDSSCETVYKRALILSSSQQSYAILSNLGILYRQHGR------------------ 530
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
+A+ LL +L+ P A NL G + + C EK+ + +P
Sbjct: 531 --YELARRMLLRSLELCPGHAPANNNLGLVSIAEGRYEEAISCFEKSLQSDP 580
>gi|15146191|gb|AAK83579.1| AT5g63200/MDC12_17 [Arabidopsis thaliana]
gi|27764942|gb|AAO23592.1| At5g63200/MDC12_17 [Arabidopsis thaliana]
Length = 523
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 259/419 (61%), Positives = 317/419 (75%), Gaps = 17/419 (4%)
Query: 63 GLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ 122
GL+HVARKMPKNAHAHF+LGLM+QRLGQ KA+ YEKAEEILL CE +IARPELL LVQ
Sbjct: 2 GLIHVARKMPKNAHAHFILGLMFQRLGQSQKAIPEYEKAEEILLGCEPEIARPELLLLVQ 61
Query: 123 IHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRL 182
IHH QCLL + GD KELE EELEEILSKLK+S++ D RQA VWNTLGL+LLK+G L
Sbjct: 62 IHHGQCLLLDGFGDTDSVKELEGEELEEILSKLKDSIKLDVRQAAVWNTLGLMLLKAGCL 121
Query: 183 QSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAA 242
S+ISVLSSLLA+ P+N DC+ NLG+AY QSGDME SAKCFQDL+LKD NHPAALINYAA
Sbjct: 122 MSAISVLSSLLALVPDNYDCLANLGVAYLQSGDMELSAKCFQDLVLKDHNHPAALINYAA 181
Query: 243 LLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLT 302
LLCK+ S +AGAGAN G A DQ + +NVAKECLLAAL++DPK+AH W NLAN+YY+
Sbjct: 182 ELLCKHSSTVAGAGANGGADASEDQKAPMNVAKECLLAALRSDPKSAHAWVNLANSYYMM 241
Query: 303 GDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGD 362
GDHRSS KCLEKAAKL+PNCM+TR+AVAV RIKDAERSQ+ ++QLSWAGNEMAS++REG+
Sbjct: 242 GDHRSSSKCLEKAAKLDPNCMATRFAVAVQRIKDAERSQDASDQLSWAGNEMASVIREGE 301
Query: 363 PVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECA--GAGESAFLDQASAVN-- 418
V I+PPIAWAG A K HE+AAAF + NEL++MEE A ++ D AV
Sbjct: 302 SVPIDPPIAWAGLAMAHKAQHEIAAAFVADRNELTEMEERAVYSLKQAVTEDPEDAVRWH 361
Query: 419 -------------VAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
++++ L AA+ + ++ W+NL + L+ +H + + ++ L V
Sbjct: 362 QLGLHSLCSQQYKLSQKYLKAAVGRSRECSYAWSNLGISLQLSDEHSEAEEVYKRALTV 420
>gi|242059603|ref|XP_002458947.1| hypothetical protein SORBIDRAFT_03g043170 [Sorghum bicolor]
gi|241930922|gb|EES04067.1| hypothetical protein SORBIDRAFT_03g043170 [Sorghum bicolor]
Length = 612
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 244/428 (57%), Positives = 308/428 (71%), Gaps = 19/428 (4%)
Query: 40 DGDQSGLGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYE 99
D DQ G +S+ REEKVS+LK LVHVARKMPKNAHAHF+LGLMYQRLGQ KA++SYE
Sbjct: 83 DADQHCQG-ASAPREEKVSNLKAALVHVARKMPKNAHAHFMLGLMYQRLGQAQKAIASYE 141
Query: 100 KAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESM 159
K+ EILL+ E ++ RP+LLS V+IHHAQC+L S GD S D+ELE E+++IL+KLK S+
Sbjct: 142 KSTEILLQDEEEVRRPDLLSSVRIHHAQCILQASMGD-SFDEELETGEVDDILAKLKSSV 200
Query: 160 QSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 219
+SD RQA VWN LGL+LL+ G++QS+ISVLSSL AV P+ D + NLG+AY QSGD+E S
Sbjct: 201 ESDHRQAAVWNILGLVLLRGGQIQSAISVLSSLTAVAPDYLDSLANLGVAYIQSGDLEMS 260
Query: 220 AKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLL 279
AKCFQ+L+LKDQNHPAAL+NYA LLLC+YGS+ AGAG N G L Q A+ VAKECLL
Sbjct: 261 AKCFQELLLKDQNHPAALVNYAVLLLCRYGSLSAGAGGNVSTGPYLHQKEALVVAKECLL 320
Query: 280 AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAER 339
AA+KADP+AA +W NLANAYY+ G+HR+S +CLE+AAKLEPN M RYA+AV RI+DA R
Sbjct: 321 AAVKADPRAASVWVNLANAYYMDGEHRNSKRCLEQAAKLEPNHMPARYAIAVHRIRDAVR 380
Query: 340 SQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKM 399
SQ +QL WA NEMA++L+EGDP ++ PIAWAG A + HE+AAA++ E L+
Sbjct: 381 SQCSDDQLLWAANEMATVLKEGDPSAVDAPIAWAGLAMAHRAQHEIAAAYDNENINLNDA 440
Query: 400 EECA----------GAGESAFLDQASAVNV-------AKECLLAALKADPKAAHIWANLA 442
EE A ++ Q N+ + L AAL P ++ W+NL
Sbjct: 441 EERAQYTLKQAIQEDPDDAVQWHQLGLYNICMTRFSRSVNFLKAALARSPDCSYAWSNLG 500
Query: 443 NAYYLTGD 450
A L+ D
Sbjct: 501 IALQLSDD 508
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 48/62 (77%), Gaps = 4/62 (6%)
Query: 403 AGAGESA----FLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 458
AGAG + +L Q A+ VAKECLLAA+KADP+AA +W NLANAYY+ G+HR+S +CL
Sbjct: 294 AGAGGNVSTGPYLHQKEALVVAKECLLAAVKADPRAASVWVNLANAYYMDGEHRNSKRCL 353
Query: 459 EK 460
E+
Sbjct: 354 EQ 355
>gi|222619718|gb|EEE55850.1| hypothetical protein OsJ_04469 [Oryza sativa Japonica Group]
Length = 618
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/419 (57%), Positives = 307/419 (73%), Gaps = 19/419 (4%)
Query: 40 DGDQSGLGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYE 99
D DQ G +S +REEKVS+LK LVHVARKMPKNAHAHF+LGLMYQRLGQP KA+++YE
Sbjct: 70 DADQHCQG-ASVAREEKVSNLKAALVHVARKMPKNAHAHFMLGLMYQRLGQPQKAIAAYE 128
Query: 100 KAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESM 159
K+ EILL+ E ++ RP+LLS V+IHHAQC+L S GD + D+ELE EL+EIL K+K S+
Sbjct: 129 KSSEILLQDEEEVRRPDLLSSVRIHHAQCILQTSMGD-TFDEELESGELDEILVKMKSSV 187
Query: 160 QSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 219
+SD RQA VWN LGL+LL+SG+LQS+ISVLSSL V P+ D + NLG+AY QSG++E +
Sbjct: 188 ESDPRQAAVWNILGLVLLRSGQLQSAISVLSSLTVVAPDYLDSLANLGVAYIQSGNLELA 247
Query: 220 AKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLL 279
KCFQ+L++KDQNHPAAL+NYAALLLCKYGS AG+G N G+CL Q + VAKECLL
Sbjct: 248 TKCFQELVIKDQNHPAALVNYAALLLCKYGSFAAGSGGNVSAGSCLHQKEGLAVAKECLL 307
Query: 280 AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAER 339
AA+KADPKAA +W NLANAYY+ G+HR+S +CLE+AAK EP+ M RYA+AV RI+DA R
Sbjct: 308 AAVKADPKAASVWVNLANAYYMAGEHRNSKRCLEQAAKHEPSHMPARYAIAVHRIRDAVR 367
Query: 340 SQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKM 399
SQ +QL WA NEMA++L+EGDP ++ PIAWAG A + HE+AAA++TE+ LS +
Sbjct: 368 SQCSDDQLLWASNEMATVLKEGDPSAVDAPIAWAGLAMAHRAQHEIAAAYDTEQINLSDV 427
Query: 400 EECA----------GAGESAFLDQASAVNV-------AKECLLAALKADPKAAHIWANL 441
EE A ++ Q N+ + L AA+ P +++W+NL
Sbjct: 428 EERALYTLKQAIQEDPDDAVQWHQLGLYNICTTQFSRSVNFLKAAVARSPDCSYVWSNL 486
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 41/50 (82%)
Query: 411 LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 460
L Q + VAKECLLAA+KADPKAA +W NLANAYY+ G+HR+S +CLE+
Sbjct: 293 LHQKEGLAVAKECLLAAVKADPKAASVWVNLANAYYMAGEHRNSKRCLEQ 342
>gi|308080217|ref|NP_001183500.1| uncharacterized protein LOC100501933 [Zea mays]
gi|238011876|gb|ACR36973.1| unknown [Zea mays]
gi|414879127|tpg|DAA56258.1| TPA: hypothetical protein ZEAMMB73_120592 [Zea mays]
Length = 610
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 250/469 (53%), Positives = 324/469 (69%), Gaps = 23/469 (4%)
Query: 19 GKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLKTGLVHVARKMPKNAHAH 78
G ++ I++K +E D DQ G +S+ REEKVS+LK LVHVARKMPKNAHAH
Sbjct: 63 GLTKTVITTKDTDTVEC---EDVDQHCQG-ASAPREEKVSNLKAALVHVARKMPKNAHAH 118
Query: 79 FLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNS 138
F+LGLMYQRLGQ KA++SYEK+ EILL+ E ++ RP+LLS V+IHHAQC+L S GD S
Sbjct: 119 FMLGLMYQRLGQAQKAIASYEKSTEILLQDEEEVRRPDLLSSVRIHHAQCILQASMGD-S 177
Query: 139 LDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPN 198
D+ELE EL++ILSKLK S++ D RQA VWN LGL+LL+ G++QS+ISVLSSL AV P+
Sbjct: 178 FDEELETGELDDILSKLKSSVELDHRQAAVWNILGLVLLRGGQIQSAISVLSSLTAVAPD 237
Query: 199 NCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGAN 258
D + NLG+AY QSG +E SAKCFQ+L+LKDQNHPAAL+NYA LLLC+YGS+ AGAG N
Sbjct: 238 YLDSLANLGVAYIQSGKLELSAKCFQELLLKDQNHPAALVNYAVLLLCRYGSLSAGAGGN 297
Query: 259 TGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 318
G + Q A+ VAKECLLAA+KADP+AA +W NLANAYY+ G+H++S +CLE+AAKL
Sbjct: 298 VSTGPYVHQKEALVVAKECLLAAVKADPRAASVWVNLANAYYMDGEHKNSKRCLEQAAKL 357
Query: 319 EPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAV 378
EPN M RYA+AV RI+DA RSQ +QL WA NEMA++L+EGDP ++ PIAWAG A
Sbjct: 358 EPNHMPARYAIAVHRIRDAVRSQCSDDQLLWAANEMATVLKEGDPSAVDAPIAWAGLAMA 417
Query: 379 QKTHHEVAAAFETEENELSKMEECA----------GAGESAFLDQASAVNV-------AK 421
+ HE+AA ++TE L+ EE A ++ Q N+ +
Sbjct: 418 HRAQHEIAAIYDTENINLNDAEERAQYTLKQAIQEDPDDAVQWHQLGLYNICMTRFSRSV 477
Query: 422 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMVYCSSNL 470
L AAL P ++ W+NL A L+ D SS ++ L++ + L
Sbjct: 478 NFLKAALARSPDCSYAWSNLGIALQLSDD-PSSETVYKRALVLSSTQQL 525
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 64/166 (38%), Gaps = 20/166 (12%)
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
LK+++Q D AV W+ LGL + R S++ L + LA P+ NLGIA S
Sbjct: 446 LKQAIQEDPDDAVQWHQLGLYNICMTRFSRSVNFLKAALARSPDCSYAWSNLGIALQLSD 505
Query: 215 DMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 274
D P++ Y L+ L +N G Q A
Sbjct: 506 D------------------PSSETVYKRALVLSSTQQLHAIFSNL--GILYRQHRNYEFA 545
Query: 275 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
++ LL +L+ P A NL + G + EKA + +P
Sbjct: 546 RKMLLRSLELCPGFAPASNNLGLVFVAEGRWEDAKSWFEKALQSDP 591
>gi|20804879|dbj|BAB92560.1| P0497A05.3 [Oryza sativa Japonica Group]
Length = 606
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/453 (53%), Positives = 318/453 (70%), Gaps = 28/453 (6%)
Query: 40 DGDQSGLGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQ----PLKAV 95
D DQ G +S +REEKVS+LK LVHVARKMPKNAHAHF+LGLMYQRL Q +A+
Sbjct: 70 DADQHCQG-ASVAREEKVSNLKAALVHVARKMPKNAHAHFMLGLMYQRLAQLAAEIFQAI 128
Query: 96 SSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKL 155
++YEK+ EILL+ E ++ RP+LLS V+IHHAQC+L S GD + D+ELE EL+EIL K+
Sbjct: 129 AAYEKSSEILLQDEEEVRRPDLLSSVRIHHAQCILQTSMGD-TFDEELESGELDEILVKM 187
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAY---FQ 212
K S++SD RQA VWN LGL+LL+SG+LQS+ISVLSSL V P+ D + NLG+AY F+
Sbjct: 188 KSSVESDPRQAAVWNILGLVLLRSGQLQSAISVLSSLTVVAPDYLDSLANLGVAYIQRFE 247
Query: 213 SGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVN 272
G++E + KCFQ+L++KDQNHPAAL+NYAALLLCKYGS AG+G N G+CL Q +
Sbjct: 248 RGNLELATKCFQELVIKDQNHPAALVNYAALLLCKYGSFAAGSGGNVSAGSCLHQKEGLA 307
Query: 273 VAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 332
VAKECLLAA+KADPKAA +W NLANAYY+ G+HR+S +CLE+AAK EP+ M RYA+AV
Sbjct: 308 VAKECLLAAVKADPKAASVWVNLANAYYMAGEHRNSKRCLEQAAKHEPSHMPARYAIAVH 367
Query: 333 RIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETE 392
RI+DA RSQ +QL WA NEMA++L+EGDP ++ PIAWAG A + HE+AAA++TE
Sbjct: 368 RIRDAVRSQCSDDQLLWASNEMATVLKEGDPSAVDAPIAWAGLAMAHRAQHEIAAAYDTE 427
Query: 393 ENELSKMEECA----------GAGESAFLDQASAVNV-------AKECLLAALKADPKAA 435
+ LS +EE A ++ Q N+ + L AA+ P +
Sbjct: 428 QINLSDVEERALYTLKQAIQEDPDDAVQWHQLGLYNICTTQFSRSVNFLKAAVARSPDCS 487
Query: 436 HIWANLANAYYLTGDHRSSGKCLEKVLMVYCSS 468
++W+NL A L+ D SS + + K ++ SS
Sbjct: 488 YVWSNLGIALQLSDD--SSCETVYKRALILSSS 518
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 20/172 (11%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
E L LK+++Q D AV W+ LGL + + + S++ L + +A P+ NLGI
Sbjct: 436 ERALYTLKQAIQEDPDDAVQWHQLGLYNICTTQFSRSVNFLKAAVARSPDCSYVWSNLGI 495
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
A S D + LIL A+++ +L ++G
Sbjct: 496 ALQLSDDSSCETVYKRALILSSSQQSYAILSNLGILYRQHGR------------------ 537
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
+A+ LL +L+ P A NL G + + C EK+ + +P
Sbjct: 538 --YELARRMLLRSLELCPGHAPANNNLGLVSIAEGRYEEAISCFEKSLQSDP 587
>gi|357126398|ref|XP_003564874.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY-like
[Brachypodium distachyon]
Length = 612
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/362 (60%), Positives = 281/362 (77%), Gaps = 4/362 (1%)
Query: 40 DGDQSGLGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYE 99
D +Q G +S SREEKVS+LK LVHVARKMPKNAHAHF+LGLMYQRLGQP KA+ +YE
Sbjct: 85 DAEQHCQG-ASVSREEKVSNLKAALVHVARKMPKNAHAHFMLGLMYQRLGQPQKAIIAYE 143
Query: 100 KAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESM 159
K+ EILL+ E ++ RP+LLS V+IHHAQC+L S GD S D+EL+ ELE+IL KLK S+
Sbjct: 144 KSSEILLQDEQEVRRPDLLSSVRIHHAQCILQASMGD-SFDEELDASELEDILVKLKSSV 202
Query: 160 QSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 219
+ D RQA VWN LGL+LL+ +LQS+ISV S+L V P+ D + NLG+AY QSG++E +
Sbjct: 203 ELDPRQAAVWNILGLVLLRGSQLQSAISVFSTLRTVAPDYLDSLANLGVAYIQSGNLELA 262
Query: 220 AKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLL 279
+KCFQ+L+LKDQNHPAAL+NY ALLLCKYGS+ AGAG G+ L Q + VAKECLL
Sbjct: 263 SKCFQELVLKDQNHPAALVNYGALLLCKYGSLAAGAGDTVSAGSYLHQKEGLVVAKECLL 322
Query: 280 AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAER 339
AA+++DPKAA +W NLANAY++ G+HR+S +CLE+AAK EPN M RYA+AV RI++A R
Sbjct: 323 AAVRSDPKAASVWVNLANAYHMAGEHRNSKRCLEQAAKFEPNHMPARYAIAVHRIREAVR 382
Query: 340 SQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKM 399
SQ +QL WA NEM+++++EGDPV + PIAWAG A + HE+AAA++ E+ L++
Sbjct: 383 SQCSDDQLLWAANEMSTVVKEGDPVDV--PIAWAGLAMAHRAQHEIAAAYDVEQISLNEA 440
Query: 400 EE 401
EE
Sbjct: 441 EE 442
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 49/62 (79%), Gaps = 4/62 (6%)
Query: 403 AGAGES----AFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 458
AGAG++ ++L Q + VAKECLLAA+++DPKAA +W NLANAY++ G+HR+S +CL
Sbjct: 296 AGAGDTVSAGSYLHQKEGLVVAKECLLAAVRSDPKAASVWVNLANAYHMAGEHRNSKRCL 355
Query: 459 EK 460
E+
Sbjct: 356 EQ 357
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
E L LK+++Q D AV W+ LGL + + + S++ L + +A P+ NLGI
Sbjct: 442 ERTLYTLKQAIQEDPDDAVQWHQLGLYNMCTTQFSRSVNFLKAAIARFPDCSYAWSNLGI 501
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
A S D + L+L A+++ +L
Sbjct: 502 ALQLSDDPSSETVYKRALVLSSSQQSHAILSNLGIL 537
>gi|326508792|dbj|BAJ95918.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 617
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 232/437 (53%), Positives = 304/437 (69%), Gaps = 20/437 (4%)
Query: 49 SSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC 108
+S SREEKVSSLK LV+VARKMPKNAHAHF+LGLMYQRLGQP KA+ +Y+K+ EILL+
Sbjct: 96 ASVSREEKVSSLKAALVNVARKMPKNAHAHFMLGLMYQRLGQPQKAIIAYDKSSEILLQD 155
Query: 109 EADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVV 168
E ++ RP+LLS V+IHHAQC+L S GD S D+EL+ EL EIL KLK S++ D RQA V
Sbjct: 156 EQEVRRPDLLSSVRIHHAQCILQASMGD-SFDEELDTSELSEILVKLKSSVELDPRQAAV 214
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
WN LGL+LL+ G+LQS+ISV S+L V P+ D + NLG+AY QSGD+E S KCFQ+L+L
Sbjct: 215 WNILGLVLLRGGQLQSAISVFSTLTTVAPDYLDSLANLGVAYIQSGDLELSTKCFQELVL 274
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
KDQ+HPAAL+NY ALLLCKYGS+ AGA G+ L Q A+ AKECLLAA+++DPKA
Sbjct: 275 KDQSHPAALMNYGALLLCKYGSLAAGASGAVSAGSYLRQKEALVAAKECLLAAVRSDPKA 334
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLS 348
A +W NLANAY+++G+HR+S +CLE+AAK EPN M RYA+AV RI+DA RSQ +QL
Sbjct: 335 ASVWVNLANAYHMSGEHRNSKRCLEQAAKFEPNHMPARYAIAVHRIRDAVRSQCSDDQLI 394
Query: 349 WAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECA----- 403
WA +EMA++L+EGD ++ P+AWAG A + HE+AAA++ E+ L + EE A
Sbjct: 395 WAASEMATVLKEGDTSVVDLPVAWAGLAMAHRAQHEIAAAYDGEQAILIEAEERALYTLK 454
Query: 404 -----GAGESAFLDQASAVNV-------AKECLLAALKADPKAAHIWANLANAYYLTGDH 451
++ Q N+ + L AA+ P+ + W+NL A L+ D
Sbjct: 455 QAIQEDPDDAVQWHQLGLYNMCTTQFSRSVNFLKAAIARSPECCYAWSNLGIALQLSND- 513
Query: 452 RSSGKCLEKVLMVYCSS 468
S + + K +V SS
Sbjct: 514 -PSSETVYKRALVLSSS 529
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
E L LK+++Q D AV W+ LGL + + + S++ L + +A P C NLGI
Sbjct: 447 ERALYTLKQAIQEDPDDAVQWHQLGLYNMCTTQFSRSVNFLKAAIARSPECCYAWSNLGI 506
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
A S D + L+L A+++ +L
Sbjct: 507 ALQLSNDPSSETVYKRALVLSSSQQSYAILSNIGIL 542
>gi|10177301|dbj|BAB10562.1| unnamed protein product [Arabidopsis thaliana]
Length = 404
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/313 (69%), Positives = 257/313 (82%), Gaps = 3/313 (0%)
Query: 3 KEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLKT 62
KE++ EVE KKI+K+GKCRSR SK++S+ + GVDADGD + G +S REEK+S+LK
Sbjct: 71 KEVEPGEVEAKKISKVGKCRSR--SKIESSSDCGVDADGDLANQGVPAS-REEKISNLKM 127
Query: 63 GLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ 122
GL+HVARKMPKNAHAHF+LGLM+QRLGQ KA+ YEKAEEILL CE +IARPELL LVQ
Sbjct: 128 GLIHVARKMPKNAHAHFILGLMFQRLGQSQKAIPEYEKAEEILLGCEPEIARPELLLLVQ 187
Query: 123 IHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRL 182
IHH QCLL + GD KELE EELEEILSKLK+S++ D RQA VWNTLGL+LLK+G L
Sbjct: 188 IHHGQCLLLDGFGDTDSVKELEGEELEEILSKLKDSIKLDVRQAAVWNTLGLMLLKAGCL 247
Query: 183 QSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAA 242
S+ISVLSSLLA+ P+N DC+ NLG+AY QSGDME SAKCFQDL+LKD NHPAALINYAA
Sbjct: 248 MSAISVLSSLLALVPDNYDCLANLGVAYLQSGDMELSAKCFQDLVLKDHNHPAALINYAA 307
Query: 243 LLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLT 302
LLCK+ S +AGAGAN G A DQ + +NVAKECLLAAL++DPK+AH W NLAN+YY+
Sbjct: 308 ELLCKHSSTVAGAGANGGADASEDQKAPMNVAKECLLAALRSDPKSAHAWVNLANSYYMM 367
Query: 303 GDHRSSGKCLEKA 315
GDHRSS KCLEK
Sbjct: 368 GDHRSSSKCLEKV 380
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 47/54 (87%)
Query: 412 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMVY 465
DQ + +NVAKECLLAAL++DPK+AH W NLAN+YY+ GDHRSS KCLEKVL+ +
Sbjct: 331 DQKAPMNVAKECLLAALRSDPKSAHAWVNLANSYYMMGDHRSSSKCLEKVLLAH 384
>gi|302761724|ref|XP_002964284.1| hypothetical protein SELMODRAFT_438952 [Selaginella moellendorffii]
gi|302766761|ref|XP_002966801.1| hypothetical protein SELMODRAFT_439727 [Selaginella moellendorffii]
gi|300166221|gb|EFJ32828.1| hypothetical protein SELMODRAFT_439727 [Selaginella moellendorffii]
gi|300168013|gb|EFJ34617.1| hypothetical protein SELMODRAFT_438952 [Selaginella moellendorffii]
Length = 707
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/446 (48%), Positives = 287/446 (64%), Gaps = 30/446 (6%)
Query: 3 KEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLKT 62
KE A+ EGKK K K RS+ SK E GVD GD G + +EEK+ SLK
Sbjct: 137 KEDSPADEEGKKSGKTFKSRSK--SKWS---ESGVD--GDLEYPGNVQNVKEEKIKSLKA 189
Query: 63 GLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI---ARPELLS 119
GLVHV+RK+PKNAHAHF+LGLMYQR QPLKA+ ++E+A+EIL + + D+ R +LL+
Sbjct: 190 GLVHVSRKLPKNAHAHFVLGLMYQRSDQPLKAIPAFERAQEILKQADDDLCRQGRAQLLA 249
Query: 120 LVQIHHAQCLLP-ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLK 178
LVQ HHAQCLL + G S K+ E + I SK+KE++ D+ QA +WNTLGL+LL
Sbjct: 250 LVQNHHAQCLLQGKIGGQISPGKDFSKENMRLIGSKVKEAVPEDSGQASIWNTLGLLLLH 309
Query: 179 SGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALI 238
+GR+QS+ISV +SLL++ P++ D + NLG+AYFQSG+++ +A+C Q ++ KD HP ALI
Sbjct: 310 TGRIQSAISVFTSLLSILPDSLDALANLGVAYFQSGELDNAARCLQSVLEKDVYHPGALI 369
Query: 239 NYAALLLCKYGSVL--AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 296
NY A+L+ ++GS L AGAGA+ GA Q A + A L +LK DPKA W NLA
Sbjct: 370 NYGAILVRQHGSFLPGAGAGASKETGAYATQLKAAHAACLYLQTSLKEDPKAGSAWVNLA 429
Query: 297 NAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMAS 356
AY + GD ++ KCLE+A++LEP+ ++TRYAVA RIKDAERS +P+EQ+SWA NEMAS
Sbjct: 430 AAYEVLGDFTNASKCLEQASRLEPHRLATRYAVAAHRIKDAERSDDPSEQMSWAANEMAS 489
Query: 357 ILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASA 416
ILREGDP P +AWAG A V + HE AA+F+ +D
Sbjct: 490 ILREGDPGTFHPHLAWAGLAMVNRAQHESAASFDR-----------------GVMDSKDV 532
Query: 417 VNVAKECLLAALKADPKAAHIWANLA 442
A L A++ DP+ A W L
Sbjct: 533 EERAVHTLQQAIEEDPEDALKWHQLG 558
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 403 AGAGES----AFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 458
AGAG S A+ Q A + A L +LK DPKA W NLA AY + GD ++ KCL
Sbjct: 386 AGAGASKETGAYATQLKAAHAACLYLQTSLKEDPKAGSAWVNLAAAYEVLGDFTNASKCL 445
Query: 459 EK 460
E+
Sbjct: 446 EQ 447
>gi|449498851|ref|XP_004160652.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC-like [Cucumis
sativus]
Length = 366
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 103/196 (52%), Positives = 120/196 (61%), Gaps = 37/196 (18%)
Query: 216 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 275
ME S KCFQ+LIL DQNH AAL+ YAA LLCKYGS +A AGAN GEG ++ +NVAK
Sbjct: 1 MELSEKCFQELILTDQNHLAALVYYAAFLLCKYGSTVASAGANAGEGGVDEKVVGMNVAK 60
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 335
ECLLAALK DPKAA W NLANAY++TGDHRSS KCLEK AK EPNCMS K
Sbjct: 61 ECLLAALKVDPKAAVAWENLANAYFVTGDHRSSAKCLEKGAKQEPNCMS----------K 110
Query: 336 DAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENE 395
+AERSQ+ T WAGF+ V K HE+AA F T+ +E
Sbjct: 111 NAERSQDHT---------------------------WAGFSMVHKIQHEIAAGFRTDLSE 143
Query: 396 LSKMEECAGAGESAFL 411
L + E+ A + F
Sbjct: 144 LREKEDHAVYSLNQFF 159
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 45/58 (77%)
Query: 403 AGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 460
A AGE ++ +NVAKECLLAALK DPKAA W NLANAY++TGDHRSS KCLEK
Sbjct: 42 ANAGEGGVDEKVVGMNVAKECLLAALKVDPKAAVAWENLANAYFVTGDHRSSAKCLEK 99
>gi|449487817|ref|XP_004157815.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase-like [Cucumis sativus]
Length = 276
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 76/93 (81%)
Query: 311 CLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPI 370
CLEK AKLEPNCMS RYAVA+ R+KDAERSQ+ +EQLSWAGNEMAS++R+GD + I+ +
Sbjct: 5 CLEKGAKLEPNCMSMRYAVAMHRLKDAERSQDRSEQLSWAGNEMASVIRDGDGLTIDHSV 64
Query: 371 AWAGFAAVQKTHHEVAAAFETEENELSKMEECA 403
AWAG + V KT HE+AA F T+++EL + E+ A
Sbjct: 65 AWAGLSMVHKTQHEIAAGFRTDQSELREKEDHA 97
>gi|10177302|dbj|BAB10563.1| unnamed protein product [Arabidopsis thaliana]
Length = 262
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 98/159 (61%), Gaps = 17/159 (10%)
Query: 323 MSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTH 382
M+TR+AVAV RIKDAERSQ+ ++QLSWAGNEMAS++REG+ V I+PPIAWAG A K
Sbjct: 1 MATRFAVAVQRIKDAERSQDASDQLSWAGNEMASVIREGESVPIDPPIAWAGLAMAHKAQ 60
Query: 383 HEVAAAFETEENELSKMEECA--GAGESAFLDQASAVN---------------VAKECLL 425
HE+AAAF + NEL++MEE A ++ D AV ++++ L
Sbjct: 61 HEIAAAFVADRNELTEMEERAVYSLKQAVTEDPEDAVRWHQLGLHSLCSQQYKLSQKYLK 120
Query: 426 AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
AA+ + ++ W+NL + L+ +H + + ++ L V
Sbjct: 121 AAVGRSRECSYAWSNLGISLQLSDEHSEAEEVYKRALTV 159
>gi|428175958|gb|EKX44845.1| hypothetical protein GUITHDRAFT_109267 [Guillardia theta CCMP2712]
Length = 581
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 164/348 (47%), Gaps = 37/348 (10%)
Query: 55 EKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEIL------LRC 108
EK L+T LV V+++M ++ + F LGLMY R KA ++++ + L L+
Sbjct: 65 EKEKILRTALVAVSKRMGESFYCWFNLGLMYFRNQVYTKAKEAFKRCLDCLKGYKQPLKL 124
Query: 109 EADIARPELLSLVQIHHAQCLLPESS--GDNSLDKELEPEELEEILSKLKESMQSDTRQA 166
+ L + V HAQC + E + G + D E P +++E + ++ ++D Q
Sbjct: 125 INEKRYVTLEARVMSLHAQCCIYELTLPGMVATD-EHNPVDVQE---QFIQATKTDNMQP 180
Query: 167 VVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDL 226
+WN +GL+ + + + + +L D I NLG+++ +G++ +A+ FQ +
Sbjct: 181 DIWNNVGLLHMSLDKFDGAKMIFQPILMNFTQYNDAISNLGLSHLCNGELTDAARSFQTV 240
Query: 227 ILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADP 286
IL+D +H AL NY LLL + + V K A++ DP
Sbjct: 241 ILRDSSHLEALNNYGVLLLRHRNY----------------KNAIVFFEKATQKPAIELDP 284
Query: 287 KAAHIWANLANAYYLTGDHRSSGKCLEKAAKL-EPNCMST-RYAVAVSRIKDAERSQEP- 343
+++W+NLA AY G + + +A +L + N +T A ++ + +E E
Sbjct: 285 GQSYVWSNLACAYSAEGKLNEAARAFRQARELDDTNVQATCNLAHHITWMVQSEADPEAR 344
Query: 344 TEQLSWAGNEMASIL-REGDPVQIEPPIAWAGFAAVQKTHHEVAAAFE 390
+L A + +++L + VQ AW G AAV K+ E+A + E
Sbjct: 345 ARKLEQAEHMYSTVLCDQSSSVQ-----AWTGLAAVFKSQSEMATSEE 387
>gi|73670079|ref|YP_306094.1| TPR repeat-containing protein [Methanosarcina barkeri str. Fusaro]
gi|72397241|gb|AAZ71514.1| TPR repeat [Methanosarcina barkeri str. Fusaro]
Length = 927
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 40/264 (15%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC--- 128
P+N+ A + G Q LG +A+++Y KA EI + + L ++ +
Sbjct: 183 PRNSLAWYNKGSALQELGNYQEAITAYNKAIEIYPEYKEAWYKKGLAFYNSGNYEEAVKA 242
Query: 129 ------LLPES-----SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILL 177
L P++ + N+L K EE ++ ES++ D + +V WN LG +
Sbjct: 243 CNKTIELDPQNPRVWANKGNALSK---LNSYEEAITAYNESIELDPQNSVAWNGLGFAVA 299
Query: 178 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-LKDQNHPAA 236
SG + +I + + +DP N + + N G A + G+ E++ K I + QN
Sbjct: 300 SSGNYEEAIKFYNKAIEIDPQNSEALSNKGFALYNVGNREEAIKALDKAIEVNPQN---- 355
Query: 237 LINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 296
A+ GS+L G D+A+ + DPK + W N
Sbjct: 356 -----AVAWYDKGSILKNLGNYEEAVEAFDKATEL-------------DPKKSSAWNNKG 397
Query: 297 NAYYLTGDHRSSGKCLEKAAKLEP 320
NA G++ + K +KA +++P
Sbjct: 398 NALSSLGNYDEAIKAYDKAIEIDP 421
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 76/180 (42%), Gaps = 14/180 (7%)
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
+S++ D R ++ W G L SG + I+ + +DP N D N G A G
Sbjct: 481 FDKSIEIDPRNSIAWVNKGNALYNSGEYEGVITACDKAIELDPKNLDAWTNKGKALSSLG 540
Query: 215 DMEQSAKCF--------QDLILKDQNHPAA--LINYAALLLCKYGSVLAGAG----ANTG 260
D E++ K + QD + + A L NY L +++ + +
Sbjct: 541 DYEEAIKAYDKALEIEPQDPLTWNNREIAFGHLNNYEEALRAHNREIVSDSEDPEVSWND 600
Query: 261 EGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
+G L + + + A++ DP+ A W N N+++ ++ + K +KA +L+P
Sbjct: 601 KGLALYYSGNYEESVKAYDKAIELDPEYADAWFNKGNSFFSLKNYEEAIKAYDKAIELKP 660
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 67/341 (19%), Positives = 132/341 (38%), Gaps = 40/341 (11%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E ++ ++++ D + WN G+ L + +I + + +DP N N G
Sbjct: 94 KEAINAYDKAIELDPQNPEAWNNKGVALSNLSNYEEAIKAYNKAIELDPQNSLFWYNKGK 153
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
++ G E+S K +++ + +N A+ L S+ A +G+ L +
Sbjct: 154 TLYELGKQEESTKAYKESLEASEN---------AIELDPRNSL-----AWYNKGSALQEL 199
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP-------- 320
A A++ P+ W A+Y +G++ + K K +L+P
Sbjct: 200 GNYQEAITAYNKAIEIYPEYKEAWYKKGLAFYNSGNYEEAVKACNKTIELDPQNPRVWAN 259
Query: 321 --NCMS--TRYAVAVSRIKDAERSQEPTEQLSW---------AGNEMASILREGDPVQIE 367
N +S Y A++ ++ +P ++W +GN +I ++I+
Sbjct: 260 KGNALSKLNSYEEAITAYNES-IELDPQNSVAWNGLGFAVASSGNYEEAIKFYNKAIEID 318
Query: 368 PPIAWA----GFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKEC 423
P + A GFA + E A + E++ A + + L A E
Sbjct: 319 PQNSEALSNKGFALYNVGNREEAIKALDKAIEVNPQNAVAWYDKGSILKNLGNYEEAVEA 378
Query: 424 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
A + DPK + W N NA G++ + K +K + +
Sbjct: 379 FDKATELDPKKSSAWNNKGNALSSLGNYDEAIKAYDKAIEI 419
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 127/334 (38%), Gaps = 48/334 (14%)
Query: 149 EEILSKLKESMQS-------DTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCD 201
EE KES+++ D R ++ W G L + G Q +I+ + + + P +
Sbjct: 162 EESTKAYKESLEASENAIELDPRNSLAWYNKGSALQELGNYQEAITAYNKAIEIYPEYKE 221
Query: 202 CIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGE 261
G+A++ SG+ E++ K I D +P N +
Sbjct: 222 AWYKKGLAFYNSGNYEEAVKACNKTIELDPQNPRVWAN---------------------K 260
Query: 262 GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
G L + ++ A +++ DP+ + W L A +G++ + K KA +++P
Sbjct: 261 GNALSKLNSYEEAITAYNESIELDPQNSVAWNGLGFAVASSGNYEEAIKFYNKAIEIDP- 319
Query: 322 CMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEP--PIAWAGFAAVQ 379
+++E L GN +I +++ P +AW ++
Sbjct: 320 -------------QNSEALSNKGFALYNVGNREEAIKALDKAIEVNPQNAVAWYDKGSIL 366
Query: 380 KT---HHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAH 436
K + E AF+ + EL + A + L + A + A++ DP+
Sbjct: 367 KNLGNYEEAVEAFD-KATELDPKKSSAWNNKGNALSSLGNYDEAIKAYDKAIEIDPQDPG 425
Query: 437 IWANLANAYYLTGDHRSSGKCLEKVLMVYCSSNL 470
W N A G + S K +K + + SS++
Sbjct: 426 PWNNKGIALSNLGSYEESIKAFDKAIEINLSSSV 459
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 79/196 (40%), Gaps = 23/196 (11%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+ E L+ ++++ + + + W G L GR + +++ + L +DP+N N
Sbjct: 712 DYEGALNAYNKAVEINPQYSDAWYNKGNTLCSLGRYEEAVTAFNKTLEIDPHNSFAWCNK 771
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
GIA G+ E++ K F AL + S++ + +G L
Sbjct: 772 GIALSSLGNYEEAMKSFD----------------KALEIDSQNSLIW-----SNKGLALF 810
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
+ A + ++ D W N +A++L G++ + K K +L+P
Sbjct: 811 EFGKYEEAVKAYNKTIEIDQSNTETWNNRGSAFFLIGNYEEAMKNYNKTIELDPEYSLAW 870
Query: 327 YAVA--VSRIKDAERS 340
Y A S I D E+S
Sbjct: 871 YNRACLYSLINDKEQS 886
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 131/340 (38%), Gaps = 44/340 (12%)
Query: 149 EEILSKLKESMQSDTRQA-VVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
EE L + SD+ V WN GL L SG + S+ + +DP D N G
Sbjct: 577 EEALRAHNREIVSDSEDPEVSWNDKGLALYYSGNYEESVKAYDKAIELDPEYADAWFNKG 636
Query: 208 IAYFQSGDMEQSAKCFQDLI-LKDQNHPA------ALIN--YAALLLCKYGSVL------ 252
++F + E++ K + I LK QN A AL N Y A L Y +
Sbjct: 637 NSFFSLKNYEEAIKAYDKAIELKPQNSLAWNNKGLALNNSSYYAEALKSYDKAIELNSQD 696
Query: 253 AGAGANTGE--GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGK 310
+ A N G + D A+N + A++ +P+ + W N N G + +
Sbjct: 697 SAAWNNKGNTLSSLYDYEGALNAYNK----AVEINPQYSDAWYNKGNTLCSLGRYEEAVT 752
Query: 311 CLEKAAKLEP-NCMST-RYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEP 368
K +++P N + +A+S + + E + + ++ + +
Sbjct: 753 AFNKTLEIDPHNSFAWCNKGIALSSLGNYEEAMKSFDK--------------ALEIDSQN 798
Query: 369 PIAWA--GFAAVQKTHHE--VAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECL 424
+ W+ G A + +E V A +T E + S E G + FL A +
Sbjct: 799 SLIWSNKGLALFEFGKYEEAVKAYNKTIEIDQSNTETWNNRGSAFFL--IGNYEEAMKNY 856
Query: 425 LAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
++ DP+ + W N A Y L D S L++ + +
Sbjct: 857 NKTIELDPEYSLAWYNRACLYSLINDKEQSISDLKRAIEI 896
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 65/174 (37%), Gaps = 25/174 (14%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
EE ++ ++++ D + W G+ L G + ++ L +D N N G+
Sbjct: 748 EEAVTAFNKTLEIDPHNSFAWCNKGIALSSLGNYEEAMKSFDKALEIDSQNSLIWSNKGL 807
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINY--AALLLCKYGSVLAGAGANTGEGACLD 266
A F+ G E++ K + I DQ++ N A L+ Y +
Sbjct: 808 ALFEFGKYEEAVKAYNKTIEIDQSNTETWNNRGSAFFLIGNYEEAMKNYN---------- 857
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
++ DP+ + W N A Y L D S L++A ++ P
Sbjct: 858 -------------KTIELDPEYSLAWYNRACLYSLINDKEQSISDLKRAIEINP 898
>gi|93279690|pdb|2FO7|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix
(Trigonal Crystal Form)
gi|168177007|pdb|2HYZ|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix
(Orthorombic Crystal Form)
Length = 136
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 21/155 (13%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
A W LG K G +I L +DP + + NLG AY++ GD +++ + +Q
Sbjct: 1 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQK 60
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 285
+ D A N L A G+ + A E AL+ D
Sbjct: 61 ALELDPRSAEAWYN------------LGNAYYKQGD---------YDEAIEYYQKALELD 99
Query: 286 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
P++A W NL NAYY GD+ + + +KA +L+P
Sbjct: 100 PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP 134
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 25/151 (16%)
Query: 75 AHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLR-CEADIARPELLSLVQIHHAQCLLPES 133
A A + LG Y + G +A+ Y+KA E+ R EA +L ++ Q
Sbjct: 1 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEA------WYNLGNAYYKQ------ 48
Query: 134 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLL 193
GD +E + +++++ D R A W LG K G +I L
Sbjct: 49 -GD-----------YDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKAL 96
Query: 194 AVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 224
+DP + + NLG AY++ GD +++ + +Q
Sbjct: 97 ELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQ 127
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 21/131 (16%)
Query: 205 NLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGAC 264
NLG AY++ GD +++ + +Q + D A N L A G+
Sbjct: 6 NLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYN------------LGNAYYKQGD--- 50
Query: 265 LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS 324
+ A E AL+ DP++A W NL NAYY GD+ + + +KA +L+P
Sbjct: 51 ------YDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAE 104
Query: 325 TRYAVAVSRIK 335
Y + + K
Sbjct: 105 AWYNLGNAYYK 115
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+ +E + +++++ D R A W LG K G +I L +DP + + NL
Sbjct: 16 DYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNL 75
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 239
G AY++ GD +++ + +Q + D A N
Sbjct: 76 GNAYYKQGDYDEAIEYYQKALELDPRSAEAWYN 108
>gi|116748938|ref|YP_845625.1| hypothetical protein Sfum_1501 [Syntrophobacter fumaroxidans MPOB]
gi|116698002|gb|ABK17190.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB]
Length = 629
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 124/302 (41%), Gaps = 73/302 (24%)
Query: 65 VHVARKMPKNAHAHF-LLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQI 123
+ A K+P+ + A + +G + R G+ KA SYEK +LR E D+ R V++
Sbjct: 78 IKKAEKLPEMSEADYERMGDTFARQGETTKAFISYEK----VLRKEPDLTR------VRL 127
Query: 124 HHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQS-------------------DTR 164
L D ++ + +++L+K + Q+ + R
Sbjct: 128 KRGMMFLARDMNDEAI------RDFQQVLAKEPGNAQAYEGIGHALFKRRRYDEAEKNFR 181
Query: 165 QAV-----VW---NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 216
+AV +W N LG++ R + ++ + +AV P+ NLGI+Y GD
Sbjct: 182 EAVKLNNSLWMSHNFLGIVYDYKQRPELAVPEYQAAIAVRPDEGLLYNNLGISYAMMGDF 241
Query: 217 EQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKE 276
E++A FQ+ + K +P + N ++LC+ G Q+ A
Sbjct: 242 EKAAAAFQEAMQKRPTNP-KISNNLGIILCRLGR----------------QSEA------ 278
Query: 277 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKD 336
LAA A + NL AY + G+ + + E+A L +T YA A +K
Sbjct: 279 --LAAFGKAGDEAQAYNNLGCAYMMDGEFEKAARAFERAVSLR----TTYYAQASDNLKK 332
Query: 337 AE 338
AE
Sbjct: 333 AE 334
>gi|386002707|ref|YP_005921006.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
gi|357210763|gb|AET65383.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
Length = 949
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/411 (20%), Positives = 147/411 (35%), Gaps = 56/411 (13%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSL---------VQ 122
P++ H + G + LG +A+ Y++A E D+ R L+L V+
Sbjct: 90 PQDPHIWYSKGFVLYGLGIYDEAIDCYDRAME-FNSTGPDLWRARGLALYSLGRYEEAVR 148
Query: 123 IHHAQCLLPESSGDNSLDKELEP---EELEEILSKLKESMQSDTRQAVVWNTLGLILLKS 179
+ + + GD K L E+ + ++ D A W+ L L
Sbjct: 149 SYDEAIVFDPAQGDLWYQKGLALCGLGRYEKAIESYDFAITIDGDDAASWHGKALALYSL 208
Query: 180 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 239
GR + +I + +DP+ D N GIA + G E++ KC+ + D + A N
Sbjct: 209 GRAEEAIDCYDRAIDIDPSLTDVWYNKGIALYALGRHEEAFKCYDAAVEIDPLYHPAWFN 268
Query: 240 YAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 299
+G V A +C A+ DP +W N NA
Sbjct: 269 ---------------------KGLAFYSLGRVEEAIDCYDRAIDIDPSLVAVWNNKGNAL 307
Query: 300 YLTGDHRSSGKCLEKAAKLEPNCMSTRY--AVAVSRIKDAERSQEPTEQLSWAGNEMASI 357
Y G + +C +A +++P + Y V + R+ E + E ++L
Sbjct: 308 YALGRFDEAQECYRRAVEIDPEYSNPWYNLGVVLQRLGRGEEALEAYDRL---------- 357
Query: 358 LREGDPVQIEPPI--AWA--GFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQ 413
++I+P + AW G A ++ AA E+ ++ L
Sbjct: 358 ------IEIDPNLSEAWYNRGLALYSLGRYDEAAGCYDRVLEIDPENGDVWYDKALALGS 411
Query: 414 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
A +C AL+A P+ + N N Y + S C V+ +
Sbjct: 412 LGRYEEALDCYDEALEAGPRRPEVLNNRCNILYSLERYNESVGCYGDVIGI 462
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/347 (20%), Positives = 125/347 (36%), Gaps = 57/347 (16%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
L+E LS S++ D + +W + G +L G +I + + D G
Sbjct: 75 LDEALSCFNRSLEIDPQDPHIWYSKGFVLYGLGIYDEAIDCYDRAMEFNSTGPDLWRARG 134
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS------------VLAGA 255
+A + G E++ + + + I+ D L L LC G + G
Sbjct: 135 LALYSLGRYEEAVRSYDEAIVFDPAQ-GDLWYQKGLALCGLGRYEKAIESYDFAITIDGD 193
Query: 256 GANTGEGACLDQAS--AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
A + G L S A +C A+ DP +W N A Y G H + KC +
Sbjct: 194 DAASWHGKALALYSLGRAEEAIDCYDRAIDIDPSLTDVWYNKGIALYALGRHEEAFKCYD 253
Query: 314 KAAKLEPNCMSTRY-----AVAVSRIKDA----ERS--QEPTEQLSW--AGNEMASILRE 360
A +++P + ++ R+++A +R+ +P+ W GN + ++ R
Sbjct: 254 AAVEIDPLYHPAWFNKGLAFYSLGRVEEAIDCYDRAIDIDPSLVAVWNNKGNALYALGR- 312
Query: 361 GDPVQIEPPIAWAGFAAVQKTHH---EVAAAFETEENELSKMEECAGAGESAFLDQASAV 417
F Q+ + E+ + L + + G GE A
Sbjct: 313 --------------FDEAQECYRRAVEIDPEYSNPWYNLGVVLQRLGRGEEAL------- 351
Query: 418 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
E ++ DP + W N A Y G + + C ++VL +
Sbjct: 352 ----EAYDRLIEIDPNLSEAWYNRGLALYSLGRYDEAAGCYDRVLEI 394
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 61/174 (35%), Gaps = 27/174 (15%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
LEE + E ++ D VW GL L GR +I L + P+ N G
Sbjct: 551 LEEAVESFDEVIEIDPSYEGVWRLKGLALYALGRSDEAIDCYDEALEISPSEVSLWYNRG 610
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 267
+ F G ++ + + +I D+ +G L
Sbjct: 611 VVLFSLGRYGEAIESYDRVIELDRYE---------------------------KGEALYS 643
Query: 268 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
+ A EC L+ P A W A+ + GD+ S +C ++ +++P
Sbjct: 644 LGRYDEAIECYEKVLEVSPLEAKAWYQKGLAHQILGDYERSAECYDRVVEIDPG 697
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 102/263 (38%), Gaps = 48/263 (18%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A F GL + LG+ +A+ Y++A +I P SLV + + +
Sbjct: 260 PLYHPAWFNKGLAFYSLGRVEEAIDCYDRAIDI---------DP---SLVAVWNNKG--- 304
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
N+L +E +E + +++ D + W LG++L + GR + ++
Sbjct: 305 -----NALYALGRFDEAQECY---RRAVEIDPEYSNPWYNLGVVLQRLGRGEEALEAYDR 356
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYG 249
L+ +DPN + N G+A + G +++A C+ ++ D + + A L L +Y
Sbjct: 357 LIEIDPNLSEAWYNRGLALYSLGRYDEAAGCYDRVLEIDPENGDVWYDKALALGSLGRYE 416
Query: 250 SVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 309
L +C AL+A P+ + N N Y + S
Sbjct: 417 EAL-----------------------DCYDEALEAGPRRPEVLNNRCNILYSLERYNESV 453
Query: 310 KCLEKAAKLEPNCMSTRYAVAVS 332
C ++P + Y V+
Sbjct: 454 GCYGDVIGIDPGYENAWYNRGVA 476
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 131/356 (36%), Gaps = 49/356 (13%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
EE L ++ D + W GL L GR + +L +DP N D + +
Sbjct: 348 EEALEAYDRLIEIDPNLSEAWYNRGLALYSLGRYDEAAGCYDRVLEIDPENGDVWYDKAL 407
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK---------YGSVLAGAGANT 259
A G E++ C+ + + P L N +L YG V+ G +
Sbjct: 408 ALGSLGRYEEALDCYDEALEAGPRRPEVLNNRCNILYSLERYNESVGCYGDVI---GIDP 464
Query: 260 G-EGACLDQASAVNVAKECLLAALKADPKAA------HIWANLANAYYLTGDHRSSGKCL 312
G E A ++ A+ A+ AA W + +A+ G + + +
Sbjct: 465 GYENAWYNRGVALYTLGRYEEASASYGEAAALNGSRVDAWVGMGDAFAAAGIYDRAVEAY 524
Query: 313 EKAAKLEPNCMSTRYAVAV-----SRIKDAERSQ------EPTEQLSW--AGNEMASILR 359
+ A L P + Y + SR+++A S +P+ + W G + ++ R
Sbjct: 525 DGAIALYPGDPAVWYNRGLLLYNASRLEEAVESFDEVIEIDPSYEGVWRLKGLALYALGR 584
Query: 360 EGDPV-------QIEPPIA--WAGFAAVQKTHHEVAAAFETEEN--ELSKMEECAGAGES 408
+ + +I P W V + A E+ + EL + E+ GE+
Sbjct: 585 SDEAIDCYDEALEISPSEVSLWYNRGVVLFSLGRYGEAIESYDRVIELDRYEK----GEA 640
Query: 409 AFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
+ + A EC L+ P A W A+ + GD+ S +C ++V+ +
Sbjct: 641 LY--SLGRYDEAIECYEKVLEVSPLEAKAWYQKGLAHQILGDYERSAECYDRVVEI 694
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 42/91 (46%)
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
E LE+ ++ ++ D W+ G L+K+GRL+ + + +A+DP++ +
Sbjct: 813 EAGRLEDAVASFDRAIALDQEDPEAWSMRGRALMKAGRLEDAAASFDRAIALDPSSGEAQ 872
Query: 204 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHP 234
G + G E++ C++ I D P
Sbjct: 873 RGRGSVFEAQGRAEEAIGCYEAAIALDPPTP 903
>gi|118350024|ref|XP_001008293.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89290060|gb|EAR88048.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 373
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 148/389 (38%), Gaps = 88/389 (22%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P+ +AH LG +Y+++G+P +KA+E +L+ +I + SL+++ + L
Sbjct: 60 PQFENAHTSLGYLYKKIGKP-------QKAKECILKA-LEINPKSVFSLLELGY----LY 107
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
E D ++ E+ + + L Q + + LGL K LQ +
Sbjct: 108 E-------DMNMQDEQKQTYMKIL----QIEPKNFEAQYGLGLYYFKQNMLQEARHWFLQ 156
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 251
+L ++PN + NLGI + G+ E + + +Q I Q +P Y L
Sbjct: 157 VLEINPNFKSVVYNLGIISEKLGEYENAKQFYQKAI---QLNPQDANTYFNL-------- 205
Query: 252 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 311
G ++ V A++C L + +PK+ + NL Y+ G + + KC
Sbjct: 206 ----------GVTYEKMKNVEEARKCYLKVQQLEPKSIYALNNLGAIYFDLGQFQEAQKC 255
Query: 312 LEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIA 371
E K++P Y ++ IK GN SI +QI P
Sbjct: 256 FEDIIKIDPQNFGAYYNLSAIYIK--------------KGNIEESIQCLQKTIQINPEYI 301
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
A H ++ F T+ + A +C A+K +
Sbjct: 302 NA--------HKQLGQIFYTK----------------------GQFDEAIQCYQQAIKIN 331
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEK 460
+ + + +AN Y L G+ + + EK
Sbjct: 332 SQDSDSYFMIANTYNLMGNQKEAKFYQEK 360
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 80/209 (38%), Gaps = 10/209 (4%)
Query: 256 GANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 315
A+T G + AKEC+L AL+ +PK+ L Y + K
Sbjct: 64 NAHTSLGYLYKKIGKPQKAKECILKALEINPKSVFSLLELGYLYEDMNMQDEQKQTYMKI 123
Query: 316 AKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGF 375
++EP +Y + + K L A + +L E +P + + G
Sbjct: 124 LQIEPKNFEAQYGLGLYYFKQ--------NMLQEARHWFLQVL-EINP-NFKSVVYNLGI 173
Query: 376 AAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAA 435
+ + +E A F + +L+ + ++ V A++C L + +PK+
Sbjct: 174 ISEKLGEYENAKQFYQKAIQLNPQDANTYFNLGVTYEKMKNVEEARKCYLKVQQLEPKSI 233
Query: 436 HIWANLANAYYLTGDHRSSGKCLEKVLMV 464
+ NL Y+ G + + KC E ++ +
Sbjct: 234 YALNNLGAIYFDLGQFQEAQKCFEDIIKI 262
>gi|146184699|ref|XP_001029949.2| SLEI family protein [Tetrahymena thermophila]
gi|146143045|gb|EAR82286.2| SLEI family protein [Tetrahymena thermophila SB210]
Length = 2342
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 81/392 (20%), Positives = 157/392 (40%), Gaps = 57/392 (14%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL-SLVQIHHAQCLL 130
P AH+ GL Y++ +A+ SY+KA +I P+ L +L+++
Sbjct: 380 PDYYKAHYNSGLAYEKDNLIEEAIESYKKAIKI---------NPKFLKALIRL------- 423
Query: 131 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
GD +++E+ ++E + K+ +Q + +LG + L + +I
Sbjct: 424 ----GDICVEREM----IDEGIECFKKIVQLSPNSEYDFFSLGELYLTKKIYEEAIKCYK 475
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN----YAALLLC 246
L ++P + NLG+AY +Q+ +C++ I D N+ A N YA+ +
Sbjct: 476 KTLEINPQYIKALNNLGLAYEYQQMFDQAIECYKKAIEIDPNYHLAYYNCGISYASKKMV 535
Query: 247 K-----YGSVL----AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 297
Y VL A+T G Q + A EC +AL+ + + I NL
Sbjct: 536 DEAIECYKKVLEINPQYLNASTNMGYLYSQQKMYDKAIECYQSALQVNENSLKILNNLGY 595
Query: 298 AYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASI 357
AYY + H + + ++ +++P Y + V+ + + E
Sbjct: 596 AYYKSNMHDQAIEIYKRVIQIDPKSFLANYNIGVAY---------QMKNMFDEAIEFYKK 646
Query: 358 LREGDPVQIEPPIAWAGFAAVQKTHHEVAAAF-ETEENELSKMEECAGAGESAFLDQASA 416
+ E P I +K + E + + ++ + K+EE + L+
Sbjct: 647 VEEIFPKYFTVFIRLGNVYGEKKMYEEALENYNKVKDFSMEKLEEISN------LENVDK 700
Query: 417 VNVAKE---CLLAALKADPKAAHIWANLANAY 445
+N+ +E C + A++ +P+ + LA Y
Sbjct: 701 MNLIEEVIGCYIKAIELNPEYVQAYYYLAIIY 732
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 89/466 (19%), Positives = 164/466 (35%), Gaps = 94/466 (20%)
Query: 51 SSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEA 110
S EE + LKT L P +A AH LG +Y++ A+ SY+ A E
Sbjct: 193 SMTEEAIRMLKTAL----EIDPNSAEAHERLGFIYEKQSMFDSALISYKIALE------- 241
Query: 111 DIARPELLSL-VQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVW 169
P LS+ + + + L K+L+ +E + +L+++++ D +
Sbjct: 242 --KNPNFLSVYISLAYIYFL-----------KQLD----QEAIKQLRKAIEIDPNFVQAY 284
Query: 170 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 229
LG + + + +I + +DP + NLG+ Y+ G S C++ I
Sbjct: 285 ERLGFVFQNRKKYEEAIKNYKKAIELDPKYFNAQYNLGLLYYYQGKYNDSLLCYKKAIEL 344
Query: 230 DQNHPAALINYAALLL------------------------CKYGSVLAGAGANTGEGACL 265
D + A N + Y S LA N E A
Sbjct: 345 DPKYVDAYNNLGLVYFGLDMNNEAIQYYQKALELNPDYYKAHYNSGLAYEKDNLIEEAIE 404
Query: 266 DQASAVNVAK-----------------------ECLLAALKADPKAAHIWANLANAYYLT 302
A+ + EC ++ P + + + +L Y
Sbjct: 405 SYKKAIKINPKFLKALIRLGDICVEREMIDEGIECFKKIVQLSPNSEYDFFSLGELYLTK 464
Query: 303 GDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGD 362
+ + KC +K ++ P +Y A++ + A Q+ +Q +I
Sbjct: 465 KIYEEAIKCYKKTLEINP-----QYIKALNNLGLAYEYQQMFDQ---------AIECYKK 510
Query: 363 PVQIEPPIAWA----GFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVN 418
++I+P A G + K + A + E++ A Q +
Sbjct: 511 AIEIDPNYHLAYYNCGISYASKKMVDEAIECYKKVLEINPQYLNASTNMGYLYSQQKMYD 570
Query: 419 VAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
A EC +AL+ + + I NL AYY + H + + ++V+ +
Sbjct: 571 KAIECYQSALQVNENSLKILNNLGYAYYKSNMHDQAIEIYKRVIQI 616
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 62/317 (19%), Positives = 131/317 (41%), Gaps = 50/317 (15%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
K +++ + ++ V +N +GL+ ++ L +DPN I N G+AY Q
Sbjct: 1327 KRALEINPKEIVAYNNIGLVYYNLKNSDQALEYYKKALEIDPNYELSIYNSGLAYEQKNQ 1386
Query: 216 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 275
E++ K + + + N +L L + K S+ N + + Q+
Sbjct: 1387 NEEALKYYNKVQQINPNEKKSL-----LRIQKINSL------NENFDSKIQQS------- 1428
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 335
++ +P+ A + YY+ S +CL+K+ +L+P Y A ++
Sbjct: 1429 ------IENNPQTAKDYYKQGFLYYVQMQDDKSIECLKKSVELDP-----LYFEAYDKLG 1477
Query: 336 DAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEE-- 393
+ ++ E E +E ++I P + +++ + + E E +E
Sbjct: 1478 FVYQQKKMYE-------EALEYFKEA--IKINPK-CFNSISSIMRIYLEQKKIDEAKEYH 1527
Query: 394 ---NELSKMEECAGAGE---SAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYL 447
NE++ +CA + + + DQ V+ A C A++ +P++ + L N+Y
Sbjct: 1528 KMINEMNP--DCAQTQQELGTVYQDQ-KMVDEAIACYQKAIELNPQSTSAYIELGNSYLG 1584
Query: 448 TGDHRSSGKCLEKVLMV 464
+ + +C +KVL +
Sbjct: 1585 KVMYDKALECYKKVLEI 1601
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 68/174 (39%), Gaps = 22/174 (12%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E+ K+ ++ DT+Q V +N +GL+ + ++ L ++P + N G+
Sbjct: 1865 EVFQKI---LEIDTKQVVAYNNIGLVYYNQKKDDLALEYYQKALEINPKYLLSLYNSGLV 1921
Query: 210 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 269
Y +++ +C+Q + + N L L L G D+
Sbjct: 1922 YETKNQNDKALECYQKALDINPNDKQTLDRMMKLFL--------------KTGIIKDEFD 1967
Query: 270 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
N L ++ + ++A+ + +Y S KCL KA +++PN
Sbjct: 1968 VDN-----FLQKMEKNTQSAYDFYKQGYTFYSKKMKDQSIKCLNKAIEIDPNFF 2016
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 61/311 (19%), Positives = 119/311 (38%), Gaps = 44/311 (14%)
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
L+++++ D ++ LGLI + G +I L ++P D I ++ YF
Sbjct: 1190 LQKAIEIDPNYYEAYDKLGLIYGEKGMFDEAIQNYLKALEINPKFFDIIPSIMNIYFDQN 1249
Query: 215 DMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 274
+E++ + Q ++ + N L G + ++ A
Sbjct: 1250 RIEEAKEFHQKIVDLNPNCTETLYEL---------------------GEVYQDQNMIDEA 1288
Query: 275 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRI 334
EC LK DP+ L N Y D+ + +C ++A ++ P + VA + I
Sbjct: 1289 FECYQKILKIDPQYIDAHIELGNIYLDKHDNDQALECYKRALEINP-----KEIVAYNNI 1343
Query: 335 KDAERSQEPTEQ-LSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEE 393
+ + ++Q L + + E DP E I +G A QK +E A + +
Sbjct: 1344 GLVYYNLKNSDQALEYYKKAL-----EIDP-NYELSIYNSGLAYEQKNQNEEALKYYNKV 1397
Query: 394 NELSKMEECAGAGESAFLDQASAVNVAKEC----LLAALKADPKAAHIWANLANAYYLTG 449
+++ E L + +N E + +++ +P+ A + YY+
Sbjct: 1398 QQIN-------PNEKKSLLRIQKINSLNENFDSKIQQSIENNPQTAKDYYKQGFLYYVQM 1450
Query: 450 DHRSSGKCLEK 460
S +CL+K
Sbjct: 1451 QDDKSIECLKK 1461
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 68/156 (43%), Gaps = 23/156 (14%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P+ A++ L ++YQ + +A+ Y+K ++ P+ HA L
Sbjct: 719 PEYVQAYYYLAIIYQNTNRVDEAIDYYQKVIQL---------DPQ--------HADAYL- 760
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
G+ L K L + LE ++++ + ++ +N +G I + ++
Sbjct: 761 -ELGNKYLHKNLTDKALE----CFYKTIEIEPKKYDAYNGVGAIFYAQKKDDQALEYFKK 815
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
L ++PN I N G+ Y Q G E++ +C++ +I
Sbjct: 816 ALEINPNYILSIYNSGLIYEQKGQSEKALECYKKVI 851
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 73/172 (42%), Gaps = 22/172 (12%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
PK+ A++ +G+ YQ +A+ Y+K EEI + R L ++ + +
Sbjct: 618 PKSFLANYNIGVAYQMKNMFDEAIEFYKKVEEIFPKYFTVFIR-----LGNVYGEKKMYE 672
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVV----------------WNTLGLI 175
E+ + + K+ E+LEEI S L+ + + + V+ + L +I
Sbjct: 673 EALENYNKVKDFSMEKLEEI-SNLENVDKMNLIEEVIGCYIKAIELNPEYVQAYYYLAII 731
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
+ R+ +I ++ +DP + D LG Y +++ +CF I
Sbjct: 732 YQNTNRVDEAIDYYQKVIQLDPQHADAYLELGNKYLHKNLTDKALECFYKTI 783
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 76/180 (42%), Gaps = 38/180 (21%)
Query: 63 GLVHVARKM---------------PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLR 107
GLVH + M PK + + GL+Y++ Q KA+ Y+K I
Sbjct: 1613 GLVHYNQNMDDLALEYYNKALEVNPKYELSIYNSGLIYEQKNQNDKALECYKKVLAINPT 1672
Query: 108 CEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAV 167
+ + R E ++ + +++ +L ++LEE L K+ + + QA
Sbjct: 1673 DKKTLTRIEKIN----------------EKNVNLKLSEKDLEEKLQKVPVTAKDHLEQAF 1716
Query: 168 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
++ T+ +++ SI +L + +DPN D LG+ Y Q E + + ++ I
Sbjct: 1717 LYLTIK-------KVEQSIELLKKAIEIDPNYYDAYDKLGLIYKQKEMFEDAIQNYEKAI 1769
>gi|325187990|emb|CCA22532.1| predicted protein putative [Albugo laibachii Nc14]
Length = 968
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 110/296 (37%), Gaps = 65/296 (21%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
+ LG L +SGRLQ SI+V + + P+ GNL AY+ SG M+ + F+ IL
Sbjct: 245 YTNLGNALRESGRLQDSINVYKKAIRIRPDFATAHGNLASAYYDSGQMDLAILTFRQAIL 304
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ N P A N L A G+ LDQ+ C AL+
Sbjct: 305 LEPNFPDAYNN------------LGNALREMGQ---LDQSIL------CYRTALRLKSDH 343
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLS 348
H + NL NA G + + C AA+L P+ A A S + + Q EQ
Sbjct: 344 PHAYNNLGNALKDKGMIKEAIHCYSTAARLMPHL-----AAAYSNLGSVLKEQGKLEQ-- 396
Query: 349 WAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGES 408
++ + I+P A AF N M
Sbjct: 397 -------ALAHYQQAITIDP---------------RFADAFSNMGNVFKDMNR------- 427
Query: 409 AFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
LD + +C A++ P+ ++NLA+AY G R + C K L +
Sbjct: 428 --LDDSI------QCYTTAIRLKPEFTDAYSNLASAYKDGGQLREAIACYRKALFL 475
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
E +LE+ L+ ++++ D R A ++ +G + RL SI ++ + + P D
Sbjct: 390 EQGKLEQALAHYQQAITIDPRFADAFSNMGNVFKDMNRLDDSIQCYTTAIRLKPEFTDAY 449
Query: 204 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY--AALLLCKY 248
NL AY G + ++ C++ + N P A NY + + +C +
Sbjct: 450 SNLASAYKDGGQLREAIACYRKALFLRPNFPDAFANYFHSMVFICDW 496
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 85/225 (37%), Gaps = 47/225 (20%)
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
E L++ ++ K++++ A L SG++ +I + ++PN D
Sbjct: 254 ESGRLQDSINVYKKAIRIRPDFATAHGNLASAYYDSGQMDLAILTFRQAILLEPNFPDAY 313
Query: 204 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY-------------------AALL 244
NLG A + G ++QS C++ + +HP A N AA L
Sbjct: 314 NNLGNALREMGQLDQSILCYRTALRLKSDHPHAYNNLGNALKDKGMIKEAIHCYSTAARL 373
Query: 245 LCKYGSVLAGAGANTGEGACLDQASAV-------------------NVAK---------E 276
+ + + G+ E L+QA A NV K +
Sbjct: 374 MPHLAAAYSNLGSVLKEQGKLEQALAHYQQAITIDPRFADAFSNMGNVFKDMNRLDDSIQ 433
Query: 277 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
C A++ P+ ++NLA+AY G R + C KA L PN
Sbjct: 434 CYTTAIRLKPEFTDAYSNLASAYKDGGQLREAIACYRKALFLRPN 478
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 115/281 (40%), Gaps = 51/281 (18%)
Query: 179 SGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALI 238
+G Q +IS+ L VD + + + LG A+FQSG+ +S Q I D A
Sbjct: 51 NGYYQETISLCEYLYEVDMYHTNNLLLLGAAHFQSGNFAESIYYNQQCIRLDPQFAEA-- 108
Query: 239 NYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANA 298
YG++ G L + + A + A++ P+ + + NLA +
Sbjct: 109 ---------YGNL----------GNALKETGDIVGAIHFYVKAIQLHPRFSDAYNNLAVS 149
Query: 299 YYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASIL 358
Y G + + + + A L+P+ + A S + + ++Q E + S
Sbjct: 150 YMQIGQWQQAIETYKTALTLDPSLVD-----AHSNLGNLYKAQGMYE-------DAKSCF 197
Query: 359 REGDPVQIEPP--IAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGA--------GES 408
D ++++P IAW+ A V + ++ AA + + + A ES
Sbjct: 198 --TDAIRVKPTFAIAWSNLAGVYQHSGQLDAAIIHYQEAIRLAPDFVDAYTNLGNALRES 255
Query: 409 AFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTG 449
L ++NV K+ A++ P A NLA+AYY +G
Sbjct: 256 GRLQ--DSINVYKK----AIRIRPDFATAHGNLASAYYDSG 290
>gi|220922402|ref|YP_002497704.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
gi|219947009|gb|ACL57401.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
Length = 818
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 88/411 (21%), Positives = 157/411 (38%), Gaps = 56/411 (13%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
PK+A A+ GL + R G+ +A++ Y++A LR + A + H
Sbjct: 57 PKSAVAYTHRGLAFYRKGEYDRAIADYDQA----LRLDPKSA------VAYTHRGLAFYR 106
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+ E + ++ ++++ D + A ++ GL + G +I+
Sbjct: 107 KG-------------EYDRAIADYDQALRLDPKYANIYINRGLAFYRKGEYDRAIADYDQ 153
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK--YG 249
L +D + N G A+ G+ +++ + + + +P A N K Y
Sbjct: 154 ALRLDLRDAVVYTNRGDAFRSKGEYDRAIADYDQALRFNPKYPYAYRNRGDTFQSKGEYD 213
Query: 250 SVLAG-----------AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANA 298
+A A A T G S + A AL+ DPK A+I+ N A
Sbjct: 214 RAIADYDQALRLNPEDAAAYTHRGLAFQSKSEYDRAIADYDQALRLDPKYANIYINRGYA 273
Query: 299 YYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASIL 358
+ G++ + ++A +L+P + +A + DA RS+ G +I
Sbjct: 274 FRSKGEYNRAIADFDQALRLDPKSV-----IAYTGRGDAFRSK---------GENDRAIA 319
Query: 359 REGDPVQIEPPIAWA----GFAAVQKTHHEVAAAFETEENELSKMEECAGAGES-AFLDQ 413
++ P A+A G A K ++ A A T+ L A AF D+
Sbjct: 320 DYDQALRFNPKYAYAYRNRGDAFRNKGEYDRAIADYTQALRLDPQSATAYNNRGLAFQDK 379
Query: 414 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
+ A AL+ DPK A + N A+Y G+H + E+ L +
Sbjct: 380 GE-YDRAIADYDQALRLDPKDAAAYTNRGAAFYRKGEHDRAIADYEEALRL 429
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/187 (17%), Positives = 73/187 (39%), Gaps = 13/187 (6%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
E + ++ ++++ D + AV + GL + G +I+ L +DP + +
Sbjct: 41 EYDRAIADYDQALRLDPKSAVAYTHRGLAFYRKGEYDRAIADYDQALRLDPKSAVAYTHR 100
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK--YGSVLA----------- 253
G+A+++ G+ +++ + + D + IN K Y +A
Sbjct: 101 GLAFYRKGEYDRAIADYDQALRLDPKYANIYINRGLAFYRKGEYDRAIADYDQALRLDLR 160
Query: 254 GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
A T G + A AL+ +PK + + N + + G++ + +
Sbjct: 161 DAVVYTNRGDAFRSKGEYDRAIADYDQALRFNPKYPYAYRNRGDTFQSKGEYDRAIADYD 220
Query: 314 KAAKLEP 320
+A +L P
Sbjct: 221 QALRLNP 227
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 68/174 (39%), Gaps = 21/174 (12%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
E + ++ ++++ D + A +N GL G +I+ L +DP + N
Sbjct: 347 EYDRAIADYTQALRLDPQSATAYNNRGLAFQDKGEYDRAIADYDQALRLDPKDAAAYTNR 406
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G A+++ G+ +++ +++ + D AA G GA L+
Sbjct: 407 GAAFYRKGEHDRAIADYEEALRLDPKSAAAY---------------------NGRGAALN 445
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
+ + A L AL+ P + + A+ GD + L +A +L P
Sbjct: 446 KKGDYDRAIADLDQALRLKPGFTNPHYHRGMAFRHKGDLDRALADLNEAVRLNP 499
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 59/303 (19%), Positives = 112/303 (36%), Gaps = 39/303 (12%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
A + G G +I+ L +DP + + G+A+++ G+ +++ +
Sbjct: 26 ATDYYNRGDAFRSKGEYDRAIADYDQALRLDPKSAVAYTHRGLAFYRKGEYDRAIADYDQ 85
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 285
+ D P + + Y T G + + A AL+ D
Sbjct: 86 ALRLD---PKSAVAY------------------THRGLAFYRKGEYDRAIADYDQALRLD 124
Query: 286 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTE 345
PK A+I+ N A+Y G++ + ++A +L+ R AV + DA RS+
Sbjct: 125 PKYANIYINRGLAFYRKGEYDRAIADYDQALRLD-----LRDAVVYTNRGDAFRSK---- 175
Query: 346 QLSWAGNEMASILREGDPVQIEPPIAWA----GFAAVQKTHHEVAAAFETEENELSKMEE 401
G +I ++ P +A G K ++ A A + L+ +
Sbjct: 176 -----GEYDRAIADYDQALRFNPKYPYAYRNRGDTFQSKGEYDRAIADYDQALRLNPEDA 230
Query: 402 CAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
A S + A AL+ DPK A+I+ N A+ G++ + ++
Sbjct: 231 AAYTHRGLAFQSKSEYDRAIADYDQALRLDPKYANIYINRGYAFRSKGEYNRAIADFDQA 290
Query: 462 LMV 464
L +
Sbjct: 291 LRL 293
>gi|291288388|ref|YP_003505204.1| hypothetical protein Dacet_2488 [Denitrovibrio acetiphilus DSM
12809]
gi|290885548|gb|ADD69248.1| Tetratricopeptide TPR_2 repeat protein [Denitrovibrio acetiphilus
DSM 12809]
Length = 510
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 21/190 (11%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
E L +K+++ D V N LG I ++G+ + + LSS + PN D NLG+
Sbjct: 57 ESALELMKQAVSLDKTNPVFHNNLGEIYRQTGQFEHAEFHLSSAAELKPNYSDAFSNLGL 116
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
Y + G + + CF + + D + +ALIN L EG+ D
Sbjct: 117 LYKERGLVNDAKYCFAEALQSDPKNLSALINTGNLF--------------NSEGSYED-- 160
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 328
A +C AAL+ P + A+ AYY TG++ +S K + P R
Sbjct: 161 -----AIQCYEAALEISPDNPNALASAGAAYYKTGEYNTSAKYYSRLVNGHPELHRDRVN 215
Query: 329 VAVSRIKDAE 338
+A+ +++ +
Sbjct: 216 LALITLRNKD 225
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 21/163 (12%)
Query: 159 MQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQ 218
++ D A + LGLI + +G+ +S++ ++ +++D N NLG Y Q+G E
Sbjct: 33 LEVDRHNADAMHYLGLIHIANGKTESALELMKQAVSLDKTNPVFHNNLGEIYRQTGQFE- 91
Query: 219 SAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECL 278
H ++ AA L Y + G + VN AK C
Sbjct: 92 --------------HAEFHLSSAAELKPNYSDAFSNL------GLLYKERGLVNDAKYCF 131
Query: 279 LAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
AL++DPK N N + G + + +C E A ++ P+
Sbjct: 132 AEALQSDPKNLSALINTGNLFNSEGSYEDAIQCYEAALEISPD 174
>gi|386813873|ref|ZP_10101097.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403370|dbj|GAB63978.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 576
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 109/264 (41%), Gaps = 44/264 (16%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A A+F LGL+Y + AVSS E+A ++ IA A L
Sbjct: 293 PDFAEAYFNLGLIYSEENKTKDAVSSLEQA----IKLNPKIAE-----------AHFTLG 337
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
E N + EE LS+ K+++ S A + + G SI+ S
Sbjct: 338 EIYTKNDMQ--------EEALSEYKKAIDSKPDYAEAYYNYAELNATKGMHDRSIAAWSK 389
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 251
+ ++PNN D NLGIAY+ GD++++ + +I + N ALIN
Sbjct: 390 TIELNPNNTDAYFNLGIAYYNQGDLDKAISLWIKVIEINPNDYDALIN------------ 437
Query: 252 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 311
LA A G LD+ + + P A ++ L NAY + ++
Sbjct: 438 LADAYNAKG---LLDKTI------QTWEKITEVYPNHAGLYYKLGNAYAKKNMYNTALVQ 488
Query: 312 LEKAAKLEPNCMSTRYAVAVSRIK 335
EKA +++PN ++ Y + ++ K
Sbjct: 489 WEKAIEIDPNLVNAYYNLGLTYQK 512
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 137/337 (40%), Gaps = 51/337 (15%)
Query: 21 CRSRISSKMDSALEFG--VDADGDQSGLGTSSSSREEKVSSLKTGLVH--------VARK 70
CR+ +++++ + G A +G T + +S K G++ + K
Sbjct: 23 CRTPHYTEVENKTKKGYLTSATDKIAGANTPEQHKVIGISYFKKGMIDESLEELKLASEK 82
Query: 71 MPKNAHAHFLLGLMYQRLGQP-------LKAVSSY------EKAE---EILLRCEADIAR 114
+ ++A H LG +Y +P L AVS Y EKA+ ++ L + A
Sbjct: 83 IQEDAELHHYLGKIYYDNNKPDEAIAELLAAVSYYKITQTAEKADAYNDLGLAYKDKNAF 142
Query: 115 PELLSLVQIHHAQCLLPESSGDNSLDKELEPEE--LEEILSKLKESMQSDTRQAVVWNTL 172
E SL + L P ++ N L ++ L++ ++ LK+S++ D + A TL
Sbjct: 143 SE--SLTAFKESLELNPSATDTNYHVGLLYYKKNMLDDSITYLKKSIKLDLKNADAHFTL 200
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
GL+ + S + ++ + + LG+ Y+Q GD+E+S + +L DQN
Sbjct: 201 GLVYYTKSLYDKATSEFKQTIELNSKDAEAHNYLGLLYYQQGDLEESIAEHKAALLSDQN 260
Query: 233 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 292
+P A N L K NT + A++ K+ L+ P A +
Sbjct: 261 YPDAYNNLGIALYAK---------NNTKD--------AIDAFKKT----LELQPDFAEAY 299
Query: 293 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAV 329
NL Y + + LE+A KL P + +
Sbjct: 300 FNLGLIYSEENKTKDAVSSLEQAIKLNPKIAEAHFTL 336
>gi|113474349|ref|YP_720410.1| hypothetical protein Tery_0481 [Trichodesmium erythraeum IMS101]
gi|110165397|gb|ABG49937.1| TPR repeat [Trichodesmium erythraeum IMS101]
Length = 3145
Score = 62.8 bits (151), Expect = 4e-07, Method: Composition-based stats.
Identities = 56/250 (22%), Positives = 105/250 (42%), Gaps = 44/250 (17%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P N+ +F LG + G KA + Y+KA + + D A Q H+ L+
Sbjct: 1126 PNNSQGNFNLGFAWAEKGDLSKASTYYQKA----INLQPDYA--------QAHNNLGLIF 1173
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+ G+ L + + +++++ + A W LG+ILLK G+++ +I
Sbjct: 1174 QEKGN-----------LSKASNYYQQALEINPNYAEAWCNLGVILLKQGQIELAIEYFRK 1222
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 251
L ++P+ NLG + + G++ +++ +Q + + N+ A C G V
Sbjct: 1223 SLELNPDYAQAYNNLGFVFQEKGNLSKASNYYQQALEINPNYAEA--------WCNLGVV 1274
Query: 252 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 311
L G + +A E +L+ +P A +L + G+ +S
Sbjct: 1275 LRKQG-------------QIELAIEYFRKSLELNPDYAMTHNSLGVTFEEEGNFTASIAS 1321
Query: 312 LEKAAKLEPN 321
+KA +LEPN
Sbjct: 1322 YQKALELEPN 1331
Score = 54.7 bits (130), Expect = 9e-05, Method: Composition-based stats.
Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 26/189 (13%)
Query: 67 VARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHA 126
+ ++ P N LLGL + Q +A++ Y+K+ + V ++A
Sbjct: 36 IIKRQPNNFLVLELLGLCAYKNNQIEQAIAYYQKSLK-----------------VNYNYA 78
Query: 127 QCLLPESSGDNSLDKELEP-EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSS 185
+ N+L L+ ++++ L K +++ A W+ LGLIL G+ +++
Sbjct: 79 ET-------HNNLAVALQDNQQIDAALRHCKIAIKLCPNYAEAWHNLGLILRDKGQFEAA 131
Query: 186 ISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL 245
I L + PNN + +LG + G + +S K +Q+ + D+N+ A AA+LL
Sbjct: 132 IEHYQKSLEIKPNNAEVYHSLGTISLELGKLSESQKYYQEALKLDKNYLNAHFGLAAVLL 191
Query: 246 CKYGSVLAG 254
K GS++ G
Sbjct: 192 -KQGSLMQG 199
Score = 53.1 bits (126), Expect = 3e-04, Method: Composition-based stats.
Identities = 43/200 (21%), Positives = 93/200 (46%), Gaps = 16/200 (8%)
Query: 137 NSLDKELEPE-ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAV 195
++L K ++ E LEE ++ ++++ + + ++ LG I L+ G+++S+I + +
Sbjct: 1065 SNLAKLMKKEGRLEEAIAHYQKAISLEPNNSSNYSNLGFIFLEKGQIESAIINSEKSIEI 1124
Query: 196 DPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGA 255
+PNN NLG A+ + GD+ +++ +Q I ++ A N L+ + G++ +
Sbjct: 1125 NPNNSQGNFNLGFAWAEKGDLSKASTYYQKAINLQPDYAQAH-NNLGLIFQEKGNLSKAS 1183
Query: 256 ---------GANTGEGAC-----LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYL 301
N E C L + + +A E +L+ +P A + NL +
Sbjct: 1184 NYYQQALEINPNYAEAWCNLGVILLKQGQIELAIEYFRKSLELNPDYAQAYNNLGFVFQE 1243
Query: 302 TGDHRSSGKCLEKAAKLEPN 321
G+ + ++A ++ PN
Sbjct: 1244 KGNLSKASNYYQQALEINPN 1263
Score = 39.3 bits (90), Expect = 4.1, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
+++++ A W LG IL K G+ + +I L ++P+ + +LG +FQ G
Sbjct: 1804 QKAIEIHPNHAEAWCRLGNILQKQGQFELAIEYCQKSLELNPDYIEANHSLGYIFFQLGK 1863
Query: 216 MEQSAKCFQDLILK--------DQNHPAALINYAALLLCKYGSVLAG 254
+ +S K ++ I K + NH A A LL K G+ + G
Sbjct: 1864 LAESQKYYEQAIKKYYEQAIELNTNHVNAHFGLANALL-KQGNFIPG 1909
Score = 38.9 bits (89), Expect = 6.5, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 137 NSLDKELEPE-ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAV 195
++L K ++ E LEE ++ +++++ + + +++LG I L+ G++ +I +
Sbjct: 1716 SNLAKLMKKEGRLEEAIAHYQKAIELEPNNSSNYSSLGWIFLQKGQIDLAIINYKKSRKI 1775
Query: 196 DPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGA 255
+PN+ NLG + ++G++ ++ +Q I NH A C+ G++L
Sbjct: 1776 NPNSSWININLGFVWEKNGNLPKANTYYQKAIEIHPNHAEA--------WCRLGNILQKQ 1827
Query: 256 G 256
G
Sbjct: 1828 G 1828
>gi|312137039|ref|YP_004004376.1| hypothetical protein Mfer_0815 [Methanothermus fervidus DSM 2088]
gi|311224758|gb|ADP77614.1| Tetratricopeptide TPR_2 repeat protein [Methanothermus fervidus DSM
2088]
Length = 225
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Query: 175 ILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP 234
+LL GR ++ + + +L DP+NC+ + N GIA G E+S + F D +LK +N
Sbjct: 12 LLLNMGRFSDALYLYNKVLEEDPDNCEALNNSGIALLFLGKYEESIQYF-DEVLKIKNDS 70
Query: 235 AALINYAALL--LCKYGSVL--------------AGAGANTGEGACLDQASAVNVAKECL 278
A IN + L L +Y + A +G L + A +C
Sbjct: 71 GAWINKSNALINLGRYEEAIECCDRALEIAINDSEKVYALVNKGNALFSIDEYDEALDCY 130
Query: 279 LAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 327
ALK +P IW N N G + + +C +KA +++P + + Y
Sbjct: 131 DEALKINPNDVGIWNNKGNLLKSMGKYEEAIECFDKALEIDPRSIGSWY 179
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 40/82 (48%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
+E +E L E+++ + +WN G +L G+ + +I L +DP + N
Sbjct: 121 DEYDEALDCYDEALKINPNDVGIWNNKGNLLKSMGKYEEAIECFDKALEIDPRSIGSWYN 180
Query: 206 LGIAYFQSGDMEQSAKCFQDLI 227
+A G+ E++ KC +++I
Sbjct: 181 KSLALEALGEYEEALKCIENVI 202
>gi|451947622|ref|YP_007468217.1| tetratricopeptide repeat protein [Desulfocapsa sulfexigens DSM
10523]
gi|451906970|gb|AGF78564.1| tetratricopeptide repeat protein [Desulfocapsa sulfexigens DSM
10523]
Length = 215
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 20/187 (10%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E+L ++++L++ + + V + LGL+ LKSGR+ +I L L +D + N
Sbjct: 12 EDLPTVIAELEKKCKQNPDNVVTLHHLGLVYLKSGRIDEAIECLEKCLVIDEQANQPMIN 71
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
LG YF G++++ A+ ++ +K Q A A+ G
Sbjct: 72 LGAIYFGQGNLDK-AQELNEMAIKVQPD-------------------TSAQAHANLGLIW 111
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
Q + ++ + A++ DPK A +W NL + + G+ + K KA +LEP+
Sbjct: 112 QQRNELDKSIASYEKAIQYDPKLATVWMNLTSVLTMKGEDDRALKAATKATQLEPDSALA 171
Query: 326 RYAVAVS 332
+ +AV+
Sbjct: 172 QNNLAVA 178
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 74/164 (45%), Gaps = 22/164 (13%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 128
++ P N LGL+Y + G+ +A+ EK L + +P +++L I+ Q
Sbjct: 26 KQNPDNVVTLHHLGLVYLKSGRIDEAIECLEKC----LVIDEQANQP-MINLGAIYFGQG 80
Query: 129 LLPESSGDNSLDKELEPE-----------------ELEEILSKLKESMQSDTRQAVVWNT 171
L ++ N + +++P+ EL++ ++ ++++Q D + A VW
Sbjct: 81 NLDKAQELNEMAIKVQPDTSAQAHANLGLIWQQRNELDKSIASYEKAIQYDPKLATVWMN 140
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
L +L G ++ + ++P++ NL +A F SGD
Sbjct: 141 LTSVLTMKGEDDRALKAATKATQLEPDSALAQNNLAVALFFSGD 184
>gi|398805152|ref|ZP_10564133.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Polaromonas sp. CF318]
gi|398092314|gb|EJL82729.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Polaromonas sp. CF318]
Length = 759
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 112/286 (39%), Gaps = 32/286 (11%)
Query: 64 LVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLV-- 121
+ R P +A AHF LG + RL Q A SSY +A L + D A EL
Sbjct: 50 FMKAVRYKPDSAGAHFNLGATHARLDQHEAAASSYREA----LALKPDFAEAELALGAAL 105
Query: 122 -----------QIHHAQCLLPE-SSGDNSLDKELEP-EELEEILSKLKESMQSDTRQAVV 168
HA L P + D+ L L E EE+ + ++++ A
Sbjct: 106 EELGQDEAAAESYRHALELQPSYADADDKLVNLLRRLERFEELADTYRRMLETNPHNADW 165
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
N LG + K GR + S + +A DP++ NLG G + ++ C++ +
Sbjct: 166 LNNLGAVQRKLGRFKDSAASFRRAVAADPDDALAHNNLGATLRTLGQLTEAVDCYRQALK 225
Query: 229 KDQNHPAALINYAALL--LCKYGSVLAG-----------AGANTGEGACLDQASAVNVAK 275
N A N LL L + S +A A + T GA L + A
Sbjct: 226 IRPNFIEAHHNLGNLLAELGQADSAVASYREALEINPDFAESLTAMGAVLQTRGQFDEAV 285
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
EC AL P A +NL NA G SS K +A +L+P+
Sbjct: 286 ECHRRALAIKPDYAQAHSNLGNALQDLGQLESSLKSTRRALELQPD 331
>gi|386000858|ref|YP_005919157.1| hypothetical protein Mhar_0143 [Methanosaeta harundinacea 6Ac]
gi|357208914|gb|AET63534.1| TPR repeat-containing protein [Methanosaeta harundinacea 6Ac]
Length = 609
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E + E+++ D A WN GL L G SI + +DP N GIA
Sbjct: 41 EAVQAYDEAIRLDPEYASAWNNKGLALDYQGNYDESIKAYDEAIRLDPEFAAAWNNKGIA 100
Query: 210 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 269
G+ ++ +CF + I D + A N G L+ G TG D+
Sbjct: 101 LGNQGNYTEATRCFDEAIRLDPEYAGAWYN--------KGKALSERGNYTGAILAYDE-- 150
Query: 270 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAV 329
A++ DP+ A W +A + G++ + + ++A +L+P +T Y
Sbjct: 151 -----------AIRLDPELAAAWHKKGDALFERGNYTEAIQAFDEAIRLDPEDATTWYNK 199
Query: 330 AVS 332
V+
Sbjct: 200 GVA 202
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 76/174 (43%), Gaps = 27/174 (15%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E + E+++ D AV W+ G +L G+ +I + + PN D N G A
Sbjct: 279 EAIQAFDEAIRLDPELAVAWSNKGTVLADQGKYDEAIQAYDEAIRLHPNYVDAWINKGSA 338
Query: 210 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 269
++ G+ ++ + + + I D ++ A+ G+ L+ G T
Sbjct: 339 LYEQGNYPEAIQAYDEAIRLDPDN--------AMTWYNKGNALSELGNYT---------- 380
Query: 270 AVNVAKECLLA---ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
E +LA A++ DP+ A +W + N++ + G + + + ++A +L+P
Sbjct: 381 ------EGILAYDEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDP 428
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/320 (19%), Positives = 121/320 (37%), Gaps = 41/320 (12%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E + E+++ D A WN G L + G+ +I L + +DP + N G
Sbjct: 211 EAIPAYDEAIRLDPEDADAWNNRGNALNELGKYDEAIHALDKAIELDPEDAAPWNNKGKP 270
Query: 210 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 269
+ G+ ++ + F + I D A+ G+VLA G
Sbjct: 271 LWMKGNYTEAIQAFDEAIRLDPE--------LAVAWSNKGTVLADQG------------- 309
Query: 270 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAV 329
+ A + A++ P W N +A Y G++ + + ++A +L+P+ T Y
Sbjct: 310 KYDEAIQAYDEAIRLHPNYVDAWINKGSALYEQGNYPEAIQAYDEAIRLDPDNAMTWYNK 369
Query: 330 AVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIA--WAGFA---AVQKTHHE 384
+ LS GN IL + ++++P A W +Q + E
Sbjct: 370 GNA--------------LSELGNYTEGILAYDEAIRLDPEEADVWVSKGNSFRMQGKYDE 415
Query: 385 VAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANA 444
A++ E L E + + A + A++ DP+ A +W + N+
Sbjct: 416 AIQAYD-EAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEEADVWVSKGNS 474
Query: 445 YYLTGDHRSSGKCLEKVLMV 464
+ + G + + + ++ + +
Sbjct: 475 FRMQGKYDEAIQAYDEAIRL 494
>gi|386001554|ref|YP_005919853.1| putative membrane protein, containing TPR repeats [Methanosaeta
harundinacea 6Ac]
gi|357209610|gb|AET64230.1| putative membrane protein, containing TPR repeats [Methanosaeta
harundinacea 6Ac]
Length = 463
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 131/349 (37%), Gaps = 55/349 (15%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
EE L+ S++ D A WN G++L GR ++ L VDP N G
Sbjct: 83 EEALACYNRSLEIDPDYAPAWNNRGVVLEALGRGDEALESYDRALEVDPAYALAWSNQGG 142
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
++ GD +S +C++ + D A N G L A
Sbjct: 143 VFYSRGDYNRSIECYERALEIDPRSREAWNNL---------------------GRSLFAA 181
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY- 327
+ E ALK DP A W N A G H+ + C E+A K+EP+ + Y
Sbjct: 182 GEYERSIEGYDEALKIDPLYATAWNNKGIALGTLGRHQEALDCYEEALKIEPSHVMALYN 241
Query: 328 -AVAVSRIKDAERSQE---------PTEQLSWA---------GNEMASILREGDPVQIEP 368
+A+ + E + E P+ +W G + + + ++++P
Sbjct: 242 KGIALGLLGRQEEAVECYDAVLKVDPSYPPAWYNRGVALGLLGRQEQAAASYDEALKLDP 301
Query: 369 PIAWAGFAAVQKTHHEVAAAFETEENELSKME---ECAGAGESAFLDQA---SAVNVAKE 422
G+A + +E L + E A A+ +Q SA+ +E
Sbjct: 302 -----GYAQAWNNRGIALGSLGRQEEALQSYQRALEIDPAYSQAWYNQGVAFSALGRYQE 356
Query: 423 CLLA---ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMVYCSS 468
+ + AL+ DP+ + W N A G H+ + +C E+ L V +S
Sbjct: 357 AISSYDRALELDPELSEAWNNKGIALSALGRHQEAIECYERALEVGLAS 405
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 121/312 (38%), Gaps = 50/312 (16%)
Query: 11 EGKKINKLGKCRSRISSKMDSALEFGVDAD--GDQSGLGTSSSSREEKVSSLKTGLVHVA 68
+G +++LG+ ++S D+ALE + + G+ S+ R E+ + + +
Sbjct: 38 KGVALSELGRYEEAVAS-YDNALELDPEYALAWNNKGIALSALGRNEEALACYNRSLEID 96
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 128
P A A G++ + LG+ +A+ SY++A E+ D A +L +
Sbjct: 97 ---PDYAPAWNNRGVVLEALGRGDEALESYDRALEV------DPA----YALAWSNQGGV 143
Query: 129 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 188
S GD + E + +++ D R WN LG L +G + SI
Sbjct: 144 FY--SRGDYNRSIEC-----------YERALEIDPRSREAWNNLGRSLFAAGEYERSIEG 190
Query: 189 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 248
L +DP N GIA G +++ C+++ + + +H AL N
Sbjct: 191 YDEALKIDPLYATAWNNKGIALGTLGRHQEALDCYEEALKIEPSHVMALYN--------- 241
Query: 249 GSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSS 308
+G L A EC A LK DP W N A L G +
Sbjct: 242 ------------KGIALGLLGRQEEAVECYDAVLKVDPSYPPAWYNRGVALGLLGRQEQA 289
Query: 309 GKCLEKAAKLEP 320
++A KL+P
Sbjct: 290 AASYDEALKLDP 301
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 13/167 (7%)
Query: 167 VVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDL 226
+ W G+ L + GR + +++ + L +DP N GIA G E++ C+
Sbjct: 33 LAWYNKGVALSELGRYEEAVASYDNALELDPEYALAWNNKGIALSALGRNEEALACYNRS 92
Query: 227 ILKDQNHPAALINYAALL---------LCKYGSVL----AGAGANTGEGACLDQASAVNV 273
+ D ++ A N +L L Y L A A A + +G N
Sbjct: 93 LEIDPDYAPAWNNRGVVLEALGRGDEALESYDRALEVDPAYALAWSNQGGVFYSRGDYNR 152
Query: 274 AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
+ EC AL+ DP++ W NL + + G++ S + ++A K++P
Sbjct: 153 SIECYERALEIDPRSREAWNNLGRSLFAAGEYERSIEGYDEALKIDP 199
>gi|118384080|ref|XP_001025193.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89306960|gb|EAS04948.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 658
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 137/343 (39%), Gaps = 51/343 (14%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
EE L K ++ ++R V +GL + GR+ +I V L ++P+ +C+ +L
Sbjct: 234 EEALILFKRCLEINSRNEVAHYNIGLEYIHQGRVDEAILVFLKSLDLNPSYEECLNSLAS 293
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVLAGAGANTGEGACLD 266
AY + G ME + + +Q + +QN+ AL N + C++
Sbjct: 294 AYEEKGMMEDAIETYQKCLQLNQNNEIALYNLGLIYKQQCQF------------------ 335
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
+ ++ K+C ++ +PK + L N+Y L G S + + KL PN S
Sbjct: 336 -SQSILYFKKC----IQINPKDPDYYNGLGNSYRLNGQLDDSIQTILICVKLNPNDDSYH 390
Query: 327 YAVAVSRIKDA---ERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQ---- 379
Y + ++ + E SQ ++ L + ++ G + A A VQ
Sbjct: 391 YNLGLAYYQKGCFLEASQYFSKSLEINPKDSQTLYHYGLCCYELEQLDKAVSAFVQSLEY 450
Query: 380 -----KTHHEVAAAFETEENELSKMEEC------AGAGESAFLD-------QASAVNVAK 421
T++ + A+ ++N++ + +C S + + Q ++
Sbjct: 451 DPKNENTYYNLGQAY-YDQNKIEESIQCFKICLEINPNNSLYYNSLGLCFCQKGQLDEGI 509
Query: 422 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
C +L +P + NL N Y L G+ S KC + L +
Sbjct: 510 ACFKKSLDINPSDENTLNNLGNTYRLKGNIEDSIKCYKVCLEI 552
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 90/192 (46%), Gaps = 12/192 (6%)
Query: 44 SGLGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEE 103
+GLG S + S++T L+ V + P + H+ LGL Y + G L+A + K+ E
Sbjct: 357 NGLGNSYRLNGQLDDSIQTILICV-KLNPNDDSYHYNLGLAYYQKGCFLEASQYFSKSLE 415
Query: 104 ILLRCEADIARPEL--LSLVQIHHA-----QCLLPESSGDNSL----DKELEPEELEEIL 152
I + + L L Q+ A Q L + +N+ + ++EE +
Sbjct: 416 INPKDSQTLYHYGLCCYELEQLDKAVSAFVQSLEYDPKNENTYYNLGQAYYDQNKIEESI 475
Query: 153 SKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQ 212
K ++ + ++ +N+LGL + G+L I+ L ++P++ + + NLG Y
Sbjct: 476 QCFKICLEINPNNSLYYNSLGLCFCQKGQLDEGIACFKKSLDINPSDENTLNNLGNTYRL 535
Query: 213 SGDMEQSAKCFQ 224
G++E S KC++
Sbjct: 536 KGNIEDSIKCYK 547
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 67/166 (40%), Gaps = 21/166 (12%)
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
+S++ + + + GL + +L ++S L DP N + NLG AY+
Sbjct: 410 FSKSLEINPKDSQTLYHYGLCCYELEQLDKAVSAFVQSLEYDPKNENTYYNLGQAYYDQN 469
Query: 215 DMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 274
+E+S +CF+ + + +P + Y +L G C Q ++
Sbjct: 470 KIEESIQCFKICL---EINPNNSLYYNSL------------------GLCFCQKGQLDEG 508
Query: 275 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
C +L +P + NL N Y L G+ S KC + ++ P
Sbjct: 509 IACFKKSLDINPSDENTLNNLGNTYRLKGNIEDSIKCYKVCLEINP 554
>gi|385809655|ref|YP_005846051.1| hypothetical protein IALB_1072 [Ignavibacterium album JCM 16511]
gi|383801703|gb|AFH48783.1| TPR repeat protein [Ignavibacterium album JCM 16511]
Length = 471
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 107/272 (39%), Gaps = 36/272 (13%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P+N A F LGL+YQR + +A+ +E+A ++ + D V++++
Sbjct: 139 PENEDAFFSLGLLYQRQFKYAEAIPYFERA----IKIDPD--------YVEVYYELGFCY 186
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
E+ N+ DK LE E + + D A W G+IL+K+G+L+ +++
Sbjct: 187 EAL--NNFDKALEAYE---------KFLDFDPYNASGWYNKGIILVKTGKLEEAVNCFDL 235
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL------- 244
+V + N G G +Q+ +CF +I D A N A++
Sbjct: 236 ATSVRDDFASAWYNKGNTLADLGKYQQAIECFHKVIEIDPYDETAFYNLASVYEEIGELQ 295
Query: 245 -LCKYGSVLAGAGANTGE-----GACLDQASAVNVAKECLLAALKADPKAAHIWANLANA 298
KY S + E G C D +A A+ W A+
Sbjct: 296 QAVKYYSKAIESDEEYFEAYLARGYCYDSLGKYQLALRDFNKAISISSDDPDAWRAKADL 355
Query: 299 YYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
Y G S K +AA+L+P+ Y +A
Sbjct: 356 EYSLGHLEESIKSYLEAARLQPDGYDIWYNLA 387
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 38/259 (14%)
Query: 71 MPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLL 130
P N+ G++ L + +A+ S+EKA LSL + + L+
Sbjct: 70 FPYNSELWLKKGILLNGLMKFEEAIDSFEKA----------------LSL-NPNDTETLV 112
Query: 131 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
+S+ + ++ + EE L++ + D + +LGL+ + + +I
Sbjct: 113 DKSAAEENMGLYQQAEE------SLRKVLDIDPENEDAFFSLGLLYQRQFKYAEAIPYFE 166
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 250
+ +DP+ + LG Y + +++ + ++ + D + + N ++L K G
Sbjct: 167 RAIKIDPDYVEVYYELGFCYEALNNFDKALEAYEKFLDFDPYNASGWYN-KGIILVKTGK 225
Query: 251 V--------LAG------AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 296
+ LA A A +G L A EC ++ DP + NLA
Sbjct: 226 LEEAVNCFDLATSVRDDFASAWYNKGNTLADLGKYQQAIECFHKVIEIDPYDETAFYNLA 285
Query: 297 NAYYLTGDHRSSGKCLEKA 315
+ Y G+ + + K KA
Sbjct: 286 SVYEEIGELQQAVKYYSKA 304
>gi|397780681|ref|YP_006545154.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
SEC [Methanoculleus bourgensis MS2]
gi|396939183|emb|CCJ36438.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC [Methanoculleus
bourgensis MS2]
Length = 276
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 114/299 (38%), Gaps = 52/299 (17%)
Query: 35 FGVDADGDQSGLGTSSSSREEKVSSLKTGLV--------HVARKMPKNAHAHFLLGLMYQ 86
FG D++G GT ++ + VS + G V + P+N G+ +
Sbjct: 8 FGKGEPEDRAGPGTDTAVSRQAVSLAQQGRFCEAIACFDRVLERDPENVKMWNNKGVFFD 67
Query: 87 RLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPE 146
LG+ +A++ +EKA I + D A P +S +H +
Sbjct: 68 LLGRDEEALACWEKALSI----DPDFA-PAWVSRGMLHRRR------------------N 104
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
L+E L ++ + AV W I RL +++ +LA+DP+ +L
Sbjct: 105 RLDEALVCYDRALALNPNSAVAWYNRSGIFTAMRRLDDAVACYERVLAIDPHFVAAWIDL 164
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G A F E++ C+ I D + + S+ GA GE
Sbjct: 165 GYARFLQHRHEEAITCYDRAIADDPEN------------VRVWSLRGGALYALGE---YR 209
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
QA A C L DP+ A W+ + Y G +R + C +KA ++ P+C T
Sbjct: 210 QALA------CFDRVLSLDPRYAAGWSMKCSVLYHLGMYRHALACADKALEINPSCELT 262
>gi|237833307|ref|XP_002365951.1| signal transduction protein, putative [Toxoplasma gondii ME49]
gi|211963615|gb|EEA98810.1| signal transduction protein, putative [Toxoplasma gondii ME49]
gi|221508918|gb|EEE34487.1| signal transduction protein, putative [Toxoplasma gondii VEG]
Length = 978
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 14/155 (9%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
A +WN G+ L GRLQ ++ L +DP N + + N+G+A + G++ Q+ + ++
Sbjct: 172 ADLWNCKGVTLRALGRLQEALDCCREALRLDPRNTNALNNIGVALKERGELLQAVEHYRA 231
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 285
++ + + P N A L T G L Q + A C AL AD
Sbjct: 232 SLVANPHQPTCRTNLAVAL--------------TDLGTKLKQEKKLQAALVCYTEALTAD 277
Query: 286 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
P A + NL + T D ++ + +A +L P
Sbjct: 278 PTYAPCYYNLGVIHAETDDPHTALQMYREATRLNP 312
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 30/199 (15%)
Query: 44 SGLGTSSSSRE---EKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEK 100
+ LGT + E + +S K L++ P + A++ LG+ Y L + KA+ +Y+
Sbjct: 360 TDLGTQQKASEGAKKAISLYKKALIY----NPYYSDAYYNLGVAYADLHKFDKALVNYQL 415
Query: 101 AEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQ 160
A RC E + + + H K+ E + + +
Sbjct: 416 AVAFNPRCA------EAYNNMGVIH---------------KDRENTDQATVYYNKALEIN 454
Query: 161 SDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSA 220
D Q + N LG++ +G++ ++ + V+PN + NLG+ Y GD+E S
Sbjct: 455 PDFSQTL--NNLGVLYTCTGKIGEALHFAKRAIEVNPNYAEAYNNLGVLYRDQGDIEDSV 512
Query: 221 KCFQDLILKDQNHPAALIN 239
K + +L D N P A N
Sbjct: 513 KAYDKCLLLDPNSPNAFHN 531
>gi|221488412|gb|EEE26626.1| signal transduction protein, putative [Toxoplasma gondii GT1]
Length = 978
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 14/155 (9%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
A +WN G+ L GRLQ ++ L +DP N + + N+G+A + G++ Q+ + ++
Sbjct: 172 ADLWNCKGVTLRALGRLQEALDCCREALRLDPGNTNALNNIGVALKERGELLQAVEHYRA 231
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 285
++ + + P N A L T G L Q + A C AL AD
Sbjct: 232 SLVANPHQPTCRTNLAVAL--------------TDLGTKLKQEKKLQAALVCYTEALTAD 277
Query: 286 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
P A + NL + T D ++ + +A +L P
Sbjct: 278 PTYAPCYYNLGVIHAETDDPHTALQMYREATRLNP 312
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 30/199 (15%)
Query: 44 SGLGTSSSSRE---EKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEK 100
+ LGT + E + +S K L++ P + A++ LG+ Y L + KA+ +Y+
Sbjct: 360 TDLGTQQKASEGAKKAISLYKKALIY----NPYYSDAYYNLGVAYADLHKFDKALVNYQL 415
Query: 101 AEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQ 160
A RC E + + + H K+ E + + +
Sbjct: 416 AVAFNPRCA------EAYNNMGVIH---------------KDRENTDQATVYYNKALEIN 454
Query: 161 SDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSA 220
D Q + N LG++ +G++ ++ + V+PN + NLG+ Y GD+E S
Sbjct: 455 PDFSQTL--NNLGVLYTCTGKIGEALHFAKRAIEVNPNYAEAYNNLGVLYRDQGDIEDSV 512
Query: 221 KCFQDLILKDQNHPAALIN 239
K + +L D N P A N
Sbjct: 513 KAYDKCLLLDPNSPNAFHN 531
>gi|348687602|gb|EGZ27416.1| hypothetical protein PHYSODRAFT_553979 [Phytophthora sojae]
Length = 986
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 121/319 (37%), Gaps = 65/319 (20%)
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
E +LE + +E+++ A ++ LG L ++GR++ +I S L + PN
Sbjct: 218 EDGQLEAAIDHYREAIRLAPDFADAYSNLGNALKEAGRVEEAIQAYKSALQIRPNFAIAH 277
Query: 204 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGA 263
GNL Y+ +G ME + F+ I + N P A N G
Sbjct: 278 GNLASCYYDAGQMELAIHTFRHAIQLEPNFPDAYNNL---------------------GN 316
Query: 264 CLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
L + + A C AL+ P H + NL NA G + + C AA+L P
Sbjct: 317 ALRECGQLEQAVTCYRTALQLKPDHPHAYNNLGNALKDKGLVKEALHCYTTAARLLP--- 373
Query: 324 STRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHH 383
++A A S I + Q +Q ++ + I+P A A +
Sbjct: 374 --QFAAAHSNIGSVLKEQGKLDQ---------ALAHYQQAITIDPNFADA--------YS 414
Query: 384 EVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLAN 443
+ F+ +L ++EE A +C A++ P+ ++NLA+
Sbjct: 415 NMGNVFK----DLCRLEE------------------AIQCYSTAIRLKPQFPDAYSNLAS 452
Query: 444 AYYLTGDHRSSGKCLEKVL 462
AY G + C K L
Sbjct: 453 AYKDGGRLDDAITCYRKAL 471
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 131/338 (38%), Gaps = 44/338 (13%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI----------LLRCEADIARPELL 118
R P A A+ LG + G+ +A+ +Y+ A +I L C D + EL
Sbjct: 234 RLAPDFADAYSNLGNALKEAGRVEEAIQAYKSALQIRPNFAIAHGNLASCYYDAGQMEL- 292
Query: 119 SLVQIHHAQCLLPE-SSGDNSLDKEL-EPEELEEILSKLKESMQSDTRQAVVWNTLGLIL 176
++ HA L P N+L L E +LE+ ++ + ++Q +N LG L
Sbjct: 293 AIHTFRHAIQLEPNFPDAYNNLGNALRECGQLEQAVTCYRTALQLKPDHPHAYNNLGNAL 352
Query: 177 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 236
G ++ ++ ++ + P N+G + G ++Q+ +Q I D N
Sbjct: 353 KDKGLVKEALHCYTTAARLLPQFAAAHSNIGSVLKEQGKLDQALAHYQQAITIDPNF--- 409
Query: 237 LINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 296
A A + G + A +C A++ P+ ++NLA
Sbjct: 410 ------------------ADAYSNMGNVFKDLCRLEEAIQCYSTAIRLKPQFPDAYSNLA 451
Query: 297 NAYYLTGDHRSSGKCLEKAAKLEPNCMS--TRYAVAVSRIKDAERSQEPTEQLSWAGNEM 354
+AY G + C KA L P+ Y ++ I D + + TE L +E
Sbjct: 452 SAYKDGGRLDDAITCYRKALALRPHFPDAFANYFHSMVFICDWQSRKHDTETLQRFVDEQ 511
Query: 355 ASILREGDPVQIEP------PIAWAGFAAVQKTHHEVA 386
S+ +G ++P P++ F + + + E A
Sbjct: 512 LSM--DGVLPSVQPFHALVYPLSMQRFQDISRRYAERA 547
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 84/201 (41%), Gaps = 33/201 (16%)
Query: 54 EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIA 113
E+ V+ +T L + P + HA Y LG LK ++A L C A
Sbjct: 325 EQAVTCYRTAL----QLKPDHPHA-------YNNLGNALKDKGLVKEA----LHCYTTAA 369
Query: 114 RPELLSLVQIHHAQCLLPESSGDNSLDKELEPEE--LEEILSKLKESMQSDTRQAVVWNT 171
R LLP+ + +S + E+ L++ L+ ++++ D A ++
Sbjct: 370 R--------------LLPQFAAAHSNIGSVLKEQGKLDQALAHYQQAITIDPNFADAYSN 415
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
+G + RL+ +I S+ + + P D NL AY G ++ + C++ +
Sbjct: 416 MGNVFKDLCRLEEAIQCYSTAIRLKPQFPDAYSNLASAYKDGGRLDDAITCYRKALALRP 475
Query: 232 NHPAALINY--AALLLCKYGS 250
+ P A NY + + +C + S
Sbjct: 476 HFPDAFANYFHSMVFICDWQS 496
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 115/323 (35%), Gaps = 51/323 (15%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E L ++ +SD + LG + + G L SI + V PN + GNLG
Sbjct: 53 QEALRLCEQLYESDAYRTDNLLLLGALHFQLGNLSESIFYNQQCIRVAPNFAEAYGNLGN 112
Query: 209 AYFQSGDMEQSAKCFQDLI------------------LKDQNHPAALINYAALLLCKYGS 250
A + GD+ + + + I L QN+ A A++L
Sbjct: 113 ALKELGDLAGAVQFYVRAIKLNPRFGDAYNNLANCYMLLGQNNEAVETYKMAIML---DP 169
Query: 251 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGK 310
L A +N G V AK C A++A P A W+NLA G ++
Sbjct: 170 QLVDAHSNLGN--LYKVQGRVEDAKLCYEQAIRAKPSFAIAWSNLAGLLKEDGQLEAAID 227
Query: 311 CLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPI 370
+A +L P+ + Y+ + +K+A R +E + A +QI P
Sbjct: 228 HYREAIRLAPD-FADAYSNLGNALKEAGRVEEAIQAYKSA-------------LQIRPNF 273
Query: 371 A---------WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAK 421
A + ++ H A + E N A L + + A
Sbjct: 274 AIAHGNLASCYYDAGQMELAIHTFRHAIQLEPNFPDAYNNLGNA-----LRECGQLEQAV 328
Query: 422 ECLLAALKADPKAAHIWANLANA 444
C AL+ P H + NL NA
Sbjct: 329 TCYRTALQLKPDHPHAYNNLGNA 351
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 107/278 (38%), Gaps = 47/278 (16%)
Query: 180 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 239
G Q ++ + L D D + LG +FQ G++ +S I +Q N
Sbjct: 50 GYYQEALRLCEQLYESDAYRTDNLLLLGALHFQLGNLSES-------IFYNQQCIRVAPN 102
Query: 240 YAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 299
+A YG++ G L + + A + + A+K +P+ + NLAN Y
Sbjct: 103 FAE----AYGNL----------GNALKELGDLAGAVQFYVRAIKLNPRFGDAYNNLANCY 148
Query: 300 YLTGDHRSSGKCLEKAAKLEPNCMSTR------YAVAVSRIKDAERSQEPTEQLSWAGNE 353
L G + + + + A L+P + Y V R++DA+ EQ A
Sbjct: 149 MLLGQNNEAVETYKMAIMLDPQLVDAHSNLGNLYKVQ-GRVEDAKLC---YEQAIRAKPS 204
Query: 354 MASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESA--FL 411
A IAW+ A + K ++ AA + + + A A + L
Sbjct: 205 FA--------------IAWSNLAGLLKEDGQLEAAIDHYREAIRLAPDFADAYSNLGNAL 250
Query: 412 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTG 449
+A V A + +AL+ P A NLA+ YY G
Sbjct: 251 KEAGRVEEAIQAYKSALQIRPNFAIAHGNLASCYYDAG 288
>gi|301094298|ref|XP_002896255.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase,
putative [Phytophthora infestans T30-4]
gi|262109650|gb|EEY67702.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase,
putative [Phytophthora infestans T30-4]
Length = 977
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 152/409 (37%), Gaps = 92/409 (22%)
Query: 54 EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIA 113
EE V + K ++ P+ AH LG +Y+ G+ + A Y A+ I ++ IA
Sbjct: 155 EEAVETYKMAIM----LDPRLVDAHSNLGNLYKVQGRLVDAKHCY--AQAIRVKPSFAIA 208
Query: 114 RPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLG 173
L L++ D LD +E +E+++ A ++ LG
Sbjct: 209 WSNLAGLLK------------DDGQLDAAVE---------HYREAIRLAPDFADAYSNLG 247
Query: 174 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNH 233
L +SGR+ +I S L + PN GNL Y+ +G ME + F+ I + N
Sbjct: 248 NALKESGRVDEAIQAYKSALQIRPNFAIAHGNLASCYYDAGQMELAIHTFRHAIQLEPNF 307
Query: 234 PAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWA 293
P A N G L + + A C AL+ P H +
Sbjct: 308 PDAYNNL---------------------GNALRECGHLEQAVTCYRTALQLKPDHPHAYN 346
Query: 294 NLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNE 353
NL NA G + + C AA+L P ++A A S I + Q +Q
Sbjct: 347 NLGNALKDKGLVKEALHCYTTAARLLP-----QFAAAHSNIGSVLKEQGKLDQ------- 394
Query: 354 MASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQ 413
++ + I+P A A + + F+ +L ++EE
Sbjct: 395 --ALAHYQQAITIDPNFADA--------YSNMGNVFK----DLCRLEE------------ 428
Query: 414 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVL 462
A +C A++ P+ ++NLA+AY G + C K L
Sbjct: 429 ------AIQCYSTAIRLKPQFPDAYSNLASAYKDGGRLDDAITCYRKAL 471
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 134/350 (38%), Gaps = 41/350 (11%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI----------LLRCEADIARPELL 118
R P A A+ LG + G+ +A+ +Y+ A +I L C D + EL
Sbjct: 234 RLAPDFADAYSNLGNALKESGRVDEAIQAYKSALQIRPNFAIAHGNLASCYYDAGQMEL- 292
Query: 119 SLVQIHHAQCLLPE-SSGDNSLDKEL-EPEELEEILSKLKESMQSDTRQAVVWNTLGLIL 176
++ HA L P N+L L E LE+ ++ + ++Q +N LG L
Sbjct: 293 AIHTFRHAIQLEPNFPDAYNNLGNALRECGHLEQAVTCYRTALQLKPDHPHAYNNLGNAL 352
Query: 177 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 236
G ++ ++ ++ + P N+G + G ++Q+ +Q I D N
Sbjct: 353 KDKGLVKEALHCYTTAARLLPQFAAAHSNIGSVLKEQGKLDQALAHYQQAITIDPNF--- 409
Query: 237 LINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 296
A A + G + A +C A++ P+ ++NLA
Sbjct: 410 ------------------ADAYSNMGNVFKDLCRLEEAIQCYSTAIRLKPQFPDAYSNLA 451
Query: 297 NAYYLTGDHRSSGKCLEKAAKLEPNCMS--TRYAVAVSRIKDAERSQEPTEQLSWAGNE- 353
+AY G + C KA L P Y ++ I D + ++ TE L +E
Sbjct: 452 SAYKDGGRLDDAITCYRKALALRPQFPDAFANYFHSMVFICDWQSRKQDTETLQRFVDEQ 511
Query: 354 --MASILREGDPVQ-IEPPIAWAGFAAVQKTHHEVAAAFETEENELSKME 400
+A +L P + P++ F + + + E A + ELS M
Sbjct: 512 LSVADVLPSVQPFHALVYPLSMQRFQDISRRYAE-RAKMNVQLVELSPMR 560
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 83/201 (41%), Gaps = 33/201 (16%)
Query: 54 EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIA 113
E+ V+ +T L + P + HA Y LG LK ++A L C A
Sbjct: 325 EQAVTCYRTAL----QLKPDHPHA-------YNNLGNALKDKGLVKEA----LHCYTTAA 369
Query: 114 RPELLSLVQIHHAQCLLPESSGDNSLDKELEPEE--LEEILSKLKESMQSDTRQAVVWNT 171
R LLP+ + +S + E+ L++ L+ ++++ D A ++
Sbjct: 370 R--------------LLPQFAAAHSNIGSVLKEQGKLDQALAHYQQAITIDPNFADAYSN 415
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
+G + RL+ +I S+ + + P D NL AY G ++ + C++ +
Sbjct: 416 MGNVFKDLCRLEEAIQCYSTAIRLKPQFPDAYSNLASAYKDGGRLDDAITCYRKALALRP 475
Query: 232 NHPAALINY--AALLLCKYGS 250
P A NY + + +C + S
Sbjct: 476 QFPDAFANYFHSMVFICDWQS 496
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 110/273 (40%), Gaps = 35/273 (12%)
Query: 179 SGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALI 238
+G Q ++ + L D D + LG +FQ G++ +S I +Q I
Sbjct: 49 AGYYQEALRLCEQLYESDAYRTDNLLLLGALHFQLGNLSES-------IFYNQQ----CI 97
Query: 239 NYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANA 298
A YG++ G L + V A + + A+K +P+ + NLAN
Sbjct: 98 RVAPDFAEAYGNL----------GNALKELGDVAGAVQFYVRAIKLNPRFGDAYNNLANC 147
Query: 299 YYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASIL 358
Y L G + + + A L+P R A S + + + Q +L A + A +
Sbjct: 148 YMLLGQTEEAVETYKMAIMLDP-----RLVDAHSNLGNLYKVQ---GRLVDAKHCYAQAI 199
Query: 359 REGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESA--FLDQASA 416
R V+ IAW+ A + K ++ AA E + + A A + L ++
Sbjct: 200 R----VKPSFAIAWSNLAGLLKDDGQLDAAVEHYREAIRLAPDFADAYSNLGNALKESGR 255
Query: 417 VNVAKECLLAALKADPKAAHIWANLANAYYLTG 449
V+ A + +AL+ P A NLA+ YY G
Sbjct: 256 VDEAIQAYKSALQIRPNFAIAHGNLASCYYDAG 288
>gi|381160076|ref|ZP_09869308.1| tetratricopeptide repeat protein [Thiorhodovibrio sp. 970]
gi|380878140|gb|EIC20232.1| tetratricopeptide repeat protein [Thiorhodovibrio sp. 970]
Length = 250
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 21/182 (11%)
Query: 140 DKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNN 199
D+ E +++E + +E + D + + N LG++ + G + +++ + LA +P+
Sbjct: 50 DRLHEAGQIDEAETLYREVLNQDPYEPITLNQLGVLKINDGDPEGALTFIRRALASEPDA 109
Query: 200 CDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANT 259
+ NLG+A Q +E++A F + D ++ AA N A+L+ +
Sbjct: 110 SEYHYNLGVALTQLERIEEAASAFDRSLELDPSNAAACNNLGAMLMMQ------------ 157
Query: 260 GEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLE 319
+Q A A L A+K DP+ A + NL TG H+ + LE A +L
Sbjct: 158 ------EQTEAATAA---FLTAIKLDPQYAGAYNNLGRLLAQTGKHQDAETILEHAIRLS 208
Query: 320 PN 321
P
Sbjct: 209 PT 210
>gi|94267075|ref|ZP_01290714.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
gi|93452212|gb|EAT02868.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
Length = 212
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
ELE+I+++L++ + + L L+ K+GR+ +I+ L L +D + + + NL
Sbjct: 10 ELEKIIAELEQKCAELPDNVIAHHHLALVYRKAGRIDEAIARLEKCLQLDEHAKEPLINL 69
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G YF+ GD+E++ + + + K LA A N G L
Sbjct: 70 GAIYFEQGDLERALEANRRAV-------------------KVMPELAQAHTNI--GLILQ 108
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
Q A AL+ DPK + W N+A G+ + K +A KLEP
Sbjct: 109 QQGKFAEAVAAYEQALQHDPKQVNAWVNMATTQIADGNFELAAKAAREAIKLEPQFGMAH 168
Query: 327 YAVAVS 332
+AV+
Sbjct: 169 NNLAVA 174
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 23/158 (14%)
Query: 70 KMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCL 129
++P N AH L L+Y++ G+ +A++ EK L+ + P L++L I+ Q
Sbjct: 24 ELPDNVIAHHHLALVYRKAGRIDEAIARLEKC----LQLDEHAKEP-LINLGAIYFEQ-- 76
Query: 130 LPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVL 189
GD LE L + +++ A +GLIL + G+ +++
Sbjct: 77 -----GD-----------LERALEANRRAVKVMPELAQAHTNIGLILQQQGKFAEAVAAY 120
Query: 190 SSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
L DP + N+ G+ E +AK ++ I
Sbjct: 121 EQALQHDPKQVNAWVNMATTQIADGNFELAAKAAREAI 158
>gi|425453499|ref|ZP_18833256.1| TPR repeat protein (modular protein) [Microcystis aeruginosa PCC
9807]
gi|389802856|emb|CCI18142.1| TPR repeat protein (modular protein) [Microcystis aeruginosa PCC
9807]
Length = 1039
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 107/262 (40%), Gaps = 40/262 (15%)
Query: 138 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 197
SL K+L+ LE+ ++ ++ + + A W+ LG+I+ G++ +I L ++P
Sbjct: 383 SLQKQLK---LEDAIALYQQLINQSPQYAAAWHQLGVIMDSLGQIDQAILAYKQALLINP 439
Query: 198 NNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGA 257
N + NLGI GD++++ CF I +QN+ A A
Sbjct: 440 NYAESHNNLGIIAVSKGDLDEAIICFNQAIRSNQNY---------------------AFA 478
Query: 258 NTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAK 317
+ G L + A A++ +P NL N L G + + A K
Sbjct: 479 DNNLGLVLQMQDKLGDAGVKFQEAIRKNPNYPEAHFNLGNVLQLQGKTEEAIAYFQTAIK 538
Query: 318 LEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAA 377
L P +Y A + + A QE E E S+ ++ +Q P A+A +
Sbjct: 539 LNP-----KYIKAYNSLALALGRQEKIE-------EAMSVFKQALAIQPNSPEAFACLFS 586
Query: 378 VQKTHHEVAAAFETEENELSKM 399
++ E+ +ET E +L ++
Sbjct: 587 MK----EMTCNWETREADLIQL 604
>gi|406661890|ref|ZP_11070000.1| TPR repeat-containing protein yrrB [Cecembia lonarensis LW9]
gi|405554248|gb|EKB49358.1| TPR repeat-containing protein yrrB [Cecembia lonarensis LW9]
Length = 471
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 112/290 (38%), Gaps = 49/290 (16%)
Query: 75 AHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESS 134
A H+LLG +++ + +A+ Y++ +I + E +L Q+ ++ E
Sbjct: 135 AEVHYLLGNLFRSENKTDQAIYHYKECVKIRINHED--------ALFQL----AMITEED 182
Query: 135 GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLA 194
G EIL +E + D A W LG++ + GR + +I L
Sbjct: 183 GS-----------FNEILQFYQEFIDQDPYSAGAWYNLGVVYNRLGRYEDAIKAYDYALI 231
Query: 195 VDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-------------------LKDQNHPA 235
+D + NLG AY + +Q+ + +Q+ I L +
Sbjct: 232 IDESFASAYFNLGNAYMNTQQYDQALEAYQNTINCEGANAENCCYLGAAYEKLDQIDMAF 291
Query: 236 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 295
+A L +Y G G C+ + S A A+K + + W L
Sbjct: 292 KYFKKSAKLDPEYDDAWFGL------GMCMLKKSKYFEAIHYFKKAIKLTEENPNYWVGL 345
Query: 296 ANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTE 345
A+A Y G+ ++S + E+A LEP + T +++ D R +E +
Sbjct: 346 ADAEYQLGNLQASAEAYEEAINLEPGIVETYINLSIIYF-DQNRFEETID 394
>gi|220922903|ref|YP_002498205.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
gi|219947510|gb|ACL57902.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
Length = 784
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 141/384 (36%), Gaps = 62/384 (16%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
PK+A A+ GL + R G+ +A++ Y++A LR + A I+ + L
Sbjct: 57 PKSAVAYTHRGLAFYRKGEYDRAIADYDQA----LRLDPKYA--------NIYINRGLAF 104
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
G E + ++ ++++ D R AVV+ G G +I+
Sbjct: 105 YRKG-----------EYDRAIADYDQALRLDLRDAVVYTNRGDAFRSKGEYDRAIADYDQ 153
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 251
L +P AY GD QS K D + D +H AL L
Sbjct: 154 ALRFNPK-------YAYAYRNRGDAFQS-KGEYDRAIADYDH--------ALRLNP---- 193
Query: 252 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 311
A A T G S + A AL+ DPK A+I+ N A+ G++ +
Sbjct: 194 -EDAAAYTHRGLAFQSKSEYDRAIADYDQALRFDPKYANIYINRGYAFRSKGEYNRAIAD 252
Query: 312 LEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIA 371
++A +L+P + +A + DA RS+ G +I ++ P A
Sbjct: 253 FDQALRLDPKSV-----IAYTGRGDAFRSK---------GENDRAIADYDQALRFNPKYA 298
Query: 372 WA----GFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAA 427
+A G A K ++ A A L A + A A
Sbjct: 299 YAYRNRGDAFRNKGEYDRAIADYDHALRLDPKSATAYNNRGLAFQNKGEYDRAIADYDQA 358
Query: 428 LKADPKAAHIWANLANAYYLTGDH 451
L+ DPK A + N A+Y G+H
Sbjct: 359 LRLDPKDAAAYTNRGAAFYRKGEH 382
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 107/287 (37%), Gaps = 40/287 (13%)
Query: 66 HVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI-------------LLRCEADI 112
H R P++A A+ GL +Q + +A++ Y++A R + +
Sbjct: 187 HALRLNPEDAAAYTHRGLAFQSKSEYDRAIADYDQALRFDPKYANIYINRGYAFRSKGEY 246
Query: 113 ARPELLSLVQIHHAQCLLPES------SGDNSLDKELEPEELEEILSKLKESMQSDTRQA 166
R ++ A L P+S GD K E + ++ ++++ + + A
Sbjct: 247 NR----AIADFDQALRLDPKSVIAYTGRGDAFRSKG----ENDRAIADYDQALRFNPKYA 298
Query: 167 VVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDL 226
+ G G +I+ L +DP + N G+A+ G+ +++ +
Sbjct: 299 YAYRNRGDAFRNKGEYDRAIADYDHALRLDPKSATAYNNRGLAFQNKGEYDRAIADYDQA 358
Query: 227 ILKDQNHPAALINYAALLLCK---------YGSVL----AGAGANTGEGACLDQASAVNV 273
+ D AA N A K Y L A A G GA L++ +
Sbjct: 359 LRLDPKDAAAYTNRGAAFYRKGEHDRAIADYDEALRLDPKSAAAYNGRGAALNKKGEYDR 418
Query: 274 AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
A L AL+ P A+ + + A+ GD + L +A +L P
Sbjct: 419 AIADLDQALRLKPGFANPYCHRGTAFRHKGDLDRALAELNEAVRLNP 465
>gi|386813211|ref|ZP_10100435.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386814261|ref|ZP_10101485.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386402708|dbj|GAB63316.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403758|dbj|GAB64366.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 254
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 87/200 (43%), Gaps = 26/200 (13%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
+EE +++ K++++ D +N LG++ +GRL ++ L + + P + NLG
Sbjct: 64 MEEAINEYKKTLEIDPNFVKAYNNLGVVYHNAGRLDEAVGSLKKAVELSPQYVEAYYNLG 123
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 267
IAY++ +A F+ + + +PA Y L G
Sbjct: 124 IAYYKKKQYNDAAGAFEKAV---EFNPAFDKGYYNL------------------GIVYSS 162
Query: 268 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 327
++ A + A + +PK ++ + NL Y + + + L+KA +L PN + +
Sbjct: 163 MDNLDEAIDAFKKATEINPKYSNAYYNLGVTYAKKDHYDDAIQSLQKALELNPNNYNAHF 222
Query: 328 AVAV-----SRIKDAERSQE 342
A+ V + K+A S++
Sbjct: 223 ALGVIHQTKRKTKEANESRD 242
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 33/175 (18%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL----SLVQIHHAQ 127
P +A AH+ LG++Y G +A++ Y+K EI P + +L ++H
Sbjct: 45 PNSAEAHYNLGIVYHEKGMMEEAINEYKKTLEI---------DPNFVKAYNNLGVVYHNA 95
Query: 128 CLLPESSGDNSLDK--ELEPEELEEI----LSKLKESMQSDT----RQAVVWN------- 170
L E+ G SL K EL P+ +E ++ K+ +D +AV +N
Sbjct: 96 GRLDEAVG--SLKKAVELSPQYVEAYYNLGIAYYKKKQYNDAAGAFEKAVEFNPAFDKGY 153
Query: 171 -TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 224
LG++ L +I ++P + NLG+ Y + + + + Q
Sbjct: 154 YNLGIVYSSMDNLDEAIDAFKKATEINPKYSNAYYNLGVTYAKKDHYDDAIQSLQ 208
>gi|302391517|ref|YP_003827337.1| hypothetical protein [Acetohalobium arabaticum DSM 5501]
gi|302203594|gb|ADL12272.1| Tetratricopeptide TPR_2 repeat protein [Acetohalobium arabaticum
DSM 5501]
Length = 251
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 44 SGLGTSSSSREEKVSSLKTGLVHV-----ARKMPKNA----------HAHFLLGLMYQRL 88
+G ++SS ++VS+ K GL H +PK A + H++LGL Y RL
Sbjct: 21 TGFVATASSSNKEVSNYKLGLKHFRAGDYQSAVPKLAAAISENPDLMYPHYILGLTYYRL 80
Query: 89 GQPLKAVSSYEKAEEIL---LRCEADIARPELLSLVQIHHA-----QCLLPESSGDNSLD 140
+ A + +KA EI R ++ R L +I A Q + D++ +
Sbjct: 81 DKYKFAETQLKKAHEIKPEHYRVMVNLGRV-YLKQDKIDQAIEITKQAIETNQKIDDAYN 139
Query: 141 ----KELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVD 196
+ E+++E + K++++ + V N LG +++ + + +ISVL +A++
Sbjct: 140 VLGRAYRKAEKIKEAIDSFKKAVELNDENYYVLNNLGYTYIQTNQYKEAISVLKQAVALN 199
Query: 197 PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 239
P NLG AY +++++ K +++ + D + A +N
Sbjct: 200 PGIPYLYNNLGFAYENVDELKKAKKAYEEALAVDSTYQKAEVN 242
>gi|383319597|ref|YP_005380438.1| Tetratricopeptide repeat-containing protein [Methanocella conradii
HZ254]
gi|379320967|gb|AFC99919.1| Tetratricopeptide repeat-containing protein [Methanocella conradii
HZ254]
Length = 245
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 82/198 (41%), Gaps = 23/198 (11%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
L ++++++ D +A W GL+ + G L ++ L L +DP + + G Y+
Sbjct: 56 LESIEKALELDPLRADAWFLKGLLFYQRGNLIKALGYLEQALDIDPRHAEAWCISGNCYY 115
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 271
GD +++ C++ I ++ +P A N +G L
Sbjct: 116 YIGDFQKAMDCYEATINIEREYPKAWYN---------------------KGVVLSDIRLY 154
Query: 272 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS--TRYAV 329
N A +C AL+ +P A +W N + + + CL++A + P ++ A
Sbjct: 155 NEALQCYDEALRINPGVAVVWTNKGYCMAMLNKYEEALDCLDRALDINPEDVTALNNKAA 214
Query: 330 AVSRIKDAERSQEPTEQL 347
+ R+ E + E E++
Sbjct: 215 TLRRLGRDEEAAEYDEKV 232
>gi|303326069|ref|ZP_07356512.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3]
gi|302863985|gb|EFL86916.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3]
Length = 252
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%)
Query: 145 PEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIG 204
P EL + +++L++++ +D + A W LG + +G+ + +IS L P N D +
Sbjct: 113 PPELAQKIAELEKTLLADPKDAARWAALGNLYFDTGQAKQAISAYERSLTFAPGNPDVLT 172
Query: 205 NLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
+LGI Y ++G EQ+ F+ H AL N +L
Sbjct: 173 DLGIMYREAGAYEQAVDSFRKASAARPGHENALFNEGVVL 212
>gi|428223794|ref|YP_007107891.1| glycosyl transferase family protein [Geitlerinema sp. PCC 7407]
gi|427983695|gb|AFY64839.1| glycosyl transferase family 9 [Geitlerinema sp. PCC 7407]
Length = 2232
Score = 58.5 bits (140), Expect = 6e-06, Method: Composition-based stats.
Identities = 76/305 (24%), Positives = 118/305 (38%), Gaps = 45/305 (14%)
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS-AKCFQDLILKD 230
LG++ ++GR Q +I++ LA+ PN + NLG+A ++GD+E + A C + + LK
Sbjct: 57 LGVLAYQTGRGQEAIALYRQALALKPNYAEVHSNLGVALKEAGDLEGAIAHCQRAVALKP 116
Query: 231 Q----------------NHPAALINY--AALLLCKYGSVLAGAGANTGEGACLDQASAVN 272
P A+ Y A L + L G N L Q +
Sbjct: 117 DYAGSYNNLGNALQAQGRIPEAIAAYRRAVELQPGFWEALGNLGNN------LRQQGQWS 170
Query: 273 VAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 332
A C AL+A P A W NL A+ G+ S +C E+A L P + ++
Sbjct: 171 EAMACYQQALQAQPTALDPWLNLGAAWREGGNWAESIRCYERAIALHPQAAEAHSGLGIT 230
Query: 333 RIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWA----GFA-AVQKTHHEVAA 387
+ AG +I + ++P A A G A +Q E A
Sbjct: 231 YKE--------------AGQLEGAIACYERAIALQPSFAEAHNNLGNAFQIQGRLQEAIA 276
Query: 388 AFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYL 447
++ + + A + L +A V A AL DP++ NL+ A L
Sbjct: 277 CYQQALTHQPRYVQ-AHSNLGVVLQEAGQVAAAIAQYRQALALDPESVDTHNNLSLALLL 335
Query: 448 TGDHR 452
TG R
Sbjct: 336 TGQLR 340
Score = 54.3 bits (129), Expect = 1e-04, Method: Composition-based stats.
Identities = 64/286 (22%), Positives = 116/286 (40%), Gaps = 49/286 (17%)
Query: 66 HVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHH 125
+ + P+N A LLG++ + G+ +A++ Y +A + +P + ++H
Sbjct: 42 QILAQQPQNLDALQLLGVLAYQTGRGQEAIALYRQALAL---------KP---NYAEVHS 89
Query: 126 AQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSS 185
+ + +GD LE ++ + ++ A +N LG L GR+ +
Sbjct: 90 NLGVALKEAGD-----------LEGAIAHCQRAVALKPDYAGSYNNLGNALQAQGRIPEA 138
Query: 186 ISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALI------- 238
I+ + + P + +GNLG Q G ++ C+Q + Q P AL
Sbjct: 139 IAAYRRAVELQPGFWEALGNLGNNLRQQGQWSEAMACYQQAL---QAQPTALDPWLNLGA 195
Query: 239 ------NYAALLLCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
N+A + C Y +A A A++G G +A + A C A+ P
Sbjct: 196 AWREGGNWAESIRC-YERAIALHPQAAEAHSGLGITYKEAGQLEGAIACYERAIALQPSF 254
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRI 334
A NL NA+ + G + + C ++A +P RY A S +
Sbjct: 255 AEAHNNLGNAFQIQGRLQEAIACYQQALTHQP-----RYVQAHSNL 295
Score = 45.8 bits (107), Expect = 0.042, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 23/147 (15%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P+ A AH LG+ Y+ GQ A++ YE+A I L+ A L + QI
Sbjct: 218 PQAAEAHSGLGITYKEAGQLEGAIACYERA--IALQPSFAEAHNNLGNAFQIQG------ 269
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
L+E ++ ++++ R + LG++L ++G++ ++I+
Sbjct: 270 ---------------RLQEAIACYQQALTHQPRYVQAHSNLGVVLQEAGQVAAAIAQYRQ 314
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQ 218
LA+DP + D NL +A +G + +
Sbjct: 315 ALALDPESVDTHNNLSLALLLTGQLRE 341
>gi|345892965|ref|ZP_08843774.1| hypothetical protein HMPREF1022_02434 [Desulfovibrio sp.
6_1_46AFAA]
gi|345046770|gb|EGW50650.1| hypothetical protein HMPREF1022_02434 [Desulfovibrio sp.
6_1_46AFAA]
Length = 252
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%)
Query: 145 PEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIG 204
P EL + +++L++++ +D + A W LG + +G+ + +IS L P N D +
Sbjct: 113 PPELAQKIAELEKTLLADPKDAARWAALGNLYFDTGQAKQAISAYERSLTFAPGNPDVLT 172
Query: 205 NLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
+LGI Y ++G EQ+ F+ H AL N +L
Sbjct: 173 DLGIMYREAGAYEQAVDSFRKASAARPGHENALFNEGVVL 212
>gi|327401541|ref|YP_004342380.1| hypothetical protein Arcve_1665 [Archaeoglobus veneficus SNP6]
gi|327317049|gb|AEA47665.1| Tetratricopeptide TPR_1 repeat-containing protein [Archaeoglobus
veneficus SNP6]
Length = 222
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 88/192 (45%), Gaps = 23/192 (11%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
++E +S + +++ + A W G++L +G+ +I+ +A++P++ N+G
Sbjct: 52 IDEAISYIDRALELNPDYADAWYNRGIVLSDAGKYDEAIACFEKAIALNPDDAAAWNNMG 111
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 267
+AY++SG+M ++ +C++ + D+ H AA N G +
Sbjct: 112 LAYYESGNMGKAIECYRKCVSIDEEHAAAWYNM---------------------GLAYYE 150
Query: 268 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP-NCMSTR 326
+ N A+E AL+ D ++ NL Y + + +C + +++P N +T
Sbjct: 151 SGRFNKAEESFKKALELD-ESVDTLNNLGIVYGKLRQYEMAMECFNRILEIDPENSAATY 209
Query: 327 YAVAVSRIKDAE 338
+ + R+ + E
Sbjct: 210 NLLILKRLMEKE 221
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 76/175 (43%), Gaps = 24/175 (13%)
Query: 145 PEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIG 204
PEE E SK ++ + V N LG+ L + GR+ +IS + L ++P+ D
Sbjct: 18 PEEEVEFFSK---CLEMEPENIYVLNNLGIALYELGRIDEAISYIDRALELNPDYADAWY 74
Query: 205 NLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGAC 264
N GI +G +++ CF+ I + + AA N + L Y S N G+
Sbjct: 75 NRGIVLSDAGKYDEAIACFEKAIALNPDDAAAWNN---MGLAYYES------GNMGK--- 122
Query: 265 LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLE 319
A EC + D + A W N+ AYY +G + + +KA +L+
Sbjct: 123 ---------AIECYRKCVSIDEEHAAAWYNMGLAYYESGRFNKAEESFKKALELD 168
>gi|110636430|ref|YP_676637.1| TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406]
gi|110279111|gb|ABG57297.1| TPR repeat containing protein [Cytophaga hutchinsonii ATCC 33406]
Length = 466
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 109/260 (41%), Gaps = 44/260 (16%)
Query: 78 HFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDN 137
H+ +G++YQ +G ++++ ++A I+L + + A EL +++
Sbjct: 137 HYHMGVIYQDMGNFEESINHLKEA--IMLNSQHEDAIYELSYSLEV-------------- 180
Query: 138 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 197
LD+ LEE + K+ ++ D W LG+ K G+L ++ ++A++
Sbjct: 181 -LDR------LEESIDFFKQLIEKDPYSHFAWFCLGVSYFKQGKLDEALDAYEFVIAIND 233
Query: 198 NNCDCIGNLGIAY-------------FQSGDME-QSAKCFQDLILKDQN---HPAALINY 240
N+G Y FQ+ DME ++A F ++ ++ HP A+ Y
Sbjct: 234 KYSSAYYNIGECYVYKNEYEKALEYFFQTMDMEDKTADVFYNIGFCYEHLGMHPKAIEFY 293
Query: 241 AALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 300
K + A G G CL+ + ALK D A W ANA Y
Sbjct: 294 RK--ASKADAYF--HEAYYGIGKCLEAQDKSYESIHFFKRALKLDEANAEYWLAKANAEY 349
Query: 301 LTGDHRSSGKCLEKAAKLEP 320
TG+ SS + E+A LEP
Sbjct: 350 KTGNIISSLEAFEEACVLEP 369
>gi|218246150|ref|YP_002371521.1| hypothetical protein PCC8801_1300 [Cyanothece sp. PCC 8801]
gi|218166628|gb|ACK65365.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
Length = 878
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 17/191 (8%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+L+E ++ ++++Q + A +N LG L G+L+ +I+ + ++PN D NL
Sbjct: 78 KLDEAIAAYQKAIQLNPNDADAYNNLGNALSDQGKLEEAIAAYQKAIQLNPNYADAYYNL 137
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL---------LCKYGSVL----- 252
GIA G +E++ +Q I + N A N L + Y +
Sbjct: 138 GIALSDQGKLEEAIAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPN 197
Query: 253 -AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 311
A A N G A DQ ++ A A++ DP A+ + NL A Y G +
Sbjct: 198 YADAYYNLGN-ALFDQGK-LDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAA 255
Query: 312 LEKAAKLEPNC 322
+KA +L PN
Sbjct: 256 YQKAIQLNPNL 266
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 82/193 (42%), Gaps = 26/193 (13%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E ++ ++++Q D A +N LGL L G+ +I+ + ++PN NLG
Sbjct: 420 DEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDEAITAYQKAIQLNPNFALAYNNLGN 479
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
A + G E++ +Q I + N AL G+ L+ G D+A
Sbjct: 480 ALYSQGKREEAIAAYQKAIQLNPNF--------ALAYNNLGNALSDQGKR-------DEA 524
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 328
A A++ +P A + NL NA G + +KA +L PN +A
Sbjct: 525 IA------AYQKAIQLNPNFALAYNNLGNALSDQGKLNEAIATYQKAIQLNPN-----FA 573
Query: 329 VAVSRIKDAERSQ 341
+A + + +A + Q
Sbjct: 574 LAYNNLGNALKDQ 586
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 123/322 (38%), Gaps = 39/322 (12%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+L+E ++ ++++Q D A +N LG L K G+L+ +I+ + ++PN + NL
Sbjct: 214 KLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLNPNLAEAYNNL 273
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G+A G +++ +Q I + N LA A N G L
Sbjct: 274 GVALSDQGKRDEAIAAYQKAIQLNPN-------------------LAEAYNNL--GVALS 312
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
+ A A++ +P A + NL A G + +KA +L PN
Sbjct: 313 DQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQKAIQLNPN----- 367
Query: 327 YAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWA----GFAAVQKTH 382
+A+A + + A LS G +I +Q+ P A A G A +
Sbjct: 368 FALAYNNLGVA---------LSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALRNQGK 418
Query: 383 HEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLA 442
+ A A + +L + A L + A A++ +P A + NL
Sbjct: 419 RDEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDEAITAYQKAIQLNPNFALAYNNLG 478
Query: 443 NAYYLTGDHRSSGKCLEKVLMV 464
NA Y G + +K + +
Sbjct: 479 NALYSQGKREEAIAAYQKAIQL 500
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 71/180 (39%), Gaps = 13/180 (7%)
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
+ ++ D A +N LG L G+L +I+ + ++PN+ D NLG A G
Sbjct: 52 FRRVIELDPNLADAYNNLGNALYYQGKLDEAIAAYQKAIQLNPNDADAYNNLGNALSDQG 111
Query: 215 DMEQSAKCFQDLILKDQNHPAALINYAALL---------LCKYGSVLA----GAGANTGE 261
+E++ +Q I + N+ A N L + Y + A
Sbjct: 112 KLEEAIAAYQKAIQLNPNYADAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNFTQAYYNL 171
Query: 262 GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
G L + A A++ +P A + NL NA + G + +KA +L+PN
Sbjct: 172 GIALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGNALFDQGKLDEAIAAYQKAIQLDPN 231
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 113/284 (39%), Gaps = 43/284 (15%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A A+ LG+ G+ +A+++Y+KA ++ P L
Sbjct: 264 PNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQL---------NPNL-------------- 300
Query: 132 ESSGDNSLDKELEPE-ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
+ N+L L + + +E ++ ++++Q + A+ +N LG+ L G+ +I+
Sbjct: 301 -AEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQ 359
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL------ 244
+ ++PN NLG+A G +++ +Q I + N A N L
Sbjct: 360 KAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALRNQGKR 419
Query: 245 ---LCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 297
+ Y + A A G L + A A++ +P A + NL N
Sbjct: 420 DEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDEAITAYQKAIQLNPNFALAYNNLGN 479
Query: 298 AYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ 341
A Y G + +KA +L PN +A+A + + +A Q
Sbjct: 480 ALYSQGKREEAIAAYQKAIQLNPN-----FALAYNNLGNALSDQ 518
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 122/297 (41%), Gaps = 52/297 (17%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P +A+A+ LGL + G+ +A+++Y+KA +Q++ L
Sbjct: 434 PNDANAYNNLGLALRNQGKRDEAITAYQKA-------------------IQLNPNFALAY 474
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+ G N+L + + EE ++ ++++Q + A+ +N LG L G+ +I+
Sbjct: 475 NNLG-NALYSQ---GKREEAIAAYQKAIQLNPNFALAYNNLGNALSDQGKRDEAIAAYQK 530
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 251
+ ++PN NLG A G + ++ +Q I + N AL G+
Sbjct: 531 AIQLNPNFALAYNNLGNALSDQGKLNEAIATYQKAIQLNPNF--------ALAYNNLGNA 582
Query: 252 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWA--NLANAYYLTGDHRSSG 309
L G L++A A L P AH A NL Y G +
Sbjct: 583 LKDQGK-------LNEAIAAYQKALSLPEDTSVTPTTAHTLAHNNLGLVYQPQGKLEEAL 635
Query: 310 KCLEKAAKLEPNCMSTRYAVAVSRIKDAERS--QEPTEQLSWAGNEMASILREGDPV 364
+ E A K++P YA+ + +DA + ++PTE L++ N + L DP
Sbjct: 636 REYEAALKIDPKF---EYAI---KNRDAVLALLKQPTE-LAYTTN---NYLPSDDPF 682
>gi|404449456|ref|ZP_11014446.1| hypothetical protein A33Q_08997 [Indibacter alkaliphilus LW1]
gi|403765144|gb|EJZ26029.1| hypothetical protein A33Q_08997 [Indibacter alkaliphilus LW1]
Length = 471
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 110/285 (38%), Gaps = 39/285 (13%)
Query: 75 AHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESS 134
A H+LLG +Y+ KA+ Y++ ++ + E +L Q+ ++ E
Sbjct: 135 AEVHYLLGNLYRAENDSEKAIFHYKQCVKLRINHED--------ALFQL----AMITEEE 182
Query: 135 GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLA 194
G +EIL +E + D A W +G++ + GR + +I L
Sbjct: 183 GS-----------FDEILIFYQEFIDQDPYSAGAWYNMGVVYNRLGRYEEAIQAYDYALI 231
Query: 195 VDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAG 254
+D + NLG AY + E + + +Q+ I + A Y A K G +
Sbjct: 232 IDDSFASAYFNLGNAYMNTEQFELALEAYQNTI-NCEGANAENCCYLAAAYEKMGQIDMA 290
Query: 255 A--------------GANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 300
A G G C+ + A A+K A W LA+A Y
Sbjct: 291 FKYFKKSAKLDPEYDDAWFGLGMCMLKKEKFFEAIHYFRKAIKLCNDNATYWVGLADAEY 350
Query: 301 LTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTE 345
G+ ++S + E+A LEP M T +A+ D R +E +
Sbjct: 351 NLGNLQASSEAYEEAINLEPGIMETYVNLAIIYF-DQNRFEETVD 394
>gi|134045937|ref|YP_001097423.1| hypothetical protein MmarC5_0901 [Methanococcus maripaludis C5]
gi|132663562|gb|ABO35208.1| TPR repeat-containing protein [Methanococcus maripaludis C5]
Length = 409
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/326 (19%), Positives = 113/326 (34%), Gaps = 45/326 (13%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
EE E+ L +S++ D W G+ L G SI
Sbjct: 106 EEYEKALYYFNKSLEIDNSIGKTWFYKGICLKMLGNYDESIESFDKSTGNYEEIVLIWNE 165
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
LG Y+Q+ + E++ +CF +L ++N + G+G C
Sbjct: 166 LGYIYYQNEEYEKALECFDKALLLNRNLKYSF---------------------NGKGLCY 204
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLE---PNC 322
++ +A EC AL D W N YY ++ S+ C +KA +L P+C
Sbjct: 205 EKKEQYLLAIECFDKALLQDSFYYGAWHNKGIEYYKLKNYSSAVLCFDKALELNNSSPHC 264
Query: 323 MSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEP--PIAWAGFAAVQK 380
+ + L G ++L Q++P P+ W+G
Sbjct: 265 YFYK-----------------ADSLKCLGEYEKAVLNYKKATQLDPENPVFWSGMGLSYS 307
Query: 381 THHEVAAAFETEEN--ELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIW 438
+ + E E EL+ ++ + N + AL+ + + + W
Sbjct: 308 YLKDYNRSIEAYEKAVELTPNDDVLWSNIGYLQYNNKNYNESISYFEKALELNSENKYAW 367
Query: 439 ANLANAYYLTGDHRSSGKCLEKVLMV 464
L N+Y L ++ + C + + +
Sbjct: 368 NGLGNSYLLIKNYEKAVLCYNRAIEI 393
>gi|427731479|ref|YP_007077716.1| hypothetical protein Nos7524_4360 [Nostoc sp. PCC 7524]
gi|427367398|gb|AFY50119.1| tetratricopeptide repeat protein [Nostoc sp. PCC 7524]
Length = 379
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 22/153 (14%)
Query: 163 TRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKC 222
TR A +N LGL+L + G+L +I+ DP+N + NL IA +SG ME++
Sbjct: 160 TRTAAHYN-LGLVLYEQGQLPEAIAAYQQATNFDPSNANAYYNLAIALQESGKMEEAIVA 218
Query: 223 FQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAAL 282
+Q ++ D + AA N GS++A G A A+ V + A+
Sbjct: 219 YQQVLKLDPKNAAAYSN--------LGSLMALQGQT---------AEAIAVYTQ----AV 257
Query: 283 KADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 315
+ DPK A + NL Y GD + + L++A
Sbjct: 258 RQDPKNASAYYNLGVTLYNQGDLKKATAALKRA 290
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 21/167 (12%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 128
R P A++ LGL QR GQ A+++Y +A L+ A L LV Q
Sbjct: 122 RINPNLGEAYYNLGLALQRQGQKEAAITAYRQA---LVIDPTRTAAHYNLGLVLYEQGQ- 177
Query: 129 LLPESSGDNSLDKELEPE----------------ELEEILSKLKESMQSDTRQAVVWNTL 172
LPE+ +P ++EE + ++ ++ D + A ++ L
Sbjct: 178 -LPEAIAAYQQATNFDPSNANAYYNLAIALQESGKMEEAIVAYQQVLKLDPKNAAAYSNL 236
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 219
G ++ G+ +I+V + + DP N NLG+ + GD++++
Sbjct: 237 GSLMALQGQTAEAIAVYTQAVRQDPKNASAYYNLGVTLYNQGDLKKA 283
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 17/193 (8%)
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
++++Q D + N LG I L RL ++ + ++PN + NLG+A + G
Sbjct: 83 FRQALQRDPNLGMARNYLGNIFLMQNRLDIAVQEYGEAIRINPNLGEAYYNLGLALQRQG 142
Query: 215 DMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASA---V 271
E + ++ ++ D AA N L+L + G L A A + D ++A
Sbjct: 143 QKEAAITAYRQALVIDPTRTAAHYN-LGLVLYEQGQ-LPEAIAAYQQATNFDPSNANAYY 200
Query: 272 NVA---------KECLLA---ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLE 319
N+A +E ++A LK DPK A ++NL + L G + +A + +
Sbjct: 201 NLAIALQESGKMEEAIVAYQQVLKLDPKNAAAYSNLGSLMALQGQTAEAIAVYTQAVRQD 260
Query: 320 PNCMSTRYAVAVS 332
P S Y + V+
Sbjct: 261 PKNASAYYNLGVT 273
>gi|374851919|dbj|BAL54865.1| tetratricopeptide repeat domain protein [uncultured Acidobacteria
bacterium]
Length = 1230
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 106/249 (42%), Gaps = 27/249 (10%)
Query: 12 GKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLKTGLVHVARKM 71
G + + G+ I++ + + G + G LG + + E +++ +A++
Sbjct: 82 GMALARRGELEEAIAAYERAIEQTGGNHPGAYHNLGLALFGKGEVERAIEAFRQAIAQRG 141
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
AHF LG G+ +A+++Y A E ++ P+ IH L
Sbjct: 142 GVFPRAHFHLGFALAHTGRIEEAIAAYRTAIE-----QSGGHSPD------IHFQLGWLL 190
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNT---LGLILLKSGRLQSSISV 188
GD LEE + + ++ + R V LG LL GRL+ +I+
Sbjct: 191 MGKGD-----------LEEAIEAFRTAI--EQRGGVYPEAQYELGRALLARGRLEEAITT 237
Query: 189 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 248
+LL V+PN+ + NLG AY + GD+E + + + I + + AA + LLL +
Sbjct: 238 FRTLLQVNPNHPEAYFNLGRAYLRQGDLEAAREALETAIRQRGGNFAAAHHQLGLLLAQQ 297
Query: 249 GSVLAGAGA 257
G V A A
Sbjct: 298 GDVEQAAAA 306
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 46 LGTSSSSR---EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAE 102
LG + +R E+ +++ +T + H P AH+ LGL G+ +A +++ +A
Sbjct: 740 LGNAYFARGDLEQAIAAYRTAIEH----KPDFGQAHYRLGLALWERGEVAEARAAFHRAI 795
Query: 103 EILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSD 162
E+ E + Q +++ ++ LE EL+ L L++++
Sbjct: 796 EV-----------EPQAFPQAYYSLGVML-----------LEHGELDAALEALRQAIAQC 833
Query: 163 TRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNC-DCIGNLGIAYFQSGDMEQSAK 221
+ + +LG + L GR++ +IS + + + + NLG AY + GD+ ++ +
Sbjct: 834 ELFPLAYYSLGNVFLAQGRIEDAISAYRTAIEQSSGRFPEALWNLGNAYVRQGDITRAIE 893
Query: 222 CFQDLILKDQNHPAALINYAALLLCKYG 249
++ I + AL + L+L + G
Sbjct: 894 AYRQAIEQTGGRDPALHHNLGLVLLQAG 921
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 121/317 (38%), Gaps = 46/317 (14%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
L+ E E + L+++++ ++ LG LL GR++ +I LA+ P+
Sbjct: 608 LDAGEWEGAIQSLRQAIEQQPEFPEAYDHLGRALLHLGRVEEAIEAYRQALALRPDFVHA 667
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 262
LG+A + +G+++++ + + + + P A +
Sbjct: 668 YHGLGVALYLNGELDEAIRALERALELKPDLPRAHHDLGV-------------------- 707
Query: 263 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
A LD+ A A + +L NAY+ GD + A + +P+
Sbjct: 708 ALLDRGEIERAIAAFQAAIQTAGRPYPEGYYDLGNAYFARGDLEQAIAAYRTAIEHKPDF 767
Query: 323 MSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEP---PIAWAGFAAVQ 379
Y + ++ + E ++ A+ R +++EP P A+ +
Sbjct: 768 GQAHYRLGLALWERGEVAE-----------ARAAFHR---AIEVEPQAFPQAYYSLGVML 813
Query: 380 KTHHEVAAAFETEENELSKMEECAGAGES---AFLDQA---SAVNVAKECLLAALKADPK 433
H E+ AA E +++ E A S FL Q A++ + + + P+
Sbjct: 814 LEHGELDAALEALRQAIAQCELFPLAYYSLGNVFLAQGRIEDAISAYRTAIEQSSGRFPE 873
Query: 434 AAHIWANLANAYYLTGD 450
A +W NL NAY GD
Sbjct: 874 A--LW-NLGNAYVRQGD 887
>gi|320352889|ref|YP_004194228.1| hypothetical protein Despr_0763 [Desulfobulbus propionicus DSM
2032]
gi|320121391|gb|ADW16937.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfobulbus
propionicus DSM 2032]
Length = 210
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
+P +L ++ +L++ ++ + + LGLI ++GR+ +I+ L + +D + + +
Sbjct: 6 KPADLSAVIGELEKIVEEKPNNVMARHHLGLIYRQAGRIDEAIAQLEKAIELDNQSMESM 65
Query: 204 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGA 263
NLG +F GD +++ + Q + + A +N L+ G V
Sbjct: 66 INLGAIFFDRGDTDRALELNQQALAISPDMAEAHVNI-GLIRQHRGEV------------ 112
Query: 264 CLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
D+A A C A++ DPK W NL +AY + + +A LEP+
Sbjct: 113 --DKAVA------CYSKAVQIDPKLITAWINLTSAYTMLEQDDKAVDAARQAVTLEPDSA 164
Query: 324 STRYAVAVS-----RIKDAERSQEPTEQLSWA 350
R +AV+ +++R+ E ++L ++
Sbjct: 165 MARNNLAVALYFKGDFAESQRNMEKAKELGYS 196
>gi|196228972|ref|ZP_03127838.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
gi|196227253|gb|EDY21757.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
Length = 555
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 21/169 (12%)
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
L++ + W+ LGL++L+ GR ++ ++ +A+ P N +LG+AY G
Sbjct: 29 LRQIVAVQPNHTSAWHQLGLVVLQLGRPAEAVDLIRQAVALQPGNAALHSDLGVAYRMRG 88
Query: 215 DMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 274
D+E++ F++ + + HP A + L G L AG + E A SA+
Sbjct: 89 DLEEAITSFRNAL---RLHPGAGHTHRNL-----GDALLAAGQS--EEAIASYRSAI--- 135
Query: 275 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A P A NL N Y G + C ++A LEP +
Sbjct: 136 --------AAQPTDAGAHNNLGNVYLHLGQLEDAAACYQRAVDLEPRLI 176
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 77/193 (39%), Gaps = 30/193 (15%)
Query: 43 QSGLGTSSSSR---EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYE 99
S LG + R EE ++S + L R P H H LG GQ +A++SY
Sbjct: 77 HSDLGVAYRMRGDLEEAITSFRNAL----RLHPGAGHTHRNLGDALLAAGQSEEAIASYR 132
Query: 100 KAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESM 159
A + D L V +H Q LE+ + + ++
Sbjct: 133 SA---IAAQPTDAGAHNNLGNVYLHLGQ--------------------LEDAAACYQRAV 169
Query: 160 QSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 219
+ R + LG +L K R + + +LA+DPN + N+G+AY++ G ++
Sbjct: 170 DLEPRLIQAQSNLGDMLTKLDRPEEGLVCAQRVLALDPNFAEGHLNMGVAYWRMGHFAEA 229
Query: 220 AKCFQDLILKDQN 232
C++ I + N
Sbjct: 230 ETCYRRAIALNPN 242
>gi|427734378|ref|YP_007053922.1| Flp pilus assembly protein TadD [Rivularia sp. PCC 7116]
gi|427369419|gb|AFY53375.1| Flp pilus assembly protein TadD [Rivularia sp. PCC 7116]
Length = 370
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 13/188 (6%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
L+ L+ + + E+++ + A + LGL L K G+ +++I+ L V+P +
Sbjct: 100 LQQNRLDAAVQEYGEAIRLNPNLAEAYYNLGLALHKQGQNEAAITAYRQALVVEPTMANA 159
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY---------AALLLCKYGSVLA 253
NLG+A +Q G E++ +Q I D+N+ A N AA + Y VL
Sbjct: 160 NYNLGLALYQQGQTEEAIAAYQQSINLDRNNANAYFNLGLALQEQGDAAKAIIAYREVLQ 219
Query: 254 ----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 309
A A G L A E + A++ P + L A+Y G+++ +
Sbjct: 220 LSPNNAAAYNNLGNLLVARGQTPEAIETYIQAIRKVPNNPSAYYKLGVAFYKQGEYKKAQ 279
Query: 310 KCLEKAAK 317
+ L +A K
Sbjct: 280 QVLRRAHK 287
>gi|157879370|pdb|1NA0|A Chain A, Design Of Stable Alpha-Helical Arrays From An Idealized
Tpr Motif
gi|157879371|pdb|1NA0|B Chain B, Design Of Stable Alpha-Helical Arrays From An Idealized
Tpr Motif
Length = 125
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 22/143 (15%)
Query: 194 AVDP-NNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVL 252
A+DP N+ + NLG AY++ GD +++ + +Q + D N+ A N L
Sbjct: 2 AMDPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYN------------L 49
Query: 253 AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 312
A G+ + A E AL+ DP A W NL NAYY GD+ + +
Sbjct: 50 GNAYYKQGD---------YDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYY 100
Query: 313 EKAAKLEPNCMSTRYAVAVSRIK 335
+KA +L+PN + + ++ K
Sbjct: 101 QKALELDPNNAEAKQNLGNAKQK 123
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+ +E + +++++ D A W LG K G +I L +DPNN + NL
Sbjct: 24 DYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNL 83
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 239
G AY++ GD +++ + +Q + D N+ A N
Sbjct: 84 GNAYYKQGDYDEAIEYYQKALELDPNNAEAKQN 116
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
A W LG K G +I L +DPNN + NLG AY++ GD +++ + +Q
Sbjct: 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQK 68
Query: 226 LILKDQNHPAALIN 239
+ D N+ A N
Sbjct: 69 ALELDPNNAEAWYN 82
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%)
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 335
E AL+ DP A W NL NAYY GD+ + + +KA +L+PN Y + + K
Sbjct: 30 EYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK 89
Query: 336 DAERSQ 341
+ +
Sbjct: 90 QGDYDE 95
>gi|67920262|ref|ZP_00513782.1| TPR repeat:Sel1-like repeat:Sel1-like repeat [Crocosphaera watsonii
WH 8501]
gi|67857746|gb|EAM52985.1| TPR repeat:Sel1-like repeat:Sel1-like repeat [Crocosphaera watsonii
WH 8501]
Length = 353
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 26/195 (13%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+LEE + K++++ D + +N +G L K G+L+ +I+ + +DPN+ N+
Sbjct: 75 KLEEATAAYKKAIELDPNYSFAYNNMGNALRKQGKLEEAIAAYKKAIELDPNDAFAYNNM 134
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G+A G +E++ ++ I D N+ A N G L+
Sbjct: 135 GLALDDQGKLEEAIAAYKKAIELDPNYATAYYNM---------------------GNALN 173
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
+ + A A++ DP + + N+ A G + + +KA ++ PN
Sbjct: 174 RQGKLEEAIAAYKKAIELDPNYSFAYNNMGVALRKQGKYDEAIAAYKKAIEINPN----- 228
Query: 327 YAVAVSRIKDAERSQ 341
YA A + + A R Q
Sbjct: 229 YAFAYNNMGVALRKQ 243
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 75/186 (40%), Gaps = 26/186 (13%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
++ + D+ A+ + +GL L K G+L+ + + + +DPN N+G A + G
Sbjct: 50 RQIISIDSNNAIAYFYIGLALRKQGKLEEATAAYKKAIELDPNYSFAYNNMGNALRKQGK 109
Query: 216 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 275
+E++ ++ I D N A A G LD + A
Sbjct: 110 LEEAIAAYKKAIELDPND---------------------AFAYNNMGLALDDQGKLEEAI 148
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 335
A++ DP A + N+ NA G + +KA +L+PN Y+ A + +
Sbjct: 149 AAYKKAIELDPNYATAYYNMGNALNRQGKLEEAIAAYKKAIELDPN-----YSFAYNNMG 203
Query: 336 DAERSQ 341
A R Q
Sbjct: 204 VALRKQ 209
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 74/156 (47%), Gaps = 23/156 (14%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P +A A+ +GL G+ +A+++Y+KA E+ ++A
Sbjct: 125 PNDAFAYNNMGLALDDQGKLEEAIAAYKKAIEL-----------------DPNYATAYY- 166
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+ N+L+++ +LEE ++ K++++ D + +N +G+ L K G+ +I+
Sbjct: 167 --NMGNALNRQ---GKLEEAIAAYKKAIELDPNYSFAYNNMGVALRKQGKYDEAIAAYKK 221
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
+ ++PN N+G+A + G +++ ++ I
Sbjct: 222 AIEINPNYAFAYNNMGVALRKQGKYDEAIAAYKKAI 257
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/149 (20%), Positives = 67/149 (44%), Gaps = 25/149 (16%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A A++ +G R G+ +A+++Y+KA E+ P
Sbjct: 159 PNYATAYYNMGNALNRQGKLEEAIAAYKKAIEL---------DPNY-------------- 195
Query: 132 ESSGDNSLDKELEPE-ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
S N++ L + + +E ++ K++++ + A +N +G+ L K G+ +I+
Sbjct: 196 -SFAYNNMGVALRKQGKYDEAIAAYKKAIEINPNYAFAYNNMGVALRKQGKYDEAIAAYK 254
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQS 219
+ ++PN+ N+G+A G +++
Sbjct: 255 KAIEINPNDAFGYNNMGLALDDQGKYDEA 283
>gi|376003617|ref|ZP_09781425.1| hypothetical protein ARTHRO_1550003 [Arthrospira sp. PCC 8005]
gi|375327915|emb|CCE17178.1| hypothetical protein ARTHRO_1550003 [Arthrospira sp. PCC 8005]
Length = 499
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 24/183 (13%)
Query: 139 LDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPN 198
LDK+ ++ E +S K S+ ++ NT G +LLK G + +++S L + ++PN
Sbjct: 81 LDKQ---NKIAEAISVAKISLNLKPDSWILNNTYGWLLLKRGYIYTAVSYLQKGIELNPN 137
Query: 199 NCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGAN 258
NLG AY + + + Q I AL ++ K G VL G
Sbjct: 138 FFWLHYNLGDAYLRQQRLSDAINSVQQAI--------ALNPLSSDAHNKLGEVLLEKGEI 189
Query: 259 TGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 318
T AC +A A+N P +A + NL NA TG + S C +A ++
Sbjct: 190 TKAIACFHKAIAIN-------------PNSAWYYQNLGNAVAQTGSFKQSRACYTRAIQI 236
Query: 319 EPN 321
PN
Sbjct: 237 NPN 239
>gi|257059198|ref|YP_003137086.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802]
gi|256589364|gb|ACV00251.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802]
Length = 810
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 21/176 (11%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+LEE ++ ++++Q + A +N LG L G+L+ +I+ + ++PN NL
Sbjct: 112 KLEEAIAAYQKAIQLNPNFAQAYNNLGNALSDQGKLEEAIAAYQKAIQLNPNFTQAYYNL 171
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
GIA G +E++ +Q I + N+ A N L + LD
Sbjct: 172 GIALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGVALF---------------DQGKLD 216
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
+A A A++ DP A+ + NL A Y G + +KA +L PN
Sbjct: 217 EAIA------AYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLNPNL 266
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 82/193 (42%), Gaps = 26/193 (13%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E ++ ++++Q D A +N LGL L G+ +I+ + ++PN NLG
Sbjct: 352 DEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDEAITAYQKAIQLNPNFALAYNNLGN 411
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
A + G E++ +Q I + N AL G+ L+ G D+A
Sbjct: 412 ALYSQGKREEAIAAYQKAIQLNPNF--------ALAYNNLGNALSDQGKR-------DEA 456
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 328
A A++ +P A + NL NA G + +KA +L PN +A
Sbjct: 457 IA------AYQKAIQLNPNFALAYNNLGNALSDQGKLNEAIATYQKAIQLNPN-----FA 505
Query: 329 VAVSRIKDAERSQ 341
+A + + +A + Q
Sbjct: 506 LAYNNLGNALKDQ 518
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 72/178 (40%), Gaps = 21/178 (11%)
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
+ ++ D A +N LG L G+L +I+ + ++PN+ D NLG A + G
Sbjct: 52 FRRVIELDPNLADAYNNLGNALYYQGKLDEAIAAYQKAIQLNPNDADAYNNLGNALYYQG 111
Query: 215 DMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 274
+E++ +Q I + N A N G+ L+ G L++A A
Sbjct: 112 KLEEAIAAYQKAIQLNPNFAQAYNN--------LGNALSDQGK-------LEEAIA---- 152
Query: 275 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 332
A++ +P + NL A G + +KA +L PN Y + V+
Sbjct: 153 --AYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGVA 208
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 21/155 (13%)
Query: 178 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL 237
K G+ + ++ ++ +DPN D NLG A + G ++++ +Q I + N A
Sbjct: 41 KMGKYTEAEAIFRRVIELDPNLADAYNNLGNALYYQGKLDEAIAAYQKAIQLNPNDADAY 100
Query: 238 INYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 297
N L + L++A A A++ +P A + NL N
Sbjct: 101 NNLGNALYYQ---------------GKLEEAIA------AYQKAIQLNPNFAQAYNNLGN 139
Query: 298 AYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 332
A G + +KA +L PN Y + ++
Sbjct: 140 ALSDQGKLEEAIAAYQKAIQLNPNFTQAYYNLGIA 174
>gi|318040539|ref|ZP_07972495.1| TPR repeat-containing protein [Synechococcus sp. CB0101]
Length = 590
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 102/236 (43%), Gaps = 40/236 (16%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI---LLRCEADIARPELLSLVQIHHAQC 128
P NA A LG LG+ KAV S+ +A + + + A++ +L IH
Sbjct: 77 PNNAEAWLNLGTAQHALGRSAKAVESFRQAASLKPTMAKAYANLGH----ALQAIHDLPG 132
Query: 129 LLPESSGDNSLDKELEPE-------------ELEEILSKLKESMQSDTRQAVVWNTLGLI 175
L S SL + L PE + E ++ L++++ + N LGL
Sbjct: 133 ALQAYSQALSL-QPLYPEVLSARGVALRKQGHINESIASLQQAINQRSPYPEALNNLGLS 191
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
L ++G+L+ +++ LA+ P + + + NLG+A + G ++Q+ CFQ + + +P
Sbjct: 192 LQEAGQLEEALNCFEQALALTPEHPEILSNLGLALMEQGRIDQAKTCFQQALNYNPLYPE 251
Query: 236 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 291
A + L C +G D A A+ C L L+ PKA H+
Sbjct: 252 A---HRHLAYCVHGR---------------DDAEPEQAARAC-LEELQDHPKAYHL 288
>gi|307168162|gb|EFN61441.1| Tetratricopeptide repeat protein 37 [Camponotus floridanus]
Length = 1299
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG-DMEQSAKCFQDLI 227
W T G I G S+ + + D NN +C+ LG Y + G D+E+S +C+ +
Sbjct: 446 WLTFGKIYWDMGDYNHSLMAFLNGVQADRNNWECMVYLGHYYREHGNDVERSRRCYHTAL 505
Query: 228 LKDQNHPAALINYA-ALLLCKYGS----VLAGAGANTGEGA----------CLDQASAVN 272
+ N A I + A L K +L G GA LDQ A
Sbjct: 506 QINPNSEEAGIGLSTAYRLLKNTDANIHLLQRVTMQQGTGAKWAWLQLGLQHLDQGDATE 565
Query: 273 VAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
K L ++ADP H W +LA+AY + G H S+ K ++A +L P +
Sbjct: 566 AIK-ALQHVIRADPNDNHSWESLADAYLVRGAHTSALKSYQRALQLSPGAL 615
>gi|113475981|ref|YP_722042.1| hypothetical protein Tery_2349 [Trichodesmium erythraeum IMS101]
gi|110167029|gb|ABG51569.1| TPR repeat [Trichodesmium erythraeum IMS101]
Length = 649
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 134/348 (38%), Gaps = 53/348 (15%)
Query: 140 DKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNN 199
DK + EE E+ L+ +++Q + + A +N G++ K G+ +++ L+ + ++P
Sbjct: 298 DKHHDREEFEQALADYNQAIQLNPKYADAYNNRGIVYRKQGKYDLALADLNQAIQLNPKY 357
Query: 200 CDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANT 259
D N G Y+ G DL L D N A L KY A A
Sbjct: 358 ADAYKNRGNVYYNQGKY--------DLALADYNQ-------AIQLNPKY------AEAYN 396
Query: 260 GEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLE 319
G D ++A A++ +PK A+ + N Y G + + +A +L
Sbjct: 397 NRGLVYDDQGKYDLAIAEFNQAIQLNPKYAYAYNNRGVVYDDQGKYDLALADYNQAIQLN 456
Query: 320 PN---CMSTRYAVAVSR------IKDAERSQEPTEQLSWAGNEMASILRE---------- 360
P + R V + + I D ++ + +L+ A N ++ R+
Sbjct: 457 PKYAEAYNNRGGVYLEQGKYDLAIADYNQAIQLNPKLAEAYNNRGAVYRKQGKYDLALAD 516
Query: 361 -GDPVQIEPPIAW-----AGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQA 414
+ +++ P W G + +++A A ++ +L+ + A D
Sbjct: 517 YNESIRLNNPQLWLPYNNRGLVYNDQRKYDLALADYSQAIQLNPKDAYAYYNRGNVYDDQ 576
Query: 415 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVL 462
++A A++ +PK ANAYY G + +EK +
Sbjct: 577 GKYDLAIADYSQAIQLNPK-------YANAYYTRGLTNKDQRNMEKAI 617
>gi|428212874|ref|YP_007086018.1| capsular polysaccharide biosynthesis protein [Oscillatoria
acuminata PCC 6304]
gi|428001255|gb|AFY82098.1| capsular polysaccharide biosynthesis protein [Oscillatoria
acuminata PCC 6304]
Length = 791
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 73/175 (41%), Gaps = 25/175 (14%)
Query: 147 ELEEILSKLKES--MQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIG 204
ELE + K + +Q D +A N LGL+L K R + +IS + ++PN +
Sbjct: 227 ELESAIDCFKSTIELQPDWNEAH--NNLGLVLRKINREEEAISSFKKAIEINPNFAEAYR 284
Query: 205 NLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGAC 264
NLG Q G +E +A C +D I N A A+ G
Sbjct: 285 NLGTTLQQQGKLEAAAACLRDCIKIQPNF---------------------ALAHGNLGYV 323
Query: 265 LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLE 319
L+Q ++ AK L A+ +P A + NL N + G+ S C + A K +
Sbjct: 324 LEQQGKLDEAKASLRHAIALEPDLAMAYGNLGNILHREGELEESISCFQNAIKYD 378
>gi|390443928|ref|ZP_10231713.1| hypothetical protein A3SI_07739 [Nitritalea halalkaliphila LW7]
gi|389665701|gb|EIM77165.1| hypothetical protein A3SI_07739 [Nitritalea halalkaliphila LW7]
Length = 468
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 112/293 (38%), Gaps = 49/293 (16%)
Query: 75 AHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESS 134
A +LLG Y+ G+ KA+ +Y+ + LR + A +L +L E
Sbjct: 135 AEVQYLLGNFYRANGENEKALEAYKNC--VKLRISHEDALFQL----------AMLTEEE 182
Query: 135 GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLA 194
G+ EEIL +E + D + W LG++ + GR + +I L
Sbjct: 183 GN-----------FEEILDFYREFIDQDPYSSGAWYNLGVVYNRLGRFEEAIQAYEYALL 231
Query: 195 VDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-------------------LKDQNHPA 235
+D + NLG AY E + + +Q+ I L D +
Sbjct: 232 IDDSFASAYFNLGNAYMNLEKFELAREAYQNTINCEGANAENSCYLGAAYEKLGDIDMAF 291
Query: 236 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 295
+A L +Y G G C+ + A A+K A+ + L
Sbjct: 292 KYFKKSAKLDPEYEDAFFGL------GMCMLRRDKYFEAVHYFKKAIKLADDNANFYVGL 345
Query: 296 ANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLS 348
A+A Y G+ +S + E+A LEP + T +++ + D R +E + ++
Sbjct: 346 ADAEYKLGNLAASSEAYEEAINLEPGILETYVNLSIIYL-DQNRFEEAIDVIN 397
>gi|390949284|ref|YP_006413043.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiocystis violascens DSM 198]
gi|390425853|gb|AFL72918.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiocystis violascens DSM 198]
Length = 749
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 80/190 (42%), Gaps = 16/190 (8%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
E E KL + SD A W LG +L K Q ++++L L++DP++ +C+ L
Sbjct: 152 EGETAARKLTKRYPSD---AFGWRALGTLLFKRDDYQGALTMLQKALSIDPHHAECLNTL 208
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAAL---------INYAALLLCKYGSVLAGAG- 256
G A G ++ CF + D ++ AA +N + Y LA A
Sbjct: 209 GNALNNLGRAREAIDCFNRALEIDPDYAAAHNSKGVALKDLNRMEEAIACYRRALALAPD 268
Query: 257 ---ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
A+ GA ++ A EC AL +P+ A ++NL A G S E
Sbjct: 269 LAEAHNNLGAAFKGVGRLDEALECHRQALAINPRYAEAYSNLGGALQGLGRLDESIAAYE 328
Query: 314 KAAKLEPNCM 323
++ +L P +
Sbjct: 329 RSLQLNPKLI 338
>gi|225850039|ref|YP_002730273.1| TPR repeat protein [Persephonella marina EX-H1]
gi|225646624|gb|ACO04810.1| TPR repeat protein [Persephonella marina EX-H1]
Length = 937
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 111/258 (43%), Gaps = 39/258 (15%)
Query: 158 SMQSDTRQAVVWNTLGLILLKSGRL--------------QSSISVLSSLLAVDPNNCDCI 203
++ D+ A W LGL KSG++ +++I + + ++PN D
Sbjct: 125 TVNIDSNLANAWYNLGLSWAKSGKIHKEKGNLDDAMNCFKNAIRYYENTVKINPNFADAW 184
Query: 204 GNLGIAYFQSG-------DMEQSAKCFQDLILKDQNHPAALIN-YAALLLCKYGSVLAGA 255
NLG+++ +SG +++ + CF++ I +N A IN A G A +
Sbjct: 185 YNLGLSWARSGEIHKEKGNLDDAMNCFKNAIRYCKN--AVKINPNLANAWSNLGFSWAKS 242
Query: 256 GANTGEGACLDQASAV--NVAKECLLAALKADPKAAHIWANLANAYYLTGD-HRSSG--- 309
G E LD A N + C A+K +P A+ W NL ++ G+ H+ G
Sbjct: 243 GEIRKEKGNLDDAMNCFKNAIRYCE-NAVKINPNLANAWYNLGVSWQKLGEIHKEKGNIF 301
Query: 310 ----KCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILRE-GDPV 364
+CLE A K+ PN Y + VS + E +E L A N + +R + V
Sbjct: 302 DNSIRCLENAVKINPNFADAWYNLGVSWARSGEIHKEKG-NLDDAMNCFKNAIRYCENAV 360
Query: 365 QIEPPI--AWAGFAAVQK 380
I+P + AW+ + +
Sbjct: 361 NIDPNLANAWSDLGILWR 378
>gi|333987253|ref|YP_004519860.1| hypothetical protein MSWAN_1038 [Methanobacterium sp. SWAN-1]
gi|333825397|gb|AEG18059.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 329
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 77/191 (40%), Gaps = 30/191 (15%)
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
G+ LL G+ S+ L L +DPN+ + + + G+A + G E+S KCF ++ D+
Sbjct: 16 GVKLLNQGKYGESLECLDKALELDPNDREILHSKGVALKELGKFEESIKCFDKVLELDKK 75
Query: 233 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA-------KECLLA----- 280
+A N G + A G C D+A +N K LL
Sbjct: 76 VYSAWNN--------KGFIFAKLGQQRDALKCYDKALEINPKYFDAWNNKGGLLTKLGKY 127
Query: 281 ---------ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 331
AL+ +PK W N A + G H C +K ++ P T Y V
Sbjct: 128 EESLKYYNKALELNPKYLKAWNNKAVVFGKLGKHEEELNCFDKILEMNPEDTDTWYNKGV 187
Query: 332 SRIKDAERSQE 342
S +++ E QE
Sbjct: 188 S-LQEMELYQE 197
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 99/264 (37%), Gaps = 58/264 (21%)
Query: 82 GLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDK 141
G ++ +LGQ A+ Y+KA EI P+ ++ LL +
Sbjct: 84 GFIFAKLGQQRDALKCYDKALEI---------NPKYFD--AWNNKGGLLTKLG------- 125
Query: 142 ELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCD 201
+ EE L ++++ + + WN ++ K G+ + ++ +L ++P + D
Sbjct: 126 -----KYEESLKYYNKALELNPKYLKAWNNKAVVFGKLGKHEEELNCFDKILEMNPEDTD 180
Query: 202 CIGNLGIAYFQSGDMEQSAKCFQDLILK-DQNHPAALINYAALL--LCKYGSVLAGAGAN 258
N G++ Q ++ Q A D++LK D+ +A+ N + L KY L
Sbjct: 181 TWYNKGVS-LQEMELYQEALKSYDMVLKLDETDLSAINNKGVIFKELGKYNKALE----- 234
Query: 259 TGEGACLDQASAVNVAK---------------------ECLLAALKADPKAAHIWANLAN 297
C D+ +N K C LK +P W +
Sbjct: 235 -----CFDKVLELNPNKIETMGNKGITFRELGKFPESLNCFNKLLKLNPNDKMGWYHKGL 289
Query: 298 AYYLTGDHRSSGKCLEKAAKLEPN 321
A G H + K + + KL+P+
Sbjct: 290 ALEKLGKHVEAIKSFDNSLKLDPD 313
>gi|91201886|emb|CAJ74946.1| hypothetical protein kuste4184 [Candidatus Kuenenia
stuttgartiensis]
Length = 423
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 125/328 (38%), Gaps = 64/328 (19%)
Query: 6 DVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLKTGLV 65
DV V+G+ S S+ +AL+ A LG + ++ +++T L
Sbjct: 131 DVYRVQGE--------YSEAVSEYKNALKINPKAVETMYNLGVVYVNNDQTEEAIQTLLD 182
Query: 66 HVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHH 125
V P AHF LG +Y G P A++++ K EI R +L H
Sbjct: 183 AVGIN-PNYTDAHFFLGQIYLNNGLPDNALNAFSKVTEINPRH----------ALAHYHL 231
Query: 126 AQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSS 185
+ + D ++ + K+S++ D + V +LG++ ++
Sbjct: 232 GLTFYEKGNVDGAV-------------ASYKKSIEIDAKNPQVHYSLGIVYSDEKLFDNA 278
Query: 186 ISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL 245
I +++ +DP+N D LG+AY + ++
Sbjct: 279 IEEFRTVVKLDPDNADAHYRLGLAYANKRTLVKAV------------------------- 313
Query: 246 CKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDH 305
SV A A+ A++ A L A++ +P I+ +L NAY + D
Sbjct: 314 ---SSVQKAASAHYNIKNPYSDKRALDEAITSLQMAIEINPYNPEIYFDLGNAY--SQDR 368
Query: 306 R--SSGKCLEKAAKLEPNCMSTRYAVAV 331
R + + LE+ +++PN Y +A+
Sbjct: 369 RLDEAARALEETIRIDPNFAKAHYGLAL 396
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 23/185 (12%)
Query: 54 EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI--------- 104
+E +SS + + R P A AHF L + Y +A+S+ KA EI
Sbjct: 38 DEVISSYQKAI----RINPGLAEAHFNLAIAYNSRTMLDEAISALVKAVEINPKYKEAYL 93
Query: 105 ---LLRCEA---DIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKES 158
LL E D A+ L S +Q+ L E GD + E E +S+ K +
Sbjct: 94 QLGLLYMEKEMWDNAKATLSSSLQLDTDSFLAHEKLGDVYRVQG----EYSEAVSEYKNA 149
Query: 159 MQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQ 218
++ + + LG++ + + + + +I L + ++PN D LG Y +G +
Sbjct: 150 LKINPKAVETMYNLGVVYVNNDQTEEAIQTLLDAVGINPNYTDAHFFLGQIYLNNGLPDN 209
Query: 219 SAKCF 223
+ F
Sbjct: 210 ALNAF 214
>gi|169832335|ref|YP_001718317.1| hypothetical protein Daud_2198 [Candidatus Desulforudis audaxviator
MP104C]
gi|169639179|gb|ACA60685.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Desulforudis
audaxviator MP104C]
Length = 209
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 25/181 (13%)
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
EP+ EE +++ K ++ + A LG+ +++ RL + + +
Sbjct: 4 EPQGSEEFIAEQKRILKENEDCATAAYNLGVAMMQQNRLDEAREHFEKAIETGSRMFEAY 63
Query: 204 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN--YAALLLCKYGSVLAGAGANTGE 261
NLG YF+ GDME+ A+ + + + + N +A L + K TGE
Sbjct: 64 VNLGYIYFKEGDMEKVAEVNRKAVELEPRYARGYANLGFAYLQMAK-----------TGE 112
Query: 262 GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
A E L AL+ +P+ A W NLANAY GD + + E+ L PN
Sbjct: 113 ------------AIEALQKALELNPEIAQAWNNLANAYLQRGDVDKAIEVGERLIALAPN 160
Query: 322 C 322
Sbjct: 161 F 161
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E + L+++++ + A WN L L+ G + +I V L+A+ PN NL +A
Sbjct: 112 EAIEALQKALELNPEIAQAWNNLANAYLQRGDVDKAIEVGERLIALAPNFGLGHNNLAVA 171
Query: 210 YFQSGDMEQSAK 221
Y+ GD ++ K
Sbjct: 172 YYHKGDFPKAVK 183
>gi|406889463|gb|EKD35644.1| hypothetical protein ACD_75C01829G0002 [uncultured bacterium]
Length = 209
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E+L +++++L++ + + + ++ LGL+ +K+GR+ +I L + +D + + + N
Sbjct: 7 EDLPQVIAELEKKCKEHPQSVMAFHHLGLVYMKAGRVAEAIKALEKAIGLDDLSSESMIN 66
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
LG +F G++E++ K+ N A +N + A A+ G
Sbjct: 67 LGAIHFGQGNLEKA---------KELNERALAVNPES------------AQAHANLGLIW 105
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
Q S + A A+K DPK A W NL + + G+ + K +L+P+
Sbjct: 106 QQQSEFDKAIAAYEKAIKQDPKLASAWMNLTSVLTMKGEDARAVIAARKGLELDPDS 162
>gi|150403612|ref|YP_001330906.1| hypothetical protein MmarC7_1699 [Methanococcus maripaludis C7]
gi|150034642|gb|ABR66755.1| TPR repeat-containing protein [Methanococcus maripaludis C7]
Length = 409
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/326 (18%), Positives = 115/326 (35%), Gaps = 45/326 (13%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E+ E+ L S++ D W G+ L G S+
Sbjct: 106 EDYEKALYYFNTSLEIDNSVGKTWFYKGVCLKMLGNYDESVEAFDKSTGNYEEIVLIWNE 165
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
LG Y+Q+ +++ +CF + D+N + G+G C
Sbjct: 166 LGYIYYQNEKYDKAIECFDKALALDRNLKYSF---------------------NGKGLCY 204
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLE---PNC 322
++ ++A EC AL D N +Y ++ + C E A +L P C
Sbjct: 205 EKKEQYDLAIECFDKALLEDEFYYDAIYNKGIIHYNLKNYSVAISCFETALELNNSNPYC 264
Query: 323 MSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEP--PIAWAGFAAVQK 380
+ + L G ++L + VQ++P PI W+G
Sbjct: 265 HFYK-----------------ADSLKGLGKYNEAVLSYKNAVQLDPKNPIFWSGMGLSYN 307
Query: 381 THHEVAAAFETEEN--ELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIW 438
+E + + E +L+ ++ + + + + + C AL+ +P+ + W
Sbjct: 308 YLNEYNLSIQAYEKAAQLNPKDDVSWSNLGYMQYKNKNYSESISCFETALELNPENKYAW 367
Query: 439 ANLANAYYLTGDHRSSGKCLEKVLMV 464
L N+Y L ++ + C EK + +
Sbjct: 368 NGLGNSYILIKNYEKALMCYEKAIKI 393
>gi|425449527|ref|ZP_18829366.1| TPR repeat protein (modular protein) [Microcystis aeruginosa PCC
7941]
gi|389763752|emb|CCI09797.1| TPR repeat protein (modular protein) [Microcystis aeruginosa PCC
7941]
Length = 1038
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 106/262 (40%), Gaps = 40/262 (15%)
Query: 138 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 197
+L K+L+ LEE ++ ++ + + A W+ LG+I+ G++ +I L ++P
Sbjct: 382 TLQKQLK---LEEAIALYQQLINQSPQYAAAWHQLGVIMDSLGQIDQAILAYKQALLINP 438
Query: 198 NNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGA 257
N + NLGI GD++++ CF I +QN+ A A
Sbjct: 439 NYAESHNNLGIIAVSKGDLDEAIICFNQAIRSNQNY---------------------AFA 477
Query: 258 NTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAK 317
+ G L + A A++ +P NL N L G + + A K
Sbjct: 478 DNNLGLVLQMQDKLGDAVVNFQEAIRKNPNYPEAHFNLGNVLQLQGKIEEAIAYFQTAIK 537
Query: 318 LEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAA 377
L P +Y A + + A Q+ E S+ ++ +Q P A+A +
Sbjct: 538 LNP-----KYIKAYNSLALALGRQDKVE-------AAMSVFKQALAIQPNSPEAFACLFS 585
Query: 378 VQKTHHEVAAAFETEENELSKM 399
++ E+ +ET E +L ++
Sbjct: 586 MK----EMTCNWETREADLIQL 603
>gi|297568796|ref|YP_003690140.1| TPR repeat-containing protein [Desulfurivibrio alkaliphilus AHT2]
gi|296924711|gb|ADH85521.1| TPR repeat-containing protein [Desulfurivibrio alkaliphilus AHT2]
Length = 197
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 15/125 (12%)
Query: 124 HHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQ 183
HH Q L PE + +LS L++++ + W LG + + R +
Sbjct: 49 HHPQGLSPEQ---------------QRVLSSLEQAVAENPENVQAWTQLGHLYFDTDRYE 93
Query: 184 SSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL 243
+I S L + P++ D + +LG+ Y ++G E + F+ I D H A N +
Sbjct: 94 QAIEAYSRSLELRPDDADVVTDLGVMYRRNGQPELAVTSFRQAIEIDPRHETARFNLGVV 153
Query: 244 LLCKY 248
LL +
Sbjct: 154 LLHDF 158
>gi|425437323|ref|ZP_18817742.1| TPR repeat protein (modular protein) [Microcystis aeruginosa PCC
9432]
gi|389677704|emb|CCH93372.1| TPR repeat protein (modular protein) [Microcystis aeruginosa PCC
9432]
Length = 1059
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 106/262 (40%), Gaps = 40/262 (15%)
Query: 138 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 197
+L K+L+ LEE ++ ++ + + A W+ LG+I+ G++ +I L ++P
Sbjct: 403 TLQKQLK---LEEAIALYQQLINQSPQYAAAWHQLGVIMDSLGQIDQAILAYKQALLINP 459
Query: 198 NNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGA 257
N + NLGI GD++++ CF I +QN+ A A
Sbjct: 460 NYAESHNNLGIIAVSKGDLDEAIICFNQAIRSNQNY---------------------AFA 498
Query: 258 NTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAK 317
+ G L + A A++ +P NL N L G + + A K
Sbjct: 499 DNNLGLVLQMQDKLGDAVVNFQEAIRKNPNYPEAHFNLGNVLQLQGKIEEAIAYFQTAIK 558
Query: 318 LEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAA 377
L P +Y A + + A Q+ E S+ ++ +Q P A+A +
Sbjct: 559 LNP-----KYIKAYNSLALALGRQDKVE-------AAMSVFKQALAIQPNSPEAFACLFS 606
Query: 378 VQKTHHEVAAAFETEENELSKM 399
++ E+ +ET E +L ++
Sbjct: 607 MK----EMTCNWETREADLIQL 624
>gi|374814596|ref|ZP_09718333.1| hypothetical protein TpriZ_12085 [Treponema primitia ZAS-1]
Length = 183
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 26/170 (15%)
Query: 170 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 229
N G+ L ++ R +I + L ++P N NLGIA ++GD E++ FQ +
Sbjct: 8 NDSGIALTEANRPYEAIPLFRKALIMEPENPLLWMNLGIAQQRTGDYEEALNSFQRAVYI 67
Query: 230 DQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAA 289
D + A ++ G + +++A+EC +AL D +
Sbjct: 68 DDDLTEAWVSM---------------------GLIYYEIEQLDLAEECYHSALVRDGNSP 106
Query: 290 HIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAER 339
W NL Y++ G + + C E+A + P Y A+ ++DA R
Sbjct: 107 KTWNNLGVLYFVEGSYEEARHCFEEAVTMLP-----MYYEALFNLRDACR 151
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+ EE L+ + ++ D W ++GLI + +L + S L D N+ NL
Sbjct: 53 DYEEALNSFQRAVYIDDDLTEAWVSMGLIYYEIEQLDLAEECYHSALVRDGNSPKTWNNL 112
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 239
G+ YF G E++ CF++ + + AL N
Sbjct: 113 GVLYFVEGSYEEARHCFEEAVTMLPMYYEALFN 145
>gi|218439885|ref|YP_002378214.1| hypothetical protein PCC7424_2942 [Cyanothece sp. PCC 7424]
gi|218172613|gb|ACK71346.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424]
Length = 632
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 131/313 (41%), Gaps = 49/313 (15%)
Query: 19 GKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSR---EEKVSSLKTGLVHVARKMPKNA 75
GK I++ ++A+E + S LG + S++ EE +++ + P A
Sbjct: 108 GKLEEAIAA-YNTAIEINPNYAEVYSNLGFALSNQGKLEEAIAAYNKAI----EINPNYA 162
Query: 76 HAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSG 135
A+ LG+ G+ +A+++Y KA EI P + +++ + G
Sbjct: 163 FAYIGLGIALYNQGKLEEAIAAYNKAIEI---------NP---NYAEVYSNLGFALYNQG 210
Query: 136 DNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAV 195
+LEE ++ +++ + A +N LG+ L G+L+ +I+ ++ + +
Sbjct: 211 -----------KLEEAIAAYNTAIEINPNDAFAYNNLGIALSNQGKLEEAIAAYNTAIEI 259
Query: 196 DPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGA 255
+PN+ NLG+A + G +E++ + I + N A I G
Sbjct: 260 NPNDAFAYNNLGVALYNQGKLEEAIAAYNTAIEINPNDAFAYI---------------GL 304
Query: 256 GANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYL--TGDHRSSGKCLE 313
G + L++A A K LA KAD + H A+ Y L G + E
Sbjct: 305 GIALHDQGKLEEAIAA-YNKTLSLADKKADRASVHTLAHTTLGYALQQQGKLEEAIAEYE 363
Query: 314 KAAKLEPNCMSTR 326
KA K++PN + +
Sbjct: 364 KALKIDPNNTTAQ 376
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 74/175 (42%), Gaps = 21/175 (12%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+LEE ++ +++ + A V+N LG+ L G+L+ +I+ ++ + ++PN + NL
Sbjct: 75 KLEEAIAAYNTAIEINPNYAEVYNNLGVALYYQGKLEEAIAAYNTAIEINPNYAEVYSNL 134
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G A G +E++ + I + N+ A I G G L
Sbjct: 135 GFALSNQGKLEEAIAAYNKAIEINPNYAFAYI---------------------GLGIALY 173
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
+ A A++ +P A +++NL A Y G + A ++ PN
Sbjct: 174 NQGKLEEAIAAYNKAIEINPNYAEVYSNLGFALYNQGKLEEAIAAYNTAIEINPN 228
>gi|428218616|ref|YP_007103081.1| glycosyl transferase family protein [Pseudanabaena sp. PCC 7367]
gi|427990398|gb|AFY70653.1| glycosyl transferase family 9 [Pseudanabaena sp. PCC 7367]
Length = 2670
Score = 56.6 bits (135), Expect = 3e-05, Method: Composition-based stats.
Identities = 63/289 (21%), Positives = 118/289 (40%), Gaps = 38/289 (13%)
Query: 67 VARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSL-VQIHH 125
V + P + AH+ LGL Y+++G+ +A++SYE+A I P+ + + V + +
Sbjct: 97 VIQLQPDHKEAHYYLGLAYRQVGRLTEAIASYERAIAI---------NPDRIEIQVALGN 147
Query: 126 AQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSS 185
AQ L +L++ + +++ + A N LG ++ L +
Sbjct: 148 AQ---------------LSAGQLDQAEQSYRAAIELNPNLAEAHNGLGGVMSNRDLLDQA 192
Query: 186 ISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP---------AA 236
S + + PN D NLG+ F+ ++ ++ Q + + NH AA
Sbjct: 193 ASSYERAIELMPNYADAYANLGMTQFRQKNLLEALANCQQALQHNPNHASTYMVLGLIAA 252
Query: 237 LINYAALLLCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 292
+ L + Y +A A A GA + A AL +P A +
Sbjct: 253 EQDNLGLAIAHYQKAIALNPNYANAYCNLGAAQMRQGEPETAIANYHKALAINPNLAEAY 312
Query: 293 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ 341
NL A+ ++ + ++A + +PN +S A+A +K A+ Q
Sbjct: 313 HNLGEAHSQLYQFTTATEFYQRAIQTKPNYVSAHNALATVYLKQAQPDQ 361
>gi|145553124|ref|XP_001462237.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124430075|emb|CAK94864.1| unnamed protein product [Paramecium tetraurelia]
Length = 2950
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 111/287 (38%), Gaps = 44/287 (15%)
Query: 61 KTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSL 120
K L H + P N A+ LG +YQ L + + C A ++R + +
Sbjct: 2619 KKYLKHALKSSPNNPVANMRLGRIYQTKLNELNSA----------IECFAKVSRVDPTNY 2668
Query: 121 VQIHH-AQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKS 179
++ QC + + EL + + + S++ + + W +G I+ +
Sbjct: 2669 KAYYYMGQCYIQKG-------------ELNKGIENMNMSLKHNQSFGLAWKAVGNIMYEK 2715
Query: 180 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP----- 234
+ ++ + D N+ + LG Y+ EQ+ + ++++ DQN
Sbjct: 2716 NQPAKALRYFQKAIDSDKNDMEAKIGLGNCYYLQEQFEQAIQIYEEISHLDQNEELEYNM 2775
Query: 235 -----------AALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALK 283
A+++Y L + N G C+ A EC +K
Sbjct: 2776 ANCYYMKNDFEEAVLHYQKALSINPDKI--ECYYNLGNTYCI--MEKFEEALECFERVVK 2831
Query: 284 ADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
DPK + + N AN +++ D+ ++ K EKA +L+P + R VA
Sbjct: 2832 DDPKHSAAFYNYANTFFVLQDYENAAKYFEKAVELQPENVDWRNYVA 2878
>gi|330506685|ref|YP_004383113.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
gi|328927493|gb|AEB67295.1| TPR-repeat protein [Methanosaeta concilii GP6]
Length = 705
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 21/195 (10%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
L+E + L + ++ D W+ G I++++GR + + S L +DP N L
Sbjct: 96 LQEAIRSLDQVLRIDQSLDEAWSLKGEIMMETGRYRMAQLCFDSALRLDPGNMTLYNRLA 155
Query: 208 IAYFQSGDMEQSAKCFQ-----------------DLILKDQNHPAALINYAALLLCKYGS 250
+ D + + + ++ DL L +P AL ++ LL
Sbjct: 156 QSQLMLEDYDHALRSYKKALSLEANNTEILFNQGDLFLTLARYPEALNSFNLLLEQNKSD 215
Query: 251 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGK 310
+L A G C Q V+ A+E L+ +P+ W L Y T D+ SS +
Sbjct: 216 IL----ALKGRAECYRQLGQVDRAEEDYYTVLEKNPEDFESWRGLGMVRYATEDYSSSLQ 271
Query: 311 CLEKAAKLEPNCMST 325
++A K+ P+ + T
Sbjct: 272 AFDQALKINPHDIQT 286
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 87/230 (37%), Gaps = 54/230 (23%)
Query: 142 ELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCD 201
+L+ +L++ L +E + D+ + W G ILL + +I + L ++P N D
Sbjct: 396 QLDLGDLDQALQSYEELLGHDSNSSAAWIGRGEILLLQTNIDPAIESFNRALDIEPQNPD 455
Query: 202 CIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL--LLC---KYGS------ 250
+ L A Q G +E++ ++ I ++ ++ Y L +LC +YG
Sbjct: 456 ALMGLAEALHQKGRLEEARSYYEAAIAEE----PSVRGYRGLGNILCAQGEYGQSIPLFE 511
Query: 251 ------------------VLAGAGANTGEGACLDQASAVNV------------------- 273
LA G ++G C ++ ++N
Sbjct: 512 SALSQEPSDTESLMGKGLALAATGNSSGALQCFNEIVSLNPEDSAAWSNRGSIFAALGRY 571
Query: 274 --AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
A+E L A +A IW NL Y L H S + E A +L P+
Sbjct: 572 DEARESLQKAAGISSSSADIWYNLGQVYRLMDRHNQSRQAFENATRLSPD 621
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 13/177 (7%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
+ LG IL G SI + S L+ +P++ + + G+A +G+ + +CF +++
Sbjct: 490 YRGLGNILCAQGEYGQSIPLFESALSQEPSDTESLMGKGLALAATGNSSGALQCFNEIVS 549
Query: 229 KDQNHPAALINYAALL--LCKYG----SVLAGAGANTGEGACLDQASAV-------NVAK 275
+ AA N ++ L +Y S+ AG ++ V N ++
Sbjct: 550 LNPEDSAAWSNRGSIFAALGRYDEARESLQKAAGISSSSADIWYNLGQVYRLMDRHNQSR 609
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 332
+ A + P +W L A TG+ + + K L++A L+P +Y++A++
Sbjct: 610 QAFENATRLSPDDPVLWLELGLAQERTGEAKLALKSLQRAVVLDPKNEFAQYSLALA 666
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 96/279 (34%), Gaps = 54/279 (19%)
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 251
+L DP N + + A GD++Q+ + +++L+ D N AA I
Sbjct: 378 ILGQDPKNARALLGMAKAQLDLGDLDQALQSYEELLGHDSNSSAAWI------------- 424
Query: 252 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 311
G G L + ++ A E AL +P+ LA A + G +
Sbjct: 425 --------GRGEILLLQTNIDPAIESFNRALDIEPQNPDALMGLAEALHQKGRLEEARSY 476
Query: 312 LEKAAKLEPN-----------CMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILRE 360
E A EP+ C Y ++ + A SQEP++ S G +A
Sbjct: 477 YEAAIAEEPSVRGYRGLGNILCAQGEYGQSIPLFESA-LSQEPSDTESLMGKGLALA--- 532
Query: 361 GDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVA 420
A + + +E+ + L+ + A + + + A
Sbjct: 533 ----------ATGNSSGALQCFNEIVS--------LNPEDSAAWSNRGSIFAALGRYDEA 574
Query: 421 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 459
+E L A +A IW NL Y L H S + E
Sbjct: 575 RESLQKAAGISSSSADIWYNLGQVYRLMDRHNQSRQAFE 613
>gi|440755074|ref|ZP_20934276.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
gi|440175280|gb|ELP54649.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
Length = 627
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 82/195 (42%), Gaps = 24/195 (12%)
Query: 138 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 197
+L K+L+ LEE ++ ++ + + A W+ LG+I+ G++ +I L ++P
Sbjct: 382 TLQKQLK---LEEAIALYQQLINQSPQYAPAWHQLGVIMDSLGQIDQAILAYKQALLINP 438
Query: 198 NNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGA 257
N + NLGI GD++++ CF I DQN+ A N L+ + L AG
Sbjct: 439 NYAESHNNLGIIAVSKGDLDEAIICFNQAIRSDQNYAFAENNLG--LVLQMQDKLGDAGV 496
Query: 258 NTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAK 317
E A++ +P NL N L G + + A K
Sbjct: 497 KFQE-------------------AIRKNPNYPEAHFNLGNVLQLQGKIEEAIAYFQTAIK 537
Query: 318 LEPNCMSTRYAVAVS 332
L P + ++A++
Sbjct: 538 LNPKYIKAYNSLALA 552
>gi|260829669|ref|XP_002609784.1| hypothetical protein BRAFLDRAFT_58685 [Branchiostoma floridae]
gi|229295146|gb|EEN65794.1| hypothetical protein BRAFLDRAFT_58685 [Branchiostoma floridae]
Length = 946
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 76/165 (46%), Gaps = 27/165 (16%)
Query: 189 LSSLLA---VDPNNCDCIGNLGIAYFQ-SGDMEQSAKCFQDLILKDQN--HPAALINYAA 242
++SLL +DP++ D LG Y +GD+++S +C+Q DQ+ A A
Sbjct: 13 MTSLLKAAKLDPHHSDTFLYLGHYYRDVAGDVQRSKRCYQKAFDLDQSSEEAGAAFGDAC 72
Query: 243 LLLCK-------YGSVLAGAGANTGEGACL----------DQASAVNVAKECLLAALKAD 285
+ L + Y SV + A A T + A L D AV + L AAL+AD
Sbjct: 73 IALGEEEAGLKLYVSVTSKASAGTAKWAWLRLGLYQLKHGDGTQAV----KSLQAALRAD 128
Query: 286 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
PK H W LA AY G + + K KAA+L P + Y VA
Sbjct: 129 PKDPHCWECLAEAYLSRGGYTGALKAFTKAAELNPEATYSLYQVA 173
>gi|126178334|ref|YP_001046299.1| TPR repeat-containing protein [Methanoculleus marisnigri JR1]
gi|125861128|gb|ABN56317.1| TPR repeat-containing protein [Methanoculleus marisnigri JR1]
Length = 279
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 79/200 (39%), Gaps = 33/200 (16%)
Query: 138 SLDKELEP------------EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSS 185
S+D E P LEE L+ +++ + AV W + + R+ +
Sbjct: 87 SIDPEFAPAWVSRGMLHRRRNRLEEALACYDRAVELNPDSAVAWYNRSGVFVAMHRMDDA 146
Query: 186 ISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL 245
++ +LA+DP+ +LG A+F E++ C+ + D P ++
Sbjct: 147 VACYERVLAIDPHFVAAWTDLGYAHFLGHRHEEAIACYDRAVADD---PGSV-------- 195
Query: 246 CKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDH 305
+ S+ GA GE A EC L DPK A W+ + Y G +
Sbjct: 196 -RVWSLKGGALYALGE---------YRKALECFDKVLSIDPKYAAGWSMKCSVLYHLGMY 245
Query: 306 RSSGKCLEKAAKLEPNCMST 325
R + C +KA ++ P C T
Sbjct: 246 RHALACADKALEINPTCELT 265
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 89/222 (40%), Gaps = 35/222 (15%)
Query: 261 EGACLDQA---SAVNVAKE--------CLLAALKADPKAAHIWANLANAYYLTGDHRSSG 309
EGAC D AV++A++ C L++DP +W N L G + +
Sbjct: 20 EGACTDSTVSRKAVSLAQQGRFPEAIDCFDRVLESDPANVKMWNNKGVFLDLLGRDQDAL 79
Query: 310 KCLEKAAKLEPNCMSTRYAVA-VSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEP 368
C EKA ++P +A A VSR R E L A + A V++ P
Sbjct: 80 DCWEKALSIDPE-----FAPAWVSRGMLHRRRNRLEEAL--ACYDRA--------VELNP 124
Query: 369 --PIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGA----GESAFLDQASAVNVAKE 422
+AW + V H + A E L+ A G + FL +A
Sbjct: 125 DSAVAWYNRSGVFVAMHRMDDAVACYERVLAIDPHFVAAWTDLGYAHFLGHRHEEAIA-- 182
Query: 423 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
C A+ DP + +W+ A Y G++R + +C +KVL +
Sbjct: 183 CYDRAVADDPGSVRVWSLKGGALYALGEYRKALECFDKVLSI 224
>gi|425448104|ref|ZP_18828084.1| TPR repeat protein (modular protein) [Microcystis aeruginosa PCC
9443]
gi|389731183|emb|CCI04721.1| TPR repeat protein (modular protein) [Microcystis aeruginosa PCC
9443]
Length = 1040
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 105/262 (40%), Gaps = 40/262 (15%)
Query: 138 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 197
SL K+L+ LE+ ++ ++ + + A W+ LG+I+ G+L +I L ++P
Sbjct: 384 SLQKQLK---LEDAIALYQQLINQYPQYAPAWHQLGVIMDSLGQLDQAILAYKQALFINP 440
Query: 198 NNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGA 257
N NLGI GD++++ CF I +QN+ A A
Sbjct: 441 NYAKSYNNLGIIAVSKGDLDEAIICFNQAIRSNQNY---------------------AFA 479
Query: 258 NTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAK 317
+ G L + A A++ +P NL N L G + + A K
Sbjct: 480 DNNLGLVLQMQDKLGDAGVKFQEAIRKNPNYPEAHFNLGNVLQLQGKTEEAIAYFQTAIK 539
Query: 318 LEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAA 377
L P +Y A + + A Q+ E S+ ++ +Q P A+A +
Sbjct: 540 LNP-----KYIKAYNSLALALGRQDKVE-------AAMSVFKQALAIQPNSPEAFACLFS 587
Query: 378 VQKTHHEVAAAFETEENELSKM 399
++ E+ +ET E +L ++
Sbjct: 588 MK----EMTCNWETREADLIQI 605
>gi|323452442|gb|EGB08316.1| putative O-linked GlcNAc transferase [Aureococcus anophagefferens]
Length = 1151
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 88/190 (46%), Gaps = 17/190 (8%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+++ +++ +++ + AV L + G L+ +I + L ++PN D NL
Sbjct: 279 KVDAAIAEYARAIELNPGFAVAHGNLASCYFEKGDLERAIRIFRVALDIEPNFPDACNNL 338
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAA------------LINYAALLLCKYGSV-LA 253
G A + GD+E++ C++ +L +H A L+N A + C +V LA
Sbjct: 339 GNALREHGDLEEAIACYRRALLLRPDHAHAHNNLGNAMKDKGLVNEA--IQCYATAVGLA 396
Query: 254 G--AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 311
A A++ G L + V+ A A+ DP+ A ++N+ NAY G + +C
Sbjct: 397 PRFAAAHSNLGLVLKERGTVDDALAHYREAIAVDPQFADAYSNMGNAYKDLGRLDDAIRC 456
Query: 312 LEKAAKLEPN 321
+A KL P+
Sbjct: 457 YGEALKLRPD 466
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 76/188 (40%), Gaps = 26/188 (13%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
L++ + +E+++ + LG +L + G++ ++I+ + + ++P GNL
Sbjct: 245 RLDDAAAYYREAIRRKPSAFDAHSNLGNVLKEQGKVDAAIAEYARAIELNPGFAVAHGNL 304
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
YF+ GD+E++ + F+ + + N P A N G L
Sbjct: 305 ASCYFEKGDLERAIRIFRVALDIEPNFPDACNNL---------------------GNALR 343
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
+ + A C AL P AH NL NA G + +C A L P R
Sbjct: 344 EHGDLEEAIACYRRALLLRPDHAHAHNNLGNAMKDKGLVNEAIQCYATAVGLAP-----R 398
Query: 327 YAVAVSRI 334
+A A S +
Sbjct: 399 FAAAHSNL 406
>gi|334131406|ref|ZP_08505170.1| Tetratricopeptide TPR_2 repeat protein [Methyloversatilis
universalis FAM5]
gi|333443573|gb|EGK71536.1| Tetratricopeptide TPR_2 repeat protein [Methyloversatilis
universalis FAM5]
Length = 568
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 78/178 (43%), Gaps = 21/178 (11%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
L+E +++++ A + + LGL+ + GRLQ ++S + LA+ + + + NL
Sbjct: 58 RLDEAEQAFAGAVKANPGSAELLSNLGLVQQQRGRLQEALSTYTRALAIRRDFPELLYNL 117
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G+ G ++++A ++ I AL N G+ LD
Sbjct: 118 GVVQDALGRLDEAATSYRRAIALQPRFAVALFNL---------------------GSVLD 156
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS 324
+ A A E A++A+P W+NL A +G+ + +C +KA ++P +
Sbjct: 157 RQGARGEAIEVYRRAVEAEPGFVEAWSNLGAALQQSGEAEQAVRCYQKALDIQPTATA 214
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 29/147 (19%)
Query: 81 LGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL---SLVQIHHAQCLLPESSGDN 137
LGL+ Q+ G+ +A+S+Y +A L D PELL +VQ +
Sbjct: 83 LGLVQQQRGRLQEALSTYTRA----LAIRRDF--PELLYNLGVVQ--------------D 122
Query: 138 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 197
+L + L+E + + ++ R AV LG +L + G +I V + +P
Sbjct: 123 ALGR------LDEAATSYRRAIALQPRFAVALFNLGSVLDRQGARGEAIEVYRRAVEAEP 176
Query: 198 NNCDCIGNLGIAYFQSGDMEQSAKCFQ 224
+ NLG A QSG+ EQ+ +C+Q
Sbjct: 177 GFVEAWSNLGAALQQSGEAEQAVRCYQ 203
>gi|410479070|ref|YP_006766707.1| hypothetical protein LFML04_1537 [Leptospirillum ferriphilum ML-04]
gi|424867786|ref|ZP_18291566.1| Putative TPR-domain containing protein [Leptospirillum sp. Group II
'C75']
gi|124514384|gb|EAY55897.1| putative TPR-domain containing protein [Leptospirillum rubarum]
gi|387221840|gb|EIJ76353.1| Putative TPR-domain containing protein [Leptospirillum sp. Group II
'C75']
gi|406774322|gb|AFS53747.1| putative TPR domain-containing protein [Leptospirillum ferriphilum
ML-04]
Length = 731
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 67 VARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILL-RCEADIA-----------R 114
+ RK P + +F +G +Y++LG P KAV KA + + + D + R
Sbjct: 370 MIRKFPGSYQGYFSMGDLYRKLGNPQKAVFYLRKAHRLAPGKWQIDFSLALTLEDWKKYR 429
Query: 115 PELLSLVQIHHAQCLLPESS-----GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVW 169
P + +L H A L P +S LD+ + L + + LKE+++ D R
Sbjct: 430 PAMAAL---HQAMVLKPGNSLLVFNRAVLLDQWNHRKYLSRVRADLKEAIRLDPRFPDAL 486
Query: 170 NTLGLI-LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 221
N LG ++++G L ++ ++ L DP N +LG YF+ GDM+++ +
Sbjct: 487 NYLGYTDVVENGNLVNARYLILRALTFDPQNPSYRDSLGWCYFKMGDMKRAFR 539
>gi|414075408|ref|YP_006994726.1| TPR repeat domain-containing protein [Anabaena sp. 90]
gi|413968824|gb|AFW92913.1| TPR repeat domain-containing protein [Anabaena sp. 90]
Length = 755
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 157/393 (39%), Gaps = 60/393 (15%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC---------------EADIARPE 116
P +A A+ +G + G+P +AV++Y KA E + + A
Sbjct: 95 PNDAEAYVGIGNVLNAQGKPDEAVAAYRKAIEFDPKYAKAYNSLGNALYDQEKLKEAVAA 154
Query: 117 LLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLIL 176
++ H + G N L E +EL+E ++ +++++ + + A +N LG L
Sbjct: 155 YRKAIEFDHKYAAAYYNLG-NVL---YEQKELDEAVAAYRKAIELNPKYATAYNNLGNAL 210
Query: 177 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 236
+L +++ + ++P + NLGIA ++++ +Q I D
Sbjct: 211 SDQKKLDEAVAAYQEAIKLNPKDATAYNNLGIALSDQKKLDEAVAAYQKAIELD------ 264
Query: 237 LINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 296
KY + G + LD+A A A++ DPK A + NL
Sbjct: 265 ---------PKYATAYYNLGNALSDQKKLDEAVA------AYQKAIELDPKYATAYYNLG 309
Query: 297 NAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMAS 356
NA + +KA +L+P +YA A + +A R Q+ ++ A +
Sbjct: 310 NALSDQKKLDEAVAAYQKAIELDP-----KYATAYYNLGNALRGQKKLDEAVAAYQKA-- 362
Query: 357 ILREGDPVQIEPPIAWA----GFA-AVQKTHHEVAAAFETEENELSKMEECAGAGESAFL 411
+++ P A A G A + QK E AA++ + EL+ + A L
Sbjct: 363 -------IELNPKYATAYNNLGIALSDQKKLDEAVAAYQ-KAIELNPKDATAYYNLGIAL 414
Query: 412 DQASAVNVAKECLLAALKADPKAAHIWANLANA 444
++ A A++ DPK A ++ NL NA
Sbjct: 415 SDQKKLDEAVAAYQKAIELDPKDAAVYNNLGNA 447
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 140/362 (38%), Gaps = 68/362 (18%)
Query: 115 PELL---SLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNT 171
P+L+ + VQ Q ES GDNS + E I K+ +Q + +N
Sbjct: 21 PQLVFAQNTVQQLFKQGETAESVGDNS--------QAETIWRKV---LQVEPNNGKAYNN 69
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
LG L + G+L +++ L ++PN+ + +G G +++ ++ I D
Sbjct: 70 LGNALRRQGKLPEALTAHQKALQLNPNDAEAYVGIGNVLNAQGKPDEAVAAYRKAIEFD- 128
Query: 232 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKA---DPKA 288
KY G A DQ KE + A KA D K
Sbjct: 129 --------------PKYAKAYNSLG-----NALYDQEK----LKEAVAAYRKAIEFDHKY 165
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLS 348
A + NL N Y + + KA +L P +YA A + + +A Q+ ++
Sbjct: 166 AAAYYNLGNVLYEQKELDEAVAAYRKAIELNP-----KYATAYNNLGNALSDQKKLDEAV 220
Query: 349 WAGNEMASILREGDPVQIEPPIAWA----GFA-AVQKTHHEVAAAFETEENELSKMEECA 403
A E +++ P A A G A + QK E AA++ K E
Sbjct: 221 AAYQEA---------IKLNPKDATAYNNLGIALSDQKKLDEAVAAYQ-------KAIELD 264
Query: 404 GAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLM 463
+A+ + +A++ K+ L A+ A KA + A AYY G+ S K L++ +
Sbjct: 265 PKYATAYYNLGNALSDQKK-LDEAVAAYQKAIELDPKYATAYYNLGNALSDQKKLDEAVA 323
Query: 464 VY 465
Y
Sbjct: 324 AY 325
>gi|302037836|ref|YP_003798158.1| hypothetical protein NIDE2523 [Candidatus Nitrospira defluvii]
gi|300605900|emb|CBK42233.1| conserved protein of unknown function, contains TPR repeats
[Candidatus Nitrospira defluvii]
Length = 567
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 74/163 (45%), Gaps = 11/163 (6%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKA-----EEILLRCEADIARPEL--LSLVQIH 124
P+N F G++ QR G+ + AV +Y +A I R A EL L+ Q
Sbjct: 88 PRNPVYWFNHGVVLQRAGRTVDAVEAYGQAIQWNPRYIEARTNLGNAYKELGRLADAQAA 147
Query: 125 HAQCLL--PE-SSGDNSLDKEL-EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSG 180
+ Q L P+ + N+L L E L+E + ++ A N LGL+LL+ G
Sbjct: 148 YEQVLTLNPDHAEAHNNLGVVLKEQGRLDEAAESYRRAIALKPSHAEAQNNLGLVLLEQG 207
Query: 181 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 223
RL +I L + P + NLGIA+ DM ++ +CF
Sbjct: 208 RLDDAIRCFERALQIVPGYGTALYNLGIAWIWREDMPRALRCF 250
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/187 (19%), Positives = 73/187 (39%), Gaps = 21/187 (11%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
L++ L L ++ + R V W G++L ++GR ++ + +P + NLG
Sbjct: 73 LKDALGWLAKACAAGPRNPVYWFNHGVVLQRAGRTVDAVEAYGQAIQWNPRYIEARTNLG 132
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 267
AY + G + + ++ ++ + +H A A+ G L +
Sbjct: 133 NAYKELGRLADAQAAYEQVLTLNPDH---------------------AEAHNNLGVVLKE 171
Query: 268 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 327
++ A E A+ P A NL G + +C E+A ++ P + Y
Sbjct: 172 QGRLDEAAESYRRAIALKPSHAEAQNNLGLVLLEQGRLDDAIRCFERALQIVPGYGTALY 231
Query: 328 AVAVSRI 334
+ ++ I
Sbjct: 232 NLGIAWI 238
>gi|118387255|ref|XP_001026739.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89308506|gb|EAS06494.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1417
Score = 55.8 bits (133), Expect = 5e-05, Method: Composition-based stats.
Identities = 58/266 (21%), Positives = 106/266 (39%), Gaps = 41/266 (15%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P + A+ LGL+Y+ KA+ Y+KA EI +C I L I+ Q L
Sbjct: 992 PNYSEAYDKLGLIYEEKKMDEKAIEYYKKAIEIDSKCFNAIN-----GLGNIYLDQKLTA 1046
Query: 132 ESSGDNSLDKELEPEEL----------------EEILSKLKESMQSDTRQAVVWNTLGLI 175
E+ EL+P+ + ++ + K++++ D R +N LGLI
Sbjct: 1047 EAIKCYMAALELDPKSVKTHYNLGISFEDERNYDQAVYHYKKAVELDPRYINAYNNLGLI 1106
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
G+L +++ L ++PN + N+G+ Y+ ME + ++ + + N+
Sbjct: 1107 YEMKGKLDDALTCYQKALEINPNYVNAHNNVGLVYYAQNKMEDALINYRKALELNPNYYQ 1166
Query: 236 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 295
AL N + Y + DQA A ++ PK + L
Sbjct: 1167 ALYNSGLIYETYYKQI--------------DQAIAF------YKRVIELSPKYFSAYIRL 1206
Query: 296 ANAYYLTGDHRSSGKCLEKAAKLEPN 321
N Y + + C ++ +++PN
Sbjct: 1207 GNIYLDSKMMDEALDCYQRILEIDPN 1232
Score = 50.4 bits (119), Expect = 0.002, Method: Composition-based stats.
Identities = 67/279 (24%), Positives = 104/279 (37%), Gaps = 48/279 (17%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
PK A++ GL+Y+ Q A+ YEKA E+ P+ +S A L
Sbjct: 550 PKYNQAYYNSGLVYELKNQKETAIEKYEKAIEL---------SPKYIS------ALIRLA 594
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+ D S + E + IL +S+ + R LG I ++
Sbjct: 595 DIYAD-SQQYQRGIECFKRILEITPDSVYDNYR-------LGYIYYCLKNFDEAMYYYKK 646
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK---- 247
L ++PN + I N+G+ Y+ + E++ KC++ I D+N+ A N L K
Sbjct: 647 ALEINPNYINAINNVGLVYYNQKNYEEALKCYEKAIEIDKNYFQAHYNSGILYEAKKMID 706
Query: 248 ---------------YGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 292
Y S L +G LD+ N A EC L+ DP
Sbjct: 707 EALDCYKKVMEINPNYFSALIRSG-----NIYLDKYMTDN-ALECFKKILEIDPNYIDAI 760
Query: 293 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 331
NL Y + C KA ++ PN + Y + V
Sbjct: 761 NNLGIVYEDKQMFDEAIDCYIKAIQINPNYVKAHYNLGV 799
Score = 47.4 bits (111), Expect = 0.015, Method: Composition-based stats.
Identities = 64/321 (19%), Positives = 119/321 (37%), Gaps = 39/321 (12%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
+ L+E + L+++++ D A + LG + + +I + +DPN+ D +
Sbjct: 91 DNLDESIKFLEKAIEIDPNYAEAYERLGWVYENQNLIDQAIDSYKKAIEIDPNHLDSHYS 150
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
LG+ Y G +++ + ++ ++ D N+ ALIN + C L
Sbjct: 151 LGVVYESQGKIDEGIEHYKKMLEIDPNNIKALINLSRNYFCD-----------------L 193
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
A+ +CL ++ +PK + L Y + + +K +L+PN S
Sbjct: 194 MHEDAI----KCLNKVIEIEPKNKVAYERLGFIYENQNKIDEAIQNYQKVIELDPNFQSV 249
Query: 326 RYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWA----GFAAVQKT 381
++ T+ + E L++G +QI P A G+ K
Sbjct: 250 YISLGFMYF---------TKNMD---EEAIECLKKG--IQINPKFVQAYERLGYVYQMKN 295
Query: 382 HHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANL 441
E A + + E+ A VN A+ C L AL+ DP + NL
Sbjct: 296 MTEEAFEYYKKAIEIDPKYFEAQFNLGLLYYNLKMVNEAEVCYLNALQIDPLDIYTHYNL 355
Query: 442 ANAYYLTGDHRSSGKCLEKVL 462
Y + C +K +
Sbjct: 356 GLVYETKKMFDKALSCYQKAI 376
Score = 45.4 bits (106), Expect = 0.062, Method: Composition-based stats.
Identities = 65/279 (23%), Positives = 117/279 (41%), Gaps = 36/279 (12%)
Query: 54 EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLR-CEADI 112
EE + LK G+ + PK A+ LG +YQ +A Y+KA EI + EA
Sbjct: 264 EEAIECLKKGI----QINPKFVQAYERLGYVYQMKNMTEEAFEYYKKAIEIDPKYFEAQF 319
Query: 113 ARPELL-SLVQIHHAQ-CLLPESSGDN-------SLDKELEPEEL-EEILSKLKESMQSD 162
L +L ++ A+ C L D +L E +++ ++ LS +++++ +
Sbjct: 320 NLGLLYYNLKMVNEAEVCYLNALQIDPLDIYTHYNLGLVYETKKMFDKALSCYQKAIELN 379
Query: 163 TRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKC 222
+ + G I L++ + +I +L +DPN D I NLGI Y + +++S +C
Sbjct: 380 PKYLNAYIRSGNIYLETKKQDDAIQCYQKILELDPNYVDAINNLGIVYEEKKMLDESMEC 439
Query: 223 FQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAAL 282
++ + D + A N G + + A E A+
Sbjct: 440 YKKALQIDPLYVKAHYNL---------------------GIVYELKKMHDQAIESYERAI 478
Query: 283 KADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
+ DPK + + L N Y S+ +KA +++PN
Sbjct: 479 EIDPKYINAYNKLGNIYLDKKILYSALNYYKKALEIDPN 517
Score = 42.7 bits (99), Expect = 0.43, Method: Composition-based stats.
Identities = 51/264 (19%), Positives = 100/264 (37%), Gaps = 32/264 (12%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI---LLRCEADIARPELLSLVQIHHAQC 128
P + +H+ LG++Y+ G+ + + Y+K EI ++ +++R L+ +C
Sbjct: 142 PNHLDSHYSLGVVYESQGKIDEGIEHYKKMLEIDPNNIKALINLSRNYFCDLMHEDAIKC 201
Query: 129 L--LPESSGDNSLDKEL------EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSG 180
L + E N + E +++E + ++ ++ D V+ +LG +
Sbjct: 202 LNKVIEIEPKNKVAYERLGFIYENQNKIDEAIQNYQKVIELDPNFQSVYISLGFMYFTKN 261
Query: 181 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 240
+ +I L + ++P LG Y E++ + ++ I D + A N
Sbjct: 262 MDEEAIECLKKGIQINPKFVQAYERLGYVYQMKNMTEEAFEYYKKAIEIDPKYFEAQFNL 321
Query: 241 AALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 300
L VN A+ C L AL+ DP + NL Y
Sbjct: 322 GLLYY---------------------NLKMVNEAEVCYLNALQIDPLDIYTHYNLGLVYE 360
Query: 301 LTGDHRSSGKCLEKAAKLEPNCMS 324
+ C +KA +L P ++
Sbjct: 361 TKKMFDKALSCYQKAIELNPKYLN 384
Score = 42.4 bits (98), Expect = 0.57, Method: Composition-based stats.
Identities = 56/243 (23%), Positives = 90/243 (37%), Gaps = 50/243 (20%)
Query: 81 LGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLD 140
+GL+Y +A+ YEKA EI + Q H+ +L E+
Sbjct: 661 VGLVYYNQKNYEEALKCYEKAIEIDK------------NYFQAHYNSGILYEAK------ 702
Query: 141 KELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNC 200
+ ++E L K+ M+ + G I L +++ +L +DPN
Sbjct: 703 -----KMIDEALDCYKKVMEINPNYFSALIRSGNIYLDKYMTDNALECFKKILEIDPNYI 757
Query: 201 DCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTG 260
D I NLGI Y +++ C+ I + N+ A N L K+
Sbjct: 758 DAINNLGIVYEDKQMFDEAIDCYIKAIQINPNYVKAHYNLGVLYENKFK----------- 806
Query: 261 EGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE---KAAK 317
D A A C L ++ DPK + N Y D + + K LE KA +
Sbjct: 807 ----FDDALA------CFLKVIEIDPKYMSAYNRAGNIYL---DRQMNEKALEFYKKALE 853
Query: 318 LEP 320
++P
Sbjct: 854 IDP 856
Score = 40.8 bits (94), Expect = 1.6, Method: Composition-based stats.
Identities = 61/267 (22%), Positives = 101/267 (37%), Gaps = 44/267 (16%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A + GL+Y+ Q A+ Y +A EI P + QI LL
Sbjct: 890 PNYFQAQYNSGLVYELKFQNELAILCYTRALEI---------NPNYTN-AQIRLENILLK 939
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+ ++ EELE LK+ + +T + LG + + + +IS L+
Sbjct: 940 DG---------IKQEELE----VLKKKAEENTNNPEDYYKLGYVYYTNFNMDEAISCLNK 986
Query: 192 LLAVDPNNCDCIGNLGIAY-----------FQSGDMEQSAKCFQDL-----ILKDQNHPA 235
+ ++PN + LG+ Y + +E +KCF + I DQ A
Sbjct: 987 AIEINPNYSEAYDKLGLIYEEKKMDEKAIEYYKKAIEIDSKCFNAINGLGNIYLDQKLTA 1046
Query: 236 ALIN-YAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWAN 294
I Y A L SV + G + + A A++ DP+ + + N
Sbjct: 1047 EAIKCYMAALELDPKSV----KTHYNLGISFEDERNYDQAVYHYKKAVELDPRYINAYNN 1102
Query: 295 LANAYYLTGDHRSSGKCLEKAAKLEPN 321
L Y + G + C +KA ++ PN
Sbjct: 1103 LGLIYEMKGKLDDALTCYQKALEINPN 1129
Score = 40.8 bits (94), Expect = 1.6, Method: Composition-based stats.
Identities = 53/271 (19%), Positives = 101/271 (37%), Gaps = 65/271 (23%)
Query: 194 AVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLA 253
A + NN D + G+ + +SG+ +++ + F ++ + NH
Sbjct: 3 AEESNNIDFLLQKGLEFQESGNFDEAVEYFNRVLNINLNH-------------------- 42
Query: 254 GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
AN G ++ ++ A EC + +P + ++A Y+ + S K LE
Sbjct: 43 -EDANYNLGFTYEKQDKLDQALECYKKVISINPSYIKAYVSIARVYFNQDNLDESIKFLE 101
Query: 314 KAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWA 373
KA +++PN YA A R+ +Q +Q + + I DP ++
Sbjct: 102 KAIEIDPN-----YAEAYERLGWVYENQNLIDQAIDSYKKAIEI----DPNHLD------ 146
Query: 374 GFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPK 433
+H+ + +E++ K++E E L+ DP
Sbjct: 147 -------SHYSLGVVYESQ----GKIDE------------------GIEHYKKMLEIDPN 177
Query: 434 AAHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
NL+ Y+ H + KCL KV+ +
Sbjct: 178 NIKALINLSRNYFCDLMHEDAIKCLNKVIEI 208
Score = 40.8 bits (94), Expect = 1.7, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 68/178 (38%), Gaps = 21/178 (11%)
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
E E L+E L + +++ + + + +G+I + +I+ +++ +DP + I
Sbjct: 1246 EKEMLDEALKCYRRAIELNPKYTKAYYNMGIIYEDQNKFDDAINCYKTIIELDPKYINAI 1305
Query: 204 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGA 263
LG Y + +++ C+Q + + N+ A N G
Sbjct: 1306 NRLGNIYLDLQNDDEALACYQKALEINPNYLYAFYNL---------------------GL 1344
Query: 264 CLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
+ + A +C + DPK + NL + + +KA K++PN
Sbjct: 1345 VYSEKKKIGKAIQCYQKVISIDPKYIDGYINLGVIFDEKKQMNKALTQYKKALKIDPN 1402
Score = 40.0 bits (92), Expect = 2.9, Method: Composition-based stats.
Identities = 35/175 (20%), Positives = 66/175 (37%), Gaps = 21/175 (12%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
++L++ L K+ + + + ++ + L SI L + +DPN +
Sbjct: 57 DKLDQALECYKKVISINPSYIKAYVSIARVYFNQDNLDESIKFLEKAIEIDPNYAEAYER 116
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
LG Y ++Q+ ++ I D NH L ++ +L G
Sbjct: 117 LGWVYENQNLIDQAIDSYKKAIEIDPNH---LDSHYSL------------------GVVY 155
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
+ ++ E L+ DP NL+ Y+ H + KCL K ++EP
Sbjct: 156 ESQGKIDEGIEHYKKMLEIDPNNIKALINLSRNYFCDLMHEDAIKCLNKVIEIEP 210
Score = 38.9 bits (89), Expect = 6.0, Method: Composition-based stats.
Identities = 85/407 (20%), Positives = 155/407 (38%), Gaps = 82/407 (20%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P AH+ LG++Y+ + A++ + K EI P+ +S
Sbjct: 788 PNYVKAHYNLGVLYENKFKFDDALACFLKVIEI---------DPKYMSAYN--------- 829
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+G+ LD+++ E+ L K++++ D +N +GLI +L ++
Sbjct: 830 -RAGNIYLDRQMN----EKALEFYKKALEIDPTYVNAYNNIGLIFYNQRKLDDALEYYDK 884
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYG-- 249
L ++PN N G+ Y E + C+ + + N+ A I +LL K G
Sbjct: 885 ALQINPNYFQAQYNSGLVYELKFQNELAILCYTRALEINPNYTNAQIRLENILL-KDGIK 943
Query: 250 ----SVL---AGAGANTGE-----GACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 297
VL A N E G ++ A CL A++ +P + + L
Sbjct: 944 QEELEVLKKKAEENTNNPEDYYKLGYVYYTNFNMDEAISCLNKAIEINPNYSEAYDKLGL 1003
Query: 298 AYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASI 357
Y + + +KA +++ C + A++ + + Q+ T + MA++
Sbjct: 1004 IYEEKKMDEKAIEYYKKAIEIDSKCFN-----AINGLGNIYLDQKLTAEA--IKCYMAAL 1056
Query: 358 LREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAV 417
E DP + KTH+ + +FE E N DQ AV
Sbjct: 1057 --ELDPKSV-------------KTHYNLGISFEDERN----------------YDQ--AV 1083
Query: 418 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
K+ A++ DP+ + + NL Y + G + C +K L +
Sbjct: 1084 YHYKK----AVELDPRYINAYNNLGLIYEMKGKLDDALTCYQKALEI 1126
>gi|145512772|ref|XP_001442298.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409633|emb|CAK74901.1| unnamed protein product [Paramecium tetraurelia]
Length = 1421
Score = 55.8 bits (133), Expect = 5e-05, Method: Composition-based stats.
Identities = 64/315 (20%), Positives = 122/315 (38%), Gaps = 58/315 (18%)
Query: 51 SSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEA 110
SS + K L + + P N A+ LGL+YQ Q L + + C
Sbjct: 1080 SSIQGNFEKAKKYLKYALKVSPNNPVANMRLGLIYQTKLQELNSA----------IECFQ 1129
Query: 111 DIARPELLSLVQIHH-AQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVW 169
+A + + ++ QC + EL+E + + +S++ + + W
Sbjct: 1130 QVAIVDPTNYKAYYYMGQCYFQKG-------------ELDEGIEYMNQSLKHNQSFGLAW 1176
Query: 170 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 229
+G I+ + + +++ + +D N+ + LG Y+ EQ+ + ++++
Sbjct: 1177 KAVGNIMYEMNQPATALRYFQKAIDLDKNDMEAKIRLGNCYYLQDQFEQAIQIYEEISHL 1236
Query: 230 DQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNV---------------- 273
DQN + C Y N E A L A+++
Sbjct: 1237 DQNEELE----QHMANCYYKK-------NDFEEAVLHYQRALSINSDKIECYYNLGDTYF 1285
Query: 274 -------AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
A EC +K DP+ + + N AN +++ D+ ++ K EKA +L+P + R
Sbjct: 1286 TMEKFEEALECFEKVVKNDPQHSAAFYNYANTFFVLEDYENAAKYFEKAIELQPQNVDWR 1345
Query: 327 YAVAVSRIKDAERSQ 341
VA IK + +Q
Sbjct: 1346 NYVAQLYIKKCDLNQ 1360
Score = 41.2 bits (95), Expect = 1.2, Method: Composition-based stats.
Identities = 76/368 (20%), Positives = 137/368 (37%), Gaps = 61/368 (16%)
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPN-NCDC 202
+P +++ + L + M D + L K G L ++I L PN N +
Sbjct: 980 DPTAIDQAVIVLHKGMIVDPLNQECTDALARAYEKKGDLDNAIK-YGKLATEQPNSNQNS 1038
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYA-----------ALLLCKYGSV 251
LG YF+ D++ +AK F L+ + HP ALI YA A KY
Sbjct: 1039 HYYLGTLYFKKKDLKSAAKSFITLLRINNKHPEALIEYATISSIQGNFEKAKKYLKYALK 1098
Query: 252 LAGAG--ANTGEGACLD-QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSS 308
++ AN G + +N A EC DP + + Y+ G+
Sbjct: 1099 VSPNNPVANMRLGLIYQTKLQELNSAIECFQQVAIVDPTNYKAYYYMGQCYFQKGELDEG 1158
Query: 309 GKCLEKAAKLEPNCMSTRYAVAVSRIKDA--ERSQEPT------EQLSWAGNEMASILRE 360
+ + ++ K + + +A + + E +Q T + + N+M + +R
Sbjct: 1159 IEYMNQSLK-----HNQSFGLAWKAVGNIMYEMNQPATALRYFQKAIDLDKNDMEAKIRL 1213
Query: 361 GDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEEC---AGAGESAFLDQASAV 417
G+ ++ F + + E++ + EE E M C E A L A+
Sbjct: 1214 GNCYYLQDQ-----FEQAIQIYEEISHLDQNEELE-QHMANCYYKKNDFEEAVLHYQRAL 1267
Query: 418 NV-----------------------AKECLLAALKADPKAAHIWANLANAYYLTGDHRSS 454
++ A EC +K DP+ + + N AN +++ D+ ++
Sbjct: 1268 SINSDKIECYYNLGDTYFTMEKFEEALECFEKVVKNDPQHSAAFYNYANTFFVLEDYENA 1327
Query: 455 GKCLEKVL 462
K EK +
Sbjct: 1328 AKYFEKAI 1335
>gi|425442300|ref|ZP_18822552.1| TPR repeat protein (modular protein) [Microcystis aeruginosa PCC
9717]
gi|389716770|emb|CCH99039.1| TPR repeat protein (modular protein) [Microcystis aeruginosa PCC
9717]
Length = 1039
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 105/262 (40%), Gaps = 40/262 (15%)
Query: 138 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 197
+L K+L+ LEE ++ ++ + + A W+ LG+I+ G++ +I L ++P
Sbjct: 383 TLQKQLK---LEEAIALYQQLINQHPQYAAAWHQLGVIMDSLGQIDQAILAYKQALLINP 439
Query: 198 NNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGA 257
N + NLGI GD++++ CF I +QN+ A A
Sbjct: 440 NYAESHNNLGIIAVSKGDLDEAIICFNQAIRSNQNY---------------------AFA 478
Query: 258 NTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAK 317
G L + A A++ +P NL N L G + + A K
Sbjct: 479 ENNLGLVLQMQDKLGDAVVNFQEAIRKNPNYPEAHFNLGNVLQLQGKIEEAIAYFQTAIK 538
Query: 318 LEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAA 377
L P +Y A + + A Q+ E S+ ++ +Q P A+A +
Sbjct: 539 LNP-----KYIKAYNSLALALGRQDKVE-------AAMSVFKQALAIQPNSPEAFACLFS 586
Query: 378 VQKTHHEVAAAFETEENELSKM 399
++ E+ +ET E +L ++
Sbjct: 587 MK----EMTCNWETREADLIQL 604
>gi|389581569|ref|ZP_10171596.1| tetratricopeptide repeat protein [Desulfobacter postgatei 2ac9]
gi|389403204|gb|EIM65426.1| tetratricopeptide repeat protein [Desulfobacter postgatei 2ac9]
Length = 334
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
+ ++ D N LG +L+++G + ++ +L + V P N D NLG+AYFQ
Sbjct: 35 RRALHVDRNHVSALNNLGFLLIETGAFEEAVLLLQRAIGVVPENEDAYNNLGLAYFQLEQ 94
Query: 216 MEQSAKCFQDLILKDQNHPAALINYAAL 243
E++ + F+ I + +H +A N L
Sbjct: 95 HERAQRAFETAIRYNPSHHSASFNLGVL 122
>gi|427728339|ref|YP_007074576.1| cytochrome c biogenesis factor [Nostoc sp. PCC 7524]
gi|427364258|gb|AFY46979.1| cytochrome c biogenesis factor [Nostoc sp. PCC 7524]
Length = 492
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 50/89 (56%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
LEE ++ +++++ + R A +N LG I + GR +I VL + +DP N NLG
Sbjct: 389 LEEAIAAYRQTIKLNPRHAHAYNNLGSIFGRQGRYNEAIQVLQQSIQLDPKNTPAYFNLG 448
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAA 236
A +++G EQ+ + F+ + + N+ +A
Sbjct: 449 RALYETGRYEQAVEYFRQALKLEPNYSSA 477
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 82/193 (42%), Gaps = 13/193 (6%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
E+ ++SKL S ++ +A ++ LG+ L + Q + + +++++D +
Sbjct: 286 EINSVVSKLPVSKGINSSEAAIYFNLGMALFYEEKWQEASTAFQNVISLDIQHTKSYFMR 345
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAA--LINYAALLLCKYGSVLAG---------- 254
G A + ++ + ++ +I + N+ A L+ Y +A
Sbjct: 346 GRANLYLKNYAEAIQDYRQVIKLEPNNDEAHYLLGYTLTRTNNLEEAIAAYRQTIKLNPR 405
Query: 255 -AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
A A G+ + N A + L +++ DPK + NL A Y TG + + +
Sbjct: 406 HAHAYNNLGSIFGRQGRYNEAIQVLQQSIQLDPKNTPAYFNLGRALYETGRYEQAVEYFR 465
Query: 314 KAAKLEPNCMSTR 326
+A KLEPN S +
Sbjct: 466 QALKLEPNYSSAQ 478
>gi|401408423|ref|XP_003883660.1| hypothetical protein NCLIV_034150 [Neospora caninum Liverpool]
gi|325118077|emb|CBZ53628.1| hypothetical protein NCLIV_034150 [Neospora caninum Liverpool]
Length = 987
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
A +WN G+ L GR+ ++ L +DP N + + N+G+A + G++ Q+ + ++
Sbjct: 183 ANLWNCKGVALRALGRVHEALECCREALRLDPRNTNALNNIGVALKERGELLQAVEHYRA 242
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 285
+ + + P +N A L T G L Q + A C AL AD
Sbjct: 243 SLAANPHQPTCRMNLAVAL--------------TDLGTKLKQEKKLQAALVCYTEALTAD 288
Query: 286 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
P A + NL + T D ++ + +A ++ P
Sbjct: 289 PTYAPCYYNLGVIHAETDDPHTALQMYREAVRINP 323
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%)
Query: 170 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 229
N LG++ +G++ ++ + V+P+ + NLG+ Y GD+E S K + ++
Sbjct: 473 NNLGVLYTCTGKIGEALQFAKRAIEVNPSYAEAYNNLGVLYRDQGDIEDSVKAYDKCLVL 532
Query: 230 DQNHPAALIN 239
D N P A N
Sbjct: 533 DPNSPNAFHN 542
>gi|88602204|ref|YP_502382.1| hypothetical protein Mhun_0913 [Methanospirillum hungatei JF-1]
gi|88187666|gb|ABD40663.1| TPR repeat [Methanospirillum hungatei JF-1]
Length = 280
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 72/180 (40%), Gaps = 21/180 (11%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+ E+ L L+ + ++ W+T G L+++G L +ISVL+ L +D N D NL
Sbjct: 111 DYEKALEALETATRTGPDNKYAWSTKGYSLIRTGALTEAISVLNKALELDANFSDAWNNL 170
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G AY + +++ + D + A N+ +L TG
Sbjct: 171 GWAYAEDKRYDEAVEALSKATSLDPENGYAWNNFGRILYL------------TGR----- 213
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
A++ L A + P+ W NL N Y + S + KA +L P+ R
Sbjct: 214 ----TEEARDALYNATQTKPEFDQGWYNLGNVLYAMKSYNESIEAYRKAVQLNPDNQIAR 269
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 81/186 (43%), Gaps = 13/186 (6%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
+E L+ L+E ++S++ WN++G L GR + +I L + ++PN+ N+G
Sbjct: 44 FKEGLAILEEYVKSNSTNPEAWNSIGYALNNLGRFRDAIPPLENATRLEPNHTIAWTNMG 103
Query: 208 IAYFQSGDMEQSAKCFQDLILK--DQNHPAALINYAAL---LLCKYGSVLAGA---GANT 259
AY + GD E++ + + D + + Y+ + L + SVL A AN
Sbjct: 104 WAYNELGDYEKALEALETATRTGPDNKYAWSTKGYSLIRTGALTEAISVLNKALELDANF 163
Query: 260 GE-----GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 314
+ G + + A E L A DP+ + W N YLTG + L
Sbjct: 164 SDAWNNLGWAYAEDKRYDEAVEALSKATSLDPENGYAWNNFGRILYLTGRTEEARDALYN 223
Query: 315 AAKLEP 320
A + +P
Sbjct: 224 ATQTKP 229
>gi|392413349|ref|YP_006449956.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
gi|390626485|gb|AFM27692.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
Length = 644
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 21/171 (12%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
+++++ A + N LG L ++G + ++ L + ++P D N G+ +F+ G+
Sbjct: 485 QQALEIQPNFATLHNNLGFALHEAGETELALEHLHKAMELNPQMPDAFNNAGLVFFRLGN 544
Query: 216 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 275
+++ F I + HP + YA L G+ L QA+ + A
Sbjct: 545 TQKAIDYFTRAI---ELHPGFVPAYANL------------------GSALIQANRIPDAI 583
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
L AL+ DP +A NL AYY +GD + + K ++EP R
Sbjct: 584 RILSKALQLDPYSAQTHNNLGFAYYRSGDSPKAVEHFRKTLEIEPGFQEAR 634
>gi|285803495|pdb|3KD7|A Chain A, Designed Tpr Module (Ctpr390) In Complex With Its
Peptide-Ligand (Hsp90 Peptide)
gi|285803496|pdb|3KD7|B Chain B, Designed Tpr Module (Ctpr390) In Complex With Its
Peptide-Ligand (Hsp90 Peptide)
gi|285803497|pdb|3KD7|C Chain C, Designed Tpr Module (Ctpr390) In Complex With Its
Peptide-Ligand (Hsp90 Peptide)
gi|285803498|pdb|3KD7|D Chain D, Designed Tpr Module (Ctpr390) In Complex With Its
Peptide-Ligand (Hsp90 Peptide)
gi|285803499|pdb|3KD7|E Chain E, Designed Tpr Module (Ctpr390) In Complex With Its
Peptide-Ligand (Hsp90 Peptide)
Length = 125
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 54/161 (33%), Gaps = 55/161 (34%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
A W LG K G Q +I L +DPNN NLG AY++ GD +Q
Sbjct: 9 AEAWKNLGNAYYKQGDYQKAIEYYQKALELDPNNASAWYNLGNAYYKQGD-------YQK 61
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 285
I E AL+ D
Sbjct: 62 AI------------------------------------------------EYYQKALELD 73
Query: 286 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
P A W NAYY GD++ + + +KA +L+PN +
Sbjct: 74 PNNAKAWYRRGNAYYKQGDYQKAIEDYQKALELDPNNAKAK 114
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+ ++ + +++++ D A W LG K G Q +I L +DPNN
Sbjct: 24 DYQKAIEYYQKALELDPNNASAWYNLGNAYYKQGDYQKAIEYYQKALELDPNNAKAWYRR 83
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 239
G AY++ GD +++ + +Q + D N+ A N
Sbjct: 84 GNAYYKQGDYQKAIEDYQKALELDPNNAKAKQN 116
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 285 DP-KAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAE 338
DP +A W NL NAYY GD++ + + +KA +L+PN S Y + + K +
Sbjct: 4 DPGNSAEAWKNLGNAYYKQGDYQKAIEYYQKALELDPNNASAWYNLGNAYYKQGD 58
>gi|333997725|ref|YP_004530337.1| hypothetical protein TREPR_2762 [Treponema primitia ZAS-2]
gi|333739048|gb|AEF84538.1| tetratricopeptide repeat protein [Treponema primitia ZAS-2]
Length = 183
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 71/170 (41%), Gaps = 26/170 (15%)
Query: 170 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 229
N G+ L ++ R +I + L ++P N NLGIA ++GD E++ FQ +
Sbjct: 8 NDSGIALTEANRPYEAIPLFRKALIMEPENPLLWMNLGIAQQRTGDYEEALNSFQRAVFI 67
Query: 230 DQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAA 289
+ + A ++ G + ++++EC +AL D +
Sbjct: 68 NDDLTEAWVSM---------------------GLIYYEIEQFDLSEECYQSALVRDDSSP 106
Query: 290 HIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAER 339
W NL Y++ G + + C E+A + P Y A+ ++DA R
Sbjct: 107 KTWNNLGVLYFVEGSYEEARHCFEEAVSMAP-----MYYEALYNLRDACR 151
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 42/93 (45%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+ EE L+ + ++ + W ++GLI + + S S L D ++ NL
Sbjct: 53 DYEEALNSFQRAVFINDDLTEAWVSMGLIYYEIEQFDLSEECYQSALVRDDSSPKTWNNL 112
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 239
G+ YF G E++ CF++ + + AL N
Sbjct: 113 GVLYFVEGSYEEARHCFEEAVSMAPMYYEALYN 145
>gi|186681165|ref|YP_001864361.1| hypothetical protein Npun_R0666 [Nostoc punctiforme PCC 73102]
gi|186463617|gb|ACC79418.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
Length = 532
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 79/201 (39%), Gaps = 13/201 (6%)
Query: 137 NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVD 196
N D+ E ++LEE + K K ++ D N LG++L G+L +I+ L +D
Sbjct: 171 NEADRLREAKKLEEAVVKYKAALSLDPNSVYAHNALGVVLHTQGKLSEAIAAYQKALQID 230
Query: 197 PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL---------LCK 247
PN + NLG A G + ++ +Q + D N N L +
Sbjct: 231 PNYVNAHCNLGKALHTQGKLSEAMAAYQRALRLDPNDADTHCNLGIALHDQGKLSEAIAA 290
Query: 248 YGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTG 303
Y L A+ G L ++ A AL+ DP A NL Y G
Sbjct: 291 YQKALQIDPNYVNAHCNLGKALHTQGKLSEAMAAYQRALRVDPNYASAHCNLGVTLYHQG 350
Query: 304 DHRSSGKCLEKAAKLEPNCMS 324
+ +KA +++PN ++
Sbjct: 351 KLSEAIAAYQKALQIDPNYVN 371
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 107/262 (40%), Gaps = 46/262 (17%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P + +AH LG++ G+ +A+++Y+KA +I P ++ A C
Sbjct: 197 PNSVYAHNALGVVLHTQGKLSEAIAAYQKALQI---------DPNYVN------AHC--- 238
Query: 132 ESSGDNSLDKELEPE-ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
+L K L + +L E ++ + +++ D A LG+ L G+L +I+
Sbjct: 239 ------NLGKALHTQGKLSEAMAAYQRALRLDPNDADTHCNLGIALHDQGKLSEAIAAYQ 292
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 250
L +DPN + NLG A G + ++ +Q + D N+ +A C G
Sbjct: 293 KALQIDPNYVNAHCNLGKALHTQGKLSEAMAAYQRALRVDPNYASAH--------CNLGV 344
Query: 251 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGK 310
L G L +A A AL+ DP + NL A + G +
Sbjct: 345 TLYHQGK-------LSEAIA------AYQKALQIDPNYVNAHCNLGKALHTQGKLSEAMA 391
Query: 311 CLEKAAKLEPNCMSTRYAVAVS 332
++A +++PN S + V+
Sbjct: 392 AYQRALRVDPNYASAHCNLGVT 413
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 33/189 (17%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 128
R P A AH LG+ G+ +A+++Y+KA +I P ++ A C
Sbjct: 330 RVDPNYASAHCNLGVTLYHQGKLSEAIAAYQKALQI---------DPNYVN------AHC 374
Query: 129 LLPESSGDNSLDKELEPE-ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSIS 187
+L K L + +L E ++ + +++ D A LG+ L G+L +I+
Sbjct: 375 ---------NLGKALHTQGKLSEAMAAYQRALRVDPNYASAHCNLGVTLYHQGKLSEAIA 425
Query: 188 VLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK 247
L +DPN+ D NLGIA G + ++ +Q +L D N A C
Sbjct: 426 AYQRALRLDPNDADTHCNLGIALHDQGKLSEAIAAYQRALLIDPNDADA--------HCN 477
Query: 248 YGSVLAGAG 256
G L G G
Sbjct: 478 LGIALKGQG 486
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 110/285 (38%), Gaps = 38/285 (13%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 128
R P +A H LG+ G+ +A+++Y+KA +I P ++ A C
Sbjct: 262 RLDPNDADTHCNLGIALHDQGKLSEAIAAYQKALQI---------DPNYVN------AHC 306
Query: 129 LLPESSGDNSLDKELEPE-ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSIS 187
+L K L + +L E ++ + +++ D A LG+ L G+L +I+
Sbjct: 307 ---------NLGKALHTQGKLSEAMAAYQRALRVDPNYASAHCNLGVTLYHQGKLSEAIA 357
Query: 188 VLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--- 244
L +DPN + NLG A G + ++ +Q + D N+ +A N L
Sbjct: 358 AYQKALQIDPNYVNAHCNLGKALHTQGKLSEAMAAYQRALRVDPNYASAHCNLGVTLYHQ 417
Query: 245 ------LCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWAN 294
+ Y L A + G L ++ A AL DP A N
Sbjct: 418 GKLSEAIAAYQRALRLDPNDADTHCNLGIALHDQGKLSEAIAAYQRALLIDPNDADAHCN 477
Query: 295 LANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAER 339
L A G + LE A +L PN R + + R + E+
Sbjct: 478 LGIALKGQGKLEEAIAELEIAVRLNPNNTVIRNNLEIYRNEKNEK 522
>gi|442318341|ref|YP_007358362.1| hypothetical protein MYSTI_01330 [Myxococcus stipitatus DSM 14675]
gi|441485983|gb|AGC42678.1| hypothetical protein MYSTI_01330 [Myxococcus stipitatus DSM 14675]
Length = 639
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 111/287 (38%), Gaps = 32/287 (11%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIH---- 124
R P +A A + LG + L +P KAV K L+ E ++ P L +
Sbjct: 36 RASPDDADALYRLGTAFLALNKPKKAVEPLTK----LVELEPELIPPRLALARAVRLAGD 91
Query: 125 --HAQCLLPESSGDNSLDKELEPE---------ELEEILSKLKESMQSDTRQAVVWNTLG 173
A+ LL +S D L E E + +S+ +++ + A + LG
Sbjct: 92 AGKARTLLDQSIAAFPEDMSLRAERGLLARVLDETDVAISQYSIAVELAPKDAELRFNLG 151
Query: 174 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNH 233
L ++ R +I L +D NLG A + G ++ + ++ +
Sbjct: 152 EALQRANRTDDAIEAYREALKLDSKLNVARVNLGKALAEKGLNAEAKETLREATREKLGD 211
Query: 234 PAALINYAALLL---------CKYGSVLAG----AGANTGEGACLDQASAVNVAKECLLA 280
A N +LL +Y LA A A+ G L++ A E L
Sbjct: 212 AEAHYNLGVILLRENDYDGAIGEYQRALAAEPKHARAHNNLGVALNEKGDPRKATEAFLK 271
Query: 281 ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 327
A+ ADPK A NL AY+ GD+ + K EKA LEP S Y
Sbjct: 272 AISADPKYAEAHFNLGLAYFQLGDNVRATKSFEKALVLEPRRSSGPY 318
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 135/355 (38%), Gaps = 52/355 (14%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILL---RCEADIARPELLSLVQIHHAQC 128
PK A AHF LGL Y +LG ++A S+EKA ++L R + L L Q Q
Sbjct: 277 PKYAEAHFNLGLAYFQLGDNVRATKSFEKA--LVLEPRRSSGPYTQLGHLYLEQGKKKQA 334
Query: 129 L------LPESSGDNSLDKE---------LEPEELEEILSKLKESMQSDTRQAVVWNTLG 173
+ + +SS D E L + EE ++ LK ++++ + A G
Sbjct: 335 VEAFKKAIEKSSDDGRKTTEAYQGLARAYLSLGKAEEAVATLKTAVEAFPKDAAARAGYG 394
Query: 174 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNH 233
L G L +I + + + P + + L AY + ++ + +++ +D NH
Sbjct: 395 EALKAKGDLDGAIVEYEACIGLSPTVENRMA-LADAYAKKRVAAKAQPLYLEILKEDPNH 453
Query: 234 PAALINYAALLLC--------KYGSVLAGAGANTGE----GACLDQASAVNVAKECLLAA 281
A + A LL+ Y G A+T G + ++A L A
Sbjct: 454 RGAKLALADLLMAMGDYPGAETYLRPKEGEEADTAALARLGIVHSRRGRPDLAVTELEAV 513
Query: 282 LKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP-NCMSTRY----AVAVSRIKD 336
+ DP A L N Y GD + + L +EP N ++ Y + KD
Sbjct: 514 VAKDPAQIEARAELGNLYLRGGDGAKARQVLGDVLSVEPRNALALLYLGHALYQQGKTKD 573
Query: 337 AERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFET 391
AE+S + Q+ DP EP A K E ++ET
Sbjct: 574 AEKSFRASVQV--------------DPNFAEPHNALGQLLEAAKRMDEAKQSYET 614
>gi|118362609|ref|XP_001014531.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89296298|gb|EAR94286.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1163
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 128/333 (38%), Gaps = 43/333 (12%)
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD------ 225
LG I + G L +I L++D N C NLGI ++G ++++ K FQ+
Sbjct: 679 LGNIYQQKGMLDEAIKQFQKYLSIDSENDTCQMNLGICLEKTGKLDEAIKQFQNCLDLNP 738
Query: 226 ------LILKDQNHPAALINYAALLLCKYGSVLAGAGAN----TGEGACLDQASAVNVAK 275
L + D A+IN A + Y L N G CL+ ++ +N A
Sbjct: 739 KNEICYLKIGDVYRKKAMINEA---ISAYKKCLEINPKNDICCLSLGICLENSNKINEAI 795
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 335
EC L ++ +P+ + NL N Y + + + K + P S Y + ++ K
Sbjct: 796 ECYLNCIEINPQNDICYMNLGNLYQNQNELDKAIESYYKCLNVNPQLDSCYYYLGEAQYK 855
Query: 336 DA---ERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTH---------- 382
+ E + + L N A L G Q + I A + +
Sbjct: 856 KSLFDESIKSYLKCLEINPNNEACYLSLGQTYQNQGMINEAILIYEKSLNLNIKIDVCCL 915
Query: 383 -----HEVAAAFETEENELSKMEECAGAGESAFLDQASA------VNVAKECLLAALKAD 431
+E+ + + + E A + FL+ +A + A + L+ +
Sbjct: 916 NLGVCYEIKGRIDEAIKKYQQSIEINPANDVCFLNLGNAYLNKGMFDEAIQAYQKCLQLN 975
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
PK + NL N Y + G+ + KC +K +++
Sbjct: 976 PKKEACYLNLGNVYQIKGELDKAIKCYQKCIIL 1008
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 17/181 (9%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ--------- 122
PK + LG +YQ G+ KA+ Y+K I+L + DI L + Q
Sbjct: 976 PKKEACYLNLGNVYQIKGELDKAIKCYQKC--IILNPKKDICYLNLGNAYQNKGNLEESI 1033
Query: 123 IHHAQCLLPESSGDNSLDKELEPEE----LEEILSKLKESMQSDTRQAVVWNTLGLILLK 178
++ +CL D L+ + +EE + + + +Q + + + LG K
Sbjct: 1034 KNYQKCLNLNPKNDTCLENLGNAFKNKGMIEEAIKQYRFCLQLNPNKYSCYLNLGNTYQK 1093
Query: 179 SGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSA-KCFQDLILKDQNHPAAL 237
G L +I + + ++PNN NLG+ Y S DM+ A K FQ + + N+ L
Sbjct: 1094 KGMLDEAIECYNKCININPNNETSYANLGLCYL-SKDMKYDAIKQFQKCLQINPNNKTCL 1152
Query: 238 I 238
I
Sbjct: 1153 I 1153
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 100/240 (41%), Gaps = 39/240 (16%)
Query: 7 VAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLKTGLVH 66
+ + + I + KC R++ K D+ L F + + G+ + + +K SL
Sbjct: 413 IKRIYDEAIKQFQKCL-RLNRKYDACL-FNLGISYKKKGMLNKAIKQYKKCLSLN----- 465
Query: 67 VARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLR---CEADIAR----PELLS 119
PK H+ LG+ Y++ G +A+ S++ ++ + C +I +LL
Sbjct: 466 -----PKYDACHYNLGIAYKKKGMVDEALKSFQDCIDLNPKYGACYYNIGNIYLMKDLLE 520
Query: 120 LVQIHHAQCLLPESSGDNSLDKELE------------PEELEEILSKLKESMQSDTRQAV 167
+ +CL +LD E +EE ++ ++ + + +
Sbjct: 521 EAIAQYQKCL--------TLDPNYEACFFNLGVIYKKKCMIEEAVNLFEKCLSLNQKYYA 572
Query: 168 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
+ LGLI + G + +I + L ++PN C +LG+AY G + + K FQ+ I
Sbjct: 573 CYYNLGLIQNEKGIIDEAIKLFLKCLDINPNFDACYYSLGVAYKNKGMLNDAIKQFQNCI 632
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 98/278 (35%), Gaps = 53/278 (19%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P N + LG YQ G +A+ YEK+ + L + D+ L +I
Sbjct: 874 PNNEACYLSLGQTYQNQGMINEAILIYEKS--LNLNIKIDVCCLNLGVCYEIKG------ 925
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
++E + K ++S++ + V + LG L G +I
Sbjct: 926 ---------------RIDEAIKKYQQSIEINPANDVCFLNLGNAYLNKGMFDEAIQAYQK 970
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 251
L ++P C NLG Y G+++++ KC+Q I+ + P I Y L G+
Sbjct: 971 CLQLNPKKEACYLNLGNVYQIKGELDKAIKCYQKCIILN---PKKDICYLNL-----GNA 1022
Query: 252 LAGAG--------------ANTGEGACLDQASAVNVAKECLLAALKA-------DPKAAH 290
G N CL+ K + A+K +P
Sbjct: 1023 YQNKGNLEESIKNYQKCLNLNPKNDTCLENLGNAFKNKGMIEEAIKQYRFCLQLNPNKYS 1082
Query: 291 IWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 328
+ NL N Y G + +C K + PN T YA
Sbjct: 1083 CYLNLGNTYQKKGMLDEAIECYNKCININPN-NETSYA 1119
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 103/269 (38%), Gaps = 50/269 (18%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLS----LVQIHHAQ 127
P+N + LG +YQ + KA+ SY K + P+L S L + + +
Sbjct: 806 PQNDICYMNLGNLYQNQNELDKAIESYYKCLNV---------NPQLDSCYYYLGEAQYKK 856
Query: 128 CLLPESSGDNSLDKELEPEE----------------LEEILSKLKESMQSDTRQAVVWNT 171
L ES E+ P + E + ++S+ + + V
Sbjct: 857 SLFDESIKSYLKCLEINPNNEACYLSLGQTYQNQGMINEAILIYEKSLNLNIKIDVCCLN 916
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
LG+ GR+ +I + ++P N C NLG AY G +++ + +Q + +
Sbjct: 917 LGVCYEIKGRIDEAIKKYQQSIEINPANDVCFLNLGNAYLNKGMFDEAIQAYQKCLQLNP 976
Query: 232 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 291
A +N G+V G LD+ A+ ++C++ +PK
Sbjct: 977 KKEACYLN--------LGNVYQIKGE-------LDK--AIKCYQKCII----LNPKKDIC 1015
Query: 292 WANLANAYYLTGDHRSSGKCLEKAAKLEP 320
+ NL NAY G+ S K +K L P
Sbjct: 1016 YLNLGNAYQNKGNLEESIKNYQKCLNLNP 1044
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 10/185 (5%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E + + ++ ++ + + LG+ K G L +I L+++P C NLGI
Sbjct: 418 DEAIKQFQKCLRLNRKYDACLFNLGISYKKKGMLNKAIKQYKKCLSLNPKYDACHYNLGI 477
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD-- 266
AY + G ++++ K FQD I + + A N + L K +L A A + LD
Sbjct: 478 AYKKKGMVDEALKSFQDCIDLNPKYGACYYNIGNIYLMK--DLLEEAIAQYQKCLTLDPN 535
Query: 267 -QASAVNVA----KECLL-AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
+A N+ K+C++ A+ K + YY G ++ +++A KL
Sbjct: 536 YEACFFNLGVIYKKKCMIEEAVNLFEKCLSLNQKYYACYYNLGLIQNEKGIIDEAIKLFL 595
Query: 321 NCMST 325
C+
Sbjct: 596 KCLDI 600
>gi|75910999|ref|YP_325295.1| hypothetical protein Ava_4803 [Anabaena variabilis ATCC 29413]
gi|75704724|gb|ABA24400.1| Tetratricopeptide TPR_3 [Anabaena variabilis ATCC 29413]
Length = 340
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 21/164 (12%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
++ ++++ D R+ + LGL+L + G LQ +I+ + ++P+ + NL IA
Sbjct: 109 ITAYRQALVIDPRRVEAYYNLGLVLYEQGLLQEAIAAYQDAINLEPSKVNAHHNLAIALQ 168
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 271
Q+G ME++ +++++ D + AA N GS++A G A Q
Sbjct: 169 QTGKMEEAIVAYREVLKLDPQNAAAYSN--------LGSLMAMQGRPEEAIAAYTQ---- 216
Query: 272 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 315
A++ DPK A + NL Y GD + + ++A
Sbjct: 217 ---------AVRQDPKNALAYYNLGITLYNQGDLQKASNAFKRA 251
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P+ A++ LGL+ G +A+++Y+ A + E S V HH +
Sbjct: 120 PRRVEAYYNLGLVLYEQGLLQEAIAAYQDA----INLEP--------SKVNAHHNLAIAL 167
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+ +G ++EE + +E ++ D + A ++ LG ++ GR + +I+ +
Sbjct: 168 QQTG-----------KMEEAIVAYREVLKLDPQNAAAYSNLGSLMAMQGRPEEAIAAYTQ 216
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 224
+ DP N NLGI + GD+++++ F+
Sbjct: 217 AVRQDPKNALAYYNLGITLYNQGDLQKASNAFK 249
>gi|410670059|ref|YP_006922430.1| TPR repeat-containing protein [Methanolobus psychrophilus R15]
gi|409169187|gb|AFV23062.1| TPR repeat-containing protein [Methanolobus psychrophilus R15]
Length = 215
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 25/196 (12%)
Query: 131 PESSGDNSLDKELEPEELEEILSKLKES------MQSDTRQAVVWNTLGLILLKSGRLQS 184
PE + D E EPEE E + E + SD A++WN G+ G +
Sbjct: 6 PEEWFKLAFDAE-EPEEKIEYFDLILECETRDPVLWSDEALALIWNNKGIAYTFMGMYEE 64
Query: 185 SISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
S+ L + ++ + N+G+A F E+S +C+ ++ D + A IN
Sbjct: 65 SMECFERSLKYNKSDTEVWYNMGVALFNLRRFEESIRCYNRILALDSRNDNAWIN----- 119
Query: 245 LCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGD 304
G VLA G + C + V K+ ++ D K A +W AY G
Sbjct: 120 ---KGDVLAYTGRHREAIECYSK-----VHKD-----IELDCKFAIVWNKKGLAYLDLGL 166
Query: 305 HRSSGKCLEKAAKLEP 320
+ ++ +C K ++P
Sbjct: 167 YENAAECFSKVLSIDP 182
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E SK+ + ++ D + A+VWN GL L G +++ S +L++DP + D I N+ +A
Sbjct: 135 ECYSKVHKDIELDCKFAIVWNKKGLAYLDLGLYENAAECFSKVLSIDPEHADAIENMRLA 194
>gi|171057178|ref|YP_001789527.1| hypothetical protein Lcho_0487 [Leptothrix cholodnii SP-6]
gi|170774623|gb|ACB32762.1| Tetratricopeptide TPR_2 repeat protein [Leptothrix cholodnii SP-6]
Length = 566
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 13/199 (6%)
Query: 140 DKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNN 199
D L+ +E S ++++Q A LGL+LL+ GRL+ + L + V+P+N
Sbjct: 3 DWLLQAGRHDEAESAYRKALQIKPLHARAQEGLGLVLLRIGRLEEAFLHLEAAHKVEPDN 62
Query: 200 CDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL------------LLCK 247
+ + + G+ + G++ +A F I +D +P A N + LL K
Sbjct: 63 AEILTHWGLVDLEMGNLGNAAGKFHRAIERDPRNPHAWHNLGLVALKQGQVDTSIELLRK 122
Query: 248 YGSVLAGAG-ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHR 306
+ G A + L +A ++ A + A + A +W LA+ GD
Sbjct: 123 AIEIRPQHGLAYSNLAMALRRAERLDDALDAARKATEYKADNARVWVVLADVQMNLGDFD 182
Query: 307 SSGKCLEKAAKLEPNCMST 325
++G+ LE+A ++P + T
Sbjct: 183 AAGQSLERATAIDPQHVGT 201
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 88/234 (37%), Gaps = 30/234 (12%)
Query: 142 ELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCD 201
+LE L K +++ D R W+ LGL+ LK G++ +SI +L + + P +
Sbjct: 73 DLEMGNLGNAAGKFHRAIERDPRNPHAWHNLGLVALKQGQVDTSIELLRKAIEIRPQHGL 132
Query: 202 CIGNLGIAYFQSGDMEQSAKCFQDLI-LKDQNHPAALINYAALLLCKYGSVLAGAGANTG 260
NL +A ++ ++ + + K N + VLA N G
Sbjct: 133 AYSNLAMALRRAERLDDALDAARKATEYKADN-------------ARVWVVLADVQMNLG 179
Query: 261 EGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
+ + A + L A DP+ + L + TGD S + +A +L P
Sbjct: 180 D---------FDAAGQSLERATAIDPQHVGTFVGLGKRHAATGDPTRSREAYTRALQLNP 230
Query: 321 NCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAG 374
+ R + + + S +W E A EG PV+ P W G
Sbjct: 231 DSADARGGLGELELLLGQWST------AWDLYE-ARRRVEGTPVRPYPFKPWQG 277
>gi|118376183|ref|XP_001021274.1| SLEI family protein [Tetrahymena thermophila]
gi|89303041|gb|EAS01029.1| SLEI family protein [Tetrahymena thermophila SB210]
Length = 2889
Score = 55.1 bits (131), Expect = 8e-05, Method: Composition-based stats.
Identities = 44/147 (29%), Positives = 63/147 (42%), Gaps = 21/147 (14%)
Query: 175 ILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP 234
I L+ L +IS L +L +DP N + LG Y ++Q+ KC++ I D N
Sbjct: 86 IYLEQKILDFAISCLKKVLEIDPYNANAHERLGFTYKAQNLIDQAIKCYKKAIEIDPNCT 145
Query: 235 AALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWAN 294
A N G V G G + A +C L A DPK + +
Sbjct: 146 EAYHN--------LGIVYEGKG-------------LIQQAYQCYLKAQSIDPKYTKSYIS 184
Query: 295 LANAYYLTGDHRSSGKCLEKAAKLEPN 321
LA YYL + + K L+KA ++EPN
Sbjct: 185 LARNYYLDFQIQDAIKSLKKAIEIEPN 211
Score = 45.8 bits (107), Expect = 0.046, Method: Composition-based stats.
Identities = 81/433 (18%), Positives = 171/433 (39%), Gaps = 71/433 (16%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A+ LG +YQ +A+ +Y+KA ++ + I ++V+I+H + +L
Sbjct: 2196 PNFYEAYGKLGFIYQSKKMFDEAIENYKKAIQLSPKSLESIR-----NIVEIYHNRNMLN 2250
Query: 132 E-SSGDNSLDKELE-----------PEELEEILSKLKESMQSDTRQAVVWNTLGLILLKS 179
E NS+ K E ++E + ++++Q + + + LG L
Sbjct: 2251 EVKEFFNSIPKNTETYYNIGNVFADKYMIDEAIDYYQKTIQLNPQHINAYIELGNTYLNK 2310
Query: 180 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 239
+ + ++ + ++ ++P N+G+ +F+ +++ + + + D N+ + N
Sbjct: 2311 IQYEKALECYNKIVEINPKQAVAYNNIGLVHFKQNKYDEAIQFYNKALEVDPNYDLSYYN 2370
Query: 240 YAALLLCK---------YGSVLAGAGANTGEGACLDQASAVNVAKECLLAA----LKAD- 285
+ K Y VL N + L + +N K+ L LKAD
Sbjct: 2371 SGLVYETKKMNDKALECYNKVLK---INPNDKKTLTRIQKINENKDKNLEEIEIDLKADK 2427
Query: 286 -PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN---------CMSTRYAVAVSRIK 335
P++A + + Y++ S CL+KA ++EPN + Y + I+
Sbjct: 2428 IPQSAKDYFIQGSTYFIKKIKDLSIDCLKKAIEIEPNYSEAYDKLGLVYQYYQMYEDAIQ 2487
Query: 336 DAERSQEPTEQLSWAGNEMASILREGDPV----QIEPPIAWAGFAAVQKTHHEVAAAFET 391
+ +++ E + A + +I E + + I V + HH++ A++
Sbjct: 2488 NFQKAFETNPKCYDAVLSLMAIYLEKKTLFEAKEFHNQIIEKN-PDVPELHHKIGVAYQ- 2545
Query: 392 EENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDH 451
E + D+A C A++ +PK A+ + L N Y +
Sbjct: 2546 ---------------EKSMFDEAIT------CFSKAIELNPKYANAYIKLGNIYLKQIKY 2584
Query: 452 RSSGKCLEKVLMV 464
+ +C EK + +
Sbjct: 2585 EKARECYEKAIEI 2597
Score = 44.7 bits (104), Expect = 0.095, Method: Composition-based stats.
Identities = 60/265 (22%), Positives = 100/265 (37%), Gaps = 40/265 (15%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI-----------LLRCEADIARPELLS- 119
PK A+ +GL+Y G +A+ SY+KA EI L E + E +
Sbjct: 278 PKQVDAYNNIGLIYYYKGMIKEALESYKKALEIDPKYYKAYHNSALAYEKEKLIDEAIQC 337
Query: 120 ---LVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLIL 176
++I+ + GD +D L L+E + K+ +Q D + +L +
Sbjct: 338 YKKTIEINPSFLKSLTRLGDICIDNNL----LDEGIECFKKIIQLDPQSYFDHYSLADLY 393
Query: 177 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 236
K L +I+ L ++P LGI+Y + G++E++ +C++ I + N A
Sbjct: 394 YKKNMLVEAINHYKITLEINPQQLSAHLYLGISYKKQGNLEEALQCYKKAIQLNPNSQEA 453
Query: 237 LINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 296
N G V A EC AL+ +PK NL
Sbjct: 454 HFN---------------------SGIAYSHLGNVKEALECYKKALEINPKFVSALINLG 492
Query: 297 NAYYLTGDHRSSGKCLEKAAKLEPN 321
Y + + KC + +E N
Sbjct: 493 ALYTNQKIYEDAIKCYQTLLTIEEN 517
Score = 43.1 bits (100), Expect = 0.28, Method: Composition-based stats.
Identities = 69/342 (20%), Positives = 134/342 (39%), Gaps = 48/342 (14%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
L E ++ K +++ + +Q LG+ K G L+ ++ + ++PN+ + N G
Sbjct: 399 LVEAINHYKITLEINPQQLSAHLYLGISYKKQGNLEEALQCYKKAIQLNPNSQEAHFNSG 458
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK---------YGSVLAGAGAN 258
IAY G+++++ +C++ + + +ALIN AL + Y ++L N
Sbjct: 459 IAYSHLGNVKEALECYKKALEINPKFVSALINLGALYTNQKIYEDAIKCYQTLLTIEENN 518
Query: 259 ----TGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 314
G Q + + A ++ DP + N+ AY + + LE
Sbjct: 519 LDGLNNLGYIYSQKNMFDEAINYFKKVIEIDPTYYLSYYNIGVAYE---SKQMLDEALEY 575
Query: 315 AAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMA-SILREGDPVQIEPPIAWA 373
K+E MS +Y + R + + + N+++ IL+ + E I+ A
Sbjct: 576 YNKVEE--MSPKYFIVFVRQGNVYSQKNMQNEAFQCYNKVSEQILKNIYSLSEELEISRA 633
Query: 374 GFAAVQKTHHEVAAAFETE-----------ENELSKMEECAGAGESAFLDQASAVNVAKE 422
F ++E A + + +++MEE A
Sbjct: 634 SFVQESIKNYEDAVKLNPKYIQFYHSLGLLHSNINQMEE------------------AMR 675
Query: 423 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
AA++ DPK + + L N Y + + +CLEK L +
Sbjct: 676 YFQAAIELDPKYINSYLELGNIYSGKAIYDKAQQCLEKALEI 717
Score = 42.4 bits (98), Expect = 0.56, Method: Composition-based stats.
Identities = 87/420 (20%), Positives = 155/420 (36%), Gaps = 40/420 (9%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL----SLVQIHHAQ 127
P NA+AH LG Y+ +A+ Y+KA EI C ++ L+Q + Q
Sbjct: 108 PYNANAHERLGFTYKAQNLIDQAIKCYKKAIEIDPNCTEAYHNLGIVYEGKGLIQQAY-Q 166
Query: 128 CLLPESSGDNSLDKELEPE--------ELEEILSKLKESMQSDTRQAVVWNTLGLILLKS 179
C L S D K ++++ + LK++++ + + LG +
Sbjct: 167 CYLKAQSIDPKYTKSYISLARNYYLDFQIQDAIKSLKKAIEIEPNSVEAYERLGFVYQNE 226
Query: 180 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 239
+I + +DPN + NL + Y + + S +C++ I D A N
Sbjct: 227 KNNSEAIKYYKKAIEIDPNYYNAQFNLALIYQNQNNFDDSFQCYRRAIEIDPKQVDAYNN 286
Query: 240 YAALLLCKYGSVLAGAGANTGEGACLD-------QASAVNVAKECLL-AALKADPKAAHI 291
L+ Y ++ A + + +D SA+ KE L+ A++ K I
Sbjct: 287 IG--LIYYYKGMIKEALESYKKALEIDPKYYKAYHNSALAYEKEKLIDEAIQCYKKTIEI 344
Query: 292 WANLANAYYLTGD-------HRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPT 344
+ + GD +C +K +L+P Y++A K
Sbjct: 345 NPSFLKSLTRLGDICIDNNLLDEGIECFKKIIQLDPQSYFDHYSLADLYYK--------K 396
Query: 345 EQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAG 404
L A N I E +P Q+ + + G + ++ + E A + +L+ + A
Sbjct: 397 NMLVEAINHY-KITLEINPQQLSAHL-YLGISYKKQGNLEEALQCYKKAIQLNPNSQEAH 454
Query: 405 AGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
V A EC AL+ +PK NL Y + + KC + +L +
Sbjct: 455 FNSGIAYSHLGNVKEALECYKKALEINPKFVSALINLGALYTNQKIYEDAIKCYQTLLTI 514
Score = 41.2 bits (95), Expect = 1.1, Method: Composition-based stats.
Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 23/190 (12%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
LE + L+ +S LK+ ++ D A LG + +I + +DPN +
Sbjct: 88 LEQKILDFAISCLKKVLEIDPYNANAHERLGFTYKAQNLIDQAIKCYKKAIEIDPNCTEA 147
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQN-HPAALINYAALLLCKYGSVLAGAGANTGE 261
NLGI Y G ++Q+ +C+ LK Q+ P +Y +L Y
Sbjct: 148 YHNLGIVYEGKGLIQQAYQCY----LKAQSIDPKYTKSYISLARNYY------------- 190
Query: 262 GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
LD + A + L A++ +P + + L Y ++ + K +KA +++PN
Sbjct: 191 ---LD--FQIQDAIKSLKKAIEIEPNSVEAYERLGFVYQNEKNNSEAIKYYKKAIEIDPN 245
Query: 322 CMSTRYAVAV 331
+ ++ +A+
Sbjct: 246 YYNAQFNLAL 255
Score = 39.3 bits (90), Expect = 4.2, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 70 KMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL-SLVQIHHAQC 128
++PK A ++ GL+YQ +AV SY KA E+ P+ + + +Q+
Sbjct: 1446 QVPKCAETYYEFGLVYQDQKMLDEAVESYLKAIEL---------NPKYINAFIQL----- 1491
Query: 129 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 188
G+ LDK L ++ + K+ ++ D +A+ +N +GL+ + ++
Sbjct: 1492 ------GNAYLDKLL----FDKAIESYKKIIEIDPSKAIAYNNIGLVYFEQEMNDLALEQ 1541
Query: 189 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL 237
+ ++P + N G+ Y + +++ +C++ ++ + N +L
Sbjct: 1542 FQKAIEINPKYELSLYNSGLVYERKDQNDKALECYRKVLEINPNEQKSL 1590
Score = 38.9 bits (89), Expect = 6.1, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 107/270 (39%), Gaps = 23/270 (8%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIA-------RPELLSLVQIH 124
PK A+ LGL+Y+ +A+ SY+KA EI + + I +++ +
Sbjct: 855 PKYFDAYDKLGLLYKEKKMISQAIESYKKAFEINPKYYSAIGIIMGLYKEKKMMDEAKQF 914
Query: 125 HAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTR----QAVVWNTLGLILLKSG 180
H + + + +L + E + ++ + + Q T V+ +G I L
Sbjct: 915 HKKVIEDNQNSTQALAQIGEAYQENKMFDEAIDCYQKITELEPFNVDVYIEIGNIYLDKQ 974
Query: 181 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 240
++ ++L ++P N+G+ Y++ +++ + + + +L + + ++ N
Sbjct: 975 MNDQALECFENVLQINPQEIIAHNNIGLVYYEKKMFDKALEHYNNALLINPDFQQSIYNS 1034
Query: 241 AALLLCK---------YGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 291
K Y VL N E L + +++ + L + P A
Sbjct: 1035 GLAYESKNQIDKALECYNRVLQ---LNPDEERSLTRIKKISLQNKILEKKIDKAPSTAKE 1091
Query: 292 WANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
+ Y+ S +CL+KA +L+PN
Sbjct: 1092 FYQQGYLYFQQLKDEQSIQCLKKAIELDPN 1121
>gi|113475214|ref|YP_721275.1| hypothetical protein Tery_1518 [Trichodesmium erythraeum IMS101]
gi|110166262|gb|ABG50802.1| TPR repeat [Trichodesmium erythraeum IMS101]
Length = 597
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 98/221 (44%), Gaps = 22/221 (9%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP--------NN 199
+EE ++ L++++ + V LG I G+L +IS L++DP NN
Sbjct: 141 IEEAIASLEKALTINPNYQQVNMALGDIFQTQGKLDKAISSYIKALSIDPKYSKNQNPNN 200
Query: 200 CDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK---------YGS 250
D + +LG+A ++ G++++S ++ + + + L N AA + Y +
Sbjct: 201 FDALLSLGMALYRRGNLKESQITYEQALEINPHSTECLTNIAATFYEQGRVDIAEACYQA 260
Query: 251 VL----AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHR 306
V+ A+ G L Q + A EC AALK D + + A LA + D +
Sbjct: 261 VVDLIPTSTDAHINLGFLLSQQEKYDEAIECYKAALKQDQNSVNAIAGLAEVFGKKSDWK 320
Query: 307 SSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQL 347
+ + +K KL+ N + +S +++ +S+E Q
Sbjct: 321 TVFQLYQKILKLDSNSADAYAKLGIS-LREIGKSKEAIPQF 360
>gi|304314872|ref|YP_003850019.1| tetratricopeptide repeat domain-containing protein
[Methanothermobacter marburgensis str. Marburg]
gi|302588331|gb|ADL58706.1| tetratricopeptide repeat domain-containing protein
[Methanothermobacter marburgensis str. Marburg]
Length = 406
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 74/185 (40%), Gaps = 13/185 (7%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
EE L + +Q + + WN GL+ + GR S+ L ++P + N G+
Sbjct: 203 EEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINPKLAEAWNNKGV 262
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVL-----------AGA 255
+ G E++ +C++ + D N +L L KY L A
Sbjct: 263 VLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKYEDALECFQKALEINPEFA 322
Query: 256 GANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 315
A +G L+ + +C ALK +P+ +W G H+ + KC EK+
Sbjct: 323 DAWKWKGIILEDLKEPEESLKCYKKALKLNPQNKTLWYMQGKTLQKLGKHKEALKCYEKS 382
Query: 316 AKLEP 320
K++P
Sbjct: 383 LKIDP 387
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 122/345 (35%), Gaps = 50/345 (14%)
Query: 145 PEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIG 204
PE+ E K+ ++++ + A WN GL+L + GR ++ L ++P
Sbjct: 66 PEKALECYEKI---LKNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWN 122
Query: 205 NLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGAC 264
N + + G +++ +C++ + + A N GSVL C
Sbjct: 123 NKALVLKELGRYDEALECYEKALQINPKLADAWYNK--------GSVLIYLKKYKKALKC 174
Query: 265 LDQASAVNV---------------------AKECLLAALKADPKAAHIWANLANAYYLTG 303
++A +N A +C L+ +P+ W N + G
Sbjct: 175 FEKAIELNPKNYRAWGTKGITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELG 234
Query: 304 DHRSSGKCLEKAAKLEPNCMS--TRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREG 361
+ S +C EKA ++ P V +S + E + E E+ E
Sbjct: 235 RYDESLECYEKALQINPKLAEAWNNKGVVLSELGRYEEALECYEKAL-----------EI 283
Query: 362 DPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGE--SAFLDQASAVNV 419
DP E W V + + A E + L E A A + L+
Sbjct: 284 DP---EDDKTWNNKGLVLEELGKYEDALECFQKALEINPEFADAWKWKGIILEDLKEPEE 340
Query: 420 AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
+ +C ALK +P+ +W G H+ + KC EK L +
Sbjct: 341 SLKCYKKALKLNPQNKTLWYMQGKTLQKLGKHKEALKCYEKSLKI 385
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 113/309 (36%), Gaps = 39/309 (12%)
Query: 177 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 236
LK G+ + ++ L PNN + + I + E++ +C++ ILK+ A
Sbjct: 27 LKQGKYKEALKEFRKALKARPNNPEILHYNAITLLKLKRPEKALECYEK-ILKNNPKLAE 85
Query: 237 LINYAALLLCKYGSVLAG--------------AGANTGEGACLDQASAVNVAKECLLAAL 282
N L+L + G AGA + L + + A EC AL
Sbjct: 86 AWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKALVLKELGRYDEALECYEKAL 145
Query: 283 KADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP---NCMSTRYAVAVSRIKDAER 339
+ +PK A W N + ++ + KC EKA +L P T+ + + +K E
Sbjct: 146 QINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKNYRAWGTK-GITLHNLKIYEE 204
Query: 340 SQEPTEQLSWAGNEMASILREGDPVQIEPP--IAWAGFAAVQKTHHEVAAAFETEENELS 397
+ + +++ +Q+ P AW V + E E L
Sbjct: 205 ALKCYDKV----------------LQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQ 248
Query: 398 KMEECAGA--GESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 455
+ A A + L + A EC AL+ DP+ W N G + +
Sbjct: 249 INPKLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKYEDAL 308
Query: 456 KCLEKVLMV 464
+C +K L +
Sbjct: 309 ECFQKALEI 317
>gi|94264126|ref|ZP_01287924.1| TPR repeat [delta proteobacterium MLMS-1]
gi|93455462|gb|EAT05656.1| TPR repeat [delta proteobacterium MLMS-1]
Length = 217
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Query: 133 SSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSL 192
++G + +EL PE+ ++ L+ ++++D W LG + + +I
Sbjct: 63 TAGGPEMSRELTPEQ-SRVMESLERAVEADPDNVQAWTQLGHLYFDTDHYSQAIKAYQRS 121
Query: 193 LAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 248
L ++P N D I +LG+ Y + G +++ F+ I H A N +LL +
Sbjct: 122 LQLEPENPDVITDLGVMYRRDGQPQKAIDAFEQAIAISPGHETARFNLGVVLLHDF 177
>gi|407772276|ref|ZP_11119578.1| hypothetical protein TH2_00215 [Thalassospira profundimaris WP0211]
gi|407284229|gb|EKF09745.1| hypothetical protein TH2_00215 [Thalassospira profundimaris WP0211]
Length = 629
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 31/190 (16%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
+E+ LS+ KE+M+S N GL ++S+ L +PN+ C L
Sbjct: 5 VEKALSRAKEAMKS--------NQFGL----------AVSICEEHLKAEPNSVVCWDMLA 46
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVLA-----------G 254
+F D E++ CF+ ++ P + N + K+ L
Sbjct: 47 NVHFLKKDYEKATLCFEKVVELAPKSPKSHQNLGMFYQSIGKFNEALQCFQRAVNCDTNY 106
Query: 255 AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 314
A A G G L V+ A++ AL+ DP+ A ++N A +++ G +++ + K
Sbjct: 107 ARAYNGAGNVLVNVGQVDTAQQYFAKALQLDPQFADAYSNFARVFFIKGQFQAAAQGYAK 166
Query: 315 AAKLEPNCMS 324
A L+P S
Sbjct: 167 AYSLDPEMKS 176
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+ E L + ++ DT A +N G +L+ G++ ++ + L +DP D N
Sbjct: 88 KFNEALQCFQRAVNCDTNYARAYNGAGNVLVNVGQVDTAQQYFAKALQLDPQFADAYSNF 147
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN--YAALLLCKY 248
+F G + +A+ + D +AL + Y++ ++C +
Sbjct: 148 ARVFFIKGQFQAAAQGYAKAYSLDPEMKSALASQYYSSAMMCDW 191
>gi|430744814|ref|YP_007203943.1| serine/threonine protein kinase [Singulisphaera acidiphila DSM 18658]
gi|430016534|gb|AGA28248.1| serine/threonine protein kinase [Singulisphaera acidiphila DSM 18658]
Length = 1199
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 110/263 (41%), Gaps = 36/263 (13%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A AH LG G+ +AV+ YE A ++ + + +P
Sbjct: 828 PTFAKAHMNLGNELGNQGKWAEAVACYETATQL--------------------NPKDAVP 867
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
S +L K+ ++LEE ++ LK ++ D A LG+ L K +L +++ L
Sbjct: 868 HISLGVALSKQ---DKLEEAVASLKRAISLDPNYATAHYNLGVALSKQDKLDEAVASLKR 924
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL------ 245
+A+DPN NLG AY + ++++ ++ I ++N+ +A +N L+
Sbjct: 925 TIALDPNYATAHYNLGNAYSEQRKLDEAVTSYRRAIELNRNYTSAHLNLGNELIRQGKLV 984
Query: 246 ---CKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANA 298
+ V+ A A+ G L + + A A+K DPK A + L
Sbjct: 985 DAVTSFKRVIELDSNHARAHNQLGIALRRLKRWDEAVTAHRTAIKLDPKYARAYHELGVT 1044
Query: 299 YYLTGDHRSSGKCLEKAAKLEPN 321
G+ + ++A +LEPN
Sbjct: 1045 LQAQGELGEAITSYKRAIELEPN 1067
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 107/268 (39%), Gaps = 45/268 (16%)
Query: 54 EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIA 113
+E V+SLK + P A AH+ LG Y + +AV+SY +A E+
Sbjct: 916 DEAVASLKRTIA----LDPNYATAHYNLGNAYSEQRKLDEAVTSYRRAIELNRNY----- 966
Query: 114 RPELLSLVQIHHAQCLLPESSGDNSLDKELEPE-ELEEILSKLKESMQSDTRQAVVWNTL 172
+S +L EL + +L + ++ K ++ D+ A N L
Sbjct: 967 -------------------TSAHLNLGNELIRQGKLVDAVTSFKRVIELDSNHARAHNQL 1007
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
G+ L + R +++ + + +DP LG+ G++ ++ ++ I + N
Sbjct: 1008 GIALRRLKRWDEAVTAHRTAIKLDPKYARAYHELGVTLQAQGELGEAITSYKRAIELEPN 1067
Query: 233 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 292
+ L + A LL A GE D A AV +A+ A+ P
Sbjct: 1068 NTERLADLAWLL------------ATCGEVKHRDPAGAVELAQR----AVDLSPDDDFHQ 1111
Query: 293 ANLANAYYLTGDHRSSGKCLEKAAKLEP 320
A L A+Y G+ +++ L + +L P
Sbjct: 1112 AALGVAHYRVGNWKNAVAALSRGMELRP 1139
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 107/269 (39%), Gaps = 41/269 (15%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIH-HAQCLL 130
P++A AH +LG+ + G+ +AV+SYE+A L+L H A C L
Sbjct: 692 PQSAAAHNVLGIALKVQGKFGEAVASYERA----------------LTLDPKHVPAHCNL 735
Query: 131 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
+ + ++LEE ++ + ++ D A LG L G+L ++
Sbjct: 736 GGAL--------MAQQKLEEANARFRAAIALDPNSAPAHTGLGWALCDQGKLDEAVESGR 787
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 250
+A+D + NLG A ++++ C++ I D A +N G+
Sbjct: 788 RAIALDSKSASAHYNLGRALALQKKLDEAISCYRQAIALDPTFAKAHMN--------LGN 839
Query: 251 VLAGAGANTGEGACLDQASAVN----VAKECLLAALKADPKAAHIWANLANAYYLTGD-- 304
L G AC + A+ +N V L AL K A+L A L +
Sbjct: 840 ELGNQGKWAEAVACYETATQLNPKDAVPHISLGVALSKQDKLEEAVASLKRAISLDPNYA 899
Query: 305 --HRSSGKCLEKAAKLEPNCMSTRYAVAV 331
H + G L K KL+ S + +A+
Sbjct: 900 TAHYNLGVALSKQDKLDEAVASLKRTIAL 928
>gi|340506921|gb|EGR32964.1| hypothetical protein IMG5_065320 [Ichthyophthirius multifiliis]
Length = 384
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 87/202 (43%), Gaps = 24/202 (11%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
+E EE ++ KE+++ + R + + +G I K+ Q ++ L D N+ +
Sbjct: 110 IEKEEYKKATEAFKETLKINPRFSGAFKAIGSIFYKNNSEQIALKYYQKALECDQNDIE- 168
Query: 203 IGNLGIA--YFQSGDMEQSAKCFQDLILKDQNHPA----------------ALINYAALL 244
+GIA Y+ + + + + +++++ +QN A+I+Y L
Sbjct: 169 -SKIGIANCYYLIENFDLAIQYYKEILQIEQNEEIEYNLGNCYYMKSQIDNAVIHYQNCL 227
Query: 245 LCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGD 304
+ N G C+ Q A EC L ++ DP+ + NLAN YYL D
Sbjct: 228 KINFQK--PDCLYNLGNVYCIKQDFYK--ALECFLQTIQYDPENSAALYNLANTYYLLDD 283
Query: 305 HRSSGKCLEKAAKLEPNCMSTR 326
+ + EKA K+EP + R
Sbjct: 284 YELACDYFEKAIKIEPGNVQWR 305
>gi|386813992|ref|ZP_10101216.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403489|dbj|GAB64097.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 332
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 83/195 (42%), Gaps = 23/195 (11%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
+E + K+S+ + +N +GL + G ++I ++ P+N D NLG
Sbjct: 71 FDEAIEMFKKSLAKNPNNTDAYNNIGLAYAQKGMFDNAIEAFQKVIEQKPDNVDAYYNLG 130
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 267
AYF +G +++ + F+ + +H +A S+L A + G+
Sbjct: 131 SAYFDTGRFDKAIESFKKTVQIKPDHRSAY------------SLLGIAYSKIGK------ 172
Query: 268 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 327
+ A + L ++ DP A +NL Y + G + + + KA +++P S Y
Sbjct: 173 ---YDDAIQILKKRIELDPNLAIAHSNLGIVYSMKGMDKEAMEEYTKALEIDPGHESALY 229
Query: 328 AVAV--SRIKDAERS 340
A+ + D +R+
Sbjct: 230 NTALLYDKTGDTDRA 244
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 96/249 (38%), Gaps = 40/249 (16%)
Query: 70 KMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCL 129
K P N A+ +GL Y + G A+ +++K E +P+ + A
Sbjct: 84 KNPNNTDAYNNIGLAYAQKGMFDNAIEAFQKVIE---------QKPDNVD------AYYN 128
Query: 130 LPESSGDNS-LDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 188
L + D DK +E K+++Q ++ LG+ K G+ +I +
Sbjct: 129 LGSAYFDTGRFDKAIES---------FKKTVQIKPDHRSAYSLLGIAYSKIGKYDDAIQI 179
Query: 189 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 248
L + +DPN NLGI Y G +++ + + + D H +AL N ALL K
Sbjct: 180 LKKRIELDPNLAIAHSNLGIVYSMKGMDKEAMEEYTKALEIDPGHESALYN-TALLYDKT 238
Query: 249 GSV--------------LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWAN 294
G ++ A A G + + A A+ +P A I+ +
Sbjct: 239 GDTDRAIQYYIKATEANVSNADAQYRLGKNYIKKKQYDDAINAFQIAVMTNPDNAEIYQD 298
Query: 295 LANAYYLTG 303
+ NAY G
Sbjct: 299 IGNAYKAKG 307
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 21/149 (14%)
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
GL + G +I + LA +PNN D N+G+AY Q G + + + FQ +I + +
Sbjct: 62 GLHYAQYGLFDEAIEMFKKSLAKNPNNTDAYNNIGLAYAQKGMFDNAIEAFQKVIEQKPD 121
Query: 233 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 292
+ A N L A +TG D+A E ++ P +
Sbjct: 122 NVDAYYN------------LGSAYFDTGR---FDKAI------ESFKKTVQIKPDHRSAY 160
Query: 293 ANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
+ L AY G + + + L+K +L+PN
Sbjct: 161 SLLGIAYSKIGKYDDAIQILKKRIELDPN 189
>gi|344198703|ref|YP_004783029.1| hypothetical protein Acife_0495 [Acidithiobacillus ferrivorans SS3]
gi|343774147|gb|AEM46703.1| Tetratricopeptide TPR_2 repeat-containing protein
[Acidithiobacillus ferrivorans SS3]
Length = 545
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 6/124 (4%)
Query: 121 VQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSG 180
+Q HA L+ + +L+K+ +E E IL ++++ A LG +L K G
Sbjct: 427 IQPDHADALVNLGA---TLNKQGRWDEAETIL---RQAVAIKPEHADALINLGAVLSKQG 480
Query: 181 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 240
RL + ++L +A+ P+ D + NLG+ Q G +E++ FQ + + NH AL+N
Sbjct: 481 RLDEAETILRQAIAIKPDQVDALVNLGVILRQRGCLEEAEAAFQQALTANPNHSEALVNL 540
Query: 241 AALL 244
A +
Sbjct: 541 GATI 544
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 21/116 (18%)
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
L Y Q+G ++++ + +++++++ NH A N+ G
Sbjct: 63 LATHYHQTGRLKEAEQLYRNILVEQPNH---------------------AEVNSNMGVLA 101
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
Q VN A AL +DPK WAN Y TG + + L+++ ++ N
Sbjct: 102 SQTGRVNDALYFFQTALSSDPKNGKTWANYMMLLYNTGRIQEASSALQQSLAIDKN 157
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 65/170 (38%), Gaps = 26/170 (15%)
Query: 171 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 230
LG++L GR+ +I L + P + + LG+A G M+++ + +
Sbjct: 300 NLGVMLSDQGRMDEAIGTFRKALIIKPGYREALMRLGVALGYQGRMDEAESTLRKALAIK 359
Query: 231 QNHPAALINYAALL-----------LCK--------YGSVLAGAGAN-TGEGACLDQASA 270
++P A++N +L L + Y L GA + +G CLD+A
Sbjct: 360 SDYPEAIMNLGVILGHEGRWEETETLLRQALAIKPDYPEALMNLGAALSKQGRCLDEAET 419
Query: 271 VNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
+ L AL P A NL G + L +A ++P
Sbjct: 420 I------LRQALAIQPDHADALVNLGATLNKQGRWDEAETILRQAVAIKP 463
>gi|282164146|ref|YP_003356531.1| hypothetical protein MCP_1476 [Methanocella paludicola SANAE]
gi|282156460|dbj|BAI61548.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 348
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 138/342 (40%), Gaps = 47/342 (13%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
+EE + KL++ +++D LGL G+ Q +I L + + + P N + +LG
Sbjct: 7 VEESIGKLQKMVEADPNNQEARMMLGLAYGTRGQYQEAIKELEAAVKMKPENPEAHFDLG 66
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK---------YGSVLA----G 254
+AY D++ + K + + + +H A++N A L + ++A
Sbjct: 67 LAYNMMDDLDNAVKEYNETLRLKPDHLDAMLNLANAYLAMGNADDALGLFKDMIAKNPES 126
Query: 255 AGANTGEGACLDQASAVNVAKECLLAALKADPKA--AHIWANLANAYYLTGDHRSSGKCL 312
A G L A ++ A+E L A+ DP++ H++ LA Y G+ + K
Sbjct: 127 AEVFASFGVALASAGYLDDAEEMLKKAIAKDPRSFDGHLF--LAGVYMDKGEVDDAIKEY 184
Query: 313 EKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAW 372
AA + P S Y + LS G M +I + V ++P
Sbjct: 185 RIAATISPEEPSVFYNWGFA--------------LSEKGLTMDAIEKYQIAVHLDP---- 226
Query: 373 AGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNV---AKECLLAAL- 428
GF + + A + +++++E A S F D + + V AKE AA+
Sbjct: 227 -GFVEARYNLASMLAKQNRLDEAITELKETIKADPS-FADAHNMLGVIYTAKEFTRAAIN 284
Query: 429 ------KADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
K DP A + NL YY + + K E+ L +
Sbjct: 285 ELEEAVKLDPDFAVAYNNLGMVYYGQEQYDEAIKVFEQALKI 326
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 119/329 (36%), Gaps = 73/329 (22%)
Query: 46 LGTSSSSREEKVSSLKTGLVHVARKM-PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI 104
LG + +R + ++K + A KM P+N AHF LGL Y + AV Y +
Sbjct: 31 LGLAYGTRGQYQEAIKE--LEAAVKMKPENPEAHFDLGLAYNMMDDLDNAVKEYNET--- 85
Query: 105 LLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTR 164
LR +P+ L + ++ A L + D++L K+ + +
Sbjct: 86 -LRL-----KPDHLDAM-LNLANAYLAMGNADDAL-------------GLFKDMIAKNPE 125
Query: 165 QAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 224
A V+ + G+ L +G L + +L +A DP + D L Y G+++ + K ++
Sbjct: 126 SAEVFASFGVALASAGYLDDAEEMLKKAIAKDPRSFDGHLFLAGVYMDKGEVDDAIKEYR 185
Query: 225 DLILKDQNHPAALINYAALL---------LCKY-----------------GSVLAGAG-- 256
P+ N+ L + KY S+LA
Sbjct: 186 IAATISPEEPSVFYNWGFALSEKGLTMDAIEKYQIAVHLDPGFVEARYNLASMLAKQNRL 245
Query: 257 ------------ANTGEGACLDQASAVNVAKECLLAAL-------KADPKAAHIWANLAN 297
A+ + + AKE AA+ K DP A + NL
Sbjct: 246 DEAITELKETIKADPSFADAHNMLGVIYTAKEFTRAAINELEEAVKLDPDFAVAYNNLGM 305
Query: 298 AYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
YY + + K E+A K++P +
Sbjct: 306 VYYGQEQYDEAIKVFEQALKIDPGYFEAQ 334
>gi|307213772|gb|EFN89108.1| Tetratricopeptide repeat protein 37 [Harpegnathos saltator]
Length = 1264
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 20/190 (10%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
+ LEE ++ L+ +++S W G I S+ + + VD NN +C+ +
Sbjct: 426 KHLEEAINILELALESSE----AWLLFGQIYWDMNDYNHSLVAFLNGIKVDRNNWECMIH 481
Query: 206 LGIAYFQ-SGDMEQSAKCFQDLILKDQNHPAA----------LINYAALLLCKYGSVLAG 254
LG Y + + D+E+S +C+Q + + N A L N A + + G
Sbjct: 482 LGRYYCECANDIERSRRCYQTALQINPNSEEAGIGLSTAYRLLKNTDANIQLLQNVTMQG 541
Query: 255 AGANTGEGAC----LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGK 310
G LD AV K L ++ADP H W +LA+AY + G H S+ K
Sbjct: 542 IGPKWAWLQLGLQHLDNGDAVEAIK-ALQHVIRADPNDNHSWESLADAYLVRGGHMSALK 600
Query: 311 CLEKAAKLEP 320
++A +L P
Sbjct: 601 SYQRALQLSP 610
>gi|206602734|gb|EDZ39215.1| putative TPR domain-containing protein [Leptospirillum sp. Group II
'5-way CG']
Length = 731
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 67 VARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILL-RCEADIA-----------R 114
+ RK P + +F +G +Y++LG P KAV KA + + + D + R
Sbjct: 370 MIRKFPGSYQGYFSMGDLYRKLGNPQKAVFYLRKAHRLAPGKWQIDFSLALTLEDWKKYR 429
Query: 115 PELLSLVQIHHAQCLLPESS-----GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVW 169
P + +L H A L P +S LD+ + L + + LKE+++ D R
Sbjct: 430 PAMAAL---HQAMVLKPGNSLLVFNRAVLLDQWNHRKYLSRVRADLKEAIRLDPRFPDAL 486
Query: 170 NTLGLI-LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 221
N LG ++++G L ++ ++ L DP N +LG YF+ GD++++ +
Sbjct: 487 NYLGYTDVVENGNLVNARYLILRALTFDPQNPSYRDSLGWCYFKMGDLKRAFR 539
>gi|159906168|ref|YP_001549830.1| hypothetical protein MmarC6_1787 [Methanococcus maripaludis C6]
gi|159887661|gb|ABX02598.1| TPR repeat-containing protein [Methanococcus maripaludis C6]
Length = 543
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/314 (19%), Positives = 113/314 (35%), Gaps = 65/314 (20%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
EE + ++++S++ + VW GL L GR + +I + + +D N+ D N G+
Sbjct: 220 EESIECYDKALKSNSGYSYVWYNKGLALYDMGRYEEAIGCYNRAIELDSNDIDSWNNKGL 279
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
A + G E++ C+ + D N+ + N +G L
Sbjct: 280 ALYDLGRYEEAIVCYDRALELDSNYSDSQYN---------------------KGLALQYL 318
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 328
+ A C L+ +P+ W N + + G + + +C +K+ +L P
Sbjct: 319 ERYDEAIVCYDKTLELNPEDTDSWCNKGISLHEVGRYEEAIECYDKSLELNP-------- 370
Query: 329 VAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAA 388
E + L GN + + R + VQ + H++ A
Sbjct: 371 -------------EDVDILYNKGNSLYDLGRYEEAVQFYNNALNINSSCSDAWHNKGLAL 417
Query: 389 FETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLT 448
++L K EE G C A++ P + W N N+ Y
Sbjct: 418 -----HDLGKYEEAIG------------------CYNRAIELGPNNSDSWNNKGNSLYDL 454
Query: 449 GDHRSSGKCLEKVL 462
G + + +C +K L
Sbjct: 455 GRYEEAIECYDKSL 468
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 92/256 (35%), Gaps = 65/256 (25%)
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G+ Y+ + + E+S +CF + + D A N +L Y S
Sbjct: 40 GLNYYDNENYEKSIECFNNALELDPYDKTAWFNKGYILYGIYRS---------------- 83
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
N A C L+ DP+A W YY +++ + +CL+KA +L+P +
Sbjct: 84 -----NEALVCFDKVLELDPEAFDAWLYKGYTYYDLDNYQKTIECLDKALELDPENLDAY 138
Query: 327 YAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVA 386
Y S ER +E E + A +++ P T+ +
Sbjct: 139 YCEGDSYYF-LERYEESLECYNRA-------------LELNP------------TYTSLL 172
Query: 387 AAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 446
T ++L + EE A C ALK DP A+ +N + Y
Sbjct: 173 VDKGTSLHKLGRYEE------------------AIICYDKALKIDPNYAYALSNKGLSLY 214
Query: 447 LTGDHRSSGKCLEKVL 462
G + S +C +K L
Sbjct: 215 DLGRYEESIECYDKAL 230
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 76/190 (40%), Gaps = 21/190 (11%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E +E + ++++ + W G+ L + GR + +I L ++P + D + N
Sbjct: 319 ERYDEAIVCYDKTLELNPEDTDSWCNKGISLHEVGRYEEAIECYDKSLELNPEDVDILYN 378
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
G + + G E++ + + + A IN S + A N +G L
Sbjct: 379 KGNSLYDLGRYEEAVQFYNN---------ALNIN----------SSCSDAWHN--KGLAL 417
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
A C A++ P + W N N+ Y G + + +C +K+ +L PN T
Sbjct: 418 HDLGKYEEAIGCYNRAIELGPNNSDSWNNKGNSLYDLGRYEEAIECYDKSLELNPNYSDT 477
Query: 326 RYAVAVSRIK 335
Y +S K
Sbjct: 478 WYNKGLSLCK 487
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 72/186 (38%), Gaps = 15/186 (8%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E L + ++ D W G Q +I L L +DP N D G +
Sbjct: 85 EALVCFDKVLELDPEAFDAWLYKGYTYYDLDNYQKTIECLDKALELDPENLDAYYCEGDS 144
Query: 210 YFQSGDMEQSAKCFQDLILKDQNHPAALIN----------YAALLLCKYGSVLA----GA 255
Y+ E+S +C+ + + + + L++ Y ++C Y L A
Sbjct: 145 YYFLERYEESLECYNRALELNPTYTSLLVDKGTSLHKLGRYEEAIIC-YDKALKIDPNYA 203
Query: 256 GANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 315
A + +G L + EC ALK++ +++W N A Y G + + C +A
Sbjct: 204 YALSNKGLSLYDLGRYEESIECYDKALKSNSGYSYVWYNKGLALYDMGRYEEAIGCYNRA 263
Query: 316 AKLEPN 321
+L+ N
Sbjct: 264 IELDSN 269
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
EE + ++ ++ + W+ GL L G+ + +I + + + PNN D N G
Sbjct: 390 EEAVQFYNNALNINSSCSDAWHNKGLALHDLGKYEEAIGCYNRAIELGPNNSDSWNNKGN 449
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYG 249
+ + G E++ +C+ + + N+ N L LCK G
Sbjct: 450 SLYDLGRYEEAIECYDKSLELNPNYSDTWYN-KGLSLCKLG 489
>gi|113476015|ref|YP_722076.1| hypothetical protein Tery_2383 [Trichodesmium erythraeum IMS101]
gi|110167063|gb|ABG51603.1| TPR repeat [Trichodesmium erythraeum IMS101]
Length = 1421
Score = 54.3 bits (129), Expect = 1e-04, Method: Composition-based stats.
Identities = 67/343 (19%), Positives = 141/343 (41%), Gaps = 37/343 (10%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
+E E E + ++++ D++ + ++ LG++ K+G Q +I+ + + ++PN +
Sbjct: 939 VELGEFNEAIELFSQALKVDSQDSQIYQNLGVVRFKAGDKQGAIADYNQAIKLNPNKPEA 998
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYG-SVLAGAGANTGE 261
N GIAY G + + F ++ Q HP + Y + ++ + GA A+ +
Sbjct: 999 YYNRGIAYRFLGHNQDAMNDFTKVL---QLHPRVVDAYTQRGIVRFEVKDIEGAIADFND 1055
Query: 262 GACLDQASAVNVAKECLLAALKAD---------------PKAAHIWANLANAYYLTGDHR 306
L+ + ++ L D PK + + + GDH
Sbjct: 1056 AIKLNPKHPEAIYNRAIIRRLTKDNQGSLDDLNKVIQLHPKYIDAYIKRSIVRFDLGDHE 1115
Query: 307 SSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQI 366
+ K L+ A +L+PN Y A + +RS G+ +++I + +++
Sbjct: 1116 GALKDLDSAVQLQPNNAEAYYQRA-----NTKRSM---------GDILSAIADFENAIRL 1161
Query: 367 EPPI--AWAGFAAVQKTHHEVAAAFETEENELSKMEECA-GAGESAFLD-QASAVNVAKE 422
P A+ V+ +++ A E E + A G F + + A +
Sbjct: 1162 NPKYHQAYNDMGIVRLRRGDISGAMENFEAAIQINPNYAEGHNNRGFTKFRRGDIPGAMK 1221
Query: 423 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMVY 465
AA++ +P A + NL N+ + TGD + + + + L ++
Sbjct: 1222 DFEAAIQINPNYAEAYNNLGNSRFQTGDFQGAMRDFGETLRIH 1264
>gi|410031484|ref|ZP_11281314.1| hypothetical protein MaAK2_19879 [Marinilabilia sp. AK2]
Length = 471
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 109/290 (37%), Gaps = 49/290 (16%)
Query: 75 AHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESS 134
A H+LLG +++ + +A+ Y++ + LR + A +L ++ E
Sbjct: 135 AEVHYLLGNLFRSENKTEQAIHHYKEC--VKLRINHEDALFQL----------AMITEED 182
Query: 135 GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLA 194
G EIL +E + D A W LG++ + GR + +I L
Sbjct: 183 GS-----------FHEILQFYQEFIDQDPYSAGAWYNLGVVYNRLGRYEEAIKAYDYALI 231
Query: 195 VDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-------------------LKDQNHPA 235
+D + NLG AY + + + + +Q+ I L +
Sbjct: 232 IDESFASAYFNLGNAYMNTHQFDLALEAYQNTINCEGANAENCCYLGAAYEKLDQIDMAF 291
Query: 236 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 295
+A L +Y G G C+ + A A+K + + W L
Sbjct: 292 KYFKKSAKLDPEYDDAWFGL------GMCMLKKDKYFEAIHYFKKAIKLTGENPNYWVGL 345
Query: 296 ANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTE 345
A+A Y G+ ++S + E+A LEP + T +++ D R +E +
Sbjct: 346 ADAEYHLGNLQASAEAYEEAINLEPGIIETYINLSIIYF-DQNRFEETID 394
>gi|298714766|emb|CBJ25665.1| Methyltransferase [Ectocarpus siliculosus]
Length = 738
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 89/219 (40%), Gaps = 41/219 (18%)
Query: 163 TRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKC 222
T AVV N + +L +G LQ ++ L +DP + LG AY G + +
Sbjct: 289 TVGAVVMNLMARLLHDAGNLQGAVDAYLKALELDPTRSEVFRGLGGAYQSQGQHQMAFAS 348
Query: 223 FQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGAC------------------ 264
+Q I P L+ Y L + Y + G G+ A
Sbjct: 349 YQQAI---NLAPWDLLAYLKLGML-YEDLAVGKYEEAGDHAIRCFQYYLQHSGSEDTDVL 404
Query: 265 ----------LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 314
LD SAV E AL D +++W NLANAY G+ + CL++
Sbjct: 405 TRLGNLQVMRLDPGSAV----ETYRRALAVDKSLSNVWFNLANAYLKLGEEEEAATCLKE 460
Query: 315 AAKLEPN---CMSTRYAVAVSRIKDAERSQEPTEQLSWA 350
+L+P+ +S RY +A S D R E ++QL++A
Sbjct: 461 KLRLDPDPNAGVSARYLLA-SLEADPGRLTE-SDQLAYA 497
>gi|451979886|ref|ZP_21928294.1| conserved hypothetical protein [Nitrospina gracilis 3/211]
gi|451762906|emb|CCQ89508.1| conserved hypothetical protein [Nitrospina gracilis 3/211]
Length = 504
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 84/199 (42%), Gaps = 13/199 (6%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
L+E +++++ + R W LGL+ L+ G ++ +DP + D NLG
Sbjct: 92 LKEAAEAYQKAVRINDRLDPAWFNLGLVELEWGHHPQAVDAFRRAAEIDPTDPDYPFNLG 151
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL---------LCKYGSVL----AG 254
A GD++++ + F+ + D ++ A N +L + Y L
Sbjct: 152 NALSTLGDVKEARRQFERTVFLDPSYAHAWNNLGIMLRECGEIKEAMDAYQRALDINPQF 211
Query: 255 AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 314
A A+ G + A A+KA+P+ A + NLAN YYL + + + E
Sbjct: 212 ADAHFNLGNLYEAQGNAEQALVSYQQAVKANPRFAKAYNNLANIYYLQMEMDRARETYET 271
Query: 315 AAKLEPNCMSTRYAVAVSR 333
+++P + R+ + R
Sbjct: 272 VLEIDPANHTARHMMDALR 290
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 113/302 (37%), Gaps = 59/302 (19%)
Query: 177 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 236
L + RL+ + ++L +L +D ++ D + LG+ FQ G ++ + + D A
Sbjct: 19 LNAQRLEDARNLLQQVLELDASHFDALHILGVLAFQKGSPAEAEDFIRRALAVDDGFAEA 78
Query: 237 LINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 296
N G L + + A E A++ + + W NL
Sbjct: 79 HYNL---------------------GKVLRERGRLKEAAEAYQKAVRINDRLDPAWFNLG 117
Query: 297 NAYYLTGDHRSSGKCLEKAAKLEP----------NCMSTRYAVAVSRIKDAERSQEPTEQ 346
G H + +AA+++P N +ST + +K+A R E T
Sbjct: 118 LVELEWGHHPQAVDAFRRAAEIDPTDPDYPFNLGNALST-----LGDVKEARRQFERTVF 172
Query: 347 L----SWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEEC 402
L + A N + +LRE ++ A Q+ ++ F L + E
Sbjct: 173 LDPSYAHAWNNLGIMLRECGEIK-------EAMDAYQRAL-DINPQFADAHFNLGNLYEA 224
Query: 403 AGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVL 462
G E A + AV KA+P+ A + NLAN YYL + + + E VL
Sbjct: 225 QGNAEQALVSYQQAV-----------KANPRFAKAYNNLANIYYLQMEMDRARETYETVL 273
Query: 463 MV 464
+
Sbjct: 274 EI 275
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 13/165 (7%)
Query: 75 AHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCL--LPE 132
A AH+ LG + + G+ +A +Y+KA I R + L+ L HH Q +
Sbjct: 76 AEAHYNLGKVLRERGRLKEAAEAYQKAVRINDRLDPAWFNLGLVELEWGHHPQAVDAFRR 135
Query: 133 SSGDNSLDKELEPEELEEILSKL---KESMQS-------DTRQAVVWNTLGLILLKSGRL 182
++ + D + P L LS L KE+ + D A WN LG++L + G +
Sbjct: 136 AAEIDPTDPDY-PFNLGNALSTLGDVKEARRQFERTVFLDPSYAHAWNNLGIMLRECGEI 194
Query: 183 QSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
+ ++ L ++P D NLG Y G+ EQ+ +Q +
Sbjct: 195 KEAMDAYQRALDINPQFADAHFNLGNLYEAQGNAEQALVSYQQAV 239
>gi|118364085|ref|XP_001015265.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89297032|gb|EAR95020.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1052
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/268 (19%), Positives = 112/268 (41%), Gaps = 44/268 (16%)
Query: 64 LVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQI 123
L V + P +AH+ LGL+Y++ +A++ +KA ++ + + + R L+++
Sbjct: 331 LQKVIKIKPDYIYAHYNLGLIYEQKQMMNEAINCQKKAVDLNPKHKDSLIR---LAVI-- 385
Query: 124 HHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQ 183
H Q + ++ + ++ +Q + V N LG++ +S +L
Sbjct: 386 -HTQLKM-----------------FDQAIEYYQKVIQLNPNNTDVQNNLGILFEQSNKLD 427
Query: 184 SSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL 243
+I+ + ++PN+ NLGI Y + ++++ CF+ + + +P+ L
Sbjct: 428 EAINCYMKNIKINPNDSKTYFNLGIVYEKKKSIDEAMVCFKKAL---EINPSFL------ 478
Query: 244 LLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTG 303
A G V+ A C +++ DP + + + +L YY T
Sbjct: 479 ------------QAQISLGNAYSSKKMVDEAILCFKKSIQLDPNSFNAYNSLGLIYYDTQ 526
Query: 304 DHRSSGKCLEKAAKLEPNCMSTRYAVAV 331
+ +C +KA + PN + + +
Sbjct: 527 MMDQAFECFQKALDINPNYFFAHFNLGL 554
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 70/167 (41%), Gaps = 23/167 (13%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P ++ +F LG++Y++ +A+ ++KA EI P L AQ L
Sbjct: 441 PNDSKTYFNLGIVYEKKKSIDEAMVCFKKALEI---------NPSFL------QAQISLG 485
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+ + ++E + K+S+Q D +N+LGLI + + +
Sbjct: 486 NAYSSKKM--------VDEAILCFKKSIQLDPNSFNAYNSLGLIYYDTQMMDQAFECFQK 537
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALI 238
L ++PN NLG+ Y E++ K +Q I + N AL+
Sbjct: 538 ALDINPNYFFAHFNLGLVYENRNQQEEALKHYQQAIQSNPNQANALL 584
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 111/279 (39%), Gaps = 41/279 (14%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P AHF LGL+Y+ Q +A+ Y++A + + P + A LL
Sbjct: 543 PNYFFAHFNLGLVYENRNQQEEALKHYQQAIQ---------SNP--------NQANALLK 585
Query: 132 ESS---GDNSLDKELE--PEELEEILSK----LKESMQSDTRQAVVWNTLGLILLKSGRL 182
S + + DK L+ +++I K LK++++ D + LGLI ++
Sbjct: 586 ASDLYIQNKNFDKALQCYLYYIQKIKDKAILSLKQAVKLDPNYYQAYEQLGLIQQENKMF 645
Query: 183 QSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ----DLILKDQN-HPAAL 237
+ SI ++ ++P + +L Y Q M A + D+ K +N H
Sbjct: 646 EESILYFKKVIEINPMFLNAYDSLACVY-QEMKMSNEALIYYQKALDINPKLENTHFKLG 704
Query: 238 INYAA------LLLCKYGSV---LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
I Y +LC ++ A A G +Q + ++ A +C AL+ D
Sbjct: 705 ILYQEKKMLDEAILCYQKAIEINPKNANAYNNLGIIFEQKNMIDQAFDCYTKALEIDQSY 764
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 327
N+ YY + +C + + +L+PN + Y
Sbjct: 765 VKAHNNIGLLYYDLKQMDKAHQCFKLSIELDPNYEDSHY 803
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 68/167 (40%), Gaps = 13/167 (7%)
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
G+I +L +I L ++ + P+ NLG+ Y Q M ++ C + + +
Sbjct: 315 GIIYFAQKKLDEAILELQKVIKIKPDYIYAHYNLGLIYEQKQMMNEAINCQKKAVDLNPK 374
Query: 233 HPAALINYAAL---------LLCKYGSVLAGAGANT----GEGACLDQASAVNVAKECLL 279
H +LI A + + Y V+ NT G +Q++ ++ A C +
Sbjct: 375 HKDSLIRLAVIHTQLKMFDQAIEYYQKVIQLNPNNTDVQNNLGILFEQSNKLDEAINCYM 434
Query: 280 AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
+K +P + + NL Y + C +KA ++ P+ + +
Sbjct: 435 KNIKINPNDSKTYFNLGIVYEKKKSIDEAMVCFKKALEINPSFLQAQ 481
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 117/300 (39%), Gaps = 49/300 (16%)
Query: 58 SSLKTGLVHVARKM---------------PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAE 102
+ K G+++ +KM PKNA+A+ LG+++++ +A Y KA
Sbjct: 699 THFKLGILYQEKKMLDEAILCYQKAIEINPKNANAYNNLGIIFEQKNMIDQAFDCYTKAL 758
Query: 103 EI---LLRCEADIARPELLSLVQIHHA-QCL-----LPESSGDNSLDKELEPE---ELEE 150
EI ++ +I L Q+ A QC L + D+ ++ L E + E
Sbjct: 759 EIDQSYVKAHNNIGLL-YYDLKQMDKAHQCFKLSIELDPNYEDSHYNQGLVYEFQGHITE 817
Query: 151 ILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAY 210
+ K ++Q + + ++ L I + +IS L+ ++P N D + +GI Y
Sbjct: 818 AMESYKRAIQINPKYTKAYSRLACIYSDLEMMIEAISCYLQLIELEPENIDAMNYVGIIY 877
Query: 211 FQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASA 270
Q + + FQ +L + H +L N G + LD+A +
Sbjct: 878 SQRNQPNTAIQLFQRALLINPEHINSLYN---------------LGNTYEDKEQLDEAIS 922
Query: 271 VNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
++ DP+ + N Y + + +KA ++ N + T Y +A
Sbjct: 923 Y------YQRIIQIDPQNVKAINKIGNIYIKKQMDQEALTQYKKALSIDKNFVQTYYNIA 976
>gi|297833104|ref|XP_002884434.1| hypothetical protein ARALYDRAFT_896453 [Arabidopsis lyrata subsp.
lyrata]
gi|297330274|gb|EFH60693.1| hypothetical protein ARALYDRAFT_896453 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 108/264 (40%), Gaps = 38/264 (14%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A+ LG +Y+ LG+P +A+ Y+ A ++ C ++ I++ Q
Sbjct: 254 PAFPDAYLNLGNVYKALGRPTEAIMCYQHALQMRPNCAMAFG-----NIASIYYEQ---- 304
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+L+ + K+++ D R +N LG L GR+ +I +
Sbjct: 305 --------------GQLDLAIRHYKQAISRDPRFLEAYNNLGNALKDIGRVDEAIRCYNQ 350
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALI-----NYA 241
LA+ PN+ + NLG Y + M ++ F+ + L + A+I NY+
Sbjct: 351 CLALQPNHPQAMANLGNIYMEWNMMGPASSLFKATLAVTTGLSAPFNNLAIIYKQQGNYS 410
Query: 242 ALLLCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 297
+ C Y VL A A G + V A + + A+ P A ANLA+
Sbjct: 411 DAISC-YNEVLRIDPLAADALVNRGNTYKEIGRVTEAIQDYMHAINFRPTMAEAHANLAS 469
Query: 298 AYYLTGDHRSSGKCLEKAAKLEPN 321
AY +G ++ ++A L P+
Sbjct: 470 AYKDSGHVEAAITSYKQALLLRPD 493
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 17/143 (11%)
Query: 193 LAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK----- 247
L + P +C GN+ A+ + GD +++ + + I N A N A+ + K
Sbjct: 114 LRIQPQFAECYGNMANAWKEKGDTDRAIRYYLIAIELRPNFADAWSNLASAYMRKGRFSE 173
Query: 248 ----------YGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 297
+L A +N G + ++ A C L A++ P A W+NLA
Sbjct: 174 ATQCCQQALSLNPLLVDAHSNLGN--LMKAQGLIHEAYSCYLEAVRIQPTFAIAWSNLAG 231
Query: 298 AYYLTGDHRSSGKCLEKAAKLEP 320
+ +GD + + ++A KL+P
Sbjct: 232 LFMESGDLNRALQYYKEAVKLKP 254
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 75/195 (38%), Gaps = 14/195 (7%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
+ ++Q A+ + + I + G+L +I ++ DP + NLG A G
Sbjct: 281 QHALQMRPNCAMAFGNIASIYYEQGQLDLAIRHYKQAISRDPRFLEAYNNLGNALKDIGR 340
Query: 216 MEQSAKCFQDLILKDQNHPAALINYAAL-----LLCKYGSVL-AGAGANTGEGACLD--- 266
++++ +C+ + NHP A+ N + ++ S+ A TG A +
Sbjct: 341 VDEAIRCYNQCLALQPNHPQAMANLGNIYMEWNMMGPASSLFKATLAVTTGLSAPFNNLA 400
Query: 267 ----QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
Q + A C L+ DP AA N N Y G + + A P
Sbjct: 401 IIYKQQGNYSDAISCYNEVLRIDPLAADALVNRGNTYKEIGRVTEAIQDYMHAINFRPT- 459
Query: 323 MSTRYAVAVSRIKDA 337
M+ +A S KD+
Sbjct: 460 MAEAHANLASAYKDS 474
>gi|406934936|gb|EKD69050.1| TPR Domain containing protein [uncultured bacterium]
Length = 488
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 125/315 (39%), Gaps = 63/315 (20%)
Query: 81 LGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLD 140
LG++Y++ + KA+ Y + ++ +C E+++ + + +A+ ++ + ++D
Sbjct: 171 LGVLYEKKNELKKALECYLNSYKMDGKC------TEVINNIGLVYAKL----NNYNKAID 220
Query: 141 KELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNC 200
L+ ++E + ++A+ N LGLI +G+ SIS LL VD +
Sbjct: 221 SYLKTLDIE-----------PENKKAL--NNLGLIYGLTGKFYDSISTWKKLLNVDSGDY 267
Query: 201 DCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTG 260
NLG+AY G+ + F+ + + AL+N
Sbjct: 268 STHFNLGVAYLNVGNKTNARYYFESALKINPRSAEALMN--------------------- 306
Query: 261 EGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
G+ Q + + A +K DP + NL YY+ ++KA P
Sbjct: 307 SGSLYVQEARYDEAVGEFKKVIKVDPSFYKAYYNLGTIYYMRRQFLDCEAVMKKAVSYCP 366
Query: 321 NCMSTRYAVA--VSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFA-- 376
+ ++ Y + + D E+ G EM + E P E PIA +A
Sbjct: 367 DFVNAYYYLGKLYFELDDGEK-----------GLEMFKKIVEISP---ENPIALTDYAIM 412
Query: 377 -AVQKTHHEVAAAFE 390
++QK H E F+
Sbjct: 413 LSLQKRHEEAVKLFK 427
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 61/153 (39%), Gaps = 21/153 (13%)
Query: 168 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
+ N LG++ K+ + +I + ++ + P D NLGIAY S K F D
Sbjct: 99 ILNNLGVLHAKTNNFEDAIKCWNEVIKIKPFELDAYYNLGIAY--------SEKGFVD-- 148
Query: 228 LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPK 287
AA+ Y+ ++ GS A G ++ + + A EC L + K D K
Sbjct: 149 -------AAIFMYSRVVKTGKGS----AQLYNNLGVLYEKKNELKKALECYLNSYKMDGK 197
Query: 288 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
+ N+ Y ++ + K +EP
Sbjct: 198 CTEVINNIGLVYAKLNNYNKAIDSYLKTLDIEP 230
>gi|337285534|ref|YP_004625007.1| hypothetical protein Thein_0158 [Thermodesulfatator indicus DSM
15286]
gi|335358362|gb|AEH44043.1| Tetratricopeptide repeat protein [Thermodesulfatator indicus DSM
15286]
Length = 206
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 21/170 (12%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
E+ L K ++ D V LG +L + G+L+ + L P + + + NLG+
Sbjct: 38 EDALKTFKYLLELDPPNFEVRVNLGTLLAQIGKLEEAKKHFEIALKAYPKSAEALVNLGL 97
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
F G+++++ + + + N P AL+N + + + +
Sbjct: 98 VNFHLGNLDEAQEYYLKALEVRPNWPPALVNLSTVYI---------------------EQ 136
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 318
A EC A+ +DP + + NLA AYY G + + + LEKA KL
Sbjct: 137 KKYKEAAECCEKAISSDPNFSMAYNNLAVAYYHLGKIKEAREALEKAKKL 186
>gi|325959264|ref|YP_004290730.1| hypothetical protein Metbo_1528 [Methanobacterium sp. AL-21]
gi|325330696|gb|ADZ09758.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
sp. AL-21]
Length = 329
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 97/248 (39%), Gaps = 44/248 (17%)
Query: 73 KNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPE 132
KN A GL+Y++L Q +A+ SY+KA EI + +L + L
Sbjct: 41 KNETAWIYNGLIYEKLEQYPEAIESYDKALEINPKN----------ALTWFYKGLILT-- 88
Query: 133 SSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSL 192
E+ E + S++ D++ W G++L + G Q +I + +
Sbjct: 89 -----------NLEKFSEAIESYNTSIKYDSKIIGSWINKGVLLNELGNYQEAIECQNKV 137
Query: 193 LAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVL 252
L +DP N N G+ + G ++ +CF+++I + + +L LL
Sbjct: 138 LELDPQNETAWINKGLILEELGKYSEAIECFENVIRINPKNLDSLFKKGVLL-------- 189
Query: 253 AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 312
G + A+N C L+ DPK A W N + G + K
Sbjct: 190 ---------GNLKNYQEAIN----CYNKVLERDPKNADSWNNKGATQAMLGKKDEALKSY 236
Query: 313 EKAAKLEP 320
+KA ++ P
Sbjct: 237 DKALEINP 244
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 121/316 (38%), Gaps = 35/316 (11%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E L K + ++ D++ W GLI K + +I L ++P N +
Sbjct: 26 QEALEKNDKFLEIDSKNETAWIYNGLIYEKLEQYPEAIESYDKALEINPKNA-------L 78
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
+F G + + + F + I +++ ++ KY S + G+ N +G L++
Sbjct: 79 TWFYKGLILTNLEKFSEAI---ESYNTSI---------KYDSKIIGSWIN--KGVLLNEL 124
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 328
A EC L+ DP+ W N G + + +C E ++ P + + +
Sbjct: 125 GNYQEAIECQNKVLELDPQNETAWINKGLILEELGKYSEAIECFENVIRINPKNLDSLFK 184
Query: 329 VAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAA 388
V + + + QE A N +L E DP + +W A Q + A
Sbjct: 185 KGV-LLGNLKNYQE-------AINCYNKVL-ERDPKNAD---SWNNKGATQAMLGKKDEA 232
Query: 389 FETEEN--ELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 446
++ + E++ E ++ L + E +++ DP W N A
Sbjct: 233 LKSYDKALEINPKEADTWNNKALILSNQEKYQKSIELYDISIEIDPNFNDAWHNKGVALK 292
Query: 447 LTGDHRSSGKCLEKVL 462
G H + KC +KVL
Sbjct: 293 ALGKHEEALKCFDKVL 308
>gi|224588324|gb|ACN58948.1| hypothetical protein AKSOIL_0107 [uncultured bacterium BLR7]
Length = 428
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 78/194 (40%), Gaps = 21/194 (10%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+ L+ E+++ D A + G+ G +I S + +DP + GN GI
Sbjct: 232 DRALADYDEAIRLDPNYAEAYGNRGVSFKAKGDNDRAILEYSKAIELDPKFANAFGNRGI 291
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
AY+ GD E + + + D ++P N C LA AG
Sbjct: 292 AYYDKGDYEHAIQDDDQAVKLDPDNPERYNN-----RC---YALATAG------------ 331
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 328
A +C + AL P AA +W + AY G +R S + + A +L P Y
Sbjct: 332 RAQEALADCNI-ALARSPDAAFMWDSRGYAYLRLGQYRRSIEDYDAALRLNPTHAQALYG 390
Query: 329 VAVSRIKDAERSQE 342
V+++K+ + S +
Sbjct: 391 RGVAKLKNGDASGQ 404
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 77/196 (39%), Gaps = 22/196 (11%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+ + ++ ++ D A ++ G++ +I+ + +DP
Sbjct: 162 DYDRAIADFARAIAIDPNDATSFSDRGMVFSNKKDYARAIADYDQAIKLDPKLTYAFNGR 221
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G Y GD +++ + + I D N+ A N K G N + A L+
Sbjct: 222 GTVYNALGDDDRALADYDEAIRLDPNYAEAYGNRGVSFKAK--------GDN--DRAILE 271
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
+ A+ + DPK A+ + N AYY GD+ + + ++A KL+P+ R
Sbjct: 272 YSKAIEL-----------DPKFANAFGNRGIAYYDKGDYEHAIQDDDQAVKLDPDN-PER 319
Query: 327 YAVAVSRIKDAERSQE 342
Y + A R+QE
Sbjct: 320 YNNRCYALATAGRAQE 335
>gi|118354513|ref|XP_001010518.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89292285|gb|EAR90273.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1619
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 124/299 (41%), Gaps = 43/299 (14%)
Query: 33 LEFGVDADGDQSGLGTSSSSR---EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLG 89
LE + DG LG + + + +E + S + L PKN + LG+ Y G
Sbjct: 1283 LEINLKNDGCYENLGIAYNEKGLQDEAIQSYQKCL----EINPKNDICYNNLGIAYYEKG 1338
Query: 90 QPLKAVSSYEKAEEILLRCEA-----DIARPE--LLSLVQIHHAQCLLPESSGD---NSL 139
+A+ SY+K EI + E I E L + +CL + D N+L
Sbjct: 1339 LQDEAIQSYQKCLEINPKNEGCYNNLGIVYNEKGLQDEAIQSYEKCLEINPTKDSCYNNL 1398
Query: 140 DKELEPEE-LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPN 198
+ + L+E ++ ++ ++ + + LG+ + G L +I L ++P
Sbjct: 1399 GNTYKAKGLLDEAINSYQKCLEINPKNDGCHENLGIAYNEKGLLDEAIKSYQKCLEINPK 1458
Query: 199 NCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGAN 258
N C NLGIAY++ G ++++ + +Q + + +P + Y L
Sbjct: 1459 NDVCYKNLGIAYYEIGLLDEAIQSYQKCL---EINPKNDVCYNNL--------------- 1500
Query: 259 TGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDH----RSSGKCLE 313
G ++ + A + L+ +PK + NL NAYY G H +S KCLE
Sbjct: 1501 ---GIAYNEKGLQDEAIQSYQKYLEMNPKNDVCYNNLGNAYYEKGLHDEAIQSYQKCLE 1556
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 112/309 (36%), Gaps = 53/309 (17%)
Query: 33 LEFGVDADGDQSGLGTSSSSREEKVSSLKTGLVHVARKM----PKNAHAHFLLGLMYQRL 88
LE D + LG S K+ L + RK PKN H LG+ Y
Sbjct: 433 LEINPKNDDCYNNLGNSY-----KIKGLLDKAIKSYRKCLKINPKNDICHENLGIAYNEK 487
Query: 89 GQPLKAVSSYEKAEEILLRCEADIARPE----LLSLVQIHHAQCLLPESSGDNSLDKELE 144
+A+ SY+K EI P +L + A+ LL E+
Sbjct: 488 DLQDEAIQSYQKCLEI---------NPNKDSCYYNLGNAYKAEGLLDEA----------- 527
Query: 145 PEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIG 204
+ ++ ++ + + +N LG+ + G L +I L ++P N C
Sbjct: 528 -------IQSYQKCLKINPKNNFCYNNLGIAYNEKGLLDEAIQSYQKCLEINPQNYVCYN 580
Query: 205 NLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK---------YGSVLAGA 255
NLGIAY Q G +++ + +Q I + N + N L K Y L
Sbjct: 581 NLGIAYNQKGLQDEAIQSYQKFIKINPNKDSCYQNLGNAYLAKGLQDEAIQSYQQCLEIN 640
Query: 256 GANTG----EGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 311
N G G ++ + A + L+ +P + NL NAY G + +
Sbjct: 641 PQNYGCYENLGIAYNEKGLQDEAIQSYQKYLEINPNKDSCYQNLGNAYKAKGLLNEAIQS 700
Query: 312 LEKAAKLEP 320
++ K+ P
Sbjct: 701 YQQCLKINP 709
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 105/264 (39%), Gaps = 44/264 (16%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
PKN + LG++Y G +A+ SYEK EI +L + A+ LL
Sbjct: 1355 PKNEGCYNNLGIVYNEKGLQDEAIQSYEKCLEI-----NPTKDSCYNNLGNTYKAKGLLD 1409
Query: 132 ESSGDNSLDK--ELEPEE----------------LEEILSKLKESMQSDTRQAVVWNTLG 173
E+ NS K E+ P+ L+E + ++ ++ + + V + LG
Sbjct: 1410 EAI--NSYQKCLEINPKNDGCHENLGIAYNEKGLLDEAIKSYQKCLEINPKNDVCYKNLG 1467
Query: 174 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNH 233
+ + G L +I L ++P N C NLGIAY + G +++ + +Q + + +
Sbjct: 1468 IAYYEIGLLDEAIQSYQKCLEINPKNDVCYNNLGIAYNEKGLQDEAIQSYQKYL---EMN 1524
Query: 234 PAALINYAALLLCKYGSVLAGAG---------ANTGEGACLDQASAVNVAKECLLAALKA 284
P + Y L Y L N CL+ AK L AA+K+
Sbjct: 1525 PKNDVCYNNLGNAYYEKGLHDEAIQSYQKCLEINPKNDGCLENLGVAYKAKGLLDAAIKS 1584
Query: 285 -------DPKAAHIWANLANAYYL 301
+P + NL AY++
Sbjct: 1585 YQKCLEINPDKDSCYYNLGKAYWM 1608
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 104/270 (38%), Gaps = 52/270 (19%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
PKN H LG+ Y A+ SY+K EI P + S
Sbjct: 777 PKNDCCHENLGITYNEKDLHDDAIQSYQKCLEI---------NPNIDSFYY--------- 818
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+ G+ K L L+E + ++ ++++ + +N LG+ + G +I
Sbjct: 819 -NLGNAYKAKGL----LDEAIKSYQKCLETNPKNNFCYNNLGIAYNEKGLHDEAIQSYQK 873
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 251
L ++PNN C NLGIAY Q G +++ + +Q + + +P + Y L G+
Sbjct: 874 CLEINPNNDVCYNNLGIAYNQKGLQDEAIQSYQKYL---EINPKDDVCYNNL-----GNA 925
Query: 252 LAGAG-----------------ANTG----EGACLDQASAVNVAKECLLAALKADPKAAH 290
G G N G G ++ + A + L L+ +P
Sbjct: 926 YKGKGLHDEAIQSYQKCLEINPKNDGCHENLGIAYNEKGLQDEAIQYYLQCLEINPNKDS 985
Query: 291 IWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
+ NL NAY G + + K ++ ++ P
Sbjct: 986 CYQNLGNAYKAKGLYDEAIKSYQQCLEINP 1015
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 107/271 (39%), Gaps = 32/271 (11%)
Query: 73 KNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIH-------- 124
KN + LG+ Y LG +A+ SY+K EI E D+ L + +
Sbjct: 1220 KNGGCYGNLGIAYNELGLQDEAIQSYQKYLEI--NPENDVCYNNLGNAYKTKGLLDEAIK 1277
Query: 125 -HAQCLLPESSGDNSLDK----ELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKS 179
+ +CL D + E +E + ++ ++ + + + +N LG+ +
Sbjct: 1278 SYQKCLEINLKNDGCYENLGIAYNEKGLQDEAIQSYQKCLEINPKNDICYNNLGIAYYEK 1337
Query: 180 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS----AKCFQDLILKDQNHPA 235
G +I L ++P N C NLGI Y + G +++ KC + KD +
Sbjct: 1338 GLQDEAIQSYQKCLEINPKNEGCYNNLGIVYNEKGLQDEAIQSYEKCLEINPTKDSCYNN 1397
Query: 236 ALINYAA--LL---LCKYGSVL----AGAGANTGEGACLDQASAVNVAKECLLAALKADP 286
Y A LL + Y L G + G ++ ++ A + L+ +P
Sbjct: 1398 LGNTYKAKGLLDEAINSYQKCLEINPKNDGCHENLGIAYNEKGLLDEAIKSYQKCLEINP 1457
Query: 287 KAAHIWANLANAYYLTG--DH--RSSGKCLE 313
K + NL AYY G D +S KCLE
Sbjct: 1458 KNDVCYKNLGIAYYEIGLLDEAIQSYQKCLE 1488
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 106/261 (40%), Gaps = 32/261 (12%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLR---CEADIARPE----LLSLVQIH 124
P+N + LG+ Y G +A+ SY+K EI C ++ LL+
Sbjct: 641 PQNYGCYENLGIAYNEKGLQDEAIQSYQKYLEINPNKDSCYQNLGNAYKAKGLLNEAIQS 700
Query: 125 HAQCLL--PESSG--DNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSG 180
+ QCL P++ G +N + E L+E + ++ ++ + +N LG G
Sbjct: 701 YQQCLKINPKNDGCHENLGIAQYEKGLLDEAIQSYQKCLKISPKNDSCYNNLGNAYKAKG 760
Query: 181 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 240
L +I L ++P N C NLGI Y + + + + +Q + + N + N
Sbjct: 761 YLDEAIQSYQLCLEINPKNDCCHENLGITYNEKDLHDDAIQSYQKCLEINPNIDSFYYNL 820
Query: 241 AALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 300
G+ G LD+A + ++CL + +PK + NL AY
Sbjct: 821 --------GNAYKAKGL-------LDEA--IKSYQKCL----ETNPKNNFCYNNLGIAYN 859
Query: 301 LTGDHRSSGKCLEKAAKLEPN 321
G H + + +K ++ PN
Sbjct: 860 EKGLHDEAIQSYQKCLEINPN 880
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 118/287 (41%), Gaps = 32/287 (11%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLR---CEAD--IARPE--LLSLVQIH 124
PK+ + LG Y+ G +A+ SY+K EI + C + IA E L +
Sbjct: 913 PKDDVCYNNLGNAYKGKGLHDEAIQSYQKCLEINPKNDGCHENLGIAYNEKGLQDEAIQY 972
Query: 125 HAQCLLPESSGDN---SLDKELEPEEL-EEILSKLKESMQSDTRQAVVWNTLGLILLKSG 180
+ QCL + D+ +L + + L +E + ++ ++ + + + LG+ + G
Sbjct: 973 YLQCLEINPNKDSCYQNLGNAYKAKGLYDEAIKSYQQCLEINPQNYGCYENLGIAYNEKG 1032
Query: 181 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ---DLILKDQ---NHP 234
+I L ++PN C NLG AY++ G +++ + +Q ++ K++ N+
Sbjct: 1033 LQDEAIQSYQKCLEINPNKDSCYNNLGNAYYEKGFQDEAIQSYQKCLEINPKNEGCYNNL 1092
Query: 235 AALINYAALLLCKYGSVLAGAGANTGEGACLD-----------QASAVNVAKECLLAALK 283
N L S N AC + Q A+ ++C L+
Sbjct: 1093 GIAYNEKGLQDEAIQSYQKYLEINPKNDACYNNLGNAYQAKGLQDEAIKQYQKC----LE 1148
Query: 284 ADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
+PK + NL NAY G + + +K ++ PN S Y +
Sbjct: 1149 INPKNEGCYENLGNAYNQKGLQDEAIQSYQKCLEMNPNKDSCYYNLG 1195
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 104/261 (39%), Gaps = 32/261 (12%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLR---CEADIA----RPELLSLVQIH 124
PKN H LG+ Y G +A+ SY+K EI + C ++ + L
Sbjct: 369 PKNDACHENLGITYNEKGLQDEAIQSYQKCLEINSKNGGCYGNLGIAYNQKGLQDEAIQS 428
Query: 125 HAQCLLPESSGDNSLDKELEPEELEEILSK----LKESMQSDTRQAVVWNTLGLILLKSG 180
+ +CL D+ + +++ +L K ++ ++ + + + LG+ +
Sbjct: 429 YQKCLEINPKNDDCYNNLGNSYKIKGLLDKAIKSYRKCLKINPKNDICHENLGIAYNEKD 488
Query: 181 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 240
+I L ++PN C NLG AY G ++++ + +Q + + +P Y
Sbjct: 489 LQDEAIQSYQKCLEINPNKDSCYYNLGNAYKAEGLLDEAIQSYQKCL---KINPKNNFCY 545
Query: 241 AALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 300
L G E LD+ A+ ++C L+ +P+ + NL AY
Sbjct: 546 NNL------------GIAYNEKGLLDE--AIQSYQKC----LEINPQNYVCYNNLGIAYN 587
Query: 301 LTGDHRSSGKCLEKAAKLEPN 321
G + + +K K+ PN
Sbjct: 588 QKGLQDEAIQSYQKFIKINPN 608
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 35/312 (11%)
Query: 33 LEFGVDADGDQSGLGTSSSSR---EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLG 89
LE + D LG + ++ +E + S + L P+N + LG+ Y G
Sbjct: 977 LEINPNKDSCYQNLGNAYKAKGLYDEAIKSYQQCL----EINPQNYGCYENLGIAYNEKG 1032
Query: 90 QPLKAVSSYEKAEEILLR---CEADIARPELLSLVQIH----HAQCLL--PESSG-DNSL 139
+A+ SY+K EI C ++ Q + +CL P++ G N+L
Sbjct: 1033 LQDEAIQSYQKCLEINPNKDSCYNNLGNAYYEKGFQDEAIQSYQKCLEINPKNEGCYNNL 1092
Query: 140 DKELEPEELE-EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPN 198
+ L+ E + ++ ++ + + +N LG G +I L ++P
Sbjct: 1093 GIAYNEKGLQDEAIQSYQKYLEINPKNDACYNNLGNAYQAKGLQDEAIKQYQKCLEINPK 1152
Query: 199 NCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN----YAA--LLLCKYGSVL 252
N C NLG AY Q G +++ + +Q + + N + N Y A LL S
Sbjct: 1153 NEGCYENLGNAYNQKGLQDEAIQSYQKCLEMNPNKDSCYYNLGNAYKAKGLLDEAIKSYQ 1212
Query: 253 AGAGANTGEGAC-------LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTG-- 303
N+ G C ++ + A + L+ +P+ + NL NAY G
Sbjct: 1213 KCLEINSKNGGCYGNLGIAYNELGLQDEAIQSYQKYLEINPENDVCYNNLGNAYKTKGLL 1272
Query: 304 DH--RSSGKCLE 313
D +S KCLE
Sbjct: 1273 DEAIKSYQKCLE 1284
>gi|188996284|ref|YP_001930535.1| hypothetical protein SYO3AOP1_0336 [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188931351|gb|ACD65981.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 557
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
LK+S+Q D + VW LG I +SG +I + ++L DPNN + + L Y
Sbjct: 187 LKKSLQIDKKYKPVWQLLGEIYRQSGNYDKAIEIYKNILKDDPNNLEALNRLFQIYVDKD 246
Query: 215 DMEQSAKCFQDLI-LKDQNHPAALINYAALLLCKYGS 250
D +A+ +I L +++ A L + LL KYG
Sbjct: 247 DFNNAAETIDKIIRLNPKDNDAILKKF--LLYIKYGK 281
>gi|357162940|ref|XP_003579571.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC-like [Brachypodium
distachyon]
Length = 983
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 82/203 (40%), Gaps = 14/203 (6%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
LEE ++ + ++Q+ A+ + L I + +L SI S + DP + N+G
Sbjct: 279 LEEAIACYQRALQARPDYAMAYGNLATIYYEQRQLDMSIHCYSQAILCDPRFVEAHNNMG 338
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL---------CKYGSVLAGAGAN 258
A +G +E++ CFQ ++ NHP AL N + + Y + +A
Sbjct: 339 NALKDAGRVEEAINCFQSCLILQANHPQALTNLGNIYMEWNMASAAASFYKAAIAVTSGL 398
Query: 259 TGE----GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 314
T Q + A C L+ DP AA N N + G + + +
Sbjct: 399 TSPFNNLAVIYKQQGSYADAIACYTEVLRIDPTAADALVNRGNTFKEFGRVAEAIQDYMQ 458
Query: 315 AAKLEPNCMSTRYAVAVSRIKDA 337
AA + P M+ +A S KD+
Sbjct: 459 AATIMPT-MAEAHANLASAYKDS 480
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 23/171 (13%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
+SK +E++ D A + + + G + +I + + + N CD NL AY
Sbjct: 113 ISKNEEALAVDPGFAECYGNMANAWKEKGDIDLAICYYLTAIKIRSNFCDAWSNLASAYT 172
Query: 212 QSGDMEQSAKC-FQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASA 270
+ G + +A+C Q LIL + L A +N G +
Sbjct: 173 RKGRLHDAAQCCRQALILNPR--------------------LVDAHSNLGN--LMKAQGF 210
Query: 271 VNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
V A C L A++ DP A W+NLA + GD + + ++A KL P+
Sbjct: 211 VEEAYTCYLEAIRIDPHFAIAWSNLAGLFMEVGDLNKAMQYYKEAVKLNPS 261
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 105/296 (35%), Gaps = 35/296 (11%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
W+ L + GRL + L ++P D NLG G +E++ C+ + I
Sbjct: 164 WSNLASAYTRKGRLHDAAQCCRQALILNPRLVDAHSNLGNLMKAQGFVEEAYTCYLEAIR 223
Query: 229 KDQNHPAALINYAALLL---------------CKYGSVLAGAGANTGEGACLDQASAVNV 273
D + A N A L + K A A N +G +
Sbjct: 224 IDPHFAIAWSNLAGLFMEVGDLNKAMQYYKEAVKLNPSFADAHLN--QGNVYKAMGMLEE 281
Query: 274 AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSR 333
A C AL+A P A + NLA YY S C +A +P + + +
Sbjct: 282 AIACYQRALQARPDYAMAYGNLATIYYEQRQLDMSIHCYSQAILCDPRFVEAHNNMG-NA 340
Query: 334 IKDAERSQEPTE----QLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAF 389
+KDA R +E L N ++ G+ + +E +A A A+ K V +
Sbjct: 341 LKDAGRVEEAINCFQSCLILQANHPQALTNLGN-IYMEWNMASAA-ASFYKAAIAVTSGL 398
Query: 390 ETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 445
+ N L+ + + G+ A C L+ DP AA N N +
Sbjct: 399 TSPFNNLAVIYKQQGSYADAI-----------ACYTEVLRIDPTAADALVNRGNTF 443
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 108/268 (40%), Gaps = 46/268 (17%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL----SLVQIHHAQ 127
P A AH G +Y+ +G +A++ Y++A + ARP+ +L I++ Q
Sbjct: 260 PSFADAHLNQGNVYKAMGMLEEAIACYQRALQ---------ARPDYAMAYGNLATIYYEQ 310
Query: 128 CLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSIS 187
+L+ + +++ D R N +G L +GR++ +I+
Sbjct: 311 ------------------RQLDMSIHCYSQAILCDPRFVEAHNNMGNALKDAGRVEEAIN 352
Query: 188 VLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALI---- 238
S L + N+ + NLG Y + +A ++ I L + A+I
Sbjct: 353 CFQSCLILQANHPQALTNLGNIYMEWNMASAAASFYKAAIAVTSGLTSPFNNLAVIYKQQ 412
Query: 239 -NYAALLLCKYGSVL----AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWA 293
+YA + C Y VL A A G + V A + + A P A A
Sbjct: 413 GSYADAIAC-YTEVLRIDPTAADALVNRGNTFKEFGRVAEAIQDYMQAATIMPTMAEAHA 471
Query: 294 NLANAYYLTGDHRSSGKCLEKAAKLEPN 321
NLA+AY +G+ S+ +KA L P+
Sbjct: 472 NLASAYKDSGNQESAITSYKKALCLRPD 499
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 67/174 (38%), Gaps = 21/174 (12%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
+EE + E+++ D A+ W+ L + ++ G L ++ + ++P+ D N G
Sbjct: 211 VEEAYTCYLEAIRIDPHFAIAWSNLAGLFMEVGDLNKAMQYYKEAVKLNPSFADAHLNQG 270
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 267
Y G +E++ C+Q + Q P + Y L Y +
Sbjct: 271 NVYKAMGMLEEAIACYQRAL---QARPDYAMAYGNLATIYY------------------E 309
Query: 268 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
++++ C A+ DP+ N+ NA G + C + L+ N
Sbjct: 310 QRQLDMSIHCYSQAILCDPRFVEAHNNMGNALKDAGRVEEAINCFQSCLILQAN 363
>gi|254000485|ref|YP_003052548.1| hypothetical protein Msip34_2784 [Methylovorus glucosetrophus
SIP3-4]
gi|253987164|gb|ACT52021.1| TPR repeat-containing protein [Methylovorus glucosetrophus SIP3-4]
Length = 560
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
++ E LSK S+ D Q W +G I L++ + Q + + +L +DP+N D I
Sbjct: 33 QDYFEALSKYTASLSLDGNQVPTWVRIGKIFLRTMKYQQARETMEFVLGMDPHNVDAIYG 92
Query: 206 LGIAYFQSGDMEQSAKCFQD 225
L I+YF G +E+ A+ F D
Sbjct: 93 LAISYFYLGKLEE-ARAFID 111
>gi|182415012|ref|YP_001820078.1| hypothetical protein Oter_3198 [Opitutus terrae PB90-1]
gi|177842226|gb|ACB76478.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1]
Length = 645
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 18/208 (8%)
Query: 46 LGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEIL 105
L S REE +++ + V R P + AH LGL RLG +A++ YE+A E+
Sbjct: 432 LARSPERREEAIAAYR----EVLRLKPDHPDAHHGLGLELARLGDKAQAMAEYERAIELR 487
Query: 106 L-------RCEADIARPELLSLVQIHHAQCLLPESSG-----DNSLDKELE-PEELEEIL 152
R ++AR I H + L G N D L+ P+ L E +
Sbjct: 488 PTYAEAHHRLGVELARLGGRDQDAIAHLEAALRVKPGLAEAHANLADLLLKTPDRLPEAM 547
Query: 153 SKLKESMQSDTRQAVVWNTLGLILLK-SGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
+ +E++ D A V +G +L GR +IS + L ++PN+ D L IAY
Sbjct: 548 AHYEEALHFDPTLAWVHCRIGFVLSHLPGRQHEAISRYETALRIEPNSIDAHNGLAIAYI 607
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALIN 239
G + + + ++ ++ D + +A N
Sbjct: 608 MMGRADAARREWETVVRIDPSQESARRN 635
>gi|196012190|ref|XP_002115958.1| hypothetical protein TRIADDRAFT_59913 [Trichoplax adhaerens]
gi|190581734|gb|EDV21810.1| hypothetical protein TRIADDRAFT_59913 [Trichoplax adhaerens]
Length = 1265
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 40/208 (19%)
Query: 59 SLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPEL- 117
SLK L + AH++ LG+ Y+R G+ +A+S ++K+ EI L + P+L
Sbjct: 1046 SLKIRLSLFGHNHHQVAHSYSSLGICYRRQGKYKEAISMHKKSLEIRLSVQGH-NHPDLV 1104
Query: 118 LSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQ--------SDTRQAVVW 169
++ V I G+ LD+ + EE +S K S++ + + A ++
Sbjct: 1105 MTYVNI-----------GNVYLDQ----GKYEESISMYKNSLKIQLSILGDNHSDLAAIY 1149
Query: 170 NTLGLILLKSGRLQSSISVLSSLLAVD--------PNNCDCIGNLGIAYFQSGDMEQSAK 221
N +G K G+L+ +IS LL V P+ D NLG Y + E++
Sbjct: 1150 NNMGNAYFKQGKLKEAISTYKKLLKVQCSFLGHNHPSIADSYSNLGAIYCDQKNHEEAIS 1209
Query: 222 CFQD------LILKDQNHPAALINYAAL 243
F+ L+L D NHPA Y A+
Sbjct: 1210 MFKKSLRIRRLVL-DHNHPAIASLYFAI 1236
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 115/282 (40%), Gaps = 48/282 (17%)
Query: 59 SLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEAD-----IA 113
SL+ L + + P A ++ LG +YQ + A+S Y+K+ +I L D A
Sbjct: 250 SLQIRLSALGQTHPDVAKSYNNLGKIYQSQKKYKVAISLYKKSLKIKLSALGDNHLDVAA 309
Query: 114 RPELLSLVQIHHAQCLLPESSGDNSLDKE---LEPEELEEILSKLKESMQSDTRQAVVWN 170
+ L +V GD KE + + L+ LS L + D Q+ +N
Sbjct: 310 SYDNLGIVY------------GDQGKHKEAISMLEKSLKIRLSALGHN-HPDVTQS--YN 354
Query: 171 TLGLILLKSGRLQSSISVLSSLLAV--------DPNNCDCIGNLGIAYFQSGDMEQSAKC 222
+G I K G+L+ +IS+L L + P+ NLG Y E++
Sbjct: 355 NIGTIYRKQGKLEEAISMLEKSLKIRLSAHGHNHPDVAASYYNLGWVYCDQNKYEKAISV 414
Query: 223 FQD-----LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKEC 277
F++ L + D NHP +Y ++ G V N E A S + +
Sbjct: 415 FEESLKIRLSVYDHNHPDVARSYNSI-----GIVY--RNQNKHEEAI----SMYEKSLKI 463
Query: 278 LLAALKADP-KAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 318
L+ L ++ A ++ N+ N YY G + + EK+ K+
Sbjct: 464 YLSTLGSNHLDVAALYNNIGNIYYNQGKYEDAISMYEKSHKI 505
>gi|198282345|ref|YP_002218666.1| hypothetical protein Lferr_0200 [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|198246866|gb|ACH82459.1| TPR repeat-containing protein [Acidithiobacillus ferrooxidans ATCC
53993]
Length = 505
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 171 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 230
LG +L K GRL + ++L L + P+ D + NLG+ Q G E++ FQ + +
Sbjct: 431 NLGAVLSKQGRLDEAETILRQALTIMPDQADALVNLGVILRQRGCPEEAKTAFQQALTAN 490
Query: 231 QNHPAALINYAALL 244
NHP AL+N A +
Sbjct: 491 PNHPEALVNLGATI 504
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 110/269 (40%), Gaps = 51/269 (18%)
Query: 56 KVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAE-EILLRCEADI-- 112
+ S + ++ V MP NA + F+LG + +V +E EI R I
Sbjct: 202 RYSEAEHAIMKVLSLMPDNAESIFILGAI---------SVGKKRLSEGEIAFRKALSIKP 252
Query: 113 ARPE-LLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNT 171
A PE L++L I Q + E+ G ++P+ LE ++
Sbjct: 253 AYPEALMNLGAILSDQGRVDEAIGTFRKALTIKPDYLEALMR------------------ 294
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
LG+ L + R+ + +VL LA+ P+ + + NLG+ G E++ + +
Sbjct: 295 LGVALGRQDRMDEAETVLRKALAIKPDYPEALMNLGVTLGHEGRWEETETLLRQALTIKP 354
Query: 232 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 291
++P AL+N A L + +G CLD+A N+ + L A++ D A +
Sbjct: 355 DYPEALMNLGAAL--------------SRQGRCLDEAE--NILRRTL--AIQPDHPDALV 396
Query: 292 WANLANAYYLTGDHRSSGKCLEKAAKLEP 320
NL G + L +A ++P
Sbjct: 397 --NLGATLNKQGRWNEAETILRQAVAIKP 423
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 21/116 (18%)
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
L Y Q+G ++++ + +++++++ NH A N+ G
Sbjct: 23 LATHYHQTGRLKEAEQLYRNILVEQPNH---------------------AEVNSNMGVLA 61
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
Q +N A AAL +DPK WAN Y TG + + L+++ ++ N
Sbjct: 62 SQTGRINDALYFFQAALGSDPKNGQTWANYMLLLYNTGRTQEASSALQQSLAIDKN 117
>gi|282163899|ref|YP_003356284.1| hypothetical protein MCP_1229 [Methanocella paludicola SANAE]
gi|282156213|dbj|BAI61301.1| hypothetical protein [Methanocella paludicola SANAE]
Length = 244
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 77/181 (42%), Gaps = 23/181 (12%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
W GL+ + G L +++ L L +DP + + G ++ G+ +++ + ++ I
Sbjct: 72 WFLKGLLYYQRGNLMAALGYLEEALDIDPKHVEARSVAGNCHYYMGEYKEALEYYETAIK 131
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
D+ +P A N +G L N A +C L+ +P
Sbjct: 132 IDRAYPKAWYN---------------------KGVVLSDIRLYNEAIQCYEEVLRINPGV 170
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST--RYAVAVSRIKDAERSQEPTEQ 346
A +W N Y + + + +CL+++ ++ P ++T A A+ R+ + + E E+
Sbjct: 171 AVVWTNKGYCYAMLNQYTEALECLDRSLEINPEDVTTLNNKAAALRRLGRDDEAAEYDEK 230
Query: 347 L 347
+
Sbjct: 231 V 231
>gi|386002705|ref|YP_005921004.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
gi|357210761|gb|AET65381.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
Length = 660
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 115/339 (33%), Gaps = 57/339 (16%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
EE L++L ++ +D WN GLIL GR + ++ + L DP N G+
Sbjct: 253 EEALARLDGAVGADPGDKAAWNDRGLILGVLGRYEEAVESFDAALRADPGYLLAWNNRGL 312
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLC---------KYGSVL----AGA 255
A G E++ + + I D + A N L Y S L A A
Sbjct: 313 ALANLGRSEEALESYNRSIDIDPSFALAWYNRGRALFDLERYDEAVEAYDSALEVEPAFA 372
Query: 256 GANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDH---------- 305
A GA L A E AL+ DP W N + YL G +
Sbjct: 373 LAWNNRGAALAALGREEEALESYDRALEIDPGYEIAWYNRGSVLYLEGRYFDAIKAFDEA 432
Query: 306 ---------------------RSSGK---CLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ 341
R G+ C EKA +L+P T + V+ + D R+
Sbjct: 433 IRFNPTSADAWHSKGHALYQMRRPGEALVCYEKALELDPGRAETWHHRGVA-LADLNRAA 491
Query: 342 EPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEE 401
E E A E DP + EPP G A E A A T EL
Sbjct: 492 EAAEAFDRA--------LELDP-EYEPPWYRKGILAYSSGRPEEALAHFTRAAELDPGHA 542
Query: 402 CAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWAN 440
A L + A E + AL+AD A W N
Sbjct: 543 EAWNNRGWILFTLGDTDEALESIDRALEADTALAEGWNN 581
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 132/382 (34%), Gaps = 82/382 (21%)
Query: 137 NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVD 196
N D+E+ E E L D VVW LG L GR+ ++ + L +D
Sbjct: 112 NLTDREMAVEAFERALG-------IDPEDGVVWYELGNALSFLGRVDEALQAYNRSLTID 164
Query: 197 PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN----------------- 239
P N N G+ G E++A F+ I D + AA N
Sbjct: 165 PENGKAWNNRGLILGALGRYEEAASSFERAISSDPDLAAAWQNRGNALRALGRPEEALEC 224
Query: 240 YAALLLCKYGSV----------------------LAGA-GANTGEGACL-DQASAVNV-- 273
YA+ L G V L GA GA+ G+ A D+ + V
Sbjct: 225 YASALAIDSGLVGSWKGAAELLRALGRDEEALARLDGAVGADPGDKAAWNDRGLILGVLG 284
Query: 274 ----AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAV 329
A E AAL+ADP W N A G + + ++ ++P+ Y
Sbjct: 285 RYEEAVESFDAALRADPGYLLAWNNRGLALANLGRSEEALESYNRSIDIDPSFALAWYNR 344
Query: 330 AVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAF 389
+ + D ER E E A +++EP FA AA
Sbjct: 345 GRA-LFDLERYDEAVEAYDSA-------------LEVEP-----AFALAWNNRGAALAAL 385
Query: 390 ETEENELSKME---ECAGAGESAFLDQASAVNV------AKECLLAALKADPKAAHIWAN 440
EE L + E E A+ ++ S + + A + A++ +P +A W +
Sbjct: 386 GREEEALESYDRALEIDPGYEIAWYNRGSVLYLEGRYFDAIKAFDEAIRFNPTSADAWHS 445
Query: 441 LANAYYLTGDHRSSGKCLEKVL 462
+A Y + C EK L
Sbjct: 446 KGHALYQMRRPGEALVCYEKAL 467
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 89/252 (35%), Gaps = 44/252 (17%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 128
R P +A A G ++ +P +A+ YEKA E+ D R E HH
Sbjct: 434 RFNPTSADAWHSKGHALYQMRRPGEALVCYEKALEL------DPGRAE-----TWHHRGV 482
Query: 129 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 188
L + L++ E E +++ D W G++ SGR + +++
Sbjct: 483 ALAD------LNRAAEAAE------AFDRALELDPEYEPPWYRKGILAYSSGRPEEALAH 530
Query: 189 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 248
+ +DP + + N G F GD +++ + + D N
Sbjct: 531 FTRAAELDPGHAEAWNNRGWILFTLGDTDEALESIDRALEADTALAEGWNN--------R 582
Query: 249 GSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSS 308
G VL G N A E + DP W N + Y G +R +
Sbjct: 583 GVVLTALGKN-------------EEALEAYNRTIDIDPAHPRAWNNKGASLYHLGRYREA 629
Query: 309 GKCLEKAAKLEP 320
C +A +L+P
Sbjct: 630 ADCYGRALELDP 641
>gi|94264810|ref|ZP_01288587.1| TPR repeat [delta proteobacterium MLMS-1]
gi|93454749|gb|EAT05007.1| TPR repeat [delta proteobacterium MLMS-1]
Length = 217
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Query: 139 LDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPN 198
+ +EL PE+ ++ L+ ++++D W LG + + +I L ++P+
Sbjct: 69 MSRELTPEQ-SRVMESLERAVEADPDNVQAWTQLGHLYFDTDHYSQAIKAYQRSLQLEPD 127
Query: 199 NCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 248
N D I +LG+ Y + G +++ F+ I H A N +LL +
Sbjct: 128 NPDVITDLGVMYRRDGQPQKAIDAFEQAIAISPGHETARFNLGVVLLHDF 177
>gi|418697816|ref|ZP_13258802.1| tetratricopeptide repeat protein [Leptospira kirschneri str. H1]
gi|421105548|ref|ZP_15566129.1| tetratricopeptide repeat protein [Leptospira kirschneri str. H2]
gi|409954425|gb|EKO13380.1| tetratricopeptide repeat protein [Leptospira kirschneri str. H1]
gi|410009452|gb|EKO63107.1| tetratricopeptide repeat protein [Leptospira kirschneri str. H2]
Length = 368
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E + K +++SD ++ + +LG + SG +S+I S L +DP+ D NLGI+
Sbjct: 185 EAIHLFKNAIKSDPEYSLSYLSLGYLYDSSGNFKSAIRYYKSALKIDPDYPDVWNNLGIS 244
Query: 210 YFQSGDMEQSAKCFQDLI 227
Y+ G ME S F+ I
Sbjct: 245 YYNDGQMENSISHFEKAI 262
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
K +++ D VWN LG+ G++++SIS + ++P + NLG Y Q D
Sbjct: 225 KSALKIDPDYPDVWNNLGISYYNDGQMENSISHFEKAIQLNPTFAYPVNNLGFIYIQKDD 284
Query: 216 MEQSAKCFQDLILKDQNHPAAL-INYAALLLCKY 248
+ K F I P L +A L +C Y
Sbjct: 285 FSDAKKYFLRSIELKPLEPFLLGETFAGLSICNY 318
>gi|300867796|ref|ZP_07112439.1| Tetratricopeptide repeat domain protein [Oscillatoria sp. PCC 6506]
gi|300334213|emb|CBN57611.1| Tetratricopeptide repeat domain protein [Oscillatoria sp. PCC 6506]
Length = 1016
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 50/93 (53%)
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
L +S++ D+ QA+ + +LGL+ K G ++ +A++PN D NLG +F+ G
Sbjct: 311 LFKSLEIDSSQAIQYYSLGLVFEKLGDFTQAVLAYQEAIALNPNYVDAYNNLGNIFFKVG 370
Query: 215 DMEQSAKCFQDLILKDQNHPAALINYAALLLCK 247
+ Q+ ++ I + H + +N A +LL +
Sbjct: 371 RLSQAESTYRQAIAVNPEHYGSYLNLANILLAQ 403
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 8/119 (6%)
Query: 154 KLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQS 213
K K++++ + Q VW+ L ++ + R Q + +L L +D + +LG+ + +
Sbjct: 276 KFKQALRWNRNQVEVWHHLAIVYYMTERYQDARDILFKSLEIDSSQAIQYYSLGLVFEKL 335
Query: 214 GDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVN 272
GD Q+ +Q+ I + N+ A N G++ G + + QA AVN
Sbjct: 336 GDFTQAVLAYQEAIALNPNYVDAYNN--------LGNIFFKVGRLSQAESTYRQAIAVN 386
>gi|193216265|ref|YP_001997464.1| tetratricopeptide domain-containing protein [Chloroherpeton
thalassium ATCC 35110]
gi|193089742|gb|ACF15017.1| Tetratricopeptide TPR_2 repeat protein [Chloroherpeton thalassium
ATCC 35110]
Length = 365
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 45/195 (23%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI----------LLRC--------EADIA 113
P A++ LGL Y+RL Q KAV++ KA +I L C +A +A
Sbjct: 178 PNFIDAYYNLGLSYKRLEQYDKAVAALNKAVQIGANDPAIFFSLGECYQGAGDNNQAIVA 237
Query: 114 R----------PELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDT 163
PE+L + + H EE ++ + +++ +
Sbjct: 238 FQNAFKLNSNDPEILYQIGVSHVNL-----------------EEYDQAIRAFGSALRMNK 280
Query: 164 RQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 223
A + LG+I K+ + Q+++ ++ + P N NLG+AY +GD E + + +
Sbjct: 281 DFAECYYNLGIIYTKTHKYQNALYAYEQVVRIQPENRTAYYNLGVAYINAGDTESARRTY 340
Query: 224 QDLILKDQNHPAALI 238
+ L+ D N +L+
Sbjct: 341 KSLLKLDINLAESLL 355
>gi|108761603|ref|YP_629581.1| hypothetical protein MXAN_1324 [Myxococcus xanthus DK 1622]
gi|108465483|gb|ABF90668.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
Length = 639
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 127/311 (40%), Gaps = 36/311 (11%)
Query: 48 TSSSSREEKVSSLKTGLVHVAR--KMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEIL 105
T+ ++ + + +T V AR + P +A A + LG + L P KAV+ +K L
Sbjct: 13 TAQAAEPDSATLERTAAVESARLAESPDDADALYRLGTAFLALNTPKKAVAPLKK----L 68
Query: 106 LRCEADIARPEL-----LSLV-QIHHAQCLL-------PESSGDNSLDKELEPEELEE-- 150
+ E D+ P+L L L + A+ +L PE S + ++ L L+E
Sbjct: 69 VAQEPDLIPPKLALARALRLSGEPEQARTVLDTAIAAFPEESTLRA-ERGLLARVLDERD 127
Query: 151 -ILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
+S+ +++ + A + LG L ++ R +I L +D NLG A
Sbjct: 128 VAISQYAVAVELAPQDAELRFNLGEALQRANRTDDAIEAYREALKLDAKLNVARVNLGKA 187
Query: 210 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL---------CKYGSVLAGA----G 256
+ G ++ + ++ + A N LL+ +Y LA A
Sbjct: 188 LAEKGLNGEAKETLREATRQKLGDTEAHYNLGVLLMRENDLDGAIAEYQRTLAAAPKHAS 247
Query: 257 ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAA 316
A+ G ++ A + L A+ ADPK A NL AYY GD + K E+A
Sbjct: 248 AHNNMGVAFNEKGDPRKATDAFLKAIAADPKFAEAHFNLGLAYYQLGDFARATKAFERAV 307
Query: 317 KLEPNCMSTRY 327
LEP S Y
Sbjct: 308 VLEPQRSSGPY 318
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
+S+L+ + D Q LG I L+ G + VL+S+L+VDP + + +G +
Sbjct: 507 VSELEAVVAKDPAQLEARAELGFIYLRGGDGAKARKVLTSVLSVDPRHSLGLLYMGHTLY 566
Query: 212 QSGDMEQSAKCFQDLILKDQN 232
Q G+ + + K F++ + D N
Sbjct: 567 QQGNTKGAEKSFRNAVQADPN 587
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E L K K+ ++DT LG++ + GR ++S L +++A DP + LG
Sbjct: 474 EGLLKPKDGEEADT---AALARLGIVHSRRGRPDLAVSELEAVVAKDPAQLEARAELGFI 530
Query: 210 YFQSGDMEQSAKCFQDLILKDQNHPAALI 238
Y + GD ++ K ++ D H L+
Sbjct: 531 YLRGGDGAKARKVLTSVLSVDPRHSLGLL 559
>gi|256829994|ref|YP_003158722.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfomicrobium baculatum
DSM 4028]
gi|256579170|gb|ACU90306.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfomicrobium baculatum
DSM 4028]
Length = 884
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 68/157 (43%), Gaps = 21/157 (13%)
Query: 170 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 229
N G L K G +I + L DPN NLG+AY ++G M+Q+ + FQ ++L
Sbjct: 29 NAEGEALFKQGNYNGAIVHYKNALEKDPNFVAARYNLGLAYIETGKMDQAEREFQKVLL- 87
Query: 230 DQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAA 289
QN +N+ G A AV V ++A L+ P A
Sbjct: 88 -QNPYDGRVNF-----------------QLGRIANFQNKPAVAVP--LIMAYLQEHPDDA 127
Query: 290 HIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
LA + ++GD S+ LEKA +EP+ +S +
Sbjct: 128 AALEQLAISATISGDPASAKGHLEKALAVEPDRISAK 164
>gi|338530109|ref|YP_004663443.1| hypothetical protein LILAB_02190 [Myxococcus fulvus HW-1]
gi|337256205|gb|AEI62365.1| TPR repeat-containing protein [Myxococcus fulvus HW-1]
Length = 639
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 126/312 (40%), Gaps = 38/312 (12%)
Query: 48 TSSSSREEKVSSLKTGLVHVAR--KMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEIL 105
T+ ++ + + +T V AR P +A A + LG + L P KAV+ +K L
Sbjct: 13 TAQAAEPDTATLERTAAVESARLEDSPDDADALYRLGTAFLALNTPKKAVAPLKK----L 68
Query: 106 LRCEADIARPELLSLVQ--------------IHHAQCLLPESSGDNSLDKELEPEELEE- 150
+ E D+ P+L +L + + A PE S + ++ L L+E
Sbjct: 69 VAQEPDLIPPKL-ALARALRLSGEPEQAREVLDTAIAAFPEESTLRA-ERGLLARVLDER 126
Query: 151 --ILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+S+ +++ + A + LG L ++ R +I L +D NLG
Sbjct: 127 DVAISQYAVAVELSPQDAELRFNLGEALQRASRTDDAIEAYREALKLDGKLNVARVNLGK 186
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL---------CKYGSVLAG----A 255
A + G ++ + ++ + A N LL+ +Y LA A
Sbjct: 187 ALAEKGLNGEAKETLREATRQKLGDTEAHYNLGVLLMRENDLDGAIAEYQRTLAADPKHA 246
Query: 256 GANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 315
A+ G L++ A + L A+ ADPK A NL AYY GD+ + K EKA
Sbjct: 247 SAHNNMGVALNEKGDPRKATQAFLKAIAADPKFAEAHFNLGLAYYQLGDNVRALKAFEKA 306
Query: 316 AKLEPNCMSTRY 327
LEP S Y
Sbjct: 307 VVLEPRRSSGPY 318
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
ELE +++K + Q D R LG I L+ G + VL+S+L+VDP + + +
Sbjct: 509 ELEAVVAK--DPAQLDARA-----ELGFIYLRGGDGAKARKVLTSVLSVDPRHTLGLLYM 561
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQN 232
G +Q G+ + + K F+D + D N
Sbjct: 562 GHTLYQQGNTKGAEKSFRDAVQVDPN 587
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E L K K+ ++DT LG++ + GR ++S L +++A DP D LG
Sbjct: 474 EGLLKPKDGEEADT---AALARLGIVHSRRGRPDLAVSELEAVVAKDPAQLDARAELGFI 530
Query: 210 YFQSGDMEQSAKCFQDLILKDQNHPAALI 238
Y + GD ++ K ++ D H L+
Sbjct: 531 YLRGGDGAKARKVLTSVLSVDPRHTLGLL 559
>gi|291571512|dbj|BAI93784.1| TPR domain protein [Arthrospira platensis NIES-39]
Length = 491
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 84/198 (42%), Gaps = 29/198 (14%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+L E + + ++ D A N LGL L G+L +I LA+D NN NL
Sbjct: 77 KLPEAIEAYRRALALDPNNAWAHNNLGLALADQGKLPEAIEAYRRALALDSNNAYAHNNL 136
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN--YAALLLCKYGSVLAGAGANTGEGAC 264
G+A G + ++ + ++ + D N+ A N YA L K
Sbjct: 137 GVALRNQGKLPEAIEAYRRALALDPNNAYAHNNLGYALYLQGKL---------------- 180
Query: 265 LDQASAVNVAKECL-LAALKADPKAAHIWA--NLANAYYLTGDHRSSGKCLEKAAKLEPN 321
A++ + L L + P +AH A NL A GD + +KA +L+PN
Sbjct: 181 ---PEAIDAYRTALALPDRRGTPASAHTLAHNNLGLALQQQGDLPGAIAEYKKAIRLDPN 237
Query: 322 CMSTRYAVAVSRIKDAER 339
+A+A S +++AER
Sbjct: 238 -----FAIAYSNLQEAER 250
>gi|15678100|ref|NP_275215.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
str. Delta H]
gi|2621106|gb|AAB84576.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 403
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 115/305 (37%), Gaps = 31/305 (10%)
Query: 177 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 236
LK G+ + ++ L PN+ + + + + E++ KC++ ++ + A
Sbjct: 27 LKQGKYKEALKEFRKALKASPNDPEILHYNAMTLLKLKRPEKALKCYEKILKNNPKLAEA 86
Query: 237 LINYAALL--LCKYGSVL-----------AGAGANTGEGACLDQASAVNVAKECLLAALK 283
N +L L +Y L G +GA LD A EC AL+
Sbjct: 87 WNNKGVVLKELKRYDEALECYERALQIDPQDDGTWNNKGALLDTIGKPEKAIECYEKALE 146
Query: 284 ADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEP 343
+ K A W N N G + + +C EKA ++ + Y A+ ++ +R E
Sbjct: 147 INQKNAKAWYNKGNGLRSLGKYEEALECYEKALQINAEFVEAWYNKALI-FEELKRYDEA 205
Query: 344 TEQLSWAGNEMASILREGDPVQIEPPI--AWAGFAAVQKTHHEVAAAFETEEN--ELSKM 399
E G +QI+P W A+ T + A E E E+++
Sbjct: 206 LECY-------------GRALQIDPQDDGTWNNKGALLDTIGKPEKAIECYEKALEINQK 252
Query: 400 EECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 459
A + L++ + A EC AL+ + + WAN G + + +C E
Sbjct: 253 NAKAWNNKGVVLEELKRYDEALECYEKALEINLENDETWANKGVLLRKLGKYEEALECFE 312
Query: 460 KVLMV 464
K L +
Sbjct: 313 KALEI 317
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 118/325 (36%), Gaps = 35/325 (10%)
Query: 159 MQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQ 218
++++ + A WN G++L + R ++ L +DP + N G G E+
Sbjct: 77 LKNNPKLAEAWNNKGVVLKELKRYDEALECYERALQIDPQDDGTWNNKGALLDTIGKPEK 136
Query: 219 SAKCFQDLILKDQNHPAALIN----------YAALLLCKYGSVLAGAG---ANTGEGACL 265
+ +C++ + +Q + A N Y L C ++ A A +
Sbjct: 137 AIECYEKALEINQKNAKAWYNKGNGLRSLGKYEEALECYEKALQINAEFVEAWYNKALIF 196
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
++ + A EC AL+ DP+ W N G + +C EKA LE N +
Sbjct: 197 EELKRYDEALECYGRALQIDPQDDGTWNNKGALLDTIGKPEKAIECYEKA--LEINQKNA 254
Query: 326 R----YAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKT 381
+ V + +K + + E E+ + +E WA + +
Sbjct: 255 KAWNNKGVVLEELKRYDEALECYEK--------------ALEINLENDETWANKGVLLRK 300
Query: 382 HHEVAAAFETEENELSKMEECAGAGE--SAFLDQASAVNVAKECLLAALKADPKAAHIWA 439
+ A E E L E A A E L+ A +C ALK +P+ +W
Sbjct: 301 LGKYEEALECFEKALEINPEFADAWEWKGIILEDLKKPEEALKCYEKALKLNPQDKTLWY 360
Query: 440 NLANAYYLTGDHRSSGKCLEKVLMV 464
G H+ + K +K L +
Sbjct: 361 MQGKTLQKLGKHQKAKKSYKKALKI 385
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 102/261 (39%), Gaps = 36/261 (13%)
Query: 73 KNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPE 132
KNA A + G + LG+ +A+ YEKA L+ A+ V+ + + L+ E
Sbjct: 150 KNAKAWYNKGNGLRSLGKYEEALECYEKA----LQINAE--------FVEAWYNKALIFE 197
Query: 133 SSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSL 192
E + +E L ++Q D + WN G +L G+ + +I
Sbjct: 198 -----------ELKRYDEALECYGRALQIDPQDDGTWNNKGALLDTIGKPEKAIECYEKA 246
Query: 193 LAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGS 250
L ++ N N G+ + +++ +C++ + + + N LL L KY
Sbjct: 247 LEINQKNAKAWNNKGVVLEELKRYDEALECYEKALEINLENDETWANKGVLLRKLGKYEE 306
Query: 251 VLA-----------GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 299
L A A +G L+ A +C ALK +P+ +W
Sbjct: 307 ALECFEKALEINPEFADAWEWKGIILEDLKKPEEALKCYEKALKLNPQDKTLWYMQGKTL 366
Query: 300 YLTGDHRSSGKCLEKAAKLEP 320
G H+ + K +KA K++P
Sbjct: 367 QKLGKHQKAKKSYKKALKIDP 387
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 89/239 (37%), Gaps = 44/239 (18%)
Query: 82 GLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDK 141
G + +G+P KA+ YEKA EI +A+ + +G SL K
Sbjct: 125 GALLDTIGKPEKAIECYEKALEI-----------------NQKNAKAWYNKGNGLRSLGK 167
Query: 142 ELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCD 201
EE L ++++Q + W LI + R ++ L +DP +
Sbjct: 168 ------YEEALECYEKALQINAEFVEAWYNKALIFEELKRYDEALECYGRALQIDPQDDG 221
Query: 202 CIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGE 261
N G G E++ +C++ + +Q + A N +
Sbjct: 222 TWNNKGALLDTIGKPEKAIECYEKALEINQKNAKAWNN---------------------K 260
Query: 262 GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
G L++ + A EC AL+ + + WAN G + + +C EKA ++ P
Sbjct: 261 GVVLEELKRYDEALECYEKALEINLENDETWANKGVLLRKLGKYEEALECFEKALEINP 319
>gi|388841092|gb|AFK79142.1| hypothetical protein PCC8801_1300 [uncultured bacterium F39-01]
Length = 645
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 70/173 (40%), Gaps = 57/173 (32%)
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
L+ +++ AV +N LG L K+GR Q +I + + ++PN+ + + NLG AY+ +
Sbjct: 274 LRNAVRLKGDDAVAYNNLGASLYKAGRYQEAIEAFGNAVRLNPNDVEALNNLGAAYYVTA 333
Query: 215 DMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 274
+++ + FQ AV V
Sbjct: 334 QYDRALQNFQ--------------------------------------------QAVRV- 348
Query: 275 KECLLAALKAD-PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
KAD P A + NL NAYY+TG +R + +A +L+ + + R
Sbjct: 349 --------KADSPDAQY---NLGNAYYMTGKYREATAAYRQAIQLKADYVEAR 390
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 63/150 (42%), Gaps = 29/150 (19%)
Query: 81 LGLMYQRLGQPLKAVSSYEKAEEILLRC---EADIARPELLSLVQIHHAQCLLPESSGDN 137
LG +Y +LGQ Y++A ++L R AD A Q + L
Sbjct: 471 LGAVYNKLGQ-------YQEAVDVLRRAVQGNADFAE------AQYNLGTALYNRG---- 513
Query: 138 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 197
+ E ++ L+++++ A +N+LG L K+ + +I L++ P
Sbjct: 514 ---------QFNEAVTSLQQAVRLKPDYAEAYNSLGSALYKAQQFDPAIEAYKKALSLKP 564
Query: 198 NNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
+ NLG YF++ ++A F++ +
Sbjct: 565 GTAETNNNLGTVYFRTKRYPEAAGSFKEAV 594
>gi|337288211|ref|YP_004627683.1| hypothetical protein TOPB45_0653 [Thermodesulfobacterium sp. OPB45]
gi|334901949|gb|AEH22755.1| Tetratricopeptide TPR_2 repeat-containing protein
[Thermodesulfobacterium geofontis OPF15]
Length = 202
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 21/148 (14%)
Query: 171 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 230
LG++L + G L+ + + L PN+ + NLG+ F+ G+++++ KC++ + +
Sbjct: 60 NLGILLAQEGELEEAKKAFTFTLKYYPNSVEAWNNLGLIEFELGNLDEAEKCYRKALEIN 119
Query: 231 QNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAH 290
+ + IN + +L+ K G + SA+ AK P+ A
Sbjct: 120 ETFAESWINLSTILIEK--------------GLFKEAISALEKAKTF-------APENAV 158
Query: 291 IWANLANAYYLTGDHRSSGKCLEKAAKL 318
I+ NLA AYY D S+ K L A ++
Sbjct: 159 IYNNLAVAYYYLKDKESALKNLNLAKEM 186
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 23/192 (11%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
EE L L++ + + L + G+ Q + +L +DP + + + NLGI
Sbjct: 4 EEALKALEKEAMENPHSVFAQHKLAIAYFNLGKFQEAKEAFKRVLKLDPFHFEAMINLGI 63
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
Q G++E++ K F + + +P ++ + L L ++ E LD+
Sbjct: 64 LLAQEGELEEAKKAFTFTL---KYYPNSVEAWNNLGLIEF------------ELGNLDE- 107
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN--CMSTR 326
A++C AL+ + A W NL+ G + + LEKA P +
Sbjct: 108 -----AEKCYRKALEINETFAESWINLSTILIEKGLFKEAISALEKAKTFAPENAVIYNN 162
Query: 327 YAVAVSRIKDAE 338
AVA +KD E
Sbjct: 163 LAVAYYYLKDKE 174
>gi|326435668|gb|EGD81238.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
Length = 863
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 99/249 (39%), Gaps = 32/249 (12%)
Query: 81 LGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLD 140
+G + G+ KA++ YE A + LR E + +S + +A C S G+
Sbjct: 277 VGSVLSEFGEHDKAIAYYETALAVYLRTEKEKGENVAVSNNNLGNAYC----SKGEYDRA 332
Query: 141 KELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVD---- 196
++L + L E S A +N LG G +I LA+
Sbjct: 333 IAFYEKDLAITVETLGEKHPS---TASTYNNLGTAYYSKGDFDKAIHYYKKALAITVETL 389
Query: 197 ----PNNCD-CIGNLGIAYFQSGDMEQSAKCFQDLILK-----DQNHPAALINYAALLLC 246
P+ D C+G LGIAY + G+++++ ++ + + HP Y +
Sbjct: 390 GEKHPSTADSCVG-LGIAYEKKGELDRAIAFYEQALAIMVEALGEKHPNTADTYNNI--- 445
Query: 247 KYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHR 306
GSV G C D+A AV V E L + P A + NL AY+ GD+
Sbjct: 446 --GSVYYSKGDYDRAIECFDKALAVRV--ETL---GEKHPSTAQTYNNLGGAYHDKGDYD 498
Query: 307 SSGKCLEKA 315
+ EKA
Sbjct: 499 KAIALYEKA 507
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 31/161 (19%)
Query: 172 LGLILLKSGRLQSSISVLSSLLAV--------DPNNCDCIGNLGIAYFQSGDMEQSAKCF 223
LG+ K G L +I+ LA+ PN D N+G Y+ GD +++ +CF
Sbjct: 403 LGIAYEKKGELDRAIAFYEQALAIMVEALGEKHPNTADTYNNIGSVYYSKGDYDRAIECF 462
Query: 224 QDLI-----LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECL 278
+ + HP+ Y + L GA + G D A+ + ++ L
Sbjct: 463 DKALAVRVETLGEKHPSTAQTY---------NNLGGAYHDKG-----DYDKAIALYEKAL 508
Query: 279 LAALKA----DPKAAHIWANLANAYYLTGDHRSSGKCLEKA 315
++A P A + NL AY G++ + C EKA
Sbjct: 509 AITVEALGEKHPSTATSYNNLGGAYARKGEYDKAIACYEKA 549
>gi|340623750|ref|YP_004742203.1| hypothetical protein GYY_02905 [Methanococcus maripaludis X1]
gi|339904018|gb|AEK19460.1| hypothetical protein GYY_02905 [Methanococcus maripaludis X1]
Length = 409
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/330 (18%), Positives = 121/330 (36%), Gaps = 47/330 (14%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
L EE ++ L + ++ D W G+ L G S+ D
Sbjct: 103 LSQEEYDKALYYYNKLLEIDNSVGKTWFYKGICLKMLGNYDESVEAFDKSTG-DYETLVL 161
Query: 203 IGN-LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGE 261
I N LG Y+Q+G+ +++ +CF + D N +L G+
Sbjct: 162 IWNDLGYCYYQNGEYDKATECFDKALTLDGNLKYSL---------------------NGK 200
Query: 262 GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL--- 318
G C ++ +A EC A+ D N + Y + + + C EKA L
Sbjct: 201 GLCYEKKEQYTMAIECFDKAVCQDECYYDAIYNKGISCYKSKKYSCAISCFEKALDLNNS 260
Query: 319 EPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEP--PIAWAGFA 376
P C + A ++ + + E+ ++L ++++ P+ W+G
Sbjct: 261 NPYCYFYK-ANSLKSLGEYEK----------------AVLNYKKAIELDSKNPVFWSGLG 303
Query: 377 AVQKTHHEVAAAFETEEN--ELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKA 434
+E ++ ++ E EL+ ++ + + + N + C AL +
Sbjct: 304 LSYNYLNEYNSSIQSYEKAVELNPKDDISWSNLGYLHYKTKKYNESIFCFEKALDLNSNN 363
Query: 435 AHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
+ W L N+Y L ++ + C EK + +
Sbjct: 364 KYAWNGLGNSYLLLKNYEKALMCYEKAIEI 393
>gi|449449593|ref|XP_004142549.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC-like [Cucumis
sativus]
Length = 975
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 110/263 (41%), Gaps = 38/263 (14%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P+ A+ LG +Y+ LG P +A+ Y++A I +R IA L S
Sbjct: 262 PQFPDAYLNLGNVYKALGMPQEAIVCYQRA--IQMRPNYAIAYGNLAS------------ 307
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
E +L+ + K+++ D R +N LG L + GR++ +I +
Sbjct: 308 ---------TYYEQSQLDMAILHYKQAITCDPRFLEAYNNLGNALKEFGRVEEAIQCYNQ 358
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALI-----NYA 241
LA+ P++ + NLG Y + + +A ++ + L + A+I NYA
Sbjct: 359 CLALQPSHPQALTNLGNIYMEWNMVPAAASYYKATLRVTTGLSAPFNNLAIIYKQQGNYA 418
Query: 242 ALLLCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 297
+ C Y VL A G + V+ A + + A+ P A ANLA+
Sbjct: 419 DAISC-YNEVLRIDPLAADGLVNRGNTYKEIGRVSEAIQDYIRAINIRPTMAEAHANLAS 477
Query: 298 AYYLTGDHRSSGKCLEKAAKLEP 320
AY +G ++ K ++A L P
Sbjct: 478 AYKDSGLVEAAIKSYKQALHLRP 500
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 21/174 (12%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+ + ++K +E+++ + R A + + + G + +I + + PN CD NL
Sbjct: 110 DFDMCIAKNEEALRIEPRFAECYGNMANAWKEKGNIDLAIRYYLHAIELRPNFCDAWSNL 169
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
AY + G + ++A+C + AL L +L A +N G +
Sbjct: 170 ASAYMRKGRLGEAAQCCRQ----------------ALAL---NPLLVDAHSNLGN--LMK 208
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
V A C L AL+ P A W+NLA + +GD + + ++A KL+P
Sbjct: 209 AQGMVQEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKP 262
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 80/203 (39%), Gaps = 16/203 (7%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E + + ++Q A+ + L + +L +I + DP + NLG
Sbjct: 282 QEAIVCYQRAIQMRPNYAIAYGNLASTYYEQSQLDMAILHYKQAITCDPRFLEAYNNLGN 341
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAG-------ANTGE 261
A + G +E++ +C+ + +HP AL N + + ++ V A A TG
Sbjct: 342 ALKEFGRVEEAIQCYNQCLALQPSHPQALTNLGNIYM-EWNMVPAAASYYKATLRVTTGL 400
Query: 262 GACLDQASAV-----NVAK--ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 314
A + + + N A C L+ DP AA N N Y G + + +
Sbjct: 401 SAPFNNLAIIYKQQGNYADAISCYNEVLRIDPLAADGLVNRGNTYKEIGRVSEAIQDYIR 460
Query: 315 AAKLEPNCMSTRYAVAVSRIKDA 337
A + P M+ +A S KD+
Sbjct: 461 AINIRPT-MAEAHANLASAYKDS 482
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 21/173 (12%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
++E S E+++ A+ W+ L + ++SG L ++ + + P D NLG
Sbjct: 213 VQEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPQFPDAYLNLG 272
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 267
Y G +++ C+Q I Q P I Y L Y +
Sbjct: 273 NVYKALGMPQEAIVCYQRAI---QMRPNYAIAYGNLASTYY------------------E 311
Query: 268 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
S +++A A+ DP+ + NL NA G + +C + L+P
Sbjct: 312 QSQLDMAILHYKQAITCDPRFLEAYNNLGNALKEFGRVEEAIQCYNQCLALQP 364
>gi|196011186|ref|XP_002115457.1| hypothetical protein TRIADDRAFT_59420 [Trichoplax adhaerens]
gi|190582228|gb|EDV22302.1| hypothetical protein TRIADDRAFT_59420 [Trichoplax adhaerens]
Length = 1106
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 162/438 (36%), Gaps = 72/438 (16%)
Query: 53 REEKVS----SLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC 108
EE +S SLK L + R P A ++ LG+ Y G+ +A+S YEK+ +I L
Sbjct: 489 HEEAISMYEKSLKIRLSVLGRYHPDVAKSYNNLGIAYNDQGKHEEALSMYEKSLKIQLSV 548
Query: 109 EADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQ--A 166
D P++ A+ S K E + E K++ S S A
Sbjct: 549 -FDHNHPDV--------AKSYNNMGSVYRHQGKHEEAISMYEKSLKIQLSAYSPNHPDVA 599
Query: 167 VVWNTLGLILLKSGRLQSSISVLS-----SLLAVDPNNCDC---IGNLGIAYFQSGDMEQ 218
+ +N LG++ G+ + +IS+ LL D N+ D N+G YF G E+
Sbjct: 600 ISYNNLGIVYNDQGKYEEAISMYKKSLKIQLLVYDHNHPDVAKSYSNIGEVYFNQGKHEE 659
Query: 219 SAKCFQD-----LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNV 273
+ ++ L+ + NHP +Y L G+V G A+++
Sbjct: 660 AISMYEKSLEITLLEFNHNHPDVSASYNNL-----GNVYDDQGK---------YEEAISM 705
Query: 274 AKECLLAALKA----DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY-- 327
++ L L P A + NL N Y G H + EK+ K+ + +
Sbjct: 706 YEKSLKIRLSVFGHNHPDVAKSYNNLGNVYNSQGKHEEAISMYEKSIKIRLSVFGHDHSD 765
Query: 328 -AVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVA 386
A + + I A +Q G +I ++I+ + V K+++ +
Sbjct: 766 VAGSYNNIGAAYSNQ---------GKHGEAISMYKKSLKIQLSVFGYNHPDVAKSYNNMG 816
Query: 387 AAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 446
A+ + K EE E + Q S P A + NL N Y
Sbjct: 817 TAYSNQ----GKHEEAICMYEKSLKSQLSVFG----------HNHPDTAKSYNNLGNEYL 862
Query: 447 LTGDHRSSGKCLEKVLMV 464
G H + EK L +
Sbjct: 863 DQGKHEEAIALYEKSLKI 880
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 134/338 (39%), Gaps = 73/338 (21%)
Query: 53 REEKVS----SLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC 108
EE +S SLK L + R P A ++ LG+MY G+ +A+S YEK+ +I L
Sbjct: 195 HEEAISMYEKSLKIRLSVLGRYHPDVAKSYNNLGIMYYNQGKHEEALSMYEKSLKIQLSV 254
Query: 109 EADIARPEL------LSLVQIHHAQCLLPESSGDNSLDKEL------EPE---------- 146
D P++ + V H + + SL +L P+
Sbjct: 255 -FDHNHPDVAKSYNNMGSVYRHQGKHEEAIFMYEKSLKIQLSVYSPNHPDVAKSYNNLGI 313
Query: 147 ------ELEEILSKLKESMQ--------SDTRQAVVWNTLGLILLKSGRLQSSISV---- 188
+ EE +S K+S++ + + +N +G G+ + +IS+
Sbjct: 314 VYNDQGKHEEAISMYKKSLKIQLSVYGHNHLDVSASYNNMGEAYSNQGKHEEAISMYEKS 373
Query: 189 ----LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ-----DLILKDQNHPAALIN 239
LS P+ N+G AYF G +E++ ++ L + NHP
Sbjct: 374 LKFQLSVFDHSHPDINKSYNNIGNAYFNLGKLEEAISMYKKSLKIQLSVFGHNHPD---- 429
Query: 240 YAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKA----DPKAAHIWANL 295
+ K + + A +N G+ A+++ K+ L A+ A P A + N+
Sbjct: 430 -----VAKLYNNMGAAHSNQGK-----HEEAISMYKKSLEIAISAYGHNHPNVASSYDNM 479
Query: 296 ANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSR 333
+A+ G H + EK+ K+ + + RY V++
Sbjct: 480 GSAFRHQGKHEEAISMYEKSLKIRLSVLG-RYHPDVAK 516
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 91/441 (20%), Positives = 166/441 (37%), Gaps = 88/441 (19%)
Query: 59 SLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL 118
SLK L+ P A ++ +G +Y G+ +A+S YEK+ EI L E + P++
Sbjct: 625 SLKIQLLVYDHNHPDVAKSYSNIGEVYFNQGKHEEAISMYEKSLEITL-LEFNHNHPDV- 682
Query: 119 SLVQIHHAQCLLPESSGDNSLDKELEPE-ELEEILSKLKESMQSDTRQAVV--------- 168
S+ N+L + + + EE +S ++S++ R +V
Sbjct: 683 --------------SASYNNLGNVYDDQGKYEEAISMYEKSLK--IRLSVFGHNHPDVAK 726
Query: 169 -WNTLGLILLKSGRLQSSISVLSSLLAV-----DPNNCDCIG---NLGIAYFQSGDMEQS 219
+N LG + G+ + +IS+ + + ++ D G N+G AY G ++
Sbjct: 727 SYNNLGNVYNSQGKHEEAISMYEKSIKIRLSVFGHDHSDVAGSYNNIGAAYSNQGKHGEA 786
Query: 220 AKCFQ-----DLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 274
++ L + NHP +Y + G+ + G + E C+ + S
Sbjct: 787 ISMYKKSLKIQLSVFGYNHPDVAKSYNNM-----GTAYSNQGKHE-EAICMYEKS----L 836
Query: 275 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLE--------PNCMSTR 326
K L P A + NL N Y G H + EK+ K++ PN
Sbjct: 837 KSQLSVFGHNHPDTAKSYNNLGNEYLDQGKHEEAIALYEKSLKIQLIIFDHNHPNV---- 892
Query: 327 YAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVA 386
A + + + A +Q E+ +I ++I+ + + K+++ +
Sbjct: 893 -ARSYNNMGAAYSNQGKHEE---------AIFMYKKSLKIQLSVFGHEHPDIAKSYNNIG 942
Query: 387 AAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 446
AA+ + K EE E + + S + P A + N+ AY
Sbjct: 943 AAYSNQ----GKHEEAISMYEKSLKIKLSVFDYNH----------PDVAASYNNMGAAYS 988
Query: 447 LTGDHRSSGKCLEKVLMVYCS 467
G H + EK L + S
Sbjct: 989 NQGKHEEAISMYEKALKIRLS 1009
>gi|158522636|ref|YP_001530506.1| hypothetical protein Dole_2626 [Desulfococcus oleovorans Hxd3]
gi|158511462|gb|ABW68429.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
Length = 587
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 70/154 (45%), Gaps = 21/154 (13%)
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
G +L GR +I L + LAVDPNN +LG A +G+ E + + F+ + +
Sbjct: 442 GEVLFLHGRNAEAIGQLEAALAVDPNNALAHYHLGRAMESAGNSEAAMRHFEKAVYLQPD 501
Query: 233 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 292
H A N LLC G + D+A V+ AL ADP A ++
Sbjct: 502 HVPAR-NSLGNLLCDTGRI--------------DEA-IVHYQN-----ALAADPSAFMVY 540
Query: 293 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
NLA A L GD+ ++G L+KA + P + R
Sbjct: 541 NNLATALTLKGDYEAAGDMLKKALAIHPGYATAR 574
>gi|296081161|emb|CBI18187.3| unnamed protein product [Vitis vinifera]
Length = 325
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 69/143 (48%)
Query: 94 AVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILS 153
V ++ ++L+R E D++ EL V+ A G L ++ P + +L
Sbjct: 158 GVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATELFELGAVMLRRKFYPAATKFLLQ 217
Query: 154 KLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQS 213
+++ D A V+N LG+ ++ G+L+ I+ + + + P NLG AY +
Sbjct: 218 AIEKWDGDDQDLAQVYNALGVSYVRDGKLEKGITQFENAVKLQPGYVTAWNNLGDAYEKK 277
Query: 214 GDMEQSAKCFQDLILKDQNHPAA 236
D++ + K F++++L D N+ A
Sbjct: 278 KDLKSALKAFEEVLLFDPNNKVA 300
>gi|124024108|ref|YP_001018415.1| hypothetical protein P9303_24171 [Prochlorococcus marinus str. MIT
9303]
gi|123964394|gb|ABM79150.1| Hypothetical protein P9303_24171 [Prochlorococcus marinus str. MIT
9303]
Length = 733
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 23/184 (12%)
Query: 81 LGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL--------------SLVQIHHA 126
LG+ ++ G+ A++S+ KA EI + D PE+ + +
Sbjct: 258 LGIAFKAKGEISPAINSWRKALEI----KTDF--PEVYYNLGSIYLDQGNIETAINFFKK 311
Query: 127 QCLLPESSGD--NSLDKEL-EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQ 183
+L E+ + N+L L E EL+ ++ K+++ N LG + G L+
Sbjct: 312 ALILKENYPEALNNLGNSLQEKGELDAAIAAYKKALNHKPSYREAQNNLGCVYRAQGDLE 371
Query: 184 SSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL 243
+SI + LA+ P++ + + NLG + + GD+E + F + I + N+P A N +
Sbjct: 372 NSIRIFKKALALHPDHPEILSNLGTSLEEKGDLEAAISSFNNAISNNSNYPTAHYNLSLC 431
Query: 244 LLCK 247
LL K
Sbjct: 432 LLSK 435
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 138 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 197
SL +E +E EEI ++L +++ T + + +LG+I GR Q I++L L ++P
Sbjct: 23 SLFQEGRIKEAEEIYTRL---IKAGTNNHLTYGSLGIIYGIEGRWQELIAILEKALKLEP 79
Query: 198 NNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL 245
N D +GIA + ++E + + FQ + + N P + N LL
Sbjct: 80 NYSDAHNYIGIALKRLDNLEAAVESFQKALSINPNCPKSNYNLGNALL 127
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 114/305 (37%), Gaps = 50/305 (16%)
Query: 19 GKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLK--TGLVHVARKMPKNAH 76
GK S I+ + +A++F D LG + + + +++ +H+ P+
Sbjct: 130 GKLDSAIAF-LKTAVDFKPDFSEAHYNLGIAYLAIDNIAAAINYLNNSLHLKPAFPE--- 185
Query: 77 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGD 136
AH LGL Q G+ A+SS+ KA EI +PE PE+ +
Sbjct: 186 AHNSLGLALQAKGEKNLAISSFIKALEI---------KPEF-------------PEACYN 223
Query: 137 NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVD 196
L ++E ++ +++ N LG+ G + +I+ L +
Sbjct: 224 LGF-IYLNQGDIETAINYFNKALLLKWNYPEALNNLGIAFKAKGEISPAINSWRKALEIK 282
Query: 197 PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAG 256
+ + NLG Y G++E + F+ ++ +N+P AL N
Sbjct: 283 TDFPEVYYNLGSIYLDQGNIETAINFFKKALILKENYPEALNNL---------------- 326
Query: 257 ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAA 316
G L + ++ A AL P NL Y GD +S + +KA
Sbjct: 327 -----GNSLQEKGELDAAIAAYKKALNHKPSYREAQNNLGCVYRAQGDLENSIRIFKKAL 381
Query: 317 KLEPN 321
L P+
Sbjct: 382 ALHPD 386
>gi|441498019|ref|ZP_20980223.1| TPR repeat protein [Fulvivirga imtechensis AK7]
gi|441438247|gb|ELR71587.1| TPR repeat protein [Fulvivirga imtechensis AK7]
Length = 254
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 102/223 (45%), Gaps = 23/223 (10%)
Query: 64 LVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILL-RCEADIARPEL-LSLV 121
L +V + +P +A +F +GL+ ++ + +A++ +++A ++ E I R + L
Sbjct: 30 LEYVKKSIPDSATVYFRMGLVKAKMRKFEEAIADFDQAWKLDSGNAETLINRGTVKYYLR 89
Query: 122 QIHHAQCLLPESSGDNSLDK---------ELEPEELEEILSKLKESMQSDTRQAVVWNTL 172
++ A+ L + + L+ E+E E+ ++ L + E++ + Q N
Sbjct: 90 RLDDAENDLKRALERSPLEPNAYNALALIEVEREDYDKALDLVNEALNYEPGQPYFLNNR 149
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
G + L GRL + + + + +DPNN N G Y+ SG+ + + Q ++ D
Sbjct: 150 GFVYLLQGRLDKAKADIDRSITIDPNNAWAYRNKGWYYYLSGNYTDAIRLLQRALVLD-- 207
Query: 233 HPAALINYAALLLCKYGSVLAGAGANTGEGAC--LDQASAVNV 273
++ LLL + A GA EG C L +A A NV
Sbjct: 208 ---PYVDRGHLLLAQ-----AQIGAGDIEGGCKSLRKAVANNV 242
>gi|333987248|ref|YP_004519855.1| hypothetical protein MSWAN_1033 [Methanobacterium sp. SWAN-1]
gi|333825392|gb|AEG18054.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 198
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 74/194 (38%), Gaps = 30/194 (15%)
Query: 137 NSLDKE---------LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSIS 187
N LDKE L+ + ++ L ++ D++ +WN GL ++
Sbjct: 9 NKLDKEECIMKGNKYLDEGKFDKALKCFDNGLKIDSKDVRLWNNKGLAFKGLKEFDKALK 68
Query: 188 VLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK 247
L +DP D + + G+ ++ G+ E++ CF+ ++ D + A
Sbjct: 69 CFDKALKMDPEYVDVLQSKGVIFYDRGEYEKALSCFEKVVDLDPEYVKA----------- 117
Query: 248 YGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRS 307
NT +G L A +C AL+ D + +W ++
Sbjct: 118 ---------CNT-KGLVLGTTKKYQEAIKCFDKALELDSQNTDVWYGKGLVLGKAKKYQE 167
Query: 308 SGKCLEKAAKLEPN 321
+ KC +KA +L PN
Sbjct: 168 AIKCFDKALELNPN 181
>gi|17229291|ref|NP_485839.1| hypothetical protein alr1799 [Nostoc sp. PCC 7120]
gi|17130889|dbj|BAB73498.1| alr1799 [Nostoc sp. PCC 7120]
Length = 402
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 21/167 (12%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
E ++ ++++ D R+ + LGL+L + G LQ +I+ + ++P+ + NL I
Sbjct: 168 EGAITAYRQALVIDPRRVEAYYNLGLVLYEQGLLQEAIAAYQDAVNLEPSKINAHHNLAI 227
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
A Q+G ME++ +++++ D + AA Y++L GS++A G A Q
Sbjct: 228 ALQQTGKMEEAIVAYREVLKLDPKNAAA---YSSL-----GSLMAMQGRPEEAIAAYTQ- 278
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 315
A++ DPK A + NL Y G+ + + ++A
Sbjct: 279 ------------AVRQDPKNALAYYNLGITLYNQGELQKASNAFKRA 313
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 72/153 (47%), Gaps = 23/153 (15%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P+ A++ LGL+ G +A+++Y+ A + P S + HH +
Sbjct: 182 PRRVEAYYNLGLVLYEQGLLQEAIAAYQDAVNL---------EP---SKINAHHNLAIAL 229
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+ +G ++EE + +E ++ D + A +++LG ++ GR + +I+ +
Sbjct: 230 QQTG-----------KMEEAIVAYREVLKLDPKNAAAYSSLGSLMAMQGRPEEAIAAYTQ 278
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 224
+ DP N NLGI + G++++++ F+
Sbjct: 279 AVRQDPKNALAYYNLGITLYNQGELQKASNAFK 311
>gi|302338865|ref|YP_003804071.1| hypothetical protein Spirs_2362 [Spirochaeta smaragdinae DSM 11293]
gi|301636050|gb|ADK81477.1| Tetratricopeptide TPR_2 repeat protein [Spirochaeta smaragdinae DSM
11293]
Length = 647
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 23/177 (12%)
Query: 158 SMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDME 217
++QSD V +NTLG + K + ++I ++P N D + LG A +++G +
Sbjct: 255 AIQSDPNLWVPYNTLGKVYSKQRQWNNAIDSYKQAARLNPENADLLFELGKAQYRAGKYD 314
Query: 218 QSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKEC 277
+ + F+ I D H A +N + + G+V A A G+ A +++ S V
Sbjct: 315 DARQSFEAAIHIDPQHEKAYLNL-GVTQRRLGNVNAAINA-FGKAAQINKESDV------ 366
Query: 278 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP--NCMSTRYAVAVS 332
+ L Y GD + + + +KAA L+P N YAVA++
Sbjct: 367 -------------AFYQLGELYKQKGDMKQASENYQKAAALQPDRNIYQGSYAVALT 410
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 121/287 (42%), Gaps = 45/287 (15%)
Query: 65 VHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIH 124
+H+ P++ A+ LG+ +RLG A++++ KA +I E+D+A L +++
Sbjct: 324 IHID---PQHEKAYLNLGVTQRRLGNVNAAINAFGKAAQI--NKESDVA---FYQLGELY 375
Query: 125 HAQCLLPESSGDNSLDKELEPE----------------ELEEILSKLKESMQSDTRQAVV 168
+ + ++S + L+P+ + +E + K ++ +D+ V
Sbjct: 376 KQKGDMKQASENYQKAAALQPDRNIYQGSYAVALTALGKYQEAEAAYKRAIAADSEDPVA 435
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
+ L+ L+ G+ + + + +D ++ + LG+ G+ + + ++ I
Sbjct: 436 RYNIALVQLQLGKDNDAFENAAKAVQLDSSSAVYLYTLGLTSEAVGNSDGAVSAYRASIA 495
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
KD+ + IN G D + A + LLAA DPK+
Sbjct: 496 KDRGYLPPKINL---------------------GKLYDDQGKYDEALDQLLAAYAIDPKS 534
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 335
+ NL N Y ++ S K + A + +PN RY ++++ I+
Sbjct: 535 LEVNNNLGNVYLHKELYQDSIKHYKAAIEKKPNATLMRYNLSLAYIE 581
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E L +L + D + V N LG + L Q SI + + PN NL +
Sbjct: 518 DEALDQLLAAYAIDPKSLEVNNNLGNVYLHKELYQDSIKHYKAAIEKKPNATLMRYNLSL 577
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK 247
AY ++GD + + Q+LI D ++ A LL K
Sbjct: 578 AYIETGDQDDAIASLQELIKVDPSYWDAYYQLGKLLFAK 616
>gi|225460696|ref|XP_002270347.1| PREDICTED: uncharacterized protein LOC100243534 [Vitis vinifera]
Length = 341
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 69/142 (48%)
Query: 95 VSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSK 154
V ++ ++L+R E D++ EL V+ A G L ++ P + +L
Sbjct: 175 VGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATELFELGAVMLRRKFYPAATKFLLQA 234
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
+++ D A V+N LG+ ++ G+L+ I+ + + + P NLG AY +
Sbjct: 235 IEKWDGDDQDLAQVYNALGVSYVRDGKLEKGITQFENAVKLQPGYVTAWNNLGDAYEKKK 294
Query: 215 DMEQSAKCFQDLILKDQNHPAA 236
D++ + K F++++L D N+ A
Sbjct: 295 DLKSALKAFEEVLLFDPNNKVA 316
>gi|432330743|ref|YP_007248886.1| TPR repeat-containing protein [Methanoregula formicicum SMSP]
gi|432137452|gb|AGB02379.1| TPR repeat-containing protein [Methanoregula formicicum SMSP]
Length = 318
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 68/186 (36%), Gaps = 21/186 (11%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E L ++++D A W G L K GR + I +A+DP+N D N G
Sbjct: 31 KEALEAFTRALEADPSFAPAWVGRGFALGKQGRYEEEIECCEKAIALDPHNVDAWNNRGF 90
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
A E+ C + + D + A N G L G + GE +C D+A
Sbjct: 91 ACGMLARFEEKIHCCEQTLALDPENATAWNN--------KGVALGMLGRHEGEVSCCDRA 142
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 328
AV P+ W N A + C ++A K+ P +S
Sbjct: 143 LAVR-------------PRYLSAWVNKGFALGKLKRYEEEIACYDRALKIYPFFLSALVN 189
Query: 329 VAVSRI 334
V+ I
Sbjct: 190 KGVAHI 195
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 81/204 (39%), Gaps = 13/204 (6%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
EE + ++++ D A WN G+ L GR + +S LAV P N G
Sbjct: 98 FEEKIHCCEQTLALDPENATAWNNKGVALGMLGRHEGEVSCCDRALAVRPRYLSAWVNKG 157
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALIN--YAALLLCKYGSVL-----------AG 254
A + E+ C+ + +AL+N A + L +Y + A
Sbjct: 158 FALGKLKRYEEEIACYDRALKIYPFFLSALVNKGVAHIHLKEYRDAIETLDRALSIDPAH 217
Query: 255 AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 314
A A +G L + A L AL+ DP A W L+N+ +LTG S + +
Sbjct: 218 AKALYRKGLTLSLMGRHSEAIPVLEKALEIDPAIADAWVVLSNSCFLTGRLEESARAFDM 277
Query: 315 AAKLEPNCMSTRYAVAVSRIKDAE 338
A ++ + T +S +K+ +
Sbjct: 278 AYYIDVKDVRTGLVKGMSLLKNGK 301
>gi|427707117|ref|YP_007049494.1| hypothetical protein Nos7107_1704 [Nostoc sp. PCC 7107]
gi|427359622|gb|AFY42344.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
7107]
Length = 552
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 44/238 (18%)
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
E +L E ++ ++S+Q D + A+ +N +G +L+ G+L +I+ + DP
Sbjct: 142 EQGKLNESIAAYQKSIQLDPKNALPYNGMGNVLIYQGKLDEAIASYRKAIQFDPKYAVTY 201
Query: 204 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGA 263
NLG+A + ++++ ++ I D KY S G E
Sbjct: 202 HNLGLALYNQKKLDEALAAYKKAIQID---------------PKYTSAYVSLGLALSEQG 246
Query: 264 CLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL----- 318
LD+A A L A P H A H + G L++ KL
Sbjct: 247 KLDEAMAKYRQALSLPEDKSATPTTVHTLA-----------HNNLGFALQRQGKLKEAIE 295
Query: 319 ---EPNCMSTRYAVAVSRIKDAER----SQEPTEQLSWAGNEMASILREGDPVQIEPP 369
+ + + + A + +K+AER + P E+ +ASILR + IE P
Sbjct: 296 EYKQAISIDSNFVTAQTNLKEAERLLALQRNPQEE------SLASILRSVVRINIEIP 347
>gi|339501296|ref|YP_004699331.1| hypothetical protein Spica_2727 [Spirochaeta caldaria DSM 7334]
gi|338835645|gb|AEJ20823.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta
caldaria DSM 7334]
Length = 1004
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 92/211 (43%), Gaps = 26/211 (12%)
Query: 32 ALEFGVDADGDQSGLGTSSSSREEKVSSLKTGLVHVARKM---PKNAHAHFLLGLMYQRL 88
ALE ++ D + L + + +++S+ K + A+ + P+ A+ LG MY RL
Sbjct: 96 ALERAIELDPTRPELYYNLGNVYKQLSNYKAASMAYAKVIELDPRYVPAYNNLGTMYDRL 155
Query: 89 GQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEEL 148
+ KA + ++K D P L H L ES G +
Sbjct: 156 QESEKAFAIFQKG------LSLDRNNPVL------HFNYGLALESKG-----------KF 192
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E + + + +++S N LG++ LK GR ++ + + +L++DP N + N+G+
Sbjct: 193 DEAVREYEAALRSRPGWVEALNNLGILRLKQGRHSDALEIFNRILSIDPFNAEARNNIGV 252
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALIN 239
+ G + ++ I D + A++N
Sbjct: 253 VFADQGKFNDAITNYRQAIEVDPKYVKAVVN 283
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 75/374 (20%), Positives = 130/374 (34%), Gaps = 77/374 (20%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E+L + L L+ +++ D + ++ LG + + +++ + ++ +DP N
Sbjct: 88 EDLNKALDALERAIELDPTRPELYYNLGNVYKQLSNYKAASMAYAKVIELDPRYVPAYNN 147
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK------------------ 247
LG Y + + E++ FQ + D+N+P NY L K
Sbjct: 148 LGTMYDRLQESEKAFAIFQKGLSLDRNNPVLHFNYGLALESKGKFDEAVREYEAALRSRP 207
Query: 248 -------------------------YGSVLA----GAGANTGEGACLDQASAVNVAKECL 278
+ +L+ A A G N A
Sbjct: 208 GWVEALNNLGILRLKQGRHSDALEIFNRILSIDPFNAEARNNIGVVFADQGKFNDAITNY 267
Query: 279 LAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAE 338
A++ DPK NL +A G + LEK KL PN R + +K +
Sbjct: 268 RQAIEVDPKYVKAVVNLEHALESIGHQGDALIELEKLVKLVPNSTEVRINLGALYLK-LQ 326
Query: 339 RSQEPTEQ----LSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEEN 394
R E EQ L W + + ++ +G A + A+ K E A FE
Sbjct: 327 RYPEALEQATRALEWDPDNLQALRIQG-----------AAYRAIGK-DAEAQACFE---- 370
Query: 395 ELSKMEECAGAGESAFLD------QASAVNVAKECLLAALKADPKAAHIWANLANAYYLT 448
++ S +LD Q A+E +LA L+ P+ + L Y T
Sbjct: 371 ---RILAIEPGNYSFYLDLADLHFQRKEYREAEERILAFLRRKPQDRNAKMMLGRLYVET 427
Query: 449 GDHRSSGKCLEKVL 462
G+ + E+++
Sbjct: 428 GNKAHAITIFEELI 441
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 67/184 (36%), Gaps = 25/184 (13%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E L K S + R+A++ LG KSG+ ++ V SLL +P++ + + N+ +
Sbjct: 26 ERLLKYYLSKNKNDREALLL--LGSTYAKSGKYDEALDVFHSLLGSNPDDLEALNNIAVI 83
Query: 210 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 269
Y + D+ ++ + I D P N G Q S
Sbjct: 84 YRKKEDLNKALDALERAIELDPTRPELYYNL---------------------GNVYKQLS 122
Query: 270 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN--CMSTRY 327
A ++ DP+ + NL Y + + +K L+ N + Y
Sbjct: 123 NYKAASMAYAKVIELDPRYVPAYNNLGTMYDRLQESEKAFAIFQKGLSLDRNNPVLHFNY 182
Query: 328 AVAV 331
+A+
Sbjct: 183 GLAL 186
>gi|425460197|ref|ZP_18839679.1| Similar to tr|Q96301|Q96301 [Microcystis aeruginosa PCC 9808]
gi|389827192|emb|CCI21792.1| Similar to tr|Q96301|Q96301 [Microcystis aeruginosa PCC 9808]
Length = 1271
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 116/303 (38%), Gaps = 46/303 (15%)
Query: 56 KVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARP 115
++ S K + + P A ++ LG + + GQ +A+S Y++A + ++P
Sbjct: 1013 ELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLQEAISYYQQAIQ---------SQP 1063
Query: 116 ELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLI 175
+ P + + L E + EE E+ ++ S+Q D+ V+ +L +
Sbjct: 1064 DY-------------PTAFYNLGLVYE-QLEETEKAIACYSHSVQLDSTNVEVYKSLAQL 1109
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
+ + L + P+N + NLG+ ++ +++ CFQ +I Q P
Sbjct: 1110 YDRQENYAKAEKYYRCALLLQPDNLELRYNLGVVLYEQKKFDKAVSCFQKII---QAKPQ 1166
Query: 236 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 295
I Y L G Q + AK C A++ DP A + NL
Sbjct: 1167 DAIAYLHL------------------GISYKQQKLLTKAKSCFEKAIELDPDYAMAYYNL 1208
Query: 296 ANAYYLTGDHRSSGKCLEKAAKLEP--NCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNE 353
Y D + + C +A + +P T A+S IK+ + W N+
Sbjct: 1209 GVVYSCQPDEKKAVDCFRQALRCDPANKLAHTALLFALSGIKEVSSEEIYDASSRWYRNK 1268
Query: 354 MAS 356
+ +
Sbjct: 1269 IQT 1271
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 62/166 (37%), Gaps = 21/166 (12%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
A ++ LG +G L+S+ + + VDP NLG Q G ++++ +Q
Sbjct: 998 AAYYHQLGREKTLTGELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLQEAISYYQQ 1057
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 285
I ++P A N G +Q A C +++ D
Sbjct: 1058 AIQSQPDYPTAFYNL---------------------GLVYEQLEETEKAIACYSHSVQLD 1096
Query: 286 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 331
++ +LA Y ++ + K A L+P+ + RY + V
Sbjct: 1097 STNVEVYKSLAQLYDRQENYAKAEKYYRCALLLQPDNLELRYNLGV 1142
>gi|158521101|ref|YP_001528971.1| hypothetical protein Dole_1087 [Desulfococcus oleovorans Hxd3]
gi|158509927|gb|ABW66894.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
Hxd3]
Length = 808
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 23/193 (11%)
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
L+++++ +QA N+LG +LLK G+ + + +++DP NLG +G
Sbjct: 63 LRKAVEKAPKQAAFHNSLGQVLLKKGQTDEAAAAFQRAVSLDPGLAQAHFNLGKISKAAG 122
Query: 215 DMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 274
+++ F+ + +H AA N G++L AG N G AC +
Sbjct: 123 RADEAKTFFEKTLNLAPHHLAARNN--------LGNLLQQAGDNDGALACFE-------- 166
Query: 275 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRI 334
A LK +P+ A N+ N + L + + + E+A P + + ++RI
Sbjct: 167 -----AVLKINPRQAEAHYNIGNIHKLREEVEPAARYYEQAIACNPGFVPPY--IGLARI 219
Query: 335 KDAERSQEPTEQL 347
A R + E L
Sbjct: 220 HLANRRNDLAESL 232
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 72/173 (41%), Gaps = 23/173 (13%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P+ A AH+ +G +++ + A YE+A + C P + L +IH A
Sbjct: 173 PRQAEAHYNIGNIHKLREEVEPAARYYEQA----IACNPGFV-PPYIGLARIHLA----- 222
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+ N L + L ++++++ D + + L + L+ GR++ ++ V +
Sbjct: 223 --NRRNDLAESL-----------IRKALRMDPKNGEALSELANLYLREGRIEEAVPVFLA 269
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
+ V P + G L AY G Q+ F+ + D + +Y LL
Sbjct: 270 AIRVSPEKAELHGALATAYSIRGATSQAMASFEKALELDPDSARTRFSYGNLL 322
>gi|326430017|gb|EGD75587.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818]
Length = 826
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 27/168 (16%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVD--------PNNCDCIGNLGIAYFQSGDME 217
A ++++LG+ K+G +I LA+ P+ GN G+ Y Q G+ +
Sbjct: 317 AGLYDSLGIAYTKTGEYDKAIEHFEKALAIKVEVLGEKHPSTAHTYGNFGLPYLQKGEND 376
Query: 218 QSAKCFQ-DLILK----DQNHPAALINYAALLLCKYGSVLAGAGANTGE-GACLDQ-ASA 270
Q+ K F+ L +K + HP + Y + + GA N E G ++Q A
Sbjct: 377 QAIKYFERSLAIKAETLGERHPDTALVY---------NNIGGAYENKAEYGKAIEQFQKA 427
Query: 271 VNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 318
+ V E L + P A + NL NAYY G H + + EKA ++
Sbjct: 428 LAVKVETLG---EKHPSTAQTYGNLGNAYYKQGKHDMAIEHAEKALQV 472
>gi|218438344|ref|YP_002376673.1| hypothetical protein PCC7424_1361 [Cyanothece sp. PCC 7424]
gi|218171072|gb|ACK69805.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
Length = 1276
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 84/210 (40%), Gaps = 14/210 (6%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E L ++++ ++ +A WN G+ LL G+ + ++S L ++PN + + N G
Sbjct: 69 QEALQSFNKALELNSNEANAWNYRGVALLHLGKYEEALSTFDKALELNPNYAEALSNRGF 128
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVLA-----------GA 255
+ +++ F + + N+ AL N L L +Y A
Sbjct: 129 VLGKLERYQEALPTFDKALELNPNYAEALFNRGVALERLERYQEAFQSYDKALELNPNNA 188
Query: 256 GANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 315
A G L + A AL+ +P A +W N A ++ + + EKA
Sbjct: 189 VAWNYRGVALGKLERYQEALPTFDKALELNPNNAEVWFNRGVALVNLERYQEALQSYEKA 248
Query: 316 AKLEPNCMSTRYAVAVSRIKDAERSQEPTE 345
KL PN V+ ++ ER QE E
Sbjct: 249 LKLNPNYGEAWNYRGVA-LESLERYQEALE 277
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 140/406 (34%), Gaps = 75/406 (18%)
Query: 2 SKEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLK 61
S E + G + LGK +S+ D ALE + S G E +L
Sbjct: 83 SNEANAWNYRGVALLHLGKYEEALST-FDKALELNPNYAEALSNRGFVLGKLERYQEALP 141
Query: 62 TGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLV 121
T P A A F G+ +RL + +A SY+KA E L A ++L
Sbjct: 142 T-FDKALELNPNYAEALFNRGVALERLERYQEAFQSYDKALE-LNPNNAVAWNYRGVALG 199
Query: 122 QIHHAQCLLPESSGDNSLDK--ELEP----------------EELEEILSKLKESMQSDT 163
++ Q LP + DK EL P E +E L +++++ +
Sbjct: 200 KLERYQEALP------TFDKALELNPNNAEVWFNRGVALVNLERYQEALQSYEKALKLNP 253
Query: 164 RQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAY---------FQS- 213
WN G+ L R Q ++ ++PNN + N G+A FQS
Sbjct: 254 NYGEAWNYRGVALESLERYQEALEAFDKARELNPNNAESWNNRGVALEKLERYQEAFQSY 313
Query: 214 ---------------------GDMEQSAKCFQ--DLILKDQNHPAALINYAALLLC---K 247
G +E+ + FQ D +K + A NY L L +
Sbjct: 314 DQAIQLNLNDAQAWYNRGFPLGKLERYEEAFQSFDQAIKLNPNYAEAWNYRGLALGNLER 373
Query: 248 YGSVLAG-----------AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 296
Y A A +G L A + A+K +P A W N
Sbjct: 374 YEEAFQSYDQAIKLNPNYAEAWYNQGVALGMLERYEEAFQFYDQAIKLNPNHAQAWNNRG 433
Query: 297 NAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQE 342
A + + + +KA KL PN Y V+ + ER QE
Sbjct: 434 VALGNLERYEEAFQSFDKAIKLNPNHAEAWYNQGVA-LGKLERYQE 478
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 81/213 (38%), Gaps = 20/213 (9%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E EE ++++ + A W G+ L R + + + ++PN+ N
Sbjct: 372 ERYEEAFQSYDQAIKLNPNYAEAWYNQGVALGMLERYEEAFQFYDQAIKLNPNHAQAWNN 431
Query: 206 LGIAYFQSGDMEQSAKCFQDL---ILKDQNHPAALINYAALL--LCKYGSVLAG------ 254
G+A G++E+ + FQ I + NH A N L L +Y L
Sbjct: 432 RGVAL---GNLERYEEAFQSFDKAIKLNPNHAEAWYNQGVALGKLERYQEALQSYDQAIK 488
Query: 255 -----AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 309
A A +G L + A + A+K +P A W N A ++ +
Sbjct: 489 LNPNYAEAWYNQGVALGKLERYQEALQSYDQAIKLNPNYAEAWYNRGFALGNLECYQEAF 548
Query: 310 KCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQE 342
+ +KA +L PN S +++ ER QE
Sbjct: 549 QSFDKAIQLNPNDAEAWNNRGFS-LRNLERYQE 580
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 92/235 (39%), Gaps = 33/235 (14%)
Query: 140 DKE-LEP--EELEEILSKLKESMQSDTRQAVV----------------WNTLGLILLKSG 180
D+E EP EE+E +L++ ++ + QA + WN G++L G
Sbjct: 7 DREATEPVNEEIEALLNQGRDHFNAQNYQAALDALEQVLTLEPNKVEAWNGQGVVLFNLG 66
Query: 181 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 240
+ Q ++ + L ++ N + G+A G E++ F + + N+ AL N
Sbjct: 67 KHQEALQSFNKALELNSNEANAWNYRGVALLHLGKYEEALSTFDKALELNPNYAEALSNR 126
Query: 241 AALL--LCKYGSVLAG-----------AGANTGEGACLDQASAVNVAKECLLAALKADPK 287
+L L +Y L A A G L++ A + AL+ +P
Sbjct: 127 GFVLGKLERYQEALPTFDKALELNPNYAEALFNRGVALERLERYQEAFQSYDKALELNPN 186
Query: 288 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQE 342
A W A ++ + +KA +L PN + V+ + + ER QE
Sbjct: 187 NAVAWNYRGVALGKLERYQEALPTFDKALELNPNNAEVWFNRGVALV-NLERYQE 240
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 71/195 (36%), Gaps = 13/195 (6%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E EE ++++ + A WN GL L R + + + ++PN + N
Sbjct: 338 ERYEEAFQSFDQAIKLNPNYAEAWNYRGLALGNLERYEEAFQSYDQAIKLNPNYAEAWYN 397
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVLAG--------- 254
G+A E++ + + I + NH A N L L +Y
Sbjct: 398 QGVALGMLERYEEAFQFYDQAIKLNPNHAQAWNNRGVALGNLERYEEAFQSFDKAIKLNP 457
Query: 255 --AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 312
A A +G L + A + A+K +P A W N A ++ + +
Sbjct: 458 NHAEAWYNQGVALGKLERYQEALQSYDQAIKLNPNYAEAWYNQGVALGKLERYQEALQSY 517
Query: 313 EKAAKLEPNCMSTRY 327
++A KL PN Y
Sbjct: 518 DQAIKLNPNYAEAWY 532
>gi|51244947|ref|YP_064831.1| hypothetical protein DP1095 [Desulfotalea psychrophila LSv54]
gi|50875984|emb|CAG35824.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
Length = 209
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 85/187 (45%), Gaps = 21/187 (11%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E+L +I+++L++ + + + LGL+ +K+GR+ +I+ L L +D + + + N
Sbjct: 7 EDLSQIIAELEKKCGQNPNSVMAVHHLGLVYMKAGRVDEAITCLEKALEIDDLSHESMIN 66
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
LG YF G++ ++ + + I S A A+ G
Sbjct: 67 LGAIYFGQGNVAKAQELNERAI---------------------ASQPESAQAHANLGLIW 105
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
Q + ++ A A++ DPK +W NLA+ + G+ + + +KA ++P+
Sbjct: 106 QQQNELDKALASYEKAVQYDPKLITVWLNLASVLTMKGEDDRAVESSQKAIDIDPDSPLA 165
Query: 326 RYAVAVS 332
+AV+
Sbjct: 166 HNNMAVA 172
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 71/158 (44%), Gaps = 22/158 (13%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P + A LGL+Y + G+ +A++ EKA EI D++ +++L I+ Q +
Sbjct: 24 PNSVMAVHHLGLVYMKAGRVDEAITCLEKALEI-----DDLSHESMINLGAIYFGQGNVA 78
Query: 132 ESSGDNSLDKELEPE----------------ELEEILSKLKESMQSDTRQAVVWNTLGLI 175
++ N +PE EL++ L+ ++++Q D + VW L +
Sbjct: 79 KAQELNERAIASQPESAQAHANLGLIWQQQNELDKALASYEKAVQYDPKLITVWLNLASV 138
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA-YFQ 212
L G ++ + +DP++ N+ +A YF+
Sbjct: 139 LTMKGEDDRAVESSQKAIDIDPDSPLAHNNMAVALYFK 176
>gi|405355263|ref|ZP_11024489.1| TPR repeat-containing protein [Chondromyces apiculatus DSM 436]
gi|397091605|gb|EJJ22407.1| TPR repeat-containing protein [Myxococcus sp. (contaminant ex DSM
436)]
Length = 639
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 116/297 (39%), Gaps = 34/297 (11%)
Query: 61 KTGLVHVAR--KMPKNAHAHFLLGLMYQRLGQPLKAVSSYEK---------------AEE 103
+T V AR P +A A + LG + L P KAV+ +K A
Sbjct: 26 RTAAVESARLESSPDDADALYRLGTAFLALNTPKKAVAPLKKLVAQEPDLIPPKLALARA 85
Query: 104 ILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDT 163
+ L E + AR L + + + + L G L + L+ E + +S+ + +
Sbjct: 86 LRLSGEPEQARTVLDTAIAAYPDEATLRAERG--LLARVLD--ERDVAISQYAVAAELSP 141
Query: 164 RQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 223
+ A + LG L ++ R +I L +D NLG A + G ++ +
Sbjct: 142 QDAELRFNLGEALQRANRTDDAIEAYREALKLDAKLNVARVNLGKALAEKGLNGEAKETL 201
Query: 224 QDLILKDQNHPAALINYAALLL---------CKYGSVLAG----AGANTGEGACLDQASA 270
++ + A N LL+ +Y LA A A+ G L++
Sbjct: 202 REATRQKLGDTEAHYNLGVLLMRENDLDGAIAEYQRTLAADPKHAWAHNNLGVALNEKGD 261
Query: 271 VNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 327
A E L A+ ADPK A NL AYY GD+ + K EKA LEP S Y
Sbjct: 262 PRKATEAFLKAIAADPKFAEAQFNLGLAYYQLGDNVRALKAFEKAVVLEPRRSSGPY 318
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E L K K+ ++DT LG++ + GR +++ L +++A DP + LG
Sbjct: 474 EGLLKPKDGEEADT---AALARLGIVHSRRGRPDQAVTELEAVVAKDPAQLEARAELGFI 530
Query: 210 YFQSGDMEQSAKCFQDLILKDQNHPAALI 238
Y + GD ++ K ++ D HP L+
Sbjct: 531 YLRGGDGAKAKKVLTSVLTVDPGHPLGLL 559
>gi|326498109|dbj|BAJ94917.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 986
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 25/172 (14%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
++K +E++ D + A + + + G + +I + + + PN CD NL AY
Sbjct: 116 IAKNEEALAIDPQFAECYGNMANAWKEKGDIDLAIRYYLTAIQLRPNFCDAWSNLASAYT 175
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAG--AGANTGEGACLDQAS 269
+ G + ++A+C CK VL A++ G +
Sbjct: 176 RKGRLNEAAQC-----------------------CKQALVLNPRLVDAHSNLGNLMKAQG 212
Query: 270 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
V A C L A++ DP A W+NLA + GD + + ++A KL+P+
Sbjct: 213 LVQEAYTCYLEAIRIDPHFAIAWSNLAGLFMEVGDLNKAMQYYKEAVKLKPS 264
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 108/268 (40%), Gaps = 46/268 (17%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL----SLVQIHHAQ 127
P A AH G +Y+ +G +AV+ Y++A + ARP+ +L I++ Q
Sbjct: 263 PSFADAHLNQGNVYKAMGMLQEAVACYQRALQ---------ARPDYAMAYGNLATIYYEQ 313
Query: 128 CLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSIS 187
+L+ + +++ D+R +N +G L +GR++ +I+
Sbjct: 314 ------------------RQLDMAIHCYNQAIICDSRFVEAYNNMGNALKDAGRVEEAIN 355
Query: 188 VLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN-------- 239
S L + N+ + NLG Y + + +A ++ I + L N
Sbjct: 356 CFQSCLVLQANHPQALTNLGNIYMEWNMISTAASFYKAAIAVTSGLSSPLNNLAVIYKQQ 415
Query: 240 --YAALLLCKYGSVL----AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWA 293
YA + C Y VL A A G + V A + + A+ P A A
Sbjct: 416 GSYADAIAC-YTEVLRIDPTAADALVNRGNTFKEFGRVAEAIQDYIQAVTIRPNMAEAHA 474
Query: 294 NLANAYYLTGDHRSSGKCLEKAAKLEPN 321
NLA+AY +G ++ ++A L P+
Sbjct: 475 NLASAYKDSGHQEAAIASYKQALCLRPD 502
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 14/203 (6%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
L+E ++ + ++Q+ A+ + L I + +L +I + + D + N+G
Sbjct: 282 LQEAVACYQRALQARPDYAMAYGNLATIYYEQRQLDMAIHCYNQAIICDSRFVEAYNNMG 341
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL-----LLCKYGSVLAGAGANT-GE 261
A +G +E++ CFQ ++ NHP AL N + ++ S A A T G
Sbjct: 342 NALKDAGRVEEAINCFQSCLVLQANHPQALTNLGNIYMEWNMISTAASFYKAAIAVTSGL 401
Query: 262 GACLD-------QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 314
+ L+ Q + A C L+ DP AA N N + G + + +
Sbjct: 402 SSPLNNLAVIYKQQGSYADAIACYTEVLRIDPTAADALVNRGNTFKEFGRVAEAIQDYIQ 461
Query: 315 AAKLEPNCMSTRYAVAVSRIKDA 337
A + PN M+ +A S KD+
Sbjct: 462 AVTIRPN-MAEAHANLASAYKDS 483
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 110/280 (39%), Gaps = 53/280 (18%)
Query: 178 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL 237
KSG+ ++ +++ +P D + LG YFQ D + I K++ A
Sbjct: 74 KSGKYSQALEHGNAVYEKNPRRTDNLLLLGAIYFQLRDYDLC-------IAKNEEALAID 126
Query: 238 INYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 297
+A YG+ +A A G+ +++A L A++ P W+NLA+
Sbjct: 127 PQFAEC----YGN-MANAWKEKGD---------IDLAIRYYLTAIQLRPNFCDAWSNLAS 172
Query: 298 AYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMAS- 356
AY G + +C ++A L P R+ DA S GN M +
Sbjct: 173 AYTRKGRLNEAAQCCKQALVLNP------------RLVDAH---------SNLGNLMKAQ 211
Query: 357 -ILREG-----DPVQIEP--PIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGA--G 406
+++E + ++I+P IAW+ A + ++ A + + + A A
Sbjct: 212 GLVQEAYTCYLEAIRIDPHFAIAWSNLAGLFMEVGDLNKAMQYYKEAVKLKPSFADAHLN 271
Query: 407 ESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 446
+ + A C AL+A P A + NLA YY
Sbjct: 272 QGNVYKAMGMLQEAVACYQRALQARPDYAMAYGNLATIYY 311
>gi|357633166|ref|ZP_09131044.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
sp. FW1012B]
gi|357581720|gb|EHJ47053.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
sp. FW1012B]
Length = 741
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 75/191 (39%), Gaps = 21/191 (10%)
Query: 153 SKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQ 212
+K KE ++ W+ LGL L+ G +++ L +A PN+ D +LG AY
Sbjct: 146 AKAKEFLERFPESGKGWHLLGLSLVARGDGAAALEPLLRAVATLPNDVDLWDHLGSAYLH 205
Query: 213 SGDMEQSAKCFQDLILKDQNHPA-----------------ALINYAALLLCKYGSVLAGA 255
G EQ+A F+ + ++P+ A+ +Y L C+ +
Sbjct: 206 QGQPEQAANAFRRALALRPDYPSAHNNLGNALRELGQPQEAMASYRQALRCQPNHAM--- 262
Query: 256 GANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 315
A+T G L V A EC AL P N ANA G ++ +A
Sbjct: 263 -AHTNLGIVLQSQGQVQAALECHARALALAPANVEAHVNYANAQKELGHIEAAVAAYGRA 321
Query: 316 AKLEPNCMSTR 326
L+P + R
Sbjct: 322 LALDPERLEAR 332
>gi|124008152|ref|ZP_01692850.1| O-linked GlcNAc transferase [Microscilla marina ATCC 23134]
gi|123986400|gb|EAY26213.1| O-linked GlcNAc transferase [Microscilla marina ATCC 23134]
Length = 425
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 9/178 (5%)
Query: 73 KNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPE 132
K A + LG Y L Q KA+ YEKA +I ++ + + ++I+ E
Sbjct: 198 KFEKAWYNLGATYVDLKQYEKAIPCYEKAIDIKPDFDSWYSLGLTYTDMKIYEKAIYCFE 257
Query: 133 SSGDNSLDKEL---------EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQ 183
+ + + + EL ++ EE + K+S++ + +VW LG+ GR +
Sbjct: 258 KAIEINPETELWYILGVTYSNLQKHEEAIPYYKKSLEINPNNPLVWYNLGITYANLGRDR 317
Query: 184 SSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYA 241
++ + ++P NLGI Y G+ E+S CFQ ++ + N AL N A
Sbjct: 318 DALPCFEKAVGLNPEFDLVWYNLGIIYINLGEYEKSIPCFQRVVEEKPNFDKALYNIA 375
>gi|197120103|ref|YP_002140530.1| hypothetical protein [Geobacter bemidjiensis Bem]
gi|197089463|gb|ACH40734.1| TPR domain protein [Geobacter bemidjiensis Bem]
Length = 589
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 74/178 (41%), Gaps = 21/178 (11%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
EE ++L++ +Q D A W L +++ + G + +L L +P N + LG+
Sbjct: 26 EEARTQLQQLVQEDPGCARGWYLLAVLVGEQGFPDQAAKLLRQALRAEPENVKALNALGV 85
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
A Q G+ +Q A C+ + + D A +N A LL K G LA A A +G L
Sbjct: 86 ALQQMGERDQGAACYGEALRIDSRFQEARVNLA--LLLKEGMRLAEAEALLSQGIAL--- 140
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
+P++ + N AN + G + + +L+P + R
Sbjct: 141 ----------------EPESVRLRYNYANVLHYQGRSLEATGAYREVLRLDPQHLDAR 182
>gi|307718825|ref|YP_003874357.1| hypothetical protein STHERM_c11390 [Spirochaeta thermophila DSM
6192]
gi|306532550|gb|ADN02084.1| hypothetical protein STHERM_c11390 [Spirochaeta thermophila DSM
6192]
Length = 194
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 23/174 (13%)
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
LL+ GR + +I +L ++L +P++ + LG+A+ +SG ++ K + K++ P
Sbjct: 15 LLQQGRYEEAIPLLQNILYEEPDHAGALHRLGVAFTESGRQAEAIKTLSFALKKEEKDPD 74
Query: 236 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 295
Y A TG+ + AKE A++ P A NL
Sbjct: 75 IWEAYGC------------ACYRTGK---------LEEAKEAFEKAVELFPYHASALRNL 113
Query: 296 ANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA--VSRIKDAERSQEPTEQL 347
++ D ++S +CLEK+ ++ P T +A++ +KD ++++E QL
Sbjct: 114 GVTLHVMKDFKASYRCLEKSREINPEDYLTLFALSNVCIHLKDFDQAREVLYQL 167
>gi|150395286|ref|YP_001325753.1| TonB-dependent receptor [Sinorhizobium medicae WSM419]
gi|150026801|gb|ABR58918.1| TonB-dependent receptor [Sinorhizobium medicae WSM419]
Length = 1198
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 21/175 (12%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+LE LS L ++Q+ + +WN LGL+ G +++ + +A+DP + NL
Sbjct: 423 DLEGALSDLNRALQTAPGSSSIWNALGLVQGARGDNRAAEAAFKQAIALDPLDPVSHANL 482
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
I Y M ++ + + D + AL+ G
Sbjct: 483 AIQYLDEMRMAEAKREIDTALSVDPSFDVALV---------------------ARGRYQM 521
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
Q V+ A E LLA A+P ++ LA A+Y GD + + L+ A +L+PN
Sbjct: 522 QNGDVDRAVEDLLAGSTANPAYSNAQLLLAAAHYEKGDRIPAAQALDNADRLDPN 576
>gi|21226280|ref|NP_632202.1| hypothetical protein MM_0178 [Methanosarcina mazei Go1]
gi|20904523|gb|AAM29874.1| conserved protein [Methanosarcina mazei Go1]
Length = 1711
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 92/217 (42%), Gaps = 17/217 (7%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
EE L L++S++ + +W GLILL +G+L+ +I + ++P+N C N+G
Sbjct: 318 FEEALGPLEKSLEKEPENYNLWLQKGLILLDTGKLEPAIDAFENAARLNPDNETCWMNMG 377
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAG------------- 254
A + E++ + F++ L+ + N ++L K G
Sbjct: 378 FALYSLERYEEALEAFKE-GLRLNPYLETGWNRKGIVLGKLGKTGEALEAFEEAIKLRPD 436
Query: 255 -AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
A G L + A+E LK +P+ N + G ++ + LE
Sbjct: 437 FEDAWKNRGLLLFASEECEKAEEAFAEVLKINPEDIDSLYNRGISLLKLGRKETALEYLE 496
Query: 314 KAAKLEPNCMSTRYA--VAVSRIKDAERSQEPTEQLS 348
K L P+ Y+ VA++ + + E++ E E+L+
Sbjct: 497 KVVSLRPDYPDLSYSLGVALTELGEYEKALETFEKLA 533
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 106/275 (38%), Gaps = 51/275 (18%)
Query: 38 DADGDQSGL--GTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAV 95
DAD + +G+ G + +E S+L+T V K P + A + G++ L + +A
Sbjct: 604 DADYEDAGVLKGFAQMKLKECASALET-FERVLEKKPDSDTAWYYRGMILYTLQRQEEAA 662
Query: 96 SSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKL 155
++E A + P L + + + A+CL + + E E +L K
Sbjct: 663 KAFESASRL---------NPGLYTAFE-YRAKCLFETGQYEAAF------EAFEAVLEKD 706
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL-------GI 208
E++ + ++A+ L LK + ++ LS+LL DP D L GI
Sbjct: 707 PENLSALEKRAIC-----LFELKKNK--EAVDALSTLLESDPERKDTKLRLEEAKLRLGI 759
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
YF+ G E + + F+ + N A I K SVL +G +
Sbjct: 760 EYFELGQYENALELFEGI-----NEKAEGIYEKTRDPQKPNSVL------YWKGLVFIRQ 808
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTG 303
A A E DP N A +Y TG
Sbjct: 809 EAYEKAVEAFKGITDQDP-------NFAEGWYFTG 836
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 39/82 (47%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E EE L KE ++ + WN G++L K G+ ++ + + P+ D N
Sbjct: 384 ERYEEALEAFKEGLRLNPYLETGWNRKGIVLGKLGKTGEALEAFEEAIKLRPDFEDAWKN 443
Query: 206 LGIAYFQSGDMEQSAKCFQDLI 227
G+ F S + E++ + F +++
Sbjct: 444 RGLLLFASEECEKAEEAFAEVL 465
>gi|386813343|ref|ZP_10100567.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386402840|dbj|GAB63448.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 411
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 78/189 (41%), Gaps = 25/189 (13%)
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
E SGD+ L ++ + + ++++ D +Q + N G + L+ G + ++
Sbjct: 162 EKSGDDYLRRD----NIGMAFIQYDKALRLDPKQTGIRNKTGHLFLRRGLTEEAMREFEE 217
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 251
++ DP N G+ + G+++ + + F+ + D A
Sbjct: 218 VIKNDPLNAPAYEGKGMVFIARGNLDTAKEYFRQAVQLDSKRWQA--------------- 262
Query: 252 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 311
+T G D+ VA A+K +P A ++ NL +YYL G++ S +
Sbjct: 263 ------HTLLGIIHDRQGEFAVAINEYHNAIKINPNAGILYNNLGMSYYLKGEYEKSVEA 316
Query: 312 LEKAAKLEP 320
L A K+EP
Sbjct: 317 LTTALKIEP 325
>gi|253702411|ref|YP_003023600.1| hypothetical protein GM21_3825 [Geobacter sp. M21]
gi|251777261|gb|ACT19842.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21]
Length = 589
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 72/178 (40%), Gaps = 21/178 (11%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
EE ++L++ +Q D A W L +++ + G + +L L +P N + LG+
Sbjct: 26 EEARTQLQQLVQEDPGCARGWYLLAVLVGEQGHPDQAAKLLRQALRAEPENVKALNALGV 85
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
A Q G+ +Q+A C+ + + D A +N A L K G LA A A G L
Sbjct: 86 ALQQMGERDQAAACYGEALRIDPRFQEARVNLA--LFLKVGMRLAEAEALLSRGIAL--- 140
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
+P + + N AN + G + + +L+P + R
Sbjct: 141 ----------------EPASVRLRYNYANVLHYQGRSLEAAGAYREVLRLDPQHLDAR 182
>gi|427715927|ref|YP_007063921.1| hypothetical protein Cal7507_0597 [Calothrix sp. PCC 7507]
gi|427348363|gb|AFY31087.1| Tetratricopeptide TPR_2 repeat-containing protein [Calothrix sp.
PCC 7507]
Length = 358
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 23/151 (15%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
A V+ LGL L + G+LQ +I+V + +D NN + NL IA G ++++ ++
Sbjct: 154 AAVYYNLGLALYEQGQLQEAIAVYQQAINLDSNNANAYFNLAIALQDQGQIQEAIANYRQ 213
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS-AVNVAKECLLAALKA 284
++ +D + A N GS++A G QAS A++ ++ A+
Sbjct: 214 VLQRDPKNDTAYNN--------IGSLMAIQG----------QASEAISAYQQ----AIDQ 251
Query: 285 DPKAAHIWANLANAYYLTGDHRSSGKCLEKA 315
+PK A + NL Y GD +++ L +A
Sbjct: 252 NPKNASAYYNLGVTLYKQGDIKTASDALNRA 282
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLV---QIHH 125
R P + A++ LGL QR GQ A+++Y ++ +++ A + L+L Q+
Sbjct: 115 RVNPSSGEAYYNLGLALQRQGQKETAITAYRRS--LVINPTAAVYYNLGLALYEQGQLQE 172
Query: 126 A-----QCLLPESSGDNS---LDKELEPE-ELEEILSKLKESMQSDTRQAVVWNTLGLIL 176
A Q + +S+ N+ L L+ + +++E ++ ++ +Q D + +N +G ++
Sbjct: 173 AIAVYQQAINLDSNNANAYFNLAIALQDQGQIQEAIANYRQVLQRDPKNDTAYNNIGSLM 232
Query: 177 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDME 217
G+ +IS + +P N NLG+ ++ GD++
Sbjct: 233 AIQGQASEAISAYQQAIDQNPKNASAYYNLGVTLYKQGDIK 273
>gi|410479980|ref|YP_006767617.1| hypothetical protein LFML04_2469 [Leptospirillum ferriphilum ML-04]
gi|406775232|gb|AFS54657.1| putative TPR domain-containing protein [Leptospirillum ferriphilum
ML-04]
Length = 315
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 153 SKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQ 212
S LKES+ S ++ V+ +T L +G L+ ++ +L+ LL DP N D + LG YF+
Sbjct: 98 SLLKESLTSMEKRDVLLHT-AFSLHGTGELRKAVRMLNELLDEDPLNTDALETLGKIYFE 156
Query: 213 SGDMEQSAKCFQDLILKDQNHP 234
G E++ + F +L D HP
Sbjct: 157 QGHFEEAERYFLELAEMDPAHP 178
>gi|242065108|ref|XP_002453843.1| hypothetical protein SORBIDRAFT_04g019560 [Sorghum bicolor]
gi|241933674|gb|EES06819.1| hypothetical protein SORBIDRAFT_04g019560 [Sorghum bicolor]
Length = 1011
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 16/196 (8%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
+ ++Q+ A+ + L I + G+L +I + + DP + N+G A +G
Sbjct: 315 QRALQARPDYAMAYGNLATIYYEQGQLDMAIRCYNQAIVYDPQFVEAYNNMGNALKDAGR 374
Query: 216 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGA-------GANTGEGACLDQA 268
+E++ C++ + NHP AL N + + ++ + A A +G + L+
Sbjct: 375 VEEAINCYRSCLALQANHPQALTNLGNIYM-EWSMISAAASFYKAAISVTSGLSSPLNNL 433
Query: 269 SAV-----NVAK--ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
+ + N A C L+ DP AA N N + G + + +AA + PN
Sbjct: 434 AVIYKQQGNYADAITCYTEVLRIDPTAADALVNRGNTFKEIGRVNEAIQDYVQAATIRPN 493
Query: 322 CMSTRYAVAVSRIKDA 337
M+ +A S KD+
Sbjct: 494 -MAEAHANLASAYKDS 508
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 21/169 (12%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
++K +E++ D + A + + + G + +I + + + PN CD NL AY
Sbjct: 141 IAKNEEALAIDPQFAECYGNMANAWKEKGDIDLAIRYYLTAIQLRPNFCDAWSNLASAYT 200
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 271
+ G + ++A+C + A IN L A +N G + +
Sbjct: 201 RKGRLNEAAQCCRQ---------ALAIN----------PRLVDAHSNLGN--LMKAQGFI 239
Query: 272 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
A C + AL+ DP A W+NLA + GD + ++A KL+P
Sbjct: 240 QEAYSCYIEALRIDPHFAIAWSNLAGLFMEAGDLDKALMYYKEAVKLKP 288
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 107/292 (36%), Gaps = 65/292 (22%)
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
LG I + I+ LA+DP +C GN+ A+ + GD++ + + + I
Sbjct: 127 LGAIYYQIRNYDMCIAKNEEALAIDPQFAECYGNMANAWKEKGDIDLAIRYYLTAIQLRP 186
Query: 232 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 291
N C S LA A G +N A +C AL +P+
Sbjct: 187 N------------FCDAWSNLASAYTRKGR---------LNEAAQCCRQALAINPRLVDA 225
Query: 292 WANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAG 351
+NL N G + + C +A +++P+ +A+A S + AG
Sbjct: 226 HSNLGNLMKAQGFIQEAYSCYIEALRIDPH-----FAIAWSNLAGL---------FMEAG 271
Query: 352 NEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFL 411
+ +++ + V+++P A A+ + N + G + A +
Sbjct: 272 DLDKALMYYKEAVKLKP---------------SFADAYLNQGNVYKAL----GMPQDAIM 312
Query: 412 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLM 463
C AL+A P A + NLA YY G + +C + ++
Sbjct: 313 -----------CYQRALQARPDYAMAYGNLATIYYEQGQLDMAIRCYNQAIV 353
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 104/288 (36%), Gaps = 86/288 (29%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL----SLVQIHHAQ 127
P A A+ G +Y+ LG P A+ Y++A + ARP+ +L I++ Q
Sbjct: 288 PSFADAYLNQGNVYKALGMPQDAIMCYQRALQ---------ARPDYAMAYGNLATIYYEQ 338
Query: 128 CLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSIS 187
+L+ + +++ D + +N +G L +GR++ +I+
Sbjct: 339 ------------------GQLDMAIRCYNQAIVYDPQFVEAYNNMGNALKDAGRVEEAIN 380
Query: 188 VLSSLLAVDPNNCDCIGNLG----------------------------------IAYFQS 213
S LA+ N+ + NLG + Y Q
Sbjct: 381 CYRSCLALQANHPQALTNLGNIYMEWSMISAAASFYKAAISVTSGLSSPLNNLAVIYKQQ 440
Query: 214 GDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNV 273
G+ + C+ +++ D AL+N G + VN
Sbjct: 441 GNYADAITCYTEVLRIDPTAADALVN---------------------RGNTFKEIGRVNE 479
Query: 274 AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
A + + A P A ANLA+AY +G ++ ++A +L P+
Sbjct: 480 AIQDYVQAATIRPNMAEAHANLASAYKDSGHVETAIVSYKQALRLRPD 527
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 118/321 (36%), Gaps = 43/321 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
W+ L + GRL + LA++P D NLG G ++++ C+ + +
Sbjct: 192 WSNLASAYTRKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYSCYIEALR 251
Query: 229 KDQNHPAALINYAALL---------LCKYGSVL----AGAGANTGEGACLDQASAVNVAK 275
D + A N A L L Y + + A A +G A
Sbjct: 252 IDPHFAIAWSNLAGLFMEAGDLDKALMYYKEAVKLKPSFADAYLNQGNVYKALGMPQDAI 311
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 335
C AL+A P A + NLA YY G + +C +A +P + Y + +K
Sbjct: 312 MCYQRALQARPDYAMAYGNLATIYYEQGQLDMAIRCYNQAIVYDPQFVEA-YNNMGNALK 370
Query: 336 DAERSQEPTEQ----LSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFET 391
DA R +E L+ N ++ G+ + +E + A A+ K V + +
Sbjct: 371 DAGRVEEAINCYRSCLALQANHPQALTNLGN-IYMEWSMISAA-ASFYKAAISVTSGLSS 428
Query: 392 EENELSKMEECAGAGESAF--------LDQASA---------------VNVAKECLLAAL 428
N L+ + + G A +D +A VN A + + A
Sbjct: 429 PLNNLAVIYKQQGNYADAITCYTEVLRIDPTAADALVNRGNTFKEIGRVNEAIQDYVQAA 488
Query: 429 KADPKAAHIWANLANAYYLTG 449
P A ANLA+AY +G
Sbjct: 489 TIRPNMAEAHANLASAYKDSG 509
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 76/187 (40%), Gaps = 22/187 (11%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
++++ + R + LG ++ G +Q + S L +DP+ NL + ++GD
Sbjct: 213 RQALAINPRLVDAHSNLGNLMKAQGFIQEAYSCYIEALRIDPHFAIAWSNLAGLFMEAGD 272
Query: 216 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 275
++++ +++ + + A +N G+V G A
Sbjct: 273 LDKALMYYKEAVKLKPSFADAYLN--------QGNVYKALGMPQD-------------AI 311
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 335
C AL+A P A + NLA YY G + +C +A +P + Y + +K
Sbjct: 312 MCYQRALQARPDYAMAYGNLATIYYEQGQLDMAIRCYNQAIVYDPQFVEA-YNNMGNALK 370
Query: 336 DAERSQE 342
DA R +E
Sbjct: 371 DAGRVEE 377
>gi|225430656|ref|XP_002270163.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC [Vitis vinifera]
gi|296085167|emb|CBI28662.3| unnamed protein product [Vitis vinifera]
Length = 986
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 21/175 (12%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
+ + +++ +E++Q D R A + + + G + +I + + PN CD N
Sbjct: 110 HDFDMCIARNEEALQIDPRFAECYGNMANAWKEKGNVDLAIRYYLIAIELRPNFCDAWSN 169
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
L AY + G + ++A+C + A IN +L A +N G +
Sbjct: 170 LASAYMRKGRLNEAAQCCRQ---------ALAIN----------PLLVDAHSNLGN--FM 208
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
+ A C + AL+ P A W+NLA + +GD + + ++A KL+P
Sbjct: 209 KAQGLIQEAYSCYIEALRIQPSFAIAWSNLAGLFMESGDLTRALQYYKEAVKLKP 263
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 106/270 (39%), Gaps = 50/270 (18%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A A+ LG +Y+ LG P +A+ Y++A + RPE
Sbjct: 263 PTFADAYLNLGNVYKALGMPQEAIVCYQRALQ---------TRPEY-------------- 299
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+ N E +++ + K++++ D+ +N LG L GR+ +I
Sbjct: 300 AMAYGNMAGTYYEQGQMDMAIVHYKQAIECDSGFLEAYNNLGNALKDVGRIDEAIQCYHQ 359
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKC--------------FQDL--ILKDQNHPA 235
LA+ PN+ + NLG Y + + +A F +L I K Q
Sbjct: 360 CLALQPNHPQALTNLGNIYMEWNMVAAAATYYKATLAVTTGLSAPFSNLAIIYKQQG--- 416
Query: 236 ALINYAALLLCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 291
NYA + C Y VL A G + V+ A + + A+ P A
Sbjct: 417 ---NYADAISC-YNEVLRIDPLAADGLVNRGNTFKEIGRVSEAIQDYIHAITIRPTMAEA 472
Query: 292 WANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
ANLA+AY +G ++ K ++A L P+
Sbjct: 473 HANLASAYKDSGHVEAAVKSYKQALVLRPD 502
>gi|225849348|ref|YP_002729512.1| hypothetical protein SULAZ_1547 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643614|gb|ACN98664.1| tetratricopeptide repeat domain protein [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 556
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 96/449 (21%), Positives = 158/449 (35%), Gaps = 53/449 (11%)
Query: 46 LGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEIL 105
L S +EE LK K + + Y + QP KA+S+ E+A +
Sbjct: 73 LAYSLGRKEEAFDILK----KYNEKFKNDPETYLFTAFFYSVIKQPEKAISTLEEAYKRF 128
Query: 106 LRCEADIAR--PELLSLVQIHHAQCLLPESSGDNSLDKE---------LEPEELEEILSK 154
E I+ L QI A+ LL + S D L L++
Sbjct: 129 PNNEKVISTLVDYYLENKQIDKARQLLEKLSTIKKDDPNVYFKLARIYLFENNLQKAEEY 188
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
LK++++ D W LG + + R +I + S+L +P N D + L Y
Sbjct: 189 LKQTLKIDKNFKPAWQILGELYKQQKRYDEAIKLYKSVLQDNPQNLDALNRLFQVYVDID 248
Query: 215 DMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS---VLAGAGANTGE---------- 261
D E ++K +I + AL+ LL KY +L E
Sbjct: 249 DFENASKTIDKIITLNPKDNDALLK-KFLLYIKYDKAKEILEDLQKTVKENPDNLFAKFM 307
Query: 262 -GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
G + + AKE + P + L Y ++ + K P
Sbjct: 308 LGMAYESLNDYKKAKEIYEELYQQQPDNQELVDRLTQVYVNLKEYDKALDVYNKLYTQNP 367
Query: 321 NCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQK 380
N R +A++ I+D GN ++ + +I+P A F ++
Sbjct: 368 N--DYRILLAMADIEDKR------------GNTQRALELVQEAEKIKPDDATVYF--LKA 411
Query: 381 THHEVAAAFETEENELSKMEECAGAGESA-------FLDQASAVNVAKECLLAALKADPK 433
+ + ++ E L K E A ++D+ V+ E + AL P
Sbjct: 412 IYLDKLKNWKEAEKALLKALELRPNYPDALNYLGYTYIDRDINVDKGIELVNKALSLAPD 471
Query: 434 AAHIWANLANAYYLTGDHRSSGKCLEKVL 462
+LA YY GD++ + + LEKVL
Sbjct: 472 NPAYLDSLAWGYYKKGDYKKAYEILEKVL 500
>gi|329850849|ref|ZP_08265694.1| tetratricopeptide repeat family protein [Asticcacaulis biprosthecum
C19]
gi|328841164|gb|EGF90735.1| tetratricopeptide repeat family protein [Asticcacaulis biprosthecum
C19]
Length = 612
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 78/188 (41%), Gaps = 26/188 (13%)
Query: 157 ESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 216
+++ D + A W+ L + K+G L+++I+ + L + P + +LG F+
Sbjct: 98 KALHVDEKSAQAWHVLAIAREKAGDLKTAITCFETALRISPEDAYIANDLGRLAFRLSLN 157
Query: 217 EQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKE 276
+ + K F + NHP A+ N A++L K N +GA E
Sbjct: 158 DLAQKFFLHFLASFPNHPEAMNNLASVLREK----------NDLDGAI-----------E 196
Query: 277 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY-----AVAV 331
L A+ A P+ +W + GD ++G ++A K +P+ Y ++
Sbjct: 197 VLQTAIAAHPEDPQLWNAIGTVVNARGDTETAGVFYQEALKFDPDHCHGNYNYGNVLTSL 256
Query: 332 SRIKDAER 339
R +A R
Sbjct: 257 GRFDEARR 264
>gi|406982243|gb|EKE03586.1| hypothetical protein ACD_20C00180G0001, partial [uncultured
bacterium]
Length = 521
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 100/247 (40%), Gaps = 32/247 (12%)
Query: 159 MQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQ 218
+ D QA + LG++L + RL SI+ ++ ++P+ + NLG + + G+ E+
Sbjct: 35 VNPDYFQAYL--NLGILLAEKERLDDSIACFEKVIQLNPDYAEGYYNLGNSLQEKGEFEK 92
Query: 219 SAKCFQDLILKDQNHPAALINYAALLLCK----------YGSVL----AGAGANTGEGAC 264
+ CFQ + + A N L+L K Y + + G+
Sbjct: 93 AQLCFQKSVELKSDFTEAYNN-LGLILSKQLQFDKAMEYYKKAIDLDPDYCDSYINLGSA 151
Query: 265 LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS 324
L++ A++ AL+ P A + NL ++YL+ D S +C +KA ++P
Sbjct: 152 LNEKGQSEEARKYFHKALEIKPDFAEAYINLGKSFYLSTDLEESEECYQKALLIKPEYAD 211
Query: 325 TRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILRE----GDPVQIEPPIAWAGFAAVQK 380
+ +A+ + + W E L + P +P WAG + K
Sbjct: 212 AYFGLALINLLKGNFDK------GWEYYEYRFSLYDQKFLKKPAFTKP--KWAGESLQNK 263
Query: 381 T---HHE 384
T HHE
Sbjct: 264 TILIHHE 270
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 137 NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVD 196
NSL ++ E E+ + K E ++SD +A +N LGLIL K + ++ + +D
Sbjct: 82 NSLQEKGEFEKAQLCFQKSVE-LKSDFTEA--YNNLGLILSKQLQFDKAMEYYKKAIDLD 138
Query: 197 PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 239
P+ CD NLG A + G E++ K F + + A IN
Sbjct: 139 PDYCDSYINLGSALNEKGQSEEARKYFHKALEIKPDFAEAYIN 181
>gi|424866627|ref|ZP_18290459.1| Putative TPR-domain containing protein [Leptospirillum sp. Group II
'C75']
gi|124516587|gb|EAY58095.1| putative TPR-domain containing protein [Leptospirillum rubarum]
gi|387222716|gb|EIJ77135.1| Putative TPR-domain containing protein [Leptospirillum sp. Group II
'C75']
Length = 327
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 153 SKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQ 212
S LKES+ S ++ V+ +T L +G L+ ++ +L+ LL DP N D + LG YF+
Sbjct: 110 SLLKESLTSMEKRDVLLHT-AFSLHGTGELRKAVRMLNELLDEDPLNTDALETLGKIYFE 168
Query: 213 SGDMEQSAKCFQDLILKDQNHP 234
G E++ + F +L D HP
Sbjct: 169 QGHFEEAERYFLELAEMDPAHP 190
>gi|150400257|ref|YP_001324024.1| hypothetical protein Mevan_1518 [Methanococcus vannielii SB]
gi|150012960|gb|ABR55412.1| TPR repeat-containing protein [Methanococcus vannielii SB]
Length = 375
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/261 (19%), Positives = 94/261 (36%), Gaps = 39/261 (14%)
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
LG YF GD E++ KCF+ + ++N A G+G C
Sbjct: 132 LGYLYFDEGDYEKALKCFEKALTLNKNFEYAW---------------------NGKGLCY 170
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
++ ++A +C A +P+ W N+ Y+ ++ S C EKA ++ N
Sbjct: 171 EKKGKNDLAFKCFEKATFINPEYFDAWYNMGILSYIDQNYVFSLHCFEKAITIDDNNSKN 230
Query: 326 RYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEP--PIAW--AGFAAVQKT 381
+ A E L+ G ++ V++EP W G+
Sbjct: 231 YFYAA--------------ESLTSLGKYREAVFYFEKAVELEPNNSTFWNSKGYTHASLK 276
Query: 382 HHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANL 441
+ A + +S ++ + + + A EC +L+ + + W L
Sbjct: 277 EYSTAKLCYEKSVGISPKDDISWSNLGYMNNNLEQCEEAVECFKKSLELNVNNKNAWNGL 336
Query: 442 ANAYYLTGDHRSSGKCLEKVL 462
N+Y L + + KC + +
Sbjct: 337 GNSYALLNNSEKALKCYDNAI 357
>gi|4028023|gb|AAC96110.1| unknown [Desulfotomaculum thermocisternum]
Length = 224
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 21/146 (14%)
Query: 159 MQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQ 218
+QS+ A LG++L++ GRL+ + ++ +A + NLG YF+ G++E+
Sbjct: 18 LQSNPGCATAKYNLGVMLMEQGRLEEAKTLFEEAIADGTRMFEAYVNLGYIYFKQGNLEK 77
Query: 219 SAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECL 278
+C + L Q P YA L G Q + A E L
Sbjct: 78 VEECNR---LAVQIEPRYARGYANL------------------GFVYLQMEKPDEAIEVL 116
Query: 279 LAALKADPKAAHIWANLANAYYLTGD 304
A++ +P+ W NLANAY GD
Sbjct: 117 QKAIELNPRIIQAWCNLANAYLQKGD 142
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 69/176 (39%), Gaps = 21/176 (11%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
+E LEE + +E++ TR + LG I K G L+ + ++P
Sbjct: 36 MEQGRLEEAKTLFEEAIADGTRMFEAYVNLGYIYFKQGNLEKVEECNRLAVQIEPRYARG 95
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 262
NLG Y Q +++ + Q I + A N LA A G+
Sbjct: 96 YANLGFVYLQMEKPDEAIEVLQKAIELNPRIIQAWCN------------LANAYLQKGD- 142
Query: 263 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 318
LD+A N L L+ P + NLA YYL GD + + L++A +L
Sbjct: 143 --LDRALETN------LKMLEIAPDFSLGHNNLAYVYYLKGDMNRAAEHLKQALEL 190
>gi|222423063|dbj|BAH19513.1| AT3G04240 [Arabidopsis thaliana]
Length = 750
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 109/264 (41%), Gaps = 38/264 (14%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A+ LG +Y+ LG+P +A+ Y+ A + +R + +A + S+
Sbjct: 254 PAFPDAYLNLGNVYKALGRPTEAIMCYQHA--LQMRPNSAMAFGNIASIY---------- 301
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
E +L+ + K+++ D R +N LG L GR+ ++ +
Sbjct: 302 -----------YEQGQLDLAIRHYKQALSRDPRFLEAYNNLGNALKDIGRVDEAVRCYNQ 350
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALI-----NYA 241
LA+ PN+ + NLG Y + M ++ F+ + L + A+I NY+
Sbjct: 351 CLALQPNHPQAMANLGNIYMEWNMMGPASSLFKATLAVTTGLSAPFNNLAIIYKQQGNYS 410
Query: 242 ALLLCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 297
+ C Y VL A A G + V A + + A+ P A ANLA+
Sbjct: 411 DAISC-YNEVLRIDPLAADALVNRGNTYKEIGRVTEAIQDYMHAINFRPTMAEAHANLAS 469
Query: 298 AYYLTGDHRSSGKCLEKAAKLEPN 321
AY +G ++ ++A L P+
Sbjct: 470 AYKDSGHVEAAITSYKQALLLRPD 493
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 74/175 (42%), Gaps = 21/175 (12%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
+E + +++ +E+++ + A + + + G +I + + PN D N
Sbjct: 101 QEYDMCIARNEEALRIQPQFAECYGNMANAWKEKGDTDRAIRYYLIAIELRPNFADAWSN 160
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
L AY + G + ++ +C Q AL L +L A +N G +
Sbjct: 161 LASAYMRKGRLSEATQCCQQ----------------ALSL---NPLLVDAHSNLGN--LM 199
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
++ A C L A++ P A W+NLA + +GD + + ++A KL+P
Sbjct: 200 KAQGLIHEAYSCYLEAVRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKP 254
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 75/195 (38%), Gaps = 14/195 (7%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
+ ++Q A+ + + I + G+L +I L+ DP + NLG A G
Sbjct: 281 QHALQMRPNSAMAFGNIASIYYEQGQLDLAIRHYKQALSRDPRFLEAYNNLGNALKDIGR 340
Query: 216 MEQSAKCFQDLILKDQNHPAALINYAAL-----LLCKYGSVL-AGAGANTGEGACLD--- 266
++++ +C+ + NHP A+ N + ++ S+ A TG A +
Sbjct: 341 VDEAVRCYNQCLALQPNHPQAMANLGNIYMEWNMMGPASSLFKATLAVTTGLSAPFNNLA 400
Query: 267 ----QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
Q + A C L+ DP AA N N Y G + + A P
Sbjct: 401 IIYKQQGNYSDAISCYNEVLRIDPLAADALVNRGNTYKEIGRVTEAIQDYMHAINFRPT- 459
Query: 323 MSTRYAVAVSRIKDA 337
M+ +A S KD+
Sbjct: 460 MAEAHANLASAYKDS 474
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 65/174 (37%), Gaps = 21/174 (12%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
+ E S E+++ A+ W+ L + ++SG L ++ + + P D NLG
Sbjct: 205 IHEAYSCYLEAVRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPAFPDAYLNLG 264
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 267
Y G ++ C+Q + N A N A++ +
Sbjct: 265 NVYKALGRPTEAIMCYQHALQMRPNSAMAFGNIASIYY---------------------E 303
Query: 268 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
+++A AL DP+ + NL NA G + +C + L+PN
Sbjct: 304 QGQLDLAIRHYKQALSRDPRFLEAYNNLGNALKDIGRVDEAVRCYNQCLALQPN 357
>gi|118401580|ref|XP_001033110.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89287457|gb|EAR85447.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 3068
Score = 52.0 bits (123), Expect = 6e-04, Method: Composition-based stats.
Identities = 43/202 (21%), Positives = 89/202 (44%), Gaps = 16/202 (7%)
Query: 135 GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLA 194
G L+++ E ++E L +++Q D +LG + K G L+++I +
Sbjct: 2549 GQIYLEQDKEENSIQEAFQYLTDAIQLDENNYECLISLGKLYDKQGELENAIKFTELAIQ 2608
Query: 195 VDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLC-------- 246
+N + + LG Y ++ ++ +S +CF+ ++ ++ H +LI YA +L
Sbjct: 2609 RPEHNINSMYYLGTLYLKNKEITKSGECFKKVLQQNSEHIPSLIEYATILSLKGEFEKSK 2668
Query: 247 KYGSVLAGAGANT-------GEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 299
KY + N G+ L++ + +N A +C + +PK + L AY
Sbjct: 2669 KYFKIALSKDPNNLICNLRLGK-IYLNKLNNINRAIDCFKQIISIEPKYSKAHFQLGMAY 2727
Query: 300 YLTGDHRSSGKCLEKAAKLEPN 321
D + + +C ++ + PN
Sbjct: 2728 QSRKDFKLAAECFKQCISINPN 2749
>gi|45357839|ref|NP_987396.1| hypothetical protein MMP0276 [Methanococcus maripaludis S2]
gi|45047399|emb|CAF29832.1| Conserved hypothetical protein [Methanococcus maripaludis S2]
Length = 344
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 78/216 (36%), Gaps = 47/216 (21%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
L +S+ D+ + W G+ L R +I ++++ N D N G F
Sbjct: 113 LEMYDKSLNIDSENSEAWKNKGITLNNMQRYSEAIDCFDKSISINAKNSDVWYNKGETQF 172
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALI----------NYAALLLC--------------- 246
+ G+ E+S + +L D+ AL+ NY + + C
Sbjct: 173 KLGEYEKSIDSYNKALLIDEKMETALLGKGNSYLKLQNYESAIECFNTAETINPKSEYPP 232
Query: 247 ------------------KYGSVLAGAGANT----GEGACLDQASAVNVAKECLLAALKA 284
Y L +N+ +G CLD+ + A A++
Sbjct: 233 YYKADAYRDTENFEYALKYYDEALEINPSNSDILISKGICLDKMKNYSAAISNFDLAIQL 292
Query: 285 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
DPK IW N+Y D+ SS C +KA ++EP
Sbjct: 293 DPKNVQIWILKGNSYVGLKDYESSISCYKKALEIEP 328
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 60/313 (19%), Positives = 112/313 (35%), Gaps = 31/313 (9%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
+S+ ++ + + A +W G LLK G S L +DP N + LG
Sbjct: 45 ISEYNLALLENPKSAEIWVNKGNSLLKLGIYGESTECFDKALLIDPENSEAFNGLGTVLS 104
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 271
++G+ +++ + + + D + A N +G L+
Sbjct: 105 KTGNYQKALEMYDKSLNIDSENSEAWKN---------------------KGITLNNMQRY 143
Query: 272 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 331
+ A +C ++ + K + +W N + G++ S KA ++ +
Sbjct: 144 SEAIDCFDKSISINAKNSDVWYNKGETQFKLGEYEKSIDSYNKALLIDEKMETALLGKGN 203
Query: 332 SRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFET 391
S +K + + E + A +P PP A A + E A +
Sbjct: 204 SYLK-LQNYESAIECFNTA--------ETINPKSEYPPYYKAD-AYRDTENFEYALKYYD 253
Query: 392 EENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDH 451
E E++ + LD+ + A A++ DPK IW N+Y D+
Sbjct: 254 EALEINPSNSDILISKGICLDKMKNYSAAISNFDLAIQLDPKNVQIWILKGNSYVGLKDY 313
Query: 452 RSSGKCLEKVLMV 464
SS C +K L +
Sbjct: 314 ESSISCYKKALEI 326
>gi|313202444|ref|YP_004041102.1| hypothetical protein MPQ_2726 [Methylovorus sp. MP688]
gi|312441760|gb|ADQ85866.1| TPR repeat-containing protein [Methylovorus sp. MP688]
Length = 552
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
++ E LSK S+ + Q W +G I L++ + Q + + +L +DP+N D I
Sbjct: 23 QDYFEALSKYTASLSLEGNQVPTWVRIGKIFLRTMKYQQARETMEFVLGMDPHNVDAIYG 82
Query: 206 LGIAYFQSGDMEQSAKCFQD 225
L I+YF G +E+ A+ F D
Sbjct: 83 LAISYFYLGKLEE-ARAFID 101
>gi|269925204|ref|YP_003321827.1| hypothetical protein Tter_0083 [Thermobaculum terrenum ATCC BAA-798]
gi|269788864|gb|ACZ41005.1| Tetratricopeptide TPR_2 repeat protein [Thermobaculum terrenum ATCC
BAA-798]
Length = 2240
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 130/321 (40%), Gaps = 37/321 (11%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
E EE LS +++ + D R A LG K GR+ ++ L L++DPNN L
Sbjct: 988 EEEEALSHFRKAARLDARNAQYALDLGACASKLGRVNEGLTWLEKALSLDPNNGQAHAEL 1047
Query: 207 GIAYFQSGDMEQSAKCFQ-DLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
G+ G E++ F+ L++ +QN ++Y L YG ACL
Sbjct: 1048 GMLMGSRGQWEEALAHFRASLLIDEQN-----VDY----LHMYGI------------ACL 1086
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
A A + L AL DP+ A ++ A A + G + + L++A +L+ +S
Sbjct: 1087 -HTDATEDAIKTLERALALDPRRADVYVTYAEALEIAGKRDEAIQNLQEAVRLDDTNVSY 1145
Query: 326 RYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKT--HH 383
+ + S ++ Q+ + L ++ E E + + +K HH
Sbjct: 1146 KVKLG-SMLRRYGEYQDAEDLLLKCTDDHP----ESAQAHSELGMLYMDLGLQEKALRHH 1200
Query: 384 EVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLAN 443
E+A + + E A L A + +L A++A+P+AA + L
Sbjct: 1201 EIACSLDDRSPEYKYRMALA-------LIHLKRYAEAIDTILTAIQANPEAAEYYHALGR 1253
Query: 444 AYYLTGDHRSSGKCLEKVLMV 464
A+ + + + EK + +
Sbjct: 1254 AHMGLSQYEEAVQAFEKAVRI 1274
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 123/325 (37%), Gaps = 31/325 (9%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
EL L+ K++ D A +G I + G+ Q S+ L + + PN D + +
Sbjct: 1532 ELTSALALYKQAAMLDPLNADYHRKIGSIYRQLGKTQESLQSLQKAIDLAPNAPDSLFEI 1591
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G Y Q+ +++ K Q ++P +Y ++ L L
Sbjct: 1592 GQLYLQTDRFDEACKVLQKATQLAPDNPTYRFHYGLAIM-----RLKEREDKLRSARLLA 1646
Query: 267 QASAVNVAK--ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS 324
+S V+ A+ E + AAL+ + A L Y L D+ S+ AA ++ +C
Sbjct: 1647 SSSQVSYAQAIEEIEAALRIEHNHADWHNTLGELYELVDDYESALHHFRWAADIDSDCAL 1706
Query: 325 TRY--AVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTH 382
+Y +++D +R + +MA V+++P A A ++ + T+
Sbjct: 1707 FQYNQGRIYKKLRDYDR--------AIRAFQMA--------VRLDPEFAQA-YSELGATY 1749
Query: 383 HEVAAAFETEENELSKMEECAGAGES-----AFLDQASAVNVAKECLLAALKADPKAAHI 437
+ V E N ++ G + + Q A L A + DP+ I
Sbjct: 1750 NMVGNHSEALINYERALQIRPDDGLTLRRLGSTYRQMKRFKDAISILQKAAEIDPQDPEI 1809
Query: 438 WANLANAYYLTGDHRSSGKCLEKVL 462
+ L AY G HR + E L
Sbjct: 1810 YNELGLAYRAQGKHREALAEFEHAL 1834
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 120/287 (41%), Gaps = 47/287 (16%)
Query: 56 KVSSLKTGLVHVARKM---PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 112
K+ + GL + + + P N AH LG++ GQ +A++ + + LL E ++
Sbjct: 1019 KLGRVNEGLTWLEKALSLDPNNGQAHAELGMLMGSRGQWEEALAHFRAS---LLIDEQNV 1075
Query: 113 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 172
+ ++ CL +++ E+ + L+ ++ D R+A V+ T
Sbjct: 1076 ------DYLHMYGIACLHTDAT--------------EDAIKTLERALALDPRRADVYVTY 1115
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK-DQ 231
L +G+ +I L + +D N LG + G+ + + +DL+LK
Sbjct: 1116 AEALEIAGKRDEAIQNLQEAVRLDDTNVSYKVKLGSMLRRYGEYQDA----EDLLLKCTD 1171
Query: 232 NHPAALINYAALLLCKYGSVLAGAGANTGEGAC-LDQASA----------VNVAK----- 275
+HP + ++ L + L E AC LD S +++ +
Sbjct: 1172 DHPESAQAHSELGMLYMDLGLQEKALRHHEIACSLDDRSPEYKYRMALALIHLKRYAEAI 1231
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
+ +L A++A+P+AA + L A+ + + + EKA ++ P+
Sbjct: 1232 DTILTAIQANPEAAEYYHALGRAHMGLSQYEEAVQAFEKAVRIAPSV 1278
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 89/465 (19%), Positives = 172/465 (36%), Gaps = 96/465 (20%)
Query: 81 LGLMYQRLGQPLKAVSSYEKAEEI-------------LLRCEA--DIARPELLSLVQI-- 123
LG+ Y+R G +AV ++EKA E+ +LR + D+A L +++
Sbjct: 1319 LGICYERRGWLHEAVQAFEKAIELQPGEPVYLSNAGNVLRQQRKHDLALQHLQKAIELDS 1378
Query: 124 -----HHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLK 178
+H L+ + G ++ + S+ LG+++
Sbjct: 1379 NFAEPYHQMALVMQDMG-----------RFDDAYDLFQRSISLSPDNPRYHYNLGILMRS 1427
Query: 179 SGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD------------- 225
G L +I+ +S + + PNN + L YFQ G ++++ K ++
Sbjct: 1428 QGDLHDAINQVSKAIDIQPNNAEWHSTLADLYFQIGMLDKARKEAEEASRLDPDNYRYHR 1487
Query: 226 ----LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAA 281
+ + Q+ AL + L C A A + + A + SA+ + K+ +
Sbjct: 1488 QLSVIARETQDLDQALASARQALKCAPDEPQAIAELASVQEALGELTSALALYKQAAM-- 1545
Query: 282 LKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA-----VSRIKD 336
DP A + + Y G + S + L+KA L PN + + + R +
Sbjct: 1546 --LDPLNADYHRKIGSIYRQLGKTQESLQSLQKAIDLAPNAPDSLFEIGQLYLQTDRFDE 1603
Query: 337 AERSQEPTEQL-----SWAGNEMASILR---EGDPVQIEPPIAWAGFAAVQKTHHEVAAA 388
A + + QL ++ + +I+R D ++ +A + + + E+ AA
Sbjct: 1604 ACKVLQKATQLAPDNPTYRFHYGLAIMRLKEREDKLRSARLLASSSQVSYAQAIEEIEAA 1663
Query: 389 FETEENE------LSKMEECAGAGESAFLDQASAVNVAKECLL----------------- 425
E N L ++ E ESA A ++ +C L
Sbjct: 1664 LRIEHNHADWHNTLGELYELVDDYESALHHFRWAADIDSDCALFQYNQGRIYKKLRDYDR 1723
Query: 426 ------AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
A++ DP+ A ++ L Y + G+H + E+ L +
Sbjct: 1724 AIRAFQMAVRLDPEFAQAYSELGATYNMVGNHSEALINYERALQI 1768
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 72/205 (35%), Gaps = 22/205 (10%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
++ E L + + D+ A+ G I K +I + +DP
Sbjct: 1685 DDYESALHHFRWAADIDSDCALFQYNQGRIYKKLRDYDRAIRAFQMAVRLDPEFAQAYSE 1744
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
LG Y G NH ALINY L + L G+
Sbjct: 1745 LGATYNMVG-----------------NHSEALINYERALQIRPDDGLTLRRL----GSTY 1783
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
Q A L A + DP+ I+ L AY G HR + E A KL P+ +
Sbjct: 1784 RQMKRFKDAISILQKAAEIDPQDPEIYNELGLAYRAQGKHREALAEFEHALKLRPDNATY 1843
Query: 326 RYAVAVSRIKDAERSQEPTEQLSWA 350
A++ +D ++++ E+L A
Sbjct: 1844 NRNAAIAH-QDLKQTKLAIEKLQHA 1867
Score = 38.1 bits (87), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 19/165 (11%)
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD----MEQSAKCFQDLIL 228
++ K+G L+ + L ++ +P LG+ Q GD +E+ K + +
Sbjct: 810 AIVQRKAGMLEDAEESLKKVIQNNPGLAPAYFELGMVAEQKGDYILALERYRKALE--LS 867
Query: 229 KDQNHPAALINYAALL---LCKYGSVLAGAGANTGEGACL-DQASAVNV-------AKEC 277
D H ++ +A L L + ++ A + E A + D+ + A EC
Sbjct: 868 PDNEHFIVAVSRSARLSGNLLQADELIRDAFSRMPESALIHDELGTIEFVRGNYQKASEC 927
Query: 278 LLAALKADPKAAHIWANLANAY-YLTGDHRSSGKCLEKAAKLEPN 321
L A K P+ + WA+L AY YLT + C E+A +L+ N
Sbjct: 928 FLKATKLSPETSDFWAHLGKAYRYLTRLDEAKEAC-EEALRLDAN 971
>gi|15229253|ref|NP_187074.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC [Arabidopsis
thaliana]
gi|75336082|sp|Q9M8Y0.1|SEC_ARATH RecName: Full=Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC; AltName:
Full=Protein SECRET AGENT
gi|6721161|gb|AAF26789.1|AC016829_13 putative O-linked GlcNAc transferase [Arabidopsis thaliana]
gi|18139887|gb|AAL60196.1|AF441079_1 O-linked N-acetyl glucosamine transferase [Arabidopsis thaliana]
gi|20259324|gb|AAM13988.1| putative O-linked GlcNAc transferase [Arabidopsis thaliana]
gi|21436429|gb|AAM51415.1| putative O-linked GlcNAc transferase [Arabidopsis thaliana]
gi|110742062|dbj|BAE98963.1| O-linked GlcNAc transferase like protein [Arabidopsis thaliana]
gi|332640535|gb|AEE74056.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC [Arabidopsis
thaliana]
Length = 977
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 109/264 (41%), Gaps = 38/264 (14%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A+ LG +Y+ LG+P +A+ Y+ A + +R + +A + S+
Sbjct: 254 PAFPDAYLNLGNVYKALGRPTEAIMCYQHA--LQMRPNSAMAFGNIASIY---------- 301
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
E +L+ + K+++ D R +N LG L GR+ ++ +
Sbjct: 302 -----------YEQGQLDLAIRHYKQALSRDPRFLEAYNNLGNALKDIGRVDEAVRCYNQ 350
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALI-----NYA 241
LA+ PN+ + NLG Y + M ++ F+ + L + A+I NY+
Sbjct: 351 CLALQPNHPQAMANLGNIYMEWNMMGPASSLFKATLAVTTGLSAPFNNLAIIYKQQGNYS 410
Query: 242 ALLLCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 297
+ C Y VL A A G + V A + + A+ P A ANLA+
Sbjct: 411 DAISC-YNEVLRIDPLAADALVNRGNTYKEIGRVTEAIQDYMHAINFRPTMAEAHANLAS 469
Query: 298 AYYLTGDHRSSGKCLEKAAKLEPN 321
AY +G ++ ++A L P+
Sbjct: 470 AYKDSGHVEAAITSYKQALLLRPD 493
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 17/143 (11%)
Query: 193 LAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK----- 247
L + P +C GN+ A+ + GD +++ + + I N A N A+ + K
Sbjct: 114 LRIQPQFAECYGNMANAWKEKGDTDRAIRYYLIAIELRPNFADAWSNLASAYMRKGRLSE 173
Query: 248 ----------YGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 297
+L A +N G + ++ A C L A++ P A W+NLA
Sbjct: 174 ATQCCQQALSLNPLLVDAHSNLGN--LMKAQGLIHEAYSCYLEAVRIQPTFAIAWSNLAG 231
Query: 298 AYYLTGDHRSSGKCLEKAAKLEP 320
+ +GD + + ++A KL+P
Sbjct: 232 LFMESGDLNRALQYYKEAVKLKP 254
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 75/195 (38%), Gaps = 14/195 (7%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
+ ++Q A+ + + I + G+L +I L+ DP + NLG A G
Sbjct: 281 QHALQMRPNSAMAFGNIASIYYEQGQLDLAIRHYKQALSRDPRFLEAYNNLGNALKDIGR 340
Query: 216 MEQSAKCFQDLILKDQNHPAALINYAAL-----LLCKYGSVL-AGAGANTGEGACLD--- 266
++++ +C+ + NHP A+ N + ++ S+ A TG A +
Sbjct: 341 VDEAVRCYNQCLALQPNHPQAMANLGNIYMEWNMMGPASSLFKATLAVTTGLSAPFNNLA 400
Query: 267 ----QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
Q + A C L+ DP AA N N Y G + + A P
Sbjct: 401 IIYKQQGNYSDAISCYNEVLRIDPLAADALVNRGNTYKEIGRVTEAIQDYMHAINFRPT- 459
Query: 323 MSTRYAVAVSRIKDA 337
M+ +A S KD+
Sbjct: 460 MAEAHANLASAYKDS 474
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 65/174 (37%), Gaps = 21/174 (12%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
+ E S E+++ A+ W+ L + ++SG L ++ + + P D NLG
Sbjct: 205 IHEAYSCYLEAVRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPAFPDAYLNLG 264
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 267
Y G ++ C+Q + N A N A++ +
Sbjct: 265 NVYKALGRPTEAIMCYQHALQMRPNSAMAFGNIASIYY---------------------E 303
Query: 268 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
+++A AL DP+ + NL NA G + +C + L+PN
Sbjct: 304 QGQLDLAIRHYKQALSRDPRFLEAYNNLGNALKDIGRVDEAVRCYNQCLALQPN 357
>gi|206603461|gb|EDZ39941.1| putative TPR domain-containing protein [Leptospirillum sp. Group II
'5-way CG']
Length = 327
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 153 SKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQ 212
S LKES+ S ++ V+ +T L +G L+ ++ +L+ LL DP N D + LG YF+
Sbjct: 110 SLLKESLTSMEKRDVLLHT-AFSLHGTGELRKAVRMLNELLDEDPLNTDALETLGKIYFE 168
Query: 213 SGDMEQSAKCFQDLILKDQNHP 234
G E++ + F +L D HP
Sbjct: 169 QGHFEEAERYFLELAEMDPAHP 190
>gi|427739371|ref|YP_007058915.1| hypothetical protein Riv7116_6007 [Rivularia sp. PCC 7116]
gi|427374412|gb|AFY58368.1| tetratricopeptide repeat protein [Rivularia sp. PCC 7116]
Length = 471
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 71/182 (39%), Gaps = 21/182 (11%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E EE L + ++ + + +W G+ L + G+LQ ++S L + + P+ +
Sbjct: 55 ENFEEALIDFERAITNSSHSHYIWYERGVSLFRLGKLQEALSSLDIAIEIQPDYLKALLL 114
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
GI + +E + F+ +IL N+P A +G L
Sbjct: 115 QGIVMLEQKKLEPALISFEKIILIKPNYPKAWYE---------------------KGLTL 153
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ + A C A++ PK W + S+ C EKA ++EPN +T
Sbjct: 154 YELGQLEDALMCFDKAIQYKPKFDLAWYRKGITLFDLEQLESALICFEKAIEIEPNDANT 213
Query: 326 RY 327
Y
Sbjct: 214 WY 215
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 113/294 (38%), Gaps = 39/294 (13%)
Query: 57 VSSLKTGLVHVARKMPKNAHAHFLL---GLMYQRLGQPLKAVSSYEKAEEI--------- 104
+ + + L+ R + ++H+H++ G+ RLG+ +A+SS + A EI
Sbjct: 54 LENFEEALIDFERAITNSSHSHYIWYERGVSLFRLGKLQEALSSLDIAIEIQPDYLKALL 113
Query: 105 ---LLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQS 161
++ E P L+S +I + P++ + L E +LE+ L +++Q
Sbjct: 114 LQGIVMLEQKKLEPALISFEKIILIKPNYPKAWYEKGLTL-YELGQLEDALMCFDKAIQY 172
Query: 162 DTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 221
+ + W G+ L +L+S++ + ++PN+ + G ++ +E +
Sbjct: 173 KPKFDLAWYRKGITLFDLEQLESALICFEKAIEIEPNDANTWYEKGCTLWKMEKLEYAIF 232
Query: 222 CFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAA 281
CF I + NH L Y +G L A C A
Sbjct: 233 CFDKAI--EYNHDLNLAWY-------------------HKGIALFDLGNFESALTCFEKA 271
Query: 282 LKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP-NC-MSTRYAVAVSR 333
++ P + A Y G + + KL+P NC + R A+ +
Sbjct: 272 IQIQPDFSEALCRKAEILYSLGQLEDTIDTFNQVLKLDPQNCQVRNRLGTALGK 325
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 175 ILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP 234
IL G+L+ +I + +L +DP NC LG A +S E + F +I D +
Sbjct: 288 ILYSLGQLEDTIDTFNQVLKLDPQNCQVRNRLGTALGKSERYEDAILAFDKVIEIDSH-- 345
Query: 235 AALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVN 272
NYAA C G L N A L++A +N
Sbjct: 346 ----NYAA--HCFRGYTLHKLRRNEDAIAALNKAIEIN 377
>gi|351707255|gb|EHB10174.1| Transmembrane and TPR repeat-containing protein 1 [Heterocephalus
glaber]
Length = 780
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 89/424 (20%), Positives = 172/424 (40%), Gaps = 68/424 (16%)
Query: 71 MPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI-------------LLRCEADIARPEL 117
+P NA H+ + G+ +A+ Y A ++ L+R A+ R
Sbjct: 377 LPHNAKVHYNYANFLKDQGRNREAIYHYRTALKLYPRHASALNNLGTLMRDTAEAKRYYQ 436
Query: 118 LSLVQIH--HAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLI 175
+L Q+H H++ L + N L + E+ EE ++ LKES++ A +++L +
Sbjct: 437 RAL-QLHPKHSRALF---NLGNLLKSQ---EKKEEAVALLKESIKYGPEFADAYSSLASL 489
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
L + R + + + + + P++ D N G+ SG E++A +Q ++ +H
Sbjct: 490 LAEQERFKEAEEIYQAGIKNCPDSSDLHNNYGVFLVDSGSPEKAAAHYQQAVILSPHHHV 549
Query: 236 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 295
A++N G + G N ++A+E AL+ + A + L
Sbjct: 550 AMVN--------LGRLYRSLGEN-------------DMAEEWYKRALQVA-REAETLSPL 587
Query: 296 ANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA-----VSRIKDAERSQEPTEQLSWA 350
YY TG + + + +A L+P R A+A + + K+AE+ TE +
Sbjct: 588 GALYYNTGRYEEALQVYHEAVALQPLQRELRLALAQVLAVMGQTKEAEKM---TEHIVSE 644
Query: 351 GNEMASILREGDPVQIEPPIAWAGFAAVQKTH----HEVAAAFETEENELSKMEECAGAG 406
G E R + + Q+ H H + A + + + + E
Sbjct: 645 GAECLECYR-----------LLSAIYSKQQDHDKALHAIDKALQLKPKDPKVVSELFFTK 693
Query: 407 ESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMVYC 466
+ +Q + ++ A E AA+ +P+ A W N+ ++ G + S+ E+ L +
Sbjct: 694 GNQLREQ-NLLDKAFESYNAAVALNPEQAQAWMNMGGIQHIKGKYMSARAYYERALQLVP 752
Query: 467 SSNL 470
S L
Sbjct: 753 DSKL 756
>gi|255594632|ref|XP_002536129.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
gi|223520752|gb|EEF26254.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
Length = 448
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 69/164 (42%), Gaps = 8/164 (4%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+L+E ++ ++ ++ + A LG +L G+LQS++ + + PN D NL
Sbjct: 69 KLDEAMASYQQGLRIQPQDARGHFNLGTVLRDKGQLQSAVQSYERAIVLFPNYTDAYNNL 128
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLC--KYGSVLAGAGANTGEG-- 262
G + GDM ++ + +Q + ++ HP A N L ++ + A+ +
Sbjct: 129 GETWRDQGDMTRAVQYYQQALQRNPQHPGANYNMGEFLYLAKRFEEAIPHFEASQLDDWQ 188
Query: 263 ----ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLT 302
CL +A K+ +K P A A L+ Y L
Sbjct: 189 SRVLYCLYRAEKFEAFKQLRDDIIKQGPHTAPFIATLSTHYSLN 232
>gi|260893921|ref|YP_003240018.1| hypothetical protein Adeg_2091 [Ammonifex degensii KC4]
gi|260866062|gb|ACX53168.1| Tetratricopeptide TPR_2 repeat protein [Ammonifex degensii KC4]
Length = 212
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 66/172 (38%), Gaps = 21/172 (12%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
LEE E++Q+ R W LG I K G L+ I + + ++P NLG
Sbjct: 41 LEEAEDYFLEAIQNGLRMFEAWVNLGYIYFKRGELEKVIEANKAAIEIEPRYSRGYANLG 100
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 267
AY Q E++ + + + A N L A G D
Sbjct: 101 FAYLQLERTEEAISALEKALELEPRMAQAWCN------------LVSAYLQKG-----DI 143
Query: 268 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLE 319
A+ V K A++ P NLA AYYL GD+ + + LE A K +
Sbjct: 144 DKAIEVGK----TAVEVAPDFGLAHNNLACAYYLKGDYERAAEHLELALKYQ 191
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
L+ E EE +S L+++++ + R A W L L+ G + +I V + + V P+
Sbjct: 104 LQLERTEEAISALEKALELEPRMAQAWCNLVSAYLQKGDIDKAIEVGKTAVEVAPDFGLA 163
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQN--HP 234
NL AY+ GD E++A+ +L LK Q HP
Sbjct: 164 HNNLACAYYLKGDYERAAEHL-ELALKYQFPVHP 196
>gi|147769448|emb|CAN74770.1| hypothetical protein VITISV_014241 [Vitis vinifera]
Length = 306
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 21/175 (12%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
+ + +++ +E++Q D R A + + + G + +I + + PN CD N
Sbjct: 110 HDFDMCIARNEEALQIDPRFAECYGNMANAWKEKGNVDLAIRYYLIAIELRPNFCDAWSN 169
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
L AY + G + ++A+C + A IN +L A +N G +
Sbjct: 170 LASAYMRKGRLNEAAQCCRQ---------ALAIN----------PLLVDAHSNLGN--FM 208
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
+ A C + AL+ P A W+NLA + +GD + + ++A KL+P
Sbjct: 209 KAQGLIQEAYSCYIEALRIQPSFAIAWSNLAGLFMESGDLTRALQYYKEAVKLKP 263
>gi|386346909|ref|YP_006045158.1| hypothetical protein [Spirochaeta thermophila DSM 6578]
gi|339411876|gb|AEJ61441.1| Tetratricopeptide TPR_2 repeat-containing protein [Spirochaeta
thermophila DSM 6578]
Length = 194
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
LL+ GR + +I +L ++L +P++ + LG+A+ +SG ++ K + K++ P
Sbjct: 15 LLQQGRYEEAIPLLQNILYEEPDHAGALHRLGVAFTESGRQGEAIKTLSFALKKEEKDPD 74
Query: 236 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 295
Y AC + + AKE A++ P A NL
Sbjct: 75 IWEAYGC--------------------ACYRRGK-LEEAKEAFEKAVELFPYHASALRNL 113
Query: 296 ANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA--VSRIKDAERSQEPTEQL 347
++ D ++S +CLEK+ ++ P T +A++ +KD ++++E QL
Sbjct: 114 GVTLHVMKDFKASYRCLEKSREINPEDYLTLFALSNVCIHLKDFDQAREVLYQL 167
>gi|108761475|ref|YP_630180.1| hypothetical protein MXAN_1942 [Myxococcus xanthus DK 1622]
gi|108465355|gb|ABF90540.1| MJ0042 family finger-like domain/tetratricopeptide repeat protein
[Myxococcus xanthus DK 1622]
Length = 1628
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 91/208 (43%), Gaps = 13/208 (6%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+LEE +++L+++ D R + TLG +LL+ G L + S L L+ +P+N + + L
Sbjct: 1357 QLEEAVAELEKAKAEDPRSTTIPITLGAVLLERGDLPGAESNLGLALSNEPSNHEALYYL 1416
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL-----------LCKYGSVLAGA 255
+ + + Q+ + + + N P Y +L + L G+
Sbjct: 1417 ALVKARRLEFTQALDNMRKAVERAPNRPDYHYAYGVILRDAKNLPDAMSAWRKTVELDGS 1476
Query: 256 GANTGE--GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
A+ E G L + + A A+LKADP+ + ++ +AY+ + K +
Sbjct: 1477 HADAHEALGHALLEGGQFDEAIASFEASLKADPRRTRVLGSIGDAYFAAARWNDAIKRYQ 1536
Query: 314 KAAKLEPNCMSTRYAVAVSRIKDAERSQ 341
A K +P Y VA + + A+ ++
Sbjct: 1537 SALKADPKLTYVYYKVARAFTEQAQHAK 1564
>gi|428309254|ref|YP_007120231.1| Flp pilus assembly protein TadD [Microcoleus sp. PCC 7113]
gi|428250866|gb|AFZ16825.1| Flp pilus assembly protein TadD [Microcoleus sp. PCC 7113]
Length = 325
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 94/232 (40%), Gaps = 27/232 (11%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+L E ++ +++ Q + + A LGL L +SG+LQ+S VDPN NL
Sbjct: 82 KLPEAIAAFRQASQLNPQLAPAHYNLGLALRQSGQLQASADAFYQATQVDPNFALAFANL 141
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL---------LCKYGSVLAGAGA 257
G A + +++Q+ + + N A NY LL + ++ + L
Sbjct: 142 GAALLEGNNLQQARDYLTRALELEPNLGVAHYNYGLLLSQAGDQEQAIDQFKNALQ-VSP 200
Query: 258 NTGE-----GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 312
N E G Q + AK+ ALK +PK A NL + + G+ ++
Sbjct: 201 NAPEPAYHIGLIYLQQGKIEDAKKLFQQALKINPKYAEAHYNLGSILFSQGNLDAALTAF 260
Query: 313 EKAAKLEPNCMSTRYAVAV-----SRIKDAERSQEPTEQL-------SWAGN 352
KAA+ N + Y + +R DA++ + + L WA N
Sbjct: 261 RKAAESNSNYPNAYYGAGLVFLRQNRFSDAQQVLQYAKMLYTVQGNSQWAAN 312
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 74/186 (39%), Gaps = 40/186 (21%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
AV + G+ L++ G+L +I+ ++P NLG+A QSG ++ SA F
Sbjct: 67 AVEFLNKGIGLIQQGKLPEAIAAFRQASQLNPQLAPAHYNLGLALRQSGQLQASADAFYQ 126
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 285
D N A N A LL EG L Q A++ L AL+ +
Sbjct: 127 ATQVDPNFALAFANLGAALL---------------EGNNLQQ------ARDYLTRALELE 165
Query: 286 PKAAHIWANLANAYY-------LTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV-----SR 333
P NL A+Y GD + + A ++ PN Y + + +
Sbjct: 166 P-------NLGVAHYNYGLLLSQAGDQEQAIDQFKNALQVSPNAPEPAYHIGLIYLQQGK 218
Query: 334 IKDAER 339
I+DA++
Sbjct: 219 IEDAKK 224
>gi|449130269|ref|ZP_21766490.1| hypothetical protein HMPREF9724_01155 [Treponema denticola SP37]
gi|448943108|gb|EMB24001.1| hypothetical protein HMPREF9724_01155 [Treponema denticola SP37]
Length = 992
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 66/163 (40%), Gaps = 21/163 (12%)
Query: 168 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
+ N +G+I + SI +L A+D N + NLG Y Q+GD + + +CF D++
Sbjct: 79 ILNNMGVIYRRLNMFNESIVILEKAKAIDSKNETTLYNLGNTYKQNGDYKHAIQCFTDVL 138
Query: 228 LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPK 287
P + Y L GSV C D + A+ K LK DP
Sbjct: 139 ---DIKPDDALAYNHL-----GSVYF---------LCKDYSKALETYK----IGLKVDPN 177
Query: 288 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
+ NLA Y ++ + + A K +PN A+A
Sbjct: 178 HPFLNFNLAELYKEEKHYKEAINSYQTAMKTKPNWYEALAAIA 220
>gi|88603564|ref|YP_503742.1| hypothetical protein Mhun_2318 [Methanospirillum hungatei JF-1]
gi|88189026|gb|ABD42023.1| TPR repeat [Methanospirillum hungatei JF-1]
Length = 245
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 72/176 (40%), Gaps = 27/176 (15%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E + +E+++ + + W +G+ GR +I + +L +DP N + N G
Sbjct: 61 QEAVEAFEEALKLNDKDPRYWLYMGINYFFMGRYSKAIPCFNMVLEIDPTNLHALSNKGS 120
Query: 209 AYFQSGDMEQSAKCFQ---DLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
A + ++S +CF +LI D N AL N L+
Sbjct: 121 ALAEIDRHQESVECFNRILELIPGDVN---ALFNKGISLM-----------------KLK 160
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
D SA+ C LK D + + W L N T + + + KC ++ ++EPN
Sbjct: 161 DYKSAIG----CFKEILKQDAEDSDAWFELGNCLSKTDNCKEAIKCFDRVIRIEPN 212
>gi|119484720|ref|ZP_01619202.1| TPR repeat protein [Lyngbya sp. PCC 8106]
gi|119457538|gb|EAW38662.1| TPR repeat protein [Lyngbya sp. PCC 8106]
Length = 335
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 76/195 (38%), Gaps = 21/195 (10%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+ E+ + LK +++ + ++N LGL + +SG + ++ + L +P N N
Sbjct: 86 KYEKAIKDLKIALKFNPTSDAIYNNLGLAIAQSGEYEDALKYYNKALLFNPKNHKTYHNR 145
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G +++ G + + + F I N+ A IN G C
Sbjct: 146 GRSFYMGGRKQDAIQDFNKTIELSPNYTKAYIN---------------------RGLCHH 184
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
Q A E ALK D + + N YY + RS+ +A +L+P +
Sbjct: 185 QLGEHQAAIEDYNTALKIDAYNVYAYYNRGCVYYSLKEMRSAIDDFNQAIQLDPTYIKAY 244
Query: 327 YAVAVSRIKDAERSQ 341
++R K +++
Sbjct: 245 LNRGLARYKSGNQTE 259
>gi|449117458|ref|ZP_21753875.1| hypothetical protein HMPREF9726_01860 [Treponema denticola H-22]
gi|448950659|gb|EMB31480.1| hypothetical protein HMPREF9726_01860 [Treponema denticola H-22]
Length = 992
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 66/163 (40%), Gaps = 21/163 (12%)
Query: 168 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
+ N +G+I + SI +L A+D N + NLG Y Q+GD + + +CF D++
Sbjct: 79 ILNNMGVIYRRLNMFNESIVILEKAKAIDSKNETTLYNLGNTYKQNGDYKHAIQCFTDVL 138
Query: 228 LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPK 287
P + Y L GSV C D + A+ K LK DP
Sbjct: 139 ---DIKPDDALAYNHL-----GSVYF---------LCKDYSKALETYK----IGLKVDPN 177
Query: 288 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
+ NLA Y ++ + + A K +PN A+A
Sbjct: 178 HPFLNFNLAELYKEEKHYKEAINSYQTAMKTKPNWYEALAAIA 220
>gi|343084159|ref|YP_004773454.1| hypothetical protein [Cyclobacterium marinum DSM 745]
gi|342352693|gb|AEL25223.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyclobacterium
marinum DSM 745]
Length = 470
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 85/215 (39%), Gaps = 30/215 (13%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
+EIL+ +E + D A W LG++ + G+ + +I+ L +D NLG
Sbjct: 185 FDEILNFYQEFIDQDPYNANAWYNLGVVYNRLGKFEDAIAAYDYALLIDDTFSSAYFNLG 244
Query: 208 IAYFQSGDMEQSAKCFQDLI-------------------LKDQNHPAALINYAALLLCKY 248
A + E++ + + + I L + +A L +Y
Sbjct: 245 NALMNTNQYEKALEAYLNTINCEGSNAENCCYLAASYEKLDQIDMAFKYFKKSAKLDSEY 304
Query: 249 GSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSS 308
G G C+ + A A+K + A+ W LA+A Y G+ +SS
Sbjct: 305 DDAWFGL------GMCMIKKKKYFEAIHYFKKAIKLTAENANYWVGLADAEYELGNLQSS 358
Query: 309 GKCLEKAAKLEPNCMSTRYAVAV-----SRIKDAE 338
+ E+A LEP + T +++ +R ++AE
Sbjct: 359 SEAYEEAINLEPGILETYVNLSLIYFDQNRFEEAE 393
>gi|118350326|ref|XP_001008444.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89290211|gb|EAR88199.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 550
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 124/286 (43%), Gaps = 50/286 (17%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P+N +A F LG+ ++ + +A+ +++K L + D L LV+I+H+ L+
Sbjct: 233 PENINALFELGVTQFQIEELDEAIHNFKKT----LMIQPDHFNA-LFKLVEIYHSADLIE 287
Query: 132 ESSGDNSLDKELEPEELEE--ILSKL--------------KESMQSDTRQAVVWNTLGLI 175
+ +++P ++ IL+ + ++ ++ D+R A LG+I
Sbjct: 288 YAQEYLEQAIKIQPHNVKANLILAGIYLAQKMILEAKQLCEQVIKVDSRNADALYYLGII 347
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
K +Q +IS+ + ++P LG Y Q G +E + ++ ++ N+
Sbjct: 348 YQKENNIQKAISIFKEVTQINPTKYIAQIQLGQLYHQQGKVEDAIISYKRILQVQPNNYF 407
Query: 236 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVN------------VAKECLL---- 279
AL NY + LL + G N E C +A AV+ + ++ LL
Sbjct: 408 AL-NYLSFLLYELGDF------NQAELLC-KKALAVDPNAYEPYHNLGLIYQDKLLYEQA 459
Query: 280 -----AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
+ALK++P A + NL YY G+ + + E+A K P
Sbjct: 460 IKFYQSALKSNPDCAEAYNNLGCIYYEKGNLKEAINQFEEAIKANP 505
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 94/227 (41%), Gaps = 44/227 (19%)
Query: 73 KNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPE 132
+NA A + LG++YQ+ KA+S +++ +I IA+ + L Q++H Q
Sbjct: 336 RNADALYYLGIIYQKENNIQKAISIFKEVTQI--NPTKYIAQ---IQLGQLYHQQG---- 386
Query: 133 SSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSL 192
++E+ + K +Q N L +L + G + +
Sbjct: 387 --------------KVEDAIISYKRILQVQPNNYFALNYLSFLLYELGDFNQAELLCKKA 432
Query: 193 LAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVL 252
LAVDPN + NLG+ Y EQ+ K +Q + +++P Y L G +
Sbjct: 433 LAVDPNAYEPYHNLGLIYQDKLLYEQAIKFYQSAL---KSNPDCAEAYNNL-----GCIY 484
Query: 253 AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 299
G N E A+N +E A+KA+PK A NL+ Y
Sbjct: 485 YEKG-NLKE--------AINQFEE----AIKANPKFAEAHKNLSIIY 518
>gi|428219241|ref|YP_007103706.1| hypothetical protein Pse7367_3029 [Pseudanabaena sp. PCC 7367]
gi|427991023|gb|AFY71278.1| Tetratricopeptide TPR_2 repeat-containing protein [Pseudanabaena
sp. PCC 7367]
Length = 1639
Score = 51.6 bits (122), Expect = 8e-04, Method: Composition-based stats.
Identities = 63/290 (21%), Positives = 124/290 (42%), Gaps = 32/290 (11%)
Query: 32 ALEFGVDADGDQSGLGTSSSSREEKVSSLKTGLVHVARKM---PKNAHAHFLLGLMYQRL 88
A+E D D LG + ++ L+ + H + + P+ A++ LGL Y
Sbjct: 110 AIELDPDLDSAHFMLGYA----DQASGQLEQAIFHYQKAIDANPQRGDAYYNLGLAYGSR 165
Query: 89 GQPLKAVSSYEKAEEIL---LRCEADIARPEL----LSLVQIHHAQCLLPESSGDNSLDK 141
Q A+++ E+A ++L L+ +A+ Q H+ Q + + + +
Sbjct: 166 KQTNLAIANLEQAVQLLPNDLKIRISLAKEYKKAGNFQAAQPHYEQAIAIDPDHAETQFQ 225
Query: 142 ----ELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 197
+ +L+ + + + ++ D + ++ LG IL + G L+++I++ L V+P
Sbjct: 226 LGYVYHQTNQLDAAIRQYQRAIALDPNYELTYSNLGAILRRQGDLEAAIAMYEQALEVNP 285
Query: 198 NNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL--LLCKYGSVLAGA 255
N + NLG A+ +E + C++ ++ + P A+ + L LL K V A
Sbjct: 286 RNTSALYNLGNAFLAKHQIEDAIACYRQVV---EIKPDAIHAHQDLANLLFKTDIVAART 342
Query: 256 GANTGEGAC--------LDQASAVNVAKECLLAALKADPKA-AHIWANLA 296
A C L + N+ + ALK + AH++ANL+
Sbjct: 343 AAEDYHRGCAHIDPIATLANLISTNIKSDYYDVALKYFLEVEAHVYANLS 392
Score = 42.4 bits (98), Expect = 0.45, Method: Composition-based stats.
Identities = 53/270 (19%), Positives = 111/270 (41%), Gaps = 32/270 (11%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI--------LLRCEADIARPELLSLVQI 123
P +A AH+ LG + Q A+ SY++A E+ + AD A +L +
Sbjct: 81 PDSAKAHYSLGNVLMDAKQLAAAIESYQRAIELDPDLDSAHFMLGYADQASGQLEQAIFH 140
Query: 124 HHAQCLLPESSGDNSLDKEL---EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSG 180
+ GD + L ++ ++ L++++Q + +L K+G
Sbjct: 141 YQKAIDANPQRGDAYYNLGLAYGSRKQTNLAIANLEQAVQLLPNDLKIRISLAKEYKKAG 200
Query: 181 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 240
Q++ +A+DP++ + LG Y Q+ ++ + + +Q I D N+ + Y
Sbjct: 201 NFQAAQPHYEQAIAIDPDHAETQFQLGYVYHQTNQLDAAIRQYQRAIALDPNYE---LTY 257
Query: 241 AALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 300
+ L G++L G D +A+ + ++ AL+ +P+ NL NA+
Sbjct: 258 SNL-----GAILRRQG---------DLEAAIAMYEQ----ALEVNPRNTSALYNLGNAFL 299
Query: 301 LTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
+ C + +++P+ + +A
Sbjct: 300 AKHQIEDAIACYRQVVEIKPDAIHAHQDLA 329
>gi|119487585|ref|ZP_01621195.1| TPR repeat protein [Lyngbya sp. PCC 8106]
gi|119455754|gb|EAW36890.1| TPR repeat protein [Lyngbya sp. PCC 8106]
Length = 1107
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 118/312 (37%), Gaps = 45/312 (14%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
AV + ++G +L + +++ +I + L V P + NLG Y+ ++ +C+Q
Sbjct: 74 AVAYLSIGNVLQQQNQIELAIWAYTEALDVKPEFTEAQANLGSMYYHLQRFSEAIQCYQK 133
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 285
I D N +A+I + G Q + A C A+
Sbjct: 134 AIYFDSN--SAIIYWML-------------------GNAFSQTDQLEKAISCYQKAIDLQ 172
Query: 286 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAV-AVSRIKDAERSQEPT 344
P + LA + G + + +L+P+C A+ ++++ D
Sbjct: 173 PNQVKFYLKLAAILDIQGKTIQAISYYQTILRLQPDCSEAIVALRQLTQVDDPNNWANNL 232
Query: 345 EQLSWAGN----------EMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEEN 394
LS+ N ++AS L E + PI + + + E ET+ N
Sbjct: 233 TGLSFVSNSREEFEEGGVDLASPLTEAIETEQHYPINHSQTDDIFVENAENITPLETKYN 292
Query: 395 EL----SKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGD 450
EL S+ + C G+ A+ + ++ ALK PK H + L NA + G
Sbjct: 293 ELKAYQSQAKFCVDQGQF-----EQAITICQQ----ALKIQPKFYHAYVILGNALHFQGK 343
Query: 451 HRSSGKCLEKVL 462
++ + +VL
Sbjct: 344 LEAAIRAYSQVL 355
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 19/172 (11%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A H+ LG ++QRLG+ +++ S++ A EI EL +L+ Q
Sbjct: 393 PNFAVVHWNLGKIFQRLGRFEESIKSWKTALEIQPNLNGAKLHIELGNLL-TGQKQFKAA 451
Query: 132 ESSGDNSLDKELEPEELEEILS----------------KLKESMQSDTRQAVVWNTLGLI 175
SS +L E++P E+E L+ + +Q + + ++ +G
Sbjct: 452 ISSYQKAL--EIQPSEVEAHLNLGCLYSEQKQYETAIKTFQAGIQINPKNLDLYLNMGFA 509
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
L+K Q +I+ +LL + P+N + +LG Y +G ++Q+ + ++ I
Sbjct: 510 LVKLNHHQEAINCYQNLLNIQPDNKEAYASLGNIYANAGQVKQAIENYEQAI 561
>gi|449106403|ref|ZP_21743069.1| hypothetical protein HMPREF9729_01334 [Treponema denticola ASLM]
gi|451968112|ref|ZP_21921341.1| hypothetical protein HMPREF9728_00512 [Treponema denticola US-Trep]
gi|448964916|gb|EMB45582.1| hypothetical protein HMPREF9729_01334 [Treponema denticola ASLM]
gi|451703069|gb|EMD57451.1| hypothetical protein HMPREF9728_00512 [Treponema denticola US-Trep]
Length = 992
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 66/163 (40%), Gaps = 21/163 (12%)
Query: 168 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
+ N +G+I + SI +L A+D N + NLG Y Q+GD + + +CF D++
Sbjct: 79 ILNNMGVIYRRLNMFNESIVILEKAKAIDSKNETTLYNLGNTYKQNGDYKHAIQCFTDVL 138
Query: 228 LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPK 287
P + Y L GSV C D + A+ K LK DP
Sbjct: 139 ---DIKPDDALAYNHL-----GSVYF---------LCKDYSKALETYK----IGLKVDPN 177
Query: 288 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
+ NLA Y ++ + + A K +PN A+A
Sbjct: 178 HPFLNFNLAELYKEEKHYKEAINSYQTAMKTKPNWYEALAAIA 220
>gi|218442020|ref|YP_002380349.1| hypothetical protein PCC7424_5131 [Cyanothece sp. PCC 7424]
gi|218174748|gb|ACK73481.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
Length = 361
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 78/184 (42%), Gaps = 21/184 (11%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
+ L ++++ + + A ++ G + G + L+ + +DPN+ + N G+ Y
Sbjct: 168 MQDLNQAIRLNPKMAEAYSNRGNVRTTIGDTFGAFKDLNHAIGLDPNSAEAYNNRGVTYA 227
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 271
+ GD + K FQD N A L + G G E D A A+
Sbjct: 228 RVGDYQ---KAFQDF------------NQAIGLDPQLGLAYNNRGVMRREFG--DHAGAI 270
Query: 272 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 331
+ L AL+ DPK A + N + + G+HR + + ++A +L P+ + Y V
Sbjct: 271 ----QDLNQALRFDPKLAKAYNNRGDTHRELGNHREAIQDYDQAVRLIPDNPNIYYYRGV 326
Query: 332 SRIK 335
R +
Sbjct: 327 VRTQ 330
>gi|33866741|ref|NP_898300.1| TPR repeat-containing glycosyl transferase [Synechococcus sp. WH
8102]
gi|33639342|emb|CAE08724.1| Possible glycosyltransferase 2 fused to TPR-repeat domain
[Synechococcus sp. WH 8102]
Length = 400
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
+E EL+E ++ + + Q A+ W LGL+L + G + +++ S + +DPNN C
Sbjct: 285 MEQGELDEAIALTQTATQRAPEVALGWYNLGLMLRRRGDIAAALEAYSRAVELDPNNAAC 344
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLI--LKDQNHP 234
N +A GD+E S F+ I L+ Q P
Sbjct: 345 HQNRAVALLLGGDIEGSRAAFRTAITLLETQGRP 378
>gi|410940062|ref|ZP_11371881.1| tetratricopeptide repeat protein [Leptospira noguchii str.
2006001870]
gi|410784843|gb|EKR73815.1| tetratricopeptide repeat protein [Leptospira noguchii str.
2006001870]
Length = 367
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
K +++SD A+ + +LG + SG +S+I S L +DP+ D NLGI+Y+ G
Sbjct: 190 FKNAIKSDPGYALSYLSLGYLYDSSGNFKSAIRYYKSALKIDPDYPDIWNNLGISYYNDG 249
Query: 215 DMEQSAKCFQDLI 227
+E S F+ I
Sbjct: 250 QIENSISHFEKAI 262
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
K +++ D +WN LG+ G++++SIS + ++P + NLG Y Q D
Sbjct: 225 KSALKIDPDYPDIWNNLGISYYNDGQIENSISHFEKAIQLNPTFAYPVNNLGFIYIQKDD 284
Query: 216 MEQSAKCFQDLILKDQNHPAAL-INYAALLLCKY 248
++ K F I + P L YA L +C Y
Sbjct: 285 FSEAKKYFLRSIELKPSEPFLLGETYAGLSICNY 318
>gi|163798112|ref|ZP_02192049.1| TPR repeat [alpha proteobacterium BAL199]
gi|159176603|gb|EDP61180.1| TPR repeat [alpha proteobacterium BAL199]
Length = 618
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 91/235 (38%), Gaps = 55/235 (23%)
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
LG I L G ++ ++ +A+ P + +GNLG+AY + ++ CF+ + +
Sbjct: 43 LGTIALGGGETARALELIGHAVAIAPTDGKTVGNLGVAYLAQNKLAEAEDCFRRALDLEP 102
Query: 232 NHPAALINYAALLLCK--------------------------YGSVLAGAG----ANTGE 261
PA N+A LL + G++LA G A
Sbjct: 103 GQPALHANFATALLARGDRATALKAQSRAVELAPDSAVQRYNLGNLLAATGQTAKAAEAY 162
Query: 262 GACLD-----------------QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGD 304
GA LD QA ++ A+ L AL DP + AN A+ G
Sbjct: 163 GATLDIDPGHVGALNNLSVLHKQAGNLDEAEALLDEALLHDPMNPELLANHADILLQRGQ 222
Query: 305 HRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILR 359
+ + + +AA L P + R A+ ++ +LS AG E+A+ +R
Sbjct: 223 GERALETMRRAAGLAPGQATLRLALGSMLLE--------LGRLSEAGQELAAAMR 269
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 43/82 (52%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
AV LG +L +G+ + + L +DP + + NL + + Q+G+++++ +
Sbjct: 139 AVQRYNLGNLLAATGQTAKAAEAYGATLDIDPGHVGALNNLSVLHKQAGNLDEAEALLDE 198
Query: 226 LILKDQNHPAALINYAALLLCK 247
+L D +P L N+A +LL +
Sbjct: 199 ALLHDPMNPELLANHADILLQR 220
>gi|411118571|ref|ZP_11390952.1| methyltransferase, FkbM family [Oscillatoriales cyanobacterium
JSC-12]
gi|410712295|gb|EKQ69801.1| methyltransferase, FkbM family [Oscillatoriales cyanobacterium
JSC-12]
Length = 928
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 117/282 (41%), Gaps = 52/282 (18%)
Query: 61 KTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI---------------- 104
+T V P++ A F L L+ + G+P++A++ Y+K ++
Sbjct: 23 ETAYRQVVEDDPEHIEAWFWLALVTDQQGRPMEAIAHYQKVLQLQPNSAEAHGNLGSVWL 82
Query: 105 -LLRCEADIARPELLSLVQIHHAQC--LLPESSGD--NSLDKELEPEELEEILSKLKESM 159
L R + IA HH + L+P+++ N E +++E ++ ++++
Sbjct: 83 KLRRFDEAIA----------HHRKSVELMPQNAKAHYNLAIALYENNQVDEAITYYQQAV 132
Query: 160 QSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 219
A + LG+ L + G+ +I+ +A++PN+ +LG+A +Q G ++++
Sbjct: 133 ALMPEYANAHHNLGMALYRQGKADEAITHYQKAIALEPNHASARNSLGVALYQQGKIDEA 192
Query: 220 AKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLL 279
+ ++ I A L NY + A+ G L Q + A
Sbjct: 193 IEQYRQAI-------ATLPNYVS--------------AHDNLGIALKQQQKLEEAATHFQ 231
Query: 280 AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
A+ P A+ + NL N G++ + ++ +L+P
Sbjct: 232 TAISLRPDYANAYINLGNTMRELGNYDQAIAYCRESIRLQPT 273
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 15/188 (7%)
Query: 71 MPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPEL-----------LS 119
MP+ A+AH LG+ R G+ +A++ Y+KA I L AR L +
Sbjct: 135 MPEYANAHHNLGMALYRQGKADEAITHYQKA--IALEPNHASARNSLGVALYQQGKIDEA 192
Query: 120 LVQIHHAQCLLPE--SSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILL 177
+ Q A LP S+ DN + ++LEE + + ++ A + LG +
Sbjct: 193 IEQYRQAIATLPNYVSAHDNLGIALKQQQKLEEAATHFQTAISLRPDYANAYINLGNTMR 252
Query: 178 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL 237
+ G +I+ + + P N D G G E++ C++ I + A
Sbjct: 253 ELGNYDQAIAYCRESIRLQPTNADAHNTYGCVLVDLGRFEEAIACYEAAIQHRPDFADAH 312
Query: 238 INYAALLL 245
+N +LL
Sbjct: 313 LNLGIILL 320
>gi|398340129|ref|ZP_10524832.1| hypothetical protein LkirsB1_12213 [Leptospira kirschneri serovar
Bim str. 1051]
Length = 345
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E + K +++SD ++ + +LG + SG +S+I S L +DP+ D NLGI+
Sbjct: 185 EAIHLFKNAIKSDPEYSLSYLSLGYLYDSSGNFKSAIRYYKSALKIDPDYPDVWNNLGIS 244
Query: 210 YFQSGDMEQSAKCFQDLI 227
Y+ G +E S F+ I
Sbjct: 245 YYNDGQIENSISHFEKAI 262
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
K +++ D VWN LG+ G++++SIS + ++P + NLG Y Q D
Sbjct: 225 KSALKIDPDYPDVWNNLGISYYNDGQIENSISHFEKAIQLNPTFAYPVNNLGFIYIQKDD 284
Query: 216 MEQSAKCFQDLILKDQNHPAAL-INYAALLLCKY 248
+ K F I P L +A L +C Y
Sbjct: 285 FSDAKKYFLRSIELKPLEPFLLGETFAGLSICNY 318
>gi|145552589|ref|XP_001461970.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429807|emb|CAK94597.1| unnamed protein product [Paramecium tetraurelia]
Length = 310
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 107/277 (38%), Gaps = 36/277 (12%)
Query: 64 LVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQI 123
L+ A ++ + + H G++ Q+ Q KA+SSY+ A ++L P
Sbjct: 23 LLQKASQIKDSPYIHNAYGIIAQKQKQTDKAISSYQMALQLL---------PTF------ 67
Query: 124 HHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQ 183
QCL N +E E+ + L LK+++++D A N LG++ K +L+
Sbjct: 68 --PQCL------SNQATLLIETEKYSQALDLLKQALKTDQNNAEAHNNLGVLYYKQNKLE 119
Query: 184 SSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL 243
S + + + +N + N G+ + D Q+ +CF + I + A N
Sbjct: 120 LSQNEYMEAIKLKVHNPEAHSNQGVIFCAKQDYSQALQCFDEAIKLKNDFVKAYHNKGTT 179
Query: 244 LLCK---------YGSVLAGAGAN----TGEGACLDQASAVNVAKECLLAALKADPKAAH 290
L K Y + G + + L + A L A K P+ A
Sbjct: 180 LYEKENFKEAVEIYDKAIKGKTQDPETYYNKSIALQGLEQFDDALNALEQAYKLSPEMAL 239
Query: 291 IWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 327
++ Y G + K + A +L+PNC Y
Sbjct: 240 LYVEKGTLMYRKGKVDEAIKNYDLAIQLQPNCAEAYY 276
>gi|224144666|ref|XP_002325368.1| predicted protein [Populus trichocarpa]
gi|222862243|gb|EEE99749.1| predicted protein [Populus trichocarpa]
Length = 873
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 106/264 (40%), Gaps = 38/264 (14%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
PK A+ LG +Y+ LG P +A+ Y++A + RP + C
Sbjct: 150 PKFPDAYLNLGNVYKALGMPQEAIMCYQRAVQ---------TRPNYAMAFGNLASTCY-- 198
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
E ++E + K+++ D R +N LG L GR+ ++ +
Sbjct: 199 ------------ERGQVELAILHYKQAIACDQRFLEAYNNLGNALKDVGRVDEALQCYNQ 246
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALI-----NYA 241
L++ PN+ + NLG Y + +A C++ + L + A+I NY+
Sbjct: 247 CLSIQPNHPQALTNLGNIYMEWNMSAAAASCYKATLAVTTGLSAPFNNLAVIYKQQGNYS 306
Query: 242 ALLLCKYGSVL----AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 297
+ C Y VL A G + V+ A + + A+ P A ANLA+
Sbjct: 307 DAISC-YNEVLRIEPMAADGLVNRGNTYKEIGRVSEAIQDYIHAINIRPTMAEAHANLAS 365
Query: 298 AYYLTGDHRSSGKCLEKAAKLEPN 321
AY +G ++ K +A L P+
Sbjct: 366 AYKDSGHVEAAIKSYRQALLLRPD 389
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 72/169 (42%), Gaps = 21/169 (12%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
++K +E+++ R A + + + G + +I + + PN D NL AY
Sbjct: 3 IAKNEEALRLQPRFAECYGNMANAWKEKGDIDRAIRYYLVSIELRPNFADAWSNLASAYM 62
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 271
+ G + ++++C + AL L +L A +N G + V
Sbjct: 63 RKGRLNEASQCCRQ----------------ALAL---NPLLVDAHSNLGN--LMKAQGLV 101
Query: 272 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
A C L AL+ P A W+NLA + +GD + + ++A KL+P
Sbjct: 102 QEAYSCYLEALRIQPSFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKP 150
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 62/165 (37%), Gaps = 13/165 (7%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
++E S E+++ A+ W+ L + ++SG L ++ + + P D NLG
Sbjct: 101 VQEAYSCYLEALRIQPSFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPKFPDAYLNLG 160
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAA---------LLLCKYGSVLA----G 254
Y G +++ C+Q + N+ A N A+ L + Y +A
Sbjct: 161 NVYKALGMPQEAIMCYQRAVQTRPNYAMAFGNLASTCYERGQVELAILHYKQAIACDQRF 220
Query: 255 AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 299
A G L V+ A +C L P NL N Y
Sbjct: 221 LEAYNNLGNALKDVGRVDEALQCYNQCLSIQPNHPQALTNLGNIY 265
>gi|78183920|ref|YP_376355.1| TPR repeat-containing protein [Synechococcus sp. CC9902]
gi|78168214|gb|ABB25311.1| TPR repeat [Synechococcus sp. CC9902]
Length = 400
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
+E ++L+E + + + Q A+ W LGL+L K G + S++ LA+DPNN C
Sbjct: 285 MEQDQLDEAIQLTQTATQRAPEVALGWYNLGLMLRKKGEIASALEAYGRSLALDPNNAAC 344
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLI 227
N +A GD+E + F+ I
Sbjct: 345 HQNHAVARLLGGDIEAARNGFRKAI 369
>gi|40063048|gb|AAR37904.1| TPR domain protein [uncultured marine bacterium 560]
Length = 732
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 87/204 (42%), Gaps = 13/204 (6%)
Query: 131 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
P + NS+ +++E L ++ + + +++N G+ G+L ++
Sbjct: 6 PPQTEINSVITLYSSGQIQEALDTVETLTKDFPNEPLLYNISGVCYKTIGQLDVAVKSFE 65
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL------ 244
LA+ P+ + NLG+ + + G ++ + KC++D++ + H A N L
Sbjct: 66 KALAIKPDYTEVNYNLGLTFQELGQLDAAVKCYEDVLAVNPEHAEAHNNLGVTLKELEQL 125
Query: 245 ---LCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 297
+ Y +A A A+ G L + ++VA + A+ P A NL N
Sbjct: 126 DAAVKSYEKAIAIKPDYAEAHNNLGNALKELGQLDVAVKSYEKAIAIKPDFAETHNNLGN 185
Query: 298 AYYLTGDHRSSGKCLEKAAKLEPN 321
A G + KC E+A ++P+
Sbjct: 186 ALQGLGQLDEAVKCYEQAIAIKPD 209
>gi|294495545|ref|YP_003542038.1| hypothetical protein Mmah_0870 [Methanohalophilus mahii DSM 5219]
gi|292666544|gb|ADE36393.1| Tetratricopeptide TPR_2 repeat protein [Methanohalophilus mahii DSM
5219]
Length = 288
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 72/181 (39%), Gaps = 2/181 (1%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
EE L + ++ D + A W G ++ G+ Q ++ S L ++P D
Sbjct: 97 EEALEVIDSFLEDDPQDADKWFGHGFVMQSIGQHQKAVESFSKCLDLNPAFSDAWYCKAT 156
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLA-GAGANTGEGACLDQ 267
+ + + Q+ +C++ A Y+ L + + AG G+G L +
Sbjct: 157 LLYHNDEFTQALECYEMAAQHSDVKDFAFPRYSFLNIDPKPKLKKDAAGILYGKGNTLFK 216
Query: 268 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP-NCMSTR 326
A E AL +P++ IW LAN Y G+ + K K +L+P N +
Sbjct: 217 LERFEEAIEAFKGALDIEPESPKIWQGLANTYLKIGNDDRANKAFAKLLELDPENSQAKE 276
Query: 327 Y 327
Y
Sbjct: 277 Y 277
>gi|405364956|ref|ZP_11026402.1| MJ0042 family finger-like domain/tetratricopeptide repeat protein
[Chondromyces apiculatus DSM 436]
gi|397089521|gb|EJJ20430.1| MJ0042 family finger-like domain/tetratricopeptide repeat protein
[Myxococcus sp. (contaminant ex DSM 436)]
Length = 1350
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+LEE +++L+++ D R + TLG +LL+ G L + S L L+ +P+N + + L
Sbjct: 1079 QLEEAVAELEKAKTEDPRSTTIPITLGAVLLERGDLPGAESNLGLALSNEPSNHEALYYL 1138
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
+ + + Q+ + + + N P +YA ++ + L A A + LD
Sbjct: 1139 ALVKAKRLEFTQAMDNMRKAVERAPNRPD--YHYAYGVILRDAKNLPDAMAAWRKAVELD 1196
Query: 267 ---------------QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 311
++S + A ++LKADP+ + ++ +AY+ + K
Sbjct: 1197 RNHADGHEALGHALLESSQFDEAIAAFESSLKADPRRTRVLGSIGDAYFAAARWNDAIKR 1256
Query: 312 LEKAAKLEPNCMSTRYAVAVSRIKDAERSQ 341
+ A K +P Y VA + + A+ ++
Sbjct: 1257 YQSALKADPKLAYVYYKVARAFTEQAQHAK 1286
>gi|118375025|ref|XP_001020699.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89302466|gb|EAS00454.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 318
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 100/246 (40%), Gaps = 36/246 (14%)
Query: 108 CEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPE--ELEEILSKLKESMQS--DT 163
C+ ++ +L+ I+H Q +L E+S ++EP+ E+ L ++ ES+ +
Sbjct: 15 CKFNLNVLKLIVFWGIYHQQNMLEEASQFYLKALQIEPKNHEIYGQLGRVYESLNNLEQA 74
Query: 164 RQ-------------AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAY 210
RQ +V +N L + K L+ + + L + P C LG+ Y
Sbjct: 75 RQCYLNAINLNKFGPSVYYNDLATVYFKMNMLKEAKASYLKALEIFPEQPYCYNGLGLVY 134
Query: 211 FQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGA------- 263
Q ++QS +CFQ + N+ +A IN L Y L E A
Sbjct: 135 QQLSMLKQSKECFQKALEIYPNYVSAYINLGNLF---YQQNLLTEAKQQFEKALQLDPLD 191
Query: 264 --CLDQASAVNV-------AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 314
CL + + AK+ L AL+ +P+ + NL Y + + +C K
Sbjct: 192 YKCLYNLGNIYIDMQMLEDAKQYFLKALEINPQYVNGHNNLGLVYIDMKMFQQAKQCFLK 251
Query: 315 AAKLEP 320
A +++P
Sbjct: 252 ALEIDP 257
>gi|418677215|ref|ZP_13238491.1| tetratricopeptide repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418685525|ref|ZP_13246701.1| tetratricopeptide repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418741768|ref|ZP_13298142.1| tetratricopeptide repeat protein [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
gi|421091411|ref|ZP_15552182.1| tetratricopeptide repeat protein [Leptospira kirschneri str.
200802841]
gi|400322163|gb|EJO70021.1| tetratricopeptide repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|409999739|gb|EKO50424.1| tetratricopeptide repeat protein [Leptospira kirschneri str.
200802841]
gi|410740133|gb|EKQ84855.1| tetratricopeptide repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410751216|gb|EKR08195.1| tetratricopeptide repeat protein [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
Length = 368
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E + K +++SD ++ + +LG + SG +S+I S L +DP+ D NLGI+
Sbjct: 185 EAIHLFKNAIKSDPEYSLSYLSLGYLYDSSGNFKSAIRYYKSALKIDPDYPDVWNNLGIS 244
Query: 210 YFQSGDMEQSAKCFQDLI 227
Y+ G +E S F+ I
Sbjct: 245 YYNDGQIENSISHFEKAI 262
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
K +++ D VWN LG+ G++++SIS + ++P + NLG Y Q D
Sbjct: 225 KSALKIDPDYPDVWNNLGISYYNDGQIENSISHFEKAIQLNPTFAYPVNNLGFIYIQKDD 284
Query: 216 MEQSAKCFQDLILKDQNHPAAL-INYAALLLCKY 248
+ K F I P L +A L +C Y
Sbjct: 285 FSDAKKYFLRSIELKPLEPFLLGETFAGLSICNY 318
>gi|449103568|ref|ZP_21740313.1| hypothetical protein HMPREF9730_01210 [Treponema denticola AL-2]
gi|448964722|gb|EMB45390.1| hypothetical protein HMPREF9730_01210 [Treponema denticola AL-2]
Length = 992
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 65/163 (39%), Gaps = 21/163 (12%)
Query: 168 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
+ N +G+I + SI +L A+D N + NLG Y Q+GD + + +CF D++
Sbjct: 79 ILNNMGVIYRRLNMFNESIVILEKAKAIDSKNETTLYNLGNTYKQNGDYKHAIQCFTDVL 138
Query: 228 LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPK 287
P + Y L GSV C D A+ K LK DP
Sbjct: 139 ---DIKPDDALAYNHL-----GSVYF---------LCKDYPKALETYK----IGLKVDPN 177
Query: 288 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
+ NLA Y ++ + + A K +PN A+A
Sbjct: 178 HPFLNFNLAELYKEEKHYKEAINSYQTAMKTKPNWYEALAAIA 220
>gi|449118470|ref|ZP_21754879.1| hypothetical protein HMPREF9725_00344 [Treponema denticola H1-T]
gi|449123612|ref|ZP_21759937.1| hypothetical protein HMPREF9727_02697 [Treponema denticola MYR-T]
gi|448945436|gb|EMB26308.1| hypothetical protein HMPREF9727_02697 [Treponema denticola MYR-T]
gi|448952847|gb|EMB33644.1| hypothetical protein HMPREF9725_00344 [Treponema denticola H1-T]
Length = 992
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 65/163 (39%), Gaps = 21/163 (12%)
Query: 168 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
+ N +G+I + SI +L A+D N + NLG Y Q+GD + + +CF D++
Sbjct: 79 ILNNMGVIYRRLNMFNESIVILEKAKAIDSKNETTLYNLGNTYKQNGDYKHAIQCFTDVL 138
Query: 228 LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPK 287
P + Y L GSV C D A+ K LK DP
Sbjct: 139 ---DIKPDDALAYNHL-----GSVYF---------LCKDYPKALETYK----IGLKVDPN 177
Query: 288 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
+ NLA Y ++ + + A K +PN A+A
Sbjct: 178 HPFLNFNLAELYKEEKHYKEAINSYQTAMKTKPNWYEALAAIA 220
>gi|422340514|ref|ZP_16421455.1| TPR domain-containing protein [Treponema denticola F0402]
gi|325475688|gb|EGC78864.1| TPR domain-containing protein [Treponema denticola F0402]
Length = 992
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 65/163 (39%), Gaps = 21/163 (12%)
Query: 168 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
+ N +G+I + SI +L A+D N + NLG Y Q+GD + + +CF D++
Sbjct: 79 ILNNMGVIYRRLNMFNESIVILEKAKAIDSKNETTLYNLGNTYKQNGDYKHAIQCFTDVL 138
Query: 228 LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPK 287
P + Y L GSV C D A+ K LK DP
Sbjct: 139 ---DIKPDDALAYNHL-----GSVYF---------LCKDYPKALETYK----IGLKVDPN 177
Query: 288 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
+ NLA Y ++ + + A K +PN A+A
Sbjct: 178 HPFLNFNLAELYKEEKHYKEAINSYQTAMKTKPNWYEALAAIA 220
>gi|116621110|ref|YP_823266.1| hypothetical protein Acid_1991 [Candidatus Solibacter usitatus
Ellin6076]
gi|116224272|gb|ABJ82981.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 399
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 170 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 229
N LG +L+ SGR ++ +LA DP N N G AY Q D++++A F+++I +
Sbjct: 189 NNLGFVLVNSGRADEGLAQFEKILAADPANNMARVNAGFAYLQKADLDRAAVEFREVIRR 248
Query: 230 D 230
D
Sbjct: 249 D 249
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 106/260 (40%), Gaps = 38/260 (14%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC--- 128
PK++ A LGL QR G A+++Y +A + A++ L V ++ +
Sbjct: 148 PKSSEAWNQLGLSRQRTGDTAGAINAYRRAVTL---SPANLDARNNLGFVLVNSGRADEG 204
Query: 129 ------LLPESSGDNSLDKE-----LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILL 177
+L +N L+ +L+ + +E ++ D A+ LG+ L
Sbjct: 205 LAQFEKILAADPANNMARVNAGFAYLQKADLDRAAVEFREVIRRDPESAIAHYDLGIALK 264
Query: 178 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL 237
+ L+++ L+ L +DP + LGI ++QSGD +Q+A+ + I
Sbjct: 265 QKDDLEAAKLELALALKLDPQLAEAHYTLGIIHWQSGDFDQAAREMRAAI---------A 315
Query: 238 INYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 297
IN A YG GA G L Q + A+ L AA++ DP + LA
Sbjct: 316 INPA------YG------GAYFMLGTALKQNGELEAAETALRAAIRYDPANPGPYNTLAQ 363
Query: 298 AYYLTGDHRSSGKCLEKAAK 317
GD S ++ AK
Sbjct: 364 LLRQKGDLEGSRAVFQEGAK 383
>gi|42525963|ref|NP_971061.1| TPR [Treponema denticola ATCC 35405]
gi|449112904|ref|ZP_21749450.1| hypothetical protein HMPREF9735_02499 [Treponema denticola ATCC
33521]
gi|449114880|ref|ZP_21751348.1| hypothetical protein HMPREF9721_01866 [Treponema denticola ATCC
35404]
gi|41816013|gb|AAS10942.1| TPR domain protein [Treponema denticola ATCC 35405]
gi|448954323|gb|EMB35105.1| hypothetical protein HMPREF9721_01866 [Treponema denticola ATCC
35404]
gi|448955021|gb|EMB35789.1| hypothetical protein HMPREF9735_02499 [Treponema denticola ATCC
33521]
Length = 992
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 65/163 (39%), Gaps = 21/163 (12%)
Query: 168 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
+ N +G+I + SI +L A+D N + NLG Y Q+GD + + +CF D++
Sbjct: 79 ILNNMGVIYRRLNMFNESIVILEKAKAIDSKNETTLYNLGNTYKQNGDYKHAIQCFTDVL 138
Query: 228 LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPK 287
P + Y L GSV C D A+ K LK DP
Sbjct: 139 ---DIKPDDALAYNHL-----GSVYF---------LCKDYPKALETYK----IGLKVDPN 177
Query: 288 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
+ NLA Y ++ + + A K +PN A+A
Sbjct: 178 HPFLNFNLAELYKEEKHYKEAINSYQTAMKTKPNWYEALAAIA 220
>gi|182417314|ref|ZP_02948653.1| putative tetratricopeptide repeat domain containing protein
[Clostridium butyricum 5521]
gi|237667079|ref|ZP_04527063.1| tetratricopeptide repeat domain protein [Clostridium butyricum E4
str. BoNT E BL5262]
gi|182378822|gb|EDT76341.1| putative tetratricopeptide repeat domain containing protein
[Clostridium butyricum 5521]
gi|237655427|gb|EEP52983.1| tetratricopeptide repeat domain protein [Clostridium butyricum E4
str. BoNT E BL5262]
Length = 986
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 67/171 (39%), Gaps = 16/171 (9%)
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
G ++LK SI + + ++A D N D N GIA G++E++ KCF+ I D
Sbjct: 359 GFVMLKRENYIESIDLFNKVIARDDKNIDAYINKGIALKNVGNIEEAIKCFEKAIYLDDK 418
Query: 233 HPAALI-------------NYAALLLCKYGSVLAGAG---ANTGEGACLDQASAVNVAKE 276
A N +L C ++ + A + LD + A
Sbjct: 419 FAYAYFLKGTTLFENNCCENIKEILECINKAIELNSKYFEAYFNKAIILDSIERYSEAIS 478
Query: 277 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 327
L +L K ++ L Y D++ S +C +KA L+ N + Y
Sbjct: 479 ILKESLSFTDKKEQVYLQLGATYCHMNDNKKSIECFDKAISLDSNYVEAYY 529
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 96/251 (38%), Gaps = 31/251 (12%)
Query: 15 INKLGKCRSRISSKMDSALEFGVDADGDQSGL---GTSSSSREEKVSSLKTGLVHVARKM 71
++KLG+ + +F + D G+ G RE + S+ +AR
Sbjct: 329 LDKLGRVEESLK-----VFDFVIANDKSIEGIYCKGFVMLKRENYIESIDLFNKVIARD- 382
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
KN A+ G+ + +G +A+ +EKA + + A L + C
Sbjct: 383 DKNIDAYINKGIALKNVGNIEEAIKCFEKA----IYLDDKFAYAYFLKGTTLFENNCCEN 438
Query: 132 ESSGDNSLDKELE------------------PEELEEILSKLKESMQSDTRQAVVWNTLG 173
++K +E E E +S LKES+ ++ V+ LG
Sbjct: 439 IKEILECINKAIELNSKYFEAYFNKAIILDSIERYSEAISILKESLSFTDKKEQVYLQLG 498
Query: 174 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNH 233
+ SI +++D N + N GI F G++ ++ +CF ++I K+ +
Sbjct: 499 ATYCHMNDNKKSIECFDKAISLDSNYVEAYYNKGIILFSQGELNEALQCFNEIIEKNDKY 558
Query: 234 PAALINYAALL 244
+ A++L
Sbjct: 559 IEVYLERASVL 569
>gi|334121332|ref|ZP_08495403.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
gi|333455148|gb|EGK83806.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
Length = 1075
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 108/267 (40%), Gaps = 48/267 (17%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E ++ +++++ D ++ + W+ LG+ L GR +I+ L +DP LGI
Sbjct: 234 EAIAAFEKALEIDPKEHIAWHGLGITLNALGRNSEAIAAFEKALEIDPKEHIAWHGLGIT 293
Query: 210 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 269
G ++ F+ + D P A I + L G+ L G N+ A +
Sbjct: 294 LNALGRNSEAIAAFEKALEID---PKAHIAWKGL-----GNALNALGRNSEAIAAFKK-- 343
Query: 270 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP--------- 320
AL+ DPK H W L G + + EKA +++P
Sbjct: 344 -----------ALEIDPKFHHAWNGLGAPLNDLGRYSEAIAAFEKALEIDPKFHFAWHGL 392
Query: 321 -NCMST--RYAVAVSRIKDAERSQEPTEQLSW--AGNEMASILREGDPV-------QIEP 368
N ++ RY+ A++ + + +P +W GN + + R + + +I+P
Sbjct: 393 GNVLNALGRYSEAIA-VYEKALEIDPKFHFAWNGLGNALGELGRYSEAIAAYEKALEIDP 451
Query: 369 P--IAWAGFAAVQK---THHEVAAAFE 390
IAW G + ++ + E AAF+
Sbjct: 452 KFHIAWNGLGSARRGLGRNSEAIAAFD 478
>gi|94271652|ref|ZP_01291989.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
gi|93450385|gb|EAT01595.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
Length = 249
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 72/173 (41%), Gaps = 21/173 (12%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
LE+ +++++ + W LG++L + GR + +I+ S + + P NL
Sbjct: 82 LEQAEGSYRQALRLNPELVAGWYNLGVVLRRQGRYEQAIAATSRAVKLAPELVAGWYNLA 141
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 267
+ + + GD + + ++ ++ D++ AA IN L A N G+ A
Sbjct: 142 VLHGKQGDQRREIETYRRVLELDEDFVAAWIN------------LGAAHGNAGQLAA--- 186
Query: 268 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
A E L A++ P+ A W L Y R + + + +L+P
Sbjct: 187 ------AVEALEKAVQLAPRRAQAWYTLGQLYAAADRQRDAKRAWRQLRQLDP 233
>gi|186686063|ref|YP_001869259.1| hypothetical protein Npun_R6026 [Nostoc punctiforme PCC 73102]
gi|186468515|gb|ACC84316.1| Tetratricopeptide TPR_4 [Nostoc punctiforme PCC 73102]
Length = 381
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 76/190 (40%), Gaps = 21/190 (11%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
+E L+ L + E+++ + + + LGL+L + G+ ++I+ L +DP
Sbjct: 117 MEQNRLDVALQEYTEAIRINPNFSEAYYNLGLVLHRQGQKDAAITAYRQSLVIDPTKVAA 176
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 262
+ NLG+ ++ + ++ +Q I D ++ A N A
Sbjct: 177 LYNLGLVLYEQEQLPEAIAVYQQAINLDSSNANAYFNLA--------------------- 215
Query: 263 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
L Q A AL+ DP+ A + N+AN + G + +A +L P
Sbjct: 216 IALQQQGQTEQAIATYRQALQLDPQNATAYNNMANLLAIQGQASEAISVYRQAIRLNPKN 275
Query: 323 MSTRYAVAVS 332
S Y + V+
Sbjct: 276 ASAYYNLGVT 285
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 25/166 (15%)
Query: 152 LSKLKESMQSD-TRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAY 210
++ ++S+ D T+ A ++N LGL+L + +L +I+V + +D +N + NL IA
Sbjct: 160 ITAYRQSLVIDPTKVAALYN-LGLVLYEQEQLPEAIAVYQQAINLDSSNANAYFNLAIAL 218
Query: 211 FQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS- 269
Q G EQ+ ++ + D + A N A LL A QAS
Sbjct: 219 QQQGQTEQAIATYRQALQLDPQNATAYNNMANLL------------------AIQGQASE 260
Query: 270 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 315
A++V ++ A++ +PK A + NL Y GD + + L++A
Sbjct: 261 AISVYRQ----AIRLNPKNASAYYNLGVTLYNQGDIKKANGVLKRA 302
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 81/167 (48%), Gaps = 21/167 (12%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 128
R P + A++ LGL+ R GQ A+++Y ++ L+ +A L +L + + Q
Sbjct: 134 RINPNFSEAYYNLGLVLHRQGQKDAAITAYRQS---LVIDPTKVA--ALYNLGLVLYEQE 188
Query: 129 LLPE------------SSGDN---SLDKELEPE-ELEEILSKLKESMQSDTRQAVVWNTL 172
LPE SS N +L L+ + + E+ ++ ++++Q D + A +N +
Sbjct: 189 QLPEAIAVYQQAINLDSSNANAYFNLAIALQQQGQTEQAIATYRQALQLDPQNATAYNNM 248
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 219
+L G+ +ISV + ++P N NLG+ + GD++++
Sbjct: 249 ANLLAIQGQASEAISVYRQAIRLNPKNASAYYNLGVTLYNQGDIKKA 295
>gi|355571187|ref|ZP_09042439.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanolinea
tarda NOBI-1]
gi|354825575|gb|EHF09797.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanolinea
tarda NOBI-1]
Length = 336
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 82/208 (39%), Gaps = 17/208 (8%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
+ ++Q D A WN G L + GR + ++ + ++ P N G A+ +
Sbjct: 123 ERAIQLDPSNARAWNARGHTLGELGRFEDELTCTAIATSLRPRYVGAWVNRGYAFLKLRR 182
Query: 216 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV---------------LAGAGANTG 260
++ +CF + +A I + C+ G L+GA
Sbjct: 183 FGEALECFSRALSIYPGFSSAWI-LKGIASCELGRFRDAVSCFARAEESRPLSGARNLYW 241
Query: 261 EGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
+G L + A L ++ DP+ W L+N Y+LTG+ S +C A L+
Sbjct: 242 KGLALSRTGMRKDAIRILEGVVREDPRHVDAWIELSNCYFLTGEIEESVRCFMVAYGLDK 301
Query: 321 NCMSTRYAVAVSRIKDAERSQEPTEQLS 348
+ + AV+ +K+ R +E LS
Sbjct: 302 ESIRDCLSRAVTLLKEG-RKEEGLRSLS 328
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 75/232 (32%), Gaps = 35/232 (15%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
E+ L+ ++Q D W G L K GR + I LA+DP N + N G
Sbjct: 48 EDALALFSRALQEDPTYVPAWVASGFALGKLGRFREEIKACDQALALDPQNVEAWINRGF 107
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
A + + C + I D ++ A A G L +
Sbjct: 108 ALGKLLRFSEKLVCCERAIQLDPSN---------------------ARAWNARGHTLGEL 146
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP-------- 320
C A P+ W N A+ + +C +A + P
Sbjct: 147 GRFEDELTCTAIATSLRPRYVGAWVNRGYAFLKLRRFGEALECFSRALSIYPGFSSAWIL 206
Query: 321 ----NCMSTRYAVAVSRIKDAERSQEPT--EQLSWAGNEMASILREGDPVQI 366
+C R+ AVS AE S+ + L W G ++ D ++I
Sbjct: 207 KGIASCELGRFRDAVSCFARAEESRPLSGARNLYWKGLALSRTGMRKDAIRI 258
>gi|196233636|ref|ZP_03132477.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
gi|196222306|gb|EDY16835.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
Length = 752
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 111/266 (41%), Gaps = 42/266 (15%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEIL-----------LRCEADIARPELLSL 120
P A AH LG + G+ +A++++++A E+ L +A R E L+
Sbjct: 105 PDYAQAHHNLGSALAKRGRFDEAIAAFQRAIELKPDYASAYNNLGLALKAQARRDEALAA 164
Query: 121 VQIHHAQCLLPESSG-----DNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLI 175
Q A L P+ + N + P+E ++ + +++ + A N LG+
Sbjct: 165 FQ--QAIALQPDHAEAHFNLGNIFREWARPQE---AMTAFRRALEINPDYADALNNLGIT 219
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
L +GRL +I+ L ++P + NLG A F+ ++++A F+
Sbjct: 220 LADAGRLDEAIACYRRALQINPAGAETNTNLGNALFELQRLDEAAAAFR----------- 268
Query: 236 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 295
A+I L Y ++ G L + A+N A L AL +P +A NL
Sbjct: 269 AVIELKPDLAQAYNNL----------GNALREQGALNEASAEFLHALAIEPNSADFHNNL 318
Query: 296 ANAYYLTGDHRSSGKCLEKAAKLEPN 321
NA G+ ++ +A +L P+
Sbjct: 319 GNALKDRGEIDAALDAYRRAMELAPD 344
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 104/274 (37%), Gaps = 56/274 (20%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHH--AQCL 129
P++ AHF LG LG+ +A ++ +A E+ + D A Q HH L
Sbjct: 71 PQHVAAHFNLGNALSELGRMEEAADAFGRATEL----QPDYA--------QAHHNLGSAL 118
Query: 130 LPESSGDNSLDK-----ELEPE----------------ELEEILSKLKESMQSDTRQAVV 168
D ++ EL+P+ +E L+ ++++ A
Sbjct: 119 AKRGRFDEAIAAFQRAIELKPDYASAYNNLGLALKAQARRDEALAAFQQAIALQPDHAEA 178
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
LG I + R Q +++ L ++P+ D + NLGI +G ++++ C++ +
Sbjct: 179 HFNLGNIFREWARPQEAMTAFRRALEINPDYADALNNLGITLADAGRLDEAIACYRRAL- 237
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
Q +P AGA NT G L + ++ A A ++ P
Sbjct: 238 --QINP------------------AGAETNTNLGNALFELQRLDEAAAAFRAVIELKPDL 277
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
A + NL NA G + A +EPN
Sbjct: 278 AQAYNNLGNALREQGALNEASAEFLHALAIEPNS 311
>gi|218782228|ref|YP_002433546.1| hypothetical protein Dalk_4399 [Desulfatibacillum alkenivorans
AK-01]
gi|218763612|gb|ACL06078.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
alkenivorans AK-01]
Length = 268
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 22/190 (11%)
Query: 155 LKESMQS---DTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
L+E +++ D + V + LGL+LL GR Q ++ + ++P + NLG AY
Sbjct: 66 LREFLKAEALDPQDVEVQDYLGLVLLTLGRPQEAVEHFQRAVDLNPGYLNAQNNLGCAYL 125
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 271
+ + +++ + F+DL L + +P K + L A N G+ +
Sbjct: 126 ELAEWDKAIEVFKDL-LANLTYPTPW---------KPAANLGWAYFNKGD---------M 166
Query: 272 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 331
+ A E L ++ P A W L Y TG+ + + LEKA P Y +
Sbjct: 167 DAALEYYLMSVDQSPNYAIGWRGLGQVYMETGNPQKAVISLEKALVAAPQFAEAYYDLGE 226
Query: 332 SRIKDAERSQ 341
+ ++ R++
Sbjct: 227 AYLRTGLRTK 236
>gi|326430069|gb|EGD75639.1| TPR repeat-containing protein [Salpingoeca sp. ATCC 50818]
Length = 598
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 110/274 (40%), Gaps = 30/274 (10%)
Query: 67 VARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHA 126
+ K P A+ + LGL Y G+ KA++ YEKA I + + P S Q ++
Sbjct: 200 LGEKHPSTANTYGNLGLAYYSKGEYDKAIAFYEKALAIRVETLGE-KHP---STAQTYNN 255
Query: 127 QCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSI 186
+ S GD DK + E + + K++ A+ +N LG+ G +I
Sbjct: 256 LGIAYHSKGD--YDKAIAYHE-KALAIKVETLGAKHPSTAITYNNLGIAFKNKGDYDRAI 312
Query: 187 SVLSSLLAVD--------PNNCDCIGNLGIAYFQSGDMEQSAKCFQ-DLILK----DQNH 233
+ LA+ P+ NLGIA+ GD +++ ++ DL + + H
Sbjct: 313 AFYEKDLAITVEALGEKHPSTAQTYNNLGIAFKNKGDYDRAIAFYEKDLAITVETLGEKH 372
Query: 234 PAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWA 293
P+ Y L GS G A ++A A+ A + P A +
Sbjct: 373 PSTASTYNNL-----GSAYYSKGEYDRAIALYEKALAITAE-----ALGEKHPSTAQTYN 422
Query: 294 NLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 327
NL AY G++ + + E+A ++ + ++
Sbjct: 423 NLGAAYADKGEYDKAVEVYEQALAIKVEALGEKH 456
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 101/251 (40%), Gaps = 38/251 (15%)
Query: 81 LGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLD 140
+GL+ ++ G+ +A++ YE A + LR E + R ++ +++ + G+ D
Sbjct: 130 VGLVLKQFGEHDRAIAYYETALAVYLRTEGEKGR----NVAALYNNLGIAYSDKGE--YD 183
Query: 141 KELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAV----- 195
K + E + + K++ + A + LGL G +I+ LA+
Sbjct: 184 KAIVFYE-KALAIKVETLGEKHPSTANTYGNLGLAYYSKGEYDKAIAFYEKALAIRVETL 242
Query: 196 ---DPNNCDCIGNLGIAYFQSGDMEQSAKCFQD-LILKDQN----HPAALINYAALLLCK 247
P+ NLGIAY GD +++ + L +K + HP+ I Y L +
Sbjct: 243 GEKHPSTAQTYNNLGIAYHSKGDYDKAIAYHEKALAIKVETLGAKHPSTAITYNNLGI-- 300
Query: 248 YGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKA----DPKAAHIWANLANAYYLTG 303
A N G D A+ ++ L ++A P A + NL A+ G
Sbjct: 301 -------AFKNKG-----DYDRAIAFYEKDLAITVEALGEKHPSTAQTYNNLGIAFKNKG 348
Query: 304 DHRSSGKCLEK 314
D+ + EK
Sbjct: 349 DYDRAIAFYEK 359
>gi|449107783|ref|ZP_21744430.1| hypothetical protein HMPREF9722_00126 [Treponema denticola ATCC
33520]
gi|448962734|gb|EMB43421.1| hypothetical protein HMPREF9722_00126 [Treponema denticola ATCC
33520]
Length = 992
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 65/163 (39%), Gaps = 21/163 (12%)
Query: 168 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
+ N +G+I + SI +L A+D N + NLG Y Q+GD + + +CF D++
Sbjct: 79 ILNNMGVIYRRLNMFNESIVILEKAKAIDSKNETTLYNLGNTYKQNGDYKHAIQCFTDVL 138
Query: 228 LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPK 287
P + Y L GSV C D A+ K LK DP
Sbjct: 139 ---DIKPDDALAYNHL-----GSVYF---------LCKDYPKALETYK----IGLKVDPN 177
Query: 288 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
+ NLA Y ++ + + A K +PN A+A
Sbjct: 178 HPFLNFNLAELYKEERHYKEAINSYQTAIKTKPNWYEALAAIA 220
>gi|406952433|gb|EKD82044.1| hypothetical protein ACD_39C01506G0001, partial [uncultured
bacterium]
Length = 994
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 82/397 (20%), Positives = 154/397 (38%), Gaps = 66/397 (16%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A ++ LG +YQ + + KA+++ KA E DI E A +
Sbjct: 2 PNFAQGYYELGRVYQDINENEKALANLRKA------VELDIDYTE---------AHFAIG 46
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
S + + D E +L +++ LGL+ ++GR Q +I +S
Sbjct: 47 RISFEENQD--------ETARIRLTRTIELAPAHDQAHYYLGLLHHRNGRYQQAIDEFNS 98
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 251
+A+ P +L + Y SG+ +++ + ++ + + A+I YA
Sbjct: 99 AIALSPKPSRIQFDLAMLYADSGNWQEAKTILEKVLEHEHDFIDAIIQYAI--------- 149
Query: 252 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 311
L+ + A+E L A++ P+ NLA Y T +
Sbjct: 150 ------------TLEHLEMLKEAEEEYLRAIELQPEGLRAHENLARLYESTNQIYKAEDE 197
Query: 312 LEKAAKLEPNCMSTRYAVA-VSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPI 370
K +++PN ++ + ++A + I+D A N + ++ V IEP I
Sbjct: 198 FRKVVEIKPNHVAAQMSLAKIYIIRDLHDK---------ALNALHTV------VDIEPEI 242
Query: 371 AWAGFAAVQKTHHEVA--AAFETEENELSKMEECAGAG---ESAFLDQASAVNVAKECLL 425
A + HH A + E+ ++ + E A +L + +E L
Sbjct: 243 FEAHLELGRIYHHHNALEKSVESYKSAIRIRAEAPQAHVELAEVYLAMEKSARAIEEYKL 302
Query: 426 AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVL 462
A L+ DP A ANL + Y ++ + +G C +++
Sbjct: 303 A-LEIDPSLAEALANLGDLYNMSEQYELAGNCYRRLV 338
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 82/406 (20%), Positives = 154/406 (37%), Gaps = 88/406 (21%)
Query: 17 KLGKCRSRIS------SKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLKTGLVHVARK 70
+LG+ I+ + + A+E +D +G S E + + + L
Sbjct: 10 ELGRVYQDINENEKALANLRKAVELDIDYTEAHFAIGRISFE-ENQDETARIRLTRTIEL 68
Query: 71 MPKNAHAHFLLGLMYQRLGQPLKAVSSY---------------------------EKAEE 103
P + AH+ LGL++ R G+ +A+ + ++A+
Sbjct: 69 APAHDQAHYYLGLLHHRNGRYQQAIDEFNSAIALSPKPSRIQFDLAMLYADSGNWQEAKT 128
Query: 104 IL---LRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELE--EILSKLKES 158
IL L E D + + + H + +L E+ + EL+PE L E L++L ES
Sbjct: 129 ILEKVLEHEHDFIDAIIQYAITLEHLE-MLKEAEEEYLRAIELQPEGLRAHENLARLYES 187
Query: 159 M------QSDTRQAV--------VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIG 204
+ + R+ V +L I + +++ L +++ ++P +
Sbjct: 188 TNQIYKAEDEFRKVVEIKPNHVAAQMSLAKIYIIRDLHDKALNALHTVVDIEPEIFEAHL 247
Query: 205 NLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGAC 264
LG Y +E+S + ++ I P A + A + L A
Sbjct: 248 ELGRIYHHHNALEKSVESYKSAIRIRAEAPQAHVELAEVYL-----------------AM 290
Query: 265 LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS 324
A A+ K AL+ DP A ANL + Y ++ + +G C + +++P S
Sbjct: 291 EKSARAIEEYK----LALEIDPSLAEALANLGDLYNMSEQYELAGNCYRRLVEMDPQNHS 346
Query: 325 TRYAVAVS-------------RIKDAERSQEPTEQLSWAGNEMASI 357
R+ +A + +K AE ++E T+ L G AS+
Sbjct: 347 ARFRLAETCYHCGQLEKALDEYLKVAEINEERTDALIRLGKIYASL 392
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 107/278 (38%), Gaps = 44/278 (15%)
Query: 65 VHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQI- 123
V V P+N+ H LG +Y L + A+ +E A E + PE+L+ + +
Sbjct: 403 VRVFETDPQNSLIHLELGKVYDHLNRLTDALREFEAA------LEREPNNPEILTQIGLM 456
Query: 124 HHAQCLLP----------ESSGDNSL-DKEL-----EPEELEEILSKLKESMQSDTRQAV 167
H Q L + G N L +EL +++ + + KE++ + V
Sbjct: 457 HRKQGNLDMAIERFNRAIQIDGSNPLPHRELAMAYINKGRVDKAIGEFKEALNYEPSNIV 516
Query: 168 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
V L G + ++ ++ +DP N + LGI Y G + + F+ +I
Sbjct: 517 VNIELAKAYASQGIIDDAVDSYRKVIGLDPRNSNAHFELGIIYSTQGLNDNAISEFKTVI 576
Query: 228 LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPK 287
+H A + G L V+ A + L A + DP+
Sbjct: 577 GLSPDHKRAHLEL---------------------GRHLRDTGRVDEAIDELRKASQLDPE 615
Query: 288 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
A I+ L + YY +++ + ++A +L+ + +
Sbjct: 616 NAVIYYELGDVYYQRDEYQDALVKFKRALELQDDYVDV 653
>gi|224123642|ref|XP_002319130.1| predicted protein [Populus trichocarpa]
gi|222857506|gb|EEE95053.1| predicted protein [Populus trichocarpa]
Length = 923
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 101/261 (38%), Gaps = 36/261 (13%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
PK A+ LG +Y+ LG P +A+ Y++A + ARP+
Sbjct: 203 PKFPDAYLNLGNVYKALGMPQEAIVCYQQAVQ---------ARPKY-------------- 239
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+ N E +L+ + K+++ D R +N LG L GR+ +I +
Sbjct: 240 AMAFGNLASTYYERGQLDLAILHYKQAIACDQRFLEAYNNLGNALKDVGRVDEAIQCYNQ 299
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL------- 244
L++ PN+ + NLG Y + +A C++ + A N A +
Sbjct: 300 CLSLQPNHPQALTNLGNIYMEWNMSAAAASCYKATLAVTTGLSAPFSNLAVIYKQQGNYS 359
Query: 245 --LCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANA 298
+ Y VL A G + V+ A + + A+ P A ANLA+A
Sbjct: 360 DAISCYNEVLRIEPLAADGLVNRGNTYKEIGRVSEAIQDYINAITIRPNMAEAHANLASA 419
Query: 299 YYLTGDHRSSGKCLEKAAKLE 319
Y +G ++ K KA L
Sbjct: 420 YKDSGHVEAAIKSYRKALLLR 440
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 21/175 (12%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
++ + ++K +E+++ + R A + + + G + +I + + PN D N
Sbjct: 50 QDYDMCIAKNEEALRLEPRFAECYGNMANAWKEKGDIDLAIRYYLVSIELRPNFADAWSN 109
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
L AY + G + ++++C + AL L + L A +N G +
Sbjct: 110 LASAYMRKGRLNEASQCCRQ----------------ALTLNPH---LVDAHSNLGN--LM 148
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
V A C L AL+ P A W+NLA + +GD + + ++A KL+P
Sbjct: 149 KAQGLVQEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKP 203
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 112/277 (40%), Gaps = 37/277 (13%)
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
L KSG + ++ S + P D + LG Y+Q D + I K++
Sbjct: 12 LYKSGNYKQALEHSSVVYERSPQRTDNLLLLGAIYYQLQDYDMC-------IAKNEE--- 61
Query: 236 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 295
AL C YG+ +A A G+ +++A L +++ P A W+NL
Sbjct: 62 ALRLEPRFAEC-YGN-MANAWKEKGD---------IDLAIRYYLVSIELRPNFADAWSNL 110
Query: 296 ANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMA 355
A+AY G + +C +A L P+ + A S + + ++Q + E
Sbjct: 111 ASAYMRKGRLNEASQCCRQALTLNPHLVD-----AHSNLGNLMKAQGLVQ-------EAY 158
Query: 356 SILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQAS 415
S E +Q IAW+ A + ++ A + + E K++ +
Sbjct: 159 SCYLEALRIQPTFAIAWSNLAGLFMESGDLNRALQYYK-EAVKLKPKFPDAYLNLGNVYK 217
Query: 416 AVNVAKE---CLLAALKADPKAAHIWANLANAYYLTG 449
A+ + +E C A++A PK A + NLA+ YY G
Sbjct: 218 ALGMPQEAIVCYQQAVQARPKYAMAFGNLASTYYERG 254
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 33/172 (19%), Positives = 68/172 (39%), Gaps = 21/172 (12%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E + ++++Q+ + A+ + L + G+L +I +A D + NLG
Sbjct: 223 QEAIVCYQQAVQARPKYAMAFGNLASTYYERGQLDLAILHYKQAIACDQRFLEAYNNLGN 282
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
A G ++++ +C+ + NHP AL N + + +
Sbjct: 283 ALKDVGRVDEAIQCYNQCLSLQPNHPQALTNLGNIYM---------------------EW 321
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
+ A C A L + ++NLA Y G++ + C + ++EP
Sbjct: 322 NMSAAAASCYKATLAVTTGLSAPFSNLAVIYKQQGNYSDAISCYNEVLRIEP 373
>gi|428218502|ref|YP_007102967.1| hypothetical protein Pse7367_2276 [Pseudanabaena sp. PCC 7367]
gi|427990284|gb|AFY70539.1| Tetratricopeptide TPR_1 repeat-containing protein [Pseudanabaena
sp. PCC 7367]
Length = 418
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 15/182 (8%)
Query: 171 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 230
LGL ++G+LQ +I+ +DP NLG A Q G+ +Q+ FQ I
Sbjct: 200 NLGLAFAQTGQLQEAINAFFRAAELDPTFPMTFSNLGAALLQGGNPQQAVAYFQRAIELK 259
Query: 231 QNHPAALINYAALLLCKYGSVLAGAGA--------------NTGEGACLDQASAVNVAKE 276
+ P A N + + G + + N G + ++ ++ A +
Sbjct: 260 PDLPIAHYNL-GIAYKEQGQITEAIASLREAQKLYPQSPETNYNLGLLVQESGDLDEAIK 318
Query: 277 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKD 336
AAL+ +P A NL A+ L + L+KA +L PN + + V+R K
Sbjct: 319 LYQAALEINPNYAQARYNLGAAFLLQEKMDQAIAELQKATQLRPNYADAFFTLGVARAKQ 378
Query: 337 AE 338
+
Sbjct: 379 GQ 380
>gi|381150819|ref|ZP_09862688.1| tetratricopeptide repeat protein [Methylomicrobium album BG8]
gi|380882791|gb|EIC28668.1| tetratricopeptide repeat protein [Methylomicrobium album BG8]
Length = 534
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 79/184 (42%), Gaps = 22/184 (11%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A HF LG++ +L P AV+SY KA + L+ A L +L+Q Q
Sbjct: 77 PGIAEIHFNLGVLQTQLNDPKAAVASYRKA--LQLKPALPSAHFNLGALLQ---GQGFPK 131
Query: 132 ESSGDNSLDKELEPEELE---------EILSKLKESMQSDTRQAVVWN-------TLGLI 175
E++ +LEP E + KL+E+ Q RQA+ + LG +
Sbjct: 132 EAAQHYRKAADLEPRFFEAHGNLGTVLQQQGKLEEAKQC-YRQALAIHADAQGRFNLGTV 190
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
L GR Q +I + +DP D +LG G+ME++ +C++ + H
Sbjct: 191 LYGLGRHQEAIEEFGEAVNLDPQFADAWNSLGETLRDRGEMEEAVRCYERALAAQPEHGR 250
Query: 236 ALIN 239
A N
Sbjct: 251 ARYN 254
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 74/207 (35%), Gaps = 46/207 (22%)
Query: 167 VVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDL 226
V++N +GL + G+L+ + + L+A+DP + NLG+ Q D + + ++
Sbjct: 47 VLYNVIGLCQQRQGKLKEAAASFRKLVAIDPGIAEIHFNLGVLQTQLNDPKAAVASYRKA 106
Query: 227 ILKDQNHPAALINYAALLLCK--------------------------YGSVLAGAGANTG 260
+ P+A N ALL + G+VL G
Sbjct: 107 LQLKPALPSAHFNLGALLQGQGFPKEAAQHYRKAADLEPRFFEAHGNLGTVLQQQGKLEE 166
Query: 261 EGACLDQASAVNV--------------------AKECLLAALKADPKAAHIWANLANAYY 300
C QA A++ A E A+ DP+ A W +L
Sbjct: 167 AKQCYRQALAIHADAQGRFNLGTVLYGLGRHQEAIEEFGEAVNLDPQFADAWNSLGETLR 226
Query: 301 LTGDHRSSGKCLEKAAKLEPNCMSTRY 327
G+ + +C E+A +P RY
Sbjct: 227 DRGEMEEAVRCYERALAAQPEHGRARY 253
>gi|421131808|ref|ZP_15591985.1| tetratricopeptide repeat protein [Leptospira kirschneri str.
2008720114]
gi|410356744|gb|EKP04050.1| tetratricopeptide repeat protein [Leptospira kirschneri str.
2008720114]
Length = 368
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E + K +++SD ++ + +LG + SG +S+I S L +DP+ D NLGI+
Sbjct: 185 EAIHLFKNAIKSDPEYSLSYLSLGYLYDSSGDFKSAIRYYKSALKIDPDYPDVWNNLGIS 244
Query: 210 YFQSGDMEQSAKCFQDLI 227
Y+ G +E S F+ I
Sbjct: 245 YYNDGQIENSISHFEKAI 262
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 26/169 (15%)
Query: 82 GLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPEL-LSLVQIHHAQCLLPESSGDNSLD 140
G +Y LG+ +A+ ++ A ++D PE LS + + + L +SSGD
Sbjct: 174 GWIYFYLGKSAEAIHLFKNA------IKSD---PEYSLSYLSLGY----LYDSSGD---- 216
Query: 141 KELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNC 200
+ + K +++ D VWN LG+ G++++SIS + ++P
Sbjct: 217 -------FKSAIRYYKSALKIDPDYPDVWNNLGISYYNDGQIENSISHFEKAIQLNPTFA 269
Query: 201 DCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL-INYAALLLCKY 248
+ NLG Y Q D + K F I P L +A L +C Y
Sbjct: 270 YPVNNLGFIYIQKDDFSDAKKYFLRSIELKPLEPFLLGETFAGLSICNY 318
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 88/234 (37%), Gaps = 43/234 (18%)
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL------- 244
LL P + N+G YF GD + S F ++ N+ A NY L
Sbjct: 87 LLPDVPYKYEIYNNIGACYFYIGDYKNSLHYFNLSKTENPNYKIAEKNYILLQNAISVKN 146
Query: 245 LCKYGS----------VLAGAGANTGEGACL----DQASAVNVAKECLLAALKADPKAAH 290
L K S V++ A A+ G A A+++ K A+K+DP+ +
Sbjct: 147 LEKLESTRENFPDTFLVVSSASADISTGWIYFYLGKSAEAIHLFKN----AIKSDPEYSL 202
Query: 291 IWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWA 350
+ +L Y +GD +S+ + + A K++P+ + +S D
Sbjct: 203 SYLSLGYLYDSSGDFKSAIRYYKSALKIDPDYPDVWNNLGISYYND-------------- 248
Query: 351 GNEMASILREGDPVQIEPPIAWA----GFAAVQKTHHEVAAAFETEENELSKME 400
G SI +Q+ P A+ GF +QK A + EL +E
Sbjct: 249 GQIENSISHFEKAIQLNPTFAYPVNNLGFIYIQKDDFSDAKKYFLRSIELKPLE 302
>gi|406980633|gb|EKE02207.1| hypothetical protein ACD_20C00411G0008 [uncultured bacterium]
Length = 598
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 68/165 (41%), Gaps = 11/165 (6%)
Query: 157 ESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 216
++++ + R +N LG++ +I L ++ + NLG +F+ +
Sbjct: 96 KTIELNPRNLDAYNNLGMVYTAKEMFDDAIICYQKALEINSGYPEIYNNLGSVFFEVNKI 155
Query: 217 EQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKE 276
EQ+ KC++ I + N+ A N G+ G N +D ++ A
Sbjct: 156 EQAIKCYEKAIELNPNYTQAYFN--------IGNAYKG---NDNFVRKIDNPEHLDKAVS 204
Query: 277 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
AL+ P A ++ NL Y+ G C +KA +L+P+
Sbjct: 205 YYQKALELMPDFADVYINLGKVYFYKGYTDKELSCYQKALELKPD 249
>gi|390440633|ref|ZP_10228859.1| conserved hypothetical protein [Microcystis sp. T1-4]
gi|389836095|emb|CCI32985.1| conserved hypothetical protein [Microcystis sp. T1-4]
Length = 607
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 74/186 (39%), Gaps = 21/186 (11%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+LEE ++ ++ + + A W+ LG+I+ G++ +I L ++PN + NL
Sbjct: 408 KLEEAIALYQQLINQHPQYAADWHQLGVIMDSLGQIDQAILAYKQALLINPNYAETHNNL 467
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
GI G+++++ CF I +QN+ A A G L
Sbjct: 468 GIIAVSKGNLDEAIICFNQAIRSNQNY---------------------AFAENNLGLVLQ 506
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
+ A A++ +P NL N L G + + A KL P +
Sbjct: 507 MQDKLGDAAVKFQEAIRKNPNYPEAHFNLGNVLQLQGKTEEAIAYFQTAIKLNPKYIKAY 566
Query: 327 YAVAVS 332
++A++
Sbjct: 567 NSLALA 572
>gi|405965071|gb|EKC30496.1| Tetratricopeptide repeat protein 37 [Crassostrea gigas]
Length = 1452
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 36/232 (15%)
Query: 179 SGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQ-SGDMEQSAKCFQDLILKDQNHPAA- 236
S LQ+ + L +DP + + LG Y + D + +C+Q D+N+ A
Sbjct: 467 SNNLQTCYTALLKSAKLDPYSSEPFEYLGRFYTEIQKDKGKGKRCYQKAFDLDRNNDKAG 526
Query: 237 -----LIN--------YAALLLCKYGSVLAGAGANTGEGACLD------QASAVNVAKEC 277
L+ Y LL SV + A A + A L + ++VA
Sbjct: 527 EALCDLMTELGEEEDAYQLLL-----SVTSSASAGCCKWAWLRLGLHQVKHDTISVAISS 581
Query: 278 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDA 337
+AL+ADPK H++ LA AYY G + ++ K KA++L P + + + +A IK
Sbjct: 582 FQSALRADPKDPHVFECLAEAYYKRGSYTAALKAFIKASELNPKSLYSLFMIAC--IKQT 639
Query: 338 ERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAF 389
R LS A + IL EG P + P + G V + H ++ F
Sbjct: 640 LRV------LSEAVDNYKHIL-EGSPNYV-PALKGLGETYVLQAKHHLSQGF 683
>gi|392374236|ref|YP_003206069.1| hypothetical protein DAMO_1174 [Candidatus Methylomirabilis
oxyfera]
gi|258591929|emb|CBE68234.1| protein of unknown function [Candidatus Methylomirabilis oxyfera]
Length = 352
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 78/190 (41%), Gaps = 20/190 (10%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+++ ++LK D V WN LG++ K GR +I+ L + + P + D NLG
Sbjct: 82 DQVGTELKAKADQDGADFVSWNLLGVLYAKQGRWAEAIAALERTVQIQPADVDAWTNLG- 140
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
+ S +++QS K + A L YG AG G +
Sbjct: 141 --WLSSELKQSQKARE------------AFRRALALDSAYGRAHAGLA-----GLYAETE 181
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 328
+ A E AL A+P + ++ YY G + K L +A+ L P+ + R
Sbjct: 182 GEYDKAIEEYRLALAAEPGNSDYLYDMGWVYYRKGMTDDALKILTEASTLSPDDPAGRTK 241
Query: 329 VAVSRIKDAE 338
+ +R++ E
Sbjct: 242 IGWARLRRKE 251
>gi|293334567|ref|NP_001167956.1| uncharacterized protein LOC100381672 [Zea mays]
gi|223945123|gb|ACN26645.1| unknown [Zea mays]
Length = 1009
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 79/195 (40%), Gaps = 14/195 (7%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
+ ++Q+ A+ + L I + G+L +I + + DP + N+G A +G
Sbjct: 313 QRALQARPDYAMAYGNLATIYYEQGQLDMAIRCYNQAIVYDPQFIEAYNNMGNALKDAGR 372
Query: 216 MEQSAKCFQDLILKDQNHPAALINYAALLL------CKYGSVLAGAGANTGEGACLDQAS 269
+E++ C++ + NHP AL N + + A +G + L+ +
Sbjct: 373 VEEAINCYRSCLALQANHPQALTNLGNIYMEWNMISAATSFYKAAISVTSGLSSPLNNLA 432
Query: 270 AV-----NVAK--ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
+ N A C L+ DP AA N N + G + + +AA + PN
Sbjct: 433 VIYKQQGNYADAITCYTEVLRIDPTAADALVNRGNTFKEIGRVNEAIQDYVQAATIRPN- 491
Query: 323 MSTRYAVAVSRIKDA 337
M +A S KD+
Sbjct: 492 MPEAHANLASAYKDS 506
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 21/169 (12%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
++K +E++ D A + + + G + +I + + + PN CD NL AY
Sbjct: 139 IAKNEEALAIDPHFAECYGNMANAWKEKGDIDLAIRYYLTAIQLRPNFCDAWSNLASAYT 198
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 271
+ G + ++A+C + A IN L A +N G + +
Sbjct: 199 RKGRLNEAAQCCRQ---------ALAIN----------PRLVDAHSNLGN--LMKAQGFI 237
Query: 272 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
A C + AL+ DP A W+NLA + GD + ++A KL+P
Sbjct: 238 QEAYSCYIEALRIDPHFAIAWSNLAGLFMEAGDLDKALMYYKEAVKLKP 286
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 108/292 (36%), Gaps = 65/292 (22%)
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
LG I + I+ LA+DP+ +C GN+ A+ + GD++ + + + I
Sbjct: 125 LGAIYYQIRNYDMCIAKNEEALAIDPHFAECYGNMANAWKEKGDIDLAIRYYLTAIQLRP 184
Query: 232 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 291
N C S LA A G +N A +C AL +P+
Sbjct: 185 N------------FCDAWSNLASAYTRKGR---------LNEAAQCCRQALAINPRLVDA 223
Query: 292 WANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAG 351
+NL N G + + C +A +++P+ +A+A S + AG
Sbjct: 224 HSNLGNLMKAQGFIQEAYSCYIEALRIDPH-----FAIAWSNLAGL---------FMEAG 269
Query: 352 NEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFL 411
+ +++ + V+++P A A+ + N + G + A +
Sbjct: 270 DLDKALMYYKEAVKLKP---------------SFADAYLNQGNVYKAL----GMPQDAIM 310
Query: 412 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLM 463
C AL+A P A + NLA YY G + +C + ++
Sbjct: 311 -----------CYQRALQARPDYAMAYGNLATIYYEQGQLDMAIRCYNQAIV 351
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 76/187 (40%), Gaps = 22/187 (11%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
++++ + R + LG ++ G +Q + S L +DP+ NL + ++GD
Sbjct: 211 RQALAINPRLVDAHSNLGNLMKAQGFIQEAYSCYIEALRIDPHFAIAWSNLAGLFMEAGD 270
Query: 216 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 275
++++ +++ + + A +N G+V G A
Sbjct: 271 LDKALMYYKEAVKLKPSFADAYLN--------QGNVYKALGMPQD-------------AI 309
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 335
C AL+A P A + NLA YY G + +C +A +P + Y + +K
Sbjct: 310 MCYQRALQARPDYAMAYGNLATIYYEQGQLDMAIRCYNQAIVYDPQFIEA-YNNMGNALK 368
Query: 336 DAERSQE 342
DA R +E
Sbjct: 369 DAGRVEE 375
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 109/272 (40%), Gaps = 54/272 (19%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL----SLVQIHHAQ 127
P A A+ G +Y+ LG P A+ Y++A + ARP+ +L I++ Q
Sbjct: 286 PSFADAYLNQGNVYKALGMPQDAIMCYQRALQ---------ARPDYAMAYGNLATIYYEQ 336
Query: 128 CLL--------------PES-SGDNSLDKEL-EPEELEEILSKLKE--SMQSDTRQAVVW 169
L P+ N++ L + +EE ++ + ++Q++ QA+
Sbjct: 337 GQLDMAIRCYNQAIVYDPQFIEAYNNMGNALKDAGRVEEAINCYRSCLALQANHPQALT- 395
Query: 170 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 229
LG I ++ + ++ S + ++V + NL + Y Q G+ + C+ +++
Sbjct: 396 -NLGNIYMEWNMISAATSFYKAAISVTSGLSSPLNNLAVIYKQQGNYADAITCYTEVLRI 454
Query: 230 DQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAA 289
D AL+N G + VN A + + A P
Sbjct: 455 DPTAADALVN---------------------RGNTFKEIGRVNEAIQDYVQAATIRPNMP 493
Query: 290 HIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
ANLA+AY +G ++ ++A +L P+
Sbjct: 494 EAHANLASAYKDSGHVETAIISYKQALRLRPD 525
>gi|170738881|ref|YP_001767536.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
4-46]
gi|168193155|gb|ACA15102.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
4-46]
Length = 1056
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 69/177 (38%), Gaps = 23/177 (12%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+ + + +++Q + + + +N G + G +I+ +S L +DP + N
Sbjct: 245 QYDSAIENYNQALQLNPKSKIAYNNRGFVFYNKGEYDRAIADYNSALQIDPRYVVALVNR 304
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAAL-INYAALLLCKYGSVLAGAGANTGEGACL 265
G A+ GD +++ + D H + NYA A G G L
Sbjct: 305 GDAFVSKGDYDRA--------IGDYGHALQINPNYAF--------------AYNGRGVAL 342
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
+ A AL+ DPK +AN +A+ G+H + +A +L PN
Sbjct: 343 QNKGEYDRAIMDYDQALRLDPKYVFAFANRGDAFRSKGEHDVAIADYNQALRLSPNY 399
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 59/309 (19%), Positives = 112/309 (36%), Gaps = 65/309 (21%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
EE + ++ ++++ D + G G +I+ + +L +DP +
Sbjct: 139 FSKEEYDRAIADYNQALRLDPKYLSAALNRGDAFRSKGEYDRAIADYNQVLQIDPRSVVS 198
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 262
N G+A+ G+ +++ + + D + ALIN + K
Sbjct: 199 YNNRGLAFQGKGEYDRAVADYNQALTLDPGYTIALINRGDVFRIK--------------- 243
Query: 263 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
+ A E AL+ +PK+ + N +Y G++ + A +++P
Sbjct: 244 ------GQYDSAIENYNQALQLNPKSKIAYNNRGFVFYNKGEYDRAIADYNSALQIDP-- 295
Query: 323 MSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTH 382
RY VA+ DA S+ G+ +I G +QI P A+A +
Sbjct: 296 ---RYVVALVNRGDAFVSK---------GDYDRAIGDYGHALQINPNYAFA--------Y 335
Query: 383 HEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLA 442
+ A + + G + A +D AL+ DPK +AN
Sbjct: 336 NGRGVALQNK-----------GEYDRAIMDYDQ-----------ALRLDPKYVFAFANRG 373
Query: 443 NAYYLTGDH 451
+A+ G+H
Sbjct: 374 DAFRSKGEH 382
>gi|406951596|gb|EKD81486.1| hypothetical protein ACD_39C01785G0001, partial [uncultured
bacterium]
Length = 387
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 111/262 (42%), Gaps = 47/262 (17%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P + A+ LGL+Y + G +EKAE++L R A + + P
Sbjct: 70 PYSEQAYNFLGLIYLQEGL-------FEKAEDMLKRAVA---------------IEPMYP 107
Query: 132 ESSGDNSLDK-ELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
E+ +L K L + +E + L+ ++ D Q W LG+ SG++ SI+
Sbjct: 108 EAL--RNLGKLYLRQDRFDEATTYLRRTLALDVNQPYTWYLLGMAQYFSGKITESITSYE 165
Query: 191 SLLAVDPN-NCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYG 249
+ +++PN + NLG+AY ++ ++ + +++++ ++ H AL N G
Sbjct: 166 NAFSMEPNLPVEAHYNLGVAYHETSRYLEAVRSYEEVLKQEPAHINALNN--------LG 217
Query: 250 SVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 309
V + G ++ A+++ + LK D NL N + T D +
Sbjct: 218 LVYSILG---------EKDRAIDLFNQV----LKIDNGNIKARINLGNVFLSTRDLVEAE 264
Query: 310 KCLEKAAKLEPNCMSTRYAVAV 331
K A L+ + +S R + V
Sbjct: 265 KIYRSAISLDQSDISPRLNLGV 286
>gi|118357165|ref|XP_001011832.1| DNA polymerase family B containing protein [Tetrahymena thermophila]
gi|89293599|gb|EAR91587.1| DNA polymerase family B containing protein [Tetrahymena thermophila
SB210]
Length = 2315
Score = 50.8 bits (120), Expect = 0.002, Method: Composition-based stats.
Identities = 47/175 (26%), Positives = 75/175 (42%), Gaps = 22/175 (12%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+ ++ L K ES+Q + Q ++NT+G I + +I L + P+ + NL
Sbjct: 1839 KFQDALQKFNESLQINPLQVDIYNTIGSIYDQQNMKDQAIKQYQKALEIQPSYYTALLNL 1898
Query: 207 GIAYFQSGDMEQSA-KCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
G YF +M + A +CFQ A IN +L + K ++ +
Sbjct: 1899 GNLYFWDKNMVKEANECFQK---------ALDINPNSLQVLKRAALFYYSNNQF------ 1943
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
Q + N K AL DP+ I+ LA Y+ G+ + + K LEKA K P
Sbjct: 1944 -QEAIQNYEK-----ALSIDPQDYEIFGCLAQVYHQIGNIQKAIKILEKAIKQNP 1992
Score = 46.2 bits (108), Expect = 0.040, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 63/142 (44%), Gaps = 21/142 (14%)
Query: 180 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 239
G ++ +I L ++PN+ D + N+ + +F +G+ E+S CF+ + +H AL N
Sbjct: 2111 GMIEEAIFWCEKALKINPNSVDVLSNIALLHFMNGNTEESKICFEKTLKIKPDHSYALTN 2170
Query: 240 YAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 299
+ L G D + A++ ++ +++ DP H + NL Y
Sbjct: 2171 LGFIYY------LQG-----------DYSKAISFYQQ----SIEIDPSMHHGFNNLGLIY 2209
Query: 300 YLTGDHRSSGKCLEKAAKLEPN 321
G + + EKA ++ PN
Sbjct: 2210 QHQGLAEQAKQQYEKALQILPN 2231
Score = 41.2 bits (95), Expect = 1.1, Method: Composition-based stats.
Identities = 52/255 (20%), Positives = 96/255 (37%), Gaps = 40/255 (15%)
Query: 82 GLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLS-LVQIHHAQCLLPESSGDNSLD 140
L Y Q +A+ +YEKA I D E+ L Q++H
Sbjct: 1934 ALFYYSNNQFQEAIQNYEKALSI------DPQDYEIFGCLAQVYH--------------- 1972
Query: 141 KELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNC 200
+ +++ + L+++++ + R LG + G +I + L ++P
Sbjct: 1973 ---QIGNIQKAIKILEKAIKQNPRNHQFHYDLGNYSSEVGLKNEAIQCYLNALEINPEFY 2029
Query: 201 DCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL--------------C 246
+ NLG Y +E++ CF ++ ALI L + C
Sbjct: 2030 QALNNLGGEYIFMERLEEAQSCFLKILETYPQDFNALIQLVVLCIERGMIEEAKDYLQKC 2089
Query: 247 KYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHR 306
+ L N G C + + A ALK +P + + +N+A +++ G+
Sbjct: 2090 LLNNNLDYDACN-GIAQCYEALGMIEEAIFWCEKALKINPNSVDVLSNIALLHFMNGNTE 2148
Query: 307 SSGKCLEKAAKLEPN 321
S C EK K++P+
Sbjct: 2149 ESKICFEKTLKIKPD 2163
>gi|313680127|ref|YP_004057866.1| tetratricopeptide tpr_1 repeat-containing protein [Oceanithermus
profundus DSM 14977]
gi|313152842|gb|ADR36693.1| Tetratricopeptide TPR_1 repeat-containing protein [Oceanithermus
profundus DSM 14977]
Length = 364
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 101/251 (40%), Gaps = 33/251 (13%)
Query: 70 KMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCL 129
K P N +A + LG ++ Q A+ + ++A + + A P ++L Q + + L
Sbjct: 65 KEPNNVYALYGLGRTQLKMHQFTAAIENLKRA----IAIDGSYA-PLYVALAQAYTDRYL 119
Query: 130 LPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVL 189
E DK + L++ L L ++ D ++N GL+ G L + +
Sbjct: 120 YAE-------DKTAAEKFLDQALLILDDARTIDPNYHAIYNQRGLVYQYKGELDKAEAAF 172
Query: 190 SSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYG 249
LA+ P++ NL Y G ++++ + D PA +A L YG
Sbjct: 173 KQALAIAPDDAVVRYNLAQVYLSQGKLDEALDMLAQGVALD---PA-----SAQLQLLYG 224
Query: 250 SVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 309
VLA G + A++ L A + P A W NL YYL +
Sbjct: 225 KVLAVKG-------------RLVEAEQALAKATELAPLNASTWLNLGQVYYLEKKFAEAI 271
Query: 310 KCLEKAAKLEP 320
L+KA +L+P
Sbjct: 272 DTLDKAIELDP 282
>gi|167041835|gb|ABZ06576.1| putative TPR domain protein [uncultured marine microorganism
HF4000_097M14]
Length = 503
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 79/172 (45%), Gaps = 23/172 (13%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A+AH+ LG+ ++ LG+ KA+ Y+KA +I P + H+ ++
Sbjct: 108 PNYANAHYNLGIAFKELGELKKAIHCYQKAIQI---------NP---NYANAHYNLGIVF 155
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+ G EL++ + ++++Q + N LG++ + G L+ +I
Sbjct: 156 KELG-----------ELKKAIHCYQKAIQINPNHVAAHNNLGIVFKELGELKKAIHCYQK 204
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL 243
+ ++PN+ NLG+ ++ + +++ C++ I N+ A N +L
Sbjct: 205 AIQINPNHVAAHNNLGLVFYGLSECKKAIGCYKKAIQIQSNYSDAYWNLHSL 256
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 66/163 (40%), Gaps = 21/163 (12%)
Query: 159 MQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQ 218
+Q + N LG L + G + +I + ++PN + NLGIA+ + G++++
Sbjct: 70 IQINPNHVTAHNNLGAALKELGEQKKAIDCYQKAIQINPNYANAHYNLGIAFKELGELKK 129
Query: 219 SAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECL 278
+ C+Q I + N+ A A+ G + + A C
Sbjct: 130 AIHCYQKAIQINPNY---------------------ANAHYNLGIVFKELGELKKAIHCY 168
Query: 279 LAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
A++ +P NL + G+ + + C +KA ++ PN
Sbjct: 169 QKAIQINPNHVAAHNNLGIVFKELGELKKAIHCYQKAIQINPN 211
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 69/166 (41%), Gaps = 21/166 (12%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
++++Q + A LG+ + G L+ +I + ++PN + NLGI + + G+
Sbjct: 101 QKAIQINPNYANAHYNLGIAFKELGELKKAIHCYQKAIQINPNYANAHYNLGIVFKELGE 160
Query: 216 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 275
++++ C+Q I + NH A A+ G + + A
Sbjct: 161 LKKAIHCYQKAIQINPNHVA---------------------AHNNLGIVFKELGELKKAI 199
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
C A++ +P NL +Y + + + C +KA +++ N
Sbjct: 200 HCYQKAIQINPNHVAAHNNLGLVFYGLSECKKAIGCYKKAIQIQSN 245
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/166 (18%), Positives = 67/166 (40%), Gaps = 21/166 (12%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
KE+++++ LG + ++ + ++ ++PN+ NLG A + G+
Sbjct: 33 KETLKTNPNHIETIFLLGSLSAQTNNFDKAKKFFKKVIQINPNHVTAHNNLGAALKELGE 92
Query: 216 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 275
+++ C+Q I + N+ A A+ G + + A
Sbjct: 93 QKKAIDCYQKAIQINPNY---------------------ANAHYNLGIAFKELGELKKAI 131
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
C A++ +P A+ NL + G+ + + C +KA ++ PN
Sbjct: 132 HCYQKAIQINPNYANAHYNLGIVFKELGELKKAIHCYQKAIQINPN 177
>gi|146284591|ref|YP_001165544.1| TPR repeat-containing protein [Enterobacter sp. 638]
gi|145320724|gb|ABP62870.1| Tetratricopeptide TPR_2 repeat protein [Enterobacter sp. 638]
Length = 697
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 77/150 (51%), Gaps = 21/150 (14%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
L+E + +++ + + A+ WN LG+IL ++G+ ++S+ L + ++ P+N + NL
Sbjct: 98 LQEAEQAARRAVEQEPQLALAWNNLGIILQEAGKFKASLECLQYVASLQPDNAEVHNNLA 157
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 267
+ + GD++++ + +Q + ++ N A+LL E C+D+
Sbjct: 158 NTWKRLGDLQRAQESYQRALNLRPDYAEVYSNLASLL---------------SELGCIDE 202
Query: 268 ASAVNVAKECLLAALKADPKAAHIWANLAN 297
A+A A++ A+ +P+ A + NLA+
Sbjct: 203 AAA--SARQ----AIDINPQLADAYLNLAD 226
>gi|443474936|ref|ZP_21064901.1| Tetratricopeptide TPR_1 repeat-containing protein [Pseudanabaena
biceps PCC 7429]
gi|443020263|gb|ELS34241.1| Tetratricopeptide TPR_1 repeat-containing protein [Pseudanabaena
biceps PCC 7429]
Length = 303
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 101/258 (39%), Gaps = 24/258 (9%)
Query: 104 ILLRCEADIA----RPELLSLVQIHHAQCLLPESSGDNSLDK---ELEPEELEEILSKLK 156
+++ C A+ A RP+ VQ+ + P + D L++ + LE + +
Sbjct: 13 VIMICGAEGAIAQLRPKPPQKVQVQQEIVVPPNETADQLLERGNAYVRLGNLEGAIVIFR 72
Query: 157 ESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 216
++Q + V LGL ++G+L+ +I +DP NLG A QSGD
Sbjct: 73 AAIQKNPELTVAHYNLGLAYAQAGKLKEAIHSFQRATRLDPKFAIAYSNLGAALLQSGDA 132
Query: 217 EQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKE 276
++ Q I D A N L K + GA AN + L+ + +
Sbjct: 133 NRAIPSLQRAISLDPKLSVAYYNLG--LALKEKKDINGAIANLNQALKLNPQAPETIYNL 190
Query: 277 CLL---------------AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
LL AL+ +P+ A + NL A + G ++ L A + +
Sbjct: 191 GLLIQTQGNITKAIAYYAKALQLNPEYAEAYYNLGAALLIQGQTENAIGQLRNALQFRKD 250
Query: 322 CMSTRYAVAVSRIKDAER 339
Y + V++++ ++
Sbjct: 251 YAEAFYTLGVAQVRAGQK 268
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 15/162 (9%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPEL-LSLVQIHHAQ 127
+K P+ AH+ LGL Y + G+ +A+ S+++A L + IA L +L+Q A
Sbjct: 76 QKNPELTVAHYNLGLAYAQAGKLKEAIHSFQRATR--LDPKFAIAYSNLGAALLQSGDAN 133
Query: 128 CLLPESSGDNSLDKEL------------EPEELEEILSKLKESMQSDTRQAVVWNTLGLI 175
+P SLD +L E +++ ++ L ++++ + + LGL+
Sbjct: 134 RAIPSLQRAISLDPKLSVAYYNLGLALKEKKDINGAIANLNQALKLNPQAPETIYNLGLL 193
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDME 217
+ G + +I+ + L ++P + NLG A G E
Sbjct: 194 IQTQGNITKAIAYYAKALQLNPEYAEAYYNLGAALLIQGQTE 235
>gi|427738410|ref|YP_007057954.1| tetratricopeptide repeat protein,protein kinase family protein
[Rivularia sp. PCC 7116]
gi|427373451|gb|AFY57407.1| tetratricopeptide repeat protein,protein kinase family protein
[Rivularia sp. PCC 7116]
Length = 564
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 21/172 (12%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E ++++ + + + ++N LG I + + +I+ L +DPNN NLG
Sbjct: 354 DEAWGYYQKALYYNPKDSRIYNNLGFICQRQKKYSCAINNFEKSLNLDPNNYITRYNLGE 413
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ- 267
Y +GD++ + K +Q I+ + + P A A +N G LD
Sbjct: 414 LYEDTGDLKNAEKQYQ--IVMESDSPIA----------------TNAASNLGRLLILDMR 455
Query: 268 -ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 318
+ A+ E L +AA ++ NL AYY+ D++ + LE+A +L
Sbjct: 456 ISEAIKRISEGLKKTDNPRVQAA-LYKNLGWAYYIQTDYKQAKVALEEAIRL 506
>gi|148553984|ref|YP_001261566.1| hypothetical protein Swit_1062 [Sphingomonas wittichii RW1]
gi|148499174|gb|ABQ67428.1| Tetratricopeptide TPR_2 repeat protein [Sphingomonas wittichii RW1]
Length = 503
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 85/215 (39%), Gaps = 30/215 (13%)
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
+PE ++++L + D A V G+ +SG L ++ ++ LA DP+N +
Sbjct: 17 DPEAARPLVARLLAAHPGD---ADVLTVAGIAAQRSGGLDEALGHFAAALAADPDNPARL 73
Query: 204 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGA 263
GN +A Q+G + + + + P L N G+
Sbjct: 74 GNHAVALKQAGRFDAAIAALERALALRPGAPVTLANL---------------------GS 112
Query: 264 CLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
CL A A+ L AA+ A P W NL A TG + + +A L P
Sbjct: 113 CLIAADRPKEAEAPLRAAVAAKPDHVEAWNNLGVALARTGRAAEAEQAYARALALRPG-- 170
Query: 324 STRYA-VAVSRIKDAERSQEPTEQLSWAGNEMASI 357
YA A++R+ +R TE AG +AS+
Sbjct: 171 ---YAEAALNRVDALDRLGRGTEAERIAGAVLASL 202
>gi|428319215|ref|YP_007117097.1| glycosyl transferase group 1 [Oscillatoria nigro-viridis PCC 7112]
gi|428242895|gb|AFZ08681.1| glycosyl transferase group 1 [Oscillatoria nigro-viridis PCC 7112]
Length = 3281
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 82/199 (41%), Gaps = 15/199 (7%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+L E + + +++ D A N LG++L G + ++S +A++P + NL
Sbjct: 1924 DLAEAAAYYQRAIEIDPNCAQAHNNLGILLQDRGNIPDAVSCFQKAIALNPIYVKALNNL 1983
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK---------YGSVLAG--- 254
G Q GD+ + CF + + N+ AL+N + + Y +
Sbjct: 1984 GTILQQQGDLPTAIACFHQALSVNSNYVPALVNLGVAMQAQSQLDEAQRLYERAIEAEPN 2043
Query: 255 --AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 312
AG CL A + A L A+ +P NL +A+ GD + C
Sbjct: 2044 DPAGHYHLGTLCLG-AGKIEQAISSLERAISLNPNYIEAITNLGSAFEQAGDINRAIVCY 2102
Query: 313 EKAAKLEPNCMSTRYAVAV 331
KA +++ +C+ + +++
Sbjct: 2103 NKALEIDADCVKAHFNLSL 2121
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%)
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
LG + L +G+++ +IS L ++++PN + I NLG A+ Q+GD+ ++ C+ + D
Sbjct: 2051 LGTLCLGAGKIEQAISSLERAISLNPNYIEAITNLGSAFEQAGDINRAIVCYNKALEIDA 2110
Query: 232 NHPAALINYAALLL 245
+ A N + +LL
Sbjct: 2111 DCVKAHFNLSLVLL 2124
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 77/181 (42%), Gaps = 28/181 (15%)
Query: 162 DTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 221
D A + LG++ +SG+L +I+ LA+D N + NLG A ++G+ E++
Sbjct: 1235 DPNYAAAHSNLGVVKQQSGQLTEAIAHYRQALAIDRNLAETASNLGSALAEAGETEEAIA 1294
Query: 222 CFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAA 281
++ + + N P ALIN G ++ V A C A
Sbjct: 1295 EYERALSLNPNCPEALINL---------------------GLLREEQGDVAEAISCYEQA 1333
Query: 282 LKADPKAAHIWANLANAYYLTGDHRSSG-------KCLEKAAKLEPNCMSTRYAVAVSRI 334
++ +P A + NL A G+ ++G E+A +EPN + + +A + I
Sbjct: 1334 IQVNPNCAAAYLNLGIALEEQGEEAAAGANYERAIANYERAIAIEPNYLDALHNLAYASI 1393
Query: 335 K 335
+
Sbjct: 1394 R 1394
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 81/183 (44%), Gaps = 14/183 (7%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+L E ++ ++++ D A + LG L ++G + +I+ L+++PN + + NL
Sbjct: 1254 QLTEAIAHYRQALAIDRNLAETASNLGSALAEAGETEEAIAEYERALSLNPNCPEALINL 1313
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G+ + GD+ ++ C++ I + N AA +N G L G GA +
Sbjct: 1314 GLLREEQGDVAEAISCYEQAIQVNPNCAAAYLN--------LGIALEEQGEEAAAGANYE 1365
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
+A A N + A+ +P NLA A G + ++A L+P+ T
Sbjct: 1366 RAIA-NYER-----AIAIEPNYLDALHNLAYASIRQGRVADAIAYYDRALALQPDLAETD 1419
Query: 327 YAV 329
A+
Sbjct: 1420 LAL 1422
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 45/82 (54%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
++L+E L+ ++++Q A LG++L K G+++ +I L++ P+ + N
Sbjct: 1430 DKLDEALAFCQQAIQKLPASAQAHCNLGIVLQKQGKIEDAIGCYQQALSLKPDFPQALNN 1489
Query: 206 LGIAYFQSGDMEQSAKCFQDLI 227
LG A+ ++G M ++ C+ I
Sbjct: 1490 LGQAFEEAGKMAEAIDCYHRAI 1511
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 67/175 (38%), Gaps = 21/175 (12%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
E++ + + ++Q D+ + LG + + +L +I+ L V+PN + L
Sbjct: 133 EIDAAILYYQTALQLDSNLHETAHNLGHLYKQKNQLNEAIAYYLHALKVNPNLTYSLMGL 192
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G Q G ++ C+Q + D N+P A N GA
Sbjct: 193 GTVLQQQGKFAEAFNCYQQAVKLDPNNPEAHNNV---------------------GAFFH 231
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
+ VA ALK P NL +A G+ + + C +A +L+P+
Sbjct: 232 EQGNAKVAISHYRQALKLKPDFVEAINNLGHALVDLGEFQEAFSCHIRALELQPD 286
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 98/283 (34%), Gaps = 41/283 (14%)
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
G +L GR +I+ + L PN+ + NL + Q+GD+ ++A +Q I D N
Sbjct: 1882 GNVLKAQGRFSEAIACFKNALVWQPNSIEAATNLAVTLHQTGDLAEAAAYYQRAIEIDPN 1941
Query: 233 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 292
C A A+ G L + A C A+ +P
Sbjct: 1942 -------------C--------AQAHNNLGILLQDRGNIPDAVSCFQKAIALNPIYVKAL 1980
Query: 293 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV-----SRIKDAERSQEPTEQL 347
NL GD ++ C +A + N + + V S++ +A+R E +
Sbjct: 1981 NNLGTILQQQGDLPTAIACFHQALSVNSNYVPALVNLGVAMQAQSQLDEAQRLYE--RAI 2038
Query: 348 SWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGE 407
N+ A G G +++ + A N + + A E
Sbjct: 2039 EAEPNDPAGHYHLGTLC--------LGAGKIEQAISSLERAISLNPNYIEAITNLGSAFE 2090
Query: 408 SAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGD 450
QA +N A C AL+ D NL+ LTGD
Sbjct: 2091 -----QAGDINRAIVCYNKALEIDADCVKAHFNLSLVLLLTGD 2128
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 16/117 (13%)
Query: 164 RQAVVW--------NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
+ A+VW L + L ++G L + + + +DPN NLGI G+
Sbjct: 1899 KNALVWQPNSIEAATNLAVTLHQTGDLAEAAAYYQRAIEIDPNCAQAHNNLGILLQDRGN 1958
Query: 216 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVN 272
+ + CFQ I + + AL N G++L G AC QA +VN
Sbjct: 1959 IPDAVSCFQKAIALNPIYVKALNN--------LGTILQQQGDLPTAIACFHQALSVN 2007
>gi|291234181|ref|XP_002737022.1| PREDICTED: P58IPK-like [Saccoglossus kowalevskii]
Length = 1148
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%)
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
++S++ D++Q+ + + GL L G+++ SI V ++ L ++P DC +LG AY + G
Sbjct: 561 FQKSLELDSKQSEIMHFRGLALYHQGKIKDSIEVFNTTLKLEPLCVDCRRSLGHAYRELG 620
Query: 215 DMEQSAKCFQDLILKDQNHPAALINYAALL 244
D E S + F + ++H +L +LL
Sbjct: 621 DFETSMQHFNTALSLQEDHVQSLQLRGSLL 650
>gi|359789328|ref|ZP_09292277.1| TPR repeat-containing protein [Mesorhizobium alhagi CCNWXJ12-2]
gi|359254819|gb|EHK57790.1| TPR repeat-containing protein [Mesorhizobium alhagi CCNWXJ12-2]
Length = 281
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 102/268 (38%), Gaps = 48/268 (17%)
Query: 54 EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIA 113
+E +SSL V + P + A+ + G Y R G+ +A+ ++KA ++
Sbjct: 48 DENISSLTA----VIERNPSDPEAYNVRGSAYGRGGKYQEALRDFDKALQL--------- 94
Query: 114 RPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLG 173
RP + Q + + L+ GD + L+ S+Q + + G
Sbjct: 95 RP---NFYQAYANRALIHRFLGDQA-----------SALADYNRSIQLNPSYDAAYIGRG 140
Query: 174 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNH 233
+ K+GR+Q + S + +D + N G+ Y G Q A +D
Sbjct: 141 NLYRKAGRVQEAFSDFQRAIQLDTTDPRAYHNRGLIYQSQG---QHAFAIEDFSTAISLA 197
Query: 234 PAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWA 293
P A Y G L+ N E A D A+K D K A WA
Sbjct: 198 PDAAEPYN-------GRGLSYIATNDEENAFAD-----------FNMAIKLDGKIAESWA 239
Query: 294 NLANAYYLTGDHRSSGKCLEKAAKLEPN 321
N A Y GD + + K +AA+L+PN
Sbjct: 240 NQALIYERRGDKQRAAKSYARAAQLDPN 267
>gi|340505437|gb|EGR31764.1| hypothetical protein IMG5_102640 [Ichthyophthirius multifiliis]
Length = 1411
Score = 50.8 bits (120), Expect = 0.002, Method: Composition-based stats.
Identities = 47/197 (23%), Positives = 82/197 (41%), Gaps = 24/197 (12%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
+E +E ++ +LK++++ + R + + +GLI ++ Q + L DP + +C
Sbjct: 1139 IEKKEYKKASEELKQTLKINPRFSGAFKAMGLIFYRNANEQIACKYYQKALECDPTDMEC 1198
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY--GSVLAGAGA--- 257
L Y+ + + + + ++++ DQN I Y L C Y G +
Sbjct: 1199 KVGLANCYYLLENFDLAIQYYEEISNIDQNEE---IEY-NLGNCYYMKGEIDEAISHYKN 1254
Query: 258 -------------NTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGD 304
N G C+ Q A EC + +P + NLAN YY+ G+
Sbjct: 1255 SIDIKPDKTDCLYNLGNAFCIVQ--NFEKALECFQKTVDIEPHNSSAIYNLANTYYILGE 1312
Query: 305 HRSSGKCLEKAAKLEPN 321
H + EKA LEPN
Sbjct: 1313 HELAFIQFEKALDLEPN 1329
Score = 39.3 bits (90), Expect = 4.9, Method: Composition-based stats.
Identities = 69/300 (23%), Positives = 120/300 (40%), Gaps = 45/300 (15%)
Query: 157 ESMQSDTRQAVVWNTLG---LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQS 213
+S+Q D + V LG L+L + +I L+ L++D N+ DC+ LG AY +
Sbjct: 945 QSLQPDNFEITV--KLGKAYLLLNNEDGIDDAIFHLTKALSIDENDYDCLIGLGKAYEKK 1002
Query: 214 GDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNV 273
GD+++S + Q I + P +L N ++L G + +
Sbjct: 1003 GDIDKSIQFTQVAI----SLPNSLPNINSILFL---------------GMLYLKKKDIYN 1043
Query: 274 AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSR 333
A E L+ DPK + A + L G + + + ++A L+ + V
Sbjct: 1044 ASEQFKKILQIDPKNVNALIEYATSLSLQGQYDKAVQYFKEAVSLDQENI-------VGN 1096
Query: 334 IKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWA----GFAAVQKTHHEVAAAF 389
++ + Q L A I +Q++P + A G A ++K ++ A+
Sbjct: 1097 LRLGKIFQNKLNDLDGAIECYKKI------IQVQPEFSKAHYQLGLAYIEKKEYKKAS-- 1148
Query: 390 ETEENELSKMEECAGAGESAFLDQASAVN--VAKECLLAALKADPKAAHIWANLANAYYL 447
E + L +GA ++ L N +A + AL+ DP LAN YYL
Sbjct: 1149 EELKQTLKINPRFSGAFKAMGLIFYRNANEQIACKYYQKALECDPTDMECKVGLANCYYL 1208
>gi|157879372|pdb|1NA3|A Chain A, Design Of Stable Alpha-Helical Arrays From An Idealized
Tpr Motif
gi|157879373|pdb|1NA3|B Chain B, Design Of Stable Alpha-Helical Arrays From An Idealized
Tpr Motif
Length = 91
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
A W LG K G +I L +DPNN + NLG AY++ GD +++ + +Q
Sbjct: 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQK 68
Query: 226 LILKDQNHPAALIN 239
+ D N+ A N
Sbjct: 69 ALELDPNNAEAKQN 82
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 335
E AL+ DP A W NL NAYY GD+ + + +KA +L+PN + + ++ K
Sbjct: 30 EYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 89
>gi|338533149|ref|YP_004666483.1| hypothetical protein LILAB_17515 [Myxococcus fulvus HW-1]
gi|337259245|gb|AEI65405.1| TPR repeat-containing protein [Myxococcus fulvus HW-1]
Length = 1620
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+LEE +++L+++ D R + TLG +LL+ G L + S L L+ +P+N + + L
Sbjct: 1349 QLEEAVAELEKAKTEDPRSTTIPITLGAVLLERGDLPGAESNLGLALSNEPSNHEALYYL 1408
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL---------LCKYGSVL----A 253
+ + + Q+ + + + N P Y +L + + + +
Sbjct: 1409 ALVKAKRLEFTQALDNMRKAVERAPNRPDYHYAYGVILRDAKNLPDAMDSWRKTVELDAS 1468
Query: 254 GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
A A+ G ++S + A A+LKADP+ + ++ +AY+ + K +
Sbjct: 1469 HADAHEALGHAQLESSQFDEAIASFEASLKADPRRTRVMGSIGDAYFAAARWNDAIKRYQ 1528
Query: 314 KAAKLEPNCMSTRYAVAVSRIKDAERSQ 341
A K +P Y VA + + A+ ++
Sbjct: 1529 SALKADPKLTYVYYKVARAFTEQAQHAK 1556
>gi|427708392|ref|YP_007050769.1| hypothetical protein Nos7107_3027 [Nostoc sp. PCC 7107]
gi|427360897|gb|AFY43619.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
7107]
Length = 308
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 21/179 (11%)
Query: 160 QSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 219
QS + AV W GL +++GR+Q +I+ + +DP NLG+AY Q+G ++ +
Sbjct: 41 QSVNQAAVDWLNQGLQSIQAGRIQDAIASFQKAIQLDPKLAAGYYNLGLAYRQTGQLKPA 100
Query: 220 AKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLL 279
A F D S A A AN G GA L+ + + A + L
Sbjct: 101 ADAFYQATQAD-------------------SQFAPAFANLG-GALLE-GNNIQQANDYLQ 139
Query: 280 AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAE 338
A++ DPK NL D + +KAA+ N Y + + ++ +
Sbjct: 140 RAIELDPKLGFAHYNLGLVQQQQQDWERAIASFKKAAEYSQNAPEPHYHLGICYLQQGK 198
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 78/204 (38%), Gaps = 22/204 (10%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+L+ ++ Q+D++ A + LG LL+ +Q + L + +DP NL
Sbjct: 96 QLKPAADAFYQATQADSQFAPAFANLGGALLEGNNIQQANDYLQRAIELDPKLGFAHYNL 155
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G+ Q D E++ F+ QN P + G C
Sbjct: 156 GLVQQQQQDWERAIASFKKAAEYSQNAPE---------------------PHYHLGICYL 194
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
Q ++ AK A+K +PK NL +++ + + K+A+ N +
Sbjct: 195 QQGKLDKAKNAFRQAIKINPKYTEAHYNLGTIWFVQNKLKEALAAFRKSAEANSNYPNAY 254
Query: 327 YAVAVSRIKDAERSQEPTEQLSWA 350
Y + ++ ++ E T+ L +A
Sbjct: 255 YGAGLVFMQQ-KKYAEATQVLQYA 277
>gi|220927089|ref|YP_002502391.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
gi|219951696|gb|ACL62088.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
Length = 988
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/389 (19%), Positives = 138/389 (35%), Gaps = 60/389 (15%)
Query: 66 HVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHH 125
V R PKN A+ G YQ G+ +A++ Y++A +Q++
Sbjct: 85 QVLRLNPKNVIAYNNRGFAYQSKGEYDRAIADYDQA-------------------LQLNP 125
Query: 126 AQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSS 185
+ + GD K E + ++ ++++ + + +N GL+ G +
Sbjct: 126 KYAIAYRNRGDVFRSKG----EHDRAIADYSQALRFNPKYIFAYNNRGLVFQSKGEYDRA 181
Query: 186 ISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL 245
I+ L +DP N G+A+ + +++ F + D + A N
Sbjct: 182 IADFDQALRLDPKYVVAYNNRGLAFQSKREYDRAIADFDQALRLDSKYKFAYNN------ 235
Query: 246 CKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDH 305
G G + A DQ AL+ DPK + N +A+ G++
Sbjct: 236 --RGLTFQSKGEHDRAIADFDQ-------------ALRLDPKYTFAYRNRGDAFRSKGEY 280
Query: 306 RSSGKCLEKAAKLEPNCM--STRYAVAVSRIKDAERSQEPTEQ-LSWAGNEMASILREGD 362
+ ++A L+P T A A +D +R+ +Q L +A+ GD
Sbjct: 281 DRAIADYDQALLLDPKYTFAYTARAFAFQSKRDYDRALADYDQALRLDPKSVAAYRNRGD 340
Query: 363 PVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKE 422
+ K ++ A A E L + A + N+A
Sbjct: 341 FFR-------------SKGDYDRAIADYDEALRLDPKNKLAYNNRGLVFQSKNEYNLAIA 387
Query: 423 CLLAALKADPKAAHIWANLANAYYLTGDH 451
AL DPK A I+ N + + G++
Sbjct: 388 DFDQALLIDPKDAVIYRNRGDVFRSKGEY 416
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 109/280 (38%), Gaps = 24/280 (8%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKA------EEILLRCEADIARPE---LLSLVQ 122
PKN A+ GL++Q + A++ +++A + ++ R D+ R + ++
Sbjct: 363 PKNKLAYNNRGLVFQSKNEYNLAIADFDQALLIDPKDAVIYRNRGDVFRSKGEYDRAIAN 422
Query: 123 IHHAQCLLPESSG--DNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSG 180
A L P+ + +N E + L+ +S+Q D +QAVV+ G + G
Sbjct: 423 YDQALQLDPKYAAVHNNRGLAFYRKGEYDRALADYDQSLQLDPKQAVVYTNRGDVFRIKG 482
Query: 181 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 240
+I+ L +DP N G+ + G+ ++ + + D + A N
Sbjct: 483 EHDRAIADYDQALRLDPKYIFAYNNRGLVFQNKGEYNRAILDYDQTLRLDPKYAIAYANR 542
Query: 241 AALLLCK--YGSVLAGAG-----------ANTGEGACLDQASAVNVAKECLLAALKADPK 287
K Y +A A G G + + A AL+ DPK
Sbjct: 543 GDTFQSKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRKGEHDRAIADYEEALRLDPK 602
Query: 288 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 327
+A + N A G++ + L++A +L+P + Y
Sbjct: 603 SAAAFNNRGAALNKKGEYDRAIADLDQALRLKPGFTNPHY 642
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 60/312 (19%), Positives = 120/312 (38%), Gaps = 49/312 (15%)
Query: 28 KMDSALEFGVDADGDQSGLGTSSSSREEK-VSSLKTGLVHVARKMPKNAHAHFLLGLMYQ 86
++DS +F + GL S ++ ++ L R PK A+ G ++
Sbjct: 224 RLDSKYKFAYN----NRGLTFQSKGEHDRAIADFDQAL----RLDPKYTFAYRNRGDAFR 275
Query: 87 RLGQPLKAVSSYEKAEEILLRCEADIA-----------RPELLSLVQIHHAQCLLPES-- 133
G+ +A++ Y++A +LL + A R +L A L P+S
Sbjct: 276 SKGEYDRAIADYDQA--LLLDPKYTFAYTARAFAFQSKRDYDRALADYDQALRLDPKSVA 333
Query: 134 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLL 193
+ N D + + ++ E+++ D + + +N GL+ +I+ L
Sbjct: 334 AYRNRGDFFRSKGDYDRAIADYDEALRLDPKNKLAYNNRGLVFQSKNEYNLAIADFDQAL 393
Query: 194 AVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY--AALLLCKYGSV 251
+DP + N G + G+ ++ A+ NY A L KY +V
Sbjct: 394 LIDPKDAVIYRNRGDVFRSKGEYDR-----------------AIANYDQALQLDPKYAAV 436
Query: 252 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 311
+ G + + A +L+ DPK A ++ N + + + G+H +
Sbjct: 437 ------HNNRGLAFYRKGEYDRALADYDQSLQLDPKQAVVYTNRGDVFRIKGEHDRAIAD 490
Query: 312 LEKAAKLEPNCM 323
++A +L+P +
Sbjct: 491 YDQALRLDPKYI 502
>gi|289191717|ref|YP_003457658.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
gi|288938167|gb|ADC68922.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
Length = 308
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 23/174 (13%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
PK A+FL G + LG+ E+A+EI L+ + + +L + +A +
Sbjct: 70 PKYILANFLKGALLVSLGR-------LEEAKEIFLKL-YRLKKSDL----SVKYAIAFIL 117
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+ G E + L L E ++ + A+ W G IL K G+L+ S+ +
Sbjct: 118 KKLG-----------EYDSALKILDEVLKKYPQSAIAWAEKGEILYKEGKLKKSLECFDN 166
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL 245
L ++PN+C + G F+ G ++ KCF+ + ++ AL+ +L+
Sbjct: 167 ALKINPNDCQSLQYKGEILFKLGRYGEALKCFKKVFERNDKDIRALMYIIQILI 220
>gi|428214019|ref|YP_007087163.1| glycosyl transferase group 1,tetratricopeptide repeat
protein,tetratricopeptide repeat protein [Oscillatoria
acuminata PCC 6304]
gi|428002400|gb|AFY83243.1| glycosyl transferase group 1,tetratricopeptide repeat
protein,tetratricopeptide repeat protein [Oscillatoria
acuminata PCC 6304]
Length = 2510
Score = 50.4 bits (119), Expect = 0.002, Method: Composition-based stats.
Identities = 47/185 (25%), Positives = 87/185 (47%), Gaps = 11/185 (5%)
Query: 51 SSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKA-----EEIL 105
S +E +++ + V ++P + A LG++ + G +AV+ Y +A +E+
Sbjct: 605 SHQEGNLTAAERLYRQVLAEIPNHPVALTNLGMLLKAEGNCQEAVTCYHRALPYAPQEVG 664
Query: 106 LRCEADIARPEL----LSLVQIHHAQCLLPES-SGDNSLDKEL-EPEELEEILSKLKESM 159
L A EL ++ Q H L P G N+L L E ELE + ++++
Sbjct: 665 LHYNLGNALWELGNRFAAIAQFHRVIVLQPNHVEGYNNLGMVLHELGELEPAIPHFEQAI 724
Query: 160 QSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 219
+ A +N LGL+L GR++ +I+ ++ L + PN + N GIA G++ Q
Sbjct: 725 TLNPNYAQGYNNLGLVLQDLGRVEEAIACYNTALRLQPNYAEAHNNRGIALLIQGNLRQG 784
Query: 220 AKCFQ 224
+ ++
Sbjct: 785 FRDYE 789
Score = 41.2 bits (95), Expect = 1.2, Method: Composition-based stats.
Identities = 41/188 (21%), Positives = 75/188 (39%), Gaps = 24/188 (12%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
K+++ +D R + LG L GR +IS L+ +AVD + NLG A G+
Sbjct: 1136 KQAIVADCRYLPAYINLGATLRSLGRTSEAISYLAQAIAVDSHCLAAHYNLGNALSDEGN 1195
Query: 216 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 275
+++ ++ +I D +H A + G+ L G T A + +A+A+
Sbjct: 1196 FQEATAHYRQVIALDAHHSQAHYH--------LGNALKELGNVTEAIAQIQEATAL---- 1243
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 335
DP L N + G + C ++A L+ + + + ++
Sbjct: 1244 ---------DPNYTEAHNTLGNLFLKAGRITEAMACFQRATALDSQYIDAQINLGIAL-- 1292
Query: 336 DAERSQEP 343
E+ Q P
Sbjct: 1293 -QEQHQTP 1299
Score = 41.2 bits (95), Expect = 1.2, Method: Composition-based stats.
Identities = 57/254 (22%), Positives = 92/254 (36%), Gaps = 42/254 (16%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIAR----PELLSLVQIH 124
R+ P A LLG + + G+ AV Y++A I+ C A L SL +
Sbjct: 1106 RQSPNQAQGWQLLGAIAHQGGKLNTAVGYYKQA--IVADCRYLPAYINLGATLRSLGRTS 1163
Query: 125 HA------------QCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 172
A CL + N+L E +E + ++ + D + L
Sbjct: 1164 EAISYLAQAIAVDSHCLAAHYNLGNALSDE---GNFQEATAHYRQVIALDAHHSQAHYHL 1220
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
G L + G + +I+ + A+DPN + LG + ++G + ++ CFQ D
Sbjct: 1221 GNALKELGNVTEAIAQIQEATALDPNYTEAHNTLGNLFLKAGRITEAMACFQRATALDSQ 1280
Query: 233 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 292
+ A IN G L + A AL+ P +A
Sbjct: 1281 YIDAQINL---------------------GIALQEQHQTPAAIGTYHRALQIQPDSAEAH 1319
Query: 293 ANLANAYYLTGDHR 306
NLA + + GD R
Sbjct: 1320 LNLALSLLIAGDLR 1333
>gi|406955606|gb|EKD84014.1| hypothetical protein ACD_39C00303G0002, partial [uncultured
bacterium]
Length = 675
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 105/270 (38%), Gaps = 40/270 (14%)
Query: 78 HFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPE------LLSLVQIHHAQCLLP 131
H LG+ Y +L + +A+ ++KA EI ++D +L + A
Sbjct: 316 HHKLGIAYSKLNKTQEAIFQWQKAIEI----DSDHFEAHHNLGIAYYNLQRFDEALNEWE 371
Query: 132 ESSGDNSLDKEL---------EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRL 182
++ N D +L + +L+ +S K +++ D LG + G +
Sbjct: 372 KAKAQNPTDPDLYFKLGHAYRQKRKLDSAISSWKRTIELDPNNPNTHFVLGNAYDEKGLI 431
Query: 183 QSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAA 242
+I + + PN+ D NLGIAYFQ +Q+ ++D I
Sbjct: 432 DDAILAWRKVCELAPNDVDAHNNLGIAYFQKNMFDQAISEWEDAI--------------- 476
Query: 243 LLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLT 302
+ + G + G + D+A EC ALK P+ A I +NLA AY+
Sbjct: 477 RITPENGELYNKLGIAYIKLELFDKAV------ECWEKALKYKPEDADILSNLATAYHNR 530
Query: 303 GDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 332
+ + + ++ K P R + ++
Sbjct: 531 EMYDKAIEIWKRVIKYNPQDSEARNKLGIA 560
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 78 HFLLGLMYQRLGQPLKAVSSYEKA-------EEILLRCEADIARPEL--LSLVQIHHAQC 128
HF LG+ Y LG+ +A+S +EKA +I R L S++ +
Sbjct: 78 HFKLGIAYYNLGKEDQAISLWEKAANLNPDDSDIFFRLGVAYYNKGLDDKSVIAFSKSIE 137
Query: 129 LLPESS-GDNSLDKELEPEEL-EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSI 186
L P++S N+L E+ ++ + + K+++ RQ ++N LG K + + +I
Sbjct: 138 LNPKNSEAHNNLAIVFYRLEMYQQAIDEWKKALALSPRQPEIFNNLGNAYSKLNQHREAI 197
Query: 187 SVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 239
+L + P N + LG AY + D+E++ K ++ I + N A N
Sbjct: 198 ETWQKILDLTPENSEVYFKLGSAYGKLDDLEKAIKSWEKCISLNPNDIEAHFN 250
>gi|13472041|ref|NP_103608.1| hypothetical protein mll2208 [Mesorhizobium loti MAFF303099]
gi|14022786|dbj|BAB49394.1| mll2208 [Mesorhizobium loti MAFF303099]
Length = 551
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 105/263 (39%), Gaps = 36/263 (13%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P +A A+ GL + R G +A++ Y +A +SL +
Sbjct: 160 PGDARAYHNRGLNWARKGDKERAIADYSQA----------------ISLDPKN------- 196
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
SS +N D + + ++ + + DT+ A + GLI + G +I+ S
Sbjct: 197 ASSYNNRGDAWDSKGDDDRAMADYNQVIILDTKNAHAYYRRGLIWSRKGDDSRAIADYSQ 256
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK---- 247
++++DP + N G+A+ + GD +++ F + I D AA + L K
Sbjct: 257 VISLDPTDPSIRYNKGLAWLRKGDGDRAIADFDEAIRLDPKMAAAYYDRGTEWLRKGDRD 316
Query: 248 -----YGSVL----AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANA 298
Y V+ A A G L++ A L A+ DPK A I++N A A
Sbjct: 317 RAITDYSEVITLEPTNAMALNDRGFVLNELGEYERALADLNRAIGLDPKQAKIYSNRAIA 376
Query: 299 YYLTGDHRSSGKCLEKAAKLEPN 321
GD + +A L+PN
Sbjct: 377 RAAKGDFAPALADYNQAIALDPN 399
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 85/219 (38%), Gaps = 36/219 (16%)
Query: 73 KNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPE 132
KNAHA++ GL++ R G +A++ Y + + D P ++ + L +
Sbjct: 229 KNAHAYYRRGLIWSRKGDDSRAIADYSQVISL------DPTDPS----IRYNKGLAWLRK 278
Query: 133 SSGDNSLDK-----ELEPE----------------ELEEILSKLKESMQSDTRQAVVWNT 171
GD ++ L+P+ + + ++ E + + A+ N
Sbjct: 279 GDGDRAIADFDEAIRLDPKMAAAYYDRGTEWLRKGDRDRAITDYSEVITLEPTNAMALND 338
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
G +L + G + +++ L+ + +DP N IA GD + + I D
Sbjct: 339 RGFVLNELGEYERALADLNRAIGLDPKQAKIYSNRAIARAAKGDFAPALADYNQAIALDP 398
Query: 232 NHPAA-----LINYAALLLCKYGSVLAGAGANTGEGACL 265
N P A +N+ + +L K A A A + A L
Sbjct: 399 NFPNAYAGRGFVNFYSGMLAKAEPDFAKAAALAPDNAYL 437
>gi|409196336|ref|ZP_11224999.1| tetratricopeptide repeat protein [Marinilabilia salmonicolor JCM
21150]
Length = 713
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 21/152 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
+N G++ K ++SI L VDP N + + NLGIAY Q+ D E++ + + +++
Sbjct: 96 YNLRGIVHQKLENPKASIDDYKQGLDVDPLNMNLMINLGIAYIQTKDFEKATQVYSEILD 155
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ N A +N LA AN GA D + AV + +P
Sbjct: 156 ESPNMVTAYLNRG----------LARFSANDTVGALQDFSQAV-----------ERNPYI 194
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
+ N + YY G+ + K ++ A L P
Sbjct: 195 PDGFVNRSMVYYHQGEFEKALKDVDAAVLLRP 226
>gi|113476446|ref|YP_722507.1| sulfotransferase [Trichodesmium erythraeum IMS101]
gi|110167494|gb|ABG52034.1| sulfotransferase [Trichodesmium erythraeum IMS101]
Length = 681
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 117/285 (41%), Gaps = 36/285 (12%)
Query: 71 MPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEE------ILLRCEADI---ARPELLSLV 121
P A AH +G MY + KA Y+KA I+ R A + E L+
Sbjct: 75 FPDFAEAHANIGSMYAKQRDWEKAFFYYQKAIHIKPNLAIVYRNLAKVCECTEKEELATE 134
Query: 122 QIHHAQCLLPESSGD----NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILL 177
+ A L PES+ N K LE ++E + + +++ + + + LG +L+
Sbjct: 135 YTYKALILEPESATAIEHLNIGKKLLELNKIEAAIKCYRNAVKINPNLSAGYQNLGELLV 194
Query: 178 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-LKDQNHPAA 236
K+G L+S++ L + +D N C LG + + G + + + I LK +NH
Sbjct: 195 KNGELESALIALREGIKIDAKNPRCYYLLGEVWQKQGQYKLAISDYSRAIELKPENH--- 251
Query: 237 LINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 296
L K G V G ++VA C A++ +P + +L
Sbjct: 252 ------LFHKKLGDVWEKMG-------------KLDVAISCYEKAIEINPNFFWSYHSLG 292
Query: 297 NAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ 341
N Y + +KA + PN +T Y +A + + ++++ +
Sbjct: 293 NVYTKQQKWDKAIAAYDKATIINPNFSNTYYNLADAFLHNSQKEE 337
>gi|118378373|ref|XP_001022362.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89304129|gb|EAS02117.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 390
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 107/255 (41%), Gaps = 32/255 (12%)
Query: 77 AHFLLGLMYQRLGQPLKAVSSYEKA-------EEILLRCEADIARPELLSLVQIHHAQCL 129
++ LGL+YQ+ GQ +++ Y+K E L + A + + + +C+
Sbjct: 49 VYYNLGLVYQQKGQLDESIKWYKKCLNLNPNDESCLQKIGAVYFQKNMFDECIEKNLRCI 108
Query: 130 LPESSGDNSLDK----ELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSS 185
N + +E +E L+ K+S++ + Q + +G+I + G L+ +
Sbjct: 109 QINPKNINYYNNLGFIFIEKNMNDEALNYFKKSLEINPNQDQINYNIGVIYDRKGLLEEA 168
Query: 186 ISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL 245
I + + ++P C NLG+ + +++ + +Q I+ + H + N LL
Sbjct: 169 IKHYQNCINLNPEYSKCYYNLGVCFRNKNMFDEAIQNYQKCIILNPQHESCYYNLGNALL 228
Query: 246 CKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDH 305
E LD+ A++ ++C L +PK + N+ NA+ +
Sbjct: 229 ---------------EKNMLDE--AISAFQKC----LNINPKKDSCYENMGNAFLRKEMY 267
Query: 306 RSSGKCLEKAAKLEP 320
+ K +K+ +L P
Sbjct: 268 NEAIKSYQKSIELNP 282
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 154 KLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQS 213
KL +++D V+ LGL+ + G+L SI L ++PN+ C+ +G YFQ
Sbjct: 37 KLYAQLEADDND--VYYNLGLVYQQKGQLDESIKWYKKCLNLNPNDESCLQKIGAVYFQK 94
Query: 214 GD----MEQSAKCFQ 224
+E++ +C Q
Sbjct: 95 NMFDECIEKNLRCIQ 109
>gi|301058162|ref|ZP_07199214.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
gi|300447794|gb|EFK11507.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
Length = 482
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 76/190 (40%), Gaps = 21/190 (11%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+L+E L + ++++Q AV + +GLI + G + ++ + + P N N
Sbjct: 273 KLDEALLQYEKALQLRPNFAVAHDNMGLIFMAKGNIPEAVKHTGMAVRIRPGNAIIQNNY 332
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G + G +E++AK F A + +Y A A G L
Sbjct: 333 GQLLLRQGRIEEAAKHFYQ---------------AVRIKPRY------AKAQNNLGIALA 371
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
Q + AKE LL A + DP I N+ + L G+ + + + E + PN
Sbjct: 372 QQKKLKEAKEHLLLAARLDPNNPEILNNVGQVFMLQGNSKEAVRYFEATIQQNPNFAQAL 431
Query: 327 YAVAVSRIKD 336
+ R+K+
Sbjct: 432 TNLGFMRLKE 441
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 84/189 (44%), Gaps = 21/189 (11%)
Query: 67 VARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHA 126
V K P N A++ LG + QR G+ +A+ YEKA + LR +A ++ I A
Sbjct: 250 VTSKSPHNHRAYYNLGNVLQRRGKLDEALLQYEKALQ--LRPNFAVAHD---NMGLIFMA 304
Query: 127 QCLLPESSGDNSLDKELEPE----------------ELEEILSKLKESMQSDTRQAVVWN 170
+ +PE+ + + P +EE ++++ R A N
Sbjct: 305 KGNIPEAVKHTGMAVRIRPGNAIIQNNYGQLLLRQGRIEEAAKHFYQAVRIKPRYAKAQN 364
Query: 171 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 230
LG+ L + +L+ + L +DPNN + + N+G + G+ +++ + F+ I ++
Sbjct: 365 NLGIALAQQKKLKEAKEHLLLAARLDPNNPEILNNVGQVFMLQGNSKEAVRYFEATIQQN 424
Query: 231 QNHPAALIN 239
N AL N
Sbjct: 425 PNFAQALTN 433
>gi|449125251|ref|ZP_21761553.1| hypothetical protein HMPREF9723_01597 [Treponema denticola OTK]
gi|448939220|gb|EMB20137.1| hypothetical protein HMPREF9723_01597 [Treponema denticola OTK]
Length = 372
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 65/163 (39%), Gaps = 21/163 (12%)
Query: 168 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
+ N +G+I + SI +L A+D N + NLG Y Q+GD + + +CF D++
Sbjct: 79 ILNNMGVIYRRLNMFNESIVILEKAKAIDSKNETTLYNLGNTYKQNGDYKHAIQCFTDVL 138
Query: 228 LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPK 287
P + Y L GSV C D A+ K LK DP
Sbjct: 139 ---DIKPDDALAYNHL-----GSVYF---------LCKDYPKALETYK----IGLKVDPN 177
Query: 288 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
+ NLA Y ++ + + A K +PN A+A
Sbjct: 178 HPFLNFNLAELYKEEKHYKEAINSYQTAMKTKPNWYEALAAIA 220
>gi|411117171|ref|ZP_11389658.1| ChAPs family protein (Chs5p-Arf1p-binding),tetratricopeptide repeat
protein [Oscillatoriales cyanobacterium JSC-12]
gi|410713274|gb|EKQ70775.1| ChAPs family protein (Chs5p-Arf1p-binding),tetratricopeptide repeat
protein [Oscillatoriales cyanobacterium JSC-12]
Length = 295
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 100/252 (39%), Gaps = 41/252 (16%)
Query: 104 ILLRCEADIARPELLSLVQIHHAQCLLP----------ESSGDNSLDKEL----EPEELE 149
++L C IA+P AQ LLP E G N L +E + ++ E
Sbjct: 11 LVLACYWGIAQPA--------QAQALLPHTLRIDLKKLEQQGVN-LAQEASQLAQFQQYE 61
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
L + K + Q + + VW LG + L++ L I+ L +D N + LG A
Sbjct: 62 LALQRAKLATQLAPKSSEVWALLGALYLQTNALDDGIAALKKAQTLDSKNSAVLFALGSA 121
Query: 210 YFQSGDMEQSAKCFQDLILKDQNHPAALINY--AALLLCKYGSVLAGAGANTGE------ 261
+FQ G QS + + + N P AL + A L+L KY ++ +
Sbjct: 122 HFQKGKYTQSVEYITEGLKVRPNVPGALFDLGNAYLMLRKYPEAISQYDKAIAQDKNFWP 181
Query: 262 -----GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAA 316
G ++ V+ A AA DPKAA +A A Y GD E A
Sbjct: 182 AINNIGLIHYESGNVDEAIRRWQAAADIDPKAAEPRLAIAVATYTKGDREKGLTLGESAI 241
Query: 317 KLEPNCMSTRYA 328
+L+ +RYA
Sbjct: 242 RLD-----SRYA 248
>gi|300868980|ref|ZP_07113584.1| hypothetical protein OSCI_3880037 [Oscillatoria sp. PCC 6506]
gi|300333047|emb|CBN58776.1| hypothetical protein OSCI_3880037 [Oscillatoria sp. PCC 6506]
Length = 725
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 74/190 (38%), Gaps = 20/190 (10%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD-LI 227
WN GL+L + GR++ +I+ + PN + N G A F+ E++ CF + L+
Sbjct: 77 WNNRGLVLYELGRIEEAIASYKQAIKFKPNFHEAWNNRGFALFKLERFEEAIACFDEALV 136
Query: 228 LKDQNHPAALINYAALLLCKYGSVLAG----------------AGANTGEGACLDQASAV 271
+K +H + N + L +G++ A A N G C DQ
Sbjct: 137 IKRDDH--KVWNNRGIALAHFGNLEAALASFDQALAIKSDFYQAWNNRGILLC-DQLGQY 193
Query: 272 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 331
A A+K P W N A D + +KA ++P+ S+
Sbjct: 194 EEALASFDQAIKFKPDYHDAWYNRGIALGHLEDFEGAINSFDKALAIKPDYYSSLSLEKT 253
Query: 332 SRIKDAERSQ 341
+ +K +R
Sbjct: 254 ATVKQLQRDH 263
>gi|443324671|ref|ZP_21053408.1| capsular polysaccharide biosynthesis protein [Xenococcus sp. PCC
7305]
gi|442795712|gb|ELS05062.1| capsular polysaccharide biosynthesis protein [Xenococcus sp. PCC
7305]
Length = 903
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 75/190 (39%), Gaps = 13/190 (6%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+ ++ ++ S+ + QA + LGL+ K + +IS +A+ P + NL
Sbjct: 52 DFDKAITAYHISLGNQPEQAQICAELGLLYSKQKKFTQAISNYQKAIALKPTWAEIYYNL 111
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL---------LCKYGSVL----A 253
+ + + GD EQ+ +Q + N+ AA N L + Y +
Sbjct: 112 AVIWHEVGDWEQTITAYQQAVKHKPNYTAAYFNLGLLYDNRGQWNEAVANYQRAIELQPY 171
Query: 254 GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
A + G+ L + A E L LK DP A + NL +L G + E
Sbjct: 172 NIRAYSNLGSTLARHQKYESAIEVLQQGLKIDPTWATLHNNLGQVLWLEGRLDQALVSFE 231
Query: 314 KAAKLEPNCM 323
A LEP+ +
Sbjct: 232 LALSLEPDMV 241
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 23/186 (12%)
Query: 62 TGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLV 121
T + P A+F LGL+Y GQ +AV++Y++A E L+ A L S +
Sbjct: 126 TAYQQAVKHKPNYTAAYFNLGLLYDNRGQWNEAVANYQRAIE--LQPYNIRAYSNLGSTL 183
Query: 122 QIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGR 181
H ++ E + L++ ++ D A + N LG +L GR
Sbjct: 184 ARH---------------------QKYESAIEVLQQGLKIDPTWATLHNNLGQVLWLEGR 222
Query: 182 LQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYA 241
L ++ L+++P+ NL + Q + +++ Q++ + N+ +A N
Sbjct: 223 LDQALVSFELALSLEPDMVLANHNLSRLWQQESNYDRAFSYLQEVTELEPNNSSAHNNCL 282
Query: 242 ALLLCK 247
++LL K
Sbjct: 283 SILLKK 288
>gi|413936917|gb|AFW71468.1| hypothetical protein ZEAMMB73_864118 [Zea mays]
Length = 517
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 79/195 (40%), Gaps = 14/195 (7%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
+ ++Q+ A+ + L I + G+L +I + + DP + N+G A +G
Sbjct: 10 QRALQARPDYAMAYGNLATIYYEQGQLDMAIRCYNQAIVYDPQFIEAYNNMGNALKDAGR 69
Query: 216 MEQSAKCFQDLILKDQNHPAALINYAALLL------CKYGSVLAGAGANTGEGACLDQAS 269
+E++ C++ + NHP AL N + + A +G + L+ +
Sbjct: 70 VEEAINCYRSCLALQANHPQALTNLGNIYMEWNMISAATSFYKAAISVTSGLSSPLNNLA 129
Query: 270 AV-----NVAK--ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
+ N A C L+ DP AA N N + G + + +AA + PN
Sbjct: 130 VIYKQQGNYADAITCYTEVLRIDPTAADALVNRGNTFKEIGRVNEAIQDYVQAATIRPN- 188
Query: 323 MSTRYAVAVSRIKDA 337
M +A S KD+
Sbjct: 189 MPEAHANLASAYKDS 203
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 15/192 (7%)
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
E +L+ + +++ D + +N +G L +GR++ +I+ S LA+ N+ +
Sbjct: 32 EQGQLDMAIRCYNQAIVYDPQFIEAYNNMGNALKDAGRVEEAINCYRSCLALQANHPQAL 91
Query: 204 GNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALI-----NYAALLLCKYGSVL- 252
NLG Y + + + ++ I L + A+I NYA + C Y VL
Sbjct: 92 TNLGNIYMEWNMISAATSFYKAAISVTSGLSSPLNNLAVIYKQQGNYADAITC-YTEVLR 150
Query: 253 ---AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 309
A A G + VN A + + A P ANLA+AY +G ++
Sbjct: 151 IDPTAADALVNRGNTFKEIGRVNEAIQDYVQAATIRPNMPEAHANLASAYKDSGHVETAI 210
Query: 310 KCLEKAAKLEPN 321
++A +L P+
Sbjct: 211 ISYKQALRLRPD 222
>gi|406983319|gb|EKE04534.1| TPR Domain containing protein [uncultured bacterium]
Length = 257
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 37/186 (19%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI-------------LLRCEADIARPELL 118
P N + + LG +Y +LG+P +A+ SY+KA EI + DIA+
Sbjct: 32 PDNPYLYNNLGTIYYKLGKPDEAIESYKKALEIDPNVQGIYQNLADIYLANEDIAQ---- 87
Query: 119 SLVQIHHAQCLLPESSG-----------DNSLDKELEPEELEEILSKLKESMQSDTRQAV 167
+L+++ HA + P++ G D D + +ELE+++ K + + A
Sbjct: 88 ALIELQHAIIINPDNPGPRYHYARVLMRDFRFDAAI--DELEKVIEKAPNNTDAHYDLAT 145
Query: 168 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
+ + G +IS + + P+N D +L + Y + ++++ K F I
Sbjct: 146 AY-------FQMGNYDGAISEYEKVQEMVPDNADIYYHLAVTYEANDQIDEAIKGFSKAI 198
Query: 228 LKDQNH 233
+Q H
Sbjct: 199 ELNQAH 204
>gi|390958075|ref|YP_006421832.1| Tfp pilus assembly protein PilF [Terriglobus roseus DSM 18391]
gi|390958416|ref|YP_006422173.1| Tfp pilus assembly protein PilF [Terriglobus roseus DSM 18391]
gi|390412993|gb|AFL88497.1| Tfp pilus assembly protein PilF [Terriglobus roseus DSM 18391]
gi|390413334|gb|AFL88838.1| Tfp pilus assembly protein PilF [Terriglobus roseus DSM 18391]
Length = 580
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 133/325 (40%), Gaps = 53/325 (16%)
Query: 29 MDSALEFGVDADGDQSGLGTSSSSR---EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMY 85
+ +A+E G + LGT ++ + E+ + L+ L R +P AHAH LG +
Sbjct: 157 LKAAVERGETSAALLDALGTVTAQQRRYEQAEAQLEAALTADVRYVP--AHAH--LGSVL 212
Query: 86 QRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEP 145
L QP A S ++KA ++ A A+ +LV+++ A
Sbjct: 213 LALHQPAPAASEFKKAVDLGDASSATAAQFGR-ALVELNRA------------------- 252
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
++ ++ L+ ++Q D + L L G +S+++ + +A +P N + + N
Sbjct: 253 ---DDAVAVLEPALQRDPSSLHLMYALALARQAQGDAAASLALFAKFVAAEPENAEALTN 309
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
G+A Q+GD + +Q + N ALL G A L
Sbjct: 310 YGLALVQTGDAAGGLRRYQAALAHSDN---------ALLRQNIGV------------AYL 348
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
Q S ++ A E A L +P + + +L A L D + L K +L+PN
Sbjct: 349 QQ-SDLDHALEQFRAGLAKEPGSVQLHYDLGLALKLKDDVAGATAELRKTEELDPNLPDA 407
Query: 326 RYAVAVSRIKDAERSQEPTEQLSWA 350
Y + V ++ R QE +QL A
Sbjct: 408 PYTLGVLEMQQG-RFQEAAQQLQKA 431
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%)
Query: 171 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 230
TLG++ ++ GR Q + L + ++P+N + LG Y Q G+ E++A+ + I
Sbjct: 410 TLGVLEMQQGRFQEAAQQLQKAVMLEPHNGEAWALLGSVYRQGGESEKAAEALRQAIKLQ 469
Query: 231 QNHPAALINYAALL 244
+ P I A+++
Sbjct: 470 PDAPGPHITLASVM 483
>gi|311747683|ref|ZP_07721468.1| hypothetical protein ALPR1_15169 [Algoriphagus sp. PR1]
gi|126575671|gb|EAZ79981.1| hypothetical protein ALPR1_15169 [Algoriphagus sp. PR1]
Length = 315
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 101/215 (46%), Gaps = 22/215 (10%)
Query: 39 ADGDQSGLGTSSSSREEKVSSLKTGLVHVARKM--------PKNAHAHFLLGLMYQRLGQ 90
+DG Q + S + ++ L G + AR+ K+ ++FL GL+ ++L
Sbjct: 89 SDGIQVNQSSFESYFQRGLAYLDNGEFYKAREDAQQLVQMDSKSWKSYFLTGLVEEKLNN 148
Query: 91 PLKAVSSYEKAEEI------LLRCEADIARPELLS---LVQIHHAQCLLPESSGDNSLDK 141
+A++S+EKA E+ LL +A + E S L+ + A+ + P ++L
Sbjct: 149 YPQALASFEKAVELDPTNSDLLVNQATLLYYEQKSEEALIILDKAEEVNPAEPNLHNLRS 208
Query: 142 --ELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNN 199
+ E +E L + +++ + QA +N GL ++ +G L+ + +++ + ++ NN
Sbjct: 209 MIYFDRESYQEALDAVNKAIALNNTQAYFYNNKGLYMMFTGDLEGGLDLVNQSIKMNENN 268
Query: 200 CDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP 234
+ N GI Y +GD Q L ++N+P
Sbjct: 269 PYALRNKGIYYVLTGD---KVTALQYLAELNENYP 300
>gi|429751740|ref|ZP_19284648.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 326
str. F0382]
gi|429180085|gb|EKY21315.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 326
str. F0382]
Length = 448
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 62/164 (37%), Gaps = 15/164 (9%)
Query: 180 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 239
G +Q + S L+ L +P LG Y GD + + +C I+ D A
Sbjct: 177 GDVQEATSFLNHYLDQNPYCEVAWYYLGRLYLAIGDYKNALRCLDFAIISDDTFTGAYFE 236
Query: 240 YAALL---------LCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADP 286
A +L + Y L A A G C ++ A+E A DP
Sbjct: 237 KARVLEMMEDYEKAIENYKITLTLDDPSALAYLHIGRCYEKMHNDTKAEEYYFRATHEDP 296
Query: 287 KAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN--CMSTRYA 328
+ W LA+ YYL +H + K ++K EPN RYA
Sbjct: 297 QLDKAWITLADFYYLRHNHSKALKYIQKVLTFEPNEPYYWRRYA 340
>gi|408790965|ref|ZP_11202576.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira meyeri
serovar Hardjo str. Went 5]
gi|408464994|gb|EKJ88718.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira meyeri
serovar Hardjo str. Went 5]
Length = 700
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 23/206 (11%)
Query: 46 LGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKA---- 101
LGT RE+ + V R +A +++ LGL+Y + P +A ++KA
Sbjct: 292 LGTIFYQRED-YDRAEFYFREVIRLKTNDAKSYYNLGLVYLKKKVPEEAAKYFQKALDSN 350
Query: 102 --EEILLRCEADIARPELLSLVQIHHA-----QCLLPESSGDNSL-------DKELEPEE 147
E + R AD LS+ Q + A + LL + S +SL K+ E E
Sbjct: 351 ANEPEVYRYIADA----FLSMGQTNMAITALKKALLLKPSDVDSLFALSELYYKKGELVE 406
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
E + ++ DT + LG+IL + R SI+ LA++P N NLG
Sbjct: 407 AESLFRRIIRLTPGDTYSETAYVNLGIILDEMERYSESITSFEGALALNPKNQSAYYNLG 466
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNH 233
+AY +G + + + D NH
Sbjct: 467 LAYLHAGKPTMAIESLRKSQALDPNH 492
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 83/204 (40%), Gaps = 21/204 (10%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
EE ++++ S+ + V+ + L G+ +I+ L L + P++ D + L
Sbjct: 337 EEAAKYFQKALDSNANEPEVYRYIADAFLSMGQTNMAITALKKALLLKPSDVDSLFALSE 396
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
Y++ G++ ++ F+ +I + Y L G LD+
Sbjct: 397 LYYKKGELVEAESLFRRIIRLTPGDTYSETAYVNL------------------GIILDEM 438
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 328
+ + AL +PK + NL AY G + + L K+ L+PN +R A
Sbjct: 439 ERYSESITSFEGALALNPKNQSAYYNLGLAYLHAGKPTMAIESLRKSQALDPNHTQSRLA 498
Query: 329 VAVSRIKDAERSQ---EPTEQLSW 349
+A +++ S+ E E ++W
Sbjct: 499 IADYYLENRFYSEAIAEYEEAIAW 522
>gi|406953657|gb|EKD82827.1| TPR Domain containing protein, partial [uncultured bacterium]
Length = 1487
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 110/251 (43%), Gaps = 20/251 (7%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E+ +++ L+E+ Q+ + + + ++G + +I L +L++ DP+N
Sbjct: 650 EDFAQVIEILQEARQTQPGNNEISSIISEAYARTGDHEMAILELKTLISNDPSNTQARIQ 709
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
LG Y S ++Q++ F+D+I + ++P A + G + G + + + +
Sbjct: 710 LGRVYSISNMIDQASMTFKDIIADEPDNPVA--------RTELGCIYLSMGNSYSDSSMI 761
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP-NCMS 324
+ S VN K ALK DP++A+ L AY+ G + + +L+P +
Sbjct: 762 E--SGVNELK----TALKLDPQSANAHYELGKAYHDLGKVDEALSEFTRVLELDPLHIQG 815
Query: 325 TRYAVAVSRIKDAERSQEPTEQ---LSWAGNEMASILREGDPVQIEPP--IAWAGFAAVQ 379
Y ++ +K + ++ + +Q S G ++L ++I+P +AW +
Sbjct: 816 KEYYNSLVHVKVSSQANDGIKQARIFSERGMFKNAVLEYEKVIEIQPENQVAWYELGNLH 875
Query: 380 KTHHEVAAAFE 390
T A E
Sbjct: 876 FTMENYDKALE 886
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 69/161 (42%), Gaps = 21/161 (13%)
Query: 170 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 229
NTLG + L++G+ +I + +++ P+N D +LG Y Q +++ F I
Sbjct: 29 NTLGSLYLQTGQTDQAIEIYDRAISLAPDNKDLQFDLGQLYLQRNSFDKAEMHFNRAIDI 88
Query: 230 DQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAA 289
D+ A+I A L + + D SAV + ++ A++ D A
Sbjct: 89 DKKFTGAIIELARLKITQN-----------------DIDSAVTLYQQ----AIENDQDNA 127
Query: 290 HIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
+ A L AY +G + + KA L+PN + +A
Sbjct: 128 ILHAELGEAYEFSGLYNDAMMEYRKAEYLDPNNPDIHFKIA 168
>gi|413936918|gb|AFW71469.1| hypothetical protein ZEAMMB73_864118 [Zea mays]
Length = 706
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 79/195 (40%), Gaps = 14/195 (7%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
+ ++Q+ A+ + L I + G+L +I + + DP + N+G A +G
Sbjct: 10 QRALQARPDYAMAYGNLATIYYEQGQLDMAIRCYNQAIVYDPQFIEAYNNMGNALKDAGR 69
Query: 216 MEQSAKCFQDLILKDQNHPAALINYAALLL------CKYGSVLAGAGANTGEGACLDQAS 269
+E++ C++ + NHP AL N + + A +G + L+ +
Sbjct: 70 VEEAINCYRSCLALQANHPQALTNLGNIYMEWNMISAATSFYKAAISVTSGLSSPLNNLA 129
Query: 270 AV-----NVAK--ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
+ N A C L+ DP AA N N + G + + +AA + PN
Sbjct: 130 VIYKQQGNYADAITCYTEVLRIDPTAADALVNRGNTFKEIGRVNEAIQDYVQAATIRPN- 188
Query: 323 MSTRYAVAVSRIKDA 337
M +A S KD+
Sbjct: 189 MPEAHANLASAYKDS 203
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 15/192 (7%)
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
E +L+ + +++ D + +N +G L +GR++ +I+ S LA+ N+ +
Sbjct: 32 EQGQLDMAIRCYNQAIVYDPQFIEAYNNMGNALKDAGRVEEAINCYRSCLALQANHPQAL 91
Query: 204 GNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALI-----NYAALLLCKYGSVL- 252
NLG Y + + + ++ I L + A+I NYA + C Y VL
Sbjct: 92 TNLGNIYMEWNMISAATSFYKAAISVTSGLSSPLNNLAVIYKQQGNYADAITC-YTEVLR 150
Query: 253 ---AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 309
A A G + VN A + + A P ANLA+AY +G ++
Sbjct: 151 IDPTAADALVNRGNTFKEIGRVNEAIQDYVQAATIRPNMPEAHANLASAYKDSGHVETAI 210
Query: 310 KCLEKAAKLEPN 321
++A +L P+
Sbjct: 211 ISYKQALRLRPD 222
>gi|340505436|gb|EGR31763.1| hypothetical protein IMG5_102630 [Ichthyophthirius multifiliis]
Length = 355
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 22/138 (15%)
Query: 185 SISVLSSLLAVDPNNCDCI-GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL 243
+I ++A N D I NLG +++ GD++QS +++ + Q P L
Sbjct: 30 AIQYYKQIIASSSQNIDDIHYNLGNCFYKKGDVDQSIIHYKNALEIKQQKPDCL------ 83
Query: 244 LLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTG 303
N G C+ Q A++C A+K DP+ + NLAN YY+ G
Sbjct: 84 -------------YNLGNAYCIKQNYE--KAQKCFQKAIKFDPQNSSAIYNLANTYYVLG 128
Query: 304 DHRSSGKCLEKAAKLEPN 321
+ + K E A KLE N
Sbjct: 129 NSEQAAKQFEIALKLEQN 146
>gi|213962696|ref|ZP_03390957.1| tetratricopeptide TPR_2 repeat protein [Capnocytophaga sputigena
Capno]
gi|213954691|gb|EEB66012.1| tetratricopeptide TPR_2 repeat protein [Capnocytophaga sputigena
Capno]
Length = 447
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 62/164 (37%), Gaps = 15/164 (9%)
Query: 180 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 239
G +Q + S L+ L +P LG Y GD + + +C I+ D A
Sbjct: 177 GDVQEATSFLNHYLDQNPYCEVAWYYLGRLYLAIGDYKNALRCLDFAIISDDTFTGAYFE 236
Query: 240 YAALL---------LCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADP 286
A +L + Y L A A G C ++ A+E A DP
Sbjct: 237 KARVLEMMEDYEKAIENYKITLTLDDPSALAYLHIGRCYEKMHNDTKAEEYYFRATHEDP 296
Query: 287 KAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN--CMSTRYA 328
+ W LA+ YYL +H + K ++K EPN RYA
Sbjct: 297 QLDKAWITLADFYYLRHNHSKALKYIQKVLTFEPNEPYYWRRYA 340
>gi|91202600|emb|CAJ72239.1| hypothetical protein kustd1494 [Candidatus Kuenenia
stuttgartiensis]
Length = 847
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 100/256 (39%), Gaps = 46/256 (17%)
Query: 73 KNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPE 132
+ A H+ +G Y++ Q +A+SSY+KA L+ + D +
Sbjct: 561 RYATVHYNMGNAYKKKNQLPQAISSYKKA----LQIKQDYKQ------------------ 598
Query: 133 SSGDNSLDK-ELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
N+L K E E+ ++ + ++ D A N LG++ K G + +I+
Sbjct: 599 --AHNNLGKIYFEMEQYDDAFEEYNTALAIDPGFADAHNNLGVLYNKRGMDEDAIAAYKK 656
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 251
+A DP N D NLG Y E + + +Q + DQ
Sbjct: 657 AVAADPLNSDAYYNLGNVYESKNQFELAVEAYQSALAIDQ-------------------- 696
Query: 252 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 311
A A A+ GA D+ ++ A E A+K DP + NL + GD S+
Sbjct: 697 -ALAYAHNNLGALYDKKGILDKAIEEYRQAIKYDPLYPYAHNNLGASLAKKGDMDSALSE 755
Query: 312 LEKAAKLEPNCMSTRY 327
++A L P+ R+
Sbjct: 756 FQEAVHLLPDNPDFRF 771
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 93/232 (40%), Gaps = 36/232 (15%)
Query: 16 NKLGKCRSRISSKMDSALEFGV---------DADGDQSGLGTSSSSREEKVSSLKTGLVH 66
N LGK + D+ E+ DA + L E+ +++ K +
Sbjct: 601 NNLGKIYFEMEQYDDAFEEYNTALAIDPGFADAHNNLGVLYNKRGMDEDAIAAYKKAVA- 659
Query: 67 VARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHA 126
P N+ A++ LG +Y+ Q AV +Y+ A I D A L H+
Sbjct: 660 ---ADPLNSDAYYNLGNVYESKNQFELAVEAYQSALAI------DQA------LAYAHNN 704
Query: 127 QCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSI 186
L + G LDK +E + +++++ D N LG L K G + S++
Sbjct: 705 LGALYDKKG--ILDKAIE---------EYRQAIKYDPLYPYAHNNLGASLAKKGDMDSAL 753
Query: 187 SVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALI 238
S + + P+N D NLG + + G+ + + F++ I +H AL
Sbjct: 754 SEFQEAVHLLPDNPDFRFNLGYVFLRMGNNALALQAFEETIRIKPSHTEALF 805
>gi|186682271|ref|YP_001865467.1| hypothetical protein Npun_R1867 [Nostoc punctiforme PCC 73102]
gi|186464723|gb|ACC80524.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
73102]
Length = 409
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 111/277 (40%), Gaps = 42/277 (15%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P ++ A+F LGL RL Q A++ Y+KA L E + A +L + Q L
Sbjct: 114 PHDSGAYFNLGLTLARLNQLEPAIAQYKKA----LSLEPNYADAHY-NLGNALYTQGKLT 168
Query: 132 ESSGDNSLDKELEPE----------------ELEEILSKLKESMQSDTRQAVVWNTLGLI 175
E+ + + L+P EL E +++ K+S+ D + A LG
Sbjct: 169 EAVTEYTAAIRLKPSYAPTYTRLGNALYDRGELAEAVTQYKKSISFDPKYADAHYYLGNA 228
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
L G+ +I+ ++ + + P N LG + G +E++ ++ + + N+
Sbjct: 229 LYAQGKSAEAIAEYTAAIRLSPKNPAGYNALGNTLYAQGKLEEAIAQYKQALNLEPNYAD 288
Query: 236 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 295
A N A+ + G + A D A+ + DPK A + L
Sbjct: 289 AHYNLASAFYAQ-GKLTE---------AITDYTEAIRI-----------DPKHAQAYTGL 327
Query: 296 ANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 332
ANA G + + +KA L PN T Y + ++
Sbjct: 328 ANAMDDQGKPQEAIAHYKKAISLVPNDAFTYYNLGIT 364
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 137 NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVD 196
N+LD + +P+E ++ K+++ D + + LGL L + +L+ +I+ L+++
Sbjct: 91 NTLDDQGKPQE---AIAHYKKAISLDPHDSGAYFNLGLTLARLNQLEPAIAQYKKALSLE 147
Query: 197 PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-LKDQNHPA------ALINYAAL--LLCK 247
PN D NLG A + G + ++ + I LK P AL + L + +
Sbjct: 148 PNYADAHYNLGNALYTQGKLTEAVTEYTAAIRLKPSYAPTYTRLGNALYDRGELAEAVTQ 207
Query: 248 YGSVL------AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYL 301
Y + A A G SA +A+ AA++ PK + L N Y
Sbjct: 208 YKKSISFDPKYADAHYYLGNALYAQGKSAEAIAEYT--AAIRLSPKNPAGYNALGNTLYA 265
Query: 302 TGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
G + ++A LEPN Y +A
Sbjct: 266 QGKLEEAIAQYKQALNLEPNYADAHYNLA 294
>gi|330508351|ref|YP_004384779.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
gi|328929159|gb|AEB68961.1| TPR-repeat protein [Methanosaeta concilii GP6]
Length = 440
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 72/188 (38%), Gaps = 13/188 (6%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+ +E + E+++ D W G+ L G+ +I + +DP + GN
Sbjct: 175 KYDEAIEAYDEAIRLDPANVAAWGNKGVSLADQGKYDEAIEAYDEAIRLDPTDAAVWGNK 234
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL--CKYGSVL-----------A 253
G++ G +++ + + + I D A N L+ KY + A
Sbjct: 235 GVSLADQGKHDEAIEAYDEAIRLDPTDAAVWGNKGVSLVDQGKYDEAIEAYDEAIRLDPA 294
Query: 254 GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
A A +G L + A E A++ DP A W N N+ + S K +
Sbjct: 295 NAAAWGNKGVSLADQGKYDEAIEAYDEAIRLDPTDATAWFNKGNSLNKQKKYDESIKAYD 354
Query: 314 KAAKLEPN 321
+A +L P+
Sbjct: 355 EAIRLNPD 362
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/183 (18%), Positives = 70/183 (38%), Gaps = 21/183 (11%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E + E+++ D A VW G+ L+ G+ +I + +DP N GN G+
Sbjct: 245 DEAIEAYDEAIRLDPTDAAVWGNKGVSLVDQGKYDEAIEAYDEAIRLDPANAAAWGNKGV 304
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
+ G +++ + + + I D A N +G L++
Sbjct: 305 SLADQGKYDEAIEAYDEAIRLDPTDATAWFN---------------------KGNSLNKQ 343
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 328
+ + + A++ +P A W N+ G H + + ++A +L+ + Y
Sbjct: 344 KKYDESIKAYDEAIRLNPDLAEPWIGKGNSLDDQGKHDEAIQAYDEAIRLDSTDANAWYN 403
Query: 329 VAV 331
V
Sbjct: 404 KGV 406
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 88/239 (36%), Gaps = 25/239 (10%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+ +E + E+++ D A W+ G+ G+ +I + +DP + GN
Sbjct: 39 KYDEAIKAYDEAIRLDPTIAAAWSNKGVAFADQGKHDEAIEAYDEAIRLDPTDAAAWGNK 98
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVLAGA----GAN-- 258
G + G +++ + + + I D A N L KY + G N
Sbjct: 99 GASLADQGKYDEAIEAYDEAIRLDPTDAIAWFNKGNSLNKQKKYDESIKAYDEAIGLNPV 158
Query: 259 -----TGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
G+G L + A E A++ DP W N + G + + + +
Sbjct: 159 LAEPWIGKGKSLADQGKYDEAIEAYDEAIRLDPANVAAWGNKGVSLADQGKYDEAIEAYD 218
Query: 314 KAAKLEPNCMSTRYAVAVSRIKDAERSQ-----------EPTEQLSWAGNEMASILREG 361
+A +L+P + VS + + +PT+ W GN+ S++ +G
Sbjct: 219 EAIRLDPTDAAVWGNKGVSLADQGKHDEAIEAYDEAIRLDPTDAAVW-GNKGVSLVDQG 276
>gi|435853473|ref|YP_007314792.1| Tfp pilus assembly protein PilF [Halobacteroides halobius DSM 5150]
gi|433669884|gb|AGB40699.1| Tfp pilus assembly protein PilF [Halobacteroides halobius DSM 5150]
Length = 250
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 23/141 (16%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P + H++LGL Y RL + A + EKA +I PE H + L+
Sbjct: 62 PDLLYPHYILGLSYDRLEKYSFAETQLEKAHQI---------NPE--------HYRVLI- 103
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+ G LD+ +++E + LK ++Q Q +N LG +K G L+ SI
Sbjct: 104 -NLGRVYLDQG----KIKEAIKVLKRAIQVKQDQDEAYNILGRAYMKQGLLKKSIKYYKQ 158
Query: 192 LLAVDPNNCDCIGNLGIAYFQ 212
+ + NC I NLG+AY +
Sbjct: 159 AVHKNKKNCYAINNLGLAYIR 179
>gi|383791819|ref|YP_005476393.1| Tfp pilus assembly protein PilF [Spirochaeta africana DSM 8902]
gi|383108353|gb|AFG38686.1| Tfp pilus assembly protein PilF [Spirochaeta africana DSM 8902]
Length = 1107
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 26/183 (14%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E + L+ ++ D + LG+ L+ GRL+ + L P D + NLGI
Sbjct: 157 EAVRMLEAGLEHDENHPTLRYNLGISQLELGRLEDARDSFVRALRSRPGWVDALNNLGIV 216
Query: 210 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVLAGAGANTGEGACLDQ 267
+ + E++ + F++++ + +P AL N A++L L KY
Sbjct: 217 LQRLEEYEEAQRVFEEILSIESENPRALNNIASILSHLGKY------------------- 257
Query: 268 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 327
A E L +L+ DP ANL T D R + L K + L P RY
Sbjct: 258 ----EEAGEYLRRSLRRDPSYRKAAANLGQVLART-DGRGYLEELRKLSALSPQNTDLRY 312
Query: 328 AVA 330
+A
Sbjct: 313 QLA 315
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 39/183 (21%)
Query: 65 VHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIH 124
+ + + P + HAH +LG +Y + ++EKAE
Sbjct: 27 LELVEEYPYSWHAHMMLGTIYTQ-------QRAFEKAEN------------------SFR 61
Query: 125 HAQCLLPESS-GDNSL-------DKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLIL 176
A L PE++ G N+L D+ LE L + ++ +A + LG IL
Sbjct: 62 TAIKLQPENAEGYNNLAVLYRHQDR------LEHALELARTALSFAPERADILYNLGNIL 115
Query: 177 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 236
+SG + ++ + S + DP NLG Y SG ++ + + + D+NHP
Sbjct: 116 KRSGDIDAARAAYSDAIHRDPGFVMAYNNLGTLYEHSGQHPEAVRMLEAGLEHDENHPTL 175
Query: 237 LIN 239
N
Sbjct: 176 RYN 178
>gi|159028889|emb|CAO90694.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 1271
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 116/303 (38%), Gaps = 46/303 (15%)
Query: 56 KVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARP 115
++ S K + + P A ++ LG + + GQ +A+S Y++A E ++P
Sbjct: 1013 ELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLEEAISYYQQAIE---------SQP 1063
Query: 116 ELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLI 175
+ P + + L E + +E E+ ++ S+Q D+ V+ +L +
Sbjct: 1064 DY-------------PSAFYNLGLVYE-QLKETEKAIACYSHSVQLDSTNVEVYKSLAQL 1109
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
+ + L + P+N + NLG+ ++ +++ CFQ +I Q P
Sbjct: 1110 YDRQENYAKAEKYYRCALLLQPHNLELRYNLGVVLYEQEKFDKAVSCFQKII---QAKPQ 1166
Query: 236 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 295
I Y L G Q + AK C A++ DP A + NL
Sbjct: 1167 DAIAYLHL------------------GISYKQQKLLTKAKSCFEKAIELDPDYAMAYYNL 1208
Query: 296 ANAYYLTGDHRSSGKCLEKAAKLEP--NCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNE 353
Y D + + C ++ + +P T A+S IK+ + W N+
Sbjct: 1209 GVVYSCQPDEKKAVDCFRQSLRCDPANKLAHTALLFALSGIKEVSSEEIYDASSRWYRNK 1268
Query: 354 MAS 356
+ +
Sbjct: 1269 IQT 1271
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 63/166 (37%), Gaps = 21/166 (12%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
A ++ LG +G L+S+ + + VDP NLG Q G +E++ +Q
Sbjct: 998 AAYYHQLGREKTLTGELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLEEAISYYQQ 1057
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 285
I ++P+A N G +Q A C +++ D
Sbjct: 1058 AIESQPDYPSAFYNL---------------------GLVYEQLKETEKAIACYSHSVQLD 1096
Query: 286 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 331
++ +LA Y ++ + K A L+P+ + RY + V
Sbjct: 1097 STNVEVYKSLAQLYDRQENYAKAEKYYRCALLLQPHNLELRYNLGV 1142
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 91/221 (41%), Gaps = 30/221 (13%)
Query: 46 LGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEIL 105
L EE +S + + P A + LGL+Y++L + KA++ Y + ++
Sbjct: 1041 LAAQQGQLEEAISYYQQAI----ESQPDYPSAFYNLGLVYEQLKETEKAIACYSHSVQL- 1095
Query: 106 LRCEADIARPELL-SLVQIHHAQ-----------CLLPESSGDNSLDKEL-----EPEEL 148
D E+ SL Q++ Q C L + L L E E+
Sbjct: 1096 -----DSTNVEVYKSLAQLYDRQENYAKAEKYYRCALLLQPHNLELRYNLGVVLYEQEKF 1150
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
++ +S ++ +Q+ + A+ + LG+ + L + S + +DP+ NLG+
Sbjct: 1151 DKAVSCFQKIIQAKPQDAIAYLHLGISYKQQKLLTKAKSCFEKAIELDPDYAMAYYNLGV 1210
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYG 249
Y D +++ CF+ + D PA + + ALL G
Sbjct: 1211 VYSCQPDEKKAVDCFRQSLRCD---PANKLAHTALLFALSG 1248
>gi|304315338|ref|YP_003850485.1| tetratricopeptide repeat domain-containing protein
[Methanothermobacter marburgensis str. Marburg]
gi|302588797|gb|ADL59172.1| tetratricopeptide repeat domain-containing protein
[Methanothermobacter marburgensis str. Marburg]
Length = 386
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 116/305 (38%), Gaps = 31/305 (10%)
Query: 177 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 236
LK G+ + ++ L PN+ + + + + E++ +C++ ++ + A
Sbjct: 27 LKQGKYKEALKEFRKALKASPNDPEILHYNAMTLLKLKRPEKALECYEKILKNNPKLAEA 86
Query: 237 LINYAALL--LCKYGSVLA-----------GAGANTGEGACLDQASAVNVAKECLLAALK 283
N +L L +Y L G +GA LD A EC AL+
Sbjct: 87 WNNKGVVLKELKRYDEALECYERALQIDPEDDGTWNNKGALLDTIGKPEKAIECYEKALE 146
Query: 284 ADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEP 343
+ K A W N N G + + +C EKA ++ + Y A+ +++ +R E
Sbjct: 147 INQKNAKAWYNKGNGLRSLGKYEEALECYEKALQINAEFVEAWYNKALI-LEELKRYDEA 205
Query: 344 TEQLSWAGNEMASILREGDPVQIEPPI--AWAGFAAVQKTHHEVAAAFETEEN--ELSKM 399
E A +QI+P W A+ T + A E E E+++
Sbjct: 206 LECYERA-------------LQIDPEDDGTWNNKGALLDTIGKPEKAIECYEKALEINQK 252
Query: 400 EECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 459
A + L++ + A EC AL+ + + WAN G + + +C E
Sbjct: 253 NAKAWNNKGVVLEELKRYDEALECYEKALEINLENDETWANKGVLLRKLGKYEEALECFE 312
Query: 460 KVLMV 464
K L +
Sbjct: 313 KALEI 317
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 90/239 (37%), Gaps = 44/239 (18%)
Query: 82 GLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDK 141
G + +G+P KA+ YEKA EI +A+ + +G SL K
Sbjct: 125 GALLDTIGKPEKAIECYEKALEI-----------------NQKNAKAWYNKGNGLRSLGK 167
Query: 142 ELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCD 201
EE L ++++Q + W LIL + R ++ L +DP +
Sbjct: 168 ------YEEALECYEKALQINAEFVEAWYNKALILEELKRYDEALECYERALQIDPEDDG 221
Query: 202 CIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGE 261
N G G E++ +C++ + +Q + A N +
Sbjct: 222 TWNNKGALLDTIGKPEKAIECYEKALEINQKNAKAWNN---------------------K 260
Query: 262 GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
G L++ + A EC AL+ + + WAN G + + +C EKA ++ P
Sbjct: 261 GVVLEELKRYDEALECYEKALEINLENDETWANKGVLLRKLGKYEEALECFEKALEINP 319
>gi|220907898|ref|YP_002483209.1| hypothetical protein Cyan7425_2491 [Cyanothece sp. PCC 7425]
gi|219864509|gb|ACL44848.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
Length = 689
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 106/267 (39%), Gaps = 44/267 (16%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P + AH+ LG Q+ G P AVS Y +A ++ +P+L+ A C L
Sbjct: 137 PDLSLAHYKLGTALQQQGDPKAAVSCYLQALQL---------QPDLVV------AHCNL- 180
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
G LD +LE ++ + ++Q LGL +++ +I+
Sbjct: 181 ---GSAYLDLG----QLEAAITAFQSALQLQPDHTGALFNLGLARQTQQQMREAIACYEK 233
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 251
++ ++P N + NLG AY G E++ F+ AL L G
Sbjct: 234 VIQLEPQNSEVYNNLGNAYLAVGQPERAIDVFR--------WATALKPDDLTLWYNLGKT 285
Query: 252 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 311
L TG AC A+N P+ ++I L +A GD ++
Sbjct: 286 LLEQADWTGAAACFRHVLALN-------------PQLSYIHVLLGSALVGQGDLPAASAA 332
Query: 312 LEKAAKLEPNCMSTRYAVAVSRIKDAE 338
++A KL+P ++ + +A + ++ E
Sbjct: 333 YQQALKLDPELVAAHHGIASALLESGE 359
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 78/200 (39%), Gaps = 13/200 (6%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
EL E + +Q Q LG+I + G ++++IS + V P D NL
Sbjct: 19 ELAEASQLYQRVLQQHPGQLDALQVLGMIAAQQGDVETAISYFRQAVQVAPAQADLHYNL 78
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN----------YAALLLCKYGSVLAGAG 256
G A GD + +Q + ++NH AA N YA + C ++
Sbjct: 79 GYALEAWGDGPAAIAAYQQALKLNRNHLAACYNLGELHLQRGEYAGAIPCFQWAIQLQPD 138
Query: 257 ---ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
A+ G L Q A C L AL+ P NL +AY G ++ +
Sbjct: 139 LSLAHYKLGTALQQQGDPKAAVSCYLQALQLQPDLVVAHCNLGSAYLDLGQLEAAITAFQ 198
Query: 314 KAAKLEPNCMSTRYAVAVSR 333
A +L+P+ + + ++R
Sbjct: 199 SALQLQPDHTGALFNLGLAR 218
>gi|430741335|ref|YP_007200464.1| hypothetical protein Sinac_0326 [Singulisphaera acidiphila DSM
18658]
gi|430013055|gb|AGA24769.1| tetratricopeptide repeat protein [Singulisphaera acidiphila DSM
18658]
Length = 779
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 73/178 (41%), Gaps = 23/178 (12%)
Query: 62 TGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLV 121
T R P +A A+F G + + K ++ Y +A +R + D A P +
Sbjct: 194 TDYNEAIRLDPDDASAYFNRGYAWSKKKDYDKTIADYNEA----IRLDPDDA-PTYFNRA 248
Query: 122 QIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGR 181
HA + E+ ++ ++ E+++ D A + G + G
Sbjct: 249 ---HAWS---------------QKEDYDKTIADYNEAIRLDPDDASAYFNRGHAWSQKGD 290
Query: 182 LQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 239
L +I+ + + +DP N N G A+ Q GD++++ F + I D N +A +N
Sbjct: 291 LDKAIADYNETIRLDPTNTPAYFNRGYAWNQKGDLDKAIADFDEAIRLDPNDASAYVN 348
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 79/410 (19%), Positives = 150/410 (36%), Gaps = 60/410 (14%)
Query: 53 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 112
+EE ++ + R P +A A+F G + + KA++ Y +A +R +
Sbjct: 121 KEEDIAEYDEAI----RLNPNDASAYFNRGYAWSERQEYDKAIADYNEA----IRLD--- 169
Query: 113 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 172
P+L + H+ S N DK ++ E+++ D A +
Sbjct: 170 --PQLT--LAYHNRGYAW---SQKNDYDK---------AITDYNEAIRLDPDDASAYFNR 213
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
G K +I+ + + +DP++ N A+ Q D +++ + + I D +
Sbjct: 214 GYAWSKKKDYDKTIADYNEAIRLDPDDAPTYFNRAHAWSQKEDYDKTIADYNEAIRLDPD 273
Query: 233 HPAALINYAALL---------LCKYGSVLAGAGANT----GEGACLDQASAVNVAKECLL 279
+A N + Y + NT G +Q ++ A
Sbjct: 274 DASAYFNRGHAWSQKGDLDKAIADYNETIRLDPTNTPAYFNRGYAWNQKGDLDKAIADFD 333
Query: 280 AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAER 339
A++ DP A + N A+ G+H + +A +L+P T ++R
Sbjct: 334 EAIRLDPNDASAYVNQGCAWGEKGEHDKAIADFNEAIRLDP----TNTWAYLNRSHAWSE 389
Query: 340 SQEPTEQLSWAGNEMASILREGDPVQIEPPIAWA----GFAAVQKTHHEVAAAFETEENE 395
+E + ++ NE+ ++++P AWA G+A +K H+ A A + E
Sbjct: 390 KEEYDKAIA-DANEI---------IRLDPQNAWAYFKRGYAWGKKKEHDKAIADDNEAIR 439
Query: 396 LSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 445
L A D+ + A A++ DP + WA Y
Sbjct: 440 LDPTNAWAYLNRGYAWDEKEEHDKAITDFNKAIRLDP--TNTWAYFNRGY 487
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 85/211 (40%), Gaps = 17/211 (8%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
+E ++ ++ E+++ D A + G + +I+ + + +DP N N
Sbjct: 425 KEHDKAIADDNEAIRLDPTNAWAYLNRGYAWDEKEEHDKAITDFNKAIRLDPTNTWAYFN 484
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN--YAALLLCKYGSVLA---------- 253
G A+ Q D +++ F + I D N+ +A +N YA Y +A
Sbjct: 485 RGYAWGQKEDYDKAIADFNEAIQLDPNYTSAYLNRGYAWSQKNDYDKAIADFNKAIRLDP 544
Query: 254 -GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 312
A A G Q + A A++ DP A + N +A T +H +
Sbjct: 545 INAPAYFNRGHAWSQKEGYDKAIADYNEAIRLDPNNALAYLNRGHARSKTQEHDKAIADY 604
Query: 313 EKAAKLEP---NCMSTRYAVAVSRIKDAERS 340
+A +++P N R A+ SR KD +++
Sbjct: 605 NEAIRIDPKAANAYIYR-AITWSRKKDYDKA 634
>gi|443646867|ref|ZP_21129545.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
DIANCHI905]
gi|443335696|gb|ELS50160.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
DIANCHI905]
Length = 1254
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 116/303 (38%), Gaps = 46/303 (15%)
Query: 56 KVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARP 115
++ S K + + P A ++ LG + + GQ +A+S Y++A E ++P
Sbjct: 996 ELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLEEAISYYQQAIE---------SQP 1046
Query: 116 ELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLI 175
+ P + + L E + +E E+ ++ S+Q D+ V+ +L +
Sbjct: 1047 DY-------------PSAFYNLGLVYE-QLKETEKAIACYSHSVQLDSTNVEVYKSLAQL 1092
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
+ + L + P+N + NLG+ ++ +++ CFQ +I Q P
Sbjct: 1093 YDRQENYAKAEKYYRCALLLQPHNLELRYNLGVVLYEQEKFDKAVSCFQKII---QAKPQ 1149
Query: 236 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 295
I Y L G Q + AK C A++ DP A + NL
Sbjct: 1150 DAIAYLHL------------------GISYKQQKLLTKAKSCFEKAIELDPDYAMAYYNL 1191
Query: 296 ANAYYLTGDHRSSGKCLEKAAKLEP--NCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNE 353
Y D + + C ++ + +P T A+S IK+ + W N+
Sbjct: 1192 GVVYSCQPDEKKAVDCFRQSLRCDPANKLAHTALLFALSGIKEVSSEEIYDASSRWYRNK 1251
Query: 354 MAS 356
+ +
Sbjct: 1252 IQT 1254
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 63/166 (37%), Gaps = 21/166 (12%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
A ++ LG +G L+S+ + + VDP NLG Q G +E++ +Q
Sbjct: 981 AAYYHQLGREKTLTGELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLEEAISYYQQ 1040
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 285
I ++P+A N G +Q A C +++ D
Sbjct: 1041 AIESQPDYPSAFYNL---------------------GLVYEQLKETEKAIACYSHSVQLD 1079
Query: 286 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 331
++ +LA Y ++ + K A L+P+ + RY + V
Sbjct: 1080 STNVEVYKSLAQLYDRQENYAKAEKYYRCALLLQPHNLELRYNLGV 1125
Score = 38.1 bits (87), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 90/217 (41%), Gaps = 30/217 (13%)
Query: 46 LGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEIL 105
L EE +S + + P A + LGL+Y++L + KA++ Y + ++
Sbjct: 1024 LAAQQGQLEEAISYYQQAI----ESQPDYPSAFYNLGLVYEQLKETEKAIACYSHSVQL- 1078
Query: 106 LRCEADIARPELL-SLVQIHHAQ-----------CLLPESSGDNSLDKEL-----EPEEL 148
D E+ SL Q++ Q C L + L L E E+
Sbjct: 1079 -----DSTNVEVYKSLAQLYDRQENYAKAEKYYRCALLLQPHNLELRYNLGVVLYEQEKF 1133
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
++ +S ++ +Q+ + A+ + LG+ + L + S + +DP+ NLG+
Sbjct: 1134 DKAVSCFQKIIQAKPQDAIAYLHLGISYKQQKLLTKAKSCFEKAIELDPDYAMAYYNLGV 1193
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL 245
Y D +++ CF+ + D PA + + ALL
Sbjct: 1194 VYSCQPDEKKAVDCFRQSLRCD---PANKLAHTALLF 1227
>gi|118375735|ref|XP_001021051.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89302818|gb|EAS00806.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 443
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 94/224 (41%), Gaps = 27/224 (12%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
L ++ +E + L+E+++ + N LGL SG LQ ++++ L+ DPNN +
Sbjct: 61 LHLKQYKEAIQHLEEAVKLNKLDYGAQNNLGLAYASSGDLQKALNIFEDLVKKDPNNLEV 120
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLC---------------K 247
N +A ++ +++ DLI +Q + A Y L+ C +
Sbjct: 121 FFNKAVALIENKKFDEAILILMDLI--NQKYEKA---YFKLVDCFVSLNKREEAMKYLQQ 175
Query: 248 YGSVLAGAGANT---GEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGD 304
Y + +G T GE A V+ A EC A++ DPK + L YY
Sbjct: 176 YYQINSGDSQKTYLLGEKAI--DIQEVDYAVECFEKAVQLDPKHQNACLFLGMTYYNKKM 233
Query: 305 HRSSGKCLEKAAKLEPNCMSTRYAVAVSRI--KDAERSQEPTEQ 346
+ S K +++ P + + + + K+ E++ + EQ
Sbjct: 234 YEKSIHYYLKTSEINPKNFTCLNGLGIVYLEQKEYEKALQYFEQ 277
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 168 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
V+N LGL L + + +I L + ++ + NLG+AY SGD++++ F+DL+
Sbjct: 52 VYNNLGLACLHLKQYKEAIQHLEEAVKLNKLDYGAQNNLGLAYASSGDLQKALNIFEDLV 111
Query: 228 LKDQNHPAALINYAALLL 245
KD N+ N A L+
Sbjct: 112 KKDPNNLEVFFNKAVALI 129
>gi|302039657|ref|YP_003799979.1| hypothetical protein NIDE4395 [Candidatus Nitrospira defluvii]
gi|300607721|emb|CBK44054.1| protein of unknown function, TPR-like [Candidatus Nitrospira
defluvii]
Length = 345
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 108/263 (41%), Gaps = 40/263 (15%)
Query: 74 NAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPES 133
NA H + GL + GQ ++++SY++A ++ + A P L QIH
Sbjct: 89 NAQTHLVQGLFLAQSGQSEQSMASYKEAAKLAPQS----AYPHYF-LAQIHE-------- 135
Query: 134 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLL 193
+ LE + + +E+++ A LG+ + GRL+ +I ++
Sbjct: 136 ----------RADHLEMAIKEYREAVKLAPAFAPARTNLGVAYQEQGRLEMAIPQYREVI 185
Query: 194 AVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAA----------- 242
++PN+ NLG A + G E + + +++ + N + I++A
Sbjct: 186 KLNPNDALAHANLGCALAEQGKFEPALQAYKEAL--RLNPSDSEIHFALGGVYETKGRMD 243
Query: 243 LLLCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANA 298
L L +Y A A+T G L + S + A E A+KA+P+ A +
Sbjct: 244 LALREYREATQLNPEFASAHTALGWLLMEQSRASEAMESFSKAVKANPEEAQALYGIGRI 303
Query: 299 YYLTGDHRSSGKCLEKAAKLEPN 321
Y G S+ + KA + E +
Sbjct: 304 YAAKGKRESAAENFSKAIRFEKD 326
>gi|386001044|ref|YP_005919343.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
gi|357209100|gb|AET63720.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
Length = 351
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 56/146 (38%), Gaps = 21/146 (14%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
EE L + + D++ WN G +L + GRL+ +++ + LA+DP + D + G
Sbjct: 125 EEALESYNRAAEFDSKDPDAWNGRGTVLARLGRLEEALASTDTALAMDPEDADAWNSKGA 184
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
Q G E++ C+ I D P N G+ L Q
Sbjct: 185 ILLQLGRPEEALACYDRAIEIDPEDPDLWNN---------------------RGSALHQL 223
Query: 269 SAVNVAKECLLAALKADPKAAHIWAN 294
A++ A+ DP + W N
Sbjct: 224 GRYQEAQDSYSWAIALDPLHEYAWYN 249
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
LEE L+ ++ D A WN+ G ILL+ GR + +++ + +DP + D N G
Sbjct: 158 LEEALASTDTALAMDPEDADAWNSKGAILLQLGRPEEALACYDRAIEIDPEDPDLWNNRG 217
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
A Q G +++ + I D H A N L+
Sbjct: 218 SALHQLGRYQEAQDSYSWAIALDPLHEYAWYNRGLLV 254
>gi|327401465|ref|YP_004342304.1| hypothetical protein Arcve_1589 [Archaeoglobus veneficus SNP6]
gi|327316973|gb|AEA47589.1| Tetratricopeptide TPR_1 repeat-containing protein [Archaeoglobus
veneficus SNP6]
Length = 454
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 242 ALLLCKYGSVL--AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 299
A+ LC + + A A G+GA L + A EC ALK +PK + W N NA
Sbjct: 265 AMTLCNWALAVDPTYADAWNGKGAVLYKFGKYYEAIECFTKALKINPKFVNAWNNKGNAL 324
Query: 300 YLTGDHRSSGKCLEKAAKLEPNCM 323
G +R + KC KA +++P M
Sbjct: 325 CRLGKYRDAIKCYNKALEIDPEYM 348
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 44/99 (44%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
E E+ ++ ++ D A WN G +L K G+ +I + L ++P + N
Sbjct: 261 EYEKAMTLCNWALAVDPTYADAWNGKGAVLYKFGKYYEAIECFTKALKINPKFVNAWNNK 320
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL 245
G A + G + KC+ + D + A++N + + +
Sbjct: 321 GNALCRLGKYRDAIKCYNKALEIDPEYMEAIMNLSEIFI 359
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 29/62 (46%)
Query: 403 AGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVL 462
A G+ A L + A EC ALK +PK + W N NA G +R + KC K L
Sbjct: 282 AWNGKGAVLYKFGKYYEAIECFTKALKINPKFVNAWNNKGNALCRLGKYRDAIKCYNKAL 341
Query: 463 MV 464
+
Sbjct: 342 EI 343
>gi|328784392|ref|XP_395911.4| PREDICTED: tetratricopeptide repeat protein 37-like [Apis
mellifera]
Length = 1254
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 16/167 (9%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG-DMEQSAKCFQDLI 227
W LG+I + S+ + + D N C+ LG Y + G DME+S KC+Q +
Sbjct: 444 WLFLGIIYWEMAEYNYSLMAFLNGIKADRYNWKCLVYLGHYYREYGNDMERSRKCYQSAL 503
Query: 228 LKDQNHPAALI--NYAALLLCKYGSVLAGAGANTGEGA------------CLDQASAVNV 273
+ N A I + A LL + + T +G+ LDQ +A
Sbjct: 504 QINPNSEEAGIGLSTAYRLLKNQDANIKLLQVLTVQGSGPRWAWLQLGLQYLDQGNAEQA 563
Query: 274 AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
K ++ DP +H W +LA+AY++ G + S+ K ++ +L P
Sbjct: 564 IK-AFQHVIRVDPNDSHCWESLADAYFIRGAYTSALKSYQRVLELCP 609
>gi|427717067|ref|YP_007065061.1| hypothetical protein Cal7507_1771 [Calothrix sp. PCC 7507]
gi|427349503|gb|AFY32227.1| hypothetical protein Cal7507_1771 [Calothrix sp. PCC 7507]
Length = 1269
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 72/188 (38%), Gaps = 13/188 (6%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
EL+ ++ ++++ +N LG L G+++ +I+ LL ++PN NL
Sbjct: 598 ELKAAVASFTKAIRLQPDYIAAYNQLGNALQGLGQIEGAIAAYQKLLTINPNVAQAHCNL 657
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLA------------- 253
G + G +++ +Q I N A +N L + + A
Sbjct: 658 GSIWQMQGKTQEAIAAYQRAIQLQPNFAVAYLNLGRLYANQQSWLEAKQCLQQAVRLQPE 717
Query: 254 GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
A G L Q + A CL ALK P W +L + GD + C +
Sbjct: 718 SVAAYYNLGNVLGQIGQIEKAIACLHHALKHQPDFVDTWHSLGCLWMAQGDMDKAQTCFQ 777
Query: 314 KAAKLEPN 321
+ L+P+
Sbjct: 778 QVVTLQPD 785
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 78/163 (47%), Gaps = 23/163 (14%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A AH LG ++Q G+ +A+++Y++A I L+ +A L+L +++ Q
Sbjct: 648 PNVAQAHCNLGSIWQMQGKTQEAIAAYQRA--IQLQPNFAVA---YLNLGRLYANQ---- 698
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
LE ++ L+++++ + LG +L + G+++ +I+ L
Sbjct: 699 --------QSWLEAKQC------LQQAVRLQPESVAAYYNLGNVLGQIGQIEKAIACLHH 744
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP 234
L P+ D +LG + GDM+++ CFQ ++ ++P
Sbjct: 745 ALKHQPDFVDTWHSLGCLWMAQGDMDKAQTCFQQVVTLQPDYP 787
>gi|229577037|ref|NP_001153421.1| tetratricopeptide repeat domain 37 [Nasonia vitripennis]
Length = 1302
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 107/255 (41%), Gaps = 39/255 (15%)
Query: 109 EADIARPELLSLVQIHHAQCLLPESSGDNS------------LDKELEPEELEEILSKLK 156
++ I R L L++ A+ L+ D + L +E EE ++L +
Sbjct: 381 KSSILRAHLYVLLRDKRAKVLINNLKNDQNTKIEGTVLHAMDLLQERHLEEAADVLGSIL 440
Query: 157 ESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQ--SG 214
E+ ++ W TLG I + S+ + DPNN +C+ LG Y Q S
Sbjct: 441 ETSEA-------WLTLGKIHWEMADYGHSLMAFLKGIRADPNNWECLVYLG-RYHQEHSK 492
Query: 215 DMEQSAKCFQDLILKDQNHPAALINYAAL-LLCKYGS---VLAGAGANTGEGA------- 263
D ++S KC+Q + + N A I + + L K L N G G
Sbjct: 493 DYDRSKKCYQKALQINPNSEQAGIGLSLVHRLLKNNEENLKLLTQLTNQGRGPKWALLQL 552
Query: 264 ---CLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
LDQ ++ + A L A+KADP ++ W LA+AY G H S+ K E+A KL
Sbjct: 553 GLQYLDQGNS-SEAVAILRNAVKADPIDSNCWECLADAYLARGAHLSAIKSYERALKL-- 609
Query: 321 NCMSTRYAVAVSRIK 335
N S +S IK
Sbjct: 610 NSESIYSMTQLSNIK 624
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 139 LDKELEPEEL-EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAV-- 195
LD ++P E+ + L+ KE+++ D WN LG+I + + +++ S ++A+
Sbjct: 777 LDTSIDPNEIANKSLAAAKEAVKIDPSNWFHWNLLGVICMSNEIKNYALAQHSFVMAIET 836
Query: 196 DPNNCDCIGNLGIAYFQSGDMEQSAKCF 223
+PNN NLG Y D+ ++ K F
Sbjct: 837 EPNNAVSWTNLGCLYLLLEDLYRANKAF 864
>gi|340621977|ref|YP_004740429.1| hypothetical protein Ccan_12060 [Capnocytophaga canimorsus Cc5]
gi|339902243|gb|AEK23322.1| TPR repeat protein [Capnocytophaga canimorsus Cc5]
Length = 459
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 183 QSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAA 242
Q I+ L+ L P LG Y +++++ +CF I+ D A A
Sbjct: 183 QECIAFLNQFLNQSPYCEIAWYYLGKQYIHQENLQEALRCFDFAIISDDTFTGAYFEKAK 242
Query: 243 LL---------LCKYGSVLAGAGAN----TGEGACLDQASAVNVAKECLLAALKADPKAA 289
+L + Y L A+ G C ++ + A++ A++ DP+ +
Sbjct: 243 VLEMFGEYQKAIENYKITLTLDDASPLVFLHIGKCYEKMNDDESAEKYYFKAVQEDPQLS 302
Query: 290 HIWANLANAYYLTGDHRSSGKCLEKAAKLEPN--CMSTRYA---VAVSRIKDAERS 340
W NL+ YYL G+ S K L K +LE RYA +AV+ +K AE++
Sbjct: 303 KSWMNLSEFYYLRGEFAKSLKYLYKVLQLEEENPFYWKRYAEINLAVNDLKKAEQA 358
>gi|345302037|ref|YP_004823939.1| hypothetical protein Rhom172_0153 [Rhodothermus marinus
SG0.5JP17-172]
gi|345111270|gb|AEN72102.1| Tetratricopeptide TPR_2 repeat-containing protein [Rhodothermus
marinus SG0.5JP17-172]
Length = 465
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 71/185 (38%), Gaps = 21/185 (11%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
EE L + ++Q D ++ LG+ L + RL+ ++ L ++P++ + LG
Sbjct: 122 FEEALQTYERALQIDPLNDEIYYNLGITLERMDRLEEAVQALEEAARLNPDHPEVWYELG 181
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 267
Y + GD E+S C+ + D A N G L++
Sbjct: 182 FCYDRLGDDERSLACYDRHLELDPYSADAWYN---------------------RGIVLNR 220
Query: 268 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 327
A E AL W N NA GD R + + EK ++E +T Y
Sbjct: 221 MGRFREAVESYDYALAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKVLEIEGGDPATYY 280
Query: 328 AVAVS 332
+A++
Sbjct: 281 NIALA 285
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 82/214 (38%), Gaps = 20/214 (9%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
+ LEE + L+E+ + + VW LG + G + S++ L +DP + D N
Sbjct: 154 DRLEEAVQALEEAARLNPDHPEVWYELGFCYDRLGDDERSLACYDRHLELDPYSADAWYN 213
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQ--------NHPAALINYAALL--LCKYGSVLAGA 255
GI + G ++ + + D L Q N AL N L + Y VL
Sbjct: 214 RGIVLNRMGRFREAVESY-DYALAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKVLEIE 272
Query: 256 GANTGE----GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 311
G + ++ A + AL+ DP A W L Y + C
Sbjct: 273 GGDPATYYNIALAYEELQEYETAIQYFQLALEEDPAYAEAWYGLGCCYDALERFEEAIAC 332
Query: 312 LEKAAKLEPNCMSTRYAVA-----VSRIKDAERS 340
+E+A L+P YA A R++DA +S
Sbjct: 333 MERAVTLQPETSEFWYAKADCEYNARRLQDALQS 366
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 68/351 (19%), Positives = 125/351 (35%), Gaps = 39/351 (11%)
Query: 135 GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLA 194
G + D L+P +E++++ + S + + + GR + ++ + LLA
Sbjct: 7 GFDDADDALDPSHIEQLVAAYEAQGSSAYFDSDTLEEIATYYYERGRFEDALGAIDRLLA 66
Query: 195 VDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL---------L 245
+ P D GI G E++ + ++ + + L+N L L
Sbjct: 67 LHPTASDAWMRRGILLSHLGRHEEALQAYERALSLNPTDTETLVNLGITLDNLGRFEEAL 126
Query: 246 CKYGSVLAGAGAN----TGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYL 301
Y L N G L++ + A + L A + +P +W L Y
Sbjct: 127 QTYERALQIDPLNDEIYYNLGITLERMDRLEEAVQALEEAARLNPDHPEVWYELGFCYDR 186
Query: 302 TGDHRSSGKCLEKAAKLEPNCMSTRY--AVAVSRIKDAERSQEPTEQLSWAGNEMASILR 359
GD S C ++ +L+P Y + ++R+ R +E E +A
Sbjct: 187 LGDDERSLACYDRHLELDPYSADAWYNRGIVLNRMG---RFREAVESYDYAL-------- 235
Query: 360 EGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNV 419
+Q + AW ++ A E+ E K+ E G + + + A A
Sbjct: 236 ---AIQEDFGSAWYNRGNALTNLGDLRGAIESYE----KVLEIEGGDPATYYNIALAYEE 288
Query: 420 AKECLLA------ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
+E A AL+ DP A W L Y + C+E+ + +
Sbjct: 289 LQEYETAIQYFQLALEEDPAYAEAWYGLGCCYDALERFEEAIACMERAVTL 339
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 99/263 (37%), Gaps = 36/263 (13%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P N ++ LG+ +R+ + +AV + E+A R D PE + +
Sbjct: 137 PLNDEIYYNLGITLERMDRLEEAVQALEEAA----RLNPD--HPE------VWYELGFCY 184
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+ GD+ E L+ ++ D A W G++L + GR + ++
Sbjct: 185 DRLGDD-----------ERSLACYDRHLELDPYSADAWYNRGIVLNRMGRFREAVESYDY 233
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYG 249
LA+ + N G A GD+ + + ++ ++ + PA N A L +Y
Sbjct: 234 ALAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKVLEIEGGDPATYYNIALAYEELQEYE 293
Query: 250 SVL-----------AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANA 298
+ + A A A G G C D A C+ A+ P+ + W A+
Sbjct: 294 TAIQYFQLALEEDPAYAEAWYGLGCCYDALERFEEAIACMERAVTLQPETSEFWYAKADC 353
Query: 299 YYLTGDHRSSGKCLEKAAKLEPN 321
Y + + + + +L+P
Sbjct: 354 EYNARRLQDALQSYRRVIELDPQ 376
>gi|255571800|ref|XP_002526843.1| tetratricopeptide repeat protein, tpr, putative [Ricinus communis]
gi|223533847|gb|EEF35578.1| tetratricopeptide repeat protein, tpr, putative [Ricinus communis]
Length = 258
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 67/143 (46%)
Query: 94 AVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILS 153
V ++ ++L+R E D++ EL V+ A G L ++ P + +L
Sbjct: 91 GVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATELFELGAVMLRRKFYPAANKFLLQ 150
Query: 154 KLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQS 213
+++ D A V+N LG+ ++ G+L I+ + + + P NLG AY +
Sbjct: 151 AIEKWDGDDQDLAQVYNALGVSYVRDGKLDKGITQFETAVKLQPGYVTAWNNLGDAYEKK 210
Query: 214 GDMEQSAKCFQDLILKDQNHPAA 236
+ + + K F++++L D N+ A
Sbjct: 211 KEYKSALKAFEEVLLFDPNNKVA 233
>gi|218190772|gb|EEC73199.1| hypothetical protein OsI_07263 [Oryza sativa Indica Group]
Length = 1004
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 16/203 (7%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E + + ++Q+ A+ + L I + G+L +I + + DP + N+G
Sbjct: 299 QEAIISYQRAVQARPDYAMAYGNLATIYYEQGQLDIAIRCYNQAIICDPQFVEAYNNMGN 358
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGA-------GANTGE 261
A +G +E++ C++ + NHP AL N + + ++ + A A +G
Sbjct: 359 ALKDAGRVEEAINCYRSCLALQANHPQALTNLGNIYM-EWNLISAAASFYKAAISVTSGL 417
Query: 262 GACLDQASAV-----NVAK--ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 314
+ L+ + + N A C L+ DP AA N N + G + + +
Sbjct: 418 SSPLNNLAVIYKQQGNYADAITCYTEVLRVDPTAADALVNRGNTFKEIGRVNEAIQDYIQ 477
Query: 315 AAKLEPNCMSTRYAVAVSRIKDA 337
AA + P M+ +A S KD+
Sbjct: 478 AATIRPT-MAEAHANLASAYKDS 499
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 67/174 (38%), Gaps = 37/174 (21%)
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
LG I + I+ LA+DPN +C GN+ A+ + GD++ + + + I
Sbjct: 118 LGAIYYQIRNYDMCIAKNEEALAIDPNFAECYGNMANAWKEKGDVDLAIRYYLTAIQLRP 177
Query: 232 NHPAALINYAALLLCKYGSVLAGAGANTGE----GACLDQASAVNV-------------- 273
N C S LA A G C QA A+N
Sbjct: 178 N------------FCDAWSNLASAYTRKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMK 225
Query: 274 -------AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
A C + AL+ DP+ A W+NLA + GD + ++A KL+P
Sbjct: 226 AQGFIQEAYNCYIEALRIDPQFAIAWSNLAGLFMEAGDLDKALLYYKEAVKLKP 279
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 112/268 (41%), Gaps = 46/268 (17%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL----SLVQIHHAQ 127
P A A+ G +Y+ +G +A+ SY++A + ARP+ +L I++ Q
Sbjct: 279 PSFADAYLNQGNVYKTMGMSQEAIISYQRAVQ---------ARPDYAMAYGNLATIYYEQ 329
Query: 128 CLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSIS 187
+L+ + +++ D + +N +G L +GR++ +I+
Sbjct: 330 ------------------GQLDIAIRCYNQAIICDPQFVEAYNNMGNALKDAGRVEEAIN 371
Query: 188 VLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALI---- 238
S LA+ N+ + NLG Y + + +A ++ I L + A+I
Sbjct: 372 CYRSCLALQANHPQALTNLGNIYMEWNLISAAASFYKAAISVTSGLSSPLNNLAVIYKQQ 431
Query: 239 -NYAALLLCKYGSVL----AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWA 293
NYA + C Y VL A A G + VN A + + A P A A
Sbjct: 432 GNYADAITC-YTEVLRVDPTAADALVNRGNTFKEIGRVNEAIQDYIQAATIRPTMAEAHA 490
Query: 294 NLANAYYLTGDHRSSGKCLEKAAKLEPN 321
NLA+AY +G ++ ++A +L P+
Sbjct: 491 NLASAYKDSGHVETAIVSYKQALRLRPD 518
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 114/299 (38%), Gaps = 41/299 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
W+ L + GRL + LA++P D NLG G ++++ C+ + +
Sbjct: 183 WSNLASAYTRKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYNCYIEALR 242
Query: 229 KDQNHPAALINYAALLL---------------CKYGSVLAGAGANTGEGACLDQASAVNV 273
D A N A L + K A A N G + + +
Sbjct: 243 IDPQFAIAWSNLAGLFMEAGDLDKALLYYKEAVKLKPSFADAYLNQG-----NVYKTMGM 297
Query: 274 AKECLLA---ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
++E +++ A++A P A + NLA YY G + +C +A +P + Y
Sbjct: 298 SQEAIISYQRAVQARPDYAMAYGNLATIYYEQGQLDIAIRCYNQAIICDPQFVEA-YNNM 356
Query: 331 VSRIKDAERSQEPTE----QLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVA 386
+ +KDA R +E L+ N ++ G+ + +E + A A+ K V
Sbjct: 357 GNALKDAGRVEEAINCYRSCLALQANHPQALTNLGN-IYMEWNLISAA-ASFYKAAISVT 414
Query: 387 AAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 445
+ + N L+ + + G + A A+ C L+ DP AA N N +
Sbjct: 415 SGLSSPLNNLAVIYKQQG-------NYADAIT----CYTEVLRVDPTAADALVNRGNTF 462
>gi|73670401|ref|YP_306416.1| hypothetical protein Mbar_A2941 [Methanosarcina barkeri str.
Fusaro]
gi|72397563|gb|AAZ71836.1| hypothetical protein Mbar_A2941 [Methanosarcina barkeri str.
Fusaro]
Length = 560
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 29/206 (14%)
Query: 117 LLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLIL 176
L+ L I+HA +S N ++ +E E+ L + +S+ D WN G +L
Sbjct: 350 LVGLYTIYHA------NSPYNEVNDLMELGRDEDALKVINKSIDIDPNNDYAWNIKGNVL 403
Query: 177 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 236
GR ++ +A++PN D + G A ++ G +++ L+ N A
Sbjct: 404 YHLGRYDEALQAYDKAIAINPNYVDAWNSKGNALYRLGKYDEA--------LQASNKAIA 455
Query: 237 L-INYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 295
+ NYA K G+ L G G D+A A+N P A+ W
Sbjct: 456 INPNYADAWNGK-GNALYGLGRYDEALQAYDKAIAIN-------------PNYAYAWNGK 501
Query: 296 ANAYYLTGDHRSSGKCLEKAAKLEPN 321
NA Y G + + + +KA + PN
Sbjct: 502 GNALYRLGRYDEALQAYDKAIAINPN 527
>gi|47848089|dbj|BAD21873.1| putative O-linked N-acetyl glucosamine transferase [Oryza sativa
Japonica Group]
gi|47848095|dbj|BAD21878.1| putative O-linked N-acetyl glucosamine transferase [Oryza sativa
Japonica Group]
Length = 953
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 16/203 (7%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E + + ++Q+ A+ + L I + G+L +I + + DP + N+G
Sbjct: 299 QEAIISYQRAVQARPDYAMAYGNLATIYYEQGQLDIAIRCYNQAIICDPQFVEAYNNMGN 358
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGA-------GANTGE 261
A +G +E++ C++ + NHP AL N + + ++ + A A +G
Sbjct: 359 ALKDAGRVEEAINCYRSCLALQANHPQALTNLGNIYM-EWNLISAAASFYKAAISVTSGL 417
Query: 262 GACLDQASAV-----NVAK--ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 314
+ L+ + + N A C L+ DP AA N N + G + + +
Sbjct: 418 SSPLNNLAVIYKQQGNYADAITCYTEVLRVDPTAADALVNRGNTFKEIGRVNEAIQDYIQ 477
Query: 315 AAKLEPNCMSTRYAVAVSRIKDA 337
AA + P M+ +A S KD+
Sbjct: 478 AATIRPT-MAEAHANLASAYKDS 499
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 15/163 (9%)
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
LG I + I+ LA+DPN +C GN+ A+ + GD++ + + + I
Sbjct: 118 LGAIYYQIRNYDMCIAKNEEALAIDPNFAECYGNMANAWKEKGDVDLAIRYYLTAIQLRP 177
Query: 232 NHPAALINYAALLLCKYGSVLAGA--------------GANTGEGACLDQASAVNVAKEC 277
N A N A+ K G + A A++ G + + A C
Sbjct: 178 NFCDAWSNLASAYTWK-GRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYNC 236
Query: 278 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
+ AL+ DP+ A W+NLA + GD + ++A KL+P
Sbjct: 237 YIEALRIDPQFAIAWSNLAGLFMEAGDLDKALLYYKEAVKLKP 279
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 112/268 (41%), Gaps = 46/268 (17%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL----SLVQIHHAQ 127
P A A+ G +Y+ +G +A+ SY++A + ARP+ +L I++ Q
Sbjct: 279 PSFADAYLNQGNVYKTMGMSQEAIISYQRAVQ---------ARPDYAMAYGNLATIYYEQ 329
Query: 128 CLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSIS 187
+L+ + +++ D + +N +G L +GR++ +I+
Sbjct: 330 ------------------GQLDIAIRCYNQAIICDPQFVEAYNNMGNALKDAGRVEEAIN 371
Query: 188 VLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALI---- 238
S LA+ N+ + NLG Y + + +A ++ I L + A+I
Sbjct: 372 CYRSCLALQANHPQALTNLGNIYMEWNLISAAASFYKAAISVTSGLSSPLNNLAVIYKQQ 431
Query: 239 -NYAALLLCKYGSVL----AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWA 293
NYA + C Y VL A A G + VN A + + A P A A
Sbjct: 432 GNYADAITC-YTEVLRVDPTAADALVNRGNTFKEIGRVNEAIQDYIQAATIRPTMAEAHA 490
Query: 294 NLANAYYLTGDHRSSGKCLEKAAKLEPN 321
NLA+AY +G ++ ++A +L P+
Sbjct: 491 NLASAYKDSGHVETAIVSYKQALRLRPD 518
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 75/192 (39%), Gaps = 24/192 (12%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
W+ L GRL + LA++P D NLG G ++++ C+ + +
Sbjct: 183 WSNLASAYTWKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYNCYIEALR 242
Query: 229 KDQNHPAALINYAALLL---------------CKYGSVLAGAGANTGEGACLDQASAVNV 273
D A N A L + K A A N G + + +
Sbjct: 243 IDPQFAIAWSNLAGLFMEAGDLDKALLYYKEAVKLKPSFADAYLNQG-----NVYKTMGM 297
Query: 274 AKECLLA---ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
++E +++ A++A P A + NLA YY G + +C +A +P + Y
Sbjct: 298 SQEAIISYQRAVQARPDYAMAYGNLATIYYEQGQLDIAIRCYNQAIICDPQFVEA-YNNM 356
Query: 331 VSRIKDAERSQE 342
+ +KDA R +E
Sbjct: 357 GNALKDAGRVEE 368
>gi|383454518|ref|YP_005368507.1| hypothetical protein COCOR_02522 [Corallococcus coralloides DSM
2259]
gi|380728694|gb|AFE04696.1| hypothetical protein COCOR_02522 [Corallococcus coralloides DSM
2259]
Length = 271
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 14/165 (8%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P +AHAH L +Y Q +A+ Y A + L E+ A L + H ++ +
Sbjct: 42 PTSAHAHDNLATVYAEKKQFREALGEYLTA--LKLEPESATAHYNLACFLSTHASEMAVE 99
Query: 132 ESSGDNSLDKELEPEEL------------EEILSKLKESMQSDTRQAVVWNTLGLILLKS 179
E LD E L EE + +L+ +++ D + A + L +++
Sbjct: 100 EYKEAIELDPEYPDAHLNLGLTYADQGRVEEAMRELQSAIELDPQDAFPRHELAALMMDE 159
Query: 180 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 224
G +SSI+ L ++ ++P+N + +LGI Y Q G ++ + ++
Sbjct: 160 GDYRSSITQLKEVVRLEPDNFEAQLDLGICYAQKGFYAEAERAYE 204
>gi|386827305|ref|ZP_10114412.1| tetratricopeptide repeat protein,tetratricopeptide repeat
protein,sulfotransferase family protein [Beggiatoa alba
B18LD]
gi|386428189|gb|EIJ42017.1| tetratricopeptide repeat protein,tetratricopeptide repeat
protein,sulfotransferase family protein [Beggiatoa alba
B18LD]
Length = 561
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 85/194 (43%), Gaps = 31/194 (15%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E + LK+++ + + +A+ N LG +L + G + +I+ + L PN+ + + NL
Sbjct: 62 EAIKLLKKAIANKSDEAIYHNNLGNLLNEQGNIAQAITAYRAALRHKPNHLNALYNLACL 121
Query: 210 YFQSGDMEQSAKCFQDLI-LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
+ GD + + +C + L+ L Q+ A A G+CL +
Sbjct: 122 LEKQGDYDGATQCLRHLVKLAPQD----------------------AQAWNQLGSCLLED 159
Query: 269 SAVNVAKE---CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
N + E C A++ P A W NL AY +G+ +++ C +A + P
Sbjct: 160 WRYNHSAEAIACYQKAVQYQPNYADAWNNLGIAYMDSGNSQTAIDCYRQALRCNP----- 214
Query: 326 RYAVAVSRIKDAER 339
+YA A + A++
Sbjct: 215 QYARAYENLARAKK 228
>gi|409992949|ref|ZP_11276112.1| hypothetical protein APPUASWS_17665 [Arthrospira platensis str.
Paraca]
gi|291567436|dbj|BAI89708.1| TPR domain protein [Arthrospira platensis NIES-39]
gi|409936195|gb|EKN77696.1| hypothetical protein APPUASWS_17665 [Arthrospira platensis str.
Paraca]
Length = 883
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 50/102 (49%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
LE + +E ++K ++ +Q + + TLGL L KS RL+++ + + +DPN
Sbjct: 22 LEEGKFDEAIAKCQQVIQQQPEWVMAYKTLGLALQKSNRLEAAENAYKKAINLDPNLVAA 81
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
GNLG Y Q G E++ + I D N N A +L
Sbjct: 82 YGNLGSLYAQQGRWEEAETTLKQAINIDPNFRGVYRNLARVL 123
>gi|297569640|ref|YP_003690984.1| TPR repeat-containing protein [Desulfurivibrio alkaliphilus AHT2]
gi|296925555|gb|ADH86365.1| TPR repeat-containing protein [Desulfurivibrio alkaliphilus AHT2]
Length = 212
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 21/176 (11%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E+L +I+++L++ + L L+ K+GR+ +I L L +D + + N
Sbjct: 9 EQLNKIIAELEQKCADKPENVPAHHHLALVYRKAGRIDDAIRELEKCLELDEQSVEAYIN 68
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
LG YF+ G+++Q A +N A+ + S A+ G
Sbjct: 69 LGAIYFEQGNLDQ----------------ALAVNLKAVKVLPEMS-----RAHNNIGLIK 107
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
Q A A++ DPK + W N+A+ + GD + + ++A KL P+
Sbjct: 108 QQQGDAAAAIAAYEEAVRHDPKLTNAWVNMASCRIMAGDFEQALQAAKEAIKLAPD 163
>gi|449126796|ref|ZP_21763074.1| hypothetical protein HMPREF9733_00477 [Treponema denticola SP33]
gi|448945737|gb|EMB26606.1| hypothetical protein HMPREF9733_00477 [Treponema denticola SP33]
Length = 939
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 64/163 (39%), Gaps = 21/163 (12%)
Query: 168 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
N +G+I + SI +L A+D N + NLG Y Q+GD + + +CF D++
Sbjct: 79 TLNNMGVIYRRLNMFNESIVILEKTKAIDNKNETTLYNLGNTYKQNGDYKHAIQCFTDVL 138
Query: 228 LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPK 287
P + Y L GSV C D A+ K LK DP
Sbjct: 139 ---DIKPDDALAYNHL-----GSVYF---------LCKDYPKALETYK----IGLKVDPN 177
Query: 288 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
+ NLA Y ++ + + A K +PN A+A
Sbjct: 178 HPFLNFNLAELYKEKKLYKEAINSYQTAIKTKPNWYEALAAIA 220
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/180 (18%), Positives = 70/180 (38%), Gaps = 21/180 (11%)
Query: 151 ILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAY 210
+LS+ K+ + + + LG + ++SG ++ + + L +++PNN D + N+G+ Y
Sbjct: 28 LLSQFKKQKNTPDEYYQLKSLLGKLYIRSGDMKKGLEIYKELNSLNPNNLDTLNNMGVIY 87
Query: 211 FQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASA 270
+ +S + D + L N G Q
Sbjct: 88 RRLNMFNESIVILEKTKAIDNKNETTLYNL---------------------GNTYKQNGD 126
Query: 271 VNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
A +C L P A + +L + Y+L D+ + + + K++PN + +A
Sbjct: 127 YKHAIQCFTDVLDIKPDDALAYNHLGSVYFLCKDYPKALETYKIGLKVDPNHPFLNFNLA 186
>gi|118369961|ref|XP_001018183.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89299950|gb|EAR97938.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 3418
Score = 49.7 bits (117), Expect = 0.003, Method: Composition-based stats.
Identities = 73/296 (24%), Positives = 120/296 (40%), Gaps = 59/296 (19%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL---SLVQIHHAQC 128
PK + + +LG Y++ Q L+A+ Y+K +I + E+L +L+QI +
Sbjct: 2888 PKFPNINGILGEAYEQDQQYLEALIHYQKQTQI------NPENTEILFKMALIQISYDNF 2941
Query: 129 LLPESSGDNSLDK--ELEPEE----------------LEEILSKLKESMQSDTRQAVVWN 170
+ +DK EL+P++ L+E + +S+
Sbjct: 2942 ----NQAKQLIDKLIELKPQDYLVYSAQAYLYKRQGNLQEAIKSFDQSLSIQPTNTFTLF 2997
Query: 171 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 230
L L + G ++ + + + PN+ + NLGI Y Q G E++ + F I D
Sbjct: 2998 NLALCHGELGNIKQEKKMYKEIQKISPNDRKMLNNLGIIYRQKGKYEKAIQLFSQCIKLD 3057
Query: 231 QNHPAALINYAALLLCKYGSV-LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAA 289
Q N L LC Y GA +G LD+ +NV ECLL
Sbjct: 3058 QYFCDYFTN---LGLCYYAKGDYDGAINYFQKGYTLDR---INV--ECLL---------- 3099
Query: 290 HIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV-----SRIKDAERS 340
NLA+A G+ + + K L+K K+ PN + Y + + I DA+ S
Sbjct: 3100 ----NLASALKAKGEPQQAIKYLQKIIKINPNYTAAYYNLGIIQKQNGNISDAQTS 3151
Score = 48.1 bits (113), Expect = 0.008, Method: Composition-based stats.
Identities = 42/186 (22%), Positives = 80/186 (43%), Gaps = 13/186 (6%)
Query: 170 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 229
N LG+I + G+ + +I + S + +D CD NLG+ Y+ GD + + FQ
Sbjct: 3031 NNLGIIYRQKGKYEKAIQLFSQCIKLDQYFCDYFTNLGLCYYAKGDYDGAINYFQKGYTL 3090
Query: 230 DQNHPAALINYAALL--------LCKYGSVLAGAGANTGE-----GACLDQASAVNVAKE 276
D+ + L+N A+ L KY + N G Q ++ A+
Sbjct: 3091 DRINVECLLNLASALKAKGEPQQAIKYLQKIIKINPNYTAAYYNLGIIQKQNGNISDAQT 3150
Query: 277 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKD 336
+++ DP + LA Y D+ +S K L++A +++ N + +A+ +
Sbjct: 3151 SFKLSIEKDPYHINSVIQLAIIYREQNDYDNSKKLLKQALEIDSNNELANFNIALLYRQK 3210
Query: 337 AERSQE 342
+ ++E
Sbjct: 3211 CKHAKE 3216
Score = 38.1 bits (87), Expect = 8.7, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 40/100 (40%)
Query: 139 LDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPN 198
+ K L EL + LKE ++ + + K G + IS ++ + P+
Sbjct: 711 MSKSLSKAELVQETQNLKEHLEKQPNDIEALKVIAKLYQKRGMIDQEISHYKQIIELSPD 770
Query: 199 NCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALI 238
+ D LG +Y +++ CF KD H ++I
Sbjct: 771 DADVYFQLGKSYLGKSKEDEAVNCFNICFEKDNKHIDSII 810
>gi|220922451|ref|YP_002497753.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
gi|219947058|gb|ACL57450.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
Length = 1022
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 102/279 (36%), Gaps = 37/279 (13%)
Query: 82 GLMYQRLGQPLKAVSSYEKA-------------EEILLRCEADIARPELLSLVQIHHAQC 128
G +Q G+ +A++ Y +A R + + R ++ + A
Sbjct: 33 GYSFQNKGEYDRAIADYNQALRLDPKLTAAYVNRGFTFRSKGEYDR----AIADYNQALR 88
Query: 129 LLPES--SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSI 186
L P S + +N D + E ++ ++Q D + +V+N G G +I
Sbjct: 89 LDPRSVIAYNNRGDAFYHKGDYERAIADYNRALQLDPKHPIVYNNRGFAFHGKGEYDRAI 148
Query: 187 SVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLC 246
+ + L +DPN N G A+ G+ +++ + + D + A N +
Sbjct: 149 ADYNQALQLDPNYTFAYNNRGFAFQGKGEYDRAIADYSQALRLDPKYAIAYTNRGDVFRS 208
Query: 247 K--YGSVLAGAG-----------ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWA 293
K Y +A A G + A AL+ +PK
Sbjct: 209 KGEYNRAIADYNQALQFDPKPIIAYNNRGLAFQNMGEYDRAISDYTEALRLEPKYVIAVV 268
Query: 294 NLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 332
N A+A+ + G++ + ++A L PN YA+A +
Sbjct: 269 NRADAFRIKGEYDRAIVDYDQALHLNPN-----YAIAYN 302
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 74/195 (37%), Gaps = 26/195 (13%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
E + ++ ++++ D + + G G +I+ + L +DP + N
Sbjct: 41 EYDRAIADYNQALRLDPKLTAAYVNRGFTFRSKGEYDRAIADYNQALRLDPRSVIAYNNR 100
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G A++ GD E++ + + D HP ++ G G G A +
Sbjct: 101 GDAFYHKGDYERAIADYNRALQLDPKHP--------IVYNNRGFAFHGKGEYDRAIADYN 152
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
Q AL+ DP + N A+ G++ + +A +L+P +
Sbjct: 153 Q-------------ALQLDPNYTFAYNNRGFAFQGKGEYDRAIADYSQALRLDP-----K 194
Query: 327 YAVAVSRIKDAERSQ 341
YA+A + D RS+
Sbjct: 195 YAIAYTNRGDVFRSK 209
>gi|220922062|ref|YP_002497363.1| hypothetical protein Mnod_2075 [Methylobacterium nodulans ORS 2060]
gi|219946668|gb|ACL57060.1| TPR repeat-containing protein [Methylobacterium nodulans ORS 2060]
Length = 292
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
++ L + +Q + A +NT G ++G +I+ + + +DPN+ N +AY
Sbjct: 56 IASLSDVIQRNPNDAAAYNTRGAAYARAGSYNEAIADFTKAIQLDPNSASAYSNRALAYR 115
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAAL 243
QSG + + + F I D N+ AA I A L
Sbjct: 116 QSGRNDSALQDFTRAINADPNYSAAYIGRANL 147
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 78/197 (39%), Gaps = 31/197 (15%)
Query: 24 RISSKMDSALE---FGVDADGDQSGLGTSSSSREEKVSSLK---TGLVHVARKMPKNAHA 77
R S + DSAL+ ++AD + S ++ + + + + + L R P++A A
Sbjct: 115 RQSGRNDSALQDFTRAINADPNYSAAYIGRANLQRALGNYEAAYSDLSQAIRLTPESAEA 174
Query: 78 HFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDN 137
+ GL+ Q GQ A+ ++ A I R ++ Q L+ N
Sbjct: 175 YHARGLVRQAQGQHRAAIGDFDAA----------IDRNPFVNAPYAARGQSLI----ATN 220
Query: 138 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 197
DK +E ++ + + A W GL KSGR Q ++ A+DP
Sbjct: 221 QFDKAIE---------DYNAALNVNNKDADSWAYRGLAYEKSGRRQEAMESYQRASAIDP 271
Query: 198 NNCDCIGNLGIAYFQSG 214
NN + G+ Q G
Sbjct: 272 NN--AVARQGLGRVQGG 286
>gi|440752107|ref|ZP_20931310.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
gi|440176600|gb|ELP55873.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
Length = 1254
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 115/303 (37%), Gaps = 46/303 (15%)
Query: 56 KVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARP 115
++ S K + + P A ++ LG + + GQ +A+S Y++A E ++P
Sbjct: 996 ELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLEEAISYYQQAIE---------SQP 1046
Query: 116 ELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLI 175
+ P + + L E + +E E+ ++ S+Q D+ V+ +L +
Sbjct: 1047 DY-------------PSAFYNLGLVYE-QLKETEKAIACYSHSVQLDSTNVEVYKSLAQL 1092
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
+ + L + P+N + NLG+ ++ +++ CFQ +I Q P
Sbjct: 1093 YDRQENYAKAEKYYRCALLLQPHNLELRYNLGVVLYEQEKFDKAVSCFQKII---QAKPQ 1149
Query: 236 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 295
I Y L G Q + AK C A++ DP A + NL
Sbjct: 1150 DAIAYLHL------------------GISYKQQKLLTKAKSCFEKAIELDPDYAMAYYNL 1191
Query: 296 ANAYYLTGDHRSSGKCLEKAAKLEP--NCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNE 353
Y D + + C ++ + +P T A+S IK + W N+
Sbjct: 1192 GVVYSCQPDEKKAVDCFRQSLRCDPANKLAHTALLFALSGIKQVSSEEIYDASSRWYRNK 1251
Query: 354 MAS 356
+ +
Sbjct: 1252 IQT 1254
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 63/166 (37%), Gaps = 21/166 (12%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
A ++ LG +G L+S+ + + VDP NLG Q G +E++ +Q
Sbjct: 981 AAYYHQLGREKTLTGELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLEEAISYYQQ 1040
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 285
I ++P+A N G +Q A C +++ D
Sbjct: 1041 AIESQPDYPSAFYNL---------------------GLVYEQLKETEKAIACYSHSVQLD 1079
Query: 286 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 331
++ +LA Y ++ + K A L+P+ + RY + V
Sbjct: 1080 STNVEVYKSLAQLYDRQENYAKAEKYYRCALLLQPHNLELRYNLGV 1125
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 90/217 (41%), Gaps = 30/217 (13%)
Query: 46 LGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEIL 105
L EE +S + + P A + LGL+Y++L + KA++ Y + ++
Sbjct: 1024 LAAQQGQLEEAISYYQQAI----ESQPDYPSAFYNLGLVYEQLKETEKAIACYSHSVQL- 1078
Query: 106 LRCEADIARPELL-SLVQIHHAQ-----------CLLPESSGDNSLDKEL-----EPEEL 148
D E+ SL Q++ Q C L + L L E E+
Sbjct: 1079 -----DSTNVEVYKSLAQLYDRQENYAKAEKYYRCALLLQPHNLELRYNLGVVLYEQEKF 1133
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
++ +S ++ +Q+ + A+ + LG+ + L + S + +DP+ NLG+
Sbjct: 1134 DKAVSCFQKIIQAKPQDAIAYLHLGISYKQQKLLTKAKSCFEKAIELDPDYAMAYYNLGV 1193
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL 245
Y D +++ CF+ + D PA + + ALL
Sbjct: 1194 VYSCQPDEKKAVDCFRQSLRCD---PANKLAHTALLF 1227
>gi|394988448|ref|ZP_10381283.1| hypothetical protein SCD_00848 [Sulfuricella denitrificans skB26]
gi|393791827|dbj|GAB70922.1| hypothetical protein SCD_00848 [Sulfuricella denitrificans skB26]
Length = 735
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 17/168 (10%)
Query: 171 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 230
LG++L++ GRL + + L L + PN+ D NLGIA + + ++ CFQ +
Sbjct: 89 NLGVVLVEQGRLSEAEANLRRALEIKPNHADAHNNLGIALMKQERLSEAEPCFQQALKIK 148
Query: 231 QNHPAALINYAALLLCKYGSVLAGAGANTGE---------------GACLDQASAVNVAK 275
++ AL N +LL + +LA A + E G CL Q + ++
Sbjct: 149 PDYHEALNNLGSLLTEQ--GLLAEAEISCVEALKIKPDYVPALSNLGVCLQQQGRLAESE 206
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
C AL+ P +A L G + L +A +++P+ +
Sbjct: 207 ACFRRALEIKPDSAEALCGLGITLNDQGRFPEAEANLRRALEIKPDYV 254
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 170 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 229
+ LG+IL K GR+ +I+ + L +DP+N D + N G+A G +E+S + +
Sbjct: 258 SNLGMILEKQGRIDEAIASYNRALELDPDNPDILNNFGLALQDQGRLEESIPLMRHALKS 317
Query: 230 DQNHPAALIN 239
H AA N
Sbjct: 318 KPGHLAAQNN 327
>gi|94967946|ref|YP_589994.1| hypothetical protein Acid345_0917 [Candidatus Koribacter versatilis
Ellin345]
gi|94549996|gb|ABF39920.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
Ellin345]
Length = 566
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 75/182 (41%), Gaps = 23/182 (12%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
L K++ Q + + LGL + G + ++IS +A P N D +LG+A+
Sbjct: 238 LQNYKDAAQRSSEFPGLQERLGLTAQRVGEMPTAISAFQKAIAQSPQNPDLHNDLGLAFM 297
Query: 212 QSGDMEQSAKCF-QDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASA 270
Q+GD E + + F Q L LK ++ + Y L GA Q S
Sbjct: 298 QAGDGEGAIREFNQALNLKPED-----VGYLGNL-----------------GAAYLQLSE 335
Query: 271 VNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
+ A + AL+ P A + +LA L D + L +A +L+P Y +
Sbjct: 336 FDNAVDNFRKALQIAPANASLHHDLALTLKLKDDLAGAAAELREAIRLDPKLYDAHYTLG 395
Query: 331 VS 332
V+
Sbjct: 396 VT 397
>gi|380018362|ref|XP_003693099.1| PREDICTED: LOW QUALITY PROTEIN: tetratricopeptide repeat protein
37-like [Apis florea]
Length = 1298
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 16/167 (9%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG-DMEQSAKCFQDLI 227
W LG+I + S+ + + D N C+ LG Y + G DME+S +C+Q +
Sbjct: 444 WLLLGIIYWEMAEYNYSLMAFLNGIKADRYNWKCLVYLGHYYREYGNDMERSRRCYQSAL 503
Query: 228 LKDQNHPAALI--NYAALLLCKYGSVLAGAGANTGEGA------------CLDQASAVNV 273
+ N A I + A LL + + T +G+ LDQ +A
Sbjct: 504 QINPNSEEAGIGLSTAYRLLKNQDANIKLLQVLTVQGSGPRWAWLQLGLQYLDQGNAEQA 563
Query: 274 AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
K ++ DP +H W +LA+AY++ G + S+ K ++ +L P
Sbjct: 564 IK-AFQHVIRVDPNDSHCWESLADAYFIRGAYTSALKSYQRVLELCP 609
>gi|451980918|ref|ZP_21929300.1| hypothetical protein NITGR_310031 [Nitrospina gracilis 3/211]
gi|451761840|emb|CCQ90543.1| hypothetical protein NITGR_310031 [Nitrospina gracilis 3/211]
Length = 268
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 83/203 (40%), Gaps = 26/203 (12%)
Query: 41 GDQSGLGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEK 100
GD+S + S +KTG R + + +F + + R A+ YEK
Sbjct: 47 GDESISVVPNESDRATTEKMKTGFD--PRSLDDKSR-YFNIATFHHRNKDYFAALKYYEK 103
Query: 101 AEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQ 160
A+ R + AR IH+ + L+ + G + +E + +L ++++
Sbjct: 104 AK----RLDPTNAR--------IHNNRALIYKEMG-----------KPQEAIGELLQAVR 140
Query: 161 SDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSA 220
D+ +N LGLI K G +++ +DP N + I NL I Y Q ++
Sbjct: 141 LDSNYGKAYNNLGLIYYKMGDGINAVRYFEKATELDPANVESINNLAILYKQQRHYRRAE 200
Query: 221 KCFQDLILKDQNHPAALINYAAL 243
++ +I + HP N A L
Sbjct: 201 LLYRKVINLEPRHPEGYYNLALL 223
>gi|268325019|emb|CBH38607.1| conserved hypothetical protein, containing tetratricopeptide
repeats [uncultured archaeon]
Length = 425
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 84/209 (40%), Gaps = 17/209 (8%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
++ E + ++++ D A +N GL + + +I + + + PN+ N
Sbjct: 215 KQYERAIEDFNKTIELDPNSAAAYNNRGLTYDNLKQYERAIEDFNKTIELIPNHTFAYNN 274
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY--AALLLCKYGSVLAG--------- 254
G+ Y E++ + F I D N AA N A L +Y +
Sbjct: 275 RGLTYNNLKQYERAIEDFNKTIELDPNSAAAYNNRGNAYRKLEEYERAIEDFNKTIELDS 334
Query: 255 --AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 312
AG+ G D A E ++ DP +A I+ N NA+ G + + +
Sbjct: 335 NYAGSYYNRGLTYDDLKQYERAIEDFNKTIELDPNSAVIYTNRGNAFKDLGQYERAIEDY 394
Query: 313 EKAAKLEPN---CMSTRYAVAVSRIKDAE 338
KA +L+PN R +A+S++K+ E
Sbjct: 395 NKAIELDPNDTDAYENR-ELALSKLKEQE 422
>gi|145506301|ref|XP_001439116.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406290|emb|CAK71719.1| unnamed protein product [Paramecium tetraurelia]
Length = 815
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 87/186 (46%), Gaps = 15/186 (8%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIA----------RPELLSLV 121
PK+A A++ G+++ G+ KA+ Y A I L DIA + E +
Sbjct: 37 PKSAIAYYNRGILFCEKGEKEKALKDYNMA--IKLNPNYDIAYYNRGVLFGEQGEKDKAI 94
Query: 122 QIHHAQCLLPESSGDNSLDKELEPEEL---EEILSKLKESMQSDTRQAVVWNTLGLILLK 178
Q ++ L E++ + +++ + ++L E+ L +++ + A +N LG +L
Sbjct: 95 QDYNTVIKLNENNTNAYINRGILFKQLGEHEKALQDYNMAIKLNPNDADAFNNLGNLLDD 154
Query: 179 SGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALI 238
G+ ++ ++ + ++PN+ N G+ + Q G+ E++ + F I D N+ A I
Sbjct: 155 QGQKDKALQNFNTAIKLNPNDATAYYNRGVVFKQKGEKEKALEDFNMAIKFDSNYIDAYI 214
Query: 239 NYAALL 244
N L
Sbjct: 215 NRGVLF 220
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 115/281 (40%), Gaps = 32/281 (11%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLR-CEADIARPELLS-------LVQI 123
P A A++ G+++++ G+ KA+ + A + +A I R L ++
Sbjct: 241 PNYATAYYNRGVVFKQKGEKQKALEDFNMAIKFDSNYIDAYINRGVLFKQQGEKEKALKD 300
Query: 124 HHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQS---DTRQAVVWNTLGLILLKSG 180
++ L + D +++ + ++L E L++ Q+ + + A+ + G++ + G
Sbjct: 301 YNTAIKLNRNYADAYINRGVLFKQLGETKKALQDYNQAIRLNPQYAIGYYNRGVLFCELG 360
Query: 181 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 240
Q ++ +++ ++PN N G+ Y + G++E + K F I + N+ A N
Sbjct: 361 EKQKALQDFKNVIRLNPNYATAYQNRGVLYGEQGEIENALKDFDMAIKLNPNYATAYQN- 419
Query: 241 AALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 300
+L + G + E A D A+K +P A + N N +
Sbjct: 420 RGVLFGEQGQI---------ENALTD-----------FDIAIKLNPTYASAYQNRGNLFD 459
Query: 301 LTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ 341
G+ + + A KL PN Y + + E+ Q
Sbjct: 460 KKGEKDKALQDYNMAIKLNPNYDIAYYTRGLIFKQQGEKVQ 500
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 104/260 (40%), Gaps = 50/260 (19%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A A+ G ++ + G+ KA+ Y A I L DIA ++ + L+
Sbjct: 445 PTYASAYQNRGNLFDKKGEKDKALQDYNMA--IKLNPNYDIA----------YYTRGLIF 492
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+ G E + L +++Q + A + G++ + G ++ ++ +
Sbjct: 493 KQQG-----------EKVQALQDFDKAIQLNLNYATAYYNRGVLYGEQGEIEKALQDFNM 541
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 251
+ ++PN N G+ Y Q G+ E K FQD + + +P NYA +
Sbjct: 542 AIKLNPNYDTAYQNRGVLYKQQGEKE---KAFQDYNMAIKLNP----NYATAYQNR---- 590
Query: 252 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY----LTGDHRS 307
G +++ +G Q A + A+K +P N A AYY L G+
Sbjct: 591 --GKQSSSRKGVLYKQQGEKEKALQDYHTAIKLNP-------NFATAYYNRGVLFGEQGE 641
Query: 308 SGKCLE---KAAKLEPNCMS 324
K L+ +A +L PN +
Sbjct: 642 KEKALQDYNEAIQLNPNYAT 661
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/173 (18%), Positives = 75/173 (43%), Gaps = 23/173 (13%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P +A A++ G+++++ G+ KA+ + A ++ ++ + + + + +L
Sbjct: 173 PNDATAYYNRGVVFKQKGEKEKALEDFNMA----IKFDS--------NYIDAYINRGVLF 220
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+ G E E+ L +++ + A + G++ + G Q ++ +
Sbjct: 221 KQQG-----------EKEKALHDYNLAIKLNPNYATAYYNRGVVFKQKGEKQKALEDFNM 269
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
+ D N D N G+ + Q G+ E++ K + I ++N+ A IN L
Sbjct: 270 AIKFDSNYIDAYINRGVLFKQQGEKEKALKDYNTAIKLNRNYADAYINRGVLF 322
>gi|427731903|ref|YP_007078140.1| glycosyl transferase family protein [Nostoc sp. PCC 7524]
gi|427367822|gb|AFY50543.1| glycosyl transferase [Nostoc sp. PCC 7524]
Length = 395
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 69/158 (43%), Gaps = 21/158 (13%)
Query: 78 HFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDN 137
H+ LG+ Y RL P +A+S Y+ A ++ + +L L ++ LL N
Sbjct: 242 HYHLGIAYNRLNNPQQAISHYQNAIKLPIY--------PMLKLGAYNNLGNLLKAVGDIN 293
Query: 138 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 197
K E +++ D A+ + LG+I G +I+ + + P
Sbjct: 294 GAKKAYE------------TALKIDPNFAIGYYNLGMIFKAVGMFTDAIACYQKAIRLQP 341
Query: 198 NNCDCIGNLGIAYFQSGDMEQSAKCFQD-LILKDQNHP 234
+ NLG+ + G+++ S F++ ++L +QN+P
Sbjct: 342 KYAEAYQNLGVVQLKVGNVQASVTAFKNAILLHEQNNP 379
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 71/172 (41%), Gaps = 22/172 (12%)
Query: 168 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIG----NLGIAYFQSGDMEQSAKCF 223
V + LG + ++ G+L I +L + N + + +LGIAY + + +Q+ +
Sbjct: 203 VCSKLGALYVEIGKLNQGIELLKRGITACQENYEVLYELHYHLGIAYNRLNNPQQAISHY 262
Query: 224 QDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALK 283
Q+ A+ L Y + GA N G L +N AK+ ALK
Sbjct: 263 QN----------------AIKLPIYPMLKLGAYNNLGN--LLKAVGDINGAKKAYETALK 304
Query: 284 ADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 335
DP A + NL + G + C +KA +L+P + V ++K
Sbjct: 305 IDPNFAIGYYNLGMIFKAVGMFTDAIACYQKAIRLQPKYAEAYQNLGVVQLK 356
>gi|222612959|gb|EEE51091.1| hypothetical protein OsJ_31796 [Oryza sativa Japonica Group]
Length = 357
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 63/135 (46%)
Query: 102 EEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQS 161
++L+R E D++ EL V+ A G L ++ P ++ + +++ +
Sbjct: 199 RQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAAIKYLQQAIQKWDRD 258
Query: 162 DTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 221
+ A V+N LG+ + +L SI + + P NLG AY Q D++ + K
Sbjct: 259 EQDLAQVYNALGVSYKRDNKLDKSIQQFEKAVELQPGYVTAWNNLGDAYEQKKDLKSALK 318
Query: 222 CFQDLILKDQNHPAA 236
F++++L D N+ A
Sbjct: 319 AFEEVLLFDPNNTVA 333
>gi|425450472|ref|ZP_18830298.1| Similar to tr|Q96301|Q96301 [Microcystis aeruginosa PCC 7941]
gi|389768683|emb|CCI06276.1| Similar to tr|Q96301|Q96301 [Microcystis aeruginosa PCC 7941]
Length = 1254
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 80/213 (37%), Gaps = 23/213 (10%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
EE E+ ++ S+Q D+ V+ +L + + + L + P+N + N
Sbjct: 1063 EETEKAIACYSHSVQLDSTNMEVYKSLAQLYDRQENYAKAEKYYRCALLLQPDNLELRYN 1122
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
LG+ ++ +++ CFQ +I Q P I Y L G
Sbjct: 1123 LGVVLYEQEKFDKAVSCFQKII---QAKPQDAIAYLHL------------------GISY 1161
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP--NCM 323
Q + AK C A++ DP A + NL Y D + + C + + +P
Sbjct: 1162 KQQKLLTKAKSCFEKAIELDPDYAMAYYNLGVVYSCQPDEKKAVDCFRQCLRCDPANKLA 1221
Query: 324 STRYAVAVSRIKDAERSQEPTEQLSWAGNEMAS 356
T A+S IK+ + W N++ +
Sbjct: 1222 HTALLFALSGIKEVSSEEIYDASSRWYRNKIQT 1254
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 80/202 (39%), Gaps = 21/202 (10%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
ELE + ++++ D A ++ LG + + G+L+ +IS + P+ NL
Sbjct: 996 ELESAKNFYLQAIKVDATYAKSYHNLGFLAAQQGQLEEAISYYQQAIESQPDYPTAFYNL 1055
Query: 207 GIAYFQSGDMEQSAKCFQ-----------------DLILKDQNHPAALINYAALLLCKYG 249
G+ Y Q + E++ C+ L + +N+ A Y LL +
Sbjct: 1056 GLVYEQLEETEKAIACYSHSVQLDSTNMEVYKSLAQLYDRQENYAKAEKYYRCALLLQPD 1115
Query: 250 SVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 309
++ G L + + A C ++A P+ A + +L +Y +
Sbjct: 1116 NL----ELRYNLGVVLYEQEKFDKAVSCFQKIIQAKPQDAIAYLHLGISYKQQKLLTKAK 1171
Query: 310 KCLEKAAKLEPNCMSTRYAVAV 331
C EKA +L+P+ Y + V
Sbjct: 1172 SCFEKAIELDPDYAMAYYNLGV 1193
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 118/288 (40%), Gaps = 63/288 (21%)
Query: 16 NKLGKCRSRISSKMDSALEF-----GVDADGDQS-----GLGTSSSSREEKVSSLKTGLV 65
++LG+ ++ ++ +++SA F VDA +S L EE +S + +
Sbjct: 985 HQLGREKT-LTGELESAKNFYLQAIKVDATYAKSYHNLGFLAAQQGQLEEAISYYQQAI- 1042
Query: 66 HVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL-SLVQIH 124
P A + LGL+Y++L + KA++ Y + ++ D E+ SL Q++
Sbjct: 1043 ---ESQPDYPTAFYNLGLVYEQLEETEKAIACYSHSVQL------DSTNMEVYKSLAQLY 1093
Query: 125 HAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQS 184
Q ++ L+P+ LE + +N LG++L + +
Sbjct: 1094 DRQENYAKAEKYYRCALLLQPDNLE-----------------LRYN-LGVVLYEQEKFDK 1135
Query: 185 SISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
++S ++ P + +LGI+Y Q + ++ CF+ I D ++ A N +
Sbjct: 1136 AVSCFQKIIQAKPQDAIAYLHLGISYKQQKLLTKAKSCFEKAIELDPDYAMAYYNLGVVY 1195
Query: 245 LCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADP--KAAH 290
C+ D+ AV+ ++C L+ DP K AH
Sbjct: 1196 SCQ-----------------PDEKKAVDCFRQC----LRCDPANKLAH 1222
>gi|343509819|ref|ZP_08747081.1| hypothetical protein VIS19158_05338 [Vibrio scophthalmi LMG 19158]
gi|342803616|gb|EGU38966.1| hypothetical protein VIS19158_05338 [Vibrio scophthalmi LMG 19158]
Length = 337
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 77/177 (43%), Gaps = 32/177 (18%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI-LLRCEADIARPELLSLVQIHHAQCLL 130
P N A LG +Y R G+ + +S Y KA LLR D
Sbjct: 116 PNNVGALEELGSLYSRNGRTDEGMSYYIKAVNADLLRLGED------------------- 156
Query: 131 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
P + +N L E + E LK QS +N LG++L G + S+
Sbjct: 157 PTITANN-----LSVESVAE----LKHDAQSPDG---AYNGLGVLLDVKGEHDLAQSLFV 204
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK 247
S + +D N D I NLG +Y+ SGD ++A + +++D+N+ AL N A + L +
Sbjct: 205 SAIEIDDKNLDAIINLGYSYYMSGDYPKAAVYTKAAVMRDENNEKALNNLALVYLAQ 261
>gi|334117447|ref|ZP_08491538.1| histidine kinase [Microcoleus vaginatus FGP-2]
gi|333460556|gb|EGK89164.1| histidine kinase [Microcoleus vaginatus FGP-2]
Length = 949
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 23/188 (12%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+ E+ ++S+Q AV + L +G+L+ + L ++PNN +
Sbjct: 279 QFEKAWQFFEQSLQIKPDNAVTLSCYANALASNGQLEKAWQFFERSLQIEPNNQRILNQY 338
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
A +G E+ + + + + N P L +YA L A+TG+
Sbjct: 339 ATALASTGQHEKVVQILERSLQLEPNDPITLNHYATAL------------ASTGQHEK-- 384
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST- 325
E L +LK +P A + ANA TG H + + E++ +LEPN T
Sbjct: 385 -------TLELLKRSLKLEPNAPITLSRYANALASTGQHEKALQFFERSLQLEPNDAITL 437
Query: 326 -RYAVAVS 332
RYA A++
Sbjct: 438 SRYANALA 445
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 92/243 (37%), Gaps = 49/243 (20%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
E+ + L+ +++ + + N L+K+ + + +L LL ++P N +
Sbjct: 145 EKAIGILESALKFEPGNKITLNVYAEALIKNENYRKAFDILERLLVIEPTNNTTVRTYAN 204
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYA--------------------------A 242
A +G E++ + F+ + ++ ++P L YA A
Sbjct: 205 ALASNGQFEKAQQIFERALQREPDNPITLSQYANALASNGQLDQALEFFERSLQIPPDDA 264
Query: 243 LLLCKYGSVLAGAGA-----------------NTGEGACLDQASAVN----VAKECLLAA 281
+ L +Y + LA G N +C A A N A + +
Sbjct: 265 VTLSRYANALASNGQFEKAWQFFEQSLQIKPDNAVTLSCYANALASNGQLEKAWQFFERS 324
Query: 282 LKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST--RYAVAVSRIKDAER 339
L+ +P I A A TG H + LE++ +LEPN T YA A++ E+
Sbjct: 325 LQIEPNNQRILNQYATALASTGQHEKVVQILERSLQLEPNDPITLNHYATALASTGQHEK 384
Query: 340 SQE 342
+ E
Sbjct: 385 TLE 387
>gi|434402457|ref|YP_007145342.1| Tfp pilus assembly protein PilF [Cylindrospermum stagnale PCC 7417]
gi|428256712|gb|AFZ22662.1| Tfp pilus assembly protein PilF [Cylindrospermum stagnale PCC 7417]
Length = 496
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 114/298 (38%), Gaps = 44/298 (14%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI-----LLRCEADIARPELL----SLVQ 122
P A A++ G LG A++ Y++A +I + AR +L ++
Sbjct: 128 PNFADAYYNRGNARAELGDMPGAITDYDQAIKINPNFAVAYYNRGNARAKLGDMQGAITD 187
Query: 123 IHHAQCLLPESSGDNSLDKELEPE--ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSG 180
+ A + P + + L E +++ ++ L ++++ + A + G + K G
Sbjct: 188 FNQAININPNYAEAYTNRGTLRAELGDMQGAITDLNQAIKINPNFAKAYYNRGTLRGKLG 247
Query: 181 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 240
+Q +I+ L+ + ++PN + GN G A + GDM+ + F I + N P N
Sbjct: 248 DMQGAITDLNQAIKINPNYTEAYGNRGNARAELGDMQTAITDFNQAIKTNPNDPLPYNNR 307
Query: 241 AALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLA-------------------- 280
A K G + +GA D A+N+ A
Sbjct: 308 AN-ARAKLGDM---------QGAITDFNQAININPNYANAYKNRGFVRAKLGDMQGAITD 357
Query: 281 ---ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 335
A+ +P A + N NA Y GD + + +A + PN + +R K
Sbjct: 358 YNQAININPNYADAYFNRGNARYKLGDMQGAITDYNQAININPNFADAYFNRGNARYK 415
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/176 (19%), Positives = 71/176 (40%), Gaps = 21/176 (11%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+++ ++ ++++++ + +N K G +Q +I+ + + ++PN + N
Sbjct: 282 DMQTAITDFNQAIKTNPNDPLPYNNRANARAKLGDMQGAITDFNQAININPNYANAYKNR 341
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G + GDM+ + + I + N+ A N K G + +GA D
Sbjct: 342 GFVRAKLGDMQGAITDYNQAININPNYADAYFNRGNARY-KLGDM---------QGAITD 391
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
A+N+ +P A + N NA Y GD + + +A + PN
Sbjct: 392 YNQAINI-----------NPNFADAYFNRGNARYKLGDMQGAITDYNQAININPNF 436
>gi|333987462|ref|YP_004520069.1| hypothetical protein MSWAN_1251 [Methanobacterium sp. SWAN-1]
gi|333825606|gb|AEG18268.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 1161
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 107/286 (37%), Gaps = 39/286 (13%)
Query: 74 NAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPEL-LSLVQIHHAQCLLPE 132
NA A F G++++ LG+ +A+ YEKA EI P+L LS +I +L +
Sbjct: 264 NAEAWFNKGVIFETLGKYDEAIEYYEKALEI---------APDLALSYHRISEILRILGK 314
Query: 133 SSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSL 192
EE + +S+ D++ A W + GL L GR + SI+
Sbjct: 315 ---------------YEEAIKYQDKSIALDSKNAEFWFSKGLSLSDLGRFEESINPFDKA 359
Query: 193 LAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN----------YAA 242
L ++PN D + E + C I + N P N Y
Sbjct: 360 LNINPNFSDAYSAKCASLRNLRKNEDALNCINTAIEFNPNSPELWFNKGLSLIDLKRYEE 419
Query: 243 LLLCKYGSVLAG---AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 299
+ C +V A A +G L+ N A +C AL D + N ++
Sbjct: 420 SIRCFNEAVTLNHKFALAYNSKGFSLNHLDKFNEAIKCFNRALNIDSTLETAFNNKGISH 479
Query: 300 YLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTE 345
G + + +C +A ++ P + Y S + + E E E
Sbjct: 480 LALGQYEKALECFNEALRINP-YFTEVYVNKGSALGNMEEYNEEIE 524
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 35/179 (19%), Positives = 69/179 (38%), Gaps = 21/179 (11%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
++ + EE + E++ + + A+ +N+ G L + +I + L +D
Sbjct: 412 IDLKRYEESIRCFNEAVTLNHKFALAYNSKGFSLNHLDKFNEAIKCFNRALNIDSTLETA 471
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 262
N GI++ G E++ +CF + AL + Y + + +G
Sbjct: 472 FNNKGISHLALGQYEKALECFNE----------------ALRINPYFTEVY-----VNKG 510
Query: 263 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
+ L N EC AL+ + W N +A G + S C ++ ++ PN
Sbjct: 511 SALGNMEEYNEEIECYDKALELNQYIFEAWYNKGSALSNLGKYNESINCFNQSIEINPN 569
>gi|29653887|ref|NP_819579.1| hypothetical protein CBU_0547 [Coxiella burnetii RSA 493]
gi|161831595|ref|YP_001596478.1| TPR repeat-containing methyltransferase [Coxiella burnetii RSA 331]
gi|29541150|gb|AAO90093.1| tetratricopeptide repeat family protein [Coxiella burnetii RSA 493]
gi|161763462|gb|ABX79104.1| tetratricopeptide repeat protein/methyltransferase [Coxiella
burnetii RSA 331]
Length = 561
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 90/223 (40%), Gaps = 31/223 (13%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
+E E + +++LK ++ + + ++ L + + G +I+ LA++P N D
Sbjct: 149 IELENYHQAIAELKRTVAMSSHHSAAFSQLAHVYMYLGDFSKAITYYEKRLALEPENADA 208
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 262
+ G+A+ + +++ F + +L + HP C Y LA A G+
Sbjct: 209 QYDCGLAHLKDNQFQKAIDYFTNALLLNPEHPD----------CHYS--LATAYLQRGDH 256
Query: 263 ACLDQASAVNVAKECLLAALKADPKAAHI--WANLANAYYLTGDHRSSGKCLEKAAKLEP 320
KE LL L+ K I + N+ + HR + ++A L+P
Sbjct: 257 ------------KEALLHYLRQLEKKPQIECYYNVGVLHMYQERHREAIDYFKQALTLDP 304
Query: 321 NCMSTRYAVA-----VSRIKDAERSQEPTEQLSWAGNEMASIL 358
N +A +++IK A E T L +E+ IL
Sbjct: 305 NYREAHLNIAAVYLKINQIKQAIEHYESTLVLKPNDSEIEHIL 347
>gi|222053746|ref|YP_002536108.1| Exostosin family protein [Geobacter daltonii FRC-32]
gi|221563035|gb|ACM19007.1| Exostosin family protein [Geobacter daltonii FRC-32]
Length = 794
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%)
Query: 157 ESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 216
+++Q RQ V N LGL ++SGRL + + +A+DP N + NL + +GD+
Sbjct: 29 QALQLAPRQPAVLNNLGLAYVESGRLDEAKVIFERFIALDPENAEPWNNLAVVVQMAGDL 88
Query: 217 EQSAKCFQDLILKDQNHPAALIN 239
E + + F+ + + + A N
Sbjct: 89 ETATELFRKALALNPQYAEAWYN 111
>gi|345869212|ref|ZP_08821172.1| tetratricopeptide repeat family protein [Bizionia argentinensis
JUB59]
gi|344046374|gb|EGV42038.1| tetratricopeptide repeat family protein [Bizionia argentinensis
JUB59]
Length = 415
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 8/148 (5%)
Query: 180 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 239
G L ++ + +DPNN D NLG+ ++ D +++ + +Q +I D + A N
Sbjct: 266 GNLDEYRVLIEKAIELDPNNIDLFYNLGVLASEAKDNDKAKEYYQKVIDMDPTYINAQTN 325
Query: 240 YAALLLCKYGSVLA---GAGANTGEGACLDQ--ASAVNVAKEC---LLAALKADPKAAHI 291
AAL+L + S++ G G ++ + D+ N+ K L A L+ DP + +
Sbjct: 326 LAALILGEEASLIEEMNGLGTSSADNKRYDELKKERTNIYKTAIPYLEAVLEIDPNSIEV 385
Query: 292 WANLANAYYLTGDHRSSGKCLEKAAKLE 319
L N Y D + + K +L+
Sbjct: 386 TTTLMNIYRAIPDDANYKRLKNKIEELQ 413
>gi|118381790|ref|XP_001024055.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89305822|gb|EAS03810.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 376
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 114/317 (35%), Gaps = 41/317 (12%)
Query: 170 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 229
N LG I ++ + L ++P C I NLG Y+ G +E + + ++ +
Sbjct: 58 NDLGKICQNKKNIEDAKLHYEKALKINPQYCMAIVNLGTVYYGQGMIEDAQQQYEKALQL 117
Query: 230 DQNHPAALINYAALLLCK---------YGSVLAG----AGANTGEGACLDQASAVNVAKE 276
D A N A L K Y L A G A+
Sbjct: 118 DNKFYQAHFNLALLYDDKGMIEEAKQYYEQTLQANQEYYPALYNLGLIYQNEGHYQEARR 177
Query: 277 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV----- 331
C L L +P+ + +L Y+ G + EKA ++ + +A
Sbjct: 178 CYLITLDINPQFYQAYISLGCIYFSLGMLEDAQNYCEKALQINNKSLDAHLNLAFIYDSK 237
Query: 332 SRIKDAERSQEPTEQ----LSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAA 387
I++A +S E Q L A N + I R+ + ++ E + + + +++
Sbjct: 238 DMIEEARQSYEQVLQINPKLYQAQNNLGLIYRKKEMLE-EAKVCYEKSIQINDQYYQAYY 296
Query: 388 AFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYL 447
S + DQ + + AK+CL A+K +P NL YY
Sbjct: 297 NLS-----------------SIYYDQGN-IQEAKQCLEKAIKINPLYDQAHYNLGLIYYN 338
Query: 448 TGDHRSSGKCLEKVLMV 464
G+ + +C KV+++
Sbjct: 339 QGELEEAKRCFMKVVLI 355
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 78/187 (41%), Gaps = 15/187 (8%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
+EE ++++Q++ LGLI G Q + L ++P +LG
Sbjct: 138 IEEAKQYYEQTLQANQEYYPALYNLGLIYQNEGHYQEARRCYLITLDINPQFYQAYISLG 197
Query: 208 IAYFQSGDMEQSAK-CFQDLILKDQNHPAALINYAALLLCK---------YGSVLAG--- 254
YF G +E + C + L + +++ A L N A + K Y VL
Sbjct: 198 CIYFSLGMLEDAQNYCEKALQINNKSLDAHL-NLAFIYDSKDMIEEARQSYEQVLQINPK 256
Query: 255 -AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
A G + + AK C +++ + + + NL++ YY G+ + + +CLE
Sbjct: 257 LYQAQNNLGLIYRKKEMLEEAKVCYEKSIQINDQYYQAYYNLSSIYYDQGNIQEAKQCLE 316
Query: 314 KAAKLEP 320
KA K+ P
Sbjct: 317 KAIKINP 323
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 41/83 (49%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E LEE ++S+Q + + + L I G +Q + L + ++P N
Sbjct: 272 EMLEEAKVCYEKSIQINDQYYQAYYNLSSIYYDQGNIQEAKQCLEKAIKINPLYDQAHYN 331
Query: 206 LGIAYFQSGDMEQSAKCFQDLIL 228
LG+ Y+ G++E++ +CF ++L
Sbjct: 332 LGLIYYNQGELEEAKRCFMKVVL 354
>gi|159904605|ref|YP_001548267.1| hypothetical protein MmarC6_0213 [Methanococcus maripaludis C6]
gi|159886098|gb|ABX01035.1| TPR repeat-containing protein [Methanococcus maripaludis C6]
Length = 409
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 82/191 (42%), Gaps = 19/191 (9%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E+ +E + +S + ++WN LG I ++ + S+I LA+D N
Sbjct: 140 EKYDESIEAFDKSTGNYEEIVLIWNELGYIYYQNEKYDSAIVCFDKALALDRNLKYSFNG 199
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALI----------NYAALLLCKYGSVLAGA 255
G+ Y + +Q+ +CF + I +D+ + A+ NY+ +LC ++
Sbjct: 200 KGLCYEKKEQYDQAIECFDNAIAQDKFYYDAIYNKGIVCYSLKNYSGTILCFEKAIELN- 258
Query: 256 GANTGEGACLDQASAVNVAKECLLA------ALKADPKAAHIWANLANAYYLTGDHRSSG 309
NT +A ++ +E A A++ DP+ W+ + +Y ++ S
Sbjct: 259 --NTNAYCYFYKADSLKCMEEYEKAVLNYEKAVELDPENPVFWSGIGLSYNYLKEYNLSI 316
Query: 310 KCLEKAAKLEP 320
+ EKA ++ P
Sbjct: 317 QAYEKAVQINP 327
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/323 (18%), Positives = 112/323 (34%), Gaps = 39/323 (12%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
EE E+ L +S++ D+ W G+ L + SI
Sbjct: 106 EEYEKALYYFNKSLEIDSSVGKTWFYKGVCLKMLEKYDESIEAFDKSTGNYEEIVLIWNE 165
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
LG Y+Q+ + + CF + D+N + G+G C
Sbjct: 166 LGYIYYQNEKYDSAIVCFDKALALDRNLKYSF---------------------NGKGLCY 204
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
++ + A EC A+ D N Y ++ + C EKA +L N +
Sbjct: 205 EKKEQYDQAIECFDNAIAQDKFYYDAIYNKGIVCYSLKNYSGTILCFEKAIELN-NTNAY 263
Query: 326 RYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEP--PIAWAGFAAVQKTHH 383
Y +K E ++ ++L V+++P P+ W+G
Sbjct: 264 CYFYKADSLKCMEEYEK-------------AVLNYEKAVELDPENPVFWSGIGLSYNYLK 310
Query: 384 EVAAAFETEEN--ELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANL 441
E + + E +++ ++ + + N + C AL+ + K + W L
Sbjct: 311 EYNLSIQAYEKAVQINPKDDVLWSNLGYLQYKNKNYNESISCFEKALELNNKNKYAWNGL 370
Query: 442 ANAYYLTGDHRSSGKCLEKVLMV 464
N+Y L ++ S C EK + +
Sbjct: 371 GNSYLLIKNYEKSLICYEKAIEI 393
>gi|344345623|ref|ZP_08776459.1| hypothetical protein MarpuDRAFT_3273 [Marichromatium purpuratum
984]
gi|343802795|gb|EGV20725.1| hypothetical protein MarpuDRAFT_3273 [Marichromatium purpuratum
984]
Length = 425
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 73/184 (39%), Gaps = 21/184 (11%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
+E LEE LSK + + R +W +G +L +S +S++ + LA++P + +
Sbjct: 152 VEDNRLEEALSKARLLCKKYPRDFFLWKAMGTVLYRSDDCRSALPAMQQALALNPKDPEL 211
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 262
+ LG G + QS CF I ++ A A+ G
Sbjct: 212 LNTLGNILHDLGRLAQSQSCFSRAIALSPDY---------------------AEAHNSLG 250
Query: 263 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
A L + A AL P + ++N+ Y TG+ + + E A +P+
Sbjct: 251 AVLKSLGRFDEAIASYRRALALKPDLSEAYSNIGIVYKDTGELDKARRYYEMALDKDPDN 310
Query: 323 MSTR 326
++ R
Sbjct: 311 LNAR 314
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 41/75 (54%)
Query: 170 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 229
N+LG +L GR +I+ LA+ P+ + N+GI Y +G+++++ + ++ + K
Sbjct: 247 NSLGAVLKSLGRFDEAIASYRRALALKPDLSEAYSNIGIVYKDTGELDKARRYYEMALDK 306
Query: 230 DQNHPAALINYAALL 244
D ++ A N +L
Sbjct: 307 DPDNLNARNNLGGVL 321
>gi|20092504|ref|NP_618579.1| hypothetical protein MA3704 [Methanosarcina acetivorans C2A]
gi|19917772|gb|AAM07059.1| TPR-domain containing protein [Methanosarcina acetivorans C2A]
Length = 1004
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 74/188 (39%), Gaps = 15/188 (7%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
E+ L ++ + + + W G IL R + ++ LA DP+N G
Sbjct: 13 FEKALEAFDALLEINPQDTIAWQYKGNILRYLDRPEEALEAFEKALAFDPDNVSARYFKG 72
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYG------SVLAGA------ 255
+ E++ + F+ ++ KD H AL Y+ L L + G S L+GA
Sbjct: 73 LTLGYLNLPERALEAFERVLEKDPEHSGALY-YSGLALNQLGKHTEAASALSGALEINPE 131
Query: 256 --GANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
GA G L A + L +P A W A AY G R + K E
Sbjct: 132 NPGAWYYRGESLYILGKSAEALKAFEETLALEPSHAGAWEGKAKAYLSLGRKREALKASE 191
Query: 314 KAAKLEPN 321
KA KL+P+
Sbjct: 192 KALKLKPS 199
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 66/161 (40%), Gaps = 17/161 (10%)
Query: 89 GQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEEL 148
G+ L ++ YE+A E E+ + LS +I + LL + +LD
Sbjct: 242 GKLLGSLGRYEEALEAF---ESSLWMDSSLSEAKIKRGKTLLALGNFQQALDS------- 291
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+++++ D W G L G+ ++ L+++P N + +G
Sbjct: 292 ------FRKNLEEDPENFENWGGTGSCFLAFGKYYEAMKAYEKALSIEPENSCIMSGIGE 345
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYG 249
Y+Q GD ++ + F+ + D + A N +LCK G
Sbjct: 346 IYYQLGDYSRALEAFEQALRLDIENGFAW-NGKGNVLCKLG 385
>gi|289209659|ref|YP_003461725.1| PEP-CTERM system TPR-repeat lipoprotein [Thioalkalivibrio sp.
K90mix]
gi|288945290|gb|ADC72989.1| PEP-CTERM system TPR-repeat lipoprotein [Thioalkalivibrio sp.
K90mix]
Length = 935
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 70/176 (39%), Gaps = 21/176 (11%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E+ E+ L + D +N +G LL G + + + L++ P+N N
Sbjct: 463 EQYEQALEATQRLRDKDPENPQGFNLMGAALLGLGEIHEARLIYQEGLSLHPDNSTLALN 522
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
L + G++E + + +DL +D HP + I A L + G + AG
Sbjct: 523 LSSLEVRQGNLETAREILEDLQERDPGHPTSAIRLATLHFQQ-GEMEAG----------- 570
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
K L A++A P + LA A DH ++ LEKA + PN
Sbjct: 571 ---------KRWLQDAIEAHPDRIEPYLMLARAQNQQEDHAAARSTLEKAREHHPN 617
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%)
Query: 165 QAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 224
Q + +TLG++LL+ G +S++ L + P D +L AY SG+ EQ+
Sbjct: 854 QPAILDTLGVVLLEGGDTESALETLQRAYRMSPQAPDIGFHLAQAYQASGETEQARALLT 913
Query: 225 DLILKDQNHP 234
+L+ ++ P
Sbjct: 914 ELLEAHEDFP 923
>gi|398833242|ref|ZP_10591379.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Herbaspirillum sp. YR522]
gi|398221902|gb|EJN08297.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Herbaspirillum sp. YR522]
Length = 653
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 88/204 (43%), Gaps = 27/204 (13%)
Query: 54 EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIA 113
+E + S KT L+ PK+ +AH + Y +L QP A Y++ EI + A
Sbjct: 208 KESLESHKTALL----MDPKDTYAHSKIADAYLKLDQPDLAHEHYQQIIEIAPKDPNSYA 263
Query: 114 RPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLG 173
R V I Q + ++E + K++++ D R A+ +N LG
Sbjct: 264 R----LAVSIAATQ------------------QRIDEAMELFKKALEIDPRHALTYNNLG 301
Query: 174 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD-LILKDQN 232
++L G+ ++S L P + N+ + G +++ K + LI++++
Sbjct: 302 VVLHDQGKTMEALSYFEKALENQPTYLTALHNMSLGQLLHGRLKEGWKNHESRLIVRERT 361
Query: 233 HPAALINYAALLLCKYGSVLAGAG 256
H +I+ L+ K+ V + AG
Sbjct: 362 HVYRVIHKLFNLIPKWDGVSSLAG 385
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 99/243 (40%), Gaps = 34/243 (13%)
Query: 108 CEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAV 167
CEA + R +LV ++A+ L+ + G ++ ++ L+ ++ +D A
Sbjct: 44 CEAVLKRAP--NLVFANNARGLIAQQEGQYAIAEQY-----------LRRAVSADPYNAE 90
Query: 168 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
+LG +LK R+ SI + + +D D L A + D + S F+D +
Sbjct: 91 YITSLGNAVLKQDRIDESIKLYEQAITIDKEFRDARIGLANALHEKNDPDASIAYFEDAV 150
Query: 228 LKDQNHPAALINY-------------AALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 274
++ + P L + +L ++ A A+T G +
Sbjct: 151 RREPDAPGPLSHLGRALTDAKRYDEAVTTILKSLALDISFAPAHTALGEAFYAMGMYKES 210
Query: 275 KECLLAALKADPKAAHIWANLANAYYLTGD-----HRSSGKCLEKAAKLEPNCMSTRYAV 329
E AL DPK + + +A+A YL D H + +E A K +PN + R AV
Sbjct: 211 LESHKTALLMDPKDTYAHSKIADA-YLKLDQPDLAHEHYQQIIEIAPK-DPNSYA-RLAV 267
Query: 330 AVS 332
+++
Sbjct: 268 SIA 270
>gi|253998757|ref|YP_003050820.1| hypothetical protein Msip34_1046 [Methylovorus glucosetrophus
SIP3-4]
gi|253985436|gb|ACT50293.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus glucosetrophus
SIP3-4]
Length = 566
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 92/190 (48%), Gaps = 24/190 (12%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPEL-LSLVQIHHAQCLL 130
PK A HF LG++ LG+ +A++SY KA I L+ + +A L +L + + +
Sbjct: 77 PKIAEIHFNLGVVLGHLGRMDEAIASYRKA--ISLKPDLAVAYFNLGFALQTLGRYEEAI 134
Query: 131 P-------------ESSGDNSLDKELEPE-ELEEILSKLKESMQ--SDTRQAVVWNTLGL 174
P E+ G+ L L+ + ++E+ ++ +++++ +D R + L
Sbjct: 135 PSYRKAAAMQPTFYEAHGN--LGTVLQKQGKMEDAIASYRKALEIHADPRG---YFNLAT 189
Query: 175 ILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP 234
L G+L+ +++ S L + P+ D NLG A G+M+++ K +Q + D H
Sbjct: 190 ALRDHGQLEDAVTAYRSALRMQPDYVDAWNNLGEALRDQGNMDEAVKAYQQALSLDAAHA 249
Query: 235 AALINYAALL 244
AA N A L
Sbjct: 250 AANYNLAEFL 259
>gi|357142312|ref|XP_003572530.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC-like [Brachypodium
distachyon]
Length = 1001
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 84/202 (41%), Gaps = 14/202 (6%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
++ + + ++Q+ A+ + L I + G+L ++ + + DP + N+G
Sbjct: 298 QDAIMSYQRALQARPDYAMAYGNLATIYYEQGQLDMAVRCYNQAIVCDPQFIEAYNNMGN 357
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL-----LLCKYGSVL-AGAGANTGEG 262
A SG +E++ C++ + NHP AL N + L+ S A +G
Sbjct: 358 ALKDSGRVEEAINCYRSCLALQANHPQALTNLGNIYMEWNLVTTAASFYKAAISVTSGLS 417
Query: 263 ACLDQASAV-----NVAK--ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 315
+ L+ + + N A C L+ DP AA N N + G + + +A
Sbjct: 418 SPLNNLALIYKQQGNYADAITCYTEVLRIDPTAADALVNRGNTFKEIGRVNEAIQDYVQA 477
Query: 316 AKLEPNCMSTRYAVAVSRIKDA 337
A + P M+ +A S KD+
Sbjct: 478 ATIRPT-MAEAHANLASAYKDS 498
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 64/174 (36%), Gaps = 37/174 (21%)
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
LG I + I LA+DP +C GN+ A+ + GD++ + + + I
Sbjct: 117 LGAIYYQIRNYDMCIEKNEEALAIDPQFAECYGNMANAWKEKGDVDLAIRYYLTAIQLRS 176
Query: 232 NHPAALINYAALLLCKYGSVLAGAGANTGE----GACLDQASAVNV-------------- 273
N C S LA A G C QA A+N
Sbjct: 177 N------------FCDAWSNLASAYTRKGRLNDAAQCCRQALAINPRLVDAHSNLGNLMK 224
Query: 274 -------AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
A C + AL DP+ A W+NLA + GD + ++A KL+P
Sbjct: 225 SQGFIQEAYSCYIEALHIDPRFAIAWSNLAGLFMEAGDLDKALLYYKEAIKLKP 278
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 105/288 (36%), Gaps = 86/288 (29%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL----SLVQIHHAQ 127
P A AH G +Y+ +G+P A+ SY++A + ARP+ +L I++ Q
Sbjct: 278 PSFADAHLNQGNVYKAMGKPQDAIMSYQRALQ---------ARPDYAMAYGNLATIYYEQ 328
Query: 128 CLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSIS 187
+L+ + +++ D + +N +G L SGR++ +I+
Sbjct: 329 ------------------GQLDMAVRCYNQAIVCDPQFIEAYNNMGNALKDSGRVEEAIN 370
Query: 188 VLSSLLAVDPNNCDCIGNLG----------------------------------IAYFQS 213
S LA+ N+ + NLG + Y Q
Sbjct: 371 CYRSCLALQANHPQALTNLGNIYMEWNLVTTAASFYKAAISVTSGLSSPLNNLALIYKQQ 430
Query: 214 GDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNV 273
G+ + C+ +++ D AL+N G + VN
Sbjct: 431 GNYADAITCYTEVLRIDPTAADALVN---------------------RGNTFKEIGRVNE 469
Query: 274 AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
A + + A P A ANLA+AY +G ++ ++A L P+
Sbjct: 470 AIQDYVQAATIRPTMAEAHANLASAYKDSGHVETAIVSYKQALHLRPD 517
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 71/187 (37%), Gaps = 14/187 (7%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
W+ L + GRL + LA++P D NLG G ++++ C+ + +
Sbjct: 182 WSNLASAYTRKGRLNDAAQCCRQALAINPRLVDAHSNLGNLMKSQGFIQEAYSCYIEALH 241
Query: 229 KDQNHPAALINYAALL---------LCKYGSVL----AGAGANTGEGACLDQASAVNVAK 275
D A N A L L Y + + A A+ +G A
Sbjct: 242 IDPRFAIAWSNLAGLFMEAGDLDKALLYYKEAIKLKPSFADAHLNQGNVYKAMGKPQDAI 301
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 335
AL+A P A + NLA YY G + +C +A +P + Y + +K
Sbjct: 302 MSYQRALQARPDYAMAYGNLATIYYEQGQLDMAVRCYNQAIVCDPQFIEA-YNNMGNALK 360
Query: 336 DAERSQE 342
D+ R +E
Sbjct: 361 DSGRVEE 367
>gi|73671072|ref|YP_307087.1| TPR domain-containing protein [Methanosarcina barkeri str. Fusaro]
gi|72398234|gb|AAZ72507.1| TPR-domain containing protein [Methanosarcina barkeri str. Fusaro]
Length = 1979
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 90/228 (39%), Gaps = 17/228 (7%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
+EE L L +S++ + +W GLILL +G+ + ++ L + + P+N C N G
Sbjct: 429 IEEALDSLAQSLEKEPENYGLWLQQGLILLDNGKFEPALKALEKVAELKPDNDACWMNKG 488
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAG------------- 254
A + E++ + F++ L+ + N ++L K G
Sbjct: 489 YALYSMDRYEEALEDFEE-GLRLNPYLEKGWNNKGIVLGKLGRTEEALEAFEKAVSLRPD 547
Query: 255 -AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
A G L A E LK +P+ N A G ++ +C E
Sbjct: 548 FEDAWKNRGLILLAVDDYEKASEAFDEVLKTNPEDLDSIYNRGTALLKLGKTETALECFE 607
Query: 314 KAAKLEPNCMSTRYAVAVSRIK--DAERSQEPTEQLSWAGNEMASILR 359
K L P+ Y++AV++ K E + E E+L+ E I R
Sbjct: 608 KILSLNPDYPDLLYSLAVAQAKLGKQEEALETFEKLAAKNPEDLKIQR 655
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 67/157 (42%), Gaps = 23/157 (14%)
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF-QDLILKDQ 231
GL L+K R + SI+V + ++ D + + N G+A + E++ F Q L + +
Sbjct: 12 GLGLIKQKRYEKSINVFNKIVDKDSGHTGALFNRGLALLKIKKPEEALDSFDQVLHFEPE 71
Query: 232 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 291
N A L K G LA L++ A A E AL+ +P I
Sbjct: 72 NFDA---------LYKKGIALA----------TLEKFEA---ALETYDNALEINPDNPKI 109
Query: 292 WANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 328
W A+ + +S C EKA +LEP C S YA
Sbjct: 110 WYQKGLAFAELEKNEASILCFEKAIELEPECGSAWYA 146
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 41/220 (18%), Positives = 82/220 (37%), Gaps = 32/220 (14%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
EE L +E ++ + WN G++L K GR + ++ +++ P+ D N G+
Sbjct: 498 EEALEDFEEGLRLNPYLEKGWNNKGIVLGKLGRTEEALEAFEKAVSLRPDFEDAWKNRGL 557
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
D E++++ F +++ + ++ N G L +
Sbjct: 558 ILLAVDDYEKASEAFDEVLKTNPEDLDSIYN---------------------RGTALLKL 596
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST--- 325
A EC L +P + +LA A G + + EK A P +
Sbjct: 597 GKTETALECFEKILSLNPDYPDLLYSLAVAQAKLGKQEEALETFEKLAAKNPEDLKIQRR 656
Query: 326 --RYAVAVSRIK------DAERSQEPTEQLSWAGNEMASI 357
++A+ + + D S++P + +W +A I
Sbjct: 657 KGKFAMEIGKYDTALQAFDQVLSEKPESREAWYRKGLALI 696
>gi|333980826|ref|YP_004518771.1| hypothetical protein Desku_3490 [Desulfotomaculum kuznetsovii DSM
6115]
gi|333824307|gb|AEG16970.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 211
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 21/163 (12%)
Query: 159 MQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQ 218
+QS+ A LG++L++ GRL + ++ ++ + NLG YF+ G++E+
Sbjct: 18 LQSNPGCATAKYNLGVMLMEQGRLDEAKTLFEEAISDGTRMFEAYVNLGYIYFKQGNLEK 77
Query: 219 SAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECL 278
+C + + + P YA L G Q + A E L
Sbjct: 78 VEECNRKAV---EIEPRYARGYANL------------------GFAYLQMEKTDEAIEVL 116
Query: 279 LAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
A++ +P+ W NLANAY G+ + + +K ++ P+
Sbjct: 117 HKAIELNPRIVQAWCNLANAYLQKGELDRAIETNQKLLEMAPD 159
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 73/176 (41%), Gaps = 21/176 (11%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
+E L+E + +E++ TR + LG I K G L+ + ++P
Sbjct: 36 MEQGRLDEAKTLFEEAISDGTRMFEAYVNLGYIYFKQGNLEKVEECNRKAVEIEPRYARG 95
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 262
NLG AY Q ME++ + + L H A +N + + LA A GE
Sbjct: 96 YANLGFAYLQ---MEKTDEAIEVL------HKAIELNPR---IVQAWCNLANAYLQKGE- 142
Query: 263 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 318
LD+A N L + D H NLA AYYL GD + L++A +L
Sbjct: 143 --LDRAIETNQK----LLEMAPDFSLGH--NNLACAYYLKGDMIRAAGHLKRALEL 190
>gi|443328579|ref|ZP_21057175.1| TPR repeat-containing protein [Xenococcus sp. PCC 7305]
gi|442791878|gb|ELS01369.1| TPR repeat-containing protein [Xenococcus sp. PCC 7305]
Length = 1614
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 107/298 (35%), Gaps = 37/298 (12%)
Query: 32 ALEFGVDADGDQSGLGTSSSSREEKVSSLKTGLVHVARKMPK--------NAHAHFLLGL 83
+L+ G DA Q LG + R +S L V AR + + A AH L G
Sbjct: 446 SLQVGEDASQIQPWLG---NGRVYDLSPLLKDFVDTARVIEQLDLVITVDTAVAH-LAGA 501
Query: 84 MYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKEL 143
M G+P+ + LL C+ P + Q L L
Sbjct: 502 M----GKPVWVLLPCVPDWRWLLECQDSPWYPTMRLFRQPKRGDWASVFEQVKKKLQAVL 557
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
E E + +L +Q + LG+ KSG++ ++ S +L P++
Sbjct: 558 EGESPIFPVKRLTIQLQPTNHTEIKKFELGIKHYKSGQISAAQSCFQEVLQEQPDHVIAY 617
Query: 204 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGA 263
NLG+ Y + D ++ KC+ I + N A ++ G
Sbjct: 618 FNLGVIYEKQRDWSKALKCYHRAIQLNPN---------------------DARFHSNMGN 656
Query: 264 CLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
+ +N A EC A+K P + NL Y G + +C +KA L+P+
Sbjct: 657 IYLKKVQLNQAFECYQRAIKTQPDYVQAYTNLGKVYLDQGKSAEAFQCNQKAIALKPD 714
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 67/177 (37%), Gaps = 21/177 (11%)
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
+E +Q + + LG+I K ++ + ++PN+ N+G Y +
Sbjct: 603 FQEVLQEQPDHVIAYFNLGVIYEKQRDWSKALKCYHRAIQLNPNDARFHSNMGNIYLKKV 662
Query: 215 DMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 274
+ Q+ +C+Q I ++ A N G V G + C +A
Sbjct: 663 QLNQAFECYQRAIKTQPDYVQAYTN--------LGKVYLDQGKSAEAFQCNQKA------ 708
Query: 275 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 331
ALK D AH +NLA Y ++ C +KA L+P+ +AV
Sbjct: 709 -----IALKPDYAEAH--SNLAVVYQELEQFDNAITCCQKAISLKPDYAEAHNNLAV 758
>gi|149178854|ref|ZP_01857434.1| hypothetical protein PM8797T_17774 [Planctomyces maris DSM 8797]
gi|148842329|gb|EDL56712.1| hypothetical protein PM8797T_17774 [Planctomyces maris DSM 8797]
Length = 467
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 97/253 (38%), Gaps = 52/253 (20%)
Query: 75 AHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCL-LPES 133
A+ H+ G++Y L +P +A + E + L H A L LP++
Sbjct: 145 ANFHYQRGMIYLPLNKPQEAAQDFT----------------ETIKLSPDHFAALLALPDA 188
Query: 134 ---SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
+G+N E L+ + +Q VV+N + + G+LQ +I+ S
Sbjct: 189 YALAGNN-----------EMALASFNQVIQKQPNSPVVYNNRAMFYQQQGKLQEAINDFS 237
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 250
+ ++P I N G AY + G + + + + N P +L G
Sbjct: 238 RAIQIEPKYHHAITNRGFAYLEGGKPDTAEADLTQSLSIEPNQP--------FVLGMRGE 289
Query: 251 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGK 310
G T A DQ AV + DP+ + ++L +Y+ ++ S+
Sbjct: 290 ARLLQGKIT--EAIADQKKAVQM-----------DPQNPALHSDLGFSYFFNKEYPSALS 336
Query: 311 CLEKAAKLEPNCM 323
+ AA+L P M
Sbjct: 337 EFKLAAQLAPEQM 349
>gi|196000432|ref|XP_002110084.1| hypothetical protein TRIADDRAFT_53679 [Trichoplax adhaerens]
gi|190588208|gb|EDV28250.1| hypothetical protein TRIADDRAFT_53679 [Trichoplax adhaerens]
Length = 1330
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 126/319 (39%), Gaps = 61/319 (19%)
Query: 38 DADGDQSGLGTS---SSSREEKVS----SLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQ 90
D G + LG + EE +S SLK L + P A ++ +G +Y G+
Sbjct: 1031 DVAGSYNNLGNAYRHQGKHEEAISMYEKSLKITLSVLGHNHPDIAASYNNMGAVYSNQGK 1090
Query: 91 PLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEE 150
+A+S YEK+ +I L D P++ S +N + +LEE
Sbjct: 1091 YEEAISMYEKSLKIRLSV-LDHNHPDI--------------AGSYNNLGNAHRHQGKLEE 1135
Query: 151 ILSKLKESMQ--------SDTRQAVVWNTLGLILLKSGRLQSSISV--------LSSLLA 194
+S ++S++ + AV +N LG G+L+ +IS+ LS L
Sbjct: 1136 AISMYEKSLKIRLSVLDHNHPDVAVSYNNLGNAHRHQGKLEEAISMYEKSLKITLSVLDH 1195
Query: 195 VDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD-----LILKDQNHPAALINYAALLLCKYG 249
P+ N+G Y G E++ ++ L + D NHP ++Y
Sbjct: 1196 NHPHVAAIYNNMGAVYVDQGKHEEAISMYEKSLKITLSVLDHNHPHVAVSY--------- 1246
Query: 250 SVLAGAGANTGEGACLDQASAVNVAKECLLAALKA----DPKAAHIWANLANAYYLTGDH 305
+ + +N G+ A+++ K+ L P A + NL NAY G H
Sbjct: 1247 NNIRAVYSNQGK-----HEEAISMYKKSLKITSSVLGHNHPDVALSYNNLGNAYDKQGKH 1301
Query: 306 RSSGKCLEKAAKLEPNCMS 324
+ EK+ K+ + +S
Sbjct: 1302 EEAISMYEKSLKVTSSVLS 1320
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 140/350 (40%), Gaps = 76/350 (21%)
Query: 38 DADGDQSGLGTSSSSR---EEKVS----SLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQ 90
D G S +G S++ EE +S SLK L + P A ++ +G +Y+ G+
Sbjct: 527 DVAGSYSNMGAVYSNQGKYEEAISMNKKSLKIRLSVLGHNHPDVAASYNNMGEVYRHQGK 586
Query: 91 PLKAVSSYEKAEEILLRC----EADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPE 146
+A+S YEK+ +I L D+A +S +N +
Sbjct: 587 HEEAISMYEKSLKITLSVLGHNHPDVA-------------------ASYNNLGNTYFNQG 627
Query: 147 ELEEILSKLKESMQ--------SDTRQAVVWNTLGLILLKSGRLQSSISV--------LS 190
+ EE +S ++S++ + AV++N +G + L G+ + +IS+ LS
Sbjct: 628 KYEEAISMYEKSLKIRLSVLGHNHPDVAVLYNNMGAVNLDQGKYEEAISMYEKSLKITLS 687
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD-----LILKDQNHPAALINYAALLL 245
L P+ N+G AY G E++ ++ L + NHP
Sbjct: 688 VLGHNHPDVAASYNNMGEAYRYQGKHEEAISMYEKSLKITLSVLGHNHPD---------- 737
Query: 246 CKYGSVLAGAGANTG-----EGACLDQASAVNVAKECLLAALKAD-PKAAHIWANLANAY 299
+AG+ N G +G + S + + L+ L + P A + NL NAY
Sbjct: 738 ------IAGSYNNLGNAYRHQGKHEEAISMYEKSLKITLSVLGHNHPDVAGSYNNLGNAY 791
Query: 300 YLTGDHRSSGKCLEKAAKLEPNCMSTRY---AVAVSRIKDAERSQEPTEQ 346
G + + EK+ K+ + + + A + + + +A R Q E+
Sbjct: 792 SNQGKYEEAISMYEKSLKIRLSVLDHNHPDIAASYNNMGEAYRHQGKREE 841
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 150/371 (40%), Gaps = 76/371 (20%)
Query: 38 DADGDQSGLGTSSSSR---EEKVS----SLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQ 90
D G + +GT S++ EE +S SLK L + P A ++ +G +Y+ G+
Sbjct: 905 DVAGSYNNIGTVYSNQGKHEEAISMKKKSLKIRLSVLGHNHPDVAASYNNMGEVYRHQGK 964
Query: 91 PLKAVSSYEKAEEILL-------------------------RCEADIARPE---LLSLVQ 122
+A+S YEK+ +I L + E I+ E + L
Sbjct: 965 HEEAISMYEKSLKITLSVLGHNHPHVAASYNNLGNAYLDHGKHEEAISMYEKSLKIRLAV 1024
Query: 123 IHHAQCLLPESSGD-NSLDKELEPE-ELEEILSKLKESMQ--------SDTRQAVVWNTL 172
+ H P+ +G N+L + + EE +S ++S++ + A +N +
Sbjct: 1025 LGHNH---PDVAGSYNNLGNAYRHQGKHEEAISMYEKSLKITLSVLGHNHPDIAASYNNM 1081
Query: 173 GLILLKSGRLQSSISVLSSLLAV-----DPNNCDCIG---NLGIAYFQSGDMEQSAKCFQ 224
G + G+ + +IS+ L + D N+ D G NLG A+ G +E++ ++
Sbjct: 1082 GAVYSNQGKYEEAISMYEKSLKIRLSVLDHNHPDIAGSYNNLGNAHRHQGKLEEAISMYE 1141
Query: 225 D-----LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLL 279
L + D NHP ++Y L A+ +G + S + + L
Sbjct: 1142 KSLKIRLSVLDHNHPDVAVSYNNL-----------GNAHRHQGKLEEAISMYEKSLKITL 1190
Query: 280 AALKAD-PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY---AVAVSRIK 335
+ L + P A I+ N+ Y G H + EK+ K+ + + + AV+ + I+
Sbjct: 1191 SVLDHNHPHVAAIYNNMGAVYVDQGKHEEAISMYEKSLKITLSVLDHNHPHVAVSYNNIR 1250
Query: 336 DAERSQEPTEQ 346
+Q E+
Sbjct: 1251 AVYSNQGKHEE 1261
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 114/284 (40%), Gaps = 36/284 (12%)
Query: 53 REEKVS----SLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC 108
EE +S SLK L P A ++ +G +Y G+ +A+S Y+K+ +I L
Sbjct: 251 HEEAISMYEKSLKITLSIFGHNHPDVAVSYNNIGAVYSNQGKYEEAISMYKKSLKIRLSV 310
Query: 109 EADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVV 168
+S + L +S + ++ + + LE I+S L + D AV
Sbjct: 311 FGHNHPNAAVSYNNL--GTVYLDQSKHEEAIS--MYKKSLEIIISVLGHN-HPDV--AVS 363
Query: 169 WNTLGLILLKSGRLQSSISV--------LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSA 220
+N +G + G+ + +IS+ LS L P+ NLG AY G E++
Sbjct: 364 YNNMGAVYSNQGKHEEAISMYEKSLKIKLSVLGHNHPDITVSYNNLGNAYLDQGKYEEAI 423
Query: 221 KCFQD-----LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 275
++ L + D NHP ++Y + A +G + S +
Sbjct: 424 SMYEKSLKIRLSVLDHNHPDIAVSYNNM-----------GEAYRHQGKHEEAISMYEQSL 472
Query: 276 ECLLAALKAD-PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 318
+ L+ L + P A + NL NAY H + EK+ K+
Sbjct: 473 KIRLSVLGHNHPDVAMSYNNLGNAYRHQSKHEEAISMYEKSLKI 516
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 118/306 (38%), Gaps = 47/306 (15%)
Query: 38 DADGDQSGLGTSSSSR---EEKVS----SLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQ 90
D G + LG + S++ EE +S SLK L + P A ++ +G Y+ G+
Sbjct: 779 DVAGSYNNLGNAYSNQGKYEEAISMYEKSLKIRLSVLDHNHPDIAASYNNMGEAYRHQGK 838
Query: 91 PLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLD--KELEPEEL 148
+A+S YEK+ +I L L H +L + G LD K E +
Sbjct: 839 REEAISMYEKSLKIRLSV-----------LGHNHPDVAVLYNNMGAVYLDQGKHEEAISM 887
Query: 149 EEILSKLKESMQSDTRQAVV--WNTLGLILLKSGRLQSSISV--------LSSLLAVDPN 198
E K++ S+ V +N +G + G+ + +IS+ LS L P+
Sbjct: 888 HEKSLKIRLSVLGHNHPDVAGSYNNIGTVYSNQGKHEEAISMKKKSLKIRLSVLGHNHPD 947
Query: 199 NCDCIGNLGIAYFQSGDMEQSAKCFQD-----LILKDQNHPAALINYAALLLCKYGSVLA 253
N+G Y G E++ ++ L + NHP +Y L
Sbjct: 948 VAASYNNMGEVYRHQGKHEEAISMYEKSLKITLSVLGHNHPHVAASYNNL---------- 997
Query: 254 GAGANTGEGACLDQASAVNVAKECLLAALKAD-PKAAHIWANLANAYYLTGDHRSSGKCL 312
A G + S + + LA L + P A + NL NAY G H +
Sbjct: 998 -GNAYLDHGKHEEAISMYEKSLKIRLAVLGHNHPDVAGSYNNLGNAYRHQGKHEEAISMY 1056
Query: 313 EKAAKL 318
EK+ K+
Sbjct: 1057 EKSLKI 1062
>gi|313200841|ref|YP_004039499.1| hypothetical protein MPQ_1099 [Methylovorus sp. MP688]
gi|312440157|gb|ADQ84263.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus sp. MP688]
Length = 566
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 92/190 (48%), Gaps = 24/190 (12%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPEL-LSLVQIHHAQCLL 130
PK A HF LG++ LG+ +A++SY KA I L+ + +A L +L + + +
Sbjct: 77 PKIAEIHFNLGVVLGHLGRMDEAIASYRKA--ISLKPDLAVAYFNLGFALQTLGRYEEAI 134
Query: 131 P-------------ESSGDNSLDKELEPE-ELEEILSKLKESMQ--SDTRQAVVWNTLGL 174
P E+ G+ L L+ + ++E+ ++ +++++ +D R + L
Sbjct: 135 PSYRKAAAMQPTFYEAHGN--LGTVLQKQGKMEDAIASYRKALEIHADPRG---YFNLAT 189
Query: 175 ILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP 234
L G+L+ +++ S L + P+ D NLG A G+M+++ K +Q + D H
Sbjct: 190 ALRDHGQLEDAVTAYRSALRMQPDYVDAWNNLGEALRDQGNMDEAVKAYQHALSLDAAHA 249
Query: 235 AALINYAALL 244
AA N A L
Sbjct: 250 AANYNLAEFL 259
>gi|119510182|ref|ZP_01629320.1| hypothetical protein N9414_10368 [Nodularia spumigena CCY9414]
gi|119465132|gb|EAW46031.1| hypothetical protein N9414_10368 [Nodularia spumigena CCY9414]
Length = 304
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 68/176 (38%), Gaps = 21/176 (11%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
+ W GL +++GRLQ +I+ +DPN NLG+A Q+G ++ +A F
Sbjct: 43 STTWLNQGLQAIQAGRLQDAIAAFQQATQLDPNLATAHYNLGLALRQTGKLKPAADAFYQ 102
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 285
D A N LL EG+ L QAS + L A++ D
Sbjct: 103 ATQADPQFAPAFANLGGALL---------------EGSNLQQAS------DYLERAIELD 141
Query: 286 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ 341
PK NL D + +KA + N Y + S ++ + +Q
Sbjct: 142 PKLGFAHYNLGLVRQQQQDWERAIASFKKAMEYSKNAPEPPYHLGTSYLQQGKVNQ 197
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 66/177 (37%), Gaps = 21/177 (11%)
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
++ Q+D + A + LG LL+ LQ + L + +DP NLG+ Q
Sbjct: 100 FYQATQADPQFAPAFANLGGALLEGSNLQQASDYLERAIELDPKLGFAHYNLGLVRQQQQ 159
Query: 215 DMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 274
D E++ F+ + +N P + G Q VN A
Sbjct: 160 DWERAIASFKKAMEYSKNAPEPPYHL---------------------GTSYLQQGKVNQA 198
Query: 275 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 331
++ A+K +P+ NL ++ G + + K+A+ PN + Y +
Sbjct: 199 RDAFFQAIKNNPQYPEAHYNLGMIWFNQGQLKEALAAFRKSAEANPNYPNAYYGAGL 255
>gi|430747186|ref|YP_007206315.1| O-linked N-acetylglucosamine transferase, SPINDLY family
[Singulisphaera acidiphila DSM 18658]
gi|430018906|gb|AGA30620.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Singulisphaera acidiphila DSM 18658]
Length = 827
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 108/263 (41%), Gaps = 36/263 (13%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A AH LG++ ++ G+ +A+ + E+ I +PEL P
Sbjct: 137 PDLAEAHRHLGVLLRKQGKWGEAIVALEQVLRI---------KPEL-------------P 174
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
E+ D L E+ +LEE + + + +++ A ++ + ++L + GRL +I+
Sbjct: 175 ETLNDLGLLLEMT-GQLEEAVVRFQAAIRLRPEFAGAYSNMSVVLKQLGRLDEAITSGRE 233
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL------- 244
+ +DP NLG+ + G +++ CF + + D A N ++L
Sbjct: 234 AVRLDPGFAGAHNNLGVILEKEGGWDEATTCFHEALRLDPRFVEAYYNLGSVLSRLGRFE 293
Query: 245 ----LCKYGSVL--AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANA 298
+C+ L A A+ L + + A+ A++ P+ + NL +
Sbjct: 294 DAESICRQAITLDPDSAEAHHNLAFALSERGQLTEAETNYRRAIQLKPEFVDPYVNLTSV 353
Query: 299 YYLTGDHRSSGKCLEKAAKLEPN 321
G + C +A +L+PN
Sbjct: 354 LGKFGKLDEAEACSREAVRLDPN 376
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 71/174 (40%), Gaps = 13/174 (7%)
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
LG++L K G+ +I L +L + P + + +LG+ +G +E++ FQ I
Sbjct: 146 LGVLLRKQGKWGEAIVALEQVLRIKPELPETLNDLGLLLEMTGQLEEAVVRFQAAIRLRP 205
Query: 232 NHPAALINYAALL--LCKYGSVLAG-----------AGANTGEGACLDQASAVNVAKECL 278
A N + +L L + + AGA+ G L++ + A C
Sbjct: 206 EFAGAYSNMSVVLKQLGRLDEAITSGREAVRLDPGFAGAHNNLGVILEKEGGWDEATTCF 265
Query: 279 LAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 332
AL+ DP+ + NL + G + +A L+P+ + +A +
Sbjct: 266 HEALRLDPRFVEAYYNLGSVLSRLGRFEDAESICRQAITLDPDSAEAHHNLAFA 319
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
++ + +D W LG+ G L ++ L + P++ + +LGI + Q+G
Sbjct: 28 RQVLSADPSYIPAWYLLGVACHGLGNLTGALGAFQQTLRLQPDHAEAQNHLGIVWAQAGS 87
Query: 216 MEQSAKCFQDLILKDQNHPAALINYAAL 243
+E++ +CF +L Q P +L Y L
Sbjct: 88 LEEAVRCF---LLTLQLQPNSLDAYKNL 112
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 72/175 (41%), Gaps = 25/175 (14%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E + E+++ D R + LG +L + GR + + S+ + +DP++ + NL
Sbjct: 259 DEATTCFHEALRLDPRFVEAYYNLGSVLSRLGRFEDAESICRQAITLDPDSAEAHHNLAF 318
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL--LLCKYGSVLAGAGANTGEGACLD 266
A + G + ++ ++ I Q P + Y L +L K+G LD
Sbjct: 319 ALSERGQLTEAETNYRRAI---QLKPEFVDPYVNLTSVLGKFGK--------------LD 361
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
+A A C A++ DP + NL G + +A +++PN
Sbjct: 362 EAEA------CSREAVRLDPNRSEALVNLGFVLIEKGHIAEALAAYREAERVDPN 410
>gi|434391113|ref|YP_007126060.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
gi|428262954|gb|AFZ28900.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
Length = 231
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E+ EE ++ +++++ ++R A+ +N +G++ + GR Q +I+ L ++P + + +
Sbjct: 119 EKAEEAIAAYQQAIEHNSRYALAYNAIGMVRARQGRWQEAITEYQKALEINPEYGEALTH 178
Query: 206 LGIAYFQSGDMEQSAKCFQDL--ILKDQN 232
LG A++Q G +++ + I + QN
Sbjct: 179 LGQAFWQQGRRDEALASLEKALSIFRSQN 207
>gi|293607393|ref|ZP_06689732.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292814237|gb|EFF73379.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 623
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
L+E + ++ D +QA WN LG+IL + G+L++S+ L + A+ P++ NLG
Sbjct: 98 LDEAQEAARRAVALDPQQAEGWNNLGIILQEQGQLEASLQCLRRVAALLPDSPQAHNNLG 157
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL 245
Q GD Q+ + ++ + D ++ AL+N + L
Sbjct: 158 NTCKQLGDNAQALEHYRRALALDPDYAQALVNLSVALF 195
>gi|183221520|ref|YP_001839516.1| hypothetical protein LEPBI_I2138 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911604|ref|YP_001963159.1| hypothetical protein LBF_2084 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167776280|gb|ABZ94581.1| Conserved hypothetical protein containing tetratricopeptide repeat
(TPR) domains [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167779942|gb|ABZ98240.1| Putative TPR-repeat-containing protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
Length = 700
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 45/217 (20%)
Query: 46 LGTSSSSREE---------KVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVS 96
LGT RE+ +V LKTG +A A++ LGL+Y + P +A
Sbjct: 292 LGTIFYQREDYDRAEYYFREVIRLKTG----------DAKAYYNLGLVYLKKKVPEEAAK 341
Query: 97 SYEKAEEILLRCEADIARPE--------LLSLVQIHHA-----QCLLPESSGDNSL---- 139
++KA +A+ PE LS+ Q + A + LL + S +SL
Sbjct: 342 YFQKA------LDANANEPEVYRYIADAFLSMGQTNMAITALKKALLLKPSDVDSLFALA 395
Query: 140 ---DKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVD 196
K+ E E E + ++ DT + LG+IL + R SI+ L+++
Sbjct: 396 ELYYKKGELVEAESLFRRIIRLTPGDTYSETAYVNLGIILDEMERYSESIAAFEGALSLN 455
Query: 197 PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNH 233
P N NLG++Y +G + + + D NH
Sbjct: 456 PKNQSAYYNLGLSYLHAGKPTMAIESLRKSQALDPNH 492
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/182 (19%), Positives = 74/182 (40%), Gaps = 18/182 (9%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
EE ++++ ++ + V+ + L G+ +I+ L L + P++ D + L
Sbjct: 337 EEAAKYFQKALDANANEPEVYRYIADAFLSMGQTNMAITALKKALLLKPSDVDSLFALAE 396
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
Y++ G++ ++ F+ +I + Y L G LD+
Sbjct: 397 LYYKKGELVEAESLFRRIIRLTPGDTYSETAYVNL------------------GIILDEM 438
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 328
+ + AL +PK + NL +Y G + + L K+ L+PN + +R A
Sbjct: 439 ERYSESIAAFEGALSLNPKNQSAYYNLGLSYLHAGKPTMAIESLRKSQALDPNHVPSRLA 498
Query: 329 VA 330
+A
Sbjct: 499 IA 500
>gi|451982186|ref|ZP_21930513.1| exported hypothetical protein, contains TPR repeats [Nitrospina
gracilis 3/211]
gi|451760606|emb|CCQ91795.1| exported hypothetical protein, contains TPR repeats [Nitrospina
gracilis 3/211]
Length = 755
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 23/172 (13%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P+N + LG++Y +GQP KA+ +Y +A +R ++D P +L ++ P
Sbjct: 594 PENYRIYNQLGVIYSEIGQPDKAIHAYSEA----IRLKSDYFEPRF-NLGVLYDLLGRYP 648
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
++ L+ L +++ D + G +LL+ R + ++
Sbjct: 649 DA------------------LTSLDGALRVDAENPSAHFSRGWVLLQLKRYREAVWAFQQ 690
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL 243
DP+N D NLG+A+ + ++ F+ + D +H AL A L
Sbjct: 691 AARYDPSNADAHFNLGVAFAAAHRRGEARSAFRMALRIDPDHTGALTRLAEL 742
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 92/435 (21%), Positives = 161/435 (37%), Gaps = 119/435 (27%)
Query: 43 QSGLGTSS---SSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYE 99
Q GLG ++ EE + L L R P AHF LG Y + +A+ Y
Sbjct: 124 QFGLGYANLELKKYEEALEHLTNSL----RINPGMPRAHFALGRTYAETDRHTEAIPEYL 179
Query: 100 KAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEP-EELEEILSKLKES 158
A L L +H PE +L K +E + + +S+ K++
Sbjct: 180 IA----------------LELSPLH------PEWRF--ALAKSMEALSQFDSAISQYKQT 215
Query: 159 MQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQ 218
+ ++ A + +G I + +G+L+ ++ L + L +DP N + LG A + G +
Sbjct: 216 LDLNSNFADAYAAIGRIRVATGQLKKALEPLENALRIDPQNALALEYLGRALSRMGKHRE 275
Query: 219 SAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECL 278
+ F++L A + G L+ VN A+E
Sbjct: 276 AMLAFKELTFVQPQQ-------------------AKSHYQLGR-EYLELGQLVN-ARESF 314
Query: 279 LAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC--------MSTRYAVA 330
AL+ D NL ++L G+ LE ++E ++ ++ A
Sbjct: 315 ENALRFDSN------NLDIRFHL-------GQTLENLGQMEKAIVEYMRVLNLNPKHVRA 361
Query: 331 VSRIKDAERSQEPTEQLSWAGNEMASILR---EGDPVQIEPPIAWAGFAAVQKTHHEVAA 387
RI D QE + A E ++LR E PVQ+ ++A
Sbjct: 362 HHRIADLSLLQENYHR---AAEEFENVLRLDPENGPVQL-----------------KLAR 401
Query: 388 AFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYL 447
A+E EL++ ++ A + +L+ P + IW +L N +
Sbjct: 402 AYE----ELNRWQDAISAYQK------------------SLRFFPDSVEIWQSLGNTQWQ 439
Query: 448 TGDHRSSGKCLEKVL 462
G++R++ L + L
Sbjct: 440 LGNYRAAIVPLRETL 454
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 102/267 (38%), Gaps = 44/267 (16%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIAR-PELLSLVQIHHAQCLL 130
P+ A F LG++ RLG + E+ ++ E +AR P+ AQ +L
Sbjct: 492 PELPQADFGLGIILTRLG----------RHEQAVIHLERTVARNPDNFQ------AQAML 535
Query: 131 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
+S LE E E + L+ +M TR+ LG + Q ++
Sbjct: 536 GDSY--------LELERYAEAVPALRAAMGDVTRRQQTLLKLGSAYWHLRQYQMALKAYH 587
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL--LLCKY 248
+ +DP N LG+ Y + G +++ + + I ++ N L LL +Y
Sbjct: 588 QSVQLDPENYRIYNQLGVIYSEIGQPDKAIHAYSEAIRLKSDYFEPRFNLGVLYDLLGRY 647
Query: 249 GSVLA---GA--------GANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 297
L GA A+ G L Q A A + DP A NL
Sbjct: 648 PDALTSLDGALRVDAENPSAHFSRGWVLLQLKRYREAVWAFQQAARYDPSNADAHFNLGV 707
Query: 298 AY---YLTGDHRSSGKCLEKAAKLEPN 321
A+ + G+ RS+ + A +++P+
Sbjct: 708 AFAAAHRRGEARSAFRM---ALRIDPD 731
>gi|224135899|ref|XP_002327331.1| predicted protein [Populus trichocarpa]
gi|222835701|gb|EEE74136.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Query: 94 AVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILS 153
V ++ ++L+R E D++ EL ++ + L E G L ++ P + +L
Sbjct: 60 GVGTFFVIRQVLMRRELDLSAKELQAIRSGDASATGLFEL-GAVMLRRKFYPAATKYLLQ 118
Query: 154 KLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQS 213
+++ D A V+N LG+ + G+L I + + + P NLG AY +
Sbjct: 119 AIEKWDGEDQDLAQVYNALGVSYILDGKLDKGIKQFEAAVKLQPGYVTAWNNLGDAYEKK 178
Query: 214 GDMEQSAKCFQDLILKDQNHPAA 236
D++ + K F++++L D N+ A
Sbjct: 179 KDLKSALKAFEEVLLFDPNNKVA 201
>gi|356535232|ref|XP_003536152.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC-like [Glycine max]
Length = 988
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 108/264 (40%), Gaps = 38/264 (14%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A+ LG +Y+ LG P +A++ Y+ A + R +A L S+
Sbjct: 265 PSFPDAYLNLGNVYKALGMPQEAIACYQHALQT--RPNYGMAYGNLASIY---------- 312
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
E +L+ + K+++ D R +N LG L GR++ +I +
Sbjct: 313 -----------YEQGQLDMAILHYKQAVACDPRFLEAYNNLGNALKDVGRVEEAIQCYNQ 361
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALI-----NYA 241
L + PN+ + NLG Y + + +A+ ++ + L + A+I NY
Sbjct: 362 CLTLQPNHPQALTNLGNIYMEWNMVAAAAQYYKATLNVTTGLSAPYNNLAIIYKQQGNYV 421
Query: 242 ALLLCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 297
+ C Y VL A G + V+ A + + A+ P A ANLA+
Sbjct: 422 DAISC-YNEVLRIDPLAADGLVNRGNTYKEIGRVSDAIQDYIRAIVVRPTMAEAHANLAS 480
Query: 298 AYYLTGDHRSSGKCLEKAAKLEPN 321
AY +G ++ K ++A L P+
Sbjct: 481 AYKDSGHVEAAVKSYKQALILRPD 504
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 18/204 (8%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E ++ + ++Q+ + + L I + G+L +I +A DP + NLG
Sbjct: 285 QEAIACYQHALQTRPNYGMAYGNLASIYYEQGQLDMAILHYKQAVACDPRFLEAYNNLGN 344
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGA-------GANTGE 261
A G +E++ +C+ + NHP AL N + + ++ V A A TG
Sbjct: 345 ALKDVGRVEEAIQCYNQCLTLQPNHPQALTNLGNIYM-EWNMVAAAAQYYKATLNVTTGL 403
Query: 262 GACLD--------QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
A + Q + V+ A C L+ DP AA N N Y G + +
Sbjct: 404 SAPYNNLAIIYKQQGNYVD-AISCYNEVLRIDPLAADGLVNRGNTYKEIGRVSDAIQDYI 462
Query: 314 KAAKLEPNCMSTRYAVAVSRIKDA 337
+A + P M+ +A S KD+
Sbjct: 463 RAIVVRPT-MAEAHANLASAYKDS 485
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 74/175 (42%), Gaps = 21/175 (12%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
+ + ++K +E+++ + A + + + G + +I + + PN D N
Sbjct: 112 HDFDMCVAKNEEALRIEPHFAECYGNMANAWKEKGNIDLAIRYYLIAIELRPNFADAWSN 171
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
L AY + G + ++A+C + A IN ++ A +N G +
Sbjct: 172 LASAYMRKGRLTEAAQCCRQ---------ALAIN----------PLMVDAHSNLGN--LM 210
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
V A C L AL+ P A W+NLA + +GD + + ++A KL+P
Sbjct: 211 KAQGLVQEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDFNRALQYYKEAVKLKP 265
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 70/174 (40%), Gaps = 21/174 (12%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
++E S E+++ A+ W+ L + ++SG ++ + + P+ D NLG
Sbjct: 216 VQEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDFNRALQYYKEAVKLKPSFPDAYLNLG 275
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 267
Y G +++ C+Q + N+ A N A++ E LD
Sbjct: 276 NVYKALGMPQEAIACYQHALQTRPNYGMAYGNLASIYY---------------EQGQLDM 320
Query: 268 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
A+ K+ A+ DP+ + NL NA G + +C + L+PN
Sbjct: 321 --AILHYKQ----AVACDPRFLEAYNNLGNALKDVGRVEEAIQCYNQCLTLQPN 368
>gi|357441255|ref|XP_003590905.1| O-linked GlcNAc transferase like protein [Medicago truncatula]
gi|355479953|gb|AES61156.1| O-linked GlcNAc transferase like protein [Medicago truncatula]
Length = 986
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 108/262 (41%), Gaps = 38/262 (14%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A+ LG +Y+ LG P +A++ Y+ A + R +A L S IH+ Q
Sbjct: 263 PSFPDAYLNLGNVYKALGMPQEAIACYQHALQT--RPNYGMAYGNLAS---IHYEQ---- 313
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+L+ + K+++ D R +N LG L GR++ +I +
Sbjct: 314 --------------GQLDMAILHYKQAIACDPRFLEAYNNLGNALKDVGRVEEAIQCYNQ 359
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALI-----NYA 241
L++ PN+ + NLG Y + + +A ++ + L + A+I NYA
Sbjct: 360 CLSLQPNHPQALTNLGNIYMEWNMVAAAASYYKATLNVTTGLSAPYNNLAIIYKQQGNYA 419
Query: 242 ALLLCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 297
+ C Y VL A G + V+ A + + A+ P A ANLA+
Sbjct: 420 DAISC-YNEVLRIDPLAADGLVNRGNTYKEIGRVSDAIQDYIRAITVRPTMAEAHANLAS 478
Query: 298 AYYLTGDHRSSGKCLEKAAKLE 319
AY +G ++ K +A L
Sbjct: 479 AYKDSGHVEAAVKSYRQALILR 500
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 16/203 (7%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E ++ + ++Q+ + + L I + G+L +I +A DP + NLG
Sbjct: 283 QEAIACYQHALQTRPNYGMAYGNLASIHYEQGQLDMAILHYKQAIACDPRFLEAYNNLGN 342
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGA-------GANTGE 261
A G +E++ +C+ + NHP AL N + + ++ V A A TG
Sbjct: 343 ALKDVGRVEEAIQCYNQCLSLQPNHPQALTNLGNIYM-EWNMVAAAASYYKATLNVTTGL 401
Query: 262 GACLDQASAV-----NVAK--ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 314
A + + + N A C L+ DP AA N N Y G + + +
Sbjct: 402 SAPYNNLAIIYKQQGNYADAISCYNEVLRIDPLAADGLVNRGNTYKEIGRVSDAIQDYIR 461
Query: 315 AAKLEPNCMSTRYAVAVSRIKDA 337
A + P M+ +A S KD+
Sbjct: 462 AITVRPT-MAEAHANLASAYKDS 483
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 74/175 (42%), Gaps = 21/175 (12%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
+ + ++K +E+++ + A + + + G + +I + + PN D N
Sbjct: 110 HDFDMCVAKNEEALRIEPHFAECYGNMANAWKEKGNIDLAIRYYLIAIELRPNFADAWSN 169
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
L AY + G + ++A+C + A IN ++ A +N G +
Sbjct: 170 LASAYMRKGRLTEAAQCCRQ---------ALAIN----------PLMVDAHSNLGN--LM 208
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
V A C L AL+ P A W+NLA + +GD + + ++A KL+P
Sbjct: 209 KAQGLVQEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDFNRALQYYKEAVKLKP 263
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 68/174 (39%), Gaps = 21/174 (12%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
++E S E+++ A+ W+ L + ++SG ++ + + P+ D NLG
Sbjct: 214 VQEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDFNRALQYYKEAVKLKPSFPDAYLNLG 273
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 267
Y G +++ C+Q + Q P YG + E LD
Sbjct: 274 NVYKALGMPQEAIACYQHAL---QTRP------------NYGMAYGNLASIHYEQGQLDM 318
Query: 268 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
A+ K+ A+ DP+ + NL NA G + +C + L+PN
Sbjct: 319 --AILHYKQ----AIACDPRFLEAYNNLGNALKDVGRVEEAIQCYNQCLSLQPN 366
>gi|154707419|ref|YP_001424860.1| tetratricopeptide repeat family protein [Coxiella burnetii Dugway
5J108-111]
gi|154356705|gb|ABS78167.1| tetratricopeptide repeat family protein [Coxiella burnetii Dugway
5J108-111]
Length = 561
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 90/223 (40%), Gaps = 31/223 (13%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
+E E + +++LK ++ + + ++ L + + G +I+ LA++P N D
Sbjct: 149 IELENYHQAIAELKRTVAMSSHHSAAFSQLAHVYMYLGDFSKAITYYEKRLALEPENADA 208
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 262
+ G+A+ + +++ F + +L + HP C Y LA A G+
Sbjct: 209 QYDCGLAHLKDNQFQKAIDHFTNALLLNPEHPD----------CHYS--LATAYLQRGDH 256
Query: 263 ACLDQASAVNVAKECLLAALKADPKAAHI--WANLANAYYLTGDHRSSGKCLEKAAKLEP 320
KE LL L+ K I + N+ + HR + ++A L+P
Sbjct: 257 ------------KEALLHYLRQLEKKPQIECYYNVGVLHMYQERHREAIDYFKQALTLDP 304
Query: 321 NCMSTRYAVA-----VSRIKDAERSQEPTEQLSWAGNEMASIL 358
N +A +++IK A E T L +E+ IL
Sbjct: 305 NYREAHLNIAAVYLKINQIKQAIEHYESTLVLKPNDSEIEHIL 347
>gi|428305223|ref|YP_007142048.1| hypothetical protein Cri9333_1649 [Crinalium epipsammum PCC 9333]
gi|428246758|gb|AFZ12538.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
epipsammum PCC 9333]
Length = 832
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 68/172 (39%), Gaps = 21/172 (12%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E L ++++ Q VWN G++L+ GR Q +I+ L V P+ + N GI
Sbjct: 647 QEALIAFDQTLKVKPDQYEVWNNKGIVLVNLGRYQEAITAFDQTLKVKPDQYEVWNNKGI 706
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
A + G +++ F D LK + + N + L G A DQ
Sbjct: 707 ALGKLGRYQEALAAF-DQTLKVKPDQYEVWNNKGIALVNLGRYQEAITA-------FDQ- 757
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
LK P I+ N A Y L G+ + L++A L+P
Sbjct: 758 ------------TLKVKPDDDKIFYNKACCYALQGNVEQAINNLQQAINLDP 797
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 69/193 (35%), Gaps = 15/193 (7%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E L+ ++++ Q VW G++L+ G Q ++ L V PN+ + N GI
Sbjct: 579 QEALAAFDQALKVKPDQHQVWKNKGIVLVNLGCYQEALVAFDQALKVKPNDHEPWSNKGI 638
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGAN---------- 258
G +++ F D LK + + N ++L G A
Sbjct: 639 VLVNLGRYQEALIAF-DQTLKVKPDQYEVWNNKGIVLVNLGRYQEAITAFDQTLKVKPDQ 697
Query: 259 ----TGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 314
+G L + A LK P +W N A G ++ + ++
Sbjct: 698 YEVWNNKGIALGKLGRYQEALAAFDQTLKVKPDQYEVWNNKGIALVNLGRYQEAITAFDQ 757
Query: 315 AAKLEPNCMSTRY 327
K++P+ Y
Sbjct: 758 TLKVKPDDDKIFY 770
>gi|170575722|ref|XP_001893358.1| TPR Domain containing protein [Brugia malayi]
gi|158600696|gb|EDP37806.1| TPR Domain containing protein [Brugia malayi]
Length = 247
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 140 DKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNN 199
D+ LE E+L L+++++ A W LGL L R + + + L++
Sbjct: 71 DRNLEAEQL------LRKAIKIRPNFAAAWMNLGLAQLAQKRYKDAENSFEQALSLRFPY 124
Query: 200 CDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--------------- 244
DC+ N+G+ Y Q + + +Q++ + +H A +N LL
Sbjct: 125 PDCLYNMGLLYLQQNQKTYAREIWQNITRANPSHKQAWLNLLVLLDETNNCAEVISLADK 184
Query: 245 LCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 299
+ KY S A + G C + + A++ LL+A++ +P A W N+ +
Sbjct: 185 VLKYHS--KDASILSQLGTCYGKLGQYDSAEKFLLSAVELEPTAITYWKNIGRWF 237
>gi|357441257|ref|XP_003590906.1| O-linked GlcNAc transferase like protein [Medicago truncatula]
gi|355479954|gb|AES61157.1| O-linked GlcNAc transferase like protein [Medicago truncatula]
Length = 744
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 108/262 (41%), Gaps = 38/262 (14%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A+ LG +Y+ LG P +A++ Y+ A + R +A L S IH+ Q
Sbjct: 21 PSFPDAYLNLGNVYKALGMPQEAIACYQHALQT--RPNYGMAYGNLAS---IHYEQ---- 71
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+L+ + K+++ D R +N LG L GR++ +I +
Sbjct: 72 --------------GQLDMAILHYKQAIACDPRFLEAYNNLGNALKDVGRVEEAIQCYNQ 117
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALI-----NYA 241
L++ PN+ + NLG Y + + +A ++ + L + A+I NYA
Sbjct: 118 CLSLQPNHPQALTNLGNIYMEWNMVAAAASYYKATLNVTTGLSAPYNNLAIIYKQQGNYA 177
Query: 242 ALLLCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 297
+ C Y VL A G + V+ A + + A+ P A ANLA+
Sbjct: 178 DAISC-YNEVLRIDPLAADGLVNRGNTYKEIGRVSDAIQDYIRAITVRPTMAEAHANLAS 236
Query: 298 AYYLTGDHRSSGKCLEKAAKLE 319
AY +G ++ K +A L
Sbjct: 237 AYKDSGHVEAAVKSYRQALILR 258
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 16/203 (7%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E ++ + ++Q+ + + L I + G+L +I +A DP + NLG
Sbjct: 41 QEAIACYQHALQTRPNYGMAYGNLASIHYEQGQLDMAILHYKQAIACDPRFLEAYNNLGN 100
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGA-------GANTGE 261
A G +E++ +C+ + NHP AL N + + ++ V A A TG
Sbjct: 101 ALKDVGRVEEAIQCYNQCLSLQPNHPQALTNLGNIYM-EWNMVAAAASYYKATLNVTTGL 159
Query: 262 GACLDQASAV-----NVAK--ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 314
A + + + N A C L+ DP AA N N Y G + + +
Sbjct: 160 SAPYNNLAIIYKQQGNYADAISCYNEVLRIDPLAADGLVNRGNTYKEIGRVSDAIQDYIR 219
Query: 315 AAKLEPNCMSTRYAVAVSRIKDA 337
A + P M+ +A S KD+
Sbjct: 220 AITVRPT-MAEAHANLASAYKDS 241
>gi|390440286|ref|ZP_10228629.1| Similar to tr|Q4BXF8|Q4BXF8_CROWT Glycosyl transferase [Microcystis
sp. T1-4]
gi|389836296|emb|CCI32755.1| Similar to tr|Q4BXF8|Q4BXF8_CROWT Glycosyl transferase [Microcystis
sp. T1-4]
Length = 403
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
E E E LS +++++ D A + LGL+L + RL SI L ++P+N
Sbjct: 289 EAENYEAALSVFEKTVEIDPSYADGYYNLGLVLKQLHRLPESIKAYKKALKLNPDNPAIY 348
Query: 204 GNLGIAYFQSGDMEQSAKCFQD--LILKDQ 231
NLG+AY G+ ++ K +Q +LKDQ
Sbjct: 349 QNLGVAYITFGNYNEAIKIWQKGLQLLKDQ 378
>gi|293651727|pdb|2WQH|A Chain A, Crystal Structure Of Ctpr3y3
Length = 125
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 22/134 (16%)
Query: 194 AVDP-NNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVL 252
A+DP N+ + NLG AY++ GD +++ + +Q + N+ A N L
Sbjct: 2 AMDPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAWYN------------L 49
Query: 253 AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 312
A G+ + A E AL+ P A W NL NAYY GD+ + +
Sbjct: 50 GNAYYKQGD---------YDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYY 100
Query: 313 EKAAKLEPNCMSTR 326
+KA +L PN +
Sbjct: 101 QKALELYPNNAEAK 114
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 38/78 (48%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+ +E + +++++ A W LG K G +I L + PNN + NL
Sbjct: 24 DYDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAWYNL 83
Query: 207 GIAYFQSGDMEQSAKCFQ 224
G AY++ GD +++ + +Q
Sbjct: 84 GNAYYKQGDYDEAIEYYQ 101
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 224
A W LG K G +I L + PNN + NLG AY++ GD +++ + +Q
Sbjct: 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQ 67
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%)
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 335
E AL+ P A W NL NAYY GD+ + + +KA +L PN Y + + K
Sbjct: 30 EYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAWYNLGNAYYK 89
Query: 336 DAERSQ 341
+ +
Sbjct: 90 QGDYDE 95
>gi|239946448|ref|ZP_04698204.1| tetratricopeptide TPR_2 [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239920724|gb|EER20751.1| tetratricopeptide TPR_2 [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 375
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 73/185 (39%), Gaps = 21/185 (11%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
EE + + ++++ + G+ L G + SI + + P++ D N G
Sbjct: 131 YEEAIKEYNKAIKLKPDYVESYYNKGISLYNIGEYEESIIAYEKAIELKPDDADIYNNKG 190
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 267
+ F G E++ K + I + N A +IN +G L
Sbjct: 191 TSLFNLGQYEEAIKAYNKAIELNPND-AVVIN--------------------NKGTSLSD 229
Query: 268 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 327
A +C A++ +P A + N N++Y G + + K KA KL+P+ + + Y
Sbjct: 230 LEKYEEAIKCYNQAIELNPNDACSYYNKGNSFYKLGKYEEAIKEYNKAIKLKPDYVESYY 289
Query: 328 AVAVS 332
+S
Sbjct: 290 NKGIS 294
>gi|294495566|ref|YP_003542059.1| hypothetical protein Mmah_0891 [Methanohalophilus mahii DSM 5219]
gi|292666565|gb|ADE36414.1| TPR repeat-containing protein [Methanohalophilus mahii DSM 5219]
Length = 1022
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 104/276 (37%), Gaps = 47/276 (17%)
Query: 55 EKVSSLKTGLV---HVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEAD 111
+K L+T L V K P N A + GL+Y +LG A ++Y+K L E
Sbjct: 696 QKAGDLQTALYAYGRVVEKDPNNGDALYNRGLIYDKLGSFRNAANAYQK----YLNLEPK 751
Query: 112 IARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNT 171
L H A+ + N++ + +P + + ++SD
Sbjct: 752 DMDTWYLLAQSAHKARMYDVSLNAINTVIND-QPSNQDALY------LKSDN-------- 796
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
L K GR +I V +L DP N D + N G+A+ G +++ +C++ L+ +
Sbjct: 797 ----LEKMGRFSDAIVVYDEILESDPQNQDALFNKGLAFENIGQYQKAIECYEQLLDVNP 852
Query: 232 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 291
H A+ +G L N A L+ +P A
Sbjct: 853 QHVTAM---------------------EHKGFDLYLLGEYNKADVVYNQILEIEPNNADA 891
Query: 292 WANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 327
+ A YL + S ++ +++PNC++ Y
Sbjct: 892 LYHKATIKYLLSSYAGSIMYYDRLLEVKPNCITAWY 927
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 158 SMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDME 217
S+ SD+ Q +W+ ++ K+G LQ+++ ++ DPNN D + N G+ Y + G
Sbjct: 679 SVNSDSVQ--LWHKYAIVSQKAGDLQTALYAYGRVVEKDPNNGDALYNRGLIYDKLGSFR 736
Query: 218 QSAKCFQDLI 227
+A +Q +
Sbjct: 737 NAANAYQKYL 746
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 90/437 (20%), Positives = 159/437 (36%), Gaps = 66/437 (15%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEAD-----IARPELLSL-VQIHH 125
P + +A ++ GL ++L KA+ YEKA L E + P+L +L V
Sbjct: 86 PNSTYALYMAGLSLEKLASENKAIQYYEKALRNLKDTENQNITELVNNPDLETLPVLFLK 145
Query: 126 AQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSS 185
+ E + ++SL + + LS + ++N GL G + +
Sbjct: 146 GKISHLEGNYNDSLTYQ------DAALSAYGYHSED------LYNK-GLYHKNEGNHEDA 192
Query: 186 ISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYA---- 241
I + L ++P+ D LG Y G+ + + + + + N L+ Y
Sbjct: 193 IEHFQAALRINPSKTDSWAQLGECYEAIGEYQTAQDNYDKALQRKPNDSELLLKYGLVAE 252
Query: 242 -----ALLLCKYGSVLAGAGANTG----EGACLDQASAVNVAKECLLAALKADPKAAHIW 292
+L + Y VL N + L+ N A C ALK DP+ +W
Sbjct: 253 KMDDHSLAIEYYDRVLEIQPYNVDSWKYKARSLEALDQNNYALTCYNQALKYDPENKALW 312
Query: 293 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDA--------------E 338
G + S +C ++A KL P+ +A + R+ +A E
Sbjct: 313 NLKGQLLDKMGRYEESIECYDQALKLNPD-----HARGIGRVSEAPSIIISADSHEVFYE 367
Query: 339 RSQEPTEQLSWAGNEMASILR----------EGDPVQIEP-PIAWAGFAAVQKTHHEVAA 387
Q +E N+ + R D ++ EP + W A + K + + +
Sbjct: 368 TPQFDSEAAQTLFNKGEAFYRLEKYDDALECYNDVIETEPHAVVWYRKATILKNNGDFSE 427
Query: 388 AFETEENELSKMEECAGA---GESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANA 444
A ++ E L +E A A ++ LD+ A + A + D W +A
Sbjct: 428 AIDSYEEALD-IESDAPAVWYEQAVLLDRIGEYRKAVKSYDEATERDENYTLAWYEMAVD 486
Query: 445 YYLTGDHRSSGKCLEKV 461
+ G + S +KV
Sbjct: 487 LKILGKYDQSLAAYDKV 503
>gi|397781371|ref|YP_006545844.1| TPR repeat-containing protein [Methanoculleus bourgensis MS2]
gi|396939873|emb|CCJ37128.1| TPR repeat-containing protein MJ1345 [Methanoculleus bourgensis
MS2]
Length = 184
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
W + LL++G ++S+L+ L ++P + D N G + G E++ +C+ D +L
Sbjct: 11 WLNEAVTLLENGDYSGALSILNKSLELNPMSADAWNNKGFVLDELGRSEEALQCY-DQVL 69
Query: 229 KDQNHPAALINYAALLLCK----------YGSVLA----GAGANTGEGACLDQASAVNVA 274
K + A N L LC Y VL A A GA LD+ A
Sbjct: 70 KLRPDDAGAWNSRGLALCALDRFEEALQCYDQVLELRPDDADAWNNMGAVLDELDRFEEA 129
Query: 275 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 318
+C LK DP W N + G + +C +A +L
Sbjct: 130 LQCYDRVLKLDPDDMAAWHNKSVTLDKLGRSEEAARCYSRALEL 173
>gi|226944845|ref|YP_002799918.1| glycosyl transferase family protein [Azotobacter vinelandii DJ]
gi|226719772|gb|ACO78943.1| glycosyl transferase,TPR repeat protein [Azotobacter vinelandii DJ]
Length = 1221
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 167 VVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 219
+ W GL LL+S R Q +I VL +DP + D + NLGIAY + G+++++
Sbjct: 28 LAWKVWGLALLESRRPQQAIEVLHRADGIDPEDPDTLHNLGIAYLKQGNIQKA 80
>gi|22165103|gb|AAM93720.1| putative stress inducible protein [Oryza sativa Japonica Group]
Length = 380
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 63/135 (46%)
Query: 102 EEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQS 161
++L+R E D++ EL V+ A G L ++ P ++ + +++ +
Sbjct: 222 RQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAAIKYLQQAIQKWDRD 281
Query: 162 DTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 221
+ A V+N LG+ + +L SI + + P NLG AY Q D++ + K
Sbjct: 282 EQDLAQVYNALGVSYKRDNKLDKSIQQFEKAVELQPGYVTAWNNLGDAYEQKKDLKSALK 341
Query: 222 CFQDLILKDQNHPAA 236
F++++L D N+ A
Sbjct: 342 AFEEVLLFDPNNTVA 356
>gi|78708787|gb|ABB47762.1| tetratricopeptide repeat, putative, expressed [Oryza sativa
Japonica Group]
Length = 381
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 63/135 (46%)
Query: 102 EEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQS 161
++L+R E D++ EL V+ A G L ++ P ++ + +++ +
Sbjct: 223 RQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAAIKYLQQAIQKWDRD 282
Query: 162 DTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 221
+ A V+N LG+ + +L SI + + P NLG AY Q D++ + K
Sbjct: 283 EQDLAQVYNALGVSYKRDNKLDKSIQQFEKAVELQPGYVTAWNNLGDAYEQKKDLKSALK 342
Query: 222 CFQDLILKDQNHPAA 236
F++++L D N+ A
Sbjct: 343 AFEEVLLFDPNNTVA 357
>gi|330995749|ref|ZP_08319646.1| tetratricopeptide repeat protein [Paraprevotella xylaniphila YIT
11841]
gi|329574479|gb|EGG56044.1| tetratricopeptide repeat protein [Paraprevotella xylaniphila YIT
11841]
Length = 491
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 23/172 (13%)
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
L+ S R + +I +L+SLL ++P N + +LG AYF D ++ + + D++
Sbjct: 180 LISSNRPKEAIEILNSLLDINPYNLNAWHSLGEAYFVCEDFSKTMETADFALAIDEHDAQ 239
Query: 236 ALINYAALLLCK---------YGSVLAGAGANT----GEGACLDQASAVNVAKECLLAAL 282
AL+ A LL + Y +N +G CL SA+ E L L
Sbjct: 240 ALLLKANSLLQQQNLDEAHQLYLRYFKEHPSNEIPYLFDGVCL---SALERYDEALSQLL 296
Query: 283 KAD-------PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 327
KA+ P+ HI+ANL++ Y D + + ++K ++ P+ + Y
Sbjct: 297 KAEELSQGYSPEQQHIYANLSDVYSKLYDTDKAFEYIDKIKEINPDYDTDLY 348
>gi|91201196|emb|CAJ74256.1| hypothetical protein kuste3493 [Candidatus Kuenenia
stuttgartiensis]
Length = 234
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 84/225 (37%), Gaps = 36/225 (16%)
Query: 113 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 172
A PE V+ H+ +L + G EE + +++++D +N L
Sbjct: 42 ANPEF---VEAHYNLGVLYDEKG-----------MTEEAIGAYIKTIETDANFVKAYNNL 87
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
+I K + +I + +A+ P + + NLGI Y++ ++ K F+D + ++
Sbjct: 88 SVIYYKLKQTDKAIETIKKAIAISPKYSEALYNLGIYYYEKTQYNEAIKAFKDAVKRNTR 147
Query: 233 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 292
N G A A A + +N PK +
Sbjct: 148 FDMGFYN--------LGVAYAAIDATDESIAAFKRVIELN-------------PKYPDAY 186
Query: 293 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA-VSRIKD 336
NL AY + + L+KA ++ P T +A+ + +KD
Sbjct: 187 YNLGVAYSKKNQFDEAIQLLKKALEINPKDSKTHFALGIIYTVKD 231
>gi|422303532|ref|ZP_16390883.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
gi|389791492|emb|CCI12702.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
Length = 403
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
E E E LS +++++ D+R A + LGL+ + RL SI L ++P+N
Sbjct: 289 EAENYETALSIFEKTVEIDSRYADGYYNLGLVFKQLHRLPESIKAYKKALKLNPDNPAIY 348
Query: 204 GNLGIAYFQSGDMEQSAKCFQD--LILKDQ 231
NLG+AY G ++ + +Q +LKDQ
Sbjct: 349 QNLGVAYIAFGSYNEAIEIWQKGLKLLKDQ 378
>gi|242278108|ref|YP_002990237.1| hypothetical protein Desal_0632 [Desulfovibrio salexigens DSM 2638]
gi|242121002|gb|ACS78698.1| TPR repeat-containing protein [Desulfovibrio salexigens DSM 2638]
Length = 158
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
E+ + + K+ ++S +W LG + + + +I S LA++P+N + +LG
Sbjct: 22 FEQQIEETKKLLESQPDSVNLWTKLGNLYFDTDQYAKAIDAYSKSLAIEPDNAHVLTDLG 81
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLC----KYGSVLAGAG 256
+ Y +SG+ +++ + F IL H A +N +L K G++ A G
Sbjct: 82 VMYRRSGNPQKAVENFDKAILAAPKHETARLNKGIVLYYDLKDKAGAIQAWNG 134
>gi|325106717|ref|YP_004267785.1| methyltransferase type 11 [Planctomyces brasiliensis DSM 5305]
gi|324966985|gb|ADY57763.1| Methyltransferase type 11 [Planctomyces brasiliensis DSM 5305]
Length = 1391
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 103/253 (40%), Gaps = 47/253 (18%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P +A A LLG++ + G+ L AV E+A + L+ +A + R L S +
Sbjct: 39 PNHAQALHLLGVIDHQRGEHLAAVEKIERA--LKLKPDAVLFRKNLASAAR--------- 87
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
S+G +LE+ + + ++ + V++ LG I + +
Sbjct: 88 -SAG-----------QLEKARKSCENVLAAEPNEPVMFTLLGRICETEEKWTEAARHYEE 135
Query: 192 LLAVDPNNCDCIG---NLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 248
L + NN + + +LG Y + G + +C++D+I +D H A+ N A L ++
Sbjct: 136 SLRIGLNNSETLETLLHLGDCYSKVGRSTDAERCYRDIIDRDPWHLFAVHNLAREL--QF 193
Query: 249 GSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSS 308
LA A + L DP A W NL Y G+ +
Sbjct: 194 AGKLAAA-------------------ESFYEQTLDIDPNCASAWNNLGVVYQTRGNFSEA 234
Query: 309 GKCLEKAAKLEPN 321
+C+EKA +L P+
Sbjct: 235 RRCMEKARQLLPS 247
>gi|149183670|ref|ZP_01862084.1| TPR domain protein [Bacillus sp. SG-1]
gi|148848618|gb|EDL62854.1| TPR domain protein [Bacillus sp. SG-1]
Length = 221
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 14/201 (6%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
L+ ++EE + E+++ + V + G +LL G + + L +++D
Sbjct: 11 LQEGKVEEAVKFFTEAIEENPTDPVAYINFGNVLLSVGENEKAEKFLKRAISLDGEAASA 70
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKD-QNHPA------ALINYA----ALLLCKYGSV 251
+LG YF + + + + + F+ I K +N +L+N AL
Sbjct: 71 YYSLGNLYFNAENFDAAKEAFETAIKKGLENEDVFFMLGISLVNLELPKLALPYLMRSVE 130
Query: 252 LAG--AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY-LTGDHRSS 308
L G A A G CL + A A E L ++ DP+ A + NL AY T D +
Sbjct: 131 LNGEDAEARFQYGLCLAKTEAYKEAIEQLEIVVEQDPEHADAYYNLGVAYAGFTDDADKA 190
Query: 309 GKCLEKAAKLEPNCMSTRYAV 329
C EKA +++P+ M Y +
Sbjct: 191 RSCFEKALEIQPDHMLAGYGL 211
>gi|399021040|ref|ZP_10723160.1| Tfp pilus assembly protein PilF [Herbaspirillum sp. CF444]
gi|398093271|gb|EJL83658.1| Tfp pilus assembly protein PilF [Herbaspirillum sp. CF444]
Length = 702
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
WN LG+IL +SG+ +S+ L +++++P+N + NL Y + G EQ+ C++ +
Sbjct: 119 WNNLGIILQESGKFDASLECLQRVVSLEPDNPEPYNNLANTYKRLGQFEQAQDCYRRALA 178
Query: 229 KDQNHPAALINYAALL--LCKYGSVLAGA 255
++ N A LL L ++ +A A
Sbjct: 179 LRPDYAEVHSNLAFLLNDLGRFDEAVASA 207
>gi|88603649|ref|YP_503827.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
gi|88189111|gb|ABD42108.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
Length = 436
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 99/247 (40%), Gaps = 36/247 (14%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A LLG Y+ L Q +A+ +YE+A E+ D + + A L
Sbjct: 223 PDYTAAWLLLGNSYKVLNQFDEAIDAYEEAMEL------DPGSTKYRKYI----ADVYL- 271
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
G +L KE +P+E E K +++ W + G+ K G +++ +
Sbjct: 272 -VMGKEALYKEGKPQEAIEYFDK---TIRMIANHITAWFSKGVAYKKLGAYRNATACFLK 327
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 251
++ +DP N + ++G+ E++ +C+ + I D +H A+ K G++
Sbjct: 328 VVEMDPQNGHAYYEMAQILEKTGNNEEAIRCYLETIRCDPSHTDAMY--------KVGNL 379
Query: 252 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 311
L G A D+ L P+++ W A G + + +C
Sbjct: 380 LMEGGDYKNAIAYFDR-------------VLDKIPESSVAWFAKGKALQRRGQQKDADRC 426
Query: 312 LEKAAKL 318
E+A+KL
Sbjct: 427 FERASKL 433
>gi|320536427|ref|ZP_08036464.1| tetratricopeptide repeat protein, partial [Treponema phagedenis
F0421]
gi|320146737|gb|EFW38316.1| tetratricopeptide repeat protein [Treponema phagedenis F0421]
Length = 865
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 87/193 (45%), Gaps = 21/193 (10%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
L E+ ++ LS K+ + + A V N LG + + G+L S+++L + L + N
Sbjct: 55 LRSEQFQKALSVYKKLQMQNAQDADVLNNLGTVYRRLGKLPESVAILKTALKLGKNRETV 114
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 262
+ NLG Y + +++A CF+ ++ + +P ++ Y L G++ A
Sbjct: 115 LYNLGNTYKEGEVYDRAADCFKQVL---ELNPNDVLAYNHL-----GTIQA--------- 157
Query: 263 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
L++ + +A E L DP + NLAN +Y G ++ + +A K P
Sbjct: 158 --LEKKTE--LAIETYYKGLLLDPNHPFLHFNLANIFYKQGKLTAALESYLEAVKTMPGF 213
Query: 323 MSTRYAVAVSRIK 335
+ + +A +K
Sbjct: 214 IEAQKNIADIYLK 226
>gi|345871985|ref|ZP_08823926.1| Tetratricopeptide TPR_2 repeat-containing protein [Thiorhodococcus
drewsii AZ1]
gi|343919796|gb|EGV30539.1| Tetratricopeptide TPR_2 repeat-containing protein [Thiorhodococcus
drewsii AZ1]
Length = 2237
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 79/211 (37%), Gaps = 27/211 (12%)
Query: 170 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 229
N LG L GRL ++ +L +DP N+G A G +++ C+ +L
Sbjct: 1642 NALGSALQHLGRLSEALGCFQRVLDIDPRFVLAYANMGAALSDLGRFDEALNCYDQALLI 1701
Query: 230 DQNHPAALINYAALL--LCKYGSVLAG-----------AGANTGEGACLDQASAVNVAKE 276
+Q+ N + L + ++ LA A G L A
Sbjct: 1702 NQDSAEVHANRSLTLYRMGRFEDALASFDHLLNIRPDDVDALNKRGILLQNCGRFREALA 1761
Query: 277 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST--------RYA 328
AAL P++A N N + GD ++ C +A ++PN + Y
Sbjct: 1762 SFDAALVVKPESADALTNRGNVFKDQGDLETASSCYRQAMGIQPNLIEAWHNRLLCLNYQ 1821
Query: 329 VAVSRIKDAERSQEPTEQLSWAGNEMASILR 359
AVS R Q E LS+ ++ +S+ R
Sbjct: 1822 DAVS------RDQVYAEHLSFDRHQASSVFR 1846
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 86/225 (38%), Gaps = 33/225 (14%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
W LG IL+K R +++I L + + P + I NLG A E++ CF+ I
Sbjct: 897 WKALGTILVKIERNEAAIPYLLEAIRLCPEEDESIHNLGYALLNLSRFEEAIGCFKRAIE 956
Query: 229 KDQNHPAALIN----------YAALLLCKYGSVLAGAGANT----GEGACLDQASAVNVA 274
+ ++ A IN + + C Y L N G LD+ + A
Sbjct: 957 INPDYVEAHINLGTSYKDTNRFDEAMKC-YDKALDLNPENPEVHCNRGVALDELGRLGEA 1015
Query: 275 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN----------CMS 324
+ + AL+ P NL N Y G + C KA + +P+ C++
Sbjct: 1016 VDSQIRALELLPIYPQAHNNLGNVYKNIGLLDDAVSCYRKALESQPDLKAAYSNLLLCLN 1075
Query: 325 TRYAVAVSRIKDAERSQE--------PTEQLSWAGNEMASILREG 361
+++ +RI ++ E P LS + +LR G
Sbjct: 1076 YDSSISPARIFAEHQAFEQQLASQVVPLPPLSTRNKDPGRVLRLG 1120
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 8/109 (7%)
Query: 164 RQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 223
R W LG L+K R + ++ L + + P + +CI LG A G + ++ CF
Sbjct: 1602 RAMFGWKILGTTLVKLNRHEDALPHLLAANRLAPGDAECINALGSALQHLGRLSEALGCF 1661
Query: 224 QDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVN 272
Q ++ D P ++ YA + G+ L+ G C DQA +N
Sbjct: 1662 QRVLDID---PRFVLAYANM-----GAALSDLGRFDEALNCYDQALLIN 1702
>gi|268315734|ref|YP_003289453.1| hypothetical protein Rmar_0157 [Rhodothermus marinus DSM 4252]
gi|262333268|gb|ACY47065.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252]
Length = 465
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 71/185 (38%), Gaps = 21/185 (11%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
EE L + ++Q D ++ LG+ L + RL+ ++ L ++P++ + LG
Sbjct: 122 FEEALQAYERALQIDPLNDEIYYNLGITLERMDRLEEAVQALEEAARLNPDHPEVWYELG 181
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 267
Y + GD E+S C+ + D A N G L++
Sbjct: 182 FCYDRLGDDERSLACYDRHLELDPYSADAWYN---------------------RGIVLNR 220
Query: 268 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 327
A E A+ W N NA GD R + + EK ++E +T Y
Sbjct: 221 MGRYREAVESYDYAIAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKVLEIEGGDPATYY 280
Query: 328 AVAVS 332
+A++
Sbjct: 281 NIALA 285
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 81/213 (38%), Gaps = 18/213 (8%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
+ LEE + L+E+ + + VW LG + G + S++ L +DP + D N
Sbjct: 154 DRLEEAVQALEEAARLNPDHPEVWYELGFCYDRLGDDERSLACYDRHLELDPYSADAWYN 213
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL---------LCKYGSVLAGAG 256
GI + G ++ + + I ++ +A N L + Y VL G
Sbjct: 214 RGIVLNRMGRYREAVESYDYAIAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKVLEIEG 273
Query: 257 ANTGE----GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 312
+ ++ A + AL+ DP A W L Y + C+
Sbjct: 274 GDPATYYNIALAYEELQEYETAIQYFQLALEEDPAYAEAWYGLGCCYDALERFEEAIACM 333
Query: 313 EKAAKLEPNCMSTRYAVA-----VSRIKDAERS 340
E+A L+P YA A R++DA +S
Sbjct: 334 ERAVTLQPETSEFWYAKADCEYNARRLQDALQS 366
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 69/351 (19%), Positives = 126/351 (35%), Gaps = 39/351 (11%)
Query: 135 GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLA 194
G + D L+P +E++++ + S + + + GR + ++ V+ LLA
Sbjct: 7 GFDDADDALDPSHIEQLVAAYEAQGSSAYFDSDTLEEIATYYYERGRFEDALGVIDRLLA 66
Query: 195 VDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL---------L 245
+ P D GI G E++ + ++ + + L+N L L
Sbjct: 67 LHPTASDAWMRRGILLSHLGRHEEALQAYERALSLNPTDTETLVNLGITLDNLGRFEEAL 126
Query: 246 CKYGSVLAGAGAN----TGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYL 301
Y L N G L++ + A + L A + +P +W L Y
Sbjct: 127 QAYERALQIDPLNDEIYYNLGITLERMDRLEEAVQALEEAARLNPDHPEVWYELGFCYDR 186
Query: 302 TGDHRSSGKCLEKAAKLEPNCMSTRY--AVAVSRIKDAERSQEPTEQLSWAGNEMASILR 359
GD S C ++ +L+P Y + ++R+ R +E E +A
Sbjct: 187 LGDDERSLACYDRHLELDPYSADAWYNRGIVLNRMG---RYREAVESYDYAI-------- 235
Query: 360 EGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNV 419
+Q + AW ++ A E+ E K+ E G + + + A A
Sbjct: 236 ---AIQEDFGSAWYNRGNALTNLGDLRGAIESYE----KVLEIEGGDPATYYNIALAYEE 288
Query: 420 AKECLLA------ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
+E A AL+ DP A W L Y + C+E+ + +
Sbjct: 289 LQEYETAIQYFQLALEEDPAYAEAWYGLGCCYDALERFEEAIACMERAVTL 339
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 99/263 (37%), Gaps = 36/263 (13%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P N ++ LG+ +R+ + +AV + E+A R D PE + +
Sbjct: 137 PLNDEIYYNLGITLERMDRLEEAVQALEEA----ARLNPD--HPE------VWYELGFCY 184
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+ GD+ E L+ ++ D A W G++L + GR + ++
Sbjct: 185 DRLGDD-----------ERSLACYDRHLELDPYSADAWYNRGIVLNRMGRYREAVESYDY 233
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYG 249
+A+ + N G A GD+ + + ++ ++ + PA N A L +Y
Sbjct: 234 AIAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKVLEIEGGDPATYYNIALAYEELQEYE 293
Query: 250 SVL-----------AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANA 298
+ + A A A G G C D A C+ A+ P+ + W A+
Sbjct: 294 TAIQYFQLALEEDPAYAEAWYGLGCCYDALERFEEAIACMERAVTLQPETSEFWYAKADC 353
Query: 299 YYLTGDHRSSGKCLEKAAKLEPN 321
Y + + + + +L+P
Sbjct: 354 EYNARRLQDALQSYRRVIELDPQ 376
>gi|443327009|ref|ZP_21055645.1| amino acid adenylation enzyme/thioester reductase family protein
[Xenococcus sp. PCC 7305]
gi|442793374|gb|ELS02825.1| amino acid adenylation enzyme/thioester reductase family protein
[Xenococcus sp. PCC 7305]
Length = 1731
Score = 48.9 bits (115), Expect = 0.006, Method: Composition-based stats.
Identities = 43/204 (21%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 140 DKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNN 199
+ + + E L + +++++ + + + + LG +L + GR++ +I++L+ + ++PNN
Sbjct: 1517 EAQTKQENLTAAAASYQQAVELEPQHSWFYQKLGQVLQRLGRIEKAITILTERIKLEPNN 1576
Query: 200 CDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANT 259
C+ L A GD + + DQ IN A + C+ G G T
Sbjct: 1577 CNAYSQLASAQISKGDFKGAISNL------DQALKLLPIN-PAKIYCQLGHAYHKQGVVT 1629
Query: 260 GEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL- 318
E C C A+ +P ++ L NA +G +++ E+A +L
Sbjct: 1630 -EAIC------------CYQKAITLNPSHPAVYTFLGNAQLKSGKFQNAVVSYEQAIQLN 1676
Query: 319 --EPNCMSTRYAVAVSRIKDAERS 340
+P + A+S+ D E++
Sbjct: 1677 SQQPFGVYKNLGDALSKEGDLEKA 1700
>gi|220918109|ref|YP_002493413.1| hypothetical protein A2cp1_3012 [Anaeromyxobacter dehalogenans
2CP-1]
gi|219955963|gb|ACL66347.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 254
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 23/156 (14%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 128
R P + L G++Y+ G +A + +A LR E +A H A
Sbjct: 55 RGAPGRPEGYLLRGIVYREQGLQAEAEADLREA----LRLERKLA--------AAHSALA 102
Query: 129 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 188
+L ++ G ++ +E +++ + + R A N +G L GR + +I V
Sbjct: 103 ILYDTQGRSAEAQEHH-----------RQAAELEPRNAGYLNNVGFSLFAHGRAREAIPV 151
Query: 189 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 224
L L P + NLG AY SGD+ ++A+ F+
Sbjct: 152 LHEALRAAPADARIRNNLGFAYAASGDLSRAAEQFE 187
>gi|386392026|ref|ZP_10076807.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Desulfovibrio sp. U5L]
gi|385732904|gb|EIG53102.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Desulfovibrio sp. U5L]
Length = 741
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 78/198 (39%), Gaps = 28/198 (14%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
++ + L + ES + W+ LGL L+ G +++ L +A PN+ D +
Sbjct: 146 DQAKRFLERFPESGKG-------WHLLGLSLVARGDGAAALEPLLRAVATLPNDVDLWDH 198
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPA-----------------ALINYAALLLCKY 248
LG AY G E++A F+ + ++P+ A+ +Y L C+
Sbjct: 199 LGSAYLHQGQPERAAHAFRRALALRPDYPSAHNNLGNALRELGQPQEAMASYRQALRCQP 258
Query: 249 GSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSS 308
+ A+T G L V A EC AL P N ANA G ++
Sbjct: 259 NHAM----AHTNLGIMLQSQGQVQAALECHARALALAPANVEAHVNSANALKELGRIEAA 314
Query: 309 GKCLEKAAKLEPNCMSTR 326
+A L+P+ + R
Sbjct: 315 VAAYGRALALDPDRLEAR 332
>gi|354566048|ref|ZP_08985221.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
gi|353546556|gb|EHC16004.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
Length = 357
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A+A + LGL GQ +A+++Y++A I L A L +Q
Sbjct: 145 PTMANAQYNLGLALYEKGQANEAIAAYQQA--INLNSNNANAYFNLAIALQ--------- 193
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
E +LEE ++ +++++ + AV +N +G +L G+ +++ +
Sbjct: 194 ------------EQGKLEEAIAAYRQTLKLNPDNAVAYNNMGSLLTIQGQTSEAVATYQT 241
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 224
+ PNN + NLG+A + G+ ++++ F+
Sbjct: 242 AIKRIPNNAEAYYNLGVALYNQGEFKKASSAFK 274
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 64/160 (40%), Gaps = 13/160 (8%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
+ LGL L K G+ ++I+ L ++P + NLG+A ++ G ++ +Q I
Sbjct: 117 YYNLGLALHKRGQADAAITAYRQALIINPTMANAQYNLGLALYEKGQANEAIAAYQQAIN 176
Query: 229 KDQNHPAALINYAALL---------LCKYGSVLA----GAGANTGEGACLDQASAVNVAK 275
+ N+ A N A L + Y L A A G+ L + A
Sbjct: 177 LNSNNANAYFNLAIALQEQGKLEEAIAAYRQTLKLNPDNAVAYNNMGSLLTIQGQTSEAV 236
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 315
A+K P A + NL A Y G+ + + ++A
Sbjct: 237 ATYQTAIKRIPNNAEAYYNLGVALYNQGEFKKASSAFKRA 276
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 48/248 (19%), Positives = 91/248 (36%), Gaps = 28/248 (11%)
Query: 153 SKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQ 212
S ++++Q D+ A N LG I+L+ R +++ + + ++PN + NLG+A +
Sbjct: 67 SAFRQALQIDSNIAAAHNYLGNIMLQQSRFDAAVQEYAEAIKLNPNLGEAYYNLGLALHK 126
Query: 213 SGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK---------YGSVL----AGAGANT 259
G + + ++ ++ + A N L K Y + A A
Sbjct: 127 RGQADAAITAYRQALIINPTMANAQYNLGLALYEKGQANEAIAAYQQAINLNSNNANAYF 186
Query: 260 GEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLE 319
L + + A LK +P A + N+ + + G + + A K
Sbjct: 187 NLAIALQEQGKLEEAIAAYRQTLKLNPDNAVAYNNMGSLLTIQGQTSEAVATYQTAIKRI 246
Query: 320 PNCMSTRYAVAVS---------------RIKDAERSQEPTEQLSWAGNEMASILREGDPV 364
PN Y + V+ R ++ R Q EQ + M + + +P
Sbjct: 247 PNNAEAYYNLGVALYNQGEFKKASSAFKRARNQYRKQGNIEQANKVEQLMQQVAQMQEPK 306
Query: 365 QIEPPIAW 372
Q + AW
Sbjct: 307 QPQVSQAW 314
>gi|403213589|emb|CCK68091.1| hypothetical protein KNAG_0A04120 [Kazachstania naganishii CBS
8797]
Length = 602
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 80/216 (37%), Gaps = 30/216 (13%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+L E + ++Q + W LGL+ +++ + + IS L + L +DPNN D + NL
Sbjct: 314 KLSEAAMAFEAAVQEKEQHIDAWLKLGLVQIQNEKEINGISALENCLKLDPNNLDAMKNL 373
Query: 207 GIAYFQSGDMEQSAKCF-------------------------QDLILKDQNHPAALINYA 241
I+Y G A F L+ + P +L
Sbjct: 374 AISYINEG---YDASAFTILNKWIETKYSTIDTSSPEIITDGHKLVESEMEDPLSLSEKI 430
Query: 242 ALLLCKYGSVLAGAGANTG--EGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 299
K + L ++ G N +C AL+ +P +W L A
Sbjct: 431 TKRFLKLANQLPVVDSDVQLCLGLLFYANDDFNKTIDCFKTALQVNPNDELMWNRLGAAL 490
Query: 300 YLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 335
+ S K +A +L+P+ + RY +AVS +
Sbjct: 491 ANSNRSEESIKAYHRALQLKPSFVRARYNLAVSSMN 526
>gi|430746859|ref|YP_007205988.1| O-linked N-acetylglucosamine transferase, SPINDLY family
[Singulisphaera acidiphila DSM 18658]
gi|430018579|gb|AGA30293.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Singulisphaera acidiphila DSM 18658]
Length = 873
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 140 DKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNN 199
D P E+L ++++ +D A W LGLI ++G + + L + P N
Sbjct: 25 DHRAGPFHQAELL--YRQALVADPNNAETWQLLGLIAHQAGYHDKGAAHIHQALLLSPGN 82
Query: 200 CDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNH 233
+ +LG Y + GD EQ+ CFQ++I + H
Sbjct: 83 AAYLNSLGSIYQEKGDYEQAIPCFQEVIRLEPTH 116
>gi|116071463|ref|ZP_01468731.1| TPR repeat [Synechococcus sp. BL107]
gi|116065086|gb|EAU70844.1| TPR repeat [Synechococcus sp. BL107]
Length = 400
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
+E +L+E + + + Q A+ W LGL+L K G + +++ LA+DPNN C
Sbjct: 285 MEQNQLDEAIQLTQTATQRAPEVALGWYNLGLMLRKKGEIAAALESYGRSLALDPNNAAC 344
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLI 227
N +A GD+E + F+ I
Sbjct: 345 HQNHAVARLLGGDIEAARNGFRTAI 369
>gi|427735486|ref|YP_007055030.1| hypothetical protein Riv7116_1944 [Rivularia sp. PCC 7116]
gi|427370527|gb|AFY54483.1| tetratricopeptide repeat protein [Rivularia sp. PCC 7116]
Length = 314
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 75/202 (37%), Gaps = 17/202 (8%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
++ ++ K+++Q D A + LGL L + G+LQ + V+P NLG
Sbjct: 68 QDAINAFKQAIQLDPSLAPAYYNLGLALRQVGQLQPAADAFYQATRVNPKFALAYANLGG 127
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL---------------LLCKYGSVLA 253
A + ++ Q+ Q + D A N L KY +
Sbjct: 128 ALLEGNNLGQAENYLQRSLEIDSKLGVAYYNLGLLHQQKEDCSKAVKSFRKAMKYSNKAP 187
Query: 254 GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
G C Q AK A+K +PK NL + Y G H + +
Sbjct: 188 EPAYQI--GLCYMQERKFKRAKTAFNQAIKMNPKYPEAHYNLGSILYTQGKHEQALEAFR 245
Query: 314 KAAKLEPNCMSTRYAVAVSRIK 335
KAA+ +P+ S Y ++ I+
Sbjct: 246 KAAEADPDYPSAYYGAGLAFIQ 267
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 160 QSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 219
Q A + GL L+++GR Q +I+ + +DP+ NLG+A Q G ++ +
Sbjct: 45 QYTRNTATTYLNQGLQLIQTGRPQDAINAFKQAIQLDPSLAPAYYNLGLALRQVGQLQPA 104
Query: 220 AKCF 223
A F
Sbjct: 105 ADAF 108
>gi|333987314|ref|YP_004519921.1| hypothetical protein MSWAN_1100 [Methanobacterium sp. SWAN-1]
gi|333825458|gb|AEG18120.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 197
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 65/166 (39%), Gaps = 13/166 (7%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
WN G+ L KSG+ + +I +L +DP N + N G+ Y G +++ F ++
Sbjct: 14 WNNKGINLGKSGKYKEAIECFDKVLKIDPKNVRALDNKGVTYGLLGKAQEALDYFDKVLE 73
Query: 229 KDQNHPAALINYAALL--LCKYGSVLAGAGA------NTGE-----GACLDQASAVNVAK 275
D + A N + KY + N E G L + A
Sbjct: 74 LDPKNAEAWNNKGLAFEDIGKYQEAIKSYDKSLELDPNNSETWYNKGISLKKLEKYQEAL 133
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
+ ALK+ P W N A ++ + +C +K KL+PN
Sbjct: 134 KSFNKALKSYPNYVDAWNNKGLALAQLKKYQEALECFDKVLKLDPN 179
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 54/138 (39%), Gaps = 21/138 (15%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E L + ++ D + A WN GL G+ Q +I L +DPNN + N GI
Sbjct: 62 QEALDYFDKVLELDPKNAEAWNNKGLAFEDIGKYQEAIKSYDKSLELDPNNSETWYNKGI 121
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
+ + +++ K F + +++P NY A +G L Q
Sbjct: 122 SLKKLEKYQEALKSFNKAL---KSYP----NY--------------VDAWNNKGLALAQL 160
Query: 269 SAVNVAKECLLAALKADP 286
A EC LK DP
Sbjct: 161 KKYQEALECFDKVLKLDP 178
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 61/145 (42%), Gaps = 22/145 (15%)
Query: 198 NNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGA 257
NN N GI +SG +++ +CF ++ D + AL N YG L G
Sbjct: 9 NNVKAWNNKGINLGKSGKYKEAIECFDKVLKIDPKNVRALDNKGVT----YG--LLGKAQ 62
Query: 258 NTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAK 317
LD V L+ DPK A W N A+ G ++ + K +K+ +
Sbjct: 63 -----EALDYFDKV----------LELDPKNAEAWNNKGLAFEDIGKYQEAIKSYDKSLE 107
Query: 318 LEPNCMSTRYAVAVSRIKDAERSQE 342
L+PN T Y +S +K E+ QE
Sbjct: 108 LDPNNSETWYNKGIS-LKKLEKYQE 131
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 41/91 (45%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+ +E + +S++ D + W G+ L K + Q ++ + L PN D N
Sbjct: 94 KYQEAIKSYDKSLELDPNNSETWYNKGISLKKLEKYQEALKSFNKALKSYPNYVDAWNNK 153
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAAL 237
G+A Q +++ +CF ++ D N AL
Sbjct: 154 GLALAQLKKYQEALECFDKVLKLDPNSETAL 184
>gi|212212959|ref|YP_002303895.1| tetratricopeptide repeat family protein [Coxiella burnetii
CbuG_Q212]
gi|212011369|gb|ACJ18750.1| tetratricopeptide repeat family protein [Coxiella burnetii
CbuG_Q212]
Length = 561
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 90/223 (40%), Gaps = 31/223 (13%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
+E E + +++LK ++ + + ++ L + + G +I+ LA++P N D
Sbjct: 149 IELENYHQAIAELKRTVAMSSHHSAAFSQLAHVYMYLGDFSKAITYYEKRLALEPENADA 208
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 262
+ G+A+ + +++ F + +L + HP C Y LA A G+
Sbjct: 209 QYDCGLAHLKDNQFQKAIDYFTNALLLNPEHPD----------CHYS--LATAYLQRGDH 256
Query: 263 ACLDQASAVNVAKECLLAALKADPKAAHI--WANLANAYYLTGDHRSSGKCLEKAAKLEP 320
KE LL L+ K I + N+ + HR + ++A L+P
Sbjct: 257 ------------KEALLHYLRQLEKKPQIECYYNVGVLHMYQERHREAIDYFKQALILDP 304
Query: 321 NCMSTRYAVA-----VSRIKDAERSQEPTEQLSWAGNEMASIL 358
N +A +++IK A E T L +E+ IL
Sbjct: 305 NYREAHLNIAAVYLKINQIKQAIEHYESTLVLKPNDSEIEHIL 347
>gi|164519037|ref|NP_945318.2| transmembrane and TPR repeat-containing protein 1 [Mus musculus]
gi|342187061|sp|Q3UV71.2|TMTC1_MOUSE RecName: Full=Transmembrane and TPR repeat-containing protein 1
Length = 942
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 134/336 (39%), Gaps = 50/336 (14%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E+ EE + LKES++ A +++L +L + R + + + + + P++ D N
Sbjct: 622 EKTEEAIMLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDIYQAGIKNCPDSSDLHNN 681
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
+ SG E++ +Q I +H A++N G + G N+
Sbjct: 682 YAVFLVDSGFPEKAVAHYQQAIQLSPSHHVAVVNL--------GRLYRSLGENSK----- 728
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
A+E ALK + A + + L YY TG H+ + + +A L+P+
Sbjct: 729 --------AEEWYRRALKVA-RTAEVLSPLGALYYNTGRHKEALEVYREAVSLQPSQREL 779
Query: 326 RYAVA-----VSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQK 380
R A+A + + K+AE+ + S + +P +E + +A+
Sbjct: 780 RLALAQVLAVMGQTKEAEK--------------ITSHIVSEEPRCLE---CYRLLSAIHS 822
Query: 381 THHEVAAAFETEENELS-KMEECAGAGESAF-----LDQASAVNVAKECLLAALKADPKA 434
A E E L K ++ E F L + + ++ A E AA+ DP
Sbjct: 823 KQEHHGKALEAIEKALQLKPKDPKVISELFFTKGNQLREQNLLDKAFESYEAAVTLDPDQ 882
Query: 435 AHIWANLANAYYLTGDHRSSGKCLEKVLMVYCSSNL 470
A W N+ ++ G + S+ E+ L + S L
Sbjct: 883 AQAWMNMGGIRHIQGSYVSARAYYERALKLVPDSKL 918
>gi|300865590|ref|ZP_07110367.1| TPR repeat-containing protein (fragment) [Oscillatoria sp. PCC
6506]
gi|300336405|emb|CBN55517.1| TPR repeat-containing protein (fragment) [Oscillatoria sp. PCC
6506]
Length = 410
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 82/229 (35%), Gaps = 23/229 (10%)
Query: 112 IARPELLSLVQIHHA--QCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVW 169
A PE+ + + + L+ S D EE + +++Q A W
Sbjct: 158 FADPEIQEFTPVKYGDRKQLMSGSDYAKQGDAYFFENRYEEAVDAYNQALQIQPDLADTW 217
Query: 170 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL- 228
N G++L + R Q +I + PN D N G+ + + ++ C++ I
Sbjct: 218 NNRGVVLTRMQRYQEAIDSYEQATKLRPNYPDAWNNRGVVLLEMQQLSEAIACYEQAIQA 277
Query: 229 ----------------KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVN 272
K Q + A+I+Y L+ K A G L + +
Sbjct: 278 KADYADAWNNRGVALSKMQKYEDAVISYNQALVIKNDYT----DAWNNRGVALTKLQKYD 333
Query: 273 VAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
A + A K P IW N A Y L G+ + + L++A L N
Sbjct: 334 AAIDSYDNATKIRPDFYRIWYNKARCYALQGEIELALENLKRAFNLNQN 382
>gi|170094074|ref|XP_001878258.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646712|gb|EDR10957.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 793
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 28/192 (14%)
Query: 134 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLL 193
SG S+D E+LE+ ++ + ++++D R W LG L+ +++ + +
Sbjct: 609 SGHESID-----EDLEKAINFFQSALRADPRHYNAWYGLGTCYLRMSKIRLAEYHYRKAV 663
Query: 194 AVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-LKDQNHPAALINYAALLLCKYGSVL 252
+ PNN +G +G+A + GD + + F + + L N AL+ Y
Sbjct: 664 EIHPNNAVLLGCVGMAVDRRGDRDAALALFDEAVRLAPDN---ALVRYR----------- 709
Query: 253 AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 312
L A E L++ + P+ +++ LA Y L GD +S K L
Sbjct: 710 --------RAKILVSMRKYERAVEDLVSLRNSTPEESNVVFQLAKVYRLLGDEVNSAKTL 761
Query: 313 EKAAKLEPNCMS 324
A + P M+
Sbjct: 762 ALARDISPKSMN 773
>gi|74210446|dbj|BAE23402.1| unnamed protein product [Mus musculus]
Length = 942
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 134/336 (39%), Gaps = 50/336 (14%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E+ EE + LKES++ A +++L +L + R + + + + + P++ D N
Sbjct: 622 EKTEEAIMLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDIYQAGIKNCPDSSDLHNN 681
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
+ SG E++ +Q I +H A++N G + G N+
Sbjct: 682 YAVFLVDSGFPEKAVAHYQQAIQLSPSHHVAVVNL--------GRLYRSLGENSK----- 728
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
A+E ALK + A + + L YY TG H+ + + +A L+P+
Sbjct: 729 --------AEEWYRRALKVA-RTAEVLSPLGALYYNTGRHKEALEVYREAVSLQPSQREL 779
Query: 326 RYAVA-----VSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQK 380
R A+A + + K+AE+ + S + +P +E + +A+
Sbjct: 780 RLALAQVLAVMGQTKEAEK--------------ITSHIVSEEPRCLE---CYRLLSAIHS 822
Query: 381 THHEVAAAFETEENELS-KMEECAGAGESAF-----LDQASAVNVAKECLLAALKADPKA 434
A E E L K ++ E F L + + ++ A E AA+ DP
Sbjct: 823 KQEHHGKALEAIEKALQLKPKDPKVISELFFTKGNQLREQNLLDKAFESYEAAVTLDPDQ 882
Query: 435 AHIWANLANAYYLTGDHRSSGKCLEKVLMVYCSSNL 470
A W N+ ++ G + S+ E+ L + S L
Sbjct: 883 AQAWMNMGGIRHIQGSYVSARAYYERALKLVPDSKL 918
>gi|153207820|ref|ZP_01946420.1| tetratricopeptide repeat protein/methyltransferase [Coxiella
burnetii 'MSU Goat Q177']
gi|212218831|ref|YP_002305618.1| tetratricopeptide repeat family protein [Coxiella burnetii
CbuK_Q154]
gi|120576372|gb|EAX32996.1| tetratricopeptide repeat protein/methyltransferase [Coxiella
burnetii 'MSU Goat Q177']
gi|212013093|gb|ACJ20473.1| tetratricopeptide repeat family protein [Coxiella burnetii
CbuK_Q154]
Length = 561
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 90/223 (40%), Gaps = 31/223 (13%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
+E E + +++LK ++ + + ++ L + + G +I+ LA++P N D
Sbjct: 149 IELENYHQAIAELKRTVAMSSHHSAAFSQLAHVYMYLGDFSKAITYYEKRLALEPENADA 208
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 262
+ G+A+ + +++ F + +L + HP C Y LA A G+
Sbjct: 209 QYDCGLAHLKDNQFQKAIDYFTNALLLNPEHPD----------CHYS--LATAYLQRGDH 256
Query: 263 ACLDQASAVNVAKECLLAALKADPKAAHI--WANLANAYYLTGDHRSSGKCLEKAAKLEP 320
KE L+ L+ K I + N+ + HR + ++A L+P
Sbjct: 257 ------------KEALIHYLRQLEKKPQIECYYNVGVLHMYQERHREAIDYFKQALTLDP 304
Query: 321 NCMSTRYAVA-----VSRIKDAERSQEPTEQLSWAGNEMASIL 358
N +A +++IK A E T L +E+ IL
Sbjct: 305 NYREAHLNIAAVYLKINQIKQAIEHYESTLVLKPNDSEIEHIL 347
>gi|117924934|ref|YP_865551.1| hypothetical protein Mmc1_1636 [Magnetococcus marinus MC-1]
gi|117608690|gb|ABK44145.1| Tetratricopeptide TPR_2 repeat protein [Magnetococcus marinus MC-1]
Length = 968
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 75/188 (39%), Gaps = 21/188 (11%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
L+ +L++ ++ + + W +G LL +G+ ++ LA+DP +
Sbjct: 15 LQQGQLQQAINSYQNLLAQHPESVAAWQGIGSALLAAGQPLQAVDFFERALALDPQHYPS 74
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 262
I LG Y Q G +E++ + F N P N G VLA G
Sbjct: 75 ILALGTLYQQQGRLERAVQLFLRGAQLQPNQPLVHFN--------LGVVLAAQGRTEQAQ 126
Query: 263 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
+ +A A+N + P+A W NL N TG+ + + C ++A + P+
Sbjct: 127 SAYRKALALN----------ENIPEA---WLNLGNLLSRTGELQQALVCYQQALQRRPSF 173
Query: 323 MSTRYAVA 330
+ +A
Sbjct: 174 TQAGFGLA 181
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 23/136 (16%)
Query: 89 GQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEEL 148
GQPL+AV +E+A + P +L+L ++ Q L
Sbjct: 52 GQPLQAVDFFERALAL-----DPQHYPSILALGTLYQQQG------------------RL 88
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
E + Q Q +V LG++L GR + + S LA++ N + NLG
Sbjct: 89 ERAVQLFLRGAQLQPNQPLVHFNLGVVLAAQGRTEQAQSAYRKALALNENIPEAWLNLGN 148
Query: 209 AYFQSGDMEQSAKCFQ 224
++G+++Q+ C+Q
Sbjct: 149 LLSRTGELQQALVCYQ 164
>gi|229593982|ref|XP_001025913.2| TPR Domain containing protein [Tetrahymena thermophila]
gi|225567182|gb|EAS05668.2| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 804
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 111/278 (39%), Gaps = 34/278 (12%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
PK ++ LG+ Y+ G +A+ +Y+K EI + E +L + A+ L+
Sbjct: 432 PKEDSCYYNLGIAYKDKGMLDEAIKAYQKCLEINPKKEIC-----FYNLGIAYKAKGLID 486
Query: 132 ESSGDNSLDKELEPEE----------------LEEILSKLKESMQSDTRQAVVWNTLGLI 175
E+ E+ PE+ L+E + ++ ++ + ++ + + LGL
Sbjct: 487 EAIQSYQKCLEINPEKDTCLHNLGIAYKAKGLLDEAIKSYQKCIEINPKKDIYYMNLGLA 546
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
++ G L +I + ++P C NLGIAY G ++ K +Q + + H +
Sbjct: 547 YMEKGMLNEAIKQYQKCIEINPKEDSCYFNLGIAYENKGMSGEAIKSYQKCVEINPQHDS 606
Query: 236 ALIN----YAA--LLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKA----- 284
L N Y A +L S N + CL AK A+K+
Sbjct: 607 CLYNLGIAYKAKGMLDEAIKSYQKCLEINPKKDICLYNLGIAYKAKGVYDEAIKSYYKCL 666
Query: 285 --DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
+PK + NL YY G + K +K K+ P
Sbjct: 667 EINPKHDNCHMNLGLTYYDKGMLDDAIKSYQKCLKINP 704
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 98/250 (39%), Gaps = 44/250 (17%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
PK +F LG+ Y+ G +A+ SY+K EI P+ H CL
Sbjct: 568 PKEDSCYFNLGIAYENKGMSGEAIKSYQKCVEI---------NPQ--------HDSCLY- 609
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+ G K + L+E + ++ ++ + ++ + LG+ G +I
Sbjct: 610 -NLGIAYKAKGM----LDEAIKSYQKCLEINPKKDICLYNLGIAYKAKGVYDEAIKSYYK 664
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 251
L ++P + +C NLG+ Y+ G ++ + K +Q + + H +N
Sbjct: 665 CLEINPKHDNCHMNLGLTYYDKGMLDDAIKSYQKCLKINPKHDICYMNLGI--------- 715
Query: 252 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 311
A G+G A+ ++CL + +PK + NL AY G + +
Sbjct: 716 -----AYKGKGML---EEAIQFYQKCL----EINPKKDSCYYNLGIAYKAKGMMDKAIQS 763
Query: 312 LEKAAKLEPN 321
+K L PN
Sbjct: 764 YKKCLSLNPN 773
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 72/168 (42%), Gaps = 23/168 (13%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
PK + LG+ Y+ G +A+ SY K EI P+ H C +
Sbjct: 636 PKKDICLYNLGIAYKAKGVYDEAIKSYYKCLEI---------NPK--------HDNCHM- 677
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+ G DK + L++ + ++ ++ + + + + LG+ G L+ +I
Sbjct: 678 -NLGLTYYDKGM----LDDAIKSYQKCLKINPKHDICYMNLGIAYKGKGMLEEAIQFYQK 732
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 239
L ++P C NLGIAY G M+++ + ++ + + NH L N
Sbjct: 733 CLEINPKKDSCYYNLGIAYKAKGMMDKAIQSYKKCLSLNPNHKNCLKN 780
>gi|40063716|gb|AAR38497.1| TPR repeat protein [uncultured marine bacterium 583]
Length = 733
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 15/189 (7%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
EL+E + ++++ A V LGL L G+L +++ +A+ P+ + NL
Sbjct: 56 ELDEAVKSFEKALAIKPDYAEVHYNLGLTLQDLGQLDAAVKSYEKAIAIKPDYANACNNL 115
Query: 207 GIAYFQSGDMEQSAKCFQ-------DLILKDQNHPAALINYAAL---LLCKYGSVLA--- 253
G+ G ++ + K ++ D + N AL N L + C Y LA
Sbjct: 116 GVTLQDLGQLDAAVKSYEKAIAIKPDFSDANNNLGIALKNLGQLDAAVEC-YKKALAIKP 174
Query: 254 -GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 312
A A+ G L ++ A EC AL P A NL NA G ++ KC
Sbjct: 175 DYAEAHYNLGNALKNLGQLDAAVECYKKALAIKPDYADACNNLGNALKNLGQLDAAVKCY 234
Query: 313 EKAAKLEPN 321
EKA ++P+
Sbjct: 235 EKAVAIKPD 243
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 80/204 (39%), Gaps = 13/204 (6%)
Query: 131 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
P + NSL +++E L + ++ +++N G+ G L ++
Sbjct: 6 PPQTEINSLIALYSSGQIQEALDSVGALIKEYPNDPLLYNLSGICYKTIGELDEAVKSFE 65
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL------ 244
LA+ P+ + NLG+ G ++ + K ++ I ++ A N L
Sbjct: 66 KALAIKPDYAEVHYNLGLTLQDLGQLDAAVKSYEKAIAIKPDYANACNNLGVTLQDLGQL 125
Query: 245 ---LCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 297
+ Y +A + AN G L ++ A EC AL P A NL N
Sbjct: 126 DAAVKSYEKAIAIKPDFSDANNNLGIALKNLGQLDAAVECYKKALAIKPDYAEAHYNLGN 185
Query: 298 AYYLTGDHRSSGKCLEKAAKLEPN 321
A G ++ +C +KA ++P+
Sbjct: 186 ALKNLGQLDAAVECYKKALAIKPD 209
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 99/241 (41%), Gaps = 27/241 (11%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARP------ELLSLVQI-- 123
P A H+ LGL Q LGQ AV SYEKA + + D A L L Q+
Sbjct: 72 PDYAEVHYNLGLTLQDLGQLDAAVKSYEKA----IAIKPDYANACNNLGVTLQDLGQLDA 127
Query: 124 -----HHAQCLLPE-SSGDNSLDKELEP-EELEEILSKLKESMQSDTRQAVVWNTLGLIL 176
A + P+ S +N+L L+ +L+ + K+++ A LG L
Sbjct: 128 AVKSYEKAIAIKPDFSDANNNLGIALKNLGQLDAAVECYKKALAIKPDYAEAHYNLGNAL 187
Query: 177 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 236
G+L +++ LA+ P+ D NLG A G ++ + KC++ + ++ A
Sbjct: 188 KNLGQLDAAVECYKKALAIKPDYADACNNLGNALKNLGQLDAAVKCYEKAVAIKPDYAEA 247
Query: 237 LINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 296
N GSV+ A + A A+ + +L L + + IW +LA
Sbjct: 248 YHN--------NGSVMRRLKRQDEALASYESAIAIKPNLDFILGDLLSTKMSLCIWDDLA 299
Query: 297 N 297
+
Sbjct: 300 H 300
>gi|374289602|ref|YP_005036687.1| hypothetical protein BMS_2965 [Bacteriovorax marinus SJ]
gi|301168143|emb|CBW27731.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
Length = 283
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 45/82 (54%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
++ E L LK++ + D + + N LG+ G+ +++ L L +D N D + N
Sbjct: 48 KDYREALKYLKQAYEIDPKDTKILNNLGMSYYFLGQTKTAFKYLEESLDIDSKNSDALNN 107
Query: 206 LGIAYFQSGDMEQSAKCFQDLI 227
+G YF++ + ++S K +Q+++
Sbjct: 108 IGSLYFKNKEYDKSLKSYQEVL 129
>gi|118581067|ref|YP_902317.1| hypothetical protein Ppro_2656 [Pelobacter propionicus DSM 2379]
gi|118503777|gb|ABL00260.1| Tetratricopeptide TPR_2 repeat protein [Pelobacter propionicus DSM
2379]
Length = 568
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 99/230 (43%), Gaps = 34/230 (14%)
Query: 12 GKKINKLGKCRSRIS---SKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLKTGLVHVA 68
GK +G R+ I SK D+ L V T EE V++LK+ +
Sbjct: 123 GKDTEAVGYLRTAIQLDPSKEDAYLHLAVSL--------TRMFEYEEAVTTLKS----LV 170
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPEL----------L 118
++ P++ ++ LG Y ++ AV ++K+ I LR E A ++
Sbjct: 171 KQNPESVLGYYYLGRSYSQMKLYRDAVGYFKKS--IELRPEFSQAAIDMAASYEALGDYT 228
Query: 119 SLVQIHHAQCLLPESSGDNSLDKEL-----EPEELEEILSKLKESMQSDTRQAVVWNTLG 173
++I+H LL E ++ + L + +E L L +S S A +G
Sbjct: 229 KAIEIYHD--LLDEDESRTAVQQRLIQLLIQQRRFQEALEYLNQSAGSGLSSAETMRKIG 286
Query: 174 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 223
LI L+ + +I+V + LL DP+ LG+AY + GD++++ F
Sbjct: 287 LIHLELEQYDEAIAVFNDLLEKDPSAHHVRLYLGVAYEEKGDLDRAKAEF 336
>gi|45358236|ref|NP_987793.1| hypothetical protein MMP0673 [Methanococcus maripaludis S2]
gi|44920993|emb|CAF30229.1| TPR repeat [Methanococcus maripaludis S2]
Length = 409
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/329 (17%), Positives = 119/329 (36%), Gaps = 45/329 (13%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
L EE ++ L + ++ D W G+ L G S+
Sbjct: 103 LSQEEYDKALYYYNKLLEIDNSVGKTWFYKGICLKMLGNYDESVEAFDKSTGDYETLFLT 162
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 262
+LG Y+Q+G+ +++ CF + D N +L G+G
Sbjct: 163 WNDLGYCYYQNGEYDKAIGCFDKALTLDGNLKYSL---------------------NGKG 201
Query: 263 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLE--- 319
C ++ +A EC A+ D N + Y + + + C EKA L
Sbjct: 202 LCCEKKEQYTMAVECFDKAVIQDECYYDAIYNKGISCYKSKKYSCAISCFEKALDLNNSN 261
Query: 320 PNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEP--PIAWAGFAA 377
P C + A +++R+ + E++ +L ++++ PI W+G
Sbjct: 262 PYCYFYK-ADSLNRLGEYEKA----------------VLNYKKAIELDSKNPIFWSGLGL 304
Query: 378 VQKTHHEVAAAFETEEN--ELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAA 435
+E ++ ++ E EL+ ++ + + + N + +L +
Sbjct: 305 SYNYLNEYNSSIQSYEKAVELNPEDDISWSNLGYLQYKNKNYNESISYFEKSLDLNSNNK 364
Query: 436 HIWANLANAYYLTGDHRSSGKCLEKVLMV 464
+ W L N+Y L ++ + C +K + +
Sbjct: 365 YAWNGLGNSYLLLKNYEKALMCYDKAIEI 393
>gi|340345065|ref|ZP_08668197.1| TPR-repeat protein [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339520206|gb|EGP93929.1| TPR-repeat protein [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 273
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 82/183 (44%), Gaps = 26/183 (14%)
Query: 160 QSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 219
+ DT + +++N + L L+ + + +IS+ + +L DP N + N G+A Q +
Sbjct: 7 KEDT-EDMMYNAMSL--LEKNQPKGAISIFTKILKQDPKNISALYNKGLALNQIKKYSDA 63
Query: 220 AKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLL 279
CF DL+L+ AA IN + + + G++ +GA EC
Sbjct: 64 VTCF-DLLLEINPKDAAAINNKGIAMAELGNI---------QGAS-----------ECYD 102
Query: 280 AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY--AVAVSRIKDA 337
A++ DPK + N +H + C EKA ++ P+ + ++ + + ++K
Sbjct: 103 KAMEVDPKYGPSYFNKGVLLDKLQEHEEALNCFEKAIQVSPSKPNAQFYKGIILGKLKRH 162
Query: 338 ERS 340
E +
Sbjct: 163 EEA 165
>gi|165923888|ref|ZP_02219720.1| tetratricopeptide repeat protein/methyltransferase [Coxiella
burnetii Q321]
gi|165916673|gb|EDR35277.1| tetratricopeptide repeat protein/methyltransferase [Coxiella
burnetii Q321]
Length = 561
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 90/223 (40%), Gaps = 31/223 (13%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
+E E + +++LK ++ + + ++ L + + G +I+ LA++P N D
Sbjct: 149 IELENYHQAIAELKRTVAMSSHHSAAFSQLAHVYMYLGDFSKAITYYEKRLALEPENADA 208
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 262
+ G+A+ + +++ F + +L + HP C Y LA A G+
Sbjct: 209 QYDCGLAHLKDNQFQKAIDYFTNALLLNPEHPD----------CHYS--LATAYLQRGDH 256
Query: 263 ACLDQASAVNVAKECLLAALKADPKAAHI--WANLANAYYLTGDHRSSGKCLEKAAKLEP 320
KE L+ L+ K I + N+ + HR + ++A L+P
Sbjct: 257 ------------KEALIHYLRQLEKKPQIECYYNVGVLHMYQERHREAIDYFKQALTLDP 304
Query: 321 NCMSTRYAVA-----VSRIKDAERSQEPTEQLSWAGNEMASIL 358
N +A +++IK A E T L +E+ IL
Sbjct: 305 NYREAHLNIAAVYLKINQIKQAIEHYESTLVLKPNDSEIEHIL 347
>gi|395762114|ref|ZP_10442783.1| hypothetical protein JPAM2_10234 [Janthinobacterium lividum PAMC
25724]
Length = 892
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 13/160 (8%)
Query: 175 ILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP 234
+L ++ R + +I++ + L ++P N D + NLGIA + G +E + F+ + L ++P
Sbjct: 297 LLRETRRKEPAIAIYQAALLLEPGNIDALNNLGIALQEDGQLEAALASFRQVALLAPDNP 356
Query: 235 AALINYAALL-----------LCKYGSVLA--GAGANTGEGACLDQASAVNVAKECLLAA 281
N AA+L C+ L A+ G CL + ++ A
Sbjct: 357 VTHSNIAAVLNAMGQREAALESCRRAVKLGPKSTAAHVNLGTCLMEMGRLSDAVNSFETV 416
Query: 282 LKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
+K DP + NL+ A G + + KA K+ P+
Sbjct: 417 VKLDPHHRRAYVNLSAALTRLGRIDQAIEHCRKALKINPD 456
>gi|260771469|ref|ZP_05880394.1| TPR repeat protein [Vibrio furnissii CIP 102972]
gi|260613595|gb|EEX38789.1| TPR repeat protein [Vibrio furnissii CIP 102972]
Length = 352
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 171 TLGLILLKSGRLQSSISVLSSLLAVD--PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
T+G I G L+ +S + LLA+D PNN + LG Y + GD+EQ F I
Sbjct: 90 TIGRIHQSRGNLE--LSEKAYLLALDANPNNIKVLQQLGSNYTKQGDVEQGESYFIRAIN 147
Query: 229 KDQNHPAAL----INYAALLLCKYGSV--LAGAGANTGEGACLDQASAVNVAKECLLAAL 282
DQ A+ +N ++ + S + A A G G D + +VAK AL
Sbjct: 148 ADQLRLASREKLALNSVSITAIEQLSSDNQSPALAYMGLGILYDMKAKHHVAKAFYQHAL 207
Query: 283 KADPKAAHIWANLANAYYLTGDHRSSGK 310
K +PK++ N+ +YY++G++ ++ +
Sbjct: 208 KIEPKSSKALMNMGYSYYMSGEYDNAKR 235
>gi|223937044|ref|ZP_03628952.1| TPR repeat-containing protein [bacterium Ellin514]
gi|223894325|gb|EEF60778.1| TPR repeat-containing protein [bacterium Ellin514]
Length = 466
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 104/266 (39%), Gaps = 44/266 (16%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
PK+A A+ Y + G KA+S Y +A +QI+
Sbjct: 125 PKDAWAYAKRAADYHKKGDSEKAISDYTQA-------------------IQINPKDANYY 165
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+S G K + ++ ++ + ++ + +Q +N+ GL G + +I LS
Sbjct: 166 DSRGRAYAMKR----DWDKAIADYDQVVKLNPKQVSAYNSRGLAYAMKGDMDKAIRDLSE 221
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-LKDQNHPAALINYAALLLC---- 246
++ ++P + G+ G++Y GD +++ F +LI LK P I Y +
Sbjct: 222 VIKLNPKDAPAYGSRGLSYAMKGDWDKAVSDFSELIKLK----PTDSIGYDSRATAYQNQ 277
Query: 247 -KYGSVLAG-----------AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWAN 294
K LA AGA G A E +++ +P+ A +A
Sbjct: 278 GKLDEALADFSEAIKLNDKDAGAFHNRGLIYVGKGDWEKAIENFSKSIQLNPQDADAFAK 337
Query: 295 LANAYYLTGDHRSSGKCLEKAAKLEP 320
AYY G+++ + +A +L P
Sbjct: 338 RGYAYYQKGEYQKGIDDINEALRLNP 363
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 23/155 (14%)
Query: 64 LVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQI 123
L V + PK+A A+ GL Y G KAVS + +E I L+ I
Sbjct: 219 LSEVIKLNPKDAPAYGSRGLSYAMKGDWDKAVSDF--SELIKLKPTDSIG---------- 266
Query: 124 HHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQ 183
+ ++ ++ G +L+E L+ E+++ + + A ++ GLI + G +
Sbjct: 267 YDSRATAYQNQG-----------KLDEALADFSEAIKLNDKDAGAFHNRGLIYVGKGDWE 315
Query: 184 SSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQ 218
+I S + ++P + D G AY+Q G+ ++
Sbjct: 316 KAIENFSKSIQLNPQDADAFAKRGYAYYQKGEYQK 350
>gi|253998548|ref|YP_003050611.1| hypothetical protein Msip34_0836 [Methylovorus glucosetrophus
SIP3-4]
gi|253985227|gb|ACT50084.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus glucosetrophus
SIP3-4]
Length = 927
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 36/219 (16%)
Query: 15 INKLGKCR---SRISSKMDSALE---FGVDADGDQSGLGTSSSS---REEKVSSLKTGLV 65
+N LG RIS ++ L+ D+ S LG S SS E+ + + KT +
Sbjct: 450 LNNLGNLHHSHDRISQAIECYLKSIAIKPDSARAYSNLGNSYSSLKDYEKAIDAYKTAI- 508
Query: 66 HVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHH 125
R P+ + A++ LG + Q A+ SY++ EI E D + ++ +
Sbjct: 509 ---RLDPQYSDAYYNLGTAQMEIKQFRDAIYSYKQVLEI----EPDSVK----AMNNLGV 557
Query: 126 AQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSS 185
A L E ++ EEI SK+ +T + +G + + +L+ S
Sbjct: 558 AHTALNEF------------KQAEEIFSKV---FSYETGHLEAYGNMGNVCCSNNQLEES 602
Query: 186 ISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 224
I L +D N + + NLG+ Y + GD EQ K ++
Sbjct: 603 IKWYEKALEIDAKNPETLWNLGLVYLRQGDFEQGWKHYE 641
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 108/272 (39%), Gaps = 47/272 (17%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P++A AH+ LG+ + + Q +A++SY +A I L+ + R E + + HA
Sbjct: 70 PRHADAHYNLGIAFGAVRQYPQAIASYMQA--IALKPD----RAEAYYNLGVSHAAL--- 120
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+LE + KE+++ + + LG++L G+ + + S
Sbjct: 121 --------------GQLEPATASYKEAIRLNPAYIKAYRNLGVVLEAQGKHTEATAAYQS 166
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY-GS 250
LL P++ + L I + + K F + I+ H + I + Y
Sbjct: 167 LLKFRPDDAEAHHQLAINF-------STQKKFDEAII----HYSRAIEINPEFVDAYCNK 215
Query: 251 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGK 310
+A N E A L +A+ + P A I+ NL N + +
Sbjct: 216 AIALGKLNKLEDAILMYKAAIELV-----------PDEASIYNNLGNIFSRKRQFEEALS 264
Query: 311 CLEKAAKLEPNCMSTRYAVAVSRIKDAERSQE 342
C E A +L+P + + A + + D ER +E
Sbjct: 265 CFENAIRLQPTYLKA-HCNAGNALIDLERVEE 295
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 88/238 (36%), Gaps = 49/238 (20%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E +EE + K++++ A N+LG+ K R +I+ +A+ PN + I N
Sbjct: 291 ERVEEAIHHYKKALEIHPDHAEAHNSLGIAYSKLSRYNEAIASYQRAIALMPNYAEAICN 350
Query: 206 LGI----------------------------------AYFQSGDMEQSAKCFQDLILKDQ 231
LGI Y G E++A ++ + +
Sbjct: 351 LGITLCATLEVEAAIPLLKQSLAIYADNLIAHVHLAETYAVLGRFEEAAPHYEYALKLSE 410
Query: 232 NHPAALINYAALLLCKYGSV-LAG-------------AGANTGEGACLDQASAVNVAKEC 277
+P LIN A + K G LA A G ++ A EC
Sbjct: 411 KNP-QLINALANIYVKTGQHDLAKEYFERALEIDPRFTDALNNLGNLHHSHDRISQAIEC 469
Query: 278 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 335
L ++ P +A ++NL N+Y D+ + + A +L+P Y + ++++
Sbjct: 470 YLKSIAIKPDSARAYSNLGNSYSSLKDYEKAIDAYKTAIRLDPQYSDAYYNLGTAQME 527
>gi|225871857|ref|YP_002753311.1| hypothetical protein ACP_0165 [Acidobacterium capsulatum ATCC
51196]
gi|225793226|gb|ACO33316.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196]
Length = 436
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 71/178 (39%), Gaps = 21/178 (11%)
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
+K ++ D + IL G+L +I+ L L + P+N L AY QSG
Sbjct: 237 VKSALTRDPDDPTLNAEYAAILSAEGKLTEAIASLEKLHQLHPHNPTVANMLADAYLQSG 296
Query: 215 DMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 274
DM+++A + +I + AL +Y G L + A
Sbjct: 297 DMDKAAALYPQVIAAQPGNTDALDSY---------------------GQVLIRQKRFPEA 335
Query: 275 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 332
ALKA P + +A A TG ++ LE+ A+L PN +T + +A +
Sbjct: 336 VSTFQQALKAQPGDIDALSGVAFASNETGQYQQEIAALEQRAQLTPNTPATLFLLATA 393
>gi|145537418|ref|XP_001454423.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422183|emb|CAK87026.1| unnamed protein product [Paramecium tetraurelia]
Length = 537
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 121/334 (36%), Gaps = 27/334 (8%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
++ EE + E++ + + A W G+ L + + +I + ++++P D N
Sbjct: 161 KQYEEAIKCYNEAIYINPKDASAWQNKGITLYNLNQNEEAIECYNEAISINPKYVDAWNN 220
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVL----------- 252
GIA E++ +C+ + I + A N L L +Y +
Sbjct: 221 KGIALDDLNQYEEAIECYNEAISISPKYVDAWYNKGITLGNLNQYNEAIECYNEAISINP 280
Query: 253 AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 312
A A +G L A EC A+ +PK ++W N N + + +C
Sbjct: 281 KYAEAWNYKGITLGNLQQYEEAIECYNEAISINPKVDYVWFNKGNVLGNLNQYNEAIECY 340
Query: 313 EKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAW 372
+A + P +YA A + A R+ E+ NE SI +P E AW
Sbjct: 341 NEAISINP-----KYAEAWNNKGIALRNLNQYEEAFKCYNEAISI----NPKFAE---AW 388
Query: 373 --AGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKA 430
GF + A E ++ A + L + A EC A+
Sbjct: 389 YNKGFTLNNLNQFDEAIECFNEAISINPKYASAWYNKGITLRNLNQYEEAIECYNEAISI 448
Query: 431 DPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
+PK A W + A + + KC + + +
Sbjct: 449 NPKYAEAWNDKGIALRNLNQYEEAIKCYNEAISI 482
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 74/200 (37%), Gaps = 13/200 (6%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
++ EE + E++ + + VW G +L + +I + ++++P + N
Sbjct: 297 QQYEEAIECYNEAISINPKVDYVWFNKGNVLGNLNQYNEAIECYNEAISINPKYAEAWNN 356
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVL----------- 252
GIA E++ KC+ + I + A N L L ++ +
Sbjct: 357 KGIALRNLNQYEEAFKCYNEAISINPKFAEAWYNKGFTLNNLNQFDEAIECFNEAISINP 416
Query: 253 AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 312
A A +G L + A EC A+ +PK A W + A + + KC
Sbjct: 417 KYASAWYNKGITLRNLNQYEEAIECYNEAISINPKYAEAWNDKGIALRNLNQYEEAIKCY 476
Query: 313 EKAAKLEPNCMSTRYAVAVS 332
+A + P Y ++
Sbjct: 477 NEAISINPKFAEAWYNKGIT 496
>gi|189500702|ref|YP_001960172.1| hypothetical protein Cphamn1_1773 [Chlorobium phaeobacteroides BS1]
gi|189496143|gb|ACE04691.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides
BS1]
Length = 466
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 78/196 (39%), Gaps = 23/196 (11%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
E + L KL + T + ++ GLIL K R + S L LA++P+ + L
Sbjct: 118 EYKTALDKLDSILCDSTLEKEMYFYRGLILQKMERYRESEKYLEKCLALEPDFAEAWYEL 177
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G ME+SA C+Q I +D + A N +G L
Sbjct: 178 AFCKDVLGKMEESATCYQKTIDQDPYNVNAWYN---------------------KGLVLS 216
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
+ + A EC A+ + W N AN +TG + + K + EP+ ++
Sbjct: 217 KLKKYDDALECYDMAIAIADDFSSAWYNRANVLAITGKIEEAAESYLKTIEFEPDDINAL 276
Query: 327 Y--AVAVSRIKDAERS 340
Y +A ++D +++
Sbjct: 277 YNLGIAFEELEDYDKA 292
>gi|222622881|gb|EEE57013.1| hypothetical protein OsJ_06783 [Oryza sativa Japonica Group]
Length = 1004
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 15/163 (9%)
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
LG I + I+ LA+DPN +C GN+ A+ + GD++ + + + I
Sbjct: 118 LGAIYYQIRNYDMCIAKNEEALAIDPNFAECYGNMANAWKEKGDVDLAIRYYLTAIQLRP 177
Query: 232 NHPAALINYAALLLCKYGSVLAGA--------------GANTGEGACLDQASAVNVAKEC 277
N A N A+ K G + A A++ G + + A C
Sbjct: 178 NFCDAWSNLASAYTWK-GRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYNC 236
Query: 278 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
+ AL+ DP+ A W+NLA + GD + ++A KL+P
Sbjct: 237 YIEALRIDPQFAIAWSNLAGLFMEAGDLDKALLYYKEAVKLKP 279
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 86/203 (42%), Gaps = 16/203 (7%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E + + ++Q+ A+ + L I + G+L +I + + DP + N+G
Sbjct: 299 QEAIISYQRAVQARPDYAMAYGNLATIYYEQGQLDIAIRCYNQAIICDPQFVEAYNNMGN 358
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGA-------GANTGE 261
A +G ++++ C++ + NHP AL N + + ++ + A A +G
Sbjct: 359 ALKDAGRVKEAINCYRSCLALQANHPQALTNLGNIYM-EWNLISAAASFYKAAISVTSGL 417
Query: 262 GACLDQASAV-----NVAK--ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 314
+ L+ + + N A C L+ DP AA N N + G + + +
Sbjct: 418 SSPLNNLAVIYKQQGNYADAITCYTEVLRVDPTAADALVNRGNTFKEIGRVNEAIQDYIQ 477
Query: 315 AAKLEPNCMSTRYAVAVSRIKDA 337
AA + P M+ +A S KD+
Sbjct: 478 AATIRPT-MAEAHANLASAYKDS 499
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 112/268 (41%), Gaps = 46/268 (17%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL----SLVQIHHAQ 127
P A A+ G +Y+ +G +A+ SY++A + ARP+ +L I++ Q
Sbjct: 279 PSFADAYLNQGNVYKTMGMSQEAIISYQRAVQ---------ARPDYAMAYGNLATIYYEQ 329
Query: 128 CLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSIS 187
+L+ + +++ D + +N +G L +GR++ +I+
Sbjct: 330 ------------------GQLDIAIRCYNQAIICDPQFVEAYNNMGNALKDAGRVKEAIN 371
Query: 188 VLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALI---- 238
S LA+ N+ + NLG Y + + +A ++ I L + A+I
Sbjct: 372 CYRSCLALQANHPQALTNLGNIYMEWNLISAAASFYKAAISVTSGLSSPLNNLAVIYKQQ 431
Query: 239 -NYAALLLCKYGSVL----AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWA 293
NYA + C Y VL A A G + VN A + + A P A A
Sbjct: 432 GNYADAITC-YTEVLRVDPTAADALVNRGNTFKEIGRVNEAIQDYIQAATIRPTMAEAHA 490
Query: 294 NLANAYYLTGDHRSSGKCLEKAAKLEPN 321
NLA+AY +G ++ ++A +L P+
Sbjct: 491 NLASAYKDSGHVETAIVSYKQALRLRPD 518
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 75/192 (39%), Gaps = 24/192 (12%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
W+ L GRL + LA++P D NLG G ++++ C+ + +
Sbjct: 183 WSNLASAYTWKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYNCYIEALR 242
Query: 229 KDQNHPAALINYAALLL---------------CKYGSVLAGAGANTGEGACLDQASAVNV 273
D A N A L + K A A N G + + +
Sbjct: 243 IDPQFAIAWSNLAGLFMEAGDLDKALLYYKEAVKLKPSFADAYLNQG-----NVYKTMGM 297
Query: 274 AKECLLA---ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
++E +++ A++A P A + NLA YY G + +C +A +P + Y
Sbjct: 298 SQEAIISYQRAVQARPDYAMAYGNLATIYYEQGQLDIAIRCYNQAIICDPQFVEA-YNNM 356
Query: 331 VSRIKDAERSQE 342
+ +KDA R +E
Sbjct: 357 GNALKDAGRVKE 368
>gi|406887121|gb|EKD33989.1| hypothetical protein ACD_75C02516G0009 [uncultured bacterium]
Length = 209
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 25/180 (13%)
Query: 146 EELEEILSKLKESMQSDTRQ----AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCD 201
EEL+E L K+ E ++ ++ + ++ LGL+ +K+GR +I L + +D +
Sbjct: 3 EELQEDLPKVIEELEKKCKEHPKSVMAFHHLGLVYMKAGRTAEAIKALEKAIELDNLGSE 62
Query: 202 CIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGE 261
+ NLG YF G+++++ Q+L N A +N + A A+
Sbjct: 63 SMINLGAIYFGQGNLDKA----QEL-----NEQALSVNPES------------AQAHANL 101
Query: 262 GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
G Q S + A+K +P+ A W NL + + G+ + K +L+P+
Sbjct: 102 GLIWQQRSEFEKSIAAYEKAIKQNPQLASAWMNLTSVLTMKGEDARAVLAARKGLELDPD 161
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 74/167 (44%), Gaps = 21/167 (12%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 128
++ PK+ A LGL+Y + G+ +A+ + EKA E+ ++ +++L I+ Q
Sbjct: 21 KEHPKSVMAFHHLGLVYMKAGRTAEAIKALEKAIEL-----DNLGSESMINLGAIYFGQG 75
Query: 129 LLPESSGDNSLDKELEPE----------------ELEEILSKLKESMQSDTRQAVVWNTL 172
L ++ N + PE E E+ ++ +++++ + + A W L
Sbjct: 76 NLDKAQELNEQALSVNPESAQAHANLGLIWQQRSEFEKSIAAYEKAIKQNPQLASAWMNL 135
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 219
+L G ++ L +DP++ NL +A + GD ++
Sbjct: 136 TSVLTMKGEDARAVLAARKGLELDPDSPLGHNNLAVALYFCGDFSEA 182
>gi|433608140|ref|YP_007040509.1| hypothetical protein BN6_63930 [Saccharothrix espanaensis DSM
44229]
gi|407885993|emb|CCH33636.1| hypothetical protein BN6_63930 [Saccharothrix espanaensis DSM
44229]
Length = 691
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 15/160 (9%)
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
G++L + GR + +++ +L + P + NL + + GD+ ++ F ++ D
Sbjct: 477 GVLLRRLGRNEEAVAAFERVLPLTPPFPEVHYNLADVWLELGDVRRALAAFDYVLELDPG 536
Query: 233 HPAALINYAALLLCKYG-------SVLAGAGANTG-------EGACLDQASAVNVAKECL 278
H AL+N A+ L C+ G V AG + +G L +A A + +
Sbjct: 537 HVPALVNRAS-LRCEVGDSHGAWDDVRAGLALSPDNVHLLCVQGRLLVEAGDPRRASDVV 595
Query: 279 LAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 318
AAL+ADP A WA + GD + ++A L
Sbjct: 596 SAALRADPGFAPGWALRGQVRFEAGDFDGALTDFDRAVAL 635
>gi|323491541|ref|ZP_08096720.1| TPR repeat-containing protein [Vibrio brasiliensis LMG 20546]
gi|323314117|gb|EGA67202.1| TPR repeat-containing protein [Vibrio brasiliensis LMG 20546]
Length = 334
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 22/163 (13%)
Query: 176 LLKSGRLQSSISVLS-----SLLAV--DPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
L GR+ S L+ L+A+ +PNN + LGI Y ++GD+EQ F +
Sbjct: 87 LFNIGRIHQSRGNLALAEKAYLIAIEENPNNIKVLEQLGILYSRNGDIEQGTSYFMRAVN 146
Query: 229 KDQ---NHPAALIN--------YAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKEC 277
DQ N+ L N A L + K+ A G G D +A+
Sbjct: 147 ADQIRFNNNKTLSNNDLTTVESVAKLQVDKHSPEYALMGL----GVVADLNKDHELAQAF 202
Query: 278 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
AL DP + N+ ++Y+ GD+R + + + +A +P
Sbjct: 203 YKQALSIDPDSVKTLTNVGYSFYMAGDYRKAQRFILQALDKDP 245
>gi|255034468|ref|YP_003085089.1| hypothetical protein Dfer_0662 [Dyadobacter fermentans DSM 18053]
gi|254947224|gb|ACT91924.1| Tetratricopeptide TPR_2 repeat protein [Dyadobacter fermentans DSM
18053]
Length = 330
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 86/185 (46%), Gaps = 23/185 (12%)
Query: 157 ESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 216
E+ + D Q++ N G+IL +G+++ +I+ +A +P+N NLG A Q GD
Sbjct: 2 ENHEIDLSQSL--NNEGVILFLNGQIEEAIAKYRQAIAAEPDNASAHNNLGFALAQQGDF 59
Query: 217 EQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKE 276
EQ+++ ++ + D + +N G++ +G +G + +A+N+ ++
Sbjct: 60 EQASEHYRLSLELDPENDNTWLN--------LGNLKMMSGDYSGARDLFE--NALNITRD 109
Query: 277 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKD 336
A++W + A ++ D ++ ++A ++ P+ + ++ I D
Sbjct: 110 I-----------ANVWESYAKLMTISDDPSAAVNAWQQALRIHPHSPDYHLELGIALIAD 158
Query: 337 AERSQ 341
+ SQ
Sbjct: 159 GKHSQ 163
>gi|148678797|gb|EDL10744.1| cDNA sequence BC023818 [Mus musculus]
Length = 569
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 134/336 (39%), Gaps = 50/336 (14%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E+ EE + LKES++ A +++L +L + R + + + + + P++ D N
Sbjct: 249 EKTEEAIMLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDIYQAGIKNCPDSSDLHNN 308
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
+ SG E++ +Q I +H A++N G + G N+
Sbjct: 309 YAVFLVDSGFPEKAVAHYQQAIQLSPSHHVAVVNL--------GRLYRSLGENSK----- 355
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
A+E ALK + A + + L YY TG H+ + + +A L+P+
Sbjct: 356 --------AEEWYRRALKV-ARTAEVLSPLGALYYNTGRHKEALEVYREAVSLQPSQREL 406
Query: 326 RYAVA-----VSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQK 380
R A+A + + K+AE+ + S + +P +E + +A+
Sbjct: 407 RLALAQVLAVMGQTKEAEK--------------ITSHIVSEEPRCLE---CYRLLSAIHS 449
Query: 381 THHEVAAAFETEENELS-KMEECAGAGESAF-----LDQASAVNVAKECLLAALKADPKA 434
A E E L K ++ E F L + + ++ A E AA+ DP
Sbjct: 450 KQEHHGKALEAIEKALQLKPKDPKVISELFFTKGNQLREQNLLDKAFESYEAAVTLDPDQ 509
Query: 435 AHIWANLANAYYLTGDHRSSGKCLEKVLMVYCSSNL 470
A W N+ ++ G + S+ E+ L + S L
Sbjct: 510 AQAWMNMGGIRHIQGSYVSARAYYERALKLVPDSKL 545
>gi|115380381|ref|ZP_01467379.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
gi|310822651|ref|YP_003955009.1| tpr domain-containing protein [Stigmatella aurantiaca DW4/3-1]
gi|115362616|gb|EAU61853.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
gi|309395723|gb|ADO73182.1| TPR domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 622
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 22/155 (14%)
Query: 168 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS-AKCFQDL 226
++ L + GR + VL LA P + + LG+AY Q G ++Q+ A+ L
Sbjct: 427 LYEALATTRQRQGRPAEGVEVLREALAQHPRDEALLYALGVAYEQQGQVDQALAQMRAVL 486
Query: 227 ILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADP 286
++ N PA +N+ +L +G +A A+ +L AL P
Sbjct: 487 LVNPSNAPA--LNFLGYMLVLHGRDIAE-------------------AERLVLRALALRP 525
Query: 287 KAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
+ +L Y+ +++ + + LE+A++LEP+
Sbjct: 526 ETGAFLDSLGWIYFRRKEYQRAVETLERASQLEPD 560
>gi|17231874|ref|NP_488422.1| hypothetical protein all4382 [Nostoc sp. PCC 7120]
gi|17133518|dbj|BAB76081.1| all4382 [Nostoc sp. PCC 7120]
Length = 311
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 70/166 (42%), Gaps = 21/166 (12%)
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
GL +++GRLQ +I+ S + +DPN NLG+A Q+G ++ +A F D N
Sbjct: 52 GLQAIQAGRLQDAIAAFQSAIQLDPNLAAAHYNLGLALRQTGQLQPAADAFYRATQSDPN 111
Query: 233 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 292
A N GS+L EG L QA+ + L AL+ +P+
Sbjct: 112 FALAFANLG-------GSLL--------EGNNLQQAN------DYLQRALELEPRLGFAH 150
Query: 293 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAE 338
NL + + +KA +L N Y + +S ++ +
Sbjct: 151 YNLGLVRQQQQNWEGAIASFQKAVELSKNAPEPHYYLGISYLQQGK 196
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 67/185 (36%), Gaps = 21/185 (11%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+L+ + QSD A+ + LG LL+ LQ + L L ++P NL
Sbjct: 94 QLQPAADAFYRATQSDPNFALAFANLGGSLLEGNNLQQANDYLQRALELEPRLGFAHYNL 153
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G+ Q + E + FQ + +N P + G
Sbjct: 154 GLVRQQQQNWEGAIASFQKAVELSKNAPE---------------------PHYYLGISYL 192
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
Q +N AK A+K +P+ + + NL + G + + K+A+ PN +
Sbjct: 193 QQGKLNEAKNAFNQAIKINPRYSEAYYNLGVVLFNQGQPQEALTAFRKSAEANPNYPNAY 252
Query: 327 YAVAV 331
Y +
Sbjct: 253 YGAGL 257
>gi|124024101|ref|YP_001018408.1| hypothetical protein P9303_24101 [Prochlorococcus marinus str. MIT
9303]
gi|123964387|gb|ABM79143.1| Hypothetical protein P9303_24101 [Prochlorococcus marinus str. MIT
9303]
Length = 725
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 86/191 (45%), Gaps = 27/191 (14%)
Query: 54 EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIA 113
EE ++S + + P A A+F LGL+ + G +A++SY KA E+
Sbjct: 227 EEAIASYRKAI----EVKPDFADAYFALGLVMKEEGDVEEAIASYRKAIEV--------- 273
Query: 114 RPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLG 173
+P+ + A L+ + GD +EE ++ +++++ A + LG
Sbjct: 274 KPDF---ADAYFALGLVMKEEGD-----------VEEAIASYRKAIEVKPDFADAYFALG 319
Query: 174 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNH 233
L++ + G ++ +I+ + V P+ D LG+ + GD+E++ ++ I +
Sbjct: 320 LVMKEEGDVEEAIASYRKAIEVKPDFADAYFALGLVMKEEGDVEEAIASYRKAIEVKPDF 379
Query: 234 PAALINYAALL 244
A +N +L
Sbjct: 380 ADAYLNLGNVL 390
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 79/173 (45%), Gaps = 27/173 (15%)
Query: 54 EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIA 113
EE ++S + + P A A+F LGL+ + G +A++SY KA E+
Sbjct: 261 EEAIASYRKAI----EVKPDFADAYFALGLVMKEEGDVEEAIASYRKAIEV--------- 307
Query: 114 RPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLG 173
+P+ + A L+ + GD +EE ++ +++++ A + LG
Sbjct: 308 KPDF---ADAYFALGLVMKEEGD-----------VEEAIASYRKAIEVKPDFADAYFALG 353
Query: 174 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDL 226
L++ + G ++ +I+ + V P+ D NLG + G+++++ + L
Sbjct: 354 LVMKEEGDVEEAIASYRKAIEVKPDFADAYLNLGNVLKEEGEIDEARQIITTL 406
>gi|405973294|gb|EKC38016.1| Bardet-Biedl syndrome 4 protein [Crassostrea gigas]
Length = 583
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 66/157 (42%), Gaps = 21/157 (13%)
Query: 164 RQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 223
R + + LG I L G ++++I + + P N D + LG+ Y Q G +++ +
Sbjct: 190 RHEISYVMLGKIHLMEGNIEAAIEIYKQAVEYSPENPDMLTTLGLLYMQVGQYQRAFENL 249
Query: 224 QDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALK 283
+ + D +H A+++ G+ + +VA A
Sbjct: 250 GNAMTYDPSHVKAIMS---------------------AGSMMQTHGDFDVALNKYRIAAV 288
Query: 284 ADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
A P++ +W N+ A++ + ++ CL++A L P
Sbjct: 289 ATPESPPLWNNIGMAFFGKKKYVAAISCLKRANYLAP 325
>gi|315637376|ref|ZP_07892591.1| conserved hypothetical protein [Arcobacter butzleri JV22]
gi|315478350|gb|EFU69068.1| conserved hypothetical protein [Arcobacter butzleri JV22]
Length = 503
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 23/189 (12%)
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
E E++E +E+++ D + + +N L L+L G + + + + +D N +
Sbjct: 316 EKGEMDEAEKLFREAIKIDDKNSNTYNNLALLLKNKGEIDEAEKLYREAIKIDDKNSNTY 375
Query: 204 GNLGIAYFQSGDMEQSAKCFQDLI-LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 262
NL + G+++++ K +++ I + D+N A N A LL + G + GE
Sbjct: 376 NNLALLLANKGEIDEAEKLYKEAIKIDDKNSKAY--NNLAFLLSEKGEI--------GE- 424
Query: 263 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
A++ A+K D K + I+ NLA GD + K +A K++
Sbjct: 425 -----------AEKLYREAIKIDDKDSDIYYNLALLLKNKGDIDEAEKLYREAIKIDDKD 473
Query: 323 MSTRYAVAV 331
+ +AV
Sbjct: 474 LDVYNNLAV 482
>gi|194578961|ref|NP_001124099.1| tetratricopeptide repeat protein 13 precursor [Danio rerio]
gi|190338937|gb|AAI63293.1| Zgc:194598 [Danio rerio]
Length = 826
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
+ ++S++ Q + GL G L+ +I V L + + D +LG AY
Sbjct: 235 MEDFQQSLELKKNQPIAMLYKGLTFFHRGLLKEAIEVFKEALKLKSDFIDAYKSLGQAYR 294
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAG 256
+ GD+E + + FQ +L DQNH +L ++L +GS+ G
Sbjct: 295 ELGDIENAMESFQKALLLDQNHIQSL-QLRGMMLYHHGSLQEAIG 338
>gi|356601809|gb|AET24906.1| magnetosome protein [Candidatus Desulfamplus magnetomortis BW-1]
Length = 249
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
Query: 178 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL 237
+ G + + L +++ +D + D I LG+AY ++G + + K ++ +I ++ A
Sbjct: 92 QKGDTKKCVEFLENVVRIDNRDADIIYRLGVAYEKNGQPDSAIKAYKKVISLAPDNAKAH 151
Query: 238 INYAALLLCK--YGSVLA-----------GAGANTGEGACLDQASAVNVAKECLLAALKA 284
A LL+ K Y + L A N G D+ + A E A++
Sbjct: 152 YRKAVLLIKKQDYENALTDLEEAIQEKPDSAELNFRLGQVNDRLKNYDKAIEYFTRAVEL 211
Query: 285 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLE 319
+P+ + N+A Y DH S KCL++A ++E
Sbjct: 212 NPQFLAAFKNMALTYDSLNDHEGSLKCLKRALEIE 246
>gi|158522430|ref|YP_001530300.1| hypothetical protein Dole_2419 [Desulfococcus oleovorans Hxd3]
gi|158511256|gb|ABW68223.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
Hxd3]
Length = 792
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
WN LGL L +G + +++ ++ L +DP+ + NLG+ Y +G +++ +CF+++I
Sbjct: 428 WNNLGLALRTAGLSEEALTAFNTALTLDPHYTEARNNLGVLYQHTGKTQKAVQCFENVIK 487
Query: 229 KDQNHPAALINYAALLL 245
+ +N +LL
Sbjct: 488 LNPGFAPGYLNMGKVLL 504
>gi|384534193|ref|YP_005716857.1| FecR protein [Sinorhizobium meliloti BL225C]
gi|333816369|gb|AEG09036.1| FecR protein [Sinorhizobium meliloti BL225C]
Length = 1202
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 21/175 (12%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+LE L+ L+ ++++ + +WN+LGL+ G +++ + +A+DP + NL
Sbjct: 423 DLEGALADLERALKTAPGSSSIWNSLGLVQGARGDNRAAEAAFKQAIALDPLDPVSHANL 482
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
I Y M ++ + + D + AL+ G
Sbjct: 483 AIQYMDEMRMAEAKREIDTALSVDPSFDVALV---------------------ARGRYHM 521
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
Q + A E LLA A+P ++ LA A+Y GD + + L+ A +L+PN
Sbjct: 522 QNGEADKAVEDLLAGSTANPAYSNAQLLLAAAHYEKGDRIPAAQALDNADRLDPN 576
>gi|198422562|ref|XP_002123464.1| PREDICTED: similar to tetratricopeptide repeat domain 8 isoform 3
[Ciona intestinalis]
Length = 468
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 101/253 (39%), Gaps = 42/253 (16%)
Query: 79 FLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNS 138
LLG +YQR+ QPL+++++Y++ E + D R L+++ ++H
Sbjct: 216 LLLGKVYQRMDQPLQSIATYKQGLE---KFPDD--RSLLVAIARVHD------------- 257
Query: 139 LDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPN 198
E +L++ K+ +++D ++ + + + SI + LL + +
Sbjct: 258 -----EMGQLDDATKWYKDVLETDGVNVEAIASIAANYFYTDQPEISIRLYRRLLQMGIH 312
Query: 199 NCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGAN 258
N + NLG+ + + + + CF + ++ + Y V G G N
Sbjct: 313 NVELFNNLGLCCYFAQQYDMTMNCFDRALSLAEDEQLGDVWY------NISHVALGIGDN 366
Query: 259 TGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 318
N+A +CL A+ AD + NLA GD + L AA+L
Sbjct: 367 -------------NLAYQCLRLAIAADNGHTEAYNNLAVLELRRGDVERAKSLLRSAAEL 413
Query: 319 EPNCMSTRYAVAV 331
P+ Y +A
Sbjct: 414 APHAYEHHYNLAT 426
>gi|198422560|ref|XP_002123334.1| PREDICTED: similar to tetratricopeptide repeat domain 8 isoform 2
[Ciona intestinalis]
Length = 509
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 101/253 (39%), Gaps = 42/253 (16%)
Query: 79 FLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNS 138
LLG +YQR+ QPL+++++Y++ E + D R L+++ ++H
Sbjct: 257 LLLGKVYQRMDQPLQSIATYKQGLE---KFPDD--RSLLVAIARVHD------------- 298
Query: 139 LDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPN 198
E +L++ K+ +++D ++ + + + SI + LL + +
Sbjct: 299 -----EMGQLDDATKWYKDVLETDGVNVEAIASIAANYFYTDQPEISIRLYRRLLQMGIH 353
Query: 199 NCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGAN 258
N + NLG+ + + + + CF + ++ + Y V G G N
Sbjct: 354 NVELFNNLGLCCYFAQQYDMTMNCFDRALSLAEDEQLGDVWY------NISHVALGIGDN 407
Query: 259 TGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 318
N+A +CL A+ AD + NLA GD + L AA+L
Sbjct: 408 -------------NLAYQCLRLAIAADNGHTEAYNNLAVLELRRGDVERAKSLLRSAAEL 454
Query: 319 EPNCMSTRYAVAV 331
P+ Y +A
Sbjct: 455 APHAYEHHYNLAT 467
>gi|88604422|ref|YP_504600.1| hypothetical protein Mhun_3199 [Methanospirillum hungatei JF-1]
gi|88189884|gb|ABD42881.1| TPR repeat [Methanospirillum hungatei JF-1]
Length = 565
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 71/179 (39%), Gaps = 23/179 (12%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
E L+ ++ D + A W G + G +I L S L +DP+N +G
Sbjct: 171 REALAWFIKATTYDQKNAPAWYFTGTTYTELGNYAQAIDALQSALTLDPSNAGAYYEMGR 230
Query: 209 AYFQSGDMEQSAKCFQDLI-LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 267
AY + G+ + ++ I L N + YG LA +G D
Sbjct: 231 AYEKLGNRTAARNYYETAIKLNPDNVWTRFV---------YGKNLAISG---------DY 272
Query: 268 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
SA+ KE L +LK A W LANAYY TG + + + + A ++P R
Sbjct: 273 ESAI---KE-LKTSLKGSSCQASAWYELANAYYQTGQYDQALEAINSALTIDPYTKEYR 327
>gi|113478010|ref|YP_724071.1| hypothetical protein Tery_4626 [Trichodesmium erythraeum IMS101]
gi|110169058|gb|ABG53598.1| TPR repeat [Trichodesmium erythraeum IMS101]
Length = 452
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 64/171 (37%), Gaps = 21/171 (12%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
+E +S ++Q A WN G+ L++ Q +I+ + V P+ D N G
Sbjct: 274 FDEAISSYDRALQIRADYADAWNNRGVCLIELQHYQEAINSFEQGIKVKPDYADAWNNRG 333
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 267
+ + +++ K + N A+ N YG A GACL +
Sbjct: 334 VCLAKIQKYQEAVKSY--------NQAIAIKN-------DYGD------AWNNRGACLMK 372
Query: 268 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 318
A C A+K P W N A Y L GD + K EKA L
Sbjct: 373 LGIYGEAIACFDNAVKIQPDFFSAWYNQARCYSLKGDVDMALKSFEKAVSL 423
>gi|118395435|ref|XP_001030067.1| SLEI family protein [Tetrahymena thermophila]
gi|89284355|gb|EAR82404.1| SLEI family protein [Tetrahymena thermophila SB210]
Length = 2406
Score = 48.1 bits (113), Expect = 0.008, Method: Composition-based stats.
Identities = 54/251 (21%), Positives = 102/251 (40%), Gaps = 40/251 (15%)
Query: 71 MPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLL 130
+PK A H+ LG +YQ +A+ SY+ A E+ + + +Q+
Sbjct: 1696 VPKCAETHYHLGRVYQDQNMLDEAIGSYQNAIEL--------DSKYIDAYIQL------- 1740
Query: 131 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
G+ LDK + ++ L K+ ++ D ++ V +N +GL+ ++ +
Sbjct: 1741 ----GNAYLDKPM----FDQALETYKKILEIDPQKPVAYNNIGLVYFDQNMNDEALEQFN 1792
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 250
L ++P + N G+AY + E++ +C+ ++ + +L ALL S
Sbjct: 1793 KALEINPKYELSLYNSGLAYERKNQTEKALECYNKVLEINPTESRSLARKIALLKKNNSS 1852
Query: 251 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGK 310
NTG D + + A N A YY+ + S +
Sbjct: 1853 -------NTGFDFLKDLQDKFGPSYK----------STAEEKFNQAFHYYMQMEDDKSIE 1895
Query: 311 CLEKAAKLEPN 321
CL+KA +++PN
Sbjct: 1896 CLKKAIEIDPN 1906
Score = 45.8 bits (107), Expect = 0.051, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 84/189 (44%), Gaps = 21/189 (11%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
L+ + +EE + L+++++ D + A LG K +I L + +DPN +
Sbjct: 83 LQKKMIEEAVVCLQKALEIDPKSAKAHERLGFAYKKQNLTDKAIDCLKKAIEIDPNFTEA 142
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 262
NLG Y ++Q+ C+++++ D N+ A I+ A +Y + E
Sbjct: 143 HHNLGFTYESKKMIDQAYDCYKNILNIDPNYVKAYISLARNYYIEYKT----------ED 192
Query: 263 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
+ A+ + + C ++A + +I+ N++ S K +KA +++PN
Sbjct: 193 SIKYLKKAIEMDQNC----VEAYERLGYIYQNISK-------KEESIKYFKKAIEIDPNY 241
Query: 323 MSTRYAVAV 331
+ ++ + +
Sbjct: 242 FNAQFNLGL 250
Score = 44.7 bits (104), Expect = 0.099, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 68/173 (39%), Gaps = 25/173 (14%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E + LK++++ D + + ++ LGL+ ++ + + +I + PNN DCI L
Sbjct: 2174 QECIKCLKKAIEIDPKYSEAYDKLGLVYEENEQFEEAIECYKKAIEHKPNNLDCISALMT 2233
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
Y M AK F Y SV A G +
Sbjct: 2234 IYINQ-KMTDEAKEF------------------------YNSVSQSADIYYELGRVYEDK 2268
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
S V+ A A++ DPK + + L N Y + + + +K ++EPN
Sbjct: 2269 SMVDEAISSHKKAIELDPKYVNSYIQLGNIYSEKASYEQAIEYFQKILEIEPN 2321
Score = 43.9 bits (102), Expect = 0.17, Method: Composition-based stats.
Identities = 43/187 (22%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 135 GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLA 194
G+ LDK L + +E ++ ++ D+ ++V +N +GLI L+ L ++ + +
Sbjct: 1475 GNAYLDKPLYDQAME----CYQKIIEIDSTKSVAYNNIGLIYLRQNMLDEALEQFNKAIE 1530
Query: 195 VDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAG 254
+DP I N G+ Y + +++ +C+ + + +PA +Y + SVL
Sbjct: 1531 IDPKYVLSIYNSGLVYEKKQQKDKALECYNKAL---EINPAHKNSYNRI------SVLKK 1581
Query: 255 AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 314
+G E +Q +N+ + A + YY + S KCL K
Sbjct: 1582 SGKQAQETDKEEQ-QEINL-------------QTAKDYYEEGYKYYTELNDDESIKCLNK 1627
Query: 315 AAKLEPN 321
A +L+PN
Sbjct: 1628 AIELDPN 1634
Score = 41.2 bits (95), Expect = 1.2, Method: Composition-based stats.
Identities = 65/318 (20%), Positives = 125/318 (39%), Gaps = 20/318 (6%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
E ++ L ++ +Q + ++AV +N +GL+ K +I + L +DPN N
Sbjct: 2021 EYDQALECYQKIIQINPQKAVAYNNIGLVHYKQKMDDKAIEYYNKALELDPNYDLSYYNS 2080
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G+ Y Q D +++ +C++ +L+ +N L+ G + A EG+ +
Sbjct: 2081 GLVYEQKKDFDKALECYKK-VLQINPKDKKTLNRINLIKKNNGDKIDNQ-AQEDEGSEPE 2138
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
+ K D + A + N YY + KCL+KA +++P +
Sbjct: 2139 DYDDDYEDGD----EQKKDLQTAEDYYNQGFKYYNQMKDQECIKCLKKAIEIDP-----K 2189
Query: 327 YAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVA 386
Y+ A ++ E E+ E E P ++ A QK E
Sbjct: 2190 YSEAYDKLGLVYEENEQFEE----AIECYKKAIEHKPNNLDCISALMTIYINQKMTDEAK 2245
Query: 387 AAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 446
+ N +S+ + + D+ S V+ A A++ DPK + + L N Y
Sbjct: 2246 EFY----NSVSQSADIYYELGRVYEDK-SMVDEAISSHKKAIELDPKYVNSYIQLGNIYS 2300
Query: 447 LTGDHRSSGKCLEKVLMV 464
+ + + +K+L +
Sbjct: 2301 EKASYEQAIEYFQKILEI 2318
Score = 40.8 bits (94), Expect = 1.4, Method: Composition-based stats.
Identities = 59/278 (21%), Positives = 105/278 (37%), Gaps = 42/278 (15%)
Query: 71 MPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLL 130
+PK A++ LG Y+ A+ +Y+KA +Q+ +
Sbjct: 1156 VPKCTEAYYELGRTYEEQNMLDDAIVNYKKA-------------------IQLDPSHINS 1196
Query: 131 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
G++ LDK + + L K+ ++ D ++AV +N +G++ K G +++
Sbjct: 1197 YIYLGNSYLDKL----QFDLALDSYKKIIEIDPKKAVAYNNVGVVYNKQGLYDAALEYYK 1252
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 250
L VDP+ + N G+ Y + G+ +++ + F + + +L + K S
Sbjct: 1253 KALDVDPHYELALFNSGLVYEKKGEQDKALEFFYKTLEINPTEKKSLNRIKVIQQNKQTS 1312
Query: 251 -------------------VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 291
VL+ A EG Q + A ECL AL+ DP
Sbjct: 1313 KDDKEFSLFKDLFKNDKKKVLSTADDYYYEGLVYYQQQNDDKAIECLKKALELDPNFYEA 1372
Query: 292 WANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAV 329
+ L Y + S +KA +L P S V
Sbjct: 1373 YDKLGLVYKVKKMFDESIIHYKKALELNPKFYSAMETV 1410
Score = 40.8 bits (94), Expect = 1.4, Method: Composition-based stats.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 25/184 (13%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL----SLVQIHHAQ 127
PK + A+ LGL+Y+ Q +A+ Y+KA E +P L +L+ I+ Q
Sbjct: 2188 PKYSEAYDKLGLVYEENEQFEEAIECYKKAIE---------HKPNNLDCISALMTIYINQ 2238
Query: 128 CLLPES-----SGDNSLDKELE-------PEELEEILSKLKESMQSDTRQAVVWNTLGLI 175
+ E+ S S D E ++E +S K++++ D + + LG I
Sbjct: 2239 KMTDEAKEFYNSVSQSADIYYELGRVYEDKSMVDEAISSHKKAIELDPKYVNSYIQLGNI 2298
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
+ + +I +L ++PNN N+G+ Y+ G +Q+ + + + + +
Sbjct: 2299 YSEKASYEQAIEYFQKILEIEPNNEIAYNNIGLIYYDQGKYDQALEQYNKALEINPKYEL 2358
Query: 236 ALIN 239
+L N
Sbjct: 2359 SLYN 2362
Score = 40.4 bits (93), Expect = 1.9, Method: Composition-based stats.
Identities = 55/250 (22%), Positives = 95/250 (38%), Gaps = 55/250 (22%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
PK A LGL+ Q + Q +A+ Y A E+ +C +P L L I+ A+
Sbjct: 643 PKYTQAFCNLGLLNQAIKQMEEAIRFYLAAIELDPKC----LKP-YLGLGSIYSAK---- 693
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
G N E+ L ++ + D A +N++G + L ++ L
Sbjct: 694 ---GIN-----------EKALECFSKAQEIDANNAETFNSIGFMYYNWKILDQALDNLKK 739
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 251
L ++PN I N G+ Y Q +++ +C+Q ++ N A +
Sbjct: 740 ALEINPNYELAIYNTGLVYEQKKQNDKALECYQKVLQIKPNDKKAKVR------------ 787
Query: 252 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 311
+ Q + N ++ PK A + YY+ S +C
Sbjct: 788 -------------IFQINQKNQQED-------KTPKTAKEFYQQGYKYYIQLKDEQSIEC 827
Query: 312 LEKAAKLEPN 321
L+KA +L+PN
Sbjct: 828 LQKALELDPN 837
Score = 39.3 bits (90), Expect = 4.8, Method: Composition-based stats.
Identities = 84/420 (20%), Positives = 151/420 (35%), Gaps = 74/420 (17%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
PK+A AH LG Y++ KA+ +KA EI P + + HH
Sbjct: 103 PKSAKAHERLGFAYKKQNLTDKAIDCLKKAIEI---------DP---NFTEAHHNLGFTY 150
Query: 132 ESSG--DNSLD-----KELEPE----------------ELEEILSKLKESMQSDTRQAVV 168
ES D + D ++P + E+ + LK++++ D
Sbjct: 151 ESKKMIDQAYDCYKNILNIDPNYVKAYISLARNYYIEYKTEDSIKYLKKAIEMDQNCVEA 210
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
+ LG I + + SI + +DPN + NLG+ Y+Q ++ FQ I
Sbjct: 211 YERLGYIYQNISKKEESIKYFKKAIEIDPNYFNAQFNLGLLYYQEQKDNEALTYFQKAI- 269
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ +P + +Y + L Y + A E AL +P
Sbjct: 270 --EINPKSSDSYNNIGLVYY------------------HKDMITEALEYFKKALDVNPLY 309
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLS 348
N AY +++ + +K+ ++ P ++ +++ + D Q LS
Sbjct: 310 YKAHHNSGLAYAKQNLIQNAIESYKKSIEINP-----KFLKSLTNLGDLCVKQ----NLS 360
Query: 349 WAGNEMASILREGDPVQIEPPIAW----AGFAAVQKTHHEVAAAFETEENELSKMEECAG 404
G E + +QI P + GF K +E A + ELS A
Sbjct: 361 DEGIECFKKI-----IQINPKSHYDYFQLGFLYQNKDMNEEAVKAYKKVIELSPQYTNAH 415
Query: 405 AGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
+ + A+ C ++ DP + + A Y L G+ + +C +K++ +
Sbjct: 416 INLGVIYFKQKMFDEAQACFKKVIQIDPNCWNAYYRSAEVYQLKGNTTEAIECYKKIIEI 475
>gi|227820344|ref|YP_002824315.1| TonB-dependent receptor [Sinorhizobium fredii NGR234]
gi|227339343|gb|ACP23562.1| putative exported protein, TonB-dependent receptor protein
[Sinorhizobium fredii NGR234]
Length = 1198
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 71/175 (40%), Gaps = 21/175 (12%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+LE L+ L+ ++++ +WN +G++ G +++ + +DP + + NL
Sbjct: 423 DLEGALADLQRALETAPGSPTIWNAIGIVQGDRGDNRAAERAFKKAIELDPADPNYHANL 482
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
I Y + ++ + + D + L+ L
Sbjct: 483 AIQYLGELRVAEAKREIDAALAVDPSFDIVLVARGWYQL--------------------- 521
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
Q V A E LLA A+P A LA AYY GDH + + L+ A +L+PN
Sbjct: 522 QNGDVEKAVEDLLAGSTANPAFAGAQMLLAAAYYEKGDHGPAAQALDSADRLDPN 576
>gi|433610413|ref|YP_007193874.1| Flp pilus assembly protein TadD, contains TPR repeats
[Sinorhizobium meliloti GR4]
gi|429555355|gb|AGA10275.1| Flp pilus assembly protein TadD, contains TPR repeats
[Sinorhizobium meliloti GR4]
Length = 1202
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 21/175 (12%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+LE L+ L+ ++++ + +WN+LGL+ G +++ + +A+DP + NL
Sbjct: 423 DLEGALADLERALKTAPGSSSIWNSLGLVQGARGDNRAAEAAFKQAIALDPLDPVSHANL 482
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
I Y M ++ + + D + AL+ G
Sbjct: 483 AIQYMDEMRMAEAKREIDTALSVDPSFDVALV---------------------ARGRYHM 521
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
Q + A E LLA A+P ++ LA A+Y GD + + L+ A +L+PN
Sbjct: 522 QNGEADKAVEDLLAGSTANPAYSNAQLLLAAAHYEKGDRIPAAQALDNADRLDPN 576
>gi|322795771|gb|EFZ18450.1| hypothetical protein SINV_10406 [Solenopsis invicta]
Length = 1301
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 82/195 (42%), Gaps = 30/195 (15%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E EE ++ L+ ++++ W G I S+ + + +D NN +C+
Sbjct: 430 ERYEEAINALELALENSE----AWLLFGKIYWDMRDYNHSLMAFLNGVQMDRNNWECMVY 485
Query: 206 LGIAYFQ-SGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGAN------ 258
LG Y + + D+E+S KC+ + + N A I L +L AN
Sbjct: 486 LGHYYREHNNDLERSRKCYHAALQINPNSEEAGIG-----LSTTYRLLKNTDANIQLLQK 540
Query: 259 -TGEGA------------CLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDH 305
T +G LDQ A A L ++ADP H W +LA+AY + G H
Sbjct: 541 VTMQGTGPRWAWLQLGLHYLDQGDA-GQAITALQHVIRADPNDNHSWESLADAYLVRGAH 599
Query: 306 RSSGKCLEKAAKLEP 320
S+ K ++A +L P
Sbjct: 600 TSALKSYQRALQLSP 614
>gi|20090471|ref|NP_616546.1| hypothetical protein MA1613 [Methanosarcina acetivorans C2A]
gi|19915489|gb|AAM05026.1| TPR-domain containing protein [Methanosarcina acetivorans C2A]
Length = 1885
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 73/182 (40%), Gaps = 27/182 (14%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
LE E+L+E L +++ + + L+K R+Q S+ +L + P N D
Sbjct: 1673 LELEDLKEALKAFEKAALFNPKNEEALYNAATTLIKLNRIQESLGYFDRILEISPENYDA 1732
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 262
+ G+A+ ++ K F +++ KD N+ A+ N +
Sbjct: 1733 MNYKGVAFCMLEQYREALKSFDNVLKKDPNNIKAVYNVGVV------------------- 1773
Query: 263 ACLDQA---SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLE 319
C Q +A KE L +P ++ +LA TGD+ + K EK +++
Sbjct: 1774 -CFKQKLYETAARAFKEALTINPWHEPSLRYLGLSLAK----TGDYEDALKAFEKLLRIK 1828
Query: 320 PN 321
P
Sbjct: 1829 PQ 1830
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 72/178 (40%), Gaps = 22/178 (12%)
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
GL L+K R + +I+ + +L DP++ + + + G+A ++ +++ F D + +
Sbjct: 12 GLDLVKRKRYEKAINTFNKILDKDPDHKEALFHRGLALLETEKTQEALDSFNDALQLEPG 71
Query: 233 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 292
+ AL +G C A E +AL++ P IW
Sbjct: 72 NSDALYR---------------------KGTCFAALGRFEEALEAYESALESSPDTPEIW 110
Query: 293 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWA 350
+ A+ +S C EKA +L+P + A+ K AER +E E A
Sbjct: 111 YMMGLAFAEMERAEASILCFEKALELKPEYTAACCAMGTVAGK-AERYEEALEDFERA 167
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 24/189 (12%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P+ A + +G+ +LG+ +A + +KA EI P L I++ L
Sbjct: 945 PQFAEGWYFIGMSCSKLGKHEEASKALKKALEI---------DPAFRDLHDIYYRLGLSC 995
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQS--DTRQAVVWNTLGLILLKSGRLQSSISVL 189
G+ ++ L+ EE LS + E+ + D Q +++ L LL+ GR + S
Sbjct: 996 FELGN--FEEALKA--FEEALSTVPENSERNPDEAQDIMYKK-SLSLLRLGRYAEAESGF 1050
Query: 190 SSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYG 249
+LA+DP N + + +L A F+ G +++ + F+ ++ +PA +L + G
Sbjct: 1051 KEVLALDPANTEALAHLSTACFKKGHYKEALEIFERVL---SQNPA-----RKTILFRKG 1102
Query: 250 SVLAGAGAN 258
L G N
Sbjct: 1103 LALKAFGKN 1111
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E+ E L ++ D +G++ K +++ L ++P + +
Sbjct: 1744 EQYREALKSFDNVLKKDPNNIKAVYNVGVVCFKQKLYETAARAFKEALTINPWHEPSLRY 1803
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLC---KYGSVL 252
LG++ ++GD E + K F+ L+ P A+ NY +LL KYG +
Sbjct: 1804 LGLSLAKTGDYEDALKAFEKLLRIKPQDPQAM-NYRGVLLGKLEKYGEAI 1852
>gi|196234492|ref|ZP_03133317.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
gi|196221473|gb|EDY16018.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
Length = 333
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%)
Query: 171 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 230
TLG++ G+ +IS L+ +AVD N LG+ + Q G EQ+ + F+ I D
Sbjct: 182 TLGIVYYTQGKYDVAISELNKAIAVDGKNATAHNYLGVTWSQKGHQEQAQREFETAIALD 241
Query: 231 QNHPAALINYAALLLCK 247
N+ A N A LL K
Sbjct: 242 PNYADADYNLAVLLATK 258
>gi|83814061|ref|YP_446792.1| hypothetical protein SRU_2700 [Salinibacter ruber DSM 13855]
gi|83755455|gb|ABC43568.1| TPR repeat protein [Salinibacter ruber DSM 13855]
Length = 554
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 147/388 (37%), Gaps = 50/388 (12%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P + A G++ LG+P +A+ +YE+A D+ + +L+ + +
Sbjct: 153 PYTSDAWMRRGILLNNLGRPEEALEAYEQA--------LDVNPTDTETLINL----GITL 200
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+S G ++E L E++ + LG+ L + +L++++
Sbjct: 201 DSLG-----------RVDEALEAYDEALSINPLHGEALFNLGVTLERDEQLEAAVEAFQR 249
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYG 249
V P + + LG Y + G+ E+S + + + + D A N +L L ++G
Sbjct: 250 CADVYPEHPEVWYELGYCYDRLGEDEKSVEAYDNHLDIDPYSKDAWYNRGIVLNRLGRFG 309
Query: 250 SVLAG-----------AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANA 298
+ A A G + A E L+ + A + NLA A
Sbjct: 310 EAVESYDMALAIHDEFASAYYNRGNAEANQGDLEAAVESYERVLELEGPDAATYYNLALA 369
Query: 299 YYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASIL 358
Y GD R++ EK L+ N Y + D ER +E E +A N A++
Sbjct: 370 YEEQGDLRAARTYYEKTLDLKSNYPEAWYGLGCCFDTD-ERPEEALECFRYAVNLDANV- 427
Query: 359 REGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEEN--ELSKMEECAGAGESAFLDQASA 416
P W A ++ A E+ ++ L + E A G + L +
Sbjct: 428 ----------PKFWTARADCAYKVGKLDEALESYQHAVRLDESNEHAWTGYAETLLEKEQ 477
Query: 417 VNVAKECLLAALKADPKAAHIWANLANA 444
A E AL+ DPK+A+ + A A
Sbjct: 478 PEEALEAYRQALELDPKSANTYFRQAKA 505
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 34/194 (17%), Positives = 71/194 (36%), Gaps = 23/194 (11%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
E E+E L + ++ + W G++L GR + ++ L V+P + +
Sbjct: 133 FEEGEMETALEVIDRLIELHPYTSDAWMRRGILLNNLGRPEEALEAYEQALDVNPTDTET 192
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 262
+ NLGI G ++++ + + + + + H AL N G
Sbjct: 193 LINLGITLDSLGRVDEALEAYDEALSINPLHGEALFNL---------------------G 231
Query: 263 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
L++ + A E P+ +W L Y G+ S + + ++P
Sbjct: 232 VTLERDEQLEAAVEAFQRCADVYPEHPEVWYELGYCYDRLGEDEKSVEAYDNHLDIDPYS 291
Query: 323 MSTRY--AVAVSRI 334
Y + ++R+
Sbjct: 292 KDAWYNRGIVLNRL 305
>gi|386876076|ref|ZP_10118214.1| tetratricopeptide repeat protein [Candidatus Nitrosopumilus salaria
BD31]
gi|386806122|gb|EIJ65603.1| tetratricopeptide repeat protein [Candidatus Nitrosopumilus salaria
BD31]
Length = 297
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 101/271 (37%), Gaps = 54/271 (19%)
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
G+ L+ G+ ++ V L +DPNN + N G+A + G +++ +CF I + N
Sbjct: 11 GVALVNQGKYHKALKVYDKALNIDPNNWNVWYNKGVALDELGRNDEALECFNQAIQINPN 70
Query: 233 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 292
A N G L G N DQ +K DP A W
Sbjct: 71 DAWAWSN--------KGITLGKLGRNDEAVMAFDQ-------------EIKIDPNDAA-W 108
Query: 293 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS--TRYAVAVSRI-KDAERSQEPTEQLSW 349
N A G + + +C +A ++ PN +S + + + +I K+ ER
Sbjct: 109 YNRGMALDNLGRNDEALECFNQAIQINPNNLSACVKKDITLDKIGKNVER---------- 158
Query: 350 AGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFE--TEENELSKMEECAGAGE 407
EM + W + ++ A E E ++S+ +
Sbjct: 159 ---EMVRM--------------WTNKGVALEKIDKLNEALECYDEALKISRNYMWPWDNK 201
Query: 408 SAFLDQASAVNVAKECLLAALKADPKAAHIW 438
L++ + +N A EC A++ +P A +W
Sbjct: 202 GIILNKLNRINEALECFNQAIQINPNDATVW 232
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 4/175 (2%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E L +++Q + A W+ G+ L K GR ++ + +DPN+ N G+
Sbjct: 55 DEALECFNQAIQINPNDAWAWSNKGITLGKLGRNDEAVMAFDQEIKIDPNDA-AWYNRGM 113
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGAN--TGEGACLD 266
A G +++ +CF I + N+ +A + + L K G + T +G L+
Sbjct: 114 ALDNLGRNDEALECFNQAIQINPNNLSACV-KKDITLDKIGKNVEREMVRMWTNKGVALE 172
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
+ +N A EC ALK W N + +C +A ++ PN
Sbjct: 173 KIDKLNEALECYDEALKISRNYMWPWDNKGIILNKLNRINEALECFNQAIQINPN 227
>gi|220925996|ref|YP_002501298.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
gi|219950603|gb|ACL60995.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
Length = 1056
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 70/176 (39%), Gaps = 25/176 (14%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
E E ++ ++++ D + + +N GLI +I+ L +DP + N
Sbjct: 279 EHERAIADYDQALRLDPKYKLAYNNRGLIFQNKSEYDQAIADFDQALRLDPKDAVIYRNR 338
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK--YGSVLAGAGANTGEGAC 264
G A+ G+ +++ + + D + A N K YG LA
Sbjct: 339 GDAFRSKGEYDRAIANYDQALQLDSKYAAVHNNRGLAFYGKGEYGRALAD---------- 388
Query: 265 LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
DQ AL+ DPK A ++ N + + + G+H + ++A +L+P
Sbjct: 389 YDQ-------------ALQLDPKQAIVYTNRGDVFRIKGEHERAIADYDQALRLDP 431
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 74/180 (41%), Gaps = 27/180 (15%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
E E ++ ++++ D + + +N GLI +I+ L +DP + N
Sbjct: 415 EHERAIADYDQALRLDPKYKLAYNNRGLIFQNKSEYDQAIADFDQALRLDPKDAVIYRNR 474
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK---YGSVLAGAGANTGEGA 263
G A+ G+ +++ + + D + AA+ N L + YG LA
Sbjct: 475 GDAFRSKGEYDRAIANYDQALQLDPKY-AAVHNNRGLAFYRKGEYGRALAD--------- 524
Query: 264 CLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
DQ AL+ DPK A ++ N + + + G+H + ++A +L+P +
Sbjct: 525 -YDQ-------------ALQLDPKQAVVYTNRGDVFRIKGEHDRAIADYDQALRLDPKYI 570
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 103/269 (38%), Gaps = 36/269 (13%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
PK+A + G ++ G+ +A+++Y++A ++ + A +H+ + L
Sbjct: 465 PKDAVIYRNRGDAFRSKGEYDRAIANYDQALQLDPKYAA------------VHNNRGLAF 512
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
G E L+ +++Q D +QAVV+ G + G +I+
Sbjct: 513 YRKG-----------EYGRALADYDQALQLDPKQAVVYTNRGDVFRIKGEHDRAIADYDQ 561
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK--YG 249
L +DP N G+ + G+ +++ + + D + A N K Y
Sbjct: 562 ALRLDPKYIFAYNNRGLVFQNKGEYDRAIVDYDQTLRLDPKYAIAYANRGDTFQSKGEYD 621
Query: 250 SVLAGAG-----------ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANA 298
+A A G G + + A AL+ DPK+A + N A
Sbjct: 622 RAIADYDQALQHNPKYVIAYNGRGLAFYRKGEHDRAIADYEEALRLDPKSAAAFNNRGAA 681
Query: 299 YYLTGDHRSSGKCLEKAAKLEPNCMSTRY 327
G++ + L++A +L+P + Y
Sbjct: 682 LNKKGEYDRAITDLDQALRLKPGFANPHY 710
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 114/308 (37%), Gaps = 39/308 (12%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
E ++ ++ ++++ D + AV++ G G +I+ L +DP N
Sbjct: 449 EYDQAIADFDQALRLDPKDAVIYRNRGDAFRSKGEYDRAIANYDQALQLDPKYAAVHNNR 508
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G+A+++ G+ ++ L D + L A++ G V G + A D
Sbjct: 509 GLAFYRKGEYGRA--------LADYDQALQLDPKQAVVYTNRGDVFRIKGEHDRAIADYD 560
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
Q AL+ DPK + N + G++ + ++ +L+P +
Sbjct: 561 Q-------------ALRLDPKYIFAYNNRGLVFQNKGEYDRAIVDYDQTLRLDP-----K 602
Query: 327 YAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWA----GFAAVQKTH 382
YA+A + D +S+ G +I +Q P A G A +K
Sbjct: 603 YAIAYANRGDTFQSK---------GEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRKGE 653
Query: 383 HEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLA 442
H+ A A E L A A L++ + A L AL+ P A+ +
Sbjct: 654 HDRAIADYEEALRLDPKSAAAFNNRGAALNKKGEYDRAITDLDQALRLKPGFANPHYHRG 713
Query: 443 NAYYLTGD 450
A+ GD
Sbjct: 714 TAFRHKGD 721
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 99/265 (37%), Gaps = 42/265 (15%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
PK A H GL + R G+ +A++ Y++A +Q+ Q ++
Sbjct: 499 PKYAAVHNNRGLAFYRKGEYGRALADYDQA-------------------LQLDPKQAVVY 539
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+ GD K E + ++ ++++ D + +N GL+ G +I
Sbjct: 540 TNRGDVFRIKG----EHDRAIADYDQALRLDPKYIFAYNNRGLVFQNKGEYDRAIVDYDQ 595
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY--- 248
L +DP N G + G+ +++ + + Q++P +I Y L Y
Sbjct: 596 TLRLDPKYAIAYANRGDTFQSKGEYDRAIADYDQAL---QHNPKYVIAYNGRGLAFYRKG 652
Query: 249 --GSVLA-----------GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 295
+A A A GA L++ + A L AL+ P A+ +
Sbjct: 653 EHDRAIADYEEALRLDPKSAAAFNNRGAALNKKGEYDRAITDLDQALRLKPGFANPHYHR 712
Query: 296 ANAYYLTGDHRSSGKCLEKAAKLEP 320
A+ GD + L +A +L P
Sbjct: 713 GTAFRHKGDLDRALADLNEAVRLNP 737
>gi|126179259|ref|YP_001047224.1| TPR repeat-containing protein [Methanoculleus marisnigri JR1]
gi|125862053|gb|ABN57242.1| Tetratricopeptide TPR_2 repeat protein [Methanoculleus marisnigri
JR1]
Length = 1069
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 156/451 (34%), Gaps = 99/451 (21%)
Query: 67 VARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHA 126
VA P + + +G++Y LG+ +AV S+++ IL + VQI +A
Sbjct: 278 VALADPDHVPVRYAMGMVYDALGRYERAVKSFDR---ILKHDQGQ---------VQIWYA 325
Query: 127 QCLLPESSGD-----NSLDKELEP------------------EELEEILSKLKESMQSDT 163
+ + G S D+ LE E E + ++ ++ D
Sbjct: 326 RGMALFRFGQYAEAIRSFDRVLESRATTGMKWIGDGTDLALFERDEGGAPRRQKPLKFDA 385
Query: 164 RQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 223
+V N G LL GR + +L DP N + G A G E++A+C
Sbjct: 386 LNELVHNCRGTALLHLGRYAEAQKEFEHVLDADPGNVSVLQRSGTALLHLGRYEEAARCL 445
Query: 224 QDLILKDQNHPAALINYAALLLCKYG----------SVLAGAGANT----GEGACLDQAS 269
D +L+ + H A + A L G SV GA +GA L
Sbjct: 446 -DAVLEKEPHNAVAGSMKADALMNLGRHDDALACLDSVQGAGGAEPHLLYRKGAALLHIG 504
Query: 270 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST--RY 327
A E A L +P A + A G + + C ++A P +
Sbjct: 505 RYTEAVEAFEALLNVNPADAAAENSRGEALVHLGRYEEALACYDRALSAVPADRAALLGR 564
Query: 328 AVAVSRIKDAERSQEPTEQLSWAG-NEMASILREGDPVQIEPPIAW-------------- 372
+ A+ R+ E + E ++L+ AG + ++LR+ AW
Sbjct: 565 STALERLGRYEEALESIDRLTQAGPGDTGTLLRK----------AWILEALGRYDAAVEC 614
Query: 373 --AGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKA 430
A AA KT + V F L + EE AG E A +A
Sbjct: 615 YEALLAADPKTGYPVNLGFVL--AMLGRYEEAAGRFEE------------------ATRA 654
Query: 431 DPKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
DP W N A G + + C KV
Sbjct: 655 DPDNFFAWFNRGRALERMGQYADAAGCYAKV 685
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/171 (19%), Positives = 64/171 (37%), Gaps = 21/171 (12%)
Query: 161 SDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSA 220
D V+ G + + G + + + +L +P + D + +G AY GD ++
Sbjct: 145 GDPENTVLRERCGRMFERIGDFREAAACFEKILRTNPGSTDLLSRIGAAYLNQGDYSKAV 204
Query: 221 KCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLA 280
F ++ + + AL YG A L+ A +C
Sbjct: 205 GLFDRVLDTEPQNIDAL----------YGKARA-----------LEHLGLFQEAADCGAG 243
Query: 281 ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 331
+ +P+ W + + G H + +C EK A +P+ + RYA+ +
Sbjct: 244 IVALEPENIPAWYHRGSMLLRAGKHEDALECFEKVALADPDHVPVRYAMGM 294
>gi|421099375|ref|ZP_15560029.1| tetratricopeptide repeat protein [Leptospira borgpetersenii str.
200901122]
gi|410797577|gb|EKR99682.1| tetratricopeptide repeat protein [Leptospira borgpetersenii str.
200901122]
Length = 1194
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/169 (18%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 53 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 112
R+ ++ +TG + K P + ++H+ +G+++ + + ++ S++++ L D
Sbjct: 685 RKGEIDKAETGFKEILAKKPDSYYSHYQMGIIHLQRKKYEASIDSFDRS----LLLNTDF 740
Query: 113 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 172
+ + ++H SG L KE + + +MQ D+ + +
Sbjct: 741 VAARIGKGISMYH--------SGSKKLAKE-----------EFETAMQQDSANELAPYNI 781
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 221
G+IL +I++ ++ +P D + Y++ GD+EQ+ K
Sbjct: 782 GIILFNDNLYNEAIAIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 830
>gi|158522425|ref|YP_001530295.1| hypothetical protein Dole_2414 [Desulfococcus oleovorans Hxd3]
gi|158511251|gb|ABW68218.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
Length = 589
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E L + ++ QAV L LL+ GR+ +I+ L++DP N NLG A
Sbjct: 412 ETLYRHAAALHPGNIQAV--TNLADTLLEKGRIDEAIAFYRQALSMDPENALVHNNLGAA 469
Query: 210 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL 245
+ ++GD +++A F+ + D HP A N LL+
Sbjct: 470 FLKAGDRQRAAAGFRQALKYDPGHPMAGNNLGNLLV 505
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 125 HAQCLLPES--SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRL 182
HA L P + + N D LE ++E ++ ++++ D A+V N LG LK+G
Sbjct: 417 HAAALHPGNIQAVTNLADTLLEKGRIDEAIAFYRQALSMDPENALVHNNLGAAFLKAGDR 476
Query: 183 QSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
Q + + L DP + NLG + G +++ CF+ + D
Sbjct: 477 QRAAAGFRQALKYDPGHPMAGNNLGNLLVEMGRTDEAIACFEKTLTPDN 525
>gi|428305189|ref|YP_007142014.1| hypothetical protein Cri9333_1614 [Crinalium epipsammum PCC 9333]
gi|428246724|gb|AFZ12504.1| Tetratricopeptide TPR_2 repeat-containing protein [Crinalium
epipsammum PCC 9333]
Length = 423
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 109/280 (38%), Gaps = 36/280 (12%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A AH+LLG +G AV+ Y LV I+ Q LP
Sbjct: 88 PSLAMAHYLLGNSLAEVGDFSGAVNEY---------------------LVTIN-LQPSLP 125
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
E +N++ + L+E +++ + ++ + + LGLIL G+ ++I+
Sbjct: 126 EVYYNNAVALS-KLGRLDEAINQYQYALSFNPSLVDAYYNLGLILEAQGKTDAAIAQYQQ 184
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK---- 247
+ ++PN NLG+ Y + E + FQ + D + A LL +
Sbjct: 185 AIRINPNYAAAQYNLGLLYLKQEQTEPAIAAFQQAVKSDPSFAPAHYQLGLLLALRNDLD 244
Query: 248 ---------YGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANA 298
G A A G G Q A L A+K DPK + + L
Sbjct: 245 AAKTSLNKAVGLNQGLAQAQYGLGVVHAQQGDYKAAIGRLEQAIKQDPKNVNAYQQLGTV 304
Query: 299 YYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAE 338
G+++++ ++A +L + T Y +AV+ +D +
Sbjct: 305 LTQRGNYKAAIATFKQAIRLSSDDALTHYNLAVALHRDKQ 344
>gi|333982592|ref|YP_004511802.1| type 12 methyltransferase [Methylomonas methanica MC09]
gi|333806633|gb|AEF99302.1| Methyltransferase type 12 [Methylomonas methanica MC09]
Length = 449
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 60/149 (40%), Gaps = 21/149 (14%)
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
G++ + G + + + L V PN D +LG Y Q G E + +CF+ I
Sbjct: 60 FGMLRNQLGFAEEGVEYIKKALQVAPNYIDAENSLGNIYLQIGQPELAEQCFRRTI---- 115
Query: 232 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 291
+ A A AN G L + A++ LL A++ +P AH
Sbjct: 116 ---------------ELNPRFASAYANL--GIALKELGRAIEAEDFLLQAIRYEPDVAHH 158
Query: 292 WANLANAYYLTGDHRSSGKCLEKAAKLEP 320
+ NL N Y G + + EKA ++ P
Sbjct: 159 YQNLGNVYRNLGRYDDAVALYEKAIQMHP 187
>gi|294508725|ref|YP_003572784.1| hypothetical protein SRM_02912 [Salinibacter ruber M8]
gi|294345055|emb|CBH25833.1| Conserved hypothetical protein containing TPR domain [Salinibacter
ruber M8]
Length = 554
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 147/388 (37%), Gaps = 50/388 (12%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P + A G++ LG+P +A+ +YE+A D+ + +L+ + +
Sbjct: 153 PYTSDAWMRRGILLNNLGRPEEALEAYEQA--------LDVNPTDTETLINL----GITL 200
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+S G ++E L E++ + LG+ L + +L++++
Sbjct: 201 DSLG-----------RVDEALEAYDEALSINPLHGEALFNLGVTLERDEQLEAAVEAFQR 249
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYG 249
V P + + LG Y + G+ E+S + + + + D A N +L L ++G
Sbjct: 250 CADVYPEHPEVWYELGYCYDRLGEDEKSVEAYDNHLDIDPYSKDAWYNRGIVLNRLGRFG 309
Query: 250 SVLAG-----------AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANA 298
+ A A G + A E L+ + A + NLA A
Sbjct: 310 EAVESYDMALAIHDEFASAYYNRGNAEANQGDLEAAVESYERVLELEGPDAATYYNLALA 369
Query: 299 YYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASIL 358
Y GD R++ EK L+ N Y + D ER +E E +A N A++
Sbjct: 370 YEEQGDLRAARTYYEKTLDLKSNYPEAWYGLGCCFDTD-ERPEEALECFRYAVNLDANV- 427
Query: 359 REGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEEN--ELSKMEECAGAGESAFLDQASA 416
P W A ++ A E+ ++ L + E A G + L +
Sbjct: 428 ----------PKFWTARADCAYKVGKLDEALESYQHAVRLDESNEHAWTGYAETLLEKEQ 477
Query: 417 VNVAKECLLAALKADPKAAHIWANLANA 444
A E AL+ DPK+A+ + A A
Sbjct: 478 PEEALEAYRQALELDPKSANTYFRQAKA 505
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 34/194 (17%), Positives = 71/194 (36%), Gaps = 23/194 (11%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
E E+E L + ++ + W G++L GR + ++ L V+P + +
Sbjct: 133 FEEGEMETALEVIDRLIELHPYTSDAWMRRGILLNNLGRPEEALEAYEQALDVNPTDTET 192
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 262
+ NLGI G ++++ + + + + + H AL N G
Sbjct: 193 LINLGITLDSLGRVDEALEAYDEALSINPLHGEALFNL---------------------G 231
Query: 263 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
L++ + A E P+ +W L Y G+ S + + ++P
Sbjct: 232 VTLERDEQLEAAVEAFQRCADVYPEHPEVWYELGYCYDRLGEDEKSVEAYDNHLDIDPYS 291
Query: 323 MSTRY--AVAVSRI 334
Y + ++R+
Sbjct: 292 KDAWYNRGIVLNRL 305
>gi|255562045|ref|XP_002522031.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
gi|223538835|gb|EEF40435.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
Length = 979
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 105/264 (39%), Gaps = 38/264 (14%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A+ LG +Y+ LG P +A+ Y++A + RP
Sbjct: 256 PTFPDAYLNLGNVYRALGMPQEAIVCYQRAVQ---------TRPNY-------------- 292
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+ N E +L+ + K+++ D R +N LG L GR++ +I +
Sbjct: 293 AVAFGNLASTYYERGQLDLAIHHYKQAIACDGRFLEAYNNLGNALKDVGRVEEAIQCYNQ 352
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALI-----NYA 241
LA+ P++ + NLG Y + +A ++ + L + A+I NYA
Sbjct: 353 CLALQPSHPQALTNLGNIYMEWNMASTAASYYKATLAVTTGLSAPFNNLAVIYKQQGNYA 412
Query: 242 ALLLCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 297
+ C Y VL A G + V+ A + + A+ P A ANLA+
Sbjct: 413 DAISC-YNEVLRIDPLAADGLVNRGNTYKEIGRVSDAIQDYIRAITIRPTMAEAHANLAS 471
Query: 298 AYYLTGDHRSSGKCLEKAAKLEPN 321
AY +G ++ K +A L P+
Sbjct: 472 AYKDSGRVEAAVKSYRQALVLRPD 495
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 21/169 (12%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
+ K +E+++ + R A + + + G + +I + + PN D NL AY
Sbjct: 109 IEKNEEALRLEPRFAECYGNMANAWKEKGDIDLAIRYYLIAIELRPNFADAWSNLASAYM 168
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 271
+ G + ++A+C + AL L +L A +N G + V
Sbjct: 169 RKGRLNEAAQCCRQ----------------ALAL---NPLLVDAHSNLGN--LMKAQGLV 207
Query: 272 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
A C L AL+ P A W+NLA + +GD + + ++A KL+P
Sbjct: 208 QEAYSCYLEALRIQPTFAIAWSNLAGLFLESGDLNRALQYYKEAVKLKP 256
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 62/165 (37%), Gaps = 13/165 (7%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
++E S E+++ A+ W+ L + L+SG L ++ + + P D NLG
Sbjct: 207 VQEAYSCYLEALRIQPTFAIAWSNLAGLFLESGDLNRALQYYKEAVKLKPTFPDAYLNLG 266
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAA---------LLLCKYGSVLAGAG-- 256
Y G +++ C+Q + N+ A N A+ L + Y +A G
Sbjct: 267 NVYRALGMPQEAIVCYQRAVQTRPNYAVAFGNLASTYYERGQLDLAIHHYKQAIACDGRF 326
Query: 257 --ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 299
A G L V A +C L P NL N Y
Sbjct: 327 LEAYNNLGNALKDVGRVEEAIQCYNQCLALQPSHPQALTNLGNIY 371
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 65/175 (37%), Gaps = 28/175 (16%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
W+ L ++ GRL + LA++P D NLG G ++++ C+ + +
Sbjct: 160 WSNLASAYMRKGRLNEAAQCCRQALALNPLLVDAHSNLGNLMKAQGLVQEAYSCYLEALR 219
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
A N A L L ++ +N A + A+K P
Sbjct: 220 IQPTFAIAWSNLAGLFL---------------------ESGDLNRALQYYKEAVKLKPTF 258
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDA--ERSQ 341
+ NL N Y G + + C ++A + PN YAVA + ER Q
Sbjct: 259 PDAYLNLGNVYRALGMPQEAIVCYQRAVQTRPN-----YAVAFGNLASTYYERGQ 308
>gi|218887207|ref|YP_002436528.1| hypothetical protein DvMF_2117 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758161|gb|ACL09060.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 207
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
L+ +L+ L +E+ Q + V W+ +G + L+ G + +I L L DP+
Sbjct: 71 LQRGDLDGCLRYNEEAAQCRAKFPVPWSNIGFVHLQRGEPEEAIKALKKALKWDPDFIQA 130
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYA 241
+ +G AYF GD E S + ++ I ++ A N A
Sbjct: 131 MATMGAAYFMQGDYEASIQISREAIKREPGFGPAYNNLA 169
>gi|444915193|ref|ZP_21235329.1| Tetratricopeptide repeat family [Cystobacter fuscus DSM 2262]
gi|444713775|gb|ELW54667.1| Tetratricopeptide repeat family [Cystobacter fuscus DSM 2262]
Length = 477
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 86/203 (42%), Gaps = 25/203 (12%)
Query: 63 GLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIAR-PELLSLV 121
G V + P++ +A F LG++ +R G+ A ++YEK + D P LL+L
Sbjct: 96 GFQEVLHRAPQSLNAQFNLGVIAERQGRLADAQAAYEKVRFL------DAGHVPTLLNLG 149
Query: 122 QIHHAQCLLPES-----SGDNSLDKELEPEELE------EILSKLKESMQSDTR------ 164
+++ Q E+ +G + ++ EP L + KL ++ + R
Sbjct: 150 RLYRMQGKFAEAISLYEAGLKTPGRDTEPALLNNLSVAYRLAGKLPQAEATSRRVLSRHP 209
Query: 165 -QAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 223
A + L L+ + GR + + +VL + + + NLG+ Y + D ++ F
Sbjct: 210 DDAEAYKNLALVYYEQGRYRLAETVLVNARKLAEKDPGISNNLGMVYLKLEDRPRALAQF 269
Query: 224 QDLILKDQNHPAALINYAALLLC 246
Q + D+ +N AL L
Sbjct: 270 QKAVSLDERFAPGYVNLGALALA 292
>gi|149058911|gb|EDM09918.1| similar to KIAA0372 gene product (predicted), isoform CRA_b [Rattus
norvegicus]
gi|149058912|gb|EDM09919.1| similar to KIAA0372 gene product (predicted), isoform CRA_b [Rattus
norvegicus]
gi|149058915|gb|EDM09922.1| similar to KIAA0372 gene product (predicted), isoform CRA_b [Rattus
norvegicus]
gi|149058916|gb|EDM09923.1| similar to KIAA0372 gene product (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 609
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 134 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL--GLILLKSGRLQSSISVLSS 191
SG ++D +E E+ E L+ L Q + A W L GL LK+G +++ L +
Sbjct: 64 SGAAAVDLSVELEDTETALAILTAVTQKASSGAAKWAWLRRGLYYLKAGHHSQAVADLQA 123
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 223
L DP +C+C +LG AY G + K F
Sbjct: 124 ALRADPKDCNCWESLGEAYLSRGSYTTALKSF 155
Score = 38.5 bits (88), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 278 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
L AAL+ADPK + W +L AY G + ++ K +A++L P+ + + VA
Sbjct: 121 LQAALRADPKDCNCWESLGEAYLSRGSYTTALKSFTRASELSPDSTYSVFKVA 173
>gi|328947737|ref|YP_004365074.1| hypothetical protein Tresu_0849 [Treponema succinifaciens DSM 2489]
gi|328448061|gb|AEB13777.1| Tetratricopeptide TPR_2 repeat-containing protein [Treponema
succinifaciens DSM 2489]
Length = 887
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 138/347 (39%), Gaps = 51/347 (14%)
Query: 159 MQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQ 218
++SD + + ++LG + +KSG + +++ S ++ +D N + + +LG Y + +
Sbjct: 35 LKSDPQNIELLSSLGNLYVKSGDDEKALAYFSEIIRIDSKNVEALNSLGGIYRRLKKYDD 94
Query: 219 SAKCFQDLILKDQNHPAALIN--YAALLLCKYGSVL----AGAGANTGEGACLDQASAV- 271
S + ++ D+++ + N + L+ KY L N + + ++
Sbjct: 95 SISVLEQAVISDESNVQSFYNLGFTFKLMGKYDDALNCFNRVVEENPEDVLAFNHIGSIY 154
Query: 272 ---NVAKECL---LAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS- 324
N K+ + L LK DP + NLA +Y G+ + E A K +P +
Sbjct: 155 ALKNQNKDAVSSYLRGLKIDPNHPILHLNLAKSYDALGEFEKAQAEYEAALKTKPGWLEA 214
Query: 325 -------------TRYAVAVSR------IKDAERSQE----PTEQLSWAGNEMASILREG 361
TR A + R KDA + T+Q + E+ E
Sbjct: 215 IENYADLLLKKNKTRNAGELVRHALNLNPKDAAMHTKLGDVYTKQSDFDNAEVE--YNEA 272
Query: 362 DPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAF------LDQAS 415
++ E P A +G A+ ++ A E + +ME + S L A
Sbjct: 273 LKIRPEFPKALSGLASAYESTGRNEDALEI----MGRMENASPEDSSMLCQYAHILLSAD 328
Query: 416 AVNVAKECLLAALKADPKAAHIWANLANAYYL-TGDHRSSGKCLEKV 461
+ A + + A + +P H+ NL YY+ GD R + C +K+
Sbjct: 329 RIEEAGKKIQCAYEKNPDDLHVL-NLLGQYYICIGDERKASGCFKKI 374
>gi|321462775|gb|EFX73796.1| hypothetical protein DAPPUDRAFT_215448 [Daphnia pulex]
Length = 689
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 16/156 (10%)
Query: 181 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 240
R + + L LL +DP N + NLG+ +GDM + F+ +L N +AL N
Sbjct: 497 RRREATKRLKHLLQLDPINERALFNLGMLAMDNGDMPSAEHYFKGSVLLKPNFRSALFN- 555
Query: 241 AALLLCKYGSVLAGAG---------ANTGEGACLDQASAVNVAKE------CLLAALKAD 285
ALLL G L + +G L +N K+ C + L+ D
Sbjct: 556 LALLLSDTGRPLEAVPFLKQLVHHHQDHIKGLILLGDIYINSMKDLEAAEGCYIRILELD 615
Query: 286 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
P NL Y GD ++ KCL++A +L P+
Sbjct: 616 PMNVQGQHNLCVVYVERGDLSAAEKCLQQAHRLAPH 651
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 108/284 (38%), Gaps = 61/284 (21%)
Query: 77 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGD 136
AH +G Y LG+ +++AEE L+ A+ LLP +
Sbjct: 307 AHINVGRTYNNLGR-------FKEAEEAYLK------------------AKSLLPRAKPG 341
Query: 137 NSLDKELEPEELEEIL----------SKLKE---------SMQSDTRQAVVWNTLGLILL 177
S + P L L ++L E SM++D QA + G IL+
Sbjct: 342 ESYQARIAPNHLNVFLNLANLIARNETRLGEADALYRQAISMRADYTQAYI--NRGDILI 399
Query: 178 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL 237
K R + + V L D NN D NLG+ + G Q+ + + + +H A+L
Sbjct: 400 KMNRTKEAQEVYEKALFYDRNNPDIYYNLGVVLLEQGKPSQALAYLERALELEPDHQASL 459
Query: 238 INYAALLLCKYGSVLAGAGANTGEGACLDQA-SAVNV---------AKECLLAALKADPK 287
+N A +L +A + A D + S VNV A + L L+ DP
Sbjct: 460 LNSAIVL-----QEMAANDKGHQDNAESDSSQSEVNVEVTQWRRREATKRLKHLLQLDPI 514
Query: 288 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 331
NL GD S+ + + L+PN S + +A+
Sbjct: 515 NERALFNLGMLAMDNGDMPSAEHYFKGSVLLKPNFRSALFNLAL 558
>gi|407772275|ref|ZP_11119577.1| hypothetical protein TH2_00210 [Thalassospira profundimaris WP0211]
gi|407284228|gb|EKF09744.1| hypothetical protein TH2_00210 [Thalassospira profundimaris WP0211]
Length = 628
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 78/190 (41%), Gaps = 31/190 (16%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
+E+ LS+ K++M+S N GL +IS+ L +P+ L
Sbjct: 5 VEKALSRAKQAMKS--------NQFGL----------AISICEKHLKTEPDAAVIWVLLA 46
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVLA-----------G 254
A+ D EQ+ CF+ ++ +P + N A + K+ L
Sbjct: 47 NAHSAQKDYEQAYACFKKVVDLAPQNPKSYQNLAVFYQGIGKFNEALQCYQKAASCDANY 106
Query: 255 AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 314
A A G G L ++ A++ AL+ DP+ A + NLA+ ++ TG ++ + K
Sbjct: 107 APAYNGAGIVLMTVGQLDAAQQYFAKALQLDPQFADAYNNLAHVFFTTGRFPAAAQSYAK 166
Query: 315 AAKLEPNCMS 324
A L P S
Sbjct: 167 ATDLNPYLTS 176
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+ E L +++ D A +N G++L+ G+L ++ + L +DP D NL
Sbjct: 88 KFNEALQCYQKAASCDANYAPAYNGAGIVLMTVGQLDAAQQYFAKALQLDPQFADAYNNL 147
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN--YAALLLCKYGSV 251
+F +G +A+ + + +AL N Y+ ++C + +
Sbjct: 148 AHVFFTTGRFPAAAQSYAKATDLNPYLTSALANRFYSLAMMCDWSGI 194
>gi|118381868|ref|XP_001024094.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89305861|gb|EAS03849.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 850
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 38/201 (18%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
PK +A+ +GL Q+LGQ +A+ Y+KA I + L+ ++ + +L
Sbjct: 204 PKFTNAYINVGLTLQQLGQNQEAIQHYDKA--------IQIDKNAFLA----YYNKAILC 251
Query: 132 ESSGDN-----SLDK--ELEPE----------------ELEEILSKLKESMQSDTRQAVV 168
+ G N + +K E+ P + EE + + +Q D V
Sbjct: 252 KQLGKNQEALNNYNKVIEINPNYSNAYLNKGSLFLFSGKYEEAIKNYDKVIQLDPNHKQV 311
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
+ G+ L GR Q SI + + +DPNNC N G+A G + + C+ I
Sbjct: 312 YYNKGISLKALGRYQESIENYNKAIQLDPNNCKIQNNKGLALEALGKSQDALDCYNKAIQ 371
Query: 229 KDQNHPAALINYAALLLCKYG 249
D P ++YA L +
Sbjct: 372 ID---PFFTLSYANRALVNFN 389
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 114/279 (40%), Gaps = 45/279 (16%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P AH GL + L Q +A++++ KA L+C+ + L+ I + L
Sbjct: 102 PNYKQAHLNKGLCFFNLNQFQEALNNFNKA----LQCDPKYS----LACYNIALSYQKLG 153
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+S ++ L+ +++ D + GL+ + G+ Q ++
Sbjct: 154 QS---------------QQALTYYDKAINLDPNYKNAYLNRGLLYMNEGQKQQALQDFRQ 198
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 251
++A+DP + N+G+ Q G +++ + + I D+N A L Y +LCK
Sbjct: 199 IIAIDPKFTNAYINVGLTLQQLGQNQEAIQHYDKAIQIDKN--AFLAYYNKAILCK---- 252
Query: 252 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 311
G N Q + N K ++ +P ++ + N + + +G + + K
Sbjct: 253 --QLGKN--------QEALNNYNK-----VIEINPNYSNAYLNKGSLFLFSGKYEEAIKN 297
Query: 312 LEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWA 350
+K +L+PN Y +S +K R QE E + A
Sbjct: 298 YDKVIQLDPNHKQVYYNKGIS-LKALGRYQESIENYNKA 335
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 69/366 (18%), Positives = 144/366 (39%), Gaps = 46/366 (12%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCL-- 129
PK + A + + L YQ+LGQ +A++ Y+KA + + LL + + Q L
Sbjct: 136 PKYSLACYNIALSYQKLGQSQQALTYYDKAINLDPNYKNAYLNRGLLYMNEGQKQQALQD 195
Query: 130 ------LPESSGDNSLDKELEPEEL---EEILSKLKESMQSDTRQAVVWNTLGLILLKSG 180
+ + ++ L ++L +E + +++Q D + + ++ + G
Sbjct: 196 FRQIIAIDPKFTNAYINVGLTLQQLGQNQEAIQHYDKAIQIDKNAFLAYYNKAILCKQLG 255
Query: 181 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 240
+ Q +++ + ++ ++PN + N G + SG E++ K + +I D NH N
Sbjct: 256 KNQEALNNYNKVIEINPNYSNAYLNKGSLFLFSGKYEEAIKNYDKVIQLDPNHKQVYYNK 315
Query: 241 AALL--LCKYGSVLAGAGA-----------NTGEGACLDQASAVNVAKECLLAALKADPK 287
L L +Y + +G L+ A +C A++ DP
Sbjct: 316 GISLKALGRYQESIENYNKAIQLDPNNCKIQNNKGLALEALGKSQDALDCYNKAIQIDPF 375
Query: 288 AAHIWANLANAYYLTGDHRSSGKCLEKAAK-LEPNCMSTRYAVAVSRIKDA--------- 337
+AN A + G+ + + +++A+K LE + ++ IK+
Sbjct: 376 FTLSYANRALVNFNLGNKDQAVEDMKQASKLLEQGHLKDMSQQNINHIKNTIQKLNEIEQ 435
Query: 338 ------------ERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEV 385
+ +QE E++ N+ S+L+E Q +A A+ +K
Sbjct: 436 QGSEILKKTDQLQGNQEEKEKVQKIANDFVSLLKEKAKKQAIQDVAQITRASEEKNDSNS 495
Query: 386 AAAFET 391
+ F+
Sbjct: 496 STQFDN 501
>gi|333986950|ref|YP_004519557.1| hypothetical protein MSWAN_0723 [Methanobacterium sp. SWAN-1]
gi|333825094|gb|AEG17756.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 401
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 65/336 (19%), Positives = 127/336 (37%), Gaps = 35/336 (10%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E E L ++++ D VW G +K + + ++ L +DPN N
Sbjct: 60 ENYPESLECYDKALELDPNYFNVWYNKGYTFVKLEKYREALECYDKALELDPNYFGVWFN 119
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN--YAALLLCKYGSVLAGAGANTG--- 260
G A + G+ ++ +C+ + + D N+ N YA L +Y + G
Sbjct: 120 KGYALTELGEYLEALECYDEALELDPNYFGVWFNKGYALTELGEYSEAVKSYDTALGIDP 179
Query: 261 --------EGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 312
G L + A E AL+ +PK + W +A H + +
Sbjct: 180 SDATTWYNRGNILTKLKKYVEAIESYDKALEINPKFTYAWTGRGSALTELKKHLEAVESY 239
Query: 313 EKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEP--PI 370
+KA +++P + + S L+ G + ++ ++I+P PI
Sbjct: 240 DKALEIDPKHVLAWFNRGYS--------------LAALGKYLEAVKSYDRALEIDPGDPI 285
Query: 371 AW--AGFAAVQKTHHEVAAAFETEENELS--KMEECAGAGESAFLDQASAVNVAKECLLA 426
W G+A + + + A E+ + L+ ++ A ++ + + A E
Sbjct: 286 TWFSKGYALAELGKY--SDALESYDKALAIDPIDSIALYNKANIMLEIGKYPEALESFDK 343
Query: 427 ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVL 462
AL+ DP + W + + +++ + KC EK L
Sbjct: 344 ALEIDPDYVNAWNDKGETFTKLENYQEALKCYEKAL 379
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 91/252 (36%), Gaps = 48/252 (19%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P +A + G + +L + ++A+ SY+KA EI P+
Sbjct: 179 PSDATTWYNRGNILTKLKKYVEAIESYDKALEI---------NPKF--------TYAWTG 221
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
S L K LE E ++++ D + + W G L G+ ++
Sbjct: 222 RGSALTELKKHLEAVE------SYDKALEIDPKHVLAWFNRGYSLAALGKYLEAVKSYDR 275
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL--CKYG 249
L +DP + + G A + G + + + + D AL N A ++L KY
Sbjct: 276 ALEIDPGDPITWFSKGYALAELGKYSDALESYDKALAIDPIDSIALYNKANIMLEIGKYP 335
Query: 250 SVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 309
L E AL+ DP + W + + +++ +
Sbjct: 336 EAL-----------------------ESFDKALEIDPDYVNAWNDKGETFTKLENYQEAL 372
Query: 310 KCLEKAAKLEPN 321
KC EKA KL+PN
Sbjct: 373 KCYEKALKLDPN 384
>gi|218438243|ref|YP_002376572.1| hypothetical protein PCC7424_1257 [Cyanothece sp. PCC 7424]
gi|218170971|gb|ACK69704.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424]
Length = 237
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 68/153 (44%), Gaps = 23/153 (15%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
PKN A+F G +Y +L KA++ Y+KA E PEL+
Sbjct: 82 PKNVDAYFNRGFVYSQLKDFPKALADYQKALEF---------EPELVE------------ 120
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+ N + LE E+ ++ ++ E+++ + +A N L L G + + L+
Sbjct: 121 --AYINRGNVYLELEDYQKAITDYTEALKFNPDEAFAHNNLALAYFNLGNPERAKLELTK 178
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 224
+ +DP + N G+ +F+ GD +++ FQ
Sbjct: 179 AVELDPAYGEAYFNRGLVFFELGDEQKARADFQ 211
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 63/157 (40%), Gaps = 25/157 (15%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
AV W G+ ++G Q +I + + +DP N D N G Y Q
Sbjct: 51 AVNWVEQGIDKTETGHYQQAIENFNQAIILDPKNVDAYFNRGFVYSQ------------- 97
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGA--CLDQASAVNVAKECLLAALK 283
LKD P AL +Y L ++ L A N G D A+ E ALK
Sbjct: 98 --LKD--FPKALADYQKAL--EFEPELVEAYINRGNVYLELEDYQKAITDYTE----ALK 147
Query: 284 ADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
+P A NLA AY+ G+ + L KA +L+P
Sbjct: 148 FNPDEAFAHNNLALAYFNLGNPERAKLELTKAVELDP 184
>gi|405362768|ref|ZP_11025821.1| hypothetical protein A176_1960 [Chondromyces apiculatus DSM 436]
gi|397090228|gb|EJJ21102.1| hypothetical protein A176_1960 [Myxococcus sp. (contaminant ex DSM
436)]
Length = 624
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 115/267 (43%), Gaps = 38/267 (14%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKA-EEILLRCEADIARPELLSLVQIHHAQ 127
R P + GL+++R+ + A ++E +E + +A + R LSLV H
Sbjct: 320 RGDPGEPRLAYYAGLVHERMRRFSDAAVAFEGVPQESDVFADARVRRARSLSLVGEHSRA 379
Query: 128 CLL--------PE-----SSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGL 174
L PE + +L++ P E +L +E++ + A +++ L
Sbjct: 380 ITLYRAAIQDAPEDVDLRAQFARALERGGTPGRAEALL---REALDAGP-SAALYDALAA 435
Query: 175 ILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP 234
+L + GR ++ +L +A P + D + LG A+ + GD+ + + ++ +H
Sbjct: 436 MLHRQGRGDEALRLLGDAVARFPRDEDLLYVLGAAHERQGDVPGALARMRAVLAVSPDHA 495
Query: 235 AALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWAN 294
AAL N+ G +LA AG N E A+ + AL+ P+ +
Sbjct: 496 AAL-NF-------LGYLLAQAGQNLDE------------AERRVRRALELRPETGAYLDS 535
Query: 295 LANAYYLTGDHRSSGKCLEKAAKLEPN 321
L Y+ GD+ + LE+A+ L P+
Sbjct: 536 LGWVYFRRGDYTRAVDALERASSLSPD 562
>gi|427722289|ref|YP_007069566.1| hypothetical protein Lepto7376_0290 [Leptolyngbya sp. PCC 7376]
gi|427354009|gb|AFY36732.1| Tetratricopeptide TPR_1 repeat-containing protein [Leptolyngbya sp.
PCC 7376]
Length = 305
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 75/180 (41%), Gaps = 40/180 (22%)
Query: 171 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 230
T GL ++ G++ +I + + +A+DP NLG+AY Q+GD++++A F ++
Sbjct: 57 TQGLQRIQQGQVAQAIQLFNEAIALDPELWQAHYNLGLAYRQAGDLQKAADAFYQTVVIQ 116
Query: 231 QNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAH 290
N AL G +L + L+QA AV DP
Sbjct: 117 PNF--------ALGFASIGGILLDVQNWSQAQQYLEQAIAV-------------DP---- 151
Query: 291 IWANLANAYYLTG-DHRSSGKC------LEKAAKLEPNCMSTRYAVAVS-----RIKDAE 338
NLA A+Y G HR G+ E A +L PN +A + RIK AE
Sbjct: 152 ---NLAIAHYNFGLLHRQFGRTAAAIQAWETANQLAPNLTEAAIQLAEAYLDGDRIKQAE 208
>gi|399076961|ref|ZP_10752228.1| hypothetical protein PMI01_03318 [Caulobacter sp. AP07]
gi|398036207|gb|EJL29427.1| hypothetical protein PMI01_03318 [Caulobacter sp. AP07]
Length = 598
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 83/191 (43%), Gaps = 13/191 (6%)
Query: 77 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLR---CEADIAR-------PELLSLVQIHHA 126
A +LG+ ++ G ++ YE A +L R D+ R PE+ + IH+
Sbjct: 94 AWHVLGIAREKTGDFAGSMRCYEAALTLLPRHGAVAGDLGRLAFRMDMPEIAAKFFIHYL 153
Query: 127 QCLLPESSGDNSLDKEL-EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSS 185
+ + G N+L L E +E + L+ ++Q++ Q ++WNTLG ++ G Q+
Sbjct: 154 RERPDDLEGINNLACALRELNRCDEAIDVLRPAIQANPEQPLLWNTLGTVMCSLGDGQTG 213
Query: 186 ISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS-AKCFQDLILKDQNHPAALINYA-AL 243
++ L + P N A GD+E + A C + L + A + + A
Sbjct: 214 VTFFDETLRLAPQFGKAYHNRAYAKIDLGDVEGALADCDSAIALAESAEDLATMQFGRAT 273
Query: 244 LLCKYGSVLAG 254
+L G V G
Sbjct: 274 ILLALGRVEEG 284
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 70/178 (39%), Gaps = 21/178 (11%)
Query: 157 ESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 216
++++ D R V W+ LG+ K+G S+ + L + P + G+LG F+
Sbjct: 83 KALERDDRLGVAWHVLGIAREKTGDFAGSMRCYEAALTLLPRHGAVAGDLGRLAFRMDMP 142
Query: 217 EQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKE 276
E +AK F + + + + N A L + + + A +
Sbjct: 143 EIAAKFFIHYLRERPDDLEGINNLA---------------------CALRELNRCDEAID 181
Query: 277 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRI 334
L A++A+P+ +W L GD ++ ++ +L P + A ++I
Sbjct: 182 VLRPAIQANPEQPLLWNTLGTVMCSLGDGQTGVTFFDETLRLAPQFGKAYHNRAYAKI 239
>gi|198422556|ref|XP_002123270.1| PREDICTED: similar to tetratricopeptide repeat domain 8 isoform 1
[Ciona intestinalis]
Length = 498
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 101/253 (39%), Gaps = 42/253 (16%)
Query: 79 FLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNS 138
LLG +YQR+ QPL+++++Y++ E + D R L+++ ++H
Sbjct: 246 LLLGKVYQRMDQPLQSIATYKQGLE---KFPDD--RSLLVAIARVHD------------- 287
Query: 139 LDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPN 198
E +L++ K+ +++D ++ + + + SI + LL + +
Sbjct: 288 -----EMGQLDDATKWYKDVLETDGVNVEAIASIAANYFYTDQPEISIRLYRRLLQMGIH 342
Query: 199 NCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGAN 258
N + NLG+ + + + + CF + ++ + Y V G G N
Sbjct: 343 NVELFNNLGLCCYFAQQYDMTMNCFDRALSLAEDEQLGDVWY------NISHVALGIGDN 396
Query: 259 TGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 318
N+A +CL A+ AD + NLA GD + L AA+L
Sbjct: 397 -------------NLAYQCLRLAIAADNGHTEAYNNLAVLELRRGDVERAKSLLRSAAEL 443
Query: 319 EPNCMSTRYAVAV 331
P+ Y +A
Sbjct: 444 APHAYEHHYNLAT 456
>gi|118383764|ref|XP_001025036.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89306803|gb|EAS04791.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 670
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 75/187 (40%), Gaps = 15/187 (8%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
++++Q + + N LGL S + + S+ + L + PN+ D + N G +++ G
Sbjct: 392 QKAIQINPNNILALNNLGLAFQHSNQFEFSLQTYQNALKISPNDIDILNNQGTLFYKLGQ 451
Query: 216 MEQSAKCFQDLILKDQNHPAALINYAALLL--------CKYGSVLAGAGANTGE-----G 262
E++ F+ + + H ++ N L L KY L E G
Sbjct: 452 YEKAIASFKKALRINSEHNSSYFNLGMLYLKMQKYNKSIKYFESLVKMTPLDNEALFHLG 511
Query: 263 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
Q + + ALK P+ A N+ Y + S L+++ +L+P
Sbjct: 512 FSYKQVQNHQKSLKYFYQALKIAPQKAKYLFNIGQVYMEKLLKQKSYTYLQRSLQLKP-- 569
Query: 323 MSTRYAV 329
+S +Y +
Sbjct: 570 LSEKYVI 576
>gi|118095504|ref|XP_413706.2| PREDICTED: Bardet-Biedl syndrome 4 protein [Gallus gallus]
Length = 532
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 21/158 (13%)
Query: 163 TRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKC 222
R + + LG I L G + +I V + P N D + LG+ Y Q GD +++ +
Sbjct: 165 NRHDLTYMMLGKIHLLEGETEKAIEVYKKAVEFSPENTDLLTKLGLIYLQLGDYQKAFEH 224
Query: 223 FQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAAL 282
+ DQ NY A L GS++ G +VA A +
Sbjct: 225 LGKALTYDQG------NYKATLAA--GSMMQAHG-------------DYDVALSKYRAVV 263
Query: 283 KADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
+ P++ +W N+ ++ + ++ CL++A L P
Sbjct: 264 SSMPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAP 301
>gi|404253183|ref|ZP_10957151.1| sulfotransferase [Sphingomonas sp. PAMC 26621]
Length = 715
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 25/180 (13%)
Query: 66 HVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLS-LVQIH 124
HV P + A L+GLM G A+ +A C+A LS L ++
Sbjct: 36 HVLALWPGQSDALHLMGLMAHAYGNLDIAIDHLRRA------CQAPRVHATYLSNLAEMC 89
Query: 125 HAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQS 184
+ LLPE+ + + D WN LG+IL +SG+L+
Sbjct: 90 RQKGLLPEAE------------------DAARRGVTMDPAMVAGWNNLGIILQESGKLEE 131
Query: 185 SISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
S+S L +LA+ P+ + NLG + G +EQ+ ++ + + A+ N + LL
Sbjct: 132 SLSCLERVLALQPDYPEAHNNLGNTLKRLGRLEQARGQYEAALRLSPAYAEAMSNLSNLL 191
>gi|428313677|ref|YP_007124654.1| hypothetical protein Mic7113_5616 [Microcoleus sp. PCC 7113]
gi|428255289|gb|AFZ21248.1| hypothetical protein Mic7113_5616 [Microcoleus sp. PCC 7113]
Length = 1041
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 68/184 (36%), Gaps = 24/184 (13%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E +E +S ++ + + VW+ G L K GR + +IS L+++PN + N
Sbjct: 223 ERYKEAISSYDHALLINPNVSEVWSNRGFALWKLGRYEEAISSYDYALSINPNVSEVWSN 282
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
G A ++ G E++ F +L + N N G+ L
Sbjct: 283 RGFALWKLGRYEEAVSSFDHALLINPNDSLVWSN---------------------RGSAL 321
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN---C 322
D + A AL DP+ W NA + + ++A L PN C
Sbjct: 322 DDLNRYEEAISSWDRALSLDPENTSAWYGRGNALEDLEQYEEAIASWDRALTLNPNLPEC 381
Query: 323 MSTR 326
+ R
Sbjct: 382 WTNR 385
>gi|347733085|ref|ZP_08866150.1| tetratricopeptide repeat family protein [Desulfovibrio sp. A2]
gi|347518112|gb|EGY25292.1| tetratricopeptide repeat family protein [Desulfovibrio sp. A2]
Length = 207
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
L+ +LE L +E+ Q + V W+ +G + L+ G + +I L L DP+
Sbjct: 71 LQRGDLEGCLRYNEEAAQCRAKFPVPWSNIGFVHLQRGEPEEAIKALKKALKWDPDFIQA 130
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYA 241
+ +G AY+ GD E S + ++ I ++ A N A
Sbjct: 131 MATMGAAYYMQGDYEASIQISREAIKREPGFGPAYNNLA 169
>gi|317154775|ref|YP_004122823.1| tetratricopeptide domain-containing protein [Desulfovibrio
aespoeensis Aspo-2]
gi|316945026|gb|ADU64077.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
aespoeensis Aspo-2]
Length = 443
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 145 PEELEEILSKLKESM-QSDTRQAV-VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
PE E+ L K+ E+ QS + + ++N LG+ L G+ + +I S LA+ P++
Sbjct: 303 PEMSEKYLLKVIETKGQSLNKDDIALFNKLGIALRGQGKWREAIDNYSRALAISPDDEGL 362
Query: 203 IGNLGIAYFQSGDMEQSAKCF 223
N+G+AYF GD +A+CF
Sbjct: 363 HYNMGMAYFDGGDKRMAARCF 383
>gi|154150715|ref|YP_001404333.1| hypothetical protein Mboo_1172 [Methanoregula boonei 6A8]
gi|153999267|gb|ABS55690.1| TPR repeat-containing protein [Methanoregula boonei 6A8]
Length = 4079
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 117/305 (38%), Gaps = 48/305 (15%)
Query: 71 MPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLL 130
+P +A AH+ GL LG+ KA+ S+ A E D + + L + +A L
Sbjct: 2416 VPGHAQAHYHKGLALFALGKNEKAIRSFTHA------LEHDPSLSDALFHTGLAYA-ALS 2468
Query: 131 PESSGDNSLDKELE--PEELEEILSK----------------LKESMQSDTRQAVVWNTL 172
S ++ DK LE P+ E + K L+ S+ + A VW
Sbjct: 2469 RYSPALSAFDKLLESGPQNAEALFQKGRMLAKLGRPDEALAVLETSLGLENNIADVWLLK 2528
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
G +LL+ RL+ ++ V LA+ P N G A+ ++ +CF ++ D
Sbjct: 2529 GSVLLEQERLEDALEVFDRALALTPENNAAWYRKGKAFSGLHRYPEAIQCFDRVVTSDTG 2588
Query: 233 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 292
C A A +G+ L + A E L AL+ P A+ W
Sbjct: 2589 -------------C--------AQAWFRKGSALLSNGDLRAAIEALTKALELKPDNANGW 2627
Query: 293 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY--AVAVSRIKDAERSQEPTEQLSWA 350
+ A A G + S ++A L P S + A+SR+ ++ E E S
Sbjct: 2628 YDRAVALAGLGRYEESIPSYDRALSLNPKYTSAYFDKGSALSRLGRDRQAIEAFEMASAI 2687
Query: 351 GNEMA 355
E A
Sbjct: 2688 DPEFA 2692
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 79/194 (40%), Gaps = 31/194 (15%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A A + +GL LG+ AV++Y++A +I RP+ V H L
Sbjct: 411 PGCASAAYQIGLASASLGRYSDAVAAYDRALKI---------RPDYPDAV-YHKGFALAK 460
Query: 132 ESSGDNSL---DKELEPE------------------ELEEILSKLKESMQSDTRQAVVWN 170
+ +++L D+ L LEE L L +S+ A V+
Sbjct: 461 LGNSEDALLEFDRALTENPGNAPAYHQKGQLLVRTGRLEEALEALNKSIALKPDNAQVYY 520
Query: 171 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 230
G LLK+ R ++ + + PN + N GIA+ ++G +++ + F I D
Sbjct: 521 DKGSALLKAERFGPALEAFDQAIGIYPNYVNAYYNKGIAFSRTGMRKEALEAFDHAIAID 580
Query: 231 QNHPAALINYAALL 244
H AL + +L
Sbjct: 581 PTHTLALYHRGTML 594
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 32/174 (18%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLS----LVQIHHAQ 127
P N+ AH+ +GL G+P A++++E A +I D P + L+ + Q
Sbjct: 1159 PHNSEAHYHMGLALAGSGRPKDALAAFESALKI-----RDTFAPAWYNKGKMLLDLGKYQ 1213
Query: 128 CLLPESSGDNSLDKELEPEE--------------LEEILSKLKESMQSDTRQAVVWNTLG 173
L ++ D +L++E E E + + +++ DT A + G
Sbjct: 1214 EAL--AAFDQALEREPAYTEVFYSRGVALSKLGRFPEAIEAFERNLEKDTSNAPGYYFKG 1271
Query: 174 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
+ L K GR Q ++ L DP N + YFQ G FQ+ +
Sbjct: 1272 IALSKLGRYQEALDAFDRALVYDPENA-------LVYFQKGRALDGLNRFQEAV 1318
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 75/217 (34%), Gaps = 20/217 (9%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+L + +Q+D W G+ L GR +IS L + P N D +
Sbjct: 3353 KLTNAMEAFDHVIQADPGSVQGWLHRGMALFDLGRFNDAISSYKKALEIGPTNADAWYLV 3412
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLC---KYGSVLAGAG------- 256
G +Y+ +++ F D L Q A Y L KYG ++
Sbjct: 3413 GRSYYALNTYDEAIAAF-DRALDLQGEFAEAWYYKGRTLFAMGKYGEAVSAYDSTLVLRP 3471
Query: 257 ----ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 312
A +G L + A AL+ P ++IW A H+ + C
Sbjct: 3472 KHDEAFYHKGMALLKLQRAGDAVSAFDQALRLRPNFSYIWTGKGMALAALDRHKDAISCY 3531
Query: 313 EKAAKLEPNCMSTRYAVAVS-----RIKDAERSQEPT 344
KA L+ Y +S R +DA R+ E T
Sbjct: 3532 TKAIALDRKDSRAYYQAGLSYLSLGRYQDAIRNFEAT 3568
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 76/189 (40%), Gaps = 27/189 (14%)
Query: 48 TSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLR 107
++ EE +++L L P++ A + G+ L + +AV S+E+ EI R
Sbjct: 697 VTTGKFEEAIAALNRAL----EDAPRDERAWYYKGMSLAALQRFEEAVRSFERVLEINRR 752
Query: 108 CEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAV 167
C + Q +A L ++LE I+S ++++ D V
Sbjct: 753 CSP--------AFFQKGNALAHL--------------GKQLEAIIS-YDQALEIDPDNPV 789
Query: 168 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
G+ L + R +I LL ++P N + LGIAY +++ F+ +
Sbjct: 790 TLYQKGIALAQRERYDDAIKTFERLLTLEPENAQALYYLGIAYAGRQRFDEAIVAFERSL 849
Query: 228 LKDQNHPAA 236
D +P A
Sbjct: 850 EIDPKNPLA 858
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 73/194 (37%), Gaps = 15/194 (7%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
+ +S ++ D A V+ G+ L GR +I+ + + P N+G
Sbjct: 124 FRDAISAYDHALAIDPTYAKVYYNKGIALADLGRHDEAIAAYGKAVGIVPEYAKAYYNMG 183
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK---YGSVLAGAGANTG---- 260
I+ ++ G +++ F+ D + P + Y A +L K Y AG
Sbjct: 184 ISLYEIGRYDEALGAFEKAHDLDPSDPW-VWYYRAFILAKQERYAQAAEAAGVFLSFEPE 242
Query: 261 -------EGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
+G L + ++ A + A++ DP A W + + + + L+
Sbjct: 243 HADIWVIQGISLYRLRRLDEAADAFDRAIEQDPLAPDAWLYKGFSLFDMERYEDATYALD 302
Query: 314 KAAKLEPNCMSTRY 327
KAA+L P Y
Sbjct: 303 KAAELSPQTTKIYY 316
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 82/199 (41%), Gaps = 25/199 (12%)
Query: 11 EGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLKTGLVHVARK 70
+G + LGK I S D ALE D G + + RE ++KT +
Sbjct: 760 KGNALAHLGKQLEAIIS-YDQALEIDPDNPVTLYQKGIALAQRERYDDAIKT-FERLLTL 817
Query: 71 MPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLL 130
P+NA A + LG+ Y + +A+ ++E++ EI D P + + +C
Sbjct: 818 EPENAQALYYLGIAYAGRQRFDEAIVAFERSLEI------DPKNPLAHHYMGVSLVEC-- 869
Query: 131 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
+ ++ L E++ D A + G+ L+S + + +I+ L+
Sbjct: 870 ---------------DRYDDALRSFSEALLLDASNASTYYYQGIAFLQSHQYEEAIAALN 914
Query: 191 SLLAVDPNNCDCIGNLGIA 209
+ + +D + D LGI+
Sbjct: 915 TAIRMDTSLSDAFTYLGIS 933
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 109/312 (34%), Gaps = 67/312 (21%)
Query: 71 MPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLL 130
+PK A AH L G+ G ++ +Y++A L C+
Sbjct: 1464 LPKYAPAHHLKGVSLAAQGLYQDSIYAYDRA----LECDP-------------------- 1499
Query: 131 PESSGDNSLDKELEPEEL---EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSIS 187
SG+++L+K + L E+ L+ ++++ A W GLIL GR Q S+
Sbjct: 1500 --GSGESALNKAMSLHNLGQDEDALAAAVKAIEIQPDFAEAWRYRGLILSNLGRYQESVE 1557
Query: 188 VLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNH--PAALINYAALLL 245
L LA DP N G A+ G E + + D L+ Q PA + ALL
Sbjct: 1558 ALDHALAGDPKNARVNYQKGRAFDGLGQYENAISAY-DAALQAQPDCIPARMHKGEALLF 1616
Query: 246 CKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDH 305
S A + L P A W +A A + GD+
Sbjct: 1617 I----------------------SRFRDATKEFGKILTEHPDNAEAWIKMARARFSLGDY 1654
Query: 306 RSSGKCLEKAAKLEPNCMST------------RYAVAVSRIKDAERSQEPTEQLSW-AGN 352
+ + A + + RY AV + AE+ EQ + G
Sbjct: 1655 TEVIEACDHALRFNADSAEALLYRGLAQYELGRYEEAVESLARAEQIDSHLEQAVYHLGA 1714
Query: 353 EMASILREGDPV 364
+ + R GD +
Sbjct: 1715 ALLKLERYGDAI 1726
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 87/246 (35%), Gaps = 34/246 (13%)
Query: 82 GLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDK 141
GL Y + Q +A+ SY+KA E+ AD + SL ++ + L D
Sbjct: 3855 GLAYAAIDQYREAIKSYDKALELDTHG-ADAFSHKGSSLAELGMYRDALEAFEKAIEKDP 3913
Query: 142 ELEPE------------ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVL 189
EL + E + E ++ D AV W G+ L +++I
Sbjct: 3914 ELATSWFGKGNVLYDLGKFTEACAAYDEGLRRDPENAVGWTRRGMSLAGLNDHKAAIESY 3973
Query: 190 SSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYG 249
LA+DP+ G A+ G E++ F+ +I + A I+
Sbjct: 3974 DRALAIDPSFSIAYFTRGSAFEALGQFEEAEASFRAMISLQPDFVDAWIH---------- 4023
Query: 250 SVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 309
+G L + A AL+ DP IW ++ + G H +
Sbjct: 4024 -----------QGRALQEQEKYQEALTSFKRALEIDPSRKEIWNDVGSTLDKLGKHEEAQ 4072
Query: 310 KCLEKA 315
C EKA
Sbjct: 4073 ICYEKA 4078
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 87/419 (20%), Positives = 156/419 (37%), Gaps = 82/419 (19%)
Query: 75 AHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL-----SLVQIHHAQCL 129
A AH+ G R GQ +AV++++ A LR ++D PE +L + ++
Sbjct: 3712 AEAHYYKGTALARKGQYEEAVAAFDAA----LRIKSDY--PEAFYEKGRALFHLERSKEA 3765
Query: 130 LPESSGDNSLDKELEPEELEEILSKLKE---------SMQSDTR---------QAVVWNT 171
L ++ D +L P E I K + +++S R QA W
Sbjct: 3766 L--AAYDQALSAN--PGYAEAIFQKGRTYITLQNPDGAIRSFDRALEVNPSCFQAHYWKA 3821
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
L G ++I+ +A+ P+ + + G+AY ++ K + D L+
Sbjct: 3822 R--TLYDEGSYDAAITEYDRAIAIKPDRPELYRDRGLAYAAIDQYREAIKSY-DKALELD 3878
Query: 232 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 291
H GA A + +G+ L + A E A++ DP+ A
Sbjct: 3879 TH--------------------GADAFSHKGSSLAELGMYRDALEAFEKAIEKDPELATS 3918
Query: 292 WANLANAYYLTGDHRSSGKCLEKAAKLEP-NCMS-TRYAVAVSRIKDAERSQEPTEQLSW 349
W N Y G + ++ + +P N + TR ++++ + D + + E ++
Sbjct: 3919 WFGKGNVLYDLGKFTEACAAYDEGLRRDPENAVGWTRRGMSLAGLNDHKAAIESYDR--- 3975
Query: 350 AGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESA 409
+ I+P + A F + + E FE E M A
Sbjct: 3976 -------------ALAIDPSFSIAYF--TRGSAFEALGQFEEAEASFRAMISLQPDFVDA 4020
Query: 410 FLDQASAVN---VAKECLLA---ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVL 462
++ Q A+ +E L + AL+ DP IW ++ + G H + C EK L
Sbjct: 4021 WIHQGRALQEQEKYQEALTSFKRALEIDPSRKEIWNDVGSTLDKLGKHEEAQICYEKAL 4079
>gi|110289194|gb|ABG66115.1| tetratricopeptide repeat, putative, expressed [Oryza sativa
Japonica Group]
Length = 271
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%)
Query: 103 EILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSD 162
++L+R E D++ EL V+ A G L ++ P ++ + +++ + +
Sbjct: 114 QVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAAIKYLQQAIQKWDRDE 173
Query: 163 TRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKC 222
A V+N LG+ + +L SI + + P NLG AY Q D++ + K
Sbjct: 174 QDLAQVYNALGVSYKRDNKLDKSIQQFEKAVELQPGYVTAWNNLGDAYEQKKDLKSALKA 233
Query: 223 FQDLILKDQNHPAA 236
F++++L D N+ A
Sbjct: 234 FEEVLLFDPNNTVA 247
>gi|91775613|ref|YP_545369.1| TPR repeat-containing protein [Methylobacillus flagellatus KT]
gi|91709600|gb|ABE49528.1| TPR repeat [Methylobacillus flagellatus KT]
Length = 573
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 12/184 (6%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI-------LLRCEADIARPELLSLVQIH 124
P + HF LG + +LG +A++SY++A +I + + +LL H
Sbjct: 77 PSISEMHFNLGSVLSQLGHEDEAITSYKRAIQISPGLAVAHFNLGTLLQKKQLLEEAIAH 136
Query: 125 HAQCLLPESS---GDNSLDKELEPE-ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSG 180
+ Q ++ E ++ L+ + L++ ++ ++S+ + + A+ L L G
Sbjct: 137 YRQAVVIEPGFFEAYGAMGTALQQQGHLDDAIACYRQSL-AISDHALGHFNLATALRDRG 195
Query: 181 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 240
L+ ++S +A+ PN D NLG + GDME + C+ + H AA N
Sbjct: 196 ALEQAVSHYRQAIALQPNYADAHNNLGEVFRDQGDMENAVACYLQALRMKPGHQAASFNM 255
Query: 241 AALL 244
A L
Sbjct: 256 AQFL 259
>gi|118580891|ref|YP_902141.1| hypothetical protein Ppro_2478 [Pelobacter propionicus DSM 2379]
gi|118503601|gb|ABL00084.1| Tetratricopeptide TPR_2 repeat protein [Pelobacter propionicus DSM
2379]
Length = 884
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 27/191 (14%)
Query: 50 SSSREEKVSSLKTGLVHV---------------ARKMPKNAHAHFLLGL-MYQRLGQPLK 93
S R E +++ K+GL+ + ++ PK A H L GL +YQR Q +
Sbjct: 222 SMDRSETLAAYKSGLIQIEKGDLPKADGIADSMIKEFPKRAEGHRLKGLVLYQR-KQYAE 280
Query: 94 AVSSYEKAEEILLRCEA-------DIARPEL-LSLVQIHHAQCLLPESSGDNSLDKE--L 143
A++S + + +I EA R EL SL Q +P S + L
Sbjct: 281 AMTSLQNSIKIAPTLEAYYFMGLCQYGRGELESSLSQFRQVLDRVPSSRQARLMTATVLL 340
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
+ +++ + ++K+ +Q+D AV N LG + G + L+ ++DP D
Sbjct: 341 AQKRVDDAIGEIKKVLQADDNDAVAHNLLGNAYMAKGMFDEGMRELNRATSIDPRIVDAY 400
Query: 204 GNLGIAYFQSG 214
G YF G
Sbjct: 401 LKKGYFYFSRG 411
>gi|297539636|ref|YP_003675405.1| hypothetical protein M301_2466 [Methylotenera versatilis 301]
gi|297258983|gb|ADI30828.1| TPR repeat-containing protein [Methylotenera versatilis 301]
Length = 510
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 70/175 (40%), Gaps = 28/175 (16%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P HF LG+ L + +A +SY KA I L+ A L +++Q
Sbjct: 78 PNTPDLHFNLGITLTNLNRYEEAEASYRKA--IALQAGFFEAHGNLGTVLQ--------- 126
Query: 132 ESSGDNSLDKELEPEELEEILSKLKE--SMQSDTRQAVVWNTLGLILLKSGRLQSSISVL 189
+ LEE ++ ++ S+ D R LG L G+L +I+
Sbjct: 127 ------------KQGRLEEAVTSYRKALSIHEDPRGHF---NLGTALRDKGKLDEAITHF 171
Query: 190 SSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
+ + PN D LG Y G+ME + KC+ D + +QNH A N L
Sbjct: 172 KQAIKMFPNYADAHNYLGECYRDQGNMEDAIKCYFDTLALNQNHAGANYNMGEFL 226
>gi|256422077|ref|YP_003122730.1| hypothetical protein Cpin_3056 [Chitinophaga pinensis DSM 2588]
gi|256036985|gb|ACU60529.1| TPR repeat-containing protein [Chitinophaga pinensis DSM 2588]
Length = 543
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 82/183 (44%), Gaps = 13/183 (7%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
++ ++ D + ++ G + +++ +L+S+I+ LS+ + +DP+ N G+AY+
Sbjct: 329 IADFTSAITLDPQSSLALGYRGALYIETKQLESAIADLSAAIKIDPDALQHYYNRGLAYY 388
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAA---------LINYAALLLCKYGSVLAGAGANTGEG 262
Q G E + F LI K + A +N AL + + A
Sbjct: 389 QWGAYEPAIADFTTLITKGPPNAVAYRYRGNLYTYVNKPALAIADISKAIDLAPKEAESY 448
Query: 263 ACLDQASAVNV----AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 318
A A A+ A + ++K DP + I+ N A AY +++++ K +A +L
Sbjct: 449 AVRGLAYALQADYKQAVQDFSTSIKLDPGSKTIYVNRALAYKYLNNYKAAIKDYTQAIEL 508
Query: 319 EPN 321
+PN
Sbjct: 509 DPN 511
>gi|289548835|ref|YP_003473823.1| hypothetical protein Thal_1064 [Thermocrinis albus DSM 14484]
gi|289182452|gb|ADC89696.1| Tetratricopeptide TPR_2 repeat protein [Thermocrinis albus DSM
14484]
Length = 538
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 124/312 (39%), Gaps = 58/312 (18%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEK---------------AEEILLRCEADIA 113
++ PK A+ L +Y G+ KA+S+ E+ A+E + R + D A
Sbjct: 72 KQYPKLPEAYLTLHSVYSVRGEQHKAMSALEEGYRVVPDSPQILLLLADEYMRRSQYDKA 131
Query: 114 RPELLSLVQIHHAQCLLPE--------SSGDNSLDKELEPEELEEILSKLKESMQSDTRQ 165
P L L +++ Q LP + GD ++ + L++S++
Sbjct: 132 TPLLQRLSELN-PQNPLPYYLLARLYMAQGDQ-----------KKAIEYLEKSLRVKPTF 179
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
+ TLG + G L + ++ S+L DPNN + L Y SG E++ + ++
Sbjct: 180 EAGFITLGGLYESRGELSKAETLYKSILEKDPNNRVALERLASLYASSGRWEEAKETYRK 239
Query: 226 LILKDQNHPAALINYA-ALLLCK---YGSVLA-----------GAGANTGEGACLDQASA 270
LI +P + Y AL+L K Y L N G L+
Sbjct: 240 LI---DLYPDSGYQYQYALVLIKASQYEEALQVLSELRQKNKDDLQVNFTYGVVLELLKR 296
Query: 271 VNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
AK+ L+ DP I LA Y GD+ + + +K K++P+ + +A
Sbjct: 297 TEEAKKVYEELLQKDPNNVRIMERLAGVYADLGDYTKAEETAQKVLKIDPSNYNMLLLMA 356
Query: 331 -----VSRIKDA 337
+R++DA
Sbjct: 357 HLLSETNRLQDA 368
>gi|381158848|ref|ZP_09868081.1| Flp pilus assembly protein TadD [Thiorhodovibrio sp. 970]
gi|380880206|gb|EIC22297.1| Flp pilus assembly protein TadD [Thiorhodovibrio sp. 970]
Length = 685
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 75/186 (40%), Gaps = 21/186 (11%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
E+ L++++ +A + LGL L GR++ S + +A +P + D NLG
Sbjct: 56 EQAAKYLRQALIEAPERAELHFMLGLALEPIGRIRESAAAFEQTIARNPGHADAWNNLGA 115
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
+ + + EQ+ F + Q P Y+ L G+ L +
Sbjct: 116 MHIRLREYEQATNAF---VRAAQLQPGNSHYYSNL------------------GSALREQ 154
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 328
+ A+ L ++ DP A W NL + + +C ++A +L P+ + Y
Sbjct: 155 GKLEEARPILEKTVELDPNNACAWTNLGDVLSACNQPQEGSRCYQRALELNPDEPAAAYN 214
Query: 329 VAVSRI 334
++ R+
Sbjct: 215 QSIERL 220
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 78/186 (41%), Gaps = 27/186 (14%)
Query: 54 EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIA 113
E+ L+ L+ + P+ A HF+LGL + +G+ ++ +++E+ IA
Sbjct: 56 EQAAKYLRQALI----EAPERAELHFMLGLALEPIGRIRESAAAFEQT----------IA 101
Query: 114 RPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLG 173
R HA +N + E E+ + + Q + ++ LG
Sbjct: 102 R-------NPGHADAW------NNLGAMHIRLREYEQATNAFVRAAQLQPGNSHYYSNLG 148
Query: 174 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNH 233
L + G+L+ + +L + +DPNN NLG ++ ++C+Q + + +
Sbjct: 149 SALREQGKLEEARPILEKTVELDPNNACAWTNLGDVLSACNQPQEGSRCYQRALELNPDE 208
Query: 234 PAALIN 239
PAA N
Sbjct: 209 PAAAYN 214
>gi|149058910|gb|EDM09917.1| similar to KIAA0372 gene product (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149058913|gb|EDM09920.1| similar to KIAA0372 gene product (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149058914|gb|EDM09921.1| similar to KIAA0372 gene product (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 809
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 134 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL--GLILLKSGRLQSSISVLSS 191
SG ++D +E E+ E L+ L Q + A W L GL LK+G +++ L +
Sbjct: 264 SGAAAVDLSVELEDTETALAILTAVTQKASSGAAKWAWLRRGLYYLKAGHHSQAVADLQA 323
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 223
L DP +C+C +LG AY G + K F
Sbjct: 324 ALRADPKDCNCWESLGEAYLSRGSYTTALKSF 355
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 278 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
L AAL+ADPK + W +L AY G + ++ K +A++L P+ + + VA
Sbjct: 321 LQAALRADPKDCNCWESLGEAYLSRGSYTTALKSFTRASELSPDSTYSVFKVA 373
>gi|182677316|ref|YP_001831462.1| hypothetical protein Bind_0319 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633199|gb|ACB93973.1| TPR repeat-containing protein [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 301
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 47/103 (45%)
Query: 145 PEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIG 204
P+E L+ L + + + R + ++T G+ K G+ +IS S + +DPNN
Sbjct: 64 PQEASANLASLSDVVSRNPRSSEAYDTRGVAYAKLGKYSEAISDFSQAIKLDPNNAPAYT 123
Query: 205 NLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK 247
N +AY QS + + F I + H A + A LL +
Sbjct: 124 NRALAYRQSNRNDAALADFNRAIEVNPRHAPAYLGRANLLRVQ 166
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 71/175 (40%), Gaps = 21/175 (12%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P NA A+ L Y++ + A++ + +A E+ R P L + Q L
Sbjct: 116 PNNAPAYTNRALAYRQSNRNDAALADFNRAIEVNPRHA-----PAYLGRANLLRVQGNLD 170
Query: 132 ESSGDNSLDKELEPEELE----------------EILSKLKESMQSDTRQAVVWNTLGLI 175
E+ D +L PE + + ++ ++ D + G
Sbjct: 171 EAKSDLDQAIKLNPENAQAFHARGLIYQREGNQPQAITDFDNAIDRDPFAGAPYLARGQS 230
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 230
L+ +G+ +I ++ L VD N D LG+AY +SG+ ++A+ +Q + D
Sbjct: 231 LIATGKYDKAIEDFNAALHVDNKNPDAWAGLGLAYEKSGNRTKAAESYQRALTFD 285
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 112/277 (40%), Gaps = 44/277 (15%)
Query: 44 SGLGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEE 103
+G+ ++ ++ S+ L V + P+++ A+ G+ Y +LG+ +A+S + +A
Sbjct: 54 TGVAEVANQSPQEASANLASLSDVVSRNPRSSEAYDTRGVAYAKLGKYSEAISDFSQA-- 111
Query: 104 ILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDT 163
++ + + A + + L S N + L+ +++ +
Sbjct: 112 --IKLDPNNA--------PAYTNRALAYRQSNRN-----------DAALADFNRAIEVNP 150
Query: 164 RQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 223
R A + +L G L + S L + ++P N G+ Y + G+ Q+ F
Sbjct: 151 RHAPAYLGRANLLRVQGNLDEAKSDLDQAIKLNPENAQAFHARGLIYQREGNQPQAITDF 210
Query: 224 QDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALK 283
+ I +D P A A L + S++A TG+ + A E AAL
Sbjct: 211 DNAIDRD---PFA----GAPYLARGQSLIA-----TGK---------YDKAIEDFNAALH 249
Query: 284 ADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
D K WA L AY +G+ + + ++A +P
Sbjct: 250 VDNKNPDAWAGLGLAYEKSGNRTKAAESYQRALTFDP 286
>gi|218184685|gb|EEC67112.1| hypothetical protein OsI_33911 [Oryza sativa Indica Group]
Length = 291
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%)
Query: 103 EILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSD 162
++L+R E D++ EL V+ A G L ++ P ++ + +++ + +
Sbjct: 134 QVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAAIKYLQQAIQKWDRDE 193
Query: 163 TRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKC 222
A V+N LG+ + +L SI + + P NLG AY Q D++ + K
Sbjct: 194 QDLAQVYNALGVSYKRDNKLDKSIQQFEKAVELQPGYVTAWNNLGDAYEQKKDLKSALKA 253
Query: 223 FQDLILKDQNHPAA 236
F++++L D N+ A
Sbjct: 254 FEEVLLFDPNNTIA 267
>gi|163851391|ref|YP_001639434.1| hypothetical protein Mext_1964 [Methylobacterium extorquens PA1]
gi|254561150|ref|YP_003068245.1| hypothetical protein METDI2727 [Methylobacterium extorquens DM4]
gi|163662996|gb|ABY30363.1| Tetratricopeptide TPR_2 repeat protein [Methylobacterium extorquens
PA1]
gi|254268428|emb|CAX24385.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens DM4]
Length = 286
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
++ L + + + A +NT G ++G+ +I+ S + +DPN+ N +AY
Sbjct: 54 IASLSDVISRNPSDAGAYNTRGAAYARAGQFGEAITDFSKAIQLDPNSASAYNNRALAYR 113
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAAL 243
Q+G + + + F I D N AA I A L
Sbjct: 114 QTGRADAAMQDFSKAIANDPNFSAAYIGRANL 145
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 23/193 (11%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPN-NCDCIGN 205
+ E ++ +++Q D A +N L ++GR +++ S +A DPN + IG
Sbjct: 83 QFGEAITDFSKAIQLDPNSASAYNNRALAYRQTGRADAAMQDFSKAIANDPNFSAAYIGR 142
Query: 206 LGIAYFQSGDME--------------QSAKCF--QDLILKDQNH-PAALINYAALLLCKY 248
+ Q GD++ +SA+ + + L+ + QNH P A+ ++AA +
Sbjct: 143 ANLERAQ-GDLDGALNDLNVAIRLAPESAEAYHARGLVRQKQNHNPEAIGDFAAAI--DR 199
Query: 249 GSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSS 308
+A A G+ L + A E AAL + K A WA AY T + +
Sbjct: 200 NPFVAAPYAARGQ--SLISLGQYDKAIEDFNAALNVNSKDAGSWAYRGLAYEKTNRRKEA 257
Query: 309 GKCLEKAAKLEPN 321
+ ++AA+L+PN
Sbjct: 258 NESYQQAARLDPN 270
>gi|218530199|ref|YP_002421015.1| hypothetical protein Mchl_2240 [Methylobacterium extorquens CM4]
gi|240138554|ref|YP_002963026.1| hypothetical protein MexAM1_META1p1938 [Methylobacterium extorquens
AM1]
gi|418061679|ref|ZP_12699523.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylobacterium
extorquens DSM 13060]
gi|218522502|gb|ACK83087.1| Tetratricopeptide TPR_2 repeat protein [Methylobacterium extorquens
CM4]
gi|240008523|gb|ACS39749.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens AM1]
gi|373564765|gb|EHP90850.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylobacterium
extorquens DSM 13060]
Length = 286
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
++ L + + + A +NT G ++G+ +I+ S + +DPN+ N +AY
Sbjct: 54 IASLSDVISRNPSDAGAYNTRGAAYARAGQFGEAITDFSKAIQLDPNSASAYNNRALAYR 113
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAAL 243
Q+G + + + F I D N AA I A L
Sbjct: 114 QTGRADAAMQDFSKAIANDPNFSAAYIGRANL 145
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 23/193 (11%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPN-NCDCIGN 205
+ E ++ +++Q D A +N L ++GR +++ S +A DPN + IG
Sbjct: 83 QFGEAITDFSKAIQLDPNSASAYNNRALAYRQTGRADAAMQDFSKAIANDPNFSAAYIGR 142
Query: 206 LGIAYFQSGDME--------------QSAKCF--QDLILKDQNH-PAALINYAALLLCKY 248
+ Q GD++ +SA+ + + L+ + QNH P A+ ++AA +
Sbjct: 143 ANLERAQ-GDLDGALNDLNVAIRLAPESAEAYHARGLVRQKQNHNPEAIGDFAAAI--DR 199
Query: 249 GSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSS 308
+A A G+ L + A E AAL + K A WA AY T + +
Sbjct: 200 NPFVAAPYAARGQ--SLISLGQYDKAIEDFNAALNVNAKDAGSWAYRGLAYEKTNRRKEA 257
Query: 309 GKCLEKAAKLEPN 321
+ ++AA+L+PN
Sbjct: 258 NESYQQAARLDPN 270
>gi|158522428|ref|YP_001530298.1| hypothetical protein Dole_2417 [Desulfococcus oleovorans Hxd3]
gi|158511254|gb|ABW68221.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
Hxd3]
Length = 762
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 69/172 (40%), Gaps = 21/172 (12%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
E L ++++ D N G IL + GR + +I L ++P D NLG+
Sbjct: 444 EAALQAFQKAIALDPNHMEAHNNSGFILRELGRPKEAIKFFRRALEINPAYADAHYNLGL 503
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
A+F DM Q+ F+ + + + A N +L+ EG D
Sbjct: 504 AFFDLKDMAQARTAFEQTLRVNPLYSKAHNNLGVILM--------------QEG---DHE 546
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
+AV + ALK DP+ A + NL Y G+ + +KA +P
Sbjct: 547 AAVAAYQR----ALKTDPRFAQAYNNLGIIAYQQGNPDQAASFFKKALTADP 594
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 74/170 (43%), Gaps = 23/170 (13%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P + AH G + + LG+P +A+ + +A EI P + H+ L
Sbjct: 458 PNHMEAHNNSGFILRELGRPKEAIKFFRRALEI---------NP---AYADAHYNLGL-- 503
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+ +++ + + +++++ + + N LG+IL++ G +++++
Sbjct: 504 ---------AFFDLKDMAQARTAFEQTLRVNPLYSKAHNNLGVILMQEGDHEAAVAAYQR 554
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYA 241
L DP NLGI +Q G+ +Q+A F+ + D + A N A
Sbjct: 555 ALKTDPRFAQAYNNLGIIAYQQGNPDQAASFFKKALTADPAYAGAANNLA 604
>gi|82617844|gb|ABB84838.1| Tetratricopeptide repeat-TPR protein [uncultured delta
proteobacterium DeepAnt-32C6]
Length = 333
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 12/162 (7%)
Query: 74 NAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPES 133
+A H LG RLG+ AV +Y++A LR E +A + + A L E
Sbjct: 167 DAGLHLALGRTLARLGELTSAVDAYKEA----LRLEPGLAS----AWFNLGRAYARLGEL 218
Query: 134 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLL 193
+ + S + L ++ E +++ D A W L + GR+ I L S +
Sbjct: 219 AEEASERRRLTKQQQE----AYTQTVTCDPSFAKAWYNLAITYFTQGRVADEIGALESAV 274
Query: 194 AVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
P+ + NL AY +GD ++ K + I + PA
Sbjct: 275 RARPDYPGALYNLAHAYEGTGDQARALKTWTKYIRVSETDPA 316
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 14/174 (8%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
ELE+ L + + +++ A + LG L + G L S++ L ++P NL
Sbjct: 149 ELEDALEQWERAVEIAAADAGLHLALGRTLARLGELTSAVDAYKEALRLEPGLASAWFNL 208
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G AY + G++ + A + L + Q Y + C A A N +
Sbjct: 209 GRAYARLGELAEEASERRRLTKQQQE------AYTQTVTCD--PSFAKAWYNL----AIT 256
Query: 267 QASAVNVAKE--CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 318
+ VA E L +A++A P NLA+AY TGD + K K ++
Sbjct: 257 YFTQGRVADEIGALESAVRARPDYPGALYNLAHAYEGTGDQARALKTWTKYIRV 310
>gi|242006797|ref|XP_002424231.1| smile protein, putative [Pediculus humanus corporis]
gi|212507600|gb|EEB11493.1| smile protein, putative [Pediculus humanus corporis]
Length = 963
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 80/203 (39%), Gaps = 41/203 (20%)
Query: 126 AQCLLPESSGDNSLDKELEPEELEEIL----------SKLKE---------SMQSDTRQA 166
A+ LLP++ S + P L L ++L+E SM++D QA
Sbjct: 505 AKSLLPKAKPGESYQTRIAPNHLNVFLNLANLIAKNVTRLEEADLLYRQAISMRADYTQA 564
Query: 167 VVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDL 226
+ G ILLK R + + V L D NN D NLG+ + + G Q+
Sbjct: 565 YI--NRGDILLKLNRTKEAQEVYERALFYDNNNPDIYYNLGVVFLEQGKASQALAYLDKA 622
Query: 227 ILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADP 286
+ D +H AL+N +A+LL + G V +A++ LL L D
Sbjct: 623 LEFDPDHEQALLN-SAILLQELGRV-----------------ELRKIARDRLLKLLNKDA 664
Query: 287 KAAHIWANLANAYYLTGDHRSSG 309
++ NL DH SG
Sbjct: 665 TNERVYFNL--GMLAMDDHDVSG 685
>gi|197104847|ref|YP_002130224.1| flagellin modification protein FlmG [Phenylobacterium zucineum
HLK1]
gi|196478267|gb|ACG77795.1| flagellin modification protein FlmG [Phenylobacterium zucineum
HLK1]
Length = 596
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 23/179 (12%)
Query: 157 ESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 216
++++ D R W LG+ ++G SS++ S L + P++ + +LG ++ G
Sbjct: 80 KALERDERSGFGWYLLGIARERAGDFASSVTAYESALKLLPDHAEIANDLGRLAYRMGMR 139
Query: 217 EQSAKCFQDLILK-DQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 275
Q+ K F+ + + +NH GAN A DQ A
Sbjct: 140 TQAEKLFRHFLARHPENH---------------------EGANNLACALRDQ-ERYEEAV 177
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRI 334
E L A+ P+ A +W + GD +S +A +L+ + RY + +R+
Sbjct: 178 EVLKPAIIKSPEVAMLWNTMGTVMAEQGDFPTSEVFFREALRLDGDQARPRYNLGNARL 236
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 15/156 (9%)
Query: 73 KNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ---------- 122
++ +LLG+ +R G +V++YE A + LL A+IA +L L
Sbjct: 87 RSGFGWYLLGIARERAGDFASSVTAYESALK-LLPDHAEIAN-DLGRLAYRMGMRTQAEK 144
Query: 123 -IHHAQCLLPES-SGDNSLDKELEPEE-LEEILSKLKESMQSDTRQAVVWNTLGLILLKS 179
H PE+ G N+L L +E EE + LK ++ A++WNT+G ++ +
Sbjct: 145 LFRHFLARHPENHEGANNLACALRDQERYEEAVEVLKPAIIKSPEVAMLWNTMGTVMAEQ 204
Query: 180 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
G +S L +D + NLG A GD
Sbjct: 205 GDFPTSEVFFREALRLDGDQARPRYNLGNARLMQGD 240
>gi|443317371|ref|ZP_21046784.1| Tfp pilus assembly protein PilF [Leptolyngbya sp. PCC 6406]
gi|442783060|gb|ELR92987.1| Tfp pilus assembly protein PilF [Leptolyngbya sp. PCC 6406]
Length = 304
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
GL L++ G++ S+I+ +DP NLG+ Q+GD++ +A F I D
Sbjct: 52 GLALIQQGQVASAIAAFQEATGLDPALAPAHYNLGLVLRQTGDLQGAASAFWQAIQAD-- 109
Query: 233 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 292
P + Y+ L GA+ EG LDQA + L A++ P +
Sbjct: 110 -PQFAMAYSNL------------GASLWEGGNLDQAV------DYLERAIEIQPDLGNAH 150
Query: 293 ANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
NL + GD S+ L +A +L P+
Sbjct: 151 YNLGLVHMARGDLESARAALHRATELTPSA 180
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 38/197 (19%), Positives = 76/197 (38%), Gaps = 23/197 (11%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+L+ S +++Q+D + A+ ++ LG L + G L ++ L + + P+ + NL
Sbjct: 94 DLQGAASAFWQAIQADPQFAMAYSNLGASLWEGGNLDQAVDYLERAIEIQPDLGNAHYNL 153
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G+ + GD+E + + P + L + +
Sbjct: 154 GLVHMARGDLESARAALHRATELTPSAPEPYFHLGRLYMQQ------------------R 195
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
Q A A E + +A + NL A Y G + + + L PN +
Sbjct: 196 QLPAAIAAFEQAITRFSGYVEAHY---NLGVALYAQGSYPEALESFRTTTDLNPNYANAY 252
Query: 327 YA--VAVSRIKDAERSQ 341
Y+ +A +R+ D E ++
Sbjct: 253 YSAGLAFTRLGDYEEAE 269
>gi|108805943|ref|YP_645880.1| hypothetical protein Rxyl_3161 [Rubrobacter xylanophilus DSM 9941]
gi|108767186|gb|ABG06068.1| Tetratricopeptide TPR_2 [Rubrobacter xylanophilus DSM 9941]
Length = 444
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 21/147 (14%)
Query: 171 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 230
TLG L +G + ++ +L +DP N + LGI + + G+ +++ K F + + D
Sbjct: 284 TLGEARLANGDEEGAMDAYRRVLELDPENPEAHLELGILHDRRGERQRAEKHFLESLKAD 343
Query: 231 QNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAH 290
++P AL +YA + +GE + A+E L AL ADP +
Sbjct: 344 PSNPRALYSYANVYYT------------SGE---------LETAEELLARALAADPGYSP 382
Query: 291 IWANLANAYYLTGDHRSSGKCLEKAAK 317
+ LA+ G++ +S + LEKA +
Sbjct: 383 ALSALASIRARRGEYAASLEYLEKAVE 409
>gi|427722230|ref|YP_007069507.1| hypothetical protein Lepto7376_0229 [Leptolyngbya sp. PCC 7376]
gi|427353950|gb|AFY36673.1| Tetratricopeptide TPR_1 repeat-containing protein [Leptolyngbya sp.
PCC 7376]
Length = 371
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 117/291 (40%), Gaps = 25/291 (8%)
Query: 77 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC-EADIARPELLSLVQIHHAQCL------ 129
A F GL Y G+ ++SY+KA I +A R L + + + +
Sbjct: 73 AWFEQGLEYGAQGRYEDEIASYDKALAINPEFHDAWFYRGLALGFLNRYEDEVISYDRAI 132
Query: 130 -LPESSGDNSLDKELEPEELEEI---LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSS 185
L ++GD ++ + E L +I ++ + + +++ A W G++L GR +
Sbjct: 133 TLQPNNGDTWFNRAVALENLGQIDAAITSYEAAGEANPEDAEAWYNRGILLGGLGRFEEE 192
Query: 186 ISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL- 244
I+ L++DP + D N G++ G +E+ + + + +D + A N
Sbjct: 193 IASYDKSLSIDPTSTDTWYNRGVSLGDLGRLEEEIESYDKALEQDPENQDAWYNRGVAFG 252
Query: 245 --------LCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 292
+ Y +LA A G L + A A++ DP+ ++
Sbjct: 253 LLGEFEKEIESYDILLALNPEDADTWYNRGISLSDLGQESEAIVSYREAIRLDPQRDIVF 312
Query: 293 ANLANAYYLTGDHRSSGKCLEKAAKLEP-NCMSTRYAVAVSRIKDAERSQE 342
N+A + G+ ++ LEKA +L P N V + + D R QE
Sbjct: 313 YNIAVSQVRLGEIDAALDSLEKAIELNPANRSFAETDVEFTELFDHPRFQE 363
>gi|56751783|ref|YP_172484.1| hypothetical protein syc1774_c [Synechococcus elongatus PCC 6301]
gi|81301137|ref|YP_401345.1| TPR repeat-containing protein [Synechococcus elongatus PCC 7942]
gi|56686742|dbj|BAD79964.1| hypothetical protein [Synechococcus elongatus PCC 6301]
gi|81170018|gb|ABB58358.1| TPR repeat [Synechococcus elongatus PCC 7942]
Length = 363
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 68/168 (40%), Gaps = 21/168 (12%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
L E + ++++ D +Q VWN G++L K GRL+ +I+ +A+ + N G
Sbjct: 80 LPEAVESYEQALAIDRQQPEVWNNRGIVLRKLGRLEDAIASYQQAIALAAHYAQAWANCG 139
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 267
A +Q G ++ + ++ + D + +A + G + CLDQ
Sbjct: 140 FALWQQGRYREAVRHYEQSVAIDPDQSSA--------WRQLGQIYLSVDQPDQALRCLDQ 191
Query: 268 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 315
A A+ P+ A W +A Y G + ++ E A
Sbjct: 192 AIALQ-------------PQQATAWTWRGHALYNLGQYAAALTSYENA 226
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 86/221 (38%), Gaps = 31/221 (14%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
+ LE +L+ ++ + R +WN G++L + R +++ + L + P + + N
Sbjct: 10 QSLEALLAAYDFRLRHEPRNCTLWNNRGILLERLNRWTEALASYNCALEITPQRQEALNN 69
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV-------------- 251
I G + ++ + ++ + D+ P + N ++L K G +
Sbjct: 70 RAIVLEHLGRLPEAVESYEQALAIDRQQPE-VWNNRGIVLRKLGRLEDAIASYQQAIALA 128
Query: 252 --LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 309
A A AN G L Q A ++ DP + W L Y +
Sbjct: 129 AHYAQAWANCG--FALWQQGRYREAVRHYEQSVAIDPDQSSAWRQLGQIYLSVDQPDQAL 186
Query: 310 KCLEKAAKLEPNCMST------------RYAVAVSRIKDAE 338
+CL++A L+P + +YA A++ ++AE
Sbjct: 187 RCLDQAIALQPQQATAWTWRGHALYNLGQYAAALTSYENAE 227
>gi|411119538|ref|ZP_11391918.1| TPR repeat-containing protein [Oscillatoriales cyanobacterium
JSC-12]
gi|410711401|gb|EKQ68908.1| TPR repeat-containing protein [Oscillatoriales cyanobacterium
JSC-12]
Length = 2384
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 64/165 (38%), Gaps = 13/165 (7%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
+N LGL L G+L+ +I+ LA+ PN NLG + ++++ +Q I
Sbjct: 244 FNNLGLALQHQGKLEEAIATFQQALALQPNFPGVCNNLGNLLLEVNRVDEAIASYQQAIA 303
Query: 229 KDQNHPAALINYAALL---------LCKYGSVLA----GAGANTGEGACLDQASAVNVAK 275
+ N+P AL N L + Y L A + GA L + A
Sbjct: 304 QHPNYPEALNNLGNALQRQGKLDEAITHYQKALELRPNFVEALSNLGAVLKDQHKLEAAV 363
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
L A+ P A I NL NAY + C A L+P
Sbjct: 364 SYLEQAVSLGPSYAEIHNNLGNAYQEQKRVDEAIACYRTAVALKP 408
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 21/175 (12%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
++EE + + +Q A W+ LGLI +L +I+ + L + N+ D NL
Sbjct: 889 QVEEARRRCEAFLQKCPDSADGWHLLGLIAHHDRKLDEAIAYYQNTLKANDNHLDTYNNL 948
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
+A + G ++++ +Q + ++P A NYA LL E + LD
Sbjct: 949 AVALHEQGKLDEAMPYYQKALALKPDNPDAHNNYANLL---------------RERSRLD 993
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
+A A+ A P + NL AYY G+ S+ + +A + +P+
Sbjct: 994 EAIY------HYQQAIAARPDYPDAYNNLGLAYYAKGNFASAAEAYRQAIERKPH 1042
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 67/163 (41%), Gaps = 21/163 (12%)
Query: 170 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 229
N +L + RL +I +A P+ D NLG+AY+ G+ +A+ ++ I +
Sbjct: 980 NNYANLLRERSRLDEAIYHYQQAIAARPDYPDAYNNLGLAYYAKGNFASAAEAYRQAIER 1039
Query: 230 DQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAA 289
+ P A L G+ L G N E A Q A+ P A
Sbjct: 1040 KPHFPQA--------LNHLGNALKELG-NFAEAARYYQ------------QAIALKPDYA 1078
Query: 290 HIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 332
+ N N + GD +++ + ++A +++PN + A++
Sbjct: 1079 KAYNNWGNIFRDEGDLQTAVQYYDQATEIDPNFAEAHWNKALT 1121
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 76/190 (40%), Gaps = 13/190 (6%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+L+E L+ +E+++ A + +G++L + +L +I +A+ P+ D +L
Sbjct: 154 KLDEALACYREAIRLKPNYAEAHHNMGIVLRQQNKLDDAIHYFRQAIALKPHYIDAYTSL 213
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL---------LCKYGSVLA---- 253
G Q G+ E++ C+Q ++ N+ N L + + LA
Sbjct: 214 GSTLQQQGNGEEAIACYQQVVTLKPNYAEGFNNLGLALQHQGKLEEAIATFQQALALQPN 273
Query: 254 GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
G G L + + V+ A A+ P NL NA G + +
Sbjct: 274 FPGVCNNLGNLLLEVNRVDEAIASYQQAIAQHPNYPEALNNLGNALQRQGKLDEAITHYQ 333
Query: 314 KAAKLEPNCM 323
KA +L PN +
Sbjct: 334 KALELRPNFV 343
>gi|384208242|ref|YP_005593962.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
gi|343385892|gb|AEM21382.1| putative TPR domain-containing protein [Brachyspira intermedia
PWS/A]
Length = 817
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 91/210 (43%), Gaps = 27/210 (12%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
LS L + ++ D V++N + LI ++ ++S L+ L +D NN + ++G+ Y+
Sbjct: 367 LSCLNKILEIDNTDVVIYNEIALIKVELELYDEALSYLNKALDIDTNNAEIYNSIGLVYY 426
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGA--CLDQAS 269
D E++ K F I + + +A A N G D +
Sbjct: 427 YKKDYEEAIKNFNKAI-------------------ELNTSMASAYYNIGLAYYEMHDYEN 467
Query: 270 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAV 329
++ + AL+ +P+ A + NL + G+++ + +KA ++ P+ Y +
Sbjct: 468 SIQYYNK----ALEINPQYASAYINLGLIKHNLGNYKEAIDYYKKALEINPDYSLAYYNI 523
Query: 330 AVSR--IKDAERSQEPTEQLSWAGNEMASI 357
A++ ++D + S E + G + A I
Sbjct: 524 ALAEMSLEDYKNSLEDFNKALELGYDEAEI 553
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 50/97 (51%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
+E E +E LS L +++ DT A ++N++GL+ + +I + + ++ +
Sbjct: 392 VELELYDEALSYLNKALDIDTNNAEIYNSIGLVYYYKKDYEEAIKNFNKAIELNTSMASA 451
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 239
N+G+AY++ D E S + + + + + +A IN
Sbjct: 452 YYNIGLAYYEMHDYENSIQYYNKALEINPQYASAYIN 488
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 125/306 (40%), Gaps = 53/306 (17%)
Query: 171 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 230
+GL L + +I++ ++A P+N + N G+ F E++ F +I D
Sbjct: 112 NVGLCYLYMKNYKEAINIYDEVIADFPDNINSYNNRGLCKFYLSQFEEAINDFNKVIELD 171
Query: 231 QNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAH 290
+N A++ Y + LCKY LD+ + ALK KA
Sbjct: 172 KNSTASMA-YNYIGLCKYH---------------LDEIT----------EALKYYEKAIE 205
Query: 291 IWANLANAYYLTGDHRSSGKC-------LEKAAKLEPNCMSTRYAVAVSRIK-DAERSQE 342
I NL NAY+ + SG+ L KA +++P + T + + IK D E E
Sbjct: 206 INPNLINAYHNIALIKHSGEFDDEALSYLNKALEIDPGNLETY--LKIYSIKLDLELYDE 263
Query: 343 PTEQLS----WAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSK 398
E L+ +++ R G+ ++I+ AG+ ++++ + A E N +
Sbjct: 264 ANEYLNKILEMYPDDLYVYDRIGN-IKID-----AGY--MEESLEYLKKALEINPNFIDA 315
Query: 399 MEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 458
+ A A L + N A E L AL+ P +A + + D+ + CL
Sbjct: 316 YYDIAFA-----LHKLDLNNEALEYLEKALQIYPNSADTYFKMFLVKRALRDYEGALSCL 370
Query: 459 EKVLMV 464
K+L +
Sbjct: 371 NKILEI 376
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 117/308 (37%), Gaps = 62/308 (20%)
Query: 77 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESS-- 134
A+ +GL L + +A+ YEKA EI P +L+ +H L+ S
Sbjct: 179 AYNYIGLCKYHLDEITEALKYYEKAIEI---------NP---NLINAYHNIALIKHSGEF 226
Query: 135 GDNSLDK-----ELEPEELE-------------------EILSKLKESMQSDTRQAVVWN 170
D +L E++P LE E L+K+ E D V++
Sbjct: 227 DDEALSYLNKALEIDPGNLETYLKIYSIKLDLELYDEANEYLNKILEMYPDDL---YVYD 283
Query: 171 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 230
+G I + +G ++ S+ L L ++PN D ++ A D+ A + + L
Sbjct: 284 RIGNIKIDAGYMEESLEYLKKALEINPNFIDAYYDIAFA-LHKLDLNNEALEYLEKAL-- 340
Query: 231 QNHPAALINYAALLLCK-----YGSVLAGAGA----NTGEGACLDQASAVNVAKEC---- 277
Q +P + Y + L K Y L+ + + ++ + + V E
Sbjct: 341 QIYPNSADTYFKMFLVKRALRDYEGALSCLNKILEIDNTDVVIYNEIALIKVELELYDEA 400
Query: 278 ---LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAV--AVS 332
L AL D A I+ ++ YY D+ + K KA +L + S Y + A
Sbjct: 401 LSYLNKALDIDTNNAEIYNSIGLVYYYKKDYEEAIKNFNKAIELNTSMASAYYNIGLAYY 460
Query: 333 RIKDAERS 340
+ D E S
Sbjct: 461 EMHDYENS 468
>gi|118385554|ref|XP_001025906.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89307673|gb|EAS05661.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1032
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 101/259 (38%), Gaps = 44/259 (16%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
PK+ + LG Y+ G +A+ SY+K EI + DI L
Sbjct: 505 PKDDDYYNGLGSAYKEKGLVDEAIKSYQKCLEI--NPKDDIYNYNL-------------- 548
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
G+ DK L L+E + ++S++ + + + LG+ G L +I
Sbjct: 549 ---GNAYDDKGL----LDEAIKSYQKSIEINPKNDSCYYNLGIAYKLKGLLDEAIKSYQK 601
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 251
L ++P N C NLGIAY + G ++++ K +Q I + N
Sbjct: 602 CLEINPKNDSCYYNLGIAYKEKGLLDEAIKSYQKSIEINPND---------------DDY 646
Query: 252 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 311
G G LDQ A+ ++C L+ +P + NL N Y G + K
Sbjct: 647 YKGLGNAYKAKGLLDQ--AIKSYQKC----LEINPNNDICYYNLGNTYKEIGLLDETIKS 700
Query: 312 LEKAAKLEPNCMSTRYAVA 330
+K+ ++ P Y++
Sbjct: 701 YQKSIEINPKDDDYYYSLG 719
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 65/333 (19%), Positives = 136/333 (40%), Gaps = 45/333 (13%)
Query: 32 ALEFGVDADGDQSGLGTSSSSR---EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRL 88
++E + D GLG + ++ ++ + S + L P N ++ LG Y+ +
Sbjct: 636 SIEINPNDDDYYKGLGNAYKAKGLLDQAIKSYQKCL----EINPNNDICYYNLGNTYKEI 691
Query: 89 GQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEE- 147
G + + SY+K+ EI + + SL + + LL E+ E+ P++
Sbjct: 692 GLLDETIKSYQKSIEINPKDD-----DYYYSLGSAYDDKGLLDEAIKSYQKCLEINPKDD 746
Query: 148 ---------------LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSL 192
L+E ++ ++S++ + + +N+LG G L +I +
Sbjct: 747 ICYYNLGKAYKSKGLLDEAITSYQKSIEINPKDDDCYNSLGSAYDDKGLLDEAIQSYQNC 806
Query: 193 LAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVL 252
L ++P + C NLG Y + G ++++ + +Q+ I + + + N + CK +L
Sbjct: 807 LEINPMDDSCYYNLGNTYKEKGLLDEAIRSYQESIEINPENDSCYYNLG--IACKSKGLL 864
Query: 253 AGAGANTGE---------------GACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 297
A + + G V+ A + ++++ +PK + +L N
Sbjct: 865 DKAIQSYQKCLEIHPKNDSCYYNLGKAYKSKGLVDEAIKSYQSSIEINPKVDAYYNSLGN 924
Query: 298 AYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
AY + G + K + K+ PN S Y +
Sbjct: 925 AYKVKGLLDEAIKSYQNCLKINPNYNSCYYKLG 957
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 119/309 (38%), Gaps = 49/309 (15%)
Query: 32 ALEFGVDADGDQSGLGTSSSSR---EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRL 88
++E D +GLG++ ++ +E + S + L PKN + LG Y
Sbjct: 398 SIEINPKDDDYYNGLGSAYRAKSLLDEAIKSYQKCL----EINPKNDSCFYNLGNAYDDK 453
Query: 89 GQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEE- 147
G +A+ SY+K EI + DI +L + LL E+ E+ P++
Sbjct: 454 GLLDEAIKSYQKCLEI--NPKDDIC---YYNLGNTQKEKGLLDEAIKSYQKSIEINPKDD 508
Query: 148 ---------------LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSL 192
++E + ++ ++ + + + LG G L +I
Sbjct: 509 DYYNGLGSAYKEKGLVDEAIKSYQKCLEINPKDDIYNYNLGNAYDDKGLLDEAIKSYQKS 568
Query: 193 LAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVL 252
+ ++P N C NLGIAY G ++++ K +Q + + +P K S
Sbjct: 569 IEINPKNDSCYYNLGIAYKLKGLLDEAIKSYQKCL---EINP------------KNDSCY 613
Query: 253 AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 312
G E LD+A + +++ +P + L NAY G + K
Sbjct: 614 YNLGIAYKEKGLLDEAI------KSYQKSIEINPNDDDYYKGLGNAYKAKGLLDQAIKSY 667
Query: 313 EKAAKLEPN 321
+K ++ PN
Sbjct: 668 QKCLEINPN 676
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 109/272 (40%), Gaps = 32/272 (11%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLR---CEADIARPE----LLSLVQIH 124
PK+ ++ LG Y+ G +A++SY+K+ EI + C + LL
Sbjct: 743 PKDDICYYNLGKAYKSKGLLDEAITSYQKSIEINPKDDDCYNSLGSAYDDKGLLDEAIQS 802
Query: 125 HAQCL----LPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSG 180
+ CL + +S N + E L+E + +ES++ + + LG+ G
Sbjct: 803 YQNCLEINPMDDSCYYNLGNTYKEKGLLDEAIRSYQESIEINPENDSCYYNLGIACKSKG 862
Query: 181 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 240
L +I L + P N C NLG AY G ++++ K +Q I + +P Y
Sbjct: 863 LLDKAIQSYQKCLEIHPKNDSCYYNLGKAYKSKGLVDEAIKSYQSSI---EINPKVDAYY 919
Query: 241 AALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 300
+L G+ G LD+ A+ + C LK +P + L AY
Sbjct: 920 NSL-----GNAYKVKGL-------LDE--AIKSYQNC----LKINPNYNSCYYKLGQAYK 961
Query: 301 LTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 332
G + K +K ++ P S Y + ++
Sbjct: 962 SKGLLDEAIKSYQKYLEINPKNDSCYYNLGLA 993
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 107/282 (37%), Gaps = 54/282 (19%)
Query: 73 KNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPE 132
KN F LG +L +A+ SY+K EI + DI L
Sbjct: 336 KNETYWFYLGYTQHQLNFLSEAIKSYQKCLEI--NPKDDICYYNL--------------- 378
Query: 133 SSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSL 192
G +K+L L+E + ++S++ + + +N LG L +I
Sbjct: 379 --GKAYKEKDL----LDEAIKSYQKSIEINPKDDDYYNGLGSAYRAKSLLDEAIKSYQKC 432
Query: 193 LAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL--------- 243
L ++P N C NLG AY G ++++ K +Q + + +P I Y L
Sbjct: 433 LEINPKNDSCFYNLGNAYDDKGLLDEAIKSYQKCL---EINPKDDICYYNLGNTQKEKGL 489
Query: 244 -------------LLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAH 290
+ K G G+ E +D+ A+ ++C L+ +PK
Sbjct: 490 LDEAIKSYQKSIEINPKDDDYYNGLGSAYKEKGLVDE--AIKSYQKC----LEINPKDDI 543
Query: 291 IWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 332
NL NAY G + K +K+ ++ P S Y + ++
Sbjct: 544 YNYNLGNAYDDKGLLDEAIKSYQKSIEINPKNDSCYYNLGIA 585
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 62/153 (40%), Gaps = 23/153 (15%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
PKN ++ LG Y+ G +A+ SY+ + EI + +A SL + + LL
Sbjct: 879 PKNDSCYYNLGKAYKSKGLVDEAIKSYQSSIEINPKVDAYYN-----SLGNAYKVKGLLD 933
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
E+ + + ++ + + LG G L +I
Sbjct: 934 EA------------------IKSYQNCLKINPNYNSCYYKLGQAYKSKGLLDEAIKSYQK 975
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 224
L ++P N C NLG+AY G ++++ K +Q
Sbjct: 976 YLEINPKNDSCYYNLGLAYKSKGLLDEAIKSYQ 1008
>gi|312110112|ref|YP_003988428.1| hypothetical protein GY4MC1_1005 [Geobacillus sp. Y4.1MC1]
gi|336234537|ref|YP_004587153.1| hypothetical protein Geoth_1075 [Geobacillus thermoglucosidasius
C56-YS93]
gi|423719149|ref|ZP_17693331.1| tetratricopeptide repeat family protein [Geobacillus
thermoglucosidans TNO-09.020]
gi|311215213|gb|ADP73817.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacillus sp.
Y4.1MC1]
gi|335361392|gb|AEH47072.1| Tetratricopeptide TPR_2 repeat-containing protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|383368052|gb|EID45327.1| tetratricopeptide repeat family protein [Geobacillus
thermoglucosidans TNO-09.020]
Length = 220
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 21/109 (19%)
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
GIAY Q G+ E++ KCF D I ++ N P IN +G+VLA AG +
Sbjct: 8 GIAYMQKGNYEEAIKCFHDAIEENPNDPVGYIN--------FGTVLAAAG---------E 50
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 315
+ A+N K+ A++ D AA + + + +Y + E+A
Sbjct: 51 EEKALNFFKK----AIELDSNAAAAYYGMGSVFYKRQQFAQAKDMFEQA 95
>gi|253698929|ref|YP_003020118.1| hypothetical protein GM21_0276 [Geobacter sp. M21]
gi|251773779|gb|ACT16360.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21]
Length = 624
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 83/197 (42%), Gaps = 17/197 (8%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E ++ +E+++ + V LG + + G L ++ S + +DP D L
Sbjct: 323 EAIAAYEEALRRKEGSSAVLYNLGTLYERKGDLDQAMRRFSEAIRLDPEYGDARRRLAEI 382
Query: 210 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 269
+ GD+ + +++L+ + ++P L Y L + G A A A + LDQ S
Sbjct: 383 HSVRGDLNAAIAQYRELVSRHGDNP--LSYYKLARLYEQGRQYADAIAAYSKAIELDQDS 440
Query: 270 AV---------------NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 314
V A++ LL L+ DPK A L + Y + + K L+
Sbjct: 441 EVAHQGIARLYLKRKQAEEAEKHLLEVLRLDPKHAEARELLISLYVKARRYDDTEKLLKA 500
Query: 315 AAKLEPNCMSTRYAVAV 331
+A+L P+ + +Y + V
Sbjct: 501 SAELNPDSANDQYRLGV 517
>gi|384538401|ref|YP_005722485.1| hypothetical protein SM11_pD0151 [Sinorhizobium meliloti SM11]
gi|336037054|gb|AEH82984.1| hypothetical exported protein, TonB-dependent receptor protein
[Sinorhizobium meliloti SM11]
Length = 1190
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 21/175 (12%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+LE L+ L+ ++++ + +WN+LGL+ G +++ + +A+DP + NL
Sbjct: 423 DLEGALADLERALKTAPGSSSIWNSLGLVQGARGDNRAAEAAFKQAIALDPLDPVSHANL 482
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
I Y M ++ + + D + AL+ G
Sbjct: 483 AIQYMDEMRMAEAKREIDAALSVDPSFDVALV---------------------ARGRYHM 521
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
Q + A E LLA A+P ++ LA A+Y GD + + L+ A +L+PN
Sbjct: 522 QNGEADKAVEDLLAGSTANPAYSNAQLLLAAAHYEKGDRIPAAQALDNADRLDPN 576
>gi|375131877|ref|YP_004993977.1| TPR repeat protein [Vibrio furnissii NCTC 11218]
gi|315181051|gb|ADT87965.1| TPR repeat protein [Vibrio furnissii NCTC 11218]
Length = 352
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 171 TLGLILLKSGRLQSSISVLSSLLAVD--PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
T+G I G L+ +S + LLA+D PNN + LG Y + GD+EQ F I
Sbjct: 90 TIGRIHQSRGNLE--LSEKAYLLALDANPNNIKVLQQLGSNYTKQGDVEQGESYFIRAIN 147
Query: 229 KDQNHPAAL----INYAALLLCKYGSV--LAGAGANTGEGACLDQASAVNVAKECLLAAL 282
DQ A+ +N ++ + S + A A G G D + +VAK AL
Sbjct: 148 ADQLRLASREKLALNSVSITAIEQLSSDNQSPALAYMGLGILYDVKAKHHVAKAFYQHAL 207
Query: 283 KADPKAAHIWANLANAYYLTGDHRSSGK 310
K +PK++ N+ +YY++G++ ++ +
Sbjct: 208 KIEPKSSKALMNMGYSYYMSGEYDNAKR 235
>gi|402076639|gb|EJT72062.1| RCM-1 [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 895
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 92/252 (36%), Gaps = 44/252 (17%)
Query: 114 RPELLSLVQIHHAQ-CLLPESSGDNSLDKELEPEE---------------LEEILSKLKE 157
RP VQ+HH +P S N + P L E+L L+E
Sbjct: 5 RPSPPMSVQMHHGPGAPIPPGSVPNGGPSFISPSRRMAEATEGVWMQIGSLSELLGNLEE 64
Query: 158 SMQSDTRQAVV-------WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAY 210
+M + R + N + LIL Q + L+++L +DP N + G+LG Y
Sbjct: 65 AMNAYERALTINPQSIPAMNAMSLILRTKEEFQKACEFLNAILKLDPQNGEAWGSLGHCY 124
Query: 211 FQSGDMEQSAKCFQDLILKDQNHPAALINYA-ALLLCKYGSVLAGAGANTGE-------- 261
D++Q+ +Q+ ++ + Y +L +YGS+ A +
Sbjct: 125 LMIDDLQQAYSAYQNALMNLPKPRDPKLWYGIGILYDRYGSLDHAEEAFSSVMQMQPDFE 184
Query: 262 ---------GACLDQASAVNVAKECLLAALKADP---KAAHIWANLANAYYLTGDHRSSG 309
G Q S N + EC + + P IW + + + D+ ++
Sbjct: 185 KANEIYFRLGIIYKQQSKFNQSLECFKYIVHSPPLPLTEEDIWFQIGHVHEQQKDYDNAK 244
Query: 310 KCLEKAAKLEPN 321
+ + EPN
Sbjct: 245 AAYLRVLEREPN 256
>gi|225871875|ref|YP_002753329.1| non-specific serine/threonine protein kinase [Acidobacterium
capsulatum ATCC 51196]
gi|225792350|gb|ACO32440.1| non-specific serine/threonine protein kinase [Acidobacterium
capsulatum ATCC 51196]
Length = 877
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 21/155 (13%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
L + + +MQ D R A + L + +GR Q + + + P++ D LG+ Y
Sbjct: 594 LEQFQRAMQLDPRNADALDGLARVHENAGRFQDAKAEFVRAANLQPDSWDGYNALGMFYD 653
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 271
+ G Q+ +Q ++ L+N LAGA + G+ A L +A +
Sbjct: 654 RQGKYPQAIAAYQSARAITPDNATVLLN------------LAGAYEDQGDPASLHKAEGL 701
Query: 272 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHR 306
L +L P A WANL N YYL +HR
Sbjct: 702 ------LRRSLALHPTYAG-WANLGNLYYL--EHR 727
>gi|357610970|gb|EHJ67246.1| hypothetical protein KGM_00811 [Danaus plexippus]
Length = 667
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 105/255 (41%), Gaps = 30/255 (11%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARP--ELLSLVQIHHAQCL 129
P + AH +G + LG+ +A ++Y KA+ +L + A+P + + +H
Sbjct: 286 PDDVGAHINVGRTFNHLGKYQEAEAAYVKAKSLLPK-----AKPGESYQARIAPNHLNVF 340
Query: 130 LPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVL 189
L + N + K E ++L + SM++D QA + G IL+K R + + V
Sbjct: 341 L---NLANLISKNATRLEEADMLYRQAISMRADYTQAYI--NRGDILIKLNRTKEAQEVY 395
Query: 190 SSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYG 249
L D N D NLG+ + G Q+ + + H AL+N +A+LL + G
Sbjct: 396 ERALLYDSGNPDIYYNLGVVLLEQGKASQALAYLDKALELEPEHEQALLN-SAILLQELG 454
Query: 250 SVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 309
+ A ++A++ LL L D + NL GD +
Sbjct: 455 A-----------------ADLRHLARQRLLKLLDKDATNERVHFNLGMVCMDEGDAECAE 497
Query: 310 KCLEKAAKLEPNCMS 324
+ A L+P+ S
Sbjct: 498 RWFRAAVHLKPDFRS 512
>gi|343502640|ref|ZP_08740486.1| TPR repeat-containing protein [Vibrio tubiashii ATCC 19109]
gi|418481255|ref|ZP_13050303.1| hypothetical protein VT1337_22459 [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
gi|342813759|gb|EGU48718.1| TPR repeat-containing protein [Vibrio tubiashii ATCC 19109]
gi|384571207|gb|EIF01745.1| hypothetical protein VT1337_22459 [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
Length = 335
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 176 LLKSGRLQSSISVLS-----SLLAV--DPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
L GR+ S + L+ L+A+ +PNN + LGI Y ++GD+EQ F +
Sbjct: 87 LFNIGRIHQSRNNLALAEKAYLIAIEENPNNIKVLEQLGILYSRNGDIEQGRSYFLRAVN 146
Query: 229 KDQ--NHPAALINYAALLLCKYGSVL-----AGAGANTGEGACLDQASAVNVAKECLLAA 281
DQ + A + L+ K + L + A G G D +A+ A
Sbjct: 147 ADQLRFNNAETLESEDLVTVKSVTNLKVDQHSPEYAFMGLGVAADLDKQHELAQAFYKQA 206
Query: 282 LKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
L +P++ N+ ++Y++GD+R + + + +A ++P+
Sbjct: 207 LSIEPESVKTLTNVGYSFYMSGDYRKAQRFVLQALDIDPD 246
>gi|433284508|emb|CCO06710.1| Magnetosome protein MamA [Candidatus Desulfamplus magnetomortis
BW-1]
Length = 234
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
Query: 178 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL 237
+ G + + L +++ +D + D I LG+AY ++G + + K ++ +I ++ A
Sbjct: 77 QKGDTKKCVEFLENVVRIDNRDADIIYRLGVAYEKNGQPDSAIKAYKKVISLAPDNAKAH 136
Query: 238 INYAALLLCK--YGSVLA-----------GAGANTGEGACLDQASAVNVAKECLLAALKA 284
A LL+ K Y + L A N G D+ + A E A++
Sbjct: 137 YRKAVLLIKKQDYENALTDLEEAIQEKPDSAELNFRLGQVNDRLKNYDKAIEYFTRAVEL 196
Query: 285 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLE 319
+P+ + N+A Y DH S KCL++A ++E
Sbjct: 197 NPQFLAAFKNMALTYDSLNDHEGSLKCLKRALEIE 231
>gi|428220576|ref|YP_007104746.1| hypothetical protein Syn7502_00451 [Synechococcus sp. PCC 7502]
gi|427993916|gb|AFY72611.1| tetratricopeptide repeat protein [Synechococcus sp. PCC 7502]
Length = 271
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 110/279 (39%), Gaps = 62/279 (22%)
Query: 66 HVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKA---EEILLRCEADIAR----PELL 118
HV R M K A A Y L +PLKA++ YE+ E +++AR L
Sbjct: 5 HVGR-MQKQAEA-------YLSLDKPLKAIAIYEQIISQEPNFAPAHSELARVLESQGWL 56
Query: 119 SLVQIHHAQCLL--PESSGDNSLDKELEPEEL-------EEILSKLKESMQSDTRQAVVW 169
L H+AQ L P S SLD L +L + +S + ++ + + +
Sbjct: 57 ELAIPHYAQALTLAPNSY---SLDSHLNFGKLLHSRGNIDGAISSYQRAININPQYIRAY 113
Query: 170 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIG-----NLGIAYFQSGDMEQSAKCFQ 224
T L++S RL +++ + D D IG +LGIAY G + ++ CFQ
Sbjct: 114 QTWAETLIQSQRLDEVLTLYAQAELYD---LDLIGAKDYSDLGIAYINQGKVIEAITCFQ 170
Query: 225 DLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLA---A 281
I ++ A A N G A L Q N KE L++ A
Sbjct: 171 KSISIQPSY-------------------ASAHCNLG-NALLQQ----NNYKEALISFYEA 206
Query: 282 LKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
L DP+ A ++ NL H + C E A L P
Sbjct: 207 LSIDPEFAEVYFNLGITLTKINRHDEAIACFEAALSLNP 245
>gi|340623460|ref|YP_004741913.1| hypothetical protein GYY_01415 [Methanococcus maripaludis X1]
gi|339903728|gb|AEK19170.1| hypothetical protein GYY_01415 [Methanococcus maripaludis X1]
Length = 344
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 75/216 (34%), Gaps = 47/216 (21%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
L +S+ ++ + W G+ L +I ++++ N D N G A F
Sbjct: 113 LEMYDKSLNINSENSEAWKNKGITLTNMQSYSEAIECFDKSISINAKNSDVWYNKGEAQF 172
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALI----------NYAALLLC--------------- 246
+ G E+S + +L D+ AL+ NY + + C
Sbjct: 173 KLGQYEKSIDSYNKALLIDEKMETALLGKGNSYLKLQNYESAIECFNTAETINPKSEYPP 232
Query: 247 ------------------KYGSVL----AGAGANTGEGACLDQASAVNVAKECLLAALKA 284
Y L + A +G C D+ + A A++
Sbjct: 233 YYKADAYRDTENFEDALKYYDEALEINPSNADVLINKGICFDKMKNYSAAISNFDLAIQI 292
Query: 285 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
DPK IW N+Y D+ SS C +KA ++EP
Sbjct: 293 DPKNVQIWILKGNSYVGLKDYESSISCYKKALEIEP 328
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 110/309 (35%), Gaps = 23/309 (7%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
+N GL L G SIS + L +P + + N G + + G +S +CF +L
Sbjct: 28 YNDKGLELYNQGNYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGESRECFNKALL 87
Query: 229 KDQNHPAALINYAALL---------LCKYGSVLAGAGANT----GEGACLDQASAVNVAK 275
D + A +L L Y L N+ +G L + + A
Sbjct: 88 IDSENSEAFNGLGTVLSKTGNYQKALEMYDKSLNINSENSEAWKNKGITLTNMQSYSEAI 147
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 335
EC ++ + K + +W N A + G + S KA ++ + S +K
Sbjct: 148 ECFDKSISINAKNSDVWYNKGEAQFKLGQYEKSIDSYNKALLIDEKMETALLGKGNSYLK 207
Query: 336 DAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENE 395
+ + E + A +P PP A A + E A + E E
Sbjct: 208 -LQNYESAIECFNTA--------ETINPKSEYPPYYKAD-AYRDTENFEDALKYYDEALE 257
Query: 396 LSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 455
++ + D+ + A A++ DPK IW N+Y D+ SS
Sbjct: 258 INPSNADVLINKGICFDKMKNYSAAISNFDLAIQIDPKNVQIWILKGNSYVGLKDYESSI 317
Query: 456 KCLEKVLMV 464
C +K L +
Sbjct: 318 SCYKKALEI 326
>gi|217978433|ref|YP_002362580.1| hypothetical protein Msil_2286 [Methylocella silvestris BL2]
gi|217503809|gb|ACK51218.1| TPR repeat-containing protein [Methylocella silvestris BL2]
Length = 291
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 145 PEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIG 204
P+E + ++ L + +Q + A +NT G+ KSGR +I+ S + + P +
Sbjct: 55 PQEAQANIASLTDVVQRNPNSADAYNTRGVAYAKSGRYNEAIADFSQAIKIAP-TAASLT 113
Query: 205 NLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL 243
N +AY Q G + + F I D NH A + A L
Sbjct: 114 NRALAYRQIGRNDAALTDFNSAIAADANHAPAYLGRANL 152
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 108/281 (38%), Gaps = 49/281 (17%)
Query: 43 QSGLGTS---SSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYE 99
+SG G + S S +E +++ + L V ++ P +A A+ G+ Y + G+ +A++ +
Sbjct: 42 KSGAGVAEVASQSPQEAQANIAS-LTDVVQRNPNSADAYNTRGVAYAKSGRYNEAIADFS 100
Query: 100 KAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESM 159
+A +I P SL + L G N + L+ ++
Sbjct: 101 QAIKIA---------PTAASLTN----RALAYRQIGRN-----------DAALTDFNSAI 136
Query: 160 QSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 219
+D A + + SG L ++ + L S + ++P N G+ Y + G+ Q+
Sbjct: 137 AADANHAPAYLGRANLERASGDLPAAHADLDSAIKLNPENAQAFHARGLIYQREGNHPQA 196
Query: 220 AKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLL 279
F + I +D P A Y A G L + A E
Sbjct: 197 ITDFDNAIDRD---PFAGAPYLA------------------RGQSLIAIGKYDKAIEDFN 235
Query: 280 AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
AAL D K WA L AY +G+ + + +A +P
Sbjct: 236 AALNVDNKNPDAWAGLGLAYEKSGNRAKASESYSRAIVFDP 276
>gi|386812211|ref|ZP_10099436.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386404481|dbj|GAB62317.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 418
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 103/266 (38%), Gaps = 29/266 (10%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P++A H+ LGL Y V EK E I A + P + H CL
Sbjct: 149 PQDAVTHYHLGLAY---------VGENEKEEAICAFMAAIVINP---NYTDAHF--CL-- 192
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
G LD +L L+E LS+ K+ + A LGL G +++
Sbjct: 193 ---GQVYLDMKL----LDEALSEFKKVTDINPHHAPAHYHLGLTYYAKGDTDNAMDAYKK 245
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN----YA--ALLL 245
+ +DP N NLGI Y + + + F ++ D + A YA +L
Sbjct: 246 SIEIDPKNPKVHYNLGIVYADERLFDNAIEEFSTVVKLDSDDAEAHYRLGKAYADKRVLA 305
Query: 246 CKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDH 305
SV A A+ A++ A L +++ +P ++ +L +AY +
Sbjct: 306 KAIASVQKAAAAHYNIQNPYSDKRALDEAIISLQKSIEVNPYDPSVYFDLGSAYSQSKVL 365
Query: 306 RSSGKCLEKAAKLEPNCMSTRYAVAV 331
+ K LE+ +++PN Y + +
Sbjct: 366 DDAAKALEETIRIDPNFAKAHYGLGM 391
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 88/202 (43%), Gaps = 27/202 (13%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E +++LK++++ D + LGL+ + G + +++ L S++ +DPN+ +A
Sbjct: 68 EAIAELKKTVEIDPTCKDAFFQLGLLYMNKGLWEEAVAALQSVVQLDPNH-------ELA 120
Query: 210 YFQSGDMEQSAKCFQDLI-----LKDQNHPAALINYAALL-----------LCKYGSVLA 253
Y + GD+ +S K F++ + + D N A+ +Y L +C + + +
Sbjct: 121 YSKLGDIYRSKKMFREAVQEYKKVLDINPQDAVTHYHLGLAYVGENEKEEAICAFMAAIV 180
Query: 254 GAGANTGEGACLDQASA-VNVAKECLLAALKA---DPKAAHIWANLANAYYLTGDHRSSG 309
T CL Q + + E L K +P A +L YY GD ++
Sbjct: 181 INPNYTDAHFCLGQVYLDMKLLDEALSEFKKVTDINPHHAPAHYHLGLTYYAKGDTDNAM 240
Query: 310 KCLEKAAKLEPNCMSTRYAVAV 331
+K+ +++P Y + +
Sbjct: 241 DAYKKSIEIDPKNPKVHYNLGI 262
>gi|15606922|ref|NP_214303.1| hypothetical protein aq_1896 [Aquifex aeolicus VF5]
gi|2984175|gb|AAC07708.1| hypothetical protein aq_1896 [Aquifex aeolicus VF5]
Length = 342
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 42/76 (55%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E ++ ++++++ + +WN LGL +++ + + L+++PN + NLGI
Sbjct: 43 EAIANFHKALRANPDEPRIWNALGLAYMEAKEYKKAEESFKKALSINPNYSEARKNLGIL 102
Query: 210 YFQSGDMEQSAKCFQD 225
Y++ G E++ K Q+
Sbjct: 103 YYKLGRYEEALKYLQE 118
>gi|371777955|ref|ZP_09484277.1| hypothetical protein AnHS1_11097 [Anaerophaga sp. HS1]
Length = 707
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 88/214 (41%), Gaps = 22/214 (10%)
Query: 122 QIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGR 181
QI A+ L E +L K E+ L+ E+++ + +N G++ K +
Sbjct: 50 QIIKAKPFLAEPYFYRALGKYY-LEDFNGALNDCNEALKRNPYLVDAYNLRGILYQKLNK 108
Query: 182 LQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYA 241
++S++ L VDP N + + NLGIAY Q+ +++ + + D++ N A +N
Sbjct: 109 PEASVTDFKQGLKVDPLNVNLLINLGIAYIQTEQYDKAIETYSDVLKLSPNLIRAYLNRG 168
Query: 242 ALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYL 301
LA A GA D + A++V +P + N + Y
Sbjct: 169 ----------LAKFSAQDTSGALEDFSKAIDV-----------NPYIPDGYVNRSMIQYY 207
Query: 302 TGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 335
D + + +A KL P+ S A+ R +
Sbjct: 208 KSDFEGALSDINEAIKLRPDESSFYMNRAIIRYQ 241
>gi|340359105|ref|ZP_08681600.1| tetratricopeptide (TPR) domain protein [Actinomyces sp. oral taxon
448 str. F0400]
gi|339885115|gb|EGQ74853.1| tetratricopeptide (TPR) domain protein [Actinomyces sp. oral taxon
448 str. F0400]
Length = 260
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 142 ELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCD 201
E EP + EE ++LK ++D+ LG + LK+ Q +++ L +L VDP+N D
Sbjct: 181 EAEPVDTEE-ETRLKTEAEADSANVSARQQLGEMYLKAALYQDAVTYLQQILDVDPDNLD 239
Query: 202 CIGNLGIAYFQSGDME 217
+ +G+A +QS E
Sbjct: 240 ALLTIGVAEYQSNQYE 255
>gi|296127341|ref|YP_003634593.1| hypothetical protein [Brachyspira murdochii DSM 12563]
gi|296019157|gb|ADG72394.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
Length = 750
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 23/168 (13%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P NA +F + L+ + LG A+S EK EI + D+A ++L++I
Sbjct: 277 PNNADTYFKIFLIKRALGDYDGALSCLEKILEI---DDTDVAIYNEIALIKI-------- 325
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
E E EE L L +++ D A ++NT+GL+ + +I +
Sbjct: 326 ------------ELELYEEALYYLNKALCIDNNNAEIYNTIGLVYHYKRNYEEAIKNFNK 373
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 239
L ++ + N+G++Y++ D E++ + + + + + AA IN
Sbjct: 374 ALELNTSMDMAYYNIGLSYYEMHDYEKAIEYYNKALEINTQYSAAYIN 421
>gi|196004358|ref|XP_002112046.1| hypothetical protein TRIADDRAFT_55686 [Trichoplax adhaerens]
gi|190585945|gb|EDV26013.1| hypothetical protein TRIADDRAFT_55686 [Trichoplax adhaerens]
Length = 445
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 14/107 (13%)
Query: 193 LAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVL 252
+ +DP + D NLG Y++ +ME + CF D I + +N + L +Y VL
Sbjct: 103 VKLDPTSIDAWNNLGECYWKKKNMEAAKNCFNDAITRSRNKDS---------LRRYSMVL 153
Query: 253 AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 299
G++T E + +V++AKE A+ D + W L NAY
Sbjct: 154 RQLGSDTSE-KFKNICESVDIAKE----AVSLDVSDGNSWLVLGNAY 195
>gi|118379597|ref|XP_001022964.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89304731|gb|EAS02719.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 2086
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 103/463 (22%), Positives = 177/463 (38%), Gaps = 98/463 (21%)
Query: 73 KNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPE 132
KN + LG M +L +K + EK ++I + DI + + A L P
Sbjct: 1556 KNYLPYLKLGWMQVKLS-NIKHQEALEKNKQIDSATKTDIQNTLKQGIDNLQKAHSLEPN 1614
Query: 133 SS------GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSI 186
+ G+ L E + E +E +S L ++ D + LG + G LQ +I
Sbjct: 1615 NVEINIKLGEAYLMNEEDNEGADEAISYLTNALNLDDKNYDCLIGLGKAYERKGDLQKAI 1674
Query: 187 SVLSSLLAVD---PN-NCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAA 242
S LA+D PN N + I LG+ Y Q+ +++ + K F+ ++ K+ H ALI YA
Sbjct: 1675 QF--SQLAIDLPNPNPNLNSIFFLGMLYLQNKEIKNAEKQFKSVLSKNSEHVGALIEYAT 1732
Query: 243 LLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA-NAYYL 301
L + + + AK+ ALK D ++ ANL Y
Sbjct: 1733 TLSLQ---------------------NKYDKAKKYFRHALKLD--KNNVIANLRLGKIYQ 1769
Query: 302 T--GDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRI--KDAERSQEP-------TEQLSWA 350
T D + C +K +++P Y + ++ + KD + + E E+ + A
Sbjct: 1770 TKLNDIDGAISCYKKIIEVQPKFAKAHYQLGLALLEKKDYKGATEEFKETIRINERFTGA 1829
Query: 351 GNEMASILREG----------------DPVQIEPPIAWA-------GFAAVQKTHHEVAA 387
+ I E DP +E + A F A + + E++
Sbjct: 1830 YKAIGLIYYENNNPSNACKYYLRALECDPFDMESKLGLANCYYLMENFDAAIQNYEEISG 1889
Query: 388 AFETEENELSKMEEC---AGAGESAFLDQASAVNVAK---ECLL---------------- 425
+ +E E + + C G A +A+N+ + +CL
Sbjct: 1890 IDQNDEIEYN-LANCYYMKGEINEAINHYKNALNLKQDKPDCLYNLGNAYCIQENFKEAL 1948
Query: 426 ----AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
A++ DP+ + NLAN YY+ DH + EK + +
Sbjct: 1949 ICFEKAIQYDPQNSAAMYNLANTYYVLEDHEKASDYFEKAIQL 1991
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 277 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
C A++ DP+ + NLAN YY+ DH + EKA +LEPN +
Sbjct: 1950 CFEKAIQYDPQNSAAMYNLANTYYVLEDHEKASDYFEKAIQLEPNNI 1996
>gi|392338478|ref|XP_001059136.2| PREDICTED: tetratricopeptide repeat protein 37 [Rattus norvegicus]
gi|392345221|ref|XP_226606.5| PREDICTED: tetratricopeptide repeat protein 37 [Rattus norvegicus]
Length = 1563
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 134 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL--GLILLKSGRLQSSISVLSS 191
SG ++D +E E+ E L+ L Q + A W L GL LK+G +++ L +
Sbjct: 530 SGAAAVDLSVELEDTETALAILTAVTQKASSGAAKWAWLRRGLYYLKAGHHSQAVADLQA 589
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 223
L DP +C+C +LG AY G + K F
Sbjct: 590 ALRADPKDCNCWESLGEAYLSRGSYTTALKSF 621
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 278 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
L AAL+ADPK + W +L AY G + ++ K +A++L P+ + + VA
Sbjct: 587 LQAALRADPKDCNCWESLGEAYLSRGSYTTALKSFTRASELSPDSTYSVFKVA 639
>gi|94969466|ref|YP_591514.1| hypothetical protein Acid345_2439 [Candidatus Koribacter versatilis
Ellin345]
gi|94551516|gb|ABF41440.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
Ellin345]
Length = 448
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 69/184 (37%), Gaps = 23/184 (12%)
Query: 119 SLVQIHHAQCLLPESS-GDNSLDKELEPE-ELEEILSKLKESMQSDTRQAVVWNTLGLIL 176
S + A L PE + NSL + L E + E+ +++++ A +N LG L
Sbjct: 88 SETDLQKAIRLAPEDAVAHNSLGRTLFHEGKYEDSAGSYRKAIEIHDDYAEAYNGLGAAL 147
Query: 177 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 236
LK G+ +I S + DP N D + N G A + + + + + P
Sbjct: 148 LKLGKTDEAIGAFQSAASKDPKNVDALSNAGAALLHAQKAQDALPYLEKAKALKPDAPDV 207
Query: 237 LINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 296
L NYA L Q N A ALK DPK+A WA L
Sbjct: 208 LENYA---------------------NALQQLGRTNEAITEYEKALKGDPKSAVAWAQLG 246
Query: 297 NAYY 300
Y
Sbjct: 247 QTQY 250
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 77/187 (41%), Gaps = 27/187 (14%)
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
+S+ D Q V LG + G+ + ++ LA+ P+N D + NLG AY
Sbjct: 262 FNKSLHLDAHQPEVLFLLGAAYTEQGKSKEAMHSYEKGLALKPDNPDGLYNLGHAY---- 317
Query: 215 DMEQSAKCFQDLILKDQNHPAALINYAALLLCK--YGSVLAGAGANTGEGACLDQASAVN 272
+ +P A+ +Y L + + LAG GA LD A
Sbjct: 318 -------------ETQKEYPRAIDSYQKALAARPEFTHALAGLGACQLASNKLDDA---- 360
Query: 273 VAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 332
+A L +++D I N A A + G+ + + + +A KL+P+ Y + +S
Sbjct: 361 IATYRKLVPMQSDDPG--IRFNFATALFNKGNFKEAAENYREAVKLKPDFAHAHYNLGMS 418
Query: 333 --RIKDA 337
R+ DA
Sbjct: 419 LLRLNDA 425
>gi|148705169|gb|EDL37116.1| mCG116369 [Mus musculus]
Length = 1595
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 134 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL--GLILLKSGRLQSSISVLSS 191
SG ++D LE E+ E L+ L Q + A W L GL LK+G+ +++ L +
Sbjct: 562 SGAAAVDLSLELEDTETALAILTAVTQKASAGAAKWAWLRRGLYHLKAGQHSQAVADLQA 621
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 223
L DP +C+C +LG AY G + K F
Sbjct: 622 ALRADPKDCNCWESLGEAYLSRGGYTTALKSF 653
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 278 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
L AAL+ADPK + W +L AY G + ++ K KA++L P+ + + VA
Sbjct: 619 LQAALRADPKDCNCWESLGEAYLSRGGYTTALKSFMKASELNPDSTYSVFKVA 671
>gi|16265215|ref|NP_438007.1| TonB-dependent receptor protein [Sinorhizobium meliloti 1021]
gi|15141355|emb|CAC49867.1| hypothetical exported protein, TonB-dependent receptor protein
[Sinorhizobium meliloti 1021]
Length = 1200
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 21/175 (12%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+LE L+ L+ ++++ + +WN+LGL+ G +++ + +A+DP + NL
Sbjct: 423 DLEGALADLERALKTAPGSSSIWNSLGLVQGARGDNRAAEAAFKQAIALDPLDPVSHANL 482
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
I Y M ++ + + D + AL+ G
Sbjct: 483 AIQYMDEMRMAEAKREIDAALSVDPSFDVALV---------------------ARGRYHM 521
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
Q + A E LLA A+P ++ LA A+Y GD + + L+ A +L+PN
Sbjct: 522 QNGEADKAVEDLLAGSTANPAYSNAQLLLAAAHYEKGDRIPAAQALDNADRLDPN 576
>gi|390949282|ref|YP_006413041.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiocystis violascens DSM 198]
gi|390425851|gb|AFL72916.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiocystis violascens DSM 198]
Length = 883
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 114/289 (39%), Gaps = 53/289 (18%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL------------- 118
P +A LG YQ + AV SY KA EI ++D PE+
Sbjct: 197 PGDAETLNSLGRAYQSQQRLEDAVDSYRKALEI----QSD--SPEIWNNLGISQQSQGYP 250
Query: 119 --SLVQIHHAQCLLPES-SGDNSLDKEL-EPEELEEILSKLKESMQSDTRQAVVWNTLGL 174
+L A L P+ NS + L E +EE L+ ++ D + A N GL
Sbjct: 251 NQALASFERALTLQPDYVKAHNSRGRALRELGRVEEALACHDRALNLDPKNADAHNNRGL 310
Query: 175 ILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP 234
L+ GR+ +I+ + L + P + D + LG+A G +++ C++ + +
Sbjct: 311 TLMLLGRIGEAIASYTQALLLRPEDADTLIVLGLALSDVGRFDEALTCYKHALAIAPDSV 370
Query: 235 AALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWAN 294
A +N G + G + AC DQ AL DP A W+N
Sbjct: 371 PAYVN--------QGISMHYLGRDDTALACFDQ-------------ALSIDPDAIEAWSN 409
Query: 295 LANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSR----IKDAER 339
G + L +A +++P+ +A+A++ +KD +R
Sbjct: 410 RGIVMQHLGRKEEALTALNRALEIKPD-----FAMALNNRGNVLKDQDR 453
>gi|163794023|ref|ZP_02187996.1| TPR repeat [alpha proteobacterium BAL199]
gi|159180637|gb|EDP65156.1| TPR repeat [alpha proteobacterium BAL199]
Length = 619
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 21/150 (14%)
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
LG I L+ G + ++ ++ +A+ P + +GNLG+ Y + ++ CF+ + +
Sbjct: 43 LGTIALRGGEVSRALELIGHAVAIAPTDGMTVGNLGVVYLAQNKLIEAEDCFRRALDLEP 102
Query: 232 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 291
+ P N+A+ LL + E A Q AV++A + AA
Sbjct: 103 SQPELHANFASTLLAR----------GDRETALKAQRRAVDLASDS----------AAQR 142
Query: 292 WANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
+ NL N G + E A ++EPN
Sbjct: 143 F-NLGNVLVAVGRSAEGAEAYESALEIEPN 171
>gi|452964763|gb|EME69797.1| SPY protein [Magnetospirillum sp. SO-1]
Length = 794
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 95/261 (36%), Gaps = 33/261 (12%)
Query: 92 LKAVSSYEKAEEILLR---CEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEEL 148
L+A +AE LR CE D A L + AQ L ES G L P +
Sbjct: 81 LQAAGRLPEAEREFLRLRECEPDQAE-HRFGLGLVTSAQGRLAESIGHFRDGLALAPHDA 139
Query: 149 E---------EILSKLKESMQSDTRQAVV-------WNTLGLILLKSGRLQSSISVLSSL 192
E +L E++ + R A + LG L +GR +
Sbjct: 140 EACCNLGLAYRAAGRLDEAVDAFARAARLAPGLAKAHGNLGGALFAAGRWAEAAEAWKKA 199
Query: 193 LAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL-------- 244
L +DPN+ + +LGIA G ++++ + F+ + D HP N L
Sbjct: 200 LVLDPNHPEVEADLGIALANLGRLDEAVQAFERAVRLDPRHPVFHYNLGRALHDMGRLDE 259
Query: 245 -LCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 299
YG V+A A A+ G L + A A+ +P AH N +
Sbjct: 260 ACAVYGQVVALDPGHASAHLNRGVILRKQKNYAEAVAAYDRAIALEPGNAHAHLNRSKVL 319
Query: 300 YLTGDHRSSGKCLEKAAKLEP 320
Y G H+ + A L+P
Sbjct: 320 YDMGRHQEALASCRDAIALKP 340
>gi|410964078|ref|XP_003988583.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like
[Felis catus]
Length = 338
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 141/345 (40%), Gaps = 68/345 (19%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E+ EE ++ LK+S++ A +++L +L + R + + + + + P++ D N
Sbjct: 18 EKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQAGIKNCPDSSDLHNN 77
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
G+ +G E++ +Q I +H A++N G + G N+
Sbjct: 78 YGVFLVDTGSPEKAVAHYQQAITLSPSHHVAMVN--------LGRLYRSLGENS------ 123
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+A+E AL+ K A I + L YY TG + + + +AA L+P+
Sbjct: 124 -------LAEEWYKRALQVSRK-AEILSPLGALYYNTGRYEEALQIYREAAALQPSQREL 175
Query: 326 RYAVA-----VSRIKDAER------SQEP-----TEQLSWAGNEMASILREGDPV----Q 365
R A+A + + K+AE+ S+E LS ++ + D + Q
Sbjct: 176 RLALAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQERHDKALDAIDKALQ 235
Query: 366 IEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLL 425
++P K V+ F T+ N+L E LD+A E
Sbjct: 236 LKP-----------KDPKVVSELFFTKGNQLR---------EQNLLDKAF------ESYK 269
Query: 426 AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMVYCSSNL 470
AA++ +P A W N+ ++ G++ S+ E+ L + S L
Sbjct: 270 AAVELNPDQAQAWMNMGGIQHIKGNYVSARAYYERALQLVPDSKL 314
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 111/273 (40%), Gaps = 53/273 (19%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCL-- 129
P ++ H G+ G P KAV+ Y++A ++L HH +
Sbjct: 69 PDSSDLHNNYGVFLVDTGSPEKAVAHYQQA----------------ITLSPSHHVAMVNL 112
Query: 130 --LPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSIS 187
L S G+NSL +E K ++Q +R+A + + LG + +GR + ++
Sbjct: 113 GRLYRSLGENSLAEEW-----------YKRALQV-SRKAEILSPLGALYYNTGRYEEALQ 160
Query: 188 VLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK--------------CFQDL---ILKD 230
+ A+ P+ + L G +++ K C++ L K
Sbjct: 161 IYREAAALQPSQRELRLALAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQ 220
Query: 231 QNHPAAL--INYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ H AL I+ A L K V++ G L + + ++ A E AA++ +P
Sbjct: 221 ERHDKALDAIDKALQLKPKDPKVVSELFFTKGNQ--LREQNLLDKAFESYKAAVELNPDQ 278
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
A W N+ ++ G++ S+ E+A +L P+
Sbjct: 279 AQAWMNMGGIQHIKGNYVSARAYYERALQLVPD 311
>gi|332020166|gb|EGI60610.1| Tetratricopeptide repeat protein 37 [Acromyrmex echinatior]
Length = 1306
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 71/176 (40%), Gaps = 34/176 (19%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD-MEQSAKCFQDLI 227
W G I G S+ + + D NN +C+ LG Y + G+ +E+S +C+
Sbjct: 446 WLLFGKIYWDMGDYNHSLMAFLNGVQADRNNWECMVYLGHYYREHGNNIERSRRCY---- 501
Query: 228 LKDQNHPAALIN----YAALLLCKYGSVLAGAGAN-------TGEGA------------C 264
H A IN A + L +L AN T +G
Sbjct: 502 -----HAALQINPNSEEAGIGLSTAYRLLKNTDANIKLLQRVTMQGTGPRWAWLQLGLHY 556
Query: 265 LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
LDQ A A L ++ADP H W +LA+AY G H S+ K ++A +L P
Sbjct: 557 LDQGDA-GQAITALQHVIRADPNDNHCWESLADAYLARGAHASALKSYQRALQLSP 611
>gi|149048929|gb|EDM01383.1| rCG29705 [Rattus norvegicus]
Length = 519
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 139/338 (41%), Gaps = 54/338 (15%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E+ EE + LKES++ A +++L +L + R + + V + + P++ D N
Sbjct: 199 EKTEEAIVLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDVYQAGIKNCPDSSDLHNN 258
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
+ SG E++ +Q I +H A++N G + G N+
Sbjct: 259 YAVFLVDSGFPEKAVAHYQQAIQLSPSHHVAVVNL--------GRLHRSLGENS------ 304
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+A+E AL+ + A + + L YY TG H+ + + +A L+P+
Sbjct: 305 -------MAEEWYRRALQV-ARTAEVLSPLGALYYNTGRHKEALEVYREAVSLQPSQRDL 356
Query: 326 RYAVA-----VSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAV-- 378
R A+A + + K+AE+ + S + +P +E + +A+
Sbjct: 357 RLALAQVLAVMGQTKEAEK--------------ITSHIVSEEPRCLE---CYRLLSAIYS 399
Query: 379 QKTHHEVAAAFETEENELS-KMEECAGAGESAF-----LDQASAVNVAKECLLAALKADP 432
++ HHE A E E L K ++ E F L + + ++ A E AA+ DP
Sbjct: 400 KQEHHE--KALEAIEKALQLKPKDPKVISELFFTKGNQLREQNLLDKAFESYEAAVTLDP 457
Query: 433 KAAHIWANLANAYYLTGDHRSSGKCLEKVLMVYCSSNL 470
A W N+ ++ G + + E+ L + S L
Sbjct: 458 DQAQAWMNMGGIRHIQGSYVPARVYYERALRLVPESKL 495
>gi|418735677|ref|ZP_13292087.1| tetratricopeptide repeat protein [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|410748811|gb|EKR01705.1| tetratricopeptide repeat protein [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
Length = 1197
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/169 (17%), Positives = 75/169 (44%), Gaps = 23/169 (13%)
Query: 53 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 112
R+ ++ ++G + K P + ++H+ +G+++ + + ++ S++++ L D
Sbjct: 688 RKGEIDKAESGFKEILAKKPDSYYSHYQMGIIHLQRKKYEASIDSFDRS----LLLNTDF 743
Query: 113 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 172
+ + ++H SG+ L KE + + +MQ D+ + +
Sbjct: 744 VAARIGKGISMYH--------SGNKKLAKE-----------EFETAMQQDSANELAPYNI 784
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 221
G+IL +I++ ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAIAIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|222056573|ref|YP_002538935.1| hypothetical protein Geob_3491 [Geobacter daltonii FRC-32]
gi|221565862|gb|ACM21834.1| Tetratricopeptide TPR_2 repeat protein [Geobacter daltonii FRC-32]
Length = 264
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 78/198 (39%), Gaps = 22/198 (11%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E + +K ++ W +LG IL +SG+ + +I+ ++ + P D +LG+
Sbjct: 57 EAIESIKAGLKRAPEDIEAWTSLGDILFESGQHKEAIAAYKKVIELRPAEADGYVSLGLV 116
Query: 210 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 269
Y +E++ Q N L + L G + G G N DQA
Sbjct: 117 Y---NSLERADDALQAF-----NKALELDPHNVFALNALGDLYYGLGNN-------DQAI 161
Query: 270 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAV 329
E + DP A NL + +Y GD S+ K +A +L+PN + Y
Sbjct: 162 ------EAYRKGIALDPNDAAARFNLGDLFYDLGDLESAEKETLEAVRLDPN-FTMSYLT 214
Query: 330 AVSRIKDAERSQEPTEQL 347
+ D ER E T+
Sbjct: 215 LGNICIDQERLAEATKYF 232
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 27/184 (14%)
Query: 50 SSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCE 109
+ + E + S+K GL ++ P++ A LG + GQ +A+++Y+K E L E
Sbjct: 52 TGKQAEAIESIKAGL----KRAPEDIEAWTSLGDILFESGQHKEAIAAYKKVIE-LRPAE 106
Query: 110 ADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVW 169
AD +SL ++ NSL E ++ L ++++ D
Sbjct: 107 AD----GYVSLGLVY------------NSL------ERADDALQAFNKALELDPHNVFAL 144
Query: 170 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 229
N LG + G +I +A+DPN+ NLG ++ GD+E + K + +
Sbjct: 145 NALGDLYYGLGNNDQAIEAYRKGIALDPNDAAARFNLGDLFYDLGDLESAEKETLEAVRL 204
Query: 230 DQNH 233
D N
Sbjct: 205 DPNF 208
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 23/173 (13%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P NA +F LG G+ +A+ S + L R DI L + Q
Sbjct: 36 PDNAEGYFYLGEALAETGKQAEAIESIKAG---LKRAPEDIEAWTSLGDILFESGQH--- 89
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+E ++ K+ ++ +A + +LGL+ R ++ +
Sbjct: 90 -----------------KEAIAAYKKVIELRPAEADGYVSLGLVYNSLERADDALQAFNK 132
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
L +DP+N + LG Y+ G+ +Q+ + ++ I D N AA N L
Sbjct: 133 ALELDPHNVFALNALGDLYYGLGNNDQAIEAYRKGIALDPNDAAARFNLGDLF 185
>gi|116329905|ref|YP_799623.1| hypothetical protein LBJ_0121 [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|116123594|gb|ABJ74865.1| TPR-repeat-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 1197
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/169 (17%), Positives = 75/169 (44%), Gaps = 23/169 (13%)
Query: 53 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 112
R+ ++ ++G + K P + ++H+ +G+++ + + ++ S++++ L D
Sbjct: 688 RKGEIDKAESGFKEILAKKPDSYYSHYQMGIIHLQRKKYEASIDSFDRS----LLLNTDF 743
Query: 113 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 172
+ + ++H SG+ L KE + + +MQ D+ + +
Sbjct: 744 VAARIGKGISMYH--------SGNKKLAKE-----------EFETAMQQDSANELAPYNI 784
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 221
G+IL +I++ ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAIAIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|443665625|ref|ZP_21133648.1| glycosyl transferase 2 family protein [Microcystis aeruginosa
DIANCHI905]
gi|443331339|gb|ELS46001.1| glycosyl transferase 2 family protein [Microcystis aeruginosa
DIANCHI905]
Length = 396
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
E E+ E LS +++++ D A + LGL+L + RL SI L ++P+N
Sbjct: 282 EAEKYETALSVFEKTVEIDPSYADGYYNLGLVLKQLHRLPESIKAYKKALKLNPDNPTIY 341
Query: 204 GNLGIAYFQSGDMEQSAKCFQD--LILKDQ 231
NLG+AY G ++ + +Q +LKDQ
Sbjct: 342 QNLGVAYIVFGSYNEAIEIWQKGLQLLKDQ 371
>gi|410459952|ref|ZP_11313640.1| TPR -repeat containing protein [Bacillus azotoformans LMG 9581]
gi|409927790|gb|EKN64916.1| TPR -repeat containing protein [Bacillus azotoformans LMG 9581]
Length = 221
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 21/113 (18%)
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
+GI Y Q G E++A+ F +++ +D N P A IN +G++LA G N A
Sbjct: 7 IGIQYMQQGKYEEAARIFNEILEQDPNDPIAYIN--------FGNLLAAVGENVRAIAFF 58
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 318
++ A++ D A + N YY D+ + E+A KL
Sbjct: 59 NK-------------AIEIDDSLATAYFGAGNTYYNQEDYVKAKDNFEQAVKL 98
>gi|418405031|ref|ZP_12978461.1| TonB-dependent receptor protein [Sinorhizobium meliloti CCNWSX0020]
gi|359501020|gb|EHK73652.1| TonB-dependent receptor protein [Sinorhizobium meliloti CCNWSX0020]
Length = 1192
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 21/175 (12%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+LE L+ L+ ++++ + +WN+LGL+ G +++ + +A+DP + NL
Sbjct: 415 DLEGALADLERALKTAPGSSSIWNSLGLVQGARGDNRAAEAAFKQAIALDPLDPVSHANL 474
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
I Y M ++ + + D + AL+ G
Sbjct: 475 AIQYMDEMRMAEAKREIDAALSVDPSFDVALV---------------------ARGRYHM 513
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
Q + A E LLA A+P ++ LA A+Y GD + + L+ A +L+PN
Sbjct: 514 QNGEADKAVEDLLAGSTANPAYSNAQLLLAAAHYEKGDRIPAAQALDNADRLDPN 568
>gi|170693696|ref|ZP_02884854.1| TPR repeat-containing protein [Burkholderia graminis C4D1M]
gi|170141478|gb|EDT09648.1| TPR repeat-containing protein [Burkholderia graminis C4D1M]
Length = 615
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 86/209 (41%), Gaps = 36/209 (17%)
Query: 171 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ-DLILK 229
LG L G++ +I + L + P+ NLG AY +G E +A F+ L L+
Sbjct: 74 NLGNALKALGQIDEAIDQFRNALTLAPSFPMAHYNLGNAYAATGRHEDAADAFRRSLHLQ 133
Query: 230 DQN----------------HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNV 273
+ H A+ ++ L + G AGA G L+ +
Sbjct: 134 PDDASSHNNLGNALHALGRHEEAIASFRRTLELRPGH----AGALNNMGMSLNALGRADE 189
Query: 274 AKECLLAALKADPK--AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAV-- 329
A C AAL A+P+ AAH NLAN + TG H + E A L+PN Y +
Sbjct: 190 AIPCFKAALAAEPRFVAAHF--NLANTFDATGRHAQAVASFEAALALQPNLPPAIYGMGN 247
Query: 330 ---AVSRIKDA----ERSQ--EPTEQLSW 349
A+ R +A ERS +P L+W
Sbjct: 248 ALAALGRHTEAIPYLERSVGLDPQFALAW 276
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 76/189 (40%), Gaps = 13/189 (6%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
E+ + S+ A N LG L GR + +I+ L + P + + N+G+
Sbjct: 120 EDAADAFRRSLHLQPDDASSHNNLGNALHALGRHEEAIASFRRTLELRPGHAGALNNMGM 179
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYA---------ALLLCKYGSVLA----GA 255
+ G +++ CF+ + + AA N A A + + + LA
Sbjct: 180 SLNALGRADEAIPCFKAALAAEPRFVAAHFNLANTFDATGRHAQAVASFEAALALQPNLP 239
Query: 256 GANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 315
A G G L A L ++ DP+ A W +L A+ G H ++ + ++A
Sbjct: 240 PAIYGMGNALAALGRHTEAIPYLERSVGLDPQFALAWLSLGTAHQALGAHATALRAFDQA 299
Query: 316 AKLEPNCMS 324
+L+P+ S
Sbjct: 300 LRLQPDLAS 308
>gi|124486883|ref|NP_001074821.1| tetratricopeptide repeat protein 37 [Mus musculus]
gi|162318356|gb|AAI56422.1| Tetratricopeptide repeat domain 37 [synthetic construct]
Length = 1563
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 134 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL--GLILLKSGRLQSSISVLSS 191
SG ++D LE E+ E L+ L Q + A W L GL LK+G+ +++ L +
Sbjct: 530 SGAAAVDLSLELEDTETALAILTAVTQKASAGAAKWAWLRRGLYHLKAGQHSQAVADLQA 589
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 223
L DP +C+C +LG AY G + K F
Sbjct: 590 ALRADPKDCNCWESLGEAYLSRGGYTTALKSF 621
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 278 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
L AAL+ADPK + W +L AY G + ++ K KA++L P+ + + VA
Sbjct: 587 LQAALRADPKDCNCWESLGEAYLSRGGYTTALKSFMKASELNPDSTYSVFKVA 639
>gi|421095316|ref|ZP_15556029.1| tetratricopeptide repeat protein [Leptospira borgpetersenii str.
200801926]
gi|410362026|gb|EKP13066.1| tetratricopeptide repeat protein [Leptospira borgpetersenii str.
200801926]
Length = 1197
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/169 (17%), Positives = 75/169 (44%), Gaps = 23/169 (13%)
Query: 53 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 112
R+ ++ ++G + K P + ++H+ +G+++ + + ++ S++++ L D
Sbjct: 688 RKGEIDKAESGFKEILAKKPDSYYSHYQMGIIHLQRKKYEASIDSFDRS----LLLNTDF 743
Query: 113 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 172
+ + ++H SG+ L KE + + +MQ D+ + +
Sbjct: 744 VAARIGKGISMYH--------SGNKKLAKE-----------EFETAMQQDSANELAPYNI 784
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 221
G+IL +I++ ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAIAIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|334320210|ref|YP_004556839.1| FecR protein [Sinorhizobium meliloti AK83]
gi|407722853|ref|YP_006842514.1| FecR protein [Sinorhizobium meliloti Rm41]
gi|334097949|gb|AEG55959.1| FecR protein [Sinorhizobium meliloti AK83]
gi|407322913|emb|CCM71514.1| FecR protein [Sinorhizobium meliloti Rm41]
Length = 1197
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 21/175 (12%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+LE L+ L+ ++++ + +WN+LGL+ G +++ + +A+DP + NL
Sbjct: 423 DLEGALADLERALKTAPGSSSIWNSLGLVQGARGDNRAAEAAFKQAIALDPLDPVAHANL 482
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
I Y M ++ + + D + AL+ G
Sbjct: 483 AIQYMDEMRMAEAKREIDAALSVDPSFDVALV---------------------ARGRYHM 521
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
Q + A E LLA A+P ++ LA A+Y GD + + L+ A +L+PN
Sbjct: 522 QNGEADNAVEDLLAGSTANPAYSNAQLLLAAAHYEKGDRIPAAQALDNADRLDPN 576
>gi|193213026|ref|YP_001998979.1| TPR repeat-containing protein [Chlorobaculum parvum NCIB 8327]
gi|193086503|gb|ACF11779.1| TPR repeat-containing protein [Chlorobaculum parvum NCIB 8327]
Length = 536
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/245 (18%), Positives = 87/245 (35%), Gaps = 33/245 (13%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
+ + +S + ++Q + WN LG + +G +I + + NN N
Sbjct: 269 QNAQNAISAFQNAVQIKPDNSKAWNDLGFAYVVAGMKLEAIEAYKKSILTNQNNAAAWQN 328
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
+GI Y + GD++ + + FQ + ++ +A +N G L
Sbjct: 329 IGILYLKKGDLDMATESFQQAVQIKPDYLSAWVNL---------------------GISL 367
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ A + A+ + + IW NL AY G+ S A ++ PN +
Sbjct: 368 QANGSPKEAIQAFTKAISINGNNSVIWNNLGLAYRDNGNVDQSIDAFRHALQINPNYDTA 427
Query: 326 RYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEV 385
R +A T +L+ +E + + + + AW +H+
Sbjct: 428 RNNLA------------ETYRLTGRVDESINTYIQSTEINLNDSTAWQALGDAYTKNHQS 475
Query: 386 AAAFE 390
A E
Sbjct: 476 DKALE 480
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 75/170 (44%), Gaps = 23/170 (13%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P N+ A LG Y G L+A+ +Y+K+ +L + + A + + ++
Sbjct: 286 PDNSKAWNDLGFAYVVAGMKLEAIEAYKKS---ILTNQNNAAAWQNIGILY--------- 333
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
L+ +L+ ++++Q W LG+ L +G + +I +
Sbjct: 334 -----------LKKGDLDMATESFQQAVQIKPDYLSAWVNLGISLQANGSPKEAIQAFTK 382
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYA 241
++++ NN NLG+AY +G+++QS F+ + + N+ A N A
Sbjct: 383 AISINGNNSVIWNNLGLAYRDNGNVDQSIDAFRHALQINPNYDTARNNLA 432
>gi|163782812|ref|ZP_02177808.1| hypothetical protein HG1285_15791 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881933|gb|EDP75441.1| hypothetical protein HG1285_15791 [Hydrogenivirga sp. 128-5-R1-1]
Length = 546
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 103/265 (38%), Gaps = 44/265 (16%)
Query: 56 KVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARP 115
++ K L A P N ++LLG +Y G+ +A+ ++A +I EA
Sbjct: 133 RMKEAKEVLQRFAELSPNNPFPYYLLGQLYLSEGKVDRAIEYLQRALDIRKTFEA----- 187
Query: 116 ELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLI 175
++L +I+ E S S E E+L S LKE + R A+ L +
Sbjct: 188 AFVTLGKIY-------ERSERFS-----EAEKLYR--SILKED--PNNRSAL--EKLAQL 229
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
+ +GR+Q + + L +DP N + QSG+ E++ + +L + HP
Sbjct: 230 YMATGRIQEAKELYERLYRIDPTNYQYKHQFAVTLLQSGEFERAKEILAELY---RLHPE 286
Query: 236 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 295
L Y LA E A E K PK I L
Sbjct: 287 DLN-------VSYSYALALELTGNPEKAL-----------EIYEKLHKLVPKNQRIIERL 328
Query: 296 ANAYYLTGDHRSSGKCLEKAAKLEP 320
AN Y + G ++ + + +EK +L P
Sbjct: 329 ANTYIILGRYKEAEELIEKGLQLNP 353
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 69/168 (41%), Gaps = 23/168 (13%)
Query: 177 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 236
+KSGR++ + VL + PNN LG Y G ++++ + Q + + AA
Sbjct: 129 IKSGRMKEAKEVLQRFAELSPNNPFPYYLLGQLYLSEGKVDRAIEYLQRALDIRKTFEAA 188
Query: 237 LINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 296
+ G +++ + A++ + LK DP LA
Sbjct: 189 FVTL---------------------GKIYERSERFSEAEKLYRSILKEDPNNRSALEKLA 227
Query: 297 NAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK--DAERSQE 342
Y TG + + + E+ +++P ++ AV+ ++ + ER++E
Sbjct: 228 QLYMATGRIQEAKELYERLYRIDPTNYQYKHQFAVTLLQSGEFERAKE 275
>gi|451982583|ref|ZP_21930892.1| exported hypothetical protein, contains TPR repeats [Nitrospina
gracilis 3/211]
gi|451760229|emb|CCQ92187.1| exported hypothetical protein, contains TPR repeats [Nitrospina
gracilis 3/211]
Length = 395
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 64/155 (41%), Gaps = 16/155 (10%)
Query: 183 QSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAA 242
Q I+ +S L DP + D LGIAY G+ + A +D I ++NH AL +
Sbjct: 27 QRRIAEYASRLQTDPQDADAHFQLGIAYLSMGNWKAGASHLKDTIRLNKNHTQALRD-LG 85
Query: 243 LLLCKYGSVLAGAG-------ANTGEGACLDQASAVNVAKECLLAALK--------ADPK 287
L + G + A N + + AV +A+E AA+ DP
Sbjct: 86 WALYQMGDLAAAEKWLRQSYRLNAKDPKTVANLGAVLIARERYSAAVAVLDNSVPGGDPA 145
Query: 288 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
I NLA AY G+ + L A++L PN
Sbjct: 146 HFQIHNNLAIAYRHLGEKTKAANQLRIASRLAPNV 180
>gi|298710892|emb|CBJ26401.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase,
family GT41 [Ectocarpus siliculosus]
Length = 1080
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 119/311 (38%), Gaps = 27/311 (8%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
+N L ++ G + +I L ++ D NLG Y G + ++ +C+ + I
Sbjct: 143 YNNLASAYMQLGHTKEAIETYQMALVLNRGLVDAHSNLGNLYKAQGMLAEAKRCYLEAIR 202
Query: 229 KDQNHPAALINYAALL---------LCKYGSVLA----GAGANTGEGACLDQASAVNVAK 275
+ A N A + + Y + A A++ G L + V+ A
Sbjct: 203 IQPSFAIAWSNLAGIFKEEGNLTTAVAYYREAIRLCPEFADAHSNLGNVLKERGLVHDAM 262
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 335
+C A+K P A + NLA+ YY G + K A +LEPN + A + +
Sbjct: 263 QCYQTAIKLRPDFAIAYGNLASCYYDCGCQDLAIKTFRYAIQLEPN-----FPDAYNNLG 317
Query: 336 DAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENE 395
+A R + QL A N + LR ++ + P A+ K + A
Sbjct: 318 NALRE---SGQLEEAINCYRTTLR----LKPDHPHAYNNLGNAMKDKGLIKEAIHCYVTA 370
Query: 396 LSKMEECAGAGES--AFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRS 453
+ M + A + + L + + A A+ DP A ++N+ NAY G
Sbjct: 371 VQLMPKFAAVHSNLGSVLKEQGKLAHALAHYHEAIAIDPGFADAYSNMGNAYKDMGRLPE 430
Query: 454 SGKCLEKVLMV 464
+ KC + +
Sbjct: 431 AIKCYSAAINI 441
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 13/183 (7%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
+ + ++Q + +N LG L +SG+L+ +I+ + L + P++ NLG A
Sbjct: 296 IKTFRYAIQLEPNFPDAYNNLGNALRESGQLEEAINCYRTTLRLKPDHPHAYNNLGNAMK 355
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAALL---------LCKYGSVLA----GAGAN 258
G ++++ C+ + A N ++L L Y +A A A
Sbjct: 356 DKGLIKEAIHCYVTAVQLMPKFAAVHSNLGSVLKEQGKLAHALAHYHEAIAIDPGFADAY 415
Query: 259 TGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 318
+ G + A +C AA+ P A ++NLA+AY D + C KA L
Sbjct: 416 SNMGNAYKDMGRLPEAIKCYSAAINIKPTFADAFSNLASAYKEGNDVLQAIACYRKALSL 475
Query: 319 EPN 321
P+
Sbjct: 476 RPD 478
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 67/174 (38%), Gaps = 25/174 (14%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
A+ + L G +I + ++PN D NLG A +SG +E++ C++
Sbjct: 276 AIAYGNLASCYYDCGCQDLAIKTFRYAIQLEPNFPDAYNNLGNALRESGQLEEAINCYRT 335
Query: 226 LILKDQNHPAALINY-------------------AALLLCKYGSVLAGAGANTGEGACLD 266
+ +HP A N A L+ K+ +V + G+ E L
Sbjct: 336 TLRLKPDHPHAYNNLGNAMKDKGLIKEAIHCYVTAVQLMPKFAAVHSNLGSVLKEQGKLA 395
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
A A A+ DP A ++N+ NAY G + KC A ++P
Sbjct: 396 HALA------HYHEAIAIDPGFADAYSNMGNAYKDMGRLPEAIKCYSAAINIKP 443
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 114/322 (35%), Gaps = 63/322 (19%)
Query: 157 ESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 216
E+++ A+ W+ L I + G L ++++ + + P D NLG + G +
Sbjct: 199 EAIRIQPSFAIAWSNLAGIFKEEGNLTTAVAYYREAIRLCPEFADAHSNLGNVLKERGLV 258
Query: 217 EQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGE--------------- 261
+ +C+Q I + P I Y L C Y T
Sbjct: 259 HDAMQCYQTAI---KLRPDFAIAYGNLASCYYDCGCQDLAIKTFRYAIQLEPNFPDAYNN 315
Query: 262 -GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
G L ++ + A C L+ P H + NL NA G + + C A +L P
Sbjct: 316 LGNALRESGQLEEAINCYRTTLRLKPDHPHAYNNLGNAMKDKGLIKEAIHCYVTAVQLMP 375
Query: 321 NCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQK 380
++A S + + Q G ++ + + I+P GFA
Sbjct: 376 -----KFAAVHSNLGSVLKEQ---------GKLAHALAHYHEAIAIDP-----GFA---D 413
Query: 381 THHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWAN 440
+ + A++ ++ ++ E A +C AA+ P A ++N
Sbjct: 414 AYSNMGNAYK----DMGRLPE------------------AIKCYSAAINIKPTFADAFSN 451
Query: 441 LANAYYLTGDHRSSGKCLEKVL 462
LA+AY D + C K L
Sbjct: 452 LASAYKEGNDVLQAIACYRKAL 473
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
++ ++ D A ++ LG L + G + +I + + P CD NL AY Q G
Sbjct: 96 QQCIRIDPNFAEAYSNLGNALKELGDVGGAIQFYLKAVKLKPRFCDAYNNLASAYMQLGH 155
Query: 216 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 275
+++ + +Q AL+L + G V A++ G + AK
Sbjct: 156 TKEAIETYQ----------------MALVLNR-GLV----DAHSNLGNLYKAQGMLAEAK 194
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
C L A++ P A W+NLA + G+ ++ +A +L P
Sbjct: 195 RCYLEAIRIQPSFAIAWSNLAGIFKEEGNLTTAVAYYREAIRLCP 239
>gi|198283711|ref|YP_002220032.1| type IV pilus biogenesis/stability protein PilW [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|198248232|gb|ACH83825.1| type IV pilus biogenesis/stability protein PilW [Acidithiobacillus
ferrooxidans ATCC 53993]
Length = 255
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 68/164 (41%), Gaps = 19/164 (11%)
Query: 158 SMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDME 217
S SD +A ++ +LG L+ G + +I L +A + D +G+AY Q +
Sbjct: 28 SANSDKAKAGIYTSLGTAYLQDGHPRQAIRELQLAIAANSRYADAYNVMGLAYEQLQQRD 87
Query: 218 QSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKEC 277
+ F+ + D +P L NY A L+ N GE AV K
Sbjct: 88 LARNAFRRALSLDAKNPEYLNNYGAFLIN---------SRNYGE--------AVIELKRA 130
Query: 278 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
L + P+ A W NLA AY D ++ L++A L PN
Sbjct: 131 TSDPLYSTPQFA--WTNLAQAYAGLKDLSAARDALDRALYLVPN 172
>gi|296411907|ref|XP_002835670.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629458|emb|CAZ79827.1| unnamed protein product [Tuber melanosporum]
Length = 309
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
ELE +L + ++ ++ D + +LL GR + I L+SLL+ PN+ + +L
Sbjct: 102 ELESVLQRYQDILKEDPTNMPIEKRRISLLLSLGRTEDGIEALTSLLSHSPNDAESWAHL 161
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGA-GANTGE 261
YF G +QS C ++++L P A +A + Y S AGA G N E
Sbjct: 162 SSLYFTQGLYQQSVFCLEEVLLI---LPNAYNIFARIGEVTYISASAGASGTNQTE 214
>gi|409408369|ref|ZP_11256804.1| TPR repeat-containing protein [Herbaspirillum sp. GW103]
gi|386431691|gb|EIJ44519.1| TPR repeat-containing protein [Herbaspirillum sp. GW103]
Length = 691
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
+ + + + + W+ LG+IL +SG+ ++ + L + A+ P N + NLG + + G
Sbjct: 95 RRATEQEPQLVAAWSNLGIILQESGKFEAGLQCLERVAALQPENAEVFNNLGNTFVRLGR 154
Query: 216 MEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVLAGA 255
++Q+ + + + ++ A N A LL L +Y +A A
Sbjct: 155 LDQAQESYARALTLHPSYAEAHSNLAYLLHDLGRYDEAIAAA 196
>gi|386811938|ref|ZP_10099163.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386404208|dbj|GAB62044.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 258
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 69/199 (34%), Gaps = 47/199 (23%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
W+ LG L G +I L + P+N N GIA ++ G+ E++ K + I
Sbjct: 52 WDGLGSALYCLGNYDMAIQAYDKALTIKPDNYTTWVNKGIALYKKGNHEEALKLYNKAIE 111
Query: 229 KDQNHPAALIN------------------------------------YAALLLCKYGSVL 252
D +A N Y +LL +Y L
Sbjct: 112 SDPKLSSAWYNKGVIFIALGRNTEAMWAFEKAIAISPQDDLAWHGKGYLLILLERYEEAL 171
Query: 253 ------AGAGANTGE-----GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYL 301
A N G G LD+ + A + A+ +PK+A W N AN Y
Sbjct: 172 QLFTKAAQGNPNRGWAWNNMGITLDKLHMYDEAIKAFDKAIDINPKSARAWHNKANTLYS 231
Query: 302 TGDHRSSGKCLEKAAKLEP 320
G + S + KA L+P
Sbjct: 232 QGKYEESMRTYNKAVALDP 250
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 82/215 (38%), Gaps = 18/215 (8%)
Query: 260 GEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLE 319
G G+ L ++A + AL P W N A Y G+H + K KA + +
Sbjct: 54 GLGSALYCLGNYDMAIQAYDKALTIKPDNYTTWVNKGIALYKKGNHEEALKLYNKAIESD 113
Query: 320 PNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAW--AGFAA 377
P S Y V I TE + WA + +I + D +AW G+
Sbjct: 114 PKLSSAWYNKGVIFIALGRN----TEAM-WAFEKAIAISPQDD-------LAWHGKGYLL 161
Query: 378 VQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHI 437
+ +E A T+ + + A LD+ + A + A+ +PK+A
Sbjct: 162 ILLERYEEALQLFTKAAQGNPNRGWAWNNMGITLDKLHMYDEAIKAFDKAIDINPKSARA 221
Query: 438 WANLANAYYLTGDHRSSGKCLEKVL----MVYCSS 468
W N AN Y G + S + K + ++Y +S
Sbjct: 222 WHNKANTLYSQGKYEESMRTYNKAVALDPLLYANS 256
>gi|326431610|gb|EGD77180.1| hypothetical protein PTSG_08273 [Salpingoeca sp. ATCC 50818]
Length = 693
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 20/173 (11%)
Query: 81 LGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLD 140
+GL+ G+ A++ YE A I LR E D ++ +H + +S G+
Sbjct: 276 VGLVLDDFGEYDGAIAFYETALPIYLRTEGDKGE----NVAGLHGNLGIAYDSKGEYDKA 331
Query: 141 KELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAV----- 195
E + L ++ L E S A +N LG + G +I + LA+
Sbjct: 332 VEFYEKALAIMVETLGEKHPS---TADTYNNLGNTYDRKGDYDRAIELYEKALAIYVETL 388
Query: 196 ---DPNNCDCIGNLGIAYFQSGDMEQSAKCFQ-DLILK----DQNHPAALINY 240
P+ D GNLGIAY GD +++ + DL + + HP+ Y
Sbjct: 389 GEKHPSTADTYGNLGIAYHSKGDYDRAIHFHEKDLAITVEALGEKHPSTAQTY 441
>gi|307154454|ref|YP_003889838.1| hypothetical protein Cyan7822_4657 [Cyanothece sp. PCC 7822]
gi|306984682|gb|ADN16563.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
Length = 434
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 78/182 (42%), Gaps = 26/182 (14%)
Query: 66 HVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHH 125
V R+ PK AHA++ G+ Y +G +A+ Y +A + P LL I +
Sbjct: 273 QVIRRQPKEAHAYYGRGINYAEIGSFQQAIDDYIQATNL---------NPRLL----ITN 319
Query: 126 AQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSS 185
LL G N L + E IL +++Q + +V ++ G I + + +
Sbjct: 320 FDVLL----GRNPL------KNAEAILQPFNQAIQENPVSSVAYHNRGNIRYQLKDYRGA 369
Query: 186 ISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKC--FQDLILKDQNHPAALINYAAL 243
I + + D N N G+A +Q GD +Q AK Q +IL Q AA + A
Sbjct: 370 IEDYTLAIRFDNNYALAYNNRGVARYQVGD-KQGAKADLQQAVILFQQQKDAAKVQQALA 428
Query: 244 LL 245
+L
Sbjct: 429 VL 430
>gi|83311456|ref|YP_421720.1| SPY protein [Magnetospirillum magneticum AMB-1]
gi|82946297|dbj|BAE51161.1| SPY protein [Magnetospirillum magneticum AMB-1]
Length = 798
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 13/165 (7%)
Query: 170 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 229
LG L +GR ++ LA++PN+ + ++G+A + G E++A+CF+ +
Sbjct: 176 GNLGGALFAAGRWADAVGAWGRALALEPNHAEVRADMGVALAKLGRQEEAAECFRRAMEL 235
Query: 230 DQNHPAALINYAALL--LCK-------YGSVLA----GAGANTGEGACLDQASAVNVAKE 276
D +PA N L L + Y V+A A A+ G + + A
Sbjct: 236 DPGNPAHGYNLGRALQDLGRLEDAAEIYAKVIAVAPDHASAHMNSGVIFKKLGQPDQAVA 295
Query: 277 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
L+ DP W N A Y G + A +L P+
Sbjct: 296 SYDRVLELDPANGPAWLNRGKALYEAGRVEDALDSFRSALRLMPD 340
>gi|416009428|ref|ZP_11561251.1| TPR domain/sulfotransferase domain protein [Acidithiobacillus sp.
GGI-221]
gi|339836569|gb|EGQ64152.1| TPR domain/sulfotransferase domain protein [Acidithiobacillus sp.
GGI-221]
Length = 695
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
+E++ D + + WN LG++L + GR S L + A +P N + NLG + D
Sbjct: 104 REALARDPQLSGAWNNLGILLQEMGRFDESREYLERVRAAEPKNPKVLNNLGNTCLRQRD 163
Query: 216 MEQSAKCFQDLILKDQNHPAALINYAALL 244
+ + ++ + D +P N A LL
Sbjct: 164 FSSAEQYWRQAMALDPAYPQPYSNLAKLL 192
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 97/258 (37%), Gaps = 33/258 (12%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
L+ + L+++ S AV W+ L +L + G+L LA DP NLG
Sbjct: 62 LDPAIEYLRQACASPQAAAVYWSNLAEMLRQRGQLAEGERAAREALARDPQLSGAWNNLG 121
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 267
I + G ++S + + + + +P L N NT CL Q
Sbjct: 122 ILLQEMGRFDESREYLERVRAAEPKNPKVLNNL----------------GNT----CLRQ 161
Query: 268 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 327
+ A++ A+ DP ++NLA G+ ++ + +A L+P+
Sbjct: 162 RD-FSSAEQYWRQAMALDPAYPQPYSNLAKLLTDRGETEAAIEAGRRAITLDPHLTDAYI 220
Query: 328 AVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAA 387
+A + + ER Q P L W +A R G AW+ A + K +
Sbjct: 221 NLAAA---EQER-QNPAAALRWVEALLAFQPRNGQ--------AWSTKATLLKEAERLPE 268
Query: 388 AFETEENELSKMEECAGA 405
A + E + E A A
Sbjct: 269 ALQAAEQAVQHAPESADA 286
>gi|159029464|emb|CAO87611.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 403
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
E E+ E LS +++++ D A + LGL+L + RL SI L ++P+N
Sbjct: 289 EAEKYETALSVFEKTVEIDPSYADGYYNLGLVLKQLHRLPESIKAYKKALKLNPDNPTIY 348
Query: 204 GNLGIAYFQSGDMEQSAKCFQD--LILKDQ 231
NLG+AY G ++ + +Q +LKDQ
Sbjct: 349 QNLGVAYIVFGSYNEAIEIWQKGLQLLKDQ 378
>gi|218666334|ref|YP_002426340.1| type IV pilus biogenesis/stability protein PilW [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|218518547|gb|ACK79133.1| type IV pilus biogenesis/stability protein PilW [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 249
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 68/164 (41%), Gaps = 19/164 (11%)
Query: 158 SMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDME 217
S SD +A ++ +LG L+ G + +I L +A + D +G+AY Q +
Sbjct: 22 SANSDKAKAGIYTSLGTAYLQDGHPRQAIRELQLAIAANSRYADAYNVMGLAYEQLQQRD 81
Query: 218 QSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKEC 277
+ F+ + D +P L NY A L+ N GE AV K
Sbjct: 82 LARNAFRRALSLDAKNPEYLNNYGAFLINS---------RNYGE--------AVIELKRA 124
Query: 278 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
L + P+ A W NLA AY D ++ L++A L PN
Sbjct: 125 TSDPLYSTPQFA--WTNLAQAYAGLKDLSAARDALDRALYLVPN 166
>gi|145478081|ref|XP_001425063.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392131|emb|CAK57665.1| unnamed protein product [Paramecium tetraurelia]
Length = 1339
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 106/277 (38%), Gaps = 36/277 (12%)
Query: 64 LVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQI 123
L+ A ++ + + H G++ Q+ Q KA+SSY+ A ++L P
Sbjct: 1052 LLQKASQIKDSPYIHNAYGIIAQKQKQTDKAISSYQMAIQLL---------PTF------ 1096
Query: 124 HHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQ 183
QCL N +E E+ + L LK+++++D A N LG++ K +L+
Sbjct: 1097 --PQCL------SNQATLLIETEKYSQALDLLKQALKTDQNNAEAHNNLGVLYYKQNKLE 1148
Query: 184 SSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL 243
S + + + +N + N G+ + D Q+ +CF + I + A N
Sbjct: 1149 LSQNEYMEAIKLKVHNPEAHSNQGVIFCAKQDYSQALQCFDEAIKLKSDFVKAYHNKGTT 1208
Query: 244 LLCK---------YGSVLAGAGAN----TGEGACLDQASAVNVAKECLLAALKADPKAAH 290
L K Y + + + L + A L A K P+ A
Sbjct: 1209 LYEKENFKEAVEIYDRAIKAKTQDPETYYNKSIALQGLEQFDDALNALEQAYKLAPEMAL 1268
Query: 291 IWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 327
++ Y G + K + A +L+PNC Y
Sbjct: 1269 LYVEKGTLMYRKGKVDEAIKNYDLAIQLQPNCAEAYY 1305
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 38/199 (19%), Positives = 81/199 (40%), Gaps = 20/199 (10%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
EE + +L+++++ + N + L+ R ++++L ++ +DPN N G
Sbjct: 773 EEAIKELEKAIKLSPNNPTLLNNKAVTLIDLKRQDEALTILDEVINIDPNFFKAYNNKGT 832
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYA-----------ALLLCKYGSVLAGAGA 257
YF ++ Q+ + F + + + +A IN + A+ C+ S +
Sbjct: 833 IYFNQKNLTQAQQYFSRAVEINPEYDSARINLSITFQEMGEYQQAVQQCELISNQQWLNS 892
Query: 258 NT----GEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
N+ L A++ AL+ +P+ + L Y G + + KC +
Sbjct: 893 NSEALIAFATSLRNCDRFEEARQKYEVALQLNPRHSQAQNGLGIVYSNIGQYEDALKCYD 952
Query: 314 KAAKLEPNCMSTRYAVAVS 332
+A L + RY A++
Sbjct: 953 QAINL-----NNRYPEALN 966
>gi|159477305|ref|XP_001696751.1| PsbB mRNA maturation factor [Chlamydomonas reinhardtii]
gi|20532161|sp|Q9FNS4.1|MBB1_CHLRE RecName: Full=PsbB mRNA maturation factor Mbb1, chloroplastic;
Flags: Precursor
gi|11990205|emb|CAC19558.1| Mbb1 protein [Chlamydomonas reinhardtii]
gi|158275080|gb|EDP00859.1| PsbB mRNA maturation factor [Chlamydomonas reinhardtii]
Length = 662
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/256 (19%), Positives = 100/256 (39%), Gaps = 53/256 (20%)
Query: 65 VHVARKMPK--NAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ 122
+ R+ P+ NA+ + LG M +LG+ +A S +E+ E + V
Sbjct: 257 IQRCRRKPQSQNAYLYNALGCMAAQLGRVGEARSWFEEGTRSA----------EGAASVA 306
Query: 123 IHHAQCLLPESSGDNSLDKELEPEEL-----------------------EEILSKLKESM 159
+ A +L GD ++ + L + L + L+ L+
Sbjct: 307 LWQAWAVLEAKQGDPTVVRYLFRKALGANPRSRYVHLAWALWERRQGNPQHCLALLRRGC 366
Query: 160 QSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 219
+ + ++ L+ ++GR++ + + L DP++ G+ + G+M+++
Sbjct: 367 ELNPTDPALYQAWALVEKQAGRIERARELFEQGLRADPSDLYMWQAYGVMEAEQGNMDRA 426
Query: 220 AKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLL 279
+ FQ+ + D P+ + + A GA QA V A+E
Sbjct: 427 RQLFQEGVWADPRSPSTVYVFHAW------------------GALEWQAGNVQTARELFK 468
Query: 280 AALKADPKAAHIWANL 295
AA++ DPK+ WA+
Sbjct: 469 AAVRVDPKSETTWASW 484
>gi|425466629|ref|ZP_18845927.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
gi|389830795|emb|CCI26971.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
Length = 403
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
E E+ E LS +++++ D A + LGL+L + RL SI L ++P+N
Sbjct: 289 EAEKYETALSIFEKTVEIDPSYADGYYNLGLVLKQLHRLPESIKAYKKALKLNPDNPTIY 348
Query: 204 GNLGIAYFQSGDMEQSAKCFQD--LILKDQ 231
NLG+AY G ++ + +Q +LKDQ
Sbjct: 349 QNLGVAYIAFGSYNEAIEIWQKGLQLLKDQ 378
>gi|398335102|ref|ZP_10519807.1| hypothetical protein LkmesMB_05250 [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 1197
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/192 (18%), Positives = 84/192 (43%), Gaps = 27/192 (14%)
Query: 53 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 112
R+ ++ + G + K P + ++H+ +G+++ + + ++ S++++ L AD
Sbjct: 688 RKGELDKAEAGFKEILSKKPDSYYSHYQMGIIHLQRKKYDASIDSFDRS----LLLNADF 743
Query: 113 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 172
+ + +H SG+ L KE + + +MQ D+ + +
Sbjct: 744 VAARIGKGISTYH--------SGNKKLAKE-----------EFEAAMQQDSANELAPYNI 784
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
G+IL +I++ ++ +P D + Y++ GD+EQ+ K + + ++N
Sbjct: 785 GIILFNDNLYNEAITIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEKEIRKALDLERN 844
Query: 233 HPAALINYAALL 244
IN AL+
Sbjct: 845 E----INLFALI 852
>gi|451981544|ref|ZP_21929896.1| hypothetical protein NITGR_590036 [Nitrospina gracilis 3/211]
gi|451761217|emb|CCQ91160.1| hypothetical protein NITGR_590036 [Nitrospina gracilis 3/211]
Length = 660
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 132/333 (39%), Gaps = 48/333 (14%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A H LGL++ R A +++E A + L E D A L +L H + L
Sbjct: 119 PDYALPHNNLGLLHARRQDFEGARAAFETA--MRLDPEYDQAHYNLGNLY-FDHQKYALA 175
Query: 132 ESSGDNSL----DKELEPEEL----------EEILSKLKESMQSDTRQAVVWNTLGLILL 177
E + SL D EL EE + +ES+ D + +LG + +
Sbjct: 176 EKAYKESLRLNPDSAFTHHELGNLYHHLGRYEEAEQEFQESLFLDPKLEAAHVSLGNLYV 235
Query: 178 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL 237
+ RL + ++ L++D N+ D +L + +FQSG EQ+ K ++ + ++ ++ +
Sbjct: 236 DTDRLNDAEDAINKALSIDSNSVDARHSLALIHFQSGLFEQAEKEWRACLRREPDNASFY 295
Query: 238 INYAALL---------LCKYGSVLAGAGANT----GEGACLDQASAVNVAKECLLAALKA 284
N L + Y A N G + A++ L AL+
Sbjct: 296 NNLGNSLSSMERYEEAIETYQKAFALEPDNPLPLFNLGLVYEDLDRFQEAEDNYLHALRL 355
Query: 285 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAER----- 339
+P+ N+AN Y G + L +A +L+ + +A I + ER
Sbjct: 356 NPQHLSALVNIANLYSNLGRSEEAIPYLRQALELDSKHAKAHFGMAC--ILEDERKFLQA 413
Query: 340 --------SQEPTEQLSWAGNEMASI-LREGDP 363
QEP Q +W ++ S+ L G+P
Sbjct: 414 EQHLCNVLDQEPDNQFAW--RKLGSVHLESGNP 444
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 25/169 (14%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARP-ELLSLVQIHHAQCLL 130
P +F LG+ +Q L P A ++Y KA L + D A L L+ H
Sbjct: 459 PHEPVHYFYLGVTHQDLDDPRSAETAYLKA----LHLQPDNASVCNNLGLLYSHE----- 509
Query: 131 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
++ E E L L+E++ LGL+L + GR + +V
Sbjct: 510 ---------ERYAEAERL------LREALLHAPEDINALYNLGLVLDRIGRFDEAETVYR 554
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 239
L V P++ NLG+A F ++++ + ++ + +D +P A N
Sbjct: 555 RALEVSPDDAQIWNNLGLARFARNRLQEAEEALKEAVQRDPTYPLAHFN 603
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 105/287 (36%), Gaps = 40/287 (13%)
Query: 64 LVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQI 123
L + R+ P + H LG Y L + +A + Y +A L +AD A LL L +
Sbjct: 9 LKQIIRQNPGDPDPHCDLGDYYVELNRYEEAEAHYNQA----LGYDADCAEA-LLGLGIV 63
Query: 124 HHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQ 183
H Q PE+ + S++ DT + N LG + R +
Sbjct: 64 RHRQQRYPEAE------------------KYYRASLKLDTENSRTLNNLGSLYHDQERWE 105
Query: 184 SSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL 243
+ L +DP+ NLG+ + + D E + F+ + D + A N L
Sbjct: 106 EAEREYLKALEIDPDYALPHNNLGLLHARRQDFEGARAAFETAMRLDPEYDQAHYNLGNL 165
Query: 244 LLCKYGSVLA-------------GAGANTGEGACLDQASAVNVAKECLLAALKADPK--A 288
LA A + G A++ +L DPK A
Sbjct: 166 YFDHQKYALAEKAYKESLRLNPDSAFTHHELGNLYHHLGRYEEAEQEFQESLFLDPKLEA 225
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 335
AH+ +L N Y T + + KA ++ N + R+++A+ +
Sbjct: 226 AHV--SLGNLYVDTDRLNDAEDAINKALSIDSNSVDARHSLALIHFQ 270
>gi|388509246|gb|AFK42689.1| unknown [Lotus japonicus]
Length = 347
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 65/140 (46%)
Query: 97 SYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLK 156
++ ++L+R E D++ EL V+ A + G L ++ P + +L ++
Sbjct: 183 TFYVIRQVLVRRELDLSAKELQEQVRSGDASAIGLFELGAVMLRRKFYPAATKYLLQAIE 242
Query: 157 ESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 216
+ + A V N LG+ ++ G+L+ I+ + + + P NLG AY D
Sbjct: 243 KWDGENQDLAQVHNALGVSYVRDGKLEKGIAQFETAVKIQPGYVTAWNNLGDAYESKKDY 302
Query: 217 EQSAKCFQDLILKDQNHPAA 236
+ + K F++ +L D N+ A
Sbjct: 303 KSALKAFEEALLFDPNNQIA 322
>gi|380019749|ref|XP_003693765.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 2 [Apis florea]
Length = 1065
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ ++ + + P+ D NL A +GDMEQ+ + +
Sbjct: 111 YSNLGNVFKERGQLQEALENYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAY----- 165
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ Y L C + G L + ++ AK C L A++ P
Sbjct: 166 ------VTALQYNPDLYC----------VRSDLGNLLKALARLDEAKACYLKAIETRPDF 209
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 210 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFL 244
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 125/306 (40%), Gaps = 57/306 (18%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
AV W+ LG + G + +I +A+DPN D AY G++ + A+ F
Sbjct: 210 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLD-------AYINLGNVLKEARIFDR 262
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL-DQASAVNVAKECLLAALKA 284
+ AA + AL L +V+ G AC+ + +++A + A++
Sbjct: 263 AV-------AAYLR--ALNLSPNNAVV------HGNLACVYYEQGLIDLAIDTYRRAIEL 307
Query: 285 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA-VSR----IKDAER 339
P + NLANA G + C A +L P+ + +A + R I++A R
Sbjct: 308 QPNFPDAYCNLANALKEKGQVVEAEDCYNTALRLCPSHADSLNNLANIKREQGYIEEATR 367
Query: 340 ----SQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENE 395
+ E + + A + +AS+L++ + E + + +Q T A A+ N
Sbjct: 368 LYLKALEVFPEFAAAHSNLASVLQQQGKLN-EALMHYKEAIRIQPT---FADAYSNMGNT 423
Query: 396 LSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 455
L +M++ G A +C A++ +P A +NLA+ H+ SG
Sbjct: 424 LKEMQDIQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSG 462
Query: 456 KCLEKV 461
E +
Sbjct: 463 NIPEAI 468
>gi|289192263|ref|YP_003458204.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
gi|288938713|gb|ADC69468.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
Length = 310
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 117/282 (41%), Gaps = 52/282 (18%)
Query: 84 MYQRLGQPLKAVSSYEKAEEIL---LRCEADIARPE------LLSLVQIHHAQCLLPESS 134
Y R G+ LK++ Y++A E L L+ + D +R L+SL ++ ++ + +
Sbjct: 41 FYVRKGRLLKSLGRYDEALECLDKALKLKPDYSRAYFLKGVLLMSLGRLKESKEVFLKLL 100
Query: 135 GDNSLDKE--------------LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSG 180
LDK+ + E +E L L+ + + A+ W G IL G
Sbjct: 101 ---ELDKQESNIGAKCITATILMRLGEFDEALKILETMFEDYPKSAIAWAEKGEILYSEG 157
Query: 181 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 240
+L+ ++ L V+P + + G F+ G ++ +CF+ +I K++ AL+ Y
Sbjct: 158 KLKEALECFEKALEVNPKDYLSLLYKGEILFELGKFREALECFEKIIQKNEKDIRALL-Y 216
Query: 241 AALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 300
+L G + AKE + ALK +P ++ ++
Sbjct: 217 VIQILIFLGR--------------------ITEAKEYIEKALKLNPNSSLLYVYYGIVLN 256
Query: 301 LTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS-----RIKDA 337
G ++ + + +K ++ P + + AV+ +I+DA
Sbjct: 257 KLGKYKKALEWFDKVLEISPTNVYAWHGKAVALEKLGKIEDA 298
>gi|435852070|ref|YP_007313656.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica
DSM 15978]
gi|433662700|gb|AGB50126.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica
DSM 15978]
Length = 1078
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 102/256 (39%), Gaps = 44/256 (17%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P+N+ A G Y L + A SSY++A E L R DI + Q +
Sbjct: 778 PENSQAFSDRGDAYYALEKYPDAASSYDQALE-LDRGNVDIL-----------YKQSVAY 825
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
E G D+ + ++I+++ Q D++ A+ GL L + GR +++
Sbjct: 826 EKLG--QFDRAIG--SYDKIIAE-----QPDSKDAIYHK--GLALDRMGRYDDAVACYDQ 874
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 251
LL +DP++ +G +++ GD +Q+ F ++ D +A+ + G++
Sbjct: 875 LLELDPSDTLVMGTKAFSFYLRGDYQQALAGFDQVLAIDPTSVSAMYH--------KGTI 926
Query: 252 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 311
+ G D+ L+ DP W N Y L G +S C
Sbjct: 927 SYLVSSYKGSIYYYDK-------------TLELDPTCVTAWYNKGFIYNLIGQVETSISC 973
Query: 312 LEKAAKLEPNCMSTRY 327
+ A ++P+ S Y
Sbjct: 974 YDSALAIDPSSRSVLY 989
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 69/168 (41%), Gaps = 13/168 (7%)
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
G +L +G ++ ++++++DP N + G AY+ +A + + D+
Sbjct: 754 GRVLFSTGSYDQALQYANTVISIDPENSQAFSDRGDAYYALEKYPDAASSYDQALELDRG 813
Query: 233 HPAAL----INYAAL-----LLCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLL 279
+ L + Y L + Y ++A A +G LD+ + A C
Sbjct: 814 NVDILYKQSVAYEKLGQFDRAIGSYDKIIAEQPDSKDAIYHKGLALDRMGRYDDAVACYD 873
Query: 280 AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 327
L+ DP + A ++YL GD++ + ++ ++P +S Y
Sbjct: 874 QLLELDPSDTLVMGTKAFSFYLRGDYQQALAGFDQVLAIDPTSVSAMY 921
>gi|328777929|ref|XP_003249419.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Apis mellifera]
Length = 1065
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ ++ + + P+ D NL A +GDMEQ+ + +
Sbjct: 111 YSNLGNVFKERGQLQEALENYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAY----- 165
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ Y L C + G L + ++ AK C L A++ P
Sbjct: 166 ------VTALQYNPDLYC----------VRSDLGNLLKALARLDEAKACYLKAIETRPDF 209
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 210 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFL 244
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 125/306 (40%), Gaps = 57/306 (18%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
AV W+ LG + G + +I +A+DPN D AY G++ + A+ F
Sbjct: 210 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLD-------AYINLGNVLKEARIFDR 262
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL-DQASAVNVAKECLLAALKA 284
+ AA + AL L +V+ G AC+ + +++A + A++
Sbjct: 263 AV-------AAYLR--ALNLSPNNAVV------HGNLACVYYEQGLIDLAIDTYRRAIEL 307
Query: 285 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA-VSR----IKDAER 339
P + NLANA G + C A +L P+ + +A + R I++A R
Sbjct: 308 QPNFPDAYCNLANALKEKGQVVEAEDCYNTALRLCPSHADSLNNLANIKREQGYIEEATR 367
Query: 340 ----SQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENE 395
+ E + + A + +AS+L++ + E + + +Q T A A+ N
Sbjct: 368 LYLKALEVFPEFAAAHSNLASVLQQQGKLN-EALMHYKEAIRIQPT---FADAYSNMGNT 423
Query: 396 LSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 455
L +M++ G A +C A++ +P A +NLA+ H+ SG
Sbjct: 424 LKEMQDIQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSG 462
Query: 456 KCLEKV 461
E +
Sbjct: 463 NIPEAI 468
>gi|380019747|ref|XP_003693764.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 1 [Apis florea]
Length = 1095
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ ++ + + P+ D NL A +GDMEQ+ + +
Sbjct: 141 YSNLGNVFKERGQLQEALENYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAY----- 195
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ Y L C + G L + ++ AK C L A++ P
Sbjct: 196 ------VTALQYNPDLYC----------VRSDLGNLLKALARLDEAKACYLKAIETRPDF 239
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 240 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFL 274
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 125/306 (40%), Gaps = 57/306 (18%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
AV W+ LG + G + +I +A+DPN D AY G++ + A+ F
Sbjct: 240 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLD-------AYINLGNVLKEARIFDR 292
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL-DQASAVNVAKECLLAALKA 284
+ AA + AL L +V+ G AC+ + +++A + A++
Sbjct: 293 AV-------AAYLR--ALNLSPNNAVV------HGNLACVYYEQGLIDLAIDTYRRAIEL 337
Query: 285 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA-VSR----IKDAER 339
P + NLANA G + C A +L P+ + +A + R I++A R
Sbjct: 338 QPNFPDAYCNLANALKEKGQVVEAEDCYNTALRLCPSHADSLNNLANIKREQGYIEEATR 397
Query: 340 ----SQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENE 395
+ E + + A + +AS+L++ + E + + +Q T A A+ N
Sbjct: 398 LYLKALEVFPEFAAAHSNLASVLQQQGKLN-EALMHYKEAIRIQPT---FADAYSNMGNT 453
Query: 396 LSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 455
L +M++ G A +C A++ +P A +NLA+ H+ SG
Sbjct: 454 LKEMQDIQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSG 492
Query: 456 KCLEKV 461
E +
Sbjct: 493 NIPEAI 498
>gi|323447882|gb|EGB03789.1| putative O-linked GlcNAc transferase [Aureococcus anophagefferens]
Length = 971
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 75/178 (42%), Gaps = 13/178 (7%)
Query: 157 ESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 216
E+++ + A+ W+ L + G+L ++I+ + + P D NLG A + G++
Sbjct: 194 EAIRLNPAFAIAWSNLAGLFKDEGQLSTAIAYYREAIRLCPPFADVYSNLGSAMQEQGNL 253
Query: 217 EQSAKCFQDLILKDQNHPAALINYAALLLCKY---GSVLA----------GAGANTGEGA 263
++ +C+Q I + A N + LL + G+V A A G
Sbjct: 254 IEAKQCYQTAIRLRPDFAIAHGNLGSCLLTSHDAEGAVRALRHAIQLEPNFPDAYNNLGN 313
Query: 264 CLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
L + + A C AL+ P H ++NL A G R + C AA+L P+
Sbjct: 314 ALRSLAHMREAIACYRTALRLKPDHPHAYSNLGTAMRDRGLIREAIHCNVTAARLMPH 371
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 64/174 (36%), Gaps = 25/174 (14%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
A+ LG LL S + ++ L + ++PN D NLG A M ++ C++
Sbjct: 271 AIAHGNLGSCLLTSHDAEGAVRALRHAIQLEPNFPDAYNNLGNALRSLAHMREAIACYRT 330
Query: 226 LILKDQNHPAALINY-------------------AALLLCKYGSVLAGAGANTGEGACLD 266
+ +HP A N AA L+ + A G+ E LD
Sbjct: 331 ALRLKPDHPHAYSNLGTAMRDRGLIREAIHCNVTAARLMPHFAPAHANLGSLLREQGQLD 390
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
QA A A+ DP A + NL N Y + KC A K+ P
Sbjct: 391 QALA------HYHQAIALDPDFAEAYTNLGNTYRELCQFEDAIKCYTTALKIAP 438
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 118/329 (35%), Gaps = 39/329 (11%)
Query: 157 ESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 216
++++ R +N L + G++ +I L +DP D NLG G +
Sbjct: 126 KAIKYKPRFGDAYNNLATAHMHLGQVSDAIETYQMGLVIDPGLVDAHCNLGNLLKAQGKL 185
Query: 217 EQSAKCFQDLI----------------LKDQNHPAALINYA--ALLLC-KYGSVLAGAGA 257
E + +C+ + I KD+ + I Y A+ LC + V + G+
Sbjct: 186 EAARRCYLEAIRLNPAFAIAWSNLAGLFKDEGQLSTAIAYYREAIRLCPPFADVYSNLGS 245
Query: 258 NTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAK 317
E L + AK+C A++ P A NL + + D + + L A +
Sbjct: 246 AMQEQGNLIE------AKQCYQTAIRLRPDFAIAHGNLGSCLLTSHDAEGAVRALRHAIQ 299
Query: 318 LEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAA 377
LEPN + A + + +A RS E + R ++ + P A++
Sbjct: 300 LEPN-----FPDAYNNLGNALRSLAHMR-------EAIACYRTALRLKPDHPHAYSNLGT 347
Query: 378 VQKTHHEVAAAFETEENELSKMEECAGAGES--AFLDQASAVNVAKECLLAALKADPKAA 435
+ + A M A A + + L + ++ A A+ DP A
Sbjct: 348 AMRDRGLIREAIHCNVTAARLMPHFAPAHANLGSLLREQGQLDQALAHYHQAIALDPDFA 407
Query: 436 HIWANLANAYYLTGDHRSSGKCLEKVLMV 464
+ NL N Y + KC L +
Sbjct: 408 EAYTNLGNTYRELCQFEDAIKCYTTALKI 436
>gi|91203185|emb|CAJ72824.1| hypothetical protein kustd2079 [Candidatus Kuenenia
stuttgartiensis]
Length = 319
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 13/170 (7%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
+ EE E + LK++++ + V ++ LG+ KSG+ ++ VL + +DPN
Sbjct: 124 FDMEEYEPAIEYLKKTIEMNPDYKVAYSLLGISYAKSGKYDEAVKVLKKRIELDPNLAIT 183
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL---------LCKYGSVL- 252
NLG+ Y G +++ + + + H L N A L L Y +
Sbjct: 184 YSNLGLVYTMKGSNKEALVEYNKALGINPYHEETLFNIAFLYENMGQIDEALAYYNKTVE 243
Query: 253 ---AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 299
A A G + + A +L A+P + NL N Y
Sbjct: 244 CNSGNAKAQYNLGLNYLKKKQYDEAINAFEISLMANPDNIEAYNNLGNVY 293
>gi|374294026|ref|YP_005041049.1| hypothetical protein AZOLI_p30561 [Azospirillum lipoferum 4B]
gi|357427429|emb|CBS90373.1| conserved protein of unknown function (TPR domain protein)
[Azospirillum lipoferum 4B]
Length = 769
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 97/268 (36%), Gaps = 48/268 (17%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPEL---LSLVQIHHAQC 128
P +A LLG + R G+P A+ Y A ++ A P L +L + A
Sbjct: 108 PDDADVLCLLGAILGRQGRPAPALRCYRTAARLV----PGAAEPRLGMGRALEDLRQAGA 163
Query: 129 LLPESSGDNSLDKELEPEE----------------LEEILSKLKESMQSDTRQAVVWNTL 172
L G L + P++ L E S +E+++ A VW L
Sbjct: 164 AL----GCYRLAARMRPQDPAIRIALANALRRCGLLGEAASAYRETLRLGVDNASVWANL 219
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
G L GRL + + L P++ + NLG+ G + + F+ + D
Sbjct: 220 GATLQGLGRLSDAEAAYVQALRRQPDHAETRNNLGLLLHAQGRHADARQRFRAALALDPA 279
Query: 233 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 292
H AL+N L A A G ++A+ A+ D + A W
Sbjct: 280 HLPALVN------------LGLAEAALGR---------YDLAERWQRRAIARDGRQAEGW 318
Query: 293 ANLANAYYLTGDHRSSGKCLEKAAKLEP 320
NL NA G + C ++A L P
Sbjct: 319 NNLGNACKAQGRREEAEDCWKRALALNP 346
>gi|425453430|ref|ZP_18833188.1| Similar to tr|Q4BXF8|Q4BXF8_CROWT Glycosyl transferase [Microcystis
aeruginosa PCC 9807]
gi|389804272|emb|CCI16859.1| Similar to tr|Q4BXF8|Q4BXF8_CROWT Glycosyl transferase [Microcystis
aeruginosa PCC 9807]
Length = 403
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
E E+ E LS +++++ D A + LGL+L + RL SI L ++P+N
Sbjct: 289 EAEKYETALSVFEKTVEIDPSYADGYYNLGLVLKQLHRLPESIKAYKKALKLNPDNPTIY 348
Query: 204 GNLGIAYFQSGDMEQSAKCFQD--LILKDQ 231
NLG+AY G ++ + +Q +LKDQ
Sbjct: 349 QNLGVAYIVFGSYNEAIEIWQKGLQLLKDQ 378
>gi|110760723|ref|XP_623820.2| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Apis mellifera]
Length = 1095
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ ++ + + P+ D NL A +GDMEQ+ + +
Sbjct: 141 YSNLGNVFKERGQLQEALENYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAY----- 195
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ Y L C + G L + ++ AK C L A++ P
Sbjct: 196 ------VTALQYNPDLYC----------VRSDLGNLLKALARLDEAKACYLKAIETRPDF 239
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 240 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFL 274
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 125/306 (40%), Gaps = 57/306 (18%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
AV W+ LG + G + +I +A+DPN D AY G++ + A+ F
Sbjct: 240 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLD-------AYINLGNVLKEARIFDR 292
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL-DQASAVNVAKECLLAALKA 284
+ AA + AL L +V+ G AC+ + +++A + A++
Sbjct: 293 AV-------AAYLR--ALNLSPNNAVV------HGNLACVYYEQGLIDLAIDTYRRAIEL 337
Query: 285 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA-VSR----IKDAER 339
P + NLANA G + C A +L P+ + +A + R I++A R
Sbjct: 338 QPNFPDAYCNLANALKEKGQVVEAEDCYNTALRLCPSHADSLNNLANIKREQGYIEEATR 397
Query: 340 ----SQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENE 395
+ E + + A + +AS+L++ + E + + +Q T A A+ N
Sbjct: 398 LYLKALEVFPEFAAAHSNLASVLQQQGKLN-EALMHYKEAIRIQPT---FADAYSNMGNT 453
Query: 396 LSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 455
L +M++ G A +C A++ +P A +NLA+ H+ SG
Sbjct: 454 LKEMQDIQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSG 492
Query: 456 KCLEKV 461
E +
Sbjct: 493 NIPEAI 498
>gi|428221793|ref|YP_007105963.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Synechococcus sp. PCC 7502]
gi|427995133|gb|AFY73828.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Synechococcus sp. PCC 7502]
Length = 773
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 99/249 (39%), Gaps = 51/249 (20%)
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
L Y Q+GD+ ++ + ++ ++++ +H AN G
Sbjct: 8 LAFKYHQAGDLAEAERLYRQILIQQPHH---------------------IDANHLLGVLA 46
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
Q +VA + A+K +P+ + NL AY L+G + +KA KL+P+ T
Sbjct: 47 HQVGNYDVAIAYIETAIKLNPRNPDFYGNLGEAYRLSGKFTEAIASFQKALKLQPHNGKT 106
Query: 326 RYAVAVS---------RIKDAERSQEPTEQLSWAGNEMASILR-EGDPVQIEPPIAWAGF 375
Y + + I +R+ + L+ A + + +L+ +GD +
Sbjct: 107 HYNLGNALQAQGNLEQAISHYQRAIDLIPNLAQAHHNLGFLLKAQGDTTK--------AI 158
Query: 376 AAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAA 435
AA ++ A N L + A L ++ + A + + AL+ P++A
Sbjct: 159 AAYRQ-------ALAINPNYLQALHSLGNA-----LQESGLILEALDIYMKALELSPQSA 206
Query: 436 HIWANLANA 444
I+ +L NA
Sbjct: 207 EIYNDLGNA 215
>gi|284106837|ref|ZP_06386280.1| TPR repeat-containing protein [Candidatus Poribacteria sp. WGA-A3]
gi|283830016|gb|EFC34292.1| TPR repeat-containing protein [Candidatus Poribacteria sp. WGA-A3]
Length = 351
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 74/184 (40%), Gaps = 21/184 (11%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
++ ++ ++ LK++++ A + LGL+ L ++ +VL + + P D N
Sbjct: 81 QQPDQAVTHLKKAVELHPNFARAYFDLGLVYQHQKNLDAAATVLKKAIEIYPRFADAQLN 140
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
L AY Q GD EQ+ +Q + D + AL N A L
Sbjct: 141 LAFAYDQLGDREQAISAYQAALKMDPSQLTALFNLATL---------------------Y 179
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
D + A + L DP+ A W LA + + + + EKA + P+ +
Sbjct: 180 DMQGDTDQAMKELQTLTSQDPQDAKAWLLLAQLAEKSLSEKQAIEAYEKALGISPDLLEA 239
Query: 326 RYAV 329
YA+
Sbjct: 240 HYAL 243
>gi|91080933|ref|XP_974172.1| PREDICTED: similar to GA17918-PA [Tribolium castaneum]
Length = 947
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 70/176 (39%), Gaps = 39/176 (22%)
Query: 88 LGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEE 147
+G+ + +++AEE LR A+ LLP++ S + P
Sbjct: 511 VGRTYNHLKMFKEAEEAYLR------------------AKSLLPKAKPGESYQARIAPNH 552
Query: 148 LEEIL----------SKLKE---------SMQSDTRQAVVWNTLGLILLKSGRLQSSISV 188
L L ++L+E SM++D QA + G IL+K R + + V
Sbjct: 553 LNVFLNLANLISKNSTRLEEADMLYRQAISMRADYTQAYI--NRGDILIKLNRTKEAQEV 610
Query: 189 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
L D NN D NLG+ + + G Q+ + D H AL+N A LL
Sbjct: 611 YERALLYDSNNPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHEQALLNSAILL 666
>gi|425462685|ref|ZP_18842152.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
gi|389824244|emb|CCI26980.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
Length = 403
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
E E+ E LS +++++ D A + LGL+L + RL SI L ++P+N
Sbjct: 289 EAEKYETALSVFEKTVEIDPSYADGYYNLGLVLKQLHRLPESIKAYKKALKLNPDNPTIY 348
Query: 204 GNLGIAYFQSGDMEQSAKCFQD--LILKDQ 231
NLG+AY G ++ + +Q +LKDQ
Sbjct: 349 QNLGVAYIVFGSYNEAIEIWQKGLQLLKDQ 378
>gi|383784212|ref|YP_005468781.1| TPR-domaincontaining protein [Leptospirillum ferrooxidans C2-3]
gi|383083124|dbj|BAM06651.1| putative TPR-domaincontaining protein [Leptospirillum ferrooxidans
C2-3]
Length = 769
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 109/250 (43%), Gaps = 42/250 (16%)
Query: 67 VARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI----------LLRCEADIARPE 116
+ ++ P + +FLLG +Y+RL P A+ ++ KAE++ + E D+ R
Sbjct: 392 MIQRFPSSDMGYFLLGDLYRRLENPKAAIKNFLKAEKLAPSKWEIPFSISLAEMDLKR-- 449
Query: 117 LLSLVQ--IHHAQCLLPES-----SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVW 169
+ Q + A L P+S + D+ + L++ L+ S+ D + A
Sbjct: 450 -FPVAQKYLSKAMELRPDSAVLYFNRGVLFDQWNHKKYLKQSQRDLERSIALDPKMADAL 508
Query: 170 NTLGLI-LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
N LG ++ +G L ++ ++ L VDP N ++G YF+ G + ++ L
Sbjct: 509 NYLGYTWVVDNGNLIAARYLILRALTVDPKNGSFRDSIGWCYFRMGQIYKA--------L 560
Query: 229 KDQNHPAALINYAALLLCKYGSV-------LAGAGANTGEGACLDQASAV------NVAK 275
++++ L+ + A +L + L+G A + Q++A+ N +K
Sbjct: 561 REESTAYGLMPHDATVLAHLARIEMAVAKDLSGNSTTPRRQAIISQSAAMSSLSQKNFSK 620
Query: 276 ECLLAALKAD 285
E + LK D
Sbjct: 621 EFSIKRLKED 630
>gi|428218345|ref|YP_007102810.1| hypothetical protein Pse7367_2115 [Pseudanabaena sp. PCC 7367]
gi|427990127|gb|AFY70382.1| Tetratricopeptide TPR_2 repeat-containing protein [Pseudanabaena
sp. PCC 7367]
Length = 628
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 66/166 (39%), Gaps = 21/166 (12%)
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
LK+++ D N LG G L +I A++P + D + NLGIAY + G
Sbjct: 94 LKQAIHLDPNNFGYLNNLGNFYRAVGALDQAIDCYDRAAAINPQSADSLLNLGIAYTEQG 153
Query: 215 DMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 274
+Q+ + ++ + HP A LL K LD+A A
Sbjct: 154 KSDQAIVTLEKALILNPLHPRAQTMLGDLLQAK---------------GNLDRAIA---- 194
Query: 275 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
AL P + + A+L A++ GD ++ E A +EP
Sbjct: 195 --SYTKALALQPNSFNALASLGMAFFRKGDLENAQHAYENALAIEP 238
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 84/174 (48%), Gaps = 25/174 (14%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P++A + LG+ Y G+ +A+ + EKA ++L A+ L L+Q
Sbjct: 136 PQSADSLLNLGIAYTEQGKSDQAIVTLEKA--LILNPLHPRAQTMLGDLLQ--------- 184
Query: 132 ESSGDNSLDKELEPEELEEILSKLKE-SMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
+LD+ I S K ++Q ++ A+ +LG+ + G L+++
Sbjct: 185 ---AKGNLDR--------AIASYTKALALQPNSFNALA--SLGMAFFRKGDLENAQHAYE 231
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
+ LA++P + D + N+G +++ G+++ + C++++I P A IN A LL
Sbjct: 232 NALAIEPLSIDALTNIGATFYERGNIKMALACYREVINIVPRSPTAHINLAFLL 285
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 62/148 (41%), Gaps = 21/148 (14%)
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
GL L KSG L ++ + +SLLA P++ + G+ Q GD + + + + I D N
Sbjct: 44 GLALHKSGNLAAAKEIYASLLAKTPDHPRLLNYFGVLKGQMGDPKGAIELLKQAIHLDPN 103
Query: 233 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 292
+ L N G+ GA C D+A+A+N P++A
Sbjct: 104 NFGYLNN--------LGNFYRAVGALDQAIDCYDRAAAIN-------------PQSADSL 142
Query: 293 ANLANAYYLTGDHRSSGKCLEKAAKLEP 320
NL AY G + LEKA L P
Sbjct: 143 LNLGIAYTEQGKSDQAIVTLEKALILNP 170
>gi|270005381|gb|EFA01829.1| hypothetical protein TcasGA2_TC007431 [Tribolium castaneum]
Length = 921
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 70/176 (39%), Gaps = 39/176 (22%)
Query: 88 LGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEE 147
+G+ + +++AEE LR A+ LLP++ S + P
Sbjct: 485 VGRTYNHLKMFKEAEEAYLR------------------AKSLLPKAKPGESYQARIAPNH 526
Query: 148 LEEIL----------SKLKE---------SMQSDTRQAVVWNTLGLILLKSGRLQSSISV 188
L L ++L+E SM++D QA + G IL+K R + + V
Sbjct: 527 LNVFLNLANLISKNSTRLEEADMLYRQAISMRADYTQAYI--NRGDILIKLNRTKEAQEV 584
Query: 189 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
L D NN D NLG+ + + G Q+ + D H AL+N A LL
Sbjct: 585 YERALLYDSNNPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHEQALLNSAILL 640
>gi|383866051|ref|XP_003708485.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
[Megachile rotundata]
Length = 1094
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ ++ + + P+ D NL A +GDMEQ+ + +
Sbjct: 141 YSNLGNVFKERGQLQEALENYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAY----- 195
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ Y L C + G L + ++ AK C L A++ P
Sbjct: 196 ------VTALQYNPDLYC----------VRSDLGNLLKALARLDEAKACYLKAIETRPDF 239
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 240 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFL 274
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 125/306 (40%), Gaps = 57/306 (18%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
AV W+ LG + G + +I +A+DPN D AY G++ + A+ F
Sbjct: 240 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLD-------AYINLGNVLKEARIFDR 292
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL-DQASAVNVAKECLLAALKA 284
+ AA + AL L +V+ G AC+ + +++A + A++
Sbjct: 293 AV-------AAYLR--ALNLSPNNAVVH------GNLACVYYEQGLIDLAIDTYRRAIEL 337
Query: 285 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA-VSR----IKDAER 339
P + NLANA G + C A +L P+ + +A + R I++A R
Sbjct: 338 QPNFPDAYCNLANALKEKGQVVEAEDCYNTALRLCPSHADSLNNLANIKREQGYIEEATR 397
Query: 340 ----SQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENE 395
+ E + + A + +AS+L++ + E + + +Q T A A+ N
Sbjct: 398 LYLKALEVFPEFAAAHSNLASVLQQQGKLN-EALMHYKEAIRIQPT---FADAYSNMGNT 453
Query: 396 LSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 455
L +M++ G A +C A++ +P A +NLA+ H+ SG
Sbjct: 454 LKEMQDIQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSG 492
Query: 456 KCLEKV 461
E +
Sbjct: 493 NIPEAI 498
>gi|380012016|ref|XP_003690086.1| PREDICTED: transmembrane and TPR repeat-containing protein
CG4050-like [Apis florea]
Length = 997
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 90/226 (39%), Gaps = 38/226 (16%)
Query: 77 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC------EADIARPELLSLVQIHHAQCLL 130
AH +G Y L +A +Y KA+ +L + +A IA L V +
Sbjct: 483 AHINVGRTYNHLKMFKEAEDAYLKAKSLLPKAKPGESYQARIAPNHLNVFVNL------- 535
Query: 131 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
N + K E ++L + SM++D QA + G +L+K R + + V
Sbjct: 536 -----ANLIAKNATRLEEADLLYRQAISMRADYTQAYI--NRGDVLIKLNRTKEAQEVYE 588
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 250
L D NN D NLG+ + + G Q+ + D H AL+N +A+LL + G
Sbjct: 589 RALFYDSNNPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHEQALLN-SAILLQELG- 646
Query: 251 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 296
+A VA+E LL L+ D + NL
Sbjct: 647 ----------------RAELRKVARERLLKLLRKDSNNERVHFNLG 676
>gi|307152519|ref|YP_003887903.1| hypothetical protein Cyan7822_2660 [Cyanothece sp. PCC 7822]
gi|306982747|gb|ADN14628.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
Length = 543
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 116/275 (42%), Gaps = 38/275 (13%)
Query: 84 MYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGD-NSLDKE 142
+Y RLG+ L+ +++A ++ +A + P L + PE + D N L
Sbjct: 53 VYLRLGKALQKNQQFQEA--LIAYDKAFLINPRL----------NVEPELAKDLNRLGVA 100
Query: 143 LEPE-ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCD 201
L E +L + ++ + ++ D N LG LL Q + V + ++ DP N
Sbjct: 101 LSKENDLLDAITAYQRAVSVDPLLIEAQNNLGEALLSQEEWQEASQVFAQIIQFDPENAA 160
Query: 202 CIGNLGIAYFQSGDMEQSAKCFQD-LILKDQNHPAALINYAALLLCK----------YGS 250
NLG A+FQ Q+++ ++ L LK QN A +++ A L K Y
Sbjct: 161 AYTNLGNAFFQGEQWSQASEAYEKALELKPQN--ATILDRYAQALVKLERFQIAENIYLK 218
Query: 251 VLAGAGANTGE-----GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDH 305
+ A N G+ G L Q + A AL+ PK A I+ NL A + +
Sbjct: 219 AITLA-PNRGDLYNGLGEVLYQQQKIPEAIAAYQQALRLGPKKAVIYKNLCYARHTQRQY 277
Query: 306 RSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERS 340
+ K +A L+P+ ++ I++ ER+
Sbjct: 278 EEALKLCRQARALDPSEGGAKF-----YIQEVERT 307
>gi|196230691|ref|ZP_03129552.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
gi|196225032|gb|EDY19541.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
Length = 684
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 83/197 (42%), Gaps = 15/197 (7%)
Query: 140 DKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNN 199
D+ L L E + ++ + V + LGLI +++GRL + ++ L +D N
Sbjct: 12 DQHLYAGRLAEAEAIYRQILGVQPNHVGVLHNLGLIAVQTGRLAMAEELIRKALGLDAGN 71
Query: 200 CDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGA-N 258
+LG Y G +++ + +Q + +P A N L+L G + A A
Sbjct: 72 AIIHCSLGEVYRTQGRPQEAMESYQRALQLRPGYPEAASNL-GLVLADQGRLSEAAAACR 130
Query: 259 TGEGACLDQASAVNVAKECLLA-------------ALKADPKAAHIWANLANAYYLTGDH 305
+ + D A A N+ + L + AL P A W NL Y+ +G
Sbjct: 131 SALQSRPDFAPAHNILGKILGSSGDFAQAIASFQQALAIQPHFAEAWNNLGVTYHESGQA 190
Query: 306 RSSGKCLEKAAKLEPNC 322
+ + L++AA+L PN
Sbjct: 191 GPALEALQRAAQLNPNA 207
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 23/171 (13%)
Query: 74 NAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPES 133
NA H LG +Y+ G+P +A+ SY++A ++ RP PE+
Sbjct: 71 NAIIHCSLGEVYRTQGRPQEAMESYQRALQL---------RPGY-------------PEA 108
Query: 134 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLL 193
+ + L + L E + + ++QS A N LG IL SG +I+ L
Sbjct: 109 ASNLGLVLA-DQGRLSEAAAACRSALQSRPDFAPAHNILGKILGSSGDFAQAIASFQQAL 167
Query: 194 AVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
A+ P+ + NLG+ Y +SG + + Q + N P N LL
Sbjct: 168 AIQPHFAEAWNNLGVTYHESGQAGPALEALQRAAQLNPNAPEIHNNLGRLL 218
>gi|428297452|ref|YP_007135758.1| hypothetical protein Cal6303_0715 [Calothrix sp. PCC 6303]
gi|428233996|gb|AFY99785.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 6303]
Length = 222
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 76/189 (40%), Gaps = 14/189 (7%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
E ++++ E +Q + + + W G +L G Q +++ L V+P+ D +L
Sbjct: 7 EHSDVMTSDGEVLQVEVEEYLAWFNRGNLLDDLGLYQEAVAAYQQSLKVNPDYEDAWNSL 66
Query: 207 GIAYFQSGDM-EQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVLAGAG------- 256
G + +M E++ KCF + D A N +L L +Y +A
Sbjct: 67 GAVFCDQLEMYEEALKCFDQALRIDYLDNFAWYNRGNVLEHLGRYEDAIASYNLALKINS 126
Query: 257 ----ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 312
A G L + A ALK P+ W N A Y + G+ + + + L
Sbjct: 127 EDEMAWYSRGWALYEMGEFESAIASFNQALKIKPQDDSSWYNKACCYAVLGNVKKAVESL 186
Query: 313 EKAAKLEPN 321
KA KL PN
Sbjct: 187 RKAIKLSPN 195
>gi|422003049|ref|ZP_16350282.1| TPR repeat-containing protein [Leptospira santarosai serovar
Shermani str. LT 821]
gi|417258270|gb|EKT87662.1| TPR repeat-containing protein [Leptospira santarosai serovar
Shermani str. LT 821]
gi|456875527|gb|EMF90728.1| tetratricopeptide repeat protein [Leptospira santarosai str. ST188]
Length = 1197
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 78/169 (46%), Gaps = 23/169 (13%)
Query: 53 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 112
R+ ++ +TG + K P + ++H+ +G+++ + + + S++++ +LL +
Sbjct: 688 RKGEIDKAETGFKEILAKKPDSYYSHYQMGIIHLQRKKYEASADSFDRS--LLLNIDFVA 745
Query: 113 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 172
AR + + ++H S +K+L EE E +MQ D+ + +
Sbjct: 746 AR--IGKGISLYH------------SGNKKLAKEEFEI-------AMQQDSANELAPYNI 784
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 221
G+IL +I++ ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAITIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|397690319|ref|YP_006527573.1| TPR repeat-containing protein [Melioribacter roseus P3M]
gi|395811811|gb|AFN74560.1| TPR repeat-containing protein [Melioribacter roseus P3M]
Length = 470
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 83/215 (38%), Gaps = 41/215 (19%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
L EE E+ ++ + S+ + W G K+G+ + +++ L +DP++
Sbjct: 219 LRLEEFEKAINAFELSIALKDDFSSSWFNCGYAYYKTGKYKQAMTAYKKALKIDPDDETI 278
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 262
NLG Y + G + + KC+ + I D ++ Y + LA G
Sbjct: 279 YYNLGQTYEEMGSIANAIKCYTEAINLDPDY--------------YEAYLARGNCYDASG 324
Query: 263 ----ACLDQASAVNVAKECLLA-----------------------ALKADPKAAHIWANL 295
A D A+ +A E + A A++ DP + W L
Sbjct: 325 KFQLALRDFNKAITIASEPVDAWYAKADLEYSLGKLNESIESYKNAVEIDPDNFNGWLKL 384
Query: 296 ANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
A A++ G+ S K ++ +++ N Y++A
Sbjct: 385 AEAFFEVGNWLESLKAYKECIRIDKNYARAYYSIA 419
>gi|66524297|ref|XP_393964.2| PREDICTED: transmembrane and TPR repeat-containing protein
CG4050-like isoform 1 [Apis mellifera]
Length = 996
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 90/226 (39%), Gaps = 38/226 (16%)
Query: 77 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC------EADIARPELLSLVQIHHAQCLL 130
AH +G Y L +A +Y KA+ +L + +A IA L V +
Sbjct: 483 AHINVGRTYNHLKMFKEAEDAYLKAKSLLPKAKPGESYQARIAPNHLNVFVNL------- 535
Query: 131 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
N + K E ++L + SM++D QA + G +L+K R + + V
Sbjct: 536 -----ANLIAKNATRLEEADLLYRQAISMRADYTQAYI--NRGDVLIKLNRTKEAQEVYE 588
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 250
L D NN D NLG+ + + G Q+ + D H AL+N +A+LL + G
Sbjct: 589 RALFYDSNNPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHEQALLN-SAILLQELG- 646
Query: 251 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 296
+A VA+E LL L+ D + NL
Sbjct: 647 ----------------RAELRKVARERLLKLLRKDSNNERVHFNLG 676
>gi|91776987|ref|YP_546743.1| tetratricopeptide TPR_2 [Methylobacillus flagellatus KT]
gi|91710974|gb|ABE50902.1| Tetratricopeptide TPR_2 [Methylobacillus flagellatus KT]
Length = 552
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E LSK S+++ Q W +G + L++ + Q + + +L +DP N + I L IA
Sbjct: 27 EALSKYTASLEAGNGQIQTWLRIGNLFLRTMKYQQAAETMEFVLGMDPQNIEAIYGLAIA 86
Query: 210 YFQSGDMEQS 219
YF G E++
Sbjct: 87 YFYLGRHEEA 96
>gi|421112475|ref|ZP_15572932.1| tetratricopeptide repeat protein [Leptospira santarosai str. JET]
gi|410802120|gb|EKS08281.1| tetratricopeptide repeat protein [Leptospira santarosai str. JET]
Length = 1197
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 78/169 (46%), Gaps = 23/169 (13%)
Query: 53 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 112
R+ ++ +TG + K P + ++H+ +G+++ + + + S++++ +LL +
Sbjct: 688 RKGEIDKAETGFKEILAKKPDSYYSHYQMGIIHLQRKKYEASADSFDRS--LLLNIDFVA 745
Query: 113 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 172
AR + + ++H S +K+L EE E +MQ D+ + +
Sbjct: 746 AR--IGKGISLYH------------SGNKKLAKEEFEI-------AMQQDSANELAPYNI 784
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 221
G+IL +I++ ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAITIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|425435522|ref|ZP_18815972.1| Similar to tr|Q96301|Q96301 [Microcystis aeruginosa PCC 9432]
gi|389679929|emb|CCH91334.1| Similar to tr|Q96301|Q96301 [Microcystis aeruginosa PCC 9432]
Length = 1254
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 78/213 (36%), Gaps = 23/213 (10%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
+E E+ ++ S+Q D V+ +L + + + L + P+N + N
Sbjct: 1063 KETEKAIACYSHSVQLDATNVEVYKSLAQLYDRQENYAKAEKYYRCALLLQPHNLELRYN 1122
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
LG+ ++ +++ CFQ +I Q P I Y L G
Sbjct: 1123 LGVVLYEQEKFDKAVSCFQKII---QAKPQDAIAYLHL------------------GISY 1161
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP--NCM 323
Q + AK C A+ DP A + NL Y D + + C + + +P
Sbjct: 1162 KQQKLLTKAKSCFEKAIDLDPDYAMAYYNLGVVYSCQPDEKKAVDCFRQCLRCDPANKLA 1221
Query: 324 STRYAVAVSRIKDAERSQEPTEQLSWAGNEMAS 356
T A+S IK+ + W N++ +
Sbjct: 1222 HTALLFALSGIKEVSSEEIYDASSRWYRNKIQT 1254
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 90/222 (40%), Gaps = 48/222 (21%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL-SLVQIHHAQCLL 130
P A + LGL+Y++L + KA++ Y + ++ D E+ SL Q++ Q
Sbjct: 1046 PDYPTAFYNLGLVYEQLKETEKAIACYSHSVQL------DATNVEVYKSLAQLYDRQENY 1099
Query: 131 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
++ L+P LE + +N LG++L + + ++S
Sbjct: 1100 AKAEKYYRCALLLQPHNLE-----------------LRYN-LGVVLYEQEKFDKAVSCFQ 1141
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 250
++ P + +LGI+Y Q + ++ CF+ I D ++ A N + C+
Sbjct: 1142 KIIQAKPQDAIAYLHLGISYKQQKLLTKAKSCFEKAIDLDPDYAMAYYNLGVVYSCQ--- 1198
Query: 251 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADP--KAAH 290
D+ AV+ ++C L+ DP K AH
Sbjct: 1199 --------------PDEKKAVDCFRQC----LRCDPANKLAH 1222
>gi|359690312|ref|ZP_09260313.1| TPR-repeat-containing protein [Leptospira licerasiae serovar
Varillal str. MMD0835]
Length = 690
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 22/186 (11%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTL--GLILLKSGRLQSSISVLSSLLAVDPNNCDCIG 204
+LEE + L+ + Q+ + ++ ++ G L G + SI+ L L +PNN D +
Sbjct: 327 KLEESVKYLELANQAGSNDPELFRSIAEGFEQLNQG--EQSINALQKGLKYNPNNLDLLF 384
Query: 205 NLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGAC 264
L Y+ GD+ + + ++ ++ + P ALL G
Sbjct: 385 QLAETYYNKGDLLAAEETYRRIV---DSTPGDSFTETALLNL---------------GVV 426
Query: 265 LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS 324
LDQ A L L +PK A + NL Y TG+ + + KA+ L+P+ +
Sbjct: 427 LDQMERYGEAITYLNRVLDLNPKNAKAYYNLGLVYKHTGNGTQAIENFRKASYLDPDDIK 486
Query: 325 TRYAVA 330
+ A+
Sbjct: 487 PKEALG 492
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 22/138 (15%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
EE ++ +S D+ LG++L + R +I+ L+ +L ++P N NLG+
Sbjct: 400 EETYRRIVDSTPGDSFTETALLNLGVVLDQMERYGEAITYLNRVLDLNPKNAKAYYNLGL 459
Query: 209 AYFQSGDMEQSAKCFQ-----------------DLILKDQNHPAALINYAALLLCK--YG 249
Y +G+ Q+ + F+ D L+++ + A+ Y+AL K Y
Sbjct: 460 VYKHTGNGTQAIENFRKASYLDPDDIKPKEALGDYYLENKFYREAIEEYSALFKQKEDYY 519
Query: 250 SV---LAGAGANTGEGAC 264
V LA A TGE +
Sbjct: 520 KVALKLAEAYMGTGESSS 537
>gi|257093693|ref|YP_003167334.1| type IV pilus biogenesis/stability protein PilW [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257046217|gb|ACV35405.1| type IV pilus biogenesis/stability protein PilW [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 267
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 80/202 (39%), Gaps = 18/202 (8%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E+ S+ + +A + LG + L+SG L ++ L + +DP+ G +
Sbjct: 33 DEVDSRRPTPPRDARTRAKLHTELGSLYLQSGNLAVALQELLIAIDIDPDYGKAYGTRAL 92
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAG------------ 256
A+F ++E + + FQ + D+N P NY LC+ G G
Sbjct: 93 AHFGIRELELADRDFQRALSIDRNDPDISNNY-GWFLCQIGRGKEGITYLQRALKDPLYE 151
Query: 257 ----ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 312
A G C ++ A+ + +L+ P LAN YY GD + + + L
Sbjct: 152 TPERAYLNAGGCYATLGDLDRAETFVQQSLRLAPGNPQAELQLANIYYRRGDLQLANEQL 211
Query: 313 EK-AAKLEPNCMSTRYAVAVSR 333
K EPN + V V R
Sbjct: 212 ASLVRKTEPNAEALWLMVRVER 233
>gi|425452866|ref|ZP_18832681.1| Similar to tr|Q4BXF8|Q4BXF8_CROWT Glycosyl transferase [Microcystis
aeruginosa PCC 7941]
gi|389765193|emb|CCI08881.1| Similar to tr|Q4BXF8|Q4BXF8_CROWT Glycosyl transferase [Microcystis
aeruginosa PCC 7941]
Length = 403
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
E E+ E LS +++++ D A + LGL+L + RL SI L ++P+N
Sbjct: 289 EAEKYEAALSVFEKTVEIDPSYADGYYNLGLVLKQLHRLPESIKAYKKALKLNPDNPTIY 348
Query: 204 GNLGIAYFQSGDMEQSAKCFQD--LILKDQ 231
NLG+AY G ++ + +Q +LKDQ
Sbjct: 349 QNLGVAYIVFGSYNEAIEIWQKGLQLLKDQ 378
>gi|254412549|ref|ZP_05026323.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196180859|gb|EDX75849.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 884
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 127/343 (37%), Gaps = 26/343 (7%)
Query: 12 GKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSR---EEKVSSLKTGLVHVA 68
G + KLG+ I+S D AL+F D G++ EE ++S L
Sbjct: 431 GIALRKLGRLEEAIAS-FDKALQFKPDKHEAWYNRGSALDELGRIEEAIASFDKALQF-- 487
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKA---EEILLRCEADIARPELLSLVQIHH 125
P A + G+ +LG+ +A++SY++A I LR + E ++
Sbjct: 488 --KPDYHQAWYNRGIALDKLGRIEEAIASYDQAWYNRGIALRKLGQL--EEAITCFDKAL 543
Query: 126 AQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSS 185
L + N + + LEE ++ +++Q WN G+ L K G+L+ +
Sbjct: 544 QFKLDDHQAWYNRGNALFDLGRLEEGIASFDKALQFKRDCHQAWNNRGIALKKLGQLEEA 603
Query: 186 ISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL- 244
I+ L P+ N G A F G +E++ + + + P A + L
Sbjct: 604 IASYDKALQFKPDLHQAWNNRGNALFNLGQLEEAIASYDKALQFKPDDPEAWYSRGIALG 663
Query: 245 --------LCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 292
+ Y L A G L + A AL+ W
Sbjct: 664 NLGQLEEAIASYDKALQFKPDDPEAWYSRGIALGNLGQLEEAIASYDNALQFKSDDPEAW 723
Query: 293 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 335
N NA G + + +KA +++P+ RY ++R K
Sbjct: 724 YNRGNALDGLGQLKEAIASYDKALQIKPDYHQARYNRGIARRK 766
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 122/320 (38%), Gaps = 40/320 (12%)
Query: 12 GKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLKTGLVHVARKM 71
G +++LG+ I+S + AL+F D G S S K+ L + + +
Sbjct: 295 GYAMDELGEIEEAIAS-FEQALQFKRDCHQAWKNRGNSQS----KLGRLFKAIASYDKAL 349
Query: 72 ---PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 128
P A + G+ ++LG+ +A++SY+ A + +PE +
Sbjct: 350 QFKPDYHQAWYNRGIALRKLGRLEEAIASYDNALQF---------KPE--------QHEV 392
Query: 129 LLPESSGDNSLDKELEPEELEEILSKLKESMQ--SDTRQAVVWNTLGLILLKSGRLQSSI 186
L S L + LEE ++ +++Q D QA G+ L K GRL+ +I
Sbjct: 393 WLDRSIALRKLGR------LEEAIASYDKALQFEPDDHQACY--NRGIALRKLGRLEEAI 444
Query: 187 SVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLC 246
+ L P+ + N G A + G +E++ F + ++ A N + L
Sbjct: 445 ASFDKALQFKPDKHEAWYNRGSALDELGRIEEAIASFDKALQFKPDYHQAWYN-RGIALD 503
Query: 247 KYGSVLAGAG----ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLT 302
K G + A G L + + A C AL+ W N NA +
Sbjct: 504 KLGRIEEAIASYDQAWYNRGIALRKLGQLEEAITCFDKALQFKLDDHQAWYNRGNALFDL 563
Query: 303 GDHRSSGKCLEKAAKLEPNC 322
G +KA + + +C
Sbjct: 564 GRLEEGIASFDKALQFKRDC 583
>gi|410449277|ref|ZP_11303336.1| tetratricopeptide repeat protein [Leptospira sp. Fiocruz LV3954]
gi|418745196|ref|ZP_13301537.1| tetratricopeptide repeat protein [Leptospira santarosai str.
CBC379]
gi|418753445|ref|ZP_13309691.1| tetratricopeptide repeat protein [Leptospira santarosai str.
MOR084]
gi|409966199|gb|EKO34050.1| tetratricopeptide repeat protein [Leptospira santarosai str.
MOR084]
gi|410016936|gb|EKO79009.1| tetratricopeptide repeat protein [Leptospira sp. Fiocruz LV3954]
gi|410793988|gb|EKR91902.1| tetratricopeptide repeat protein [Leptospira santarosai str.
CBC379]
Length = 1197
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/169 (19%), Positives = 78/169 (46%), Gaps = 23/169 (13%)
Query: 53 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 112
R+ ++ +TG + K P + ++H+ +G+++ + + + S++++ +LL +
Sbjct: 688 RKGEIDKAETGFKEILAKKPDSYYSHYQMGIIHLQRKKYEASADSFDRS--LLLNIDFVA 745
Query: 113 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 172
AR + + ++H SG+ L KE + + +MQ D+ + +
Sbjct: 746 AR--IGKGISLYH--------SGNKKLAKE-----------EFEIAMQQDSANELAPYNI 784
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 221
G+IL +I++ ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAITIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|326433006|gb|EGD78576.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818]
Length = 828
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 71/180 (39%), Gaps = 22/180 (12%)
Query: 78 HFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDN 137
H LG+ +R G KA+ Y+KA L ++ + + + H+ L GD
Sbjct: 318 HNNLGIACRRKGAYDKAIQHYKKA----LAIRVEVLGEKHPTTAETHNNLGELHRHKGDY 373
Query: 138 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAV-- 195
E E + L + D+ + + LG+ L G +I + LA+
Sbjct: 374 DSAIECYSRANEVFVETLGDK---DSNTGMTYGNLGIAYLSKGEYDKAIEFIEKALAIMV 430
Query: 196 ------DPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI------LKDQNHPAALINYAAL 243
PN +GNLGIAY + GD +++ F+ + D+ HPA Y L
Sbjct: 431 EILGDKHPNTAMTLGNLGIAYLEKGDHDKATDQFEKALAIYLEAFGDK-HPATADTYTNL 489
>gi|322787461|gb|EFZ13549.1| hypothetical protein SINV_08719 [Solenopsis invicta]
Length = 847
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 90/225 (40%), Gaps = 38/225 (16%)
Query: 77 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC------EADIARPELLSLVQIHHAQCLL 130
AH +G Y L +A +Y KA+ +L + +A IA L V +
Sbjct: 346 AHINVGRTYNHLKMFKEAEDAYLKAKSLLPKAKPGESYQARIAPNHLNVFVNLA------ 399
Query: 131 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
N + K E ++L + SM++D QA + G +L+K R + + V
Sbjct: 400 ------NLIAKNATRLEEADLLYRQAISMRADYTQAYI--NRGDVLIKLNRTKEAQEVYE 451
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 250
L D NN D NLG+ + + G Q+ + D H AL+N +A+LL + G
Sbjct: 452 RALFYDSNNPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHEQALLN-SAILLQELG- 509
Query: 251 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 295
+A VA+E LL L+ D + NL
Sbjct: 510 ----------------RAELRKVARERLLKLLRKDSNNERVHFNL 538
>gi|186684446|ref|YP_001867642.1| hypothetical protein Npun_R4324 [Nostoc punctiforme PCC 73102]
gi|186466898|gb|ACC82699.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
Length = 763
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 83/208 (39%), Gaps = 14/208 (6%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
LEE ++ +++ + WN G+ L++ GRL+ +I+ L P++ N G
Sbjct: 551 LEEAIASYDQALNFKPDKDNAWNNRGIALVELGRLEEAIASYDQALNFKPDDHQAWYNRG 610
Query: 208 IAYFQSGDMEQSAKCF-QDLILKDQNHPAALINYAALL-LCKYGSVLAGAG--------- 256
IA F G +E++ F Q L K H A AL+ L + +A
Sbjct: 611 IALFNLGRLEEAIASFDQALNFKPDYHEAWYNRGTALVELGRLEEAIASFDQAIKIKSDD 670
Query: 257 --ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 314
A G L + + A ALK P + W N A Y L G+ + + L++
Sbjct: 671 HQAWNNWGYALVKLERLEEAIASFDEALKIKPDKDNAWYNKACCYGLLGNVDLAIENLQQ 730
Query: 315 AAKLEPNCMST-RYAVAVSRIKDAERSQ 341
+ L P T + I+ +R Q
Sbjct: 731 SINLNPKYRETAKTDTDFDNIRQDQRFQ 758
>gi|26338035|dbj|BAC32703.1| unnamed protein product [Mus musculus]
Length = 604
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 134/336 (39%), Gaps = 50/336 (14%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E+ EE + LKES++ A +++L +L + R + + + + + P++ D N
Sbjct: 284 EKTEEAIMLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDIYQAGIKNCPDSSDLHNN 343
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
+ SG E++ +Q I +H A++N G + G N+
Sbjct: 344 YAVFLVDSGFPEKAVAHYQQAIQLSPSHHVAVVNL--------GRLYRSLGENSK----- 390
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
A+E ALK + A + + L YY TG H+ + + +A L+P+
Sbjct: 391 --------AEEWYRRALKV-ARTAEVLSPLGALYYNTGRHKEALEVYREAVSLQPSQREL 441
Query: 326 RYAVA-----VSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQK 380
R A+A + + K+AE+ + S + +P +E + +A+
Sbjct: 442 RLALAQVLAVMGQTKEAEK--------------ITSHIVSEEPRCLE---CYRLLSAIHS 484
Query: 381 THHEVAAAFETEENELS-KMEECAGAGESAF-----LDQASAVNVAKECLLAALKADPKA 434
A E E L K ++ E F L + + ++ A E AA+ DP
Sbjct: 485 KQEHHGKALEAIEKALQLKPKDPKVISELFFTKGNQLREQNLLDKAFESYEAAVTLDPDQ 544
Query: 435 AHIWANLANAYYLTGDHRSSGKCLEKVLMVYCSSNL 470
A W N+ ++ G + S+ E+ L + S L
Sbjct: 545 AQAWMNMGGIRHIQGSYVSARAYYERALKLVPDSKL 580
>gi|440756140|ref|ZP_20935341.1| glycosyl transferase 2 family protein [Microcystis aeruginosa
TAIHU98]
gi|440173362|gb|ELP52820.1| glycosyl transferase 2 family protein [Microcystis aeruginosa
TAIHU98]
Length = 403
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
E E+ E LS +++++ D A + LGL+L + RL SI L ++P+N
Sbjct: 289 EAEKYEAALSVFEKTVEIDPSYADGYYNLGLVLKQLHRLPESIKAYKKALKLNPDNPTIY 348
Query: 204 GNLGIAYFQSGDMEQSAKCFQD--LILKDQ 231
NLG+AY G ++ + +Q +LKDQ
Sbjct: 349 QNLGVAYIVFGSYNEAIEIWQKGLQLLKDQ 378
>gi|78213860|ref|YP_382639.1| hypothetical protein Syncc9605_2352 [Synechococcus sp. CC9605]
gi|78198319|gb|ABB36084.1| hypothetical protein Syncc9605_2352 [Synechococcus sp. CC9605]
Length = 400
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 22/134 (16%)
Query: 91 PLKAVSSYEKAEEILLRCEADI-ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELE 149
P++AVS Y +A EI L + AR L + + +E LE
Sbjct: 253 PVQAVSCYRQALEIPLDTRVSLGARLNLAA---------------------RLMEQGNLE 291
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E +S + + Q A+ W LGL+ + G L +++ LA+DPNN +C N +A
Sbjct: 292 EAISLTQTAAQRAPEVALAWYNLGLMQRRRGDLAAALEAYGRALALDPNNAECHQNNAVA 351
Query: 210 YFQSGDMEQSAKCF 223
G+++ + F
Sbjct: 352 QLLGGNIDAARSSF 365
>gi|359684210|ref|ZP_09254211.1| TPR repeat-containing protein [Leptospira santarosai str.
2000030832]
Length = 1197
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 78/169 (46%), Gaps = 23/169 (13%)
Query: 53 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 112
R+ ++ +TG + K P + ++H+ +G+++ + + + S++++ +LL +
Sbjct: 688 RKGEIDKAETGFKEILAKKPDSYYSHYQMGIIHLQRKKYEASADSFDRS--LLLNIDFVA 745
Query: 113 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 172
AR + + ++H S +K+L EE E +MQ D+ + +
Sbjct: 746 AR--IGKGISLYH------------SGNKKLAKEEFEI-------AMQQDSANELAPYNI 784
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 221
G+IL +I++ ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAITIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|350424769|ref|XP_003493906.1| PREDICTED: transmembrane and TPR repeat-containing protein
CG4050-like [Bombus impatiens]
Length = 1007
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 90/225 (40%), Gaps = 38/225 (16%)
Query: 77 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLR------CEADIARPELLSLVQIHHAQCLL 130
AH +G Y L +A +Y KA+ +L + +A IA L V +
Sbjct: 483 AHINVGRTYNHLKMFKEAEDAYLKAKSLLPKPKPGESYQARIAPNHLNVFVNL------- 535
Query: 131 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
N + K E ++L + SM++D QA + G IL+K R + + V
Sbjct: 536 -----ANLIAKNATRLEEADLLYRQAISMRADYTQAYI--NRGDILIKLNRTKEAQEVYE 588
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 250
L D NN D NLG+ + + G Q+ + D H AL+N +A+LL + G
Sbjct: 589 RALFYDSNNPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHEQALLN-SAILLQELG- 646
Query: 251 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 295
+A VA+E LL L+ D + NL
Sbjct: 647 ----------------RAELRKVARERLLKLLRKDSNNERVHFNL 675
>gi|189218643|ref|YP_001939284.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
gi|189185501|gb|ACD82686.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
Length = 294
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 26/159 (16%)
Query: 68 ARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQ 127
+R+ P+ A HF LGL Y+ LG+ KA Y+KA LR + D + A
Sbjct: 101 SREFPQEAAPHFFLGLAYESLGRYRKATGEYKKA----LRLKEDFPK-----------AW 145
Query: 128 CLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSIS 187
C L S L + + + K +++ A W+ LG ++ G +S+I+
Sbjct: 146 CNL--GSCYVYLKR------YSKAIEAFKRAIEEYPSFARAWSNLGGCYIELGDYRSAIN 197
Query: 188 VLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDL 226
L +++ P+ + NLG AY G++++ K L
Sbjct: 198 ALEKAISLRPDLPEAWCNLGSAY---GEIKEYKKAIDSL 233
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 262 GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
G+C + A E A++ P A W+NL Y GD+RS+ LEKA L P+
Sbjct: 149 GSCYVYLKRYSKAIEAFKRAIEEYPSFARAWSNLGGCYIELGDYRSAINALEKAISLRPD 208
>gi|115378507|ref|ZP_01465664.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
gi|310819976|ref|YP_003952334.1| hypothetical protein STAUR_2709 [Stigmatella aurantiaca DW4/3-1]
gi|115364476|gb|EAU63554.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
gi|309393048|gb|ADO70507.1| tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
Length = 1369
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 41/79 (51%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E L E +++ KE+++ D A + LG L++ ++ +I S LA DP +G
Sbjct: 1200 ERLPEAIAEWKETIKRDPNHADTYEQLGKAYLETNKMDEAIPAFESALAADPKRKRVLGA 1259
Query: 206 LGIAYFQSGDMEQSAKCFQ 224
+G +F G +++ + ++
Sbjct: 1260 IGDVFFSEGRWDEAIRRYE 1278
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 39/82 (47%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
+ ++K +++ +A LG+I + RL +I+ + DPN+ D LG AY
Sbjct: 1172 IDQMKSAVEKAPHRADYHYALGVIYRDAERLPEAIAEWKETIKRDPNHADTYEQLGKAYL 1231
Query: 212 QSGDMEQSAKCFQDLILKDQNH 233
++ M+++ F+ + D
Sbjct: 1232 ETNKMDEAIPAFESALAADPKR 1253
>gi|340725051|ref|XP_003400888.1| PREDICTED: transmembrane and TPR repeat-containing protein
CG4050-like [Bombus terrestris]
Length = 1007
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 90/226 (39%), Gaps = 38/226 (16%)
Query: 77 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLR------CEADIARPELLSLVQIHHAQCLL 130
AH +G Y L +A +Y KA+ +L + +A IA L V +
Sbjct: 483 AHINVGRTYNHLKMFKEAEDAYLKAKSLLPKPKPGESYQARIAPNHLNVFVNL------- 535
Query: 131 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
N + K E ++L + SM++D QA + G IL+K R + + V
Sbjct: 536 -----ANLIAKNATRLEEADLLYRQAISMRADYTQAYI--NRGDILIKLNRTKEAQEVYE 588
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 250
L D NN D NLG+ + + G Q+ + D H AL+N +A+LL + G
Sbjct: 589 RALFYDSNNPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHEQALLN-SAILLQELG- 646
Query: 251 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 296
+A VA+E LL L+ D + NL
Sbjct: 647 ----------------RAELRKVARERLLKLLRKDSNNERVHFNLG 676
>gi|322432943|ref|YP_004210192.1| hypothetical protein AciX9_4094 [Granulicella tundricola MP5ACTX9]
gi|321165170|gb|ADW70874.1| Tetratricopeptide TPR_1 repeat-containing protein [Granulicella
tundricola MP5ACTX9]
Length = 663
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 81/207 (39%), Gaps = 33/207 (15%)
Query: 180 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 239
G+ Q +I+ ++L + P++ + LG + G+ +++ + + I ++P AL N
Sbjct: 184 GQTQQAINSFENVLLLKPDDAETFNYLGTLFHLLGETDKAKESYLLAIKHKPDYPLALCN 243
Query: 240 YAALLLCKYGS------VLAGA--------GANTGEGACLDQASAVNVAKECLLAALKAD 285
ALL+ +G +L A A G+ L Q A E L L+ D
Sbjct: 244 LGALLM-DFGQWQVAEMMLRKAIELDPDLLAAYCNLGSVLAQQGNTVAAIEALRQVLQRD 302
Query: 286 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV-------------- 331
P A L N GD + KC A K P TR+ ++
Sbjct: 303 PAHAEALCTLGNTMNNLGDEAGAMKCFHLALKANPGHALTRFNMSTLTLAAGNFAEGWPD 362
Query: 332 ----SRIKDAERSQEPTEQLSWAGNEM 354
+++++ R++ Q W G ++
Sbjct: 363 YELRWQVRESSRNERHLTQPRWTGEDL 389
>gi|427722160|ref|YP_007069437.1| glycosyl transferase family protein [Leptolyngbya sp. PCC 7376]
gi|427353880|gb|AFY36603.1| glycosyl transferase family 9 [Leptolyngbya sp. PCC 7376]
Length = 2322
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 158 SMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDME 217
+++ + R A N LG LL + + +I+ +LA+DPN D ++G+ + GD +
Sbjct: 162 ALKLEPRNANFHNNLGHALLGLDQYEQAIATFKKVLAIDPNRLDAKIHVGMVLHEKGDYK 221
Query: 218 QSAKCFQDLILKDQNHPAALINYAALLLCKYG 249
+ + ++ ++ HP L NYA +L +YG
Sbjct: 222 DAIQHYKKILETHPRHPGLLNNYAN-VLKEYG 252
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 36/189 (19%), Positives = 75/189 (39%), Gaps = 27/189 (14%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
+++++ + + N LG +L + + +++V L + P+ NLG Y +
Sbjct: 644 RQALKQEPHNIDLLNKLGTVLQNNQQFSEAVAVFEEALELRPDATALYFNLGNTYLLDSN 703
Query: 216 MEQSAKCFQ---DLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVN 272
+++ ++ ++ KD+ +L G G A T
Sbjct: 704 YQEAIATYETGLEINPKDRG-----------ILNNLGHSYLGINAYTE------------ 740
Query: 273 VAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 332
A+ A L P+ A W +L NAY + + KA +L P+ + +Y +A +
Sbjct: 741 -ARSAFRAILDFAPEDAEAWNHLGNAYQAEQNFDEAIAHFRKAIQLSPDTIDFKYNLANA 799
Query: 333 RIKDAERSQ 341
+D E ++
Sbjct: 800 LQQDKEITE 808
>gi|393765846|ref|ZP_10354406.1| tetratricopeptide tpr 2 repeat protein [Methylobacterium sp. GXF4]
gi|392728738|gb|EIZ86043.1| tetratricopeptide tpr 2 repeat protein [Methylobacterium sp. GXF4]
Length = 618
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 70/172 (40%), Gaps = 22/172 (12%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E L L ++ Q+ + A + N LG++L GR + L L +DP + NLG+A
Sbjct: 31 EALPLLNKAAQTTPQDAEIHNNLGVVLNTLGRPAEAAVALERSLELDPLSASTHNNLGVA 90
Query: 210 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 269
Y + ++ CF+ + H A +N L A LD
Sbjct: 91 YRALRRLPEAVACFEH--SRALKHDAGTVNNLGL-------------------AYLDLER 129
Query: 270 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
N A C A+ DP +A +LA A GD + + L+ AA L+P
Sbjct: 130 VEN-ATRCFREAIALDPASAQAHLHLAFALRKAGDLLGALESLDAAANLDPG 180
>gi|307168705|gb|EFN61737.1| Transmembrane and TPR repeat-containing protein CG4050 [Camponotus
floridanus]
Length = 980
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 90/225 (40%), Gaps = 38/225 (16%)
Query: 77 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC------EADIARPELLSLVQIHHAQCLL 130
AH +G Y L +A +Y KA+ +L + +A IA L V +
Sbjct: 478 AHINVGRTYNHLKMFKEAEDAYLKAKSLLPKAKPGESYQARIAPNHLNVFVNL------- 530
Query: 131 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
N + K E ++L + SM++D QA + G +L+K R + + V
Sbjct: 531 -----ANLIAKNATRLEEADLLYRQAISMRADYTQAYI--NRGDVLIKLNRTKEAQEVYE 583
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 250
L D NN D NLG+ + + G Q+ + D H AL+N +A+LL + G
Sbjct: 584 RALFYDSNNPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHEQALLN-SAILLQELG- 641
Query: 251 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 295
+A VA+E LL L+ D + NL
Sbjct: 642 ----------------RAELRKVARERLLKLLRKDSNNERVHFNL 670
>gi|168054571|ref|XP_001779704.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668902|gb|EDQ55500.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 922
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 21/176 (11%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
+ + ++K +E+++ + + A + + L + G + +I S + + PN CD N
Sbjct: 46 HDFDMCIAKNEEAIRIEPQFAECYGNMANALKEKGNIDLAIQYYSVAIELKPNFCDAWSN 105
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
L AY + G ++++A+C Q AL L L A +N G L
Sbjct: 106 LASAYMRKGRLQEAAECCQH----------------ALTL---NPRLVDAHSNLGN--LL 144
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
+ A C + A++ P A W+NLA G+ + + ++A +L+PN
Sbjct: 145 KAQGLTHHAYLCYVEAIRLQPTFAIAWSNLAGLLMEAGELQKALAYYKEAIRLKPN 200
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 69/172 (40%), Gaps = 21/172 (12%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E +S S+Q A+ + L + + G L +I L +D + + NLG
Sbjct: 219 QEAISCYNRSIQLRPDYAIAYGNLASVYYEQGLLDYAILYYKQALLLDSSFIEAYNNLGN 278
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
A +G +E+S C+++ + NHP AL N + + +
Sbjct: 279 ALKDAGRVEESISCYENCLQLQNNHPQALTNLGNIYM---------------------EW 317
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
+ ++ A A L + ++NLA Y G++ + C + +++P
Sbjct: 318 NMISTAATFYKATLSVTTGLSAPYSNLATIYKQQGNYADAIACYNEVMRVDP 369
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 107/264 (40%), Gaps = 36/264 (13%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ------ 122
R P A AH LG + + +G+ +A+S Y ++ I LR + IA L S+
Sbjct: 196 RLKPNFADAHLNLGNVLKAIGRHQEAISCYNRS--IQLRPDYAIAYGNLASVYYEQGLLD 253
Query: 123 ---IHHAQCLLPESS---GDNSLDKEL-EPEELEEILSKLKESMQSDTRQAVVWNTLGLI 175
+++ Q LL +SS N+L L + +EE +S + +Q LG I
Sbjct: 254 YAILYYKQALLLDSSFIEAYNNLGNALKDAGRVEESISCYENCLQLQNNHPQALTNLGNI 313
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
++ + ++ + + L+V NL Y Q G+ + C+ +++ D
Sbjct: 314 YMEWNMISTAATFYKATLSVTTGLSAPYSNLATIYKQQGNYADAIACYNEVMRVDPMAAD 373
Query: 236 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 295
L+N G L + V+ A + + A+ P A ANL
Sbjct: 374 GLVN---------------------RGNTLKEIGRVSEAIQDYIRAVAIRPTMAEAHANL 412
Query: 296 ANAYYLTGDHRSSGKCLEKAAKLE 319
A+AY +G ++ K ++A L
Sbjct: 413 ASAYKDSGHVEAAIKSYKQALFLR 436
>gi|392954380|ref|ZP_10319931.1| hypothetical protein WQQ_40030 [Hydrocarboniphaga effusa AP103]
gi|391857037|gb|EIT67568.1| hypothetical protein WQQ_40030 [Hydrocarboniphaga effusa AP103]
Length = 232
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%)
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
LG+I KS RLQ + S + +P N LGI Y +SG+ + + ++ +
Sbjct: 102 LGIIYAKSNRLQIATSAFNKAATSNPQNAAAFNWLGIVYRESGNYPMAQQAYEKALAVKP 161
Query: 232 NHPAALINYAALL 244
N+PA +N LL
Sbjct: 162 NYPAVHLNLGILL 174
>gi|378763101|ref|YP_005191717.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase 110
kDa subunit O-linked N-acetylglucosamine transferase 110
kDa subunit; O-GlcNAc transferase subunit p110
[Sinorhizobium fredii HH103]
gi|365182729|emb|CCE99578.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase 110
kDa subunit O-linked N-acetylglucosamine transferase 110
kDa subunit; O-GlcNAc transferase subunit p110
[Sinorhizobium fredii HH103]
Length = 1209
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 21/175 (12%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+L+ L+ L +++++ + WN LGL+ G +++ + +A+DP + NL
Sbjct: 423 DLDGALADLNKALKTAPGSSTTWNFLGLVQGARGDNRAAEAAFKEAIALDPLDPVAHANL 482
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
I Y M ++ + + D + AL+ G
Sbjct: 483 AIQYMDEMRMAEARREIDTALSVDPSFDVALV---------------------ARGRYHL 521
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
Q V+ A E LLA A+P ++ LA A+Y GD + L+ A +L+PN
Sbjct: 522 QNGEVDKAVEDLLAGSTANPAYSNAQLLLAAAHYEKGDRIPGAQALDNADRLDPN 576
>gi|338536124|ref|YP_004669458.1| hypothetical protein LILAB_32495 [Myxococcus fulvus HW-1]
gi|337262220|gb|AEI68380.1| TPR repeat-containing protein [Myxococcus fulvus HW-1]
Length = 271
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 14/165 (8%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P +AHAH L +Y +A+S Y A + L E+ A L + H + +
Sbjct: 42 PSSAHAHDNLATVYAEKKLFREALSEYLTA--LKLEPESATAHYNLACFLSTHAGEMAVE 99
Query: 132 ESSGDNSLDKELEPEEL------------EEILSKLKESMQSDTRQAVVWNTLGLILLKS 179
E LD E L EE + +L+ +++ D++ A + L +++
Sbjct: 100 EYKEAIELDPEYPDAHLNLGLTYADQGRVEEAMRELQTAIELDSQDAFPRHELAALMMDE 159
Query: 180 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 224
G +S+I+ L ++ ++P+N + +LGI Y Q G ++ + ++
Sbjct: 160 GDYRSAITQLKEVVRLEPDNFEAQLDLGICYAQKGFYAEAERAYE 204
>gi|417781814|ref|ZP_12429550.1| tetratricopeptide repeat protein [Leptospira weilii str.
2006001853]
gi|410778000|gb|EKR62642.1| tetratricopeptide repeat protein [Leptospira weilii str.
2006001853]
Length = 1197
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/169 (18%), Positives = 78/169 (46%), Gaps = 23/169 (13%)
Query: 53 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 112
R+ ++ + G + K P + ++H+ +G+++ + + ++ S++++ +LL +
Sbjct: 688 RKGEIDKAEAGFKEILAKKPDSYYSHYQMGIIHLQRKEYEASIDSFDRS--LLLNIDFVA 745
Query: 113 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 172
AR + + ++H SG+ L KE + + +MQ D+ + +
Sbjct: 746 AR--IGKGISMYH--------SGNKKLAKE-----------EFETAMQQDSANELAPYNI 784
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 221
G+IL +I++ ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAIAIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|158335983|ref|YP_001517157.1| TPR repeat-containing serine/threonine protein kinase
[Acaryochloris marina MBIC11017]
gi|158306224|gb|ABW27841.1| serine/threonine kinase with TPR repeats [Acaryochloris marina
MBIC11017]
Length = 810
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 23/191 (12%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
+S E++ D + A +N G ++ G+ +++I+ + + PN NLG +F
Sbjct: 429 ISDYNEALTLDPKDAETYNHRGDAQVELGKYEAAIADYRKAIRLQPNQAQGYLNLGSVFF 488
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLA---GAGANTGEGACLDQA 268
G +E + K I + NH +A +N + Y SVL GA + + L
Sbjct: 489 VQGKLEAAVKELDKAIQAESNHLSAHVNRGS-----YRSVLGDPEGAEQDWEKALKLPVR 543
Query: 269 SAVNVA-----------KECLLA----ALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
+A + A K+ +A AL +P+ NL +Y G+ + + +
Sbjct: 544 TAKDYASRGYAKSRLDRKQDAIADYNQALTINPQLTRAHTNLGGVFYEQGEIEQARQSFD 603
Query: 314 KAAKLEPNCMS 324
+A ++ PN S
Sbjct: 604 QALQINPNSTS 614
>gi|110597820|ref|ZP_01386103.1| TPR repeat:Tetratricopeptide TPR_3 [Chlorobium ferrooxidans DSM
13031]
gi|110340545|gb|EAT59028.1| TPR repeat:Tetratricopeptide TPR_3 [Chlorobium ferrooxidans DSM
13031]
Length = 592
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 88/219 (40%), Gaps = 15/219 (6%)
Query: 117 LLSLVQIHHAQCLLPESSGD--NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGL 174
++ L H AQ E + + N ++ E+E ++ +L + + + W LG
Sbjct: 252 IIDLPNRHAAQTKTNELATEWVNKVNAEVEQQDWISLLDICQRWSTAQPQNCSSWRYLGY 311
Query: 175 ILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP 234
+++G L +I + ++P N +LG AY ++G + + +Q + D +
Sbjct: 312 AYIQNGELSKAIPAYQEAVRINPANAHYWSDLGAAYGRAGQQTKKIEAYQQAVSLDPDLE 371
Query: 235 AALINYAALL---------LCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAA 281
+ IN L Y L AG+ T G + + E A
Sbjct: 372 NSWINLGIAYNENGNSEKSLNAYQQALRISPDNAGSWTQLGIIYGRIGRQDKQIESFQKA 431
Query: 282 LKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
++ + ++ W NL +AY TG + + ++A ++ P
Sbjct: 432 VRINSDYSNAWLNLGSAYQKTGQFAKAIEAFKQALRINP 470
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 23/148 (15%)
Query: 197 PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAG 256
P NC LG AY Q+G++ ++ +Q+ A IN A Y S L A
Sbjct: 300 PQNCSSWRYLGYAYIQNGELSKAIPAYQE---------AVRINPAN---AHYWSDLGAAY 347
Query: 257 ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAA 316
G+ Q + E A+ DP + W NL AY G+ S ++A
Sbjct: 348 GRAGQ-----QTKKI----EAYQQAVSLDPDLENSWINLGIAYNENGNSEKSLNAYQQAL 398
Query: 317 KLEPNCMS--TRYAVAVSRIKDAERSQE 342
++ P+ T+ + RI ++ E
Sbjct: 399 RISPDNAGSWTQLGIIYGRIGRQDKQIE 426
>gi|383863362|ref|XP_003707150.1| PREDICTED: transmembrane and TPR repeat-containing protein
CG4050-like [Megachile rotundata]
Length = 1007
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 90/226 (39%), Gaps = 38/226 (16%)
Query: 77 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLR------CEADIARPELLSLVQIHHAQCLL 130
AH +G Y L +A +Y KA+ +L + +A IA L V +
Sbjct: 483 AHINVGRTYNHLKMFKEAEDAYLKAKSLLPKPKPGESYQARIAPNHLNVFVNL------- 535
Query: 131 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
N + K E ++L + SM++D QA + G +L+K R + + V
Sbjct: 536 -----ANLIAKNATRLEEADLLYRQAISMRADYTQAYI--NRGDVLIKLNRTKEAQEVYE 588
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 250
L D NN D NLG+ + + G Q+ + D H AL+N +A+LL + G
Sbjct: 589 RALFYDSNNPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHEQALLN-SAILLQELG- 646
Query: 251 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 296
+A VA+E LL L+ D + NL
Sbjct: 647 ----------------RAELRKVARERLLKLLRKDSNNERVHFNLG 676
>gi|376296674|ref|YP_005167904.1| response regulator receiver [Desulfovibrio desulfuricans ND132]
gi|323459236|gb|EGB15101.1| response regulator receiver [Desulfovibrio desulfuricans ND132]
Length = 444
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 144 EPEELEEILSKLKESMQS--DTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCD 201
+P E+ L+K+ E+ S D ++N LG+ L G+ + +I +S L + P +
Sbjct: 300 DPGMSEKYLTKVLEAKGSRLDKEDIALFNKLGIALRGQGKWREAIDNYASALRISPEDEG 359
Query: 202 CIGNLGIAYFQSGDMEQSAKCFQ 224
N+G+AY+ GD ++ +CFQ
Sbjct: 360 LHYNMGMAYYDGGDKRRAGQCFQ 382
>gi|456888365|gb|EMF99348.1| tetratricopeptide repeat protein [Leptospira borgpetersenii str.
200701203]
Length = 689
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/169 (17%), Positives = 75/169 (44%), Gaps = 23/169 (13%)
Query: 53 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 112
R+ ++ ++G + K P + ++H+ +G+++ + + ++ S++++ L D
Sbjct: 180 RKGEIDKAESGFKEILAKKPDSYYSHYQMGIIHLQRKKYEASIDSFDRS----LLLNTDF 235
Query: 113 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 172
+ + ++H SG+ L KE + + +MQ D+ + +
Sbjct: 236 VAARIGKGISMYH--------SGNKKLAKE-----------EFETAMQQDSANELAPYNI 276
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 221
G+IL +I++ ++ +P D + Y++ GD+EQ+ K
Sbjct: 277 GIILFNDNLYNEAIAIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 325
>gi|383774716|ref|YP_005453785.1| hypothetical protein S23_64920 [Bradyrhizobium sp. S23321]
gi|381362843|dbj|BAL79673.1| hypothetical protein S23_64920 [Bradyrhizobium sp. S23321]
Length = 461
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 16/209 (7%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+L + L ++++ D + A + G++ RL +++ + + P++ +
Sbjct: 122 DLNRAAADLSKAIELDPQDAESYELRGVVYTNQRRLDRALADYDQAIKLKPDDAQAWSDR 181
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G+ Y+ GD E++ + + + D N P + N A K G L A A+ GE LD
Sbjct: 182 GVTYYLGGDNEKAVRDLSEALRLDPNRPRSYTNRGA-AYKKLGQ-LDKAVADDGEAIRLD 239
Query: 267 QASAVNVAKECL-LAALKADPKA-------------AHIWANLANAYYLTGDHRSSGKCL 312
L LAA+ KA + + N ++Y+L G+ ++
Sbjct: 240 PKVPEYYDNRGLSLAAMGEYDKAIADYDQALRLAPRPNFFTNRGDSYHLKGELGAALSDY 299
Query: 313 EKAAKLEPNCMSTRYAVAVSRIKDAERSQ 341
E A KL+PN T AV K ER +
Sbjct: 300 ESALKLDPNFAQTYNNRAVLYKKMGERRK 328
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 81/221 (36%), Gaps = 15/221 (6%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
L+ L+ ++++ A W+ G+ G + ++ LS L +DPN N
Sbjct: 155 RRLDRALADYDQAIKLKPDDAQAWSDRGVTYYLGGDNEKAVRDLSEALRLDPNRPRSYTN 214
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVLAG--------- 254
G AY + G ++++ + I D P N L + +Y +A
Sbjct: 215 RGAAYKKLGQLDKAVADDGEAIRLDPKVPEYYDNRGLSLAAMGEYDKAIADYDQALRLAP 274
Query: 255 -AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
T G + A +ALK DP A + N A Y G+ R + E
Sbjct: 275 RPNFFTNRGDSYHLKGELGAALSDYESALKLDPNFAQTYNNRAVLYKKMGERRKALADYE 334
Query: 314 KAAKLEP---NCMSTRYAVAVSRIKDAERSQEPTEQLSWAG 351
A +L+P N + R A+ K P +S +G
Sbjct: 335 TALRLDPGNDNAANGRRAMIAEIAKFGAEPLRPLNAVSGSG 375
>gi|307730646|ref|YP_003907870.1| hypothetical protein [Burkholderia sp. CCGE1003]
gi|307585181|gb|ADN58579.1| Tetratricopeptide TPR_1 repeat-containing protein [Burkholderia sp.
CCGE1003]
Length = 627
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 71/174 (40%), Gaps = 21/174 (12%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
EE ++ + +++ A N +G+ L GR +I + LA +P NL
Sbjct: 166 EEAIASFRRTLELRPGHAGALNNMGMSLNALGRADEAIPCFKAALAAEPRFVAAHFNLAN 225
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
+ +G EQ+ F+ + N P A+ G+ LA G + L+++
Sbjct: 226 TFDATGRHEQAVASFEATLALQPNLPPAIFGI--------GNALAALGRHAQAIPYLERS 277
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
+ DP+ A W +L A+ G H ++ + ++A +L+P+
Sbjct: 278 VGL-------------DPQFALAWLSLGTAHQALGAHATAVRAFDQALRLQPDL 318
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 73/177 (41%), Gaps = 25/177 (14%)
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ-DLILKD 230
LG L G++ +I + L + P+ NLG AY +G E +A F+ L L+
Sbjct: 87 LGNALKALGQIDEAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFRRSLRLQP 146
Query: 231 QN----------------HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 274
++ H A+ ++ L + G AGA G L+ + A
Sbjct: 147 EDASSHNNLGNALHALGRHEEAIASFRRTLELRPGH----AGALNNMGMSLNALGRADEA 202
Query: 275 KECLLAALKADPK--AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAV 329
C AAL A+P+ AAH NLAN + TG H + E L+PN + +
Sbjct: 203 IPCFKAALAAEPRFVAAHF--NLANTFDATGRHEQAVASFEATLALQPNLPPAIFGI 257
>gi|149918347|ref|ZP_01906838.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1]
gi|149820873|gb|EDM80282.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1]
Length = 478
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 80/200 (40%), Gaps = 29/200 (14%)
Query: 161 SDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSA 220
S ++ +N +G L++G+ + S D N NLG+ Y GD + +
Sbjct: 178 SPEEKSQAYNLMGFAYLQAGKRVDAFRSFKSAAETDDKNASAWNNLGVQYMWRGDPKTAE 237
Query: 221 KCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLA 280
CF +YAA L K+ A A+ GA L + A+ +
Sbjct: 238 SCF---------------SYAAELDPKF------AEAHLNHGASLRANGKLTEAELAFNS 276
Query: 281 ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST--RYAVAVSRIKDA- 337
A K P A + NL YL D + ++ AKLE C+ RY V + K +
Sbjct: 277 AAKLRPDWAEVQFNLG-VLYLDADQIGT---FDEIAKLE-ACIKAFERYKSLVGQGKSSL 331
Query: 338 ERSQEPTEQLSWAGNEMASI 357
ERS + + GNE+ S+
Sbjct: 332 ERSTKQSGPTDAMGNELVSV 351
>gi|116749303|ref|YP_845990.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB]
gi|116698367|gb|ABK17555.1| Tetratricopeptide TPR_2 repeat protein [Syntrophobacter
fumaroxidans MPOB]
Length = 686
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 80/180 (44%), Gaps = 21/180 (11%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+EE +E+++ R + N LGL+L + G+ + + + LA+ P+ + NL
Sbjct: 486 RVEEAEKHYREAVRLQPRASNFRNNLGLVLGRQGKTEEAEAEYREALAIRPDYANAHNNL 545
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G+ Q G E++ +++ + AA Y++ A+ G CL
Sbjct: 546 GVLLAQKGKTEEAIAHYREAL-------AARPGYSS--------------AHNNWGYCLM 584
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
A V A +AAL+ P A+I ANL A+ + + E+A +L P+ ++ R
Sbjct: 585 MADRVEEAIPHFIAALRLKPDDANIHANLGTAFVKQRNPDRAVMHFEEAIRLAPSNINVR 644
>gi|118365491|ref|XP_001015966.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89297733|gb|EAR95721.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 3373
Score = 46.6 bits (109), Expect = 0.025, Method: Composition-based stats.
Identities = 44/168 (26%), Positives = 70/168 (41%), Gaps = 21/168 (12%)
Query: 68 ARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLR-CEADIARPELLSLVQIHHA 126
++ KN +A F Y G + + Y K+ E L + CE P A
Sbjct: 182 SKSESKNVNAEFK---AYFHRGNCYRQIKEYNKSIEDLQKACEIKKDNPP---------A 229
Query: 127 QCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSI 186
Q L S +N L E+ L+K + ++ D +A +N L L G+L S+
Sbjct: 230 QNNLGLSYFENQL--------YEQALAKFQNAIDLDDSKATYYNNKALALYHLGQLDFSL 281
Query: 187 SVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP 234
+V + + VDPN+ + N G Y G +Q+ + F I N+P
Sbjct: 282 TVYNKAIEVDPNDARTLYNRGNTYLALGQNKQAHEDFDSAIRLSPNNP 329
>gi|219850611|ref|YP_002465044.1| TPR repeat-containing serine/threonine protein kinase [Chloroflexus
aggregans DSM 9485]
gi|219544870|gb|ACL26608.1| serine/threonine protein kinase with TPR repeats [Chloroflexus
aggregans DSM 9485]
Length = 863
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
+E++ + A +N LG ILL R +I LS L +D N + LG AYF S
Sbjct: 740 REALNRNDYDAFAYNGLGWILLYQDRYDEAIEALSQALRLDNQNAEIFNGLGWAYFYSNR 799
Query: 216 MEQSAKCFQDLI 227
++ FQ I
Sbjct: 800 YSEATTFFQQAI 811
>gi|395492794|ref|ZP_10424373.1| sulfotransferase [Sphingomonas sp. PAMC 26617]
Length = 707
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 25/180 (13%)
Query: 66 HVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLS-LVQIH 124
HV P + A L+GLM G A+ +A C+A LS L ++
Sbjct: 28 HVLALWPGQSDALHLMGLMAHAYGNLDIAIDHLRRA------CQAPRVHATYLSNLAEMC 81
Query: 125 HAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQS 184
+ LLPE+ + + D WN LG+IL +SG+L+
Sbjct: 82 RQKGLLPEAE------------------DAARRGVTMDPAMVAGWNNLGIILQESGKLEE 123
Query: 185 SISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
S+S L +LA+ P+ + NLG + G ++Q+ ++ + + A+ N + LL
Sbjct: 124 SLSCLERVLALQPDYPEAHNNLGNTLKRLGRLKQARGQYEAALRLSPAYAEAMSNLSNLL 183
>gi|118349087|ref|XP_001033420.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89287769|gb|EAR85757.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 537
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 107/274 (39%), Gaps = 49/274 (17%)
Query: 72 PKNAHAHFLLGLMY---QRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHH--- 125
P ++ AHF LGL Y QRL KA SY + +I R L ++ H
Sbjct: 23 PFDSQAHFQLGLYYLLSQRLE---KAKQSYIEGLKINPRFSQGHNN---LGVIYQHMNMQ 76
Query: 126 ---AQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRL 182
QC L NSL E+ P++ + +++ +G I + +L
Sbjct: 77 EEALQCFL------NSL--EINPQDYQALMN------------------IGNIYSEKNQL 110
Query: 183 QSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAA 242
+ + + L ++P N DC NLG Y Q +++ + + L D + L+NY
Sbjct: 111 EEAKQWMIKSLNINPKNKDCHLNLGTIYIQMKKYKEAEQSY--LRALDLDAQDFLVNYK- 167
Query: 243 LLLCKYGSVL----AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANA 298
L C Y VL + A G Q + K+ L L+ DPK + L N
Sbjct: 168 -LGCLYSEVLLINPSDIEAYFNLGQFYSQMNMFKEEKQSYLKILQIDPKYFQAYEKLGNL 226
Query: 299 YYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 332
Y+ + + K+ L P + + + ++
Sbjct: 227 YFNMNMLEDAKQNYLKSIDLNPQSAISYFNLGIT 260
>gi|425434973|ref|ZP_18815436.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
gi|389675386|emb|CCH95506.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
Length = 403
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
E E+ E LS +++++ D A + LGL+L + RL SI L ++P+N
Sbjct: 289 EAEKYEAALSVFEKTVEIDPSYADGYYNLGLVLKQLHRLPESIKAYKKALKLNPDNPTIY 348
Query: 204 GNLGIAYFQSGDMEQSAKCFQD--LILKDQ 231
NLG+AY G ++ + +Q +LKDQ
Sbjct: 349 QNLGVAYIVFGSYNEAIEIWQKGLQLLKDQ 378
>gi|406981036|gb|EKE02561.1| hypothetical protein ACD_20C00362G0010 [uncultured bacterium]
Length = 630
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 114/272 (41%), Gaps = 44/272 (16%)
Query: 70 KMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCL 129
K P+ ++LL L +++ G +A+ +Y KA EI R + L+L +++ Q
Sbjct: 137 KYPQLDDCYYLLALNHEKTGNIPQAIENYRKAIEINSR-----SHKSYLALGILYYNQKQ 191
Query: 130 LPESSGD--NSLDKELE--------------PEELEEILSKLKESMQSDTRQAVVWNTLG 173
L E++ + N+L + E E+ +++ K + + + +N LG
Sbjct: 192 LDEANKELQNALSIDFNNTKIHFYLGLIYNAQENFEKAIAEFKYVVTFEPKNIEAYNNLG 251
Query: 174 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNH 233
L G L+ +I + +A++P+N + LG YF + + + Q I +H
Sbjct: 252 LAYGFLGWLEEAIQEFKTAIALNPDNPEVRYALGYIYFMKKNYQYAQIELQTAIRLKPDH 311
Query: 234 PAALINYAALLLCKYGSVLAGAGANTGEGACLDQ-ASAVNVAKECLLAALKADPKAAHIW 292
+ L+L G V A LD+ A++ E ALK +P +
Sbjct: 312 ELSY-----LIL---GQVYAH----------LDRFKEAIDEYNE----ALKLNPNNPTTY 349
Query: 293 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS 324
NLA A G + +C +K +L P +S
Sbjct: 350 YNLAFALNTLGMSEKATECYKKVIELNPAYLS 381
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 156/394 (39%), Gaps = 70/394 (17%)
Query: 66 HVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPEL-LSLVQIH 124
+V PKN A+ LGL Y LG +A+ ++ A I L + PE+ +L I+
Sbjct: 235 YVVTFEPKNIEAYNNLGLAYGFLGWLEEAIQEFKTA--IALNPD----NPEVRYALGYIY 288
Query: 125 HAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQS 184
+ K + ++E L+ +++ + + LG + R +
Sbjct: 289 F-------------MKKNYQYAQIE-----LQTAIRLKPDHELSYLILGQVYAHLDRFKE 330
Query: 185 SISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
+I + L ++PNN NL A G E++ +C++ +I + +PA L Y L
Sbjct: 331 AIDEYNEALKLNPNNPTTYYNLAFALNTLGMSEKATECYKKVI---ELNPAYLSAYLDL- 386
Query: 245 LCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGD 304
G++L G + AKEC AA+ + +L Y + +
Sbjct: 387 ----GNILLSNGQQ-------------DFAKECFEAAINRSSNFGEAYYSLGLCYIRSEE 429
Query: 305 HRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDA--ERSQEPTEQLSWAGNEMASILRE-G 361
++ + C + A + PN Y + KD E + E EQ E A+ + G
Sbjct: 430 YQKALYCFDHAIAINPNLSDAYYQKGLIYKKDGNMELAIENIEQAIKLDTENAASYNDLG 489
Query: 362 DPVQI----EPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAV 417
QI E I +A +K A+F +N L + G + F +
Sbjct: 490 LAYQILGNQEKAI-----SAFKK------ASFLDPDNSLYR----HNLGIALFEGKRYKE 534
Query: 418 NVAKECLLAALKADPKAAHIWANLANAYYLTGDH 451
++ + L A++ P A I+ NLAN Y GD+
Sbjct: 535 SIVE--LRRAIRLSPYNADIYFNLANIYEKIGDY 566
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 67/171 (39%), Gaps = 25/171 (14%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDME----------- 217
+ +LGL ++S Q ++ +A++PN D G+ Y + G+ME
Sbjct: 417 YYSLGLCYIRSEEYQKALYCFDHAIAINPNLSDAYYQKGLIYKKDGNMELAIENIEQAIK 476
Query: 218 ---QSAKCFQDL-----ILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 269
++A + DL IL +Q + A+ L G EG + S
Sbjct: 477 LDTENAASYNDLGLAYQILGNQEKAISAFKKASFLDPDNSLYRHNLGIALFEGKRYKE-S 535
Query: 270 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
V + + A++ P A I+ NLAN Y GD+ + E K P
Sbjct: 536 IVELRR-----AIRLSPYNADIYFNLANIYEKIGDYADAVDSYENFVKHNP 581
>gi|359729137|ref|ZP_09267833.1| TPR repeat-containing protein [Leptospira weilii str. 2006001855]
Length = 1092
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/169 (18%), Positives = 78/169 (46%), Gaps = 23/169 (13%)
Query: 53 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 112
R+ ++ + G + K P + ++H+ +G+++ + + ++ S++++ +LL +
Sbjct: 688 RKGEIDKAEAGFKEILAKKPDSYYSHYQMGIIHLQRKEYEASIDSFDRS--LLLNIDFVA 745
Query: 113 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 172
AR + + ++H SG+ L KE + + +MQ D+ + +
Sbjct: 746 AR--IGKGISMYH--------SGNKKLAKE-----------EFETAMQQDSANELAPYNI 784
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 221
G+IL +I++ ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAIAIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|116075659|ref|ZP_01472918.1| TPR repeat [Synechococcus sp. RS9916]
gi|116066974|gb|EAU72729.1| TPR repeat [Synechococcus sp. RS9916]
Length = 734
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 79/201 (39%), Gaps = 15/201 (7%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
E++ L+ +++ LGL L + G L ++I+ + L + PN + NLG
Sbjct: 81 FSELIKLLRRTLEIKPNYPEAHYNLGLALKEQGDLTAAIASYNKALQLRPNYPEAHNNLG 140
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAG----------- 256
AY GD+ + + + + N P N ++L K G A
Sbjct: 141 NAYKDQGDLTAAIASYNSALQLNPNDPETH-NNLGVVLKKQGDPTAAITSYHQALQLQPN 199
Query: 257 ---ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
A+ G + + A AL+ P A + NL NA GD ++
Sbjct: 200 YPEAHYNLGIAFKEQGDLTAAIASYNKALQLKPNDADTYNNLGNALKEQGDLTAAIDSFN 259
Query: 314 KAAKLEPNCMSTRYAVAVSRI 334
KA +L+PN ++ A++ +
Sbjct: 260 KALQLKPNFPDAQWNSALTML 280
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 85/221 (38%), Gaps = 20/221 (9%)
Query: 124 HHAQCLLPESSGDNSLDKE-----LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLK 178
H ++ L +SS D+ + +E ++ L+E S +E + + T +V+ L +
Sbjct: 18 HTSRKKLGQSSEDHFIKEEEAVALMDQGRLQEAESIYRELIAAGTNNHIVYGNLAALCGM 77
Query: 179 SGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALI 238
GR I +L L + PN + NLG+A + GD+ + + + N+P A
Sbjct: 78 QGRFSELIKLLRRTLEIKPNYPEAHYNLGLALKEQGDLTAAIASYNKALQLRPNYPEAHN 137
Query: 239 NYA---------ALLLCKYGSVLAGAGANTGE-----GACLDQASAVNVAKECLLAALKA 284
N + Y S L N E G L + A AL+
Sbjct: 138 NLGNAYKDQGDLTAAIASYNSALQ-LNPNDPETHNNLGVVLKKQGDPTAAITSYHQALQL 196
Query: 285 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
P NL A+ GD ++ KA +L+PN T
Sbjct: 197 QPNYPEAHYNLGIAFKEQGDLTAAIASYNKALQLKPNDADT 237
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 21/190 (11%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIA----------RPELLSLV 121
P AH+ LGL + G A++SY KA + LR A + +L + +
Sbjct: 96 PNYPEAHYNLGLALKEQGDLTAAIASYNKA--LQLRPNYPEAHNNLGNAYKDQGDLTAAI 153
Query: 122 QIHHAQCLL----PESSGDNS--LDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLI 175
+++ L PE+ + L K+ +P ++ +++Q LG+
Sbjct: 154 ASYNSALQLNPNDPETHNNLGVVLKKQGDPTA---AITSYHQALQLQPNYPEAHYNLGIA 210
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
+ G L ++I+ + L + PN+ D NLG A + GD+ + F + N P
Sbjct: 211 FKEQGDLTAAIASYNKALQLKPNDADTYNNLGNALKEQGDLTAAIDSFNKALQLKPNFPD 270
Query: 236 ALINYAALLL 245
A N A +L
Sbjct: 271 AQWNSALTML 280
>gi|427416747|ref|ZP_18906930.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
gi|425759460|gb|EKV00313.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
Length = 286
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 80/215 (37%), Gaps = 43/215 (20%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
++ K ++ D + A G+I ++ G+L+ +IS S +A+DP NLG+AY
Sbjct: 17 ITATKPTLAQDFQSAEAALEQGVIHVQQGQLEDAISAFRSAVALDPTLAIAHYNLGLAYR 76
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASA- 270
+ +M+ +A F D A +N A LL +G LDQA +
Sbjct: 77 EQSEMQAAADAFWQATQADDQFTMAYVNLGAALL---------------DGGNLDQAESY 121
Query: 271 ---------------------------VNVAKECLLAALKADPKAAHIWANLANAYYLTG 303
+ VA + L A++ P+A + + Y
Sbjct: 122 LQRAVTLEPQLGIGHYNLGLVQRRQGKLPVALDSFLKAVEYSPQAPEVHYQIGLIYLQQN 181
Query: 304 DHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAE 338
+ + LE A L+ N Y + ++ E
Sbjct: 182 QLDGAVQALETAISLDSNYPEAHYNLGITHFGRGE 216
>gi|253996225|ref|YP_003048289.1| hypothetical protein Mmol_0852 [Methylotenera mobilis JLW8]
gi|253982904|gb|ACT47762.1| Tetratricopeptide TPR_2 repeat protein [Methylotenera mobilis JLW8]
Length = 701
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 71/174 (40%), Gaps = 20/174 (11%)
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
LGL+ ++ R ++ L LA++P D + + G+A +G+++ S K FQ IL
Sbjct: 42 LGLVYYQTNRNALAVKHLEQALAINPKQVDYLNHYGLALRAAGNIDASIKSFQQAILLQP 101
Query: 232 NHPAALINYAALLLC---------KYGSVLAGAGANTGEGACL--------DQASAV--- 271
+N LL Y VL A L +QA +
Sbjct: 102 KDLDLQLNLGNTLLAANRFEEAASYYHRVLKVKPREDEVRAALCHCLSSLGNQAHTIGNF 161
Query: 272 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
A+ C AL+ P+ A + NL NA G + K +KA +L+PN T
Sbjct: 162 TQAEACFQEALQLGPQDARLLYNLGNAQRELGKPNDAAKQYQKALQLDPNDADT 215
>gi|219884155|gb|ACL52452.1| unknown [Zea mays]
gi|414886538|tpg|DAA62552.1| TPA: hypothetical protein ZEAMMB73_083629 [Zea mays]
Length = 211
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 62/134 (46%)
Query: 103 EILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSD 162
++L+R E D++ EL V+ A G L ++ P ++ + + + + +
Sbjct: 54 QVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAAIKYLQQAIDKWDRDE 113
Query: 163 TRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKC 222
A V+N LG+ + +L +I + + P NLG AY Q D++ + K
Sbjct: 114 QDLAQVYNALGVSYKRENKLDKAIQQFQKAVELQPGYVTAWNNLGDAYEQQKDLKSALKA 173
Query: 223 FQDLILKDQNHPAA 236
F++++L D N+ A
Sbjct: 174 FEEVLLFDPNNKVA 187
>gi|297183434|gb|ADI19566.1| FOG: tpr repeat-protein [uncultured Acidobacteria bacterium
HF0770_27F21]
Length = 333
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 12/169 (7%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
++K +E M ++ V +G +G ++ + LLA +P+N N+G +
Sbjct: 158 VAKYEEFMVANPHLDAVHGNIGNAYRDAGDVEKAREAYEKLLAAEPDNVMANYNMGEMFV 217
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 271
++GDME++ F+ ++ ++ + PA N A L + VL CL+
Sbjct: 218 EAGDMEEALPYFESVLQQNPDDPAVYYNVAELYFSQ--QVL----------GCLEPVPEC 265
Query: 272 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
A AL+ DP + A GD ++ EK +L P
Sbjct: 266 QGAISYYNRALETDPNYLPAHMQIGFALVRLGDIDNAVLAFEKYVELAP 314
>gi|254784361|ref|YP_003071789.1| hypothetical protein TERTU_0098 [Teredinibacter turnerae T7901]
gi|237687029|gb|ACR14293.1| tetratricopeptide repeat domain protein [Teredinibacter turnerae
T7901]
Length = 733
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%)
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
L++ +Q + V + L I L +G L+ +I+ +L + P N + NLGI+Y+ G
Sbjct: 487 LEDCIQRHPKDFVNYKDLARIYLDNGNLEKAITNYKKVLEITPQNNAALNNLGISYYFLG 546
Query: 215 DMEQSAKCFQ 224
+++Q+ K F+
Sbjct: 547 ELKQARKYFE 556
>gi|118365236|ref|XP_001015839.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89297606|gb|EAR95594.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 430
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 101/278 (36%), Gaps = 31/278 (11%)
Query: 168 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
+ N LIL +L I +L + L +P + D + +LG+ Y +S +C
Sbjct: 5 LLNCFNLILQTDNQLLQQIELLKNSLKNNPQDIDTLSSLGLCYQIQKQYNESIQC----- 59
Query: 228 LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPK 287
LI + YG+ A +G + AK+ LL +L+ +PK
Sbjct: 60 ---------LIECQKIAPQNYGAYFNLAQVYISQG-------KLEEAKKQLLRSLEIEPK 103
Query: 288 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQL 347
+H + L+ YY G + + ++ K P ++A + + D Q
Sbjct: 104 YSHPYFQLSQIYYQQGMLEEAKQNIQNYLKFNP-----QHAESYLFLADINEQMNNLNQA 158
Query: 348 SWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGE 407
E I + D ++ I + T A +++ + A
Sbjct: 159 KKCYQEAIKINPKDDQTYLKLGILNLKMELFEDTKQCYLEAL-----KINTLNTQAHNYL 213
Query: 408 SAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 445
F Q + AK +L AL+ DP+ A + NL Y
Sbjct: 214 GLFYLQIKKLKEAKNQILKALEIDPQLAITYVNLGKVY 251
>gi|363748450|ref|XP_003644443.1| hypothetical protein Ecym_1396 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888075|gb|AET37626.1| hypothetical protein Ecym_1396 [Eremothecium cymbalariae
DBVPG#7215]
Length = 573
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 78/191 (40%), Gaps = 15/191 (7%)
Query: 158 SMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDME 217
++Q + + A W LGL+ ++ + S I+ L L VDPNN + + I+Y G +
Sbjct: 311 AVQENRQHADAWLRLGLVQTQNEKELSGINALEHCLKVDPNNLTAMMTVAISYINEG-YD 369
Query: 218 QSAKC---------FQDLILKDQNHPAALINYAALLLCKYGSVL-----AGAGANTGEGA 263
SA + +++ K + A + + ++ +Y V+ G G
Sbjct: 370 VSALTMLGKWLETKYPEVVQKRTDEQADRFSLSKVITDQYLKVINTLPEIDPDVQLGLGV 429
Query: 264 CLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
+ +C AAL P +W L + + + + +A +L+P +
Sbjct: 430 LFYANDEFDKTIDCFKAALHVRPNDECMWNRLGASLANSNRSEEAIQAYHRAIQLKPAFV 489
Query: 324 STRYAVAVSRI 334
RY +AVS +
Sbjct: 490 RARYNLAVSSM 500
>gi|406980754|gb|EKE02316.1| hypothetical protein ACD_20C00399G0001 [uncultured bacterium]
Length = 614
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 80/190 (42%), Gaps = 27/190 (14%)
Query: 73 KNAHAHFLLGLMYQRLGQPLKAVSSYEKAEE-------------ILLRCEADIARPELLS 119
KN+HA++L+ + Y LG A+ Y K E ++L DI E +
Sbjct: 371 KNSHANYLIAVTYNSLGDYANAIKYYNKTIETNPENIDAYVNLAVILSETGDI--KEAVR 428
Query: 120 LVQIHHAQCLLPESSGDNSLDKEL---EPEELEEILSKLKESMQSDTRQAVVWNTLGLIL 176
++I + P S N++ + + ++ L K +++ D+ + + G IL
Sbjct: 429 NMRIAFRKE--PNSCKINTIYGVILSKDESTYKDALEKFDNAIKIDSDASTAYVGKGEIL 486
Query: 177 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD-------MEQSAKCFQDLILK 229
++ R +IS + +L +PNN + LG+ Y + D + +CF +
Sbjct: 487 IRLMRFNEAISTYNEILVKNPNNISAMFMLGVTYIEFADSSNNQAYYHNALECFNKTLKI 546
Query: 230 DQNHPAALIN 239
+ H ++ N
Sbjct: 547 NPEHVESMAN 556
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 23/186 (12%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E +SKL +++ ++A L + L + G Q +I++L +L +DP D LG
Sbjct: 289 EAVSKLSKAISLQEKKAATLYYLAISLAEIGEHQRAITLLEEVLTIDPRYSDAFVKLGSI 348
Query: 210 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 269
Y D ++ +C+++ + + A NY L+ Y S+ G D A+
Sbjct: 349 YNILKDHHKAIECYKNAVNTSIKNSHA--NY--LIAVTYNSL--G-----------DYAN 391
Query: 270 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC--MSTRY 327
A+ + ++ +P+ + NLA TGD + + + + A + EPN ++T Y
Sbjct: 392 AIKYYNKT----IETNPENIDAYVNLAVILSETGDIKEAVRNMRIAFRKEPNSCKINTIY 447
Query: 328 AVAVSR 333
V +S+
Sbjct: 448 GVILSK 453
>gi|339494606|ref|YP_004714899.1| cytochrome c-type biogenesis protein [Pseudomonas stutzeri ATCC
17588 = LMG 11199]
gi|338801978|gb|AEJ05810.1| cytochrome c-type biogenesis protein [Pseudomonas stutzeri ATCC
17588 = LMG 11199]
Length = 406
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 81/197 (41%), Gaps = 23/197 (11%)
Query: 6 DVAEVEGKKINKLGKCRSRISSKMDSALEFGVD---ADGDQSGLGTSSSSREEKVSSLKT 62
D + KI KLG+ I++ + + +G+ D+ + S + V +
Sbjct: 78 DTENSDSPKIAKLGRSVPLIAAVLVPLVGYGLYMHWGASDKVQMARQFSEQPRTVEEMTA 137
Query: 63 GLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ 122
L ++ P +A A + LG Y +P A ++ + E+ R +PELL Q
Sbjct: 138 HLEQAVKEQPDSAEAWYFLGRTYMNQERPADAAKAFARVVELAGR------QPELLG--Q 189
Query: 123 IHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRL 182
AQ +GD ++L+ + E++Q+D ++ LG+ + GR
Sbjct: 190 WAQAQYF----AGDRQWSEQLQ--------ALTDEALQADPQELTSLGLLGIAAYEEGRY 237
Query: 183 QSSISVLSSLLAVDPNN 199
Q ++ L+A P N
Sbjct: 238 QDAVRFWEQLVAALPEN 254
>gi|307197899|gb|EFN78998.1| Transmembrane and TPR repeat-containing protein CG4050
[Harpegnathos saltator]
Length = 982
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 90/226 (39%), Gaps = 38/226 (16%)
Query: 77 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC------EADIARPELLSLVQIHHAQCLL 130
AH +G Y L +A +Y KA+ +L + +A IA L V +
Sbjct: 483 AHINVGRTYNHLKMFKEAEDAYLKAKSLLPKAKPGESYQARIAPNHLNVFVNL------- 535
Query: 131 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
N + K E ++L + SM++D QA + G +L+K R + + V
Sbjct: 536 -----ANLIAKNATRLEEADLLYRQAISMRADYTQAYI--NRGDVLIKLNRTKEAQEVYE 588
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 250
L D NN D NLG+ + + G Q+ + D H AL+N +A+LL + G
Sbjct: 589 RALFYDSNNPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHEQALLN-SAILLQELG- 646
Query: 251 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 296
+A VA+E LL L+ D + NL
Sbjct: 647 ----------------RAELRKVARERLLKLLRKDSNNERVHFNLG 676
>gi|295677297|ref|YP_003605821.1| hypothetical protein BC1002_2251 [Burkholderia sp. CCGE1002]
gi|295437140|gb|ADG16310.1| TPR repeat-containing protein [Burkholderia sp. CCGE1002]
Length = 628
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 73/177 (41%), Gaps = 25/177 (14%)
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ-DLILKD 230
LG L G++ ++I + L + P NLG AY G E +A F+ L L+
Sbjct: 88 LGNALKALGQIDAAIEQFRNALTLAPTFPMAHYNLGNAYASLGRHEDAADAFERSLRLQP 147
Query: 231 QN----------------HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 274
++ H A+ ++ L + G AGA G L+ + A
Sbjct: 148 EDASSHNNLGNALHALGRHAEAIASFRRALELRPGH----AGALNNMGMSLNALDRPDEA 203
Query: 275 KECLLAALKADPK--AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAV 329
C AAL +P+ AAH NLAN + TG H + E A +L+PN Y +
Sbjct: 204 VPCFEAALAVEPRFVAAHF--NLANTFDATGRHAQAVASFEAALRLQPNLPPAIYGM 258
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 104/271 (38%), Gaps = 48/271 (17%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P AH+ LG Y LG+ A ++E++ LR + PE
Sbjct: 113 PTFPMAHYNLGNAYASLGRHEDAADAFERS----LRLQ-----PE--------------- 148
Query: 132 ESSGDNSLDKELEP-EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
++S N+L L E ++ + +++ A N +G+ L R ++
Sbjct: 149 DASSHNNLGNALHALGRHAEAIASFRRALELRPGHAGALNNMGMSLNALDRPDEAVPCFE 208
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 250
+ LAV+P NL + +G Q+ F+ + N P A+ G+
Sbjct: 209 AALAVEPRFVAAHFNLANTFDATGRHAQAVASFEAALRLQPNLPPAIYGM--------GN 260
Query: 251 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGK 310
LA G L++A + DP+ A W L A+ G H ++ +
Sbjct: 261 ALAALGRAEQALPYLERAVGL-------------DPQFALAWLALGTAHQALGAHAAAVR 307
Query: 311 CLEKAAKLEPNCMSTRY--AVAVSRIKDAER 339
L++A +L P+ S A+A ++D ER
Sbjct: 308 ALDQALRLRPDLASAHMNRALAWLAMRDFER 338
>gi|395839356|ref|XP_003792558.1| PREDICTED: transmembrane and TPR repeat-containing protein 1,
partial [Otolemur garnettii]
Length = 836
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 89/199 (44%), Gaps = 27/199 (13%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E+ EE +S LK+S++ A +++L +L + R + + + + + P++ D N
Sbjct: 516 EKKEEAISLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQAGIKNCPDSSDLHNN 575
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
G+ SG E++ +Q I +H A++N G + G N+
Sbjct: 576 YGVFLVDSGFPEKAVTHYQQAIKLSPSHHVAMVN--------LGRLYRSLGENS------ 621
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+A+E AL+ + A I + L YY TG H + + +AA L+P+
Sbjct: 622 -------MAEEWYKRALQVA-RTAEILSPLGALYYNTGRHEEALQIYREAAALQPSQREL 673
Query: 326 RYAVA-----VSRIKDAER 339
R A+A + + K+AE+
Sbjct: 674 RLALAQVLAVMGQTKEAEK 692
>gi|146282886|ref|YP_001173039.1| cytochrome c-type biogenesis protein [Pseudomonas stutzeri A1501]
gi|145571091|gb|ABP80197.1| cytochrome c-type biogenesis protein [Pseudomonas stutzeri A1501]
Length = 406
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 81/197 (41%), Gaps = 23/197 (11%)
Query: 6 DVAEVEGKKINKLGKCRSRISSKMDSALEFGVD---ADGDQSGLGTSSSSREEKVSSLKT 62
D + KI KLG+ I++ + + +G+ D+ + S + V +
Sbjct: 78 DTENSDSPKIAKLGRSVPLIAAVLVPLVGYGLYMHWGASDKVQMARQFSEQPRTVEEMTA 137
Query: 63 GLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ 122
L ++ P +A A + LG Y +P A ++ + E+ R +PELL Q
Sbjct: 138 HLEQAVKEQPDSAEAWYFLGRTYMNQERPADAAKAFARVVELAGR------QPELLG--Q 189
Query: 123 IHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRL 182
AQ +GD ++L+ + E++Q+D ++ LG+ + GR
Sbjct: 190 WAQAQYF----AGDRQWSEQLQ--------ALTDEALQADPQELTSLGLLGIAAYEEGRY 237
Query: 183 QSSISVLSSLLAVDPNN 199
Q ++ L+A P N
Sbjct: 238 QDAVRFWEQLVAALPEN 254
>gi|116329495|ref|YP_799215.1| hypothetical protein LBL_2968 [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116122239|gb|ABJ80282.1| TPR-repeat-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
Length = 1197
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/169 (17%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 53 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 112
R+ ++ + G + K P + ++H+ +G+++ + + ++ S++++ L D
Sbjct: 688 RKGEIDKAEFGFKEILAKKPDSYYSHYQMGIIHLQRKKYEASIDSFDRS----LLLNTDF 743
Query: 113 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 172
+ + ++H SG+ L KE + + +MQ D+ + +
Sbjct: 744 VAARIGKGISMYH--------SGNKKLAKE-----------EFETAMQQDSANELAPYNI 784
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 221
G+IL +I++ ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAIAIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|307731322|ref|YP_003908546.1| hypothetical protein [Burkholderia sp. CCGE1003]
gi|307585857|gb|ADN59255.1| Tetratricopeptide TPR_1 repeat-containing protein [Burkholderia sp.
CCGE1003]
Length = 602
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 67/167 (40%), Gaps = 21/167 (12%)
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
+ ++++ D + A W+ GL GRL + L + PN D N G+A G
Sbjct: 77 MSQALKHDRQDAACWSNRGLAAAALGRLDEATICYDQALQLQPNFADARNNFGVALQAQG 136
Query: 215 DMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 274
+ ++ + ++ I + AL++ A+ G L + A
Sbjct: 137 ALNEAVEQYRLAIASN----PALVD-----------------AHLNLGTALGKLGRFAEA 175
Query: 275 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
C AL+ DP +A N NA+ G+H ++ E+A L P+
Sbjct: 176 LACYRNALQLDPASAEAHFNAGNAHNARGEHEAAVASFERALALRPD 222
>gi|197120109|ref|YP_002140536.1| hypothetical protein [Geobacter bemidjiensis Bem]
gi|197089469|gb|ACH40740.1| TPR domain protein [Geobacter bemidjiensis Bem]
Length = 1450
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
EL+E ++ +E++ D WN +G+ L G L+ ++ LA+ P+ + NL
Sbjct: 1045 ELDEAMASFRENLSRDPGYLPSWNAMGISLQVLGLLEEAVDCYQKALALKPDYLHALNNL 1104
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL 245
G A G + Q+ C++ ++ D + A N A + L
Sbjct: 1105 GTASRSLGLLAQAKSCYEKVLELDPEYADARWNLALVQL 1143
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 72/185 (38%), Gaps = 27/185 (14%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
W+ L L L G + ++ L + V P+ + LG + + G+++++ F++ +
Sbjct: 999 WHNLALALKAQGAVDEALHALRRAVRVAPDYLEARHTLGQLHHERGELDEAMASFRENLS 1058
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+D P L ++ A+ G L + A +C AL P
Sbjct: 1059 RD---PGYLPSWNAM------------------GISLQVLGLLEEAVDCYQKALALKPDY 1097
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLS 348
H NL A G + C EK +L+P R+ +A+ +++ E +
Sbjct: 1098 LHALNNLGTASRSLGLLAQAKSCYEKVLELDPEYADARWNLALVQLQLGEYRE------G 1151
Query: 349 WAGNE 353
W G E
Sbjct: 1152 WQGYE 1156
>gi|307154400|ref|YP_003889784.1| hypothetical protein Cyan7822_4601 [Cyanothece sp. PCC 7822]
gi|306984628|gb|ADN16509.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
Length = 291
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 56/129 (43%), Gaps = 15/129 (11%)
Query: 125 HAQCLLPESSGDNSLDKELEPEELEE-------------ILSKLKESMQSDTRQAVVWNT 171
AQ LLP S +S E + EL E LS+ K S Q W
Sbjct: 24 FAQALLPYSPKLDSEKIEQQGLELAEDAIQLVRFQQPEAALSRAKLSTQLAPGHFQTWFI 83
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS-AKCFQDLILKD 230
LG + ++ + I L+ LA++P LG AYFQ GD + + A+ + L LK
Sbjct: 84 LGTLYIQQEEFDAGIDALNRALALEPKEAGIFFTLGSAYFQRGDYQTAIAQIDKGLKLKP 143
Query: 231 QNHPAALIN 239
N PAAL +
Sbjct: 144 DN-PAALFD 151
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 84/186 (45%), Gaps = 26/186 (13%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
++ EE + + L ++ + ++A ++ TLG + G Q++I+ + L + P+N
Sbjct: 89 IQQEEFDAGIDALNRALALEPKEAGIFFTLGSAYFQRGDYQTAIAQIDKGLKLKPDNPAA 148
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 262
+ +LG +Y++ ++ + +Q + D+ A IN L+ + G + G
Sbjct: 149 LFDLGNSYYKLQKYPKAVEAYQKAVSVDKKFWPA-INNMGLIKYEQGDL---------AG 198
Query: 263 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
A +AV + KE +A+P+ A LA A Y G + K E A L+
Sbjct: 199 AIKQWQAAVAIDKE------QAEPQLA-----LAVATYAQGRQQEGLKMAEAALTLD--- 244
Query: 323 MSTRYA 328
+RYA
Sbjct: 245 --SRYA 248
>gi|254168890|ref|ZP_04875730.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
gi|197622154|gb|EDY34729.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
Length = 1297
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
W LG R++ +I+ L + +DPN+ NLGI Y + G+ E++ KCF++ I
Sbjct: 214 WVYLGAAYANIDRMREAINALKKAIKIDPNDKKSWINLGILYKKRGEYEEALKCFKEAIK 273
Query: 229 KDQN 232
D N
Sbjct: 274 IDPN 277
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 68/173 (39%), Gaps = 40/173 (23%)
Query: 175 ILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSA-------------- 220
I+ K G+ + IS+ +L ++PN+ + + AY + G +E +
Sbjct: 390 IMKKKGQWERVISICEDILKIEPNDIGSLVDEAKAYREVGKLESALNFAIRATEIEPSNI 449
Query: 221 ---KCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG---ACLDQASAVNV- 273
K +D I KD N P +IN AG + EG LD A A +
Sbjct: 450 ELWKLRKD-IAKDLNKPQEIIN-------------AGTQIISMEGDFETYLDLARAYYIV 495
Query: 274 -----AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
AK+ L LK + W L YY GD ++ EKA+ + PN
Sbjct: 496 SRYDDAKKTLERGLKLKEDSDEGWNLLGMIYYKLGDLENARYSFEKASTINPN 548
>gi|395825639|ref|XP_003786032.1| PREDICTED: tetratricopeptide repeat protein 37 [Otolemur garnettii]
Length = 1564
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 88/212 (41%), Gaps = 15/212 (7%)
Query: 134 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL--GLILLKSGRLQSSISVLSS 191
SG ++D +E E++E L+ L Q + W L GL LK+G+ +++ L +
Sbjct: 530 SGGAAVDLSVELEDMETALAILTTVTQKASAGTAKWAWLRRGLYYLKAGQPSQAVADLQA 589
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL--LLCKYG 249
L DP + +C +LG AY G + K F + ++ AA+ +L KY
Sbjct: 590 ALRADPKDSNCWESLGEAYLSRGGYTTALKSFTKASELNPESTYSVFKVAAIQQVLGKYK 649
Query: 250 SVLAGAGANTGEGACLDQASAVNVAKECLLAALKA------DPKAAHIWANLANAYYLTG 303
+A + D A+ EC L KA D KA +
Sbjct: 650 EAVAQYQLIIKKTE--DYVPALKGLGECHLMMAKAALVDYLDGKAVDYIEKALEYFTWAL 707
Query: 304 DHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 335
HR+ CL KL + ++ YAV+ S++K
Sbjct: 708 QHRADVSCL---WKLVGDACTSLYAVSPSKVK 736
>gi|254417461|ref|ZP_05031201.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196175726|gb|EDX70750.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 374
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 68/185 (36%), Gaps = 21/185 (11%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
L+ + + ++ +++++ W LGL L R + +I+ ++P +
Sbjct: 18 LQGGDFDAAVALFQDAVKLTPENGEAWTGLGLALGHLQRYEEAIASFDQAGVLNPQDASI 77
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 262
N GI G E + F +I ++ HP A G+ L G N
Sbjct: 78 WLNRGIVLSDWGKHEAAIASFDQVIEREPTHPEA--------WNSRGTSLMILGRNKEAL 129
Query: 263 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
A DQA A N P W+N N G H+++ K +KA + PN
Sbjct: 130 ASFDQAIACN-------------PNYDKAWSNRGNVLTNLGRHKAALKSFDKALHISPNH 176
Query: 323 MSTRY 327
Y
Sbjct: 177 PEIWY 181
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 10/138 (7%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E L +++++ D + WN GL + + GRLQ +++ L P N + N G
Sbjct: 228 KEALLYYEKALEFDPNETHCWNNRGLTMRRLGRLQDAVASYDRALECMPENYEAWDNRGY 287
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
A + G ++ F + + +H A+ N G A G T ++QA
Sbjct: 288 ALVKMGRYREAMASFDKALEVNPDHVNAVYN--------KGYCYAAQGKVTLAVNYIEQA 339
Query: 269 SAVNVAKECLLAALKADP 286
VN K L K DP
Sbjct: 340 IKVNPQK--YLPVAKTDP 355
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 61/162 (37%), Gaps = 19/162 (11%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
E ++ + ++ + WN+ G L+ GR + +++ +A +PN N G
Sbjct: 92 EAAIASFDQVIEREPTHPEAWNSRGTSLMILGRNKEALASFDQAIACNPNYDKAWSNRGN 151
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVLAG-----------A 255
G + + K F + NHP N LL L K +A
Sbjct: 152 VLTNLGRHKAALKSFDKALHISPNHPEIWYNQGCLLMQLQKRDDAIASFNKALELKPDHI 211
Query: 256 GANTGEGACLDQASAVNVAKECLL---AALKADPKAAHIWAN 294
G+ +G + S + KE LL AL+ DP H W N
Sbjct: 212 GSWINKGIVI---SEMGREKEALLYYEKALEFDPNETHCWNN 250
>gi|321476570|gb|EFX87530.1| hypothetical protein DAPPUDRAFT_311979 [Daphnia pulex]
Length = 622
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 90/229 (39%), Gaps = 39/229 (17%)
Query: 136 DNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAV 195
+ L K LE +L + + +++ D W LGL L ++ + +I+ LA+
Sbjct: 332 NTGLQKRLE-GDLPSAILLFEAALKKDPEHVKAWEVLGLTLAENEQDPGAITAYKRCLAL 390
Query: 196 DPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP---------AALINYAALLLC 246
+P N + L ++Y Q+ + +D + +N+P +A +N
Sbjct: 391 EPTNLVAMMGLAVSYTNESYQLQACQALEDWL---RNNPKYGHLTSPSSARVNERER--- 444
Query: 247 KYGSVLAGAGAN-----------------------TGEGACLDQASAVNVAKECLLAALK 283
+ S+++G N TG G L+ + + A +C AAL+
Sbjct: 445 TFTSLVSGDTFNRVQDMYLTAARLQPSQDLDPDVQTGLGVLLNLSGDFDKAPDCFRAALQ 504
Query: 284 ADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 332
P + +W L G + + KA +L P + RY +AVS
Sbjct: 505 MKPNDSLLWNRLGATLANGGKSEEAIESYYKALELSPGFIRARYNLAVS 553
>gi|428223797|ref|YP_007107894.1| glycosyl transferase family protein [Geitlerinema sp. PCC 7407]
gi|427983698|gb|AFY64842.1| glycosyl transferase family 9 [Geitlerinema sp. PCC 7407]
Length = 4135
Score = 46.6 bits (109), Expect = 0.030, Method: Composition-based stats.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 24/197 (12%)
Query: 159 MQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQ 218
+Q D QA LG L R +++ +A+DP D NLG Y D+ Q
Sbjct: 2281 LQPDFAQAHY--NLGTALQAQKRDDEALAAYQRAIALDPGLADAYNNLGNLYRSRRDIPQ 2338
Query: 219 SAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECL 278
+ ++ I P A I ++ L GS+L A G A QA
Sbjct: 2339 AIAAYRQAI---DLQPQAAIYHSNL-----GSILQQADQYEGAIAHYQQA---------- 2380
Query: 279 LAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAE 338
+ DP+ + NL NAYY G+ + ++ + +P+C+ ++A+A+ ++ +
Sbjct: 2381 ---IDLDPQLSVARYNLGNAYYDLGEFDRAIALYQQVLRADPDCVQAQFAMALVWLQQGD 2437
Query: 339 -RSQEPTEQLSWAGNEM 354
R + WA E+
Sbjct: 2438 FRRGFAGYEARWALGEL 2454
Score = 40.0 bits (92), Expect = 2.3, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 15/161 (9%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ------ 122
R P A AH L Q LGQP A+ Y +A + L A L +L++
Sbjct: 1241 RLAPTLADAHARLASTLQELGQPDDAIDHYRQA--VTLDSNLAGAHNNLANLLRSRDDFE 1298
Query: 123 -----IHHAQCLLPE-SSGDNSLDKEL-EPEELEEILSKLKESMQSDTRQAVVWNTLGLI 175
A LLP+ + G +L L E L E ++ ++++ A N LG
Sbjct: 1299 GASRHYQAALALLPDFAEGHYNLGGVLKELGRLPEAIAAYQQALDLKPGLARAHNNLGAC 1358
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 216
++G L+ +I+ +A++P+ + NLG ++GD+
Sbjct: 1359 YAETGDLERAIAAHERAIALEPDYVEAHDNLGHVLLRAGDL 1399
Score = 39.3 bits (90), Expect = 4.8, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 45/84 (53%)
Query: 158 SMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDME 217
++ ++ A++ LG++ + R +++++ +A+DP D NLG+A D+E
Sbjct: 3270 ALLTEQPTALLQTMLGILAFQEQRPEAALAHYRQAIALDPGYADAHYNLGVALSCHSDLE 3329
Query: 218 QSAKCFQDLILKDQNHPAALINYA 241
+ C+Q +++ + AAL N A
Sbjct: 3330 GAIACYQRVLVLQPRYFAALHNLA 3353
>gi|254166562|ref|ZP_04873416.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
gi|289596148|ref|YP_003482844.1| TPR repeat-containing protein [Aciduliprofundum boonei T469]
gi|197624172|gb|EDY36733.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
gi|289533935|gb|ADD08282.1| TPR repeat-containing protein [Aciduliprofundum boonei T469]
Length = 1297
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
W LG R++ +I+ L + +DPN+ NLGI Y + G+ E++ KCF++ I
Sbjct: 214 WVYLGAAYANIDRMREAINALKKAIKIDPNDKKSWINLGILYKKRGEYEEALKCFKEAIK 273
Query: 229 KDQN 232
D N
Sbjct: 274 IDPN 277
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 40/173 (23%)
Query: 175 ILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSA-------------- 220
I+ K G+ + IS+ +L ++PN+ + + AY + G +E +
Sbjct: 390 IMKKKGQWERVISICEDILKIEPNDIGSLVDEAKAYREVGKLESALNFAIRATEIEPSNI 449
Query: 221 ---KCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG---ACLDQASAVNV- 273
K +D I KD N P +IN AG + EG LD A A +
Sbjct: 450 ELWKLRKD-IAKDLNKPQEIIN-------------AGTQIISMEGDFETYLDLARAYYIV 495
Query: 274 -----AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
AK+ L LK + + W L YY GD ++ EKA+ + PN
Sbjct: 496 SRYDDAKKTLERGLKLNEDSDEGWNLLGMIYYKLGDLENARYSFEKASTINPN 548
>gi|418720490|ref|ZP_13279688.1| tetratricopeptide repeat protein [Leptospira borgpetersenii str. UI
09149]
gi|410743468|gb|EKQ92211.1| tetratricopeptide repeat protein [Leptospira borgpetersenii str. UI
09149]
Length = 1197
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/169 (17%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 53 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 112
R+ ++ ++G + K P + ++H+ +G+++ + + ++ S++++ L D
Sbjct: 688 RKGEIDKAESGFKEILAKKPDSYYSHYQMGIIHLQRKKYEASIDSFDRS----LLLNTDF 743
Query: 113 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 172
+ + ++H SG+ L KE + +MQ D+ + +
Sbjct: 744 VAARIGKGISMYH--------SGNKKLAKE-----------GFETAMQQDSANELAPYNI 784
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 221
G+IL +I++ ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAIAIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|307173081|gb|EFN64211.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit [Camponotus floridanus]
Length = 1092
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ ++ + + P+ D NL A +GDMEQ+ + +
Sbjct: 131 YSNLGNVYKERGQLQEALENYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAY----- 185
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ Y L C + G L + ++ AK C L A++ P
Sbjct: 186 ------VTALQYNPDLYC----------VRSDLGNLLKALARLDEAKACYLKAIETRPDF 229
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 230 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFL 264
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 126/314 (40%), Gaps = 65/314 (20%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
AV W+ LG + G + +I +A+DPN D AY G++ + A+ F
Sbjct: 230 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLD-------AYINLGNVLKEARIFDR 282
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL-DQASAVNVAKECLLAALKA 284
+ AA + AL L +V+ G AC+ + +++A + A++
Sbjct: 283 AV-------AAYLR--ALNLSPNNAVVH------GNLACVYYEQGLIDLAIDTYRRAIEL 327
Query: 285 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP------NCMSTRYAVAVSRIKDAE 338
P + NLANA G + +C A +L P N + YAV+ + IK +
Sbjct: 328 QPNFPDAYCNLANALKEKGQVVEAEECYNTALRLCPTHADSLNNLVQTYAVSTANIKREQ 387
Query: 339 -----------RSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAA 387
++ E + + A + +AS+L++ + E + + +Q T A
Sbjct: 388 GYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLN-EALMHYKEAIRIQPT---FAD 443
Query: 388 AFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYL 447
A+ N L +M++ G A +C A++ +P A +NLA+
Sbjct: 444 AYSNMGNTLKEMQDIQG---------------ALQCYTRAIQINPAFADAHSNLASI--- 485
Query: 448 TGDHRSSGKCLEKV 461
H+ SG E +
Sbjct: 486 ---HKDSGNIPEAI 496
>gi|170740913|ref|YP_001769568.1| hypothetical protein M446_2695 [Methylobacterium sp. 4-46]
gi|168195187|gb|ACA17134.1| TPR repeat-containing protein [Methylobacterium sp. 4-46]
Length = 292
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
++ L + +Q + +NT G ++G +I+ + + +DPN+ N +AY
Sbjct: 56 IASLTDVIQRNPSDPAAYNTRGAAYARAGNYGEAIADFTKAVQLDPNSASAYSNRALAYR 115
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAAL 243
QSG + + + F + D N+ AA I A L
Sbjct: 116 QSGRNDAALQDFTRALTADPNYSAAYIGRANL 147
>gi|322419153|ref|YP_004198376.1| PEP-CTERM system TPR-repeat lipoprotein [Geobacter sp. M18]
gi|320125540|gb|ADW13100.1| PEP-CTERM system TPR-repeat lipoprotein [Geobacter sp. M18]
Length = 881
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
++ +E LS L S+Q+D ++ L + + G + L+ L DP N +
Sbjct: 138 KKYDEALSYLTRSLQADPGRSSAKLELAALHISMGNEDRARRALNELTGADPRNFKALYM 197
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK 247
L + +G+ +Q+A ++ ++ +D+N PAA LLL K
Sbjct: 198 LAMLELAAGNKDQAAAVYRKILQQDKNQPAARFKLGGLLLEK 239
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
EE L + + D V +T+G L K+GR Q ++ VL + P + +LG+
Sbjct: 783 EEALRLAISAFRLDPGNPSVTDTVGYALYKNGRSQEAVKVLERAATLLPGDPTVRYHLGL 842
Query: 209 AYFQSGDMEQSAKCFQD 225
AY Q+GD ++ + QD
Sbjct: 843 AYHQAGDKARAQQALQD 859
>gi|40063717|gb|AAR38498.1| TPR repeat protein [uncultured marine bacterium 583]
Length = 733
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
EL+E + ++++ V LGL L + GRL +++ L + P+ + NL
Sbjct: 58 ELDEAVKSFEKALAIKPDYTEVNYNLGLTLQELGRLDAAVKSYEQALDIQPDYAEAHNNL 117
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL---------LCKYGSVLA---- 253
GI + G ++ + +C++ + + ++ A N L + Y LA
Sbjct: 118 GITLKELGQLDAAVQCYEKALAINPDYAEAHNNLGNALKDLNQLDAAVKSYEKTLAINPD 177
Query: 254 GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
A A+ G L ++ A +C L +P A NL N ++ KC E
Sbjct: 178 YAEAHNNLGNVLKDLGQLDAAVKCYEKTLAINPDYAEAHNNLGNVLQDIDQLDAAVKCYE 237
Query: 314 KAAKLEPNCMSTRYAVAVSRIKDAERSQE 342
KA + P+ + Y+ + +KD R E
Sbjct: 238 KALAINPD-FAEAYSNRGNVLKDLNRLDE 265
>gi|302771315|ref|XP_002969076.1| hypothetical protein SELMODRAFT_90520 [Selaginella moellendorffii]
gi|302822390|ref|XP_002992853.1| hypothetical protein SELMODRAFT_136122 [Selaginella moellendorffii]
gi|300139301|gb|EFJ06044.1| hypothetical protein SELMODRAFT_136122 [Selaginella moellendorffii]
gi|300163581|gb|EFJ30192.1| hypothetical protein SELMODRAFT_90520 [Selaginella moellendorffii]
Length = 222
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%)
Query: 103 EILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSD 162
+IL+R E ++A ELL V+ A + G L K+L P + + +K+ +
Sbjct: 67 QILVRRELEMAAKELLERVRTSQATPVEYYELGAVMLRKKLYPVARKYLEQAIKKWEDDE 126
Query: 163 TRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKC 222
A V+N LG +++ +IS + + P NLG +Y + D +++ K
Sbjct: 127 QELAQVYNALGFAYFSENKVEQAISHYEKAVTLSPGYTVAWNNLGSSYEKRKDWKRALKA 186
Query: 223 FQDLILKDQNHPAAL 237
++ + D + AL
Sbjct: 187 YEQTLQFDPRNKVAL 201
>gi|229577290|ref|NP_001153341.1| O-glycosyltransferase [Nasonia vitripennis]
Length = 1061
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ ++ + + P+ D NL A +GDMEQ+ + +
Sbjct: 106 YSNLGNVYKERGQLQEALENYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAY----- 160
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ Y L C + G L + ++ AK C L A++ P
Sbjct: 161 ------VTALQYNPDLYC----------VRSDLGNLLKALARLDEAKACYLKAIETRPDF 204
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 205 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFL 239
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 125/306 (40%), Gaps = 57/306 (18%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
AV W+ LG + G + +I +A+DPN D AY G++ + A+ F
Sbjct: 205 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLD-------AYINLGNVLKEARIFDR 257
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL-DQASAVNVAKECLLAALKA 284
+ AA + AL L +V+ G AC+ + +++A + A++
Sbjct: 258 AV-------AAYLR--ALNLSPNNAVV------HGNLACVYYEQGLIDLAIDTYRRAIEL 302
Query: 285 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA-VSR----IKDAER 339
P + NLANA G + +C A +L P + +A + R I++A R
Sbjct: 303 QPNFPDAYCNLANALKEKGQVVEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATR 362
Query: 340 ----SQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENE 395
+ E + + A + +AS+L++ + E + + +Q T A A+ N
Sbjct: 363 LYLKALEVFPEFAAAHSNLASVLQQQGKLN-EALMHYKEAIRIQPT---FADAYSNMGNT 418
Query: 396 LSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 455
L +M++ G A +C A++ +P A +NLA+ H+ SG
Sbjct: 419 LKEMQDVQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSG 457
Query: 456 KCLEKV 461
E +
Sbjct: 458 NIPEAI 463
>gi|456969917|gb|EMG10807.1| tetratricopeptide repeat protein [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
Length = 177
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 63/160 (39%), Gaps = 21/160 (13%)
Query: 161 SDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSA 220
++ ++A +N G+ LL G L + S + ++P + + + N+G+ Y G ++Q+
Sbjct: 9 NNIKKAFEFNQQGVALLSKGNLVQARSFFEKAVKLNPQSPEYVNNIGVTYLNEGKLDQAI 68
Query: 221 KCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLA 280
F +D N+ A N +A E A + L
Sbjct: 69 VFFAKSTERDPNYVRAFYNLG----------VAYQNQQNNEKAI-----------QNYLK 107
Query: 281 ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
AL D A I+ NL Y G+ + + +K ++ P
Sbjct: 108 ALSIDKAFAEIYFNLGIVYARIGNKKQAIDSYQKFIEVAP 147
>gi|428219228|ref|YP_007103693.1| hypothetical protein Pse7367_3015 [Pseudanabaena sp. PCC 7367]
gi|427991010|gb|AFY71265.1| Tetratricopeptide TPR_1 repeat-containing protein [Pseudanabaena
sp. PCC 7367]
Length = 1089
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 81/200 (40%), Gaps = 37/200 (18%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL---SLVQIHHAQC 128
P AH+ LG Y + G P A+S Y E + + E A L SLV+ H
Sbjct: 807 PDLVFAHWFLGQSYDQQGLPELALSQY--IEALTIEPETFTAESHFLLGNSLVERHRY-- 862
Query: 129 LLPESSGDNSLDK-----ELEPEELEEILSKLKE-SMQSDTRQAVVWNT----------- 171
D +L+ EL+P L+ +++K ++Q + AV T
Sbjct: 863 -------DQALEFYQRAIELKPGYLDAHRNRIKALALQGNLAAAVQAQTDLVAADPDLLS 915
Query: 172 ------LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
LG+ +++ +L +I + + +DP N D NLG + Q + + C+Q+
Sbjct: 916 AKECNELGMHCIQAEKLAEAIHCFENAIQIDPENADAHFNLGNTFAQRNQVRDAIICYQE 975
Query: 226 LILKDQNHPAALINYAALLL 245
I D N N LLL
Sbjct: 976 AIAIDPNFAQIYFNLGVLLL 995
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 171 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 230
LG+ L+S L+ ++ L+ + PN+ D NLGIA+ + G++E +A + I +
Sbjct: 164 NLGVAFLRSSNLKQAVREFEQLVTIAPNSSDAHCNLGIAHHRLGELETAAASLETAIALE 223
Query: 231 QNHPAALIN 239
+H AL N
Sbjct: 224 PSHMQALYN 232
>gi|340715918|ref|XP_003396454.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 2 [Bombus terrestris]
Length = 1095
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ ++ + + P+ D NL A +GDMEQ+ + +
Sbjct: 141 YSNLGNVYKERGQLQEALENYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAY----- 195
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ Y L C + G L + ++ AK C L A++ P
Sbjct: 196 ------VTALQYNPDLYC----------VRSDLGNLLKALARLDEAKACYLKAIETRPDF 239
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 240 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFL 274
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 125/306 (40%), Gaps = 57/306 (18%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
AV W+ LG + G + +I +A+DPN D AY G++ + A+ F
Sbjct: 240 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLD-------AYINLGNVLKEARIFDR 292
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL-DQASAVNVAKECLLAALKA 284
+ AA + AL L +V+ G AC+ + +++A + A++
Sbjct: 293 AV-------AAYLR--ALNLSPNNAVV------HGNLACVYYEQGLIDLAIDTYRRAIEL 337
Query: 285 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA-VSR----IKDAER 339
P + NLANA G + C A +L P+ + +A + R I++A R
Sbjct: 338 QPNFPDAYCNLANALKEKGQVVEAEDCYNTALRLCPSHADSLNNLANIKREQGYIEEATR 397
Query: 340 ----SQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENE 395
+ E + + A + +AS+L++ + E + + +Q T A A+ N
Sbjct: 398 LYLKALEVFPEFAAAHSNLASVLQQQGKLN-EALMHYKEAIRIQPT---FADAYSNMGNT 453
Query: 396 LSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 455
L +M++ G A +C A++ +P A +NLA+ H+ SG
Sbjct: 454 LKEMQDIQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSG 492
Query: 456 KCLEKV 461
E +
Sbjct: 493 NIPEAI 498
>gi|322421642|ref|YP_004200865.1| hypothetical protein GM18_4175 [Geobacter sp. M18]
gi|320128029|gb|ADW15589.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp.
M18]
Length = 1104
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 72/172 (41%), Gaps = 23/172 (13%)
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
LG L + GR++ + L + P N NLG+A G+ EQ+ F + I D
Sbjct: 81 LGFALARVGRMEEAAQKLREACRLAPENAGYRNNLGLALSALGEGEQAQASFLEAIRLDP 140
Query: 232 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD-PKAAH 290
+P L N A+L ++G A A+ E L L+ D P+A H
Sbjct: 141 LYPEPLSNL-AILFERFG----------------QSAEAIRSLSEAL--RLRPDYPEAHH 181
Query: 291 IWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQE 342
NLAN G HR + +A +L P + A+ + + AE ++E
Sbjct: 182 ---NLANTLKSQGRHREAIAHYREALRLRPGYEEAQSALLFTLLYPAEGAEE 230
>gi|253702418|ref|YP_003023607.1| hypothetical protein GM21_3832 [Geobacter sp. M21]
gi|251777268|gb|ACT19849.1| TPR repeat-containing protein [Geobacter sp. M21]
Length = 688
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
EL+E + +E++ D WN LG+ L G L+ ++ LA+ P+ + NL
Sbjct: 283 ELDEAQACFRENLSRDPGYLPSWNALGISLQLQGLLEEAVDCYQKALALKPDYLHALNNL 342
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL 245
G A G +EQ+ C+ ++ D+ + A N A + L
Sbjct: 343 GTASRSLGLLEQAKACYLRVLEIDEGYADARWNLALVQL 381
>gi|449465368|ref|XP_004150400.1| PREDICTED: uncharacterized protein LOC101215394 [Cucumis sativus]
gi|449496895|ref|XP_004160255.1| PREDICTED: uncharacterized LOC101215394 [Cucumis sativus]
Length = 313
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 66/142 (46%)
Query: 95 VSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSK 154
V ++ ++L+R E D++ EL V+ A + G L ++ P + +L
Sbjct: 148 VGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKFLLQA 207
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
+ + D A V+N LG+ ++ +L I+ + + + P NLG AY +
Sbjct: 208 IDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAYEKKK 267
Query: 215 DMEQSAKCFQDLILKDQNHPAA 236
+ + + K F++++L D N+ A
Sbjct: 268 EYKSALKAFEEVLLFDPNNKLA 289
>gi|438003936|ref|YP_007273679.1| TPR repeat:Sel1-like repeat [Tepidanaerobacter acetatoxydans Re1]
gi|432180730|emb|CCP27703.1| TPR repeat:Sel1-like repeat [Tepidanaerobacter acetatoxydans Re1]
Length = 173
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%)
Query: 137 NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVD 196
N + +E E ++ E + D A+ +N LG+I ++ L+ + L ++
Sbjct: 6 NKAEHHMERGEYQQARKIYNEILLIDPNNAIAYNKLGVISVREENLEQAKIYFIKALELN 65
Query: 197 PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL 243
P NLG YF+ G+ E++ C++ I D ++P N A +
Sbjct: 66 PKLSSASSNLGNIYFEKGNFEKAKDCYEKAIAIDPDNPVPYNNLAVI 112
>gi|427711565|ref|YP_007060189.1| hypothetical protein Syn6312_0417 [Synechococcus sp. PCC 6312]
gi|427375694|gb|AFY59646.1| tetratricopeptide repeat protein [Synechococcus sp. PCC 6312]
Length = 335
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 73/168 (43%), Gaps = 21/168 (12%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
+++++ + R + L +IL + G Q++I ++ ++P N + +LGI Y GD
Sbjct: 107 RQAIRLNPRYVQAYQGLAVILARLGDTQTAIQTYRQIIVMEPRNWEAFQSLGILYLNQGD 166
Query: 216 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 275
Q+ + N+P +N G L +G T A L+QA+++
Sbjct: 167 ANQALTALRQASQFVPNNPNVQLN--------LGQALLQSGDKTQGLAALEQAASLG--- 215
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
+ D +I + + L +++ + + ++A +L PN +
Sbjct: 216 -------QGD---GNIQLTVGKVFLLQNNYQGAIRAFQRATQLLPNSI 253
>gi|405375533|ref|ZP_11029563.1| TPR repeat protein [Chondromyces apiculatus DSM 436]
gi|397086260|gb|EJJ17390.1| TPR repeat protein [Myxococcus sp. (contaminant ex DSM 436)]
Length = 271
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P +AHAH L +Y A+S Y A + L E+ A L + H + +
Sbjct: 42 PSSAHAHDNLATVYAEKKLFRDALSEYLTA--LKLEPESATAHYNLACFLSTHAGEMAVE 99
Query: 132 ESSGDNSLDKELEPEEL------------EEILSKLKESMQSDTRQAVVWNTLGLILLKS 179
E LD E L EE + +L+ +++ D++ A + L +++
Sbjct: 100 EYKEAIELDPEYPDAHLNLGLTYADQGRVEEAMRELQTAIELDSQDAFPRHELAALMMDE 159
Query: 180 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 224
G +S+I+ L ++ ++P+N + +LGI Y Q G ++ + ++
Sbjct: 160 GDYRSAITQLKEVVRLEPDNFEAQLDLGICYAQKGFYAEAERAYE 204
>gi|343083369|ref|YP_004772664.1| hypothetical protein [Cyclobacterium marinum DSM 745]
gi|342351903|gb|AEL24433.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyclobacterium
marinum DSM 745]
Length = 237
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 78/193 (40%), Gaps = 23/193 (11%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
L+ ++ E + L +++DT A WN G+I ++G+ +I S + +D +N
Sbjct: 33 LDKQDFETAIGHLNRLVENDTSHAPAWNARGVIFFQTGKWDDAIDSFSRSIDLDESNYKP 92
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL-INYAALLLCKYGSVLAGAGANTGE 261
N G Y + + + + L D N L IN + Y LA G E
Sbjct: 93 FFNRGNVYMEKEEYKMA--------LVDYNRANGLDINQVDIY---YNRGLALLGLEMYE 141
Query: 262 GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
A +D AL A+P+ + N A A+ D ++ LE+ +++
Sbjct: 142 DALID-----------FDKALHANPEQPQVLFNKAKAHLGNNDPLTAIATLEELTRIDKR 190
Query: 322 CMSTRYAVAVSRI 334
+ Y + V+ +
Sbjct: 191 NGAAFYLLGVTEM 203
>gi|428184391|gb|EKX53246.1| hypothetical protein GUITHDRAFT_64500, partial [Guillardia theta
CCMP2712]
Length = 171
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
+ + Q + R + L +L + G+LQS+ S L + P+N +C+ NL I G
Sbjct: 25 FQRATQENPRDSRSLFGLATVLHRMGKLQSAESFYRKSLEIQPDNVECLTNLSILLDDEG 84
Query: 215 DMEQSAKCFQDLILKDQNHPAALINYAALLLCK 247
+E++ C + K+ L NY LLCK
Sbjct: 85 RLEEACCCMERAFTKNSRDLGVLSNYGH-LLCK 116
>gi|392347771|ref|XP_342789.4| PREDICTED: transmembrane and TPR repeat-containing protein 1-like
isoform 2 [Rattus norvegicus]
Length = 942
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 139/338 (41%), Gaps = 54/338 (15%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E+ EE + LKES++ A +++L +L + R + + V + + P++ D N
Sbjct: 622 EKTEEAIVLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDVYQAGIKNCPDSSDLHNN 681
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
+ SG E++ +Q I +H A++N G + G N+
Sbjct: 682 YAVFLVDSGFPEKAVAHYQQAIQLSPSHHVAVVNL--------GRLHRSLGENS------ 727
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+A+E AL+ + A + + L YY TG H+ + + +A L+P+
Sbjct: 728 -------MAEEWYRRALQVA-RTAEVLSPLGALYYNTGRHKEALEVYREAVSLQPSQRDL 779
Query: 326 RYAVA-----VSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAV-- 378
R A+A + + K+AE+ + S + +P +E + +A+
Sbjct: 780 RLALAQVLAVMGQTKEAEK--------------ITSHIVSEEPRCLE---CYRLLSAIYS 822
Query: 379 QKTHHEVAAAFETEENELS-KMEECAGAGESAF-----LDQASAVNVAKECLLAALKADP 432
++ HHE A E E L K ++ E F L + + ++ A E AA+ DP
Sbjct: 823 KQEHHE--KALEAIEKALQLKPKDPKVISELFFTKGNQLREQNLLDKAFESYEAAVTLDP 880
Query: 433 KAAHIWANLANAYYLTGDHRSSGKCLEKVLMVYCSSNL 470
A W N+ ++ G + + E+ L + S L
Sbjct: 881 DQAQAWMNMGGIRHIQGSYVPARVYYERALRLVPESKL 918
>gi|350396796|ref|XP_003484668.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
[Bombus impatiens]
Length = 1065
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ ++ + + P+ D NL A +GDMEQ+ + +
Sbjct: 111 YSNLGNVYKERGQLQEALENYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAY----- 165
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ Y L C + G L + ++ AK C L A++ P
Sbjct: 166 ------VTALQYNPDLYC----------VRSDLGNLLKALARLDEAKACYLKAIETRPDF 209
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 210 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFL 244
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 125/306 (40%), Gaps = 57/306 (18%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
AV W+ LG + G + +I +A+DPN D AY G++ + A+ F
Sbjct: 210 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLD-------AYINLGNVLKEARIFDR 262
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL-DQASAVNVAKECLLAALKA 284
+ AA + AL L +V+ G AC+ + +++A + A++
Sbjct: 263 AV-------AAYLR--ALNLSPNNAVV------HGNLACVYYEQGLIDLAIDTYRRAIEL 307
Query: 285 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA-VSR----IKDAER 339
P + NLANA G + C A +L P+ + +A + R I++A R
Sbjct: 308 QPNFPDAYCNLANALKEKGQVVEAEDCYNTALRLCPSHADSLNNLANIKREQGYIEEATR 367
Query: 340 ----SQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENE 395
+ E + + A + +AS+L++ + E + + +Q T A A+ N
Sbjct: 368 LYLKALEVFPEFAAAHSNLASVLQQQGKLN-EALMHYKEAIRIQPT---FADAYSNMGNT 423
Query: 396 LSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 455
L +M++ G A +C A++ +P A +NLA+ H+ SG
Sbjct: 424 LKEMQDIQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSG 462
Query: 456 KCLEKV 461
E +
Sbjct: 463 NIPEAI 468
>gi|354475677|ref|XP_003500054.1| PREDICTED: tetratricopeptide repeat protein 37-like [Cricetulus
griseus]
gi|344242299|gb|EGV98402.1| Tetratricopeptide repeat protein 37 [Cricetulus griseus]
Length = 1563
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 134 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL--GLILLKSGRLQSSISVLSS 191
SG ++D +E E+ E L+ L Q + A W L GL LK+G+ +++ L +
Sbjct: 530 SGAAAVDLSVELEDTETALAILTAVTQKASAGAAKWAWLRRGLYHLKAGQHSQAVADLQA 589
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 223
L DP +C+C +LG AY G + K F
Sbjct: 590 ALRADPKDCNCWESLGEAYLSRGGYTTALKSF 621
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 278 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
L AAL+ADPK + W +L AY G + ++ K +A++L P+ M + + VA
Sbjct: 587 LQAALRADPKDCNCWESLGEAYLSRGGYTTALKSFIRASELNPDSMYSVFKVA 639
>gi|340715916|ref|XP_003396453.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 1 [Bombus terrestris]
Length = 1065
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ ++ + + P+ D NL A +GDMEQ+ + +
Sbjct: 111 YSNLGNVYKERGQLQEALENYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAY----- 165
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ Y L C + G L + ++ AK C L A++ P
Sbjct: 166 ------VTALQYNPDLYC----------VRSDLGNLLKALARLDEAKACYLKAIETRPDF 209
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 210 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFL 244
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 125/306 (40%), Gaps = 57/306 (18%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
AV W+ LG + G + +I +A+DPN D AY G++ + A+ F
Sbjct: 210 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLD-------AYINLGNVLKEARIFDR 262
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL-DQASAVNVAKECLLAALKA 284
+ AA + AL L +V+ G AC+ + +++A + A++
Sbjct: 263 AV-------AAYLR--ALNLSPNNAVV------HGNLACVYYEQGLIDLAIDTYRRAIEL 307
Query: 285 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA-VSR----IKDAER 339
P + NLANA G + C A +L P+ + +A + R I++A R
Sbjct: 308 QPNFPDAYCNLANALKEKGQVVEAEDCYNTALRLCPSHADSLNNLANIKREQGYIEEATR 367
Query: 340 ----SQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENE 395
+ E + + A + +AS+L++ + E + + +Q T A A+ N
Sbjct: 368 LYLKALEVFPEFAAAHSNLASVLQQQGKLN-EALMHYKEAIRIQPT---FADAYSNMGNT 423
Query: 396 LSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 455
L +M++ G A +C A++ +P A +NLA+ H+ SG
Sbjct: 424 LKEMQDIQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSG 462
Query: 456 KCLEKV 461
E +
Sbjct: 463 NIPEAI 468
>gi|434384364|ref|YP_007094975.1| cytochrome c biogenesis factor [Chamaesiphon minutus PCC 6605]
gi|428015354|gb|AFY91448.1| cytochrome c biogenesis factor [Chamaesiphon minutus PCC 6605]
Length = 268
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 92/250 (36%), Gaps = 43/250 (17%)
Query: 91 PLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEE 150
P K S E +ILLR A LVQ + +P + L +L P+ E
Sbjct: 15 PKKDPKSLEDTSKILLRQAA--------GLVQFQQYEQAIPRVA----LATQLAPKSHE- 61
Query: 151 ILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAY 210
W LG + +++ + Q I L A+ P + D + LG AY
Sbjct: 62 -----------------AWFFLGSLYVQTQKYQRGIDALLQAKAIKPQDPDILFMLGSAY 104
Query: 211 FQSGDMEQSAKCFQ-DLILKDQNHPAAL-INYAALLLCKYGSVLAGA-----------GA 257
FQ G++ Q+ Q L +K N+ A + A KY +A A
Sbjct: 105 FQKGELPQAIDTLQAGLKIKPDNNSALFDLGNAYYKSNKYADAIAQYQKAVKKDPKFWPA 164
Query: 258 NTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAK 317
G + +N A + A+ DPKAA +A A + G + EKA
Sbjct: 165 INNIGLVNYETGDINGAMQNWQRAIAIDPKAAEPVLAMAVALFAQGKQVEAFTTAEKAIT 224
Query: 318 LEPNCMSTRY 327
L+ + +Y
Sbjct: 225 LDSRYANIQY 234
>gi|86608982|ref|YP_477744.1| TPR repeat-containing protein kinase [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86557524|gb|ABD02481.1| tetratricopeptide repeat/protein kinase domain protein
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 1270
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 13/188 (6%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI-LLRCEADI----ARPELLS------L 120
P++ A+F G + LG L A+ Y +A + + EADI AR ++ + L
Sbjct: 754 PQSGLAYFHRGQVRAALGDGLGAIQDYHQALALGVAVAEADIRRDLARAQIQTGDLQAAL 813
Query: 121 VQIHHAQCLLPESSGDNSLDKEL--EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLK 178
Q++ A L PE EL + E ++ E ++ D + W G+ +
Sbjct: 814 EQLNEAVRLQPERRDLRQERAELCRQLGRWPEAIADYDEVLRQDPQDWTAWLGRGMAHGQ 873
Query: 179 SGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALI 238
G S+I LS +L DP++ + + + G A Q G E + + L+ +D H A +
Sbjct: 874 VGNWDSAIQDLSRVLQQDPDHREALWHRGQALQQLGQTEAALQDLNRLLQRDPQHRMARL 933
Query: 239 NYAALLLC 246
+LLL
Sbjct: 934 ARGSLLLT 941
>gi|410925671|ref|XP_003976303.1| PREDICTED: tetratricopeptide repeat protein 13-like [Takifugu
rubripes]
Length = 824
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
+ ++S++ Q + GL G L+ +I L + + D +LG AY
Sbjct: 233 MEDFQQSLELKKNQPIAMLYKGLTFFHRGLLKEAIETFREALKLKSDFIDAYKSLGQAYR 292
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAG 256
+ GD E + + FQ +L DQNH +L ++L +GS+ G
Sbjct: 293 ELGDFESAMESFQKALLLDQNHIQSL-QLRGMMLYHHGSLQEAIG 336
>gi|389581420|ref|ZP_10171447.1| tetratricopeptide repeat protein [Desulfobacter postgatei 2ac9]
gi|389403055|gb|EIM65277.1| tetratricopeptide repeat protein [Desulfobacter postgatei 2ac9]
Length = 580
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 108/276 (39%), Gaps = 65/276 (23%)
Query: 54 EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKA-------EEILL 106
E++ T L + + +P NA+ +F LG+ Y+ L +P KA+ Y K ++ +L
Sbjct: 301 EDRYQDAVTVLSQIRKALPGNANINFFLGMAYEGLEKPDKAIECYLKVTPDHPQYKKTIL 360
Query: 107 RC---EADIARP-ELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSD 162
D+ R E + ++ HH Q P+++ +I S L Q +
Sbjct: 361 SIAFLYRDMNRTVEAIQFLEQHHRQS----------------PQDI-DITSYLASFYQEN 403
Query: 163 TRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKC 222
+ ++++L L P N D + LG+ +G +S +
Sbjct: 404 NSHDI-----------------AVTMLQRALKEAPQNTDLLFKLGVVLDAAGQRRKSIET 446
Query: 223 FQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAAL 282
+ +I D H +AL NY G A G N +N A + + AL
Sbjct: 447 MKTIIRLDSEHASAL-NYL-------GYTYAEMGIN------------LNQALKLVQRAL 486
Query: 283 KADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 318
+ P+ +I +L Y+ + + LEKA +L
Sbjct: 487 EIRPEDGYIMDSLGWVYFKKQAYDKAIFYLEKAVEL 522
>gi|302878313|ref|YP_003846877.1| hypothetical protein Galf_1083 [Gallionella capsiferriformans ES-2]
gi|302581102|gb|ADL55113.1| Tetratricopeptide TPR_1 repeat-containing protein [Gallionella
capsiferriformans ES-2]
Length = 750
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 40/182 (21%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P + AH+ LGL+ Q LGQ +A +SY +A L+ D A+
Sbjct: 195 PDDFEAHYNLGLILQALGQLDEAAASYRRA----LQLNPDYAQ----------------- 233
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVV-------WNTLGLILLKSGRLQS 184
G N+L L+ L K +E+ S R ++ ++ LG++L R
Sbjct: 234 ---GYNNLGVTLQE------LGKFEEAEASYRRAVLIKPDYLNAYHNLGIVLQCLSRFDE 284
Query: 185 SISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
+ ++ +L ++P+ + NLGI G +++ KCF+ + Q P ++ ++ L+
Sbjct: 285 AEAIHRKILQLNPDYPEAHCNLGIVLLSLGKNDEAVKCFRRAL---QLKPDFVVAHSNLI 341
Query: 245 LC 246
C
Sbjct: 342 FC 343
>gi|196232460|ref|ZP_03131313.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
gi|196223532|gb|EDY18049.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
Length = 792
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 98/250 (39%), Gaps = 46/250 (18%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A AH+ LG + LGQ +A++SY +A EI Q HA
Sbjct: 102 PGFADAHYNLGAVLAELGQMEEALASYRRALEI-----------------QPTHA----- 139
Query: 132 ESSGDNSLDKEL-EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
+N+L L E L+E ++ + ++Q A N LG+ L + G+ +I+
Sbjct: 140 --VAENNLGNILRELRRLDEAIAAYRRAIQLQPAYADAHNNLGVALSEQGKSDEAIAAYG 197
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 250
L + P+ NLG A SG ++ ++ + Q+ PA L +C+
Sbjct: 198 RALELKPDGNAVHANLGNALRASGRYAEAVVAYRRSL---QSSPARLD------ICQ--- 245
Query: 251 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGK 310
G G L + A E ++ +P WA+LAN +
Sbjct: 246 ---------GLGEALVLLGRFDEAGEVFRLIVRCNPDDPEAWASLANVLQRGEKLDDAIA 296
Query: 311 CLEKAAKLEP 320
C +A +L+P
Sbjct: 297 CYRQALRLDP 306
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 74/183 (40%), Gaps = 46/183 (25%)
Query: 178 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL 237
++GRL + S+ +LAV P + + + LG Q G E + + + I D NH AAL
Sbjct: 15 QAGRLVEAESLYRQILAVQPGHAETLHLLGALAQQVGRTEMAIEFMRQAIAADPNHAAAL 74
Query: 238 INYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 297
N AA LL AG GE A + +A + A+
Sbjct: 75 SNLAATLL---------AGGRAGEAAEYAR-------------------RAVEVAPGFAD 106
Query: 298 AYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASI 357
A+Y + G L + ++E S R A+ + +PT + A N + +I
Sbjct: 107 AHY------NLGAVLAELGQMEEALASYRRALEI----------QPTHAV--AENNLGNI 148
Query: 358 LRE 360
LRE
Sbjct: 149 LRE 151
>gi|418750433|ref|ZP_13306719.1| tetratricopeptide repeat protein [Leptospira licerasiae str.
MMD4847]
gi|418758395|ref|ZP_13314577.1| tetratricopeptide repeat protein [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|384114297|gb|EIE00560.1| tetratricopeptide repeat protein [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|404273036|gb|EJZ40356.1| tetratricopeptide repeat protein [Leptospira licerasiae str.
MMD4847]
Length = 638
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 22/186 (11%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTL--GLILLKSGRLQSSISVLSSLLAVDPNNCDCIG 204
+LEE + L+ + Q+ + ++ ++ G L G + SI+ L L +PNN D +
Sbjct: 275 KLEESVKYLELANQAGSNDPELFRSIAEGFEQLNQG--EQSINALQKGLKYNPNNLDLLF 332
Query: 205 NLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGAC 264
L Y+ GD+ + + ++ ++ + P ALL G
Sbjct: 333 QLAETYYNKGDLLAAEETYRRIV---DSTPGDSFTETALLNL---------------GVV 374
Query: 265 LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS 324
LDQ A L L +PK A + NL Y TG+ + + KA+ L+P+ +
Sbjct: 375 LDQMERYGEAITYLNRVLDLNPKNAKAYYNLGLVYKHTGNGTQAIENFRKASYLDPDDIK 434
Query: 325 TRYAVA 330
+ A+
Sbjct: 435 PKEALG 440
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 22/138 (15%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
EE ++ +S D+ LG++L + R +I+ L+ +L ++P N NLG+
Sbjct: 348 EETYRRIVDSTPGDSFTETALLNLGVVLDQMERYGEAITYLNRVLDLNPKNAKAYYNLGL 407
Query: 209 AYFQSGDMEQSAKCFQ-----------------DLILKDQNHPAALINYAALLLCK--YG 249
Y +G+ Q+ + F+ D L+++ + A+ Y+AL K Y
Sbjct: 408 VYKHTGNGTQAIENFRKASYLDPDDIKPKEALGDYYLENKFYREAIEEYSALFKQKEDYY 467
Query: 250 SV---LAGAGANTGEGAC 264
V LA A TGE +
Sbjct: 468 KVALKLAEAYMGTGESSS 485
>gi|196010431|ref|XP_002115080.1| hypothetical protein TRIADDRAFT_58866 [Trichoplax adhaerens]
gi|190582463|gb|EDV22536.1| hypothetical protein TRIADDRAFT_58866 [Trichoplax adhaerens]
Length = 1307
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 36/206 (17%)
Query: 59 SLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC----EADIAR 114
SL+ L + P A ++ +GLMY+ Q +KA+S ++K+ EI L +++A
Sbjct: 1005 SLEIKLSTLDHNHPDIALSYSNMGLMYRHRRQYVKAISMFQKSLEIQLLVYGCNHSNVAN 1064
Query: 115 PELLSLVQIHHAQCLLPESSGD--NSLDKELEPEELEEILSKLKESMQSDTRQ--AVVWN 170
S QI GD N+ K E + E K++ S+ D A+++
Sbjct: 1065 ----SYRQI-----------GDIYNNQKKYKEAISMYEKSLKIQLSVNDDNYPDVAILYF 1109
Query: 171 TLGLILLKSGRLQSSISVLSSLLAV--------DPNNCDCIGNLGIAYFQSGDMEQSAKC 222
++G + GR + +IS+ L + P+ D N+G Y G E++
Sbjct: 1110 SIGNVYCNQGRYEEAISMYDKSLKIMLLVFGENHPDITDLYDNMGSTYRYQGKYEEALSV 1169
Query: 223 FQD-----LILKDQNHPAALINYAAL 243
+Q L++ D +HP +YA +
Sbjct: 1170 YQKSLKIRLLVHDHHHPKVASSYALI 1195
>gi|374999498|ref|YP_004975586.1| hypothetical protein AZOLI_p60001 [Azospirillum lipoferum 4B]
gi|357428469|emb|CBS91426.1| protein of unknown function [Azospirillum lipoferum 4B]
Length = 639
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 18/184 (9%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILL----------RCEADIARPELLSLV 121
P+NAHA LLGL +RLG+P KA+ A +IL A++ R + V
Sbjct: 35 PRNAHAMHLLGLAERRLGRPDKALEMIRSALDILPGMADACYNLGSVLAELGRID--EAV 92
Query: 122 QIHH-AQCLLPE-SSGDNSLDKEL----EPEELEEILSKLKESMQSDTRQAVVWNTLGLI 175
H A L PE N+L L P + + + ++ + + ++ LG+
Sbjct: 93 AAHRRALVLAPELEDAYNALAALLCDRGGPRDWGMAILTFRRVLRLNPHRVAAYHDLGIA 152
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
L ++G L+ + + L++ P+ NLG + GD + + CF +L +
Sbjct: 153 LRQTGALEEAQTSQRLALSLQPDFGGAYANLGNIRIEMGDPDGAMACFHRSLLLEPEQGG 212
Query: 236 ALIN 239
L N
Sbjct: 213 VLYN 216
>gi|47222450|emb|CAG12970.1| unnamed protein product [Tetraodon nigroviridis]
Length = 788
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
+ ++S++ Q + GL G L+ +I L + + D +LG AY
Sbjct: 179 MEDFQQSLELKKNQPIAMLYKGLTFFHRGLLKEAIETFKEALKLKSDFIDAYKSLGQAYR 238
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAG 256
+ GD E + + FQ +L DQNH +L ++L +GS+ G
Sbjct: 239 ELGDFESAMESFQRALLLDQNHIQSL-QLRGMMLYHHGSLQEAIG 282
>gi|384085566|ref|ZP_09996741.1| type IV pilus biogenesis/stability protein PilW [Acidithiobacillus
thiooxidans ATCC 19377]
Length = 289
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 19/157 (12%)
Query: 165 QAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 224
+A ++ +LG L+ G + +I L D + D +G+AY Q G + + F+
Sbjct: 69 KAGIYTSLGTAYLQDGHPRQAIRELQMANQADDSYADAYNVMGLAYEQLGQKTLARQAFE 128
Query: 225 DLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKA 284
+ D +P NY A L+ NTG D A+ K+ L +
Sbjct: 129 QALSLDAKNPEYRNNYGAFLV------------NTG-----DYQQAIVQLKQATADPLYS 171
Query: 285 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
P+ A W NLA AY D ++ L +A L PN
Sbjct: 172 TPQFA--WTNLAQAYAGLKDPVAARNALNRALYLLPN 206
>gi|337286267|ref|YP_004625740.1| hypothetical protein Thein_0899 [Thermodesulfatator indicus DSM
15286]
gi|335359095|gb|AEH44776.1| Tetratricopeptide TPR_1 repeat-containing protein
[Thermodesulfatator indicus DSM 15286]
Length = 561
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 119/294 (40%), Gaps = 51/294 (17%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPE--LLSL-VQIHH--- 125
P A+ ++L+G + G + S KA E ++RC+ P+ LL + +Q+
Sbjct: 32 PAEAYYYYLVGEQFLLQGN----LVSARKALERVVRCDPKALTPQKDLLKIYIQMRQYEK 87
Query: 126 ----AQCLLPESSGDNSLDKEL--------EPEELEEILSKLKESMQSDTRQAVVWNTLG 173
AQ +L ES GD L P E L KL ++ D A + L
Sbjct: 88 AISLAQKILKESPGDKDTLFLLARAYWFQQRPLRAAETLEKL---LEKDPNNAEALSILT 144
Query: 174 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNH 233
I L+ +L+ +I VL L +P N L Y + GD +Q+ K + + + ++
Sbjct: 145 SIYLEQNKLEKAIKVLERLAKKNPENPVIYLELARVYRKKGDFDQARKYYSKALKLEPDN 204
Query: 234 PAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWA 293
L+ Y G L++ A A++ AL +P+ H++
Sbjct: 205 LKILLEY---------------------GDFLEKIGAFKEAQKIYEEALAQNPEQFHLYE 243
Query: 294 NLANAYYLTGDHRSSGKCLEKAAKL---EPNCMSTR--YAVAVSRIKDAERSQE 342
L Y + + + + + K +L P + + + ++R K+AE++ E
Sbjct: 244 ALLKLYVNSNEFEKALELINKLEELVGERPQLLFRKALLLMDLNREKEAEKALE 297
>gi|332707691|ref|ZP_08427719.1| hypothetical protein LYNGBM3L_54490 [Moorea producens 3L]
gi|332353600|gb|EGJ33112.1| hypothetical protein LYNGBM3L_54490 [Moorea producens 3L]
Length = 463
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 68/170 (40%), Gaps = 21/170 (12%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
+ LG+ K G S+I+ L+ +P + D NLG+A G+ E++ + +Q I
Sbjct: 118 YYNLGIAFYKEGAPDSAIAAYRQALSFNPESADIYYNLGLALESQGNQEEAIEHYQATIR 177
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
D ++ A N +L+ + DQ + A L A++ PK
Sbjct: 178 LDPDYGKAYYNMGLILVEQ------------------DQ---IGPATTALRQAVRTQPKL 216
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAE 338
L G+ ++ + +A K++P +Y +AV + E
Sbjct: 217 VKAHYQLGLLLVEQGEKSAAEESFREAVKVDPKLAPAQYQLAVILFEKGE 266
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 69/171 (40%), Gaps = 23/171 (13%)
Query: 54 EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIA 113
++++ T L R PK AH+ LGL+ G+ A S+ +A ++ + +A
Sbjct: 196 QDQIGPATTALRQAVRTQPKLVKAHYQLGLLLVEQGEKSAAEESFREA----VKVDPKLA 251
Query: 114 RPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLG 173
P L I + L E+ L ELEPE ++ + LG
Sbjct: 252 -PAQYQLAVILFEKGELAEAITRFRLVTELEPENVD------------------AYRQLG 292
Query: 174 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 224
L +G +++ L + +DP + NLG+A Q E++ +Q
Sbjct: 293 AALTANGEYAEAVTTLKLAVQLDPYHALTHYNLGVALQQQEQYEEAMAEYQ 343
>gi|186685148|ref|YP_001868344.1| hypothetical protein Npun_F5064 [Nostoc punctiforme PCC 73102]
gi|186467600|gb|ACC83401.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
73102]
Length = 307
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 74/182 (40%), Gaps = 21/182 (11%)
Query: 157 ESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 216
E +S+ + A+ W GL +++G+++ +I+ +DP NLG+AY Q+G +
Sbjct: 37 ELAKSNGKTAIDWLNQGLQAIQAGKVKDAIAAFKQAAKLDPTLAPAYYNLGLAYRQTGQL 96
Query: 217 EQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKE 276
+ SA F D A A AN G GA L+ + + +A +
Sbjct: 97 QPSADAFYRATQAD-------------------PKFAPAFANLG-GALLE-GNNLQLAND 135
Query: 277 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKD 336
L AL+ DPK N GD + ++A + N Y + + ++
Sbjct: 136 YLQRALELDPKLGFAHYNFGLVREQQGDCEKAIASFKQAIEYSKNAPEPPYHIGMCYLQQ 195
Query: 337 AE 338
+
Sbjct: 196 GK 197
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 70/185 (37%), Gaps = 21/185 (11%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+L+ + Q+D + A + LG LL+ LQ + L L +DP N
Sbjct: 95 QLQPSADAFYRATQADPKFAPAFANLGGALLEGNNLQLANDYLQRALELDPKLGFAHYNF 154
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G+ Q GD E++ F+ I +N P + G C
Sbjct: 155 GLVREQQGDCEKAIASFKQAIEYSKNAPEPPYHI---------------------GMCYL 193
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
Q ++ A++ A+K +PK + NL + ++ + + + K+A+ N +
Sbjct: 194 QQGKLDRARDAFNQAVKINPKYPEAYYNLGSIWFQQNKLQEALEAFRKSAEANSNYPNAY 253
Query: 327 YAVAV 331
Y +
Sbjct: 254 YGAGL 258
>gi|288941664|ref|YP_003443904.1| TPR repeat-containing protein [Allochromatium vinosum DSM 180]
gi|288897036|gb|ADC62872.1| Tetratricopeptide TPR_2 repeat protein [Allochromatium vinosum DSM
180]
Length = 666
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
A W LG IL + R Q ++SVL + L + P + +C+ LG A G ME++ +
Sbjct: 41 AFGWKILGAILTTTQRHQEAVSVLKTALKLSPEDAECLNTLGAALEDEGRMEEAGVLYAR 100
Query: 226 LILKDQNHPAALINYAALL 244
+ AA N A LL
Sbjct: 101 AARQAPGFVAAFYNLAKLL 119
>gi|291001045|ref|XP_002683089.1| predicted protein [Naegleria gruberi]
gi|284096718|gb|EFC50345.1| predicted protein [Naegleria gruberi]
Length = 455
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/157 (19%), Positives = 61/157 (38%), Gaps = 21/157 (13%)
Query: 164 RQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 223
R + + LG I R + +I + L P N + + +G+ Y + GD ++
Sbjct: 190 RHDITFIELGKIFTIQERYEEAIDIYLEALDFSPENPELLSTVGLLYLRVGDNLKAFDYL 249
Query: 224 QDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALK 283
+ + D +P ++ G+ + + VA A K
Sbjct: 250 GNSLSHDPTNPKTIL---------------------ATGSIIQDHGEMEVALSKYRIAAK 288
Query: 284 ADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
+P +A +W N+ ++ D+ +S CL++A L P
Sbjct: 289 KNPNSAQLWNNIGMCFFGKQDYVTSIACLKRALYLAP 325
>gi|443324900|ref|ZP_21053622.1| tetratricopeptide repeat protein,sulfotransferase family protein
[Xenococcus sp. PCC 7305]
gi|442795502|gb|ELS04867.1| tetratricopeptide repeat protein,sulfotransferase family protein
[Xenococcus sp. PCC 7305]
Length = 789
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 73/166 (43%), Gaps = 15/166 (9%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+L+E +S K+ ++ + R ++ +G +L + +L+ +I + ++PN C L
Sbjct: 25 KLDEAISTYKQGIKVEARSHECYHFIGEVLAQKDQLEQAIKSYEKSIKINPNYCWSYHCL 84
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVL---------AGAGA 257
G+ YF G +++ A + L L+ + A + L L + G++ G
Sbjct: 85 GLVYFWQGQLDK-AIAYSRLSLEKAPNIAVFYYHLGLYLKRQGNLYEAIYCCQKAIGLDP 143
Query: 258 NTGE-----GACLDQASAVNVAKECLLAALKADPKAAHIWANLANA 298
N + G CL + + E + ALK D ++ NLA+
Sbjct: 144 NLAQAHHILGQCLAKKKQWKQSYEAYIKALKLDSNLPNLRRNLADV 189
>gi|427737813|ref|YP_007057357.1| glycosyl transferase family protein [Rivularia sp. PCC 7116]
gi|427372854|gb|AFY56810.1| glycosyl transferase [Rivularia sp. PCC 7116]
Length = 399
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 76/179 (42%), Gaps = 22/179 (12%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIG-- 204
+LE ++E ++ A + + LG + + G++ SI +LS ++V+ N D +
Sbjct: 182 KLERAKVGMEEFFANNPDDAYICSKLGALYIDLGKITESIQLLSKGVSVESENSDILYEL 241
Query: 205 --NLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 262
+LGIAY + + +Q+ +Q AA L Y + GA N G
Sbjct: 242 YYHLGIAYSRLKNYQQAIAHYQ----------------AATKLPIYPILKLGAYNNLG-- 283
Query: 263 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
+ L + +N AK+ LK DP + NL Y G + + KA L PN
Sbjct: 284 SLLKEKGDLNGAKKAYETTLKIDPSFISGYYNLGMTYKAMGLFKDAIAAYVKAIDLNPN 342
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 67/162 (41%), Gaps = 23/162 (14%)
Query: 78 HFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDN 137
++ LG+ Y RL +A++ Y+ A ++ + +L L ++ LL E N
Sbjct: 242 YYHLGIAYSRLKNYQQAIAHYQAATKLPIY--------PILKLGAYNNLGSLLKEKGDLN 293
Query: 138 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 197
K E +++ D + LG+ G + +I+ + ++P
Sbjct: 294 GAKKAYET------------TLKIDPSFISGYYNLGMTYKAMGLFKDAIAAYVKAIDLNP 341
Query: 198 NNCDCIGNLGIAYFQSGDMEQSAKCFQ---DLILKDQNHPAA 236
N NLG+ ++G ++ S F+ DL +K NH AA
Sbjct: 342 NYAQAYQNLGVVLLKAGYVDDSLTAFKEAIDLHVKQNNHFAA 383
>gi|108757730|ref|YP_632805.1| TPR domain-containing protein [Myxococcus xanthus DK 1622]
gi|108461610|gb|ABF86795.1| TPR domain protein [Myxococcus xanthus DK 1622]
Length = 624
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 20/156 (12%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
A +++ L L + GR + ++++L +A P + D + LG A+ + GD+ + +
Sbjct: 427 AALYDALAATLHRQGRGREALTLLRGAVARFPRDEDLLYVLGAAHERQGDVTGALARMRA 486
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 285
++ +H AAL N+ G +LA AG N E A+ + AL+
Sbjct: 487 VLAVSPDHAAAL-NF-------LGYLLAQAGQNLDE------------AERRVRRALELR 526
Query: 286 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
P +L Y+ GD+ + LE+A+ L P+
Sbjct: 527 PDTGAYLDSLGWVYFRRGDYARAVDALERASTLAPD 562
>gi|448747260|ref|ZP_21728921.1| Tetratricopeptide-like helical [Halomonas titanicae BH1]
gi|445565172|gb|ELY21284.1| Tetratricopeptide-like helical [Halomonas titanicae BH1]
Length = 437
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 77/204 (37%), Gaps = 15/204 (7%)
Query: 131 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
P S N+ + LE + + L K KE W LG L + G+ ++ L
Sbjct: 6 PYRSSSNARQRNLEVKGTAQALKKAKERTVQQPANLAAWKQLGAELSEVGQFDEALIALE 65
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA--LINYAALLLCKY 248
A+ ++ + + G Q+G+ EQ+ D I + N+ A I Y ++
Sbjct: 66 RASALVSDDAETLALKGRITHQAGNPEQALIFLHDAIKLNPNYAKAQHYIGYIYYTQARF 125
Query: 249 GSVLAGAGA------------NTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 296
L A NT G L QA N AK+ L A + PK W NL
Sbjct: 126 NEALQHAEIACELVPDDVDMLNT-LGNTLMQAFEYNRAKDALEKAARLAPKNYLSWNNLG 184
Query: 297 NAYYLTGDHRSSGKCLEKAAKLEP 320
N Y GD + +A ++ P
Sbjct: 185 NVYNAIGDLDKGLESYWQAHRVNP 208
>gi|302340547|ref|YP_003805753.1| hypothetical protein Spirs_4077 [Spirochaeta smaragdinae DSM 11293]
gi|301637732|gb|ADK83159.1| Tetratricopeptide TPR_2 repeat protein [Spirochaeta smaragdinae DSM
11293]
Length = 820
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 100/272 (36%), Gaps = 70/272 (25%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P + A+ LG +Y+ Q +A+++YE+ + D P L + I
Sbjct: 136 PSFSFAYNNLGTIYESQDQTDRAITTYEEG------LQYDTNHPTLRYNLGISL------ 183
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
ES GD E + + K S++S N LG+ L K+G+L+ + +
Sbjct: 184 ESQGD-----------YEAAIREYKRSLKSRPGWPSGINNLGVALQKAGKLEEAERMFRD 232
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL-------- 243
L+ + P + NLG + G E++ +C++ + D + A +N ++L
Sbjct: 233 LVRIAPGSVKGNNNLGTVLAEQGKAEEAERCYRKALSLDAGYGKAALNLSSLKRETESPE 292
Query: 244 ------------------LLCKYGSVLAGAG----------------ANTGEGACL---- 265
L ++ AG + GE CL
Sbjct: 293 EALKSIQALAAEFPDDVALQLRFVQAYIDAGKVHKAGVILAPLLKNDPDNGEAHCLMGRI 352
Query: 266 -DQASAVNVAKECLLAALKADPKAAHIWANLA 296
Q +A++ ALK DP A W +LA
Sbjct: 353 RRQQGKKELAEQHFKLALKKDPPAIEAWLHLA 384
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/176 (19%), Positives = 62/176 (35%), Gaps = 23/176 (13%)
Query: 157 ESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 216
ES+ D ++ + G I +K GR + +L+ P+N + + NLG+A +GDM
Sbjct: 30 ESLYPDNLSVLILS--GTIAMKRGRFAEAAGTFERILSFAPDNVEALNNLGVALRSTGDM 87
Query: 217 EQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKE 276
+ + + D N A CL + A
Sbjct: 88 DSALTYLKRAYETDPQRADVQYNIA---------------------NCLKSKRIYDEAIR 126
Query: 277 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 332
A+ +P + + NL Y + E+ + + N + RY + +S
Sbjct: 127 YYRNAISLNPSFSFAYNNLGTIYESQDQTDRAITTYEEGLQYDTNHPTLRYNLGIS 182
>gi|220930570|ref|YP_002507479.1| hypothetical protein Ccel_3209 [Clostridium cellulolyticum H10]
gi|220000898|gb|ACL77499.1| Tetratricopeptide TPR_2 repeat protein [Clostridium cellulolyticum
H10]
Length = 234
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 89/196 (45%), Gaps = 27/196 (13%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV----LSSLLAVDPNNCDCI- 203
+E ++ L+++ ++++ +AVV T G +LLK G L S+ + L+S + N+ +
Sbjct: 25 QEAINLLEKAYKTESAKAVVVTTYGYLLLKEGHLDESLKIFKEQLNSTSKISDNDLYSLK 84
Query: 204 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGA 263
N +A +++G+++++ ++++ N+ + + YGS+ G
Sbjct: 85 ANYALALWKNGELDRAIAIYEEIF---PNYKSTNV---------YGSL----------GY 122
Query: 264 CLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
V A E L A++ + A I NL YY+ G++ + + +K L P
Sbjct: 123 LYILKGNVEKALEFNLEAMEYNNTGAVILDNLGQTYYMMGEYTKAEEIFKKLMALGPKFP 182
Query: 324 STRYAVAVSRIKDAER 339
Y A+ K E+
Sbjct: 183 EAYYDYALVLEKLGEK 198
>gi|186687238|ref|YP_001870381.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
gi|186469541|gb|ACC85340.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
73102]
Length = 254
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 27/185 (14%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
L+ L+ ++ +E++ + A V NT+G+I + + + +I + + L+++PN +
Sbjct: 20 LKSGNLDAVIECFREALLLNPNFAEVHNTIGMIQFQIEKYEGAIQLFDNALSMNPNFAEA 79
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDL---ILKDQNHPAALINYAALLLCKYGSVLAGAGANT 259
N G+A + + K +D I + N A IN A Y ++ T
Sbjct: 80 YNNRGLARSKICHKSEFPKVIEDYTKAIALNPNLVQAYINRAD----TYKNL-------T 128
Query: 260 GEG--ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAK 317
G+ A LD + +++ CL A + N AN Y+L+G+ S LEK
Sbjct: 129 GDNPAAILDYSQVISLDPNCLSA-----------YINRANIYFLSGELEKSLSDLEKVLS 177
Query: 318 LEPNC 322
L+ +C
Sbjct: 178 LDTDC 182
>gi|427716370|ref|YP_007064364.1| hypothetical protein Cal7507_1054 [Calothrix sp. PCC 7507]
gi|427348806|gb|AFY31530.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 7507]
Length = 517
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 92/235 (39%), Gaps = 33/235 (14%)
Query: 124 HHAQCLLPES---SGDNSLDKELEPE-----ELEEILSKLKESMQSDTRQAVVWNTLGLI 175
+H Q + P S +G+N LD++L E + + L+ ++++ A ++ GL
Sbjct: 207 YHKQSIQPLSVIENGNNLLDEKLGDECFARGDFDAALTNYNKALKLHPDDADIYYKRGLA 266
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
+ +I+ + + ++PNN G++++Q GD E + + D N
Sbjct: 267 RHEISDYAGAIADYNQAIKINPNNAKAYNKRGLSHYQLGDYEAA--------IDDYNQAI 318
Query: 236 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVN-----------------VAKECL 278
+ + A+ + G N G QA +N ++
Sbjct: 319 RINPHVAVNFKNRADARSQLGDNQGAIEDYTQAIKINPNYAIVDTNGSISRYLLTNQQKF 378
Query: 279 LAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSR 333
A+K +P A + N A+A Y GD+ + + K+ PN + Y +R
Sbjct: 379 TKAIKLNPHDAVAYKNRADARYDLGDYEGAIADYIQVIKINPNYIDAYYNCGNAR 433
>gi|359464250|ref|ZP_09252813.1| TPR domain-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 1345
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 71/175 (40%), Gaps = 21/175 (12%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
+ EE L+ L ++++ D A+ + G+ R + +I+ L +A+D G
Sbjct: 700 DRYEETLTALNQAIEIDPNMAIAYTNRGVTYSFLKRPKEAIADLKKAIALDSQYISAYGG 759
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
LG+ Y G +++ F I D +P INY +G+G
Sbjct: 760 LGMLYHSQGRYQEALAQFNQGIAIDPKNP---INY------------------SGQGFVY 798
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
A A++ +P +A+ + + AN Y T ++ + L KA +L P
Sbjct: 799 FAQKQYQAAIAAHTQAIELEPDSANDYFSRANVYITTQQYQPAIADLTKAIQLAP 853
>gi|333985572|ref|YP_004514782.1| type 11 methyltransferase [Methylomonas methanica MC09]
gi|333809613|gb|AEG02283.1| Methyltransferase type 11 [Methylomonas methanica MC09]
Length = 445
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 72/172 (41%), Gaps = 24/172 (13%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
EL++ + ++ R + LGL++ + G Q +I ++ +A P D NL
Sbjct: 29 ELDDAEELYRTILEQHPRFPEALHFLGLLMHQKGDNQQAIGLIEQAIAEAPAYSDAHNNL 88
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G + + D E++A+ + + + + AA N+ G L
Sbjct: 89 GNIFNRLEDFEKAAQSYSQALDLNPENVAAFNNF---------------------GVVLS 127
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 318
Q + ++ A E A+ P+ A + NL NAY G+ GKC+E K+
Sbjct: 128 QLARIDDAIEAFTKAIALMPENAEFYRNLGNAYKKQGEF---GKCIEAYRKV 176
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E+ E+ +++ + +N G++L + R+ +I + +A+ P N + N
Sbjct: 96 EDFEKAAQSYSQALDLNPENVAAFNNFGVVLSQLARIDDAIEAFTKAIALMPENAEFYRN 155
Query: 206 LGIAYFQSGDMEQSAKCFQDLI-LKDQN 232
LG AY + G+ + + ++ +I LK N
Sbjct: 156 LGNAYKKQGEFGKCIEAYRKVIGLKPYN 183
>gi|386021254|ref|YP_005939278.1| cytochrome c-type biogenesis protein [Pseudomonas stutzeri DSM
4166]
gi|327481226|gb|AEA84536.1| cytochrome c-type biogenesis protein [Pseudomonas stutzeri DSM
4166]
Length = 406
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 81/197 (41%), Gaps = 23/197 (11%)
Query: 6 DVAEVEGKKINKLGKCRSRISSKMDSALEFGVD---ADGDQSGLGTSSSSREEKVSSLKT 62
D + KI KLG+ I++ + + +G+ D+ + S + V +
Sbjct: 78 DTENSDSPKIAKLGRSVPLIAAVLVPLVGYGLYMHWGASDKVQMARQFSEQPRTVEEMTA 137
Query: 63 GLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ 122
L ++ P +A A + LG Y +P A ++ + E+ R +PELL Q
Sbjct: 138 HLEQAVKEQPDSAEAWYFLGRTYMNQERPSDAAKAFARVVELAGR------QPELLG--Q 189
Query: 123 IHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRL 182
AQ +GD ++L+ + E++Q+D ++ LG+ + GR
Sbjct: 190 WAQAQYF----AGDRQWSEQLQ--------ALTDEALQADPQELTSLGLLGIAAYEEGRY 237
Query: 183 QSSISVLSSLLAVDPNN 199
Q ++ L+A P N
Sbjct: 238 QDAVRFWEQLVAALPEN 254
>gi|291613071|ref|YP_003523228.1| hypothetical protein Slit_0601 [Sideroxydans lithotrophicus ES-1]
gi|291583183|gb|ADE10841.1| TPR repeat-containing protein [Sideroxydans lithotrophicus ES-1]
Length = 698
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 19/180 (10%)
Query: 81 LGLMYQRLGQPLKAVSSYEKAEEI----------LLRCEADIARPELLSLVQIHHAQCLL 130
LG++ + +GQP++A + Y +A EI L + RP + + V HA L
Sbjct: 121 LGIIRKAMGQPVEAEACYRRAIEIRPNYADAYNNLGSVLQYLGRP-VEAEVSYKHAIQLE 179
Query: 131 PES--SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 188
P S N + E E + L+ ++Q A +N LG L GRLQ + S
Sbjct: 180 PARAESYSNLGNTLQELGRYHEAEASLRRALQLQPDHAQAYNNLGGTLKHMGRLQEAESC 239
Query: 189 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD-LILKDQNHPA-----ALINYAA 242
L + P + NLG G + ++ +C+++ L + + PA ++NYA+
Sbjct: 240 YRRALHISPEKAEVHSNLGATLMDMGRLHEAEQCYREALRINPEYFPAHSNLLFMMNYAS 299
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 62/314 (19%), Positives = 115/314 (36%), Gaps = 41/314 (13%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
KE + + W LG++ + GR ++ + + + + PN+ + GNLGI G
Sbjct: 3 KEMTARFPQYGIGWKMLGVLFNQMGRNAEALGPMRNAITLLPNDAEAHGNLGIILNGLGM 62
Query: 216 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 275
++++A ++ I + N N G++ G C
Sbjct: 63 LDEAAASYRRAIQLNPNVAGWYFN--------LGNIFMAQGKWQKSEDCY---------- 104
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 335
+C+L LKAD ++ NL G + C +A ++ PN YA A + +
Sbjct: 105 QCVL-MLKAD--FPEVYNNLGIIRKAMGQPVEAEACYRRAIEIRPN-----YADAYNNLG 156
Query: 336 DAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEEN- 394
L + G + + + +Q+EP A ++ + T E+ E E +
Sbjct: 157 SV---------LQYLGRPVEAEVSYKHAIQLEPARA-ESYSNLGNTLQELGRYHEAEASL 206
Query: 395 ----ELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGD 450
+L A L + A+ C AL P+ A + +NL G
Sbjct: 207 RRALQLQPDHAQAYNNLGGTLKHMGRLQEAESCYRRALHISPEKAEVHSNLGATLMDMGR 266
Query: 451 HRSSGKCLEKVLMV 464
+ +C + L +
Sbjct: 267 LHEAEQCYREALRI 280
>gi|335429748|ref|ZP_08556646.1| TPR repeat-containing protein [Haloplasma contractile SSD-17B]
gi|334889758|gb|EGM28043.1| TPR repeat-containing protein [Haloplasma contractile SSD-17B]
Length = 301
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 24/164 (14%)
Query: 77 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGD 136
AHF L +Y +G+ KA + YEK ++ C++ ++L QI+ E +G+
Sbjct: 109 AHFFLANVYDEIGETSKAKAHYEKTIDL---CKSYFWA--YMNLGQIY-------ERNGE 156
Query: 137 NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVD 196
N E+ L +++ D +++ LG++ K+G + SIS L++
Sbjct: 157 N-----------EKALLLFEKAESIDPTNHLIYFNLGVVYKKTGDFKKSISFYKKSLSLS 205
Query: 197 PNNCDCIGNLGIAYF-QSGDMEQSAKCFQDLILKDQNHPAALIN 239
NL + Y Q D+ QS + IL+ NH L N
Sbjct: 206 KEYPYTYLNLALLYKDQYNDLNQSLDIYNKGILQHPNHEVLLYN 249
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 41/83 (49%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
+ LG I ++G + ++ + ++DP N NLG+ Y ++GD ++S ++ +
Sbjct: 144 YMNLGQIYERNGENEKALLLFEKAESIDPTNHLIYFNLGVVYKKTGDFKKSISFYKKSLS 203
Query: 229 KDQNHPAALINYAALLLCKYGSV 251
+ +P +N A L +Y +
Sbjct: 204 LSKEYPYTYLNLALLYKDQYNDL 226
>gi|27804844|gb|AAO22883.1| hypothetical protein [Myxococcus xanthus]
Length = 310
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 20/156 (12%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
A +++ L L + GR + ++++L +A P + D + LG A+ + GD+ + +
Sbjct: 113 AALYDALAATLHRQGRGREALTLLRGAVARFPRDEDLLYVLGAAHERQGDVTGALARMRA 172
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 285
++ +H AAL N+ G +LA AG N E A+ + AL+
Sbjct: 173 VLAVSPDHAAAL-NF-------LGYLLAQAGQNLDE------------AERRVRRALELR 212
Query: 286 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
P +L Y+ GD+ + LE+A+ L P+
Sbjct: 213 PDTGAYLDSLGWVYFRRGDYARAVDALERASTLAPD 248
>gi|298246522|ref|ZP_06970328.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
racemifer DSM 44963]
gi|297554003|gb|EFH87868.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
racemifer DSM 44963]
Length = 747
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 69/173 (39%), Gaps = 21/173 (12%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
E+ L+ ++ D R A+ W+ LIL + + + ++ L+ +PN+ + G+
Sbjct: 460 EQALNAFDTALSFDPRMALAWSNKSLILRQMRKYEEALQASEQALSYEPNSALNWNSKGL 519
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
+ G + ++ + +Q+ + +D AL G G L
Sbjct: 520 ILLEMGRLREAYQAYQEALKRDSRFAPALY---------------------GMGNVLYAQ 558
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
A + AL+ DP +W G++R S + E+A +++P+
Sbjct: 559 QKFKSALDNYDRALQFDPNYVKVWERRGQLLQELGNYRRSLESFERATQIDPS 611
>gi|357634577|ref|ZP_09132455.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
sp. FW1012B]
gi|357583131|gb|EHJ48464.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
sp. FW1012B]
Length = 206
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
L + + L++ Q + A W LG + + + + +I+ L +DP D + + G
Sbjct: 67 LADRVKALEKQTQLEPANAAAWTELGNLYFDTEQPEKAITAYEKALTLDPKQPDVLTDQG 126
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
+ Y Q G +++ +CF I + H A N + +L
Sbjct: 127 VMYRQVGKFDKALECFNKAIAINPGHIIAQFNKSVVL 163
>gi|109474510|ref|XP_001075561.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like
[Rattus norvegicus]
Length = 942
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 139/338 (41%), Gaps = 54/338 (15%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E+ EE + LKES++ A +++L +L + R + + V + + P++ D N
Sbjct: 622 EKTEEAIVLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDVYQAGIKNCPDSSDLHNN 681
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
+ SG E++ +Q I +H A++N G + G N+
Sbjct: 682 YAVFLVDSGFPEKAVAHYQQAIQLSPSHHVAVVNL--------GRLHRSLGENS------ 727
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+A+E AL+ + A + + L YY TG H+ + + +A L+P+
Sbjct: 728 -------MAEEWYRRALQVA-RTAEVLSPLGALYYNTGRHKEALEVYREAVSLQPSQRDL 779
Query: 326 RYAVA-----VSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAV-- 378
R A+A + + K+AE+ + S + +P +E + +A+
Sbjct: 780 RLALAQVLAVMGQTKEAEK--------------ITSHIVSEEPRCLE---CYRLLSAIYS 822
Query: 379 QKTHHEVAAAFETEENELS-KMEECAGAGESAF-----LDQASAVNVAKECLLAALKADP 432
++ HHE A E E L K ++ E F L + + ++ A E AA+ DP
Sbjct: 823 KQEHHE--KALEAIEKALQLKPKDPKVISELFFTKGNQLREQNLLDKAFESYEAAVTLDP 880
Query: 433 KAAHIWANLANAYYLTGDHRSSGKCLEKVLMVYCSSNL 470
A W N+ ++ G + + E+ L + S L
Sbjct: 881 DQAQAWMNMGGIRHIQGSYVPARVYYERALRLVPESKL 918
>gi|340503702|gb|EGR30238.1| hypothetical protein IMG5_137130 [Ichthyophthirius multifiliis]
Length = 489
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 18/187 (9%)
Query: 77 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGD 136
H L +Y RL QP+ A+ Y+K L + +I +L + +I+ L +SS
Sbjct: 247 THLQLAKVYIRLNQPITAIECYKKG---LQKHPQEIQF--ILGIARIYDQLVLSLDSSNM 301
Query: 137 NSLDKEL-------EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVL 189
S+ + +PE + +L +Q QA +WN L L L G+ S
Sbjct: 302 ESVAQLAANQFYIDQPEVSTKFYQRL---LQLGINQAELWNNLALCLFYDGQYDLFYSCF 358
Query: 190 SS--LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK 247
+LA + N D N+ + G+ + +C + I D +HP A N +L K
Sbjct: 359 EKALMLADESNKADIWYNISHVFINLGETGMAYQCLKIAICFDPHHPEAY-NNLGILEIK 417
Query: 248 YGSVLAG 254
G++ G
Sbjct: 418 KGNIEKG 424
>gi|449513887|ref|XP_004176382.1| PREDICTED: LOW QUALITY PROTEIN: tetratricopeptide repeat protein 37
[Taeniopygia guttata]
Length = 1566
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL--GLILLKSGRLQSSISVL 189
E SG ++ +E +++ LS L E + W L GL L++GR ++S L
Sbjct: 526 EESGTAAVSLSVELGDMDTALSILNEVTEKARPGTAKWAWLHRGLYYLRTGRPSQAVSDL 585
Query: 190 SSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 224
+ L DP + +C +LG AYF G + K F+
Sbjct: 586 QAALRADPKDSNCWESLGEAYFNRGSYSTALKSFR 620
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 71/139 (51%), Gaps = 21/139 (15%)
Query: 88 LGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEE 147
LG+PLK +S + + C+ L ++ IH A+ ++G ++ K E
Sbjct: 768 LGRPLKLISF------LSIGCD--------LEIIYIHQAEHF---TAGGHTRLKI--SEL 808
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIG--N 205
LE+ L LK++++ D++ + WN LG++ S +++ S + +V + + N
Sbjct: 809 LEKSLQCLKKAVRLDSKNHLYWNALGVVASCSAIGNYALAQHSFIKSVQAEQINVVAWTN 868
Query: 206 LGIAYFQSGDMEQSAKCFQ 224
LG+ Y +G++EQ+ + F+
Sbjct: 869 LGVLYLATGNIEQAHEAFK 887
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 278 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
L AAL+ADPK ++ W +L AY+ G + ++ K KA++L P + Y A
Sbjct: 585 LQAALRADPKDSNCWESLGEAYFNRGSYSTALKSFRKASELNPGLTYSIYRAA 637
>gi|456860929|gb|EMF79639.1| tetratricopeptide repeat protein [Leptospira weilii serovar Topaz
str. LT2116]
Length = 1197
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/169 (18%), Positives = 78/169 (46%), Gaps = 23/169 (13%)
Query: 53 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 112
R+ ++ + G + K P + ++H+ +G+++ + + ++ S++++ +LL +
Sbjct: 688 RKGEIDKAEAGFKEILAKKPDSYYSHYQMGIIHLQRKEYEASIDSFDRS--LLLNIDFVA 745
Query: 113 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 172
AR + + ++H SG+ L KE + + +MQ D+ + +
Sbjct: 746 AR--IGKGISMYH--------SGNKKLAKE-----------EFEIAMQQDSANELAPYNI 784
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 221
G+IL +I++ ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAITIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|39998281|ref|NP_954232.1| hypothetical protein GSU3191 [Geobacter sulfurreducens PCA]
gi|409913632|ref|YP_006892097.1| hypothetical protein KN400_3128 [Geobacter sulfurreducens KN400]
gi|39985227|gb|AAR36582.1| TPR domain protein [Geobacter sulfurreducens PCA]
gi|298507217|gb|ADI85940.1| TPR domain protein [Geobacter sulfurreducens KN400]
Length = 638
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 119/302 (39%), Gaps = 47/302 (15%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 128
R P NA H+ LG++Y+R G +AV Y++A + L E AR L + + +
Sbjct: 327 RVKPGNAANHYNLGIIYERKGLIDEAVVEYKQA--VRLSAEHGDARRRLADIYTLRGSH- 383
Query: 129 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 188
P+ +E+ +E ++ V+ L + S + +I+
Sbjct: 384 ----------------PQAIEQY----RELLKRGDSNPVLHLKLARGFMSSKNTKDAIAS 423
Query: 189 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDL--ILKDQNHPAALINYAALLLC 246
+ L +DP+N + L Y + M+ ++K ++++ I KD ++ +
Sbjct: 424 YNEALKLDPDNLEAHRELAAVYRKLNQMDDASKQYREVLRIKKDDAEARNILTAIYVKEK 483
Query: 247 KYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWAN------------ 294
KY ++ EG L A++ K L+ + D +A +
Sbjct: 484 KYDELV----PLLQEGVELAPNDAMSHYKLGLIHEFRKDYDSAEVSYRKATELKDDHAKA 539
Query: 295 ---LANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAG 351
L Y TG + + LE A K +P T AV +S IKD E S EP + G
Sbjct: 540 LNALGRIYLKTGKLTEAKEALEAAKKADPGMEET--AVLLSNIKD-ELSPEPKRYVKKKG 596
Query: 352 NE 353
+
Sbjct: 597 TK 598
>gi|144898330|emb|CAM75194.1| methyltransferase [Magnetospirillum gryphiswaldense MSR-1]
Length = 543
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 101/275 (36%), Gaps = 38/275 (13%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P AH+LLGL+ GQ +A L + + I Q L
Sbjct: 40 PSFGGAHYLLGLLALDQGQGKRAAG-------------------HLATAIAITPGQSALH 80
Query: 132 ESSGDNSLDKELE-PEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
+ G + LE E+ E + + A LG +L + GR+ +IS
Sbjct: 81 LAMG-----RALEMGNEVAEASLHFRTVLNIHPHHAEAHARLGHLLRQQGRVDEAISHCR 135
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL-----L 245
+ DP + + LG Q GD ++A+C + + P AL N+ L L
Sbjct: 136 HAVTADPGHAEAWNTLGALLQQQGDPREAAQCLRRALQLRPVWPTALNNFGLALKECGNL 195
Query: 246 CKYGSVLAG--------AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 297
+ ++L G AG T + L ++ A+E A+K P+ + W L
Sbjct: 196 AEAAAILEGAVDIRPDHAGTRTNLASVLRAMGQLDRAREQAEKAVKLAPRDSDSWVELGL 255
Query: 298 AYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 332
G + ++A + P+ + + +A S
Sbjct: 256 IRQAQGHEDGAASAFDRATAIAPDQIKPWFCLAES 290
>gi|40063060|gb|AAR37916.1| TPR domain protein [uncultured marine bacterium 560]
Length = 764
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 92/254 (36%), Gaps = 46/254 (18%)
Query: 75 AHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESS 134
A AH LG+ Q LGQ AV YE+A I RP+ +
Sbjct: 73 ADAHNNLGVTLQELGQLEAAVKHYEEALAI---------RPDY---------------AE 108
Query: 135 GDNSLDKEL-EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLL 193
N+ L E +LE + +E++ A N LG+ L + G+L +++ +
Sbjct: 109 AHNNFGVTLQELGQLEAAVKHYEEALAIRPDYAEAHNNLGITLKELGQLDAAVESYKKTI 168
Query: 194 AVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLA 253
+ PN + NLGI + G ++ + K ++ + N
Sbjct: 169 VIKPNFAEAHNNLGITLKELGQLDTAVKSYEKALAIKPNF-------------------- 208
Query: 254 GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
A A+ G ++ A + AL P A + NL NA G ++ C E
Sbjct: 209 -AEAHNNLGNVFKDLGQLDTAVKSYEKALAIRPDYAEVHNNLGNALKELGQLDAAFNCYE 267
Query: 314 KAAKLEPNCMSTRY 327
K ++P Y
Sbjct: 268 KTLAIKPEFAEANY 281
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 25/154 (16%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A AH G+ Q LGQ AV YE+A I RP+
Sbjct: 104 PDYAEAHNNFGVTLQELGQLEAAVKHYEEALAI---------RPDY-------------- 140
Query: 132 ESSGDNSLDKEL-EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
+ N+L L E +L+ + K+++ A N LG+ L + G+L +++
Sbjct: 141 -AEAHNNLGITLKELGQLDAAVESYKKTIVIKPNFAEAHNNLGITLKELGQLDTAVKSYE 199
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 224
LA+ PN + NLG + G ++ + K ++
Sbjct: 200 KALAIKPNFAEAHNNLGNVFKDLGQLDTAVKSYE 233
>gi|209522608|ref|ZP_03271173.1| TPR repeat-containing protein [Burkholderia sp. H160]
gi|209496956|gb|EDZ97246.1| TPR repeat-containing protein [Burkholderia sp. H160]
Length = 287
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 73/178 (41%), Gaps = 25/178 (14%)
Query: 171 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ-DLILK 229
LG L G++ ++I + L + P NLG AY G E +A F+ L L+
Sbjct: 87 NLGNALKALGQIDAAIEQFRNALTLAPTFPMAHYNLGNAYASLGRHEDAADAFERSLRLQ 146
Query: 230 DQN----------------HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNV 273
+ H AA+ ++ L + G AGA G L+ +
Sbjct: 147 PDDASSHNNLGNALHALGRHAAAIASFRRALELRPGH----AGALNNMGMSLNALDRPDE 202
Query: 274 AKECLLAALKADPK--AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAV 329
A C AAL +P+ AAH NLAN + TG H + E A +L+PN Y +
Sbjct: 203 AVPCFEAALATEPRFVAAHF--NLANTFDATGRHAQAVASFEAALRLQPNLPPAIYGM 258
>gi|196232461|ref|ZP_03131314.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
gi|196223533|gb|EDY18050.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
Length = 760
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 112/291 (38%), Gaps = 43/291 (14%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P+N A+ LGL+Y+ LG+ +A+ +Y +A L+ + + P +L + L
Sbjct: 71 PRNGAAYSNLGLVYRSLGRVDEAMEAYRRA----LQLQPALPEP-YHNLANLLRQTGRLN 125
Query: 132 ESSGDNSLDKELEPEELE----------------EILSKLKESMQSDTRQAVVWNTLGLI 175
E+ G L P +E E ++ +E+++ + A +N LG I
Sbjct: 126 EAVGWLQQAIRLRPHGVELHKNLGDVLSAAGRKDEAIAAYQEAIRLNPNFAEAYNNLGNI 185
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
L RL +I+V + P++ + NL A G + +Q + P
Sbjct: 186 LRGERRLSEAITVFGEAQRLLPDSAEIHNNLAAALADDGQFAHADAAYQRALKIKPAFPQ 245
Query: 236 ALINYAALLLCKYG--------------SVLAGAGANTGEGACLDQASAVNVAKECLLAA 281
AL L K G + A A G L + ++ A
Sbjct: 246 ALFGLGN-NLAKQGRRDEAAAAFRAALETQPDYAKAWNNLGNLLREMGQMDEAIAAYRRT 304
Query: 282 LKADPKAAHIWANLANAYYLTGD-------HRSSGKCLEKAAKLEPNCMST 325
+ P A +++NLANA TGD HR + + K A ++ N + T
Sbjct: 305 IALQPDYAEVYSNLANALKDTGDLDGAMETHRWARRLQPKNAGIQSNVIYT 355
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 60/154 (38%), Gaps = 21/154 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
W+ LGL+ ++GR ++ + LA++P N NLG+ Y G ++++ + ++ +
Sbjct: 43 WHMLGLLAHQTGRSDLALEYIGRALAIEPRNGAAYSNLGLVYRSLGRVDEAMEAYRRALQ 102
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
P N A L L Q +N A L A++ P
Sbjct: 103 LQPALPEPYHNLANL---------------------LRQTGRLNEAVGWLQQAIRLRPHG 141
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
+ NL + G + ++A +L PN
Sbjct: 142 VELHKNLGDVLSAAGRKDEAIAAYQEAIRLNPNF 175
>gi|187925716|ref|YP_001897358.1| hypothetical protein Bphyt_3746 [Burkholderia phytofirmans PsJN]
gi|187716910|gb|ACD18134.1| TPR repeat-containing protein [Burkholderia phytofirmans PsJN]
Length = 602
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 66/169 (39%), Gaps = 21/169 (12%)
Query: 153 SKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQ 212
S + +++ D A W+ GL+ G L ++ L + P+ D N G+A
Sbjct: 75 SLMSRALKLDRHDAACWSNRGLVAAALGHLDEAMICYDQALQLQPDFADAHNNFGVALQA 134
Query: 213 SGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVN 272
GD+ ++ + ++ AL + LL A G L + +
Sbjct: 135 QGDLSEAIEQYR----------LALASNPMLL-----------DARLNLGTALSKLGHFD 173
Query: 273 VAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
A C AL DP +A N+ NA+ GDH ++ E+A L N
Sbjct: 174 DALACYREALSLDPTSAEAHFNVGNAHKARGDHGAAIASFERALSLRAN 222
>gi|407714420|ref|YP_006834985.1| hypothetical protein BUPH_03230 [Burkholderia phenoliruptrix
BR3459a]
gi|407236604|gb|AFT86803.1| tetratricopeptide repeat-containing protein [Burkholderia
phenoliruptrix BR3459a]
Length = 615
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 72/170 (42%), Gaps = 25/170 (14%)
Query: 171 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ-DLILK 229
LG L G++ +I+ + L + P+ NLG AY +G E +A F+ L L+
Sbjct: 74 NLGNALKALGQIDEAIAQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFRRSLRLQ 133
Query: 230 DQN----------------HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNV 273
+ H A+ ++ L + G AGA G L+ +
Sbjct: 134 PDDASSHNNLGNALHALGRHEEAIASFRRTLELRPGH----AGALNNMGMSLNALGRADE 189
Query: 274 AKECLLAALKADPK--AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
A C AAL A+P+ AAH NLAN + TG H + E A L+PN
Sbjct: 190 AIPCFEAALAAEPRFVAAHF--NLANTFDATGRHAQAVASFEAALALQPN 237
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 77/189 (40%), Gaps = 13/189 (6%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
E+ + S++ A N LG L GR + +I+ L + P + + N+G+
Sbjct: 120 EDAADAFRRSLRLQPDDASSHNNLGNALHALGRHEEAIASFRRTLELRPGHAGALNNMGM 179
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYA---------ALLLCKYGSVLA----GA 255
+ G +++ CF+ + + AA N A A + + + LA
Sbjct: 180 SLNALGRADEAIPCFEAALAAEPRFVAAHFNLANTFDATGRHAQAVASFEAALALQPNLP 239
Query: 256 GANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 315
A G G L A L ++ DP+ A W L +A+ G H ++ + ++A
Sbjct: 240 PAIFGMGNALAALGRHTEAIPYLERSVGLDPQFALAWLCLGSAHQALGAHATALRAFDQA 299
Query: 316 AKLEPNCMS 324
+L+P+ S
Sbjct: 300 LRLQPDLAS 308
>gi|432331042|ref|YP_007249185.1| tetratricopeptide repeat protein [Methanoregula formicicum SMSP]
gi|432137751|gb|AGB02678.1| tetratricopeptide repeat protein [Methanoregula formicicum SMSP]
Length = 4078
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 97/239 (40%), Gaps = 38/239 (15%)
Query: 18 LGKCRSRISSK------MDSALEFGVDADGD---QSGLGTSSSSREEKVSSLKTGLVHVA 68
LGK RSR+ D AL + +DG+ + G+ + R E+ + L
Sbjct: 2936 LGKARSRLGQFEMAIRIYDHALTL-LPSDGEFLLEKGIALAHLERHEEAEVV---LGQST 2991
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 128
++P FL GL G+ AV S++KA L + DI + +SL + A+
Sbjct: 2992 ERLPDRFEPPFLRGLSLMLTGRYDDAVRSFDKA-LALNETDPDIWYHKAISLAHLGRAEE 3050
Query: 129 LLPESSGDNSLDK--ELEPEELEEILSK---------LKESMQSDTR-------QAVVWN 170
+P + DK L P++ E L + +++S R A W+
Sbjct: 3051 AVP------AFDKVLGLRPDDAEAFLGRGRAYYTLKSFDRAIESFDRVIGYLPQHAAAWH 3104
Query: 171 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 229
G+ L GR + +I+ L D N D + +AY G ++ + F+ L+ +
Sbjct: 3105 EKGMALYDLGRYEEAIAAFDKTLEEDGGNHDALYYCALAYAAIGKDAEAVESFELLLTR 3163
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 81/219 (36%), Gaps = 40/219 (18%)
Query: 55 EKVSSLKTGLVHVARKM----PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEA 110
EKV+ G +HV + PKN A F GL LG A+ S++K +IL
Sbjct: 1139 EKVNR-HEGAIHVFEILLEIDPKNGDAQFHKGLALAVLGDHRDAIGSFDKTLQIL----- 1192
Query: 111 DIARPELLSLVQIHHAQCLLPESSGD--NSLDKELEPEELEEILSKLKESMQSDTRQAVV 168
P+S+ N +E + + LK +++ +T
Sbjct: 1193 --------------------PDSAPAWYNKGKSLIEIGRYPDAIVALKRAIEIETSYTEA 1232
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
+ LG LLK+G +I L D +N N GIA +S E++ + F ++
Sbjct: 1233 FYYLGYALLKTGDYTGAIEAFDRNLTRDGSNAPGHFNRGIALEKSRRFEEALESFDKSLI 1292
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 267
D + AL G V A G + D+
Sbjct: 1293 YDPGN--------ALAFYHKGKVYADLGRHADAAFAFDK 1323
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 117/316 (37%), Gaps = 50/316 (15%)
Query: 55 EKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIAR 114
E +SS + + P +A +H+ GL Q G+ KA+ SY++A L + I
Sbjct: 2404 EAISSFDYTIQYA----PDHAQSHYRRGLALQAQGKYEKAIRSYKQA----LTHDGSITD 2455
Query: 115 PELLSLVQIHHAQCLLPESSGDNSL---DKELE--PEE----------------LEEILS 153
++ Q C + D +L D+ LE PE EE L+
Sbjct: 2456 ----AVYQT--GLCYAALNKNDQALKTFDRVLETLPERADILFHKSRALFRLMRYEEALT 2509
Query: 154 KLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQS 213
+ S+ + VW G L + GR + S+ LA++P++ C G +
Sbjct: 2510 AIDASLAIENNDVAVWEQKGSTLYELGRFEESLEAYDRSLALNPDSITCWYLKGRSLSDL 2569
Query: 214 GDMEQSAKCFQDLILKDQNHPAALINYAALLLC--KYGSVLAG-----------AGANTG 260
E++ CF +I D+ A + + LL K+ + A
Sbjct: 2570 ARYEEAIPCFDRVIETDETCAGAWLRKGSSLLSLGKFAPAIEALTRSLDLQPDNANGWYD 2629
Query: 261 EGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
G L + A A+ + K A+ W + A G + + E ++P
Sbjct: 2630 RGIALAELKQYEDAVASYDRAIAINRKYANAWYDKGVALVHLGRDTDAIQAFENTTAIDP 2689
Query: 321 NCMSTRY--AVAVSRI 334
M+ Y +A++R+
Sbjct: 2690 RFMNAFYDKGLALARL 2705
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 72/168 (42%), Gaps = 21/168 (12%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P++A ++ G+ LG+ +A+ SY KA EI+ AR + ++ L
Sbjct: 139 PRHAKVYYNKGIALADLGRHQEAIYSYNKAIEIV----PGYARAYYNKGISLYELGNLDD 194
Query: 132 ESSGDNSLDKELEPEEL------EEILSKLKES----------MQSDTRQAVVWNTLGLI 175
S N EL+P+++ ILSK ++ + + A +W G+
Sbjct: 195 ALSAFNRA-AELDPDDIWVWYYRSFILSKQDQNEFAAQSAEKFLAQEPDHADIWAIRGMS 253
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 223
L K GR ++ L A++P+ D LG+A ++ + + + F
Sbjct: 254 LFKLGRYDEALDALRQATAINPDLSDAWYYLGLAGVETRQFDDAVEAF 301
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 99/271 (36%), Gaps = 50/271 (18%)
Query: 54 EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC-EADI 112
EE VS+L L A K+ + GL LG+ +AV S++KA EI RC A
Sbjct: 703 EEAVSTLNRALDENA----KDVYGWCYKGLALSALGRFDEAVRSFDKALEINRRCARAFF 758
Query: 113 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 172
R L + + L S D +L EL P++ + + K
Sbjct: 759 ERGNAL----LKLGKPLEAVVSYDQAL--ELSPDDPKILYQK------------------ 794
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
G+ L + R +I S LA++P N LG+AY + + + F + I D
Sbjct: 795 GMALTQRERFDEAIRAFESALALEPENASGAYYLGVAYAGRERYDDAIRAFDNAIALDPT 854
Query: 233 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 292
A +G L Q A L+ALK DP
Sbjct: 855 QGQAF---------------------HFKGIALVQRERYTEAITAFLSALKRDPDNPVTH 893
Query: 293 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
L AY +++ +A +L+P+ +
Sbjct: 894 YYLGLAYLQDKQFKNAIPEFSRATELDPSLL 924
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 66/162 (40%), Gaps = 23/162 (14%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A A F G+ Y LG+ +AV+SY++A LR ++ I+H L
Sbjct: 411 PSCASAAFQQGVAYASLGRFSEAVASYDRA----LRINPGLSDA-------IYHKGFALS 459
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+ E+ + + + ++ D + A ++ GL L+K GR +I
Sbjct: 460 KLG------------RTEDAVQEFERTVAFDPKNAKAFHQKGLQLVKIGRFDEAIEAFDE 507
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNH 233
LA+ P + G A + G E + + F I+ + +
Sbjct: 508 SLALKPGFAQAAFDKGAALIRLGKFEDALQAFDQAIVTNSKY 549
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 96/269 (35%), Gaps = 43/269 (15%)
Query: 62 TGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI--LLRCEAD--IARPEL 117
T L MPK A H GL Y L Q AV SY++A EI L R A IA EL
Sbjct: 3835 TALDRALEIMPKKAILHDQKGLAYAALEQYRDAVQSYDRALEIEPLPRVFAHKGIALAEL 3894
Query: 118 LSLVQ--------IHH----AQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQ 165
I H A+ + + + L K + E+ E + D
Sbjct: 3895 GMYRDAIEAFDKAIEHDGNLAEAWMGKGNVQYDLGKYADAEKAYE------RGLALDPEN 3948
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
A W G++L + + ++ L +DP IAYF G + K +Q+
Sbjct: 3949 AEAWTRQGMVLSAQQKFEEALEHYDRALMIDP-------TFSIAYFTRGSALIAMKRYQE 4001
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 285
A+ + A+L + V A +G L + A AL+ D
Sbjct: 4002 ----------AVEAFDAMLHIQPDFV----DAYIHKGRALQELELYQDALAVFKRALEID 4047
Query: 286 PKAAHIWANLANAYYLTGDHRSSGKCLEK 314
P W ++ + G H + C EK
Sbjct: 4048 PTRKECWNDIGDILDRIGKHEEARICYEK 4076
>gi|428313243|ref|YP_007124220.1| hypothetical protein Mic7113_5158 [Microcoleus sp. PCC 7113]
gi|428254855|gb|AFZ20814.1| tetratricopeptide repeat protein [Microcoleus sp. PCC 7113]
Length = 484
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 81/234 (34%), Gaps = 47/234 (20%)
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
L+ ++Q D + LG L + G+ + LA+DPN + NLG+ ++ G
Sbjct: 64 LRRALQFDPFIPMAHYLLGNSLFQQGKTDLATDQYRRALALDPNMAEAYYNLGLTMYRQG 123
Query: 215 DMEQSAKCFQDLILKDQNHPAALINYAALL---------LCKYGSVLA------GAGANT 259
++ ++ +Q + N P A N A L L +Y +A GA N
Sbjct: 124 NVSEAISQYQKALSLKPNLPEARYNMALALESQGRTQEALAEYNQAIALNPDNVGAPYNM 183
Query: 260 G-----------EGACLDQASAVNV---------------------AKECLLAALKADPK 287
G A QA +N A+E L K DPK
Sbjct: 184 GLLYVRQNQIEPAIAAFQQAVKLNPDLIEGHYQLGILQARQGRWKEAEESLRTVSKLDPK 243
Query: 288 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ 341
L GD +G A LEPN + + +R+K + Q
Sbjct: 244 FVQAQYQLGMVLSERGDFEGAGDRFAWVANLEPNNVDVHRRLGAARLKTRQYDQ 297
>gi|171060749|ref|YP_001793098.1| type 12 methyltransferase [Leptothrix cholodnii SP-6]
gi|170778194|gb|ACB36333.1| Methyltransferase type 12 [Leptothrix cholodnii SP-6]
Length = 456
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%)
Query: 153 SKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQ 212
S ++++ D R N LGL+ G L S+I + + P N + LGI Y+
Sbjct: 150 SHYEQALAIDPRHVNAHNNLGLLHAARGDLASAIRCYCQAIELMPGNSEGRKLLGITYYT 209
Query: 213 SGDMEQSAKCFQDLILKDQNHPAALINYAA 242
G + ++A+ F+ + + +HP A YA+
Sbjct: 210 VGKIAEAAEVFRQWLADEPDHPVARHMYAS 239
>gi|281337757|gb|EFB13341.1| hypothetical protein PANDA_021118 [Ailuropoda melanoleuca]
Length = 1037
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 83 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 137
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 138 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 181
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 182 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 216
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 163 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 217
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 218 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 260
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 261 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 316
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 317 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 371
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 372 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 416
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 417 PAFADAHSNLASI------HKDSGNIPEAI 440
>gi|152982107|ref|YP_001352212.1| hypothetical protein mma_0522 [Janthinobacterium sp. Marseille]
gi|151282184|gb|ABR90594.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 699
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 224
WN LG+IL +SG+L++S+ L LA+ PN+ NLG + + +EQ+ + +Q
Sbjct: 121 WNNLGIILQESGKLEASLDSLERALALRPNDARAHNNLGNTWRRLYRLEQAEQHYQ 176
>gi|291613082|ref|YP_003523239.1| hypothetical protein Slit_0612 [Sideroxydans lithotrophicus ES-1]
gi|291583194|gb|ADE10852.1| TPR repeat-containing protein [Sideroxydans lithotrophicus ES-1]
Length = 834
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 39/201 (19%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A AH+ LG + G+ +AV+SY KA +I A L+
Sbjct: 281 PGLAEAHYNLGNTLKSQGKLEEAVASYRKALQI---------------------APGLVG 319
Query: 132 ESSGDNSLDKELEPE-ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
SS +L L+ + +L E + L+ +QS+ ++ LG L GRL+ + S
Sbjct: 320 ASS---NLGAALQAQGKLAEAETILRNVLQSNPDSLEAYSNLGSTLHDMGRLEEARSEYE 376
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI------LKDQNHPAALINYAALL 244
L + P++ + + NLG G E++ +CF+D + LK +++ +NY++
Sbjct: 377 KALRIKPDHAEILSNLGNTLMTMGLQEEAVRCFRDALEYKPDFLKARSNLLFSLNYSSSS 436
Query: 245 L--------CKYGSVLAGAGA 257
C+YG +++ A
Sbjct: 437 SPEDCLAEACRYGEIVSSKAA 457
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 95/255 (37%), Gaps = 44/255 (17%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
PK+A AH LG LG+ +A +S+ +A L+ D A L +H
Sbjct: 213 PKDAQAHSNLGNTLSYLGRLDEAETSFRRA----LKINKDFAEAHLNLGATLH------- 261
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
L + E E +LK + A LG L G+L+ +++
Sbjct: 262 ------DLGRFGEAEVSYRCAIQLKPGL------AEAHYNLGNTLKSQGKLEEAVASYRK 309
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 251
L + P NLG A G + ++ ++++ Q++P +L Y+ L
Sbjct: 310 ALQIAPGLVGASSNLGAALQAQGKLAEAETILRNVL---QSNPDSLEAYSNL-------- 358
Query: 252 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 311
G+ L + A+ AL+ P A I +NL N G + +C
Sbjct: 359 ----------GSTLHDMGRLEEARSEYEKALRIKPDHAEILSNLGNTLMTMGLQEEAVRC 408
Query: 312 LEKAAKLEPNCMSTR 326
A + +P+ + R
Sbjct: 409 FRDALEYKPDFLKAR 423
>gi|254784359|ref|YP_003071787.1| hypothetical protein TERTU_0096 [Teredinibacter turnerae T7901]
gi|237683944|gb|ACR11208.1| tetratricopeptide repeat domain protein [Teredinibacter turnerae
T7901]
Length = 733
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 48/79 (60%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
+++++ + L+ S+++ + ++ LG + L +G +Q +I ++L + P N + N
Sbjct: 478 KQVDDAIKLLQSSIEAAPKDWRNYSHLGRLYLSTGEMQLAIEAYLAVLEITPKNSSVLSN 537
Query: 206 LGIAYFQSGDMEQSAKCFQ 224
LG AY+ +G+++++ + FQ
Sbjct: 538 LGTAYYFTGNLKKAREYFQ 556
>gi|391328604|ref|XP_003738777.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit
[Metaseiulus occidentalis]
Length = 1034
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG +L + G LQ ++ + + P+ D NL A +GDMEQ+ + +
Sbjct: 102 YSNLGNVLKERGHLQEALDNYRQAVRLKPDFIDGYINLAAALVAAGDMEQAVQAY----- 156
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L S ++ AK C L A++ P
Sbjct: 157 ------ISALQYNPDLYC----------VRSDLGNLLKALSRLDEAKACYLKAIETCPTF 200
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+P+ +
Sbjct: 201 AVAWSNLGCVFNSQGEVWLAIHHFEKAVALDPHFL 235
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 68/168 (40%), Gaps = 13/168 (7%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
AVV L + + G + +I + + PN D NL A + G +++S KC+
Sbjct: 269 AVVHGNLACVYYEQGLIDMAIETYKRAIELQPNFPDAYCNLANALKEKGHVQESEKCYNT 328
Query: 226 LILKDQNHPAALINYAAL------------LLCKYGSVLA-GAGANTGEGACLDQASAVN 272
+ +H +L N A + L K V A A++ + L Q +N
Sbjct: 329 ALRLMPSHADSLNNLANIKREQGQIEDATKLYAKALDVYPEFAAAHSNLASVLQQQGKLN 388
Query: 273 VAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
A A++ P A ++N+ N GD + + +C +A + P
Sbjct: 389 EALMHYREAIRISPTFADAYSNMGNTLKELGDIQGAMQCYSRAITINP 436
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 113/300 (37%), Gaps = 67/300 (22%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
AV W+ LG + G + +I +A+DP+ D AY G++ + A+ F
Sbjct: 201 AVAWSNLGCVFNSQGEVWLAIHHFEKAVALDPHFLD-------AYINLGNVLKEARIFDR 253
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL-DQASAVNVAKECLLAALKA 284
+ AA + AL L +V+ G AC+ + +++A E A++
Sbjct: 254 AV-------AAYLR--ALSLSPNNAVV------HGNLACVYYEQGLIDMAIETYKRAIEL 298
Query: 285 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPT 344
P + NLANA G + S KC A +L P+ +
Sbjct: 299 QPNFPDAYCNLANALKEKGHVQESEKCYNTALRLMPSHADSL------------------ 340
Query: 345 EQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAG 404
N +A+I RE QIE A +A + E AAA
Sbjct: 341 -------NNLANIKREQG--QIED--ATKLYAKALDVYPEFAAAH--------------- 374
Query: 405 AGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
+ ++ L Q +N A A++ P A ++N+ N GD + + +C + + +
Sbjct: 375 SNLASVLQQQGKLNEALMHYREAIRISPTFADAYSNMGNTLKELGDIQGAMQCYSRAITI 434
>gi|440901878|gb|ELR52744.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit, partial [Bos grunniens mutus]
Length = 1037
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 83 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 137
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 138 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 181
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 182 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 216
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 163 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 217
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 218 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 260
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 261 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 316
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 317 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 371
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 372 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 416
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 417 PAFADAHSNLASI------HKDSGNIPEAI 440
>gi|344282022|ref|XP_003412774.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Loxodonta africana]
Length = 1046
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|27499606|gb|AAO17363.1| O-linked GlcNAc transferase [Mus musculus]
Length = 1046
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|62821820|ref|NP_001017359.1| O-linked N-acetylglucosamine transferase isoform 1 [Danio rerio]
gi|56967372|gb|AAW31870.1| O-GlcNAc transferase variant 1 [Danio rerio]
Length = 1062
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 161/422 (38%), Gaps = 84/422 (19%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 128
++ P A A+ LG +Y+ GQ +A+ Y A LR + D I+ A
Sbjct: 83 KQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHA----LRLKPDFIDG------YINLAAA 132
Query: 129 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 188
L+ ++GD +E + ++Q + V + LG +L GRL+ + +
Sbjct: 133 LV--AAGD-----------MEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKAC 179
Query: 189 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 248
+ PN NLG + G++ + F+ + D N A IN +L K
Sbjct: 180 YLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVL--KE 237
Query: 249 GSVLAGAGANT--------------GEGACL-DQASAVNVAKECLLAALKADPKAAHIWA 293
+ A A G AC+ + +++A + A++ P +
Sbjct: 238 ARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYC 297
Query: 294 NLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ------------ 341
NLANA G+ + +C A +L P +A +++ + + +R Q
Sbjct: 298 NLANALKEKGNVSEAEECYNTALRLCPT-----HADSLNNLANIKREQGNIEEAVQLYRK 352
Query: 342 --EPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKM 399
E + + A + +AS+L++ +Q A + + A A+ N L +M
Sbjct: 353 ALEVFPEFAAAHSNLASVLQQQGKLQ----EALMHYKEAIRISPTFADAYSNMGNTLKEM 408
Query: 400 EECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 459
++ G A +C A++ +P A +NLA+ H+ SG E
Sbjct: 409 QDVQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSGNIPE 447
Query: 460 KV 461
+
Sbjct: 448 AI 449
>gi|374578333|ref|ZP_09651429.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Bradyrhizobium sp. WSM471]
gi|374426654|gb|EHR06187.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Bradyrhizobium sp. WSM471]
Length = 461
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 16/209 (7%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+L + L ++++ D + + + G++ RL +++ + + P+N +
Sbjct: 122 DLNRAAADLSKAIELDPQNSESYELRGVVYTNQRRLDRALADYDQAIKLKPDNAQAWSDR 181
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G+ Y+ GD E++ + + + D N P + N A K G LA A + GE LD
Sbjct: 182 GVTYYLGGDNEKAIRDLSEALRLDPNGPRSYTNRGA-AYKKLGQ-LAKAVFDDGEAIRLD 239
Query: 267 QASAVNVAKECL-LAALKADPKA-------------AHIWANLANAYYLTGDHRSSGKCL 312
L LAA+ KA + + N ++Y+L G+ ++
Sbjct: 240 PKVPEYYDNRGLSLAAMGEYDKAIADYDQALRLAPRPNFFTNRGDSYHLKGELGAALSDY 299
Query: 313 EKAAKLEPNCMSTRYAVAVSRIKDAERSQ 341
E A KL+PN T AV K ER +
Sbjct: 300 EAALKLDPNFAQTYNNRAVLYKKMGERKK 328
>gi|334119969|ref|ZP_08494053.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
gi|333457610|gb|EGK86233.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
Length = 407
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 70/191 (36%), Gaps = 21/191 (10%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
++ ++ +++Q A WN G++L + R +I+ + PN D N G+
Sbjct: 196 QDAIAAYDQALQIQPDLADTWNNRGVVLTRMQRYPEAIASYEQATTIRPNYPDAWNNRGV 255
Query: 209 AYFQSGDMEQSAKCFQDLIL-----------------KDQNHPAALINYAALLLCKYGSV 251
+ +++ C++ I K Q + A+I+Y L K
Sbjct: 256 VLLELQKYQEAIGCYEQAIQAKPDYADAWNNRGVAFSKMQEYEQAVISYNHALQIKNDYT 315
Query: 252 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 311
A G L + A + A K P IW N A Y L G + +
Sbjct: 316 ----DAWNNRGVALSKLQKYEAAIDSYDNAAKIRPDFYRIWYNKARCYALQGKIELAIEN 371
Query: 312 LEKAAKLEPNC 322
L++A L PN
Sbjct: 372 LKRALNLNPNV 382
>gi|326918804|ref|XP_003205676.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like,
partial [Meleagris gallopavo]
Length = 1038
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 85 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 139
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 140 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 183
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 184 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 218
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 130/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 165 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 219
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 220 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 262
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + +C A +L P
Sbjct: 263 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPT---- 318
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 319 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 373
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 374 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 418
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 419 PAFADAHSNLASI------HKDSGNIPEAI 442
>gi|312372803|gb|EFR20681.1| hypothetical protein AND_19668 [Anopheles darlingi]
Length = 996
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 12/170 (7%)
Query: 77 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARP--ELLSLVQIHHAQCLLPESS 134
AH +G Y L +A +Y KA+ +L + A+P + + +H L +
Sbjct: 175 AHINVGRTYNHLKMFKEAEMAYLKAKSLLPK-----AKPGESYQARIAPNHLNVFLNLA- 228
Query: 135 GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLA 194
N + K E ++L + SM+SD QA + G IL+K R + + V L
Sbjct: 229 --NLISKNATRLEEADLLYRQAISMRSDYTQAYI--NRGDILIKLNRTKEAQEVYERALL 284
Query: 195 VDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
D N D NLG+ + + G Q+ + D H AL+N A LL
Sbjct: 285 YDSANPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHEQALLNSAILL 334
>gi|354502726|ref|XP_003513433.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit
[Cricetulus griseus]
Length = 1046
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 130/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPKFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|333993657|ref|YP_004526270.1| putative slei family protein [Treponema azotonutricium ZAS-9]
gi|333734825|gb|AEF80774.1| putative slei family protein [Treponema azotonutricium ZAS-9]
Length = 865
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 80/200 (40%), Gaps = 26/200 (13%)
Query: 162 DTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 221
D + G+ L +GRL+ + + + L P + + NLGI +F+ G +++
Sbjct: 172 DRNNPTLHFNYGVALEANGRLEDAANEYRAALRSKPGWLEPMNNLGIIHFKQGRHDKALD 231
Query: 222 CFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAA 281
F +I D ++ A N G + A G N A + A
Sbjct: 232 VFNRIIDSDPSNAEARNN--------MGVIQADQGKNKE-------------AVQNYRRA 270
Query: 282 LKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ 341
++ADP+ NL +GD ++ LEK KL P+ R ++ +K ER
Sbjct: 271 IEADPRYTKAVVNLERTLEESGDFANAVLELEKLVKLTPDSADLRDRLSGLYLK-MERYP 329
Query: 342 EPTEQ----LSWAGNEMASI 357
E EQ L WA + ++
Sbjct: 330 EALEQAKAALEWAPEDTQAL 349
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 47/92 (51%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
LE+ ++ + +++S N LG+I K GR ++ V + ++ DP+N + N+G
Sbjct: 192 LEDAANEYRAALRSKPGWLEPMNNLGIIHFKQGRHDKALDVFNRIIDSDPSNAEARNNMG 251
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 239
+ G +++ + ++ I D + A++N
Sbjct: 252 VIQADQGKNKEAVQNYRRAIEADPRYTKAVVN 283
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 95/262 (36%), Gaps = 44/262 (16%)
Query: 70 KMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCL 129
K P + AH LLG R + +A + +L + DI L ++ I+ Q
Sbjct: 35 KKPDSREAHLLLGATLAREAKLTEAADEFTT---LLAKNPQDIEA--LNNIAVIYRRQG- 88
Query: 130 LPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVL 189
+L++ L L E++ + +A +G I + G L+++
Sbjct: 89 -----------------KLQDALGALVEAIDLEPTKAEFHYNIGNIHKQMGNLKAASMAY 131
Query: 190 SSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYG 249
+ ++ +DPN NLG Y Q + +++ F + D+N+P NY
Sbjct: 132 AKVIELDPNYVSAYNNLGTIYDQLKEYDKAYGIFHKGLNLDRNNPTLHFNY--------- 182
Query: 250 SVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 309
G L+ + A AAL++ P NL ++ G H +
Sbjct: 183 ------------GVALEANGRLEDAANEYRAALRSKPGWLEPMNNLGIIHFKQGRHDKAL 230
Query: 310 KCLEKAAKLEPNCMSTRYAVAV 331
+ +P+ R + V
Sbjct: 231 DVFNRIIDSDPSNAEARNNMGV 252
>gi|190340092|gb|AAI63923.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase) [Danio rerio]
Length = 1046
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 86/420 (20%), Positives = 160/420 (38%), Gaps = 80/420 (19%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 128
++ P A A+ LG +Y+ GQ +A+ Y A LR + D I+ A
Sbjct: 83 KQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHA----LRLKPDFIDG------YINLAAA 132
Query: 129 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 188
L+ ++GD +E + ++Q + V + LG +L GRL+ + +
Sbjct: 133 LV--AAGD-----------MEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKAC 179
Query: 189 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL---- 244
+ PN NLG + G++ + F+ + D N A IN +L
Sbjct: 180 YLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEAR 239
Query: 245 --------LCKYGSVLAGAGANTGEGACL-DQASAVNVAKECLLAALKADPKAAHIWANL 295
+ S+ G AC+ + +++A + A++ P + NL
Sbjct: 240 IFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNL 299
Query: 296 ANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ-------------- 341
ANA G+ + +C A +L P +A +++ + + +R Q
Sbjct: 300 ANALKEKGNVSEAEECYNTALRLCPT-----HADSLNNLANIKREQGNIEEAVQLYRKAL 354
Query: 342 EPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEE 401
E + + A + +AS+L++ +Q A + + A A+ N L +M++
Sbjct: 355 EVFPEFAAAHSNLASVLQQQGKLQ----EALMHYKEAIRISPTFADAYSNMGNTLKEMQD 410
Query: 402 CAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
G A +C A++ +P A +NLA+ H+ SG E +
Sbjct: 411 VQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSGNIPEAI 449
>gi|385203261|ref|ZP_10030131.1| Flp pilus assembly protein TadD [Burkholderia sp. Ch1-1]
gi|385183152|gb|EIF32426.1| Flp pilus assembly protein TadD [Burkholderia sp. Ch1-1]
Length = 596
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E E + ++ D R+ + LG++LLK+GR Q + SV +L ++P +C+
Sbjct: 149 ERFPEAEPYCRRALLLDARRERAQHNLGMVLLKTGRHQEAQSVFRRVLELEPEHCEACNG 208
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
L +A + E++ + + D H A N A +L
Sbjct: 209 LAVALMKDYRYEEAESFVRRALNLDPEHRVATRNLAHIL 247
>gi|323526980|ref|YP_004229133.1| tetratricopeptide repeat-containing protein [Burkholderia sp.
CCGE1001]
gi|323383982|gb|ADX56073.1| Tetratricopeptide TPR_1 repeat-containing protein [Burkholderia sp.
CCGE1001]
Length = 627
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 72/170 (42%), Gaps = 25/170 (14%)
Query: 171 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ-DLILK 229
LG L G++ +I+ + L + P+ NLG AY +G E +A F+ L L+
Sbjct: 86 NLGNALKALGQIDEAIAQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFRRSLRLQ 145
Query: 230 DQN----------------HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNV 273
+ H A+ ++ L + G AGA G L+ +
Sbjct: 146 PDDASSHNNLGNALHALGRHEEAIASFRRTLELRPGH----AGALNNMGMSLNALGRADE 201
Query: 274 AKECLLAALKADPK--AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
A C AAL A+P+ AAH NLAN + TG H + E A L+PN
Sbjct: 202 AIPCFEAALAAEPRFVAAHF--NLANTFDATGRHAQAVASFEAALALQPN 249
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 77/189 (40%), Gaps = 13/189 (6%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
E+ + S++ A N LG L GR + +I+ L + P + + N+G+
Sbjct: 132 EDAADAFRRSLRLQPDDASSHNNLGNALHALGRHEEAIASFRRTLELRPGHAGALNNMGM 191
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYA---------ALLLCKYGSVLA----GA 255
+ G +++ CF+ + + AA N A A + + + LA
Sbjct: 192 SLNALGRADEAIPCFEAALAAEPRFVAAHFNLANTFDATGRHAQAVASFEAALALQPNLP 251
Query: 256 GANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 315
A G G L A L ++ DP+ A W L +A+ G H ++ + ++A
Sbjct: 252 PAIFGMGNALAALGRHTEAIPYLERSVGLDPQFALAWLCLGSAHQGLGAHATALRAFDQA 311
Query: 316 AKLEPNCMS 324
+L+P+ S
Sbjct: 312 LRLQPDLAS 320
>gi|170065407|ref|XP_001867926.1| smile protein [Culex quinquefasciatus]
gi|167882504|gb|EDS45887.1| smile protein [Culex quinquefasciatus]
Length = 715
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 57/138 (41%), Gaps = 21/138 (15%)
Query: 126 AQCLLPESSGDNSLDKELEPEELEEIL----------SKLKE---------SMQSDTRQA 166
A+ LLP++ S + P L L ++L+E SM+SD QA
Sbjct: 248 AKSLLPKAKPGESYQARIAPNHLNVFLNLANLISKNATRLEEADLLYRQAISMRSDYTQA 307
Query: 167 VVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDL 226
+ G IL+K R + + V L D N D NLG+ + + G Q+
Sbjct: 308 YI--NRGDILIKLNRTKEAQEVYERALLYDSTNPDIYYNLGVVFLEQGKASQALAYLDKA 365
Query: 227 ILKDQNHPAALINYAALL 244
+ D H AL+N A LL
Sbjct: 366 LEFDPEHEQALLNSAILL 383
>gi|116329308|ref|YP_799028.1| hypothetical protein LBL_2754 [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116122052|gb|ABJ80095.1| TPR-repeat-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
Length = 378
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E + K++++SD+ ++ + +LG + G +S+I + L +DP D NL I+
Sbjct: 196 EAIHLFKKAIKSDSEYSLSYLSLGYLYDSGGNFRSAIRYYEAALKIDPEYPDLWNNLAIS 255
Query: 210 YFQSGDMEQSAKCFQ 224
Y+ G E++ FQ
Sbjct: 256 YYNDGQTEKALSHFQ 270
>gi|13775066|gb|AAK39123.1|AF363030_1 UDP-N-acetylglucosaminyltransferase [Mus musculus]
Length = 1046
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|326430815|gb|EGD76385.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
Length = 809
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 99/248 (39%), Gaps = 30/248 (12%)
Query: 81 LGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLD 140
+GL+ G+ +A++ YE A I LR E + + E ++ + + + + D ++
Sbjct: 276 VGLVLNEFGEHDRAIAYYEAALAIRLRTEGE--KGENVAALYNNLGEAYRHKGECDKAV- 332
Query: 141 KELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAV----- 195
++L + L E S A +N LG G +I LA+
Sbjct: 333 -AFYEKDLAITVETLGEKHPS---TATTYNGLGTAYGDKGDYDRAIECFEKALAIYVEML 388
Query: 196 ---DPNNCDCIGNLGIAYFQSGDMEQSAKCFQ-DLILK----DQNHPAALINYAALLLCK 247
P+ NLG AY+ GD +++ ++ DL + + HP +Y L +
Sbjct: 389 GEKHPSTASTYNNLGSAYYSKGDYDKAIAFYEKDLAITVETLGEKHPGTADSYLGLGVAY 448
Query: 248 YGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRS 307
Y N ++A A+ V E L + P A + NL N YY G++
Sbjct: 449 YSK-----SENDEAIQLYEKALAIKV--ETLG---EKHPSTAETYNNLGNTYYSKGEYDK 498
Query: 308 SGKCLEKA 315
+ + EKA
Sbjct: 499 AIQLYEKA 506
>gi|46909607|ref|NP_631883.2| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit [Mus musculus]
gi|146325019|sp|Q8CGY8.2|OGT1_MOUSE RecName: Full=UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit;
AltName: Full=O-GlcNAc transferase subunit p110;
AltName: Full=O-linked N-acetylglucosamine transferase
110 kDa subunit; Short=OGT
gi|34785719|gb|AAH57319.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase) [Mus musculus]
gi|148682191|gb|EDL14138.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase), isoform CRA_b [Mus
musculus]
Length = 1046
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|23006671|ref|ZP_00048884.1| COG0457: FOG: TPR repeat [Magnetospirillum magnetotacticum MS-1]
Length = 259
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
++ L + + + A +NT G ++G+ +IS S + +DP + N +AY
Sbjct: 27 IASLSDVISRNPSDAGAYNTRGAAYARAGQFGEAISDFSKAIQLDPGSASAYNNRALAYR 86
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAAL 243
Q+G + + + F I D N AA I A L
Sbjct: 87 QTGRNDAAMQDFSKAISSDPNFSAAYIGRANL 118
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 21/192 (10%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPN-NCDCIGN 205
+ E +S +++Q D A +N L ++GR +++ S ++ DPN + IG
Sbjct: 56 QFGEAISDFSKAIQLDPGSASAYNNRALAYRQTGRNDAAMQDFSKAISSDPNFSAAYIGR 115
Query: 206 LGIAYFQSGDME--------------QSAKCF--QDLILKDQNHPAALINYAALLLCKYG 249
+ Q GD++ +SA+ + + L+ + Q H A + A + +
Sbjct: 116 ANLERAQ-GDLDGALNDLNVAIRLAPESAEAYHARGLVRQKQGHNAEAVGDFAAAIDRNP 174
Query: 250 SVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 309
V A A G L + A E AAL + K A WA AY + +
Sbjct: 175 FVAAPYAA---RGQSLISMGQYDKAIEDFNAALNVNAKDASSWAYRGLAYEKANRRKEAS 231
Query: 310 KCLEKAAKLEPN 321
+ ++AA+L+PN
Sbjct: 232 ESYQQAARLDPN 243
>gi|379335302|gb|AFD03286.1| TPR repeat-containing protein [uncultured archaeon W4-93a]
Length = 272
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 21/159 (13%)
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
+ ++K+ + + +IS+ + L DP N + + N G+A Q + CF D IL+
Sbjct: 17 AMAMVKANQPKIAISLFNKALKQDPKNVEALHNKGLALNQMKKYSDAITCF-DKILEISP 75
Query: 233 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 292
+ A N A+ + G+ + A E A+KADPK A
Sbjct: 76 NDAPAFNNKAIAQAELGNTVD--------------------AFENYDRAIKADPKYAAAH 115
Query: 293 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 331
N + H + KCLE+A KL+P ++ + V
Sbjct: 116 FNKGVLFDRLSSHEDAIKCLEEAIKLDPKKLNALFYKGV 154
>gi|325958505|ref|YP_004289971.1| hypothetical protein Metbo_0748 [Methanobacterium sp. AL-21]
gi|325329937|gb|ADZ08999.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
sp. AL-21]
Length = 158
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 15/146 (10%)
Query: 204 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVL--------- 252
N GI ++++G ++ KC++ + D+N AL N +L L +Y L
Sbjct: 9 NNEGIEFYENGQYPEALKCYEKALELDKNFVQALNNKGNVLRVLGRYDESLESFDTAILK 68
Query: 253 --AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGK 310
A +GA + N A EC ALK +PK + +N A +GD S +
Sbjct: 69 EPKNAELWVNKGAVYYEMDDYNQAIECYDEALKIEPKNTNALSNKGAALANSGDLDSGME 128
Query: 311 CLEKAAKLEPNCMSTRYAVAVSRIKD 336
C +A K++P + + ++KD
Sbjct: 129 CFNEALKIDP--LDVNAHINRDKLKD 152
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 23/144 (15%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E L +++++ D N G +L GR S+ + + +P N + N G
Sbjct: 23 EALKCYEKALELDKNFVQALNNKGNVLRVLGRYDESLESFDTAILKEPKNAELWVNKGAV 82
Query: 210 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 269
Y++ D Q+ +C+ + + + + AL N A L AN+G+
Sbjct: 83 YYEMDDYNQAIECYDEALKIEPKNTNALSNKGAAL------------ANSGD-------- 122
Query: 270 AVNVAKECLLAALKADP--KAAHI 291
++ EC ALK DP AHI
Sbjct: 123 -LDSGMECFNEALKIDPLDVNAHI 145
>gi|158293248|ref|XP_314563.4| AGAP010599-PA [Anopheles gambiae str. PEST]
gi|157016867|gb|EAA09887.4| AGAP010599-PA [Anopheles gambiae str. PEST]
Length = 663
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 12/170 (7%)
Query: 77 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARP--ELLSLVQIHHAQCLLPESS 134
AH +G Y L +A +Y KA+ +L + A+P + + +H L +
Sbjct: 132 AHINVGRTYNHLKMFKEAEQAYLKAKSLLPK-----AKPGESYQARIAPNHLNVFLNLA- 185
Query: 135 GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLA 194
N + K E ++L + SM+SD QA + G IL+K R + + V L
Sbjct: 186 --NLISKNATRLEEADLLYRQAISMRSDYTQAYI--NRGDILIKLNRTKEAQEVYERALL 241
Query: 195 VDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
D N D NLG+ + + G Q+ + D H AL+N A LL
Sbjct: 242 YDSTNPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHEQALLNSAILL 291
>gi|431914414|gb|ELK15671.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit [Pteropus alecto]
Length = 1046
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|428217378|ref|YP_007101843.1| hypothetical protein Pse7367_1118 [Pseudanabaena sp. PCC 7367]
gi|427989160|gb|AFY69415.1| Tetratricopeptide TPR_2 repeat-containing protein [Pseudanabaena
sp. PCC 7367]
Length = 539
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 110/286 (38%), Gaps = 55/286 (19%)
Query: 76 HAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSG 135
+ H+ LG+ Q +A+ +Y++A E+ D++ + + + G
Sbjct: 274 NVHYNLGVALTANDQIDRAIVAYQRATEL------DVSNADAFAAL-------------G 314
Query: 136 DNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAV 195
N L+K L E + + S++ + + + +N LGL L + G L +I+ +A+
Sbjct: 315 KNLLEKR----RLNEAANAFRRSVELNPNEPIAYNGLGLTLRRQGNLSGAITAYEQAIAL 370
Query: 196 DPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGA 255
+P NLG A + F+ D N+ A N LL +
Sbjct: 371 NPRYASAYNNLGRALSDQDRPADAIVAFRSATELDPNNSVAFSNLGQLLRTQ-------- 422
Query: 256 GANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 315
G +T A L+Q A+++ K P+ + NL A GD + +KA
Sbjct: 423 GDSTEAIAALEQ--AISLGK----------PELWSDYTNLGLALADQGDLTKAEAAYQKA 470
Query: 316 AKLEPNCMSTRYAV------------AVSRIKDAERSQEPTEQLSW 349
+L+P + + A++ K+A R E + W
Sbjct: 471 IELQPTFARAHFGMGALQTAQGNIRDAIAAYKEALRLYEAEDSTEW 516
>gi|66347871|ref|NP_001018116.1| O-linked N-acetylglucosamine transferase isoform 3 [Danio rerio]
gi|56967376|gb|AAW31872.1| O-GlcNAc transferase variant 3 [Danio rerio]
Length = 1046
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 161/422 (38%), Gaps = 84/422 (19%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 128
++ P A A+ LG +Y+ GQ +A+ Y A LR + D I+ A
Sbjct: 83 KQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHA----LRLKPDFIDG------YINLAAA 132
Query: 129 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 188
L+ ++GD +E + ++Q + V + LG +L GRL+ + +
Sbjct: 133 LV--AAGD-----------MEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKAC 179
Query: 189 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 248
+ PN NLG + G++ + F+ + D N A IN +L K
Sbjct: 180 YLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVL--KE 237
Query: 249 GSVLAGAGANT--------------GEGACL-DQASAVNVAKECLLAALKADPKAAHIWA 293
+ A A G AC+ + +++A + A++ P +
Sbjct: 238 ARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYC 297
Query: 294 NLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ------------ 341
NLANA G+ + +C A +L P +A +++ + + +R Q
Sbjct: 298 NLANALKEKGNVSEAEECYNTALRLCPT-----HADSLNNLANIKREQGNIEEAVQLYRK 352
Query: 342 --EPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKM 399
E + + A + +AS+L++ +Q A + + A A+ N L +M
Sbjct: 353 ALEVFPEFAAAHSNLASVLQQQGKLQ----EALMHYKEAIRISPTFADAYSNMGNTLKEM 408
Query: 400 EECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 459
++ G A +C A++ +P A +NLA+ H+ SG E
Sbjct: 409 QDVQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSGNIPE 447
Query: 460 KV 461
+
Sbjct: 448 AI 449
>gi|348516822|ref|XP_003445936.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Oreochromis niloticus]
Length = 1048
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 86/420 (20%), Positives = 160/420 (38%), Gaps = 80/420 (19%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 128
++ P A A+ LG +Y+ GQ +A+ Y A LR + D I+ A
Sbjct: 83 KQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHA----LRLKPDFIDG------YINLAAA 132
Query: 129 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 188
L+ ++GD +E + ++Q + V + LG +L GRL+ + +
Sbjct: 133 LV--AAGD-----------MEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKAC 179
Query: 189 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL---- 244
+ PN NLG + G++ + F+ + D N A IN +L
Sbjct: 180 YLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEAR 239
Query: 245 --------LCKYGSVLAGAGANTGEGACL-DQASAVNVAKECLLAALKADPKAAHIWANL 295
+ S+ G AC+ + +++A + A++ P + NL
Sbjct: 240 IFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNL 299
Query: 296 ANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ-------------- 341
ANA G+ + +C A +L P +A +++ + + +R Q
Sbjct: 300 ANALKEKGNVSEAEECYNTALRLCPT-----HADSLNNLANIKREQGYIEEAVQLYRKAL 354
Query: 342 EPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEE 401
E + + A + +AS+L++ +Q A + + A A+ N L +M++
Sbjct: 355 EVFPEFAAAHSNLASVLQQQGKLQ----EALMHYKEAIRISPTFADAYSNMGNTLKEMQD 410
Query: 402 CAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
G A +C A++ +P A +NLA+ H+ SG E +
Sbjct: 411 VQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSGNIPEAI 449
>gi|242050188|ref|XP_002462838.1| hypothetical protein SORBIDRAFT_02g032820 [Sorghum bicolor]
gi|241926215|gb|EER99359.1| hypothetical protein SORBIDRAFT_02g032820 [Sorghum bicolor]
Length = 211
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 62/134 (46%)
Query: 103 EILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSD 162
++L+R E D++ EL V+ A G L ++ P ++ + + + + +
Sbjct: 54 QVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAAIKYLQQAIDKWDRDE 113
Query: 163 TRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKC 222
A V+N LG+ + +L +I + + P NLG AY Q D++ + K
Sbjct: 114 QDLAQVYNALGVSYKRDNKLDKAIQQFQKAVELQPGYVTAWNNLGDAYEQKKDLKLALKA 173
Query: 223 FQDLILKDQNHPAA 236
F++++L D N+ A
Sbjct: 174 FEEVLLFDPNNKVA 187
>gi|157112300|ref|XP_001657484.1| smile protein [Aedes aegypti]
gi|108883757|gb|EAT47982.1| AAEL000971-PA [Aedes aegypti]
Length = 707
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 12/170 (7%)
Query: 77 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARP--ELLSLVQIHHAQCLLPESS 134
AH +G Y L +A +Y KA+ +L + A+P + + +H L +
Sbjct: 155 AHINVGRTYNHLKMFKEAEQAYLKAKSLLPK-----AKPGESYQARIAPNHLNVFLNLA- 208
Query: 135 GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLA 194
N + K E ++L + SM+SD QA + G IL+K R + + V L
Sbjct: 209 --NLISKNATRLEEADLLYRQAISMRSDYTQAYI--NRGDILIKLNRTKEAQEVYERALL 264
Query: 195 VDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
D N D NLG+ + + G Q+ + D H AL+N A LL
Sbjct: 265 YDSTNPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHEQALLNSAILL 314
>gi|449267896|gb|EMC78787.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit, partial [Columba livia]
Length = 1036
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 83 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 137
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 138 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 181
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 182 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 216
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 130/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 163 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 217
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 218 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 260
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + +C A +L P
Sbjct: 261 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVVEAEECYNTALRLCPT---- 316
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 317 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 371
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 372 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 416
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 417 PAFADAHSNLASI------HKDSGNIPEAI 440
>gi|66793439|ref|NP_001019747.1| O-linked N-acetylglucosamine (GlcNAc) transferase [Xenopus
(Silurana) tropicalis]
gi|60618530|gb|AAH90599.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
[Xenopus (Silurana) tropicalis]
Length = 1035
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 130/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 162 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 216
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 217 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 259
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + +C A +L P
Sbjct: 260 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVVDAEECYNTALRLCPT---- 315
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 316 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 370
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 371 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 415
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 416 PAFADAHSNLASI------HKDSGNIPEAI 439
>gi|66347873|ref|NP_001018115.1| O-linked N-acetylglucosamine transferase isoform 2 [Danio rerio]
gi|56967374|gb|AAW31871.1| O-GlcNAc transferase variant 2 [Danio rerio]
Length = 1052
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 161/422 (38%), Gaps = 84/422 (19%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 128
++ P A A+ LG +Y+ GQ +A+ Y A LR + D I+ A
Sbjct: 73 KQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHA----LRLKPDFIDG------YINLAAA 122
Query: 129 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 188
L+ ++GD +E + ++Q + V + LG +L GRL+ + +
Sbjct: 123 LV--AAGD-----------MEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKAC 169
Query: 189 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 248
+ PN NLG + G++ + F+ + D N A IN +L K
Sbjct: 170 YLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVL--KE 227
Query: 249 GSVLAGAGANT--------------GEGACL-DQASAVNVAKECLLAALKADPKAAHIWA 293
+ A A G AC+ + +++A + A++ P +
Sbjct: 228 ARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYC 287
Query: 294 NLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ------------ 341
NLANA G+ + +C A +L P +A +++ + + +R Q
Sbjct: 288 NLANALKEKGNVSEAEECYNTALRLCPT-----HADSLNNLANIKREQGNIEEAVQLYRK 342
Query: 342 --EPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKM 399
E + + A + +AS+L++ +Q A + + A A+ N L +M
Sbjct: 343 ALEVFPEFAAAHSNLASVLQQQGKLQ----EALMHYKEAIRISPTFADAYSNMGNTLKEM 398
Query: 400 EECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 459
++ G A +C A++ +P A +NLA+ H+ SG E
Sbjct: 399 QDVQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSGNIPE 437
Query: 460 KV 461
+
Sbjct: 438 AI 439
>gi|410914070|ref|XP_003970511.1| PREDICTED: LOW QUALITY PROTEIN: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
[Takifugu rubripes]
Length = 1036
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 161/422 (38%), Gaps = 84/422 (19%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 128
++ P A A+ LG +Y+ GQ +A+ Y A LR + D I+ A
Sbjct: 73 KQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHA----LRLKPDFIDG------YINLAAA 122
Query: 129 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 188
L+ ++GD +E + ++Q + V + LG +L GRL+ + +
Sbjct: 123 LV--AAGD-----------MEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKAC 169
Query: 189 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 248
+ PN NLG + G++ + F+ + D N A IN +L K
Sbjct: 170 YLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVL--KE 227
Query: 249 GSVLAGAGANT--------------GEGACL-DQASAVNVAKECLLAALKADPKAAHIWA 293
+ A A G AC+ + +++A + A++ P +
Sbjct: 228 ARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYC 287
Query: 294 NLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ------------ 341
NLANA G+ + +C A +L P +A +++ + + +R Q
Sbjct: 288 NLANALKEKGNVSEAEECYNTALRLCPT-----HADSLNNLANIKREQGNIEEAIQLYRK 342
Query: 342 --EPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKM 399
E + + A + +AS+L++ +Q A + + A A+ N L +M
Sbjct: 343 ALEVFPEFAAAHSNLASVLQQQGKLQ----EALMHYKEAIRISPTFADAYSNMGNTLKEM 398
Query: 400 EECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 459
++ G A +C A++ +P A +NLA+ H+ SG E
Sbjct: 399 QDVQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSGNIPE 437
Query: 460 KV 461
+
Sbjct: 438 AI 439
>gi|403305181|ref|XP_003943148.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Saimiri boliviensis boliviensis]
Length = 1046
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|395858889|ref|XP_003801787.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Otolemur garnettii]
Length = 1046
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|389580267|ref|ZP_10170294.1| cytochrome c biogenesis factor [Desulfobacter postgatei 2ac9]
gi|389401902|gb|EIM64124.1| cytochrome c biogenesis factor [Desulfobacter postgatei 2ac9]
Length = 763
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 135 GDNSLD-KELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLL 193
GD D +E + E+E K ++Q D + V LG +K+G+L+S+ ++ SS+
Sbjct: 37 GDEYFDAREYKKAEIE-----YKNALQIDNKDTAVLLKLGDTFMKTGQLKSAFALYSSVE 91
Query: 194 AVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK 247
+DP N + + L YF + ++ +++ KD + AL +L+ K
Sbjct: 92 KLDPENIEALVKLSRFYFLDKKLPETQARIDNILKKDPQNLDALFLKGQVLIRK 145
>gi|348516824|ref|XP_003445937.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Oreochromis niloticus]
Length = 1038
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 161/422 (38%), Gaps = 84/422 (19%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 128
++ P A A+ LG +Y+ GQ +A+ Y A LR + D I+ A
Sbjct: 73 KQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHA----LRLKPDFIDG------YINLAAA 122
Query: 129 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 188
L+ ++GD +E + ++Q + V + LG +L GRL+ + +
Sbjct: 123 LV--AAGD-----------MEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKAC 169
Query: 189 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 248
+ PN NLG + G++ + F+ + D N A IN +L K
Sbjct: 170 YLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVL--KE 227
Query: 249 GSVLAGAGANT--------------GEGACL-DQASAVNVAKECLLAALKADPKAAHIWA 293
+ A A G AC+ + +++A + A++ P +
Sbjct: 228 ARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYC 287
Query: 294 NLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ------------ 341
NLANA G+ + +C A +L P +A +++ + + +R Q
Sbjct: 288 NLANALKEKGNVSEAEECYNTALRLCPT-----HADSLNNLANIKREQGYIEEAVQLYRK 342
Query: 342 --EPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKM 399
E + + A + +AS+L++ +Q A + + A A+ N L +M
Sbjct: 343 ALEVFPEFAAAHSNLASVLQQQGKLQ----EALMHYKEAIRISPTFADAYSNMGNTLKEM 398
Query: 400 EECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 459
++ G A +C A++ +P A +NLA+ H+ SG E
Sbjct: 399 QDVQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSGNIPE 437
Query: 460 KV 461
+
Sbjct: 438 AI 439
>gi|344282024|ref|XP_003412775.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Loxodonta africana]
Length = 1036
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 162 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 216
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 217 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 259
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 260 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 315
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 316 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 370
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 371 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 415
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 416 PAFADAHSNLASI------HKDSGNIPEAI 439
>gi|327287040|ref|XP_003228237.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 3 [Anolis carolinensis]
Length = 1046
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 130/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + +C A +L P
Sbjct: 270 YEQGLIDLAIDTYKRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPT---- 325
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|149042178|gb|EDL95885.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase), isoform CRA_a [Rattus
norvegicus]
gi|149042179|gb|EDL95886.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase), isoform CRA_a [Rattus
norvegicus]
Length = 1046
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|432118087|gb|ELK37988.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit [Myotis davidii]
Length = 1046
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|66347879|ref|NP_001018117.1| O-linked N-acetylglucosamine transferase isoform 4 [Danio rerio]
gi|56967378|gb|AAW31873.1| O-GlcNAc transferase variant 4 [Danio rerio]
Length = 1036
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 161/422 (38%), Gaps = 84/422 (19%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 128
++ P A A+ LG +Y+ GQ +A+ Y A LR + D I+ A
Sbjct: 73 KQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHA----LRLKPDFIDG------YINLAAA 122
Query: 129 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 188
L+ ++GD +E + ++Q + V + LG +L GRL+ + +
Sbjct: 123 LV--AAGD-----------MEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKAC 169
Query: 189 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 248
+ PN NLG + G++ + F+ + D N A IN +L K
Sbjct: 170 YLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVL--KE 227
Query: 249 GSVLAGAGANT--------------GEGACL-DQASAVNVAKECLLAALKADPKAAHIWA 293
+ A A G AC+ + +++A + A++ P +
Sbjct: 228 ARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYC 287
Query: 294 NLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ------------ 341
NLANA G+ + +C A +L P +A +++ + + +R Q
Sbjct: 288 NLANALKEKGNVSEAEECYNTALRLCPT-----HADSLNNLANIKREQGNIEEAVQLYRK 342
Query: 342 --EPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKM 399
E + + A + +AS+L++ +Q A + + A A+ N L +M
Sbjct: 343 ALEVFPEFAAAHSNLASVLQQQGKLQ----EALMHYKEAIRISPTFADAYSNMGNTLKEM 398
Query: 400 EECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 459
++ G A +C A++ +P A +NLA+ H+ SG E
Sbjct: 399 QDVQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSGNIPE 437
Query: 460 KV 461
+
Sbjct: 438 AI 439
>gi|404497258|ref|YP_006721364.1| TPR domain-containing protein [Geobacter metallireducens GS-15]
gi|418065850|ref|ZP_12703220.1| Tetratricopeptide TPR_2 repeat protein [Geobacter metallireducens
RCH3]
gi|78194861|gb|ABB32628.1| TPR domain protein [Geobacter metallireducens GS-15]
gi|373561648|gb|EHP87879.1| Tetratricopeptide TPR_2 repeat protein [Geobacter metallireducens
RCH3]
Length = 267
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 24/177 (13%)
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
+G I + G+ + +++ ++A+DP+N D N+G+ Y +++ K F+ + D
Sbjct: 79 VGDIKFELGQYKEALAAYQRVVALDPDNSDAHVNIGLVYNSLERTQKAIKAFEKALEID- 137
Query: 232 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 291
PA + Y L YG LD+ A ++ DP A
Sbjct: 138 --PANVFAYNGLGDAWYG---------------LDEHEKAIAA---FQKGIELDPDDAAA 177
Query: 292 WANLANAYYLTGDH-RSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQL 347
NL YY G+H + +CLE A +L+P S Y S D ER ++ L
Sbjct: 178 HFNLGELYYDLGEHDEAEHECLE-AVRLDP-AFSMSYLTLGSLYMDNERVKDAIRYL 232
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 31/175 (17%), Positives = 71/175 (40%), Gaps = 21/175 (12%)
Query: 153 SKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQ 212
++ +E ++ + A + LG L + G+LQ ++ L + P++ D + +G F+
Sbjct: 26 AQFRECVEREPDNAEGYFYLGEALSEEGKLQDALKEYEKGLKLAPDDLDALTAVGDIKFE 85
Query: 213 SGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVN 272
G +++ +Q ++ D ++ A +N G +
Sbjct: 86 LGQYKEALAAYQRVVALDPDNSDAHVNI---------------------GLVYNSLERTQ 124
Query: 273 VAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 327
A + AL+ DP + L +A+Y +H + +K +L+P+ + +
Sbjct: 125 KAIKAFEKALEIDPANVFAYNGLGDAWYGLDEHEKAIAAFQKGIELDPDDAAAHF 179
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 65/174 (37%), Gaps = 23/174 (13%)
Query: 70 KMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCL 129
+ P NA +F LG G+ A+ YEK +A +L +L +
Sbjct: 34 REPDNAEGYFYLGEALSEEGKLQDALKEYEKG--------LKLAPDDLDALTAVG----- 80
Query: 130 LPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVL 189
D + E + +E L+ + + D + +GL+ R Q +I
Sbjct: 81 ----------DIKFELGQYKEALAAYQRVVALDPDNSDAHVNIGLVYNSLERTQKAIKAF 130
Query: 190 SSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL 243
L +DP N LG A++ + E++ FQ I D + AA N L
Sbjct: 131 EKALEIDPANVFAYNGLGDAWYGLDEHEKAIAAFQKGIELDPDDAAAHFNLGEL 184
>gi|31873825|emb|CAD97853.1| hypothetical protein [Homo sapiens]
Length = 1046
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|395546237|ref|XP_003774996.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit
[Sarcophilus harrisii]
Length = 1075
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 122 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 176
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 177 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 220
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 221 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 255
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 202 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 256
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 257 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 299
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 300 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 355
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 356 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 410
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 411 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 455
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 456 PAFADAHSNLASI------HKDSGNIPEAI 479
>gi|301791309|ref|XP_002930623.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 2 [Ailuropoda melanoleuca]
gi|410988810|ref|XP_004000670.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Felis catus]
gi|355708635|gb|AES03331.1| O-linked N-acetylglucosamine transferase [Mustela putorius furo]
Length = 1046
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|139948535|ref|NP_058803.2| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit [Rattus norvegicus]
gi|149042180|gb|EDL95887.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase), isoform CRA_b [Rattus
norvegicus]
gi|149042181|gb|EDL95888.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase), isoform CRA_b [Rattus
norvegicus]
Length = 1036
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 162 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 216
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 217 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 259
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 260 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 315
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 316 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 370
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 371 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 415
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 416 PAFADAHSNLASI------HKDSGNIPEAI 439
>gi|148682190|gb|EDL14137.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase), isoform CRA_a [Mus
musculus]
Length = 1036
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 162 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 216
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 217 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 259
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 260 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 315
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 316 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 370
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 371 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 415
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 416 PAFADAHSNLASI------HKDSGNIPEAI 439
>gi|327287038|ref|XP_003228236.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 2 [Anolis carolinensis]
Length = 1036
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 130/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 162 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 216
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 217 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 259
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + +C A +L P
Sbjct: 260 YEQGLIDLAIDTYKRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPT---- 315
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 316 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 370
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 371 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 415
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 416 PAFADAHSNLASI------HKDSGNIPEAI 439
>gi|195427028|ref|XP_002061581.1| GK20634 [Drosophila willistoni]
gi|194157666|gb|EDW72567.1| GK20634 [Drosophila willistoni]
Length = 935
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 68/176 (38%), Gaps = 39/176 (22%)
Query: 88 LGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEE 147
+G+ L + Y +AEE +R A+ L P++ S + P
Sbjct: 563 VGRTLNNLKRYNEAEEAYVR------------------AKALFPQAKPGVSYHARIAPNH 604
Query: 148 LEEIL----------SKLKE---------SMQSDTRQAVVWNTLGLILLKSGRLQSSISV 188
L + ++L+E SM+SD QA + G IL+K R + V
Sbjct: 605 LNVFINLANLIAKNQTRLEEADHLYRQAISMRSDYVQAYI--NRGDILMKLNRTAQAQEV 662
Query: 189 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
L D N D NLG+ + + G +Q+ F I H AL+N A LL
Sbjct: 663 YEQALLYDSENADIYYNLGVVFLEQGKSQQAQVYFNKAIELYPEHEQALLNSAILL 718
>gi|74007670|ref|XP_849392.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Canis lupus familiaris]
Length = 1046
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|409990372|ref|ZP_11273755.1| hypothetical protein APPUASWS_05554 [Arthrospira platensis str.
Paraca]
gi|409938768|gb|EKN80049.1| hypothetical protein APPUASWS_05554 [Arthrospira platensis str.
Paraca]
Length = 833
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
E ++K ++S++ + VV LG +L + R +I + + PN+ C NLG
Sbjct: 18 FNEAINKYRQSLEENPENFVVHVHLGSLLNQLNRTDEAIMEYHRSIELKPNSAYCHYNLG 77
Query: 208 IAYFQSGDMEQSAKCFQDLI 227
+AY + G +E++ +CF+ I
Sbjct: 78 LAYVKHGSLEEAEQCFRQAI 97
>gi|363732735|ref|XP_003641145.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Gallus gallus]
Length = 1045
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 130/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + +C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPT---- 325
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|348516826|ref|XP_003445938.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
3 [Oreochromis niloticus]
Length = 1064
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 161/422 (38%), Gaps = 84/422 (19%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 128
++ P A A+ LG +Y+ GQ +A+ Y A LR + D I+ A
Sbjct: 83 KQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHA----LRLKPDFIDG------YINLAAA 132
Query: 129 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 188
L+ ++GD +E + ++Q + V + LG +L GRL+ + +
Sbjct: 133 LV--AAGD-----------MEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKAC 179
Query: 189 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 248
+ PN NLG + G++ + F+ + D N A IN +L K
Sbjct: 180 YLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVL--KE 237
Query: 249 GSVLAGAGANT--------------GEGACL-DQASAVNVAKECLLAALKADPKAAHIWA 293
+ A A G AC+ + +++A + A++ P +
Sbjct: 238 ARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYC 297
Query: 294 NLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ------------ 341
NLANA G+ + +C A +L P +A +++ + + +R Q
Sbjct: 298 NLANALKEKGNVSEAEECYNTALRLCPT-----HADSLNNLANIKREQGYIEEAVQLYRK 352
Query: 342 --EPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKM 399
E + + A + +AS+L++ +Q A + + A A+ N L +M
Sbjct: 353 ALEVFPEFAAAHSNLASVLQQQGKLQ----EALMHYKEAIRISPTFADAYSNMGNTLKEM 408
Query: 400 EECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 459
++ G A +C A++ +P A +NLA+ H+ SG E
Sbjct: 409 QDVQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSGNIPE 447
Query: 460 KV 461
+
Sbjct: 448 AI 449
>gi|327287036|ref|XP_003228235.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 1 [Anolis carolinensis]
Length = 1066
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 130/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + +C A +L P
Sbjct: 270 YEQGLIDLAIDTYKRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPT---- 325
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|32307148|ref|NP_858058.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit isoform 1 [Homo sapiens]
gi|397498834|ref|XP_003820179.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Pan paniscus]
gi|426396356|ref|XP_004064413.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Gorilla gorilla gorilla]
gi|68067509|sp|O15294.3|OGT1_HUMAN RecName: Full=UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit;
AltName: Full=O-GlcNAc transferase subunit p110;
AltName: Full=O-linked N-acetylglucosamine transferase
110 kDa subunit; Short=OGT
gi|18250915|emb|CAC86128.1| UDP-N-acetylglucosamine: polypeptide-N-acetylglucosaminyl
transferase [Homo sapiens]
gi|23315618|gb|AAH38180.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase) [Homo sapiens]
gi|30268372|emb|CAD89970.1| hypothetical protein [Homo sapiens]
gi|119625691|gb|EAX05286.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase), isoform CRA_b [Homo
sapiens]
gi|410227760|gb|JAA11099.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase) [Pan troglodytes]
gi|410227764|gb|JAA11101.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase) [Pan troglodytes]
gi|410257116|gb|JAA16525.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase) [Pan troglodytes]
gi|410342219|gb|JAA40056.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase) [Pan troglodytes]
Length = 1046
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|3914191|sp|P56558.1|OGT1_RAT RecName: Full=UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit;
AltName: Full=O-GlcNAc transferase subunit p110;
AltName: Full=O-linked N-acetylglucosamine transferase
110 kDa subunit; Short=OGT
gi|1931579|gb|AAC53121.1| O-GlcNAc transferase, p110 subunit [Rattus norvegicus]
Length = 1036
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 162 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 216
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 217 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 259
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 260 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 315
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 316 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 370
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 371 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 415
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 416 PAFADAHSNLASI------HKDSGNIPEAI 439
>gi|395858891|ref|XP_003801788.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Otolemur garnettii]
Length = 1036
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 162 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 216
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 217 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 259
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 260 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 315
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 316 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 370
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 371 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 415
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 416 PAFADAHSNLASI------HKDSGNIPEAI 439
>gi|149758509|ref|XP_001493422.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Equus caballus]
gi|291407677|ref|XP_002720149.1| PREDICTED: O-linked GlcNAc transferase isoform 2 [Oryctolagus
cuniculus]
gi|296235743|ref|XP_002763023.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Callithrix jacchus]
gi|348570518|ref|XP_003471044.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 2 [Cavia porcellus]
gi|402910496|ref|XP_003917911.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Papio anubis]
gi|426257214|ref|XP_004022227.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Ovis aries]
gi|378405191|sp|P81436.2|OGT1_RABIT RecName: Full=UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit;
AltName: Full=O-GlcNAc transferase subunit p110;
AltName: Full=O-linked N-acetylglucosamine transferase
110 kDa subunit; Short=OGT
gi|355757457|gb|EHH60982.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit [Macaca fascicularis]
gi|380817296|gb|AFE80522.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit isoform 1 [Macaca mulatta]
gi|383422239|gb|AFH34333.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit isoform 1 [Macaca mulatta]
gi|384949880|gb|AFI38545.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit isoform 1 [Macaca mulatta]
Length = 1046
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|148230096|ref|NP_001087833.1| O-linked N-acetylglucosamine (GlcNAc) transferase [Xenopus laevis]
gi|51949982|gb|AAH82353.1| Ogt-prov protein [Xenopus laevis]
Length = 1063
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 130/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + +C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVVDAEECYNTALRLCPT---- 325
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|195025667|ref|XP_001986102.1| GH21177 [Drosophila grimshawi]
gi|193902102|gb|EDW00969.1| GH21177 [Drosophila grimshawi]
Length = 956
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 68/176 (38%), Gaps = 39/176 (22%)
Query: 88 LGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEE 147
+G+ + YE+AE+ +R A+ L P++ S + P
Sbjct: 587 VGRTYNNLKRYEEAEQAYMR------------------AKALFPQAKAGVSYHARIAPNH 628
Query: 148 LEEIL----------SKLKE---------SMQSDTRQAVVWNTLGLILLKSGRLQSSISV 188
L + ++L+E SM+SD QA + G IL+K R + V
Sbjct: 629 LNVFINLANLISKNQTRLEEADHLYRQAISMRSDYVQAYI--NRGDILMKLNRTAQAQEV 686
Query: 189 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
L D N D NLG+ + + G +Q+ F I H AL+N A LL
Sbjct: 687 YEQALLYDSENADIYYNLGVVFLEQGKSQQAHVYFNKAIELYPEHEQALLNSAILL 742
>gi|147899141|ref|NP_001091539.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit [Bos taurus]
gi|146186901|gb|AAI40543.1| OGT protein [Bos taurus]
gi|296470806|tpg|DAA12921.1| TPA: O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase) [Bos taurus]
Length = 1036
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 162 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 216
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 217 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 259
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 260 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 315
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 316 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 370
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 371 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 415
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 416 PAFADAHSNLASI------HKDSGNIPEAI 439
>gi|196232458|ref|ZP_03131311.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
gi|196223530|gb|EDY18047.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
Length = 747
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 13/163 (7%)
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ------- 224
LG+ +++GR + ++++L+ + A+ PN+ NLG AY G E++ F+
Sbjct: 44 LGVAAMQTGRAELAVNLLNRVAALVPNHPAVHSNLGEAYRGLGKFEEAVASFRRALQLKP 103
Query: 225 DLILKDQNHPAALINYAAL--LLCKYGSVLA----GAGANTGEGACLDQASAVNVAKECL 278
D +L N L+ + L + Y VL A+ G L + + A E L
Sbjct: 104 DDVLAQYNLGNVLVEWGKLEEAIAAYRRVLTLKPDYVDAHNNLGIALARQGVMTEATEVL 163
Query: 279 LAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
AL+ P A W N G + + +A +L PN
Sbjct: 164 RRALQLAPADAGAWNNFGIVLAEQGRFGEAVEAYRRALELAPN 206
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 21/175 (12%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+ EE ++ + ++Q + LG +L++ G+L+ +I+ +L + P+ D NL
Sbjct: 87 KFEEAVASFRRALQLKPDDVLAQYNLGNVLVEWGKLEEAIAAYRRVLTLKPDYVDAHNNL 146
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
GIA + G M ++ + + AL L A AGA G L
Sbjct: 147 GIALARQGVMTEATEVLRR----------------ALQLAP-----ADAGAWNNFGIVLA 185
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
+ A E AL+ P N NA G S+ +A +L P+
Sbjct: 186 EQGRFGEAVEAYRRALELAPNQPEAHNNFGNACKELGQFESAVAAYRRAVELRPD 240
>gi|126342737|ref|XP_001362233.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Monodelphis domestica]
Length = 1045
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|428315765|ref|YP_007113647.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428239445|gb|AFZ05231.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 1290
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 171 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 230
TLG L G+ +++I S L + PN + N+G YF+ G +E++ +Q I
Sbjct: 516 TLGNALQAEGKTEAAIRSYSQALVLQPNFAEVRANIGSMYFKMGRLEEAIAHYQQAIALS 575
Query: 231 QNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPK--A 288
+ LAGA N G+ Q + A C + +P+
Sbjct: 576 PD-------------------LAGAHWNLGK--VYHQHGNIEAAIACFKRTSELNPQLVG 614
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLS 348
A NL N + G + +C EKA ++P+ +A A I A RSQ+
Sbjct: 615 ADFHFNLGNRLFSQGKRDEAIECYEKAIAIKPD-----WAEAYGNIGSA-RSQQ------ 662
Query: 349 WAGNEMASILREGDPVQIEP 368
GN A+I V ++P
Sbjct: 663 --GNLEAAIAYYQKAVALKP 680
>gi|89886173|ref|NP_001034837.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit [Sus scrofa]
gi|122142735|sp|Q27HV0.1|OGT1_PIG RecName: Full=UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit;
AltName: Full=O-GlcNAc transferase subunit p110;
AltName: Full=O-linked N-acetylglucosamine transferase
110 kDa subunit; Short=OGT
gi|89114276|gb|ABD61726.1| O-linked N-acetylglucosamine transferase [Sus scrofa]
Length = 1046
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|32307150|ref|NP_858059.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit isoform 2 [Homo sapiens]
gi|397498836|ref|XP_003820180.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Pan paniscus]
gi|426396358|ref|XP_004064414.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Gorilla gorilla gorilla]
gi|15680175|gb|AAH14434.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase) [Homo sapiens]
gi|18250914|emb|CAC86127.1| UDP-N-acatylglucosamine: polypeptide-N-acetylglucosaminyl
transferase [Homo sapiens]
gi|119625692|gb|EAX05287.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase), isoform CRA_c [Homo
sapiens]
gi|123993895|gb|ABM84549.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase) [synthetic construct]
gi|124000677|gb|ABM87847.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase) [synthetic construct]
gi|224487755|dbj|BAH24112.1| O-linked N-acetylglucosamine (GlcNAc) transferase [synthetic
construct]
gi|410227762|gb|JAA11100.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase) [Pan troglodytes]
gi|410257114|gb|JAA16524.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase) [Pan troglodytes]
Length = 1036
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 162 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 216
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 217 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 259
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 260 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 315
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 316 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 370
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 371 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 415
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 416 PAFADAHSNLASI------HKDSGNIPEAI 439
>gi|403359316|gb|EJY79316.1| TPR repeat-containing protein [Oxytricha trifallax]
Length = 1076
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 81/178 (45%), Gaps = 29/178 (16%)
Query: 64 LVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSY---EKAEEILLRCEADIARPELLSL 120
+ +A KNA A F L ++Y+ G LKA +Y +KA++ + + ++A
Sbjct: 126 FLKIAINEEKNATALFNLAVIYEEKGDKLKAKEAYAECQKADQSHYKSKVNLA------- 178
Query: 121 VQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSG 180
+L LDKE + E + +E+++ + + A + + +G+ L ++G
Sbjct: 179 --------IL--------LDKEGKGHEANQFY---QEALKQNPKDAKIHHNMGINLKRAG 219
Query: 181 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALI 238
+L ++S + +DP+N + N GI Y D + + I K++ + A +
Sbjct: 220 KLDEALSHYKKAMELDPDNSTVLYNTGILYNIKSDYHNAVDVLEKSISKNKENVYAFL 277
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 42/97 (43%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
E E+ + K +++ D A + LG +IS L ++P++ +C N+
Sbjct: 938 EFEKAIVNYKRTIELDPYNAPAFYNLGNAYYMINEFDKAISSYGQALKLNPDSAECHFNI 997
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL 243
AY GD + + K ++D + D + +N +
Sbjct: 998 ASAYNDKGDFDNAIKHYKDSLQYDAKNSETFVNLGTI 1034
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 86/206 (41%), Gaps = 23/206 (11%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
LE ELE+ LK+ +Q + + + ++G +L ++G +++ L +P
Sbjct: 798 LEKGELEKAAEYLKKCLQLNPKYVLGLVSMGNLLFETGHSKTAAKYHQQALKYNPREIQA 857
Query: 203 IGNLGIAYFQSGDMEQSAKCFQ-----DLILKDQNHPAA----LINYAALLLCKYGSVL- 252
+ LG A + G+ +++ + ++ D L D ++ LI L + Y +
Sbjct: 858 LIGLGNALYDMGEPKEAIEYYKKALELDKGLSDVHYNLGNALYLIENTDLAIQHYKIAID 917
Query: 253 -----AGAGANTGEGACLD---QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGD 304
+ N G C+ + + VN + ++ DP A + NL NAYY+ +
Sbjct: 918 LNPNKPESYYNLGNALCIKAEFEKAIVNYKR-----TIELDPYNAPAFYNLGNAYYMINE 972
Query: 305 HRSSGKCLEKAAKLEPNCMSTRYAVA 330
+ +A KL P+ + +A
Sbjct: 973 FDKAISSYGQALKLNPDSAECHFNIA 998
>gi|403305183|ref|XP_003943149.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Saimiri boliviensis boliviensis]
Length = 1036
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 162 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 216
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 217 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 259
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 260 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 315
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 316 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 370
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 371 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 415
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 416 PAFADAHSNLASI------HKDSGNIPEAI 439
>gi|377657074|gb|AFB74087.1| O-linked N-acetylglucosamine transferase [Bubalus bubalis]
Length = 1046
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|354567262|ref|ZP_08986432.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
gi|353543563|gb|EHC13021.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
Length = 224
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E+ +E + + +E+++ D++ A+ N +GL+ + + +I+ + LA++PN D + N
Sbjct: 112 EKKDEAIKQYQEAIRLDSKYALAHNGIGLVFASQEQWEEAIAEYNKALAINPNYGDALTN 171
Query: 206 LGIAYFQSGDMEQSAKCFQDLI--LKDQNHP 234
L A+++ G E++ + + K QN P
Sbjct: 172 LAQAFWEVGKREEAIASLEKALSAFKAQNKP 202
>gi|386398767|ref|ZP_10083545.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Bradyrhizobium sp. WSM1253]
gi|385739393|gb|EIG59589.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Bradyrhizobium sp. WSM1253]
Length = 461
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 16/209 (7%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+L + L ++++ + + + + G++ RL +++ + + P+N +
Sbjct: 122 DLNRAAADLSKAIELNPQDSESYELRGVVYTNQRRLDRALADYDQAIKLKPDNAQAWSDR 181
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G+ Y+ GD E + + + + D N P + N A K G L + A+ GE LD
Sbjct: 182 GVTYYLGGDNENAIRDLSEALRLDPNRPRSYTNRGA-AYKKLGQ-LERSVADDGEAIRLD 239
Query: 267 QASAVNVAKECL-LAALKADPKA-------------AHIWANLANAYYLTGDHRSSGKCL 312
L LAA+ KA + +AN ++Y+L G+ ++
Sbjct: 240 PKVPEYYDNRGLSLAAMGEYDKAIADYDQALRLAPRPNFFANRGDSYHLKGELGAALSDY 299
Query: 313 EKAAKLEPNCMSTRYAVAVSRIKDAERSQ 341
E A KLEPN T AV K ER +
Sbjct: 300 EAALKLEPNFAQTYNNRAVLYKKMGERKK 328
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 81/207 (39%), Gaps = 19/207 (9%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
L+ L+ ++++ A W+ G+ G +++I LS L +DPN N
Sbjct: 155 RRLDRALADYDQAIKLKPDNAQAWSDRGVTYYLGGDNENAIRDLSEALRLDPNRPRSYTN 214
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVLAGAG------- 256
G AY + G +E+S + I D P N L + +Y +A
Sbjct: 215 RGAAYKKLGQLERSVADDGEAIRLDPKVPEYYDNRGLSLAAMGEYDKAIADYDQALRLAP 274
Query: 257 -----ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 311
AN G+ L + A AALK +P A + N A Y G+ + +
Sbjct: 275 RPNFFANRGDSYHL--KGELGAALSDYEAALKLEPNFAQTYNNRAVLYKKMGERKKALAD 332
Query: 312 LEKAAKLEP---NCMSTRYAVAVSRIK 335
E A +L+P N + R A+ +K
Sbjct: 333 YETALRLDPGNDNAAAGRRAMIAEIVK 359
>gi|406982865|gb|EKE04132.1| hypothetical protein ACD_20C00104G0026 [uncultured bacterium]
Length = 356
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 85/211 (40%), Gaps = 15/211 (7%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
EL +++ ++ +Q + LG L SG+L+ S+ LL++D N + N+
Sbjct: 7 ELNKVIEGARKKIQETPDNVEAYFVLGTTLALSGKLEESLKTYRELLSIDSVNVQALVNI 66
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVLAG---------- 254
G F G ++++ ++ I + +A +N A + KY + G
Sbjct: 67 GSTLFLMGKVDEAIDNYKKAIELNPESVSAYMNLANTYAEIGKYDEAIEGYKKSIEISPD 126
Query: 255 -AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
A + G + A E +ALK DP+ + N+A+ Y + + +
Sbjct: 127 NIDAYSSLGLAFQDLRKYDEAMENYRSALKLDPENYEHYVNVASVYMQKTQFEDAIEFYK 186
Query: 314 KAAKLEPNCMSTRYAV--AVSRIKDAERSQE 342
KA N + + A+S +K +S E
Sbjct: 187 KAVNFNNNDYKSLICIANALSELKKYNKSFE 217
>gi|149758511|ref|XP_001493438.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Equus caballus]
gi|291407675|ref|XP_002720148.1| PREDICTED: O-linked GlcNAc transferase isoform 1 [Oryctolagus
cuniculus]
gi|296235745|ref|XP_002763024.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Callithrix jacchus]
gi|348570516|ref|XP_003471043.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 1 [Cavia porcellus]
gi|402910498|ref|XP_003917912.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Papio anubis]
gi|426257212|ref|XP_004022226.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Ovis aries]
gi|380817298|gb|AFE80523.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit isoform 2 [Macaca mulatta]
gi|383422241|gb|AFH34334.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit isoform 2 [Macaca mulatta]
Length = 1036
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 162 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 216
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 217 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 259
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 260 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 315
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 316 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 370
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 371 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 415
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 416 PAFADAHSNLASI------HKDSGNIPEAI 439
>gi|449499306|ref|XP_002189786.2| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit, partial
[Taeniopygia guttata]
Length = 1038
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 85 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 139
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 140 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 183
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 184 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 218
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 130/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 165 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 219
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 220 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 262
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + +C A +L P
Sbjct: 263 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVVEAEECYNTALRLCPT---- 318
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 319 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 373
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 374 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 418
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 419 PAFADAHSNLASI------HKDSGNIPEAI 442
>gi|118395433|ref|XP_001030066.1| SLEI family protein [Tetrahymena thermophila]
gi|89284354|gb|EAR82403.1| SLEI family protein [Tetrahymena thermophila SB210]
Length = 2397
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 123/324 (37%), Gaps = 32/324 (9%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
E ++ L ++ +Q + ++AV +N +GL+ K +I + L +DPN N
Sbjct: 2012 EYDQALECYQKIIQINPQKAVAYNNIGLVHYKQKMDDKAIEYYNKALELDPNYDLSYYNS 2071
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G+ Y Q D +++ +C++ +LK +N L + G D
Sbjct: 2072 GLVYEQKKDFDKALECYKK-VLKINPKDKKTLNRINL-------IKKNNGDKIDNQTKED 2123
Query: 267 QASAVNVAKECLLAAL--KADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS 324
+ S + K D + A + N YY + KCL+KA +++P
Sbjct: 2124 EVSEPEDYDDDYEDGDEQKKDLQTAEDYYNQGFKYYNQMKDQECIKCLKKAIEIDP---- 2179
Query: 325 TRYAVAVSRI----KDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQK 380
+Y+ A ++ ++ E+ +E E A E P ++ A QK
Sbjct: 2180 -KYSEAYDKLGLVYEENEQFEEAIECYKKAI--------EHKPNSLDSISALMTLYINQK 2230
Query: 381 THHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWAN 440
E + + + E A E S V+ A A++ DPK + +
Sbjct: 2231 MTEEAKEFYNSVQQSADIYYELARVYEDK-----SMVDEAISSHKKAIELDPKYVNSYIQ 2285
Query: 441 LANAYYLTGDHRSSGKCLEKVLMV 464
L N Y + + + +K+L +
Sbjct: 2286 LGNIYSDKASYEQATEYYQKILEI 2309
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 78/191 (40%), Gaps = 13/191 (6%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
L+ + L+E ++ L+++++ D + A LG K +I + +DPN +
Sbjct: 83 LQKKMLDEAVACLQKALEIDPKSAKAHERLGFAYKKQNLTNKAIQCFKKAIEIDPNFTEA 142
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY---GSVLAGAGANT 259
NLG AY ++Q+ C+++++ D N+ I+ A Y S+ A
Sbjct: 143 HHNLGFAYESKNMIDQAYDCYKNILNIDPNYVNTYISLARNYYTDYKIEDSIKYLKKAIE 202
Query: 260 GEGACLD----------QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 309
+ C++ S A + A++ DPK + NL YY +
Sbjct: 203 IDQNCVEAYERLGYVYQNTSKKEEAIKHYKKAIEIDPKYFNAQFNLGLLYYEEQKDDEAL 262
Query: 310 KCLEKAAKLEP 320
+KA ++ P
Sbjct: 263 TYFQKAIEINP 273
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 103/273 (37%), Gaps = 42/273 (15%)
Query: 71 MPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLL 130
+PK A++ LG Y+ A+ +Y+KA +Q+ +
Sbjct: 1156 VPKCTEAYYELGRTYEEQNMLDDAIVNYKKA-------------------IQLDPSHINS 1196
Query: 131 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
G++ LDK + + L K+ ++ D ++AV +N +G++ K G +++
Sbjct: 1197 YIYLGNSYLDKL----QFDLALDSYKKIIEIDPKKAVAYNNVGVVYNKQGLYDAALEYYK 1252
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 250
L VDP+ + N G+ Y + G+ +++ + F + + +L + K S
Sbjct: 1253 KALDVDPHYELALFNSGLVYEKKGEQDKALEFFYKTLEINPTEKKSLNRIKVIQQNKQTS 1312
Query: 251 -------------------VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 291
VL+ A EG Q + A ECL AL+ DP
Sbjct: 1313 KDDKEFSLFKDIFKKDKKKVLSTADDYYYEGFDYYQQQNDDKAIECLKKALEIDPNFYEA 1372
Query: 292 WANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS 324
+ L Y S +KA +L P S
Sbjct: 1373 YDKLGLVYKEKKMFDESITHYKKAFELNPKFYS 1405
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 57/302 (18%), Positives = 111/302 (36%), Gaps = 52/302 (17%)
Query: 49 SSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC 108
++S +EE + K + PK +A F LGL+Y + +A++ ++KA EI +
Sbjct: 220 NTSKKEEAIKHYKKAI----EIDPKYFNAQFNLGLLYYEEQKDDEALTYFQKAIEINPKS 275
Query: 109 EADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVV 168
+ LV H + E L K+++ D +
Sbjct: 276 PDSYNN---IGLVYYHKNM--------------------ITEALEYYKKALDVDPQYHKA 312
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ L K +Q++I + ++P + NLG + ++ +CF+ +I
Sbjct: 313 YHNSALAYEKQNLIQNAIESYKKSIEMNPKFLKSLTNLGDLCIEQNLADEGIECFKKIIQ 372
Query: 229 ------------------KDQNHPAALINYAALLLC-KYGSVLAGAGANTGEGACLDQAS 269
KD N A + L +Y + G + D+A
Sbjct: 373 IDPYSHYDHFQLAFLYQDKDMNEEAVKTYKKVIELNPEYTNAYLNLGIIYSDQKMFDEAQ 432
Query: 270 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAV 329
+ C A++ DP + A Y L G+ + +C +KA ++ P + ++
Sbjct: 433 S------CFKKAIQVDPNYYKAYYRSAEVYELQGNTTEAIECYKKAIEINPKYTYSYVSL 486
Query: 330 AV 331
A+
Sbjct: 487 AM 488
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/157 (19%), Positives = 70/157 (44%), Gaps = 23/157 (14%)
Query: 71 MPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLL 130
+PK H+ LG +YQ +A+ SY++A E+ + + + +Q+
Sbjct: 1687 VPKCVETHYHLGRVYQDQNMLDEAIGSYQRAIELDSKY--------INAYIQL------- 1731
Query: 131 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
G+ LDK + ++ L K+ ++ D ++ V +N +GL+ ++ +
Sbjct: 1732 ----GNAYLDKPM----FDQALETYKKILEIDPQKPVAYNNIGLVYFDQNMNDEALEQFN 1783
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
L ++P + N G+ Y + +++ +C+ ++
Sbjct: 1784 KALEINPKYELSLYNSGLVYERKNQTDKALECYNKVL 1820
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 77/424 (18%), Positives = 156/424 (36%), Gaps = 82/424 (19%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
PK+A AH LG Y++ KA+ ++KA EI P + + HH
Sbjct: 103 PKSAKAHERLGFAYKKQNLTNKAIQCFKKAIEI---------DP---NFTEAHHNLGFAY 150
Query: 132 ESSGDNSLDK---------ELEPE----------------ELEEILSKLKESMQSDTRQA 166
ES N +D+ ++P ++E+ + LK++++ D
Sbjct: 151 ESK--NMIDQAYDCYKNILNIDPNYVNTYISLARNYYTDYKIEDSIKYLKKAIEIDQNCV 208
Query: 167 VVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDL 226
+ LG + + + + +I + +DP + NLG+ Y++ +++ FQ
Sbjct: 209 EAYERLGYVYQNTSKKEEAIKHYKKAIEIDPKYFNAQFNLGLLYYEEQKDDEALTYFQKA 268
Query: 227 ILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADP 286
I + P + Y ++ G + + A E AL DP
Sbjct: 269 IEINPKSPDS-----------YNNI----------GLVYYHKNMITEALEYYKKALDVDP 307
Query: 287 KAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQ 346
+ + N A AY +++ + +K+ ++ P ++ +++ + D Q
Sbjct: 308 QYHKAYHNSALAYEKQNLIQNAIESYKKSIEMNP-----KFLKSLTNLGDLCIEQ----N 358
Query: 347 LSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAG 406
L+ G E + + DP A + + E ++ K+ E
Sbjct: 359 LADEGIECFKKIIQIDPYSHYDHFQLAFLYQDKDMNEEAVKTYK-------KVIELNPEY 411
Query: 407 ESAFLD------QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 460
+A+L+ + A+ C A++ DP + A Y L G+ + +C +K
Sbjct: 412 TNAYLNLGIIYSDQKMFDEAQSCFKKAIQVDPNYYKAYYRSAEVYELQGNTTEAIECYKK 471
Query: 461 VLMV 464
+ +
Sbjct: 472 AIEI 475
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 64/167 (38%), Gaps = 25/167 (14%)
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
LK++++ D + + ++ LGL+ ++ + + +I + PN+ D I L Y
Sbjct: 2171 LKKAIEIDPKYSEAYDKLGLVYEENEQFEEAIECYKKAIEHKPNSLDSISALMTLYINQK 2230
Query: 215 DMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 274
M + AK F Y SV A + S V+ A
Sbjct: 2231 -MTEEAKEF------------------------YNSVQQSADIYYELARVYEDKSMVDEA 2265
Query: 275 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
A++ DPK + + L N Y + + + +K ++EPN
Sbjct: 2266 ISSHKKAIELDPKYVNSYIQLGNIYSDKASYEQATEYYQKILEIEPN 2312
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 71/210 (33%), Gaps = 55/210 (26%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLI-------------------------------- 175
LEE + K+ ++ D LGLI
Sbjct: 20 LEEAIECYKKVLEVDASNVEALYNLGLIHQSKKQHDESLEFLNRAIEKNPNYLNAYICKA 79
Query: 176 --LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNH 233
L+ L +++ L L +DP + LG AY + ++ +CF+ I D N
Sbjct: 80 ENYLQKKMLDEAVACLQKALEIDPKSAKAHERLGFAYKKQNLTNKAIQCFKKAIEIDPNF 139
Query: 234 PAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWA 293
A+ G + + ++ A +C L DP + +
Sbjct: 140 ---------------------TEAHHNLGFAYESKNMIDQAYDCYKNILNIDPNYVNTYI 178
Query: 294 NLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
+LA YY S K L+KA +++ NC+
Sbjct: 179 SLARNYYTDYKIEDSIKYLKKAIEIDQNCV 208
>gi|308198147|ref|XP_001386876.2| glucose repression mediator protein [Scheffersomyces stipitis CBS
6054]
gi|149388888|gb|EAZ62853.2| glucose repression mediator protein [Scheffersomyces stipitis CBS
6054]
Length = 815
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 74/187 (39%), Gaps = 40/187 (21%)
Query: 168 VWNTLGLILLKSGRLQSSISVLSSLLAVDPN---NCDCIGNLGIAYFQSGDMEQSAKCFQ 224
+W+ +G++ + G L+ + +L +DPN + LGI Y G ++ + +CFQ
Sbjct: 180 LWHGIGILYDRYGSLEYAEEAFVRVLELDPNFDKANEIYFRLGIIYKHQGKLQSALECFQ 239
Query: 225 DLILKDQNHPAALIN---------------------YAALLLC--KYGSVLAGAG----- 256
IL + HP + Y +L ++ VL G
Sbjct: 240 -YILNNPPHPLTQPDVWFQIGSVLEQQKDWVGAKDAYEKVLQVNPQHAKVLQQLGCLYSQ 298
Query: 257 --------ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSS 308
+ G GA +N+A + L+ +L+ D AH W L + + GD ++
Sbjct: 299 AESSPSTPSQNGSGAAQPFQQDLNIALKYLMQSLEIDNSDAHSWYYLGRVHMIRGDFNAA 358
Query: 309 GKCLEKA 315
+ ++A
Sbjct: 359 YEAFQQA 365
>gi|118089398|ref|XP_001232519.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Gallus gallus]
Length = 1035
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 130/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 162 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 216
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 217 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 259
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + +C A +L P
Sbjct: 260 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPT---- 315
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 316 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 370
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 371 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 415
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 416 PAFADAHSNLASI------HKDSGNIPEAI 439
>gi|338811928|ref|ZP_08624129.1| TPR repeat-containing protein [Acetonema longum DSM 6540]
gi|337276073|gb|EGO64509.1| TPR repeat-containing protein [Acetonema longum DSM 6540]
Length = 298
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 63/163 (38%), Gaps = 26/163 (15%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
W + G + + G +++ + +A++P N + N GIAY GD + + + I
Sbjct: 113 WRSRGDVYAEKGDYDKAVTDYTQFIALEPQNAEAHNNRGIAYSDKGDYDTAITDYTRAI- 171
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
L KY A A G + A + A+ +P+
Sbjct: 172 --------------ALQPKY------ATAYYNRGIAYKNKGDYDKAIDDYSQAIALNPRD 211
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 331
A + N ANAY + GD+ + A L+P+ YAVA
Sbjct: 212 ASAYNNRANAYVMKGDYDKAITDYSLATTLDPD-----YAVAY 249
>gi|301791307|ref|XP_002930622.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 1 [Ailuropoda melanoleuca]
gi|410988812|ref|XP_004000671.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Felis catus]
Length = 1036
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 162 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 216
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 217 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 259
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 260 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 315
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 316 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 370
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 371 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 415
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 416 PAFADAHSNLASI------HKDSGNIPEAI 439
>gi|297304121|ref|XP_002806323.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit [Macaca
mulatta]
Length = 963
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|443328425|ref|ZP_21057023.1| tetratricopeptide repeat protein [Xenococcus sp. PCC 7305]
gi|442792010|gb|ELS01499.1| tetratricopeptide repeat protein [Xenococcus sp. PCC 7305]
Length = 1259
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 106/289 (36%), Gaps = 40/289 (13%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
A + T G IL K G++ +IS L V P + NLG Y Q + +S +Q
Sbjct: 166 APAYKTKGNILQKIGKIAEAISCYHQALGVAPEFVEVYANLGGIYAQQQEWSKSVDAYQR 225
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 285
I N A N A V G AC QA + L KA
Sbjct: 226 AIEIKPNFAGAYRNLA--------KVWYKQGQKEKAIACTYQALS--------LEPEKAS 269
Query: 286 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTE 345
P+ H N+ G + +C E+A KL+P ++ VA ++ + Q +
Sbjct: 270 PQIHH---NIGVELLQLGQIEEASQCFERAVKLDP-----QFIVAYQKLAETLEEQGKWQ 321
Query: 346 QLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKT----------HHEVAAAFETEENE 395
Q + + + + E + EPP + Q+T ++ A E +
Sbjct: 322 QAALSYRQALVLSPEPSEITAEPP----ATPSHQETEVNLLSQGTGQDKIVQAIERYQLA 377
Query: 396 LSKMEECA--GAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLA 442
++K + A A + Q A A+K DP A ++ NLA
Sbjct: 378 IAKEPDSAEHYANLGSLYAQKQQWEEAITVYQQAIKVDPNFAGVYRNLA 426
>gi|332881964|ref|ZP_08449605.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332680090|gb|EGJ53046.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 449
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 61/159 (38%), Gaps = 21/159 (13%)
Query: 180 GRLQSSISVLSSLLAVDPNNCD----CIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
G+ + + L+ L +P C+ C+G L I D++ + +CF I+ D
Sbjct: 179 GQTAEAKTFLNDYLDQNPY-CEIAWYCLGKLYIT---DDDLKNALRCFDFAIISDDTFTG 234
Query: 236 ALINYAALL---------LCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAAL 282
A A +L + Y L A G C ++ A+E A
Sbjct: 235 AYFEKARVLEAMEQYEKAIENYKITLTLDDPSALVYLHIGRCYEKMRNDQKAEEYYFRAT 294
Query: 283 KADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
DP+ W LA+ YYL H + K ++K EPN
Sbjct: 295 HEDPQLGKAWITLADFYYLRRKHDKALKYIQKLLSFEPN 333
>gi|74007686|ref|XP_538075.2| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Canis lupus familiaris]
Length = 1036
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 162 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 216
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 217 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 259
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 260 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 315
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 316 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 370
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 371 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 415
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 416 PAFADAHSNLASI------HKDSGNIPEAI 439
>gi|410671866|ref|YP_006924237.1| hypothetical protein Mpsy_2668 [Methanolobus psychrophilus R15]
gi|409170994|gb|AFV24869.1| hypothetical protein Mpsy_2668 [Methanolobus psychrophilus R15]
Length = 368
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 55/300 (18%), Positives = 111/300 (37%), Gaps = 46/300 (15%)
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
L +S +I+ + ++ DP D + G + + ++ C+ ++I D +
Sbjct: 34 LYRSNMYYEAIASVDNIQVDDPYYIDALNYKGESLYALSRYNEAIGCYNEVIEMDPENSK 93
Query: 236 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 295
A +N LL Y D+A A C A++ADP+ W+
Sbjct: 94 AWVNKGDSLLEIYE---------------YDEADA------CYGRAIEADPEFDEAWSGK 132
Query: 296 ANAYYLTGDHRSSGKCLEKAAKL-------EPNCMSTRYAVAVSRIKDAERSQEPTEQLS 348
YL G + S + EK+ + +P+ Y +S S
Sbjct: 133 GITLYLNGSYNESAEFFEKSIEYSDKKITSDPDSFEAWYNKGIS--------------FS 178
Query: 349 WAGNEMASILREGDPVQIEPPIA--W--AGFAAVQKTHHEVAAAFETEENELSKMEECAG 404
+ G S+ +++ P A W G+ ++ ++ A E++ + A
Sbjct: 179 YIGRTNESLECYEKAIELNPEYANAWRGKGYELIELGRYDEAIQCYDNAIEINPEDAYAW 238
Query: 405 AGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 464
G+ L + + A +C A++ P+ A+ W N + + + +C +KV+ +
Sbjct: 239 VGKGYVLYKFDRYDEAIKCFDKAIEIHPEDAYAWGNKGYMLGILERYDEAIECYDKVIEI 298
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 75/191 (39%), Gaps = 28/191 (14%)
Query: 137 NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGR-------LQSSISVL 189
N D LE E +E + ++++D W+ G+ L +G + SI
Sbjct: 97 NKGDSLLEIYEYDEADACYGRAIEADPEFDEAWSGKGITLYLNGSYNESAEFFEKSIEYS 156
Query: 190 SSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYG 249
+ DP++ + N GI++ G +S +C++ I + +
Sbjct: 157 DKKITSDPDSFEAWYNKGISFSYIGRTNESLECYEKAIELNPEY---------------- 200
Query: 250 SVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 309
A A G+G L + + A +C A++ +P+ A+ W Y + +
Sbjct: 201 -----ANAWRGKGYELIELGRYDEAIQCYDNAIEINPEDAYAWVGKGYVLYKFDRYDEAI 255
Query: 310 KCLEKAAKLEP 320
KC +KA ++ P
Sbjct: 256 KCFDKAIEIHP 266
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 33/171 (19%), Positives = 64/171 (37%), Gaps = 21/171 (12%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E L +++++ + A W G L++ GR +I + + ++P + G
Sbjct: 185 ESLECYEKAIELNPEYANAWRGKGYELIELGRYDEAIQCYDNAIEINPEDAYAWVGKGYV 244
Query: 210 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 269
++ +++ KCF I + HP A A +G L
Sbjct: 245 LYKFDRYDEAIKCFDKAI---EIHPE------------------DAYAWGNKGYMLGILE 283
Query: 270 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
+ A EC ++ DP+ W A Y G + + +C + A ++ P
Sbjct: 284 RYDEAIECYDKVIEIDPEFTSAWKEKGYALYKLGRYDEAIQCYDNAIEINP 334
>gi|356960818|ref|ZP_09063800.1| TPR repeat-containing protein [gamma proteobacterium SCGC
AAA001-B15]
Length = 286
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 97/223 (43%), Gaps = 35/223 (15%)
Query: 49 SSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC 108
S+ +E + +++T + + P + + G+ Y+ +G+ +AV S+EKA L
Sbjct: 19 SNGQIQEALDTVET----LTKDYPNEPLLYNISGICYKTIGKLDEAVKSFEKA----LAI 70
Query: 109 EADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVV 168
+ D A ++H+ L + G +L+ + K++++ A
Sbjct: 71 KPDYA--------EVHYNLGLTLQDLG-----------QLDAAVKCYKKALEIKPDYANA 111
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
N LG+ L G+L +++ +A+ P+ + NLG + + G M+ + KC++ +
Sbjct: 112 CNNLGVTLQDLGQLDAAVKSYEQAIAIKPDFVEAYYNLGGTFQELGQMDAAVKCYEKALA 171
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 271
++ A N G+VL G G C +QA A+
Sbjct: 172 IKPDYAEAHYN--------LGNVLKNLGQLNGAVKCYEQALAI 206
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 35/191 (18%), Positives = 72/191 (37%), Gaps = 21/191 (10%)
Query: 137 NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVD 196
NSL +++E L ++ + + +++N G+ G+L ++ LA+
Sbjct: 12 NSLIALYSNGQIQEALDTVETLTKDYPNEPLLYNISGICYKTIGKLDEAVKSFEKALAIK 71
Query: 197 PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAG 256
P+ + NLG+ G ++ + KC++ + ++ A
Sbjct: 72 PDYAEVHYNLGLTLQDLGQLDAAVKCYKKALEIKPDY---------------------AN 110
Query: 257 ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAA 316
A G L ++ A + A+ P + NL + G ++ KC EKA
Sbjct: 111 ACNNLGVTLQDLGQLDAAVKSYEQAIAIKPDFVEAYYNLGGTFQELGQMDAAVKCYEKAL 170
Query: 317 KLEPNCMSTRY 327
++P+ Y
Sbjct: 171 AIKPDYAEAHY 181
>gi|332265872|ref|XP_003281937.1| PREDICTED: LOW QUALITY PROTEIN: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit
[Nomascus leucogenys]
Length = 1050
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
>gi|348516828|ref|XP_003445939.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
4 [Oreochromis niloticus]
Length = 1054
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 161/422 (38%), Gaps = 84/422 (19%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 128
++ P A A+ LG +Y+ GQ +A+ Y A LR + D I+ A
Sbjct: 73 KQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHA----LRLKPDFIDG------YINLAAA 122
Query: 129 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 188
L+ ++GD +E + ++Q + V + LG +L GRL+ + +
Sbjct: 123 LV--AAGD-----------MEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKAC 169
Query: 189 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 248
+ PN NLG + G++ + F+ + D N A IN +L K
Sbjct: 170 YLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVL--KE 227
Query: 249 GSVLAGAGANT--------------GEGACL-DQASAVNVAKECLLAALKADPKAAHIWA 293
+ A A G AC+ + +++A + A++ P +
Sbjct: 228 ARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYC 287
Query: 294 NLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ------------ 341
NLANA G+ + +C A +L P +A +++ + + +R Q
Sbjct: 288 NLANALKEKGNVSEAEECYNTALRLCPT-----HADSLNNLANIKREQGYIEEAVQLYRK 342
Query: 342 --EPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKM 399
E + + A + +AS+L++ +Q A + + A A+ N L +M
Sbjct: 343 ALEVFPEFAAAHSNLASVLQQQGKLQ----EALMHYKEAIRISPTFADAYSNMGNTLKEM 398
Query: 400 EECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 459
++ G A +C A++ +P A +NLA+ H+ SG E
Sbjct: 399 QDVQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSGNIPE 437
Query: 460 KV 461
+
Sbjct: 438 AI 439
>gi|297538184|ref|YP_003673953.1| hypothetical protein M301_0992 [Methylotenera versatilis 301]
gi|297257531|gb|ADI29376.1| Tetratricopeptide TPR_2 repeat protein [Methylotenera versatilis
301]
Length = 1193
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 103/271 (38%), Gaps = 52/271 (19%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A AH+ LG + + L +A +SY+ A LR E D + + +L Q+ + Q
Sbjct: 137 PNFAKAHYNLGNVLKSLNSLEQAKASYKCA----LRIEVDNVQA-MCNLAQVLYEQDFFS 191
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
E+ + ++++ ++ + LG +G+L + +
Sbjct: 192 EA------------------IIYFQQALSIQDNFSIAYVGLGAAFQATGQLPGAEANFRK 233
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 251
+A++PN+ + + NLG G + ++ C++ L+ P Y K GS+
Sbjct: 234 AIAINPNDAEALSNLGGVLKTLGRLSEAEICYRTLLTIT---PENFDTY-----IKLGSL 285
Query: 252 LAGAGANTGEGACLDQASAVNV---------------------AKECLLAALKADPKAAH 290
L G AC +A ++N A+ C A+K +P
Sbjct: 286 LKSMGNIAESTACFKKALSINSQLEEAQNDLGLALAEQGRYSEAEACYQNAIKIEPNFWK 345
Query: 291 IWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
+ NL Y G + +KA L+ N
Sbjct: 346 AYNNLGLTLYNMGRFNEAEAAFDKAITLDAN 376
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 56/150 (37%), Gaps = 21/150 (14%)
Query: 170 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 229
N LGL L + GR + + + + ++PN NLG+ + G ++ F I
Sbjct: 314 NDLGLALAEQGRYSEAEACYQNAIKIEPNFWKAYNNLGLTLYNMGRFNEAEAAFDKAITL 373
Query: 230 DQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAA 289
D N AL+ L G + A+ CL A++ +P+
Sbjct: 374 DANE--------ALIYSNLSLPLVAQG-------------QIKRAEACLRRAIEVNPEYV 412
Query: 290 HIWANLANAYYLTGDHRSSGKCLEKAAKLE 319
+ + NL Y G + + +A K +
Sbjct: 413 NAYINLGTNYLAQGLAKEAESVFLQALKFD 442
>gi|218248025|ref|YP_002373396.1| family 2 glycosyl transferase [Cyanothece sp. PCC 8801]
gi|218168503|gb|ACK67240.1| glycosyl transferase family 2 [Cyanothece sp. PCC 8801]
Length = 1252
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 4/176 (2%)
Query: 159 MQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQ 218
++ + A W +LG + + + +I+ L ++PN NLG Q E+
Sbjct: 686 LKVQPKSAKAWMSLGNLYQEKKQFSQAINAYQQALFLEPNLVAVYNNLGYVLQQQSQWEE 745
Query: 219 SAKCFQDLILKDQNHPAALINYAALLLCKYG----SVLAGAGANTGEGACLDQASAVNVA 274
+ C+Q + N A IN A +L + + A N G +Q + A
Sbjct: 746 AISCYQKALEIQPNCVEAEINLANVLHSQNKLPPEQQIQYAQLNLQLGIKQEQQGNLATA 805
Query: 275 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
EC +K P++A I+ NL A+ G + + A L P T +++
Sbjct: 806 IECYQQGIKLQPESAEIYHNLGVAWQKQGKLEEAIAAYQNALDLNPQQGKTYFSLG 861
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 160 QSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 219
+ DT QA++ N LG++L + + + SI+ L++ PN D +LGIA+ + ++E++
Sbjct: 52 KQDT-QAMILNNLGIVLQEKQQFEESINCYYQALSIKPNWADVHNDLGIAFEKLDNLEEA 110
Query: 220 AKCFQDLILKDQNHPAALINYAALL 244
+ +Q + + N A N +L
Sbjct: 111 FQHYQKALTLNPNLAQASFNIGNIL 135
>gi|118581730|ref|YP_902980.1| hypothetical protein Ppro_3330 [Pelobacter propionicus DSM 2379]
gi|118504440|gb|ABL00923.1| TPR repeat-containing protein [Pelobacter propionicus DSM 2379]
Length = 1038
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 80/183 (43%), Gaps = 22/183 (12%)
Query: 154 KLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQS 213
+ ++++ D + LGL+L + R + + + ++ L++ PN+CD LG A+F
Sbjct: 576 RFRQAIGYDENNVDAYRCLGLLLNEQERYEEAAFLFATALSLAPNDCDLRRFLGDAHFGL 635
Query: 214 GDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNV 273
G+ +A + + + + + L+N GA + + +V
Sbjct: 636 GNYADAAHWYNNALSRRPDDVEVLLNL---------------------GAASEVLNRFDV 674
Query: 274 AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA-VS 332
A+ LL A++ P + NL + + + +KA + +PN + R+ +A VS
Sbjct: 675 AECSLLRAIELSPGDHRAYLNLGGVFLSQNRLEQAERYFQKALECKPNDPTVRWNLAQVS 734
Query: 333 RIK 335
I+
Sbjct: 735 LIR 737
>gi|158339402|ref|YP_001520579.1| hypothetical protein AM1_6330 [Acaryochloris marina MBIC11017]
gi|158309643|gb|ABW31260.1| TPR domain protein [Acaryochloris marina MBIC11017]
Length = 1346
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 71/175 (40%), Gaps = 21/175 (12%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
+ EE L+ L ++++ D A+ + G+ R + +I+ L +A+D G
Sbjct: 700 DRYEETLTALNQAIEIDPNMAIAYTNRGVTYSFLKRPKEAIADLKKAIALDSQYISAYGG 759
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
LG+ Y G +++ F I D +P INY +G+G
Sbjct: 760 LGMLYHSQGRYQEALAQFNQGIAIDPKNP---INY------------------SGQGFVY 798
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
A A++ +P +A+ + + AN Y T ++ + L KA +L P
Sbjct: 799 FAQKQYQDAIAAHTKAIELEPDSANDYFSRANVYITTQQYQDAIADLTKAIRLAP 853
>gi|427722550|ref|YP_007069827.1| hypothetical protein Lepto7376_0567 [Leptolyngbya sp. PCC 7376]
gi|427354270|gb|AFY36993.1| Tetratricopeptide TPR_1 repeat-containing protein [Leptolyngbya sp.
PCC 7376]
Length = 493
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 132/341 (38%), Gaps = 56/341 (16%)
Query: 12 GKKINKLGKCRSRISSKMDSALEFGVD--ADGDQSG-LGTSSSSREEKVSSLKTGLVHVA 68
G + LGK I S D AL+ D D G L E + S LV
Sbjct: 111 GNTLKVLGKYEEAIDS-YDQALKLEPDDYLSWDNKGDLLKELKQYHEAIQSYSKALV--- 166
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLS-----LVQI 123
P +A + GL+++ L Q A+ +Y KA EI + P +L LV++
Sbjct: 167 -IKPNSAEIWYKRGLVFELLSQDNDALMNYSKALEI------NQNSPHILCARGSILVRL 219
Query: 124 HHAQ----CL----------LPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVW 169
Q C + S L ++L+ ++E+ + +++ + Q ++W
Sbjct: 220 ERFQEALMCFNRAIELKADCVEAWSHKGFLLEQLK--KIEDAIFSYGQALAVNPNQEILW 277
Query: 170 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 229
G + L+ + Q + +L ++ + + N G++ ++ GD+ + KCFQ ++
Sbjct: 278 YHRGNLFLRQKQYQRGLHSYDEVLRLNREHYQSLNNKGVSLYKLGDVHGAFKCFQKVL-- 335
Query: 230 DQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAA 289
+ +P YA G + G C D+ ALK +PK +
Sbjct: 336 -EINP-----YAFSAWNNQGQICKAIGDYQEAIICYDK-------------ALKVEPKQS 376
Query: 290 HIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
IW+ G + + ++A +L+ + YA A
Sbjct: 377 KIWSKRGLCLAKLGHYEEAINSFQQAIQLDKSYAEALYAQA 417
>gi|326503118|dbj|BAJ99184.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 300
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 25/155 (16%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
++K +E++ D + A + + + G + +I + + + PN CD NL AY
Sbjct: 116 IAKNEEALAIDPQFAECYGNMANAWKEKGDIDLAIRYYLTAIQLRPNFCDAWSNLASAYT 175
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAG--AGANTGEGACLDQAS 269
+ G + ++A+C CK VL A++ G +
Sbjct: 176 RKGRLNEAAQC-----------------------CKQALVLNPRLVDAHSNLGNLMKAQG 212
Query: 270 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGD 304
V A C L A++ DP A W+NLA + GD
Sbjct: 213 LVQEAYTCYLEAIRIDPHFAIAWSNLAGLFMEVGD 247
>gi|376002124|ref|ZP_09779971.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|375329510|emb|CCE15724.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
Length = 728
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 82/193 (42%), Gaps = 15/193 (7%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
E ++ ++ + +++ V+ T+G + G+++ +I + L DPN NL
Sbjct: 32 EYDQAIAACQRALELKPNWPPVYVTMGNVSQGRGQIEEAIRCYAKALEFDPNLPQAHANL 91
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYA-----------ALLL----CKYGSV 251
G +++ G +E + +Q I + A +N A AL++ + S+
Sbjct: 92 GSMFYKQGKLESAIDSYQKAIALKPDLTAVYVNLARALRQMGRESEALIVEQKANQIHSL 151
Query: 252 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 311
G+ +G L + A A+ ADP A + L + G H+ +
Sbjct: 152 TGGSVHLYNQGNQLFNQGKLEEAIALWKQAIVADPNLAEAYCQLGIVHRHQGQHKEAIPF 211
Query: 312 LEKAAKLEPNCMS 324
L+KA +L+PN ++
Sbjct: 212 LQKAIELKPNFVA 224
>gi|126342739|ref|XP_001362317.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Monodelphis domestica]
Length = 1035
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 162 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 216
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 217 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 259
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 260 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 315
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 316 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 370
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 371 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 415
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 416 PAFADAHSNLASI------HKDSGNIPEAI 439
>gi|156401113|ref|XP_001639136.1| predicted protein [Nematostella vectensis]
gi|156226262|gb|EDO47073.1| predicted protein [Nematostella vectensis]
Length = 993
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 131/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 168 RLEEAKACYLKAIETQPSFAVAWSNLGCVFNAQGEIWLAIHHFEKAVQLDPNFLD----- 222
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 223 --AYINLGNVLKEARIFDRAV-------AAYLR--ALNLSPNHAVV------HGNLACVY 265
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + +C A +L P
Sbjct: 266 YEQGLIDLAVDTYRRAIELQPNFPDAYCNLANALKEQGKVSEAEECYNTALQLSPT---- 321
Query: 326 RYAVAVSRIKDAERSQEPTE--------------QLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 322 -HADSLNNLANIKREQGKIEESIRLYCKALEIFPEFAAAHSNLASVLQQQGKLQ----EA 376
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + H A AF N L +M++ G A +C A++ +
Sbjct: 377 LLHYKEAIRIHPTFADAFSNMGNLLKEMQDIQG---------------AIQCYSRAIQIN 421
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 422 PAFADAHSNLASV------HKDSGNIPEAI 445
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 144/379 (37%), Gaps = 68/379 (17%)
Query: 97 SYEKAEEI---LLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILS 153
+Y++AE+I L R E D +L L+ H QC LD+ L
Sbjct: 32 NYDRAEQICMQLWRREPD--NTGVLLLLSSIHFQC--------RRLDRSAHFSTL----- 76
Query: 154 KLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQS 213
+++ + A ++ LG + + G+L+ +++ + + P+ D NL A +
Sbjct: 77 ----AIKQNPMLAEAYSNLGNVFKERGQLKDALANYRHAVKLKPDFIDGYINLAAALVAA 132
Query: 214 GDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNV 273
GD+E + + A + Y L C + G L +
Sbjct: 133 GDLEGAVHAY-----------ATALQYNPDLYC----------VRSDLGNLLKALGRLEE 171
Query: 274 AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSR 333
AK C L A++ P A W+NL + G+ + EKA +L+PN + Y +
Sbjct: 172 AKACYLKAIETQPSFAVAWSNLGCVFNAQGEIWLAIHHFEKAVQLDPNFLDA-YINLGNV 230
Query: 334 IKDAERSQEPTEQLSWAGNEMASILREGDPVQIEP--PIAWAGFAAVQKTHHEVAAAFET 391
+K+A +A+ LR + + P + A V + A +T
Sbjct: 231 LKEARIFDR----------AVAAYLRA---LNLSPNHAVVHGNLACVYYEQGLIDLAVDT 277
Query: 392 EEN--ELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTG 449
EL A + L + V+ A+EC AL+ P A NLAN
Sbjct: 278 YRRAIELQPNFPDAYCNLANALKEQGKVSEAEECYNTALQLSPTHADSLNNLANI----- 332
Query: 450 DHRSSGKCLEKVLMVYCSS 468
R GK +E+ + +YC +
Sbjct: 333 -KREQGK-IEESIRLYCKA 349
>gi|345791944|ref|XP_543747.3| PREDICTED: transmembrane and TPR repeat-containing protein 1 [Canis
lupus familiaris]
Length = 876
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 136/335 (40%), Gaps = 48/335 (14%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E+ EE ++ LK+S+Q A +++L +L + R + + + + + P++ D N
Sbjct: 556 EKKEEAITLLKDSIQYGPEFADAYSSLASLLAEQERFKEAEEIYQAGIKNCPDSSDLHNN 615
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
G+ +G E++ +Q I +H A++N G + G
Sbjct: 616 YGVFLVDTGSPEKAVAHYQQAIALSPSHHVAMVN--------LGRLYRSLG--------- 658
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
D ++A K L A KA+ I + L YY TG + + + +AA L+P+
Sbjct: 659 DNSAAEEWYKRALQVARKAE-----ILSPLGALYYNTGRYEEALQIYREAAALQPSQREL 713
Query: 326 RYAVA-----VSRIKDAER-----SQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGF 375
R A+A + + K+AE+ E T L +++I + + +
Sbjct: 714 RLALAQVLAVMGQTKEAEKMTNHIVSEETGCLE-CYRLLSAIYSKQEHHDKALDVIDKAL 772
Query: 376 AAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAA 435
K V+ F T+ N+L E LD+A E AA++ +P A
Sbjct: 773 QLKPKDPKVVSELFFTKGNQLR---------EQNLLDKAF------ESYKAAVELNPDQA 817
Query: 436 HIWANLANAYYLTGDHRSSGKCLEKVLMVYCSSNL 470
W N+ ++ G++ S+ E+ L + S L
Sbjct: 818 QAWMNMGGIQHIKGNYVSARAYYERALQLVPDSKL 852
>gi|399020435|ref|ZP_10722565.1| putative methyltransferase (contains TPR repeat) [Herbaspirillum
sp. CF444]
gi|398094850|gb|EJL85204.1| putative methyltransferase (contains TPR repeat) [Herbaspirillum
sp. CF444]
Length = 445
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 15/128 (11%)
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAG------------- 254
I + +GD+E++ K ++D++ +D HP AL +Y + L + G G
Sbjct: 22 IGFHTAGDLEKAEKIYRDVLARDPVHPIAL-HYLGIFLYQNGQDEEGVQNIRLSCALQPE 80
Query: 255 -AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
A + G L A E AAL ADP +W NL ++ GD + + +
Sbjct: 81 NASWHNDLGNVLFALREFEEASEAYQAALDADPGDHIVWNNLGSSQLQHGDTEDAIQSFK 140
Query: 314 KAAKLEPN 321
+ +L P+
Sbjct: 141 QTLELAPD 148
>gi|386001437|ref|YP_005919736.1| TPR-repeat protein [Methanosaeta harundinacea 6Ac]
gi|357209493|gb|AET64113.1| TPR-repeat protein [Methanosaeta harundinacea 6Ac]
Length = 501
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 63/168 (37%), Gaps = 21/168 (12%)
Query: 154 KLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQS 213
+ E++ D + W GL L GRL ++ + L++DP + N G+A
Sbjct: 254 RYDEAISIDPASPLAWGGKGLSLYDGGRLSEAVVAYDTALSLDPQDPYVWNNKGVALRDL 313
Query: 214 GDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNV 273
G + ++ + + I D + A N +G LD+
Sbjct: 314 GRLSEAVEAYDVAISLDPQYSHAWYN---------------------KGIALDEMGEDEK 352
Query: 274 AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
A E A+ DP+ A+ W N A + G + K + A L+P
Sbjct: 353 AIEAYDMAISLDPEDANAWNNKGVALFGQGQLSEAIKAYDVAIVLDPG 400
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 76/217 (35%), Gaps = 34/217 (15%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
L E + ++ D + VWN G+ L GRL ++ +++DP N G
Sbjct: 282 LSEAVVAYDTALSLDPQDPYVWNNKGVALRDLGRLSEAVEAYDVAISLDPQYSHAWYNKG 341
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 267
IA + G+ E++ + + I D A N L G+G +
Sbjct: 342 IALDEMGEDEKAIEAYDMAISLDPEDANAWNNKGVALF--------------GQGQLSEA 387
Query: 268 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST-- 325
A +V A+ DP A W N A Y G + + + A L+P
Sbjct: 388 IKAYDV-------AIVLDPGYAQAWNNKGVALYDQGRLSEAVEAYDMALSLDPAYHHAWM 440
Query: 326 ----------RYAVAVSRIKDAERSQEPTEQLSWAGN 352
RY AV I D Q P + +W G
Sbjct: 441 NKGLALRSLGRYEEAV-LIYDEVIRQRPEDGDAWVGR 476
>gi|357419207|ref|YP_004932199.1| hypothetical protein Tlie_0365 [Thermovirga lienii DSM 17291]
gi|355396673|gb|AER66102.1| Tetratricopeptide TPR_1 repeat-containing protein [Thermovirga
lienii DSM 17291]
Length = 377
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 84/219 (38%), Gaps = 44/219 (20%)
Query: 81 LGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLD 140
LG +Y ++G+P KA S+ KA E RP+ L+ + + LL E
Sbjct: 102 LGNLYWKMGEPTKAEESFRKALE---------KRPDYLA-AWSNLGRLLLAEG------- 144
Query: 141 KELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNC 200
+++E L L+++ + LG G L+ +I L + P+
Sbjct: 145 ------KVQEALPALEKASELAPSNPENLYYLGEAKKALGNLEGAIEQYRKALELKPDYT 198
Query: 201 DCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTG 260
D L AY + G +++ + F++ I +D N+ L N+ +L
Sbjct: 199 DAEVALAFAYGRMGKVDKGVEIFKEAIARDPNNAKLLYNFGVMLFS-------------- 244
Query: 261 EGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 299
+ A + A K DP + +W NL+ Y
Sbjct: 245 -------TRQYSEAAQAFSKAGKLDPTSVEVWNNLSQTY 276
>gi|116622726|ref|YP_824882.1| hypothetical protein Acid_3625 [Candidatus Solibacter usitatus
Ellin6076]
gi|116225888|gb|ABJ84597.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 547
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 66/180 (36%), Gaps = 13/180 (7%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
W L L KSGR + + S + + P +C+ NLGI Q+GD + ++ I
Sbjct: 269 WFNLALAHQKSGRFEQAAEAYSECVKLRPQSCESHTNLGIVREQTGDTAGARSSYERAIK 328
Query: 229 KDQNHPAALINYAALLLCK---------YGSVLAGAG----ANTGEGACLDQASAVNVAK 275
+ A L N A LL Y VL A A G Q A
Sbjct: 329 AGPDALAPLWNLALLLEHAGQFEESERYYKQVLDRAPKEEEARFRMGFLRLQREDYRGAA 388
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 335
E LK P ANLA AY G+ + + EK +P M +A I+
Sbjct: 389 EAFEGCLKYRPAWPEAHANLALAYSGMGERDHAERLYEKMLDADPKSMDALRGLAALSIQ 448
>gi|434406141|ref|YP_007149026.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
gi|428260396|gb|AFZ26346.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
Length = 792
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 103/296 (34%), Gaps = 61/296 (20%)
Query: 159 MQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQ 218
+Q D QA WN G L GR + I+ L + P++ D N GIA + G E
Sbjct: 355 IQPDKHQA--WNNRGNALGNLGRYEDEIASYDQALKIQPDDPDAWNNRGIALGKLGRYED 412
Query: 219 SAKCFQDLILKDQ-NHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKEC 277
+ C+ D LK Q + P A N G L G N A D
Sbjct: 413 AIACY-DAALKIQPDDPGAWNN--------RGIALGKLGRNEDAIASYD----------- 452
Query: 278 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA-----VS 332
AALK P W N A G + + + A K++P+ Y +
Sbjct: 453 --AALKIQPDLHQAWYNRGIALRKLGRNEDAIASYDAALKIQPDDSDAWYNRGNDLGKLG 510
Query: 333 RIKDAERSQE------PTEQLSWA--GNEMASILREGDPVQIEPPIAWAGFAAVQKTHHE 384
R +DA S + P +W GN + ++ R+ D + A + A K +
Sbjct: 511 RNEDAIASYDAALKIQPDLHQAWYNRGNALGNLGRDEDAI--------ASYDAALKFQPD 562
Query: 385 VAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWAN 440
+ A+ N L + G E A AALK P W N
Sbjct: 563 LHEAWYNRGNALGNL----GRNEDAIA-----------SYDAALKFQPDYHQAWYN 603
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 70/180 (38%), Gaps = 29/180 (16%)
Query: 146 EELEEILSKLKESM--QSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
+E EE ++ ++ Q D QA WN G+ L GR + +I+ L + P+
Sbjct: 238 KEYEEAIASYDAALKIQPDKHQA--WNNRGIALGNLGRNEDAIASYDQALKIQPD----- 290
Query: 204 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK--YGSVLAGAGANTGE 261
A++ G+ C++D A+ +Y A L + Y G + G
Sbjct: 291 --YHQAWYNRGNALDELGCYED----------AIASYDAALKIQPDYHQAWYNRGNDLGN 338
Query: 262 GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
+ A A C AALK P W N NA G + ++A K++P+
Sbjct: 339 LGRYEDAIA------CYDAALKIQPDKHQAWNNRGNALGNLGRYEDEIASYDQALKIQPD 392
>gi|414078285|ref|YP_006997603.1| hypothetical protein ANA_C13102 [Anabaena sp. 90]
gi|413971701|gb|AFW95790.1| TPR repeat-containing protein [Anabaena sp. 90]
Length = 1342
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 81/197 (41%), Gaps = 25/197 (12%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E+ ++ + E+++ D ++ + N G L+ + +I + + +DP N G
Sbjct: 1055 EDYKQAIDNYTEAIKIDPKKII--NLRGAAYLQLKEYKLAIDDYNQAIQLDPKNAIYYGT 1112
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
G AY Q D +Q+ + D H A+ L ++ G G
Sbjct: 1113 RGDAYLQLKDYKQA--------INDYTH--------AIQLDPKNAIYYGT-----RGFAY 1151
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
Q +A A+K DPK A ++ +AY+ DH+ + +A KL+P+
Sbjct: 1152 LQLKDYKLAINDYTQAIKIDPKNATYYSARGDAYFQLKDHKQAIDDYTQAIKLKPDFTEA 1211
Query: 326 RYAVAVSR--IKDAERS 340
Y ++ +KD +++
Sbjct: 1212 YYVRGIAHYFLKDYKQA 1228
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI------LLRCEADIARPEL-LSLVQIH 124
PKNA+ + G+ + L +A+ +Y +A +I LR A + E L++ +
Sbjct: 1038 PKNANYYSGRGIAHHFLEDYKQAIDNYTEAIKIDPKKIINLRGAAYLQLKEYKLAIDDYN 1097
Query: 125 HAQCLLPESS---GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGR 181
A L P+++ G D L+ ++ ++ ++ ++Q D + A+ + T G L+
Sbjct: 1098 QAIQLDPKNAIYYGTRG-DAYLQLKDYKQAINDYTHAIQLDPKNAIYYGTRGFAYLQLKD 1156
Query: 182 LQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
+ +I+ + + +DP N G AYFQ D +Q+ + I
Sbjct: 1157 YKLAINDYTQAIKIDPKNATYYSARGDAYFQLKDHKQAIDDYTQAI 1202
>gi|394988745|ref|ZP_10381580.1| hypothetical protein SCD_01151 [Sulfuricella denitrificans skB26]
gi|393792124|dbj|GAB71219.1| hypothetical protein SCD_01151 [Sulfuricella denitrificans skB26]
Length = 795
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 26/171 (15%)
Query: 57 VSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPE 116
+ SL+ GLV + P +A L +YQR G KA++ YE + EA
Sbjct: 632 IHSLQQGLVAI----PGDARMSMSLAELYQRSGDNDKAIAEYEAVLKKTPGIEA------ 681
Query: 117 LLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLIL 176
++ LL E SLDK LE L + ++ A V +TLG I
Sbjct: 682 -----AANNLASLLTEKGDKASLDKALE----------LAKHFENSATPAFV-DTLGWIY 725
Query: 177 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
KSG+ ++ +L P +LG+A ++ GDM+ + Q ++
Sbjct: 726 YKSGQNDQALPLLQKAADKAPQAVIFQYHLGMALYKKGDMKAAKTALQKVV 776
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 121/316 (38%), Gaps = 51/316 (16%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
LE + ++ + K +Q D + A + G++ + + S L ++P + D
Sbjct: 42 LEQADYDKARVEFKNVLQIDPKNADAYYMSGVLEEEQNNWPKAYGNYSKALELNPEHLDA 101
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 262
LG Y S D ++ K +++ K PAA AAL+ A G
Sbjct: 102 KAKLGKIYLLSNDAVKAEKMVNEILAKKPADPAAHTLKAALM------------ARKG-- 147
Query: 263 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
D+A A+ A + ++ ADP + LA Y GD + + LEK K P
Sbjct: 148 ---DEAGAIQEASQVVV----ADPTQFEAVSLLAALYTKKGDEAKAKEVLEKGIKDNPRN 200
Query: 323 MSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILRE------GDPVQIEPPIAWAGFA 376
+S R ++ ++ N+MAS ++ DP ++E I A F
Sbjct: 201 VSLRMSLV---------------SIATKHNDMASAEKQLIEIIAIDPKKLEYRITLATFY 245
Query: 377 A----VQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADP 432
A V K + + + + ++ A FL A++ LL+ ++ P
Sbjct: 246 ARTNQVDKAEKSLRDTIQADPEDETRYLLLA-----EFLATRKGPEEAEKELLSVIQNKP 300
Query: 433 KAAHIWANLANAYYLT 448
KA + LA Y T
Sbjct: 301 KAYKVRFGLAKIYQAT 316
>gi|166368783|ref|YP_001661056.1| hypothetical protein MAE_60420 [Microcystis aeruginosa NIES-843]
gi|166091156|dbj|BAG05864.1| TPR repeat protein [Microcystis aeruginosa NIES-843]
Length = 631
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 61/161 (37%), Gaps = 21/161 (13%)
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
LG+I+ G++ +I L ++PN + NLGI GD++++ CF I +Q
Sbjct: 6 LGVIMDSLGQIDQAILAYKQALLINPNYAEAHNNLGIIAVSKGDLDEAIICFNQAIRSNQ 65
Query: 232 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 291
N+ A A G L + A A++ +P
Sbjct: 66 NY---------------------AFAENNLGLVLQMQDKLGDAVVNFQEAIRKNPNYPEA 104
Query: 292 WANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 332
NL N L G + + A KL P + ++A++
Sbjct: 105 HFNLGNVLQLQGKTEEAIAYFQTAIKLNPKYIKAYNSLALA 145
>gi|40063047|gb|AAR37903.1| TPR domain/sulfotransferase domain protein [uncultured marine
bacterium 560]
Length = 723
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 90/214 (42%), Gaps = 18/214 (8%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
++ E + +K + + +++N G+ G+L ++ LA+ P+ + NL
Sbjct: 26 KINEAIDAIKVLTKDFPNEPLLYNISGVCYKTIGQLDVAVKSFEKALAIKPDYTEVNYNL 85
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL---------LCKYGSVLA---- 253
G+ + + G ++ + KC++D++ + H A N L + Y +A
Sbjct: 86 GLTFQELGQLDAAVKCYEDVLAVNPEHAEAHNNLGVTLKELEQLDAAVKSYEKAIAIKPD 145
Query: 254 GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
A A+ G L + ++VA + A+ P A NL NA G + K E
Sbjct: 146 YAEAHNNLGNALKELGQLDVAVKSYEKAIAIKPDFAETHNNLGNALQGLGQLDEAVKSYE 205
Query: 314 KAAKLEPNCMSTRYAVA-----VSRIKDAERSQE 342
+A ++ + + Y + + ++ DA +S E
Sbjct: 206 QAIAIQSDFSNAYYNLGNVLRELGQLDDAVKSYE 239
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 115/293 (39%), Gaps = 51/293 (17%)
Query: 43 QSGLGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAE 102
+ LG + E+ +++K+ +A K P A AH LG + LGQ AV SYEKA
Sbjct: 116 HNNLGVTLKELEQLDAAVKSYEKAIAIK-PDYAEAHNNLGNALKELGQLDVAVKSYEKAI 174
Query: 103 EILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEP-EELEEILSKLKESM-- 159
I +P+ + N+L L+ +L+E + ++++
Sbjct: 175 AI---------KPDF---------------AETHNNLGNALQGLGQLDEAVKSYEQAIAI 210
Query: 160 QSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 219
QSD A + LG +L + G+L ++ +A+ P+ + NLG A G ++++
Sbjct: 211 QSDFSNA--YYNLGNVLRELGQLDDAVKSYEKAIAIKPDYDEAHNNLGNALQGLGQLDEA 268
Query: 220 AKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLL 279
K ++ I + A N G L + V+ A
Sbjct: 269 VKSYEQAIAIQSDFSNAYYNL---------------------GNVLRELGQVDTAVRSYK 307
Query: 280 AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 332
A+ P A NL A G ++ K LEKA + P+ + + ++
Sbjct: 308 KAIVIKPDYAKAHNNLGIALQDLGQMDTAVKNLEKAIAITPDFAEAHHNLGIA 360
>gi|145537956|ref|XP_001454689.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422455|emb|CAK87292.1| unnamed protein product [Paramecium tetraurelia]
Length = 432
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 29/154 (18%)
Query: 170 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 229
NTL ++ R Q +I + ++PN + I N GIA F + + +C+ +I
Sbjct: 284 NTLFIL----NRYQDAIESYDQAIKINPNYIEAIYNKGIALFNLNRFQDAIECYDHVIAI 339
Query: 230 DQNHPAALIN--YAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPK 287
D N+ A N A L +Y L C DQA+ +N P
Sbjct: 340 DSNYNDAYYNKGIALFNLNRYQEAL----------DCYDQATRIN-------------PN 376
Query: 288 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
+ + N NA Y+ + + +C ++ K++ N
Sbjct: 377 QSDAFYNKGNALYILKRYEEALECYNQSNKIDIN 410
>gi|55670588|pdb|1W3B|A Chain A, The Superhelical Tpr Domain Of O-Linked Glcnac Transferase
Reveals Structural Similarities To Importin Alpha.
gi|55670589|pdb|1W3B|B Chain B, The Superhelical Tpr Domain Of O-Linked Glcnac Transferase
Reveals Structural Similarities To Importin Alpha
Length = 388
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 63/158 (39%), Gaps = 21/158 (13%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
A ++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 67 AEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY-- 124
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 285
+ + Y L C + G L + AK C L A++
Sbjct: 125 ---------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQ 165
Query: 286 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
P A W+NL + G+ + EKA L+PN +
Sbjct: 166 PNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 203
>gi|406982863|gb|EKE04130.1| hypothetical protein ACD_20C00104G0024 [uncultured bacterium]
Length = 553
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 114/290 (39%), Gaps = 49/290 (16%)
Query: 51 SSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEA 110
+ ++ + LK H+A P N+ ++ LG +Y RL AV+++ ++ A
Sbjct: 268 TQYKDNIDDLKDCYNHLAELEPDNSRIYYDLGHLYLRLEDKFSAVNAFRRS--------A 319
Query: 111 DIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTR-QAVVW 169
DI + +A L + G ++E ++ + D++ ++V
Sbjct: 320 DIEPSNPFYHNSLAYALVQLEDYDG-----------AIDEYQKAIR--LNPDSQWTSIVT 366
Query: 170 NTLGLIL--LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
+G I +KS + ++I + + +DPNN D LG Y ++ ++ + C+ ++I
Sbjct: 367 QAMGAIYHQVKSN-IDAAIIAYRTSIVLDPNNVDAYIALGELYHETNNINNAIDCYCEVI 425
Query: 228 LKDQNHPAALINY-------------------AALLLCKYGSVLAGAGANTGEGACLDQA 268
D + P N A + KY L G +GA
Sbjct: 426 KLDASIPKVYCNLGLALWEKDYIEESIVAFQKAVSIDPKYDVALNNLGVVYLDGAGKPDE 485
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 318
+ +N + A+K +P A + N AY + + S+ K + A +
Sbjct: 486 ALINFTR-----AIKINPNYATAYYNKGRAYQVLNNKMSAAKYYQMAIDI 530
>gi|162147294|ref|YP_001601755.1| hypothetical protein GDI_1499 [Gluconacetobacter diazotrophicus PAl
5]
gi|161785871|emb|CAP55442.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 232
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 66/149 (44%), Gaps = 13/149 (8%)
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
LG I + G+ +S+I +L LA P N + LG+A +G E + CF+ +
Sbjct: 48 LGTIHARQGKFESAIPLLRRALARMPANAEGYNVLGMALRDAGQAEDAIACFRRAVAIRP 107
Query: 232 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLD-QASAVNVAKECLLAALKADPKAAH 290
+H A N L+ G AGA A LD Q +A+ + AL ADP
Sbjct: 108 DHQGARTNLGNALVA--GGDRAGAIAQFRALLTLDTQLAAIADYRT----ALAADP---- 157
Query: 291 IWANLANAYYLTGDHRSSGKCLEKAAKLE 319
A++ L G R+ G+C E AA +
Sbjct: 158 --ADVETLIRLGGALRTIGRCEEAAAHFQ 184
>gi|421597100|ref|ZP_16040780.1| hypothetical protein BCCGELA001_07294 [Bradyrhizobium sp.
CCGE-LA001]
gi|404270790|gb|EJZ34790.1| hypothetical protein BCCGELA001_07294 [Bradyrhizobium sp.
CCGE-LA001]
Length = 452
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 90/227 (39%), Gaps = 27/227 (11%)
Query: 129 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 188
LL E+ GD L + L ++++ D + A + G++ RL +++
Sbjct: 106 LLREAGGD-----------LNRAAADLTKAIELDPKDAEAYELRGVVYTNQRRLDRALAD 154
Query: 189 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 248
+ + P++ + G+AY+ GD E++ K F + + D N N A K
Sbjct: 155 YDQAIKLKPDDAQAWSDRGVAYYLGGDNEKAVKNFDEALRLDPNRARTYTNRGA-AYKKL 213
Query: 249 GSVLAGAGANTGEGACLD-QASAVNVAKECLLAALKADPKA-------------AHIWAN 294
G L A A+ GE LD + + AA+ KA A+ N
Sbjct: 214 GQ-LNKAVADDGEAIRLDPRVPEYYDNRGLTYAAMGEYDKAIADYDQAIRREQRANFLTN 272
Query: 295 LANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ 341
++Y G+ ++ E A KL+PN T AV K ER +
Sbjct: 273 RGDSYQFKGELGAALSDYEAALKLDPNFAKTYNNRAVLYKKMGERKK 319
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 113/285 (39%), Gaps = 52/285 (18%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
PK+A A+ L G++Y + +A++ Y++A ++ + D A Q + +
Sbjct: 129 PKDAEAYELRGVVYTNQRRLDRALADYDQA----IKLKPDDA--------QAWSDRGVAY 176
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
GDN E+ + E+++ D +A + G K G+L +++
Sbjct: 177 YLGGDN-----------EKAVKNFDEALRLDPNRARTYTNRGAAYKKLGQLNKAVADDGE 225
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 251
+ +DP + N G+ Y G+ +++ + I ++Q A L G
Sbjct: 226 AIRLDPRVPEYYDNRGLTYAAMGEYDKAIADYDQAIRREQR---------ANFLTNRGDS 276
Query: 252 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 311
G GA L A ALK DP A + N A Y G+ + +
Sbjct: 277 YQFKGE---LGAALSDYEA----------ALKLDPNFAKTYNNRAVLYKKMGERKKALAD 323
Query: 312 LEKAAKLEP---NCMSTRYAVAVSRIKDAERSQEPTEQLSW-AGN 352
E A KL+P N + R V ++ I A+ EP LS AGN
Sbjct: 324 YETALKLDPGNENATNGRR-VMIAEI--AKFGAEPPRALSAEAGN 365
>gi|425445062|ref|ZP_18825101.1| putative glycosyl transferase [Microcystis aeruginosa PCC 9443]
gi|389735016|emb|CCI01403.1| putative glycosyl transferase [Microcystis aeruginosa PCC 9443]
Length = 403
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
E E E LS +++++ D A + LGL+ + RL SI L ++P+N
Sbjct: 289 EAENYEAALSVFEKTVEIDPSYADGYYNLGLVFKQLHRLPESIKAYKKALKLNPDNPTIY 348
Query: 204 GNLGIAYFQSGDMEQSAKCFQD--LILKDQ 231
NLG+AY G ++ + +Q +LKDQ
Sbjct: 349 QNLGVAYIVFGSYNEAIEIWQKGLQLLKDQ 378
>gi|257060651|ref|YP_003138539.1| family 2 glycosyl transferase [Cyanothece sp. PCC 8802]
gi|256590817|gb|ACV01704.1| glycosyl transferase family 2 [Cyanothece sp. PCC 8802]
Length = 1252
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 4/176 (2%)
Query: 159 MQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQ 218
++ + A W +LG + + + +I+ L ++PN NLG Q E+
Sbjct: 686 LKVQPKSAKAWMSLGNLYQEKKQFSQAINAYQQALLLEPNLVAVYNNLGYVLQQQSQWEE 745
Query: 219 SAKCFQDLILKDQNHPAALINYAALLLCKYG----SVLAGAGANTGEGACLDQASAVNVA 274
+ C+Q + N A IN A +L + + A N G +Q + A
Sbjct: 746 AISCYQKALEIQPNCVEAEINLANVLHSQNKLPPEQQIQYAQLNLQLGIKQEQQGNLATA 805
Query: 275 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
EC +K P++A I+ NL A+ G + + A L P T +++
Sbjct: 806 IECYQQGIKLQPESAEIYHNLGVAWQKQGKLEEAIAAYQNALDLNPQQGKTYFSLG 861
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 160 QSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 219
+ DT QA++ N LG++L + + + SI+ L++ PN D +LGIA+ + ++E++
Sbjct: 52 KQDT-QAMILNNLGIVLQEKQQFEESINCYYQALSIKPNWADVHNDLGIAFEKLDNLEEA 110
Query: 220 AKCFQDLILKDQNHPAALINYAALL 244
+ +Q + + N A N +L
Sbjct: 111 FQHYQKALTLNPNLAQASFNIGNIL 135
>gi|359460635|ref|ZP_09249198.1| TPR domain-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 562
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 74/174 (42%), Gaps = 23/174 (13%)
Query: 66 HVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHH 125
V + PK+A A+F G+ Y ++G A++ Y KA ++ + A + LVQ++
Sbjct: 323 QVIKFQPKSALAYFNRGVAYSKVGDNATALADYSKAIQLDPKYAAALYN---RGLVQLNQ 379
Query: 126 AQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSS 185
NS D ++ S+Q DT+ A + G LK+G +++
Sbjct: 380 G----------NSQD----------AIADFTASIQMDTKYAAAYKNRGTAHLKAGNTEAA 419
Query: 186 ISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 239
I+ + + + + N GIA+ +G E + + ++ D AA N
Sbjct: 420 IADFTQAITFNAEDTLAYYNRGIAHSTAGQNEAAIADYSQVLTLDPKFAAAYTN 473
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 66/169 (39%), Gaps = 21/169 (12%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
L+ +++Q D + A GL+ L G Q +I+ ++ + +D N G A+
Sbjct: 352 LADYSKAIQLDPKYAAALYNRGLVQLNQGNSQDAIADFTASIQMDTKYAAAYKNRGTAHL 411
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 271
++G+ E + F I + A L Y +A + A E A D + +
Sbjct: 412 KAGNTEAAIADFTQAITFN----------AEDTLAYYNRGIAHSTAGQNEAAIADYSQVL 461
Query: 272 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
+ DPK A + N N + GD ++ K +A + P
Sbjct: 462 TL-----------DPKFAAAYTNRGNLHAAQGDRDAALKDYSQAIEANP 499
>gi|344301498|gb|EGW31810.1| hypothetical protein SPAPADRAFT_56571 [Spathaspora passalidarum
NRRL Y-27907]
Length = 821
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 107/253 (42%), Gaps = 37/253 (14%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P+N LLG Y L +A ++Y++A L E ++ ++ H +L
Sbjct: 121 PENGDTWGLLGHCYLMLDDLQRAYAAYQRALYYL----------ENPNVPKLWHGIGILY 170
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+ G SL E EE ++ E + ++ LG+I G+LQS++
Sbjct: 171 DRYG--SL------EYAEEAFVRVLELDPHFDKSNEIYFRLGIIYKHQGKLQSALECFQY 222
Query: 192 LLAVDPN---NCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 248
+L+ P+ D +G Q D + + ++ ++ + H A +L +
Sbjct: 223 ILSTPPHPLTQPDVWFQIGSVLEQQKDWNGAKEAYEKVLQVNPQH--------AKVLQQL 274
Query: 249 GSVLAGAGAN------TGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLT 302
G + + A +N +G+G L Q +N+A + L +L+ D AH W L + +
Sbjct: 275 GCLYSQAESNPSTPNTSGQGQPLQQD--LNIALKYLTKSLEIDQNDAHSWYYLGRVHMIR 332
Query: 303 GDHRSSGKCLEKA 315
GD ++ + ++A
Sbjct: 333 GDFNAAYEAFQQA 345
>gi|428169180|gb|EKX38116.1| hypothetical protein GUITHDRAFT_115669 [Guillardia theta CCMP2712]
Length = 842
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 109/257 (42%), Gaps = 41/257 (15%)
Query: 171 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS-AKC------- 222
+ G +L R+ +I++ SS + +DP+ D NLG A QSG + + AKC
Sbjct: 234 SYGNLLFDERRMDEAIAMFSSAIRIDPSLEDARNNLGNALRQSGWLREVLAKCLKLACNS 293
Query: 223 -----FQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKEC 277
FQDL + D+ A Y S+L G+ + +G + A+ KE
Sbjct: 294 VQQTVFQDLGMLDETRRVADAAYKINPRIVEASILRGS-VDYAKGFMRE---AIERYKE- 348
Query: 278 LLAALKADPKAAHIWANLANAY---YLTGDHRSSGKCLE---KAAKLEPNCMSTRYAVAV 331
ALK DP + NL N Y Y + R + + E + +L+ +C+ + V
Sbjct: 349 ---ALKLDPTSQQTLLNLGNTYGDLYRQLEARVTNQNSEARKEMRELQNSCIQVYKKMLV 405
Query: 332 SRIKDAE-------RSQEPTEQLSWAGN-----EMASI-LREGDPVQIEPPIAWAGFAAV 378
DA+ + E +W N EMA + +++G P ++P +A A F
Sbjct: 406 LDPIDAQAFLNMVWAQKYACEWANWEENLRRIEEMARMQIKQGKPPSLKPFLALA-FPIS 464
Query: 379 QKTHHEVAAAFETEENE 395
+ ++A A EE +
Sbjct: 465 PTLYLDIARAHAQEEQK 481
>gi|407772277|ref|ZP_11119579.1| hypothetical protein TH2_00220 [Thalassospira profundimaris WP0211]
gi|407284230|gb|EKF09746.1| hypothetical protein TH2_00220 [Thalassospira profundimaris WP0211]
Length = 680
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 63/162 (38%), Gaps = 13/162 (8%)
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
L+ G + + L+ P + LG Y +S + ++ KC + I D+N
Sbjct: 68 LIDQGEFAKGVELARQLVEYAPESAQIWNLLGFGYAKSQNPVEAEKCLRKAIEIDKNFGM 127
Query: 236 ALINYAALLLCKYGSVLA-------------GAGANTGEGACLDQASAVNVAKECLLAAL 282
A +N L + LA AG + L + + A++ + A+
Sbjct: 128 AWVNIGKLFSTQNKWDLALQAFQNASYIEPQNAGVLSSIAGILVEMRRFDEAEKFCVMAI 187
Query: 283 KADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS 324
K DP A + NL Y ++ + EK A+L PN M+
Sbjct: 188 KYDPNLAEPYLNLGIILYRKKKRGAAKQAFEKVAQLRPNNMT 229
>gi|332800529|ref|YP_004462028.1| hypothetical protein TepRe1_2623 [Tepidanaerobacter acetatoxydans
Re1]
gi|332698264|gb|AEE92721.1| Tetratricopeptide TPR_1 repeat-containing protein
[Tepidanaerobacter acetatoxydans Re1]
Length = 175
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%)
Query: 157 ESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 216
E + D A+ +N LG+I ++ L+ + L ++P NLG YF+ G+
Sbjct: 26 EILLIDPNNAIAYNKLGVISVREENLEQAKIYFIKALELNPKLSSASSNLGNIYFEKGNF 85
Query: 217 EQSAKCFQDLILKDQNHPAALINYAAL 243
E++ C++ I D ++P N A +
Sbjct: 86 EKAKDCYEKAIAIDPDNPVPYNNLAVI 112
>gi|188581172|ref|YP_001924617.1| hypothetical protein Mpop_1919 [Methylobacterium populi BJ001]
gi|179344670|gb|ACB80082.1| Tetratricopeptide TPR_2 repeat protein [Methylobacterium populi
BJ001]
Length = 286
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
++ L + + + A + T G +SG+ +IS S + +DPN+ N +AY
Sbjct: 54 IASLSDVISRNPSDAGAYVTRGAAYARSGQFGEAISDFSKAIQLDPNSASAYNNRALAYR 113
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAAL 243
Q+G + + + F I D N AA I A L
Sbjct: 114 QTGRNDAAMQDFSKAIATDPNFSAAYIGRANL 145
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 23/193 (11%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPN-NCDCIGN 205
+ E +S +++Q D A +N L ++GR +++ S +A DPN + IG
Sbjct: 83 QFGEAISDFSKAIQLDPNSASAYNNRALAYRQTGRNDAAMQDFSKAIATDPNFSAAYIGR 142
Query: 206 LGIAYFQSGDME--------------QSAKCF--QDLILKDQN-HPAALINYAALLLCKY 248
+ Q GD+ +SA+ + + L+ + Q +P A+ ++AA +
Sbjct: 143 ANLERAQ-GDLNGALNDLNVAIRLAPESAEAYHARGLVRQKQGQNPEAIGDFAAAI--DR 199
Query: 249 GSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSS 308
+A A G+ L + + A E AAL + K A WA AY T + +
Sbjct: 200 NPFVAAPYAARGQ--SLISLNQYDKAIEDFNAALNVNSKDASSWAYRGLAYEKTNRRKEA 257
Query: 309 GKCLEKAAKLEPN 321
+ ++AA+L+PN
Sbjct: 258 NESYQQAARLDPN 270
>gi|158425090|ref|YP_001526382.1| hypothetical protein AZC_3466 [Azorhizobium caulinodans ORS 571]
gi|158331979|dbj|BAF89464.1| TPR repeat protein [Azorhizobium caulinodans ORS 571]
Length = 779
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%)
Query: 158 SMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDME 217
S++ D + +V + L L + GR+ +++ L A+DP N + + + G Q GD
Sbjct: 85 SLKRDPKNPIVQHMYALCLRQIGRIPEAVAALRISTALDPRNVEALADYGSLLLQMGDRA 144
Query: 218 QSAKCFQDLILKDQNHPAALINYAAL 243
+ + F+ + NHP A A L
Sbjct: 145 AAREAFEKALALRPNHPVAKAGIARL 170
>gi|33864076|ref|NP_895636.1| hypothetical protein PMT1809 [Prochlorococcus marinus str. MIT
9313]
gi|33635660|emb|CAE21984.1| TPR repeat [Prochlorococcus marinus str. MIT 9313]
Length = 549
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 68/185 (36%), Gaps = 21/185 (11%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
EL++ + ++ + D N G I + R I LS +++ P+N D I NL
Sbjct: 15 ELDKAEAIYQQVLAVDVNNFYALNFCGSIKREKKRFDEGIDFLSRAISLQPDNPDAIYNL 74
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G + S +++ C++ + P AL N G CL
Sbjct: 75 GNVFKDSERWDEAISCYEKTLGLRAESPEALNNL---------------------GICLK 113
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
+ ++ L + P A W NL N + + + A L+P+ +
Sbjct: 114 EVERFEYSEIVLRRVVSMQPGLAGAWLNLGNTFKEQEKYSEAKASYRNAIDLKPDFEAAY 173
Query: 327 YAVAV 331
+A+ +
Sbjct: 174 FALGL 178
>gi|301059880|ref|ZP_07200771.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
gi|300446030|gb|EFK09904.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
Length = 206
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 23/181 (12%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
+E +L+E + +++++ R + LG I K G L+ + + ++P
Sbjct: 36 MEQGKLDEAIGAFNDAIENSGRMFEAYVNLGYIYFKQGDLERVVYANQQAIEIEPRYARG 95
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 262
NLG AY Q E++ K L++ + +P + Y+ L + TGE
Sbjct: 96 YANLGFAYLQMLRTEEAIKA---LVIAIELNPEIIQAYSNLTNAYLQNDEIEKAIETGE- 151
Query: 263 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL--EP 320
K LA P+ A NLA+AYY GD+ + + L+KA +L EP
Sbjct: 152 ------------KMVALA-----PEFALGLNNLASAYYNKGDYAKAIENLDKAVELGFEP 194
Query: 321 N 321
+
Sbjct: 195 H 195
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 71/178 (39%), Gaps = 21/178 (11%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
++P++ EE + + K+ DT A G+ L++ G+L +I + + +
Sbjct: 2 IKPKDSEEFIYQQKQIRDEDTECASTSYNDGVSLMEQGKLDEAIGAFNDAIENSGRMFEA 61
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 262
NLG YF+ GD+E+ Q I + P YA L G
Sbjct: 62 YVNLGYIYFKQGDLERVVYANQQAI---EIEPRYARGYANL------------------G 100
Query: 263 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
Q A + L+ A++ +P+ ++NL NAY + + + EK L P
Sbjct: 101 FAYLQMLRTEEAIKALVIAIELNPEIIQAYSNLTNAYLQNDEIEKAIETGEKMVALAP 158
>gi|260222435|emb|CBA31996.1| hypothetical protein Csp_D29910 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 1449
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 68/178 (38%), Gaps = 13/178 (7%)
Query: 170 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 229
N LG++ G Q ++ + L+A+ P N G+A G +E +A+ +Q +
Sbjct: 31 NNLGILCNSMGEHQQALGLFEQLIALVPQESKAHANRGVALKALGRLEDAAQAYQHALTL 90
Query: 230 DQNHPAALINYAALLLCK--------YGSVLAGAGANTGE-----GACLDQASAVNVAKE 276
D +A N LL + Y + GE CL + + A+
Sbjct: 91 DPRFHSAHNNLGNLLYSQGAFDKALNYFETASSLQPQLGEYRFMLAKCLLELQQMERARS 150
Query: 277 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRI 334
L L+ADP A W LA + + C E+ + P+ Y ++R+
Sbjct: 151 ELTLVLRADPTNADAWGTLARLWSEKHAMPEALACFERGIAVRPDYAGLIYNRGLARL 208
>gi|116623761|ref|YP_825917.1| hypothetical protein Acid_4673 [Candidatus Solibacter usitatus
Ellin6076]
gi|116226923|gb|ABJ85632.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 775
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 78/191 (40%), Gaps = 19/191 (9%)
Query: 53 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 112
R++K L L K + A G YQR+G+ +A++ Y+K L +
Sbjct: 259 RQKKAPELDALLRDFVAKFQQYPKAPMDAGDFYQRIGKLEQAIALYQKG----LESDRTN 314
Query: 113 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 172
+ L +V + Q E++ ++ IL++ + + +A + T
Sbjct: 315 RKDYLKRIVDVRMQQSRFDEATA-----------TVDSILTEFPGDLDAIASRAALRMTT 363
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
G K +Q + +LL DP N + NL A Q+GD Q+ +++ +D N
Sbjct: 364 G----KPTEIQRARDEFGALLKRDPQNNELRFNLARASRQAGDETQARSALVEILRRDPN 419
Query: 233 HPAALINYAAL 243
H AL A L
Sbjct: 420 HRNALRELADL 430
>gi|322435449|ref|YP_004217661.1| hypothetical protein AciX9_1834 [Granulicella tundricola MP5ACTX9]
gi|321163176|gb|ADW68881.1| Tetratricopeptide TPR_1 repeat-containing protein [Granulicella
tundricola MP5ACTX9]
Length = 340
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 23/156 (14%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P+++ A +LLG + QR +P ++++ Y +A I +P L LV
Sbjct: 90 PRSSEALYLLGFVLQRENKPKESLAIYTRAAAI------SPPQPNDLKLV---------- 133
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+LD L + + IL LK S+ D A W LG ++ G +
Sbjct: 134 ------ALDYVLLNDYPDAIL-WLKRSLDGDPANAEAWYFLGRAKMQGGDFVEAEKAFRR 186
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 227
L + PN+ + NLG++ E +A+ ++D I
Sbjct: 187 ALTLAPNDSRALDNLGLSLAAQNRTEDAAQAYKDAI 222
>gi|158337072|ref|YP_001518247.1| hypothetical protein AM1_3945 [Acaryochloris marina MBIC11017]
gi|158307313|gb|ABW28930.1| TPR domain protein [Acaryochloris marina MBIC11017]
Length = 594
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 73/174 (41%), Gaps = 23/174 (13%)
Query: 66 HVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHH 125
V + PK+A A+F G+ Y ++G A++ Y KA ++ + A + L+ L Q
Sbjct: 355 QVIKFQPKSALAYFNRGVAYSKVGDNATALADYSKALQLDPKYAAALYNRGLVQLNQ--- 411
Query: 126 AQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSS 185
NS D ++ S+Q DT+ A + G LK+G +++
Sbjct: 412 ----------GNSQD----------AIADFTASIQMDTKYAAAYKNRGTAHLKAGNTEAA 451
Query: 186 ISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 239
I+ + + + + N GIA+ +G E + + ++ D AA N
Sbjct: 452 IADFTQAITFNAEDTLAYYNRGIAHSTAGQNEAAIADYSQVLKLDPKFAAAYTN 505
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 66/169 (39%), Gaps = 21/169 (12%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
L+ +++Q D + A GL+ L G Q +I+ ++ + +D N G A+
Sbjct: 384 LADYSKALQLDPKYAAALYNRGLVQLNQGNSQDAIADFTASIQMDTKYAAAYKNRGTAHL 443
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 271
++G+ E + F I + A L Y +A + A E A D +
Sbjct: 444 KAGNTEAAIADFTQAITFN----------AEDTLAYYNRGIAHSTAGQNEAAIADYSQV- 492
Query: 272 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
LK DPK A + N N + GD ++ K +A + P
Sbjct: 493 ----------LKLDPKFAAAYTNRGNLHAAQGDRDAALKDYSQAIEANP 531
>gi|51892857|ref|YP_075548.1| hypothetical protein STH1719 [Symbiobacterium thermophilum IAM
14863]
gi|51856546|dbj|BAD40704.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 422
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 75/199 (37%), Gaps = 23/199 (11%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E L L +++ + N +G LL++GR + +I A++P++ +GNL A
Sbjct: 241 EALRALLRAVRLRPSDPTLLNNVGYTLLRAGRTREAIESYRQASALEPDSPLTLGNLAAA 300
Query: 210 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 269
F+ G M ++ + K P L N LLL +A
Sbjct: 301 LFEGGMMAEATALLDAALQKAPGDPTLLNNKGHLLL---------------------KAG 339
Query: 270 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAV 329
A C ALK P AN A Y+ G + + A EP+ +++
Sbjct: 340 QYREALACFEEALKRAPDDPAALANQAACYFALGRYEQALNAYRLAVATEPHNKQYLWSI 399
Query: 330 A--VSRIKDAERSQEPTEQ 346
+ R+ AE + + Q
Sbjct: 400 GACLERLGRAEEALQTYNQ 418
>gi|170078681|ref|YP_001735319.1| hypothetical protein SYNPCC7002_A2078 [Synechococcus sp. PCC 7002]
gi|169886350|gb|ACB00064.1| TPR domain containing protein [Synechococcus sp. PCC 7002]
Length = 318
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 62/150 (41%), Gaps = 21/150 (14%)
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
GL L++ G L +I+ +A+DP NLG+A Q GD+ +A+ F + I N
Sbjct: 68 GLALIQQGNLDGAIAQFQQAIALDPLLWQAHYNLGLALGQRGDLPSAAQAFLETIALQPN 127
Query: 233 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 292
A YG++ G L + A+ L AL DP A
Sbjct: 128 FAVA-----------YGNL----------GGVLIDSQNWPQAETYLRRALSLDPNLAIAH 166
Query: 293 ANLANAYYLTGDHRSSGKCLEKAAKLEPNC 322
NL Y G+ ++ + +KA +L PN
Sbjct: 167 YNLGLIYRHQGNRDAAIQAWQKARELAPNF 196
>gi|329895776|ref|ZP_08271152.1| TPR repeat-containing protein [gamma proteobacterium IMCC3088]
gi|328922138|gb|EGG29495.1| TPR repeat-containing protein [gamma proteobacterium IMCC3088]
Length = 807
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 62/152 (40%), Gaps = 21/152 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
W LG+++ KSGRL S+ + + + P + D NL + D L
Sbjct: 149 WKLLGVLVQKSGRLSESLDIHRKAIDLAPEDADVYYNLAV---NLAD------------L 193
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
K + ++ +A L ++ L T G L+Q V A+ C + A++ P
Sbjct: 194 KRLDDAVSMFKHALSLKPEFSQAL------TNLGVVLEQLGEVEDAEICFIKAIRISPNE 247
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
A I+ NL A + G +S A LEP
Sbjct: 248 AKIYNNLGIAQHSLGKLLASESNYRIALTLEP 279
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 87/228 (38%), Gaps = 21/228 (9%)
Query: 116 ELLSLVQIHHAQCLLPESSGDNSLDKEL------EPEELEEILSKLKESMQSDTRQAVVW 169
EL + Q H L+ + +N +L + L E L ++++ A V+
Sbjct: 124 ELGNYAQAEHQALLMTQKFPENPFSWKLLGVLVQKSGRLSESLDIHRKAIDLAPEDADVY 183
Query: 170 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 229
L + L RL ++S+ L++ P + NLG+ Q G++E + CF I
Sbjct: 184 YNLAVNLADLKRLDDAVSMFKHALSLKPEFSQALTNLGVVLEQLGEVEDAEICFIKAIRI 243
Query: 230 DQNHPAALINYAALLLCKYGSVLAG--------------AGANTGEGACLDQASAVNVAK 275
N A + N + G +LA A ANT G L + + A
Sbjct: 244 SPNE-AKIYNNLGIAQHSLGKLLASESNYRIALTLEPQFAEANTNLGNVLRRLGKLTEAA 302
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
E A+K P+ A NLA G+ + A KL P+ +
Sbjct: 303 ESHCTAIKIAPELAEAHYNLATTLEDLGELEGAIAAYRDALKLRPSYL 350
>gi|50423773|ref|XP_460471.1| DEHA2F02464p [Debaryomyces hansenii CBS767]
gi|49656140|emb|CAG88778.1| DEHA2F02464p [Debaryomyces hansenii CBS767]
Length = 708
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 74/182 (40%), Gaps = 35/182 (19%)
Query: 168 VWNTLGLILLKSGRLQSSISVLSSLLAVDPN---NCDCIGNLGIAYFQSGDMEQSAKCFQ 224
+W+ +G++ + G L+ + +L +DPN + + LGI Y G ++ + +CFQ
Sbjct: 152 LWHGIGILYDRYGSLEYAEEAFVRVLELDPNFDKSNEIYFRLGIIYKHQGKLQSALECFQ 211
Query: 225 DLILKDQNHPAALIN---------------------YAALLLC--KYGSVLAGAG----- 256
IL + HP + Y +L ++ VL G
Sbjct: 212 -YILTNPPHPLTQPDVWFQIGSVLEQQKDWNGAKEAYEKVLQVNPQHAKVLQQLGCLYSQ 270
Query: 257 ---ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
A +G +N+A + LL +L+ D AH W L + + GD ++ + +
Sbjct: 271 AEPAPSGNSNQQPFQQDLNIALKYLLQSLEIDQSDAHSWYYLGRVHMIRGDFNAAYEAFQ 330
Query: 314 KA 315
+A
Sbjct: 331 QA 332
>gi|433777190|ref|YP_007307657.1| Flp pilus assembly protein TadD [Mesorhizobium australicum WSM2073]
gi|433669205|gb|AGB48281.1| Flp pilus assembly protein TadD [Mesorhizobium australicum WSM2073]
Length = 276
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 68/172 (39%), Gaps = 36/172 (20%)
Query: 177 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL---KDQNH 233
+ +G L ++ + L A +PN+ N A GD +QS + L + KD+
Sbjct: 51 MSAGELHNATAALGQSYARNPNDKRIATNFAAALQMDGDADQSLAVMRKLAIAYPKDRE- 109
Query: 234 PAALINYAALLLCKYGSVLAGAG-----------ANT----------GEGACLDQASAVN 272
+L YG LA G A T E A LDQ +
Sbjct: 110 ----------VLAAYGKALAANGQLEAALDAVRRAQTPEYPDWRLVSAEAAILDQVGQKD 159
Query: 273 VAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS 324
A++ AL+ P I +NL +Y L GD R++ + AA+ +PN S
Sbjct: 160 EARQLYRKALELKPNEPSILSNLGMSYVLEGDLRTAETYMRSAAQ-QPNADS 210
>gi|196232942|ref|ZP_03131791.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
gi|196222920|gb|EDY17441.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
Length = 743
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 73/185 (39%), Gaps = 13/185 (7%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E + + ++Q A V + LG+ L G +IS L + P+ + NLG A
Sbjct: 137 EAIEAFRRALQIGPVYAEVLSNLGIALATVGETTEAISRFREALQIRPDFPEAQNNLGNA 196
Query: 210 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL----------CKYGSV---LAGAG 256
Q G + ++ +C++ + + P A N +LL C ++ + G
Sbjct: 197 LQQQGSLAEAEECYRAALRLRPDFPDASNNLGNVLLEMGRPEEAVACHRRALELRPSYPG 256
Query: 257 ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAA 316
A G V+ + A++ DP+ ++NLA G S +CL A
Sbjct: 257 AWNSLGNACGAIGGVDESVAAYREAIRLDPRYGQAYSNLAVKLSGQGLAEESLRCLRTAV 316
Query: 317 KLEPN 321
L PN
Sbjct: 317 DLRPN 321
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 71/197 (36%), Gaps = 47/197 (23%)
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
LG L +SGRL + ++ + +LA +PN+ + LGI Q+G +E + + I +
Sbjct: 57 LGTQLHQSGRLVEAENLYTQVLAREPNHPEANRLLGIIAMQTGHLEAARQLLGKAIAGND 116
Query: 232 NHPAALIN----YAAL----------------------LLCKYGSVLAGAGANT------ 259
H A N Y AL +L G LA G T
Sbjct: 117 QHALAYSNLGEVYRALGQPREAIEAFRRALQIGPVYAEVLSNLGIALATVGETTEAISRF 176
Query: 260 ---------------GEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGD 304
G L Q ++ A+EC AAL+ P NL N G
Sbjct: 177 REALQIRPDFPEAQNNLGNALQQQGSLAEAEECYRAALRLRPDFPDASNNLGNVLLEMGR 236
Query: 305 HRSSGKCLEKAAKLEPN 321
+ C +A +L P+
Sbjct: 237 PEEAVACHRRALELRPS 253
>gi|16125706|ref|NP_420270.1| flagellin modification protein FlmG [Caulobacter crescentus CB15]
gi|221234461|ref|YP_002516897.1| FlbA protein [Caulobacter crescentus NA1000]
gi|2506426|sp|P21296.2|FLBA_CAUCR RecName: Full=Protein FlbA
gi|896458|gb|AAC62523.1| FlbA [Caulobacter crescentus CB15]
gi|13422826|gb|AAK23438.1| flagellin modification protein FlmG [Caulobacter crescentus CB15]
gi|220963633|gb|ACL94989.1| FlbA protein [Caulobacter crescentus NA1000]
Length = 596
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 23/177 (12%)
Query: 159 MQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQ 218
++ D R + W+ L + K+G SS+ + LA+ P++ G+LG F+ E
Sbjct: 84 LEKDERLGLAWHILAIAREKTGDFASSLRAYEAALALLPDHGPVAGDLGRLAFRMNMPEL 143
Query: 219 SAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGAC-LDQASAVNVAKEC 277
+AK F A L + V GAN AC L + + + A E
Sbjct: 144 AAKFF-----------------AHYRLARPDDV---EGANN--LACALRELNRESEAIEV 181
Query: 278 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRI 334
L AAL A+P+AA +W L GD S +++ +L P+ + A +R+
Sbjct: 182 LKAALGANPEAAVLWNTLGTVLCNIGDAAGSIVFFDESLRLAPDFSKAYHNRAFARL 238
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 15/154 (9%)
Query: 77 AHFLLGLMYQRLGQPLKAVSSYEKAEEILL---RCEADIAR-------PELLSLVQIHHA 126
A +L + ++ G ++ +YE A +L D+ R PEL + H+
Sbjct: 93 AWHILAIAREKTGDFASSLRAYEAALALLPDHGPVAGDLGRLAFRMNMPELAAKFFAHYR 152
Query: 127 QCLLPESSGDNSLD---KELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQ 183
+ G N+L +EL E E + LK ++ ++ AV+WNTLG +L G
Sbjct: 153 LARPDDVEGANNLACALRELNRES--EAIEVLKAALGANPEAAVLWNTLGTVLCNIGDAA 210
Query: 184 SSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDME 217
SI L + P+ N A G++E
Sbjct: 211 GSIVFFDESLRLAPDFSKAYHNRAFARLDLGEIE 244
>gi|226226814|ref|YP_002760920.1| hypothetical protein GAU_1408 [Gemmatimonas aurantiaca T-27]
gi|226090005|dbj|BAH38450.1| hypothetical protein GAU_1408 [Gemmatimonas aurantiaca T-27]
Length = 918
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 125/311 (40%), Gaps = 39/311 (12%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL-SLVQIHHAQCLL 130
P + A F GL+ QR G +A +E+A +A + E+L Q A LL
Sbjct: 141 PDDGEALFERGLIEQRAGDLRRAQRWFERAVNAGAVSDARLHLAEVLYQRGQNEQALELL 200
Query: 131 PESSGDNSL--DKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 188
+ D+ D L L + + +MQ+ TR+A N + + S +
Sbjct: 201 DQLLADSPRHADAHLLRGFLLGDMGHHERAMQA-TRRAAELNPALETVQSDLSIDSGSTA 259
Query: 189 L---SSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL 245
L SS++ VDP+ LG+A+ Q G ++ F+ I+ ++ L+ +A L
Sbjct: 260 LLNASSVMVVDPDGALARYGLGLAFRQRGYFREARAEFERAIVHGEDE--RLVQHALAEL 317
Query: 246 CKYGSVLAGAGAN--------------TGEGACLDQASAVNVAKECLLAALKADPKAAHI 291
AGA A G L Q V A + AL+ DP+ A
Sbjct: 318 DLIDGNSAGAQARYEHLLAEQESARWWNEHGVALHQGGNVASAADSYRRALRIDPRDALA 377
Query: 292 WANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAG 351
+ NL A GD ++ + L ++A+L+P + R +A LSW G
Sbjct: 378 YNNLGVALADRGDTNAAREALTRSAELDPTFVRARRNLAC--------------LLSWNG 423
Query: 352 NEMAS--ILRE 360
+A+ +LRE
Sbjct: 424 EGLAALDLLRE 434
>gi|434388288|ref|YP_007098899.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
gi|428019278|gb|AFY95372.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
Length = 1675
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 68/180 (37%), Gaps = 17/180 (9%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
++S+ D WN G +L + G+++++I L +D NLG+A+F+
Sbjct: 250 EQSLHIDPSDRFAWNNHGQVLFQLGQIRAAIDAYQKALELDSQFYQAWNNLGVAHFEQKS 309
Query: 216 MEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVLAGAGANTGEGACLDQASAVNV 273
+ + +C++ I AA N +L L + + LA T D+ A N
Sbjct: 310 FQDALRCYRAAIELAPEFQAAWCNQGKVLFFLGDFEAALAAYTKVTQLQPDFDR--AWNY 367
Query: 274 AKECLL-------------AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
L K P+ A W+N N L + + C +A L P
Sbjct: 368 CGNILFHLGELEPALRRYEMVTKLQPQLAEGWSNRGNVLLLLDRPQEALTCYTQATTLAP 427
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 78/198 (39%), Gaps = 25/198 (12%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E +E L +++++ + A+VW+ G LLK R +++V + ++ + +
Sbjct: 818 ESWDEALYSYQQALKLNASAAIVWHFQGKTLLKLQRYAEALTVYERAIELNSEDYHSWND 877
Query: 206 LGIAYFQSGDMEQSAKCFQDLI-LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGAC 264
LG+ + G E + ++ I L+ HPA G L G G A
Sbjct: 878 LGLTFAHLGRSEDAIDSYRQAIELQPDYHPA---------WHNLGKELTQLGDTDGASAA 928
Query: 265 LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS 324
++A A + P+ A W + N + G+ + E+ L+P+
Sbjct: 929 YERAIAYH-------------PQDADTWYGMGNLLWQLGELSEAMFAYEQVTNLKPDRAE 975
Query: 325 TRY--AVAVSRIKDAERS 340
Y A+ ++ ER+
Sbjct: 976 AWYRQGKALQALQQWERA 993
>gi|15679580|ref|NP_276697.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
str. Delta H]
gi|2622708|gb|AAB86058.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 351
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 21/160 (13%)
Query: 68 ARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLR-CEADIARPELLS-LVQIHH 125
A K+ + + G+M + G+PL+A+ SYE++ EI R E AR LLS L ++
Sbjct: 192 ALKIKHDPDLLYWRGVMLEVAGKPLEALESYERSLEIDPRNAEVWTARGNLLSDLGRMEE 251
Query: 126 A--------QCLLPESSGDNSLDKE----LEPEELEEILSKLKESMQSDTRQAVVWNTLG 173
A + L + N +++ LE E E L + +++ + V W +G
Sbjct: 252 AIESYNSALELALEDEQDPNVWNRKGNALLELERFNEALECYRRAIEMEPENDVYWTNMG 311
Query: 174 LILLKSGRLQSSISVLSSLLAVDPNNCD-------CIGNL 206
+ LL+ R ++ + L ++P N D C+ NL
Sbjct: 312 VALLELERFDEALEAFNRALMINPKNEDAGILREECLENL 351
>gi|83589994|ref|YP_430003.1| hypothetical protein Moth_1146 [Moorella thermoacetica ATCC 39073]
gi|83572908|gb|ABC19460.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073]
Length = 299
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 61/165 (36%), Gaps = 21/165 (12%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
KE +++ R WN LG L+ G L++++ + L + P N D + N G Y +
Sbjct: 50 KEILRTRKRIPGWWNNLGYCYLRLGELETALDCYRTALKLAPRNIDILINTGGCYQRLEQ 109
Query: 216 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 275
++ +CF K Q L+N G CL Q A
Sbjct: 110 WAEAYRCFYR-AWKYQPRDVDLLN--------------------NLGVCLVQLERPEEAL 148
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
+ AL P I NLA A + C EKA +L P
Sbjct: 149 DYYRQALALAPAEGEIIGNLAAALARCRRWPEAVTCFEKALRLLP 193
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 72/187 (38%), Gaps = 15/187 (8%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E+ E + + R + N LG+ L++ R + ++ LA+ P + IGN
Sbjct: 108 EQWAEAYRCFYRAWKYQPRDVDLLNNLGVCLVQLERPEEALDYYRQALALAPAEGEIIGN 167
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGA-------GAN 258
L A + ++ CF+ L+ ++IN AA L G A
Sbjct: 168 LAAALARCRRWPEAVTCFEK-ALRLLPEDVSIINNAAACLEALGKCYLAAPLYARALALK 226
Query: 259 TGE-------GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 311
GE ACL + + A++ + L+ P+ W L Y TGD ++ C
Sbjct: 227 PGEPQIRQNYAACLMKLGDLATARKIVEGLLRLYPEHRPAWQLLGTIYEATGDTGAAAGC 286
Query: 312 LEKAAKL 318
+A L
Sbjct: 287 YNRAWGL 293
>gi|389580598|ref|ZP_10170625.1| Tfp pilus assembly protein PilF [Desulfobacter postgatei 2ac9]
gi|389402233|gb|EIM64455.1| Tfp pilus assembly protein PilF [Desulfobacter postgatei 2ac9]
Length = 251
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 25/175 (14%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
LSKL E+ + + N+LGL + R +I V + LA+ P+ + + NLG+AY
Sbjct: 51 LSKLLEAEKLAPDDPYIQNSLGLAYMGKERDDLAIQVFNKALALKPDYTEALNNLGVAYL 110
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 271
+ + + K F +L+D +P +Y AN G A L+Q +
Sbjct: 111 REKKWDIAIKTFNK-VLEDMTYPTP--HYPL--------------ANIG-WAQLEQ-NNY 151
Query: 272 NVAKECLLAALKADP---KAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
+A++ L AL+ P KA H LA Y +G + L+K K P+ +
Sbjct: 152 PIAQKYFLKALREMPGFIKAIH---GLAQLYIRSGQTDRAIAYLDKNIKRSPDTV 203
>gi|299131799|ref|ZP_07024994.1| Tetratricopeptide TPR_2 repeat protein [Afipia sp. 1NLS2]
gi|298591936|gb|EFI52136.1| Tetratricopeptide TPR_2 repeat protein [Afipia sp. 1NLS2]
Length = 624
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 57/126 (45%), Gaps = 8/126 (6%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
L E ++++ +Q + +G++ +++GRL + ++ +A++ N + GN
Sbjct: 35 RLAEAEGYYRQALGGQRQQPDALHLIGVVFMQTGRLAQGVELIRRAIALNGTNAEYFGNF 94
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G + GD++ +A ++ I + AA + YG+VL G G C
Sbjct: 95 GTGLSRLGDLDGAADAYRRAIALNPGFAAAFHD--------YGNVLLGQGKPDEALTCYT 146
Query: 267 QASAVN 272
+A ++
Sbjct: 147 RAIGID 152
>gi|436842873|ref|YP_007327251.1| TPR repeat-containing protein [Desulfovibrio hydrothermalis AM13 =
DSM 14728]
gi|432171779|emb|CCO25152.1| TPR repeat-containing protein [Desulfovibrio hydrothermalis AM13 =
DSM 14728]
Length = 206
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
L+ E+LE + ++ Q AV W +G + ++ G + +I L + DPN
Sbjct: 70 LQREDLEGCMRYNIQATQQRPFFAVPWGNIGYVYMQQGDIDKAIKALKRAIKYDPNFVQA 129
Query: 203 IGNLGIAYFQSGDME 217
+ LG AYF G+++
Sbjct: 130 LSTLGSAYFNEGEVD 144
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 56/138 (40%), Gaps = 28/138 (20%)
Query: 204 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGA 263
GN+G Y Q GD++++ K + I D N AL S L A N GE
Sbjct: 97 GNIGYVYMQQGDIDKAIKALKRAIKYDPNFVQAL------------STLGSAYFNEGE-- 142
Query: 264 CLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
V+ E A+K W NLA Y ++ + +C++KA K
Sbjct: 143 -------VDDCIEVCEKAVKLSENFGPAWNNLALCYSEKKEYDKAVECIDKAIK------ 189
Query: 324 STRYAVAVSRIKDAERSQ 341
T + VA +K+ E+ +
Sbjct: 190 -TGFEVAPDFLKELEQYR 206
>gi|108762237|ref|YP_633061.1| hypothetical protein MXAN_4904 [Myxococcus xanthus DK 1622]
gi|14517942|gb|AAK64445.1|AF377339_6 serine/threonine kinase associate protein KapB [Myxococcus xanthus
DZF1]
gi|108466117|gb|ABF91302.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
Length = 271
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 75/165 (45%), Gaps = 14/165 (8%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P +AHAH L +Y +A+S Y A + L E+ A L + H + +
Sbjct: 42 PSSAHAHDNLATVYAEKKLFREALSEYLTA--LKLEPESATAHYNLACFLSTHAGEMAVE 99
Query: 132 ESSGDNSLDKELEPEEL------------EEILSKLKESMQSDTRQAVVWNTLGLILLKS 179
E LD E L EE + +L+ +++ D++ A + L +++
Sbjct: 100 EYKEAIELDPEYPDAHLNLGLTYADQGRVEEAMRELQTAIELDSQDAFPRHELAALMMDE 159
Query: 180 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 224
G +S+I+ L ++ ++P+N + +LGI + Q G ++ + ++
Sbjct: 160 GDYRSAITQLKEVVRLEPDNFEAQLDLGICFAQKGFYAEAERAYE 204
>gi|311745199|ref|ZP_07718984.1| hypothetical protein ALPR1_01835 [Algoriphagus sp. PR1]
gi|126577722|gb|EAZ81942.1| hypothetical protein ALPR1_01835 [Algoriphagus sp. PR1]
Length = 275
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
E+ L +++D + + + + + S I++L +L DP N D I N+GI
Sbjct: 144 EQTQKYLNRVLENDPTRLDLKTKVAMTYVSSSNPMQGITMLREILEQDPQNEDAIFNMGI 203
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAAL 237
QSG +++A+ F+DLI + HP L
Sbjct: 204 LAIQSGQYKRAAERFEDLI---KYHPQNL 229
>gi|427739904|ref|YP_007059448.1| hypothetical protein Riv7116_6574 [Rivularia sp. PCC 7116]
gi|427374945|gb|AFY58901.1| tetratricopeptide repeat protein [Rivularia sp. PCC 7116]
Length = 586
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 86/207 (41%), Gaps = 34/207 (16%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
+ L+E + + K++++ D + +N LG++ + +L+ +I+ + ++P N GN
Sbjct: 80 DRLDEAIVEFKKAIELDPNHSYAYNGLGMVYSEQNKLEKAINAYEKAVELNPKNIQASGN 139
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAA--LI----NYAALLLCKYG---------- 249
LG Y + + + +Q +I D + P LI NY A +L + G
Sbjct: 140 LGNVYAYLNQWDNAIRVYQKVI--DISPPTRYDLIAWARNYKADVLIQMGREGEAIVEYE 197
Query: 250 ---SVLAGAGANTGE-------------GACLDQASAVNVAKECLLAALKADPKAAHIWA 293
+ A NT G+ L + + A A+K K++ ++
Sbjct: 198 RAIAEYQKATQNTPSDRKDLIASNHIRLGSLLSEMGRESEAIAEYEKAIKIGYKSSSLYY 257
Query: 294 NLANAYYLTGDHRSSGKCLEKAAKLEP 320
L AYYL + + + KA ++ P
Sbjct: 258 RLGKAYYLQSNFQQASYYYRKALEINP 284
>gi|296448615|ref|ZP_06890484.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b]
gi|296253865|gb|EFH01023.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b]
Length = 285
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
+P+ + L E ++ + A +NT G+ K G+ Q +I+ S + DPN+
Sbjct: 52 DPKAASANIESLSEVIRRNP-SAEAFNTRGVAHAKVGQFQEAIADFSQAIQSDPNSAAAF 110
Query: 204 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK 247
N +A+ Q G +Q+ F I NH A I A LL +
Sbjct: 111 TNRALAFRQIGRSDQARLDFDRAITVSPNHAPAYIGRANLLRAQ 154
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 11/115 (9%)
Query: 122 QIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGR 181
Q HA+ L+ + GDN ++ ++ D A + G L+ G+
Sbjct: 176 QAFHARGLIHQKRGDNL-----------RAVTDFDNAIDRDPFAAAPYQARGESLVALGK 224
Query: 182 LQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 236
+I ++ L VD + LG+AY + G+ ++A+ +Q + D N P A
Sbjct: 225 YDKAIEDFNAALNVDNKSAPAWAWLGLAYDRQGNRAKAAESYQRALSIDPNQPVA 279
>gi|125975162|ref|YP_001039072.1| peptidase S41 [Clostridium thermocellum ATCC 27405]
gi|256003175|ref|ZP_05428167.1| peptidase S41 [Clostridium thermocellum DSM 2360]
gi|281418417|ref|ZP_06249436.1| peptidase S41 [Clostridium thermocellum JW20]
gi|385777647|ref|YP_005686812.1| peptidase S41 [Clostridium thermocellum DSM 1313]
gi|419722800|ref|ZP_14249937.1| peptidase S41 [Clostridium thermocellum AD2]
gi|419726301|ref|ZP_14253324.1| peptidase S41 [Clostridium thermocellum YS]
gi|125715387|gb|ABN53879.1| peptidase S41 [Clostridium thermocellum ATCC 27405]
gi|255992866|gb|EEU02956.1| peptidase S41 [Clostridium thermocellum DSM 2360]
gi|281407501|gb|EFB37760.1| peptidase S41 [Clostridium thermocellum JW20]
gi|316939327|gb|ADU73361.1| peptidase S41 [Clostridium thermocellum DSM 1313]
gi|380770353|gb|EIC04250.1| peptidase S41 [Clostridium thermocellum YS]
gi|380781180|gb|EIC10841.1| peptidase S41 [Clostridium thermocellum AD2]
Length = 745
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 107/264 (40%), Gaps = 46/264 (17%)
Query: 74 NAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI---LLRCE-------ADIARPELLSLVQI 123
NA A+ GL LG+ +A+ ++KA EI L + A + R E SL
Sbjct: 59 NAMAYLGKGLALDALGKYEEALEFFDKAIEINKDLAKAYNAKGTTLASLERYE-ESLENF 117
Query: 124 HHAQCLLPESS--------GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLI 175
A L P++S G N+L + EE + +++++ + R V ++ G
Sbjct: 118 KKAAELKPKNSAYQNDVAYGLNNLGR------FEEAIQYAEKALKLNPRSGVAYSNKGFA 171
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
L G+L +I + + P + N IA F+ G E++ + ++ D +
Sbjct: 172 LDALGKLDEAIECYDKAIELSPTYTNAYYNKSIAVFKMGKTEEAIELLDKVLEIDPDDLD 231
Query: 236 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 295
A+ T +G CL++ A EC A++ PK + +
Sbjct: 232 AI---------------------TSKGYCLNELGKYEKAIECFDTAIEKYPKDPYPYVCK 270
Query: 296 ANAYYLTGDHRSSGKCLEKAAKLE 319
A + Y G + ++ + KA KLE
Sbjct: 271 ATSLYYLGKYDNALEECNKAIKLE 294
>gi|226496177|ref|NP_001145720.1| uncharacterized protein LOC100279224 [Zea mays]
gi|224029355|gb|ACN33753.1| unknown [Zea mays]
gi|414886537|tpg|DAA62551.1| TPA: hypothetical protein ZEAMMB73_083629 [Zea mays]
Length = 321
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 62/135 (45%)
Query: 102 EEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQS 161
++L+R E D++ EL V+ A G L ++ P ++ + + + +
Sbjct: 163 RQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAAIKYLQQAIDKWDRD 222
Query: 162 DTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 221
+ A V+N LG+ + +L +I + + P NLG AY Q D++ + K
Sbjct: 223 EQDLAQVYNALGVSYKRENKLDKAIQQFQKAVELQPGYVTAWNNLGDAYEQQKDLKSALK 282
Query: 222 CFQDLILKDQNHPAA 236
F++++L D N+ A
Sbjct: 283 AFEEVLLFDPNNKVA 297
>gi|168044085|ref|XP_001774513.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674225|gb|EDQ60737.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 932
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 86/198 (43%), Gaps = 24/198 (12%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
+ + L K +E+++ + + A + + L + G + +I S+ + + PN CD N
Sbjct: 56 HDFDMCLVKNEEAIRIEPKFAECYGNMANALKEKGDIDLAILYYSAAIELKPNFCDAWSN 115
Query: 206 LGIAYFQSGDMEQSAKCFQD-LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGAC 264
L A+ + G ++++A+C Q LIL + L A +N G
Sbjct: 116 LASAFMRKGRLQEAAECCQHALILNPR--------------------LVDAHSNLGN--L 153
Query: 265 LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS 324
L + A C + A++ P A W+NLA G+ + + ++A +L+P+ +
Sbjct: 154 LKAQGLTHHAYLCYVEAIRLQPTFAIAWSNLAGLLMEAGELQKALTYYKEAIRLKPSFVD 213
Query: 325 TRYAVAVSRIKDAERSQE 342
+ + +K R QE
Sbjct: 214 AHLNLG-NVLKAMNRHQE 230
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 107/266 (40%), Gaps = 36/266 (13%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ------ 122
R P AH LG + + + + +A++ Y ++ I LR + IA L S+
Sbjct: 206 RLKPSFVDAHLNLGNVLKAMNRHQEAIACYNRS--IQLRPDYAIAYGNLASVYYEQGLLD 263
Query: 123 ---IHHAQCLLPESS---GDNSLDKEL-EPEELEEILSKLKESMQSDTRQAVVWNTLGLI 175
+H+ Q LL +SS N+L L + +++ +S ++ +Q LG I
Sbjct: 264 HAIVHYKQALLFDSSFIEAYNNLGNALKDAGQVDGAISCYEKCLQLQDSHPQALTNLGNI 323
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
++ + ++ + + L V NL Y Q G+ + C+ +++ D
Sbjct: 324 YMECNMVSTAATFYKATLNVTTGLSAPYSNLATIYKQQGNYADAIACYNEVMRVDPMAAD 383
Query: 236 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 295
L+N G L + V+ A + + A+ P A ANL
Sbjct: 384 GLVN---------------------RGNTLKEIGRVSEAIQDYIRAVAIRPTMAEAHANL 422
Query: 296 ANAYYLTGDHRSSGKCLEKAAKLEPN 321
A+AY +G ++ K ++A L P+
Sbjct: 423 ASAYKDSGHVEAAIKSYKQALFLRPD 448
>gi|91204151|emb|CAJ71804.1| conserved hypothetical tpr repeat protein [Candidatus Kuenenia
stuttgartiensis]
Length = 817
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEA-DIARPELLSLVQIH------ 124
P +A A+ +G +Y++ Q AV YEKA +RC D L L+ +
Sbjct: 484 PYHADAYNNIGNIYKKKKQYPAAVKMYEKA----IRCNPFDFRYHSNLGLIYLETKNYRE 539
Query: 125 ------HAQCLLPE-SSGDNSLDKEL-EPEELEEILSKLKESMQSDTRQAVVWNTLGLIL 176
A + P+ SS NSL L E + + K ++Q D A + N+LG++
Sbjct: 540 SVDAFLKALKIAPDKSSTHNSLGNVLKEMGDFDGAEEAYKTALQLDPADANIHNSLGMLY 599
Query: 177 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 221
+ ++ + + +DP NLGIAY GD E++A+
Sbjct: 600 TNMKQFDKAMREFDTAIRLDPKMASAYNNLGIAYANKGDGEKAAE 644
>gi|434398850|ref|YP_007132854.1| glycosyl transferase family 2 [Stanieria cyanosphaera PCC 7437]
gi|428269947|gb|AFZ35888.1| glycosyl transferase family 2 [Stanieria cyanosphaera PCC 7437]
Length = 397
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 54 EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKA--EEILLRCEAD 111
++ + LK GL + P ++ LG Y + G KA Y+KA + IL
Sbjct: 219 KQGIKFLKQGLKSNQAEAPVLYELYYSLGNAYLKQGNFAKAQEQYQKAISQNIL------ 272
Query: 112 IARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNT 171
P+L I+ A L +L K ++L E + KL D A+ +
Sbjct: 273 ---PKLKIGGYINLAGLL-------QNLGKLTTAKQLYEAVLKL------DPNLAIAYYN 316
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-LKD 230
LG+ L + +I + ++PNN D NLG+ Y+Q+G +++S + F+ I L
Sbjct: 317 LGMTLKGLKQYPEAIKAYQKAIELEPNNADAYQNLGVVYYQAGYLKESLETFEKAINLHQ 376
Query: 231 QNHPAA 236
+P A
Sbjct: 377 TKNPNA 382
>gi|149585238|ref|XP_001516104.1| PREDICTED: tetratricopeptide repeat protein 37, partial
[Ornithorhynchus anatinus]
Length = 640
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL--GLILLKSGRLQSSISVL 189
E +G ++D +E E++E L+ L + + + V W L GL LK+G+ +++ L
Sbjct: 498 EEAGSAAVDLSVELEDVETALAILTKVTEKASAGTVKWAWLRRGLYYLKAGQHSQAVADL 557
Query: 190 SSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 223
+ L DP + +C +LG AY G + K F
Sbjct: 558 QAALRADPKDYNCWESLGEAYLSRGGYTTALKSF 591
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%)
Query: 278 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
L AAL+ADPK + W +L AY G + ++ K KA+ L P + + VA
Sbjct: 557 LQAALRADPKDYNCWESLGEAYLSRGGYTTALKSFTKASDLNPESTYSVFKVA 609
>gi|357131539|ref|XP_003567394.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC-like [Brachypodium
distachyon]
Length = 980
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 114/289 (39%), Gaps = 31/289 (10%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC-EADIARPELLSLVQIHHAQCLL 130
P +A+A + + ++ + G P KAV Y++A + +A + L V +H +
Sbjct: 223 PSSANAWYYIAGLFMQWGDPSKAVLYYKEAIKYKPSFYDAHLNLGNLYKAVGMHQDAIVC 282
Query: 131 PESSGDNSLDKEL----------EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSG 180
+++ S D ++ E +L+ + ++++ ++ +N LG L +G
Sbjct: 283 YQNAVRASPDNDIAYGTLANTYYEQGQLDLAIRSYRQAINCNSSYVEAYNNLGNALKDAG 342
Query: 181 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 240
+ +I LA+ P++ + NLG Y + M+ +A + + A N
Sbjct: 343 KSDEAIGCYEKCLALQPSHPQALTNLGNVYMERNMMDVAASLYMATLTVTTGLSAPYNNL 402
Query: 241 AALL---------LCKYGSVL----AGAGANTGEGACLDQASAVNVAKECLLAALKADPK 287
A + L Y VL A G L + V+ A + A+ P
Sbjct: 403 AIIYKQQGEYDRALTCYNEVLRIDPTAADCLVNRGNTLKETGRVSEAIQDYFRAIAIRPA 462
Query: 288 AAHIWANLANAYYLTG-------DHRSSGKCLEKAAKLEPNCMSTRYAV 329
A ANLA+AY TG +R + +C + N + TR V
Sbjct: 463 MAEAHANLASAYKDTGLLEAAIVSYRHALQCRGDFPEATCNLLHTRQCV 511
>gi|440804030|gb|ELR24913.1| tetratricopeptide repeat domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 260
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
G LL GR Q ++S L ++ + PN+ D + G Y GD + + + F ++ D N
Sbjct: 142 GDALLCLGRHQEALSYLDRVIEMRPNHIDALLARGEVYMDLGDDKSAMRDFNEVRFWDPN 201
Query: 233 HPAALINYAALLLCKYGSVLAG 254
+P AL YAA LL K +AG
Sbjct: 202 NPDALF-YAASLLRKTMKKIAG 222
>gi|254413330|ref|ZP_05027101.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196179950|gb|EDX74943.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 1015
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 77/196 (39%), Gaps = 25/196 (12%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
++ + LS L +S+ D + +LGL+L K G + +I + ++P + N
Sbjct: 303 QQYQNCLSHLLQSLAIDPASGLHHYSLGLVLEKIGNIPQAIEAYQKSIQLNPKLINAYNN 362
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
LG+ Q+ + + ++ + + +H + IN LL L
Sbjct: 363 LGVILCQTDQFQDAEYVYRQAVTANPSHFGSYINLGNLL--------------------L 402
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+Q ++ A E AL+ P+ + NL AY L D S A + N
Sbjct: 403 EQHRNIDEAIELYQKALQLKPRDPDVMQNLGIAYDLKHDPAKSAFYFGNYAHIRQN---- 458
Query: 326 RYAVAVSRIKDAERSQ 341
Y A+ + + ++Q
Sbjct: 459 -YEAAIEQYEKGLKTQ 473
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 105/252 (41%), Gaps = 30/252 (11%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P + H+ LGL+ +++G +A+ +Y+K+ ++ P+L++
Sbjct: 320 PASGLHHYSLGLVLEKIGNIPQAIEAYQKSIQL---------NPKLIN------------ 358
Query: 132 ESSGDNSLDKEL-EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGR-LQSSISVL 189
N+L L + ++ ++ ++++ ++ + LG +LL+ R + +I +
Sbjct: 359 ---AYNNLGVILCQTDQFQDAEYVYRQAVTANPSHFGSYINLGNLLLEQHRNIDEAIELY 415
Query: 190 SSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYG 249
L + P + D + NLGIAY D +SA F + QN+ AA+ Y L + G
Sbjct: 416 QKALQLKPRDPDVMQNLGIAYDLKHDPAKSAFYFGNYAHIRQNYEAAIEQYEKGLKTQIG 475
Query: 250 SVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 309
+ C ++ + A LK PK ++ L A G +
Sbjct: 476 K----SSIYINLADCYEKLNQEEKAINTYHEGLKHYPKTPRLYFCLIVALQNFGRIHEAI 531
Query: 310 KCLEKAAKLEPN 321
+AA+L PN
Sbjct: 532 TVASQAAQLLPN 543
>gi|222053745|ref|YP_002536107.1| hypothetical protein Geob_0641 [Geobacter daltonii FRC-32]
gi|221563034|gb|ACM19006.1| TPR repeat-containing protein [Geobacter daltonii FRC-32]
Length = 911
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 19/167 (11%)
Query: 71 MPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPEL-LSLV-------- 121
+P +A +F +G ++L +P++A + Y +A L+ + D A L LV
Sbjct: 427 LPDSAVINFNMGNTMKKLERPIEATAYYREA----LKTDPDFAEAHYNLGLVLQGQRLFD 482
Query: 122 ----QIHHAQCLLPESSGD--NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLI 175
+ A L P +G N D + ++E+ ++ + + D + A N+LG
Sbjct: 483 QALDEYERALALRPAHAGTLHNMGDILQDRGQVEQAVACYDKVLALDPQLANTHNSLGNA 542
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKC 222
LL + +I+ +A+DP+N NLG A+ GD++Q+ C
Sbjct: 543 LLCQEKYPEAIAAYERAMAIDPDNPMIHNNLGAAFKDKGDLDQAIAC 589
>gi|302339094|ref|YP_003804300.1| hypothetical protein Spirs_2596 [Spirochaeta smaragdinae DSM 11293]
gi|301636279|gb|ADK81706.1| Tetratricopeptide TPR_2 repeat protein [Spirochaeta smaragdinae DSM
11293]
Length = 369
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 45/83 (54%)
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
L ++++ + ++ ++N L + L++ G VL A++P N I N+ I ++
Sbjct: 280 LYKALELEDKEVDIYNELAICLMELGEYDQCRVVLEKAKAIEPQNVKIISNIAILELKTD 339
Query: 215 DMEQSAKCFQDLILKDQNHPAAL 237
+ E++ +CF++++ D P AL
Sbjct: 340 NNEEAQRCFREILKIDPQDPLAL 362
>gi|209544340|ref|YP_002276569.1| sulfotransferase [Gluconacetobacter diazotrophicus PAl 5]
gi|209532017|gb|ACI51954.1| sulfotransferase [Gluconacetobacter diazotrophicus PAl 5]
Length = 648
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 63/149 (42%), Gaps = 13/149 (8%)
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
LG I + G+ +S+I +L LA P N + LG+A +G E + CF+ +
Sbjct: 48 LGTIHARQGKFESAIPLLRRALARMPANAEGYNVLGMALRDAGQAEDAIACFRRAVAIRP 107
Query: 232 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLD-QASAVNVAKECLLAALKADPKAAH 290
+H A N L+ G AGA A LD Q +A+ + AL ADP
Sbjct: 108 DHQGARTNLGNALVA--GGDRAGAIAQFRALLTLDTQLAAIADYR----TALAADPADVE 161
Query: 291 IWANLANAYYLTGDHRSSGKCLEKAAKLE 319
L A R+ G+C E AA +
Sbjct: 162 TLIRLGAAL------RTIGRCEEAAAHFQ 184
>gi|94968710|ref|YP_590758.1| hypothetical protein Acid345_1683 [Candidatus Koribacter versatilis
Ellin345]
gi|94550760|gb|ABF40684.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
Ellin345]
Length = 942
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 62/159 (38%), Gaps = 21/159 (13%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
WN G+ LL G L+ + + + DPNN D NLG Q GDME++ + +
Sbjct: 720 WNDYGIGLLLQGDLKGAAAAFVKVTEADPNNPDGWVNLGRVAVQEGDMERAREVLTKALK 779
Query: 229 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 288
+ N A YA VL G G A + L A L PK
Sbjct: 780 INANLARARFFYA--------RVLRSDGNYDG-------------AAQELQAVLAQYPKD 818
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 327
+ +L Y+L + + L++ +++P + Y
Sbjct: 819 RVVRNDLGRIYFLQRKYDQAIAELQQVMEVDPEDLQANY 857
>gi|308175219|ref|YP_003921924.1| hypothetical protein BAMF_3328 [Bacillus amyloliquefaciens DSM 7]
gi|384161103|ref|YP_005543176.1| hypothetical protein BAMTA208_17655 [Bacillus amyloliquefaciens
TA208]
gi|384165997|ref|YP_005547376.1| hypothetical protein LL3_03621 [Bacillus amyloliquefaciens LL3]
gi|384170192|ref|YP_005551570.1| hypothetical protein BAXH7_03610 [Bacillus amyloliquefaciens XH7]
gi|307608083|emb|CBI44454.1| conserved hypothetical protein [Bacillus amyloliquefaciens DSM 7]
gi|328555191|gb|AEB25683.1| hypothetical protein BAMTA208_17655 [Bacillus amyloliquefaciens
TA208]
gi|328913552|gb|AEB65148.1| hypothetical protein LL3_03621 [Bacillus amyloliquefaciens LL3]
gi|341829471|gb|AEK90722.1| hypothetical protein BAXH7_03610 [Bacillus amyloliquefaciens XH7]
Length = 484
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
LL+SG+L ++ +L + A P NL +AYF SG++ ++ + +++ K++ +
Sbjct: 163 LLESGQLHEAVVMLEEITADYPELWSAYNNLALAYFYSGNVTKAKQTVFEVLEKNEGNLH 222
Query: 236 ALINYAALLLCKY 248
AL NY L+ C Y
Sbjct: 223 ALCNY--LVFCYY 233
>gi|87311178|ref|ZP_01093301.1| O-linked GlcNAc transferase [Blastopirellula marina DSM 3645]
gi|87286086|gb|EAQ77997.1| O-linked GlcNAc transferase [Blastopirellula marina DSM 3645]
Length = 326
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 77/201 (38%), Gaps = 26/201 (12%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI-GNLG 207
+E L L+ ++ + + W G ++ +SGR + + L P I +LG
Sbjct: 20 DEALEHLEHALGLEPKHGQAWFAKGCVMSESGRTRDAAHCYLQALQYAPAYAALILFDLG 79
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 267
+ G+ E++ +CFQ + D + IN +G LD
Sbjct: 80 NCFRDMGEGERALECFQSVTELDPENADGWIN---------------------QGVVLDN 118
Query: 268 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 327
A C AA++ P+ WAN N + + C EKA +L P +R
Sbjct: 119 LGRPEEAIPCYDAAIRLAPEDVDAWANRGNCLRALCEFTDAIACYEKALELNPQ---SRA 175
Query: 328 AVAVSRIKDAERSQEPTEQLS 348
A+A I AE EP LS
Sbjct: 176 ALAGRGICVAELG-EPERGLS 195
>gi|428775101|ref|YP_007166888.1| hypothetical protein PCC7418_0444 [Halothece sp. PCC 7418]
gi|428689380|gb|AFZ42674.1| Tetratricopeptide TPR_1 repeat-containing protein [Halothece sp.
PCC 7418]
Length = 314
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 106/244 (43%), Gaps = 36/244 (14%)
Query: 23 SRISSKMDSALEFGVDADGDQS-----GLGTSSSSREEKVSSLKTGLVHVARK------- 70
S+I + +D A++ DQ+ + S ++ L G +H+ARK
Sbjct: 8 SQIQADLDEAIQLKNKGQLDQALNKIEQILIISPDHAPTLNQL--GAIHLARKEFEKAIA 65
Query: 71 --------MPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ 122
PKNA A+ LG Y + +A+++Y+KA EI + + + + Q
Sbjct: 66 AYQKNIEFKPKNAQAYHGLGDAYLGMNNFTEAITAYQKALEINPQLPPYVHKKLGDAFQQ 125
Query: 123 IHHAQC----------LLPESSGDNSL--DKELEPEELEEILSKLKESMQSDTR-QAVVW 169
Q L P +G ++ D L+ +E ++ +++++ + + V
Sbjct: 126 AGQKQAAITAYQKAVELNPNQAGFYNVLGDVYLQTNNPKEAITAYQKALEINPQLPPYVH 185
Query: 170 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-L 228
LG L + G+++ +I+ S +A++P+ LG YFQ+ + ++ F+ + L
Sbjct: 186 KKLGDALKQGGQIEEAIATYQSAIALNPDKPWLYHALGQIYFQTNQLAEAVTAFETFVEL 245
Query: 229 KDQN 232
K+ N
Sbjct: 246 KNDN 249
>gi|406910817|gb|EKD50743.1| hypothetical protein ACD_62C00440G0005 [uncultured bacterium]
Length = 278
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQS-- 213
K+ + +D A V N+LGLI ++ G S+ S L L ++ N +C NLG Y +S
Sbjct: 149 KQMLTTDPNNASVQNSLGLIYIQKGLYSSATSYLEKALELNENCPECFNNLG--YLKSLL 206
Query: 214 GDMEQSAKCFQDLILKDQNHPAALINYAAL 243
G+ ++A F+ + N+P N A L
Sbjct: 207 GETVEAAAYFEKAMGLSPNYPDPYFNLAVL 236
>gi|339484229|ref|YP_004696015.1| hypothetical protein Nit79A3_2865 [Nitrosomonas sp. Is79A3]
gi|338806374|gb|AEJ02616.1| Tetratricopeptide TPR_2 repeat-containing protein [Nitrosomonas sp.
Is79A3]
Length = 440
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 18/156 (11%)
Query: 99 EKAEEILLR-CEADIARPELLSLVQIHHAQCLLPESSGDN---SLDKE------------ 142
++AE+ LR C P+ L L+ I +AQ +++ DN ++DK+
Sbjct: 31 QEAEKHCLRICTVAPNLPDALHLLAIIYAQTGHYQAANDNFFKAIDKDPSRADFYSNYGN 90
Query: 143 --LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNC 200
E +EE + +S+ D +A N LG + L RL+ ++ L + P
Sbjct: 91 ALWEQNRIEEAIHYCHQSLALDANRAEAHNILGNVYLSQNRLEEAVISFRKALEIHPTYV 150
Query: 201 DCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 236
+ NLG A + E + C++ + +N+P A
Sbjct: 151 HVLNNLGNALQKLNQAEDAVNCYRQALKLQENYPEA 186
>gi|392413291|ref|YP_006449898.1| cytochrome c biogenesis factor [Desulfomonile tiedjei DSM 6799]
gi|390626427|gb|AFM27634.1| cytochrome c biogenesis factor [Desulfomonile tiedjei DSM 6799]
Length = 195
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
EL+ +S L++ + A V LG G + ++ L V+P N D ++
Sbjct: 51 ELKARISGLEKMLAVRPNDADVLVQLGNDYFDLGNHEKAVDYYRRSLEVNPGNADVWTDM 110
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
GI+ + G ++SA F+ + D NHP AL N +L
Sbjct: 111 GISLRKLGKPQESADAFRKALEVDPNHPMALFNLGIIL 148
>gi|291296105|ref|YP_003507503.1| hypothetical protein [Meiothermus ruber DSM 1279]
gi|290471064|gb|ADD28483.1| Tetratricopeptide TPR_2 repeat protein [Meiothermus ruber DSM 1279]
Length = 354
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 86/203 (42%), Gaps = 29/203 (14%)
Query: 118 LSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILL 177
++L Q++ Q LL E ++E L++ LS L+E+ + + + A ++ T G +L
Sbjct: 99 VALAQVYVRQYLLSE-------NREASKGLLDQALSVLREAERVNAKYAPIYATRGTVLA 151
Query: 178 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL 237
+L ++ ++ LA+ + L Y + G +++ K + + + +P+
Sbjct: 152 YQNKLDQAVESINRSLALK-DEPVVRALLADIYIRQGKWDEALKHYDEAVKAAPKNPSLR 210
Query: 238 INYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 297
I Y +LLL + V++A E L A+ P A W +
Sbjct: 211 IKYGSLLLLR---------------------GNVDLAIEHLDQAVILSPGNAEAWLRRGD 249
Query: 298 AYYLTGDHRSSGKCLEKAAKLEP 320
AYY D + +G ++ L P
Sbjct: 250 AYYEKKDWQQAGVSYQQTVALSP 272
>gi|427714622|ref|YP_007063246.1| hypothetical protein Syn6312_3691 [Synechococcus sp. PCC 6312]
gi|427378751|gb|AFY62703.1| TPR repeat-containing protein [Synechococcus sp. PCC 6312]
Length = 943
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 71/176 (40%), Gaps = 21/176 (11%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E+ + + + +Q +N LG L +S + +I +A+ PNN N
Sbjct: 57 EKYPDAIQHYQRVIQLQPDNPTAYNDLGNALQRSKNILQAIPCYQKAIALKPNNAQAYSN 116
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
LG+AY G E++ ++ I + +P N G + L
Sbjct: 117 LGVAYQDLGRYEEAQAAYRQGIQVEPTYPHTYYNL---------------GKSFQSQDRL 161
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
++ A+ + C ++ DP A + N+ A+Y G S + EKA +++P+
Sbjct: 162 EE--AILTYQRC----IQIDPSYAMAYNNMGLAFYDLGQVEPSLRAYEKALEIDPS 211
>gi|15678111|ref|NP_275226.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
str. Delta H]
gi|2621120|gb|AAB84589.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 379
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 114/309 (36%), Gaps = 39/309 (12%)
Query: 177 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 236
LK G+ + ++ L PNN + + I + E++ +C++ ILK+ A
Sbjct: 27 LKQGKYKEALKEFRKALKARPNNPEILHYNAITLLKLKRPEKALECYEK-ILKNNPKLAE 85
Query: 237 LINYAALLLCKYGSVLAG--------------AGANTGEGACLDQASAVNVAKECLLAAL 282
N L+L + G AGA + L + + A EC AL
Sbjct: 86 AWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKALVLKELGRYDEALECYEKAL 145
Query: 283 KADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP---NCMSTRYAVAVSRIKDAER 339
+ +PK A W N + ++ + KC EKA +L P T+ + + +K E
Sbjct: 146 QINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKNYRAWGTK-GITLHNLKIYEE 204
Query: 340 SQEPTEQLSWAGNEMASILREGDPVQIEPP--IAWAGFAAVQKTHHEVAAAFETEENELS 397
+ + +++ +Q+ P AW V + E E L
Sbjct: 205 ALKCYDKV----------------LQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQ 248
Query: 398 KMEECAGA--GESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 455
+ A A + L + A EC AL+ DP+ W N G ++ +
Sbjct: 249 INPKLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKYKDAL 308
Query: 456 KCLEKVLMV 464
+C +K L +
Sbjct: 309 ECFQKALEI 317
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 65/177 (36%), Gaps = 21/177 (11%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
EE L + +Q + + WN GL+ + GR S+ L ++P + N G+
Sbjct: 203 EEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINPKLAEAWNNKGV 262
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
+ G E++ +C++ + D N +G L++
Sbjct: 263 VLSELGRYEEALECYEKALEIDPEDDKTWNN---------------------KGLVLEEL 301
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
A EC AL+ +P+ A W S KC +KA KL P +T
Sbjct: 302 GKYKDALECFQKALEINPEFADAWKWKGIILEDLKKPEESLKCYKKALKLNPPKQNT 358
>gi|326438090|gb|EGD83660.1| hypothetical protein PTSG_12145 [Salpingoeca sp. ATCC 50818]
Length = 825
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 100/248 (40%), Gaps = 30/248 (12%)
Query: 81 LGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLD 140
+GL+ + G+ +AV+ YE A + LR E + R ++ +++ + ++ G+
Sbjct: 282 VGLVLYQFGEHNRAVAYYETALAVYLRTEGEKGR----NVAALYNNLGIAYKNKGEYDKA 337
Query: 141 KELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAV----- 195
++L + + E S A + LGL G +I+ LAV
Sbjct: 338 IYFYEKDLAITVETVGEKHPS---TANTYGNLGLAYYSKGEYDKAIAYHEKALAVFVETL 394
Query: 196 ---DPNNCDCIGNLGIAYFQSGDMEQSAKCFQ-DLILK----DQNHPAALINYAALLLCK 247
P+ NLG+AY GD +++ ++ DL + + HP+ Y L
Sbjct: 395 GEKHPSTASTFNNLGLAYGSKGDYDRAIAFYEKDLAITVETLGEKHPSTARTYNNL---- 450
Query: 248 YGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRS 307
G G A ++ AV V E L + P A+ + NL NAY G++
Sbjct: 451 -GEAYRHKGEYDRAIAFYEKDLAVTV--ETL---GEKHPSTANTYNNLGNAYDNKGEYDR 504
Query: 308 SGKCLEKA 315
+ EKA
Sbjct: 505 AIAFYEKA 512
>gi|294674663|ref|YP_003575279.1| hypothetical protein PRU_2004 [Prevotella ruminicola 23]
gi|294471998|gb|ADE81387.1| tetratricopeptide repeat protein [Prevotella ruminicola 23]
Length = 681
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 24/157 (15%)
Query: 41 GDQSGLGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEK 100
GDQ + ++ + LKT LV + K P + + LG++Y R G KA+ Y+K
Sbjct: 232 GDQKAYYLMQNIVDDAFALLKTKLVIQSNKNPNDQAWPYYLGVVYDRKGATKKAIEYYKK 291
Query: 101 AEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQ 160
A EI S++ A C ES G+ L L+ L++++Q
Sbjct: 292 AAEI-----------NTTSVIFRSIAVCY--ESIGEYDL-----------ALTYLEKTLQ 327
Query: 161 SDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 197
D + T + +SGR+ +I V+ ++ P
Sbjct: 328 MDPKDVRAQATKADVYYESGRVDDAIRVMDDIINSYP 364
>gi|330509115|ref|YP_004385543.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
gi|328929923|gb|AEB69725.1| TPR-repeat protein [Methanosaeta concilii GP6]
Length = 1140
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 68/170 (40%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E + ++Q D A W + G L GR + ++ L +DPN G
Sbjct: 351 DESIEAYDRALQLDPSDARAWTSKGHALRSLGRNREAVLAYDRALKIDPNRATAWSGKGA 410
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
A G +S + + +++ + P + AAL + + A + G + A
Sbjct: 411 ALRDQGRYNESVQAYDEVLRAVERDPTYRYSSAALAVADAWLGKSKAESLMGPDKAEEAA 470
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 318
A N + + A++ DP++A W NA + S + E+A ++
Sbjct: 471 IAYNESLQAYEKAIQIDPESARAWIGRGNALLSLEKYSDSKEAYERAVEV 520
>gi|197102526|ref|NP_001127296.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit [Pongo abelii]
gi|55727502|emb|CAH90506.1| hypothetical protein [Pongo abelii]
Length = 471
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 63/158 (39%), Gaps = 21/158 (13%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
A ++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 89 AEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY-- 146
Query: 226 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 285
+ + Y L C + G L + AK C L A++
Sbjct: 147 ---------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQ 187
Query: 286 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
P A W+NL + G+ + EKA L+PN +
Sbjct: 188 PNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 265
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 326 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 371
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 372 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 431
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 432 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|326433989|gb|EGD79559.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
Length = 602
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 109/263 (41%), Gaps = 32/263 (12%)
Query: 67 VARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHA 126
+ K P A + LG +Y G+ KA++ YEKA + +R EA + S ++
Sbjct: 221 LGEKHPSTADTYDNLGTVYASKGEYDKAIAFYEKA--LAIRVEAWGEKHP--STADTYNN 276
Query: 127 QCLLPESSGDNSLDKELEPEELEEILSKLKESM-QSDTRQAVVWNTLGLILLKSGRLQSS 185
+ G+ DK + E E+ L+ E++ + A +N LG G +
Sbjct: 277 LSAAYRNKGE--YDKAI--EFYEKALAVFVETLGEKHLSTATTYNNLGNTYDSKGEYDKA 332
Query: 186 ISVLSSLLAV--------DPNNCDCIGNLGIAYFQSGDMEQSAKCFQD-LILK----DQN 232
I++ LAV P+ NLGIAYF G+ +++ ++ L ++ +
Sbjct: 333 IALYEKALAVYVETLGEKHPSTAATYNNLGIAYFSKGEYDKAIAYYEKALAIRVETLGET 392
Query: 233 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 292
HP+ Y L G+ G A ++A A+ V E L + P A +
Sbjct: 393 HPSTASTYNNL-----GNTYDRKGEYDKAIAFYEKALAIYV--ETL---GEKHPSTAMTY 442
Query: 293 ANLANAYYLTGDHRSSGKCLEKA 315
NL +AY G++ + EKA
Sbjct: 443 NNLGSAYNNKGEYDKAIAFYEKA 465
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 100/248 (40%), Gaps = 30/248 (12%)
Query: 81 LGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLD 140
+GL+ + G+ KA++ YE A I LR E + R + +A C S G++ D
Sbjct: 151 VGLVLYQFGEHDKAIAFYETALPIYLRTEGEKGRNVAAPYGNLGNAYC----SKGEH--D 204
Query: 141 KELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAV----- 195
K + E + + +++ + A ++ LG + G +I+ LA+
Sbjct: 205 KAIAYHE-KALAIRVETLGEKHPSTADTYDNLGTVYASKGEYDKAIAFYEKALAIRVEAW 263
Query: 196 ---DPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALINYAALLLCK 247
P+ D NL AY G+ +++ + ++ + + H + Y L
Sbjct: 264 GEKHPSTADTYNNLSAAYRNKGEYDKAIEFYEKALAVFVETLGEKHLSTATTYNNL---- 319
Query: 248 YGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRS 307
G+ G A ++A AV V E L + P A + NL AY+ G++
Sbjct: 320 -GNTYDSKGEYDKAIALYEKALAVYV--ETL---GEKHPSTAATYNNLGIAYFSKGEYDK 373
Query: 308 SGKCLEKA 315
+ EKA
Sbjct: 374 AIAYYEKA 381
>gi|333987252|ref|YP_004519859.1| hypothetical protein MSWAN_1037 [Methanobacterium sp. SWAN-1]
gi|333825396|gb|AEG18058.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 369
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 75/192 (39%), Gaps = 17/192 (8%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
WN ++ L+ R + ++ + L VDP N + +A+ +S + ++
Sbjct: 154 WNDRAMVSLRLNRYEEALEYYDNALKVDPQNVEAFMGKYMAFMGLDKYPESLEYLDKVLE 213
Query: 229 KDQNHPAALINYAALL--LCKYGSVLAGAG-----------ANTGEGACLDQASAVNVAK 275
+ H + + LL L +Y L + A +G L + A
Sbjct: 214 IESQHTSLWASRGILLNQLGRYEEALRCSNKVLKLDPKEPRAWKTKGKSLVELKRPEEAL 273
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 335
+ L ALK DPK++ +W N A + S C EKA L PN + A +S
Sbjct: 274 KSLEEALKLDPKSSDVWFNKGIALSQLEKFKESLNCFEKALNLNPNNVQACTAKGLS--- 330
Query: 336 DAERSQEPTEQL 347
E+ + P E L
Sbjct: 331 -LEKLENPEEAL 341
>gi|384449042|ref|YP_005661644.1| hypothetical protein CPK_ORF00096 [Chlamydophila pneumoniae LPCoLN]
gi|269302480|gb|ACZ32580.1| tetratricopeptide repeat family protein [Chlamydophila pneumoniae
LPCoLN]
Length = 339
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 61/132 (46%), Gaps = 34/132 (25%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRL------------------------ 182
E E+ +LKE+++ D+ A+ + LG+I L++GR+
Sbjct: 24 EYEQAEKRLKETLELDSTAALAYCYLGIIALETGRVPEALNWCSKGLASEPGDSYLRYCY 83
Query: 183 ----------QSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
+++I S+ +A+ P++ +C +LG Y + ++++ CF ++ D
Sbjct: 84 GVALDRGNQYEAAIEQYSAYVALHPDDVECWFSLGSVYHRLKRLQEALDCFDKILALDPW 143
Query: 233 HPAALINYAALL 244
+P +L N A +L
Sbjct: 144 NPQSLYNKAVIL 155
>gi|262198282|ref|YP_003269491.1| hypothetical protein [Haliangium ochraceum DSM 14365]
gi|262081629|gb|ACY17598.1| TPR repeat-containing protein [Haliangium ochraceum DSM 14365]
Length = 288
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 49/251 (19%), Positives = 99/251 (39%), Gaps = 37/251 (14%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
+S ++++ ++ + A+ W +LG + + ++ A+ +N NLG+AY+
Sbjct: 55 ISAFQQAVAANPKHAMAWASLGHLYKDKRDYKKAVDAYERATAISDDNALLWSNLGMAYY 114
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 271
++ ++ + + + D A N G Q +
Sbjct: 115 RAKRVDDAQRALERSFQLDSK---------------------SADVNANLGTLYRQRGDI 153
Query: 272 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 331
A L A+K DPK+A +NLA AY + + + L +A +L+ S ++ + V
Sbjct: 154 EKALRHLRFAVKLDPKSAVYHSNLAIAYRSNKQYDEAEQELRQAIRLDAKEPSYQFNLGV 213
Query: 332 SRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPI--AWAGFAAVQKTHHEVAAAF 389
R QE ++ +A+ R V+++P AW + + +H+ A
Sbjct: 214 -----VYRYQEKVDE------AIAAYTR---AVRLDPGYHKAWYDLGHMHRLNHDNDKAI 259
Query: 390 ETEENELSKME 400
E L +E
Sbjct: 260 EAFSRYLELIE 270
>gi|134293931|ref|YP_001117667.1| hypothetical protein Bcep1808_5253 [Burkholderia vietnamiensis G4]
gi|134137088|gb|ABO58202.1| TPR repeat-containing protein [Burkholderia vietnamiensis G4]
Length = 1189
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 178 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL 237
+ G LQ + ++LLA DP++ + + LG+ FQ G ++ + + I + Q P AL
Sbjct: 481 RDGALQQAEHAYAALLAADPDHPEALHLLGVLRFQQGRLDDAEPLMRRSIER-QPAPLAL 539
Query: 238 INYAALLLCKYGSVLAGAGANTGEGACLDQASAVN 272
NY+A VLAG G A LD A A+N
Sbjct: 540 ANYSA--------VLAGLGRTHDALARLDDALAIN 566
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 68/178 (38%), Gaps = 17/178 (9%)
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
GL L + GR + + LA+ P + D + G+ + D E++ F I
Sbjct: 645 GLALRELGRHRDAADSYDHALALAPGSADVLFLRGVVHLDLHDPERALTDFNAAIATKPT 704
Query: 233 HPAALINYA-----------ALLLCKYGSVL----AGAGANTGEGACLDQASAVNVAKEC 277
AL+N A ALL C L A A A G A Q A +
Sbjct: 705 FVDALVNSAIALEQLGRHDEALLRCDRALALEPRHACALATRGNAAS--QLGRHTDAIDS 762
Query: 278 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 335
AL ADP + + N A+A H + E+A +L+P C + A R++
Sbjct: 763 YARALDADPLSTVVLCNFADALMRVDRHADAHALCERALELDPQCAPAWFTRARVRLE 820
>gi|386391181|ref|ZP_10075962.1| cytochrome c biogenesis factor [Desulfovibrio sp. U5L]
gi|385732059|gb|EIG52257.1| cytochrome c biogenesis factor [Desulfovibrio sp. U5L]
Length = 206
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 41/90 (45%)
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
L++ Q + A W LG + + + +I+ L +DP D + + G+ Y Q G
Sbjct: 74 LEKQTQLEPANAAAWTELGNLYFDTEQPDKAITAYEKALTLDPKQPDVLTDQGVMYRQVG 133
Query: 215 DMEQSAKCFQDLILKDQNHPAALINYAALL 244
+++ +CF I + H A N + +L
Sbjct: 134 KFDKALECFNKAIAINPGHIIAQFNKSVVL 163
>gi|347538703|ref|YP_004846127.1| TPR domain/sulfotransferase domain containing protein
[Pseudogulbenkiania sp. NH8B]
gi|345641880|dbj|BAK75713.1| TPR domain/sulfotransferase domain protein [Pseudogulbenkiania sp.
NH8B]
Length = 700
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 169 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
WN LG++L ++G+L+ S L ++A++P + NLG + + G M+ + C++ +
Sbjct: 117 WNNLGIVLQEAGKLEQSRVCLERVVALNPEWPEAQNNLGNTWRRLGQMDHAEACYRQALA 176
Query: 229 KDQNHPAALINYAALL 244
+ ++ A N A LL
Sbjct: 177 LNPSYAEAHSNLAFLL 192
>gi|125973545|ref|YP_001037455.1| TPR repeat-containing protein [Clostridium thermocellum ATCC 27405]
gi|256003363|ref|ZP_05428354.1| Tetratricopeptide TPR_2 repeat protein [Clostridium thermocellum
DSM 2360]
gi|281417749|ref|ZP_06248769.1| Tetratricopeptide TPR_2 repeat protein [Clostridium thermocellum
JW20]
gi|385778534|ref|YP_005687699.1| hypothetical protein Clo1313_1184 [Clostridium thermocellum DSM
1313]
gi|419723637|ref|ZP_14250752.1| Tetratricopeptide TPR_2 repeat-containing protein [Clostridium
thermocellum AD2]
gi|419724538|ref|ZP_14251600.1| Tetratricopeptide TPR_2 repeat-containing protein [Clostridium
thermocellum YS]
gi|125713770|gb|ABN52262.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
thermocellum ATCC 27405]
gi|255992653|gb|EEU02744.1| Tetratricopeptide TPR_2 repeat protein [Clostridium thermocellum
DSM 2360]
gi|281409151|gb|EFB39409.1| Tetratricopeptide TPR_2 repeat protein [Clostridium thermocellum
JW20]
gi|316940214|gb|ADU74248.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
thermocellum DSM 1313]
gi|380772085|gb|EIC05943.1| Tetratricopeptide TPR_2 repeat-containing protein [Clostridium
thermocellum YS]
gi|380780319|gb|EIC10002.1| Tetratricopeptide TPR_2 repeat-containing protein [Clostridium
thermocellum AD2]
Length = 274
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 50/91 (54%)
Query: 154 KLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQS 213
K+ E + S+ + ++ +LG +L+ G + +++ + ++ + NLG Y++
Sbjct: 136 KMLEDVFSNYKNTTIYGSLGYLLILDGDMNKALNFNKEAYEYNSSDPVILDNLGYTYYKI 195
Query: 214 GDMEQSAKCFQDLILKDQNHPAALINYAALL 244
G+++++ + ++ LI + N P A NY+ +L
Sbjct: 196 GNIKKAEEIYRKLIGLNPNFPEAYYNYSCVL 226
>gi|383791910|ref|YP_005476484.1| hypothetical protein [Spirochaeta africana DSM 8902]
gi|383108444|gb|AFG38777.1| tetratricopeptide repeat protein [Spirochaeta africana DSM 8902]
Length = 451
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 72/179 (40%), Gaps = 26/179 (14%)
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
+PE EE+LS + +Q Q +L LI G S +L +A DP D
Sbjct: 78 QPEAAEELLSSV---LQEAPEQPQALYSLALIQNSRGDRARSRELLEQAVAADPEYADAH 134
Query: 204 GNLGIAYFQSGDMEQSAKCFQDLI-LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 262
LG +S + + FQ + L +QN A G G
Sbjct: 135 AALGEILLESRSPRGARRAFQTAVELDEQNF----------------------VARVGLG 172
Query: 263 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
L Q A++ L A++ +P+ WA+ A A TG++R + L +A +L+P+
Sbjct: 173 NALLQLQEYESAEQELTEAVELEPEYPFGWADRARARIGTGNNRGAIDDLTQAIQLQPD 231
>gi|448097087|ref|XP_004198585.1| Piso0_001965 [Millerozyma farinosa CBS 7064]
gi|359380007|emb|CCE82248.1| Piso0_001965 [Millerozyma farinosa CBS 7064]
Length = 720
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 72/185 (38%), Gaps = 38/185 (20%)
Query: 168 VWNTLGLILLKSGRLQSSISVLSSLLAVDPN---NCDCIGNLGIAYFQSGDMEQSAKCFQ 224
+W+ +G++ + G L+ + +L +DPN + + LGI Y G ++ + +CFQ
Sbjct: 152 LWHGIGILYDRYGSLEYAEEAFVRVLELDPNFDKSNEIYFRLGIIYKHQGKLKSALECFQ 211
Query: 225 DLILKDQNHP---------------------AALINYAALLL-------------CKYGS 250
IL + HP +A Y +L C Y
Sbjct: 212 -YILNNPPHPLTQPDVWFQIGSVLEQQKDWNSAKEAYEKVLQVNPQHAKVLQQLGCLYSQ 270
Query: 251 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGK 310
T G +N+A + LL +L+ D AH W L + + GD+ ++ +
Sbjct: 271 AEPVVSPVTQNGQQQPFKQDLNIALKYLLQSLEIDQSDAHSWYYLGRVHMMRGDYNAAYE 330
Query: 311 CLEKA 315
++A
Sbjct: 331 AFQQA 335
>gi|320352459|ref|YP_004193798.1| hypothetical protein Despr_0323 [Desulfobulbus propionicus DSM
2032]
gi|320120961|gb|ADW16507.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfobulbus
propionicus DSM 2032]
Length = 758
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 70 KMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIAR--PELLSLVQIHHAQ 127
K+P N LGL Y + Q KA ++EK LL + D A+ LL L Q AQ
Sbjct: 469 KVPDNVEVLGSLGLTYLAMKQEAKAKQTFEK----LLAVQPDNAKAFSFLLQLAQKSGAQ 524
Query: 128 --CLL----------PESSGDNSLDKEL-----EPEELEEILSKLKESMQSDTRQAVVWN 170
L+ P+S+G L L +P++ E+ SK +E + D Q +
Sbjct: 525 KEALIKMTQAQIDKAPKSAGLQILLANLFLSAQQPDKALELYSKAQE-LDPDNPQPYAMS 583
Query: 171 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD-LILK 229
LIL + G+ +I+ LLA PN LG Y Q+G + + + +Q L +K
Sbjct: 584 --ALILTRQGKTDQAIAEYRDLLAKQPNAIGAYMGLGSIYEQTGKTDLAKEAYQKALAVK 641
Query: 230 DQNHPAA 236
PAA
Sbjct: 642 PDFAPAA 648
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 15/188 (7%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E + +L+ ++Q D + A LGL+ LKSG ++ + + L +DP N D
Sbjct: 49 KEAIIELRNAIQIDPKYADARYQLGLLYLKSGDVRQAFAELQRAATLDPKNLDAKIKTAE 108
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLC--KYGSVLAG-----AGANTGE 261
Y + E + K +++++ ++ AL A L L K+ + +A AGA +
Sbjct: 109 FYLLTKKKEDAQKHIDEVLVQAPDNKDALALQANLELVDGKFDAAIATVDKAIAGAPNED 168
Query: 262 ------GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC-LEK 314
G L A+ L AL+ D K A LA A+Y+ S K LEK
Sbjct: 169 RFYAIKGRALSAKQQFPAAENAFLKALELDGKKLANHATLA-AFYVERKELSKAKASLEK 227
Query: 315 AAKLEPNC 322
A P+
Sbjct: 228 MAAAFPDS 235
>gi|218886153|ref|YP_002435474.1| hypothetical protein DvMF_1051 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218757107|gb|ACL08006.1| TPR repeat-containing protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 215
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/114 (21%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Query: 131 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
P N ++ P+ + IL ++++++ D W LG + + + + +I
Sbjct: 59 PSQQSQNGPANQISPDVMGRIL-EMEQAVLKDPNDVAAWTKLGHLYFDTDQPKKAIPAYE 117
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
LA+ PN+ D + +LG+ Y + +++ F+ I + H A N +L
Sbjct: 118 KSLALKPNDPDVLTDLGVMYREDHQHDRALATFEKAIAANPKHQIARFNKGIVL 171
>gi|387905576|ref|YP_006335914.1| TPR repeat containing protein [Burkholderia sp. KJ006]
gi|387580468|gb|AFJ89183.1| TPR repeat containing protein [Burkholderia sp. KJ006]
Length = 1213
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 178 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL 237
+ G LQ + ++LLA DP++ + + LG+ FQ G ++ + + I + Q P AL
Sbjct: 505 RDGALQQAEHAYAALLAADPDHPEALHLLGVLRFQQGRLDDAEPLMRRSIER-QPAPLAL 563
Query: 238 INYAALLLCKYGSVLAGAGANTGEGACLDQASAVN 272
NY+A VLAG G A LD A A+N
Sbjct: 564 ANYSA--------VLAGLGRTHDALARLDDALAIN 590
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 69/181 (38%), Gaps = 17/181 (9%)
Query: 170 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 229
T GL L + GR + + LA+ P + D + G+ + D E++ F I
Sbjct: 666 RTRGLALRELGRHRDAADSYDHALALAPGSADVLFLRGVVHLDLHDPERALTDFNAAIAT 725
Query: 230 DQNHPAALINYA-----------ALLLCKYGSVL----AGAGANTGEGACLDQASAVNVA 274
ALIN A ALL C L A A A G A Q A
Sbjct: 726 KPTFVDALINSAIALEQLGRHDEALLRCDRALALEPRHACALATRGNAAS--QLGRHTDA 783
Query: 275 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRI 334
+ AL ADP + + N A+A H + E+A +L+P C + A R+
Sbjct: 784 IDSYARALDADPLSTVVLCNFADALMRVDRHADAHALCERALELDPQCAPAWFTRARVRL 843
Query: 335 K 335
+
Sbjct: 844 E 844
>gi|330508203|ref|YP_004384631.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
gi|328929011|gb|AEB68813.1| TPR-repeat protein [Methanosaeta concilii GP6]
Length = 722
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 92/250 (36%), Gaps = 23/250 (9%)
Query: 89 GQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNS-----LDKEL 143
G PL + + K E I E L+ VQ C+ +S + + DK
Sbjct: 132 GSPLSQIDALAKNEPITDMLEHSDDDSSLIDEVQNKQPNCIENNTSFELTSKTIWRDKGN 191
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
E LEEI S++++ + A W G+ L K G+ +++ + ++P +
Sbjct: 192 AIENLEEI----NRSIETNAQDADAWRNKGIALHKQGKFNEAVAAYEKAIQINPLDSSSW 247
Query: 204 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL---CKYGSVLAG------ 254
G G +Q+ + + I + + N L KY +
Sbjct: 248 SGKGAVLDDLGQYDQAIRAYDQAIEINPQDADSFANKGLNLYHYQAKYDEAIVALDMAIK 307
Query: 255 -----AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 309
AGA +G L A E A++ DP A IW N A+ G++ +
Sbjct: 308 INPQLAGAWNIKGGILTGRGKYGEAIEAYDKAIELDPLNASIWNNRGAAFVGEGNYDEAV 367
Query: 310 KCLEKAAKLE 319
+ +A +++
Sbjct: 368 RAFNRAIEID 377
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 62/152 (40%), Gaps = 22/152 (14%)
Query: 82 GLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDK 141
G + LGQ +A+ +Y++A EI + A L ++H Q
Sbjct: 251 GAVLDDLGQYDQAIRAYDQAIEINPQDADSFANKGL----NLYHYQA------------- 293
Query: 142 ELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCD 201
+ +E + L +++ + + A WN G IL G+ +I + +DP N
Sbjct: 294 -----KYDEAIVALDMAIKINPQLAGAWNIKGGILTGRGKYGEAIEAYDKAIELDPLNAS 348
Query: 202 CIGNLGIAYFQSGDMEQSAKCFQDLILKDQNH 233
N G A+ G+ +++ + F I DQ +
Sbjct: 349 IWNNRGAAFVGEGNYDEAVRAFNRAIEIDQQN 380
>gi|225850059|ref|YP_002730293.1| hypothetical protein PERMA_0503 [Persephonella marina EX-H1]
gi|225646356|gb|ACO04542.1| tetratricopeptide repeat domain protein [Persephonella marina
EX-H1]
Length = 559
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 76/185 (41%), Gaps = 13/185 (7%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
EE + LK++++ + + LG + L+ + + + V +L DPN+ + + L
Sbjct: 181 EEAIKHLKKALEIEPLYQPAYVLLGELYLQDRKFKEAEKVYLKVLEKDPNDLEALNRLFQ 240
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK-YGSVLAGAGANTGE------ 261
Y Q+ +++ + ++ D ++ AL+ L L + G + +
Sbjct: 241 VYVQADQFKKAEEIINRIVKIDPSNKDALLKKFLLYLRENKGEEIIRELEELAKEEPDNP 300
Query: 262 ------GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 315
G + A A+E L LK +P+ + I LA Y TG + + L +
Sbjct: 301 TVLSILGMAYESAQRYKKAEEIYLKVLKLEPENSEILERLAEVYTRTGQYEKALDVLNRL 360
Query: 316 AKLEP 320
L+P
Sbjct: 361 YSLDP 365
>gi|441497885|ref|ZP_20980093.1| TPR repeat containing protein [Fulvivirga imtechensis AK7]
gi|441438451|gb|ELR71787.1| TPR repeat containing protein [Fulvivirga imtechensis AK7]
Length = 467
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 68/187 (36%), Gaps = 13/187 (6%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
ELE +S K+ + +D W LG++ K GR +I + ++ N N+
Sbjct: 182 ELESSISYYKKFIDADPYSQAAWYNLGIVYNKLGRFDEAIHAYDYAIVIEENFSSAYFNM 241
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL--------LLCKYGSVLAGAG-- 256
G Y Q Q+ ++ I + P A + L KY
Sbjct: 242 GNTYAQMEKYPQALDAYKKTIDIEGPSPEVYCQMATVYEKMEQYELGLKYFQKATKLDNL 301
Query: 257 ---ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
A G G CL++ + ALK D + W +A Y G+ SS E
Sbjct: 302 YDEAWFGAGKCLNKQQKWYQSLHFYNKALKLDHENPEYWKAVAQTEYQIGNIVSSIDAYE 361
Query: 314 KAAKLEP 320
+A+ L P
Sbjct: 362 EASMLTP 368
>gi|440681617|ref|YP_007156412.1| Tetratricopeptide TPR_2 repeat-containing protein [Anabaena
cylindrica PCC 7122]
gi|428678736|gb|AFZ57502.1| Tetratricopeptide TPR_2 repeat-containing protein [Anabaena
cylindrica PCC 7122]
Length = 365
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 84/207 (40%), Gaps = 13/207 (6%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
+++ ++ ++++QSD+ A LGL L ++G+LQ + DP NLG
Sbjct: 120 MQDAITAFRQAIQSDSTLAPAHYNLGLALRQAGQLQPAADAFYQATQADPQFAPAFANLG 179
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL--LLCKYGSVLAG------AGANT 259
A + +++ +A Q + D A N + L + S +A N+
Sbjct: 180 GALLEGNNLQLAADYLQRSLQIDPQLGFAHYNLGLVKELQKDWESAIASFKKAMTYSQNS 239
Query: 260 GE-----GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 314
E G Q V +AKE A+ +P+ A NL + ++ G + K
Sbjct: 240 PEPAYHLGMSYLQQGKVQLAKEAFSKAIAINPRYAEAHYNLGSIWFNQGKFNEALAAFRK 299
Query: 315 AAKLEPNCMSTRYAVAVSRIKDAERSQ 341
+A++ N Y + I+ + S+
Sbjct: 300 SAEVNANYADAYYGAGLVFIQLKQYSE 326
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 73/185 (39%), Gaps = 22/185 (11%)
Query: 155 LKESMQSDTRQAVV-WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQS 213
++ + TRQA + W GL ++ G +Q +I+ + D NLG+A Q+
Sbjct: 92 VRSFLAQTTRQAALDWLNQGLQAIQGGNMQDAITAFRQAIQSDSTLAPAHYNLGLALRQA 151
Query: 214 GDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNV 273
G ++ +A F D A A AN G GA L+ + + +
Sbjct: 152 GQLQPAADAFYQATQADPQ-------------------FAPAFANLG-GALLE-GNNLQL 190
Query: 274 AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSR 333
A + L +L+ DP+ NL L D S+ +KA N Y + +S
Sbjct: 191 AADYLQRSLQIDPQLGFAHYNLGLVKELQKDWESAIASFKKAMTYSQNSPEPAYHLGMSY 250
Query: 334 IKDAE 338
++ +
Sbjct: 251 LQQGK 255
>gi|344345323|ref|ZP_08776177.1| Tetratricopeptide TPR_2 repeat-containing protein [Marichromatium
purpuratum 984]
gi|343803152|gb|EGV21064.1| Tetratricopeptide TPR_2 repeat-containing protein [Marichromatium
purpuratum 984]
Length = 544
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 72/172 (41%), Gaps = 21/172 (12%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E L+ L+ ++ + R + N + LL+ GR + ++ L V P++ + NLG+A
Sbjct: 110 EALTVLEGALALEPRDPEILNAIATALLRLGRGEDALGYYRRTLEVAPDHAEAHYNLGLA 169
Query: 210 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 269
+ G ++++ KC+ D P A N G +Q
Sbjct: 170 LHEFGRLDEALKCYVRANAIDPELPQACNN---------------------AGNVCNQLG 208
Query: 270 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
+ A + AL DP+ A + NLA+A ++ + LE+A L P+
Sbjct: 209 RLQQAIDWFSRALAQDPRNADVLNNLASAQIRACLFEAALRTLERALALVPD 260
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 108/284 (38%), Gaps = 56/284 (19%)
Query: 63 GLVHVARKM----PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL 118
G H AR++ P++ A LGL+ R +A++ E A + R PE+L
Sbjct: 76 GAEHEARRLVASHPRDVFARKALGLILLRRRHHAEALTVLEGALALEPR------DPEIL 129
Query: 119 SLVQIHHAQCLLPESSGDNSLDK-----ELEPEELE---------EILSKLKESMQSDTR 164
+ + A LL G+++L E+ P+ E +L E+++ R
Sbjct: 130 NAI----ATALLRLGRGEDALGYYRRTLEVAPDHAEAHYNLGLALHEFGRLDEALKCYVR 185
Query: 165 QAVV-------WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDME 217
+ N G + + GRLQ +I S LA DP N D + NL A ++ E
Sbjct: 186 ANAIDPELPQACNNAGNVCNQLGRLQQAIDWFSRALAQDPRNADVLNNLASAQIRACLFE 245
Query: 218 QSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKEC 277
+ + + + +H AL N G L + + A++
Sbjct: 246 AALRTLERALALVPDHAEALNN---------------------RGNALVELGRLEAAQQS 284
Query: 278 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
L AL+ P A + NL N L + +A L+P+
Sbjct: 285 YLDALRVRPDYADAYCNLGNVLDLLCKPLQAIDSYRRALALKPD 328
>gi|432879797|ref|XP_004073552.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
[Oryzias latipes]
Length = 1016
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 84/408 (20%), Positives = 156/408 (38%), Gaps = 78/408 (19%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 128
++ P A A+ LG +Y+ GQ +A+ Y A + +P+ +
Sbjct: 73 KQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHALRL---------KPDFIXXXXXXXXXD 123
Query: 129 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 188
L S +L K L LEE + +++++ AV W+ LG + G + +I
Sbjct: 124 LYCVRSDLGNLLKALG--RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHH 181
Query: 189 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 248
+ +DPN D AY G++ + A+ F A+ Y L
Sbjct: 182 FEKAVTLDPNFLD-------AYINLGNVLKEARIFD----------RAVAGYLRAL---- 220
Query: 249 GSVLAGAGANTGEGACL-DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRS 307
S+ G AC+ + +++A + A++ P + NLANA G+
Sbjct: 221 -SLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSE 279
Query: 308 SGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ--------------EPTEQLSWAGNE 353
+ +C A +L P +A +++ + + +R Q E + + A +
Sbjct: 280 AEECYNTALRLCPT-----HADSLNNLANIKREQGNIEEAVQLYRKALEVFPEFAAAHSN 334
Query: 354 MASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQ 413
+AS+L++ +Q A + + A A+ N L +M++ G
Sbjct: 335 LASVLQQQGKLQ----EALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG--------- 381
Query: 414 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKV 461
A +C A++ +P A +NLA+ H+ SG E +
Sbjct: 382 ------ALQCYTRAIQINPAFADAHSNLASI------HKDSGNIPEAI 417
>gi|350561806|ref|ZP_08930644.1| Tetratricopeptide TPR_1 repeat-containing protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349780838|gb|EGZ35156.1| Tetratricopeptide TPR_1 repeat-containing protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 765
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%)
Query: 160 QSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 216
+ D + V N LGL+L SGR Q + L S +A D N GNL +AY + G +
Sbjct: 204 RGDVARGAVLNNLGLLLRDSGRRQEAAGALRSAVAADSGNWRARGNLALAYLEQGRI 260
>gi|218247925|ref|YP_002373296.1| hypothetical protein PCC8801_3161 [Cyanothece sp. PCC 8801]
gi|257060752|ref|YP_003138640.1| hypothetical protein Cyan8802_2957 [Cyanothece sp. PCC 8802]
gi|218168403|gb|ACK67140.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
gi|256590918|gb|ACV01805.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802]
Length = 297
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 79/196 (40%), Gaps = 18/196 (9%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
++ E LS+ K + Q Q W LG + ++ L + L L++ P+
Sbjct: 67 QQYELALSRAKLATQLAPNQFQSWFILGTLYIQQKELDKGVEALQKALSLAPSEAGIKFT 126
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY--AALLLCKYGSVLAGA-------- 255
LG AYFQ G +++A QD + + PAAL + + L L K +A
Sbjct: 127 LGNAYFQQGKYQEAATELQDGLKIKPDTPAALFDLGNSYLKLNKMSDAIASYQKAIALEK 186
Query: 256 ---GANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 312
A G + +N A + AL+ DP+ A +A Y+ G K
Sbjct: 187 NFWPAINNIGLIKYEQGDINGAVKDWQTALEIDPEQAEPQLAVAVGLYIQGKTEQGLKLG 246
Query: 313 EKAAKLEPNCMSTRYA 328
E A KL+ +RYA
Sbjct: 247 EAALKLD-----SRYA 257
>gi|15618603|ref|NP_224889.1| hypothetical protein CPn0693 [Chlamydophila pneumoniae CWL029]
gi|15836225|ref|NP_300749.1| hypothetical protein CPj0693 [Chlamydophila pneumoniae J138]
gi|16752347|ref|NP_444605.1| type III secretion chaperone [Chlamydophila pneumoniae AR39]
gi|33242051|ref|NP_876992.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
[Chlamydophila pneumoniae TW-183]
gi|4376995|gb|AAD18832.1| TPR Repeats-CT683 hypothetical protein [Chlamydophila pneumoniae
CWL029]
gi|8163354|gb|AAF73621.1| type III secretion chaperone, putative [Chlamydophila pneumoniae
AR39]
gi|8979065|dbj|BAA98900.1| TPR repeats-CT683 hypothetical protein [Chlamydophila pneumoniae
J138]
gi|33236561|gb|AAP98649.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
[Chlamydophila pneumoniae TW-183]
Length = 339
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 61/132 (46%), Gaps = 34/132 (25%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRL------------------------ 182
E E+ +LKE+++ D+ A+ + LG+I L++GR+
Sbjct: 24 EYEQAEKRLKETLELDSTAALAYCYLGIIALETGRVSEALNWCSKGLASEPGDSYLRYCY 83
Query: 183 ----------QSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
+++I S+ +A+ P++ +C +LG Y + ++++ CF ++ D
Sbjct: 84 GVALDRGNQYEAAIEQYSAYVALHPDDVECWFSLGSVYHRLKRLQEALDCFDKILALDPW 143
Query: 233 HPAALINYAALL 244
+P +L N A +L
Sbjct: 144 NPQSLYNKAVIL 155
>gi|209524105|ref|ZP_03272656.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
gi|209495480|gb|EDZ95784.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
Length = 1676
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 112/270 (41%), Gaps = 26/270 (9%)
Query: 80 LLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIAR---PELLSLVQIHHAQCLLPESSGD 136
LLG ++Q+ G + Y++A+ + R E+ + R P+ S Q PE
Sbjct: 853 LLGKVWQQRGDEYWSRYWYQRAQALGYR-ESVVERKDPPQPESPTQGKPEIPQAPEEPPS 911
Query: 137 N---SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLL 193
+ ++ L+ ++ ++ LS ++++ D A ++ LG LL RL +++ +
Sbjct: 912 DMVAQVEANLQEKQFQQALSLCQQALALDPEAANIYPLLGKALLGLKRLSEAVAAFEKAV 971
Query: 194 AVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL---------- 243
++P + NLG Y Q EQ+ KC++ I N AA N +
Sbjct: 972 QLNPADATIHTNLGSLYAQMQRWEQAVKCYERAIALQPNLVAAHRNLGKVWQKLGQPQQA 1031
Query: 244 LLCKYGSVLAGAGANTGE-------GACLDQASAVNVAKECLLAALKADPKAAHIWANLA 296
L C+Y +++ + GE G L Q + A+ C ++ P + + NL
Sbjct: 1032 LSCRYQALI--LQPDQGEASEFLAVGNSLLQGGRLQEAEVCYRQVVRRSPHDSQAYHNLG 1089
Query: 297 NAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
G + +A +L+P+ +R
Sbjct: 1090 EVLSAQGLWSQAEAAYRRAVELQPDSFESR 1119
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 76/199 (38%), Gaps = 29/199 (14%)
Query: 171 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 230
LG +L K G ++ +I+ + PN + NLG+ QSG ++ +Q I +
Sbjct: 54 NLGFVLEKLGDVEDAIACYRQAIIHKPNYTNAYYNLGLILQQSGREIEAIAAYQSAIYLE 113
Query: 231 QNHPAALINYAALLLCK--YGSVLAGAGA-------------NTGEGACLDQASAVNVAK 275
P N +L+ + Y + L GA N G Q +A
Sbjct: 114 PETPMPYSNLGGILVGRGEYQTALEILGAALKKWPQTASLHNNLGRSLLGKQDGDRAIA- 172
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR--------- 326
L A++ P +A I NL A G H ++ +C +K L P
Sbjct: 173 -AFLKAVQLQPDSAIIQHNLGKALQQQGSHIAALECFQKVLSLAPEFPGIHSDLAWSLME 231
Query: 327 ---YAVAVSRIKDAERSQE 342
+ A++ +K+A + QE
Sbjct: 232 LADFPEAIAHLKEAIKGQE 250
>gi|376004134|ref|ZP_09781892.1| putative tetratricopeptide repeats containing glycosyl transferase,
N-acetylglucosaminyl-transferase P110 family [Arthrospira
sp. PCC 8005]
gi|375327468|emb|CCE17645.1| putative tetratricopeptide repeats containing glycosyl transferase,
N-acetylglucosaminyl-transferase P110 family [Arthrospira
sp. PCC 8005]
Length = 1679
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 112/270 (41%), Gaps = 26/270 (9%)
Query: 80 LLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIAR---PELLSLVQIHHAQCLLPESSGD 136
LLG ++Q+ G + Y++A+ + R E+ + R P+ S Q PE
Sbjct: 853 LLGKVWQQRGDEYWSRYWYQRAQALGYR-ESVVERKDPPQPESPTQGKPEIPQAPEEPPS 911
Query: 137 N---SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLL 193
+ ++ L+ ++ ++ LS ++++ D A ++ LG LL RL +++ +
Sbjct: 912 DMVAQVEANLQEKQFQQALSLCQQALALDPEAANIYPLLGKALLGLKRLSEAVAAFEKAV 971
Query: 194 AVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL---------- 243
++P + NLG Y Q EQ+ KC++ I N AA N +
Sbjct: 972 QLNPADATIHTNLGSLYAQMQRWEQAVKCYERAIALQPNLVAAHRNLGKVWQKLGQPQQA 1031
Query: 244 LLCKYGSVLAGAGANTGE-------GACLDQASAVNVAKECLLAALKADPKAAHIWANLA 296
L C+Y +++ + GE G L Q + A+ C ++ P + + NL
Sbjct: 1032 LSCRYQALI--LQPDQGEVSEFLAVGNSLLQGGRLQEAEVCYRQVVRRSPHDSQAYHNLG 1089
Query: 297 NAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
G + +A +L+P+ +R
Sbjct: 1090 EVLSAQGLWSQAEAAYRRAVELQPDSFESR 1119
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 76/199 (38%), Gaps = 29/199 (14%)
Query: 171 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 230
LG +L K G ++ +I+ + PN + NLG+ QSG ++ +Q I +
Sbjct: 54 NLGFVLEKLGDVEDAIACYRQAIIHKPNYTNAYYNLGLILQQSGREIEAIAAYQSAIYLE 113
Query: 231 QNHPAALINYAALLLCK--YGSVLAGAGA-------------NTGEGACLDQASAVNVAK 275
P N +L+ + Y + L GA N G Q +A
Sbjct: 114 PETPMPYSNLGGILVGRGEYQTALEILGAALKKWPQTASLHNNLGRSLLGKQDGDRAIA- 172
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR--------- 326
L A++ P +A I NL A G H ++ +C +K L P
Sbjct: 173 -AFLKAVQLQPDSAIIQHNLGKALQQQGSHIAALECFQKVLSLAPEFPGIHSDLAWSLME 231
Query: 327 ---YAVAVSRIKDAERSQE 342
+ A++ +K+A + QE
Sbjct: 232 LADFPEAIAHLKEAIKGQE 250
>gi|206890955|ref|YP_002249256.1| TPR domain protein, [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742893|gb|ACI21950.1| TPR domain protein, putative [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 542
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 95/223 (42%), Gaps = 15/223 (6%)
Query: 140 DKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNN 199
D L+ +ELE + + + ++ DT L + +K +++ +I V +L PN
Sbjct: 54 DTYLKIDELETAKNYITDVLKEDTENIDALQVLASVYVKEKKVKEAIEVYEKILQQSPNK 113
Query: 200 CDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK---------YGS 250
+ + +G Y SG +++ + F+ ++ +D + AL + + K + +
Sbjct: 114 IEMLSKIGNLYLISGMYDKAIETFKKILKEDSENIMALHFLGIIYIEKKDFKSARESFKT 173
Query: 251 VLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHR 306
+L A T GA + A + A+ AL+ +P+ L N Y ++
Sbjct: 174 ILKLNPDYEPAYTNLGAVEELAGNLKDAELYFKKALELNPENLFARERLINLYLSQKSYK 233
Query: 307 SSGKCLE--KAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQL 347
+ K LE K K E + + A+ +IK +++ E E L
Sbjct: 234 EAIKELETLKEQKSESEQIHEKLALLYLQIKQYDKATEELEYL 276
>gi|423066047|ref|ZP_17054837.1| tetratricopeptide TPR_2 repeat protein [Arthrospira platensis C1]
gi|406712546|gb|EKD07731.1| tetratricopeptide TPR_2 repeat protein [Arthrospira platensis C1]
Length = 985
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 110/269 (40%), Gaps = 24/269 (8%)
Query: 80 LLGLMYQRLGQPLKAVSSYEKAEEILLRCEA----DIARPELLSLVQIHHAQCLL-PESS 134
LLG ++Q+ G + Y++A+ + R D +PE S + Q P S
Sbjct: 308 LLGKVWQQRGDEYWSRYWYQRAQALGYRESVVERKDPPQPESPSQGKPEIPQAPEEPPSD 367
Query: 135 GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLA 194
++ L+ ++ ++ LS ++++ D A ++ LG LL RL +++ +
Sbjct: 368 MVAQVEANLQEKQFQQALSLCQQALALDPEAANIYPLLGKALLGLKRLSEAVAAFEKAVQ 427
Query: 195 VDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL----------L 244
++P + NLG Y Q EQ+ KC++ I N AA N + L
Sbjct: 428 LNPADATIHTNLGSLYAQMQRWEQAVKCYERAIALQPNLVAAHRNLGKVWQKLGQPQQAL 487
Query: 245 LCKYGSVLAGAGANTGE-------GACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 297
C+Y +++ + GE G L Q + A+ C ++ P + + NL
Sbjct: 488 SCRYQALI--LQPDQGEASEFLAVGNSLLQGGRLQEAEVCYRQVVRRSPHDSQAYHNLGE 545
Query: 298 AYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
G + +A +L+P+ +R
Sbjct: 546 VLSAQGLWSQAEAAYRRAVELQPDSFESR 574
>gi|407698709|ref|YP_006823496.1| sulfotransferase [Alteromonas macleodii str. 'Black Sea 11']
gi|407247856|gb|AFT77041.1| sulfotransferase [Alteromonas macleodii str. 'Black Sea 11']
Length = 522
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 108/252 (42%), Gaps = 44/252 (17%)
Query: 65 VHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIH 124
V V ++ +AHA+FLLG+++ +GQ KA++ K+ EI E S+ +
Sbjct: 28 VEVIQQFGPHAHAYFLLGIIHIEIGQIEKAIALLTKSNEI-----------ENRSITSAY 76
Query: 125 HAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQS 184
A+C + +LD + ++S +R A+ +T+G+ L + G +
Sbjct: 77 LAKCFALKGDMQQALD------------CVARAPVESLSR-ALDLDTVGVSLSRIGLHED 123
Query: 185 SISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
+I+ LA+ P N N ++ +G E + K F+ I + N A + AL
Sbjct: 124 AIAYFEKALALAPANPQYHYNYAVSCKFAGKFELARKHFEQAIDSEPNFFQA---HFAL- 179
Query: 245 LCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAA-HIWANLANAYYLTG 303
S L G + A L E L+ +KA+P A HI LA Y G
Sbjct: 180 -----SDLGGISPDNNHLARL----------EPLVEKVKANPDARLHIGHALAKEYEALG 224
Query: 304 DHRSSGKCLEKA 315
D+ + + L+ A
Sbjct: 225 DYTRAFESLQHA 236
>gi|344267805|ref|XP_003405756.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like
[Loxodonta africana]
Length = 882
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 88/427 (20%), Positives = 166/427 (38%), Gaps = 68/427 (15%)
Query: 68 ARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLR---------------CEADI 112
+ +P NA H+ + G+ +A+ Y A ++ R EA +
Sbjct: 476 VQTLPHNAKVHYNYANFLKDQGRNREAIYHYRTALKLYPRHASALNNLGTLTRDTAEAKM 535
Query: 113 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 172
L L HH + L + N L + E+ EE + LK S++ A +++L
Sbjct: 536 YYQRALQL-NPHHNRALF---NLGNLLKSQ---EKKEEAIILLKNSIKYGPEFADAYSSL 588
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
+L + R + + + + + P++ D N G+ +G E++ +Q I +
Sbjct: 589 ASLLAEQERYKEAEEIYQAGIKNCPDSSDLHNNYGVFLVDTGSPEKAVVHYQQAIKLSPS 648
Query: 233 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 292
H A++N G + G N NVA+E AL+ K A I
Sbjct: 649 HHVAMVN--------LGRLYRSLGEN-------------NVAEEWYKRALQVARK-AEIL 686
Query: 293 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA-----VSRIKDAERSQEPTEQL 347
+ L YY T + + + +AA L+P+ R A+A + + K+AE+
Sbjct: 687 SPLGALYYNTNRYEEALQIYREAAALQPSQRELRLALAQVLAVMGQTKEAEKMTNHIVSE 746
Query: 348 SWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHE----VAAAFETEENELSKMEECA 403
+ E +L + + Q+ HH+ + A + + + + E
Sbjct: 747 ATGCLECYRLL--------------SAIYSKQERHHKALDAIDKALQLKPKDPKVISELF 792
Query: 404 GAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLM 463
+ +Q + ++ A E AA++ +P A W N+ ++ G++ S+ EK L
Sbjct: 793 FTKGNQLREQ-NLLDKAFESYKAAVELNPDQAQAWMNMGGIQHIKGNYVSARAYYEKALQ 851
Query: 464 VYCSSNL 470
+ S L
Sbjct: 852 LVPDSKL 858
>gi|195123061|ref|XP_002006028.1| GI18771 [Drosophila mojavensis]
gi|193911096|gb|EDW09963.1| GI18771 [Drosophila mojavensis]
Length = 930
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 56/138 (40%), Gaps = 21/138 (15%)
Query: 126 AQCLLPESSGDNSLDKELEPEELEEIL----------SKLKE---------SMQSDTRQA 166
A+ L P++ S + P L + ++L+E SM+SD QA
Sbjct: 578 AKALFPQAKAGVSYHARIAPNHLNVFINLANLISKNQTRLEEADHLYRQAISMRSDYVQA 637
Query: 167 VVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDL 226
+ G IL+K R + V L D N D NLG+ + + G +Q+ F
Sbjct: 638 YI--NRGDILMKLNRTAQAQEVYEQALLYDSENADIYYNLGVVFLEQGKSQQAHVYFNKA 695
Query: 227 ILKDQNHPAALINYAALL 244
I H AL+N A LL
Sbjct: 696 IELYPEHEQALLNSAILL 713
>gi|15679902|ref|NP_275211.1| hypothetical protein MTH68, partial [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 228
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 65/177 (36%), Gaps = 21/177 (11%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
EE L + +Q + + WN GL+ + GR S+ L ++P + N G+
Sbjct: 52 EEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINPKLAEAWNNKGV 111
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
+ G E++ +C++ + D N +G L++
Sbjct: 112 VLSELGRYEEALECYEKALEIDPEDDKTWNN---------------------KGLVLEEL 150
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
A EC AL+ +P+ A W S KC +KA KL P +T
Sbjct: 151 GKYKDALECFQKALEINPEFADAWKWKGIILEDLKKPEESLKCYKKALKLNPPKQNT 207
>gi|403235941|ref|ZP_10914527.1| hypothetical protein B1040_09227 [Bacillus sp. 10403023]
Length = 496
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
L++GRL ++++L ++ P NL +AYF SGD+E ++K +++ K+ +
Sbjct: 164 FLETGRLDEAVTLLKEIIREYPEFWSAYNNLALAYFYSGDVENASKILDEVLSKNPGNLH 223
Query: 236 ALINYAALLLCK 247
AL N L +
Sbjct: 224 ALCNSLVFLYYQ 235
>gi|320102705|ref|YP_004178296.1| hypothetical protein Isop_1160 [Isosphaera pallida ATCC 43644]
gi|319749987|gb|ADV61747.1| Tetratricopeptide TPR_1 repeat-containing protein [Isosphaera
pallida ATCC 43644]
Length = 652
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 67/177 (37%), Gaps = 21/177 (11%)
Query: 150 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
E+++ ++E +Q + W LG L +G L +I + A+ P++ NLG A
Sbjct: 89 EVVALMEEGLQGQPQCVEFWVALGNALQDAGLLPRAIDAFTHAHALRPDDPLIAYNLGNA 148
Query: 210 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 269
+ + G +++ C++ + + + P A N G L +
Sbjct: 149 WLRRGRHDRAEACYRASLDLNPDQPLAWCNL---------------------GTALQEQG 187
Query: 270 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
A A+ P A NL NA G H + +A +L P+ + R
Sbjct: 188 QFEAALAAFTEAIDRAPDYADARYNLGNALQELGRHVEAETAYRRALELRPDFLEAR 244
>gi|297624941|ref|YP_003706375.1| hypothetical protein [Truepera radiovictrix DSM 17093]
gi|297166121|gb|ADI15832.1| Tetratricopeptide TPR_2 repeat protein [Truepera radiovictrix DSM
17093]
Length = 558
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 80/201 (39%), Gaps = 23/201 (11%)
Query: 70 KMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARP---ELLSLVQIHHA 126
+ P + A + LGL Y GQP +A+ E A + LR + + AR E+ + +
Sbjct: 329 RAPDSGEALYNLGLSYLESGQPDRALEPLEGALMLQLRAQGEGARAAQGEVYLALAAAYE 388
Query: 127 QCLLPESSGDNS-------------------LDKELEP-EELEEILSKLKESMQSDTRQA 166
Q P + ++ L + L E L L+E + A
Sbjct: 389 QLGRPNEARRSAEAAASRLADAALRLEASAILGRSLYALGEFRGALLALREVADARPEDA 448
Query: 167 VVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDL 226
GL + G +++I+ +A+DPN + NLG AY +G E +A ++ L
Sbjct: 449 NAQLWAGLAHYQRGEFEAAIARYERAVALDPNGAEARLNLGAAYLAAGRYEDAALVYELL 508
Query: 227 ILKDQNHPAALINYAALLLCK 247
+ + P A N LL +
Sbjct: 509 TTQFREDPDAFYNLGWALLSQ 529
>gi|224145202|ref|XP_002325562.1| predicted protein [Populus trichocarpa]
gi|222862437|gb|EEE99943.1| predicted protein [Populus trichocarpa]
Length = 221
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 65/143 (45%), Gaps = 1/143 (0%)
Query: 94 AVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILS 153
V ++ ++L R E D++ EL ++ L E G L ++ P + +L
Sbjct: 56 GVGTFFVIRQVLTRRELDLSAKELQAIRSGDATATGLFEL-GAVMLRRKFYPAATKYLLQ 114
Query: 154 KLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQS 213
+++ D A V+N LG+ + G+L + + + P NLG AY +
Sbjct: 115 AIEKWDGDDQDLAQVYNALGVSYVLDGKLDKGSKQFEAAVKLQPGYVTAWNNLGDAYEKK 174
Query: 214 GDMEQSAKCFQDLILKDQNHPAA 236
D++ + K F++++L D N+ A
Sbjct: 175 KDLKSALKAFEEVLLFDPNNKVA 197
>gi|443477489|ref|ZP_21067333.1| Tetratricopeptide TPR_2 repeat-containing protein [Pseudanabaena
biceps PCC 7429]
gi|443017386|gb|ELS31839.1| Tetratricopeptide TPR_2 repeat-containing protein [Pseudanabaena
biceps PCC 7429]
Length = 528
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 77/193 (39%), Gaps = 18/193 (9%)
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
E +L+ L+ ++++ + + LG+ L + G +Q +I+ + +D +
Sbjct: 75 EQNQLDRALTLYRQAIAASPELVPAYYGLGVALRQKGDIQGAINAHRQAITIDKSYTPAY 134
Query: 204 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGA 263
LGIA +Q GD + +Q I L K + LA A N G
Sbjct: 135 YGLGIALYQKGDSSGAIDAYQQFI----------------QLSKADTNLAPAYYNL--GL 176
Query: 264 CLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 323
++ + ++ A A++ DPK A L G+ + + KA +L P
Sbjct: 177 AYERRNNIDEAVASFRKAIEFDPKYALAHNGLGTVLRRQGNRKEAIAAYRKAIELAPQYA 236
Query: 324 STRYAVAVSRIKD 336
+A+ +S +D
Sbjct: 237 VAHFALGISLYED 249
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 81/186 (43%), Gaps = 15/186 (8%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPEL-LSL---------V 121
PK A AH LG + +R G +A+++Y KA E L + +A L +SL +
Sbjct: 199 PKYALAHNGLGTVLRRQGNRKEAIAAYRKAIE--LAPQYAVAHFALGISLYEDRDYTGAI 256
Query: 122 QIHHAQCLLPESSGDNSLDKELEPEELEE---ILSKLKESMQSDTRQAVVWNTLGLILLK 178
+ + L + + + L +L + ++ +++++ D R A ++ LG + L+
Sbjct: 257 EAYKRVTTLEPNFPNVYYNLGLAYNQLSDRPNAIATFRKAIEQDPRNADIYAILGSVFLR 316
Query: 179 SGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALI 238
+ + ++P LG+A + GD+E + +Q I + N+ A
Sbjct: 317 DENIPEAAEAFKRSTEINPKVASSFNGLGLALRRQGDLEGAIAAYQKSITINPNYAVAYN 376
Query: 239 NYAALL 244
N +L
Sbjct: 377 NLGRVL 382
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 30/178 (16%), Positives = 73/178 (41%), Gaps = 21/178 (11%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
++E ++ +++++ D + A+ N LG +L + G + +I+ + + P LG
Sbjct: 184 IDEAVASFRKAIEFDPKYALAHNGLGTVLRRQGNRKEAIAAYRKAIELAPQYAVAHFALG 243
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 267
I+ ++ D + + ++ + + N P N G +Q
Sbjct: 244 ISLYEDRDYTGAIEAYKRVTTLEPNFPNVYYNL---------------------GLAYNQ 282
Query: 268 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
S A A++ DP+ A I+A L + + + + + +++ ++ P S+
Sbjct: 283 LSDRPNAIATFRKAIEQDPRNADIYAILGSVFLRDENIPEAAEAFKRSTEINPKVASS 340
>gi|391337300|ref|XP_003743008.1| PREDICTED: transmembrane and TPR repeat-containing protein 3-like
[Metaseiulus occidentalis]
Length = 827
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 123/300 (41%), Gaps = 28/300 (9%)
Query: 44 SGLGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEE 103
+ +G + ++E +LK +R P + + LG + +L + +A ++Y +A
Sbjct: 463 NNVGFAYQQQDEHERALKF-FTEASRLQPDDIGSFINLGRAFSKLNRLTEAEAAYSRAHA 521
Query: 104 ILLRCEADIARPEL-LSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSD 162
+L R ++ + EL L+ ++ L + +NS L E S KE++
Sbjct: 522 LLPRRTSESSEVELRLAPAHLNLFVNLANLITRNNS--------RLSEADSLYKEAIAMK 573
Query: 163 TRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSA-K 221
+ G ILLK GRL ++ + + + P + D NLG+ + G+ +A +
Sbjct: 574 NDYVDAYTNRGEILLKMGRLSEAVEMYKKAVRLKPLDADAHFNLGVVLMKLGNHSDNAVQ 633
Query: 222 CFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAA 281
F ++ D+ H AL+ +L +C A G D+ + + E +
Sbjct: 634 EFLTVLSLDKMHQNALV---SLSMCLQHVSEARMRRRLG-----DRVQELGLLHERI--- 682
Query: 282 LKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ 341
A H+W NLA D + + KA + P+ S + + V +D +Q
Sbjct: 683 ------AEHVWFNLAMVAVQETDRVRAERFFRKALTVNPDFRSALFNLGVLLYEDQRYNQ 736
>gi|171689182|ref|XP_001909531.1| hypothetical protein [Podospora anserina S mat+]
gi|170944553|emb|CAP70664.1| unnamed protein product [Podospora anserina S mat+]
Length = 846
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
LEE ++ + ++ ++ N L ++L + L +++ +D NN + G+LG
Sbjct: 17 LEEAMTCYERALTANPNSINALNALSVVLRTQENFPKAAEYLHAIIKLDGNNGEAWGSLG 76
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYA-ALLLCKYGSV 251
Y D++Q+ + +Q+ +LK N + Y +L +YGS+
Sbjct: 77 HCYLMMDDLQQAYQAYQNALLKLPNPKEPRLWYGIGILYDRYGSL 121
>gi|15606205|ref|NP_213582.1| hypothetical protein aq_854 [Aquifex aeolicus VF5]
gi|2983399|gb|AAC06984.1| hypothetical protein aq_854 [Aquifex aeolicus VF5]
Length = 545
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 146/396 (36%), Gaps = 61/396 (15%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P N ++LLG +Y G K + + KA E + P +LSL ++ +
Sbjct: 148 PDNPLPYYLLGRIYLAKGDIQKGMEYFLKALE-----KKKYYAPAVLSLGNLYLQEKKFK 202
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
E+ EEL K ++ + L + SGR++ +I +
Sbjct: 203 EA------------EEL------YKSVLEKYPNSPKILEKLAKLYTASGRIEEAIKIYEK 244
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 251
L+ + P N + + +G+ +++ K ++L + ++P YA L
Sbjct: 245 LINLKPRNVNYKTEYALLLLSTGEFDKAKKILEELYYVNPSNPNVAFAYALTLEA----- 299
Query: 252 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 311
TGE + AKE L P+ + L Y G++ + +
Sbjct: 300 -------TGE---------LKKAKEIYENLLNRFPENIKVIERLIGIYLDLGNYEDAKRL 343
Query: 312 LEKAAKLEPNCMSTRY--AVAVSRIKDAERSQEPTEQLSW-AGNEMASILREGDPVQIEP 368
+EKA L P+ + A S+ K +++ E ++L N+ E
Sbjct: 344 IEKAKVLAPDKKEILFLEADYYSKTKQYDKALEILKKLEKDYPNDSRVYFMEA------- 396
Query: 369 PIAWAGFAAVQKTHHEVAAAFETE-ENELSKMEECAGAGESAFLDQASA-VNVAKECLLA 426
I + ++ + A E + EN + G S L V A+E +
Sbjct: 397 -IVYDNLGDIKNAEKALRKAIELDPENP----DYYNYLGYSLLLWYGKERVEEAEELIKK 451
Query: 427 ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVL 462
AL+ DP+ ++ YYL GD+ + + L K L
Sbjct: 452 ALEKDPENPAYIDSMGWVYYLKGDYERAMQYLLKAL 487
>gi|310794486|gb|EFQ29947.1| tetratricopeptide [Glomerella graminicola M1.001]
Length = 885
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
LEE + ++Q++ + N + LIL ++ L ++L +D N + G+LG
Sbjct: 61 LEEAMKAYDRALQANPQSVAAMNAISLILRTREEFHKAVDYLQAILKIDNTNGEAWGSLG 120
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYA-ALLLCKYGSV 251
Y D++Q+ +Q ++ ++ + Y +L +YGS+
Sbjct: 121 HCYLMMDDLQQAYAAYQSALVNLRSPREPKLWYGIGILYDRYGSL 165
>gi|242278768|ref|YP_002990897.1| hypothetical protein Desal_1296 [Desulfovibrio salexigens DSM 2638]
gi|242121662|gb|ACS79358.1| TPR repeat-containing protein [Desulfovibrio salexigens DSM 2638]
Length = 206
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 166 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK-CFQ 224
AV W +G + ++ G +I L + DPN + LG AYF G+++ + C +
Sbjct: 93 AVPWGNIGYVYMEQGETDKAIKALKRAIKYDPNFVQALSTLGAAYFNEGELDDCIEVCEK 152
Query: 225 DLILKDQNHPA 235
L L D PA
Sbjct: 153 ALKLADNFGPA 163
>gi|431797887|ref|YP_007224791.1| hypothetical protein Echvi_2535 [Echinicola vietnamensis DSM 17526]
gi|430788652|gb|AGA78781.1| tetratricopeptide repeat protein [Echinicola vietnamensis DSM
17526]
Length = 315
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 76/170 (44%), Gaps = 11/170 (6%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEE--------ILLRCEADIARPELLS-LVQ 122
P + +FL GL+ + LG A+ ++++A E + + R + S
Sbjct: 130 PDDYRGYFLRGLVQETLGNYETALQAFDQAIEHDQTITDLYVNKATIQYYRKDYKSATTN 189
Query: 123 IHHAQCLLPESSGDNSLDK--ELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSG 180
++ A+ L PE +L E + ++ L + +++ + QA +N GL L G
Sbjct: 190 LNKAESLNPEEPNIFNLRSLIAFERDAIDSALKWVNKAIDLNAGQAYFYNNRGLYYLFDG 249
Query: 181 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 230
+++ I ++ L + N + N GI Y+ SG+ + K Q++ KD
Sbjct: 250 QMERGIEDINFSLKQNSKNLFALRNKGIYYYLSGNKPLAIKYLQEVYSKD 299
>gi|298492037|ref|YP_003722214.1| hypothetical protein Aazo_3466 ['Nostoc azollae' 0708]
gi|298233955|gb|ADI65091.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
Length = 374
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 72/167 (43%), Gaps = 21/167 (12%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
E ++ ++++ ++ + A LG+IL + R Q +I+ + +D NN + NL I
Sbjct: 148 EAAIAAYRQALAANPKMAAAQYNLGVILYEEERCQEAIAAYQEAINLDRNNANAYFNLAI 207
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
A Q G +EQ+ ++ ++ + + A N +L++ + E + Q
Sbjct: 208 ALQQEGQLEQAIATYRQILKLNPENTVAYNNLGSLMVIQ---------GQPSEAIAIYQ- 257
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 315
A+ +PK A + NL Y G+ + + L++A
Sbjct: 258 -----------KAIGQNPKNALAYYNLGVTLYNQGNLKEANAALKRA 293
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 70/172 (40%), Gaps = 25/172 (14%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 128
R +P ++ LGL Q+ GQ A+++Y +A +A ++ Q +
Sbjct: 125 RLIPNFGEFYYNLGLALQKQGQKEAAIAAYRQA----------LAANPKMAAAQYNLGVI 174
Query: 129 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 188
L E E +E ++ +E++ D A + L + L + G+L+ +I+
Sbjct: 175 LYEE-------------ERCQEAIAAYQEAINLDRNNANAYFNLAIALQQEGQLEQAIAT 221
Query: 189 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 240
+L ++P N NLG G ++ +Q I QN AL Y
Sbjct: 222 YRQILKLNPENTVAYNNLGSLMVIQGQPSEAIAIYQKAI--GQNPKNALAYY 271
>gi|397781376|ref|YP_006545849.1| TPR repeat-containing protein [Methanoculleus bourgensis MS2]
gi|396939878|emb|CCJ37133.1| TPR repeat-containing protein [Methanoculleus bourgensis MS2]
Length = 1067
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 81/201 (40%), Gaps = 20/201 (9%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI-- 203
+E E + + E +DT W G +L + GR + A+D N+ D +
Sbjct: 99 QEAAECFATIVEKKPADTN---AWYWRGEMLERLGRYADVAEAYAR--ALDGNSEDVVLQ 153
Query: 204 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK---------YGSVLAG 254
LG ++G ++A CF+ ++ + P A A LL + + VLAG
Sbjct: 154 EKLGRTLERTGAYREAAACFERILRANPESPGAFARKGAALLYRGDYSGAVASFDRVLAG 213
Query: 255 AGAN----TGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGK 310
N G+ L+ A +C ADP + + +G + + +
Sbjct: 214 DPHNLDALYGKARALEHLGRFQDAADCYGMITAADPGNTPALHHQGSLLLRSGRYAEALE 273
Query: 311 CLEKAAKLEPNCMSTRYAVAV 331
C +K A +P+ M+ RY++ +
Sbjct: 274 CFDKVALADPDNMAVRYSMGL 294
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 86/219 (39%), Gaps = 18/219 (8%)
Query: 137 NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVD 196
N + + E E + +++++ D V ++G L GR + L L
Sbjct: 19 NQGNAQFEAGNYTEAVKSFEKALRIDPENGPVRLSMGRALACLGRDGEAAEWLRKALDSS 78
Query: 197 PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVL-A 253
P + + LG ++GD +++A+CF ++ K A +L L +Y V A
Sbjct: 79 PGDAGILRALGHVLARTGDYQEAAECFATIVEKKPADTNAWYWRGEMLERLGRYADVAEA 138
Query: 254 GAGANTGE----------GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTG 303
A A G G L++ A A C L+A+P++ +A A G
Sbjct: 139 YARALDGNSEDVVLQEKLGRTLERTGAYREAAACFERILRANPESPGAFARKGAALLYRG 198
Query: 304 DHRSSGKCLEKAAKLEPNCMSTRYAVA-----VSRIKDA 337
D+ + ++ +P+ + Y A + R +DA
Sbjct: 199 DYSGAVASFDRVLAGDPHNLDALYGKARALEHLGRFQDA 237
>gi|198461122|ref|XP_001361920.2| GA17918 [Drosophila pseudoobscura pseudoobscura]
gi|198137242|gb|EAL26499.2| GA17918 [Drosophila pseudoobscura pseudoobscura]
Length = 933
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 57/138 (41%), Gaps = 21/138 (15%)
Query: 126 AQCLLPESSGDNSLDKELEPEELEEIL----------SKLKE---------SMQSDTRQA 166
A+ L P++ S + P L + ++L+E SM+SD QA
Sbjct: 580 AKALFPQAKPGVSYHARIAPNHLNVFINLANLIAKNQTRLEEADHLYRQAISMRSDYVQA 639
Query: 167 VVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDL 226
+ G IL+K R + V L D N D NLG+ + + G +Q+ F
Sbjct: 640 YI--NRGDILMKLNRTAQAQEVYEQALLYDSENADIYYNLGVVFLEQGKSQQAQVYFNKA 697
Query: 227 ILKDQNHPAALINYAALL 244
I +H AL+N A LL
Sbjct: 698 IELYPDHEQALLNSAILL 715
>gi|17228118|ref|NP_484666.1| hypothetical protein alr0622 [Nostoc sp. PCC 7120]
gi|17129968|dbj|BAB72580.1| alr0622 [Nostoc sp. PCC 7120]
Length = 547
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 96/271 (35%), Gaps = 69/271 (25%)
Query: 180 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 239
G +SI S L +NC+ G++Y+Q GD E AA+ +
Sbjct: 267 GEYTASIKNYSQALQASSDNCELYYKRGLSYYQLGDYE-----------------AAIAD 309
Query: 240 YAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 299
Y+ + L A + G L Q +A A + A++ +P AA I+ N A A
Sbjct: 310 YSQAININ----LHDAKSYHKRGLALSQLAAYEAAIDDYNQAIRINPHAASIYKNRAEAR 365
Query: 300 YLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILR 359
GD++ + + +A K+ P T +SR A +
Sbjct: 366 SHLGDNQGAIEDYTQAIKINPQYADTYKNRGISRYLLATQP------------------- 406
Query: 360 EGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNV 419
GF K + A A++ N + + + GA E +QA +N
Sbjct: 407 --------------GFTQAIKINPNDANAYKNRGNARADIGDYLGAIED--YNQAIQIN- 449
Query: 420 AKECLLAALKADPKAAHIWANLANAYYLTGD 450
PKAA + N NA Y GD
Sbjct: 450 ------------PKAADAYYNRGNARYDLGD 468
>gi|407974687|ref|ZP_11155595.1| hypothetical protein NA8A_10303 [Nitratireductor indicus C115]
gi|407429770|gb|EKF42446.1| hypothetical protein NA8A_10303 [Nitratireductor indicus C115]
Length = 281
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 29/164 (17%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEAD---IARPELLSLVQIHHAQC 128
P++ +A+ L+Y+ +GQ KA++ Y +A I L D I R E+ L
Sbjct: 97 PRSHNAYANRALIYRYMGQNDKALADYNQA--IALNSSYDTAYIGRAEIYRL-------- 146
Query: 129 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 188
SG +S E L+ L+ ++Q DT + GL+ SG+ Q +I
Sbjct: 147 -----SGRSS-----------EALADLERAIQLDTTDPRAYYRRGLLYQASGQHQYAIED 190
Query: 189 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
++ +++ P G++Y GD E + F I D N
Sbjct: 191 FATAISLAPEAPYGYNGRGLSYLAQGDEENAFSDFNTAIRLDGN 234
>gi|322421649|ref|YP_004200872.1| hypothetical protein GM18_4182 [Geobacter sp. M18]
gi|320128036|gb|ADW15596.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp. M18]
Length = 1442
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
EL+ + + + D WN LG+ L GRL+ ++ L+V+P + NL
Sbjct: 1041 ELDLAEATFRGILAGDPGYLPSWNALGIALQVQGRLEEAVQCYRKALSVNPGYLHALNNL 1100
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL 245
G A G+++Q+ +C++ ++ D + A N A + L
Sbjct: 1101 GSASRALGEVDQAIECYRKVLSIDPEYADARWNLALVQL 1139
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 73/180 (40%), Gaps = 21/180 (11%)
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
+ ++ D A W+ L L L ++G Q ++ L ++ P + NLG Y G+
Sbjct: 982 RHALAIDPALARGWHNLALALKETGEQQQALHALKRAVSAAPGYLEARHNLGELYHAMGE 1041
Query: 216 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 275
++ + F+ ++ D P L ++ AL G L + A
Sbjct: 1042 LDLAEATFRGILAGD---PGYLPSWNAL------------------GIALQVQGRLEEAV 1080
Query: 276 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 335
+C AL +P H NL +A G+ + +C K ++P R+ +A+ +++
Sbjct: 1081 QCYRKALSVNPGYLHALNNLGSASRALGEVDQAIECYRKVLSIDPEYADARWNLALVQLQ 1140
>gi|254412148|ref|ZP_05025923.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
gi|196181114|gb|EDX76103.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
Length = 427
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 77/194 (39%), Gaps = 15/194 (7%)
Query: 162 DTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 221
D A LGL+L + G ++ +IS +A+DPN NLG+A GD E +
Sbjct: 115 DPNMAEAHYNLGLMLYQQGNIEEAISAYQQAIAIDPNLAAARYNLGLALEAVGDTEAALS 174
Query: 222 CFQDLILKDQNHPAALINYAALLLCKYGSV------LAGAGANTGE--------GACLDQ 267
+ + + N A N ALLL K V L A N + G L Q
Sbjct: 175 EYTQAVRLNPNSAVAKYN-LALLLAKQNQVDSAIAALRQALRNDSQFVQAHYQLGLLLAQ 233
Query: 268 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 327
+ + AK L A + + + A L + GD + + +++P+ +
Sbjct: 234 QNQITEAKNSFLRATQINSRFAPAHYRLGLIFLQQGDAEEAIRRFNWVTQIDPDNVDAYR 293
Query: 328 AVAVSRIKDAERSQ 341
+ + I++ E Q
Sbjct: 294 QLGAALIQNGEYEQ 307
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
++ E + + Q ++R A LGLI L+ G + +I + + +DP+N D L
Sbjct: 236 QITEAKNSFLRATQINSRFAPAHYRLGLIFLQQGDAEEAIRRFNWVTQIDPDNVDAYRQL 295
Query: 207 GIAYFQSGDMEQSAKCFQDLILKD 230
G A Q+G+ EQ+ + I D
Sbjct: 296 GAALIQNGEYEQAIAALERAISLD 319
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
++++Q D + LG L + G++ ++ + +DPN + NLG+ +Q G
Sbjct: 74 FRKALQEDPFIPMARYLLGNALFQQGQIAAAAEQYQMAIGLDPNMAEAHYNLGLMLYQQG 133
Query: 215 DMEQSAKCFQDLILKDQNHPAALIN 239
++E++ +Q I D N AA N
Sbjct: 134 NIEEAISAYQQAIAIDPNLAAARYN 158
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 72/177 (40%), Gaps = 23/177 (12%)
Query: 52 SREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEAD 111
+++ +V S L R + AH+ LGL+ + Q +A +S+ +A +I R
Sbjct: 198 AKQNQVDSAIAALRQALRNDSQFVQAHYQLGLLLAQQNQITEAKNSFLRATQINSRFAPA 257
Query: 112 IARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNT 171
R L+ L Q GD EE + + Q D +
Sbjct: 258 HYRLGLIFLQQ------------GD-----------AEEAIRRFNWVTQIDPDNVDAYRQ 294
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 228
LG L+++G + +I+ L +++DP + NL +A ++ E + +Q IL
Sbjct: 295 LGAALIQNGEYEQAIAALERAISLDPYDSLAHYNLAVALHRNQQYEDAISEYQQAIL 351
>gi|119900196|ref|YP_935409.1| hypothetical protein azo3907 [Azoarcus sp. BH72]
gi|119672609|emb|CAL96523.1| conserved hypothetical protein [Azoarcus sp. BH72]
Length = 449
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 79/190 (41%), Gaps = 21/190 (11%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
E+EE ++ ++ S+ VWN LG ILL G + L + P+ NL
Sbjct: 65 EVEESITLMRRSLALRPDAPGVWNNLGNILLDLGYFDDAGDAYEECLRLAPDEPLVRNNL 124
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
G+ G +E++ ++D++ +D + A N G++LAG G E A
Sbjct: 125 GVLRRSQGRLEEAEAAYRDVLARDPKNIDAHNN--------LGNLLAGLGRI--EEAVRH 174
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 326
+V + + A+P + L AYY+ G + + + EP+ + R
Sbjct: 175 YCESVTL--------MPANPAVRKM---LGYAYYMLGRYEEAAEFYRNWLAAEPDNATAR 223
Query: 327 YAVAVSRIKD 336
+ +A +D
Sbjct: 224 HHLAACTGQD 233
>gi|212638583|ref|YP_002315103.1| TPR -repeat containing protein [Anoxybacillus flavithermus WK1]
gi|212560063|gb|ACJ33118.1| TPR -repeat containing protein [Anoxybacillus flavithermus WK1]
Length = 221
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 21/112 (18%)
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 266
GI Y Q G E++ KCF + I + N P IN +G+VLA G +
Sbjct: 10 GIQYMQQGQYEEAVKCFHEAIERQPNDPVGYIN--------FGNVLAAVG---------E 52
Query: 267 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 318
+ A+ + AL+ D KAA + L + YY + + E+A ++
Sbjct: 53 EEKAIRFFHK----ALELDEKAATAYYGLGSIYYNRQQFERAKEQFERAIRV 100
>gi|150400673|ref|YP_001324439.1| hypothetical protein Maeo_0235 [Methanococcus aeolicus Nankai-3]
gi|150013376|gb|ABR55827.1| Tetratricopeptide TPR_2 repeat protein [Methanococcus aeolicus
Nankai-3]
Length = 554
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 41/80 (51%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
EE L+ + + + D +W+ G +L K G+ + ++ V ++ L++DP N + ++
Sbjct: 349 FEEALNYIDKQINRDMDNIDLWSLKGYVLFKMGKYRETLGVYNNALSIDPTNIGILESIA 408
Query: 208 IAYFQSGDMEQSAKCFQDLI 227
I Y G + + ++ L+
Sbjct: 409 ITYENLGKFNDAIRTYEKLL 428
>gi|75909502|ref|YP_323798.1| hypothetical protein Ava_3295 [Anabaena variabilis ATCC 29413]
gi|75703227|gb|ABA22903.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
Length = 311
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 89/219 (40%), Gaps = 38/219 (17%)
Query: 117 LLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLIL 176
LLSL+ + +CL P ++ ++ K L L + L + +Q+
Sbjct: 13 LLSLILL--GECLTPANATIPAIPKLLAQYSLPTAPTLLNQGLQA--------------- 55
Query: 177 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 236
+++GR+Q +I+ S + +DPN NLG+A Q+G ++ +A F D N A
Sbjct: 56 IQAGRIQDAIAAFQSAIQLDPNLAAAHYNLGLALRQTGQLQPAADAFYRATQSDPNFALA 115
Query: 237 LINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 296
N GS+L EG L QA+ + L AL+ +P+ NL
Sbjct: 116 FANLG-------GSLL--------EGNNLQQAN------DYLQRALELEPRLGFAHYNLG 154
Query: 297 NAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 335
+ + +KA +L N Y + + ++
Sbjct: 155 LVRQQQQNWEGAIASFQKAVELSKNAPEPHYYLGLCYLQ 193
>gi|407783154|ref|ZP_11130359.1| methyltransferase [Oceanibaculum indicum P24]
gi|407203625|gb|EKE73611.1| methyltransferase [Oceanibaculum indicum P24]
Length = 462
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 25/146 (17%)
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQ--SGDMEQSAKCFQDLILKDQNH 233
L +SGR ++I+ +LL + P + + LG+A Q +G+ E++A +++L D
Sbjct: 107 LARSGRPATAITAYEALLRLRPGHAGAL--LGLARLQAVTGEQERAADTYRELCRIDPRD 164
Query: 234 PAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWA 293
P A ALL+ LD A+ A E L AL+ DP A A
Sbjct: 165 PVAAQELGALLI------------------GLD---ALPEAVEALQRALRLDPSNAESHA 203
Query: 294 NLANAYYLTGDHRSSGKCLEKAAKLE 319
+L A+ L G+ + L +A +L+
Sbjct: 204 HLGRAWMLLGEREKARASLARALELD 229
>gi|357042504|ref|ZP_09104209.1| hypothetical protein HMPREF9138_00681 [Prevotella histicola F0411]
gi|355369456|gb|EHG16851.1| hypothetical protein HMPREF9138_00681 [Prevotella histicola F0411]
Length = 533
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 13/142 (9%)
Query: 193 LAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK----- 247
L++DP N D + ++G Y + + + + ++ D +HP AL+N A+ C
Sbjct: 161 LSLDPGNLDIMCDIGDTYVNEDKLSKGMEYYNKVLSVDPSHPKALLN-RAISYCTDNNYE 219
Query: 248 --YGSVLAGAGANTGEGACL-----DQASAVNVAKECLLAALKADPKAAHIWANLANAYY 300
G +L + +G L D + E L +KADPK L + Y
Sbjct: 220 KGIGDLLTLVKTDNIDGYKLLLSLTDSIPIREIVIEQLNTRMKADPKEQLYPFTLGSIYS 279
Query: 301 LTGDHRSSGKCLEKAAKLEPNC 322
GDH + K ++A +E N
Sbjct: 280 NAGDHSLALKAYQQAFNIEKNA 301
>gi|297477542|ref|XP_002689441.1| PREDICTED: tetratricopeptide repeat protein 37 [Bos taurus]
gi|296485034|tpg|DAA27149.1| TPA: tetratricopeptide repeat domain 37 [Bos taurus]
Length = 1563
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 134 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL--GLILLKSGRLQSSISVLSS 191
SG ++D +E EE+E L+ L Q + W L GL LK+G+ +++ L +
Sbjct: 530 SGAAAVDLSVELEEMETALAILTTVTQKASAGTAKWAWLRRGLYYLKAGQHSQAVADLQA 589
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 223
L DP + +C +LG AY G + K F
Sbjct: 590 ALRADPKDFNCWESLGEAYLSRGGYTTALKSF 621
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 278 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
L AAL+ADPK + W +L AY G + ++ K KA++L P + + VA
Sbjct: 587 LQAALRADPKDFNCWESLGEAYLSRGGYTTALKSFTKASELNPESTYSVFKVA 639
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 103/289 (35%), Gaps = 59/289 (20%)
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
GL L G L + ++ LL+ P+ + + +F D Q+ KCFQ + KD
Sbjct: 393 GLAYLNKGSLDEASKIMEDLLSSYPDLTEVHALEALIHFTKKDYLQAEKCFQQALEKDPE 452
Query: 233 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 292
+ +Y L + GE A D+ A+ L A K D ++
Sbjct: 453 ------------VAEYHYQLGLTYWSMGEEARKDKTKALT----HFLKAAKLDTYMGKVF 496
Query: 293 ANLANAYY-LTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAG 351
L + Y + GD + C KA +L+ DAE + LS
Sbjct: 497 CYLGHYYKDVVGDKNRARGCYRKAFELDDT--------------DAESGAAAVD-LSVEL 541
Query: 352 NEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFL 411
EM + L V + A +A +++ + + AG A
Sbjct: 542 EEMETALAILTTVTQKASAGTAKWAWLRRGLYYLK----------------AGQHSQAVA 585
Query: 412 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 460
D L AAL+ADPK + W +L AY G + ++ K K
Sbjct: 586 D-----------LQAALRADPKDFNCWESLGEAYLSRGGYTTALKSFTK 623
>gi|261403119|ref|YP_003247343.1| serine/threonine protein kinase [Methanocaldococcus vulcanius M7]
gi|261370112|gb|ACX72861.1| serine/threonine protein kinase with TPR repeats
[Methanocaldococcus vulcanius M7]
Length = 1173
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 17/156 (10%)
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI-----------AYFQSGDMEQSAKCFQ 224
L ++G +++ +L ++PN+ + NL I F+S E + F+
Sbjct: 70 LFENGAYNNALKKYEEILKLNPNDTNIKTNLNICKEKILLNEGELLFRSKKYEDALSKFK 129
Query: 225 DLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKA 284
+++ D + A A + + + ++L N ++ N A + ALK
Sbjct: 130 EVLKIDSKNSIAK---AKIKMIE--NILRIEEINKTAKNLFNKGK-YNDAIKLYNEALKL 183
Query: 285 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
DPK +W N N YY D++ + KC EKA L P
Sbjct: 184 DPKNDVLWNNCGNVYYALKDYQMALKCYEKALSLNP 219
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 398 KMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 457
++EE ++ F N A + ALK DPK +W N N YY D++ + KC
Sbjct: 153 RIEEINKTAKNLF--NKGKYNDAIKLYNEALKLDPKNDVLWNNCGNVYYALKDYQMALKC 210
Query: 458 LEKVL 462
EK L
Sbjct: 211 YEKAL 215
>gi|255603246|ref|XP_002538013.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
gi|223514189|gb|EEF24370.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
Length = 259
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/227 (18%), Positives = 95/227 (41%), Gaps = 35/227 (15%)
Query: 2 SKEMDVAEVEGKKINKLGKC-----RSRISSKMDSALEFGVDADGDQSGLGTSSSSREEK 56
+K+ + ++ + + +G+ R R ++K D D L + E+
Sbjct: 50 AKQAQLYYLDARALKNMGRTQEAILRLRTATKFDPQQSQAFSECVD---LMLQAQQPEQA 106
Query: 57 VSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPE 116
+ L+ + P++AH H+ LG++ Q+L +A+ ++A I + D A
Sbjct: 107 ANMLRQAVA----AHPEHAHFHYRLGVLCQQLQATDEALQCMQQAINI----QPDFA--- 155
Query: 117 LLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLIL 176
+ +H + L+ + G + + L ++ V +N G++L
Sbjct: 156 -----EAYHQRALMLQLQG-----------QTQAALDSFNGAIHYQPNLPVPYNNRGVVL 199
Query: 177 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 223
+ G+ ++I+ L ++P NLG+A +++GD +++ C
Sbjct: 200 CQLGQYPAAITDFRQALQLNPGYASAYCNLGLALYENGDTDEAYSCL 246
>gi|393724700|ref|ZP_10344627.1| SEC-C motif domain-containing protein [Sphingomonas sp. PAMC 26605]
Length = 745
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
L++ L+ + ++ R + G IL +GR ++I+ + +A+ P + NLG
Sbjct: 160 LDQALAAIDRAIVLSPRNPARYVNRGNILRAAGRRSAAIATYRNAIALQPATPEAYNNLG 219
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
+A F GD+E +A +++ I ++ A IN A L
Sbjct: 220 LALFDQGDLEGAAVQYREAIALSPHYVDAQINLADTL 256
>gi|374999506|ref|YP_004975594.1| hypothetical protein AZOLI_p60009 [Azospirillum lipoferum 4B]
gi|357428477|emb|CBS91434.1| conserved protein of unknown function; putative TPR domains
[Azospirillum lipoferum 4B]
Length = 652
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 63/169 (37%), Gaps = 47/169 (27%)
Query: 174 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNH 233
L L ++GR + + ++L DP++ + NL + GD ++ C++ I ++
Sbjct: 38 LTLHRAGRTAEAEAGYRAVLTADPDHANANNNLAVILRARGDWNEAIDCYRRAIARNATD 97
Query: 234 PAALINYAALLL--------------------------CKYGSVLAGAGANTGEGACLDQ 267
P N+ LLL ++L G A +
Sbjct: 98 PFVHSNHGCLLLDLGRAAEAEEALRTAIRLKPDYAEAHFNLANILRSRGDREAAKAAYGE 157
Query: 268 A-------------------SAVNVAK--ECLLAALKADPKAAHIWANL 295
A AV +A+ EC +AALKADPK+A W NL
Sbjct: 158 ALRLKPDMAAALCNLGDLHKGAVELARAVECFVAALKADPKSAEAWNNL 206
>gi|347736884|ref|ZP_08869416.1| TPR repeat-containing protein II [Azospirillum amazonense Y2]
gi|346919484|gb|EGY00993.1| TPR repeat-containing protein II [Azospirillum amazonense Y2]
Length = 502
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
LG++L GR +++ L ++P + LGIA+ +GD+ Q+ CF+D + D
Sbjct: 51 LGVLLQADGRRDEAVAQYRQALVLNPFDARLHNALGIAHHDAGDLAQAMSCFEDALASDP 110
Query: 232 NHPAALINYAALL 244
+ P A N LL
Sbjct: 111 DDPQAHNNMGHLL 123
>gi|386347974|ref|YP_006046223.1| hypothetical protein [Spirochaeta thermophila DSM 6578]
gi|339412941|gb|AEJ62506.1| Tetratricopeptide TPR_2 repeat-containing protein [Spirochaeta
thermophila DSM 6578]
Length = 918
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 61/159 (38%), Gaps = 21/159 (13%)
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 232
G+I L+ R + + S L + + + NLG+ Y + GD ++ + F+ + D +
Sbjct: 52 GMIALRQDRNEEAKEAFSKALELGGEEAEALNNLGVIYRKEGDHRKAIEYFRKALAADPD 111
Query: 233 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 292
P L N A AC D A A+ AL+ DP +
Sbjct: 112 RPDILYNLA--------------------NACKD-AGLFEEAEAAYRKALEHDPHLVSAY 150
Query: 293 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 331
NLA Y G + LEK +P+ + Y + V
Sbjct: 151 NNLATLYQQRGALGKAVAVLEKGLTADPDHPTLLYNLGV 189
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 67/175 (38%), Gaps = 24/175 (13%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
EE +E SK +++ +A N LG+I K G + +I LA DP+ D + N
Sbjct: 62 EEAKEAFSK---ALELGGEEAEALNNLGVIYRKEGDHRKAIEYFRKALAADPDRPDILYN 118
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
L A +G E++ ++ + D + +A N A L
Sbjct: 119 LANACKDAGLFEEAEAAYRKALEHDPHLVSAYNNLATL---------------------Y 157
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
Q A+ A L L ADP + NL Y G + + L +A + P
Sbjct: 158 QQRGALGKAVAVLEKGLTADPDHPTLLYNLGVLYQREGRYEEARASLHRALQKRP 212
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 78/187 (41%), Gaps = 25/187 (13%)
Query: 81 LGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL-SLVQIHHAQCLLPESSGDNSL 139
LG++Y++ G KA+ + KA AD RP++L +L L E+
Sbjct: 85 LGVIYRKEGDHRKAIEYFRKA------LAADPDRPDILYNLANACKDAGLFEEAEAAYRK 138
Query: 140 DKELEPE----------------ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQ 183
E +P L + ++ L++ + +D + LG++ + GR +
Sbjct: 139 ALEHDPHLVSAYNNLATLYQQRGALGKAVAVLEKGLTADPDHPTLLYNLGVLYQREGRYE 198
Query: 184 SSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL 243
+ + L L P + + NLGI G E + CF++ + D H AA N ++
Sbjct: 199 EARASLHRALQKRPGWVEALNNLGIVEQSRGHHEAALACFREALTLDPLHAAAANNMGSI 258
Query: 244 --LLCKY 248
LL +Y
Sbjct: 259 LALLGRY 265
>gi|333987937|ref|YP_004520544.1| hypothetical protein MSWAN_1732 [Methanobacterium sp. SWAN-1]
gi|333826081|gb|AEG18743.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 578
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 111/272 (40%), Gaps = 42/272 (15%)
Query: 82 GLMYQRLGQPLKAVSSYEKAEEILLRCEADIA---RPELLSLVQIH--------HAQCLL 130
G ++ L Q KA+ SY+K E L+ E ++ + LL ++ + HA +
Sbjct: 153 GDLFYELNQFEKALESYDKVSE--LKPEMEVVWNNKGVLLDKLKRYEEAIKAYDHALIIN 210
Query: 131 P--------ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRL 182
P ++ +LD+ EE L+ L++++ + + + W+ G++L K+G
Sbjct: 211 PGLNYILNNKAVSLTALDR------FEEALTILEKNINKNPKDGIAWSIKGIVLDKAGNH 264
Query: 183 QSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAA 242
+ S ++ N + + N + ++G ++S + + + N AL+N
Sbjct: 265 KESYEAHRIAFNLEKKNPEILNNYALKLSENGLFKRSIEMYNSALNIKPNFIEALLN-KG 323
Query: 243 LLLCKYGSVLAGAG--------------ANTGEGACLDQASAVNVAKECLLAALKADPKA 288
LL+ K G A + L+ + N A + A++ +P++
Sbjct: 324 LLMDKLGKYQEAVDLYDKIIEINPKYFVAWNNKSMSLNNLNHCNDALDAAKKAIELEPES 383
Query: 289 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
A +W N + G H + K KA L P
Sbjct: 384 AEVWGNKGVSLAKMGFHEKALKSFNKAIDLNP 415
>gi|326433206|gb|EGD78776.1| TPR repeat containing protein [Salpingoeca sp. ATCC 50818]
Length = 609
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 108/259 (41%), Gaps = 40/259 (15%)
Query: 75 AHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESS 134
AH ++GL+ G+ +A++ ++KA +I LR E + + E ++ + + +
Sbjct: 274 AHLCHVVGLVLNTFGEHDQAIAYFQKALQIRLRTEGE--KGENVAALYSNLGNVYFSQGQ 331
Query: 135 GDNSLDKELEPEELEEILSKLKESM-QSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLL 193
D ++ E E+ L+ E++ + A +N LG G +I L
Sbjct: 332 YDKAI------EFYEKALAIRVETLGEKHLSTANTYNNLGNAYCSKGEYDKTIVFYDKAL 385
Query: 194 AVD--------PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALINY 240
A+ P+ D NLG+AY G+ + + + ++ + + + HP+ Y
Sbjct: 386 AIKLELLGDKHPSTADTYNNLGLAYADKGEYDTAIQHYEKALAIRVEMLGEKHPSTADTY 445
Query: 241 AALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKA----DPKAAHIWANLA 296
L A A+ GE A+ + ++ L ++A P A + NL
Sbjct: 446 HN---------LGNAYADKGE-----YDKAIELYEKDLTITVEAWGEKHPNTADSYNNLG 491
Query: 297 NAYYLTGDHRSSGKCLEKA 315
+AY+ G++ + + EKA
Sbjct: 492 SAYHSKGEYGKAIELYEKA 510
>gi|196231762|ref|ZP_03130619.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
gi|196224234|gb|EDY18747.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
Length = 873
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
EE + LK+++ W TLG + L+ G++ SI L ++P N + NL
Sbjct: 778 FEEAMESLKKAVSYRPIFGNAWTTLGYVYLQLGKIDESIDACQHALKINPQNAPNLQNLA 837
Query: 208 IAYFQSGD 215
A F+ GD
Sbjct: 838 TAAFKKGD 845
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 14/169 (8%)
Query: 73 KNAHAHFLLGL----MYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 128
+N HF + M RL + +SS+ +E+ R + D A E L Q+ H
Sbjct: 670 RNERGHFPEAVQAIEMAIRLAP--REISSWSTLQELYTRHK-DPAGQEK-ELRQLLHE-- 723
Query: 129 LLPESS-GDNSLDKELEPE-ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSI 186
LP++S G N L L E ++++ + + +++ D + AV W+TLG + G + ++
Sbjct: 724 -LPKTSTGWNFLGALLMGEGKIDDAIDAGRRAVEVDDKDAVAWDTLGCAQSRGGHFEEAM 782
Query: 187 SVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK-CFQDLILKDQNHP 234
L ++ P + LG Y Q G +++S C L + QN P
Sbjct: 783 ESLKKAVSYRPIFGNAWTTLGYVYLQLGKIDESIDACQHALKINPQNAP 831
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 26/184 (14%)
Query: 77 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGD 136
A+F LG Y ++G+P ++ +++ A AD +SL
Sbjct: 80 AYFKLGSGYLKIGKPKESAEAFQTAVG-FTPANADAWEGLGISL---------------- 122
Query: 137 NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVD 196
NSLDK + E L L+ + ++D++ + G+ LL++ + + L+ + +D
Sbjct: 123 NSLDK------INEALEALQHAAEADSKSFDICMLRGVTLLRARKTSEARDTLAKAVELD 176
Query: 197 PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY---GSVLA 253
P++ + LG Y Q G +++ F + N L N A LL + G++ A
Sbjct: 177 PDSKNAHAILGFVYLQEGKPQEAVAEFGRALKIAPNDSETLANRAIALLAMHDLPGAIAA 236
Query: 254 GAGA 257
GA
Sbjct: 237 TQGA 240
>gi|383318539|ref|YP_005379380.1| Tetratricopeptide repeat-containing protein [Methanocella conradii
HZ254]
gi|379319909|gb|AFC98861.1| Tetratricopeptide repeat-containing protein [Methanocella conradii
HZ254]
Length = 175
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E E++ L + D N G++ + GR + +I +L ++P + + + N
Sbjct: 53 EHFNEVIRLLDAILAIDPEYRDAINYKGIMFVGCGRNEDAIKCFDQVLKLNPVDKEALNN 112
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
GIA + G E++ KC + I D + A +N A +L
Sbjct: 113 KGIALYGLGRDEEALKCIEAAIAIDNRYADAYVNKAVIL 151
>gi|381160368|ref|ZP_09869600.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiorhodovibrio sp. 970]
gi|380878432|gb|EIC20524.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiorhodovibrio sp. 970]
Length = 717
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 16/164 (9%)
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
LG +L GR+Q ++S L +D + N G + G ++++ + ++ + DQ
Sbjct: 169 LGNVLRMLGRMQDALSAYDHALKLDDKDASVYANRGNVLVELGRLKEAEESYRKALAVDQ 228
Query: 232 NHPAALINYAALLL---------CKYGSVLA----GAGANTGEGACLDQASAVNVAKECL 278
+H L N+A+LLL C + + LA N GA L +N A
Sbjct: 229 DHIVTLNNWASLLLKQGKSREAICVFETALAINPKNPEVNNNYGAALRDVGELNEAIAAF 288
Query: 279 LAALKADPKAAHIWANLANAYYL---TGDHRSSGKCLEKAAKLE 319
A+ ++P +N A + D R + + AA+ E
Sbjct: 289 KQAITSEPSYYQAHSNRIMALHYREENPDQRIARAIRQFAARFE 332
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 23/163 (14%)
Query: 77 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGD 136
AHF LG + + LG+ A+S+Y+ A L+ + A S
Sbjct: 165 AHFQLGNVLRMLGRMQDALSAYDHA----LKLDDKDA-------------------SVYA 201
Query: 137 NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVD 196
N + +E L+E ++++ D V N +LLK G+ + +I V + LA++
Sbjct: 202 NRGNVLVELGRLKEAEESYRKALAVDQDHIVTLNNWASLLLKQGKSREAICVFETALAIN 261
Query: 197 PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 239
P N + N G A G++ ++ F+ I + ++ A N
Sbjct: 262 PKNPEVNNNYGAALRDVGELNEAIAAFKQAITSEPSYYQAHSN 304
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 8/95 (8%)
Query: 178 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL 237
+ G L +I+ LL PN+ D + LG+A++Q G+ EQ+A+ I D
Sbjct: 5 RRGDLAGAIAGYKELLNQAPNHADALHLLGLAFYQQGENEQAARLIDRAIQSDSQ----- 59
Query: 238 INYAALLLCKYGSVLAGAGANTGEGACLDQASAVN 272
AL YG VL A D A +N
Sbjct: 60 ---VALFYNHYGLVLYALSRTEEALAAFDAALKLN 91
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 80/192 (41%), Gaps = 13/192 (6%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
E E+ + ++QSD++ A+ +N GL+L R + +++ + L ++P N
Sbjct: 42 ENEQAARLIDRAIQSDSQVALFYNHYGLVLYALSRTEEALAAFDAALKLNPGFVKAHNNR 101
Query: 207 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVLAGAGANTGEGAC 264
G +G ++++ F + + + + +N A +L L G + C
Sbjct: 102 GAVLMGAGRLKEALAAFNNAVGLEPGNQEGHVNRAKVLGELGHLGESVESFQTAIAIDPC 161
Query: 265 LDQA--------SAVNVAKECLLA---ALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 313
L A + ++ L A ALK D K A ++AN N G + + +
Sbjct: 162 LSDAHFQLGNVLRMLGRMQDALSAYDHALKLDDKDASVYANRGNVLVELGRLKEAEESYR 221
Query: 314 KAAKLEPNCMST 325
KA ++ + + T
Sbjct: 222 KALAVDQDHIVT 233
>gi|166366084|ref|YP_001658357.1| glycosyl transferase family protein [Microcystis aeruginosa
NIES-843]
gi|166088457|dbj|BAG03165.1| probable glycosyl transferase [Microcystis aeruginosa NIES-843]
Length = 403
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
E E E LS +++++ D A + LGL+L + RL SI L ++ +N
Sbjct: 289 EAENYEAALSVFEKTVEIDPSYADGYYNLGLVLKQLHRLPESIKAYKKALKLNQDNPTIY 348
Query: 204 GNLGIAYFQSGDMEQSAKCFQD--LILKDQ 231
NLG+AY G ++ K +Q +LKDQ
Sbjct: 349 QNLGVAYIVFGSYNEAIKIWQKGLQLLKDQ 378
>gi|91200490|emb|CAJ73538.1| similar to N-acetylglucosaminyltransferases (O-GlcNAc transferase)
[Candidatus Kuenenia stuttgartiensis]
Length = 568
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/253 (19%), Positives = 100/253 (39%), Gaps = 44/253 (17%)
Query: 75 AHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESS 134
A AH+ LGL+ + G +A++S EKA I ++ P L +I+ + +P+ +
Sbjct: 293 AEAHYNLGLILSKEGNSKEAIASLEKAIAI-----SNAIAPAHFKLGEIY-TKINMPDKA 346
Query: 135 GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLA 194
LS + + D + G + + G + SI +
Sbjct: 347 -----------------LSAYESAFSDDPSYEEAYYNYGELAAEIGDVDKSIRAWKKTIE 389
Query: 195 VDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAG 254
++P N D NLG+A + G ++ + + ++ + + L N LA
Sbjct: 390 INPTNTDAYFNLGVALYNQGKIDNAISMWSKVLETNPDDYTTLNN------------LAD 437
Query: 255 AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 314
A G +++ A + ++ P + ++ L NAY + S+ C E+
Sbjct: 438 AYEAKG---------SIDKAIKTWEKIVEGHPVNSLVYYKLGNAYTKKNKYNSALACWEQ 488
Query: 315 AAKLEPNCMSTRY 327
A ++P+ ++ +
Sbjct: 489 AVIIDPDFVNAYF 501
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
E E S LKE ++ + A + T+ L+ L++ ++ S L+ + +D NN D ++
Sbjct: 138 EYTEAFSALKECLKLNPSMAEAYYTMALLYLETNKINESFDYLNKAIKLDSNNPDFHFSM 197
Query: 207 GIAYFQSGDMEQSAKCFQ 224
G+A+++ E++ FQ
Sbjct: 198 GLAFYKKNMPEKALTEFQ 215
>gi|17232349|ref|NP_488897.1| hypothetical protein all4857 [Nostoc sp. PCC 7120]
gi|17133994|dbj|BAB76556.1| all4857 [Nostoc sp. PCC 7120]
Length = 395
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 69/158 (43%), Gaps = 21/158 (13%)
Query: 78 HFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDN 137
H+ LG+ Y RL P +A++ Y+ A ++ + +L L ++ LL S N
Sbjct: 242 HYHLGIAYNRLKNPQQAITHYQTAIKLPIY--------PMLKLGAYNNLGSLLKASGDLN 293
Query: 138 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 197
K E +++ D+ A LG+I G +I+ + + P
Sbjct: 294 GAKKTYE------------TALKIDSNFATGHYNLGMICKAMGLFTEAIACYQKAIKLKP 341
Query: 198 NNCDCIGNLGIAYFQSGDMEQSAKCFQD-LILKDQNHP 234
+ + NLG+ + G++ S F++ +IL +Q++P
Sbjct: 342 SYAEAYQNLGVVQLKVGNVPASITAFKNAIILHEQDNP 379
>gi|326430054|gb|EGD75624.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818]
Length = 785
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 107/270 (39%), Gaps = 40/270 (14%)
Query: 81 LGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNS-L 139
+G+ Y + G+ KA+ E A ILLR E + S+ ++ L E+ D
Sbjct: 322 IGIAYTKKGEYDKALGFLEAALAILLRTEGENGD----SVATVY---TNLGEAYDDKGEY 374
Query: 140 DKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAV---- 195
DK +E + ++ K Q R AV +N LG G + LA+
Sbjct: 375 DKAIEHHKKGLAITAKKLGEQH-VRTAVAYNNLGAAYHGKGEFDKAAECYQKALAIRVEA 433
Query: 196 ----DPNNCDCIGNLGIAYFQSGDMEQSAKCFQ---DLILKD--QNHPAALINYAALLLC 246
PN NLGIA G +++ + ++ ++ ++ + HP+ Y L L
Sbjct: 434 LGEKHPNTAASYNNLGIACSNDGQYDRAIENYEKAKEVFVETLGETHPSTASIYDNLGL- 492
Query: 247 KYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALK----ADPKAAHIWANLANAYYLT 302
A A+ G D A+ ++ L AL+ P A + NL NA+
Sbjct: 493 --------AYASNG-----DHDKAIEHYEKALAIALERLGEKHPTTAQSYGNLGNAFDSK 539
Query: 303 GDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 332
GDH + + LEKA + + ++ S
Sbjct: 540 GDHDKAIEYLEKALAIRVETLGDKHPSTAS 569
>gi|323527669|ref|YP_004229822.1| tetratricopeptide repeat-containing protein [Burkholderia sp.
CCGE1001]
gi|323384671|gb|ADX56762.1| Tetratricopeptide TPR_1 repeat-containing protein [Burkholderia sp.
CCGE1001]
Length = 602
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 66/167 (39%), Gaps = 21/167 (12%)
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
+ ++++ D A W+ GL GRL + L + P+ D N G+A G
Sbjct: 77 MSQALKHDRHDAACWSNRGLAAAALGRLDEATICYDQALQLQPDFADARNNFGVALQAQG 136
Query: 215 DMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 274
++ + + ++ I + AL++ A+ G L + A
Sbjct: 137 ALDDAIEQYRLAIASN----PALVD-----------------AHLNLGTALGKLGRFAEA 175
Query: 275 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
C AL+ DP +A N NA+ G+H ++ E+A L P+
Sbjct: 176 LACYRDALRLDPTSAEAHFNAGNAHNAQGEHEAAVASFERALALRPD 222
>gi|88602724|ref|YP_502902.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
gi|88188186|gb|ABD41183.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
Length = 1067
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 80/224 (35%), Gaps = 47/224 (20%)
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 214
KE ++ D + +W G++L K R + ++ + + L DP+N LG++ + G
Sbjct: 18 FKEGLRIDPENSELWYQTGIVLAKQERHRDAMKMYRNALKYDPDNLQAQLRLGMSMHEVG 77
Query: 215 DMEQSAKCFQDLILKDQNHPAALINYAA--LLLCKYGSVLA------GAGANTGE----- 261
+++ L+ ++ + + A L L K+ L GA E
Sbjct: 78 MYKEAIPVLTRLVERESENDQGWMYRGACYLALGKFREALTDLDMAIDWGAEQAEVWVLK 137
Query: 262 -------GACLDQASAVNVAKE---------------------------CLLAALKADPK 287
G D A A E L ALK DP
Sbjct: 138 GYCHVQLGEYTDALDAYYFAIEINPDDPVAFFGLANTLVHLEEREQAIDALKKALKIDPD 197
Query: 288 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 331
A W +A+ +GD + E KLEP + TRY+ ++
Sbjct: 198 YADAWRMIADLLADSGDIPQATSAYEHVLKLEPWDLDTRYSYSI 241
>gi|435851554|ref|YP_007313140.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica
DSM 15978]
gi|433662184|gb|AGB49610.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica
DSM 15978]
Length = 181
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 61/170 (35%), Gaps = 21/170 (12%)
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
E I + +E + + + + WN G+ L +GR + ++ +DP N N G
Sbjct: 28 ENITQETEEIVYEEAQNSTEWNNKGVDLFIAGRPEEALQAYDKATDIDPQNIYAWYNKGN 87
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
AY G E++ + + D A A + + LD
Sbjct: 88 AYSYIGKYEEALQAYNKTTQIDPQD---------------------ANAWSNKANALDNL 126
Query: 269 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 318
A E L LK DP+ A+ W N G + C +KA +L
Sbjct: 127 GRYEEALEALDKTLKIDPQYANAWYNKGAVLEKLGRQEEAQVCYDKAREL 176
>gi|409912511|ref|YP_006890976.1| lipoprotein [Geobacter sulfurreducens KN400]
gi|298506099|gb|ADI84822.1| TPR domain lipoprotein [Geobacter sulfurreducens KN400]
Length = 896
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 22/159 (13%)
Query: 67 VARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHA 126
V R P +A A F G++ + G+ +AV+ Y + E +A+ P L +L
Sbjct: 728 VLRNNPNHAPALFAQGMLLEMGGKKREAVTKYRQTLE-----KAESFAPALNNLA----- 777
Query: 127 QCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSI 186
L E G EE L +++ + A + +T G L+K+GR ++
Sbjct: 778 -FLYAEGYGPR-----------EEALRMALTALKQEPANAAIADTYGYALVKNGRAGEAV 825
Query: 187 SVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
+L ++ + P+N +L +AY +GD ++A Q+
Sbjct: 826 KILEKVVKLMPSNPAVRYHLALAYRDTGDRARAATTLQE 864
>gi|399908779|ref|ZP_10777331.1| type IV pilus assembly protein PilF [Halomonas sp. KM-1]
Length = 241
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 23/173 (13%)
Query: 160 QSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 219
Q++ + LG+ L+ L ++S L+ L PN+ + + + I Y + G+ EQ+
Sbjct: 34 QTEANPTEAFTQLGMAYLERDNLPRAMSALNRALERSPNDPEALQAMAIVYQRQGEREQA 93
Query: 220 AKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLL 279
K FQ I ++ A NY A+ L + G V AC E L
Sbjct: 94 DKTFQRAIAAAPDNSRARNNY-AVFLYEQGQV---------RRAC-----------EQLE 132
Query: 280 AALKADPKA--AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
AA + A A ++ NL + G+ + LE+A LEP + + +A
Sbjct: 133 AASQDTRYANRAQLFTNLGQCQWELGEIDQARHSLERARSLEPRNPWSYFTLA 185
>gi|338535852|ref|YP_004669186.1| hypothetical protein LILAB_31135 [Myxococcus fulvus HW-1]
gi|337261948|gb|AEI68108.1| TPR domain-containing protein [Myxococcus fulvus HW-1]
Length = 624
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 83/185 (44%), Gaps = 24/185 (12%)
Query: 137 NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVD 196
+L++ P+ E +L +E + + A +++ L L + GR + ++++L +A
Sbjct: 402 RALERGGAPDRAERLL---REGLATSP-SAALYDALAATLHRQGRGKEALALLREAVARS 457
Query: 197 PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAG 256
P + D + LG A+ + GD + + ++ +H AAL N+ G +LA AG
Sbjct: 458 PRDEDLLYVLGAAHERQGDAAGALARMRAVLAVAPDHAAAL-NF-------LGYLLAQAG 509
Query: 257 ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAA 316
+ E A+ + AL+ P +L Y+ GD+ + LE+A+
Sbjct: 510 QDLDE------------AERRVRRALELRPDTGAYLDSLGWVYFRRGDYARAVDALERAS 557
Query: 317 KLEPN 321
L P+
Sbjct: 558 TLSPD 562
>gi|46581674|ref|YP_012482.1| hypothetical protein DVU3272 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120601167|ref|YP_965567.1| hypothetical protein Dvul_0116 [Desulfovibrio vulgaris DP4]
gi|387154870|ref|YP_005703806.1| hypothetical protein Deval_3027 [Desulfovibrio vulgaris RCH1]
gi|46451097|gb|AAS97742.1| TPR domain protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120561396|gb|ABM27140.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio vulgaris DP4]
gi|311235314|gb|ADP88168.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
vulgaris RCH1]
Length = 207
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%)
Query: 143 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 202
L+ +LE L +E+ QS + V W+ +G + L+ G + +I+ L L P+
Sbjct: 71 LQRGDLEGCLRYNEEAAQSRPKFPVAWSNIGFVHLQRGEPEKAIAALKKALKWQPDFIQA 130
Query: 203 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYA 241
+ +G A++ GD E + I K+ + A N A
Sbjct: 131 MATMGAAFYMEGDYEACINISNEAIKKEPSFGPAYNNLA 169
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 143 LEPEELEEILSKLKESM--QSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNC 200
L+ E E+ ++ LK+++ Q D QA+ T+G G ++ I++ + + +P+
Sbjct: 105 LQRGEPEKAIAALKKALKWQPDFIQAMA--TMGAAFYMEGDYEACINISNEAIKKEPSFG 162
Query: 201 DCIGNLGIAYFQSGDMEQSAKCFQDLILKD 230
NL +AYF+ GD +S K F DL +++
Sbjct: 163 PAYNNLALAYFELGDFAKSVK-FADLAMEN 191
>gi|374575450|ref|ZP_09648546.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Bradyrhizobium sp. WSM471]
gi|374423771|gb|EHR03304.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Bradyrhizobium sp. WSM471]
Length = 746
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 34/74 (45%)
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
LGL GRL+ + +L A+DP + D GNLG YF + + C + I
Sbjct: 63 LGLRAYDGGRLEEAQQLLECATALDPRSPDAHGNLGAVYFNLQKFQDARACQEKAIALKP 122
Query: 232 NHPAALINYAALLL 245
N P AL N LL
Sbjct: 123 NSPIALTNLGNTLL 136
>gi|444732200|gb|ELW72506.1| Transmembrane and TPR repeat-containing protein 1, partial [Tupaia
chinensis]
Length = 856
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 146/348 (41%), Gaps = 74/348 (21%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E+ EE ++ LK+S++ A +++L +L + R + + + + + P++ D N
Sbjct: 536 EKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYLAGIKNCPDSSDLHNN 595
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
G+ SG E++ +Q+ I +H A++N G + G N+
Sbjct: 596 YGVFLVDSGSPEKAVAHYQEAIKLSPSHHVAMVN--------LGRLYRSLGENS------ 641
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 325
+A+E AL+ K A I + L YY TG + + + +AA L+P+
Sbjct: 642 -------MAEEWYKRALQVAHK-AEILSPLGALYYNTGRYEEALQIYREAAALQPSQREL 693
Query: 326 RYAVA-----VSRIKDAER--SQEPTEQLSWAG-----NEMASILREGD----------- 362
R A+A + + K+AE+ S+ +E+ AG +++I + +
Sbjct: 694 RLALAQVLAVMGQTKEAEKMTSRIVSEE---AGCLECYRLLSAIYSKQEQHDQALDAIDK 750
Query: 363 PVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKE 422
+Q++P K V+ F T+ N+L E LD+A E
Sbjct: 751 ALQLKP-----------KDPKVVSELFFTKGNQLR---------EQNLLDKAF------E 784
Query: 423 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMVYCSSNL 470
AA++ +P A W N+ ++ G++ S+ E+ L + S L
Sbjct: 785 SYKAAVELNPDQAQAWMNMGGIQHIKGNYVSARAYYERALQLVPESKL 832
>gi|319790334|ref|YP_004151967.1| hypothetical protein Theam_1363 [Thermovibrio ammonificans HB-1]
gi|317114836|gb|ADU97326.1| Tetratricopeptide TPR_1 repeat-containing protein [Thermovibrio
ammonificans HB-1]
Length = 265
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 43/78 (55%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
E+ L+ L ++ + + ++N LGL LK G L+ + L L + PN + NL
Sbjct: 60 EIPLALNYLYKAKKLEPNDPKIYNALGLAFLKRGDLKRARENLQKALRLKPNFSEAWLNL 119
Query: 207 GIAYFQSGDMEQSAKCFQ 224
G+ Y + G+++++ +C++
Sbjct: 120 GMLYEEEGNLKEARRCYE 137
>gi|322421648|ref|YP_004200871.1| glycosyl transferase family protein [Geobacter sp. M18]
gi|320128035|gb|ADW15595.1| glycosyl transferase family 9 [Geobacter sp. M18]
Length = 991
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 21/185 (11%)
Query: 137 NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVD 196
+ L++ LE +E + +QS+ + G++ +G L+ ++ LS +A+D
Sbjct: 6 SELNRALEENRVERARELCQALLQSEPDSVDLLTLSGVLARLTGELEVALHSLSRAVALD 65
Query: 197 PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAG 256
P+ + NLG+ G E++A C++ + K + +P AL N LL K G
Sbjct: 66 PSQAELHNNLGVILEDLGRHEEAAACYRRALEKRKLYPEALGNLGNALL-KLGH------ 118
Query: 257 ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAA 316
+A+ C A+ DP + + +L +A G+ + +C K
Sbjct: 119 ------------PQEAIARFC--DAIALDPGYTNAYYHLGHALRGQGEWEGAVQCYRKVV 164
Query: 317 KLEPN 321
+L+P+
Sbjct: 165 ELKPD 169
>gi|383319448|ref|YP_005380289.1| TPR repeats containing protein [Methanocella conradii HZ254]
gi|379320818|gb|AFC99770.1| TPR repeats containing protein [Methanocella conradii HZ254]
Length = 1006
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 54/277 (19%), Positives = 111/277 (40%), Gaps = 42/277 (15%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P +A AH+ LGL + G +A+ + +A R + D A +L + + LL
Sbjct: 476 PDDAEAHYNLGLALSKKGSLDQAIREFREA----YRLKPDFAEA-FYNLAVVFGKKGLLD 530
Query: 132 ESSGDNSLDKELEPEE----------------LEEILSKLKESMQSDTRQAVVWNTLGLI 175
++ + L P+ +++ + + +E++ A LGL
Sbjct: 531 DAIREYREAIRLRPDYAEAHYNLAIAYSKKNMVDDAIKEFREAVHLRPDDANAHYNLGLA 590
Query: 176 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 235
L K G L ++I ++ + P++ NL +A + G ++++ K F++ I +
Sbjct: 591 LNKKGLLDNAIREYVEVVRLRPDDAKAHNNLALALYDKGMLDEAVKEFREAIRIKPEY-- 648
Query: 236 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 295
A A+ G LD+ ++ A L A++ P+ + +L
Sbjct: 649 -------------------AEAHYNLGVALDRKGLIDEAIGEYLIAIEMKPEEPNAHYSL 689
Query: 296 ANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 332
A Y G + K ++ L+P+ S R+ + ++
Sbjct: 690 GMALYKKGLLDDAIKEFKEVIWLKPDDFSARFQLGLA 726
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 87/201 (43%), Gaps = 19/201 (9%)
Query: 148 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 207
++ + + +E+++ A N LG++L G + +I + + + P++ + NLG
Sbjct: 257 FDQAIREYREAVRLKPDYAKAHNNLGIVLDYKGMVDEAIKEYRAAVNLKPDDAEAHYNLG 316
Query: 208 IAYFQSGDMEQSAKCFQDLILKDQNHPAA--LINYAALLLCKYGSV-------------- 251
+A +++++ F++ + N+P A + YA LC+ G +
Sbjct: 317 VALTSKNELDEAIHEFKEAVKLKPNYPEAHFKLGYA---LCRKGLLDDAIRELREAIWLR 373
Query: 252 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 311
A A+ G + + ++ A L A++ P A NL AY G + K
Sbjct: 374 PGFAEAHYNLGVVFGKKNMMDDAIRELKDAIRLRPDYAEAHYNLGLAYDYKGQIDDAIKE 433
Query: 312 LEKAAKLEPNCMSTRYAVAVS 332
++A ++ P+ + R + V+
Sbjct: 434 YKEALRIRPDYVKARNNLGVA 454
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 109/278 (39%), Gaps = 38/278 (13%)
Query: 69 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 128
R P + AH+ LG+ G A+ Y ++ LR D AR H++
Sbjct: 99 RLNPDFSEAHYNLGVALDDKGLLDDAIKEYRES----LRLNPDYARA--------HYSLG 146
Query: 129 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 188
+ +L K ++L+E + + KE+++ V +G++L + G + +I
Sbjct: 147 I--------ALGKR---DQLDEAIHEFKEALRLQPDNPEVHYNMGVVLARKGLIDDAIKA 195
Query: 189 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 248
+A+ P++ + NLG++ G ++++ F++ + + A N L L K
Sbjct: 196 FRDAIALKPDDAEAHYNLGVSLDYKGLIDEAISEFRETVWLKPDDAEAHYN-LGLALSKK 254
Query: 249 GSVLAG--------------AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWAN 294
G A A+ G LD V+ A + AA+ P A N
Sbjct: 255 GMFDQAIREYREAVRLKPDYAKAHNNLGIVLDYKGMVDEAIKEYRAAVNLKPDDAEAHYN 314
Query: 295 LANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 332
L A + + ++A KL+PN + + +
Sbjct: 315 LGVALTSKNELDEAIHEFKEAVKLKPNYPEAHFKLGYA 352
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 62 TGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPEL-LSL 120
T L R P +A+ H+ LG++ +G+ A+ Y +A LR + D A+ L +
Sbjct: 806 TELGEALRLKPDDANTHYNLGVVMANMGRFDDAIREYREA----LRIKPDYAKAHNNLGI 861
Query: 121 VQIHHAQCLLPESSGDNSLDKELEPEE----------------LEEILSKLKESMQSDTR 164
V + Q E+ + L+P++ L+E + +LKE+++
Sbjct: 862 VLDYKGQV--DEAIAEYLEAVRLKPDDANAHYNLGLAYDNKGMLDEAIRELKEALRLKPD 919
Query: 165 QAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 209
A LG+IL K G L+ +I + +++ P+ + NLG A
Sbjct: 920 DANAHYNLGVILGKKGLLKEAIDEYNIAVSLRPDYAEAYYNLGFA 964
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 103/261 (39%), Gaps = 44/261 (16%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P A AH+ LG+++ + A+ + A +R D A + H+ L
Sbjct: 374 PGFAEAHYNLGVVFGKKNMMDDAIRELKDA----IRLRPDYA--------EAHYNLGLAY 421
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+ G ++++ + + KE+++ N LG+ L + G L +I
Sbjct: 422 DYKG-----------QIDDAIKEYKEALRIRPDYVKARNNLGVALDEKGFLDDTIREFRE 470
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 251
++ + P++ + NLG+A + G ++Q+ + F++ + A N A +
Sbjct: 471 VVWLKPDDAEAHYNLGLALSKKGSLDQAIREFREAYRLKPDFAEAFYNLAVVF------- 523
Query: 252 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 311
G+ LD A+ +E A++ P A NLA AY + K
Sbjct: 524 --------GKKGLLD--DAIREYRE----AIRLRPDYAEAHYNLAIAYSKKNMVDDAIKE 569
Query: 312 LEKAAKLEPNCMSTRYAVAVS 332
+A L P+ + Y + ++
Sbjct: 570 FREAVHLRPDDANAHYNLGLA 590
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 108/280 (38%), Gaps = 49/280 (17%)
Query: 65 VHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIH 124
V V R P +A AH L L G +AV + +A +R + + A V +
Sbjct: 605 VEVVRLRPDDAKAHNNLALALYDKGMLDEAVKEFREA----IRIKPEYAEAHYNLGVALD 660
Query: 125 HAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQS 184
+ L+ E+ G+ + E++PEE S LG+ L K G L
Sbjct: 661 R-KGLIDEAIGEYLIAIEMKPEEPNAHYS------------------LGMALYKKGLLDD 701
Query: 185 SISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 244
+I ++ + P++ LG+A+ + ++ + + ++ + PA N +L
Sbjct: 702 AIKEFKEVIWLKPDDFSARFQLGLAFNEKNMLDDAIRELREAASMEPGDPAIHYNLGLVL 761
Query: 245 LCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGD 304
G LD A+ K L LK D AH + LA Y G
Sbjct: 762 ---------------GRKGLLD--DAIGEFKAAL--KLKPDDVNAHYYLGLAYNY--KGM 800
Query: 305 HRSSGKCLEKAAKLEPNCMSTRYAVAV-----SRIKDAER 339
+ + L +A +L+P+ +T Y + V R DA R
Sbjct: 801 YDDAATELGEALRLKPDDANTHYNLGVVMANMGRFDDAIR 840
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 66/150 (44%), Gaps = 23/150 (15%)
Query: 72 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 131
P + +AH+ LGL Y G A + +A LR + D A H+ ++
Sbjct: 782 PDDVNAHYYLGLAYNYKGMYDDAATELGEA----LRLKPDDA--------NTHYNLGVVM 829
Query: 132 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 191
+ G ++ + + +E+++ A N LG++L G++ +I+
Sbjct: 830 ANMG-----------RFDDAIREYREALRIKPDYAKAHNNLGIVLDYKGQVDEAIAEYLE 878
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 221
+ + P++ + NLG+AY G ++++ +
Sbjct: 879 AVRLKPDDANAHYNLGLAYDNKGMLDEAIR 908
>gi|403332843|gb|EJY65472.1| hypothetical protein OXYTRI_14373 [Oxytricha trifallax]
gi|403342540|gb|EJY70594.1| hypothetical protein OXYTRI_08544 [Oxytricha trifallax]
Length = 644
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 77/195 (39%), Gaps = 41/195 (21%)
Query: 70 KMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI-------LL----RCEADIARPE-- 116
K P+NA A L+G +YQ Q A+ +++KA EI LL C ++ + E
Sbjct: 380 KNPENAEAWRLMGQLYQENDQDELAILAFKKAYEIDPYDLDSLLCLGVSCTNELEQQEAI 439
Query: 117 --LLSLVQIHHAQCLLPESSGDN-SLDKELEPEE-------------------------L 148
L S ++ H LP DN +LD+ E E
Sbjct: 440 KHLHSYLKYHPEYSQLPNIQSDNLTLDEVHEAYEKAYQLNSKDSNLCLAMGVLAFIRRQF 499
Query: 149 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 208
+E ++ + ++ + +WN G L + + +I V + L + PN + N+G+
Sbjct: 500 QEAITHFQNGIRENPTDHTLWNKYGAALANNTDIDQAIQVYQTALDLRPNYVRTLANIGL 559
Query: 209 AYFQSGDMEQSAKCF 223
A E+S F
Sbjct: 560 AMRNRFKFEESVPYF 574
>gi|346464547|gb|AEO32118.1| hypothetical protein [Amblyomma maculatum]
Length = 491
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 28/187 (14%)
Query: 115 PELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQ---SDTRQAVVWNT 171
P LL V++ Q + E+ DK E ++ E+++ + ++Q S TR V
Sbjct: 141 PRLLKTVEL--LQHFVDEA------DKAYEVQDYEKVIYFMDRALQHAVSSTR-CEVLKA 191
Query: 172 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 231
L LLK RL + + +++ DP N D + G+ ++ ++E++ + FQ ++
Sbjct: 192 ESLALLK--RLTGAREIADNIMRADPTNADAVYVRGLCFYYEDNIEKALQHFQQVLRLAP 249
Query: 232 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 291
+HP A + Y L K N G + A N+ +AL+ DP
Sbjct: 250 DHPKASVAYKRARLLKSKKDEGNEAFNGG-----NYEEAFNI----YTSALEVDPS---- 296
Query: 292 WANLANA 298
NLAN+
Sbjct: 297 -NNLANS 302
>gi|194334458|ref|YP_002016318.1| hypothetical protein Paes_1653 [Prosthecochloris aestuarii DSM 271]
gi|194312276|gb|ACF46671.1| TPR repeat-containing protein [Prosthecochloris aestuarii DSM 271]
Length = 466
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 84/225 (37%), Gaps = 35/225 (15%)
Query: 152 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 211
L +L + T + + GLIL K R + L L ++P + L
Sbjct: 123 LEELDNMVTDSTLEKETFFYRGLILQKLERYPEAEKNLEKCLDMEPAFTEAWYELAYCKD 182
Query: 212 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 271
G +E+SAKC+ + I +D + A N G L +
Sbjct: 183 LLGKLEESAKCYLEAIDQDPYNVNAWYN---------------------RGLVLSKLKRY 221
Query: 272 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 331
+ A EC AL + W N AN +TG + +C K + EPN ++ Y +A+
Sbjct: 222 DEALECYDMALAIADDFSSAWYNKANVLAITGMIEDAAECYRKTIEFEPNDINALYNLAI 281
Query: 332 SRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFA 376
+ E EQ A + + V+I+P A A FA
Sbjct: 282 AY--------EELEQYDEAISHYSRC------VEIKPDFADAWFA 312
>gi|116620339|ref|YP_822495.1| hypothetical protein Acid_1216 [Candidatus Solibacter usitatus
Ellin6076]
gi|116223501|gb|ABJ82210.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 761
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 78/193 (40%), Gaps = 24/193 (12%)
Query: 58 SSLKTGLVHVA--------RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCE 109
+SL++G VA K P +A H L+G Y R G A +Y++A +LR
Sbjct: 552 TSLESGHYDVAIEQAGRLLSKYPDSARLHLLVGKAYFRKGDLAGATRAYQRAS--VLRPS 609
Query: 110 ADIARPELLSLVQIH-----------HAQCLLPESSGDNSLDKELEPEE---LEEILSKL 155
A L S + H L P+ G + L E L+E LS
Sbjct: 610 DPAAVNALASTYAVQGQASQAMEAYRHVLKLNPDDWGAMNNLAFLIAENNGSLDEALSLS 669
Query: 156 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 215
++ +TLG I +K G S+I + L DP N +LG A Q GD
Sbjct: 670 SRVIRKFPNVPDFNDTLGWIYVKKGMSDSAIPMFRKLARQDPQNATYRYHLGKALVQKGD 729
Query: 216 MEQSAKCFQDLIL 228
+ +A+ FQ +L
Sbjct: 730 PKSAAEQFQHALL 742
>gi|410614720|ref|ZP_11325759.1| hypothetical protein GPSY_4037 [Glaciecola psychrophila 170]
gi|410165718|dbj|GAC39648.1| hypothetical protein GPSY_4037 [Glaciecola psychrophila 170]
Length = 616
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 36/181 (19%)
Query: 170 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 229
N LG++ ++ + ++ VL LA++ + NLG+AY + +++ K F ++
Sbjct: 43 NLLGVVFIQIQQADQAVLVLEKALAINNKDAQTYNNLGLAYKELHQFKKAQKAFNSSLIL 102
Query: 230 DQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNV-AKECLL--------- 279
+ P L N G++LA + D+A ++ ECL
Sbjct: 103 NPQQPQILNN--------LGNILAAQDQHKQATLVFDKALKLDANYPECLSNFAQSLKEL 154
Query: 280 ----AALKADPKAAHIWANLANAYYLT---------GDHRSSGKCLEKAAKLE---PNCM 323
AL+A A H+ N N+YYL D+ S+ K EKA ++ P C+
Sbjct: 155 GNLEIALRAIEHANHLEPN--NSYYLNVIGEIQLAKVDYESAKKTFEKAMAIDNYMPACI 212
Query: 324 S 324
+
Sbjct: 213 N 213
>gi|400756581|ref|NP_953036.2| lipoprotein [Geobacter sulfurreducens PCA]
gi|399107892|gb|AAR35363.2| TPR domain lipoprotein [Geobacter sulfurreducens PCA]
Length = 896
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 22/159 (13%)
Query: 67 VARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHA 126
V R P +A A F G++ + G+ +AV+ Y + E +A+ P L +L
Sbjct: 728 VLRNNPNHAPALFAQGMLLEMGGKKREAVTKYRQTLE-----KAESFAPALNNLA----- 777
Query: 127 QCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSI 186
L E G EE L +++ + A + +T G L+K+GR ++
Sbjct: 778 -FLYAEGYGPR-----------EEALRMALTALKQEPANAAIADTYGYALVKNGRAGEAV 825
Query: 187 SVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 225
+L ++ + P+N +L +AY +GD ++A Q+
Sbjct: 826 KILEKVVKLMPSNPAVRYHLALAYRDTGDRARAATTLQE 864
>gi|359461418|ref|ZP_09249981.1| TPR domain-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 784
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 78/189 (41%), Gaps = 23/189 (12%)
Query: 71 MPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLL 130
+P A+F G Y++ G+ +A+ Y +A I C ++ ++ +
Sbjct: 94 LPDYDEAYFQRGNSYRQRGEFQRAIQDYSQAIRINPYC------------IKAYYKRA-- 139
Query: 131 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 190
D E + L+ + + + A + G+ L +SG L+ +I +
Sbjct: 140 ---------DSRAELGDHPGALTDFSQVILRLPKDANAYCQRGMFLSQSGELEKAIEDFT 190
Query: 191 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 250
S + +P D + G Q G+ E+++K F + +L D NH AA AL + K
Sbjct: 191 SAIEHNPRLADAYFHRGYCLAQMGEAEKASKDFSEALLHDPNHQAAYTRAYALGMLKEAP 250
Query: 251 VLAGAGANT 259
V + ++T
Sbjct: 251 VDVSSPSST 259
>gi|333982415|ref|YP_004511625.1| hypothetical protein [Methylomonas methanica MC09]
gi|333806456|gb|AEF99125.1| Tetratricopeptide TPR_2 repeat-containing protein [Methylomonas
methanica MC09]
Length = 789
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+L++ L ++ +++ D+ AV W++ G LLK GRL +IS L + +DP + NL
Sbjct: 614 DLQKALVYIERALKIDSSSAVNWSSKGYALLKLGRLPEAISTLETATNLDPQFANAWINL 673
Query: 207 GIAYFQSGDM 216
G A +S ++
Sbjct: 674 GEAQMRSNNL 683
>gi|194668362|ref|XP_613739.4| PREDICTED: tetratricopeptide repeat protein 37 [Bos taurus]
Length = 1545
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 134 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL--GLILLKSGRLQSSISVLSS 191
SG ++D +E EE+E L+ L Q + W L GL LK+G+ +++ L +
Sbjct: 530 SGAAAVDLSVELEEMETALAILTTVTQKASAGTAKWAWLRRGLYYLKAGQHSQAVADLQA 589
Query: 192 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 223
L DP + +C +LG AY G + K F
Sbjct: 590 ALRADPKDFNCWESLGEAYLSRGGYTTALKSF 621
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 278 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
L AAL+ADPK + W +L AY G + ++ K KA++L P + + VA
Sbjct: 587 LQAALRADPKDFNCWESLGEAYLSRGGYTTALKSFTKASELNPESTYSVFKVA 639
>gi|357039147|ref|ZP_09100942.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfotomaculum
gibsoniae DSM 7213]
gi|355358611|gb|EHG06377.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfotomaculum
gibsoniae DSM 7213]
Length = 208
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 25/175 (14%)
Query: 146 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 205
E +EE ++ L E+ + Q LG+ L++ G+L +I+ +A + N
Sbjct: 9 EFIEEQINMLNENPECANAQY----NLGVSLMQQGKLNEAINFFEEAIANSGRMFEACVN 64
Query: 206 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 265
LG YF+ GD+E+ + + + + P YA +G
Sbjct: 65 LGYIYFKLGDLEKVVEANKKAV---EIEPRYARGYA------------------NQGFAY 103
Query: 266 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 320
Q S + A E L A++ +P+ W+NL NAY D + EK + P
Sbjct: 104 LQMSKTDEAIEALNEAIELNPEIVQAWSNLINAYIQKDDLDKAIATGEKLVEFAP 158
>gi|418677963|ref|ZP_13239237.1| tetratricopeptide repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|400321153|gb|EJO69013.1| tetratricopeptide repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
Length = 1197
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/169 (17%), Positives = 72/169 (42%), Gaps = 23/169 (13%)
Query: 53 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 112
R+ ++ +TG + K P + ++H+ +G+++ + + ++ +++++ L D
Sbjct: 688 RKGEIDKAETGFKEILTKKPDSYYSHYQMGIIHLQRKKYEASIDAFDRS----LLLNKDF 743
Query: 113 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 172
+ + ++H SG+ L KE + + + Q D + +
Sbjct: 744 VAARIGKGISLYH--------SGNKKLAKE-----------EFEAATQQDAANELAPYNI 784
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 221
G+IL +I + ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAIGIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|428182577|gb|EKX51437.1| hypothetical protein GUITHDRAFT_66029 [Guillardia theta CCMP2712]
Length = 682
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 69/176 (39%), Gaps = 33/176 (18%)
Query: 155 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNN------CDCIGNLGI 208
++ +D A W G G Q +I L+ ++ P++ CD GI
Sbjct: 12 FSRAVDADPNVADAWKRRGQTRAALGFDQEAIKDLTKAASLSPDHEYAYLTCDFFFQRGI 71
Query: 209 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 268
Y + D ++ F+ + D + P I + + LC+
Sbjct: 72 VYHKMMDFRKALTDFRKALNIDGSSP---ITWNFVGLCE--------------------- 107
Query: 269 SAVNVAKECLLA---ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
+++ +E ++A A + DP WANL AY GD +++ K A KL+PN
Sbjct: 108 NSLGRTREAIIAYERATQLDPNMKEAWANLGQAYRDAGDRQNAEKYFAMAEKLDPN 163
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 147 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 206
+ + L+ ++++ D + WN +GL GR + +I +DPN + NL
Sbjct: 78 DFRKALTDFRKALNIDGSSPITWNFVGLCENSLGRTREAIIAYERATQLDPNMKEAWANL 137
Query: 207 GIAYFQSGDMEQSAKCF 223
G AY +GD + + K F
Sbjct: 138 GQAYRDAGDRQNAEKYF 154
>gi|421088464|ref|ZP_15549289.1| tetratricopeptide repeat protein [Leptospira kirschneri str.
200802841]
gi|410003095|gb|EKO53544.1| tetratricopeptide repeat protein [Leptospira kirschneri str.
200802841]
Length = 1197
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/169 (17%), Positives = 72/169 (42%), Gaps = 23/169 (13%)
Query: 53 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 112
R+ ++ +TG + K P + ++H+ +G+++ + + ++ +++++ L D
Sbjct: 688 RKGEIDKAETGFKEILTKKPDSYYSHYQMGIIHLQRKKYEASIDAFDRS----LLLNKDF 743
Query: 113 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 172
+ + ++H SG+ L KE + + + Q D + +
Sbjct: 744 VAARIGKGISLYH--------SGNKKLAKE-----------EFEAATQQDAANELAPYNI 784
Query: 173 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 221
G+IL +I + ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAIGIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|291221465|ref|XP_002730742.1| PREDICTED: tetratricopeptide repeat domain 37-like [Saccoglossus
kowalevskii]
Length = 1566
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 16/152 (10%)
Query: 195 VDPNNCDCIGNLGIAYFQ-SGDMEQSAKCFQ---DLILKDQNHPAALINYAALL------ 244
+DP + D LG Y +GD++++ +C+Q DL ++ AAL + L
Sbjct: 495 LDPYHSDTFLYLGYYYENVTGDIKKAKRCYQKSFDLDRRNDEAGAALGDALISLDEQESA 554
Query: 245 LCKYGSVLAGAGANTGEGACLD------QASAVNVAKECLLAALKADPKAAHIWANLANA 298
L Y SV + A A + + A L + + A L AL+ADPK W LA A
Sbjct: 555 LQLYTSVTSRASAGSAKWAWLRLGLYQLKKQEYSQAISSLQCALRADPKDVCCWECLAEA 614
Query: 299 YYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 330
Y G + ++ + KAA+L+ + + + +A
Sbjct: 615 YMSRGSYTAALRAFTKAAELDDSSIYCHFQIA 646
>gi|434394736|ref|YP_007129683.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
gi|428266577|gb|AFZ32523.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
Length = 294
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 90/229 (39%), Gaps = 26/229 (11%)
Query: 117 LLSLVQIHHAQCLLPESSGDNS--LDKE-----------LEPEELEEILSKLKESMQSDT 163
LL + Q Q L+P + NS L+++ + ++ E+ L + + + Q
Sbjct: 16 LLGVAQPALGQALIPRAPQLNSAALEQQGLRLAQEAAQLAQFQQYEQALPRARLATQLAP 75
Query: 164 RQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 223
R W LG + L++ R +I+ L +DP N + LG A+FQ G + +
Sbjct: 76 RSYQSWFLLGGLYLQTNRYNEAIAALDQARVLDPKNASIMFALGSAHFQQGKYQAAVDTL 135
Query: 224 QDLILKDQNHPAALINY--AALLLCKYGSVLAGAGANTGE-----------GACLDQASA 270
Q + N P L + A L ++ + T G +
Sbjct: 136 QAGLRLKPNDPEGLFDLGNAYYKLRQFPQAIEQYNKATAADKKFWPAINNIGLIKYEQGD 195
Query: 271 VNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLE 319
+N A + AAL D +AA +A A Y GD + + E A +++
Sbjct: 196 INSALKHWQAALNIDKQAAEPQLAMAVALYTRGDQQRAIAMGEAALRID 244
>gi|158333792|ref|YP_001514964.1| hypothetical protein AM1_0600 [Acaryochloris marina MBIC11017]
gi|158304033|gb|ABW25650.1| TPR repeat-containing protein [Acaryochloris marina MBIC11017]
Length = 367
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 114/293 (38%), Gaps = 46/293 (15%)
Query: 73 KNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPE 132
KNA+ H+ LG LGQ +A ++Y+K E+ ++ E L+++
Sbjct: 109 KNANFHYALGYSLGNLGQNDQAAAAYQKVIEL---EPKNVRAYEGLAVIYSRQ------- 158
Query: 133 SSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSL 192
++ +E ++ ++ + + +N++GLI LK +++ +++ L
Sbjct: 159 -------------QKYDEAFQNFQKVIEINPKNGGAYNSIGLIHLKRNQVEPAVTNLEKA 205
Query: 193 LAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVL 252
+ P N + NL +AY G E+ + D +P + + G +L
Sbjct: 206 ATLSPKNGEIQMNLALAYAAQGKTEEGLVALDKAVKLDPRNPK--------VHLRTGQLL 257
Query: 253 AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 312
G N A+ K+ AL+ D L + GD +
Sbjct: 258 QSQGNNE---------RAITAYKQ----ALRHDKNLGAAHEGLGDVLMQKGDALGAVVAF 304
Query: 313 EKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQ 365
+A KLE S Y +A + I R +E +L A ++ + R+ D V+
Sbjct: 305 RQATKLEKRNPSAFYKLAKALIAR-NRHREAIPELHKA-RQLYQLQRQADGVK 355
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 75/197 (38%), Gaps = 20/197 (10%)
Query: 141 KEL-EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNN 199
KEL E +L+ L +++ DT+ +++ +G I + S+ +A+D N
Sbjct: 51 KELVEANDLDMALQAYRQATLLDTKNPRIFSAIGYIQAQRKDFARSVEAYKKAIALDGKN 110
Query: 200 CDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLC-----KYGSVL-- 252
+ LG + G +Q+A +Q +I + P + Y L + KY
Sbjct: 111 ANFHYALGYSLGNLGQNDQAAAAYQKVI---ELEPKNVRAYEGLAVIYSRQQKYDEAFQN 167
Query: 253 ---------AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTG 303
GA G + + V A L A PK I NLA AY G
Sbjct: 168 FQKVIEINPKNGGAYNSIGLIHLKRNQVEPAVTNLEKAATLSPKNGEIQMNLALAYAAQG 227
Query: 304 DHRSSGKCLEKAAKLEP 320
L+KA KL+P
Sbjct: 228 KTEEGLVALDKAVKLDP 244
>gi|428211029|ref|YP_007084173.1| hypothetical protein Oscil6304_0507 [Oscillatoria acuminata PCC
6304]
gi|427999410|gb|AFY80253.1| tetratricopeptide repeat protein [Oscillatoria acuminata PCC 6304]
Length = 247
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 144 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 203
+ +E +E ++ +E+++ + +G IL+ G LQ +IS + ++PN +
Sbjct: 137 QQQEFDEAIAAYEEAIRLQPNYDKAYYNMGNILVTRGELQDAISAYQKAIEINPNFAEAY 196
Query: 204 GNLGIAYFQSGDMEQSAKCFQ---DLILKDQNHPA 235
GNLG+ + G+ ++ + Q DL + N A
Sbjct: 197 GNLGMILSEGGNQTEATQVLQTARDLFQRQGNFSA 231
>gi|344199655|ref|YP_004783981.1| type IV pilus biogenesis/stability protein PilW [Acidithiobacillus
ferrivorans SS3]
gi|343775099|gb|AEM47655.1| type IV pilus biogenesis/stability protein PilW [Acidithiobacillus
ferrivorans SS3]
Length = 281
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 19/161 (11%)
Query: 161 SDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSA 220
+D +A ++ LG L+ G + +I L +A + N D +G+AY Q +
Sbjct: 57 TDKAKAGIYTFLGSAYLQDGHPRQAIRELQLAIADNVNYADAYNIMGLAYEQLQQNALAR 116
Query: 221 KCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLA 280
F+ + +D +P L NY A L+ N+G A A+ K
Sbjct: 117 NAFRRALSRDAKNPEYLNNYGAFLV------------NSGS-----YAEAIVELKRATAD 159
Query: 281 ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 321
L + P+ A W NLA AY D ++ L +A L PN
Sbjct: 160 PLYSTPQFA--WTNLAQAYAGLKDLPAARDALNRALYLVPN 198
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.128 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,855,950,600
Number of Sequences: 23463169
Number of extensions: 264249740
Number of successful extensions: 755026
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1935
Number of HSP's successfully gapped in prelim test: 3359
Number of HSP's that attempted gapping in prelim test: 719567
Number of HSP's gapped (non-prelim): 29751
length of query: 470
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 324
effective length of database: 8,933,572,693
effective search space: 2894477552532
effective search space used: 2894477552532
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 79 (35.0 bits)