Query 012151
Match_columns 470
No_of_seqs 132 out of 1184
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 03:46:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012151.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012151hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 3.6E-69 1.2E-73 538.8 36.2 441 10-469 8-454 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 3.4E-64 1.2E-68 512.7 38.6 445 15-470 8-480 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 1E-61 3.5E-66 492.9 45.9 445 10-469 1-469 (480)
4 2c1x_A UDP-glucose flavonoid 3 100.0 5.1E-61 1.8E-65 484.7 35.7 437 15-469 7-452 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 1.7E-58 5.8E-63 467.5 39.3 429 14-468 8-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 9.4E-46 3.2E-50 372.0 32.5 399 15-468 12-421 (424)
7 4amg_A Snogd; transferase, pol 100.0 3.4E-44 1.2E-48 357.7 28.8 359 14-465 21-397 (400)
8 1iir_A Glycosyltransferase GTF 100.0 3.1E-43 1.1E-47 352.5 26.6 380 16-468 1-400 (415)
9 3rsc_A CALG2; TDP, enediyne, s 100.0 4.3E-41 1.5E-45 337.0 31.5 385 14-469 19-414 (415)
10 1rrv_A Glycosyltransferase GTF 100.0 5E-42 1.7E-46 343.9 22.4 374 16-463 1-395 (416)
11 3ia7_A CALG4; glycosysltransfe 100.0 5.1E-40 1.7E-44 327.6 31.9 375 16-468 5-398 (402)
12 3h4t_A Glycosyltransferase GTF 100.0 1E-40 3.5E-45 332.8 22.9 374 16-468 1-382 (404)
13 2yjn_A ERYCIII, glycosyltransf 100.0 2.9E-39 1E-43 326.3 29.9 372 14-468 19-435 (441)
14 2iyf_A OLED, oleandomycin glyc 100.0 8.6E-39 2.9E-43 321.8 31.2 378 16-467 8-398 (430)
15 2p6p_A Glycosyl transferase; X 100.0 1E-38 3.5E-43 316.5 29.3 356 16-468 1-379 (384)
16 3oti_A CALG3; calicheamicin, T 100.0 3.7E-36 1.3E-40 299.5 27.4 352 14-467 19-396 (398)
17 4fzr_A SSFS6; structural genom 100.0 3.8E-37 1.3E-41 306.6 19.2 358 14-463 14-395 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 6.4E-35 2.2E-39 289.8 26.1 355 15-467 1-387 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 4.1E-32 1.4E-36 271.4 31.7 361 14-468 19-408 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 2.6E-28 8.8E-33 239.5 24.8 317 17-448 4-337 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 3.3E-27 1.1E-31 206.0 14.7 163 265-448 6-170 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 2.4E-20 8.1E-25 182.8 24.0 332 16-469 7-356 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.6 1.7E-14 5.9E-19 134.5 20.6 116 282-412 156-274 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 9.1E-16 3.1E-20 137.3 9.1 132 280-426 25-196 (224)
25 3okp_A GDP-mannose-dependent a 99.4 1.7E-11 5.9E-16 120.6 24.0 342 15-470 4-379 (394)
26 3c48_A Predicted glycosyltrans 99.4 2.4E-10 8.3E-15 114.2 27.9 354 14-445 19-408 (438)
27 3fro_A GLGA glycogen synthase; 99.3 9.8E-10 3.4E-14 109.5 29.9 385 14-469 1-429 (439)
28 1vgv_A UDP-N-acetylglucosamine 99.3 1.9E-11 6.5E-16 120.1 15.4 161 282-468 204-374 (384)
29 2jjm_A Glycosyl transferase, g 99.3 3.5E-09 1.2E-13 104.3 30.7 351 7-469 11-384 (394)
30 2gek_A Phosphatidylinositol ma 99.3 6.5E-10 2.2E-14 109.8 25.3 339 14-468 19-381 (406)
31 2r60_A Glycosyl transferase, g 99.3 2.7E-09 9.4E-14 108.6 28.7 134 285-429 263-424 (499)
32 1v4v_A UDP-N-acetylglucosamine 99.3 6.5E-11 2.2E-15 116.0 15.4 134 282-438 197-340 (376)
33 3dzc_A UDP-N-acetylglucosamine 99.3 1.2E-10 4.1E-15 114.9 16.7 159 281-469 228-396 (396)
34 3ot5_A UDP-N-acetylglucosamine 99.2 2.1E-10 7.3E-15 113.3 17.2 160 281-466 222-391 (403)
35 2iw1_A Lipopolysaccharide core 99.2 2.2E-08 7.4E-13 97.6 30.0 131 283-429 195-337 (374)
36 3beo_A UDP-N-acetylglucosamine 99.2 1.4E-09 4.8E-14 106.2 21.0 162 282-467 204-373 (375)
37 2iuy_A Avigt4, glycosyltransfe 99.2 1.8E-09 6E-14 104.2 19.2 125 286-428 164-307 (342)
38 2x6q_A Trehalose-synthase TRET 99.0 2.5E-07 8.6E-12 91.5 27.8 110 343-469 293-413 (416)
39 4hwg_A UDP-N-acetylglucosamine 98.9 8.6E-09 2.9E-13 100.9 11.7 313 18-429 12-342 (385)
40 3oy2_A Glycosyltransferase B73 98.8 6.9E-07 2.3E-11 88.3 23.4 166 283-469 183-389 (413)
41 3s28_A Sucrose synthase 1; gly 98.8 8.7E-07 3E-11 94.2 24.3 168 284-468 572-767 (816)
42 1rzu_A Glycogen synthase 1; gl 98.6 1E-06 3.5E-11 89.1 16.9 159 285-468 292-473 (485)
43 2vsy_A XCC0866; transferase, g 98.6 1.9E-05 6.5E-10 81.4 26.7 115 343-468 434-557 (568)
44 2f9f_A First mannosyl transfer 98.6 1.3E-07 4.5E-12 81.9 8.4 139 285-443 24-174 (177)
45 2qzs_A Glycogen synthase; glyc 98.5 4.9E-06 1.7E-10 84.0 19.8 160 284-468 292-474 (485)
46 2hy7_A Glucuronosyltransferase 98.3 6.3E-05 2.2E-09 74.1 21.6 73 343-429 265-352 (406)
47 2xci_A KDO-transferase, 3-deox 98.2 0.00026 9E-09 68.8 22.8 96 345-447 262-364 (374)
48 4gyw_A UDP-N-acetylglucosamine 97.8 0.0004 1.4E-08 73.4 16.8 171 281-469 520-704 (723)
49 3qhp_A Type 1 capsular polysac 97.8 9.4E-05 3.2E-09 62.6 9.3 126 284-429 2-140 (166)
50 2bfw_A GLGA glycogen synthase; 97.7 0.00065 2.2E-08 59.3 13.1 77 344-429 96-181 (200)
51 3q3e_A HMW1C-like glycosyltran 97.6 0.0007 2.4E-08 68.9 13.5 144 283-438 440-594 (631)
52 3rhz_A GTF3, nucleotide sugar 97.3 0.00039 1.3E-08 66.4 7.2 111 344-467 215-337 (339)
53 3tov_A Glycosyl transferase fa 97.2 0.016 5.3E-07 55.5 17.1 104 15-148 8-115 (349)
54 1psw_A ADP-heptose LPS heptosy 97.1 0.011 3.7E-07 56.4 15.5 103 16-148 1-106 (348)
55 3vue_A GBSS-I, granule-bound s 96.0 0.033 1.1E-06 56.6 10.7 131 284-428 327-476 (536)
56 1uqt_A Alpha, alpha-trehalose- 95.3 0.14 4.7E-06 51.2 12.2 105 348-469 337-453 (482)
57 2x0d_A WSAF; GT4 family, trans 95.3 0.032 1.1E-06 54.6 7.4 84 343-438 295-385 (413)
58 3t5t_A Putative glycosyltransf 93.6 0.48 1.6E-05 47.1 11.4 109 344-468 353-471 (496)
59 3ty2_A 5'-nucleotidase SURE; s 92.6 0.52 1.8E-05 42.3 8.9 48 10-59 6-53 (261)
60 3nb0_A Glycogen [starch] synth 91.0 0.93 3.2E-05 46.7 9.8 46 343-390 490-551 (725)
61 2phj_A 5'-nucleotidase SURE; S 90.3 3.2 0.00011 37.0 11.6 42 16-59 2-43 (251)
62 1j9j_A Stationary phase surviV 87.0 4.7 0.00016 35.9 10.4 42 16-59 1-42 (247)
63 3vue_A GBSS-I, granule-bound s 86.2 0.51 1.7E-05 47.8 4.1 37 14-52 8-52 (536)
64 2e6c_A 5'-nucleotidase SURE; S 86.2 10 0.00034 33.7 12.1 112 16-151 1-129 (244)
65 4b4k_A N5-carboxyaminoimidazol 85.0 16 0.00053 30.5 12.3 141 283-452 22-176 (181)
66 1l5x_A SurviVal protein E; str 84.7 6.9 0.00024 35.5 10.4 42 16-59 1-42 (280)
67 2x0d_A WSAF; GT4 family, trans 84.3 0.43 1.5E-05 46.5 2.5 40 14-53 45-89 (413)
68 1xmp_A PURE, phosphoribosylami 83.2 18 0.00062 29.8 12.6 141 283-452 11-165 (170)
69 2wqk_A 5'-nucleotidase SURE; S 83.2 3.2 0.00011 37.2 7.5 41 17-59 3-43 (251)
70 2v4n_A Multifunctional protein 82.8 8.1 0.00028 34.5 9.9 42 16-59 2-43 (254)
71 1o4v_A Phosphoribosylaminoimid 80.7 24 0.00081 29.5 13.1 139 284-451 14-164 (183)
72 4dzz_A Plasmid partitioning pr 80.4 6.3 0.00022 33.5 8.4 76 23-132 10-85 (206)
73 2gt1_A Lipopolysaccharide hept 79.5 3.5 0.00012 38.3 6.8 44 16-59 1-46 (326)
74 2gt1_A Lipopolysaccharide hept 78.5 1.2 4E-05 41.7 3.1 130 282-429 177-322 (326)
75 1u11_A PURE (N5-carboxyaminoim 77.3 30 0.001 28.8 11.6 140 284-452 22-175 (182)
76 1g5t_A COB(I)alamin adenosyltr 76.8 11 0.00039 32.1 8.5 98 14-132 27-130 (196)
77 3lp6_A Phosphoribosylaminoimid 75.4 34 0.0011 28.4 11.0 138 283-449 7-156 (174)
78 3rg8_A Phosphoribosylaminoimid 74.9 15 0.00052 30.0 8.3 136 284-449 3-149 (159)
79 1kjn_A MTH0777; hypotethical p 72.5 5.5 0.00019 32.0 4.9 46 14-59 5-52 (157)
80 4grd_A N5-CAIR mutase, phospho 71.6 42 0.0014 27.7 11.1 141 282-451 11-165 (173)
81 3kuu_A Phosphoribosylaminoimid 70.3 45 0.0015 27.6 11.3 141 284-453 13-167 (174)
82 3l7i_A Teichoic acid biosynthe 68.1 4.7 0.00016 42.3 5.0 109 349-468 605-719 (729)
83 3qjg_A Epidermin biosynthesis 67.5 7.6 0.00026 32.5 5.2 42 17-59 7-48 (175)
84 3bfv_A CAPA1, CAPB2, membrane 65.5 46 0.0016 29.8 10.5 41 15-55 81-123 (271)
85 3zqu_A Probable aromatic acid 64.2 11 0.00036 32.7 5.6 44 15-59 4-47 (209)
86 2q5c_A NTRC family transcripti 63.5 23 0.00079 30.1 7.6 31 360-391 50-80 (196)
87 4b4o_A Epimerase family protei 63.5 6.6 0.00023 35.7 4.5 32 16-51 1-32 (298)
88 3bgw_A DNAB-like replicative h 63.2 12 0.0004 36.6 6.4 41 16-56 198-238 (444)
89 4a1f_A DNAB helicase, replicat 62.7 3.8 0.00013 38.5 2.7 41 17-57 48-88 (338)
90 3ors_A N5-carboxyaminoimidazol 61.8 65 0.0022 26.3 10.9 138 284-450 4-155 (163)
91 3dfz_A SIRC, precorrin-2 dehyd 61.8 59 0.002 28.2 10.0 148 276-449 26-186 (223)
92 3oow_A Phosphoribosylaminoimid 61.4 66 0.0023 26.4 12.6 141 284-453 6-160 (166)
93 2q5c_A NTRC family transcripti 61.1 31 0.0011 29.3 8.0 42 99-152 128-169 (196)
94 3trh_A Phosphoribosylaminoimid 60.6 70 0.0024 26.3 12.0 137 284-449 7-157 (169)
95 3lqk_A Dipicolinate synthase s 60.4 14 0.00047 31.7 5.6 44 15-59 7-51 (201)
96 3q0i_A Methionyl-tRNA formyltr 60.3 61 0.0021 29.9 10.4 37 9-52 3-39 (318)
97 3vot_A L-amino acid ligase, BL 59.8 53 0.0018 31.4 10.6 34 14-52 4-37 (425)
98 2iz6_A Molybdenum cofactor car 58.4 51 0.0017 27.4 8.7 77 347-428 93-173 (176)
99 1ccw_A Protein (glutamate muta 57.2 14 0.00048 29.3 4.9 38 15-52 3-40 (137)
100 1g63_A Epidermin modifying enz 56.8 10 0.00035 31.9 4.1 43 17-60 4-46 (181)
101 2i2c_A Probable inorganic poly 56.4 6.1 0.00021 35.8 2.9 52 362-429 36-93 (272)
102 3cio_A ETK, tyrosine-protein k 56.3 85 0.0029 28.5 10.7 39 16-54 104-144 (299)
103 2ywx_A Phosphoribosylaminoimid 56.2 80 0.0027 25.6 12.4 132 286-449 2-144 (157)
104 2g1u_A Hypothetical protein TM 55.8 13 0.00043 30.1 4.5 42 6-52 9-51 (155)
105 1fmt_A Methionyl-tRNA FMet for 55.6 67 0.0023 29.5 9.8 34 14-52 2-35 (314)
106 2bw0_A 10-FTHFDH, 10-formyltet 55.4 28 0.00096 32.4 7.2 104 15-152 22-130 (329)
107 1sbz_A Probable aromatic acid 55.4 15 0.00051 31.4 4.9 43 16-59 1-44 (197)
108 1mvl_A PPC decarboxylase athal 55.3 17 0.00057 31.4 5.3 45 14-60 18-62 (209)
109 2h31_A Multifunctional protein 55.3 63 0.0022 31.1 9.7 138 283-449 265-412 (425)
110 2yxb_A Coenzyme B12-dependent 55.1 9.8 0.00034 31.3 3.7 39 14-52 17-55 (161)
111 3io3_A DEHA2D07832P; chaperone 54.7 22 0.00075 33.4 6.5 40 15-54 17-59 (348)
112 1y80_A Predicted cobalamin bin 53.8 15 0.0005 31.7 4.8 38 15-52 88-125 (210)
113 2i2x_B MTAC, methyltransferase 53.8 19 0.00064 32.2 5.6 40 14-53 122-161 (258)
114 3auf_A Glycinamide ribonucleot 53.7 77 0.0026 27.6 9.5 107 15-152 22-132 (229)
115 3mcu_A Dipicolinate synthase, 52.3 15 0.00053 31.6 4.5 41 15-56 5-46 (207)
116 3iqw_A Tail-anchored protein t 52.1 39 0.0013 31.4 7.7 41 15-55 15-56 (334)
117 2ywr_A Phosphoribosylglycinami 52.0 42 0.0014 29.0 7.4 106 16-152 2-111 (216)
118 3pdi_B Nitrogenase MOFE cofact 50.7 97 0.0033 30.2 10.7 87 15-149 313-399 (458)
119 1qkk_A DCTD, C4-dicarboxylate 50.3 41 0.0014 26.5 6.8 62 380-446 74-135 (155)
120 2q6t_A DNAB replication FORK h 49.7 25 0.00084 34.3 6.2 41 16-56 201-242 (444)
121 3l4e_A Uncharacterized peptida 48.1 34 0.0011 29.4 6.1 45 273-317 18-62 (206)
122 3ug7_A Arsenical pump-driving 47.9 62 0.0021 30.2 8.5 38 17-54 27-65 (349)
123 2lnd_A De novo designed protei 47.6 19 0.00064 25.3 3.4 49 379-428 49-100 (112)
124 3la6_A Tyrosine-protein kinase 47.4 88 0.003 28.2 9.2 39 17-55 93-133 (286)
125 2r8r_A Sensor protein; KDPD, P 47.2 24 0.00083 30.8 5.0 39 15-53 6-44 (228)
126 2gk4_A Conserved hypothetical 46.9 54 0.0018 28.7 7.2 26 26-53 28-53 (232)
127 1id1_A Putative potassium chan 46.9 16 0.00054 29.4 3.7 32 16-52 4-35 (153)
128 2pju_A Propionate catabolism o 46.8 22 0.00076 31.0 4.8 29 362-391 64-92 (225)
129 3mc3_A DSRE/DSRF-like family p 46.2 35 0.0012 26.8 5.5 43 16-58 16-61 (134)
130 3qvl_A Putative hydantoin race 45.4 1.1E+02 0.0038 26.8 9.3 94 16-149 2-97 (245)
131 1yt5_A Inorganic polyphosphate 44.5 13 0.00043 33.4 2.9 51 363-429 43-96 (258)
132 3ezx_A MMCP 1, monomethylamine 43.5 28 0.00095 30.1 4.9 41 14-54 91-131 (215)
133 1qzu_A Hypothetical protein MD 43.2 21 0.00071 30.7 3.9 45 15-60 19-64 (206)
134 3igf_A ALL4481 protein; two-do 42.2 35 0.0012 32.4 5.7 35 17-51 3-38 (374)
135 1z82_A Glycerol-3-phosphate de 42.2 19 0.00064 33.5 3.9 37 6-51 9-45 (335)
136 3rfo_A Methionyl-tRNA formyltr 41.8 2.1E+02 0.0071 26.2 10.9 34 15-53 4-37 (317)
137 3av3_A Phosphoribosylglycinami 41.1 1.1E+02 0.0036 26.3 8.2 105 17-152 5-113 (212)
138 1p3y_1 MRSD protein; flavoprot 41.0 24 0.00082 30.0 3.9 44 15-59 8-51 (194)
139 1lss_A TRK system potassium up 40.9 18 0.00061 28.2 3.0 32 15-51 4-35 (140)
140 1p9o_A Phosphopantothenoylcyst 40.8 25 0.00084 32.5 4.2 37 18-54 40-90 (313)
141 2ejb_A Probable aromatic acid 40.5 45 0.0015 28.1 5.6 42 17-59 3-44 (189)
142 3s2u_A UDP-N-acetylglucosamine 40.5 44 0.0015 31.3 6.2 37 283-321 3-39 (365)
143 3ea0_A ATPase, para family; al 39.1 1.6E+02 0.0054 25.2 9.4 37 18-54 7-45 (245)
144 3kjh_A CO dehydrogenase/acetyl 38.6 24 0.00081 30.8 3.8 39 16-54 1-39 (254)
145 4gud_A Imidazole glycerol phos 38.0 48 0.0016 28.2 5.6 29 284-318 4-32 (211)
146 3lrx_A Putative hydrogenase; a 37.9 29 0.00098 28.2 3.9 37 15-54 23-59 (158)
147 3fwz_A Inner membrane protein 37.7 28 0.00097 27.4 3.8 31 17-52 9-39 (140)
148 3e9m_A Oxidoreductase, GFO/IDH 37.7 2.4E+02 0.0081 25.7 11.0 110 284-412 7-125 (330)
149 1pno_A NAD(P) transhydrogenase 37.6 33 0.0011 28.1 3.9 39 16-54 24-65 (180)
150 2jk1_A HUPR, hydrogenase trans 37.4 80 0.0027 24.0 6.5 63 380-446 71-133 (139)
151 3llv_A Exopolyphosphatase-rela 37.3 22 0.00076 27.9 3.1 31 17-52 8-38 (141)
152 3qjg_A Epidermin biosynthesis 37.1 1.6E+02 0.0056 24.3 8.4 115 283-408 6-143 (175)
153 4hb9_A Similarities with proba 36.9 24 0.00083 33.3 3.8 31 16-51 2-32 (412)
154 1d4o_A NADP(H) transhydrogenas 36.8 35 0.0012 28.1 3.9 39 16-54 23-64 (184)
155 2hy5_A Putative sulfurtransfer 36.2 49 0.0017 25.7 4.9 41 19-59 5-48 (130)
156 2fb6_A Conserved hypothetical 34.7 43 0.0015 25.7 4.2 40 15-54 7-50 (117)
157 1bg6_A N-(1-D-carboxylethyl)-L 34.7 28 0.00097 32.4 3.8 32 15-51 4-35 (359)
158 2fsv_C NAD(P) transhydrogenase 34.5 38 0.0013 28.4 3.9 39 16-54 47-88 (203)
159 3afo_A NADH kinase POS5; alpha 34.4 26 0.0009 33.4 3.4 60 352-429 107-171 (388)
160 3da8_A Probable 5'-phosphoribo 34.1 1.7E+02 0.0058 25.1 8.3 117 300-443 77-195 (215)
161 2l2q_A PTS system, cellobiose- 33.9 55 0.0019 24.6 4.7 37 15-51 4-40 (109)
162 3o1l_A Formyltetrahydrofolate 33.8 1.2E+02 0.0041 27.7 7.7 118 298-442 167-286 (302)
163 1djl_A Transhydrogenase DIII; 33.6 40 0.0014 28.4 3.9 39 16-54 46-87 (207)
164 2r6a_A DNAB helicase, replicat 33.2 46 0.0016 32.4 5.2 40 16-55 204-244 (454)
165 3eag_A UDP-N-acetylmuramate:L- 32.8 46 0.0016 30.7 4.9 32 16-51 5-36 (326)
166 3kcn_A Adenylate cyclase homol 32.7 82 0.0028 24.5 5.9 49 379-429 74-123 (151)
167 2an1_A Putative kinase; struct 32.6 18 0.00063 32.8 2.0 29 359-389 63-95 (292)
168 1jx7_A Hypothetical protein YC 32.3 49 0.0017 24.8 4.3 33 27-59 16-50 (117)
169 3nrb_A Formyltetrahydrofolate 32.1 97 0.0033 28.0 6.7 116 300-442 153-270 (287)
170 3tov_A Glycosyl transferase fa 31.8 1.7E+02 0.0058 27.0 8.7 41 16-56 186-230 (349)
171 2r85_A PURP protein PF1517; AT 31.4 41 0.0014 30.8 4.3 33 15-53 2-34 (334)
172 3fgn_A Dethiobiotin synthetase 31.3 48 0.0017 29.3 4.5 38 14-51 24-63 (251)
173 1meo_A Phosophoribosylglycinam 30.8 2.1E+02 0.0073 24.3 8.4 114 302-442 69-184 (209)
174 2bru_C NAD(P) transhydrogenase 30.7 38 0.0013 27.9 3.2 39 16-54 31-72 (186)
175 1u0t_A Inorganic polyphosphate 30.5 17 0.00059 33.4 1.4 31 357-389 73-107 (307)
176 3ew7_A LMO0794 protein; Q8Y8U8 30.4 70 0.0024 26.9 5.4 33 16-52 1-33 (221)
177 3pfn_A NAD kinase; structural 30.4 19 0.00067 33.9 1.8 31 355-387 104-138 (365)
178 4e5s_A MCCFLIKE protein (BA_56 30.3 63 0.0021 30.0 5.3 73 296-389 62-136 (331)
179 3tqr_A Phosphoribosylglycinami 30.0 2E+02 0.0069 24.6 8.1 104 14-152 4-114 (215)
180 4dll_A 2-hydroxy-3-oxopropiona 29.8 58 0.002 29.9 5.0 33 14-51 30-62 (320)
181 3q2i_A Dehydrogenase; rossmann 29.5 2.9E+02 0.01 25.3 10.0 124 284-429 15-150 (354)
182 1qgu_B Protein (nitrogenase mo 29.3 1.7E+02 0.0057 29.0 8.5 34 15-53 360-393 (519)
183 3kcq_A Phosphoribosylglycinami 29.2 2.2E+02 0.0075 24.4 8.2 98 15-152 8-113 (215)
184 1q57_A DNA primase/helicase; d 28.9 53 0.0018 32.4 4.8 41 16-56 243-284 (503)
185 3m2t_A Probable dehydrogenase; 28.8 2.5E+02 0.0085 26.0 9.4 110 284-412 7-126 (359)
186 3h2s_A Putative NADH-flavin re 28.8 78 0.0027 26.7 5.4 33 16-52 1-33 (224)
187 3obi_A Formyltetrahydrofolate 28.8 1.1E+02 0.0036 27.8 6.4 116 300-442 154-271 (288)
188 2raf_A Putative dinucleotide-b 28.6 43 0.0015 28.5 3.7 33 14-51 18-50 (209)
189 3dm5_A SRP54, signal recogniti 28.6 72 0.0025 31.0 5.5 42 15-56 100-141 (443)
190 4gbj_A 6-phosphogluconate dehy 28.4 53 0.0018 29.9 4.4 28 17-49 7-34 (297)
191 3auf_A Glycinamide ribonucleot 28.1 1.7E+02 0.006 25.3 7.5 115 301-442 90-206 (229)
192 2qs7_A Uncharacterized protein 28.0 87 0.003 24.9 5.2 38 17-54 9-47 (144)
193 4hn9_A Iron complex transport 27.9 77 0.0026 29.2 5.5 31 122-152 116-146 (335)
194 3e8x_A Putative NAD-dependent 27.8 86 0.0029 26.8 5.6 34 15-52 21-54 (236)
195 3tqr_A Phosphoribosylglycinami 27.6 2E+02 0.0069 24.6 7.7 115 301-442 72-188 (215)
196 3of5_A Dethiobiotin synthetase 27.4 58 0.002 28.3 4.3 37 15-51 3-41 (228)
197 4ds3_A Phosphoribosylglycinami 27.4 2.9E+02 0.0098 23.5 9.8 103 15-152 7-117 (209)
198 3dfu_A Uncharacterized protein 27.3 45 0.0015 29.2 3.5 33 14-51 5-37 (232)
199 3lou_A Formyltetrahydrofolate 27.3 1.2E+02 0.004 27.6 6.4 115 301-442 160-276 (292)
200 2lpm_A Two-component response 27.3 50 0.0017 25.5 3.5 30 121-150 52-86 (123)
201 3l4b_C TRKA K+ channel protien 27.3 24 0.00081 30.3 1.7 32 16-52 1-32 (218)
202 3gpi_A NAD-dependent epimerase 27.2 71 0.0024 28.4 5.0 32 16-52 4-35 (286)
203 3kcq_A Phosphoribosylglycinami 26.9 1.6E+02 0.0055 25.2 7.0 114 302-442 72-187 (215)
204 3d3j_A Enhancer of mRNA-decapp 26.9 58 0.002 29.9 4.3 34 16-52 133-168 (306)
205 1eiw_A Hypothetical protein MT 26.6 75 0.0026 24.1 4.2 63 359-428 38-109 (111)
206 3n0v_A Formyltetrahydrofolate 26.5 1.4E+02 0.0046 27.0 6.7 116 300-442 154-271 (286)
207 3zzm_A Bifunctional purine bio 26.5 42 0.0014 33.0 3.3 55 16-80 10-66 (523)
208 3u7q_B Nitrogenase molybdenum- 26.3 4.1E+02 0.014 26.2 10.8 33 15-52 364-396 (523)
209 3s40_A Diacylglycerol kinase; 26.1 1.2E+02 0.0041 27.5 6.4 81 285-390 12-98 (304)
210 3hn2_A 2-dehydropantoate 2-red 25.8 56 0.0019 29.8 4.1 46 16-72 3-48 (312)
211 3ezy_A Dehydrogenase; structur 25.7 2.9E+02 0.0098 25.3 9.2 109 285-412 5-122 (344)
212 3av3_A Phosphoribosylglycinami 25.7 2.3E+02 0.008 24.1 7.8 115 301-442 71-187 (212)
213 1dhr_A Dihydropteridine reduct 25.6 72 0.0025 27.6 4.7 32 17-51 8-39 (241)
214 3dhn_A NAD-dependent epimerase 25.6 1.4E+02 0.0046 25.2 6.4 33 16-52 5-37 (227)
215 3ahc_A Phosphoketolase, xylulo 25.6 3.8E+02 0.013 28.3 10.6 76 365-449 727-807 (845)
216 3to5_A CHEY homolog; alpha(5)b 25.6 74 0.0025 24.9 4.2 47 380-428 86-132 (134)
217 3d3k_A Enhancer of mRNA-decapp 25.6 62 0.0021 28.8 4.1 34 16-52 86-121 (259)
218 1jzt_A Hypothetical 27.5 kDa p 25.5 54 0.0018 28.9 3.7 33 16-51 59-93 (246)
219 3p9x_A Phosphoribosylglycinami 25.4 2.4E+02 0.0081 24.1 7.7 103 301-426 70-174 (211)
220 2d1p_A TUSD, hypothetical UPF0 25.4 1.1E+02 0.0039 24.1 5.3 43 16-58 13-59 (140)
221 2vo1_A CTP synthase 1; pyrimid 25.3 73 0.0025 28.5 4.4 42 15-56 22-66 (295)
222 2a3d_A Protein (de novo three- 25.3 69 0.0024 20.6 3.1 31 433-467 5-35 (73)
223 3jx9_A Putative phosphoheptose 25.3 56 0.0019 27.0 3.5 33 17-52 80-113 (170)
224 2bln_A Protein YFBG; transfera 25.1 2.9E+02 0.01 25.0 8.8 94 16-152 1-106 (305)
225 3foj_A Uncharacterized protein 25.0 1.3E+02 0.0044 21.7 5.4 33 15-51 56-88 (100)
226 1gsa_A Glutathione synthetase; 25.0 64 0.0022 29.0 4.4 37 16-52 2-41 (316)
227 3euw_A MYO-inositol dehydrogen 24.9 3.9E+02 0.013 24.2 11.8 109 284-412 6-123 (344)
228 4g65_A TRK system potassium up 24.8 23 0.00079 34.7 1.3 59 363-424 302-366 (461)
229 1jkx_A GART;, phosphoribosylgl 24.8 2.2E+02 0.0076 24.2 7.5 115 301-442 68-184 (212)
230 4ds3_A Phosphoribosylglycinami 24.8 1.5E+02 0.0051 25.3 6.3 115 301-442 75-191 (209)
231 3h4t_A Glycosyltransferase GTF 24.5 4.2E+02 0.014 24.6 10.3 37 17-53 222-259 (404)
232 3bul_A Methionine synthase; tr 24.5 68 0.0023 32.3 4.6 39 15-53 98-136 (579)
233 3evn_A Oxidoreductase, GFO/IDH 24.4 3.2E+02 0.011 24.8 9.1 108 284-411 7-124 (329)
234 3ip3_A Oxidoreductase, putativ 24.4 2.7E+02 0.0092 25.3 8.7 107 285-407 5-120 (337)
235 3dqp_A Oxidoreductase YLBE; al 24.3 90 0.0031 26.3 5.0 33 16-52 1-33 (219)
236 3f67_A Putative dienelactone h 24.3 91 0.0031 26.2 5.1 36 16-51 32-67 (241)
237 1ks9_A KPA reductase;, 2-dehyd 23.9 56 0.0019 29.1 3.7 31 16-51 1-31 (291)
238 3l18_A Intracellular protease 23.6 1.7E+02 0.0058 23.4 6.4 38 15-53 2-39 (168)
239 3u3x_A Oxidoreductase; structu 23.5 2.1E+02 0.0071 26.5 7.7 112 283-412 27-146 (361)
240 4h1h_A LMO1638 protein; MCCF-l 23.5 92 0.0032 28.7 5.1 28 296-323 62-89 (327)
241 3l77_A Short-chain alcohol deh 23.5 87 0.003 26.8 4.7 33 16-51 2-34 (235)
242 2gkg_A Response regulator homo 23.3 79 0.0027 23.3 4.0 47 380-429 79-125 (127)
243 2qyt_A 2-dehydropantoate 2-red 23.3 32 0.0011 31.4 1.9 33 14-51 7-45 (317)
244 3enk_A UDP-glucose 4-epimerase 23.3 81 0.0028 28.7 4.8 33 15-51 5-37 (341)
245 3e18_A Oxidoreductase; dehydro 23.3 4.4E+02 0.015 24.2 11.0 107 284-411 7-122 (359)
246 2d1p_B TUSC, hypothetical UPF0 23.3 1.5E+02 0.0051 22.5 5.5 38 17-54 4-43 (119)
247 2bon_A Lipid kinase; DAG kinas 23.2 1.4E+02 0.0048 27.4 6.4 68 299-390 44-119 (332)
248 2o8n_A APOA-I binding protein; 23.1 71 0.0024 28.5 4.0 34 16-52 80-115 (265)
249 4e08_A DJ-1 beta; flavodoxin-l 23.0 2.6E+02 0.0088 22.9 7.5 36 17-53 7-42 (190)
250 2qv7_A Diacylglycerol kinase D 22.8 1.3E+02 0.0045 27.7 6.1 82 285-390 28-115 (337)
251 3sbx_A Putative uncharacterize 22.8 94 0.0032 26.1 4.5 36 14-50 12-51 (189)
252 3cky_A 2-hydroxymethyl glutara 22.8 89 0.003 28.0 4.8 32 15-51 4-35 (301)
253 2q8p_A Iron-regulated surface 22.7 99 0.0034 27.0 5.1 31 122-152 60-91 (260)
254 1wcv_1 SOJ, segregation protei 22.7 73 0.0025 27.9 4.1 38 17-54 8-46 (257)
255 3eme_A Rhodanese-like domain p 22.7 1.3E+02 0.0043 21.9 4.9 33 15-51 56-88 (103)
256 2ew2_A 2-dehydropantoate 2-red 22.6 61 0.0021 29.3 3.7 31 16-51 4-34 (316)
257 4h1h_A LMO1638 protein; MCCF-l 22.5 2.3E+02 0.0079 26.0 7.6 104 281-388 11-135 (327)
258 3qsg_A NAD-binding phosphogluc 22.5 48 0.0016 30.3 2.9 37 10-51 19-56 (312)
259 3ot1_A 4-methyl-5(B-hydroxyeth 22.5 2.3E+02 0.0079 23.8 7.2 37 16-53 10-46 (208)
260 1g3q_A MIND ATPase, cell divis 22.4 87 0.003 26.8 4.6 37 17-53 4-41 (237)
261 3lqk_A Dipicolinate synthase s 22.4 3.5E+02 0.012 22.8 10.2 143 282-429 7-186 (201)
262 2r6j_A Eugenol synthase 1; phe 22.4 85 0.0029 28.3 4.7 33 17-53 13-45 (318)
263 3hwr_A 2-dehydropantoate 2-red 22.3 62 0.0021 29.6 3.7 31 14-49 18-48 (318)
264 3sr3_A Microcin immunity prote 22.2 97 0.0033 28.7 5.0 72 297-389 64-137 (336)
265 3ox4_A Alcohol dehydrogenase 2 22.1 1E+02 0.0035 29.2 5.2 43 273-317 22-64 (383)
266 2rjn_A Response regulator rece 22.1 33 0.0011 27.0 1.5 58 380-442 78-136 (154)
267 4e5v_A Putative THUA-like prot 21.9 1E+02 0.0035 27.7 4.9 38 14-52 3-43 (281)
268 1qyd_A Pinoresinol-lariciresin 21.9 89 0.0031 28.0 4.7 33 16-52 5-37 (313)
269 3n7t_A Macrophage binding prot 21.8 1.8E+02 0.0063 25.4 6.5 38 16-53 10-58 (247)
270 3goc_A Endonuclease V; alpha-b 21.8 1.4E+02 0.0048 26.1 5.4 30 121-150 106-142 (237)
271 2a33_A Hypothetical protein; s 21.3 2E+02 0.0068 24.7 6.4 91 283-387 44-145 (215)
272 3gdo_A Uncharacterized oxidore 21.3 4.3E+02 0.015 24.3 9.4 108 284-412 7-123 (358)
273 3q9l_A Septum site-determining 21.3 89 0.003 27.2 4.4 36 18-53 5-41 (260)
274 1iow_A DD-ligase, DDLB, D-ALA\ 21.2 1.2E+02 0.0041 27.0 5.4 37 16-52 3-43 (306)
275 3qha_A Putative oxidoreductase 21.2 56 0.0019 29.6 3.1 32 15-51 15-46 (296)
276 4dim_A Phosphoribosylglycinami 21.1 92 0.0032 29.4 4.8 36 10-52 4-39 (403)
277 2hmt_A YUAA protein; RCK, KTN, 21.0 61 0.0021 25.0 3.0 30 17-51 8-37 (144)
278 1fy2_A Aspartyl dipeptidase; s 20.9 1.4E+02 0.0047 25.9 5.4 42 273-316 24-65 (229)
279 2etv_A Iron(III) ABC transport 20.9 82 0.0028 29.2 4.3 30 122-151 96-126 (346)
280 3hdg_A Uncharacterized protein 20.9 1.5E+02 0.0053 22.1 5.4 48 380-429 78-125 (137)
281 1zi8_A Carboxymethylenebutenol 20.9 1.2E+02 0.004 25.3 5.1 36 16-51 28-63 (236)
282 3db2_A Putative NADPH-dependen 20.8 3.1E+02 0.01 25.2 8.3 109 284-412 7-124 (354)
283 2p4q_A 6-phosphogluconate dehy 20.8 58 0.002 32.2 3.2 39 4-51 3-41 (497)
284 2w36_A Endonuclease V; hypoxan 20.8 1.2E+02 0.0042 26.2 4.9 30 121-150 102-138 (225)
285 3g0o_A 3-hydroxyisobutyrate de 20.7 60 0.002 29.4 3.2 32 15-51 7-38 (303)
286 3md9_A Hemin-binding periplasm 20.7 83 0.0028 27.4 4.1 29 122-150 59-89 (255)
287 3obb_A Probable 3-hydroxyisobu 20.7 70 0.0024 29.1 3.6 28 17-49 5-32 (300)
288 3imf_A Short chain dehydrogena 20.6 1.3E+02 0.0044 26.2 5.3 32 17-51 7-38 (257)
289 2q37_A OHCU decarboxylase; 2-O 20.6 2.6E+02 0.0089 23.2 6.8 55 393-448 117-172 (181)
290 3kkj_A Amine oxidase, flavin-c 20.6 52 0.0018 28.3 2.7 30 17-51 4-33 (336)
291 2o6l_A UDP-glucuronosyltransfe 20.6 2.4E+02 0.0081 22.3 6.7 36 17-52 22-60 (170)
292 3ip0_A 2-amino-4-hydroxy-6-hyd 20.6 1E+02 0.0036 25.0 4.2 28 285-312 2-29 (158)
293 3lyu_A Putative hydrogenase; t 20.5 83 0.0028 24.8 3.6 35 15-52 18-52 (142)
294 4da9_A Short-chain dehydrogena 20.5 1.3E+02 0.0045 26.6 5.5 33 16-51 29-61 (280)
295 1zl0_A Hypothetical protein PA 20.5 1.4E+02 0.0048 27.3 5.6 74 296-390 64-139 (311)
296 4fbl_A LIPS lipolytic enzyme; 20.5 65 0.0022 28.5 3.3 30 20-49 55-84 (281)
297 1hdo_A Biliverdin IX beta redu 20.5 1.6E+02 0.0055 24.1 5.8 33 16-52 4-36 (206)
298 1ny5_A Transcriptional regulat 20.4 1.7E+02 0.0057 27.6 6.4 61 379-444 70-130 (387)
299 3end_A Light-independent proto 20.1 1E+02 0.0035 27.7 4.7 37 17-53 43-79 (307)
300 2xxa_A Signal recognition part 20.0 1.3E+02 0.0045 28.9 5.6 42 15-56 100-142 (433)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=3.6e-69 Score=538.84 Aligned_cols=441 Identities=27% Similarity=0.428 Sum_probs=359.3
Q ss_pred CCCCCCCEEEEEcCCCccChHHHHHHHHHHHhCC--CeEEEEeCCCCCccccc-ccCCCCCeeEEecCCCCCCCcccccC
Q 012151 10 MVPRNGRRVILFPLPFQGHINPMLHLASILYSKG--FSVTIIHTDFNFSSTNY-FSCNYPHFDFHSFPDGFSETEASVED 86 (470)
Q Consensus 10 m~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rG--h~V~~~~~~~~~~~~~~-~~~~~~gi~~~~~~~~~~~~~~~~~~ 86 (470)
|+..++.||+++|+|++||++|++.||+.|+++| +.|||++++.+...+.+ ......+++|..+|++++++.+...+
T Consensus 8 M~~~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ipdglp~~~~~~~~ 87 (454)
T 3hbf_A 8 MNGNNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGLPKGYVSSGN 87 (454)
T ss_dssp ----CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCCCTTCCCCSC
T ss_pred ccCCCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecCCCCCCCccccCC
Confidence 5555678999999999999999999999999999 99999999744433322 10113579999999999887644434
Q ss_pred HHHHHHHHHhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCccchHHHHhhcCCCeEEEecccHHHHHHHHhchhh
Q 012151 87 VAVFFTAINGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFWFFTHTVAADFKLPTIVLQTCGVSGFLAFTAYPIL 166 (470)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~~~~~~vA~~~giP~v~~~~~~~~~~~~~~~~~~~ 166 (470)
....+..+.+.+...+++.++++..+.+ .++||||+|.++.|+..+|+++|||++.|+++++..+..+.+.+..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~------~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~ 161 (454)
T 3hbf_A 88 PREPIFLFIKAMQENFKHVIDEAVAETG------KNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLI 161 (454)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHC------CCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcC------CCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHH
Confidence 4444555555555667777777654332 4899999999999999999999999999999999988887765543
Q ss_pred hhccCC-CCCCCCCCcccCCCCCCCCccccCcccc-cCchhHHHHHHHHHhhhccccEEEEcChHHhhHHHHHHHhhccC
Q 012151 167 RERAYL-PVQDHQSLETPVTEFPPLRVKDIQVLET-MDQENVYRFVSAIDTQIMASSGVIWNSYRDLEQAGLGLAHQKYL 244 (470)
Q Consensus 167 ~~~~~~-p~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~p~~~~~~~~~~ 244 (470)
...... .... ......+|+++.++.++++.... .....+.+.+.+..+....++.+++||+++||++++..+ ++.+
T Consensus 162 ~~~~~~~~~~~-~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~-~~~~ 239 (454)
T 3hbf_A 162 REKTGSKEVHD-VKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENEL-NSKF 239 (454)
T ss_dssp HHTCCHHHHTT-SSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHH-HTTS
T ss_pred HhhcCCCcccc-ccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHH-HhcC
Confidence 322100 0011 11223478888899999987643 344556777777888888999999999999999999888 8876
Q ss_pred CCCeeeeccCCCCCCCCCCCCCccchhhhhhhcCCCCCCeEEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEEcCCCC
Q 012151 245 SIPIFPIGPLHKCSPASSGSLSSQDYQRSISWLDKQTPKSVVYISFGSVIAINKDGFLEIAWGVANSRMPFLWVVRPGLV 324 (470)
Q Consensus 245 ~~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~ 324 (470)
+++++|||++...+. ...+.+ +++.+||+.++++++|||||||+...+.+++..++.+|++++++|||+++.+.
T Consensus 240 -~~v~~vGPl~~~~~~---~~~~~~-~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~- 313 (454)
T 3hbf_A 240 -KLLLNVGPFNLTTPQ---RKVSDE-HGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDP- 313 (454)
T ss_dssp -SCEEECCCHHHHSCC---SCCCCT-TCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCH-
T ss_pred -CCEEEECCccccccc---ccccch-HHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcc-
Confidence 789999999864322 112223 45999999888899999999999998899999999999999999999997643
Q ss_pred CCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHhhhcCCceecCCCccchhhhHHHHHhhh
Q 012151 325 SGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMCEGVPMICQPYLPDQMVNARYVSHFW 404 (470)
Q Consensus 325 ~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~ 404 (470)
.+.+|+++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.||+++++.+
T Consensus 314 -----~~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~ 388 (454)
T 3hbf_A 314 -----KEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVL 388 (454)
T ss_dssp -----HHHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTS
T ss_pred -----hhcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhh
Confidence 224889999999999999999999999999999999999999999999999999999999999999999999845
Q ss_pred heeEEcCC-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 012151 405 RVGLHSEW-KLERMEIERAIRRVMVEAEGQEMRARIMHLKEKVDFCLRKGGSSHQSLERLIDHILS 469 (470)
Q Consensus 405 G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 469 (470)
|+|+.++. .+++++|.++|+++|++++|++||+||++|++++++++.+||+|.++++++++.+.+
T Consensus 389 g~Gv~l~~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~~ 454 (454)
T 3hbf_A 389 EIGVGVDNGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVTS 454 (454)
T ss_dssp CSEEECGGGSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHTC
T ss_pred CeeEEecCCCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHhC
Confidence 99999988 899999999999999986667999999999999999999999999999999999853
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=3.4e-64 Score=512.74 Aligned_cols=445 Identities=30% Similarity=0.644 Sum_probs=346.5
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccCC-----CCCeeEEecCCCCCCCc---ccccC
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTNYFSCN-----YPHFDFHSFPDGFSETE---ASVED 86 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~-----~~gi~~~~~~~~~~~~~---~~~~~ 86 (470)
++||+++|++++||++|++.||++|++|||+|||++++.+...+.+.... ..+++|+++|++++... ....+
T Consensus 8 ~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~~~ 87 (482)
T 2pq6_A 8 KPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVSQD 87 (482)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------CC
T ss_pred CCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcchh
Confidence 57999999999999999999999999999999999997654443321000 14899999998776521 11234
Q ss_pred HHHHHHHHHhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCccchHHHHhhcCCCeEEEecccHHHHHHHHhchhh
Q 012151 87 VAVFFTAINGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFWFFTHTVAADFKLPTIVLQTCGVSGFLAFTAYPIL 166 (470)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~~~~~~vA~~~giP~v~~~~~~~~~~~~~~~~~~~ 166 (470)
...++..+...|...++++++.+....+ +.+||+||+|.++.|+..+|+++|||+|.++++++.......+++.+
T Consensus 88 ~~~~~~~~~~~~~~~l~~ll~~l~~~~~-----~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 162 (482)
T 2pq6_A 88 VPTLCQSVRKNFLKPYCELLTRLNHSTN-----VPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSF 162 (482)
T ss_dssp HHHHHHHHTTSSHHHHHHHHHHHHTCSS-----SCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHhhhcc-----CCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHH
Confidence 5555666656788888888888753200 04899999999999999999999999999999988777666555655
Q ss_pred hhccCCCCCCC--------CCCcccCCCCCCCCccccCccccc--CchhHHHHHHHHHhhhccccEEEEcChHHhhHHHH
Q 012151 167 RERAYLPVQDH--------QSLETPVTEFPPLRVKDIQVLETM--DQENVYRFVSAIDTQIMASSGVIWNSYRDLEQAGL 236 (470)
Q Consensus 167 ~~~~~~p~~~~--------~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~p~~ 236 (470)
...++.|.... ....+.+++++.++..+++.+... ....+.+.+....+....++.+++||+++||++++
T Consensus 163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~ 242 (482)
T 2pq6_A 163 VERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVI 242 (482)
T ss_dssp HHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHH
T ss_pred HhcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHH
Confidence 55666665321 112223456655666666544221 12334455555667778899999999999999988
Q ss_pred HHHhhccCCCCeeeeccCCCC--CC-------CCCCCCCccchhhhhhhcCCCCCCeEEEEEcCcccccCHHHHHHHHHH
Q 012151 237 GLAHQKYLSIPIFPIGPLHKC--SP-------ASSGSLSSQDYQRSISWLDKQTPKSVVYISFGSVIAINKDGFLEIAWG 307 (470)
Q Consensus 237 ~~~~~~~~~~~v~~vGpl~~~--~~-------~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~i~~a 307 (470)
..+ ++.+ +++++|||++.. .. ......++.+ .++.+|++.++++++|||||||+...+.+++..++.+
T Consensus 243 ~~~-~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~ 319 (482)
T 2pq6_A 243 NAL-SSTI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKED-TECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWG 319 (482)
T ss_dssp HHH-HTTC-TTEEECCCHHHHHHTSTTGGGGCC----------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHH
T ss_pred HHH-HHhC-CcEEEEcCCcccccccccccccccccccccccc-hHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHH
Confidence 888 8877 789999999753 11 0001122334 5589999988888999999999988788889999999
Q ss_pred HHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHhhhcCCceecC
Q 012151 308 VANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMCEGVPMICQ 387 (470)
Q Consensus 308 l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~ 387 (470)
|++.+.++||+++.+...+. ...+|+++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||||++
T Consensus 320 l~~~~~~~l~~~~~~~~~~~--~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~ 397 (482)
T 2pq6_A 320 LANCKKSFLWIIRPDLVIGG--SVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCW 397 (482)
T ss_dssp HHHTTCEEEEECCGGGSTTT--GGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEEC
T ss_pred HHhcCCcEEEEEcCCccccc--cccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEec
Confidence 99999999999975432221 1237888888889999999999999999999999999999999999999999999999
Q ss_pred CCccchhhhHHHHH-hhhheeEEcCCcccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 012151 388 PYLPDQMVNARYVS-HFWRVGLHSEWKLERMEIERAIRRVMVEAEGQEMRARIMHLKEKVDFCLRKGGSSHQSLERLIDH 466 (470)
Q Consensus 388 P~~~DQ~~na~rv~-~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~ 466 (470)
|+..||+.||++++ + +|+|+.++..+++++|.++|+++|+|+++++||+||+++++++++++.+||+|.+++++|++.
T Consensus 398 P~~~dQ~~na~~~~~~-~G~g~~l~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~ 476 (482)
T 2pq6_A 398 PFFADQPTDCRFICNE-WEIGMEIDTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKD 476 (482)
T ss_dssp CCSTTHHHHHHHHHHT-SCCEEECCSSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHH
T ss_pred CcccchHHHHHHHHHH-hCEEEEECCCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 99999999999997 7 699999986789999999999999984445899999999999999999999999999999999
Q ss_pred HHcC
Q 012151 467 ILSF 470 (470)
Q Consensus 467 l~~~ 470 (470)
++++
T Consensus 477 ~~~~ 480 (482)
T 2pq6_A 477 VLLK 480 (482)
T ss_dssp TTCC
T ss_pred HHhc
Confidence 8753
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1e-61 Score=492.93 Aligned_cols=445 Identities=26% Similarity=0.414 Sum_probs=331.5
Q ss_pred CCCCCCCEEEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEeCCCC--CcccccccCC-CCCeeEEecCCCCCCCccccc
Q 012151 10 MVPRNGRRVILFPLPFQGHINPMLHLASILYSK-GFSVTIIHTDFN--FSSTNYFSCN-YPHFDFHSFPDGFSETEASVE 85 (470)
Q Consensus 10 m~~~~~~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~V~~~~~~~~--~~~~~~~~~~-~~gi~~~~~~~~~~~~~~~~~ 85 (470)
|.+.+++||+++|++++||++|+++||++|++| ||+|||++++.. ...+..+... ..+++|+++++....+.....
T Consensus 1 M~~~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~ 80 (480)
T 2vch_A 1 MEESKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDLTDLSSST 80 (480)
T ss_dssp -----CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCCCTTSCTTC
T ss_pred CCCCCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCCCCCCCCch
Confidence 444456899999999999999999999999998 999999999763 3333311111 368999999864322211112
Q ss_pred CHHHHHHHHHhhcchHHHHHHHHHHhcccCCCCCCCCC-cEEEeCCCccchHHHHhhcCCCeEEEecccHHHHHHHHhch
Q 012151 86 DVAVFFTAINGKCIMPFRDCLAEILMKSKADQNKDSSP-CCLITDAFWFFTHTVAADFKLPTIVLQTCGVSGFLAFTAYP 164 (470)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~p-Dlvi~D~~~~~~~~vA~~~giP~v~~~~~~~~~~~~~~~~~ 164 (470)
+....+......+.+.++++++++... .++ |+||+|.+..|+..+|+++|||++.++++++.....+.+++
T Consensus 81 ~~~~~~~~~~~~~~~~l~~ll~~~~~~--------~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 152 (480)
T 2vch_A 81 RIESRISLTVTRSNPELRKVFDSFVEG--------GRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLP 152 (480)
T ss_dssp CHHHHHHHHHHTTHHHHHHHHHHHHHT--------TCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhhhHHHHHHHHHhccC--------CCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHH
Confidence 333333344455667777777776421 377 99999998899999999999999999999887766655544
Q ss_pred hhhhccCCCCCCCCCCcccCCCCCCCCccccCcccccCchhHHHHHHHHHhhhccccEEEEcChHHhhHHHHHHHhhc--
Q 012151 165 ILRERAYLPVQDHQSLETPVTEFPPLRVKDIQVLETMDQENVYRFVSAIDTQIMASSGVIWNSYRDLEQAGLGLAHQK-- 242 (470)
Q Consensus 165 ~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~p~~~~~~~~-- 242 (470)
........+..+ ......+|+++++...+++.....+.....+.+............+++|++.++|.+.+..+ ++
T Consensus 153 ~~~~~~~~~~~~-~~~~~~~Pg~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l-~~~~ 230 (480)
T 2vch_A 153 KLDETVSCEFRE-LTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKAL-QEPG 230 (480)
T ss_dssp HHHHHCCSCGGG-CSSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHH-HSCC
T ss_pred HHHhcCCCcccc-cCCcccCCCCCCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHH-Hhcc
Confidence 332221111111 00112345665555555554322222234444455555566778899999999999877766 53
Q ss_pred -cCCCCeeeeccCCCCCCCCCCCCCccchhhhhhhcCCCCCCeEEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEEcC
Q 012151 243 -YLSIPIFPIGPLHKCSPASSGSLSSQDYQRSISWLDKQTPKSVVYISFGSVIAINKDGFLEIAWGVANSRMPFLWVVRP 321 (470)
Q Consensus 243 -~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~ 321 (470)
.+ +++++|||++..... ....+.+ +++.+||+.++++++|||||||+...+.+++..++.||+.+++++||+++.
T Consensus 231 ~~~-~~v~~vGpl~~~~~~--~~~~~~~-~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~ 306 (480)
T 2vch_A 231 LDK-PPVYPVGPLVNIGKQ--EAKQTEE-SECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRS 306 (480)
T ss_dssp TTC-CCEEECCCCCCCSCS--CC------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCC-CcEEEEecccccccc--ccCccch-hHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECC
Confidence 13 689999999865321 0001122 458999998888899999999999888899999999999999999999986
Q ss_pred CCCCC----------CcccCCCchhHHHHhcCCceeee-ccChHhhhccCCcceeecccCchhhHHhhhcCCceecCCCc
Q 012151 322 GLVSG----------AEWVEPLPKGFLEMLDGRGCIVK-WAPQQEVLAHPAVGGFWTHSGWNSTLESMCEGVPMICQPYL 390 (470)
Q Consensus 322 ~~~~~----------~~~~~~~p~~~~~~~~~~~~~~~-~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~ 390 (470)
....+ .+..+.+|+++.++..++++++. |+||.+||+|+++++||||||+||++||+++|||||++|++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~ 386 (480)
T 2vch_A 307 PSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLY 386 (480)
T ss_dssp CCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS
T ss_pred ccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEecccc
Confidence 53211 11112489999988888888886 99999999999999999999999999999999999999999
Q ss_pred cchhhhHHHH-HhhhheeEEcCC----cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 012151 391 PDQMVNARYV-SHFWRVGLHSEW----KLERMEIERAIRRVMVEAEGQEMRARIMHLKEKVDFCLRKGGSSHQSLERLID 465 (470)
Q Consensus 391 ~DQ~~na~rv-~~~~G~G~~l~~----~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~ 465 (470)
.||+.||+++ ++ +|+|+.++. .+++++|+++|+++|+++++++||+||++|++++++++.+||++.++++++++
T Consensus 387 ~DQ~~na~~l~~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~ 465 (480)
T 2vch_A 387 AEQKMNAVLLSED-IRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVAL 465 (480)
T ss_dssp TTHHHHHHHHHHT-TCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHH
T ss_pred ccchHHHHHHHHH-hCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 9999999997 68 799999975 48999999999999995445899999999999999999999999999999999
Q ss_pred HHHc
Q 012151 466 HILS 469 (470)
Q Consensus 466 ~l~~ 469 (470)
.+++
T Consensus 466 ~~~~ 469 (480)
T 2vch_A 466 KWKA 469 (480)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8863
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=5.1e-61 Score=484.68 Aligned_cols=437 Identities=25% Similarity=0.432 Sum_probs=329.2
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCe--EEEEeCCCCCccccc-cc-CCCCCeeEEecCCCCCCCcccccCHHHH
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKGFS--VTIIHTDFNFSSTNY-FS-CNYPHFDFHSFPDGFSETEASVEDVAVF 90 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~--V~~~~~~~~~~~~~~-~~-~~~~gi~~~~~~~~~~~~~~~~~~~~~~ 90 (470)
++||+++|+|++||++|+++||+.|++|||+ ||+++++.......+ .. ....+++|+.++++++++.....+....
T Consensus 7 ~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~~glp~~~~~~~~~~~~ 86 (456)
T 2c1x_A 7 NPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPEGYVFAGRPQED 86 (456)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCTTCCCCCCTTHH
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCCCCCCCcccccCChHHH
Confidence 5799999999999999999999999999765 577877532222111 00 0125899999998877653221222333
Q ss_pred HHHHHhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCccchHHHHhhcCCCeEEEecccHHHHHHHHhchhhhhc-
Q 012151 91 FTAINGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFWFFTHTVAADFKLPTIVLQTCGVSGFLAFTAYPILRER- 169 (470)
Q Consensus 91 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~~~~~~vA~~~giP~v~~~~~~~~~~~~~~~~~~~~~~- 169 (470)
+..+...+...+.++++++.+..+ .+||+||+|.++.|+..+|+++|||+|.++++++.......+.+.....
T Consensus 87 ~~~~~~~~~~~~~~~l~~l~~~~~------~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 160 (456)
T 2c1x_A 87 IELFTRAAPESFRQGMVMAVAETG------RPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKI 160 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT------CCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHHHHHHhccC------CCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhcc
Confidence 333444444556666665543212 4899999999989999999999999999999987766554433322111
Q ss_pred cCCCC-CCCCCCcccCCCCCCCCccccCcccc--cCchhHHHHHHHHHhhhccccEEEEcChHHhhHHHHHHHhhccCCC
Q 012151 170 AYLPV-QDHQSLETPVTEFPPLRVKDIQVLET--MDQENVYRFVSAIDTQIMASSGVIWNSYRDLEQAGLGLAHQKYLSI 246 (470)
Q Consensus 170 ~~~p~-~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~p~~~~~~~~~~~~ 246 (470)
.+.+. .........+++++.++..+++.... .....+.+.+.+..+....++.+++|++++||++++..+ ++.+ +
T Consensus 161 ~~~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~-~~~~-~ 238 (456)
T 2c1x_A 161 GVSGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDL-KSKL-K 238 (456)
T ss_dssp CSSCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHH-HHHS-S
T ss_pred CCcccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHH-HhcC-C
Confidence 11110 00011112356666666666654221 111233444444555567789999999999999988887 8776 6
Q ss_pred CeeeeccCCCCCCCCCCCCCccchhhhhhhcCCCCCCeEEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCC
Q 012151 247 PIFPIGPLHKCSPASSGSLSSQDYQRSISWLDKQTPKSVVYISFGSVIAINKDGFLEIAWGVANSRMPFLWVVRPGLVSG 326 (470)
Q Consensus 247 ~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~ 326 (470)
++++|||+...... ..++++ .++.+|++.++++++|||||||+...+.+++..++.+|+..+.++||+++.+.
T Consensus 239 ~~~~vGpl~~~~~~---~~~~~~-~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~--- 311 (456)
T 2c1x_A 239 TYLNIGPFNLITPP---PVVPNT-TGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKA--- 311 (456)
T ss_dssp CEEECCCHHHHC-------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGG---
T ss_pred CEEEecCcccCccc---ccccch-hhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCcc---
Confidence 89999999864221 113333 45889999888889999999999988888999999999999999999996542
Q ss_pred CcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHhhhcCCceecCCCccchhhhHHHHHhhhhe
Q 012151 327 AEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMCEGVPMICQPYLPDQMVNARYVSHFWRV 406 (470)
Q Consensus 327 ~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~ 406 (470)
.+.+|+++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.||+++++.+|+
T Consensus 312 ---~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~ 388 (456)
T 2c1x_A 312 ---RVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEI 388 (456)
T ss_dssp ---GGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCC
T ss_pred ---hhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCe
Confidence 22378888888889999999999999999999999999999999999999999999999999999999999993499
Q ss_pred eEEcCC-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 012151 407 GLHSEW-KLERMEIERAIRRVMVEAEGQEMRARIMHLKEKVDFCLRKGGSSHQSLERLIDHILS 469 (470)
Q Consensus 407 G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 469 (470)
|+.++. .+++++|.++|+++|+|++|++||+||+++++.+++++.+||+|.++++++++.+++
T Consensus 389 g~~l~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 389 GVRIEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 452 (456)
T ss_dssp EEECGGGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTS
T ss_pred EEEecCCCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHh
Confidence 999987 799999999999999985556999999999999999999999999999999998864
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=1.7e-58 Score=467.50 Aligned_cols=429 Identities=26% Similarity=0.422 Sum_probs=326.1
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCCc-----ccccccCCCCCeeEEecCCC-CCCCccccc
Q 012151 14 NGRRVILFPLPFQGHINPMLHLASILYSK--GFSVTIIHTDFNFS-----STNYFSCNYPHFDFHSFPDG-FSETEASVE 85 (470)
Q Consensus 14 ~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~V~~~~~~~~~~-----~~~~~~~~~~gi~~~~~~~~-~~~~~~~~~ 85 (470)
+++||+++|+|++||++|+++||+.|++| ||+|||++++.... .+..+.....+++|+.+|++ ++. .+...
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~-~~~~~ 86 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPP-QELLK 86 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCCC-GGGGG
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCCCCc-ccccC
Confidence 35799999999999999999999999999 99999999986532 11111112368999999975 332 11111
Q ss_pred CHHHHHHHHHhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCccchHHHHhhcCCCeEEEecccHHHHHHHHhchh
Q 012151 86 DVAVFFTAINGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFWFFTHTVAADFKLPTIVLQTCGVSGFLAFTAYPI 165 (470)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~~~~~~vA~~~giP~v~~~~~~~~~~~~~~~~~~ 165 (470)
+....+......+.+.++++++++ . . .+||+||+|.++.|+..+|+++|||++.++++++.....+.+++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~ll~~~-~--~------~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~ 157 (463)
T 2acv_A 87 SPEFYILTFLESLIPHVKATIKTI-L--S------NKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKN 157 (463)
T ss_dssp SHHHHHHHHHHHTHHHHHHHHHHH-C--C------TTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGG
T ss_pred CccHHHHHHHHhhhHHHHHHHHhc-c--C------CCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHh
Confidence 221113333345666777777776 1 1 489999999988999999999999999999998887766655443
Q ss_pred hhhccCCCCCCCCCC---cccCCCC-CCCCccccCcccccCchhHHHHHHHHHhhhccccEEEEcChHHhhHHHHHHHhh
Q 012151 166 LRERAYLPVQDHQSL---ETPVTEF-PPLRVKDIQVLETMDQENVYRFVSAIDTQIMASSGVIWNSYRDLEQAGLGLAHQ 241 (470)
Q Consensus 166 ~~~~~~~p~~~~~~~---~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~p~~~~~~~ 241 (470)
.... .+..+ ... ...+|++ ++++..+++.....+ ...+..+............+++||+++||.+.+..+ +
T Consensus 158 ~~~~--~~~~~-~~~~~~~~~~pg~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l-~ 232 (463)
T 2acv_A 158 RQIE--EVFDD-SDRDHQLLNIPGISNQVPSNVLPDACFNK-DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDAL-Y 232 (463)
T ss_dssp SCTT--CCCCC-SSGGGCEECCTTCSSCEEGGGSCHHHHCT-TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHH-H
T ss_pred hccc--CCCCC-ccccCceeECCCCCCCCChHHCchhhcCC-chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHH-H
Confidence 2100 11111 011 2245666 555555554332222 234444445555567788899999999999877666 5
Q ss_pred ccC--CCCeeeeccCCCCCCCCCCC-CCccchhhhhhhcCCCCCCeEEEEEcCccc-ccCHHHHHHHHHHHHhCCCCEEE
Q 012151 242 KYL--SIPIFPIGPLHKCSPASSGS-LSSQDYQRSISWLDKQTPKSVVYISFGSVI-AINKDGFLEIAWGVANSRMPFLW 317 (470)
Q Consensus 242 ~~~--~~~v~~vGpl~~~~~~~~~~-~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~-~~~~~~~~~i~~al~~~~~~~i~ 317 (470)
... ++++++|||+.......... .++.+ .++.+|++.++++++|||||||+. ..+.+++..++.+|+..+.++||
T Consensus 233 ~~~~p~~~v~~vGpl~~~~~~~~~~~~~~~~-~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~ 311 (463)
T 2acv_A 233 DHDEKIPPIYAVGPLLDLKGQPNPKLDQAQH-DLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLW 311 (463)
T ss_dssp HHCTTSCCEEECCCCCCSSCCCBTTBCHHHH-HHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred hccccCCcEEEeCCCcccccccccccccccc-hhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEE
Confidence 533 47899999998653100000 00222 468999998888899999999999 77888999999999999999999
Q ss_pred EEcCCCCCCCcccCCCchhHHHHh--cCCceeeeccChHhhhccCCcceeecccCchhhHHhhhcCCceecCCCccchhh
Q 012151 318 VVRPGLVSGAEWVEPLPKGFLEML--DGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMCEGVPMICQPYLPDQMV 395 (470)
Q Consensus 318 ~~~~~~~~~~~~~~~~p~~~~~~~--~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~ 395 (470)
+++.+ .+.+|+++.++. ++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.
T Consensus 312 ~~~~~-------~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~ 384 (463)
T 2acv_A 312 SNSAE-------KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQL 384 (463)
T ss_dssp ECCCC-------GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHH
T ss_pred EECCC-------cccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHH
Confidence 99653 013778887777 889999999999999999999999999999999999999999999999999999
Q ss_pred hHHHH-HhhhheeEEc-C----C--cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 012151 396 NARYV-SHFWRVGLHS-E----W--KLERMEIERAIRRVMVEAEGQEMRARIMHLKEKVDFCLRKGGSSHQSLERLIDHI 467 (470)
Q Consensus 396 na~rv-~~~~G~G~~l-~----~--~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~l 467 (470)
||+++ ++ +|+|+.+ + . .+++++|.++|+++|++ +++||+||+++++++++++.+||+|.+++++|++++
T Consensus 385 Na~~lv~~-~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~--~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~ 461 (463)
T 2acv_A 385 NAFRLVKE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDK--DSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDI 461 (463)
T ss_dssp HHHHHHHT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCT--TCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHH-cCeEEEEecccCCCCccccHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHh
Confidence 99995 78 6999999 3 2 48999999999999962 178999999999999999999999999999999998
Q ss_pred H
Q 012151 468 L 468 (470)
Q Consensus 468 ~ 468 (470)
+
T Consensus 462 ~ 462 (463)
T 2acv_A 462 T 462 (463)
T ss_dssp H
T ss_pred c
Confidence 6
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=9.4e-46 Score=371.96 Aligned_cols=399 Identities=16% Similarity=0.194 Sum_probs=272.9
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccCCCCCeeEEecCCCCCCCccc----ccCHHHH
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTNYFSCNYPHFDFHSFPDGFSETEAS----VEDVAVF 90 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~----~~~~~~~ 90 (470)
.+||++++++++||++|+++||++|+++||+|+|++++.+.+.+.. .|++|++++..++.+... ..+....
T Consensus 12 ~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (424)
T 2iya_A 12 PRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKA-----AGATPVVYDSILPKESNPEESWPEDQESA 86 (424)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-----HTCEEEECCCCSCCTTCTTCCCCSSHHHH
T ss_pred cceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHh-----CCCEEEecCccccccccchhhcchhHHHH
Confidence 4689999999999999999999999999999999999877666665 689999998765543211 1233333
Q ss_pred HHHHHhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCccchHHHHhhcCCCeEEEecccHHHHHHHHhchhhhhcc
Q 012151 91 FTAINGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFWFFTHTVAADFKLPTIVLQTCGVSGFLAFTAYPILRERA 170 (470)
Q Consensus 91 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~~~~~~vA~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~ 170 (470)
+..+...+...+.+ +.++++. .+||+||+|.+..++..+|+.+|||+|.+++.+..... ...........
T Consensus 87 ~~~~~~~~~~~~~~-l~~~l~~--------~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~-~~~~~~~~~~~ 156 (424)
T 2iya_A 87 MGLFLDEAVRVLPQ-LEDAYAD--------DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEG-FEEDVPAVQDP 156 (424)
T ss_dssp HHHHHHHHHHHHHH-HHHHTTT--------SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTT-HHHHSGGGSCC
T ss_pred HHHHHHHHHHHHHH-HHHHHhc--------cCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccc-ccccccccccc
Confidence 33333222222222 3333322 58999999988889999999999999999876541110 00000000000
Q ss_pred CCCCCCCCCCcccCCCCCCCCccccCcccccCchhHHHHHHH------HHhhhccccEEEEcChHHhhHHHHHHHhhccC
Q 012151 171 YLPVQDHQSLETPVTEFPPLRVKDIQVLETMDQENVYRFVSA------IDTQIMASSGVIWNSYRDLEQAGLGLAHQKYL 244 (470)
Q Consensus 171 ~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~s~~~le~p~~~~~~~~~~ 244 (470)
+..................+. ...+... .....+.+.... ........+.+++++.++|+++ ...+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~------~~~~ 228 (424)
T 2iya_A 157 TADRGEEAAAPAGTGDAEEGA-EAEDGLV-RFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK------GDTV 228 (424)
T ss_dssp CC----------------------HHHHH-HHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT------GGGC
T ss_pred ccccccccccccccccchhhh-ccchhHH-HHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC------ccCC
Confidence 000000000000000000000 0000000 000001111110 0111224678899999999976 5667
Q ss_pred CCCeeeeccCCCCCCCCCCCCCccchhhhhhhcCCCCCCeEEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEEcCCCC
Q 012151 245 SIPIFPIGPLHKCSPASSGSLSSQDYQRSISWLDKQTPKSVVYISFGSVIAINKDGFLEIAWGVANSRMPFLWVVRPGLV 324 (470)
Q Consensus 245 ~~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~ 324 (470)
++++++|||+.... .+ ..+|++..+++++||+++||......+.+..++++++..+.+++|+++.+..
T Consensus 229 ~~~~~~vGp~~~~~---------~~---~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~ 296 (424)
T 2iya_A 229 GDNYTFVGPTYGDR---------SH---QGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFVD 296 (424)
T ss_dssp CTTEEECCCCCCCC---------GG---GCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTSC
T ss_pred CCCEEEeCCCCCCc---------cc---CCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCcCC
Confidence 77899999976431 11 2357765567789999999998666788889999999988899888865321
Q ss_pred CCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHhhhcCCceecCCCccchhhhHHHHHhhh
Q 012151 325 SGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMCEGVPMICQPYLPDQMVNARYVSHFW 404 (470)
Q Consensus 325 ~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~ 404 (470)
. +.+ +..++|+++.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.||+++++ +
T Consensus 297 ~---------~~~-~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~ 363 (424)
T 2iya_A 297 P---------ADL-GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVE-L 363 (424)
T ss_dssp G---------GGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-T
T ss_pred h---------HHh-ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHH-C
Confidence 1 111 113466799999999999999988 99999999999999999999999999999999999999 6
Q ss_pred heeEEcCC-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 012151 405 RVGLHSEW-KLERMEIERAIRRVMVEAEGQEMRARIMHLKEKVDFCLRKGGSSHQSLERLIDHIL 468 (470)
Q Consensus 405 G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 468 (470)
|+|+.++. ++++++|.++|+++|+| ++++++++++++++++. ++..++++.|.+.++
T Consensus 364 g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~~~~ 421 (424)
T 2iya_A 364 GLGRHIPRDQVTAEKLREAVLAVASD---PGVAERLAAVRQEIREA----GGARAAADILEGILA 421 (424)
T ss_dssp TSEEECCGGGCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHTS----CHHHHHHHHHHHHHH
T ss_pred CCEEEcCcCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHhc----CcHHHHHHHHHHHHh
Confidence 99999987 78999999999999999 89999999999999876 788888887777654
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=3.4e-44 Score=357.68 Aligned_cols=359 Identities=16% Similarity=0.162 Sum_probs=235.0
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccCCCCCeeEEecCCCCCCCc-------c---c
Q 012151 14 NGRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTNYFSCNYPHFDFHSFPDGFSETE-------A---S 83 (470)
Q Consensus 14 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~-------~---~ 83 (470)
+.|||||+++|++||++|+++||++|++|||+|||++++.+..... .|+.+.++........ . .
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE------AGLCAVDVSPGVNYAKLFVPDDTDVTDP 94 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT------TTCEEEESSTTCCSHHHHSCCC------
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh------cCCeeEecCCchhHhhhccccccccccc
Confidence 5799999999999999999999999999999999999987766544 6888888764332211 0 0
Q ss_pred ----ccCHHHHHHHHHhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCccchHHHHhhcCCCeEEEecccHHHHHH
Q 012151 84 ----VEDVAVFFTAINGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFWFFTHTVAADFKLPTIVLQTCGVSGFLA 159 (470)
Q Consensus 84 ----~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~~~~~~vA~~~giP~v~~~~~~~~~~~~ 159 (470)
......+...+.......+.++++.+.. ++||+||+|.+.+++..+|+.+|||++.+...+......
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~ 165 (400)
T 4amg_A 95 MHSEGLGEGFFAEMFARVSAVAVDGALRTARS---------WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPG 165 (400)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHHH---------HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHH
T ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh---------cCCCEEEECcchHHHHHHHHHcCCCceeecccccccccc
Confidence 0011111111222222223333333322 489999999988999999999999999876543221111
Q ss_pred HHhchhhhhccCCCCCCCCCCcccCCCCCCCCccccCcccccCchhHHHHHHHHH-hhhccccEEEEcChHHhhHHHHHH
Q 012151 160 FTAYPILRERAYLPVQDHQSLETPVTEFPPLRVKDIQVLETMDQENVYRFVSAID-TQIMASSGVIWNSYRDLEQAGLGL 238 (470)
Q Consensus 160 ~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~s~~~le~p~~~~ 238 (470)
..... .... .+...... .........+....+.+.....
T Consensus 166 ~~~~~---~~~l-----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 205 (400)
T 4amg_A 166 LGALI---RRAM-----------------------------------SKDYERHGVTGEPTGSVRLTTTPPSVEALLP-- 205 (400)
T ss_dssp HHHHH---HHHT-----------------------------------HHHHHHTTCCCCCSCEEEEECCCHHHHHTSC--
T ss_pred hhhHH---HHHH-----------------------------------HHHHHHhCCCcccccchhhcccCchhhccCc--
Confidence 10000 0000 00000000 0001112222222222221100
Q ss_pred HhhccCCCCeeeeccCCCCCCCCCCCCCccchhhhhhhcCCCCCCeEEEEEcCcccccC--HHHHHHHHHHHHhCCCCEE
Q 012151 239 AHQKYLSIPIFPIGPLHKCSPASSGSLSSQDYQRSISWLDKQTPKSVVYISFGSVIAIN--KDGFLEIAWGVANSRMPFL 316 (470)
Q Consensus 239 ~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~~--~~~~~~i~~al~~~~~~~i 316 (470)
.....+....+.+.... .. ..+.+|++..+++++|||||||+.... .+.+..++++++..+.+++
T Consensus 206 --~~~~~~~~~~~~~~~~~--------~~---~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v 272 (400)
T 4amg_A 206 --EDRRSPGAWPMRYVPYN--------GG---AVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFV 272 (400)
T ss_dssp --GGGCCTTCEECCCCCCC--------CC---EECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEE
T ss_pred --ccccCCcccCccccccc--------cc---ccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEE
Confidence 00011223333332221 11 225568888888999999999987633 3678889999999999999
Q ss_pred EEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHhhhcCCceecCCCccchhhh
Q 012151 317 WVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMCEGVPMICQPYLPDQMVN 396 (470)
Q Consensus 317 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~n 396 (470)
|.+++..... ...+| +|+++.+|+||.++|+|+++ ||||||+||++||+++|||+|++|+..||+.|
T Consensus 273 ~~~~~~~~~~---~~~~~--------~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~n 339 (400)
T 4amg_A 273 LTLGGGDLAL---LGELP--------ANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTN 339 (400)
T ss_dssp EECCTTCCCC---CCCCC--------TTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHH
T ss_pred EEecCccccc---cccCC--------CCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHH
Confidence 9986653221 22344 45599999999999999888 99999999999999999999999999999999
Q ss_pred HHHHHhhhheeEEcCC-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 012151 397 ARYVSHFWRVGLHSEW-KLERMEIERAIRRVMVEAEGQEMRARIMHLKEKVDFCLRKGGSSHQSLERLID 465 (470)
Q Consensus 397 a~rv~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~ 465 (470)
|+++++ +|+|+.++. +++++ +|+++|+| ++||++|+++++++++. .+..++++.|++
T Consensus 340 a~~v~~-~G~g~~l~~~~~~~~----al~~lL~d---~~~r~~a~~l~~~~~~~----~~~~~~a~~le~ 397 (400)
T 4amg_A 340 RDVLTG-LGIGFDAEAGSLGAE----QCRRLLDD---AGLREAALRVRQEMSEM----PPPAETAAXLVA 397 (400)
T ss_dssp HHHHHH-HTSEEECCTTTCSHH----HHHHHHHC---HHHHHHHHHHHHHHHTS----CCHHHHHHHHHH
T ss_pred HHHHHH-CCCEEEcCCCCchHH----HHHHHHcC---HHHHHHHHHHHHHHHcC----CCHHHHHHHHHH
Confidence 999999 599999988 66654 67789999 99999999999999986 677777666654
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=3.1e-43 Score=352.52 Aligned_cols=380 Identities=15% Similarity=0.059 Sum_probs=256.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccCCCCCeeEEecCCCCCCCccc-ccCHHHHHHHH
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTNYFSCNYPHFDFHSFPDGFSETEAS-VEDVAVFFTAI 94 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~-~~~~~~~~~~~ 94 (470)
|||+|+++++.||++|+++||++|++|||+|+|++++...+.+.. .|++|+.++......... ...... .+
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~-----~g~~~~~i~~~~~~~~~~~~~~~~~---~~ 72 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAE-----VGVPHVPVGPSARAPIQRAKPLTAE---DV 72 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-----TTCCEEECCC-------CCSCCCHH---HH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHH-----cCCeeeeCCCCHHHHhhcccccchH---HH
Confidence 689999999999999999999999999999999999876666655 789999998543211100 111111 11
Q ss_pred HhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCC-Cccc--hHHHHhhcCCCeEEEecccHHHHHHHHhchhhhhccC
Q 012151 95 NGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDA-FWFF--THTVAADFKLPTIVLQTCGVSGFLAFTAYPILRERAY 171 (470)
Q Consensus 95 ~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~-~~~~--~~~vA~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~ 171 (470)
...+...+.+.++++.... .+||+||+|. +..+ +..+|+.+|||+|.+++++... ...+
T Consensus 73 ~~~~~~~~~~~~~~l~~~~-------~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~-----------~~~~ 134 (415)
T 1iir_A 73 RRFTTEAIATQFDEIPAAA-------EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYV-----------PSPY 134 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHT-------TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGS-----------CCSS
T ss_pred HHHHHHHHHHHHHHHHHHh-------cCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcC-----------CCcc
Confidence 1222223344455554321 4899999997 5678 8999999999999988764321 0112
Q ss_pred CCCCCCCCCcccCCCCCCCCccccCcc-cc-cCchhHHHHHHHHH------------hhhccccEEEEcChHHhhH-HHH
Q 012151 172 LPVQDHQSLETPVTEFPPLRVKDIQVL-ET-MDQENVYRFVSAID------------TQIMASSGVIWNSYRDLEQ-AGL 236 (470)
Q Consensus 172 ~p~~~~~~~~~~i~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~------------~~~~~~~~~l~~s~~~le~-p~~ 236 (470)
.|... .. ..+++ ......+... .. ..+..+........ +..... .++++++++|++ +
T Consensus 135 ~p~~~-~~--~~~~~--~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~-- 206 (415)
T 1iir_A 135 YPPPP-LG--EPSTQ--DTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQ-- 206 (415)
T ss_dssp SCCCC--------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCC--
T ss_pred cCCcc-CC--ccccc--hHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCCC--
Confidence 22111 00 00000 0000000000 00 00000000011111 111122 679999999987 5
Q ss_pred HHHhhccCCCCeeeeccCCCCCCCCCCCCCccchhhhhhhcCCCCCCeEEEEEcCcccccCHHHHHHHHHHHHhCCCCEE
Q 012151 237 GLAHQKYLSIPIFPIGPLHKCSPASSGSLSSQDYQRSISWLDKQTPKSVVYISFGSVIAINKDGFLEIAWGVANSRMPFL 316 (470)
Q Consensus 237 ~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i 316 (470)
++.+ ++++|||+..... ...+ .++.+|++.. +++||+++||+. ...+.+..++++++..+.+++
T Consensus 207 ----~~~~--~~~~vG~~~~~~~----~~~~---~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v 270 (415)
T 1iir_A 207 ----PTDL--DAVQTGAWILPDE----RPLS---PELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVI 270 (415)
T ss_dssp ----CCSS--CCEECCCCCCCCC----CCCC---HHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTTCCEE
T ss_pred ----cccC--CeEeeCCCccCcc----cCCC---HHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEE
Confidence 5544 7999999987521 1223 4488999743 479999999997 567788889999999999999
Q ss_pred EEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHhhhcCCceecCCCccchhhh
Q 012151 317 WVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMCEGVPMICQPYLPDQMVN 396 (470)
Q Consensus 317 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~n 396 (470)
|+++.+... ...++ +|+++.+|+||.++|+.+++ ||||||+||++||+++|||+|++|...||+.|
T Consensus 271 ~~~g~~~~~----~~~~~--------~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~n 336 (415)
T 1iir_A 271 LSRGWADLV----LPDDG--------ADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYY 336 (415)
T ss_dssp ECTTCTTCC----CSSCG--------GGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHH
T ss_pred EEeCCCccc----ccCCC--------CCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCCccHHH
Confidence 988654211 11233 45589999999999966666 99999999999999999999999999999999
Q ss_pred HHHHHhhhheeEEcCC-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 012151 397 ARYVSHFWRVGLHSEW-KLERMEIERAIRRVMVEAEGQEMRARIMHLKEKVDFCLRKGGSSHQSLERLIDHIL 468 (470)
Q Consensus 397 a~rv~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 468 (470)
|+++++ .|+|+.++. ++++++|.++|+++ +| ++|++++++++++++.. ++..++++.+.+.++
T Consensus 337 a~~l~~-~g~g~~~~~~~~~~~~l~~~i~~l-~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~~~~ 400 (415)
T 1iir_A 337 AGRVAE-LGVGVAHDGPIPTFDSLSAALATA-LT---PETHARATAVAGTIRTD----GAAVAARLLLDAVSR 400 (415)
T ss_dssp HHHHHH-HTSEEECSSSSCCHHHHHHHHHHH-TS---HHHHHHHHHHHHHSCSC----HHHHHHHHHHHHHHT
T ss_pred HHHHHH-CCCcccCCcCCCCHHHHHHHHHHH-cC---HHHHHHHHHHHHHHhhc----ChHHHHHHHHHHHHh
Confidence 999999 599999987 78999999999999 98 89999999999988753 566666666655443
No 9
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=4.3e-41 Score=336.99 Aligned_cols=385 Identities=14% Similarity=0.131 Sum_probs=269.4
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccCCCCCeeEEecCCCCCCCccc----ccCHHH
Q 012151 14 NGRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTNYFSCNYPHFDFHSFPDGFSETEAS----VEDVAV 89 (470)
Q Consensus 14 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~----~~~~~~ 89 (470)
+.+||+|+++++.||++|+++||++|+++||+|++++++.+.+.+.. .|+.+..++..++..... ..+...
T Consensus 19 ~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~-----~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (415)
T 3rsc_A 19 HMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRA-----AGATVVPYQSEIIDADAAEVFGSDDLGV 93 (415)
T ss_dssp CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH-----TTCEEEECCCSTTTCCHHHHHHSSSSCH
T ss_pred cCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHh-----cCCEEEeccccccccccchhhccccHHH
Confidence 35789999999999999999999999999999999998877777766 789999998654432110 001111
Q ss_pred HHHH-HHhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeC-CCccchHHHHhhcCCCeEEEecccHHHHHHHHhchhhh
Q 012151 90 FFTA-INGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITD-AFWFFTHTVAADFKLPTIVLQTCGVSGFLAFTAYPILR 167 (470)
Q Consensus 90 ~~~~-~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D-~~~~~~~~vA~~~giP~v~~~~~~~~~~~~~~~~~~~~ 167 (470)
.+.. +.......+.++.+.+.+ ++||+||+| ...+++..+|+.+|||++.+.+....... +...+...
T Consensus 94 ~~~~~~~~~~~~~~~~l~~~l~~---------~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~~~ 163 (415)
T 3rsc_A 94 RPHLMYLRENVSVLRATAEALDG---------DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEH-YSFSQDMV 163 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSS---------SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSS-CCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc---------cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCc-cccccccc
Confidence 1222 222222233333333322 599999999 77788999999999999998754321000 00000000
Q ss_pred hccCCCCCCCCCCcccCCCCCCCCccccCcccccCchhHHHHHH---HHHhhhccc-cEEEEcChHHhhHHHHHHHhhcc
Q 012151 168 ERAYLPVQDHQSLETPVTEFPPLRVKDIQVLETMDQENVYRFVS---AIDTQIMAS-SGVIWNSYRDLEQAGLGLAHQKY 243 (470)
Q Consensus 168 ~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~l~~s~~~le~p~~~~~~~~~ 243 (470)
+... .. .+. ...........+..... ......... +..+....+.++++ +..
T Consensus 164 ~~~~-~~------------~p~-----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~------~~~ 219 (415)
T 3rsc_A 164 TLAG-TI------------DPL-----DLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA------GDT 219 (415)
T ss_dssp HHHT-CC------------CGG-----GCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT------GGG
T ss_pred cccc-cC------------Chh-----hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC------ccc
Confidence 0000 00 000 00000000000000000 001111222 67788888888876 666
Q ss_pred CCCCeeeeccCCCCCCCCCCCCCccchhhhhhhcCCCCCCeEEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEEcCCC
Q 012151 244 LSIPIFPIGPLHKCSPASSGSLSSQDYQRSISWLDKQTPKSVVYISFGSVIAINKDGFLEIAWGVANSRMPFLWVVRPGL 323 (470)
Q Consensus 244 ~~~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~ 323 (470)
++.++.++||+.... .+ ..+|....+++++||+++||......+.+..+++++++.+.+++|.++.+.
T Consensus 220 ~~~~~~~vGp~~~~~---------~~---~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~ 287 (415)
T 3rsc_A 220 FDDRFVFVGPCFDDR---------RF---LGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQV 287 (415)
T ss_dssp CCTTEEECCCCCCCC---------GG---GCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTTS
T ss_pred CCCceEEeCCCCCCc---------cc---CcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCCC
Confidence 777899999987541 11 344665556778999999999876778899999999999988888876532
Q ss_pred CCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHhhhcCCceecCCCccchhhhHHHHHhh
Q 012151 324 VSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMCEGVPMICQPYLPDQMVNARYVSHF 403 (470)
Q Consensus 324 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~ 403 (470)
.. +..+.+ ++|+++.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||+.||+++++
T Consensus 288 ~~--~~l~~~--------~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~- 354 (415)
T 3rsc_A 288 DP--AALGDL--------PPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQ- 354 (415)
T ss_dssp CG--GGGCCC--------CTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHH-
T ss_pred Ch--HHhcCC--------CCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHH-
Confidence 11 001122 456699999999999999888 99999999999999999999999999999999999999
Q ss_pred hheeEEcCC-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 012151 404 WRVGLHSEW-KLERMEIERAIRRVMVEAEGQEMRARIMHLKEKVDFCLRKGGSSHQSLERLIDHILS 469 (470)
Q Consensus 404 ~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 469 (470)
.|+|+.+.. ++++++|.++|+++++| ++++++++++++.+.+. ++..++++.|.+.+.+
T Consensus 355 ~g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 355 LGLGAVLPGEKADGDTLLAAVGAVAAD---PALLARVEAMRGHVRRA----GGAARAADAVEAYLAR 414 (415)
T ss_dssp HTCEEECCGGGCCHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHS----CHHHHHHHHHHHHHHH
T ss_pred cCCEEEcccCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHhhc
Confidence 599999988 78999999999999999 99999999999999886 8888888888877654
No 10
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=5e-42 Score=343.93 Aligned_cols=374 Identities=13% Similarity=0.011 Sum_probs=256.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccCCCCCeeEEecCCCCCCCcc--cccCHHHHHHH
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTNYFSCNYPHFDFHSFPDGFSETEA--SVEDVAVFFTA 93 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~--~~~~~~~~~~~ 93 (470)
|||++++.++.||++|+++||++|+++||+|+|++++...+.+.. .|++|++++........ ........+..
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAE-----VGVPHVPVGLPQHMMLQEGMPPPPPEEEQR 75 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-----HTCCEEECSCCGGGCCCTTSCCCCHHHHHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH-----cCCeeeecCCCHHHHHhhccccchhHHHHH
Confidence 689999999999999999999999999999999999876666655 68999998854221100 00111111111
Q ss_pred HHhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCC-Cccc--hHHHHhhcCCCeEEEecccHHHHHHHHhchhhhhcc
Q 012151 94 INGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDA-FWFF--THTVAADFKLPTIVLQTCGVSGFLAFTAYPILRERA 170 (470)
Q Consensus 94 ~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~-~~~~--~~~vA~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~ 170 (470)
+ ....+.+.++.+.... .+||+||+|. +.++ +..+|+.+|||++.+++++... ...
T Consensus 76 ~---~~~~~~~~~~~l~~~~-------~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~-----------~~~ 134 (416)
T 1rrv_A 76 L---AAMTVEMQFDAVPGAA-------EGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYL-----------ASP 134 (416)
T ss_dssp H---HHHHHHHHHHHHHHHT-------TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGS-----------CCS
T ss_pred H---HHHHHHHHHHHHHHHh-------cCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCC-----------CCc
Confidence 1 1122233444443211 4899999996 3467 8899999999999987764221 011
Q ss_pred CCCCCCCCCCcccCCCCCC-CCccccCcccc-cCchhHHHHHHH------------HHhhhccccEEEEcChHHhhHHHH
Q 012151 171 YLPVQDHQSLETPVTEFPP-LRVKDIQVLET-MDQENVYRFVSA------------IDTQIMASSGVIWNSYRDLEQAGL 236 (470)
Q Consensus 171 ~~p~~~~~~~~~~i~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~------------~~~~~~~~~~~l~~s~~~le~p~~ 236 (470)
+.| .. .. ++..+. ........... ..+..+...... ..+..... .++++++++++++
T Consensus 135 ~~p-~~---~~--~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~-- 205 (416)
T 1rrv_A 135 HLP-PA---YD--EPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL-- 205 (416)
T ss_dssp SSC-CC---BC--SCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC--
T ss_pred ccC-CC---CC--CCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCC--
Confidence 112 00 00 000000 11000000000 000000000001 11112233 6899999999875
Q ss_pred HHHhhccCCCCeeeeccCCCCCCCCCCCCCccchhhhhhhcCCCCCCeEEEEEcCcccc-cCHHHHHHHHHHHHhCCCCE
Q 012151 237 GLAHQKYLSIPIFPIGPLHKCSPASSGSLSSQDYQRSISWLDKQTPKSVVYISFGSVIA-INKDGFLEIAWGVANSRMPF 315 (470)
Q Consensus 237 ~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~-~~~~~~~~i~~al~~~~~~~ 315 (470)
++.+ ++++|||+..+.. ...+ .++.+|++.. +++|||++||+.. ...+.+..++++++..+.++
T Consensus 206 ----~~~~--~~~~vG~~~~~~~----~~~~---~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~ 270 (416)
T 1rrv_A 206 ----QPDV--DAVQTGAWLLSDE----RPLP---PELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRV 270 (416)
T ss_dssp ----CSSC--CCEECCCCCCCCC----CCCC---HHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCE
T ss_pred ----CCCC--CeeeECCCccCcc----CCCC---HHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCCCeE
Confidence 5443 7999999987521 1223 4488999743 4789999999964 45677888999999999999
Q ss_pred EEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHhhhcCCceecCCCccchhh
Q 012151 316 LWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMCEGVPMICQPYLPDQMV 395 (470)
Q Consensus 316 i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~ 395 (470)
+|+++.+... ...+ ++|+++++|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.
T Consensus 271 v~~~g~~~~~----~~~~--------~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~ 336 (416)
T 1rrv_A 271 ILSRGWTELV----LPDD--------RDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPY 336 (416)
T ss_dssp EEECTTTTCC----CSCC--------CTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHH
T ss_pred EEEeCCcccc----ccCC--------CCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCCCcHH
Confidence 9998764211 0112 456689999999999977777 9999999999999999999999999999999
Q ss_pred hHHHHHhhhheeEEcCC-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 012151 396 NARYVSHFWRVGLHSEW-KLERMEIERAIRRVMVEAEGQEMRARIMHLKEKVDFCLRKGGSSHQSLERL 463 (470)
Q Consensus 396 na~rv~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~ 463 (470)
||+++++ .|+|+.++. ++++++|.++|+++ +| ++|+++++++++++++. ++. ++++.+
T Consensus 337 na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~l-~~---~~~~~~~~~~~~~~~~~----~~~-~~~~~i 395 (416)
T 1rrv_A 337 FAGRVAA-LGIGVAHDGPTPTFESLSAALTTV-LA---PETRARAEAVAGMVLTD----GAA-AAADLV 395 (416)
T ss_dssp HHHHHHH-HTSEEECSSSCCCHHHHHHHHHHH-TS---HHHHHHHHHHTTTCCCC----HHH-HHHHHH
T ss_pred HHHHHHH-CCCccCCCCCCCCHHHHHHHHHHh-hC---HHHHHHHHHHHHHHhhc----CcH-HHHHHH
Confidence 9999999 599999987 78999999999999 98 89999999999888754 566 777666
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=5.1e-40 Score=327.58 Aligned_cols=375 Identities=17% Similarity=0.195 Sum_probs=265.9
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccCCCCCeeEEecCCCCCCCc----ccccCHHHHH
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTNYFSCNYPHFDFHSFPDGFSETE----ASVEDVAVFF 91 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~----~~~~~~~~~~ 91 (470)
+||+|+++++.||++|++.||++|+++||+|++++++.+.+.+.. .|+.+..++..++... ....+....+
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~-----~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKA-----AGAEVVLYKSEFDTFHVPEVVKQEDAETQL 79 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH-----TTCEEEECCCGGGTSSSSSSSCCTTHHHHH
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHH-----cCCEEEecccccccccccccccccchHHHH
Confidence 389999999999999999999999999999999999776666665 7899999985433211 1112333333
Q ss_pred HH-HHhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeC-CCccchHHHHhhcCCCeEEEecccHHHHHHHHhchhhhhc
Q 012151 92 TA-INGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITD-AFWFFTHTVAADFKLPTIVLQTCGVSGFLAFTAYPILRER 169 (470)
Q Consensus 92 ~~-~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D-~~~~~~~~vA~~~giP~v~~~~~~~~~~~~~~~~~~~~~~ 169 (470)
.. +.......+.++.+.+.+ ++||+||+| ...+++..+|+.+|||+|.+.+......... ..+...+.
T Consensus 80 ~~~~~~~~~~~~~~l~~~l~~---------~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~-~~~~~~~~ 149 (402)
T 3ia7_A 80 HLVYVRENVAILRAAEEALGD---------NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYS-LFKELWKS 149 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT---------CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBC-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc---------cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcccc-cccccccc
Confidence 33 333333333344443332 599999999 7778899999999999999875432100000 00000000
Q ss_pred cCCCCCCCCCCcccCCCCCCCCccccCcccccCchhHHHHHHHH----------Hhhhccc-cEEEEcChHHhhHHHHHH
Q 012151 170 AYLPVQDHQSLETPVTEFPPLRVKDIQVLETMDQENVYRFVSAI----------DTQIMAS-SGVIWNSYRDLEQAGLGL 238 (470)
Q Consensus 170 ~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~-~~~l~~s~~~le~p~~~~ 238 (470)
.. .. . + . ....+...+... ....... +..+....++++++
T Consensus 150 ~~-~~-~--------~---~------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~---- 200 (402)
T 3ia7_A 150 NG-QR-H--------P---A------------DVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPF---- 200 (402)
T ss_dssp HT-CC-C--------G---G------------GSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTT----
T ss_pred cc-cc-C--------h---h------------hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCc----
Confidence 00 00 0 0 0 000000111100 0111112 66777788888876
Q ss_pred HhhccCCCCeeeeccCCCCCCCCCCCCCccchhhhhhhcCCCCCCeEEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEE
Q 012151 239 AHQKYLSIPIFPIGPLHKCSPASSGSLSSQDYQRSISWLDKQTPKSVVYISFGSVIAINKDGFLEIAWGVANSRMPFLWV 318 (470)
Q Consensus 239 ~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~ 318 (470)
...++.++.++||+..... + ..+|+...+++++||+++||......+.+..++++++..+.++++.
T Consensus 201 --~~~~~~~~~~vGp~~~~~~---------~---~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (402)
T 3ia7_A 201 --AETFDERFAFVGPTLTGRD---------G---QPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMA 266 (402)
T ss_dssp --GGGCCTTEEECCCCCCC----------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEE
T ss_pred --cccCCCCeEEeCCCCCCcc---------c---CCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEE
Confidence 6667778999999875421 1 2345554567789999999998777778999999999988888888
Q ss_pred EcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHhhhcCCceecCCC-ccchhhhH
Q 012151 319 VRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMCEGVPMICQPY-LPDQMVNA 397 (470)
Q Consensus 319 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~-~~DQ~~na 397 (470)
++.+... +..+. .++|+++.+|+|+.++|+++++ +|||||.||++||+++|+|+|++|. ..||+.||
T Consensus 267 ~g~~~~~--~~~~~--------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a 334 (402)
T 3ia7_A 267 IGGFLDP--AVLGP--------LPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSA 334 (402)
T ss_dssp CCTTSCG--GGGCS--------CCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHH
T ss_pred eCCcCCh--hhhCC--------CCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHH
Confidence 7653211 00111 3456699999999999999888 9999999999999999999999999 99999999
Q ss_pred HHHHhhhheeEEcCC-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 012151 398 RYVSHFWRVGLHSEW-KLERMEIERAIRRVMVEAEGQEMRARIMHLKEKVDFCLRKGGSSHQSLERLIDHIL 468 (470)
Q Consensus 398 ~rv~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 468 (470)
.++++ .|+|..+.. +++++.|.++|+++++| ++++++++++++++.+. +++.++++.+.+.++
T Consensus 335 ~~~~~-~g~g~~~~~~~~~~~~l~~~~~~ll~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~~~~ 398 (402)
T 3ia7_A 335 ERVIE-LGLGSVLRPDQLEPASIREAVERLAAD---SAVRERVRRMQRDILSS----GGPARAADEVEAYLG 398 (402)
T ss_dssp HHHHH-TTSEEECCGGGCSHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHTS----CHHHHHHHHHHHHHH
T ss_pred HHHHH-cCCEEEccCCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHhhC----ChHHHHHHHHHHHHh
Confidence 99999 599999988 78999999999999999 99999999999998875 778888888777664
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=1e-40 Score=332.83 Aligned_cols=374 Identities=13% Similarity=0.053 Sum_probs=252.0
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccCCCCCeeEEecCCCCCCCc-ccccCHHHHHHHH
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTNYFSCNYPHFDFHSFPDGFSETE-ASVEDVAVFFTAI 94 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~-~~~~~~~~~~~~~ 94 (470)
|||+|++.++.||++|+++||++|+++||+|+|++++...+.+.. .|+.|.+++....... ............+
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~-----~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 75 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAE-----VGVPMVPVGRAVRAGAREPGELPPGAAEVV 75 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHH-----TTCCEEECSSCSSGGGSCTTCCCTTCGGGH
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH-----cCCceeecCCCHHHHhccccCCHHHHHHHH
Confidence 589999999999999999999999999999999999887777776 8999999974432110 0000000011111
Q ss_pred HhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCccch---HHHHhhcCCCeEEEecccHHHHHHHHh-chhhhhcc
Q 012151 95 NGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFWFFT---HTVAADFKLPTIVLQTCGVSGFLAFTA-YPILRERA 170 (470)
Q Consensus 95 ~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~~~~---~~vA~~~giP~v~~~~~~~~~~~~~~~-~~~~~~~~ 170 (470)
. ..+.+.++.+.+.. .+||+||+|.....+ ..+|+.+|||++.+..++......... .....+..
T Consensus 76 ~----~~~~~~~~~l~~~~-------~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~~~~~~~ 144 (404)
T 3h4t_A 76 T----EVVAEWFDKVPAAI-------EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQG 144 (404)
T ss_dssp H----HHHHHHHHHHHHHH-------TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHHHHH
T ss_pred H----HHHHHHHHHHHHHh-------cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHHHHHHHH
Confidence 1 11222222222211 379999998665444 789999999999887765421000000 00000000
Q ss_pred C-CCCCCC-CCCcccCCCCCCCCccccCcccccCchhHHHHHHHHHhhhccccEEEEcChHHhhHHHHHHHhhccCCCCe
Q 012151 171 Y-LPVQDH-QSLETPVTEFPPLRVKDIQVLETMDQENVYRFVSAIDTQIMASSGVIWNSYRDLEQAGLGLAHQKYLSIPI 248 (470)
Q Consensus 171 ~-~p~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~p~~~~~~~~~~~~~v 248 (470)
. .+.... ..+... -++++.. .. .+. ...+..+.+..+.+.+. + .+++++
T Consensus 145 ~~~~~~~~~~~~~~~-lgl~~~~-------------~~-------~~~-~~~~~~l~~~~~~l~p~------~-~~~~~~ 195 (404)
T 3h4t_A 145 ADRLFGDAVNSHRAS-IGLPPVE-------------HL-------YDY-GYTDQPWLAADPVLSPL------R-PTDLGT 195 (404)
T ss_dssp HHHHHHHHHHHHHHH-TTCCCCC-------------CH-------HHH-HHCSSCEECSCTTTSCC------C-TTCCSC
T ss_pred HHHHhHHHHHHHHHH-cCCCCCc-------------ch-------hhc-cccCCeEEeeCcceeCC------C-CCCCCe
Confidence 0 000000 000000 0000000 00 000 00122355666766543 3 355679
Q ss_pred eeeccCCCCCCCCCCCCCccchhhhhhhcCCCCCCeEEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCc
Q 012151 249 FPIGPLHKCSPASSGSLSSQDYQRSISWLDKQTPKSVVYISFGSVIAINKDGFLEIAWGVANSRMPFLWVVRPGLVSGAE 328 (470)
Q Consensus 249 ~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~ 328 (470)
+++|++..+.. ...+++ +.+|++ +++++|||++||+.. ..+.+..++++++..+.++||+++......
T Consensus 196 ~~~G~~~~~~~----~~~~~~---l~~~l~--~~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~~~~-- 263 (404)
T 3h4t_A 196 VQTGAWILPDQ----RPLSAE---LEGFLR--AGSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAGLGR-- 263 (404)
T ss_dssp CBCCCCCCCCC----CCCCHH---HHHHHH--TSSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTTCCC--
T ss_pred EEeCccccCCC----CCCCHH---HHHHHh--cCCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCccccc--
Confidence 99998876522 234444 888987 346799999999987 677899999999999999999987643111
Q ss_pred ccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHhhhcCCceecCCCccchhhhHHHHHhhhheeE
Q 012151 329 WVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMCEGVPMICQPYLPDQMVNARYVSHFWRVGL 408 (470)
Q Consensus 329 ~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~ 408 (470)
... ++|+++.+|+||.++|+++++ ||||||+||+.||+++|||+|++|+..||+.||+++++ .|+|.
T Consensus 264 --~~~--------~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~-~G~g~ 330 (404)
T 3h4t_A 264 --IDE--------GDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVAD-LGVGV 330 (404)
T ss_dssp --SSC--------CTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-HTSEE
T ss_pred --ccC--------CCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHH-CCCEe
Confidence 012 456699999999999988777 99999999999999999999999999999999999999 59999
Q ss_pred EcCC-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 012151 409 HSEW-KLERMEIERAIRRVMVEAEGQEMRARIMHLKEKVDFCLRKGGSSHQSLERLIDHIL 468 (470)
Q Consensus 409 ~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 468 (470)
.++. +++++.|.++|+++++ ++|+++++++++.+.+ .+..++++.|++.++
T Consensus 331 ~l~~~~~~~~~l~~ai~~ll~----~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 331 AHDGPTPTVESLSAALATALT----PGIRARAAAVAGTIRT-----DGTTVAAKLLLEAIS 382 (404)
T ss_dssp ECSSSSCCHHHHHHHHHHHTS----HHHHHHHHHHHTTCCC-----CHHHHHHHHHHHHHH
T ss_pred ccCcCCCCHHHHHHHHHHHhC----HHHHHHHHHHHHHHhh-----hHHHHHHHHHHHHHh
Confidence 9987 7899999999999997 5799999999887764 677777777777664
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=2.9e-39 Score=326.25 Aligned_cols=372 Identities=13% Similarity=0.070 Sum_probs=247.9
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccCCCCCeeEEecCCCCCC-Ccc----------
Q 012151 14 NGRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTNYFSCNYPHFDFHSFPDGFSE-TEA---------- 82 (470)
Q Consensus 14 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~-~~~---------- 82 (470)
..|||+|++.++.||++|+++||++|+++||+|+|++++...+.+.. .|+.|++++...+. +..
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~-----~G~~~~~i~~~~~~~~~~~~~~~~~~~~ 93 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITA-----AGLTAVPVGTDVDLVDFMTHAGHDIIDY 93 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHT-----TTCCEEECSCCCCHHHHHHHTTHHHHHH
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHh-----CCCceeecCCccchHHHhhhhhcccccc
Confidence 35789999999999999999999999999999999999877666655 78999999854311 000
Q ss_pred ----------cc-cCHH---HHHHHHHhhcc-----h-HHHHHHHHHHhcccCCCCCCCCCcEEEeCCCccchHHHHhhc
Q 012151 83 ----------SV-EDVA---VFFTAINGKCI-----M-PFRDCLAEILMKSKADQNKDSSPCCLITDAFWFFTHTVAADF 142 (470)
Q Consensus 83 ----------~~-~~~~---~~~~~~~~~~~-----~-~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~~~~~~vA~~~ 142 (470)
.. .... ..+..+...+. . .+.++++.+.+ ++||+||+|...+++..+|+.+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~~pDlVv~d~~~~~~~~aA~~l 164 (441)
T 2yjn_A 94 VRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK---------WRPDLVIWEPLTFAAPIAAAVT 164 (441)
T ss_dssp HTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH---------HCCSEEEECTTCTHHHHHHHHH
T ss_pred cccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh---------cCCCEEEecCcchhHHHHHHHc
Confidence 00 0111 11111221111 2 44444443332 4899999998778899999999
Q ss_pred CCCeEEEecccHHHHHHHHhchhhhhccCCCCCCCCCCcccCCCCCCCCccccCcccccCchhHHHHHHHHHhhh-----
Q 012151 143 KLPTIVLQTCGVSGFLAFTAYPILRERAYLPVQDHQSLETPVTEFPPLRVKDIQVLETMDQENVYRFVSAIDTQI----- 217 (470)
Q Consensus 143 giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 217 (470)
|||+|.+...+........ +......+.+... . .+.+.+.+....+..
T Consensus 165 giP~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~----------~---------------~~~~~~~l~~~~~~~g~~~~ 217 (441)
T 2yjn_A 165 GTPHARLLWGPDITTRARQ--NFLGLLPDQPEEH----------R---------------EDPLAEWLTWTLEKYGGPAF 217 (441)
T ss_dssp TCCEEEECSSCCHHHHHHH--HHHHHGGGSCTTT----------C---------------CCHHHHHHHHHHHHTTCCCC
T ss_pred CCCEEEEecCCCcchhhhh--hhhhhcccccccc----------c---------------cchHHHHHHHHHHHcCCCCC
Confidence 9999998654432111110 0010111111100 0 000111111111111
Q ss_pred ----ccccEEEEcChHHhhHHHHHHHhhccCC-CCeeeeccCCCCCCCCCCCCCccchhhhhhhcCCCCCCeEEEEEcCc
Q 012151 218 ----MASSGVIWNSYRDLEQAGLGLAHQKYLS-IPIFPIGPLHKCSPASSGSLSSQDYQRSISWLDKQTPKSVVYISFGS 292 (470)
Q Consensus 218 ----~~~~~~l~~s~~~le~p~~~~~~~~~~~-~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs 292 (470)
...+.++.++.+.++++ . .++ .++.+++ .. .+.+ +.+|++..+++++||+++||
T Consensus 218 ~~~~~~~~~~l~~~~~~~~~~------~-~~~~~~~~~~~---~~--------~~~~---~~~~l~~~~~~~~v~v~~Gs 276 (441)
T 2yjn_A 218 DEEVVVGQWTIDPAPAAIRLD------T-GLKTVGMRYVD---YN--------GPSV---VPEWLHDEPERRRVCLTLGI 276 (441)
T ss_dssp CGGGTSCSSEEECSCGGGSCC------C-CCCEEECCCCC---CC--------SSCC---CCGGGSSCCSSCEEEEEC--
T ss_pred CccccCCCeEEEecCccccCC------C-CCCCCceeeeC---CC--------CCcc---cchHhhcCCCCCEEEEECCC
Confidence 11344566665655532 1 121 1122221 11 1122 56788766677899999999
Q ss_pred cccc---CHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeeccc
Q 012151 293 VIAI---NKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHS 369 (470)
Q Consensus 293 ~~~~---~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HG 369 (470)
+... ..+.+..++++++..+.+++|++++.... .+. ..++|+++.+|+||.++|+.+++ |||||
T Consensus 277 ~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~------~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~V~~~ 343 (441)
T 2yjn_A 277 SSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLE------GVA-----NIPDNVRTVGFVPMHALLPTCAA--TVHHG 343 (441)
T ss_dssp --------CCSTTTTHHHHHTSSSEEEECCCTTTTS------SCS-----SCCSSEEECCSCCHHHHGGGCSE--EEECC
T ss_pred CcccccChHHHHHHHHHHHHcCCCEEEEEECCcchh------hhc-----cCCCCEEEecCCCHHHHHhhCCE--EEECC
Confidence 9753 34667788999999999999988654211 111 12456699999999999977777 99999
Q ss_pred CchhhHHhhhcCCceecCCCccchhhhHHHHHhhhheeEEcCC-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Q 012151 370 GWNSTLESMCEGVPMICQPYLPDQMVNARYVSHFWRVGLHSEW-KLERMEIERAIRRVMVEAEGQEMRARIMHLKEKVDF 448 (470)
Q Consensus 370 G~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~ 448 (470)
|+||++||+++|||+|++|...||+.||+++++ .|+|+.++. ++++++|.++|+++++| ++++++++++++++.+
T Consensus 344 G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~ 419 (441)
T 2yjn_A 344 GPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQE-FGAGIALPVPELTPDQLRESVKRVLDD---PAHRAGAARMRDDMLA 419 (441)
T ss_dssp CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCTTTCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHH-cCCEEEcccccCCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999 599999987 78999999999999999 9999999999999987
Q ss_pred HHhcCCChHHHHHHHHHHHH
Q 012151 449 CLRKGGSSHQSLERLIDHIL 468 (470)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~l~ 468 (470)
. .+..++++.|.+.+.
T Consensus 420 ~----~~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 420 E----PSPAEVVGICEELAA 435 (441)
T ss_dssp S----CCHHHHHHHHHHHHH
T ss_pred C----CCHHHHHHHHHHHHH
Confidence 6 778888877776654
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=8.6e-39 Score=321.82 Aligned_cols=378 Identities=14% Similarity=0.167 Sum_probs=257.6
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccCCCCCeeEEecCCCCCCCccc----ccCHHHHH
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTNYFSCNYPHFDFHSFPDGFSETEAS----VEDVAVFF 91 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~----~~~~~~~~ 91 (470)
+||++++.++.||++|++.||++|+++||+|++++++...+.+.. .|+.++.++...+..... ..+....+
T Consensus 8 ~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (430)
T 2iyf_A 8 AHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA-----TGPRPVLYHSTLPGPDADPEAWGSTLLDNV 82 (430)
T ss_dssp CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT-----TSCEEEECCCCSCCTTSCGGGGCSSHHHHH
T ss_pred ceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh-----CCCEEEEcCCcCccccccccccchhhHHHH
Confidence 589999999999999999999999999999999999776555554 789999998654432211 12333333
Q ss_pred HHHHhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCccchHHHHhhcCCCeEEEecccHHHHHHHHhchhhhhccC
Q 012151 92 TAINGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFWFFTHTVAADFKLPTIVLQTCGVSGFLAFTAYPILRERAY 171 (470)
Q Consensus 92 ~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~~~~~~vA~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~ 171 (470)
..+...+...+..+.+.+ +. .+||+||+|...+++..+|+.+|||+|.+++.+.... .+...+. .+.+
T Consensus 83 ~~~~~~~~~~~~~l~~~l-~~--------~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~-~~~~~~~--~~~~ 150 (430)
T 2iyf_A 83 EPFLNDAIQALPQLADAY-AD--------DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWK-GYEEEVA--EPMW 150 (430)
T ss_dssp HHHHHHHHHHHHHHHHHH-TT--------SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCT-THHHHTH--HHHH
T ss_pred HHHHHHHHHHHHHHHHHh-hc--------cCCCEEEECCccHHHHHHHHHcCCCEEEEeccccccc-ccccccc--cchh
Confidence 333322323333333333 22 5899999998777889999999999999886542100 0000000 0000
Q ss_pred CCCCCCCCCcccCCCCCCCCccccCcccccCchhHHHHHHH------HHhhhccccEEEEcChHHhhHHHHHHHhhccCC
Q 012151 172 LPVQDHQSLETPVTEFPPLRVKDIQVLETMDQENVYRFVSA------IDTQIMASSGVIWNSYRDLEQAGLGLAHQKYLS 245 (470)
Q Consensus 172 ~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~s~~~le~p~~~~~~~~~~~ 245 (470)
..+... +... .......+.... ..+.....+.++.++.+.++++ ...++
T Consensus 151 ----------~~~~~~--------~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~------~~~~~ 205 (430)
T 2iyf_A 151 ----------REPRQT--------ERGR-AYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPH------ADRVD 205 (430)
T ss_dssp ----------HHHHHS--------HHHH-HHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTT------GGGSC
T ss_pred ----------hhhccc--------hHHH-HHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCC------cccCC
Confidence 000000 0000 000000000000 0011124677899999988865 44566
Q ss_pred CC-eeeeccCCCCCCCCCCCCCccchhhhhhhcCCCCCCeEEEEEcCcccccCHHHHHHHHHHHHhC-CCCEEEEEcCCC
Q 012151 246 IP-IFPIGPLHKCSPASSGSLSSQDYQRSISWLDKQTPKSVVYISFGSVIAINKDGFLEIAWGVANS-RMPFLWVVRPGL 323 (470)
Q Consensus 246 ~~-v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~i~~al~~~-~~~~i~~~~~~~ 323 (470)
++ ++++||...... + ..+|....+++++||+++||......+.+..++++++.. +.+++|.++.+.
T Consensus 206 ~~~v~~vG~~~~~~~---------~---~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~ 273 (430)
T 2iyf_A 206 EDVYTFVGACQGDRA---------E---EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKV 273 (430)
T ss_dssp TTTEEECCCCC-----------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---
T ss_pred CccEEEeCCcCCCCC---------C---CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCC
Confidence 67 999998653211 1 123554445678999999999855677888899999886 778888876532
Q ss_pred CCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHhhhcCCceecCCCccchhhhHHHHHhh
Q 012151 324 VSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMCEGVPMICQPYLPDQMVNARYVSHF 403 (470)
Q Consensus 324 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~ 403 (470)
.. +.+ +..++|+.+.+|+|+.++|+++++ ||||||+||++||+++|+|+|++|...||..||.++++
T Consensus 274 ~~---------~~l-~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~- 340 (430)
T 2iyf_A 274 TP---------AEL-GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQG- 340 (430)
T ss_dssp CG---------GGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-
T ss_pred Ch---------HHh-ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHH-
Confidence 11 111 123466799999999999999988 99999999999999999999999999999999999999
Q ss_pred hheeEEcCC-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 012151 404 WRVGLHSEW-KLERMEIERAIRRVMVEAEGQEMRARIMHLKEKVDFCLRKGGSSHQSLERLIDHI 467 (470)
Q Consensus 404 ~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~l 467 (470)
.|+|+.++. ++++++|+++|+++++| +++++++.++++++.+. ++..++++.+++.+
T Consensus 341 ~g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~~~ 398 (430)
T 2iyf_A 341 LGVARKLATEEATADLLRETALALVDD---PEVARRLRRIQAEMAQE----GGTRRAADLIEAEL 398 (430)
T ss_dssp TTSEEECCCC-CCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHH----CHHHHHHHHHHTTS
T ss_pred cCCEEEcCCCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHhc----CcHHHHHHHHHHHh
Confidence 599999987 78999999999999999 89999999999998876 77777777776544
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=1e-38 Score=316.48 Aligned_cols=356 Identities=13% Similarity=0.069 Sum_probs=251.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccCCCCCeeEEecCCCCCCCc-------c--cc-c
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTNYFSCNYPHFDFHSFPDGFSETE-------A--SV-E 85 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~-------~--~~-~ 85 (470)
|||++++.++.||++|+++||++|+++||+|++++++...+.+.. .|+.++.++.....+. . .. .
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTG-----VGLPAVATTDLPIRHFITTDREGRPEAIPS 75 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-----TTCCEEESCSSCHHHHHHBCTTSCBCCCCC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHh-----CCCEEEEeCCcchHHHHhhhcccCccccCc
Confidence 589999999999999999999999999999999998765555554 6889998875320000 0 00 1
Q ss_pred --CHHHHH-HH-HHhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCccchHHHHhhcCCCeEEEecccHHHHHHHH
Q 012151 86 --DVAVFF-TA-INGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFWFFTHTVAADFKLPTIVLQTCGVSGFLAFT 161 (470)
Q Consensus 86 --~~~~~~-~~-~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~~~~~~vA~~~giP~v~~~~~~~~~~~~~~ 161 (470)
+....+ .. +...+...+.++.+.+.+ .+||+||+|.+..++..+|+.+|||+|.+...+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~------ 140 (384)
T 2p6p_A 76 DPVAQARFTGRWFARMAASSLPRMLDFSRA---------WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD------ 140 (384)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC------
T ss_pred chHHHHHHHHHHHHhhHHHHHHHHHHHHhc---------cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc------
Confidence 111111 11 111222223333333322 38999999987788889999999999987532110
Q ss_pred hchhhhhccCCCCCCCCCCcccCCCCCCCCccccCcccccCchhHHHHHHHHHhh--hccccEEEEcChHHhhHHHHHHH
Q 012151 162 AYPILRERAYLPVQDHQSLETPVTEFPPLRVKDIQVLETMDQENVYRFVSAIDTQ--IMASSGVIWNSYRDLEQAGLGLA 239 (470)
Q Consensus 162 ~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~s~~~le~p~~~~~ 239 (470)
+ . . + .. ......+.+...... ....+.++.++.+.++++
T Consensus 141 -----------~--~---------~---~--~~-------~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~----- 181 (384)
T 2p6p_A 141 -----------A--D---------G---I--HP-------GADAELRPELSELGLERLPAPDLFIDICPPSLRPA----- 181 (384)
T ss_dssp -----------C--T---------T---T--HH-------HHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT-----
T ss_pred -----------c--c---------h---h--hH-------HHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC-----
Confidence 0 0 0 0 00 000000000000000 011567899999888864
Q ss_pred hhccCC-CCeeeeccCCCCCCCCCCCCCccchhhhhhhcCCCCCCeEEEEEcCccccc-----CHHHHHHHHHHHHhCCC
Q 012151 240 HQKYLS-IPIFPIGPLHKCSPASSGSLSSQDYQRSISWLDKQTPKSVVYISFGSVIAI-----NKDGFLEIAWGVANSRM 313 (470)
Q Consensus 240 ~~~~~~-~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~-----~~~~~~~i~~al~~~~~ 313 (470)
.+ ++ .++.+++. . . +.+ +.+|++..+++++||+++||.... +.+.+..++++++..+.
T Consensus 182 -~~-~~~~~~~~~~~-~-~---------~~~---~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~ 245 (384)
T 2p6p_A 182 -NA-APARMMRHVAT-S-R---------QCP---LEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDV 245 (384)
T ss_dssp -TS-CCCEECCCCCC-C-C---------CCB---CCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTC
T ss_pred -CC-CCCCceEecCC-C-C---------CCC---CCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCc
Confidence 32 22 23444421 1 0 122 567887555678999999999864 45788899999999999
Q ss_pred CEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHhhhcCCceecCCCccch
Q 012151 314 PFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMCEGVPMICQPYLPDQ 393 (470)
Q Consensus 314 ~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ 393 (470)
+++|++++. ..+.+ +..++|+.+ +|+||.++|+++++ ||||||+||++||+++|+|+|++|...||
T Consensus 246 ~~~~~~g~~----------~~~~l-~~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq 311 (384)
T 2p6p_A 246 ELIVAAPDT----------VAEAL-RAEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVL 311 (384)
T ss_dssp EEEEECCHH----------HHHHH-HHHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHH
T ss_pred EEEEEeCCC----------CHHhh-CCCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccc
Confidence 999987431 11222 235788999 99999999988777 99999999999999999999999999999
Q ss_pred hhhHHHHHhhhheeEEcCC-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 012151 394 MVNARYVSHFWRVGLHSEW-KLERMEIERAIRRVMVEAEGQEMRARIMHLKEKVDFCLRKGGSSHQSLERLIDHIL 468 (470)
Q Consensus 394 ~~na~rv~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 468 (470)
+.||.++++ .|+|+.++. .+++++|.++|+++++| ++++++++++++++++. .+..++++.|.+.+-
T Consensus 312 ~~~a~~~~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~~~~ 379 (384)
T 2p6p_A 312 EAPARRVAD-YGAAIALLPGEDSTEAIADSCQELQAK---DTYARRAQDLSREISGM----PLPATVVTALEQLAH 379 (384)
T ss_dssp HHHHHHHHH-HTSEEECCTTCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHTS----CCHHHHHHHHHHHHH
T ss_pred hHHHHHHHH-CCCeEecCcCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHhC----CCHHHHHHHHHHHhh
Confidence 999999999 599999987 78999999999999999 99999999999999987 788888887776653
No 16
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=3.7e-36 Score=299.51 Aligned_cols=352 Identities=14% Similarity=0.147 Sum_probs=240.0
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccCCCCCeeEEecCCCCCCC-------------
Q 012151 14 NGRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTNYFSCNYPHFDFHSFPDGFSET------------- 80 (470)
Q Consensus 14 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~------------- 80 (470)
+.|||+|++.++.||++|++.||++|.++||+|+++++ ...+.+.. .|+.+..++......
T Consensus 19 ~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~-----~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (398)
T 3oti_A 19 RHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAA-----AGLEVVDVAPDYSAVKVFEQVAKDNPRF 92 (398)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHT-----TTCEEEESSTTCCHHHHHHHHHHHCHHH
T ss_pred hcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHh-----CCCeeEecCCccCHHHHhhhcccCCccc
Confidence 35799999999999999999999999999999999999 66666655 899999998432100
Q ss_pred --------cccccCHHHHHHHHHhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCccchHHHHhhcCCCeEEEecc
Q 012151 81 --------EASVEDVAVFFTAINGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFWFFTHTVAADFKLPTIVLQTC 152 (470)
Q Consensus 81 --------~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~~~~~~vA~~~giP~v~~~~~ 152 (470)
..........+..........+.+.+++ ++||+||+|...+++..+|+.+|||+|.....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~ 160 (398)
T 3oti_A 93 AETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDD------------YRPDLVVYEQGATVGLLAADRAGVPAVQRNQS 160 (398)
T ss_dssp HHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHH------------HCCSEEEEETTCHHHHHHHHHHTCCEEEECCT
T ss_pred cccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH------------cCCCEEEECchhhHHHHHHHHcCCCEEEEecc
Confidence 0011112222222222223333334444 38999999988888999999999999986533
Q ss_pred cHHHHHHHHhchhhhhccCCCCCCCCCCcccCCCCCCCCccccCcccccCchhHHHHHHHHHhhhccccEEEEcChHHhh
Q 012151 153 GVSGFLAFTAYPILRERAYLPVQDHQSLETPVTEFPPLRVKDIQVLETMDQENVYRFVSAIDTQIMASSGVIWNSYRDLE 232 (470)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le 232 (470)
..... ..... .... +........-........+....+.+.
T Consensus 161 ~~~~~-------~~~~~-----------------------------~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (398)
T 3oti_A 161 AWRTR-------GMHRS-----------------------------IASF---LTDLMDKHQVSLPEPVATIESFPPSLL 201 (398)
T ss_dssp TCCCT-------THHHH-----------------------------HHTT---CHHHHHHTTCCCCCCSEEECSSCGGGG
T ss_pred CCCcc-------chhhH-----------------------------HHHH---HHHHHHHcCCCCCCCCeEEEeCCHHHC
Confidence 11000 00000 0000 000000000001223445555555555
Q ss_pred HHHHHHHhhccCCCCeeeeccCCCCCCCCCCCCCccchhhhhhhcCCCCCCeEEEEEcCccccc--CHHHHHHHHHHHHh
Q 012151 233 QAGLGLAHQKYLSIPIFPIGPLHKCSPASSGSLSSQDYQRSISWLDKQTPKSVVYISFGSVIAI--NKDGFLEIAWGVAN 310 (470)
Q Consensus 233 ~p~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~--~~~~~~~i~~al~~ 310 (470)
.+ ......++.++. . . .+.. +.+|+...+++++||+++||.... ..+.+..+++++++
T Consensus 202 ~~------~~~~~~~~~~~~-~--~--------~~~~---~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~ 261 (398)
T 3oti_A 202 LE------AEPEGWFMRWVP-Y--G--------GGAV---LGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGE 261 (398)
T ss_dssp TT------SCCCSBCCCCCC-C--C--------CCEE---CCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHT
T ss_pred CC------CCCCCCCccccC-C--C--------CCcC---CchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHc
Confidence 33 111111222221 1 1 0112 455776556788999999999653 66788899999999
Q ss_pred CCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHhhhcCCceecCCCc
Q 012151 311 SRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMCEGVPMICQPYL 390 (470)
Q Consensus 311 ~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~ 390 (470)
.+.+++|+.++..... .+.+ ++|+++.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|..
T Consensus 262 ~~~~~v~~~g~~~~~~---l~~~--------~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~ 328 (398)
T 3oti_A 262 VDADFVLALGDLDISP---LGTL--------PRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDP 328 (398)
T ss_dssp SSSEEEEECTTSCCGG---GCSC--------CTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCT
T ss_pred CCCEEEEEECCcChhh---hccC--------CCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCC
Confidence 9999999886642110 1122 456699999999999999887 99999999999999999999999999
Q ss_pred cchhhhH--HHHHhhhheeEEcCC-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 012151 391 PDQMVNA--RYVSHFWRVGLHSEW-KLERMEIERAIRRVMVEAEGQEMRARIMHLKEKVDFCLRKGGSSHQSLERLIDHI 467 (470)
Q Consensus 391 ~DQ~~na--~rv~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~l 467 (470)
.||..|| .++++ .|+|+.++. +.+++.|. ++++| ++++++++++++++.+. .+..+.++.|.+.+
T Consensus 329 ~dq~~~a~~~~~~~-~g~g~~~~~~~~~~~~l~----~ll~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 329 RDQFQHTAREAVSR-RGIGLVSTSDKVDADLLR----RLIGD---ESLRTAAREVREEMVAL----PTPAETVRRIVERI 396 (398)
T ss_dssp TCCSSCTTHHHHHH-HTSEEECCGGGCCHHHHH----HHHHC---HHHHHHHHHHHHHHHTS----CCHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHH-CCCEEeeCCCCCCHHHHH----HHHcC---HHHHHHHHHHHHHHHhC----CCHHHHHHHHHHHh
Confidence 9999999 99999 599999988 77888776 88899 99999999999999876 77777777666543
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=3.8e-37 Score=306.63 Aligned_cols=358 Identities=14% Similarity=0.128 Sum_probs=226.3
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccCCCCCeeEEecCCCCCCC---------c--c
Q 012151 14 NGRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTNYFSCNYPHFDFHSFPDGFSET---------E--A 82 (470)
Q Consensus 14 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~---------~--~ 82 (470)
.+|||+|++.++.||++|++.||++|+++||+|++++++...+.+.. .|+.+..++...... . .
T Consensus 14 ~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~-----~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (398)
T 4fzr_A 14 SHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTG-----AGLPFAPTCPSLDMPEVLSWDREGNRTT 88 (398)
T ss_dssp -CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHH-----TTCCEEEEESSCCHHHHHSBCTTSCBCC
T ss_pred CceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHh-----CCCeeEecCCccchHhhhhhhccCcccc
Confidence 46899999999999999999999999999999999998776666665 788888886321100 0 0
Q ss_pred cccCHHHHH----HHHHhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCccchHHHHhhcCCCeEEEecccHHHHH
Q 012151 83 SVEDVAVFF----TAINGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFWFFTHTVAADFKLPTIVLQTCGVSGFL 158 (470)
Q Consensus 83 ~~~~~~~~~----~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~~~~~~vA~~~giP~v~~~~~~~~~~~ 158 (470)
...+....+ ..+.......+.++.+.+.+ ++||+|++|...+++..+|+.+|||+|.+.........
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~ 159 (398)
T 4fzr_A 89 MPREEKPLLEHIGRGYGRLVLRMRDEALALAER---------WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPEL 159 (398)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHH
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh---------CCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchh
Confidence 000111111 11111122222222222222 48999999987788999999999999987654211100
Q ss_pred HHHhchhhhhccCCCCCCCCCCcccCCCCCCCCccccCcccccCchhHHHHHHHHHhhhccccEEEEcChHHhhHHHHHH
Q 012151 159 AFTAYPILRERAYLPVQDHQSLETPVTEFPPLRVKDIQVLETMDQENVYRFVSAIDTQIMASSGVIWNSYRDLEQAGLGL 238 (470)
Q Consensus 159 ~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~p~~~~ 238 (470)
............ +. .+.. ......+..+....+.++.+
T Consensus 160 ~~~~~~~~l~~~-------------~~---~~~~----------------------~~~~~~~~~~~~~~~~~~~~---- 197 (398)
T 4fzr_A 160 IKSAGVGELAPE-------------LA---ELGL----------------------TDFPDPLLSIDVCPPSMEAQ---- 197 (398)
T ss_dssp HHHHHHHHTHHH-------------HH---TTTC----------------------SSCCCCSEEEECSCGGGC------
T ss_pred hhHHHHHHHHHH-------------HH---HcCC----------------------CCCCCCCeEEEeCChhhCCC----
Confidence 000000000000 00 0000 00012244555566666543
Q ss_pred HhhccCCCCeeeeccCCCCCCCCCCCCCccchhhhhhhcCCCCCCeEEEEEcCccccc--------CHHHHHHHHHHHHh
Q 012151 239 AHQKYLSIPIFPIGPLHKCSPASSGSLSSQDYQRSISWLDKQTPKSVVYISFGSVIAI--------NKDGFLEIAWGVAN 310 (470)
Q Consensus 239 ~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~--------~~~~~~~i~~al~~ 310 (470)
......++.++++.. ...+ +.+|+...+++++||+++||.... ..+.+..+++++++
T Consensus 198 --~~~~~~~~~~~~~~~----------~~~~---~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~ 262 (398)
T 4fzr_A 198 --PKPGTTKMRYVPYNG----------RNDQ---VPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPK 262 (398)
T ss_dssp ----CCCEECCCCCCCC----------SSCC---CCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGG
T ss_pred --CCCCCCCeeeeCCCC----------CCCC---CchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHh
Confidence 211111233332210 1122 556766556778999999999752 45678889999999
Q ss_pred CCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHhhhcCCceecCCCc
Q 012151 311 SRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMCEGVPMICQPYL 390 (470)
Q Consensus 311 ~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~ 390 (470)
.+.+++|+.++... +.+ +..++|+++.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|..
T Consensus 263 ~~~~~v~~~~~~~~----------~~l-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~ 329 (398)
T 4fzr_A 263 LGFEVVVAVSDKLA----------QTL-QPLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVI 329 (398)
T ss_dssp GTCEEEECCCC-------------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCS
T ss_pred CCCEEEEEeCCcch----------hhh-ccCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCc
Confidence 99999888755421 111 133567799999999999999888 99999999999999999999999999
Q ss_pred cchhhhHHHHHhhhheeEEcCC-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 012151 391 PDQMVNARYVSHFWRVGLHSEW-KLERMEIERAIRRVMVEAEGQEMRARIMHLKEKVDFCLRKGGSSHQSLERL 463 (470)
Q Consensus 391 ~DQ~~na~rv~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~ 463 (470)
.||+.||.++++ .|+|+.++. +++++.|.++|+++++| ++++++++++++++.+. .+..+.++.+
T Consensus 330 ~~q~~~a~~~~~-~g~g~~~~~~~~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~l 395 (398)
T 4fzr_A 330 AEVWDSARLLHA-AGAGVEVPWEQAGVESVLAACARIRDD---SSYVGNARRLAAEMATL----PTPADIVRLI 395 (398)
T ss_dssp GGGHHHHHHHHH-TTSEEECC-------CHHHHHHHHHHC---THHHHHHHHHHHHHTTS----CCHHHHHHHH
T ss_pred hhHHHHHHHHHH-cCCEEecCcccCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHcC----CCHHHHHHHH
Confidence 999999999999 599999987 78999999999999999 89999999999998875 5555555443
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=6.4e-35 Score=289.79 Aligned_cols=355 Identities=14% Similarity=0.150 Sum_probs=237.1
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccCCCCCeeEEec-CCCCCCC----------cc-
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTNYFSCNYPHFDFHSF-PDGFSET----------EA- 82 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~gi~~~~~-~~~~~~~----------~~- 82 (470)
+|||+|++.++.||++|++.|+++|+++||+|++++++...+.+.. .|+.+..+ +...... ..
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHG-----AGLTTAGIRGNDRTGDTGGTTQLRFPNPA 75 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHH-----BTCEEEEC--------------CCSCCGG
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHh-----CCCceeeecCCccchhhhhhhcccccccc
Confidence 4799999999999999999999999999999999998765555555 78888888 4211100 00
Q ss_pred ----cccCHHHHHHHHHhhc----chHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCccchHHHHhhcCCCeEEEecccH
Q 012151 83 ----SVEDVAVFFTAINGKC----IMPFRDCLAEILMKSKADQNKDSSPCCLITDAFWFFTHTVAADFKLPTIVLQTCGV 154 (470)
Q Consensus 83 ----~~~~~~~~~~~~~~~~----~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~~~~~~vA~~~giP~v~~~~~~~ 154 (470)
........+....... ...+.++.+.+.+ ++||+|++|...+.+..+|+.+|||++.+.....
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~ 146 (391)
T 3tsa_A 76 FGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA---------WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVD 146 (391)
T ss_dssp GGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCC
T ss_pred cccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh---------cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCc
Confidence 0011111121111111 0002222222222 4899999998778888999999999998754321
Q ss_pred HHHHHHHhchhhhhccCCCCCCCCCCcccCCCCCCCCccccCcccccCchhHHHHHHHHHhhh-----ccccEEEEcChH
Q 012151 155 SGFLAFTAYPILRERAYLPVQDHQSLETPVTEFPPLRVKDIQVLETMDQENVYRFVSAIDTQI-----MASSGVIWNSYR 229 (470)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~s~~ 229 (470)
..... ......+.+....... ...+..+....+
T Consensus 147 ~~~~~------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (391)
T 3tsa_A 147 PTAGP------------------------------------------FSDRAHELLDPVCRHHGLTGLPTPELILDPCPP 184 (391)
T ss_dssp CTTTH------------------------------------------HHHHHHHHHHHHHHHTTSSSSCCCSEEEECSCG
T ss_pred ccccc------------------------------------------ccchHHHHHHHHHHHcCCCCCCCCceEEEecCh
Confidence 00000 0000000000000100 112455666666
Q ss_pred HhhHHHHHHHhhccCCCCeeeeccCCCCCCCCCCCCCccchhhhhhhcCCCCCCeEEEEEcCcccc--cC-HHHHHHHHH
Q 012151 230 DLEQAGLGLAHQKYLSIPIFPIGPLHKCSPASSGSLSSQDYQRSISWLDKQTPKSVVYISFGSVIA--IN-KDGFLEIAW 306 (470)
Q Consensus 230 ~le~p~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~--~~-~~~~~~i~~ 306 (470)
+++.+ ......++.++ |+.. +.. +.+|+...+++++||+++||... .. .+.+..+++
T Consensus 185 ~~~~~------~~~~~~~~~~~-p~~~----------~~~---~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~ 244 (391)
T 3tsa_A 185 SLQAS------DAPQGAPVQYV-PYNG----------SGA---FPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAA 244 (391)
T ss_dssp GGSCT------TSCCCEECCCC-CCCC----------CEE---CCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHH
T ss_pred hhcCC------CCCccCCeeee-cCCC----------CcC---CCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHH
Confidence 65543 22111223333 1110 112 45677655678899999999954 33 677888888
Q ss_pred HHHhC-CCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHhhhcCCcee
Q 012151 307 GVANS-RMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMCEGVPMI 385 (470)
Q Consensus 307 al~~~-~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v 385 (470)
+ ++. +.+++|+.++..... .+ ..++|+++.+|+|+.++|+++++ ||||||.||++||+++|+|+|
T Consensus 245 ~-~~~p~~~~v~~~~~~~~~~---l~--------~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v 310 (391)
T 3tsa_A 245 A-TELPGVEAVIAVPPEHRAL---LT--------DLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQL 310 (391)
T ss_dssp H-HTSTTEEEEEECCGGGGGG---CT--------TCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEE
T ss_pred h-ccCCCeEEEEEECCcchhh---cc--------cCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEE
Confidence 8 887 778888775532110 11 22456699999999999977777 999999999999999999999
Q ss_pred cCCCccchhhhHHHHHhhhheeEEcCC---cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHH
Q 012151 386 CQPYLPDQMVNARYVSHFWRVGLHSEW---KLERMEIERAIRRVMVEAEGQEMRARIMHLKEKVDFCLRKGGSSHQSLER 462 (470)
Q Consensus 386 ~~P~~~DQ~~na~rv~~~~G~G~~l~~---~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~ 462 (470)
++|...||+.|+.++++ .|+|..+.. +.+++.|.++|+++++| ++++++++++++.+.+. .+..++++.
T Consensus 311 ~~p~~~~q~~~a~~~~~-~g~g~~~~~~~~~~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~ 382 (391)
T 3tsa_A 311 VLPQYFDQFDYARNLAA-AGAGICLPDEQAQSDHEQFTDSIATVLGD---TGFAAAAIKLSDEITAM----PHPAALVRT 382 (391)
T ss_dssp ECCCSTTHHHHHHHHHH-TTSEEECCSHHHHTCHHHHHHHHHHHHTC---THHHHHHHHHHHHHHTS----CCHHHHHHH
T ss_pred ecCCcccHHHHHHHHHH-cCCEEecCcccccCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHcC----CCHHHHHHH
Confidence 99999999999999999 599999975 47899999999999999 89999999999998875 777777777
Q ss_pred HHHHH
Q 012151 463 LIDHI 467 (470)
Q Consensus 463 ~~~~l 467 (470)
+.+.+
T Consensus 383 i~~~~ 387 (391)
T 3tsa_A 383 LENTA 387 (391)
T ss_dssp HHHC-
T ss_pred HHHHH
Confidence 66544
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=4.1e-32 Score=271.38 Aligned_cols=361 Identities=17% Similarity=0.168 Sum_probs=244.5
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccCCCCCeeEEecCCCCCCC-------------
Q 012151 14 NGRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTNYFSCNYPHFDFHSFPDGFSET------------- 80 (470)
Q Consensus 14 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~------------- 80 (470)
++|||++++.++.||++|++.||++|+++||+|++++++...+.... .|+.+..++..+..+
T Consensus 19 ~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (412)
T 3otg_A 19 RHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRK-----LGFEPVATGMPVFDGFLAALRIRFDTDS 93 (412)
T ss_dssp CSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH-----TTCEEEECCCCHHHHHHHHHHHHHSCSC
T ss_pred ceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHh-----cCCceeecCcccccchhhhhhhhhcccC
Confidence 57899999999999999999999999999999999999765445554 789999987410000
Q ss_pred ------cccccCHHHHHHHH-HhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCccchHHHHhhcCCCeEEEeccc
Q 012151 81 ------EASVEDVAVFFTAI-NGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFWFFTHTVAADFKLPTIVLQTCG 153 (470)
Q Consensus 81 ------~~~~~~~~~~~~~~-~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~~~~~~vA~~~giP~v~~~~~~ 153 (470)
..........+... .......+...+++ ++||+|++|...+++..+|+.+|||+|......
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~ 161 (412)
T 3otg_A 94 PEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIER------------LRPDLVVQEISNYGAGLAALKAGIPTICHGVGR 161 (412)
T ss_dssp CTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHH------------HCCSEEEEETTCHHHHHHHHHHTCCEEEECCSC
T ss_pred CccCChhHhhHHHHHHHhccchHHHHHHHHHHHHh------------cCCCEEEECchhhHHHHHHHHcCCCEEEecccc
Confidence 00001111111111 11111223333333 389999999777778899999999999865432
Q ss_pred HHH----HHHHHhchhhhhccCCCCCCCCCCcccCCCCCCCCccccCcccccCchhHHHHHHHHHhhhccccEEEEcChH
Q 012151 154 VSG----FLAFTAYPILRERAYLPVQDHQSLETPVTEFPPLRVKDIQVLETMDQENVYRFVSAIDTQIMASSGVIWNSYR 229 (470)
Q Consensus 154 ~~~----~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~ 229 (470)
... ................+. ... ......+.++..+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~g~~~---------------~~~----------------------~~~~~~d~~i~~~~~ 204 (412)
T 3otg_A 162 DTPDDLTRSIEEEVRGLAQRLGLDL---------------PPG----------------------RIDGFGNPFIDIFPP 204 (412)
T ss_dssp CCCSHHHHHHHHHHHHHHHHTTCCC---------------CSS----------------------CCGGGGCCEEECSCG
T ss_pred cCchhhhHHHHHHHHHHHHHcCCCC---------------Ccc----------------------cccCCCCeEEeeCCH
Confidence 100 000000000000000000 000 001234556666666
Q ss_pred HhhHHHHHHHhhccCCCC---eeeeccCCCCCCCCCCCCCccchhhhhhh-cCCCCCCeEEEEEcCcccccCHHHHHHHH
Q 012151 230 DLEQAGLGLAHQKYLSIP---IFPIGPLHKCSPASSGSLSSQDYQRSISW-LDKQTPKSVVYISFGSVIAINKDGFLEIA 305 (470)
Q Consensus 230 ~le~p~~~~~~~~~~~~~---v~~vGpl~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~I~vs~Gs~~~~~~~~~~~i~ 305 (470)
.++.+ ...+... +.++++- ...+ ..+| ....+++++|++++||......+.+..++
T Consensus 205 ~~~~~------~~~~~~~~~~~~~~~~~-----------~~~~---~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~ 264 (412)
T 3otg_A 205 SLQEP------EFRARPRRHELRPVPFA-----------EQGD---LPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAI 264 (412)
T ss_dssp GGSCH------HHHTCTTEEECCCCCCC-----------CCCC---CCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHH
T ss_pred HhcCC------cccCCCCcceeeccCCC-----------CCCC---CCCccccccCCCCEEEEEcCCCCcCcHHHHHHHH
Confidence 66644 2211111 2222211 0112 3455 23245678999999999766778888999
Q ss_pred HHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHhhhcCCcee
Q 012151 306 WGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMCEGVPMI 385 (470)
Q Consensus 306 ~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v 385 (470)
+++++.+.+++|+++.+.... ..+.+ ++|+.+.+|+|+.++|+++++ ||+|||.||++||+++|+|+|
T Consensus 265 ~~l~~~~~~~~~~~g~~~~~~--~l~~~--------~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v 332 (412)
T 3otg_A 265 DGLAGLDADVLVASGPSLDVS--GLGEV--------PANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQL 332 (412)
T ss_dssp HHHHTSSSEEEEECCSSCCCT--TCCCC--------CTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEE
T ss_pred HHHHcCCCEEEEEECCCCChh--hhccC--------CCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEE
Confidence 999998889988886653111 01122 356699999999999999888 999999999999999999999
Q ss_pred cCCCccchhhhHHHHHhhhheeEEcCC-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 012151 386 CQPYLPDQMVNARYVSHFWRVGLHSEW-KLERMEIERAIRRVMVEAEGQEMRARIMHLKEKVDFCLRKGGSSHQSLERLI 464 (470)
Q Consensus 386 ~~P~~~DQ~~na~rv~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~ 464 (470)
++|...||..|+.++++. |+|..+.. ++++++|+++|+++++| +++++++.+.++++.+. .+..+.++.+.
T Consensus 333 ~~p~~~~q~~~~~~v~~~-g~g~~~~~~~~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 404 (412)
T 3otg_A 333 SFPWAGDSFANAQAVAQA-GAGDHLLPDNISPDSVSGAAKRLLAE---ESYRAGARAVAAEIAAM----PGPDEVVRLLP 404 (412)
T ss_dssp ECCCSTTHHHHHHHHHHH-TSEEECCGGGCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHS----CCHHHHHTTHH
T ss_pred ecCCchhHHHHHHHHHHc-CCEEecCcccCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHhcC----CCHHHHHHHHH
Confidence 999999999999999995 99999988 78999999999999999 99999999999988875 77777777776
Q ss_pred HHHH
Q 012151 465 DHIL 468 (470)
Q Consensus 465 ~~l~ 468 (470)
+.+.
T Consensus 405 ~l~~ 408 (412)
T 3otg_A 405 GFAS 408 (412)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 6554
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.96 E-value=2.6e-28 Score=239.47 Aligned_cols=317 Identities=13% Similarity=0.094 Sum_probs=196.3
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCC--cccccccCCCCCeeEEecCC-CCCCCc--ccccCHHHHH
Q 012151 17 RVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNF--SSTNYFSCNYPHFDFHSFPD-GFSETE--ASVEDVAVFF 91 (470)
Q Consensus 17 ~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~--~~~~~~~~~~~gi~~~~~~~-~~~~~~--~~~~~~~~~~ 91 (470)
||+|...++.||++|.++||++|.++||+|+|+++.... ..+.+ .|+.++.++. +++... ........++
T Consensus 4 ~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~-----~g~~~~~i~~~~~~~~~~~~~~~~~~~~~ 78 (365)
T 3s2u_A 4 NVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPK-----AGLPLHLIQVSGLRGKGLKSLVKAPLELL 78 (365)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGG-----GTCCEEECC--------------CHHHHH
T ss_pred cEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhh-----cCCcEEEEECCCcCCCCHHHHHHHHHHHH
Confidence 899999888899999999999999999999999876432 33444 6888888862 222110 0011111111
Q ss_pred HHHHhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCc--cchHHHHhhcCCCeEEEecccHHHHHHHHhchhhhhc
Q 012151 92 TAINGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFW--FFTHTVAADFKLPTIVLQTCGVSGFLAFTAYPILRER 169 (470)
Q Consensus 92 ~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~--~~~~~vA~~~giP~v~~~~~~~~~~~~~~~~~~~~~~ 169 (470)
..+. ....+++++ +||+||++... ..+..+|+.++||+++...-
T Consensus 79 ~~~~-----~~~~~l~~~------------~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n----------------- 124 (365)
T 3s2u_A 79 KSLF-----QALRVIRQL------------RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQN----------------- 124 (365)
T ss_dssp HHHH-----HHHHHHHHH------------CCSEEEECSSSTHHHHHHHHHHTTCCEEEEECS-----------------
T ss_pred HHHH-----HHHHHHHhc------------CCCEEEEcCCcchHHHHHHHHHcCCCEEEEecc-----------------
Confidence 1111 122344443 99999999655 34567899999999973210
Q ss_pred cCCCCCCCCCCcccCCCCCCCCccccCcccccCchhHHHHHHHHHhhhccccEEEEcChHHhhHHHHHHHhhccCCCCee
Q 012151 170 AYLPVQDHQSLETPVTEFPPLRVKDIQVLETMDQENVYRFVSAIDTQIMASSGVIWNSYRDLEQAGLGLAHQKYLSIPIF 249 (470)
Q Consensus 170 ~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~p~~~~~~~~~~~~~v~ 249 (470)
.++++ .. + + ..+.++.++. ++++.. .. ..+..
T Consensus 125 -------------~~~G~---~n---------------r----~--l~~~a~~v~~-~~~~~~--------~~--~~k~~ 156 (365)
T 3s2u_A 125 -------------AVAGT---AN---------------R----S--LAPIARRVCE-AFPDTF--------PA--SDKRL 156 (365)
T ss_dssp -------------SSCCH---HH---------------H----H--HGGGCSEEEE-SSTTSS--------CC-----CE
T ss_pred -------------hhhhh---HH---------------H----h--hccccceeee-cccccc--------cC--cCcEE
Confidence 01110 00 0 0 0112233332 222111 10 13466
Q ss_pred eeccCCCCCCCCCCCCCccchhhhhhhcCCCCCCeEEEEEcCcccccCHHHHHHHHHHHHhCC----CCEEEEEcCCCCC
Q 012151 250 PIGPLHKCSPASSGSLSSQDYQRSISWLDKQTPKSVVYISFGSVIAINKDGFLEIAWGVANSR----MPFLWVVRPGLVS 325 (470)
Q Consensus 250 ~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~i~~al~~~~----~~~i~~~~~~~~~ 325 (470)
++|........ .+ -..+....+++++|++..||... ....+.+.++++.+. ..++++++...
T Consensus 157 ~~g~pvr~~~~-------~~---~~~~~~~~~~~~~ilv~gGs~g~--~~~~~~~~~al~~l~~~~~~~vi~~~G~~~-- 222 (365)
T 3s2u_A 157 TTGNPVRGELF-------LD---AHARAPLTGRRVNLLVLGGSLGA--EPLNKLLPEALAQVPLEIRPAIRHQAGRQH-- 222 (365)
T ss_dssp ECCCCCCGGGC-------CC---TTSSCCCTTSCCEEEECCTTTTC--SHHHHHHHHHHHTSCTTTCCEEEEECCTTT--
T ss_pred EECCCCchhhc-------cc---hhhhcccCCCCcEEEEECCcCCc--cccchhhHHHHHhcccccceEEEEecCccc--
Confidence 77765543111 01 01111223456789998898864 334455677777653 34566554321
Q ss_pred CCcccCCCchhHHHHhcCCceeeeccChH-hhhccCCcceeecccCchhhHHhhhcCCceecCCCc----cchhhhHHHH
Q 012151 326 GAEWVEPLPKGFLEMLDGRGCIVKWAPQQ-EVLAHPAVGGFWTHSGWNSTLESMCEGVPMICQPYL----PDQMVNARYV 400 (470)
Q Consensus 326 ~~~~~~~~p~~~~~~~~~~~~~~~~~p~~-~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~----~DQ~~na~rv 400 (470)
.+.+.+ .....+.++.+.+|+++. ++|+.+++ +|||+|.+|++|++++|+|+|.+|+. .+|..||+++
T Consensus 223 ----~~~~~~-~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l 295 (365)
T 3s2u_A 223 ----AEITAE-RYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFL 295 (365)
T ss_dssp ----HHHHHH-HHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHH
T ss_pred ----cccccc-eecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHH
Confidence 011111 223445678889999976 59999998 99999999999999999999999974 5899999999
Q ss_pred HhhhheeEEcCC-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Q 012151 401 SHFWRVGLHSEW-KLERMEIERAIRRVMVEAEGQEMRARIMHLKEKVDF 448 (470)
Q Consensus 401 ~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~ 448 (470)
++. |+|..++. +++++.|.++|.++++| ++. .++|++..++
T Consensus 296 ~~~-G~a~~l~~~~~~~~~L~~~i~~ll~d---~~~---~~~m~~~a~~ 337 (365)
T 3s2u_A 296 VRS-GAGRLLPQKSTGAAELAAQLSEVLMH---PET---LRSMADQARS 337 (365)
T ss_dssp HTT-TSEEECCTTTCCHHHHHHHHHHHHHC---THH---HHHHHHHHHH
T ss_pred HHC-CCEEEeecCCCCHHHHHHHHHHHHCC---HHH---HHHHHHHHHh
Confidence 995 99999987 89999999999999999 443 3445555544
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=3.3e-27 Score=206.05 Aligned_cols=163 Identities=22% Similarity=0.394 Sum_probs=137.3
Q ss_pred CCccchhhhhhhcCCCCCCeEEEEEcCcccc-cCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcC
Q 012151 265 LSSQDYQRSISWLDKQTPKSVVYISFGSVIA-INKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDG 343 (470)
Q Consensus 265 ~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~-~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~ 343 (470)
+++.+ +.+|++..+++++||+++||... ...+.+..++++++..+.+++|+.++.. .+.+ ++
T Consensus 6 ~l~~~---~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~------~~~~--------~~ 68 (170)
T 2o6l_A 6 PLPKE---MEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK------PDTL--------GL 68 (170)
T ss_dssp CCCHH---HHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC------CTTC--------CT
T ss_pred CCCHH---HHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC------cccC--------CC
Confidence 45555 99999866677899999999963 5677888999999988899999886531 1112 35
Q ss_pred CceeeeccChHhhhccCCcceeecccCchhhHHhhhcCCceecCCCccchhhhHHHHHhhhheeEEcCC-cccHHHHHHH
Q 012151 344 RGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMCEGVPMICQPYLPDQMVNARYVSHFWRVGLHSEW-KLERMEIERA 422 (470)
Q Consensus 344 ~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~-~~~~~~l~~a 422 (470)
|+++.+|+|+.++|.|+.+++||||||+||++||+++|+|+|++|...||..||.++++ .|+|+.++. +++.++|.++
T Consensus 69 ~v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~~~~~~~~l~~~ 147 (170)
T 2o6l_A 69 NTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDFNTMSSTDLLNA 147 (170)
T ss_dssp TEEEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCTTTCCHHHHHHH
T ss_pred cEEEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEeccccCCHHHHHHH
Confidence 66999999999999777777799999999999999999999999999999999999999 599999987 7899999999
Q ss_pred HHHHhccchhHHHHHHHHHHHHHHHH
Q 012151 423 IRRVMVEAEGQEMRARIMHLKEKVDF 448 (470)
Q Consensus 423 i~~vl~~~~~~~~~~~a~~l~~~~~~ 448 (470)
|+++++| ++|+++++++++.+++
T Consensus 148 i~~ll~~---~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 148 LKRVIND---PSYKENVMKLSRIQHD 170 (170)
T ss_dssp HHHHHHC---HHHHHHHHHHC-----
T ss_pred HHHHHcC---HHHHHHHHHHHHHhhC
Confidence 9999999 8999999999998863
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.86 E-value=2.4e-20 Score=182.76 Aligned_cols=332 Identities=11% Similarity=0.056 Sum_probs=202.8
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCC--cccccccCCCCCeeEEecCCC-CCCCcccccCHHHHHH
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNF--SSTNYFSCNYPHFDFHSFPDG-FSETEASVEDVAVFFT 92 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~--~~~~~~~~~~~gi~~~~~~~~-~~~~~~~~~~~~~~~~ 92 (470)
|||++++.+..||..+++.||++|.++||+|++++..... ..... .|+.+..++.. +... .....+.
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~-----~~~~~~~ 76 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPK-----HGIEIDFIRISGLRGK-----GIKALIA 76 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGG-----GTCEEEECCCCCCTTC-----CHHHHHT
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccc-----cCCceEEecCCccCcC-----ccHHHHH
Confidence 7999999887799999999999999999999999986432 12232 57888777622 1111 1111111
Q ss_pred HHHhh--cchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCc--cchHHHHhhcCCCeEEEecccHHHHHHHHhchhhhh
Q 012151 93 AINGK--CIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFW--FFTHTVAADFKLPTIVLQTCGVSGFLAFTAYPILRE 168 (470)
Q Consensus 93 ~~~~~--~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~--~~~~~vA~~~giP~v~~~~~~~~~~~~~~~~~~~~~ 168 (470)
..... ....+...+++ .+||+|+++... ..+..++..+++|+|.......
T Consensus 77 ~~~~~~~~~~~l~~~l~~------------~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~-------------- 130 (364)
T 1f0k_A 77 APLRIFNAWRQARAIMKA------------YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI-------------- 130 (364)
T ss_dssp CHHHHHHHHHHHHHHHHH------------HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS--------------
T ss_pred HHHHHHHHHHHHHHHHHh------------cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCC--------------
Confidence 00000 11122233333 389999998543 3456778899999986432100
Q ss_pred ccCCCCCCCCCCcccCCCCCCCCccccCcccccCchhHHHHHHHHHhhhccccEEEEcChHHhhHHHHHHHhhccCCCCe
Q 012151 169 RAYLPVQDHQSLETPVTEFPPLRVKDIQVLETMDQENVYRFVSAIDTQIMASSGVIWNSYRDLEQAGLGLAHQKYLSIPI 248 (470)
Q Consensus 169 ~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~p~~~~~~~~~~~~~v 248 (470)
++. ..+ -.....+.++..+.. .+ +++
T Consensus 131 ----------------~~~------------------~~~------~~~~~~d~v~~~~~~-------------~~-~~~ 156 (364)
T 1f0k_A 131 ----------------AGL------------------TNK------WLAKIATKVMQAFPG-------------AF-PNA 156 (364)
T ss_dssp ----------------CCH------------------HHH------HHTTTCSEEEESSTT-------------SS-SSC
T ss_pred ----------------CcH------------------HHH------HHHHhCCEEEecChh-------------hc-CCc
Confidence 000 000 001223444443311 12 244
Q ss_pred eeeccCCCCCCCCCCCCCccchhhhhhhcCCCCCCeEEEEEcCcccccCHHHHHHHHHHHHhC--CCCEEEEEcCCCCCC
Q 012151 249 FPIGPLHKCSPASSGSLSSQDYQRSISWLDKQTPKSVVYISFGSVIAINKDGFLEIAWGVANS--RMPFLWVVRPGLVSG 326 (470)
Q Consensus 249 ~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~i~~al~~~--~~~~i~~~~~~~~~~ 326 (470)
..+|.......- .+.. ..+.+...+++++|++..|+.. .......+++|++.+ +.++++.++.+.
T Consensus 157 ~~i~n~v~~~~~-----~~~~---~~~~~~~~~~~~~il~~~g~~~--~~k~~~~li~a~~~l~~~~~~l~i~G~~~--- 223 (364)
T 1f0k_A 157 EVVGNPVRTDVL-----ALPL---PQQRLAGREGPVRVLVVGGSQG--ARILNQTMPQVAAKLGDSVTIWHQSGKGS--- 223 (364)
T ss_dssp EECCCCCCHHHH-----TSCC---HHHHHTTCCSSEEEEEECTTTC--CHHHHHHHHHHHHHHGGGEEEEEECCTTC---
T ss_pred eEeCCccchhhc-----ccch---hhhhcccCCCCcEEEEEcCchH--hHHHHHHHHHHHHHhcCCcEEEEEcCCch---
Confidence 555543221000 0001 1112222234567888888885 344556666777665 345556565431
Q ss_pred CcccCCCchhHHH---Hhc-CCceeeeccC-hHhhhccCCcceeecccCchhhHHhhhcCCceecCCCc---cchhhhHH
Q 012151 327 AEWVEPLPKGFLE---MLD-GRGCIVKWAP-QQEVLAHPAVGGFWTHSGWNSTLESMCEGVPMICQPYL---PDQMVNAR 398 (470)
Q Consensus 327 ~~~~~~~p~~~~~---~~~-~~~~~~~~~p-~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~---~DQ~~na~ 398 (470)
.+.+.+ +.+ +++.+.+|++ ...+|..+++ +|+++|.+++.||+++|+|+|+.|.. .||..|+.
T Consensus 224 -------~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~ 294 (364)
T 1f0k_A 224 -------QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNAL 294 (364)
T ss_dssp -------HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHH
T ss_pred -------HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHH
Confidence 122222 222 5788999984 4669988888 99999999999999999999999988 79999999
Q ss_pred HHHhhhheeEEcCC-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 012151 399 YVSHFWRVGLHSEW-KLERMEIERAIRRVMVEAEGQEMRARIMHLKEKVDFCLRKGGSSHQSLERLIDHILS 469 (470)
Q Consensus 399 rv~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 469 (470)
.+.+. |.|..++. +++.++|+++|.++ | ++.+++..+-+.+..+ ..+..+.++.+++.+++
T Consensus 295 ~~~~~-g~g~~~~~~d~~~~~la~~i~~l--~---~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~y~~ 356 (364)
T 1f0k_A 295 PLEKA-GAAKIIEQPQLSVDAVANTLAGW--S---RETLLTMAERARAASI----PDATERVANEVSRVARA 356 (364)
T ss_dssp HHHHT-TSEEECCGGGCCHHHHHHHHHTC--C---HHHHHHHHHHHHHTCC----TTHHHHHHHHHHHHHTT
T ss_pred HHHhC-CcEEEeccccCCHHHHHHHHHhc--C---HHHHHHHHHHHHHhhc----cCHHHHHHHHHHHHHHH
Confidence 99995 99999887 67799999999998 6 5555444433333322 25666677777776654
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.64 E-value=1.7e-14 Score=134.48 Aligned_cols=116 Identities=11% Similarity=0.074 Sum_probs=89.8
Q ss_pred CCeEEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHh--cCCceeeeccChHh-hhc
Q 012151 282 PKSVVYISFGSVIAINKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEML--DGRGCIVKWAPQQE-VLA 358 (470)
Q Consensus 282 ~~~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~--~~~~~~~~~~p~~~-lL~ 358 (470)
+.+.|+|++|... .......+++++.... ++.++++.+. ...+.+.+.. ..|+.+..|++++. +|.
T Consensus 156 ~~~~ILv~~GG~d--~~~l~~~vl~~L~~~~-~i~vv~G~~~--------~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~ 224 (282)
T 3hbm_A 156 KKYDFFICMGGTD--IKNLSLQIASELPKTK-IISIATSSSN--------PNLKKLQKFAKLHNNIRLFIDHENIAKLMN 224 (282)
T ss_dssp CCEEEEEECCSCC--TTCHHHHHHHHSCTTS-CEEEEECTTC--------TTHHHHHHHHHTCSSEEEEESCSCHHHHHH
T ss_pred cCCeEEEEECCCc--hhhHHHHHHHHhhcCC-CEEEEECCCc--------hHHHHHHHHHhhCCCEEEEeCHHHHHHHHH
Confidence 3568999999764 3346667888887654 5666665541 1223333322 24788899998775 998
Q ss_pred cCCcceeecccCchhhHHhhhcCCceecCCCccchhhhHHHHHhhhheeEEcCC
Q 012151 359 HPAVGGFWTHSGWNSTLESMCEGVPMICQPYLPDQMVNARYVSHFWRVGLHSEW 412 (470)
Q Consensus 359 ~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~ 412 (470)
.+++ +||+|| +|++|+++.|+|+|++|...+|..||+.+++ .|++..+..
T Consensus 225 ~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~-~G~~~~~~~ 274 (282)
T 3hbm_A 225 ESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAK-KGYEVEYKY 274 (282)
T ss_dssp TEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHH-TTCEEECGG
T ss_pred HCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHH-CCCEEEcch
Confidence 8888 999999 8999999999999999999999999999999 499998876
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.62 E-value=9.1e-16 Score=137.30 Aligned_cols=132 Identities=10% Similarity=0.046 Sum_probs=96.5
Q ss_pred CCCCeEEEEEcCcccccCHHHHHHH-----HHHHHhCC-CCEEEEEcCCCCCCCcccCCCchhHHHHh---------c--
Q 012151 280 QTPKSVVYISFGSVIAINKDGFLEI-----AWGVANSR-MPFLWVVRPGLVSGAEWVEPLPKGFLEML---------D-- 342 (470)
Q Consensus 280 ~~~~~~I~vs~Gs~~~~~~~~~~~i-----~~al~~~~-~~~i~~~~~~~~~~~~~~~~~p~~~~~~~---------~-- 342 (470)
.+++++|||+.||... -.+.+..+ +++|.+.+ .+++++++..... ....+.+.. |
T Consensus 25 ~~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~-------~~~~~~~~~~~~~~~~l~p~~ 96 (224)
T 2jzc_A 25 IIEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSS-------EFEHLVQERGGQRESQKIPID 96 (224)
T ss_dssp CCCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCC-------CCCSHHHHHTCEECSCCCSSC
T ss_pred CCCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchh-------hHHHHHHhhhccccccccccc
Confidence 3567899999999842 23334433 48888877 7898888765320 111111111 1
Q ss_pred ---------------C--CceeeeccChH-hhhc-cCCcceeecccCchhhHHhhhcCCceecCCCc----cchhhhHHH
Q 012151 343 ---------------G--RGCIVKWAPQQ-EVLA-HPAVGGFWTHSGWNSTLESMCEGVPMICQPYL----PDQMVNARY 399 (470)
Q Consensus 343 ---------------~--~~~~~~~~p~~-~lL~-~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~----~DQ~~na~r 399 (470)
. ++.+.+|++++ ++|+ .+++ +|||||.||++|++++|+|+|++|.. .||..||++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~ 174 (224)
T 2jzc_A 97 QFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADK 174 (224)
T ss_dssp TTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHH
T ss_pred cccccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHH
Confidence 1 23455888876 6999 9999 99999999999999999999999984 369999999
Q ss_pred HHhhhheeEEcCCcccHHHHHHHHHHH
Q 012151 400 VSHFWRVGLHSEWKLERMEIERAIRRV 426 (470)
Q Consensus 400 v~~~~G~G~~l~~~~~~~~l~~ai~~v 426 (470)
+++ .|+++.+ +++.|.++|+++
T Consensus 175 l~~-~G~~~~~----~~~~L~~~i~~l 196 (224)
T 2jzc_A 175 FVE-LGYVWSC----APTETGLIAGLR 196 (224)
T ss_dssp HHH-HSCCCEE----CSCTTTHHHHHH
T ss_pred HHH-CCCEEEc----CHHHHHHHHHHH
Confidence 999 5998765 557788888777
No 25
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.44 E-value=1.7e-11 Score=120.58 Aligned_cols=342 Identities=13% Similarity=0.032 Sum_probs=188.4
Q ss_pred CCEEEEEcC--C--CccChHHHHHHHHHHHhCCCeEEEEeCCCCCc--ccccccCCCCCeeEEecCCCCCCCcccccCHH
Q 012151 15 GRRVILFPL--P--FQGHINPMLHLASILYSKGFSVTIIHTDFNFS--STNYFSCNYPHFDFHSFPDGFSETEASVEDVA 88 (470)
Q Consensus 15 ~~~il~~~~--~--~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~--~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~ 88 (470)
+|||++++. + ..|.-.-+..|++.| +||+|++++...... .... ...++.+..++...... ..
T Consensus 4 ~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-----~~- 72 (394)
T 3okp_A 4 SRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD---KTLDYEVIRWPRSVMLP-----TP- 72 (394)
T ss_dssp CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH---TTCSSEEEEESSSSCCS-----CH-
T ss_pred CceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc---cccceEEEEcccccccc-----ch-
Confidence 678999875 3 347888899999999 799999999865543 1111 23678888876422111 11
Q ss_pred HHHHHHHhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCc--cchHHHHhhcCCCeEEEecccHHHHHHHHhchhh
Q 012151 89 VFFTAINGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFW--FFTHTVAADFKLPTIVLQTCGVSGFLAFTAYPIL 166 (470)
Q Consensus 89 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~--~~~~~vA~~~giP~v~~~~~~~~~~~~~~~~~~~ 166 (470)
.. ...+...+++ .+||+|++.... .....++..+++|.+++........
T Consensus 73 ~~--------~~~l~~~~~~------------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--------- 123 (394)
T 3okp_A 73 TT--------AHAMAEIIRE------------REIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVG--------- 123 (394)
T ss_dssp HH--------HHHHHHHHHH------------TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHH---------
T ss_pred hh--------HHHHHHHHHh------------cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhh---------
Confidence 00 1122223333 489999976544 3455668889999555332211000
Q ss_pred hhccCCCCCCCCCCcccCCCCCCCCccccCcccccCchhHHHHHHHHHhhhccccEEEEcChHHhhHHHHHHHhhccC--
Q 012151 167 RERAYLPVQDHQSLETPVTEFPPLRVKDIQVLETMDQENVYRFVSAIDTQIMASSGVIWNSYRDLEQAGLGLAHQKYL-- 244 (470)
Q Consensus 167 ~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~p~~~~~~~~~~-- 244 (470)
... ....+.. .......++.++..+....+.- ...+
T Consensus 124 --~~~--------------------------------~~~~~~~--~~~~~~~~d~ii~~s~~~~~~~------~~~~~~ 161 (394)
T 3okp_A 124 --WSM--------------------------------LPGSRQS--LRKIGTEVDVLTYISQYTLRRF------KSAFGS 161 (394)
T ss_dssp --HTT--------------------------------SHHHHHH--HHHHHHHCSEEEESCHHHHHHH------HHHHCS
T ss_pred --hhh--------------------------------cchhhHH--HHHHHHhCCEEEEcCHHHHHHH------HHhcCC
Confidence 000 0000000 1122355778888776654432 2212
Q ss_pred CCCeeeeccCCCCCCCCCCCC-CccchhhhhhhcCCCCCCeEEEEEcCcccccCHHHHHHHHHHHHhC-----CCCEEEE
Q 012151 245 SIPIFPIGPLHKCSPASSGSL-SSQDYQRSISWLDKQTPKSVVYISFGSVIAINKDGFLEIAWGVANS-----RMPFLWV 318 (470)
Q Consensus 245 ~~~v~~vGpl~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~i~~al~~~-----~~~~i~~ 318 (470)
..++..|..-.....- .+ .+.....+.+-+.. +++..+++..|+... .+.+..+++|++.+ +.++++
T Consensus 162 ~~~~~vi~ngv~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~~l~i- 234 (394)
T 3okp_A 162 HPTFEHLPSGVDVKRF---TPATPEDKSATRKKLGF-TDTTPVIACNSRLVP--RKGQDSLIKAMPQVIAARPDAQLLI- 234 (394)
T ss_dssp SSEEEECCCCBCTTTS---CCCCHHHHHHHHHHTTC-CTTCCEEEEESCSCG--GGCHHHHHHHHHHHHHHSTTCEEEE-
T ss_pred CCCeEEecCCcCHHHc---CCCCchhhHHHHHhcCC-CcCceEEEEEecccc--ccCHHHHHHHHHHHHhhCCCeEEEE-
Confidence 1346566543332110 11 11110122233321 233356677788743 33345555555443 344443
Q ss_pred EcCCCCCCCcccCCCchhHH---HHhcCCceeeeccChHh---hhccCCcceeec-----------ccCchhhHHhhhcC
Q 012151 319 VRPGLVSGAEWVEPLPKGFL---EMLDGRGCIVKWAPQQE---VLAHPAVGGFWT-----------HSGWNSTLESMCEG 381 (470)
Q Consensus 319 ~~~~~~~~~~~~~~~p~~~~---~~~~~~~~~~~~~p~~~---lL~~~~~~~~I~-----------HGG~gs~~eal~~G 381 (470)
++.+. ..+.+. ....+++.+.+++|+.+ ++..+++ +|. -|..+++.||+++|
T Consensus 235 ~G~g~---------~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G 303 (394)
T 3okp_A 235 VGSGR---------YESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACG 303 (394)
T ss_dssp ECCCT---------THHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTT
T ss_pred EcCch---------HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcC
Confidence 33221 222222 22347788999998666 6777887 776 55567999999999
Q ss_pred CceecCCCccchhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhccchhHHHHHH-HHHHHHHHHHHHhcCCChHHHH
Q 012151 382 VPMICQPYLPDQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVEAEGQEMRAR-IMHLKEKVDFCLRKGGSSHQSL 460 (470)
Q Consensus 382 vP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~-a~~l~~~~~~~~~~~~~~~~~~ 460 (470)
+|+|+.+.. .....+.+ |.|..++. -+.++++++|.++++| ++.+++ .++..+.+++. -+....+
T Consensus 304 ~PvI~~~~~----~~~e~i~~--~~g~~~~~-~d~~~l~~~i~~l~~~---~~~~~~~~~~~~~~~~~~----~s~~~~~ 369 (394)
T 3okp_A 304 VPVIAGTSG----GAPETVTP--ATGLVVEG-SDVDKLSELLIELLDD---PIRRAAMGAAGRAHVEAE----WSWEIMG 369 (394)
T ss_dssp CCEEECSST----TGGGGCCT--TTEEECCT-TCHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHH----TBHHHHH
T ss_pred CCEEEeCCC----ChHHHHhc--CCceEeCC-CCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHh----CCHHHHH
Confidence 999996653 33333444 57777776 5789999999999998 443322 22223333332 5666777
Q ss_pred HHHHHHHHcC
Q 012151 461 ERLIDHILSF 470 (470)
Q Consensus 461 ~~~~~~l~~~ 470 (470)
+++++.++++
T Consensus 370 ~~~~~~~~~~ 379 (394)
T 3okp_A 370 ERLTNILQSE 379 (394)
T ss_dssp HHHHHHHHSC
T ss_pred HHHHHHHHHh
Confidence 7777777653
No 26
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.38 E-value=2.4e-10 Score=114.21 Aligned_cols=354 Identities=14% Similarity=0.062 Sum_probs=179.6
Q ss_pred CCCEEEEEcC-----------CCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccCCCCCeeEEecCCCCCCCcc
Q 012151 14 NGRRVILFPL-----------PFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTNYFSCNYPHFDFHSFPDGFSETEA 82 (470)
Q Consensus 14 ~~~~il~~~~-----------~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~ 82 (470)
+.|||++++. ...|+-..+..|++.|.++||+|++++.......... .....++.++.++.......
T Consensus 19 ~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~-~~~~~~v~v~~~~~~~~~~~- 96 (438)
T 3c48_A 19 SHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEI-VRVAENLRVINIAAGPYEGL- 96 (438)
T ss_dssp CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSE-EEEETTEEEEEECCSCSSSC-
T ss_pred chheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCccc-ccccCCeEEEEecCCCcccc-
Confidence 4578999995 2347888899999999999999999997543211110 00126788877763211110
Q ss_pred cccCHHHHHHHHHhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCc--cchHHHHhhcCCCeEEEecccHHHHHHH
Q 012151 83 SVEDVAVFFTAINGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFW--FFTHTVAADFKLPTIVLQTCGVSGFLAF 160 (470)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~--~~~~~vA~~~giP~v~~~~~~~~~~~~~ 160 (470)
...+....+..+. ..+++.+.... .+||+|++.... ..+..++..+++|+|..........
T Consensus 97 ~~~~~~~~~~~~~-------~~~~~~~~~~~-------~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~--- 159 (438)
T 3c48_A 97 SKEELPTQLAAFT-------GGMLSFTRREK-------VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVK--- 159 (438)
T ss_dssp CGGGGGGGHHHHH-------HHHHHHHHHHT-------CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHH---
T ss_pred chhHHHHHHHHHH-------HHHHHHHHhcc-------CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccc---
Confidence 0111111111111 11222211111 259999987432 2344567788999987544321110
Q ss_pred HhchhhhhccCCCCCCCCCCcccCCCCCCCCccccCcccccCchhHHHHHHHHHhhhccccEEEEcChHHhhHHHHHHHh
Q 012151 161 TAYPILRERAYLPVQDHQSLETPVTEFPPLRVKDIQVLETMDQENVYRFVSAIDTQIMASSGVIWNSYRDLEQAGLGLAH 240 (470)
Q Consensus 161 ~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~p~~~~~~ 240 (470)
... +.... ......... ........++.++..+....+.-
T Consensus 160 --------~~~------------------~~~~~-------~~~~~~~~~-~~~~~~~~~d~ii~~s~~~~~~~------ 199 (438)
T 3c48_A 160 --------NSY------------------RDDSD-------TPESEARRI-CEQQLVDNADVLAVNTQEEMQDL------ 199 (438)
T ss_dssp --------SCC----------------------C-------CHHHHHHHH-HHHHHHHHCSEEEESSHHHHHHH------
T ss_pred --------ccc------------------ccccC-------CcchHHHHH-HHHHHHhcCCEEEEcCHHHHHHH------
Confidence 000 00000 000000000 01122355788888886655432
Q ss_pred hccCC---CCeeeeccCCCCCCCCCCCCCccc-hhhhhhhcCCCCCCeEEEEEcCcccccCHHHHHHHHHHHHhC-----
Q 012151 241 QKYLS---IPIFPIGPLHKCSPASSGSLSSQD-YQRSISWLDKQTPKSVVYISFGSVIAINKDGFLEIAWGVANS----- 311 (470)
Q Consensus 241 ~~~~~---~~v~~vGpl~~~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~i~~al~~~----- 311 (470)
...++ .++..|..-.....- .+.+.. -..+.+-+.- +.+..+++..|+... .+.+..+++|++.+
T Consensus 200 ~~~~g~~~~k~~vi~ngvd~~~~---~~~~~~~~~~~r~~~~~-~~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~p 273 (438)
T 3c48_A 200 MHHYDADPDRISVVSPGADVELY---SPGNDRATERSRRELGI-PLHTKVVAFVGRLQP--FKGPQVLIKAVAALFDRDP 273 (438)
T ss_dssp HHHHCCCGGGEEECCCCCCTTTS---CCC----CHHHHHHTTC-CSSSEEEEEESCBSG--GGCHHHHHHHHHHHHHHCT
T ss_pred HHHhCCChhheEEecCCcccccc---CCcccchhhhhHHhcCC-CCCCcEEEEEeeecc--cCCHHHHHHHHHHHHhhCC
Confidence 22111 235555543332110 000000 0012222221 223456677788753 23344555555543
Q ss_pred CCCE-EEEEcCCCCCCCcccCCCchhHH---HH--hcCCceeeeccChH---hhhccCCcceeeccc----CchhhHHhh
Q 012151 312 RMPF-LWVVRPGLVSGAEWVEPLPKGFL---EM--LDGRGCIVKWAPQQ---EVLAHPAVGGFWTHS----GWNSTLESM 378 (470)
Q Consensus 312 ~~~~-i~~~~~~~~~~~~~~~~~p~~~~---~~--~~~~~~~~~~~p~~---~lL~~~~~~~~I~HG----G~gs~~eal 378 (470)
+.++ ++.++.....+ ...+.+. ++ ..+++.+.+++|+. .+|..+++ +|.-. ...++.||+
T Consensus 274 ~~~~~l~i~G~~~~~g-----~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eam 346 (438)
T 3c48_A 274 DRNLRVIICGGPSGPN-----ATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQ 346 (438)
T ss_dssp TCSEEEEEECCBC-----------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHH
T ss_pred CcceEEEEEeCCCCCC-----cHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHH
Confidence 1233 33333311001 1122222 22 23678899999875 47878888 77543 356899999
Q ss_pred hcCCceecCCCccchhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhccch-hHHHHHHHHHHHHH
Q 012151 379 CEGVPMICQPYLPDQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVEAE-GQEMRARIMHLKEK 445 (470)
Q Consensus 379 ~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~-~~~~~~~a~~l~~~ 445 (470)
++|+|+|+.+ .......+++. +.|..++. -+.++++++|.++++|.+ -..+.+++++..+.
T Consensus 347 a~G~PvI~~~----~~~~~e~i~~~-~~g~~~~~-~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~ 408 (438)
T 3c48_A 347 ASGTPVIAAR----VGGLPIAVAEG-ETGLLVDG-HSPHAWADALATLLDDDETRIRMGEDAVEHART 408 (438)
T ss_dssp HTTCCEEEES----CTTHHHHSCBT-TTEEEESS-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred HcCCCEEecC----CCChhHHhhCC-CcEEECCC-CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh
Confidence 9999999965 34556667773 78888876 578999999999999822 12334444444444
No 27
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.35 E-value=9.8e-10 Score=109.54 Aligned_cols=385 Identities=14% Similarity=0.070 Sum_probs=189.0
Q ss_pred CCCEEEEEcCC-----CccChHHHHHHHHHHHhCCCeEEEEeCCCCCccccc---------------ccCCCCCeeEEec
Q 012151 14 NGRRVILFPLP-----FQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTNY---------------FSCNYPHFDFHSF 73 (470)
Q Consensus 14 ~~~~il~~~~~-----~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~---------------~~~~~~gi~~~~~ 73 (470)
++|||++++.. ..|--.-+..||+.|+++||+|+++++......... ......|+.+..+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 47899999843 235555689999999999999999997533221100 0001257777777
Q ss_pred CCCCCCCcccccCHHHH-HHHHHhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCc--cchHHHHhhcCCCeEEEe
Q 012151 74 PDGFSETEASVEDVAVF-FTAINGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFW--FFTHTVAADFKLPTIVLQ 150 (470)
Q Consensus 74 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~--~~~~~vA~~~giP~v~~~ 150 (470)
+...-............ ...+. .....+...++.+.... .+||+|.+.... ..+..++...++|+|...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-------~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~ 152 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKAV-TFGRASVLLLNDLLREE-------PLPDVVHFHDWHTVFAGALIKKYFKIPAVFTI 152 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHHH-HHHHHHHHHHHHHTTTS-------CCCSEEEEESGGGHHHHHHHHHHHCCCEEEEE
T ss_pred cchhccccccccCCcchhhhhhH-HHHHHHHHHHHHHhccC-------CCCeEEEecchhhhhhHHHHhhccCCCEEEEe
Confidence 64110000000111111 11111 11223333444443211 589999987543 234566788899998854
Q ss_pred cccHHHHHHHHhchh-hhhccCCCCCCCCCCcccCCCCCCCCccccCcccccCchhHHHHHHHHHhhhccccEEEEcChH
Q 012151 151 TCGVSGFLAFTAYPI-LRERAYLPVQDHQSLETPVTEFPPLRVKDIQVLETMDQENVYRFVSAIDTQIMASSGVIWNSYR 229 (470)
Q Consensus 151 ~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~ 229 (470)
...... ..+. ..... . +......... .+ .......++.++..|..
T Consensus 153 h~~~~~-----~~~~~~~~~~--------~----~~~~~~~~~~-----------~~------~~~~~~~ad~ii~~S~~ 198 (439)
T 3fro_A 153 HRLNKS-----KLPAFYFHEA--------G----LSELAPYPDI-----------DP------EHTGGYIADIVTTVSRG 198 (439)
T ss_dssp SCCCCC-----CEEHHHHHHT--------T----CGGGCCSSEE-----------CH------HHHHHHHCSEEEESCHH
T ss_pred cccccc-----cCchHHhCcc--------c----ccccccccee-----------eH------hhhhhhhccEEEecCHH
Confidence 432100 0000 00000 0 0000000000 00 11223457777887765
Q ss_pred HhhHHHHHHHhhccCCCCeeeeccCCCCCCCCCCCCCc----cchhhhhhhcCCCCCCeEEEEEcCccc-ccCHHHHHHH
Q 012151 230 DLEQAGLGLAHQKYLSIPIFPIGPLHKCSPASSGSLSS----QDYQRSISWLDKQTPKSVVYISFGSVI-AINKDGFLEI 304 (470)
Q Consensus 230 ~le~p~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~----~~~~~l~~~l~~~~~~~~I~vs~Gs~~-~~~~~~~~~i 304 (470)
..+.- ...+ . ..+.++..|..-.....-.+ ...+ .....+.+-+.- +++ .+++..|+.. . .+.+..+
T Consensus 199 ~~~~~-~~~~-~-~~~~~i~vi~ngvd~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~-~~i~~~G~~~~~--~Kg~~~l 270 (439)
T 3fro_A 199 YLIDE-WGFF-R-NFEGKITYVFNGIDCSFWNE-SYLTGSRDERKKSLLSKFGM-DEG-VTFMFIGRFDRG--QKGVDVL 270 (439)
T ss_dssp HHHHT-HHHH-G-GGTTSEEECCCCCCTTTSCG-GGSCSCHHHHHHHHHHHHTC-CSC-EEEEEECCSSCT--TBCHHHH
T ss_pred HHHHH-hhhh-h-hcCCceeecCCCCCchhcCc-ccccchhhhhHHHHHHHcCC-CCC-cEEEEEcccccc--cccHHHH
Confidence 55541 1100 0 11245555554332210000 0000 010112222321 333 6777788886 3 2233444
Q ss_pred HHHHHhC---C--CCEEEE-EcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHh---hhccCCcceeecc----cCc
Q 012151 305 AWGVANS---R--MPFLWV-VRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQE---VLAHPAVGGFWTH----SGW 371 (470)
Q Consensus 305 ~~al~~~---~--~~~i~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~---lL~~~~~~~~I~H----GG~ 371 (470)
++|++.+ . ..+-+. ++.+... ....-....++.++++.+.+|+|+.+ ++..+++ +|.- |-.
T Consensus 271 i~a~~~l~~~~~~~~~~l~i~G~g~~~----~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~ 344 (439)
T 3fro_A 271 LKAIEILSSKKEFQEMRFIIIGKGDPE----LEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFG 344 (439)
T ss_dssp HHHHHHHHTSGGGGGEEEEEECCCCHH----HHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSC
T ss_pred HHHHHHHHhcccCCCeEEEEEcCCChh----HHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCcc
Confidence 4444443 1 233333 3322100 00011122233344445568899865 6777777 7743 335
Q ss_pred hhhHHhhhcCCceecCCCccchhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhc-cch-hHHHHHHHHHHHHHHHHH
Q 012151 372 NSTLESMCEGVPMICQPYLPDQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMV-EAE-GQEMRARIMHLKEKVDFC 449 (470)
Q Consensus 372 gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~-~~~-~~~~~~~a~~l~~~~~~~ 449 (470)
.++.||+++|+|+|+.. .......++. |.|..++. -+.++++++|.++++ +.+ -..+.+++++..+.
T Consensus 345 ~~~~EAma~G~Pvi~s~----~~~~~e~~~~--~~g~~~~~-~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~---- 413 (439)
T 3fro_A 345 LVALEAMCLGAIPIASA----VGGLRDIITN--ETGILVKA-GDPGELANAILKALELSRSDLSKFRENCKKRAMS---- 413 (439)
T ss_dssp HHHHHHHHTTCEEEEES----STHHHHHCCT--TTCEEECT-TCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHT----
T ss_pred HHHHHHHHCCCCeEEcC----CCCcceeEEc--CceEEeCC-CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhh----
Confidence 79999999999999954 3444444444 78888887 688999999999998 621 12333333333221
Q ss_pred HhcCCChHHHHHHHHHHHHc
Q 012151 450 LRKGGSSHQSLERLIDHILS 469 (470)
Q Consensus 450 ~~~~~~~~~~~~~~~~~l~~ 469 (470)
-+....++++++.+++
T Consensus 414 ----~s~~~~~~~~~~~~~~ 429 (439)
T 3fro_A 414 ----FSWEKSAERYVKAYTG 429 (439)
T ss_dssp ----SCHHHHHHHHHHHHHT
T ss_pred ----CcHHHHHHHHHHHHHH
Confidence 5566677777776654
No 28
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.32 E-value=1.9e-11 Score=120.06 Aligned_cols=161 Identities=13% Similarity=0.141 Sum_probs=97.7
Q ss_pred CCeEEEEEcCcccccCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCCCCcccCCCchhHHHHh--cCCceeeeccCh-
Q 012151 282 PKSVVYISFGSVIAINKDGFLEIAWGVANS-----RMPFLWVVRPGLVSGAEWVEPLPKGFLEML--DGRGCIVKWAPQ- 353 (470)
Q Consensus 282 ~~~~I~vs~Gs~~~~~~~~~~~i~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~--~~~~~~~~~~p~- 353 (470)
++++++++.|...... +.+..+++|++.. +.++++..+.+. .+.+.+.+.. .+++.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~~--------~~~~~l~~~~~~~~~v~~~g~~~~~ 274 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLNP--------NVREPVNRILGHVKNVILIDPQEYL 274 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCH--------HHHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCCH--------HHHHHHHHHhhcCCCEEEeCCCCHH
Confidence 4567888888765321 3455566666543 334444322110 0112222222 257888776665
Q ss_pred --HhhhccCCcceeecccCchhhHHhhhcCCceecCCCccchhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhccch
Q 012151 354 --QEVLAHPAVGGFWTHSGWNSTLESMCEGVPMICQPYLPDQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVEAE 431 (470)
Q Consensus 354 --~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~ 431 (470)
.++|..+++ ||+.+| +++.||+++|+|+|+.+..++..+ +.+. |.|..++. ++++|+++|.++++|
T Consensus 275 ~~~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v~~-g~g~lv~~--d~~~la~~i~~ll~d-- 342 (384)
T 1vgv_A 275 PFVWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AVTA-GTVRLVGT--DKQRIVEEVTRLLKD-- 342 (384)
T ss_dssp HHHHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HHHH-TSEEEECS--SHHHHHHHHHHHHHC--
T ss_pred HHHHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcch----hhhC-CceEEeCC--CHHHHHHHHHHHHhC--
Confidence 457888888 999985 458899999999999987444332 4554 88988876 889999999999998
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 012151 432 GQEMRARIMHLKEKVDFCLRKGGSSHQSLERLIDHIL 468 (470)
Q Consensus 432 ~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 468 (470)
++.+++ |++..++. ....+..+.++.+.+.++
T Consensus 343 -~~~~~~---~~~~~~~~-~~~~~~~~i~~~~~~~~~ 374 (384)
T 1vgv_A 343 -ENEYQA---MSRAHNPY-GDGQACSRILEALKNNRI 374 (384)
T ss_dssp -HHHHHH---HHSSCCTT-CCSCHHHHHHHHHHHTCC
T ss_pred -hHHHhh---hhhccCCC-cCCCHHHHHHHHHHHHHH
Confidence 544433 33332221 222444455555555443
No 29
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.30 E-value=3.5e-09 Score=104.26 Aligned_cols=351 Identities=13% Similarity=0.042 Sum_probs=180.1
Q ss_pred CCCCCCCCCCEEEEEcCCCc-cChHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccCCCCCeeEEecCCCCCCCccccc
Q 012151 7 SCRMVPRNGRRVILFPLPFQ-GHINPMLHLASILYSKGFSVTIIHTDFNFSSTNYFSCNYPHFDFHSFPDGFSETEASVE 85 (470)
Q Consensus 7 ~~~m~~~~~~~il~~~~~~~-GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~ 85 (470)
+..|.. ++....+|.. |.-.-+..|++.|.++||+|++++......... ...++.+..++.........
T Consensus 11 ~~~~~~----~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~-- 80 (394)
T 2jjm_A 11 HHHMKL----KIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNK----VYPNIYFHEVTVNQYSVFQY-- 80 (394)
T ss_dssp ----CC----EEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC----C----CCTTEEEECCCCC----CCS--
T ss_pred hhhhee----eeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcccc----cCCceEEEeccccccccccc--
Confidence 344555 7888888765 566778899999999999999999853322111 33677777664211000000
Q ss_pred CHHHHHHHHHhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCcc--chHHHHh-hc--CCCeEEEecccHHHHHHH
Q 012151 86 DVAVFFTAINGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFWF--FTHTVAA-DF--KLPTIVLQTCGVSGFLAF 160 (470)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~~--~~~~vA~-~~--giP~v~~~~~~~~~~~~~ 160 (470)
... .+. ....+...+++. +||+|++..... ....++. .+ ++|+|........
T Consensus 81 ~~~-~~~-----~~~~l~~~l~~~------------~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~----- 137 (394)
T 2jjm_A 81 PPY-DLA-----LASKMAEVAQRE------------NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI----- 137 (394)
T ss_dssp CCH-HHH-----HHHHHHHHHHHH------------TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH-----
T ss_pred ccc-cHH-----HHHHHHHHHHHc------------CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc-----
Confidence 000 010 111223334443 899999874332 2233333 33 5998875432110
Q ss_pred HhchhhhhccCCCCCCCCCCcccCCCCCCCCccccCcccccCchhHHHHHHHHHhhhccccEEEEcChHHhhHHHHHHHh
Q 012151 161 TAYPILRERAYLPVQDHQSLETPVTEFPPLRVKDIQVLETMDQENVYRFVSAIDTQIMASSGVIWNSYRDLEQAGLGLAH 240 (470)
Q Consensus 161 ~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~p~~~~~~ 240 (470)
. .... . .. ...+. ......++.++..+....+.-
T Consensus 138 -~--------~~~~-~------------~~------------~~~~~------~~~~~~ad~ii~~s~~~~~~~------ 171 (394)
T 2jjm_A 138 -T--------VLGS-D------------PS------------LNNLI------RFGIEQSDVVTAVSHSLINET------ 171 (394)
T ss_dssp -H--------TTTT-C------------TT------------THHHH------HHHHHHSSEEEESCHHHHHHH------
T ss_pred -c--------ccCC-C------------HH------------HHHHH------HHHHhhCCEEEECCHHHHHHH------
Confidence 0 0000 0 00 00011 112345778888776554432
Q ss_pred hccCC--CCeeeeccCCCCCCCCCCCCCccchhhhhhhcCCCCCCeEEEEEcCcccccCHHHHHHHHHHHHhC----CCC
Q 012151 241 QKYLS--IPIFPIGPLHKCSPASSGSLSSQDYQRSISWLDKQTPKSVVYISFGSVIAINKDGFLEIAWGVANS----RMP 314 (470)
Q Consensus 241 ~~~~~--~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~i~~al~~~----~~~ 314 (470)
...++ .++..+..-.....- .+. .. ..+.+-+.. +++..+++..|+... .+.+..+++|++.+ +.+
T Consensus 172 ~~~~~~~~~~~vi~ngv~~~~~---~~~-~~-~~~~~~~~~-~~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~ 243 (394)
T 2jjm_A 172 HELVKPNKDIQTVYNFIDERVY---FKR-DM-TQLKKEYGI-SESEKILIHISNFRK--VKRVQDVVQAFAKIVTEVDAK 243 (394)
T ss_dssp HHHTCCSSCEEECCCCCCTTTC---CCC-CC-HHHHHHTTC-C---CEEEEECCCCG--GGTHHHHHHHHHHHHHSSCCE
T ss_pred HHhhCCcccEEEecCCccHHhc---CCc-ch-HHHHHHcCC-CCCCeEEEEeecccc--ccCHHHHHHHHHHHHhhCCCE
Confidence 22222 356666544332110 000 11 112222321 123345566788753 33455555555543 333
Q ss_pred EEEEEcCCCCCCCcccCCCchhHHHHh-----cCCceeeeccC-hHhhhccCCcceee----cccCchhhHHhhhcCCce
Q 012151 315 FLWVVRPGLVSGAEWVEPLPKGFLEML-----DGRGCIVKWAP-QQEVLAHPAVGGFW----THSGWNSTLESMCEGVPM 384 (470)
Q Consensus 315 ~i~~~~~~~~~~~~~~~~~p~~~~~~~-----~~~~~~~~~~p-~~~lL~~~~~~~~I----~HGG~gs~~eal~~GvP~ 384 (470)
+ +.++.+. ..+.+.+.. .+++.+.++.. ...+|..+++ +| .-|..+++.||+++|+|+
T Consensus 244 l-~i~G~g~---------~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pv 311 (394)
T 2jjm_A 244 L-LLVGDGP---------EFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPC 311 (394)
T ss_dssp E-EEECCCT---------THHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCE
T ss_pred E-EEECCch---------HHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCE
Confidence 3 3343221 112222221 25667777654 3458888888 77 556678999999999999
Q ss_pred ecCCCccchhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhccchhHHHHHH-HHHHHHHHHHHHhcCCChHHHHHHH
Q 012151 385 ICQPYLPDQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVEAEGQEMRAR-IMHLKEKVDFCLRKGGSSHQSLERL 463 (470)
Q Consensus 385 v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~-a~~l~~~~~~~~~~~~~~~~~~~~~ 463 (470)
|+.+.. .....+.+. +.|..++. -+.++++++|.++++| +..+++ .++.++.+.+. -+....++++
T Consensus 312 I~~~~~----~~~e~v~~~-~~g~~~~~-~d~~~la~~i~~l~~~---~~~~~~~~~~~~~~~~~~----~s~~~~~~~~ 378 (394)
T 2jjm_A 312 IGTRVG----GIPEVIQHG-DTGYLCEV-GDTTGVADQAIQLLKD---EELHRNMGERARESVYEQ----FRSEKIVSQY 378 (394)
T ss_dssp EEECCT----TSTTTCCBT-TTEEEECT-TCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHH----SCHHHHHHHH
T ss_pred EEecCC----ChHHHhhcC-CceEEeCC-CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHh----CCHHHHHHHH
Confidence 997653 333445553 67887776 5789999999999998 543332 22222333232 5566667777
Q ss_pred HHHHHc
Q 012151 464 IDHILS 469 (470)
Q Consensus 464 ~~~l~~ 469 (470)
++.+++
T Consensus 379 ~~~~~~ 384 (394)
T 2jjm_A 379 ETIYYD 384 (394)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666654
No 30
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.30 E-value=6.5e-10 Score=109.76 Aligned_cols=339 Identities=11% Similarity=0.018 Sum_probs=175.5
Q ss_pred CCCEEEEEcCC---C-ccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccCCCCCeeEEecCCCCCCCcccccCHHH
Q 012151 14 NGRRVILFPLP---F-QGHINPMLHLASILYSKGFSVTIIHTDFNFSSTNYFSCNYPHFDFHSFPDGFSETEASVEDVAV 89 (470)
Q Consensus 14 ~~~~il~~~~~---~-~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~ 89 (470)
++|||++++.. . .|.-.-+..|++.|.++||+|++++..........+. ...+ .+..++... ....
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~-~~~~-~~~~~~~~~--------~~~~ 88 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYV-VSGG-KAVPIPYNG--------SVAR 88 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTE-EECC-CCC------------------
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCccc-ccCC-cEEeccccC--------Cccc
Confidence 56899999843 2 4666789999999999999999999865433111100 0011 222222000 0000
Q ss_pred HHHHHHhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCcc--chHHHHhhcCCCeEEEecccHHHHHHHHhchhhh
Q 012151 90 FFTAINGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFWF--FTHTVAADFKLPTIVLQTCGVSGFLAFTAYPILR 167 (470)
Q Consensus 90 ~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~~--~~~~vA~~~giP~v~~~~~~~~~~~~~~~~~~~~ 167 (470)
+. +.......+...+++. +||+|++..... .+..++...++|+|............
T Consensus 89 -~~-~~~~~~~~l~~~l~~~------------~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~-------- 146 (406)
T 2gek_A 89 -LR-FGPATHRKVKKWIAEG------------DFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTKSLT-------- 146 (406)
T ss_dssp ----CCHHHHHHHHHHHHHH------------CCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCSHHH--------
T ss_pred -cc-ccHHHHHHHHHHHHhc------------CCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchhhhh--------
Confidence 00 0000112223333332 899999875442 34566777899998854331000000
Q ss_pred hccCCCCCCCCCCcccCCCCCCCCccccCcccccCchhHHHHHHHHHhhhccccEEEEcChHHhhHHHHHHHhhccCCC-
Q 012151 168 ERAYLPVQDHQSLETPVTEFPPLRVKDIQVLETMDQENVYRFVSAIDTQIMASSGVIWNSYRDLEQAGLGLAHQKYLSI- 246 (470)
Q Consensus 168 ~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~p~~~~~~~~~~~~- 246 (470)
...+.+. .......++.++..+....+.- ...++.
T Consensus 147 -----------------------------------~~~~~~~---~~~~~~~~d~ii~~s~~~~~~~------~~~~~~~ 182 (406)
T 2gek_A 147 -----------------------------------LSVFQGI---LRPYHEKIIGRIAVSDLARRWQ------MEALGSD 182 (406)
T ss_dssp -----------------------------------HHHHHST---THHHHTTCSEEEESSHHHHHHH------HHHHSSC
T ss_pred -----------------------------------HHHHHHH---HHHHHhhCCEEEECCHHHHHHH------HHhcCCC
Confidence 0000000 0022355777777775544432 222222
Q ss_pred CeeeeccCCCCCCCCCCCCCccchhhhhhhcCCCCCCeEEEEEcCcc-cccCHHHHHHHHHHHHhC-----CCCEEEEEc
Q 012151 247 PIFPIGPLHKCSPASSGSLSSQDYQRSISWLDKQTPKSVVYISFGSV-IAINKDGFLEIAWGVANS-----RMPFLWVVR 320 (470)
Q Consensus 247 ~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~-~~~~~~~~~~i~~al~~~-----~~~~i~~~~ 320 (470)
++ .+..-.....- ...+.. . . ...+..+++..|+. .. .+.+..+++|++.+ +.++ +.++
T Consensus 183 ~~-vi~~~v~~~~~---~~~~~~----~---~-~~~~~~~i~~~G~~~~~--~Kg~~~li~a~~~l~~~~~~~~l-~i~G 247 (406)
T 2gek_A 183 AV-EIPNGVDVASF---ADAPLL----D---G-YPREGRTVLFLGRYDEP--RKGMAVLLAALPKLVARFPDVEI-LIVG 247 (406)
T ss_dssp EE-ECCCCBCHHHH---HTCCCC----T---T-CSCSSCEEEEESCTTSG--GGCHHHHHHHHHHHHTTSTTCEE-EEES
T ss_pred cE-EecCCCChhhc---CCCchh----h---h-ccCCCeEEEEEeeeCcc--ccCHHHHHHHHHHHHHHCCCeEE-EEEc
Confidence 24 44432211000 000000 0 0 01122456667887 42 23344555555543 3333 3333
Q ss_pred CCCCCCCcccCCCchhHHHHh---cCCceeeeccChH---hhhccCCcceeecc----cC-chhhHHhhhcCCceecCCC
Q 012151 321 PGLVSGAEWVEPLPKGFLEML---DGRGCIVKWAPQQ---EVLAHPAVGGFWTH----SG-WNSTLESMCEGVPMICQPY 389 (470)
Q Consensus 321 ~~~~~~~~~~~~~p~~~~~~~---~~~~~~~~~~p~~---~lL~~~~~~~~I~H----GG-~gs~~eal~~GvP~v~~P~ 389 (470)
.+. . +.+.+.. .+++.+.+++++. .+|..+++ +|.- .| ..++.||+++|+|+|+.+.
T Consensus 248 ~~~---------~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~ 315 (406)
T 2gek_A 248 RGD---------E-DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL 315 (406)
T ss_dssp CSC---------H-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC
T ss_pred CCc---------H-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC
Confidence 321 1 2232222 4678889999975 58888888 6643 34 4489999999999999654
Q ss_pred ccchhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 012151 390 LPDQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVEAEGQEMRARIMHLKEKVDFCLRKGGSSHQSLERLIDHIL 468 (470)
Q Consensus 390 ~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 468 (470)
......+.+. +.|...+. -+.++++++|.++++| +..+++ +++..++.+. .-+....++.+++.++
T Consensus 316 ----~~~~e~i~~~-~~g~~~~~-~d~~~l~~~i~~l~~~---~~~~~~---~~~~~~~~~~-~~s~~~~~~~~~~~~~ 381 (406)
T 2gek_A 316 ----DAFRRVLADG-DAGRLVPV-DDADGMAAALIGILED---DQLRAG---YVARASERVH-RYDWSVVSAQIMRVYE 381 (406)
T ss_dssp ----HHHHHHHTTT-TSSEECCT-TCHHHHHHHHHHHHHC---HHHHHH---HHHHHHHHGG-GGBHHHHHHHHHHHHH
T ss_pred ----CcHHHHhcCC-CceEEeCC-CCHHHHHHHHHHHHcC---HHHHHH---HHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 5666777773 78888876 5789999999999998 543332 2222222222 2455556666655554
No 31
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.27 E-value=2.7e-09 Score=108.59 Aligned_cols=134 Identities=14% Similarity=0.106 Sum_probs=86.0
Q ss_pred EEEEEcCcccccCHHHHHHHHHHHHhCCC----C-EEEEEcCCCCCCCcccCCC-------chhHHH---H--hcCCcee
Q 012151 285 VVYISFGSVIAINKDGFLEIAWGVANSRM----P-FLWVVRPGLVSGAEWVEPL-------PKGFLE---M--LDGRGCI 347 (470)
Q Consensus 285 ~I~vs~Gs~~~~~~~~~~~i~~al~~~~~----~-~i~~~~~~~~~~~~~~~~~-------p~~~~~---~--~~~~~~~ 347 (470)
.+++..|+.. ..+.+..+++|++.+.. . .++.++.......+ .+.+ .+.+.+ + ..+++.+
T Consensus 263 ~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~-y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~ 339 (499)
T 2r60_A 263 PAIIASSRLD--QKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFED-YSRAGQEEKEILGKIIELIDNNDCRGKVSM 339 (499)
T ss_dssp CEEEECSCCC--GGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTB-CTTSCHHHHHHHHHHHHHHHHTTCBTTEEE
T ss_pred cEEEEeecCc--cccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccc-cccccccchHHHHHHHHHHHhcCCCceEEE
Confidence 4567778875 34557778888877632 2 34455441100000 0001 122222 1 2367889
Q ss_pred eeccChHh---hhccC----Ccceeecc----cCchhhHHhhhcCCceecCCCccchhhhHHHHHhhhheeEEcCCcccH
Q 012151 348 VKWAPQQE---VLAHP----AVGGFWTH----SGWNSTLESMCEGVPMICQPYLPDQMVNARYVSHFWRVGLHSEWKLER 416 (470)
Q Consensus 348 ~~~~p~~~---lL~~~----~~~~~I~H----GG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~ 416 (470)
.+++|+.+ ++..+ ++ +|.- |-..++.||+++|+|+|+.. .......+... ..|..++. -+.
T Consensus 340 ~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~----~~g~~e~v~~~-~~g~l~~~-~d~ 411 (499)
T 2r60_A 340 FPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTR----NGGPAEILDGG-KYGVLVDP-EDP 411 (499)
T ss_dssp EECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEES----SBHHHHHTGGG-TSSEEECT-TCH
T ss_pred CCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEec----CCCHHHHhcCC-ceEEEeCC-CCH
Confidence 99998765 67777 77 7743 33468999999999999964 34555666663 68888877 578
Q ss_pred HHHHHHHHHHhcc
Q 012151 417 MEIERAIRRVMVE 429 (470)
Q Consensus 417 ~~l~~ai~~vl~~ 429 (470)
++++++|.++++|
T Consensus 412 ~~la~~i~~ll~~ 424 (499)
T 2r60_A 412 EDIARGLLKAFES 424 (499)
T ss_dssp HHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999998
No 32
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.26 E-value=6.5e-11 Score=115.96 Aligned_cols=134 Identities=11% Similarity=0.105 Sum_probs=86.9
Q ss_pred CCeEEEEEcCcccccCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCCCCcccCCCchhHHHHh--cCCceeeeccCh-
Q 012151 282 PKSVVYISFGSVIAINKDGFLEIAWGVANS-----RMPFLWVVRPGLVSGAEWVEPLPKGFLEML--DGRGCIVKWAPQ- 353 (470)
Q Consensus 282 ~~~~I~vs~Gs~~~~~~~~~~~i~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~--~~~~~~~~~~p~- 353 (470)
++++|+++.|..... +.+..+++|++.+ +..+++..+.+. .+.+.+.+.. .+++.+.+++++
T Consensus 197 ~~~~vl~~~gr~~~~--k~~~~ll~a~~~l~~~~~~~~lv~~~g~~~--------~~~~~l~~~~~~~~~v~~~g~~g~~ 266 (376)
T 1v4v_A 197 EGPYVTVTMHRRENW--PLLSDLAQALKRVAEAFPHLTFVYPVHLNP--------VVREAVFPVLKGVRNFVLLDPLEYG 266 (376)
T ss_dssp SSCEEEECCCCGGGG--GGHHHHHHHHHHHHHHCTTSEEEEECCSCH--------HHHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCcccch--HHHHHHHHHHHHHHhhCCCeEEEEECCCCH--------HHHHHHHHHhccCCCEEEECCCCHH
Confidence 345777777765322 1455566776543 344444333221 0112222221 257888866655
Q ss_pred --HhhhccCCcceeecccCchhhHHhhhcCCceecCCCccchhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhccch
Q 012151 354 --QEVLAHPAVGGFWTHSGWNSTLESMCEGVPMICQPYLPDQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVEAE 431 (470)
Q Consensus 354 --~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~ 431 (470)
..+|+.+++ ||+.+| |.+.||+++|+|+|+.+...++.. +.+. |.|..++. ++++|+++|.++++|
T Consensus 267 ~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~-g~g~lv~~--d~~~la~~i~~ll~d-- 334 (376)
T 1v4v_A 267 SMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKA-GILKLAGT--DPEGVYRVVKGLLEN-- 334 (376)
T ss_dssp HHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHH-TSEEECCS--CHHHHHHHHHHHHTC--
T ss_pred HHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcC-CceEECCC--CHHHHHHHHHHHHhC--
Confidence 468888888 999884 556699999999999887666665 3454 88887753 889999999999998
Q ss_pred hHHHHHH
Q 012151 432 GQEMRAR 438 (470)
Q Consensus 432 ~~~~~~~ 438 (470)
++.+++
T Consensus 335 -~~~~~~ 340 (376)
T 1v4v_A 335 -PEELSR 340 (376)
T ss_dssp -HHHHHH
T ss_pred -hHhhhh
Confidence 554443
No 33
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.25 E-value=1.2e-10 Score=114.93 Aligned_cols=159 Identities=10% Similarity=0.093 Sum_probs=95.8
Q ss_pred CCCeEEEEEcCcccccCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCCCCcccCCCchhHHHH--hcCCceeeeccCh
Q 012151 281 TPKSVVYISFGSVIAINKDGFLEIAWGVANS-----RMPFLWVVRPGLVSGAEWVEPLPKGFLEM--LDGRGCIVKWAPQ 353 (470)
Q Consensus 281 ~~~~~I~vs~Gs~~~~~~~~~~~i~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~~~~~p~ 353 (470)
+++++|+++.+-..... +.+..+++|++.+ +.++++.++.+. .+.+.+.+. ..+++.+.+++++
T Consensus 228 ~~~~~vlv~~hR~~~~~-~~~~~ll~A~~~l~~~~~~~~~v~~~g~~~--------~~~~~l~~~~~~~~~v~~~~~lg~ 298 (396)
T 3dzc_A 228 ASKKLILVTGHRRESFG-GGFERICQALITTAEQHPECQILYPVHLNP--------NVREPVNKLLKGVSNIVLIEPQQY 298 (396)
T ss_dssp TTSEEEEEECSCBCCCT-THHHHHHHHHHHHHHHCTTEEEEEECCBCH--------HHHHHHHHHTTTCTTEEEECCCCH
T ss_pred CCCCEEEEEECCcccch-hHHHHHHHHHHHHHHhCCCceEEEEeCCCh--------HHHHHHHHHHcCCCCEEEeCCCCH
Confidence 34667777763222111 2356677777653 345555443220 011223222 1357788777753
Q ss_pred ---HhhhccCCcceeecccCchhhHHhhhcCCceecCCCccchhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhccc
Q 012151 354 ---QEVLAHPAVGGFWTHSGWNSTLESMCEGVPMICQPYLPDQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVEA 430 (470)
Q Consensus 354 ---~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 430 (470)
..+++.+++ +|+-+| |.+.||+++|+|+|+..-..+++. +.+. |.++.+.. ++++|.+++.++++|
T Consensus 299 ~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e----~v~~-G~~~lv~~--d~~~l~~ai~~ll~d- 367 (396)
T 3dzc_A 299 LPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERPE----AVAA-GTVKLVGT--NQQQICDALSLLLTD- 367 (396)
T ss_dssp HHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCHH----HHHH-TSEEECTT--CHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcchH----HHHc-CceEEcCC--CHHHHHHHHHHHHcC-
Confidence 458888888 999988 666899999999999855555432 3454 88766554 789999999999998
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 012151 431 EGQEMRARIMHLKEKVDFCLRKGGSSHQSLERLIDHILS 469 (470)
Q Consensus 431 ~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 469 (470)
+..+++ |++..+. -+...+.+++++.|++
T Consensus 368 --~~~~~~---m~~~~~~-----~~~~~aa~ri~~~l~~ 396 (396)
T 3dzc_A 368 --PQAYQA---MSQAHNP-----YGDGKACQRIADILAK 396 (396)
T ss_dssp --HHHHHH---HHTSCCT-----TCCSCHHHHHHHHHHC
T ss_pred --HHHHHH---HhhccCC-----CcCChHHHHHHHHHhC
Confidence 555443 3332222 2334455666666543
No 34
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.23 E-value=2.1e-10 Score=113.32 Aligned_cols=160 Identities=9% Similarity=0.092 Sum_probs=95.8
Q ss_pred CCCeEEEEEcCcccccCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCCCCcccCCCchhHHHHh--cCCceeeeccCh
Q 012151 281 TPKSVVYISFGSVIAINKDGFLEIAWGVANS-----RMPFLWVVRPGLVSGAEWVEPLPKGFLEML--DGRGCIVKWAPQ 353 (470)
Q Consensus 281 ~~~~~I~vs~Gs~~~~~~~~~~~i~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~--~~~~~~~~~~p~ 353 (470)
+++++++++.|...... +.+..+++|+..+ +.++++..+.+. .+.+.+.+.. .+++.+.+++++
T Consensus 222 ~~~~~vlv~~~r~~~~~-~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~--------~~~~~l~~~~~~~~~v~l~~~l~~ 292 (403)
T 3ot5_A 222 GDNRLILMTAHRRENLG-EPMQGMFEAVREIVESREDTELVYPMHLNP--------AVREKAMAILGGHERIHLIEPLDA 292 (403)
T ss_dssp TTCEEEEECCCCHHHHT-THHHHHHHHHHHHHHHCTTEEEEEECCSCH--------HHHHHHHHHHTTCTTEEEECCCCH
T ss_pred cCCCEEEEEeCcccccC-cHHHHHHHHHHHHHHhCCCceEEEecCCCH--------HHHHHHHHHhCCCCCEEEeCCCCH
Confidence 34567878766432211 1245566665542 345555443220 0112222212 257888888864
Q ss_pred ---HhhhccCCcceeecccCchhhHHhhhcCCceecCCCccchhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhccc
Q 012151 354 ---QEVLAHPAVGGFWTHSGWNSTLESMCEGVPMICQPYLPDQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVEA 430 (470)
Q Consensus 354 ---~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 430 (470)
..+++.+++ +|+-+|. .+.||+++|+|+|++|-..+++. +.+. |.|+.+.. ++++|.+++.++++|
T Consensus 293 ~~~~~l~~~ad~--vv~~SGg-~~~EA~a~g~PvV~~~~~~~~~e----~v~~-g~~~lv~~--d~~~l~~ai~~ll~~- 361 (403)
T 3ot5_A 293 IDFHNFLRKSYL--VFTDSGG-VQEEAPGMGVPVLVLRDTTERPE----GIEA-GTLKLIGT--NKENLIKEALDLLDN- 361 (403)
T ss_dssp HHHHHHHHHEEE--EEECCHH-HHHHGGGTTCCEEECCSSCSCHH----HHHH-TSEEECCS--CHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHhcCE--EEECCcc-HHHHHHHhCCCEEEecCCCcchh----heeC-CcEEEcCC--CHHHHHHHHHHHHcC-
Confidence 347878887 9988753 33799999999999976666654 2464 98877764 889999999999998
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 012151 431 EGQEMRARIMHLKEKVDFCLRKGGSSHQSLERLIDH 466 (470)
Q Consensus 431 ~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~ 466 (470)
+..+++.. +..+ ....++++.+.++.|.+.
T Consensus 362 --~~~~~~m~---~~~~-~~g~~~aa~rI~~~l~~~ 391 (403)
T 3ot5_A 362 --KESHDKMA---QAAN-PYGDGFAANRILAAIKSH 391 (403)
T ss_dssp --HHHHHHHH---HSCC-TTCCSCHHHHHHHHHHHH
T ss_pred --HHHHHHHH---hhcC-cccCCcHHHHHHHHHHHH
Confidence 65554433 2222 223335555555555443
No 35
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.20 E-value=2.2e-08 Score=97.55 Aligned_cols=131 Identities=15% Similarity=0.224 Sum_probs=88.3
Q ss_pred CeEEEEEcCcccccCHHHHHHHHHHHHhCCC----C-EEEEEcCCCCCCCcccCCCchhHHHHh--cCCceeeeccCh-H
Q 012151 283 KSVVYISFGSVIAINKDGFLEIAWGVANSRM----P-FLWVVRPGLVSGAEWVEPLPKGFLEML--DGRGCIVKWAPQ-Q 354 (470)
Q Consensus 283 ~~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~----~-~i~~~~~~~~~~~~~~~~~p~~~~~~~--~~~~~~~~~~p~-~ 354 (470)
+..+++..|+.. ..+....+++|++.... . -++.++.+. .+.+ ....++. .+++.+.++... .
T Consensus 195 ~~~~i~~~G~~~--~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~------~~~~-~~~~~~~~~~~~v~~~g~~~~~~ 265 (374)
T 2iw1_A 195 QQNLLLQVGSDF--GRKGVDRSIEALASLPESLRHNTLLFVVGQDK------PRKF-EALAEKLGVRSNVHFFSGRNDVS 265 (374)
T ss_dssp TCEEEEEECSCT--TTTTHHHHHHHHHTSCHHHHHTEEEEEESSSC------CHHH-HHHHHHHTCGGGEEEESCCSCHH
T ss_pred CCeEEEEeccch--hhcCHHHHHHHHHHhHhccCCceEEEEEcCCC------HHHH-HHHHHHcCCCCcEEECCCcccHH
Confidence 346667778775 34556777888887632 2 233443321 0001 1111222 367788887553 4
Q ss_pred hhhccCCcceeec----ccCchhhHHhhhcCCceecCCCccchhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhcc
Q 012151 355 EVLAHPAVGGFWT----HSGWNSTLESMCEGVPMICQPYLPDQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVE 429 (470)
Q Consensus 355 ~lL~~~~~~~~I~----HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~ 429 (470)
.++..+++ +|. -|..+++.||+++|+|+|+.+. ..+...+++. +.|..++..-+.++++++|.++++|
T Consensus 266 ~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~~~~~~~l~~~i~~l~~~ 337 (374)
T 2iw1_A 266 ELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIAEPFSQEQLNEVLRKALTQ 337 (374)
T ss_dssp HHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEECSSCCHHHHHHHHHHHHHC
T ss_pred HHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeCCCCCHHHHHHHHHHHHcC
Confidence 58888888 775 4667899999999999999654 4566788884 8999887326889999999999998
No 36
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.19 E-value=1.4e-09 Score=106.24 Aligned_cols=162 Identities=12% Similarity=0.114 Sum_probs=95.6
Q ss_pred CCeEEEEEcCcccccCHHHHHHHHHHHHhC---CCCEEEEEcCCCCCCCcccCCCchhHHHHhc--CCceeeeccChH--
Q 012151 282 PKSVVYISFGSVIAINKDGFLEIAWGVANS---RMPFLWVVRPGLVSGAEWVEPLPKGFLEMLD--GRGCIVKWAPQQ-- 354 (470)
Q Consensus 282 ~~~~I~vs~Gs~~~~~~~~~~~i~~al~~~---~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~--~~~~~~~~~p~~-- 354 (470)
++++++++.|...... +.+..+++|++.+ ..++.++++.+. . ..+.+.+.+... +++.+.+++++.
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~~~g~--~----~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 276 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVYPVHM--N----PVVRETANDILGDYGRIHLIEPLDVIDF 276 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEEECCS--C----HHHHHHHHHHHTTCTTEEEECCCCHHHH
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEEeCCC--C----HHHHHHHHHHhhccCCEEEeCCCCHHHH
Confidence 4567777888764211 3456677777653 112323332221 0 001122222223 678887777654
Q ss_pred -hhhccCCcceeecccCchhhHHhhhcCCceecCCCccchhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhccchhH
Q 012151 355 -EVLAHPAVGGFWTHSGWNSTLESMCEGVPMICQPYLPDQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVEAEGQ 433 (470)
Q Consensus 355 -~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~ 433 (470)
.+|..+++ +|+.+| +++.||+++|+|+|+.......+ .+.+. |.|..++. ++++|+++|.++++| +
T Consensus 277 ~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~----e~v~~-g~g~~v~~--d~~~la~~i~~ll~~---~ 343 (375)
T 3beo_A 277 HNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERP----EGIEA-GTLKLAGT--DEETIFSLADELLSD---K 343 (375)
T ss_dssp HHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCH----HHHHT-TSEEECCS--CHHHHHHHHHHHHHC---H
T ss_pred HHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCc----eeecC-CceEEcCC--CHHHHHHHHHHHHhC---h
Confidence 47878888 998874 56889999999999985433332 23454 88887764 889999999999998 5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 012151 434 EMRARIMHLKEKVDFCLRKGGSSHQSLERLIDHI 467 (470)
Q Consensus 434 ~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~l 467 (470)
+.+++ |++..++. .+..+..+.++.+.+.+
T Consensus 344 ~~~~~---~~~~~~~~-~~~~~~~~i~~~~~~~~ 373 (375)
T 3beo_A 344 EAHDK---MSKASNPY-GDGRASERIVEAILKHF 373 (375)
T ss_dssp HHHHH---HCCCCCTT-CCSCHHHHHHHHHHHHT
T ss_pred HhHhh---hhhcCCCC-CCCcHHHHHHHHHHHHh
Confidence 54433 33322222 12244445555555444
No 37
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.15 E-value=1.8e-09 Score=104.24 Aligned_cols=125 Identities=16% Similarity=0.132 Sum_probs=84.5
Q ss_pred EEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChH---hhhccCCc
Q 012151 286 VYISFGSVIAINKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQ---EVLAHPAV 362 (470)
Q Consensus 286 I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~---~lL~~~~~ 362 (470)
+++..|+.. ..+.+..+++|++..+.+++++ +.+. . .+ .-+.+.++.++++.+.+|+++. .++..+++
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~-G~g~--~---~~-~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv 234 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLA-GPAW--E---PE-YFDEITRRYGSTVEPIGEVGGERRLDLLASAHA 234 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEE-SCCC--C---HH-HHHHHHHHHTTTEEECCCCCHHHHHHHHHHCSE
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEE-eCcc--c---HH-HHHHHHHHhCCCEEEeccCCHHHHHHHHHhCCE
Confidence 344567775 3455777888888877776554 3221 0 00 1122334445888999999976 58888888
Q ss_pred ceeec--c------------cCchhhHHhhhcCCceecCCCccchhhhHHHHHh--hhheeEEcCCcccHHHHHHHHHHH
Q 012151 363 GGFWT--H------------SGWNSTLESMCEGVPMICQPYLPDQMVNARYVSH--FWRVGLHSEWKLERMEIERAIRRV 426 (470)
Q Consensus 363 ~~~I~--H------------GG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~--~~G~G~~l~~~~~~~~l~~ai~~v 426 (470)
+|. . |-..++.||+++|+|+|+... ..+...+++ . +.|..++. +.++++++|.++
T Consensus 235 --~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~~~--d~~~l~~~i~~l 305 (342)
T 2iuy_A 235 --VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGTDF--APDEARRTLAGL 305 (342)
T ss_dssp --EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSSCC--CHHHHHHHHHTS
T ss_pred --EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEcCC--CHHHHHHHHHHH
Confidence 663 2 334689999999999999665 445666665 4 56665555 899999999999
Q ss_pred hc
Q 012151 427 MV 428 (470)
Q Consensus 427 l~ 428 (470)
++
T Consensus 306 ~~ 307 (342)
T 2iuy_A 306 PA 307 (342)
T ss_dssp CC
T ss_pred HH
Confidence 87
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.00 E-value=2.5e-07 Score=91.54 Aligned_cols=110 Identities=15% Similarity=0.064 Sum_probs=76.4
Q ss_pred CCceeeeccC---h---HhhhccCCcceeeccc----CchhhHHhhhcCCceecCCCccchhhhHHHHHhhhheeEEcCC
Q 012151 343 GRGCIVKWAP---Q---QEVLAHPAVGGFWTHS----GWNSTLESMCEGVPMICQPYLPDQMVNARYVSHFWRVGLHSEW 412 (470)
Q Consensus 343 ~~~~~~~~~p---~---~~lL~~~~~~~~I~HG----G~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~ 412 (470)
+++.+.+|++ + ..++..+++ +|.-+ ...++.||+++|+|+|+.+. ..+...+.+. +.|..++
T Consensus 293 ~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~- 364 (416)
T 2x6q_A 293 YDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR- 364 (416)
T ss_dssp TTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES-
T ss_pred CcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC-
Confidence 6788888775 2 347777887 77654 46689999999999999654 4566667673 7788776
Q ss_pred cccHHHHHHHHHHHhccchhHHHHHHH-HHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 012151 413 KLERMEIERAIRRVMVEAEGQEMRARI-MHLKEKVDFCLRKGGSSHQSLERLIDHILS 469 (470)
Q Consensus 413 ~~~~~~l~~ai~~vl~~~~~~~~~~~a-~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 469 (470)
+.++++++|.++++| +..+++. ++..+.+++. -+....++++++.+++
T Consensus 365 --d~~~la~~i~~ll~~---~~~~~~~~~~a~~~~~~~----fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 365 --DANEAVEVVLYLLKH---PEVSKEMGAKAKERVRKN----FIITKHMERYLDILNS 413 (416)
T ss_dssp --SHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHH----TBHHHHHHHHHHHHHT
T ss_pred --CHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHH----cCHHHHHHHHHHHHHH
Confidence 789999999999998 5443322 2222233322 5566777777776665
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.88 E-value=8.6e-09 Score=100.94 Aligned_cols=313 Identities=13% Similarity=0.068 Sum_probs=164.7
Q ss_pred EEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCc-ccccccCCCCCeeEEecCC-CCCCCcccccCHHHHHHHHH
Q 012151 18 VILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFS-STNYFSCNYPHFDFHSFPD-GFSETEASVEDVAVFFTAIN 95 (470)
Q Consensus 18 il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~-~~~~~~~~~~gi~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 95 (470)
+++ -.+++-.+.-+.+|.++|.++ +++.++.+..-.. ...... ..++.+ +-|+ .+..+ ..+..+....
T Consensus 12 ~~~-v~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~--~~~~~i-~~~~~~l~~~---~~~~~~~~~~-- 81 (385)
T 4hwg_A 12 VMT-IVGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVF--FDDMGI-RKPDYFLEVA---ADNTAKSIGL-- 81 (385)
T ss_dssp EEE-EECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHH--HC-CCC-CCCSEECCCC---CCCSHHHHHH--
T ss_pred eeE-EEEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHH--HhhCCC-CCCceecCCC---CCCHHHHHHH--
Confidence 544 467788888888899999877 9988888764432 111100 022222 1111 11111 1122222222
Q ss_pred hhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeC--CCccchHHHHhhcCCCeEEEecccHHHHHHHHhchhhhhccCCC
Q 012151 96 GKCIMPFRDCLAEILMKSKADQNKDSSPCCLITD--AFWFFTHTVAADFKLPTIVLQTCGVSGFLAFTAYPILRERAYLP 173 (470)
Q Consensus 96 ~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D--~~~~~~~~vA~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p 173 (470)
....+.+.+++. +||+|++- ....++..+|.++|||++.+...
T Consensus 82 --~~~~l~~~l~~~------------kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eag--------------------- 126 (385)
T 4hwg_A 82 --VIEKVDEVLEKE------------KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAG--------------------- 126 (385)
T ss_dssp --HHHHHHHHHHHH------------CCSEEEEESCSGGGGGHHHHHHTTCCEEEESCC---------------------
T ss_pred --HHHHHHHHHHhc------------CCcEEEEECCchHHHHHHHHHHhCCCEEEEeCC---------------------
Confidence 223444556654 89999863 23344588999999997754211
Q ss_pred CCCCCCCcccCCCCCCCCccccCcccccCchhHHHHHHHHHhhhccccEEEEcChHHhhHHHHHHHhhccCC-CCeeeec
Q 012151 174 VQDHQSLETPVTEFPPLRVKDIQVLETMDQENVYRFVSAIDTQIMASSGVIWNSYRDLEQAGLGLAHQKYLS-IPIFPIG 252 (470)
Q Consensus 174 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~p~~~~~~~~~~~-~~v~~vG 252 (470)
. + .... .+| ....+...+ ..++.++.++-..-+.- . +...+ .++.++|
T Consensus 127 ------l-r------s~~~-~~p-------ee~nR~~~~-----~~a~~~~~~te~~~~~l----~-~~G~~~~~I~vtG 175 (385)
T 4hwg_A 127 ------N-R------CFDQ-RVP-------EEINRKIID-----HISDVNITLTEHARRYL----I-AEGLPAELTFKSG 175 (385)
T ss_dssp ------C-C------CSCT-TST-------HHHHHHHHH-----HHCSEEEESSHHHHHHH----H-HTTCCGGGEEECC
T ss_pred ------C-c------cccc-cCc-------HHHHHHHHH-----hhhceeecCCHHHHHHH----H-HcCCCcCcEEEEC
Confidence 0 0 0000 000 011111111 22455666665433321 1 22222 3488888
Q ss_pred cCCCCCCCCCCCCCccchhhhhhhcCCCCCCeEEEEEcCccccc-CHHHHHHHHHHHHhC----CCCEEEEEcCCCCCCC
Q 012151 253 PLHKCSPASSGSLSSQDYQRSISWLDKQTPKSVVYISFGSVIAI-NKDGFLEIAWGVANS----RMPFLWVVRPGLVSGA 327 (470)
Q Consensus 253 pl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~I~vs~Gs~~~~-~~~~~~~i~~al~~~----~~~~i~~~~~~~~~~~ 327 (470)
-...+.-....... .. +++.+-+.- ++++.|+++.|..... ..+.+..+++|+..+ +..+|+...+.
T Consensus 176 np~~D~~~~~~~~~-~~-~~~~~~lgl-~~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~----- 247 (385)
T 4hwg_A 176 SHMPEVLDRFMPKI-LK-SDILDKLSL-TPKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR----- 247 (385)
T ss_dssp CSHHHHHHHHHHHH-HH-CCHHHHTTC-CTTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH-----
T ss_pred CchHHHHHHhhhhc-ch-hHHHHHcCC-CcCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH-----
Confidence 54322000000000 00 113333332 2356888888775432 234566777777654 45666654211
Q ss_pred cccCCCchhHHHH---h--cCCceeeeccCh---HhhhccCCcceeecccCchhhHHhhhcCCceecCCCccchhhhHHH
Q 012151 328 EWVEPLPKGFLEM---L--DGRGCIVKWAPQ---QEVLAHPAVGGFWTHSGWNSTLESMCEGVPMICQPYLPDQMVNARY 399 (470)
Q Consensus 328 ~~~~~~p~~~~~~---~--~~~~~~~~~~p~---~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~r 399 (470)
+.+.+.+. . .+++.+.+.+++ ..+++++++ +|+-+|. .+.||.+.|+|+|+++...+.+.
T Consensus 248 -----~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e---- 315 (385)
T 4hwg_A 248 -----TKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE---- 315 (385)
T ss_dssp -----HHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH----
T ss_pred -----HHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh----
Confidence 11111111 1 246677665554 468888888 9999885 46999999999999987655332
Q ss_pred HHhhhheeEEcCCcccHHHHHHHHHHHhcc
Q 012151 400 VSHFWRVGLHSEWKLERMEIERAIRRVMVE 429 (470)
Q Consensus 400 v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~ 429 (470)
..++ |.++.+.. ++++|.+++.++++|
T Consensus 316 ~v~~-G~~~lv~~--d~~~i~~ai~~ll~d 342 (385)
T 4hwg_A 316 GMDA-GTLIMSGF--KAERVLQAVKTITEE 342 (385)
T ss_dssp HHHH-TCCEECCS--SHHHHHHHHHHHHTT
T ss_pred hhhc-CceEEcCC--CHHHHHHHHHHHHhC
Confidence 2453 87766654 789999999999987
No 40
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.82 E-value=6.9e-07 Score=88.26 Aligned_cols=166 Identities=13% Similarity=0.079 Sum_probs=94.5
Q ss_pred CeEEEEEcCcccccCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCCCCcccCCCchhHHH---H--hcCC-------c
Q 012151 283 KSVVYISFGSVIAINKDGFLEIAWGVANS-----RMPFLWVVRPGLVSGAEWVEPLPKGFLE---M--LDGR-------G 345 (470)
Q Consensus 283 ~~~I~vs~Gs~~~~~~~~~~~i~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~p~~~~~---~--~~~~-------~ 345 (470)
+..+++..|.... .+.+..+++|++.+ +.+++++-.+...... .+.+.+.+ + ..++ +
T Consensus 183 ~~~~il~vGr~~~--~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~----~l~~~~~~~~~~~~l~~~v~~l~~vv 256 (413)
T 3oy2_A 183 DDVLFLNMNRNTA--RKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKF----DLHSIALRELVASGVDNVFTHLNKIM 256 (413)
T ss_dssp TSEEEECCSCSSG--GGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSC----CHHHHHHHHHHHHTCSCHHHHHTTEE
T ss_pred CceEEEEcCCCch--hcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchh----hHHHHHHHHHHHcCccccccccccee
Confidence 3567777888653 34455566665543 4566555433211110 01122211 1 2232 4
Q ss_pred eeeeccChHh---hhccCCcceeec----ccCchhhHHhhhcCCceecCCCccchhhhHHHHHhhhhe------------
Q 012151 346 CIVKWAPQQE---VLAHPAVGGFWT----HSGWNSTLESMCEGVPMICQPYLPDQMVNARYVSHFWRV------------ 406 (470)
Q Consensus 346 ~~~~~~p~~~---lL~~~~~~~~I~----HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~------------ 406 (470)
.+.+|+|+.+ +|..+++ +|. -|...++.||+++|+|+|+.. .......+.+. ..
T Consensus 257 ~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~----~~g~~e~v~~~-~~~~i~~~~~~~~~ 329 (413)
T 3oy2_A 257 INRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISA----VGGADDYFSGD-CVYKIKPSAWISVD 329 (413)
T ss_dssp EECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEEC----CHHHHHHSCTT-TSEEECCCEEEECT
T ss_pred eccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcC----CCChHHHHccC-cccccccccccccc
Confidence 5569998555 6777887 764 233558999999999999954 34444555442 22
Q ss_pred ---eE--EcCCcccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 012151 407 ---GL--HSEWKLERMEIERAIRRVMVEAEGQEMRARIMHLKEKVDFCLRKGGSSHQSLERLIDHILS 469 (470)
Q Consensus 407 ---G~--~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 469 (470)
|. .++. -+.++|+++| ++++| ++.++ ++++..++.+.+.-+..+.++++++.+++
T Consensus 330 ~~~G~~gl~~~-~d~~~la~~i-~l~~~---~~~~~---~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 389 (413)
T 3oy2_A 330 DRDGIGGIEGI-IDVDDLVEAF-TFFKD---EKNRK---EYGKRVQDFVKTKPTWDDISSDIIDFFNS 389 (413)
T ss_dssp TTCSSCCEEEE-CCHHHHHHHH-HHTTS---HHHHH---HHHHHHHHHHTTSCCHHHHHHHHHHHHHH
T ss_pred cccCcceeeCC-CCHHHHHHHH-HHhcC---HHHHH---HHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 55 4444 4899999999 99998 54433 33333333333335666666666665543
No 41
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.79 E-value=8.7e-07 Score=94.17 Aligned_cols=168 Identities=10% Similarity=0.026 Sum_probs=94.5
Q ss_pred eEEEEEcCcccccCHHHHHHHHHHHHhCC-----CCEEEEEcCCCCCCCcccC--CCchhHH---HHh--cCCceeeec-
Q 012151 284 SVVYISFGSVIAINKDGFLEIAWGVANSR-----MPFLWVVRPGLVSGAEWVE--PLPKGFL---EML--DGRGCIVKW- 350 (470)
Q Consensus 284 ~~I~vs~Gs~~~~~~~~~~~i~~al~~~~-----~~~i~~~~~~~~~~~~~~~--~~p~~~~---~~~--~~~~~~~~~- 350 (470)
..+++..|... +.+.+..+++|++.+. .++++ ++.+........+ ...+.+. ++. .+++.+.++
T Consensus 572 ~~vIl~vGRl~--~~KGid~LIeA~~~L~~~~~~v~LvI-vG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~ 648 (816)
T 3s28_A 572 KPILFTMARLD--RVKNLSGLVEWYGKNTRLRELANLVV-VGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQ 648 (816)
T ss_dssp SCEEEEECCCC--TTTTHHHHHHHHHHCHHHHHHCEEEE-ECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCC
T ss_pred CeEEEEEccCc--ccCCHHHHHHHHHHHHhhCCCeEEEE-EeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCc
Confidence 45667778875 4456777778877653 33433 3333210000000 0001111 122 266777774
Q ss_pred ---cChHhhhc----cCCcceeecc----cCchhhHHhhhcCCceecCCCccchhhhHHHHHhhhheeEEcCCcccHHHH
Q 012151 351 ---APQQEVLA----HPAVGGFWTH----SGWNSTLESMCEGVPMICQPYLPDQMVNARYVSHFWRVGLHSEWKLERMEI 419 (470)
Q Consensus 351 ---~p~~~lL~----~~~~~~~I~H----GG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l 419 (470)
+|+.++.. .+++ ||.- |-..++.||+++|+|+|+. |.......+.+. +.|..++. -+.+++
T Consensus 649 ~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gllv~p-~D~e~L 720 (816)
T 3s28_A 649 MDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFHIDP-YHGDQA 720 (816)
T ss_dssp CCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEEECT-TSHHHH
T ss_pred cccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEEeCC-CCHHHH
Confidence 44455544 4556 7743 3456999999999999994 555666777774 78888887 578999
Q ss_pred HHHHHHHh----ccchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 012151 420 ERAIRRVM----VEAEGQEMRARIMHLKEKVDFCLRKGGSSHQSLERLIDHIL 468 (470)
Q Consensus 420 ~~ai~~vl----~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 468 (470)
+++|.+++ +| +..++ ++++..++.+.+.-+-...++++++.++
T Consensus 721 A~aI~~lL~~Ll~d---~~~~~---~m~~~ar~~a~~~fSwe~~a~~ll~lY~ 767 (816)
T 3s28_A 721 ADTLADFFTKCKED---PSHWD---EISKGGLQRIEEKYTWQIYSQRLLTLTG 767 (816)
T ss_dssp HHHHHHHHHHHHHC---THHHH---HHHHHHHHHHHHSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccC---HHHHH---HHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99997776 66 33332 2233333322222555555666655443
No 42
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.59 E-value=1e-06 Score=89.08 Aligned_cols=159 Identities=13% Similarity=-0.002 Sum_probs=91.9
Q ss_pred EEEEEcCcccccCHHHHHHHHHHHHhC---CCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCce-eeeccChH---hhh
Q 012151 285 VVYISFGSVIAINKDGFLEIAWGVANS---RMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGC-IVKWAPQQ---EVL 357 (470)
Q Consensus 285 ~I~vs~Gs~~~~~~~~~~~i~~al~~~---~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~p~~---~lL 357 (470)
.+++..|.... .+.+..+++|++.+ +.+++++- .+.. ...+.+ ....++.++++. +.++ +.. .++
T Consensus 292 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~ivG-~g~~---~~~~~l-~~~~~~~~~~v~~~~g~-~~~~~~~~~ 363 (485)
T 1rzu_A 292 PLFCVISRLTW--QKGIDLMAEAVDEIVSLGGRLVVLG-AGDV---ALEGAL-LAAASRHHGRVGVAIGY-NEPLSHLMQ 363 (485)
T ss_dssp CEEEEESCBST--TTTHHHHHTTHHHHHHTTCEEEEEE-CBCH---HHHHHH-HHHHHHTTTTEEEEESC-CHHHHHHHH
T ss_pred eEEEEEccCcc--ccCHHHHHHHHHHHHhcCceEEEEe-CCch---HHHHHH-HHHHHhCCCcEEEecCC-CHHHHHHHH
Confidence 36677788763 34455556665543 45554443 2200 000001 122233346777 5677 543 478
Q ss_pred ccCCcceeecc----cCchhhHHhhhcCCceecCCCccchhhhHHHHHhhh---------heeEEcCCcccHHHHHHHHH
Q 012151 358 AHPAVGGFWTH----SGWNSTLESMCEGVPMICQPYLPDQMVNARYVSHFW---------RVGLHSEWKLERMEIERAIR 424 (470)
Q Consensus 358 ~~~~~~~~I~H----GG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~---------G~G~~l~~~~~~~~l~~ai~ 424 (470)
..+++ +|.- |-..++.||+++|+|+|+... ......+.+ - +.|..++. -+.++|+++|.
T Consensus 364 ~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~-~d~~~la~~i~ 435 (485)
T 1rzu_A 364 AGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVID-ANHAALASKAATGVQFSP-VTLDGLKQAIR 435 (485)
T ss_dssp HHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEESS-CSHHHHHHHHH
T ss_pred hcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecc-cccccccccCCcceEeCC-CCHHHHHHHHH
Confidence 88888 7743 345689999999999999654 344455554 2 47877776 57899999999
Q ss_pred HHh---ccchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 012151 425 RVM---VEAEGQEMRARIMHLKEKVDFCLRKGGSSHQSLERLIDHIL 468 (470)
Q Consensus 425 ~vl---~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 468 (470)
+++ +| +..+++ +++..++ +.-+....++++++.++
T Consensus 436 ~ll~~~~~---~~~~~~---~~~~~~~---~~fs~~~~~~~~~~~y~ 473 (485)
T 1rzu_A 436 RTVRYYHD---PKLWTQ---MQKLGMK---SDVSWEKSAGLYAALYS 473 (485)
T ss_dssp HHHHHHTC---HHHHHH---HHHHHHT---CCCBHHHHHHHHHHHHH
T ss_pred HHHHHhCC---HHHHHH---HHHHHHH---HhCChHHHHHHHHHHHH
Confidence 999 67 443332 2222221 22445555555555544
No 43
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.59 E-value=1.9e-05 Score=81.41 Aligned_cols=115 Identities=10% Similarity=0.055 Sum_probs=75.0
Q ss_pred CCceeeeccChHh---hhccCCcceeec---ccCchhhHHhhhcCCceecCCCccchhhh-HHHHHhhhheeEEcCCccc
Q 012151 343 GRGCIVKWAPQQE---VLAHPAVGGFWT---HSGWNSTLESMCEGVPMICQPYLPDQMVN-ARYVSHFWRVGLHSEWKLE 415 (470)
Q Consensus 343 ~~~~~~~~~p~~~---lL~~~~~~~~I~---HGG~gs~~eal~~GvP~v~~P~~~DQ~~n-a~rv~~~~G~G~~l~~~~~ 415 (470)
+++.+.+++|+.+ ++..+++ ||. .|+..++.||+++|+|+|+.|-..=.... +..+.. .|+...+.. +
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~-~g~~e~v~~--~ 508 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH-LGLDEMNVA--D 508 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH-HTCGGGBCS--S
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH-CCChhhhcC--C
Confidence 5678899998554 6777887 762 26677999999999999997743211122 345556 477655544 8
Q ss_pred HHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHH--hcCCChHHHHHHHHHHHH
Q 012151 416 RMEIERAIRRVMVEAEGQEMRARIMHLKEKVDFCL--RKGGSSHQSLERLIDHIL 468 (470)
Q Consensus 416 ~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~--~~~~~~~~~~~~~~~~l~ 468 (470)
.+++++++.++++| +..++ +|++..++.+ .+.-+....++.+++.++
T Consensus 509 ~~~la~~i~~l~~~---~~~~~---~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~ 557 (568)
T 2vsy_A 509 DAAFVAKAVALASD---PAALT---ALHARVDVLRRASGVFHMDGFADDFGALLQ 557 (568)
T ss_dssp HHHHHHHHHHHHHC---HHHHH---HHHHHHHHHHHHSSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC---HHHHH---HHHHHHHHhhhcCCCCCHHHHHHHHHHHHH
Confidence 89999999999998 55443 3333333333 233455555565555544
No 44
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.57 E-value=1.3e-07 Score=81.90 Aligned_cols=139 Identities=9% Similarity=0.009 Sum_probs=92.3
Q ss_pred EEEEEcCcccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCcccCCCchhH---HHHhcCCceeeeccCh---Hhhh
Q 012151 285 VVYISFGSVIAINKDGFLEIAWGVANS-RMPFLWVVRPGLVSGAEWVEPLPKGF---LEMLDGRGCIVKWAPQ---QEVL 357 (470)
Q Consensus 285 ~I~vs~Gs~~~~~~~~~~~i~~al~~~-~~~~i~~~~~~~~~~~~~~~~~p~~~---~~~~~~~~~~~~~~p~---~~lL 357 (470)
.+++..|+.. ..+.+..+++|++.. +.+++++ +.+... +.+..-+ ....++++.+.+|+++ ..++
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~-G~~~~~-----~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~ 95 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIV-GWFSKG-----DHAERYARKIMKIAPDNVKFLGSVSEEELIDLY 95 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEE-BCCCTT-----STHHHHHHHHHHHSCTTEEEEESCCHHHHHHHH
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEE-ecCccH-----HHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHH
Confidence 3455678775 345677788888887 4555554 332110 1121111 1233468899999997 4588
Q ss_pred ccCCcceeec---ccC-chhhHHhhhcCCceecCCCccchhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhccchhH
Q 012151 358 AHPAVGGFWT---HSG-WNSTLESMCEGVPMICQPYLPDQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVEAEGQ 433 (470)
Q Consensus 358 ~~~~~~~~I~---HGG-~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~ 433 (470)
..+++ +|. +.| ..++.||+++|+|+|+.. ...+...+++. +.|..+ . -+.++++++|.++++| +
T Consensus 96 ~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~----~~~~~e~i~~~-~~g~~~-~-~d~~~l~~~i~~l~~~---~ 163 (177)
T 2f9f_A 96 SRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVN----EGGFKETVINE-KTGYLV-N-ADVNEIIDAMKKVSKN---P 163 (177)
T ss_dssp HHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEES----SHHHHHHCCBT-TTEEEE-C-SCHHHHHHHHHHHHHC---T
T ss_pred HhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeC----CCCHHHHhcCC-CccEEe-C-CCHHHHHHHHHHHHhC---H
Confidence 88888 775 334 449999999999999954 45666677773 788888 4 6889999999999988 4
Q ss_pred HH-HHHHHHHH
Q 012151 434 EM-RARIMHLK 443 (470)
Q Consensus 434 ~~-~~~a~~l~ 443 (470)
.. ++++++.+
T Consensus 164 ~~~~~~~~~~a 174 (177)
T 2f9f_A 164 DKFKKDCFRRA 174 (177)
T ss_dssp TTTHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 43 44444433
No 45
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.53 E-value=4.9e-06 Score=84.01 Aligned_cols=160 Identities=11% Similarity=0.008 Sum_probs=91.7
Q ss_pred eEEEEEcCcccccCHHHHHHHHHHHHhC---CCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCce-eeeccChH---hh
Q 012151 284 SVVYISFGSVIAINKDGFLEIAWGVANS---RMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGC-IVKWAPQQ---EV 356 (470)
Q Consensus 284 ~~I~vs~Gs~~~~~~~~~~~i~~al~~~---~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~p~~---~l 356 (470)
..+++..|.... .+.+..+++|++.+ +.+++++-.+.. ...+.+ ....++.++++. +.++ +.. .+
T Consensus 292 ~~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~ivG~g~~----~~~~~l-~~~~~~~~~~v~~~~g~-~~~~~~~~ 363 (485)
T 2qzs_A 292 VPLFAVVSRLTS--QKGLDLVLEALPGLLEQGGQLALLGAGDP----VLQEGF-LAAAAEYPGQVGVQIGY-HEAFSHRI 363 (485)
T ss_dssp SCEEEEEEEESG--GGCHHHHHHHHHHHHHTTCEEEEEEEECH----HHHHHH-HHHHHHSTTTEEEEESC-CHHHHHHH
T ss_pred CeEEEEeccCcc--ccCHHHHHHHHHHHhhCCcEEEEEeCCch----HHHHHH-HHHHHhCCCcEEEeCCC-CHHHHHHH
Confidence 355566677653 34455566666554 455544432210 000001 122233346776 5677 443 47
Q ss_pred hccCCcceeecc----cCchhhHHhhhcCCceecCCCccchhhhHHHHHhhh---------heeEEcCCcccHHHHHHHH
Q 012151 357 LAHPAVGGFWTH----SGWNSTLESMCEGVPMICQPYLPDQMVNARYVSHFW---------RVGLHSEWKLERMEIERAI 423 (470)
Q Consensus 357 L~~~~~~~~I~H----GG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~---------G~G~~l~~~~~~~~l~~ai 423 (470)
|..+++ +|.- |...++.||+++|+|+|+... ......+.+ - +.|..++. -+.++|+++|
T Consensus 364 ~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~-~d~~~la~~i 435 (485)
T 2qzs_A 364 MGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSD-CSLENLADGVASGFVFED-SNAWSLLRAI 435 (485)
T ss_dssp HHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEECS-SSHHHHHHHH
T ss_pred HHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceecc-CccccccccccceEEECC-CCHHHHHHHH
Confidence 888888 7743 335688999999999999644 344455554 2 47877776 5789999999
Q ss_pred HHHh---ccchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 012151 424 RRVM---VEAEGQEMRARIMHLKEKVDFCLRKGGSSHQSLERLIDHIL 468 (470)
Q Consensus 424 ~~vl---~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 468 (470)
.+++ +| +..+++ +++..++ +.-+....++++++.++
T Consensus 436 ~~ll~~~~~---~~~~~~---~~~~~~~---~~fs~~~~~~~~~~ly~ 474 (485)
T 2qzs_A 436 RRAFVLWSR---PSLWRF---VQRQAMA---MDFSWQVAAKSYRELYY 474 (485)
T ss_dssp HHHHHHHTS---HHHHHH---HHHHHHH---CCCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCC---HHHHHH---HHHHHHh---hcCCHHHHHHHHHHHHH
Confidence 9999 66 444333 2222221 22455555666665554
No 46
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.33 E-value=6.3e-05 Score=74.09 Aligned_cols=73 Identities=11% Similarity=-0.025 Sum_probs=56.6
Q ss_pred CCceeeeccChHh---hhccCCcceeec---ccC-chhhHHhh-------hcCCceecCCCccchhhhHHHHHhhhheeE
Q 012151 343 GRGCIVKWAPQQE---VLAHPAVGGFWT---HSG-WNSTLESM-------CEGVPMICQPYLPDQMVNARYVSHFWRVGL 408 (470)
Q Consensus 343 ~~~~~~~~~p~~~---lL~~~~~~~~I~---HGG-~gs~~eal-------~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~ 408 (470)
+++.+.+++|+.+ ++..+++ +|. +.| .+++.||+ ++|+|+|+... +... ..|.
T Consensus 265 ~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G~ 331 (406)
T 2hy7_A 265 DNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKSR 331 (406)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSSE
T ss_pred CCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cceE
Confidence 5668999998765 6777887 664 233 45789999 99999999654 5553 5687
Q ss_pred E-cCCcccHHHHHHHHHHHhcc
Q 012151 409 H-SEWKLERMEIERAIRRVMVE 429 (470)
Q Consensus 409 ~-l~~~~~~~~l~~ai~~vl~~ 429 (470)
. ++. -+.++|+++|.++++|
T Consensus 332 l~v~~-~d~~~la~ai~~ll~~ 352 (406)
T 2hy7_A 332 FGYTP-GNADSVIAAITQALEA 352 (406)
T ss_dssp EEECT-TCHHHHHHHHHHHHHC
T ss_pred EEeCC-CCHHHHHHHHHHHHhC
Confidence 7 666 5789999999999987
No 47
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.21 E-value=0.00026 Score=68.77 Aligned_cols=96 Identities=15% Similarity=0.202 Sum_probs=68.2
Q ss_pred ceeeeccC-hHhhhccCCcceeecc-----cCchhhHHhhhcCCceecCCCccchhhhHHHHHhhhheeEEcCCcccHHH
Q 012151 345 GCIVKWAP-QQEVLAHPAVGGFWTH-----SGWNSTLESMCEGVPMICQPYLPDQMVNARYVSHFWRVGLHSEWKLERME 418 (470)
Q Consensus 345 ~~~~~~~p-~~~lL~~~~~~~~I~H-----GG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~ 418 (470)
+.+.++.. -..+++.+++ ++.- +|..++.||+++|+|+|+-|...+..+....+.+. |.++... ++++
T Consensus 262 v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~~---d~~~ 335 (374)
T 2xci_A 262 VILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEVK---NETE 335 (374)
T ss_dssp EEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEECC---SHHH
T ss_pred EEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEeC---CHHH
Confidence 44445433 3458877776 6542 24478999999999999877777777777666664 8776652 6789
Q ss_pred HHHHHHHHhccch-hHHHHHHHHHHHHHHH
Q 012151 419 IERAIRRVMVEAE-GQEMRARIMHLKEKVD 447 (470)
Q Consensus 419 l~~ai~~vl~~~~-~~~~~~~a~~l~~~~~ 447 (470)
|+++|.++++| + -..+.+++++..+.-.
T Consensus 336 La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 336 LVTKLTELLSV-KKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp HHHHHHHHHHS-CCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhH-HHHHHHHHHHHHHHHhcc
Confidence 99999999987 4 2567777777665543
No 48
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.82 E-value=0.0004 Score=73.43 Aligned_cols=171 Identities=16% Similarity=0.140 Sum_probs=106.9
Q ss_pred CCCeEEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHh------cCCceeeeccChH
Q 012151 281 TPKSVVYISFGSVIAINKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEML------DGRGCIVKWAPQQ 354 (470)
Q Consensus 281 ~~~~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~------~~~~~~~~~~p~~ 354 (470)
+.+.+||.||.......++.+..-++-|++.+.-++|....+.. ...++.+.. ++++.+.+..|..
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~--------~~~~l~~~~~~~gi~~~r~~f~~~~~~~ 591 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAV--------GEPNIQQYAQNMGLPQNRIIFSPVAPKE 591 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGG--------GHHHHHHHHHHTTCCGGGEEEEECCCHH
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHH--------HHHHHHHHHHhcCCCcCeEEECCCCCHH
Confidence 55679999999999999999999999999998888888754321 112222221 2567778888866
Q ss_pred hhh---ccCCcceeec---ccCchhhHHhhhcCCceecCCCcc-chhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHh
Q 012151 355 EVL---AHPAVGGFWT---HSGWNSTLESMCEGVPMICQPYLP-DQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVM 427 (470)
Q Consensus 355 ~lL---~~~~~~~~I~---HGG~gs~~eal~~GvP~v~~P~~~-DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl 427 (470)
+-| ...++ ++. .+|.+|+.|||+.|||+|.++-.. =-..-+..+.. +|+...+-. |.++-.+.--++-
T Consensus 592 ~~l~~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~-~gl~e~ia~--~~~~Y~~~a~~la 666 (723)
T 4gyw_A 592 EHVRRGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTC-LGCLELIAK--NRQEYEDIAVKLG 666 (723)
T ss_dssp HHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHH-HTCGGGBCS--SHHHHHHHHHHHH
T ss_pred HHHHHhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHH-cCCcccccC--CHHHHHHHHHHHh
Confidence 644 44555 765 889999999999999999999432 22333455666 577654443 4444444444666
Q ss_pred ccchhHHHHHHHH-HHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 012151 428 VEAEGQEMRARIM-HLKEKVDFCLRKGGSSHQSLERLIDHILS 469 (470)
Q Consensus 428 ~~~~~~~~~~~a~-~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 469 (470)
+| +...++.+ +|++.+..+ +--...+.+..+++.+++
T Consensus 667 ~d---~~~l~~lr~~l~~~~~~s--~l~d~~~~~~~le~a~~~ 704 (723)
T 4gyw_A 667 TD---LEYLKKVRGKVWKQRISS--PLFNTKQYTMELERLYLQ 704 (723)
T ss_dssp HC---HHHHHHHHHHHHHHHHHS--STTCHHHHHHHHHHHHHH
T ss_pred cC---HHHHHHHHHHHHHHHHhC--cCcCHHHHHHHHHHHHHH
Confidence 66 44333332 233333221 123445555555555543
No 49
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.78 E-value=9.4e-05 Score=62.61 Aligned_cols=126 Identities=16% Similarity=0.159 Sum_probs=77.1
Q ss_pred eEEEEEcCcccccCHHHHHHHHHHHHhCC--CCEEEEEcCCCCCCCcccCCCchh---HHHHhcCCceeeeccChHh---
Q 012151 284 SVVYISFGSVIAINKDGFLEIAWGVANSR--MPFLWVVRPGLVSGAEWVEPLPKG---FLEMLDGRGCIVKWAPQQE--- 355 (470)
Q Consensus 284 ~~I~vs~Gs~~~~~~~~~~~i~~al~~~~--~~~i~~~~~~~~~~~~~~~~~p~~---~~~~~~~~~~~~~~~p~~~--- 355 (470)
+++++..|+.. ..+.+..+++|++.+. .++-+.+-++. ...+. ..++.+.++.+ +|+|+.+
T Consensus 2 ~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~~~~l~i~G~g--------~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~ 70 (166)
T 3qhp_A 2 PFKIAMVGRYS--NEKNQSVLIKAVALSKYKQDIVLLLKGKG--------PDEKKIKLLAQKLGVKAEF-GFVNSNELLE 70 (166)
T ss_dssp CEEEEEESCCS--TTTTHHHHHHHHHTCTTGGGEEEEEECCS--------TTHHHHHHHHHHHTCEEEC-CCCCHHHHHH
T ss_pred ceEEEEEeccc--hhcCHHHHHHHHHHhccCCCeEEEEEeCC--------ccHHHHHHHHHHcCCeEEE-eecCHHHHHH
Confidence 46777888885 3456777888888763 23333332221 11222 22333346677 9998655
Q ss_pred hhccCCcceeec----ccCchhhHHhhhcCC-ceecCCCccchhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhcc
Q 012151 356 VLAHPAVGGFWT----HSGWNSTLESMCEGV-PMICQPYLPDQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVE 429 (470)
Q Consensus 356 lL~~~~~~~~I~----HGG~gs~~eal~~Gv-P~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~ 429 (470)
++..+++ +|. -|...++.||+++|+ |+|+....+ .....+.+. +. .+.. -+.++++++|.++++|
T Consensus 71 ~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~~~~-~~--~~~~-~~~~~l~~~i~~l~~~ 140 (166)
T 3qhp_A 71 ILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFALDE-RS--LFEP-NNAKDLSAKIDWWLEN 140 (166)
T ss_dssp HHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGCSSG-GG--EECT-TCHHHHHHHHHHHHHC
T ss_pred HHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhccCC-ce--EEcC-CCHHHHHHHHHHHHhC
Confidence 6777777 775 244569999999996 999933221 111222231 33 2333 4789999999999998
No 50
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.65 E-value=0.00065 Score=59.26 Aligned_cols=77 Identities=16% Similarity=0.081 Sum_probs=59.4
Q ss_pred Ccee-eeccChH---hhhccCCcceeeccc----CchhhHHhhhcCCceecCCCccchhhhHHHHHhhhheeEEcCCccc
Q 012151 344 RGCI-VKWAPQQ---EVLAHPAVGGFWTHS----GWNSTLESMCEGVPMICQPYLPDQMVNARYVSHFWRVGLHSEWKLE 415 (470)
Q Consensus 344 ~~~~-~~~~p~~---~lL~~~~~~~~I~HG----G~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~ 415 (470)
++.+ .+++++. .++..+++ +|.-. ...++.||+++|+|+|+... ......+ . -+.|..++. -+
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~-~~~g~~~~~-~~ 166 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-T-NETGILVKA-GD 166 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-C-TTTCEEECT-TC
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-C-CCceEEecC-CC
Confidence 7888 8999855 37777777 77433 25689999999999998643 4455555 5 377888776 57
Q ss_pred HHHHHHHHHHHhc-c
Q 012151 416 RMEIERAIRRVMV-E 429 (470)
Q Consensus 416 ~~~l~~ai~~vl~-~ 429 (470)
.++++++|.++++ |
T Consensus 167 ~~~l~~~i~~l~~~~ 181 (200)
T 2bfw_A 167 PGELANAILKALELS 181 (200)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhcC
Confidence 8999999999999 8
No 51
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.58 E-value=0.0007 Score=68.91 Aligned_cols=144 Identities=9% Similarity=0.049 Sum_probs=92.1
Q ss_pred CeEEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEE--cCCCCCCCcccCCCchh-HHHHhcCCceeeeccChHhh---
Q 012151 283 KSVVYISFGSVIAINKDGFLEIAWGVANSRMPFLWVV--RPGLVSGAEWVEPLPKG-FLEMLDGRGCIVKWAPQQEV--- 356 (470)
Q Consensus 283 ~~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~--~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~p~~~l--- 356 (470)
..++|.||+......++.+....+-+++.+..++|.. +.+. +. ...+-.. ...-..+++.+.+.+|..+.
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~--g~--~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~ 515 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSN--GI--THPYVERFIKSYLGDSATAHPHSPYHQYLRI 515 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC--GG--GHHHHHHHHHHHHGGGEEEECCCCHHHHHHH
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc--hh--hHHHHHHHHHcCCCccEEEcCCCCHHHHHHH
Confidence 3689999999988999999999999998887777643 3211 10 0001111 11122367778888887664
Q ss_pred hccCCcceeec---ccCchhhHHhhhcCCceecCCCccc-hhhhHHHHHhhhheeEE-cCCcccHHHHHHHHHHHhccch
Q 012151 357 LAHPAVGGFWT---HSGWNSTLESMCEGVPMICQPYLPD-QMVNARYVSHFWRVGLH-SEWKLERMEIERAIRRVMVEAE 431 (470)
Q Consensus 357 L~~~~~~~~I~---HGG~gs~~eal~~GvP~v~~P~~~D-Q~~na~rv~~~~G~G~~-l~~~~~~~~l~~ai~~vl~~~~ 431 (470)
+..+++ ++. .+|..|+.|||++|||+|+.+-..= -..-+..+.. .|+... +. -+.++..+...++.+|
T Consensus 516 y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LIA--~d~eeYv~~Av~La~D-- 588 (631)
T 3q3e_A 516 LHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLIA--NTVDEYVERAVRLAEN-- 588 (631)
T ss_dssp HHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGEE--SSHHHHHHHHHHHHHC--
T ss_pred HhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCcceec--CCHHHHHHHHHHHhCC--
Confidence 466766 653 3788999999999999999874321 1222233445 466542 22 3677777777788888
Q ss_pred hHHHHHH
Q 012151 432 GQEMRAR 438 (470)
Q Consensus 432 ~~~~~~~ 438 (470)
+..+++
T Consensus 589 -~~~l~~ 594 (631)
T 3q3e_A 589 -HQERLE 594 (631)
T ss_dssp -HHHHHH
T ss_pred -HHHHHH
Confidence 544433
No 52
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.29 E-value=0.00039 Score=66.37 Aligned_cols=111 Identities=13% Similarity=0.165 Sum_probs=80.7
Q ss_pred CceeeeccChHhh---hccCCcceeecccCc---------hhhHHhhhcCCceecCCCccchhhhHHHHHhhhheeEEcC
Q 012151 344 RGCIVKWAPQQEV---LAHPAVGGFWTHSGW---------NSTLESMCEGVPMICQPYLPDQMVNARYVSHFWRVGLHSE 411 (470)
Q Consensus 344 ~~~~~~~~p~~~l---L~~~~~~~~I~HGG~---------gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~ 411 (470)
|+.+.+|+|+.++ |..++..++.+-+.. +-+.|+|++|+|+|+. +...++..+++. |+|..++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~----~~~~~~~~v~~~-~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQ----EGIANQELIENN-GLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEE----TTCTTTHHHHHH-TCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEc----cChhHHHHHHhC-CeEEEeC
Confidence 6699999999885 444555445533332 3578999999999974 466788999996 9999987
Q ss_pred CcccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 012151 412 WKLERMEIERAIRRVMVEAEGQEMRARIMHLKEKVDFCLRKGGSSHQSLERLIDHI 467 (470)
Q Consensus 412 ~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~l 467 (470)
. .+++.+++.++..+ +...+++++++.+++++.. .-..+++.+.+..|
T Consensus 290 ~---~~e~~~~i~~l~~~-~~~~m~~na~~~a~~~~~~----~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 290 D---VEEAIMKVKNVNED-EYIELVKNVRSFNPILRKG----FFTRRLLTESVFQA 337 (339)
T ss_dssp S---HHHHHHHHHHCCHH-HHHHHHHHHHHHTHHHHTT----HHHHHHHHHHHHHH
T ss_pred C---HHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhhcc----HHHHHHHHHHHHHh
Confidence 4 57888888886543 3467888998888888764 55666666655543
No 53
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.17 E-value=0.016 Score=55.53 Aligned_cols=104 Identities=13% Similarity=0.030 Sum_probs=73.9
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCCcccccccCCCCCee-EEecCCCCCCCcccccCHHHHH
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSK--GFSVTIIHTDFNFSSTNYFSCNYPHFD-FHSFPDGFSETEASVEDVAVFF 91 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~V~~~~~~~~~~~~~~~~~~~~gi~-~~~~~~~~~~~~~~~~~~~~~~ 91 (470)
.++|+++-..+.|++.-+.++.+.|+++ +.+|++++.+.+.+..+ ..++++ ++.++.. .....+
T Consensus 8 ~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~----~~p~vd~vi~~~~~---------~~~~~~ 74 (349)
T 3tov_A 8 YKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVME----YNPNIDELIVVDKK---------GRHNSI 74 (349)
T ss_dssp TCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTS----SCTTCSEEEEECCS---------SHHHHH
T ss_pred CCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHh----cCCCccEEEEeCcc---------cccccH
Confidence 4689999999999999999999999987 89999999988877776 446665 5555421 111111
Q ss_pred HHHHhhcchHHHHHHHHHHhcccCCCCCCCCC-cEEEeCCCccchHHHHhhcCCCeEE
Q 012151 92 TAINGKCIMPFRDCLAEILMKSKADQNKDSSP-CCLITDAFWFFTHTVAADFKLPTIV 148 (470)
Q Consensus 92 ~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~p-Dlvi~D~~~~~~~~vA~~~giP~v~ 148 (470)
. .+..+++++.+ .++ |++|.-....-...++...|+|..+
T Consensus 75 ~--------~~~~l~~~Lr~---------~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 75 S--------GLNEVAREINA---------KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp H--------HHHHHHHHHHH---------HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred H--------HHHHHHHHHhh---------CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 1 12234455554 389 9999765556667788888999765
No 54
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.12 E-value=0.011 Score=56.42 Aligned_cols=103 Identities=12% Similarity=0.048 Sum_probs=67.6
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCCcccccccCCCCCe-eEEecCCCCCCCcccccCHHHHHH
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSK--GFSVTIIHTDFNFSSTNYFSCNYPHF-DFHSFPDGFSETEASVEDVAVFFT 92 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~V~~~~~~~~~~~~~~~~~~~~gi-~~~~~~~~~~~~~~~~~~~~~~~~ 92 (470)
|||+++.....|++.-+..+.+.|+++ +.+|++++.+...+... ..+.+ +++.++.. .. ..
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~----~~p~i~~v~~~~~~--~~-------~~--- 64 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLS----RMPEVNEAIPMPLG--HG-------AL--- 64 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHT----TCTTEEEEEEC-------------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHh----cCCccCEEEEecCC--cc-------cc---
Confidence 589999999889999999999999987 99999999976665554 33455 34444311 00 00
Q ss_pred HHHhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCccchHHHHhhcCCCeEE
Q 012151 93 AINGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFWFFTHTVAADFKLPTIV 148 (470)
Q Consensus 93 ~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~~~~~~vA~~~giP~v~ 148 (470)
....+..+.+.+.+ .++|++|.-....-...++...|+|..+
T Consensus 65 -----~~~~~~~l~~~l~~---------~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 65 -----EIGERRKLGHSLRE---------KRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp -----CHHHHHHHHHHTTT---------TTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred -----chHHHHHHHHHHHh---------cCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 01122334455543 4899999433335566778888999744
No 55
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=95.97 E-value=0.033 Score=56.62 Aligned_cols=131 Identities=16% Similarity=0.117 Sum_probs=79.9
Q ss_pred eEEEEEcCcccccCHHHHHHHHHHHHhC---CCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHh---hh
Q 012151 284 SVVYISFGSVIAINKDGFLEIAWGVANS---RMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQE---VL 357 (470)
Q Consensus 284 ~~I~vs~Gs~~~~~~~~~~~i~~al~~~---~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~---lL 357 (470)
.++++..|... +.+.+..+++|++.+ +.+++++..++.. ....-.......++++.+....+... ++
T Consensus 327 ~p~i~~vgRl~--~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 399 (536)
T 3vue_A 327 IPLIAFIGRLE--EQKGPDVMAAAIPELMQEDVQIVLLGTGKKK-----FEKLLKSMEEKYPGKVRAVVKFNAPLAHLIM 399 (536)
T ss_dssp SCEEEEECCBS--GGGCHHHHHHHHHHHTTSSCEEEEECCBCHH-----HHHHHHHHHHHSTTTEEEECSCCHHHHHHHH
T ss_pred CcEEEEEeecc--ccCChHHHHHHHHHhHhhCCeEEEEeccCch-----HHHHHHHHHhhcCCceEEEEeccHHHHHHHH
Confidence 34556678775 345566777777654 4455544322210 00011223345567778877777644 67
Q ss_pred ccCCcceeeccc---Cc-hhhHHhhhcCCceecCCCccchhhhHHHHHhhhheeEEcCC---------cccHHHHHHHHH
Q 012151 358 AHPAVGGFWTHS---GW-NSTLESMCEGVPMICQPYLPDQMVNARYVSHFWRVGLHSEW---------KLERMEIERAIR 424 (470)
Q Consensus 358 ~~~~~~~~I~HG---G~-gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~---------~~~~~~l~~ai~ 424 (470)
+.+++ ||.-+ |. .+++||+++|+|+|+-. .......|.+. .-|..... ..+.+.|+++|+
T Consensus 400 ~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~----~gG~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai~ 472 (536)
T 3vue_A 400 AGADV--LAVPSRFEPCGLIQLQGMRYGTPCACAS----TGGLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATLK 472 (536)
T ss_dssp HHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECS----CTHHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHHH
T ss_pred Hhhhe--eecccccCCCCHHHHHHHHcCCCEEEcC----CCCchheeeCC-CCccccccCCCceeEECCCCHHHHHHHHH
Confidence 77887 77542 33 48899999999999954 44555566663 55553321 246789999999
Q ss_pred HHhc
Q 012151 425 RVMV 428 (470)
Q Consensus 425 ~vl~ 428 (470)
+++.
T Consensus 473 ral~ 476 (536)
T 3vue_A 473 RAIK 476 (536)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8875
No 56
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=95.31 E-value=0.14 Score=51.20 Aligned_cols=105 Identities=12% Similarity=0.080 Sum_probs=67.2
Q ss_pred eeccChHh---hhccCCcceeecc---cCch-hhHHhhhcCC-----ceecCCCccchhhhHHHHHhhhheeEEcCCccc
Q 012151 348 VKWAPQQE---VLAHPAVGGFWTH---SGWN-STLESMCEGV-----PMICQPYLPDQMVNARYVSHFWRVGLHSEWKLE 415 (470)
Q Consensus 348 ~~~~p~~~---lL~~~~~~~~I~H---GG~g-s~~eal~~Gv-----P~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~ 415 (470)
.+++++.+ ++..+++ ||.- =|+| ++.||+++|+ |+|+--..+--.. +.-|+.++. .+
T Consensus 337 ~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~--------l~~g~lv~p-~d 405 (482)
T 1uqt_A 337 NQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANE--------LTSALIVNP-YD 405 (482)
T ss_dssp CSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGT--------CTTSEEECT-TC
T ss_pred CCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHH--------hCCeEEECC-CC
Confidence 47778766 6777887 6653 3555 8899999998 6766444331111 123556666 57
Q ss_pred HHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 012151 416 RMEIERAIRRVMVEAEGQEMRARIMHLKEKVDFCLRKGGSSHQSLERLIDHILS 469 (470)
Q Consensus 416 ~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 469 (470)
.++++++|.++|++.+ +.-+++.+++.+.+++ -+....++.+++.|++
T Consensus 406 ~~~lA~ai~~lL~~~~-~~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~ 453 (482)
T 1uqt_A 406 RDEVAAALDRALTMSL-AERISRHAEMLDVIVK-----NDINHWQECFISDLKQ 453 (482)
T ss_dssp HHHHHHHHHHHHTCCH-HHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHh
Confidence 8999999999998421 2234444444444443 5677788888877754
No 57
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=95.26 E-value=0.032 Score=54.65 Aligned_cols=84 Identities=12% Similarity=-0.010 Sum_probs=57.9
Q ss_pred CCceeeeccChHh---hhccCCcceeeccc---Cc-hhhHHhhhcCCceecCCCccchhhhHHHHHhhhheeEEcCCccc
Q 012151 343 GRGCIVKWAPQQE---VLAHPAVGGFWTHS---GW-NSTLESMCEGVPMICQPYLPDQMVNARYVSHFWRVGLHSEWKLE 415 (470)
Q Consensus 343 ~~~~~~~~~p~~~---lL~~~~~~~~I~HG---G~-gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~ 415 (470)
+++.+.+++|+.+ ++..+++ ||.-+ |. .++.||+++|+|+|+ -..+ ....+++. ..|+.++. -+
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~-~d 365 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQ-LN 365 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESS-CS
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCC-CC
Confidence 4568889998765 6777887 77532 33 467999999999998 2222 12344552 57887776 68
Q ss_pred HHHHHHHHHHHhccchhHHHHHH
Q 012151 416 RMEIERAIRRVMVEAEGQEMRAR 438 (470)
Q Consensus 416 ~~~l~~ai~~vl~~~~~~~~~~~ 438 (470)
+++|+++|.++++| +..+++
T Consensus 366 ~~~la~ai~~ll~~---~~~~~~ 385 (413)
T 2x0d_A 366 PENIAETLVELCMS---FNNRDV 385 (413)
T ss_dssp HHHHHHHHHHHHHH---TC----
T ss_pred HHHHHHHHHHHHcC---HHHHHH
Confidence 89999999999998 554443
No 58
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=93.61 E-value=0.48 Score=47.15 Aligned_cols=109 Identities=10% Similarity=0.018 Sum_probs=72.7
Q ss_pred CceeeeccChHh---hhccCCcceeec---ccCchh-hHHhhhcC---CceecCCCccchhhhHHHHHhhhheeEEcCCc
Q 012151 344 RGCIVKWAPQQE---VLAHPAVGGFWT---HSGWNS-TLESMCEG---VPMICQPYLPDQMVNARYVSHFWRVGLHSEWK 413 (470)
Q Consensus 344 ~~~~~~~~p~~~---lL~~~~~~~~I~---HGG~gs-~~eal~~G---vP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~ 413 (470)
.+.+...+|+.+ ++..+++ |+. .=|+|. ..||+++| .|+|+--+.+ .+.-+.. -|+.+++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~~---~allVnP- 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLGE---YCRSVNP- 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHGG---GSEEECT-
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhCC---CEEEECC-
Confidence 466667788755 6667887 554 358884 58999996 6666543332 2222212 3677777
Q ss_pred ccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 012151 414 LERMEIERAIRRVMVEAEGQEMRARIMHLKEKVDFCLRKGGSSHQSLERLIDHIL 468 (470)
Q Consensus 414 ~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 468 (470)
.+.++++++|.++|++.+ +.-+++.+++.+.+++ .....-++.+++.|+
T Consensus 423 ~D~~~lA~AI~~aL~m~~-~er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~ 471 (496)
T 3t5t_A 423 FDLVEQAEAISAALAAGP-RQRAEAAARRRDAARP-----WTLEAWVQAQLDGLA 471 (496)
T ss_dssp TBHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHh
Confidence 688999999999998522 3455666666666654 667777888887775
No 59
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=92.56 E-value=0.52 Score=42.26 Aligned_cols=48 Identities=19% Similarity=0.018 Sum_probs=33.4
Q ss_pred CCCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccc
Q 012151 10 MVPRNGRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTN 59 (470)
Q Consensus 10 m~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~ 59 (470)
|.+.++||||+.-=-+. |---+.+|++.|.+ +|+|+++.|...++-+-
T Consensus 6 ~~~~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~g 53 (261)
T 3ty2_A 6 KTATPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGAS 53 (261)
T ss_dssp -----CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTCT
T ss_pred hccCCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCcc
Confidence 33456799988876664 55568889999976 89999999976665443
No 60
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=91.00 E-value=0.93 Score=46.68 Aligned_cols=46 Identities=17% Similarity=0.077 Sum_probs=32.8
Q ss_pred CCceee---eccCh---------HhhhccCCcceeeccc---C-chhhHHhhhcCCceecCCCc
Q 012151 343 GRGCIV---KWAPQ---------QEVLAHPAVGGFWTHS---G-WNSTLESMCEGVPMICQPYL 390 (470)
Q Consensus 343 ~~~~~~---~~~p~---------~~lL~~~~~~~~I~HG---G-~gs~~eal~~GvP~v~~P~~ 390 (470)
++|+++ .|++. .++++.+++ ||.-+ | ..+.+||+++|+|+|+.-..
T Consensus 490 drVKVIf~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 490 DRVKMIFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp CSEEEEECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred CceeEEEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 445543 77765 457888888 77654 3 45899999999999995443
No 61
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=90.35 E-value=3.2 Score=36.97 Aligned_cols=42 Identities=21% Similarity=0.146 Sum_probs=31.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccc
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTN 59 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~ 59 (470)
||||+.-=-+. |---+.+|++.|.+.| +|+++.|...++-+.
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g 43 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVG 43 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSC
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCc
Confidence 56777765553 5556889999999888 999999976665543
No 62
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=86.96 E-value=4.7 Score=35.87 Aligned_cols=42 Identities=19% Similarity=0.172 Sum_probs=29.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccc
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTN 59 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~ 59 (470)
||||+.-=-+. |---+..|++.|.+.| +|+++.|...++-+-
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g 42 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATG 42 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCT
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCc
Confidence 45666554443 4444889999998888 899999976665543
No 63
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=86.22 E-value=0.51 Score=47.79 Aligned_cols=37 Identities=16% Similarity=0.238 Sum_probs=28.9
Q ss_pred CCCEEEEEcCC--------CccChHHHHHHHHHHHhCCCeEEEEeCC
Q 012151 14 NGRRVILFPLP--------FQGHINPMLHLASILYSKGFSVTIIHTD 52 (470)
Q Consensus 14 ~~~~il~~~~~--------~~GH~~p~l~La~~L~~rGh~V~~~~~~ 52 (470)
++|||+++++- |-|++ .-+|+++|+++||+|++++|.
T Consensus 8 ~~MkIl~vs~E~~P~~K~GGLadv--v~~L~~aL~~~G~~V~Vi~P~ 52 (536)
T 3vue_A 8 HHMNVVFVGAEMAPWSKTGGLGDV--LGGLPPAMAANGHRVMVISPR 52 (536)
T ss_dssp CCCEEEEECSCBTTTBCSSHHHHH--HHHHHHHHHTTTCEEEEEEEC
T ss_pred CCcEEEEEEEeccchhccCcHHHH--HHHHHHHHHHcCCeEEEEecC
Confidence 57899999743 22333 568999999999999999974
No 64
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=86.21 E-value=10 Score=33.67 Aligned_cols=112 Identities=10% Similarity=-0.040 Sum_probs=61.9
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccCCCCCeeEEecCCCCC----CCcccccCHHHHH
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTNYFSCNYPHFDFHSFPDGFS----ETEASVEDVAVFF 91 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~----~~~~~~~~~~~~~ 91 (470)
||||+.-=-+. |---+..|++.|.+.| +|+++.|...++-+-.-..-..-+++..++.+.+ ....-...+....
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~~~~v~GTPaDCV 78 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAITIAHPVRAYPHPSPLHAPHFPAYRVRGTPADCV 78 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSCCCSSCBEEEECCCCTTSCCCCEEEEESCHHHHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCcCCCCCceEEEcCcHHHHH
Confidence 45666554443 4444889999998888 8999999766655442111123466666543210 0111112233322
Q ss_pred HHHHhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeC----------CCc---cchHHHHhhcCCCeEEEec
Q 012151 92 TAINGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITD----------AFW---FFTHTVAADFKLPTIVLQT 151 (470)
Q Consensus 92 ~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D----------~~~---~~~~~vA~~~giP~v~~~~ 151 (470)
.... . + . .+||+||+- .++ .+++.=|..+|||.|.+|.
T Consensus 79 ~lal-----------~-l-~---------~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 79 ALGL-----------H-L-F---------GPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp HHHH-----------H-H-S---------CSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHH-----------c-C-C---------CCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 2221 1 2 1 389999963 221 2344556789999999875
No 65
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=85.00 E-value=16 Score=30.48 Aligned_cols=141 Identities=13% Similarity=0.113 Sum_probs=84.5
Q ss_pred CeEEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCc
Q 012151 283 KSVVYISFGSVIAINKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAV 362 (470)
Q Consensus 283 ~~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~ 362 (470)
+|+|-|-+||.+ +....+...+.|++++..+-+.+-.. .+.|+.+.+.. .-.....+
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SA--------HRtp~~l~~~~-------------~~a~~~g~ 78 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA--------HRTPDYMFEYA-------------ETARERGL 78 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTSHHHHHHHH-------------HHTTTTTC
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcc--------ccChHHHHHHH-------------HHHHhcCc
Confidence 567888899997 56778889999999998876665332 34666543211 11111233
Q ss_pred ceeecccCch----hhHHhhhcCCceecCCCcc---chhhhHHHHHhhhheeEEcCC-c------ccHHHHHHHHHHHhc
Q 012151 363 GGFWTHSGWN----STLESMCEGVPMICQPYLP---DQMVNARYVSHFWRVGLHSEW-K------LERMEIERAIRRVMV 428 (470)
Q Consensus 363 ~~~I~HGG~g----s~~eal~~GvP~v~~P~~~---DQ~~na~rv~~~~G~G~~l~~-~------~~~~~l~~ai~~vl~ 428 (470)
+.+|.=.|.- ++..+ ..-+|+|++|... +-.+.-.-+.+ +--|+-+-. . .++.-++..|-. +.
T Consensus 79 ~ViIa~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSivQ-MP~GvpVaTvaig~~ga~NAallA~qILa-~~ 155 (181)
T 4b4k_A 79 KVIIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQ-MPGGVPVATVAIGKAGSTNAGLLAAQILG-SF 155 (181)
T ss_dssp CEEEEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHHT-CCTTCCCEECCSSHHHHHHHHHHHHHHHT-TT
T ss_pred eEEEEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHHh-CCCCCceEEEecCCccHHHHHHHHHHHHc-cC
Confidence 3377665532 33333 4568999999865 34444455565 455544433 2 233334433321 34
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhc
Q 012151 429 EAEGQEMRARIMHLKEKVDFCLRK 452 (470)
Q Consensus 429 ~~~~~~~~~~a~~l~~~~~~~~~~ 452 (470)
| ++++++.+.+++..++.+.+
T Consensus 156 d---~~l~~kl~~~r~~~~~~v~~ 176 (181)
T 4b4k_A 156 H---DDIHDALELRREAIEKDVRE 176 (181)
T ss_dssp C---HHHHHHHHHHHHHHHHHHHH
T ss_pred C---HHHHHHHHHHHHHHHHHHHH
Confidence 6 89999999999988876543
No 66
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=84.67 E-value=6.9 Score=35.51 Aligned_cols=42 Identities=17% Similarity=0.116 Sum_probs=29.7
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccc
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTN 59 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~ 59 (470)
||||+.-=-+. +---+..|++.|.+.| +|+++.|...++-+-
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g 42 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATG 42 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSC
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCc
Confidence 45666554443 4444889999999888 999999976665543
No 67
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=84.35 E-value=0.43 Score=46.53 Aligned_cols=40 Identities=33% Similarity=0.420 Sum_probs=31.8
Q ss_pred CCCEEEEEcCCCc-----cChHHHHHHHHHHHhCCCeEEEEeCCC
Q 012151 14 NGRRVILFPLPFQ-----GHINPMLHLASILYSKGFSVTIIHTDF 53 (470)
Q Consensus 14 ~~~~il~~~~~~~-----GH~~p~l~La~~L~~rGh~V~~~~~~~ 53 (470)
.+|||++++.... |=...+..||++|+++||+|+++++..
T Consensus 45 ~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 45 KGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 5789999886532 333568899999999999999999864
No 68
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=83.24 E-value=18 Score=29.82 Aligned_cols=141 Identities=12% Similarity=0.089 Sum_probs=84.7
Q ss_pred CeEEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCc
Q 012151 283 KSVVYISFGSVIAINKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAV 362 (470)
Q Consensus 283 ~~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~ 362 (470)
||.|-|-+||.+ +.+..+.....|+.++.++=+.+-. ..+.|+.+.+.. .+ .....+
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~S--------aHR~p~~l~~~~----------~~---a~~~g~ 67 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVS--------AHRTPDYMFEYA----------ET---ARERGL 67 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC--------TTTSHHHHHHHH----------HH---TTTTTC
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEe--------ccCCHHHHHHHH----------HH---HHhCCC
Confidence 456777888887 6778888999999999887555533 234666553211 00 011112
Q ss_pred ceeecccCch----hhHHhhhcCCceecCCCccc--hhhhH-HHHHh--hhheeEE---cC--CcccHHHHHHHHHHHhc
Q 012151 363 GGFWTHSGWN----STLESMCEGVPMICQPYLPD--QMVNA-RYVSH--FWRVGLH---SE--WKLERMEIERAIRRVMV 428 (470)
Q Consensus 363 ~~~I~HGG~g----s~~eal~~GvP~v~~P~~~D--Q~~na-~rv~~--~~G~G~~---l~--~~~~~~~l~~ai~~vl~ 428 (470)
+.+|.=.|.. ++..++ .-+|+|.+|.... ....+ .-+.+ . |+.+. ++ ...++.-++..|. -+.
T Consensus 68 ~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~ 144 (170)
T 1xmp_A 68 KVIIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSKALNGLDSLLSIVQMPG-GVPVATVAIGKAGSTNAGLLAAQIL-GSF 144 (170)
T ss_dssp CEEEEEEESSCCHHHHHHTT-CCSCEEEEEECCTTTTTHHHHHHHHCCCT-TCCCEECCSSHHHHHHHHHHHHHHH-HTT
T ss_pred cEEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEEecCCcchHHHHHHHHHHH-ccC
Confidence 3377666633 333333 4689999998653 22222 23344 3 55431 23 1356666666664 345
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhc
Q 012151 429 EAEGQEMRARIMHLKEKVDFCLRK 452 (470)
Q Consensus 429 ~~~~~~~~~~a~~l~~~~~~~~~~ 452 (470)
| +.++++.+.++++.++.+.+
T Consensus 145 d---~~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 145 H---DDIHDALELRREAIEKDVRE 165 (170)
T ss_dssp C---HHHHHHHHHHHHHHHHHHHC
T ss_pred C---HHHHHHHHHHHHHHHHHHHh
Confidence 6 89999999999999876543
No 69
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=83.18 E-value=3.2 Score=37.16 Aligned_cols=41 Identities=22% Similarity=0.156 Sum_probs=27.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccc
Q 012151 17 RVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTN 59 (470)
Q Consensus 17 ~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~ 59 (470)
|||+.-=-+. +---+..|+++|.+.| +|+++.|...++-+-
T Consensus 3 ~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g 43 (251)
T 2wqk_A 3 TFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVG 43 (251)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSC
T ss_pred EEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccc
Confidence 5666544443 3344788999999888 599999876655443
No 70
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=82.76 E-value=8.1 Score=34.49 Aligned_cols=42 Identities=24% Similarity=0.176 Sum_probs=30.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccc
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTN 59 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~ 59 (470)
||||+.-=-+. |---+..|++.|.+.| +|+++.|...++-+.
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~g 43 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGAS 43 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCT
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCcc
Confidence 57777665553 4455888999998776 999999976665543
No 71
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=80.74 E-value=24 Score=29.50 Aligned_cols=139 Identities=12% Similarity=0.092 Sum_probs=84.2
Q ss_pred eEEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcc
Q 012151 284 SVVYISFGSVIAINKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVG 363 (470)
Q Consensus 284 ~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~ 363 (470)
|.|-|-+||.+ +.+..+.....|+.++.++=+.+-+ ..+.|+.+.+... . .....++
T Consensus 14 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~S--------aHR~p~~l~~~~~----------~---a~~~g~~ 70 (183)
T 1o4v_A 14 PRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVS--------AHRTPDRMFEYAK----------N---AEERGIE 70 (183)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECC--------TTTCHHHHHHHHH----------H---TTTTTCC
T ss_pred CeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEc--------ccCCHHHHHHHHH----------H---HHhCCCc
Confidence 57788888887 6777888999999999886555533 2456665532210 0 1111223
Q ss_pred eeecccCc----hhhHHhhhcCCceecCCCccc--hhhhH-HHHHhhh--heeEEc---CCcccHHHHHHHHHHHhccch
Q 012151 364 GFWTHSGW----NSTLESMCEGVPMICQPYLPD--QMVNA-RYVSHFW--RVGLHS---EWKLERMEIERAIRRVMVEAE 431 (470)
Q Consensus 364 ~~I~HGG~----gs~~eal~~GvP~v~~P~~~D--Q~~na-~rv~~~~--G~G~~l---~~~~~~~~l~~ai~~vl~~~~ 431 (470)
.+|.=.|. .++..++ .-+|+|.+|.... ....+ .-+.+ + |+.+.. +...++.-++..|. -+.|
T Consensus 71 ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivq-mP~GvpVatV~Id~~~nAa~lAaqIl-a~~d-- 145 (183)
T 1o4v_A 71 VIIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQ-MPGGVPVATVAINNAKNAGILAASIL-GIKY-- 145 (183)
T ss_dssp EEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTCCCEECCTTCHHHHHHHHHHHH-HTTC--
T ss_pred EEEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhc-CCCCCeeEEEecCCchHHHHHHHHHH-hcCC--
Confidence 37766653 2444444 6789999998652 22222 33455 5 533221 22566777776664 3456
Q ss_pred hHHHHHHHHHHHHHHHHHHh
Q 012151 432 GQEMRARIMHLKEKVDFCLR 451 (470)
Q Consensus 432 ~~~~~~~a~~l~~~~~~~~~ 451 (470)
+.++++.+..+++..+.+.
T Consensus 146 -~~l~~kL~~~r~~~~~~v~ 164 (183)
T 1o4v_A 146 -PEIARKVKEYKERMKREVL 164 (183)
T ss_dssp -HHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHH
Confidence 7889999888888877644
No 72
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=80.44 E-value=6.3 Score=33.46 Aligned_cols=76 Identities=18% Similarity=0.197 Sum_probs=49.5
Q ss_pred CCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccCCCCCeeEEecCCCCCCCcccccCHHHHHHHHHhhcchHH
Q 012151 23 LPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTNYFSCNYPHFDFHSFPDGFSETEASVEDVAVFFTAINGKCIMPF 102 (470)
Q Consensus 23 ~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 102 (470)
-++-|-..-...||..|+++|++|.++-.+.......-+.....++.+.+.+. ..+
T Consensus 10 kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~~~~~~~~~~~~~~~~~~~~~------------------------~~l 65 (206)
T 4dzz_A 10 KGGSGKTTAVINIATALSRSGYNIAVVDTDPQMSLTNWSKAGKAAFDVFTAAS------------------------EKD 65 (206)
T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHTTSCCSSEEEECCS------------------------HHH
T ss_pred CCCccHHHHHHHHHHHHHHCCCeEEEEECCCCCCHHHHHhcCCCCCcEEecCc------------------------HHH
Confidence 45568999999999999999999999987644333221111223444444321 344
Q ss_pred HHHHHHHHhcccCCCCCCCCCcEEEeCCCc
Q 012151 103 RDCLAEILMKSKADQNKDSSPCCLITDAFW 132 (470)
Q Consensus 103 ~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~ 132 (470)
.+.++++. ..+|+||.|.-.
T Consensus 66 ~~~l~~l~----------~~yD~viiD~~~ 85 (206)
T 4dzz_A 66 VYGIRKDL----------ADYDFAIVDGAG 85 (206)
T ss_dssp HHTHHHHT----------TTSSEEEEECCS
T ss_pred HHHHHHhc----------CCCCEEEEECCC
Confidence 55566664 279999999543
No 73
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=79.54 E-value=3.5 Score=38.33 Aligned_cols=44 Identities=11% Similarity=0.046 Sum_probs=39.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCCcccc
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSK--GFSVTIIHTDFNFSSTN 59 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~V~~~~~~~~~~~~~ 59 (470)
|||+++-..+.|++.-+.++.+.|+++ +.+|++++.+...+...
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~ 46 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPS 46 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHH
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHh
Confidence 589999999999999999999999987 89999999987766665
No 74
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=78.52 E-value=1.2 Score=41.65 Aligned_cols=130 Identities=13% Similarity=0.048 Sum_probs=72.3
Q ss_pred CCeEEEEEcCcccc---cCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccC---hHh
Q 012151 282 PKSVVYISFGSVIA---INKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAP---QQE 355 (470)
Q Consensus 282 ~~~~I~vs~Gs~~~---~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p---~~~ 355 (470)
+++.|.+.-|+... .+.+.+..+++.+.+.+.++++..++.. ....-+.+.+.. .++.+.+-.+ ..+
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~------e~~~~~~i~~~~-~~~~l~g~~sl~el~a 249 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPH------EEERAKRLAEGF-AYVEVLPKMSLEGVAR 249 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHH------HHHHHHHHHTTC-TTEEECCCCCHHHHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHH------HHHHHHHHHhhC-CcccccCCCCHHHHHH
Confidence 45577777776543 6677788888888766666655432210 000111111111 1222333222 344
Q ss_pred hhccCCcceeecc-cCchhhHHhhhcCCceecC--CCccchhhhHHHHHhhhhee-EEc-----CC-cccHHHHHHHHHH
Q 012151 356 VLAHPAVGGFWTH-SGWNSTLESMCEGVPMICQ--PYLPDQMVNARYVSHFWRVG-LHS-----EW-KLERMEIERAIRR 425 (470)
Q Consensus 356 lL~~~~~~~~I~H-GG~gs~~eal~~GvP~v~~--P~~~DQ~~na~rv~~~~G~G-~~l-----~~-~~~~~~l~~ai~~ 425 (470)
++.++++ +|+. +| +++=|.+.|+|+|++ |..... ++ = +|-. ..+ .. .++++++.+++.+
T Consensus 250 li~~a~l--~I~~DSG--~~HlAaa~g~P~v~lfg~t~p~~--~~----P-~~~~~~~~~~~~~cm~~I~~~~V~~~i~~ 318 (326)
T 2gt1_A 250 VLAGAKF--VVSVDTG--LSHLTAALDRPNITVYGPTDPGL--IG----G-YGKNQMVCRAPGNELSQLTANAVKQFIEE 318 (326)
T ss_dssp HHHTCSE--EEEESSH--HHHHHHHTTCCEEEEESSSCHHH--HC----C-CSSSEEEEECGGGCGGGCCHHHHHHHHHH
T ss_pred HHHhCCE--EEecCCc--HHHHHHHcCCCEEEEECCCChhh--cC----C-CCCCceEecCCcccccCCCHHHHHHHHHH
Confidence 8888887 9998 54 455577799999998 432211 11 0 1111 111 11 6899999999999
Q ss_pred Hhcc
Q 012151 426 VMVE 429 (470)
Q Consensus 426 vl~~ 429 (470)
++++
T Consensus 319 ~l~~ 322 (326)
T 2gt1_A 319 NAEK 322 (326)
T ss_dssp TTTT
T ss_pred HHHH
Confidence 9875
No 75
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=77.32 E-value=30 Score=28.81 Aligned_cols=140 Identities=11% Similarity=0.080 Sum_probs=84.1
Q ss_pred eEEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcc
Q 012151 284 SVVYISFGSVIAINKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVG 363 (470)
Q Consensus 284 ~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~ 363 (470)
+.|-|-+||.+ +....+.....|+.++.++=+.+-. ..+.|+.+.+.. .+ .....++
T Consensus 22 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~S--------aHR~p~~l~~~~----------~~---a~~~g~~ 78 (182)
T 1u11_A 22 PVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVS--------AHRTPDRLADYA----------RT---AAERGLN 78 (182)
T ss_dssp CSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC--------TTTCHHHHHHHH----------HH---TTTTTCC
T ss_pred CEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEc--------ccCCHHHHHHHH----------HH---HHhCCCc
Confidence 45667778886 6777888999999999886555533 245666553211 00 0111123
Q ss_pred eeecccCc----hhhHHhhhcCCceecCCCccc--hhhhH-HHHHh--hhheeEE---cC--CcccHHHHHHHHHHHhcc
Q 012151 364 GFWTHSGW----NSTLESMCEGVPMICQPYLPD--QMVNA-RYVSH--FWRVGLH---SE--WKLERMEIERAIRRVMVE 429 (470)
Q Consensus 364 ~~I~HGG~----gs~~eal~~GvP~v~~P~~~D--Q~~na-~rv~~--~~G~G~~---l~--~~~~~~~l~~ai~~vl~~ 429 (470)
.+|.=.|. .++..++ .-+|+|.+|.... ....+ .-+.+ . |+.+. ++ ...++.-++..|. -+.|
T Consensus 79 ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~d 155 (182)
T 1u11_A 79 VIIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPG-GVPVGTLAIGASGAKNAALLAASIL-ALYN 155 (182)
T ss_dssp EEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCT-TSCCEECCSSHHHHHHHHHHHHHHH-GGGC
T ss_pred EEEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCceEEEecCCccchHHHHHHHHHH-ccCC
Confidence 37776663 3444444 4789999998652 22222 23344 3 55522 23 1356666666654 3456
Q ss_pred chhHHHHHHHHHHHHHHHHHHhc
Q 012151 430 AEGQEMRARIMHLKEKVDFCLRK 452 (470)
Q Consensus 430 ~~~~~~~~~a~~l~~~~~~~~~~ 452 (470)
+.++++.+.++++.++.+.+
T Consensus 156 ---~~l~~kL~~~r~~~~~~v~~ 175 (182)
T 1u11_A 156 ---PALAARLETWRALQTASVPN 175 (182)
T ss_dssp ---HHHHHHHHHHHHHHHHHSCS
T ss_pred ---HHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999887554
No 76
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=76.82 E-value=11 Score=32.10 Aligned_cols=98 Identities=11% Similarity=0.117 Sum_probs=62.2
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCC------cccccccCCCCCeeEEecCCCCCCCcccccCH
Q 012151 14 NGRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNF------SSTNYFSCNYPHFDFHSFPDGFSETEASVEDV 87 (470)
Q Consensus 14 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~------~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~ 87 (470)
++..|++++..+.|-..-.+.+|.....+|++|.|+..-... ..... -++++.....++.... .+.
T Consensus 27 ~~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~-----L~v~~~~~g~gf~~~~---~~~ 98 (196)
T 1g5t_A 27 ERGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEP-----HGVEFQVMATGFTWET---QNR 98 (196)
T ss_dssp CCCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGG-----GTCEEEECCTTCCCCG---GGH
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHh-----CCcEEEEcccccccCC---CCc
Confidence 346799999999999999999999999999999999764321 12232 2588888876554321 111
Q ss_pred HHHHHHHHhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCc
Q 012151 88 AVFFTAINGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFW 132 (470)
Q Consensus 88 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~ 132 (470)
.. -...+...+....+.+.+ .++|+||.|.+.
T Consensus 99 ~~----~~~~a~~~l~~a~~~l~~---------~~yDlvILDEi~ 130 (196)
T 1g5t_A 99 EA----DTAACMAVWQHGKRMLAD---------PLLDMVVLDELT 130 (196)
T ss_dssp HH----HHHHHHHHHHHHHHHTTC---------TTCSEEEEETHH
T ss_pred HH----HHHHHHHHHHHHHHHHhc---------CCCCEEEEeCCC
Confidence 11 111223333333333322 379999999754
No 77
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=75.44 E-value=34 Score=28.35 Aligned_cols=138 Identities=14% Similarity=0.111 Sum_probs=80.2
Q ss_pred CeEEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCc
Q 012151 283 KSVVYISFGSVIAINKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAV 362 (470)
Q Consensus 283 ~~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~ 362 (470)
++.|-|-+||.+ +....+.....|+.++.++=+.+-+ ..+.|+.+.+. +-..+ -...++
T Consensus 7 ~~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~S--------aHR~p~~~~~~----------~~~a~-~~g~~V 65 (174)
T 3lp6_A 7 RPRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVS--------AHRTPEAMFSY----------ARGAA-ARGLEV 65 (174)
T ss_dssp CCSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC--------TTTCHHHHHHH----------HHHHH-HHTCCE
T ss_pred CCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEC--------CCCCHHHHHHH----------HHHHH-hCCCCE
Confidence 345666778886 6677888899999999887555533 24466655321 11000 012344
Q ss_pred ceeecccCch----hhHHhhhcCCceecCCCccch---hhhHHHHHhhh--he--eEEc-CCcccHHHHHHHHHHHhccc
Q 012151 363 GGFWTHSGWN----STLESMCEGVPMICQPYLPDQ---MVNARYVSHFW--RV--GLHS-EWKLERMEIERAIRRVMVEA 430 (470)
Q Consensus 363 ~~~I~HGG~g----s~~eal~~GvP~v~~P~~~DQ---~~na~rv~~~~--G~--G~~l-~~~~~~~~l~~ai~~vl~~~ 430 (470)
+|.=.|.. ++..++ .-+|+|.+|....- .+--.-+.+ + |+ +... +...++..++..|.. +.|
T Consensus 66 --iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlS~vq-mp~GvpVatV~I~~~~nAa~lAa~Il~-~~d- 139 (174)
T 3lp6_A 66 --IIAGAGGAAHLPGMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIVQ-MPAGVPVATVSIGGAGNAGLLAVRMLG-AAN- 139 (174)
T ss_dssp --EEEEEESSCCHHHHHHHH-CSSCEEEEEECCSSGGGHHHHHHHHC-CCTTCCCEECCTTCHHHHHHHHHHHHH-TTC-
T ss_pred --EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhh-CCCCCeeEEEEcCcchHHHHHHHHHHh-CCC-
Confidence 77766633 444443 56899999986421 111122333 2 32 2222 224566666665543 345
Q ss_pred hhHHHHHHHHHHHHHHHHH
Q 012151 431 EGQEMRARIMHLKEKVDFC 449 (470)
Q Consensus 431 ~~~~~~~~a~~l~~~~~~~ 449 (470)
+.++++.+.++++.++.
T Consensus 140 --~~l~~kl~~~r~~~~~~ 156 (174)
T 3lp6_A 140 --PQLRARIVAFQDRLADV 156 (174)
T ss_dssp --HHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHH
Confidence 78999999999888875
No 78
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=74.92 E-value=15 Score=29.96 Aligned_cols=136 Identities=11% Similarity=0.021 Sum_probs=79.6
Q ss_pred eEEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccC-Cc
Q 012151 284 SVVYISFGSVIAINKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHP-AV 362 (470)
Q Consensus 284 ~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~-~~ 362 (470)
+.|-|-+||.+ +....+.....|+.++.++-+.+-+ ..+.|+.+.+.. ... ... .+
T Consensus 3 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~s--------aHR~p~~~~~~~----------~~a---~~~~~~ 59 (159)
T 3rg8_A 3 PLVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGS--------AHKTAEHVVSML----------KEY---EALDRP 59 (159)
T ss_dssp CEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECC--------TTTCHHHHHHHH----------HHH---HTSCSC
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEc--------ccCCHHHHHHHH----------HHh---hhcCCC
Confidence 35666678876 6677888889999998876555533 245666553211 111 111 23
Q ss_pred ceeecccCch----hhHHhhhcCCceecCCCcc---chhhhHHHHHhhh--heeEE-cCCcccHHHHHHHHHHHhccchh
Q 012151 363 GGFWTHSGWN----STLESMCEGVPMICQPYLP---DQMVNARYVSHFW--RVGLH-SEWKLERMEIERAIRRVMVEAEG 432 (470)
Q Consensus 363 ~~~I~HGG~g----s~~eal~~GvP~v~~P~~~---DQ~~na~rv~~~~--G~G~~-l~~~~~~~~l~~ai~~vl~~~~~ 432 (470)
+.+|.=.|.. ++..++ .-+|+|.+|... +-.+ -.-+.+ + |+.+. ++...++.-++..|.. ++|
T Consensus 60 ~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~d-LlS~vq-mp~GvpVatv~~~~nAa~lA~~Il~-~~d--- 132 (159)
T 3rg8_A 60 KLYITIAGRSNALSGFVDGF-VKGATIACPPPSDSFAGAD-IYSSLR-MPSGISPALVLEPKNAALLAARIFS-LYD--- 132 (159)
T ss_dssp EEEEEECCSSCCHHHHHHHH-SSSCEEECCCCCCGGGGTH-HHHHHC-CCTTCCCEECCSHHHHHHHHHHHHT-TTC---
T ss_pred cEEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCcc-HHHHHh-CCCCCceEEecCchHHHHHHHHHHh-CCC---
Confidence 3477776643 444443 568999999653 2222 233333 2 44332 2334566666555533 346
Q ss_pred HHHHHHHHHHHHHHHHH
Q 012151 433 QEMRARIMHLKEKVDFC 449 (470)
Q Consensus 433 ~~~~~~a~~l~~~~~~~ 449 (470)
+.++++.+.++++.++.
T Consensus 133 ~~l~~kl~~~r~~~~~~ 149 (159)
T 3rg8_A 133 KEIADSVKSYMESNAQK 149 (159)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 78999999988888764
No 79
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=72.47 E-value=5.5 Score=32.05 Aligned_cols=46 Identities=17% Similarity=0.205 Sum_probs=33.0
Q ss_pred CCCEEEEE-cCCCc-cChHHHHHHHHHHHhCCCeEEEEeCCCCCcccc
Q 012151 14 NGRRVILF-PLPFQ-GHINPMLHLASILYSKGFSVTIIHTDFNFSSTN 59 (470)
Q Consensus 14 ~~~~il~~-~~~~~-GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~ 59 (470)
+.|+++++ ..|.. ..+--.+-++..|.++||+|++++.+.-..+++
T Consensus 5 ~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLle 52 (157)
T 1kjn_A 5 STGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQ 52 (157)
T ss_dssp -CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred cceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhhee
Confidence 45555554 33433 667778999999999999999999976555554
No 80
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=71.65 E-value=42 Score=27.73 Aligned_cols=141 Identities=11% Similarity=0.091 Sum_probs=80.9
Q ss_pred CCeEEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCC
Q 012151 282 PKSVVYISFGSVIAINKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPA 361 (470)
Q Consensus 282 ~~~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~ 361 (470)
..|.|-|-+||.+ +....+.....|+.++..+=+.+.. .++.|+.+.+.. - -...-.
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~s--------aHR~p~~l~~~~----------~---~a~~~g 67 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVS--------AHRMPDEMFDYA----------E---KARERG 67 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC--------TTTSHHHHHHHH----------H---HHTTTT
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEc--------cccCHHHHHHHH----------H---HHHhcC
Confidence 3467778889987 6677888899999999887555533 245666543211 1 111122
Q ss_pred cceeecccCc----hhhHHhhhcCCceecCCCccc---hhhhHHHHHhhhheeEEcCC-------cccHHHHHHHHHHHh
Q 012151 362 VGGFWTHSGW----NSTLESMCEGVPMICQPYLPD---QMVNARYVSHFWRVGLHSEW-------KLERMEIERAIRRVM 427 (470)
Q Consensus 362 ~~~~I~HGG~----gs~~eal~~GvP~v~~P~~~D---Q~~na~rv~~~~G~G~~l~~-------~~~~~~l~~ai~~vl 427 (470)
++.+|.=.|. .++..+ ..-+|+|.+|.... -.+--.-+.+ +--|+-+-. ..++.-++..| --+
T Consensus 68 ~~ViIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivq-MP~Gvpvatv~i~~~~a~NAallA~~I-La~ 144 (173)
T 4grd_A 68 LRAIIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQ-MPKGVPVATFAIGEAGAANAALFAVSI-LSG 144 (173)
T ss_dssp CSEEEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHC-CCTTSCCEECCSSHHHHHHHHHHHHHH-HTT
T ss_pred CeEEEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHh-CCCCCCceEEecCCcchHHHHHHHHHH-HcC
Confidence 3336665552 244444 45789999997653 2222233333 333322211 23444444444 224
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHh
Q 012151 428 VEAEGQEMRARIMHLKEKVDFCLR 451 (470)
Q Consensus 428 ~~~~~~~~~~~a~~l~~~~~~~~~ 451 (470)
+| ++++++.++++++.++.+.
T Consensus 145 ~d---~~l~~kl~~~r~~~~~~v~ 165 (173)
T 4grd_A 145 NS---VDYANRLAAFRVRQNEAAH 165 (173)
T ss_dssp SC---HHHHHHHHHHHHHHHHHHH
T ss_pred CC---HHHHHHHHHHHHHHHHHHH
Confidence 56 8999999999998887644
No 81
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=70.34 E-value=45 Score=27.58 Aligned_cols=141 Identities=13% Similarity=0.101 Sum_probs=81.3
Q ss_pred eEEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcc
Q 012151 284 SVVYISFGSVIAINKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVG 363 (470)
Q Consensus 284 ~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~ 363 (470)
+.|-|-+||.+ +.+..+.....|+.++.++=+.+-. ..+.|+.+.+... =.....++
T Consensus 13 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~S--------aHR~p~~~~~~~~-------------~a~~~g~~ 69 (174)
T 3kuu_A 13 VKIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVS--------AHRTPDRLFSFAE-------------QAEANGLH 69 (174)
T ss_dssp CCEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC--------TTTCHHHHHHHHH-------------HTTTTTCS
T ss_pred CcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEc--------ccCCHHHHHHHHH-------------HHHhCCCc
Confidence 34666678876 6677888899999999887665533 2456665532110 01112233
Q ss_pred eeecccCch----hhHHhhhcCCceecCCCccc---hhhhHHHHHhhh--he--eEE-cC--CcccHHHHHHHHHHHhcc
Q 012151 364 GFWTHSGWN----STLESMCEGVPMICQPYLPD---QMVNARYVSHFW--RV--GLH-SE--WKLERMEIERAIRRVMVE 429 (470)
Q Consensus 364 ~~I~HGG~g----s~~eal~~GvP~v~~P~~~D---Q~~na~rv~~~~--G~--G~~-l~--~~~~~~~l~~ai~~vl~~ 429 (470)
.+|.=.|.. ++..++ .-+|+|.+|.... -.+--.-..+ + |+ +.. ++ ...++.-++..|.. +.|
T Consensus 70 ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vq-mP~GvPVatV~I~~a~~~nAa~lAa~ILa-~~d 146 (174)
T 3kuu_A 70 VIIAGNGGAAHLPGMLAAK-TLVPVLGVPVQSAALSGVDSLYSIVQ-MPRGIPVGTLAIGKAGAANAALLAAQILA-LHD 146 (174)
T ss_dssp EEEEEEESSCCHHHHHHHT-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTSCCEECCSSHHHHHHHHHHHHHHHH-TTC
T ss_pred EEEEECChhhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHhhh-CCCCCeeEEEEeCCccchHHHHHHHHHHc-CCC
Confidence 377766643 333333 3689999998642 1121223333 2 43 212 12 12455555555533 356
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcC
Q 012151 430 AEGQEMRARIMHLKEKVDFCLRKG 453 (470)
Q Consensus 430 ~~~~~~~~~a~~l~~~~~~~~~~~ 453 (470)
+.++++.+++++++++.+.+.
T Consensus 147 ---~~l~~kl~~~r~~~~~~v~~~ 167 (174)
T 3kuu_A 147 ---TELAGRLAHWRQSQTDDVLDN 167 (174)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHTC
T ss_pred ---HHHHHHHHHHHHHHHHHHHhC
Confidence 899999999999998876543
No 82
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=68.06 E-value=4.7 Score=42.34 Aligned_cols=109 Identities=10% Similarity=0.052 Sum_probs=78.5
Q ss_pred eccChHhhhccCCcceeecccCchhhHHhhhcCCceecCCCccchhhhHHHHHhhhheeEEc----CC--cccHHHHHHH
Q 012151 349 KWAPQQEVLAHPAVGGFWTHSGWNSTLESMCEGVPMICQPYLPDQMVNARYVSHFWRVGLHS----EW--KLERMEIERA 422 (470)
Q Consensus 349 ~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l----~~--~~~~~~l~~a 422 (470)
++.+-.++|..+++ +||=- .+.+.|.+..++|+|......|++.+- . .|.=... .. ..+.++|.++
T Consensus 605 ~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~----~-rg~y~d~~~~~pg~~~~~~~eL~~~ 676 (729)
T 3l7i_A 605 NYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDKG----L-RGFYMNYMEDLPGPIYTEPYGLAKE 676 (729)
T ss_dssp TCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTSS----C-CSBSSCTTSSSSSCEESSHHHHHHH
T ss_pred CCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhhc----c-CCcccChhHhCCCCeECCHHHHHHH
Confidence 55677789988888 99874 468899999999999998877776531 1 1332211 11 4578999999
Q ss_pred HHHHhccchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 012151 423 IRRVMVEAEGQEMRARIMHLKEKVDFCLRKGGSSHQSLERLIDHIL 468 (470)
Q Consensus 423 i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 468 (470)
|++...+. ..|+++.+++.+++-. .+.|.++.+.++.|.+..+
T Consensus 677 i~~~~~~~--~~~~~~~~~~~~~~~~-~~dg~as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 677 LKNLDKVQ--QQYQEKIDAFYDRFCS-VDNGKASQYIGDLIHKDIK 719 (729)
T ss_dssp HTTHHHHH--HHTHHHHHHHHHHHST-TCCSCHHHHHHHHHHHHHH
T ss_pred Hhhhhccc--hhHHHHHHHHHHHhCC-ccCChHHHHHHHHHHhcCc
Confidence 98887631 5688888888888754 4667888888888877654
No 83
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=67.47 E-value=7.6 Score=32.52 Aligned_cols=42 Identities=21% Similarity=0.060 Sum_probs=34.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccc
Q 012151 17 RVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTN 59 (470)
Q Consensus 17 ~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~ 59 (470)
||++.-.++.|=+ -...|.+.|+++|++|.++.++.-.+.+.
T Consensus 7 ~IllgvTGs~aa~-k~~~ll~~L~~~g~~V~vv~T~~A~~fi~ 48 (175)
T 3qjg_A 7 NVLICLCGSVNSI-NISHYIIELKSKFDEVNVIASTNGRKFIN 48 (175)
T ss_dssp EEEEEECSSGGGG-GHHHHHHHHTTTCSEEEEEECTGGGGGSC
T ss_pred EEEEEEeCHHHHH-HHHHHHHHHHHCCCEEEEEECcCHHHHhh
Confidence 7888777775555 48999999999999999999976666554
No 84
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=65.45 E-value=46 Score=29.79 Aligned_cols=41 Identities=20% Similarity=0.254 Sum_probs=31.8
Q ss_pred CCEEEEEcC--CCccChHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 012151 15 GRRVILFPL--PFQGHINPMLHLASILYSKGFSVTIIHTDFNF 55 (470)
Q Consensus 15 ~~~il~~~~--~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~ 55 (470)
++++++++. ++-|-..-...||..|+++|.+|.++-.+...
T Consensus 81 ~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~~ 123 (271)
T 3bfv_A 81 AVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMRK 123 (271)
T ss_dssp CCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCSSS
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 345555543 56689999999999999999999998776443
No 85
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=64.17 E-value=11 Score=32.68 Aligned_cols=44 Identities=16% Similarity=0.033 Sum_probs=35.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccc
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTN 59 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~ 59 (470)
+.||++.-.++.|-+. ...|.+.|.++|++|.++.++.-...+.
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~ 47 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMA 47 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHH
Confidence 4578888888867666 8999999999999999999965555544
No 86
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=63.54 E-value=23 Score=30.12 Aligned_cols=31 Identities=10% Similarity=0.113 Sum_probs=25.2
Q ss_pred CCcceeecccCchhhHHhhhcCCceecCCCcc
Q 012151 360 PAVGGFWTHSGWNSTLESMCEGVPMICQPYLP 391 (470)
Q Consensus 360 ~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~ 391 (470)
.+++.+|+.||.......- .++|+|-++..+
T Consensus 50 ~~~dVIISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 50 DEVDAIISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TTCSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCCeEEEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 4444599999999988875 579999999865
No 87
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=63.50 E-value=6.6 Score=35.74 Aligned_cols=32 Identities=28% Similarity=0.426 Sum_probs=23.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
|||++.-.. |-+- ..|++.|.++||+|+.++-
T Consensus 1 MkILVTGat--GfIG--~~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVGGGT--GFIG--TALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEEEETTT--SHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC--CHHH--HHHHHHHHHCCCEEEEEEC
Confidence 677766433 4443 4688999999999999864
No 88
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=63.16 E-value=12 Score=36.61 Aligned_cols=41 Identities=15% Similarity=0.096 Sum_probs=35.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCc
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFS 56 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~ 56 (470)
--+++...|+.|-..-++.+|...+.+|..|.|++.+...+
T Consensus 198 ~liiIaG~pG~GKTtlal~ia~~~a~~g~~vl~fSlEms~~ 238 (444)
T 3bgw_A 198 NFVLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMGKK 238 (444)
T ss_dssp CEEEEEECSSSSHHHHHHHHHHHHHHTTCEEEEECSSSCTT
T ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHcCCEEEEEECCCCHH
Confidence 35788888899999999999999998999999999875544
No 89
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=62.74 E-value=3.8 Score=38.49 Aligned_cols=41 Identities=15% Similarity=0.202 Sum_probs=35.0
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcc
Q 012151 17 RVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSS 57 (470)
Q Consensus 17 ~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~ 57 (470)
-+++...|+.|-..-++.+|..++..|..|.|++.+.....
T Consensus 48 LiiIaG~pG~GKTt~al~ia~~~a~~g~~Vl~fSlEms~~q 88 (338)
T 4a1f_A 48 LVIIGARPSMGKTSLMMNMVLSALNDDRGVAVFSLEMSAEQ 88 (338)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCEEEEEESSSCHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHcCCeEEEEeCCCCHHH
Confidence 57778888889999999999999999999999998755443
No 90
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=61.82 E-value=65 Score=26.34 Aligned_cols=138 Identities=10% Similarity=0.066 Sum_probs=79.8
Q ss_pred eEEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcc
Q 012151 284 SVVYISFGSVIAINKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVG 363 (470)
Q Consensus 284 ~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~ 363 (470)
+.|-|-+||.+ +....+.....|+.++.++=+.+-. ..+.|+.+.+... =.....++
T Consensus 4 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~S--------aHR~p~~~~~~~~-------------~a~~~g~~ 60 (163)
T 3ors_A 4 MKVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVS--------AHRTPKMMVQFAS-------------EARERGIN 60 (163)
T ss_dssp CCEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC--------TTTSHHHHHHHHH-------------HTTTTTCC
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEC--------CcCCHHHHHHHHH-------------HHHhCCCc
Confidence 45666678876 6677888899999998887555533 2456665532110 01111233
Q ss_pred eeecccCch----hhHHhhhcCCceecCCCccch---hhhHHHHHhhhheeE----E-cC--CcccHHHHHHHHHHHhcc
Q 012151 364 GFWTHSGWN----STLESMCEGVPMICQPYLPDQ---MVNARYVSHFWRVGL----H-SE--WKLERMEIERAIRRVMVE 429 (470)
Q Consensus 364 ~~I~HGG~g----s~~eal~~GvP~v~~P~~~DQ---~~na~rv~~~~G~G~----~-l~--~~~~~~~l~~ai~~vl~~ 429 (470)
.+|.=.|.. ++..++ .-+|+|.+|....- .+--.-+.+ +--|+ . ++ ...++.-++..|.. +.|
T Consensus 61 ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vq-mp~GvPVatV~I~~a~~~nAa~lAa~Il~-~~d 137 (163)
T 3ors_A 61 IIIAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQ-MPGGIPVATTAIGAAGAKNAGILAARMLS-IQN 137 (163)
T ss_dssp EEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTSCCEECCSTHHHHHHHHHHHHHHHH-TTC
T ss_pred EEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhh-CCCCCceEEEEcCCcccHHHHHHHHHHHh-CCC
Confidence 377766633 444443 56899999986531 121222333 23332 2 23 13555555555533 345
Q ss_pred chhHHHHHHHHHHHHHHHHHH
Q 012151 430 AEGQEMRARIMHLKEKVDFCL 450 (470)
Q Consensus 430 ~~~~~~~~~a~~l~~~~~~~~ 450 (470)
+.++++.+.+++++++.+
T Consensus 138 ---~~l~~kl~~~r~~~~~~v 155 (163)
T 3ors_A 138 ---PSLVEKLNQYESSLIQKV 155 (163)
T ss_dssp ---THHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHH
Confidence 789999999998888753
No 91
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=61.77 E-value=59 Score=28.22 Aligned_cols=148 Identities=10% Similarity=0.025 Sum_probs=76.8
Q ss_pred hcCCCCCCeEEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhc-CCceeeeccChH
Q 012151 276 WLDKQTPKSVVYISFGSVIAINKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLD-GRGCIVKWAPQQ 354 (470)
Q Consensus 276 ~l~~~~~~~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~p~~ 354 (470)
|++ ..+++++.|..|.+. ..-+..|.+.+..+.++... +.+.+.+-.. .++......-..
T Consensus 26 fl~-L~gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~-----------~~~~l~~l~~~~~i~~i~~~~~~ 86 (223)
T 3dfz_A 26 MLD-LKGRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPT-----------VSAEINEWEAKGQLRVKRKKVGE 86 (223)
T ss_dssp EEC-CTTCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSS-----------CCHHHHHHHHTTSCEEECSCCCG
T ss_pred EEE-cCCCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCC-----------CCHHHHHHHHcCCcEEEECCCCH
Confidence 344 345678888777553 34456666678887665421 2233322222 234444222234
Q ss_pred hhhccCCcceeecccCchhhHHhhh----cCCceecCCCccchhhhHH-----HHHhh-hheeEEcCC--cccHHHHHHH
Q 012151 355 EVLAHPAVGGFWTHSGWNSTLESMC----EGVPMICQPYLPDQMVNAR-----YVSHF-WRVGLHSEW--KLERMEIERA 422 (470)
Q Consensus 355 ~lL~~~~~~~~I~HGG~gs~~eal~----~GvP~v~~P~~~DQ~~na~-----rv~~~-~G~G~~l~~--~~~~~~l~~a 422 (470)
+.|..+++ +|.--|.-.+.+.++ .|+|+-+ .|.+..+. .+.+. +-+|+.-.. ..-+..|++.
T Consensus 87 ~dL~~adL--VIaAT~d~~~N~~I~~~ak~gi~VNv----vD~p~~~~f~~Paiv~rg~l~iaIST~G~sP~la~~iR~~ 160 (223)
T 3dfz_A 87 EDLLNVFF--IVVATNDQAVNKFVKQHIKNDQLVNM----ASSFSDGNIQIPAQFSRGRLSLAISTDGASPLLTKRIKED 160 (223)
T ss_dssp GGSSSCSE--EEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEETTEEEEEECTTSCHHHHHHHHHH
T ss_pred hHhCCCCE--EEECCCCHHHHHHHHHHHhCCCEEEE----eCCcccCeEEEeeEEEeCCEEEEEECCCCCcHHHHHHHHH
Confidence 45655665 888888766655544 4566544 23333321 12221 334444333 2345677777
Q ss_pred HHHHhccchhHHHHHHHHHHHHHHHHH
Q 012151 423 IRRVMVEAEGQEMRARIMHLKEKVDFC 449 (470)
Q Consensus 423 i~~vl~~~~~~~~~~~a~~l~~~~~~~ 449 (470)
|++++-..- ..+-+.+.++++.+++.
T Consensus 161 ie~~lp~~~-~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 161 LSSNYDESY-TQYTQFLYECRVLIHRL 186 (223)
T ss_dssp HHHHSCTHH-HHHHHHHHHHHHHHHHC
T ss_pred HHHHccHHH-HHHHHHHHHHHHHHHHH
Confidence 777775422 35667777777777764
No 92
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=61.45 E-value=66 Score=26.35 Aligned_cols=141 Identities=9% Similarity=0.064 Sum_probs=81.7
Q ss_pred eEEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcc
Q 012151 284 SVVYISFGSVIAINKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVG 363 (470)
Q Consensus 284 ~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~ 363 (470)
+.|-|-+||.+ +.+..+.....|+.++..+=+.+-. ..+.|+.+.+.. .-+....++
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~S--------aHRtp~~l~~~~-------------~~~~~~g~~ 62 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVS--------AHRTPDKMFDYA-------------ETAKERGLK 62 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECC--------TTTCHHHHHHHH-------------HHTTTTTCC
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEc--------CcCCHHHHHHHH-------------HHHHhCCCc
Confidence 45667788886 6677888899999998876555533 234666553211 111112234
Q ss_pred eeecccCch----hhHHhhhcCCceecCCCccc---hhhhHHHHHhhh--heeEEc---CC--cccHHHHHHHHHHHhcc
Q 012151 364 GFWTHSGWN----STLESMCEGVPMICQPYLPD---QMVNARYVSHFW--RVGLHS---EW--KLERMEIERAIRRVMVE 429 (470)
Q Consensus 364 ~~I~HGG~g----s~~eal~~GvP~v~~P~~~D---Q~~na~rv~~~~--G~G~~l---~~--~~~~~~l~~ai~~vl~~ 429 (470)
.+|.=.|.. ++..++ .-+|+|.+|.... -.+--.-..+ + |+|+.. +. ..++.-++..|.. +.|
T Consensus 63 ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vq-mp~gvpVatV~I~~ag~~nAa~lAa~Il~-~~d 139 (166)
T 3oow_A 63 VIIAGAGGAAHLPGMVAAK-TTLPVLGVPVKSSTLNGQDSLLSIVQ-MPAGIPVATFAIGMAGAKNAALFAASILQ-HTD 139 (166)
T ss_dssp EEEEEECSSCCHHHHHHHT-CSSCEEEEECCCTTTTTHHHHHHHHT-CCTTSCCEECCSTHHHHHHHHHHHHHHHG-GGC
T ss_pred EEEEECCcchhhHHHHHhc-cCCCEEEeecCcCCCCCHHHHHHHhc-CCCCCceEEEecCCccchHHHHHHHHHHc-CCC
Confidence 488776643 333333 3689999998543 1121222333 2 333221 21 3455555544433 346
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcC
Q 012151 430 AEGQEMRARIMHLKEKVDFCLRKG 453 (470)
Q Consensus 430 ~~~~~~~~~a~~l~~~~~~~~~~~ 453 (470)
+.++++.+.+++++++.+.+.
T Consensus 140 ---~~l~~kl~~~r~~~~~~v~~~ 160 (166)
T 3oow_A 140 ---INIAKALAEFRAEQTRFVLEN 160 (166)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHTC
T ss_pred ---HHHHHHHHHHHHHHHHHHHhc
Confidence 899999999999998876543
No 93
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=61.09 E-value=31 Score=29.30 Aligned_cols=42 Identities=5% Similarity=-0.050 Sum_probs=34.0
Q ss_pred chHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCccchHHHHhhcCCCeEEEecc
Q 012151 99 IMPFRDCLAEILMKSKADQNKDSSPCCLITDAFWFFTHTVAADFKLPTIVLQTC 152 (470)
Q Consensus 99 ~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~~~~~~vA~~~giP~v~~~~~ 152 (470)
.....+.++++.+ .+.|+||.|. .+..+|+++|+|++.+.+.
T Consensus 128 ~~e~~~~i~~l~~---------~G~~vvVG~~---~~~~~A~~~Gl~~vli~sg 169 (196)
T 2q5c_A 128 EDEITTLISKVKT---------ENIKIVVSGK---TVTDEAIKQGLYGETINSG 169 (196)
T ss_dssp GGGHHHHHHHHHH---------TTCCEEEECH---HHHHHHHHTTCEEEECCCC
T ss_pred HHHHHHHHHHHHH---------CCCeEEECCH---HHHHHHHHcCCcEEEEecC
Confidence 3566778888877 4899999984 4578899999999998874
No 94
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=60.61 E-value=70 Score=26.32 Aligned_cols=137 Identities=12% Similarity=0.088 Sum_probs=79.3
Q ss_pred eEEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcc
Q 012151 284 SVVYISFGSVIAINKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVG 363 (470)
Q Consensus 284 ~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~ 363 (470)
+.|-|-+||.+ +....+.....|+.++.++-+.+-. ..+.|+.+.+. +.. .....++
T Consensus 7 ~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~S--------aHR~p~~~~~~----------~~~---a~~~g~~ 63 (169)
T 3trh_A 7 IFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILS--------AHRTPKETVEF----------VEN---ADNRGCA 63 (169)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC--------TTTSHHHHHHH----------HHH---HHHTTEE
T ss_pred CcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEc--------ccCCHHHHHHH----------HHH---HHhCCCc
Confidence 45667788886 6677888999999999887666533 23466655321 111 0112223
Q ss_pred eeecccCch----hhHHhhhcCCceecCCCccch---hhhHHHHHh--hhheeE--E-cCC--cccHHHHHHHHHHHhcc
Q 012151 364 GFWTHSGWN----STLESMCEGVPMICQPYLPDQ---MVNARYVSH--FWRVGL--H-SEW--KLERMEIERAIRRVMVE 429 (470)
Q Consensus 364 ~~I~HGG~g----s~~eal~~GvP~v~~P~~~DQ---~~na~rv~~--~~G~G~--~-l~~--~~~~~~l~~ai~~vl~~ 429 (470)
.||.=.|.. ++..++ .-+|+|.+|..... .+--.-..+ . |+.+ . ++. ..++.-++..|.. +.|
T Consensus 64 ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~-GvPVatV~I~~a~~~nAa~lAa~Il~-~~d 140 (169)
T 3trh_A 64 VFIAAAGLAAHLAGTIAAH-TLKPVIGVPMAGGSLGGLDALLSTVQMPG-GVPVACTAIGKAGAKNAAILAAQIIA-LQD 140 (169)
T ss_dssp EEEEEECSSCCHHHHHHHT-CSSCEEEEECCCSTTTTHHHHHHHHCCCT-TSCCEECCSTHHHHHHHHHHHHHHHH-TTC
T ss_pred EEEEECChhhhhHHHHHhc-CCCCEEEeecCCCCCCCHHHHHHhhcCCC-CCceEEEecCCccchHHHHHHHHHHc-CCC
Confidence 377776643 333333 36899999986422 121223333 2 4321 1 221 3455555555533 356
Q ss_pred chhHHHHHHHHHHHHHHHHH
Q 012151 430 AEGQEMRARIMHLKEKVDFC 449 (470)
Q Consensus 430 ~~~~~~~~~a~~l~~~~~~~ 449 (470)
+.++++.+.++++.++.
T Consensus 141 ---~~l~~kl~~~r~~~~~~ 157 (169)
T 3trh_A 141 ---KSIAQKLVQQRTAKRET 157 (169)
T ss_dssp ---HHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHH
Confidence 89999999999988875
No 95
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=60.44 E-value=14 Score=31.75 Aligned_cols=44 Identities=18% Similarity=-0.001 Sum_probs=35.3
Q ss_pred CCEEEEEcCCCccChH-HHHHHHHHHHhCCCeEEEEeCCCCCcccc
Q 012151 15 GRRVILFPLPFQGHIN-PMLHLASILYSKGFSVTIIHTDFNFSSTN 59 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~-p~l~La~~L~~rGh~V~~~~~~~~~~~~~ 59 (470)
+.||++.-.++ +..+ -...|.+.|.++|++|.++.++.-...+.
T Consensus 7 ~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i~ 51 (201)
T 3lqk_A 7 GKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQTTDT 51 (201)
T ss_dssp TCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSCCTTC
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHHHHHH
Confidence 45788777777 5555 79999999999999999999976665554
No 96
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=60.30 E-value=61 Score=29.89 Aligned_cols=37 Identities=16% Similarity=0.150 Sum_probs=25.2
Q ss_pred CCCCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 012151 9 RMVPRNGRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTD 52 (470)
Q Consensus 9 ~m~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 52 (470)
.||+ +|||+|+..+.. .....++|.++||+|..+.+.
T Consensus 3 ~m~~--~mrivf~Gt~~f-----a~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 3 AMSQ--SLRIVFAGTPDF-----AARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp ------CCEEEEECCSHH-----HHHHHHHHHTSSSEEEEEECC
T ss_pred cccc--CCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEcC
Confidence 3665 799999977643 345567888899999887774
No 97
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=59.77 E-value=53 Score=31.44 Aligned_cols=34 Identities=9% Similarity=0.028 Sum_probs=23.7
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 012151 14 NGRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTD 52 (470)
Q Consensus 14 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 52 (470)
+..+|++++.+-.. . .+.++.++.|++|+++.+.
T Consensus 4 ~~k~l~Il~~~~~~--~---~i~~aa~~lG~~vv~v~~~ 37 (425)
T 3vot_A 4 RNKNLAIICQNKHL--P---FIFEEAERLGLKVTFFYNS 37 (425)
T ss_dssp CCCEEEEECCCTTC--C---HHHHHHHHTTCEEEEEEET
T ss_pred CCcEEEEECCChhH--H---HHHHHHHHCCCEEEEEECC
Confidence 45688888765432 1 3567778889999998764
No 98
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=58.37 E-value=51 Score=27.42 Aligned_cols=77 Identities=10% Similarity=0.128 Sum_probs=41.3
Q ss_pred eeeccChHh-hhccCCcceeecccCchhhHHh---hhcCCceecCCCccchhhhHHHHHhhhheeEEcCCcccHHHHHHH
Q 012151 347 IVKWAPQQE-VLAHPAVGGFWTHSGWNSTLES---MCEGVPMICQPYLPDQMVNARYVSHFWRVGLHSEWKLERMEIERA 422 (470)
Q Consensus 347 ~~~~~p~~~-lL~~~~~~~~I~HGG~gs~~ea---l~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~a 422 (470)
+++..+... ++..-+-..++--||.||+.|+ +.+++|++++|.+. .....+... -..... ..-+++++.+.
T Consensus 93 ~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~-~~~~i~-~~~~~~e~~~~ 167 (176)
T 2iz6_A 93 VTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSL-DAGLVH-VAADVAGAIAA 167 (176)
T ss_dssp ECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHH-CTTTEE-EESSHHHHHHH
T ss_pred EcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChh-hcCeEE-EcCCHHHHHHH
Confidence 344445333 4333232346667899986654 77999999999842 111122221 111111 12467777777
Q ss_pred HHHHhc
Q 012151 423 IRRVMV 428 (470)
Q Consensus 423 i~~vl~ 428 (470)
+.+.+.
T Consensus 168 l~~~~~ 173 (176)
T 2iz6_A 168 VKQLLA 173 (176)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 766554
No 99
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=57.22 E-value=14 Score=29.35 Aligned_cols=38 Identities=18% Similarity=0.123 Sum_probs=34.1
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTD 52 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 52 (470)
+.+|++.+.++-+|-....-++..|..+|++|.+....
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~ 40 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVL 40 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCC
Confidence 35899999999999999999999999999999987764
No 100
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=56.83 E-value=10 Score=31.90 Aligned_cols=43 Identities=14% Similarity=0.043 Sum_probs=33.7
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCccccc
Q 012151 17 RVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTNY 60 (470)
Q Consensus 17 ~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~ 60 (470)
||++.-.++.|=+ =...|.+.|.++|++|.++.++.-.+.+..
T Consensus 4 ~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~ 46 (181)
T 1g63_A 4 KLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFINT 46 (181)
T ss_dssp CEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTSCG
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHHHH
Confidence 6777777775544 678999999999999999999766655543
No 101
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=56.40 E-value=6.1 Score=35.77 Aligned_cols=52 Identities=8% Similarity=-0.002 Sum_probs=36.2
Q ss_pred cceeecccCchhhHHhhhc------CCceecCCCccchhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhcc
Q 012151 362 VGGFWTHSGWNSTLESMCE------GVPMICQPYLPDQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVE 429 (470)
Q Consensus 362 ~~~~I~HGG~gs~~eal~~------GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~ 429 (470)
++++|.=||=||+.+++.. ++|++++|... +| -+. .+.++++.+++++++++
T Consensus 36 ~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G~------------lg---fl~-~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 36 PEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTGH------------LG---FYA-DWRPAEADKLVKLLAKG 93 (272)
T ss_dssp CSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEESSS------------CC---SSC-CBCGGGHHHHHHHHHTT
T ss_pred CCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCCC------------CC---cCC-cCCHHHHHHHHHHHHcC
Confidence 3449999999999999764 89999987521 12 111 34567777778777764
No 102
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=56.30 E-value=85 Score=28.45 Aligned_cols=39 Identities=18% Similarity=0.270 Sum_probs=30.5
Q ss_pred CEEEEEcC--CCccChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012151 16 RRVILFPL--PFQGHINPMLHLASILYSKGFSVTIIHTDFN 54 (470)
Q Consensus 16 ~~il~~~~--~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~ 54 (470)
+++++++. ++-|-..-...||..|+++|.+|.++-.+..
T Consensus 104 ~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~r 144 (299)
T 3cio_A 104 NNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADLR 144 (299)
T ss_dssp CCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 34444443 5669999999999999999999999987643
No 103
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=56.22 E-value=80 Score=25.63 Aligned_cols=132 Identities=14% Similarity=0.142 Sum_probs=76.6
Q ss_pred EEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCccee
Q 012151 286 VYISFGSVIAINKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGF 365 (470)
Q Consensus 286 I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~ 365 (470)
|-|-+||.+ +....+.....|+.++.++=+.+-+ ..+.|+.+.+... . . +.++ +
T Consensus 2 V~Iimgs~S--D~~v~~~a~~~l~~~gi~~dv~V~s--------aHR~p~~~~~~~~----------~---a-~~~V--i 55 (157)
T 2ywx_A 2 ICIIMGSES--DLKIAEKAVNILKEFGVEFEVRVAS--------AHRTPELVEEIVK----------N---S-KADV--F 55 (157)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC--------TTTCHHHHHHHHH----------H---C-CCSE--E
T ss_pred EEEEEccHH--HHHHHHHHHHHHHHcCCCeEEEEEc--------ccCCHHHHHHHHH----------h---c-CCCE--E
Confidence 345567776 6677888899999998876555533 3456766532211 0 0 1134 6
Q ss_pred ecccCch----hhHHhhhcCCceecCCCccc-hhhhH-HHHHhhh--heeE--Ec-CCcccHHHHHHHHHHHhccchhHH
Q 012151 366 WTHSGWN----STLESMCEGVPMICQPYLPD-QMVNA-RYVSHFW--RVGL--HS-EWKLERMEIERAIRRVMVEAEGQE 434 (470)
Q Consensus 366 I~HGG~g----s~~eal~~GvP~v~~P~~~D-Q~~na-~rv~~~~--G~G~--~l-~~~~~~~~l~~ai~~vl~~~~~~~ 434 (470)
|.=.|.. ++..++ .-+|+|.+|.... ....+ .-+.+ + |+.+ .- +...++.-++..|. -+.| +.
T Consensus 56 Ia~AG~aa~Lpgvva~~-t~~PVIgVP~~~~l~G~daLlS~vq-mP~gvpVatV~I~~~~nAa~lA~~Il-~~~d---~~ 129 (157)
T 2ywx_A 56 IAIAGLAAHLPGVVASL-TTKPVIAVPVDAKLDGLDALLSSVQ-MPPGIPVATVGIDRGENAAILALEIL-ALKD---EN 129 (157)
T ss_dssp EEEEESSCCHHHHHHTT-CSSCEEEEEECSSGGGHHHHHHHHS-CCTTSCCEECCTTCHHHHHHHHHHHH-TTTC---HH
T ss_pred EEEcCchhhhHHHHHhc-cCCCEEEecCCCccCcHHHHHHHhc-CCCCCeeEEEecCCcHHHHHHHHHHH-hcCC---HH
Confidence 6665533 333333 4689999998322 11111 22334 2 4332 21 22566666666554 3456 88
Q ss_pred HHHHHHHHHHHHHHH
Q 012151 435 MRARIMHLKEKVDFC 449 (470)
Q Consensus 435 ~~~~a~~l~~~~~~~ 449 (470)
.+++.+.++++.++.
T Consensus 130 l~~kl~~~r~~~~~~ 144 (157)
T 2ywx_A 130 IAKKLIEYREKMKKK 144 (157)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999988875
No 104
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=55.76 E-value=13 Score=30.13 Aligned_cols=42 Identities=19% Similarity=0.441 Sum_probs=25.7
Q ss_pred CCCCCCCC-CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 012151 6 DSCRMVPR-NGRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTD 52 (470)
Q Consensus 6 ~~~~m~~~-~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 52 (470)
++..|... ..++|+++-. |.+- ..+|+.|.++|++|+++...
T Consensus 9 ~~~~~~~~~~~~~v~IiG~---G~iG--~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 9 HHHHMSKKQKSKYIVIFGC---GRLG--SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp --------CCCCEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred hhhhhhcccCCCcEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 34456543 4578998854 4333 56789999999999998764
No 105
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=55.58 E-value=67 Score=29.53 Aligned_cols=34 Identities=24% Similarity=0.222 Sum_probs=24.7
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 012151 14 NGRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTD 52 (470)
Q Consensus 14 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 52 (470)
++|||+|+..+.. .....+.|.+.||+|..+.+.
T Consensus 2 ~~mrIvf~Gt~~f-----a~~~L~~L~~~~~~i~~Vvt~ 35 (314)
T 1fmt_A 2 ESLRIIFAGTPDF-----AARHLDALLSSGHNVVGVFTQ 35 (314)
T ss_dssp CCCEEEEEECSHH-----HHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEeC
Confidence 4689999987653 244557777789999877764
No 106
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=55.38 E-value=28 Score=32.38 Aligned_cols=104 Identities=9% Similarity=0.066 Sum_probs=54.3
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCc----ccccccCCCCCeeEEecCCCCCCCcccccCHHHH
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFS----STNYFSCNYPHFDFHSFPDGFSETEASVEDVAVF 90 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~----~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~ 90 (470)
+|||+|+. --+-...+.++|.++||+|..+.+...+. .+.. -+...|+.+..... +...
T Consensus 22 ~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~-~A~~~gIpv~~~~~-~~~~---------- 84 (329)
T 2bw0_A 22 SMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGL-EAEKDGVPVFKYSR-WRAK---------- 84 (329)
T ss_dssp CCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHH-HHHHHTCCEEECSC-CEET----------
T ss_pred CCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHH-HHHHcCCCEEecCc-cccc----------
Confidence 48999992 22334456788999999998766522111 0000 00113555544431 1000
Q ss_pred HHHHHhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCc-cchHHHHhhcCCCeEEEecc
Q 012151 91 FTAINGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFW-FFTHTVAADFKLPTIVLQTC 152 (470)
Q Consensus 91 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~-~~~~~vA~~~giP~v~~~~~ 152 (470)
....+ ++++.+.+ .+||++|+-.+. .....+-......++=+.++
T Consensus 85 -----~~~~~---~~~~~l~~---------~~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpS 130 (329)
T 2bw0_A 85 -----GQALP---DVVAKYQA---------LGAELNVLPFCSQFIPMEIISAPRHGSIIYHPS 130 (329)
T ss_dssp -----TEECH---HHHHHHHT---------TCCSEEEESSCSSCCCHHHHTCSTTCEEEEESS
T ss_pred -----ccccH---HHHHHHHh---------cCCCEEEEeehhhhCCHHHHhhCcCCEEEEcCC
Confidence 00112 23333333 489999987654 44555555566677777766
No 107
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=55.36 E-value=15 Score=31.40 Aligned_cols=43 Identities=9% Similarity=0.056 Sum_probs=33.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEeCCCCCcccc
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSK-GFSVTIIHTDFNFSSTN 59 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~V~~~~~~~~~~~~~ 59 (470)
|||++.-.++.|-+. ...|.+.|.++ |++|.++.++.-...+.
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~ 44 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIE 44 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhH
Confidence 467777777766555 99999999999 99999999865555444
No 108
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=55.31 E-value=17 Score=31.40 Aligned_cols=45 Identities=16% Similarity=0.070 Sum_probs=36.5
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCccccc
Q 012151 14 NGRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTNY 60 (470)
Q Consensus 14 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~ 60 (470)
++.||++.-.++.+-+. ...|.+.|.++| +|.++.++.-.+.+..
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv~~ 62 (209)
T 1mvl_A 18 RKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFLDK 62 (209)
T ss_dssp -CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTCCG
T ss_pred CCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhcCH
Confidence 35688888888877665 899999999999 9999999776666654
No 109
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=55.28 E-value=63 Score=31.06 Aligned_cols=138 Identities=14% Similarity=0.075 Sum_probs=79.0
Q ss_pred CeEEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccC-C
Q 012151 283 KSVVYISFGSVIAINKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHP-A 361 (470)
Q Consensus 283 ~~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~-~ 361 (470)
.+.|-|-+||.+ +....+.....|+.++.++=+.+.+ .++.|+.+.+.. .+.+- ... .
T Consensus 265 ~~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~s--------aHR~p~~~~~~~----------~~~~~-~g~~~ 323 (425)
T 2h31_A 265 QCRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTS--------AHKGPDETLRIK----------AEYEG-DGIPT 323 (425)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC--------TTTCHHHHHHHH----------HHHHT-TCCCE
T ss_pred CCeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeee--------ccCCHHHHHHHH----------HHHHH-CCCCe
Confidence 456777788886 6677888899999999886555533 345666543211 11000 012 2
Q ss_pred cceeecccCc----hhhHHhhhcCCceecCCCccchhhhHHH--HHh--hhheeEEcC-CcccHHHHHHHHHHHhccchh
Q 012151 362 VGGFWTHSGW----NSTLESMCEGVPMICQPYLPDQMVNARY--VSH--FWRVGLHSE-WKLERMEIERAIRRVMVEAEG 432 (470)
Q Consensus 362 ~~~~I~HGG~----gs~~eal~~GvP~v~~P~~~DQ~~na~r--v~~--~~G~G~~l~-~~~~~~~l~~ai~~vl~~~~~ 432 (470)
| +|.=+|. .++..++ .-+|+|++|....-...... +.+ . |+.+..- ...++.-++..|. -+.|
T Consensus 324 v--iIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~G~daLls~vqmp~-g~pvatv~~~~nAa~~A~~Il-~~~~--- 395 (425)
T 2h31_A 324 V--FVAVAGRSNGLGPVMSGN-TAYPVISCPPLTPDWGVQDVWSSLRLPS-GLGCSTVLSPEGSAQFAAQIF-GLSN--- 395 (425)
T ss_dssp E--EEEECCSSCCHHHHHHHH-CSSCEEECCCCCTTTHHHHGGGTSSCCS-SCCCEECCCHHHHHHHHHHHH-HTTC---
T ss_pred E--EEEEcCcccchHhHHhcc-CCCCEEEeeCccccccHHHHHHHhcCCC-CCceEEecCchHHHHHHHHHH-ccCC---
Confidence 4 6666653 2455454 47899999985321111122 222 1 3332221 1356666666664 3456
Q ss_pred HHHHHHHHHHHHHHHHH
Q 012151 433 QEMRARIMHLKEKVDFC 449 (470)
Q Consensus 433 ~~~~~~a~~l~~~~~~~ 449 (470)
+..+++.+..+......
T Consensus 396 ~~l~~kl~~~~~~~~~~ 412 (425)
T 2h31_A 396 HLVWSKLRASILNTWIS 412 (425)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 78888888888877764
No 110
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=55.06 E-value=9.8 Score=31.31 Aligned_cols=39 Identities=21% Similarity=0.262 Sum_probs=35.3
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 012151 14 NGRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTD 52 (470)
Q Consensus 14 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 52 (470)
++.+|++.+.++-.|-....-++..|...|++|.+....
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~ 55 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLR 55 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSB
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 467999999999999999999999999999999998754
No 111
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=54.67 E-value=22 Score=33.38 Aligned_cols=40 Identities=18% Similarity=0.015 Sum_probs=32.5
Q ss_pred CCEEEEEcC-CCccChHHHHHHHHHHH--hCCCeEEEEeCCCC
Q 012151 15 GRRVILFPL-PFQGHINPMLHLASILY--SKGFSVTIIHTDFN 54 (470)
Q Consensus 15 ~~~il~~~~-~~~GH~~p~l~La~~L~--~rGh~V~~~~~~~~ 54 (470)
+++|++++. ++-|-..-...||..|+ ++|++|.++..+..
T Consensus 17 ~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~~ 59 (348)
T 3io3_A 17 SLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPA 59 (348)
T ss_dssp TCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSS
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 445666654 56699999999999999 89999999999743
No 112
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=53.84 E-value=15 Score=31.65 Aligned_cols=38 Identities=24% Similarity=0.134 Sum_probs=35.2
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTD 52 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 52 (470)
+.+|++.+.++-.|-....-++..|..+|++|.++...
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~ 125 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVD 125 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSS
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 56899999999999999999999999999999998864
No 113
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=53.77 E-value=19 Score=32.24 Aligned_cols=40 Identities=15% Similarity=0.100 Sum_probs=36.2
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 012151 14 NGRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDF 53 (470)
Q Consensus 14 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~ 53 (470)
++.+|++.+.++-.|-....-++..|..+|++|.++....
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~v 161 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDV 161 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEEC
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCC
Confidence 4568999999999999999999999999999999987643
No 114
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=53.75 E-value=77 Score=27.58 Aligned_cols=107 Identities=7% Similarity=-0.033 Sum_probs=58.1
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCCcccccccCCCCCeeEEecCC-CCCCCcccccCHHHHH
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSK--GFSVTIIHTDFNFSSTNYFSCNYPHFDFHSFPD-GFSETEASVEDVAVFF 91 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~V~~~~~~~~~~~~~~~~~~~~gi~~~~~~~-~~~~~~~~~~~~~~~~ 91 (470)
.+||+|+.+++ |+ -+.++.+.|.+. +++|..+.+........+ -+...|+.+..++. .+. +-
T Consensus 22 ~~rI~~l~SG~-g~--~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~-~A~~~gIp~~~~~~~~~~-------~r---- 86 (229)
T 3auf_A 22 MIRIGVLISGS-GT--NLQAILDGCREGRIPGRVAVVISDRADAYGLE-RARRAGVDALHMDPAAYP-------SR---- 86 (229)
T ss_dssp CEEEEEEESSC-CH--HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHH-HHHHTTCEEEECCGGGSS-------SH----
T ss_pred CcEEEEEEeCC-cH--HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHH-HHHHcCCCEEEECccccc-------ch----
Confidence 46899998777 43 367777888776 688877665422111100 00226788776541 110 00
Q ss_pred HHHHhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCc-cchHHHHhhcCCCeEEEecc
Q 012151 92 TAINGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFW-FFTHTVAADFKLPTIVLQTC 152 (470)
Q Consensus 92 ~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~-~~~~~vA~~~giP~v~~~~~ 152 (470)
....+.+.+.+++ .+||+||.-.+. .....+-..+...++=+.++
T Consensus 87 ----~~~~~~~~~~l~~------------~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 87 ----TAFDAALAERLQA------------YGVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp ----HHHHHHHHHHHHH------------TTCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred ----hhccHHHHHHHHh------------cCCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 0111222233333 389999987654 44555555666667766544
No 115
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=52.28 E-value=15 Score=31.55 Aligned_cols=41 Identities=15% Similarity=-0.008 Sum_probs=30.2
Q ss_pred CCEEEEEcCCCccChHH-HHHHHHHHHhCCCeEEEEeCCCCCc
Q 012151 15 GRRVILFPLPFQGHINP-MLHLASILYSKGFSVTIIHTDFNFS 56 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p-~l~La~~L~~rGh~V~~~~~~~~~~ 56 (470)
+.||++.-.++ +..+- ...|.+.|.++|++|.++.++.-..
T Consensus 5 ~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~~ 46 (207)
T 3mcu_A 5 GKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQS 46 (207)
T ss_dssp TCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC----
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHHH
Confidence 34777776666 55665 8999999999999999999965543
No 116
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=52.07 E-value=39 Score=31.44 Aligned_cols=41 Identities=24% Similarity=0.064 Sum_probs=32.6
Q ss_pred CCEEEEEcC-CCccChHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 012151 15 GRRVILFPL-PFQGHINPMLHLASILYSKGFSVTIIHTDFNF 55 (470)
Q Consensus 15 ~~~il~~~~-~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~ 55 (470)
.++|+|++. ++-|-..-...||..|+++|++|.++..+...
T Consensus 15 ~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~~ 56 (334)
T 3iqw_A 15 SLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAH 56 (334)
T ss_dssp TCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSSC
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCCC
Confidence 345555554 56699999999999999999999999987443
No 117
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=52.02 E-value=42 Score=28.98 Aligned_cols=106 Identities=10% Similarity=0.115 Sum_probs=56.0
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCC--eEEEEeCCCCCcccccccCCCCCeeEEecCCC-CCCCcccccCHHHHHH
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGF--SVTIIHTDFNFSSTNYFSCNYPHFDFHSFPDG-FSETEASVEDVAVFFT 92 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh--~V~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~-~~~~~~~~~~~~~~~~ 92 (470)
+||+|+..++ |+ -+.++.+.|.+.+| +|..+.+........+ -+...|+.+..++.. +. +
T Consensus 2 ~rI~vl~SG~-g~--~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~-~A~~~gIp~~~~~~~~~~-------~------ 64 (216)
T 2ywr_A 2 LKIGVLVSGR-GS--NLQAIIDAIESGKVNASIELVISDNPKAYAIE-RCKKHNVECKVIQRKEFP-------S------ 64 (216)
T ss_dssp EEEEEEECSC-CH--HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHH-HHHHHTCCEEECCGGGSS-------S------
T ss_pred CEEEEEEeCC-cH--HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHH-HHHHcCCCEEEeCccccc-------c------
Confidence 3788887766 32 36777888888888 7766555322111110 001257777655311 10 1
Q ss_pred HHHhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCc-cchHHHHhhcCCCeEEEecc
Q 012151 93 AINGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFW-FFTHTVAADFKLPTIVLQTC 152 (470)
Q Consensus 93 ~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~-~~~~~vA~~~giP~v~~~~~ 152 (470)
.....+.+.+.+++ .+||++|.-.+. .-...+-..+...++=+.++
T Consensus 65 --r~~~~~~~~~~l~~------------~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 65 --KKEFEERMALELKK------------KGVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp --HHHHHHHHHHHHHH------------TTCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred --hhhhhHHHHHHHHh------------cCCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 00111222233333 389999987654 44555555666667766554
No 118
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=50.75 E-value=97 Score=30.17 Aligned_cols=87 Identities=11% Similarity=0.072 Sum_probs=52.6
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccCCCCCeeEEecCCCCCCCcccccCHHHHHHHH
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTNYFSCNYPHFDFHSFPDGFSETEASVEDVAVFFTAI 94 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (470)
..|++++.- -.-.+.|++.|.+-|.+|..+.+........+ .. .+.....|..
T Consensus 313 Gkrv~i~~~-----~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~-----~~-----------~~~v~~~D~~------ 365 (458)
T 3pdi_B 313 SARTAIAAD-----PDLLLGFDALLRSMGAHTVAAVVPARAAALVD-----SP-----------LPSVRVGDLE------ 365 (458)
T ss_dssp TCEEEEECC-----HHHHHHHHHHHHTTTCEEEEEEESSCCSCCTT-----TT-----------SSCEEESHHH------
T ss_pred CCEEEEECC-----cHHHHHHHHHHHHCCCEEEEEEECCCChhhhh-----Cc-----------cCcEEeCCHH------
Confidence 357777533 23457888899889999998887543222221 00 0000000111
Q ss_pred HhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCccchHHHHhhcCCCeEEE
Q 012151 95 NGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFWFFTHTVAADFKLPTIVL 149 (470)
Q Consensus 95 ~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~~~~~~vA~~~giP~v~~ 149 (470)
.+++.+++. +||++|.+. ....+|+++|||++.+
T Consensus 366 ------~le~~i~~~------------~pDllig~~---~~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 366 ------DLEHAARAG------------QAQLVIGNS---HALASARRLGVPLLRA 399 (458)
T ss_dssp ------HHHHHHHHH------------TCSEEEECT---THHHHHHHTTCCEEEC
T ss_pred ------HHHHHHHhc------------CCCEEEECh---hHHHHHHHcCCCEEEe
Confidence 233444443 899999985 3577899999999975
No 119
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=50.27 E-value=41 Score=26.46 Aligned_cols=62 Identities=13% Similarity=-0.016 Sum_probs=40.0
Q ss_pred cCCceecCCCccchhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhccchhHHHHHHHHHHHHHH
Q 012151 380 EGVPMICQPYLPDQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVEAEGQEMRARIMHLKEKV 446 (470)
Q Consensus 380 ~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~ 446 (470)
..+|+|++--..+. .......+ .|+--.+.+.++.++|..+|++++.. ..++...+++++..
T Consensus 74 ~~~pii~ls~~~~~-~~~~~~~~-~g~~~~l~kP~~~~~L~~~i~~~~~~---~~~~~~~~~~~~~~ 135 (155)
T 1qkk_A 74 PDLPMILVTGHGDI-PMAVQAIQ-DGAYDFIAKPFAADRLVQSARRAEEK---RRLVMENRSLRRAA 135 (155)
T ss_dssp TTSCEEEEECGGGH-HHHHHHHH-TTCCEEEESSCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCh-HHHHHHHh-cCCCeEEeCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
Confidence 47888887655443 34444555 37655665568999999999999986 44444444444433
No 120
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=49.71 E-value=25 Score=34.27 Aligned_cols=41 Identities=20% Similarity=0.160 Sum_probs=33.7
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHh-CCCeEEEEeCCCCCc
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYS-KGFSVTIIHTDFNFS 56 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~-rGh~V~~~~~~~~~~ 56 (470)
--+++...|+.|-..-++.+|...+. .|..|.+++.+....
T Consensus 201 ~l~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~ 242 (444)
T 2q6t_A 201 SLNIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAA 242 (444)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHH
Confidence 35777888888999999999999886 489999999875443
No 121
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=48.14 E-value=34 Score=29.36 Aligned_cols=45 Identities=9% Similarity=-0.100 Sum_probs=33.3
Q ss_pred hhhhcCCCCCCeEEEEEcCcccccCHHHHHHHHHHHHhCCCCEEE
Q 012151 273 SISWLDKQTPKSVVYISFGSVIAINKDGFLEIAWGVANSRMPFLW 317 (470)
Q Consensus 273 l~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~ 317 (470)
+.+|+.....+.++||..+|......+.+..+.+|++.++..+.+
T Consensus 18 ~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~ 62 (206)
T 3l4e_A 18 FTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEE 62 (206)
T ss_dssp HHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEE
Confidence 455664444577999998877545566788899999999987544
No 122
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=47.86 E-value=62 Score=30.16 Aligned_cols=38 Identities=26% Similarity=0.240 Sum_probs=31.4
Q ss_pred EEEEEcC-CCccChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012151 17 RVILFPL-PFQGHINPMLHLASILYSKGFSVTIIHTDFN 54 (470)
Q Consensus 17 ~il~~~~-~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~ 54 (470)
+|+|++. ++-|-..-...||..|+++|++|.++..+..
T Consensus 27 ~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 27 KYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA 65 (349)
T ss_dssp EEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 4555544 5669999999999999999999999998764
No 123
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=47.63 E-value=19 Score=25.26 Aligned_cols=49 Identities=12% Similarity=0.092 Sum_probs=33.1
Q ss_pred hcCCceecCCCccchhhhH-HHHHhhhheeEEcCC--cccHHHHHHHHHHHhc
Q 012151 379 CEGVPMICQPYLPDQMVNA-RYVSHFWRVGLHSEW--KLERMEIERAIRRVMV 428 (470)
Q Consensus 379 ~~GvP~v~~P~~~DQ~~na-~rv~~~~G~G~~l~~--~~~~~~l~~ai~~vl~ 428 (470)
-.|+|+|++--.+.|.+-- ..-+.+ .-|+..+- ..++++|.+.+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneak-kegvsydvlkstdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAK-KEGVSYDVLKSTDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHH-HHTCEEEEEECCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHH-hcCcchhhhccCCHHHHHHHHHHHHH
Confidence 3688888887777776543 333332 45555543 6789999999988775
No 124
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=47.37 E-value=88 Score=28.18 Aligned_cols=39 Identities=21% Similarity=0.271 Sum_probs=30.2
Q ss_pred EEEEEc--CCCccChHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 012151 17 RVILFP--LPFQGHINPMLHLASILYSKGFSVTIIHTDFNF 55 (470)
Q Consensus 17 ~il~~~--~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~ 55 (470)
++++++ -++-|-..-...||..|++.|.+|.++-.+...
T Consensus 93 kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~~ 133 (286)
T 3la6_A 93 NVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDMRK 133 (286)
T ss_dssp CEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCTTT
T ss_pred eEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccCCC
Confidence 444443 346689999999999999999999999876543
No 125
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=47.22 E-value=24 Score=30.82 Aligned_cols=39 Identities=23% Similarity=0.174 Sum_probs=34.9
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDF 53 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~ 53 (470)
+++|++..-|+-|-..-++.+|..|.++|++|.++..+.
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 468999999999999999999999999999998877754
No 126
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=46.94 E-value=54 Score=28.70 Aligned_cols=26 Identities=31% Similarity=0.482 Sum_probs=21.1
Q ss_pred ccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 012151 26 QGHINPMLHLASILYSKGFSVTIIHTDF 53 (470)
Q Consensus 26 ~GH~~p~l~La~~L~~rGh~V~~~~~~~ 53 (470)
.|.+ -.++|++|.++|++|+++..+.
T Consensus 28 SG~m--G~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGHL--GKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCHH--HHHHHHHHHHTTCEEEEEECTT
T ss_pred CCHH--HHHHHHHHHHCCCEEEEEeCCc
Confidence 4543 4678999999999999998764
No 127
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=46.87 E-value=16 Score=29.38 Aligned_cols=32 Identities=19% Similarity=0.212 Sum_probs=25.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTD 52 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 52 (470)
.+|+++-+ |++- ..+++.|.++||+|+++...
T Consensus 4 ~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 4 DHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp SCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 47888743 5444 78899999999999999874
No 128
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=46.76 E-value=22 Score=31.01 Aligned_cols=29 Identities=17% Similarity=0.066 Sum_probs=24.0
Q ss_pred cceeecccCchhhHHhhhcCCceecCCCcc
Q 012151 362 VGGFWTHSGWNSTLESMCEGVPMICQPYLP 391 (470)
Q Consensus 362 ~~~~I~HGG~gs~~eal~~GvP~v~~P~~~ 391 (470)
++.+|+.||.......- .++|+|-++..+
T Consensus 64 ~dVIISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 64 CDAIIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CeEEEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 34499999999988875 579999999854
No 129
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=46.17 E-value=35 Score=26.84 Aligned_cols=43 Identities=12% Similarity=0.043 Sum_probs=31.4
Q ss_pred CEEEEEcCCC---ccChHHHHHHHHHHHhCCCeEEEEeCCCCCccc
Q 012151 16 RRVILFPLPF---QGHINPMLHLASILYSKGFSVTIIHTDFNFSST 58 (470)
Q Consensus 16 ~~il~~~~~~---~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~ 58 (470)
.+++|+...+ .......+.+|...++.||+|+++.+..-....
T Consensus 16 ~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~~l 61 (134)
T 3mc3_A 16 XXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPXLL 61 (134)
T ss_dssp CEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGGGG
T ss_pred ceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHHHH
Confidence 3566555544 457788999999999999999998885444443
No 130
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=45.39 E-value=1.1e+02 Score=26.82 Aligned_cols=94 Identities=7% Similarity=-0.105 Sum_probs=53.1
Q ss_pred CEEEEEcCCCccCh-HHHHHHHHHHHhCCCeEEEEeCCCCCcccccccCCCCCeeEEecCCCCCCCcccccCHHHHHHHH
Q 012151 16 RRVILFPLPFQGHI-NPMLHLASILYSKGFSVTIIHTDFNFSSTNYFSCNYPHFDFHSFPDGFSETEASVEDVAVFFTAI 94 (470)
Q Consensus 16 ~~il~~~~~~~GH~-~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (470)
|||+++-.-+.-++ ..+...++.+..-|.+|.+++.+.....++ +..+..
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~~~gp~~i~--------------------------~~~d~~--- 52 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCPRAGVPSIE--------------------------GHFDEA--- 52 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECCSSSCSSCC--------------------------SHHHHH---
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeCCCCchhhc--------------------------ChhHHH---
Confidence 57888877766555 466667787766678888777642222111 111111
Q ss_pred HhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCccch-HHHHhhcCCCeEEE
Q 012151 95 NGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFWFFT-HTVAADFKLPTIVL 149 (470)
Q Consensus 95 ~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~~~~-~~vA~~~giP~v~~ 149 (470)
.....+.+.++++.. .++|+|+.-.....+ ..+.+.+++|++.+
T Consensus 53 --~a~~~l~~~~~~l~~---------~g~d~iviaCnt~~~l~~lr~~~~iPvigi 97 (245)
T 3qvl_A 53 --IAAVGVLEQIRAGRE---------QGVDGHVIASFGDPGLLAARELAQGPVIGI 97 (245)
T ss_dssp --HHHHHHHHHHHHHHH---------HTCSEEEEC-CCCTTHHHHHHHCSSCEEEH
T ss_pred --HHHHHHHHHHHHHHH---------CCCCEEEEeCCChhHHHHHHHHcCCCEECc
Confidence 111222333334333 289999988766433 45556789999874
No 131
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=44.52 E-value=13 Score=33.35 Aligned_cols=51 Identities=18% Similarity=0.144 Sum_probs=36.8
Q ss_pred ceeecccCchhhHHhhhc---CCceecCCCccchhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhcc
Q 012151 363 GGFWTHSGWNSTLESMCE---GVPMICQPYLPDQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVE 429 (470)
Q Consensus 363 ~~~I~HGG~gs~~eal~~---GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~ 429 (470)
+++|+-||=||+.+++.. ++|+++++.. . + |-.. .+.++++.+++++++++
T Consensus 43 D~vv~~GGDGTll~~a~~~~~~~PilGIn~G-----------~-~--Gfl~--~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 43 DLIVVVGGDGTVLKAAKKAADGTPMVGFKAG-----------R-L--GFLT--SYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp SEEEEEECHHHHHHHHTTBCTTCEEEEEESS-----------S-C--CSSC--CBCGGGHHHHHHHHHTT
T ss_pred CEEEEEeCcHHHHHHHHHhCCCCCEEEEECC-----------C-C--CccC--cCCHHHHHHHHHHHHcC
Confidence 349999999999999876 8898887632 1 1 2111 35678888888888765
No 132
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=43.48 E-value=28 Score=30.11 Aligned_cols=41 Identities=17% Similarity=0.105 Sum_probs=36.3
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012151 14 NGRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFN 54 (470)
Q Consensus 14 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~ 54 (470)
++.+|++.+.++-.|-....-++..|..+|++|.+....-.
T Consensus 91 ~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp 131 (215)
T 3ezx_A 91 EAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVL 131 (215)
T ss_dssp -CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCC
T ss_pred CCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCC
Confidence 35799999999999999999999999999999999877533
No 133
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=43.17 E-value=21 Score=30.73 Aligned_cols=45 Identities=16% Similarity=0.024 Sum_probs=34.0
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHh-CCCeEEEEeCCCCCccccc
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYS-KGFSVTIIHTDFNFSSTNY 60 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~-rGh~V~~~~~~~~~~~~~~ 60 (470)
+.||++...++.+ ..-...|.+.|.+ +|++|.++.++.-.+.+..
T Consensus 19 ~k~IllgvTGsia-a~k~~~lv~~L~~~~g~~V~vv~T~~A~~fi~~ 64 (206)
T 1qzu_A 19 KFHVLVGVTGSVA-ALKLPLLVSKLLDIPGLEVAVVTTERAKHFYSP 64 (206)
T ss_dssp SEEEEEEECSSGG-GGTHHHHHHHHC---CEEEEEEECTGGGGSSCG
T ss_pred CCEEEEEEeChHH-HHHHHHHHHHHhcccCCEEEEEECHhHHHHhCH
Confidence 4578888888766 4456999999998 8999999999876666654
No 134
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=42.19 E-value=35 Score=32.38 Aligned_cols=35 Identities=17% Similarity=0.093 Sum_probs=29.3
Q ss_pred EEEEEcCC-CccChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 17 RVILFPLP-FQGHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 17 ~il~~~~~-~~GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
+|++++.- +-|-..-...||..|+++|++|.++..
T Consensus 3 ~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 3 LILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp EEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred EEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 46666554 448999999999999999999999988
No 135
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=42.19 E-value=19 Score=33.49 Aligned_cols=37 Identities=19% Similarity=0.165 Sum_probs=26.2
Q ss_pred CCCCCCCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 6 DSCRMVPRNGRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 6 ~~~~m~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
||+.|.. +|.|+-.+..| ..+|..|.+.||+|+++..
T Consensus 9 ~~~~~~~----kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r 45 (335)
T 1z82_A 9 HHHHMEM----RFFVLGAGSWG-----TVFAQMLHENGEEVILWAR 45 (335)
T ss_dssp -----CC----EEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cccccCC----cEEEECcCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 3444555 89999777655 5788999999999998765
No 136
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=41.76 E-value=2.1e+02 Score=26.22 Aligned_cols=34 Identities=18% Similarity=0.186 Sum_probs=25.3
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDF 53 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~ 53 (470)
.|||+|+-.+.++ ....+.|.++||+|..+.+..
T Consensus 4 mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~p 37 (317)
T 3rfo_A 4 MIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQP 37 (317)
T ss_dssp TSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECCC
T ss_pred ceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeCC
Confidence 4689999888654 344577888899999887743
No 137
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=41.08 E-value=1.1e+02 Score=26.31 Aligned_cols=105 Identities=8% Similarity=0.043 Sum_probs=56.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCCcccccccCCCCCeeEEecCC-CCCCCcccccCHHHHHHH
Q 012151 17 RVILFPLPFQGHINPMLHLASILYSK--GFSVTIIHTDFNFSSTNYFSCNYPHFDFHSFPD-GFSETEASVEDVAVFFTA 93 (470)
Q Consensus 17 ~il~~~~~~~GH~~p~l~La~~L~~r--Gh~V~~~~~~~~~~~~~~~~~~~~gi~~~~~~~-~~~~~~~~~~~~~~~~~~ 93 (470)
||+++-+++ |+ -+.++.+.|.+. +|+|..+.+......+.+ -+...|+.+..++. .+. +-
T Consensus 5 ki~vl~sG~-g~--~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~-~A~~~gIp~~~~~~~~~~-------~~------ 67 (212)
T 3av3_A 5 RLAVFASGS-GT--NFQAIVDAAKRGDLPARVALLVCDRPGAKVIE-RAARENVPAFVFSPKDYP-------SK------ 67 (212)
T ss_dssp EEEEECCSS-CH--HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHH-HHHHTTCCEEECCGGGSS-------SH------
T ss_pred EEEEEEECC-cH--HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHH-HHHHcCCCEEEeCccccc-------ch------
Confidence 688887776 44 366777888776 689987776422211110 00226777766541 110 10
Q ss_pred HHhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCc-cchHHHHhhcCCCeEEEecc
Q 012151 94 INGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFW-FFTHTVAADFKLPTIVLQTC 152 (470)
Q Consensus 94 ~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~-~~~~~vA~~~giP~v~~~~~ 152 (470)
......+.+.+++ .+||++|.-.+. .-...+-..+...++=+.++
T Consensus 68 --~~~~~~~~~~l~~------------~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 68 --AAFESEILRELKG------------RQIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp --HHHHHHHHHHHHH------------TTCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred --hhhHHHHHHHHHh------------cCCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 0011222233333 489999987654 44555556666667766554
No 138
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=40.98 E-value=24 Score=30.00 Aligned_cols=44 Identities=5% Similarity=-0.081 Sum_probs=33.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccc
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTN 59 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~ 59 (470)
+.||++.-.++.|=+. ...|.+.|.++|++|.++.++.-.+.+.
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi~ 51 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLIP 51 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHSC
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHHH
Confidence 3478888777766554 7899999999999999999865544443
No 139
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=40.88 E-value=18 Score=28.15 Aligned_cols=32 Identities=28% Similarity=0.513 Sum_probs=24.0
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
.|+|+++-. |.+- ..+|+.|.++||+|+++..
T Consensus 4 ~m~i~IiG~---G~iG--~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 4 GMYIIIAGI---GRVG--YTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp -CEEEEECC---SHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECC---CHHH--HHHHHHHHhCCCeEEEEEC
Confidence 468888843 5553 4678999999999999875
No 140
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=40.81 E-value=25 Score=32.46 Aligned_cols=37 Identities=11% Similarity=0.077 Sum_probs=27.9
Q ss_pred EEEEcCCCccChH--------------HHHHHHHHHHhCCCeEEEEeCCCC
Q 012151 18 VILFPLPFQGHIN--------------PMLHLASILYSKGFSVTIIHTDFN 54 (470)
Q Consensus 18 il~~~~~~~GH~~--------------p~l~La~~L~~rGh~V~~~~~~~~ 54 (470)
|++...|++=.+. .-.++|+++.++|++|++++.+..
T Consensus 40 VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 40 VLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp EEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred EEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence 6666666655552 567899999999999999998643
No 141
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=40.53 E-value=45 Score=28.11 Aligned_cols=42 Identities=19% Similarity=0.160 Sum_probs=33.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccc
Q 012151 17 RVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTN 59 (470)
Q Consensus 17 ~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~ 59 (470)
||++.-.++.|-+ =...|.++|.++|++|.++.++.-...+.
T Consensus 3 ~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~ 44 (189)
T 2ejb_A 3 KIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLK 44 (189)
T ss_dssp EEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhh
Confidence 6888888887744 68999999999999999999875555444
No 142
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=40.48 E-value=44 Score=31.35 Aligned_cols=37 Identities=16% Similarity=0.173 Sum_probs=24.4
Q ss_pred CeEEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEEcC
Q 012151 283 KSVVYISFGSVIAINKDGFLEIAWGVANSRMPFLWVVRP 321 (470)
Q Consensus 283 ~~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~ 321 (470)
+.+++.+-||.....+ ...++++|.+.+.+++|+...
T Consensus 3 ~~i~i~~GGTgGHi~p--alala~~L~~~g~~V~~vg~~ 39 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFP--ALACAREFQARGYAVHWLGTP 39 (365)
T ss_dssp CEEEEECCSSHHHHHH--HHHHHHHHHHTTCEEEEEECS
T ss_pred CcEEEEcCCCHHHHHH--HHHHHHHHHhCCCEEEEEECC
Confidence 3466666667543211 235788899999999988744
No 143
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=39.14 E-value=1.6e+02 Score=25.16 Aligned_cols=37 Identities=11% Similarity=-0.003 Sum_probs=29.7
Q ss_pred EEEEc-CCCccChHHHHHHHHHHHhC-CCeEEEEeCCCC
Q 012151 18 VILFP-LPFQGHINPMLHLASILYSK-GFSVTIIHTDFN 54 (470)
Q Consensus 18 il~~~-~~~~GH~~p~l~La~~L~~r-Gh~V~~~~~~~~ 54 (470)
|.|.. -++-|-..-...||..|+++ |++|.++=.+..
T Consensus 7 I~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 7 FGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp EEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred EEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 44443 35669999999999999998 999999987654
No 144
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=38.63 E-value=24 Score=30.77 Aligned_cols=39 Identities=13% Similarity=-0.001 Sum_probs=33.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFN 54 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~ 54 (470)
|+|+|..-++-|-..-...||..|+++|++|.++=.+..
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 39 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDPD 39 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECTT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 578887777778999999999999999999999877553
No 145
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=37.98 E-value=48 Score=28.16 Aligned_cols=29 Identities=14% Similarity=0.218 Sum_probs=22.3
Q ss_pred eEEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEE
Q 012151 284 SVVYISFGSVIAINKDGFLEIAWGVANSRMPFLWV 318 (470)
Q Consensus 284 ~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~ 318 (470)
+++.+-+|+. .+..+.+||+..+..+.++
T Consensus 4 ~I~iiD~g~~------n~~si~~al~~~G~~~~v~ 32 (211)
T 4gud_A 4 NVVIIDTGCA------NISSVKFAIERLGYAVTIS 32 (211)
T ss_dssp CEEEECCCCT------THHHHHHHHHHTTCCEEEE
T ss_pred EEEEEECCCC------hHHHHHHHHHHCCCEEEEE
Confidence 4777888875 3566889999999988764
No 146
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=37.93 E-value=29 Score=28.22 Aligned_cols=37 Identities=16% Similarity=0.059 Sum_probs=29.9
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFN 54 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~ 54 (470)
..+++++..+. | +-|++++++.|.++|.+|+++ ....
T Consensus 23 ~~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~r~ 59 (158)
T 3lrx_A 23 FGKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVTF 59 (158)
T ss_dssp CSEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EECB
T ss_pred CCeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 35788887776 4 999999999999999999998 5433
No 147
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=37.74 E-value=28 Score=27.37 Aligned_cols=31 Identities=19% Similarity=0.259 Sum_probs=25.4
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 012151 17 RVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTD 52 (470)
Q Consensus 17 ~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 52 (470)
||+++-++..| ..+|+.|.++||+|+++...
T Consensus 9 ~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 9 HALLVGYGRVG-----SLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CEEEECCSHHH-----HHHHHHHHHTTCCEEEEESC
T ss_pred CEEEECcCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 78888765444 57899999999999999874
No 148
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=37.73 E-value=2.4e+02 Score=25.69 Aligned_cols=110 Identities=12% Similarity=0.116 Sum_probs=59.0
Q ss_pred eEEEEEcCcccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCc
Q 012151 284 SVVYISFGSVIAINKDGFLEIAWGVANS-RMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAV 362 (470)
Q Consensus 284 ~~I~vs~Gs~~~~~~~~~~~i~~al~~~-~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~ 362 (470)
.+.+|..|.+.. .++.++.+. +..++.++..+. + ..+.+.++.+ ...-+-+..++|..+++
T Consensus 7 ~igiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~~-------~-~~~~~~~~~~---~~~~~~~~~~ll~~~~~ 68 (330)
T 3e9m_A 7 RYGIMSTAQIVP-------RFVAGLRESAQAEVRGIASRRL-------E-NAQKMAKELA---IPVAYGSYEELCKDETI 68 (330)
T ss_dssp EEEECSCCTTHH-------HHHHHHHHSSSEEEEEEBCSSS-------H-HHHHHHHHTT---CCCCBSSHHHHHHCTTC
T ss_pred EEEEECchHHHH-------HHHHHHHhCCCcEEEEEEeCCH-------H-HHHHHHHHcC---CCceeCCHHHHhcCCCC
Confidence 467777777752 356667665 345544543221 0 1112222211 11234567888887666
Q ss_pred ceeecccCchh----hHHhhhcCCceec-CCCcc--chhh-hHHHHHhhhheeEEcCC
Q 012151 363 GGFWTHSGWNS----TLESMCEGVPMIC-QPYLP--DQMV-NARYVSHFWRVGLHSEW 412 (470)
Q Consensus 363 ~~~I~HGG~gs----~~eal~~GvP~v~-~P~~~--DQ~~-na~rv~~~~G~G~~l~~ 412 (470)
++++.-.-... +.+|+.+|+++++ -|+.. ++-. ..+..+++ |+-+.+..
T Consensus 69 D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~-g~~~~v~~ 125 (330)
T 3e9m_A 69 DIIYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQ-GVFLMEAQ 125 (330)
T ss_dssp SEEEECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHT-TCCEEECC
T ss_pred CEEEEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHc-CCeEEEEE
Confidence 66776555443 6778999998876 35443 3322 23444553 66555544
No 149
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=37.64 E-value=33 Score=28.10 Aligned_cols=39 Identities=18% Similarity=0.210 Sum_probs=30.8
Q ss_pred CEEEEEcCCCc---cChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012151 16 RRVILFPLPFQ---GHINPMLHLASILYSKGFSVTIIHTDFN 54 (470)
Q Consensus 16 ~~il~~~~~~~---GH~~p~l~La~~L~~rGh~V~~~~~~~~ 54 (470)
-+|+++|.-+. ---.+...|++.|.++|.+|.|+.++--
T Consensus 24 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPVA 65 (180)
T 1pno_A 24 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPVA 65 (180)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecccc
Confidence 47888876543 1356889999999999999999999643
No 150
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=37.42 E-value=80 Score=24.05 Aligned_cols=63 Identities=6% Similarity=-0.094 Sum_probs=36.6
Q ss_pred cCCceecCCCccchhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhccchhHHHHHHHHHHHHHH
Q 012151 380 EGVPMICQPYLPDQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVEAEGQEMRARIMHLKEKV 446 (470)
Q Consensus 380 ~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~ 446 (470)
..+|+|++--..|.......+.. .|+--.+.+.++.++|..+|++++.. ....+..+++.+..
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~-~ga~~~l~KP~~~~~L~~~i~~~~~~---~~~~~~~~~~~~~~ 133 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAIND-AGIHQFLTKPWHPEQLLSSARNAARM---FTLARENERLSLEM 133 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHH-TTCCEEEESSCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHh-hchhhhccCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
Confidence 45677776555544333344444 25533444458999999999999875 34434334444333
No 151
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=37.32 E-value=22 Score=27.90 Aligned_cols=31 Identities=16% Similarity=0.106 Sum_probs=24.0
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 012151 17 RVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTD 52 (470)
Q Consensus 17 ~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 52 (470)
+|+++-. |.+ -..+|+.|.++||+|+++...
T Consensus 8 ~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 8 EYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp SEEEECC---SHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred EEEEECC---CHH--HHHHHHHHHHCCCeEEEEECC
Confidence 6888765 433 467899999999999998763
No 152
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=37.09 E-value=1.6e+02 Score=24.27 Aligned_cols=115 Identities=10% Similarity=-0.003 Sum_probs=64.5
Q ss_pred CeEEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCcee---eeccChHhhhcc
Q 012151 283 KSVVYISFGSVIAINKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCI---VKWAPQQEVLAH 359 (470)
Q Consensus 283 ~~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~---~~~~p~~~lL~~ 359 (470)
+.+++.-.|+.... ....+++.|.+.+..+-+++...... -+.....+...+.++. ..|+++-++-..
T Consensus 6 k~IllgvTGs~aa~---k~~~ll~~L~~~g~~V~vv~T~~A~~------fi~~~~l~~l~~~v~~~~~~~~~~hi~l~~~ 76 (175)
T 3qjg_A 6 ENVLICLCGSVNSI---NISHYIIELKSKFDEVNVIASTNGRK------FINGEILKQFCDNYYDEFEDPFLNHVDIANK 76 (175)
T ss_dssp CEEEEEECSSGGGG---GHHHHHHHHTTTCSEEEEEECTGGGG------GSCHHHHHHHCSCEECTTTCTTCCHHHHHHT
T ss_pred CEEEEEEeCHHHHH---HHHHHHHHHHHCCCEEEEEECcCHHH------HhhHHHHHHhcCCEEecCCCCccccccccch
Confidence 45666666777643 24557777877787776666443211 1222222333332221 134556666555
Q ss_pred CCcceeecccCchhhH-------------HhhhcCCceecCCCc-------cchhhhHHHHHhhhheeE
Q 012151 360 PAVGGFWTHSGWNSTL-------------ESMCEGVPMICQPYL-------PDQMVNARYVSHFWRVGL 408 (470)
Q Consensus 360 ~~~~~~I~HGG~gs~~-------------eal~~GvP~v~~P~~-------~DQ~~na~rv~~~~G~G~ 408 (470)
+++ .+|--+-.||+. -+++.++|+|++|.. .=...|-.++.+ +|+=+
T Consensus 77 aD~-~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~-~G~~i 143 (175)
T 3qjg_A 77 HDK-IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKD-YGVSI 143 (175)
T ss_dssp CSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHH-TTCEE
T ss_pred hCE-EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHHH-CCCEE
Confidence 554 355555555433 357789999999943 223457778888 58643
No 153
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=36.93 E-value=24 Score=33.31 Aligned_cols=31 Identities=29% Similarity=0.248 Sum_probs=25.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
|||+|+-.+--| +.+|..|+++|++|+++--
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~Er 32 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIYER 32 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEEec
Confidence 789988666444 7889999999999999843
No 154
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=36.77 E-value=35 Score=28.09 Aligned_cols=39 Identities=18% Similarity=0.134 Sum_probs=30.7
Q ss_pred CEEEEEcCCCc---cChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012151 16 RRVILFPLPFQ---GHINPMLHLASILYSKGFSVTIIHTDFN 54 (470)
Q Consensus 16 ~~il~~~~~~~---GH~~p~l~La~~L~~rGh~V~~~~~~~~ 54 (470)
-+|+++|.-+. ---.+...|++.|.++|.+|.|+.++--
T Consensus 23 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPVA 64 (184)
T 1d4o_A 23 NSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPVA 64 (184)
T ss_dssp SEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecccc
Confidence 47888876543 1346889999999999999999999543
No 155
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=36.16 E-value=49 Score=25.74 Aligned_cols=41 Identities=7% Similarity=0.073 Sum_probs=28.4
Q ss_pred EEEcCCCcc--ChHHHHHHHHHHHhCCCeE-EEEeCCCCCcccc
Q 012151 19 ILFPLPFQG--HINPMLHLASILYSKGFSV-TIIHTDFNFSSTN 59 (470)
Q Consensus 19 l~~~~~~~G--H~~p~l~La~~L~~rGh~V-~~~~~~~~~~~~~ 59 (470)
+++..+.+| .....+.+|..+.+.||+| .++-.........
T Consensus 5 iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~dGV~~~~ 48 (130)
T 2hy5_A 5 LQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHDGVNNST 48 (130)
T ss_dssp EEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGGGGGGGB
T ss_pred EEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEechHHHHHh
Confidence 334444444 4667899999999999999 8887754444433
No 156
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=34.69 E-value=43 Score=25.67 Aligned_cols=40 Identities=13% Similarity=0.071 Sum_probs=28.9
Q ss_pred CCEEEEEcCCCc-cCh-HHHHHHHHHHHhCC--CeEEEEeCCCC
Q 012151 15 GRRVILFPLPFQ-GHI-NPMLHLASILYSKG--FSVTIIHTDFN 54 (470)
Q Consensus 15 ~~~il~~~~~~~-GH~-~p~l~La~~L~~rG--h~V~~~~~~~~ 54 (470)
+++++|+-+.+. -.. +..+..|....++| |+|.++.....
T Consensus 7 ~~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~~ 50 (117)
T 2fb6_A 7 NDKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGAS 50 (117)
T ss_dssp TSEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSHH
T ss_pred CCeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECCe
Confidence 467777777654 222 45788899999999 89999887543
No 157
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=34.67 E-value=28 Score=32.39 Aligned_cols=32 Identities=25% Similarity=0.196 Sum_probs=24.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
.|+|+++-.+..| ..+|..|.++||+|+++..
T Consensus 4 ~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 4 SKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 4789999765544 3578889999999998754
No 158
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=34.47 E-value=38 Score=28.39 Aligned_cols=39 Identities=18% Similarity=0.210 Sum_probs=30.8
Q ss_pred CEEEEEcCCCc---cChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012151 16 RRVILFPLPFQ---GHINPMLHLASILYSKGFSVTIIHTDFN 54 (470)
Q Consensus 16 ~~il~~~~~~~---GH~~p~l~La~~L~~rGh~V~~~~~~~~ 54 (470)
-+|+|+|.-+. =--.+...|++.|.++|.+|.|..++--
T Consensus 47 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPVA 88 (203)
T 2fsv_C 47 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPVA 88 (203)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEecccc
Confidence 47888876543 1346789999999999999999999643
No 159
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=34.36 E-value=26 Score=33.40 Aligned_cols=60 Identities=18% Similarity=0.324 Sum_probs=38.2
Q ss_pred ChHhhhccCCcceeecccCchhhHHhhhc----CC-ceecCCCccchhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHH
Q 012151 352 PQQEVLAHPAVGGFWTHSGWNSTLESMCE----GV-PMICQPYLPDQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRV 426 (470)
Q Consensus 352 p~~~lL~~~~~~~~I~HGG~gs~~eal~~----Gv-P~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~v 426 (470)
+..++-..+++ +|+=||-||+..|+.. ++ |++++... . + |-.. .++.+++.++++++
T Consensus 107 ~~~~~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN~G-----------~-l--GFLt--~~~~~~~~~al~~i 168 (388)
T 3afo_A 107 PEQDIVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFALG-----------T-L--GFLS--PFDFKEHKKVFQEV 168 (388)
T ss_dssp CHHHHHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEECS-----------S-C--CSSC--CEEGGGHHHHHHHH
T ss_pred chhhcccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEECC-----------C-c--ccCC--cCChHHHHHHHHHH
Confidence 34445545666 9999999999999643 67 78887532 0 1 1111 34556777777777
Q ss_pred hcc
Q 012151 427 MVE 429 (470)
Q Consensus 427 l~~ 429 (470)
+++
T Consensus 169 l~g 171 (388)
T 3afo_A 169 ISS 171 (388)
T ss_dssp HTT
T ss_pred hcC
Confidence 664
No 160
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=34.10 E-value=1.7e+02 Score=25.11 Aligned_cols=117 Identities=14% Similarity=0.056 Sum_probs=71.0
Q ss_pred HHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHhhh
Q 012151 300 GFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMC 379 (470)
Q Consensus 300 ~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~ 379 (470)
+-..+++.+++.+.++++..+.. ..+|+.+.+..+..+.-+ |+++ .=..-|...+..|+.
T Consensus 77 ~d~~~~~~l~~~~~Dlivlagy~--------~iL~~~~l~~~~~~~iNi----------HpSL--LP~yrG~~pi~~Ai~ 136 (215)
T 3da8_A 77 WDVAITAATAAHEPDLVVSAGFM--------RILGPQFLSRFYGRTLNT----------HPAL--LPAFPGTHGVADALA 136 (215)
T ss_dssp HHHHHHHHHHTTCCSEEEEEECC--------SCCCHHHHHHHTTTEEEE----------ESSC--TTSSCSTTHHHHHHH
T ss_pred hhHHHHHHHHhhCCCEEEEcCch--------hhCCHHHHhhccCCeEEe----------Cccc--ccCCCCchHHHHHHH
Confidence 34457888888888888888664 357787776654433322 3333 233458899999999
Q ss_pred cCCceecCCCcc--chhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhccchhHHHHHHHHHHH
Q 012151 380 EGVPMICQPYLP--DQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVEAEGQEMRARIMHLK 443 (470)
Q Consensus 380 ~GvP~v~~P~~~--DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~ 443 (470)
+|....++-.+. +..+.+.-+.+. - +.+...-|.++|.+.+.++-. +-|.+..+.+.
T Consensus 137 ~G~~~tGvTvh~v~~~lD~G~Ii~Q~-~--v~I~~~dt~~~L~~rl~~~~~----~ll~~~l~~~~ 195 (215)
T 3da8_A 137 YGVKVTGATVHLVDAGTDTGPILAQQ-P--VPVLDGDDEETLHERIKVTER----RLLVAAVAALA 195 (215)
T ss_dssp HTCSEEEEEEEECCSSSSCSCEEEEE-E--EECCTTCCHHHHHHHHHHHHH----HHHHHHHHHHH
T ss_pred cCCCeEEEEEEEEcCCCCCCCEEEEE-E--eecCCCCCHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 999988877653 444433333332 1 222224577888877765422 35555554443
No 161
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=33.90 E-value=55 Score=24.58 Aligned_cols=37 Identities=14% Similarity=-0.006 Sum_probs=29.0
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
.|+|+++|..|.|+-.-.-.+-+.+.++|.++.+-+.
T Consensus 4 ~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~ 40 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAI 40 (109)
T ss_dssp CEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEE
T ss_pred ceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 4789999999998886666777888888987765443
No 162
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=33.84 E-value=1.2e+02 Score=27.67 Aligned_cols=118 Identities=12% Similarity=0.070 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHh
Q 012151 298 KDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLES 377 (470)
Q Consensus 298 ~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~ea 377 (470)
.+.-..+++.+++.+..+++..+.. ..+|+.+.+..+.++.-+ ||++ .=...|.+.+..|
T Consensus 167 ~~~~~~~~~~l~~~~~DliVlagym--------~IL~~~~l~~~~~~~INi----------HpSl--LP~frG~~p~~~A 226 (302)
T 3o1l_A 167 EPAFAEVSRLVGHHQADVVVLARYM--------QILPPQLCREYAHQVINI----------HHSF--LPSFVGAKPYHQA 226 (302)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESSCC--------SCCCTTHHHHTTTCEEEE----------ESSC--TTSSCSSCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEHhHhh--------hhcCHHHHhhhhCCeEEe----------Cccc--ccCCCCccHHHHH
Confidence 3344567888888888888887664 357777776665443322 2332 2234688999999
Q ss_pred hhcCCceecCCCcc--chhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhccchhHHHHHHHHHH
Q 012151 378 MCEGVPMICQPYLP--DQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVEAEGQEMRARIMHL 442 (470)
Q Consensus 378 l~~GvP~v~~P~~~--DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l 442 (470)
+.+|+...++-.+. +..+-+.-+.+. -+.+...-|.++|.+.+.++-. .-|.+.++.+
T Consensus 227 i~~G~k~tG~TvH~v~~~lD~GpII~Q~---~v~I~~~dt~~~L~~r~~~~e~----~~l~~av~~~ 286 (302)
T 3o1l_A 227 SLRGVKLIGATCHYVTEELDAGPIIEQD---VVRVSHRDSIENMVRFGRDVEK----MVLARGLRAH 286 (302)
T ss_dssp HHHTCSEEEEEEEECCSSTTCSCEEEEE---EEECCTTCCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred HHcCCCeEEEEEEEECCCCcCCCeEEEE---EEecCCCCCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 99999998887653 344433333332 1122224578888887765533 3455544443
No 163
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=33.57 E-value=40 Score=28.36 Aligned_cols=39 Identities=18% Similarity=0.134 Sum_probs=30.9
Q ss_pred CEEEEEcCCCc---cChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012151 16 RRVILFPLPFQ---GHINPMLHLASILYSKGFSVTIIHTDFN 54 (470)
Q Consensus 16 ~~il~~~~~~~---GH~~p~l~La~~L~~rGh~V~~~~~~~~ 54 (470)
-+|+|+|.-+. =--.+...|++.|.++|.+|.|+.++--
T Consensus 46 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPVA 87 (207)
T 1djl_A 46 NSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPVA 87 (207)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCccC
Confidence 47888876543 1456789999999999999999999643
No 164
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=33.17 E-value=46 Score=32.37 Aligned_cols=40 Identities=18% Similarity=0.203 Sum_probs=33.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHh-CCCeEEEEeCCCCC
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYS-KGFSVTIIHTDFNF 55 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~-rGh~V~~~~~~~~~ 55 (470)
--+++...|+.|-..-++.+|..++. .|..|.|++.+...
T Consensus 204 ~liiI~G~pG~GKTtl~l~ia~~~~~~~g~~Vl~~s~E~s~ 244 (454)
T 2r6a_A 204 DLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSA 244 (454)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEEESSSCH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEEECCCCH
Confidence 36788888899999999999998876 58999999987543
No 165
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=32.84 E-value=46 Score=30.72 Aligned_cols=32 Identities=22% Similarity=0.187 Sum_probs=27.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
++|.|+-.++.| +-.+|+.|+++||+|+..=.
T Consensus 5 ~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 5 KHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred cEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 479999999877 55799999999999998654
No 166
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=32.70 E-value=82 Score=24.47 Aligned_cols=49 Identities=12% Similarity=-0.092 Sum_probs=31.9
Q ss_pred hcCCceecCCCccchhhhHHHHHhhhh-eeEEcCCcccHHHHHHHHHHHhcc
Q 012151 379 CEGVPMICQPYLPDQMVNARYVSHFWR-VGLHSEWKLERMEIERAIRRVMVE 429 (470)
Q Consensus 379 ~~GvP~v~~P~~~DQ~~na~rv~~~~G-~G~~l~~~~~~~~l~~ai~~vl~~ 429 (470)
...+|+|++--..|... .....+ .| +--.+.+.++.++|.++|++++..
T Consensus 74 ~~~~~ii~~s~~~~~~~-~~~~~~-~g~~~~~l~KP~~~~~L~~~i~~~l~~ 123 (151)
T 3kcn_A 74 SPNSVYLMLTGNQDLTT-AMEAVN-EGQVFRFLNKPCQMSDIKAAINAGIKQ 123 (151)
T ss_dssp CSSCEEEEEECGGGHHH-HHHHHH-HTCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEECCCCHHH-HHHHHH-cCCeeEEEcCCCCHHHHHHHHHHHHHH
Confidence 34677777655544433 333444 26 533444458999999999999986
No 167
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=32.57 E-value=18 Score=32.84 Aligned_cols=29 Identities=10% Similarity=-0.013 Sum_probs=24.1
Q ss_pred cCCcceeecccCchhhHHhhh----cCCceecCCC
Q 012151 359 HPAVGGFWTHSGWNSTLESMC----EGVPMICQPY 389 (470)
Q Consensus 359 ~~~~~~~I~HGG~gs~~eal~----~GvP~v~~P~ 389 (470)
.+++ +|.-||=||+.+++. .++|+++++.
T Consensus 63 ~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 63 QADL--AVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred CCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 4565 999999999999974 3889999874
No 168
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=32.32 E-value=49 Score=24.82 Aligned_cols=33 Identities=12% Similarity=0.040 Sum_probs=25.4
Q ss_pred cChHHHHHHHHHHHhC-CC-eEEEEeCCCCCcccc
Q 012151 27 GHINPMLHLASILYSK-GF-SVTIIHTDFNFSSTN 59 (470)
Q Consensus 27 GH~~p~l~La~~L~~r-Gh-~V~~~~~~~~~~~~~ 59 (470)
......+.+|..+.+. || +|+++..........
T Consensus 16 ~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~~~~ 50 (117)
T 1jx7_A 16 ESLFNSLRLAIALREQESNLDLRLFLMSDAVTAGL 50 (117)
T ss_dssp SHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGGB
T ss_pred HHHHHHHHHHHHHHhcCCCccEEEEEEchHHHHHh
Confidence 4567789999999999 99 999988765544443
No 169
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=32.10 E-value=97 Score=28.04 Aligned_cols=116 Identities=14% Similarity=0.111 Sum_probs=71.6
Q ss_pred HHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHhhh
Q 012151 300 GFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMC 379 (470)
Q Consensus 300 ~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~ 379 (470)
+-..+++.+++.+..+++..+.. ..+|+.+.+..+.++.-+ ||++ .=...|.+.+..|+.
T Consensus 153 ~~~~~~~~l~~~~~Dlivlagym--------~il~~~~l~~~~~~~iNi----------HpSl--LP~~rG~~p~~~Ai~ 212 (287)
T 3nrb_A 153 QESQIKNIVTQSQADLIVLARYM--------QILSDDLSAFLSGRCINI----------HHSF--LPGFKGAKPYHQAHT 212 (287)
T ss_dssp HHHHHHHHHHHHTCSEEEESSCC--------SCCCHHHHHHHTTSEEEE----------ESSC--TTTTCSSCHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEhhhhh--------hhcCHHHHhhccCCeEEE----------Cccc--ccCCCCchHHHHHHH
Confidence 34457888888888998888664 458888877765543322 2332 233468999999999
Q ss_pred cCCceecCCCcc--chhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhccchhHHHHHHHHHH
Q 012151 380 EGVPMICQPYLP--DQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVEAEGQEMRARIMHL 442 (470)
Q Consensus 380 ~GvP~v~~P~~~--DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l 442 (470)
+|+...++-.+. +..+-+.-+.+. -+.+...-|.++|.+.+.++-. .-|.+.++.+
T Consensus 213 ~G~k~tG~Tvh~v~~~lD~GpIi~Q~---~v~i~~~dt~~~L~~r~~~~e~----~~l~~av~~~ 270 (287)
T 3nrb_A 213 RGVKLIGATAHFVTADLDEGPIIAQD---VEHVSHRDSAEDLVRKGRDIER----RVLSRAVLLF 270 (287)
T ss_dssp HTCSEEEEEEEECCSSSSCCCEEEEE---EEECCTTCCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred cCCCeEEEEEEEECCCCcCCCEEEEE---EEecCCCCCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 999998887653 333333333331 1122224578888877765533 3455544443
No 170
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=31.84 E-value=1.7e+02 Score=27.03 Aligned_cols=41 Identities=7% Similarity=0.022 Sum_probs=28.1
Q ss_pred CEEEEEcCCCcc--Ch--HHHHHHHHHHHhCCCeEEEEeCCCCCc
Q 012151 16 RRVILFPLPFQG--HI--NPMLHLASILYSKGFSVTIIHTDFNFS 56 (470)
Q Consensus 16 ~~il~~~~~~~G--H~--~p~l~La~~L~~rGh~V~~~~~~~~~~ 56 (470)
..|++.|..+.. .+ .-+.+|++.|.++|++|.++..+...+
T Consensus 186 ~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~ 230 (349)
T 3tov_A 186 ILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLE 230 (349)
T ss_dssp CEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHH
T ss_pred CEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHH
Confidence 356666665442 33 358999999998999998866544433
No 171
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=31.41 E-value=41 Score=30.77 Aligned_cols=33 Identities=12% Similarity=0.164 Sum_probs=27.2
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDF 53 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~ 53 (470)
+|+|+++..+ ....+++++.++||+|.++.+..
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~ 34 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSSK 34 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCGG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCC
Confidence 3689998876 56789999999999999987743
No 172
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=31.34 E-value=48 Score=29.35 Aligned_cols=38 Identities=16% Similarity=0.121 Sum_probs=30.1
Q ss_pred CCCEEEEEcCCC--ccChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 14 NGRRVILFPLPF--QGHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 14 ~~~~il~~~~~~--~GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
++|+.+|++... -|-..-...|++.|+++|++|.++=+
T Consensus 24 ~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKP 63 (251)
T 3fgn_A 24 SHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKP 63 (251)
T ss_dssp SSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred cCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEee
Confidence 456666655544 38999999999999999999999864
No 173
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=30.77 E-value=2.1e+02 Score=24.28 Aligned_cols=114 Identities=10% Similarity=0.089 Sum_probs=67.4
Q ss_pred HHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHhhhcC
Q 012151 302 LEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMCEG 381 (470)
Q Consensus 302 ~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~G 381 (470)
..+++.+++.+.+++++.+.. ..+|+.+.+..+..+.-+ ||++ .=-..|...+..|+.+|
T Consensus 69 ~~~~~~l~~~~~Dliv~a~y~--------~il~~~~l~~~~~~~iNi----------HpSL--LP~yrG~~pi~~Ai~~G 128 (209)
T 1meo_A 69 SAIDLVLEEFSIDIVCLAGFM--------RILSGPFVQKWNGKMLNI----------HPSL--LPSFKGSNAHEQALETG 128 (209)
T ss_dssp HHHHHHHHHTTCCEEEEESCC--------SCCCHHHHHHTTTSEEEE----------ESSS--TTSSCSSCHHHHHHHHT
T ss_pred HHHHHHHHhcCCCEEEEcchh--------hhCCHHHHhhhcCCEEEE----------ccCc--CcCCCCccHHHHHHHcC
Confidence 457888888888888888654 357777765544332222 3333 33346889999999999
Q ss_pred CceecCCCcc--chhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhccchhHHHHHHHHHH
Q 012151 382 VPMICQPYLP--DQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVEAEGQEMRARIMHL 442 (470)
Q Consensus 382 vP~v~~P~~~--DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l 442 (470)
....++-.+. +..|.+.-+.+. - +.+...-|.++|.+.+.++-. +-|.+..+.+
T Consensus 129 ~~~tGvTvh~v~~~~D~G~Ii~Q~-~--v~I~~~dt~~~L~~rl~~~~~----~ll~~~l~~~ 184 (209)
T 1meo_A 129 VTVTGCTVHFVAEDVDAGQIILQE-A--VPVKRGDTVATLSERVKLAEH----KIFPAALQLV 184 (209)
T ss_dssp CSEEEEEEEECCC---CCCEEEEE-E--EECCTTCCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred CCcEEEEEEEECCCCcCCCEEEEE-E--EecCCCCCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 9988877553 444444333332 1 122224577888777755422 3455554444
No 174
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=30.70 E-value=38 Score=27.87 Aligned_cols=39 Identities=18% Similarity=0.155 Sum_probs=31.1
Q ss_pred CEEEEEcCCCc---cChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012151 16 RRVILFPLPFQ---GHINPMLHLASILYSKGFSVTIIHTDFN 54 (470)
Q Consensus 16 ~~il~~~~~~~---GH~~p~l~La~~L~~rGh~V~~~~~~~~ 54 (470)
-+|+|+|.-+. ---.+...|++.|.++|.+|.|+.++--
T Consensus 31 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPVA 72 (186)
T 2bru_C 31 HSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPVA 72 (186)
T ss_dssp SEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSSS
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecccc
Confidence 47888876543 1346899999999999999999999644
No 175
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=30.51 E-value=17 Score=33.42 Aligned_cols=31 Identities=10% Similarity=0.055 Sum_probs=23.9
Q ss_pred hccCCcceeecccCchhhHHhhhc----CCceecCCC
Q 012151 357 LAHPAVGGFWTHSGWNSTLESMCE----GVPMICQPY 389 (470)
Q Consensus 357 L~~~~~~~~I~HGG~gs~~eal~~----GvP~v~~P~ 389 (470)
...+++ +|.-||-||+.+++.. ++|+++++.
T Consensus 73 ~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 73 ADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ---CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred ccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 334565 9999999999999754 899999874
No 176
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=30.41 E-value=70 Score=26.85 Aligned_cols=33 Identities=15% Similarity=0.177 Sum_probs=23.4
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTD 52 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 52 (470)
|+|++.-.. |.+ -..|+++|.++||+|+.+.-.
T Consensus 1 MkvlVtGat--G~i--G~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIGAT--GRA--GSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEETTT--SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEcCC--chh--HHHHHHHHHhCCCEEEEEEcC
Confidence 466655433 433 357899999999999998763
No 177
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=30.37 E-value=19 Score=33.94 Aligned_cols=31 Identities=10% Similarity=0.076 Sum_probs=23.7
Q ss_pred hhhccCCcceeecccCchhhHHhhh----cCCceecC
Q 012151 355 EVLAHPAVGGFWTHSGWNSTLESMC----EGVPMICQ 387 (470)
Q Consensus 355 ~lL~~~~~~~~I~HGG~gs~~eal~----~GvP~v~~ 387 (470)
++-..+++ +|+=||-||+..|.. .++|++++
T Consensus 104 ~~~~~~Dl--vI~lGGDGT~L~aa~~~~~~~~PvlGi 138 (365)
T 3pfn_A 104 DISNQIDF--IICLGGDGTLLYASSLFQGSVPPVMAF 138 (365)
T ss_dssp CCTTTCSE--EEEESSTTHHHHHHHHCSSSCCCEEEE
T ss_pred hcccCCCE--EEEEcChHHHHHHHHHhccCCCCEEEE
Confidence 34445566 999999999999976 35788875
No 178
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=30.32 E-value=63 Score=29.98 Aligned_cols=73 Identities=11% Similarity=0.134 Sum_probs=45.3
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhH
Q 012151 296 INKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTL 375 (470)
Q Consensus 296 ~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~ 375 (470)
.+.+....+.+|++....+.||.+.++.... ++.++++...+-++|.. ||=.+-...++
T Consensus 62 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~~-------------------rlL~~lD~~~i~~~PK~--~~GySDiTaL~ 120 (331)
T 4e5s_A 62 SISSRVQDLHEAFRDPNVKAILTTLGGYNSN-------------------GLLKYLDYDLIRENPKF--FCGYSDITALN 120 (331)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSCGG-------------------GGGGGCCHHHHHTSCCE--EEECGGGHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccccHH-------------------HHHhhcChhHHHhCCeE--EEEecchHHHH
Confidence 3455677799999998999999987653111 34455555555555555 66666665665
Q ss_pred Hhhh--cCCceecCCC
Q 012151 376 ESMC--EGVPMICQPY 389 (470)
Q Consensus 376 eal~--~GvP~v~~P~ 389 (470)
-+++ .|++.+-=|+
T Consensus 121 ~al~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 121 NAIYTKTGLVTYSGPH 136 (331)
T ss_dssp HHHHHHHCBCEEECCC
T ss_pred HHHHHhhCCcEEEccc
Confidence 5555 3555554444
No 179
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=29.97 E-value=2e+02 Score=24.60 Aligned_cols=104 Identities=7% Similarity=0.071 Sum_probs=56.6
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHh-CCCeEEEEeCCCCCc----ccccccCCCCCeeEEecCC-CCCCCcccccCH
Q 012151 14 NGRRVILFPLPFQGHINPMLHLASILYS-KGFSVTIIHTDFNFS----STNYFSCNYPHFDFHSFPD-GFSETEASVEDV 87 (470)
Q Consensus 14 ~~~~il~~~~~~~GH~~p~l~La~~L~~-rGh~V~~~~~~~~~~----~~~~~~~~~~gi~~~~~~~-~~~~~~~~~~~~ 87 (470)
+++||+++..+..+. +.+|.+.+.+ .+++|..+.+..... ...+ .|+.+..++. .++ +-
T Consensus 4 ~~~riavl~SG~Gsn---l~all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~-----~gIp~~~~~~~~~~-------~r 68 (215)
T 3tqr_A 4 EPLPIVVLISGNGTN---LQAIIGAIQKGLAIEIRAVISNRADAYGLKRAQQ-----ADIPTHIIPHEEFP-------SR 68 (215)
T ss_dssp CCEEEEEEESSCCHH---HHHHHHHHHTTCSEEEEEEEESCTTCHHHHHHHH-----TTCCEEECCGGGSS-------SH
T ss_pred CCcEEEEEEeCCcHH---HHHHHHHHHcCCCCEEEEEEeCCcchHHHHHHHH-----cCCCEEEeCccccC-------ch
Confidence 467898887776333 3445555543 368888877642211 2233 6888877652 111 00
Q ss_pred HHHHHHHHhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCc-cchHHHHhhcCCCeEEEecc
Q 012151 88 AVFFTAINGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFW-FFTHTVAADFKLPTIVLQTC 152 (470)
Q Consensus 88 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~-~~~~~vA~~~giP~v~~~~~ 152 (470)
.. .... +++.+.+ .+||+||.-.+. .-...+-..+...++=+.++
T Consensus 69 ~~--------~d~~---~~~~l~~---------~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 69 TD--------FEST---LQKTIDH---------YDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp HH--------HHHH---HHHHHHT---------TCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred hH--------hHHH---HHHHHHh---------cCCCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 00 0122 2333332 489999987654 44555555666667766554
No 180
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=29.83 E-value=58 Score=29.90 Aligned_cols=33 Identities=18% Similarity=0.375 Sum_probs=26.4
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 14 NGRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 14 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
+.++|.|+-.+..| ..+|+.|+++||+|+++..
T Consensus 30 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 30 YARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 35789999776666 6788999999999998744
No 181
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=29.45 E-value=2.9e+02 Score=25.30 Aligned_cols=124 Identities=12% Similarity=0.104 Sum_probs=68.0
Q ss_pred eEEEEEcCcccccCHHHHHHHHHHHHhC--CCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCC
Q 012151 284 SVVYISFGSVIAINKDGFLEIAWGVANS--RMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPA 361 (470)
Q Consensus 284 ~~I~vs~Gs~~~~~~~~~~~i~~al~~~--~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~ 361 (470)
.+.+|..|.+.. .++.++.+. +..++.++..+. + .-+.+.++. -+..+-+..++|..++
T Consensus 15 rvgiiG~G~~g~-------~~~~~l~~~~~~~~lvav~d~~~-------~-~~~~~~~~~----~~~~~~~~~~ll~~~~ 75 (354)
T 3q2i_A 15 RFALVGCGRIAN-------NHFGALEKHADRAELIDVCDIDP-------A-ALKAAVERT----GARGHASLTDMLAQTD 75 (354)
T ss_dssp EEEEECCSTTHH-------HHHHHHHHTTTTEEEEEEECSSH-------H-HHHHHHHHH----CCEEESCHHHHHHHCC
T ss_pred eEEEEcCcHHHH-------HHHHHHHhCCCCeEEEEEEcCCH-------H-HHHHHHHHc----CCceeCCHHHHhcCCC
Confidence 578888888763 355666665 455555553321 0 011122222 1345567888898666
Q ss_pred cceeecccCch----hhHHhhhcCCceec-CCCcc--ch-hhhHHHHHhhhheeEEcCC--cccHHHHHHHHHHHhcc
Q 012151 362 VGGFWTHSGWN----STLESMCEGVPMIC-QPYLP--DQ-MVNARYVSHFWRVGLHSEW--KLERMEIERAIRRVMVE 429 (470)
Q Consensus 362 ~~~~I~HGG~g----s~~eal~~GvP~v~-~P~~~--DQ-~~na~rv~~~~G~G~~l~~--~~~~~~l~~ai~~vl~~ 429 (470)
+++++--.-.. .+.+|+.+|+++++ -|+.. ++ ....+..+++ |+-+.+.. ..++ ..+.+++++.+
T Consensus 76 ~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~-g~~~~v~~~~r~~p--~~~~~k~~i~~ 150 (354)
T 3q2i_A 76 ADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKA-KKHLFVVKQNRRNA--TLQLLKRAMQE 150 (354)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHH-TCCEEECCGGGGSH--HHHHHHHHHHT
T ss_pred CCEEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHh-CCeEEEEEcccCCH--HHHHHHHHHhc
Confidence 66677544433 46778999999887 36543 22 2333455553 76666554 3444 23444555443
No 182
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=29.32 E-value=1.7e+02 Score=29.01 Aligned_cols=34 Identities=21% Similarity=0.320 Sum_probs=22.9
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDF 53 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~ 53 (470)
..+++++. .-.-.+.|++.|.+-|-+|..+....
T Consensus 360 Gkrv~i~g-----d~~~~~~la~~L~ElGm~vv~v~~~~ 393 (519)
T 1qgu_B 360 GKKFGLYG-----DPDFVMGLTRFLLELGCEPTVILSHN 393 (519)
T ss_dssp TCEEEEES-----CHHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHCCCEEEEEEeCC
Confidence 34777773 33345677888888898888766543
No 183
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=29.25 E-value=2.2e+02 Score=24.37 Aligned_cols=98 Identities=10% Similarity=0.049 Sum_probs=56.2
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCC--c--ccccccCCCCCeeEEecCC-CCCCCcccccCH
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSK--GFSVTIIHTDFNF--S--STNYFSCNYPHFDFHSFPD-GFSETEASVEDV 87 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~V~~~~~~~~~--~--~~~~~~~~~~gi~~~~~~~-~~~~~~~~~~~~ 87 (470)
++||+++.++. ||. +.+|.+.+.+. +++|..+.+.... . ...+ .|+.+..++. .+. +
T Consensus 8 ~~ri~vl~SG~-gsn--l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~-----~gIp~~~~~~~~~~-------~- 71 (215)
T 3kcq_A 8 ELRVGVLISGR-GSN--LEALAKAFSTEESSVVISCVISNNAEARGLLIAQS-----YGIPTFVVKRKPLD-------I- 71 (215)
T ss_dssp CEEEEEEESSC-CHH--HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHH-----TTCCEEECCBTTBC-------H-
T ss_pred CCEEEEEEECC-cHH--HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHH-----cCCCEEEeCcccCC-------h-
Confidence 56888887776 443 55666666544 3788877763211 1 2223 6788777652 110 0
Q ss_pred HHHHHHHHhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCc-cchHHHHhhcCCCeEEEecc
Q 012151 88 AVFFTAINGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFW-FFTHTVAADFKLPTIVLQTC 152 (470)
Q Consensus 88 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~-~~~~~vA~~~giP~v~~~~~ 152 (470)
+.+.+.+++ .+||+||.-.+. .-...+-..+...++=+.++
T Consensus 72 ------------~~~~~~L~~------------~~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 72 ------------EHISTVLRE------------HDVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp ------------HHHHHHHHH------------TTCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ------------HHHHHHHHH------------hCCCEEEEeCCceEeCHHHHhhccCCeEEECcc
Confidence 233333343 389999987654 44555555666667766544
No 184
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=28.94 E-value=53 Score=32.43 Aligned_cols=41 Identities=7% Similarity=-0.135 Sum_probs=34.6
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEeCCCCCc
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSK-GFSVTIIHTDFNFS 56 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~V~~~~~~~~~~ 56 (470)
--+++...|+.|-..-++.+|..++.+ |..|.+++.+....
T Consensus 243 ~l~li~G~pG~GKT~lal~~a~~~a~~~g~~vl~~s~E~s~~ 284 (503)
T 1q57_A 243 EVIMVTSGSGMVMSTFVRQQALQWGTAMGKKVGLAMLEESVE 284 (503)
T ss_dssp CEEEEEESSCHHHHHHHHHHHHHHTTTSCCCEEEEESSSCHH
T ss_pred eEEEEeecCCCCchHHHHHHHHHHHHhcCCcEEEEeccCCHH
Confidence 357778888889999999999999887 99999999876543
No 185
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=28.82 E-value=2.5e+02 Score=25.97 Aligned_cols=110 Identities=9% Similarity=-0.006 Sum_probs=59.4
Q ss_pred eEEEEEcCcccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCc-eeeeccChHhhhccCC
Q 012151 284 SVVYISFGSVIAINKDGFLEIAWGVANS-RMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRG-CIVKWAPQQEVLAHPA 361 (470)
Q Consensus 284 ~~I~vs~Gs~~~~~~~~~~~i~~al~~~-~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~p~~~lL~~~~ 361 (470)
.+.+|..|.+.. ..++.++.+. +..++.++..+ ++.. +...+.. ...-+-+..++|..++
T Consensus 7 rigiIG~G~~g~------~~~~~~l~~~~~~~l~av~d~~-----------~~~~-~~~a~~~~~~~~~~~~~~ll~~~~ 68 (359)
T 3m2t_A 7 KVGLVGIGAQMQ------ENLLPSLLQMQDIRIVAACDSD-----------LERA-RRVHRFISDIPVLDNVPAMLNQVP 68 (359)
T ss_dssp EEEEECCSHHHH------HTHHHHHHTCTTEEEEEEECSS-----------HHHH-GGGGGTSCSCCEESSHHHHHHHSC
T ss_pred eEEEECCCHHHH------HHHHHHHHhCCCcEEEEEEcCC-----------HHHH-HHHHHhcCCCcccCCHHHHhcCCC
Confidence 467788887642 2356666665 45555555332 1111 1111111 1223456788998887
Q ss_pred cceeecccCchh----hHHhhhcCCceec-CCCccc--hhh-hHHHHHhhhheeEEcCC
Q 012151 362 VGGFWTHSGWNS----TLESMCEGVPMIC-QPYLPD--QMV-NARYVSHFWRVGLHSEW 412 (470)
Q Consensus 362 ~~~~I~HGG~gs----~~eal~~GvP~v~-~P~~~D--Q~~-na~rv~~~~G~G~~l~~ 412 (470)
+++++-..-..+ +.+|+.+|+++++ -|+..+ +-. -.+.++++ |+-+.+..
T Consensus 69 vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~-g~~~~v~~ 126 (359)
T 3m2t_A 69 LDAVVMAGPPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRS-DVVSGVGM 126 (359)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHH-TCCEEECC
T ss_pred CCEEEEcCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHc-CCEEEEEe
Confidence 777876655443 6678888888776 355432 222 23444553 66555544
No 186
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=28.77 E-value=78 Score=26.71 Aligned_cols=33 Identities=12% Similarity=0.192 Sum_probs=23.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTD 52 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 52 (470)
|+|++.-.. |.+ -..|+++|.++||+|+.++-.
T Consensus 1 MkilVtGat--G~i--G~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLGAT--GRA--GSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEETTT--SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEcCC--CHH--HHHHHHHHHHCCCEEEEEEec
Confidence 456555432 433 367899999999999998753
No 187
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=28.75 E-value=1.1e+02 Score=27.80 Aligned_cols=116 Identities=12% Similarity=0.053 Sum_probs=71.2
Q ss_pred HHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHhhh
Q 012151 300 GFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMC 379 (470)
Q Consensus 300 ~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~ 379 (470)
+-..+++.+++.+.++++..+.. ..+|+.+.+..+.++.-+ ||++ .=...|.+.+..|+.
T Consensus 154 ~~~~~~~~l~~~~~Dlivlagy~--------~il~~~~l~~~~~~~iNi----------HpSl--LP~~rG~~p~~~A~~ 213 (288)
T 3obi_A 154 QEAAITALIAQTHTDLVVLARYM--------QILSDEMSARLAGRCINI----------HHSF--LPGFKGAKPYHQAFD 213 (288)
T ss_dssp HHHHHHHHHHHHTCCEEEESSCC--------SCCCHHHHHHTTTSEEEE----------EEEC--SSCCCSSCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEhhhhh--------hhCCHHHHhhhcCCeEEe----------Cccc--ccCCCCchHHHHHHH
Confidence 34468888888888988888664 458888877665443322 2222 223458899999999
Q ss_pred cCCceecCCCcc--chhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhccchhHHHHHHHHHH
Q 012151 380 EGVPMICQPYLP--DQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVEAEGQEMRARIMHL 442 (470)
Q Consensus 380 ~GvP~v~~P~~~--DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l 442 (470)
+|+...++-.+. +..+-+.-+.+. -+.+...-|.++|.+.+.++-. +-|.+.++.+
T Consensus 214 ~G~~~~G~Tvh~v~~~~D~GpIi~Q~---~v~i~~~dt~~~L~~r~~~~e~----~~l~~av~~~ 271 (288)
T 3obi_A 214 RGVKLIGATAHYVTSALDEGPIIDQD---VERISHRDTPADLVRKGRDIER----RVLSRALHYH 271 (288)
T ss_dssp HTCSEEEEEEEECCSSTTCSCEEEEE---EEECCTTCCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred cCCCEEEEEEEEECCCCcCCCeEEEE---EEecCCCCCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 999998887653 344433333331 1222334578888877765533 3455544443
No 188
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=28.64 E-value=43 Score=28.52 Aligned_cols=33 Identities=18% Similarity=0.222 Sum_probs=24.5
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 14 NGRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 14 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
..++|.++-.+..| ..+|+.|.++||+|+++..
T Consensus 18 ~~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 18 QGMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 56789998755444 5678999999999998754
No 189
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=28.56 E-value=72 Score=30.95 Aligned_cols=42 Identities=14% Similarity=0.261 Sum_probs=36.5
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCc
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFS 56 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~ 56 (470)
+..|+++..++.|-..-+..||..|+++|++|.++..+.+..
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRP 141 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSST
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcch
Confidence 457788888888999999999999999999999999876654
No 190
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=28.45 E-value=53 Score=29.87 Aligned_cols=28 Identities=21% Similarity=0.447 Sum_probs=24.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEE
Q 012151 17 RVILFPLPFQGHINPMLHLASILYSKGFSVTII 49 (470)
Q Consensus 17 ~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~ 49 (470)
||.|+-.+.-| .++|+.|.++||+|+++
T Consensus 7 kIgfIGLG~MG-----~~mA~~L~~~G~~V~v~ 34 (297)
T 4gbj_A 7 KIAFLGLGNLG-----TPIAEILLEAGYELVVW 34 (297)
T ss_dssp EEEEECCSTTH-----HHHHHHHHHTTCEEEEC
T ss_pred cEEEEecHHHH-----HHHHHHHHHCCCeEEEE
Confidence 89999887766 47899999999999874
No 191
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=28.15 E-value=1.7e+02 Score=25.28 Aligned_cols=115 Identities=10% Similarity=0.005 Sum_probs=70.9
Q ss_pred HHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHhhhc
Q 012151 301 FLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMCE 380 (470)
Q Consensus 301 ~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~ 380 (470)
-..+++.+++.+.+++++++.. ..+|+.+.+..+..+.-+ ||++ .=-..|...+..|+.+
T Consensus 90 ~~~~~~~l~~~~~Dliv~agy~--------~IL~~~~l~~~~~~~iNi----------HpSL--LP~yrG~~pi~~Ai~~ 149 (229)
T 3auf_A 90 DAALAERLQAYGVDLVCLAGYM--------RLVRGPMLTAFPNRILNI----------HPSL--LPAFPGLEAQRQALEH 149 (229)
T ss_dssp HHHHHHHHHHTTCSEEEESSCC--------SCCCHHHHHHSTTCEEEE----------ESSC--TTSSCSSCHHHHHHHH
T ss_pred cHHHHHHHHhcCCCEEEEcChh--------HhCCHHHHhhccCCEEEE----------ccCc--CcCCCCcCHHHHHHHc
Confidence 3457888888999998888664 457888876654333222 2333 3334588999999999
Q ss_pred CCceecCCCcc--chhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhccchhHHHHHHHHHH
Q 012151 381 GVPMICQPYLP--DQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVEAEGQEMRARIMHL 442 (470)
Q Consensus 381 GvP~v~~P~~~--DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l 442 (470)
|....++-.+. +..|.+.-+.+. -+ .+..+-|.++|.+.+.++-. +-|.+..+.+
T Consensus 150 G~~~tGvTvh~v~~~~D~G~Ii~Q~-~v--~I~~~dt~~~L~~rl~~~~~----~ll~~~l~~l 206 (229)
T 3auf_A 150 GVKVAGCTVHFVTAGVDEGPIILQA-AV--PVLEGDTVEDLRRRILAEEH----RIYPEAIRLF 206 (229)
T ss_dssp TCSEEEEEEEECCSSTTCSCEEEEE-EE--ECCTTCCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred CCCeEEEEEEEECCCCcCCCEEEEE-EE--ecCCCCCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 99988877553 455544444442 22 22234577888877755422 3455444443
No 192
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=28.04 E-value=87 Score=24.85 Aligned_cols=38 Identities=16% Similarity=0.234 Sum_probs=29.2
Q ss_pred EEEEEcC-CCccChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012151 17 RVILFPL-PFQGHINPMLHLASILYSKGFSVTIIHTDFN 54 (470)
Q Consensus 17 ~il~~~~-~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~ 54 (470)
+++|+.. +..-.+.+.+.+|...++.|++|+++.+..-
T Consensus 9 kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~g 47 (144)
T 2qs7_A 9 KLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWG 47 (144)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHH
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHH
Confidence 4444444 4457888999999999999999999988533
No 193
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=27.89 E-value=77 Score=29.18 Aligned_cols=31 Identities=10% Similarity=0.069 Sum_probs=21.6
Q ss_pred CCcEEEeCCCccchHHHHhhcCCCeEEEecc
Q 012151 122 SPCCLITDAFWFFTHTVAADFKLPTIVLQTC 152 (470)
Q Consensus 122 ~pDlvi~D~~~~~~~~vA~~~giP~v~~~~~ 152 (470)
+||+||..........--++.|+|++.+.+.
T Consensus 116 ~PDLIi~~~~~~~~~~~L~~~gipvv~~~~~ 146 (335)
T 4hn9_A 116 TPDVVFLPMKLKKTADTLESLGIKAVVVNPE 146 (335)
T ss_dssp CCSEEEEEGGGHHHHHHHHHTTCCEEEECCC
T ss_pred CCCEEEEeCcchhHHHHHHHcCCCEEEEcCC
Confidence 9999998754322333446789999998654
No 194
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=27.78 E-value=86 Score=26.82 Aligned_cols=34 Identities=26% Similarity=0.336 Sum_probs=24.5
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTD 52 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 52 (470)
.++|++.-.. |.+ -..|+++|.++||+|+++.-.
T Consensus 21 ~~~ilVtGat--G~i--G~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 21 GMRVLVVGAN--GKV--ARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp CCEEEEETTT--SHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEECCC--ChH--HHHHHHHHHhCCCeEEEEECC
Confidence 4677766433 333 357889999999999998763
No 195
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=27.58 E-value=2e+02 Score=24.63 Aligned_cols=115 Identities=10% Similarity=0.057 Sum_probs=69.0
Q ss_pred HHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHhhhc
Q 012151 301 FLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMCE 380 (470)
Q Consensus 301 ~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~ 380 (470)
-..+++.+++.+.+++++.+.. ..+|+.+.+..+..+.-+ |+++ .=...|...+..|+.+
T Consensus 72 d~~~~~~l~~~~~Dliv~agy~--------~il~~~~l~~~~~~~iNi----------HpSL--LP~yrG~~pi~~Ai~~ 131 (215)
T 3tqr_A 72 ESTLQKTIDHYDPKLIVLAGFM--------RKLGKAFVSHYSGRMINI----------HPSL--LPKYTGLNTHERALAA 131 (215)
T ss_dssp HHHHHHHHHTTCCSEEEESSCC--------SCCCHHHHHHTTTSEEEE----------ESSS--TTTTCSSCHHHHHHHT
T ss_pred HHHHHHHHHhcCCCEEEEccch--------hhCCHHHHhhccCCeEEe----------Cccc--CCCCCChhHHHHHHHc
Confidence 3458888888888988888653 357777766554332222 3333 3334588999999999
Q ss_pred CCceecCCCcc--chhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhccchhHHHHHHHHHH
Q 012151 381 GVPMICQPYLP--DQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVEAEGQEMRARIMHL 442 (470)
Q Consensus 381 GvP~v~~P~~~--DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l 442 (470)
|....++-.+. +..+.+.-+.+. -+.+...-|.++|.+.+.++-. +-|.+..+.+
T Consensus 132 G~~~tGvTvh~v~~~~D~G~Ii~Q~---~v~I~~~dt~~~L~~rl~~~~~----~ll~~~l~~~ 188 (215)
T 3tqr_A 132 GETEHGVSVHYVTEDLDAGPLICQA---RLSITPQDTPETLKTRVHALEH----IIYPEVLSWF 188 (215)
T ss_dssp TCSEEEEEEEECC-CTTCSCEEEEE---EEECCTTCCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred CCCeEEEEEEEEcCCCCCCCEEEEE---EEecCCCCCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 99988877553 444444333332 1222234577888877765422 3455444443
No 196
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=27.43 E-value=58 Score=28.27 Aligned_cols=37 Identities=5% Similarity=-0.023 Sum_probs=28.6
Q ss_pred CCEEEEEcCC--CccChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 15 GRRVILFPLP--FQGHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 15 ~~~il~~~~~--~~GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
+|+.++++.. +-|-..-...|++.|+++|.+|.++-+
T Consensus 3 ~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~KP 41 (228)
T 3of5_A 3 AMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLKP 41 (228)
T ss_dssp TCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEecc
Confidence 4444554444 448999999999999999999999753
No 197
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=27.42 E-value=2.9e+02 Score=23.51 Aligned_cols=103 Identities=13% Similarity=0.160 Sum_probs=57.0
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCC--CeEEEEeCCCC-C-c--ccccccCCCCCeeEEecCCC-CCCCcccccCH
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKG--FSVTIIHTDFN-F-S--STNYFSCNYPHFDFHSFPDG-FSETEASVEDV 87 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rG--h~V~~~~~~~~-~-~--~~~~~~~~~~gi~~~~~~~~-~~~~~~~~~~~ 87 (470)
+.||+++.++. ||. +.+|.+.+.+.+ ++|..+.+... . . ...+ .|+.+..++.. +. +
T Consensus 7 ~~ri~vl~SG~-gsn--l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~-----~gIp~~~~~~~~~~-------~- 70 (209)
T 4ds3_A 7 RNRVVIFISGG-GSN--MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEA-----AGIATQVFKRKDFA-------S- 70 (209)
T ss_dssp CEEEEEEESSC-CHH--HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHH-----TTCCEEECCGGGSS-------S-
T ss_pred CccEEEEEECC-cHH--HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHH-----cCCCEEEeCccccC-------C-
Confidence 36788887776 433 556666775543 68887776321 1 1 2233 68887776521 10 0
Q ss_pred HHHHHHHHhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCc-cchHHHHhhcCCCeEEEecc
Q 012151 88 AVFFTAINGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFW-FFTHTVAADFKLPTIVLQTC 152 (470)
Q Consensus 88 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~-~~~~~vA~~~giP~v~~~~~ 152 (470)
.......+.+.++++ +||++|.-.+. .-...+-..+...++=+.++
T Consensus 71 -------r~~~d~~~~~~l~~~------------~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 117 (209)
T 4ds3_A 71 -------KEAHEDAILAALDVL------------KPDIICLAGYMRLLSGRFIAPYEGRILNIHPS 117 (209)
T ss_dssp -------HHHHHHHHHHHHHHH------------CCSEEEESSCCSCCCHHHHGGGTTCEEEEESS
T ss_pred -------HHHHHHHHHHHHHhc------------CCCEEEEeccccCcCHHHHhhccCCeEEECCc
Confidence 001112333444554 89999987654 44555555565666665544
No 198
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=27.34 E-value=45 Score=29.17 Aligned_cols=33 Identities=30% Similarity=0.269 Sum_probs=27.3
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 14 NGRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 14 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
..|+|.|+-.+..|- .||+.|.++||+|+.+..
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSS
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecC
Confidence 357899999888774 589999999999998665
No 199
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=27.30 E-value=1.2e+02 Score=27.57 Aligned_cols=115 Identities=11% Similarity=0.035 Sum_probs=69.8
Q ss_pred HHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHhhhc
Q 012151 301 FLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMCE 380 (470)
Q Consensus 301 ~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~ 380 (470)
-..+++.+++.+.++++..+.. ..+|+.+.+..+.++.-+ ||++ .=...|.+.+..|+.+
T Consensus 160 ~~~~~~~l~~~~~Dlivla~y~--------~il~~~~l~~~~~~~iNi----------HpSl--LP~~rG~~p~~~Ai~~ 219 (292)
T 3lou_A 160 EAQWLDVFETSGAELVILARYM--------QVLSPEASARLANRAINI----------HHSF--LPGFKGAKPYHQAHAR 219 (292)
T ss_dssp HHHHHHHHHHHTCSEEEESSCC--------SCCCHHHHHHTTTSEEEE----------EEEC--SSCCCSSCHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEecCch--------hhCCHHHHhhhcCCeEEe----------CCCc--CcCCCCccHHHHHHHc
Confidence 3457788888888888887654 457888876665443322 2222 2234588999999999
Q ss_pred CCceecCCCcc--chhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhccchhHHHHHHHHHH
Q 012151 381 GVPMICQPYLP--DQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVEAEGQEMRARIMHL 442 (470)
Q Consensus 381 GvP~v~~P~~~--DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l 442 (470)
|+...++-.+. +..+-+.-+.+. -+.+...-|.++|.+.+.++-. .-|.+.++.+
T Consensus 220 G~~~~G~Tvh~v~~~lD~G~Ii~Q~---~v~i~~~dt~~~L~~r~~~~e~----~~l~~av~~~ 276 (292)
T 3lou_A 220 GVKLIGATAHFVTDDLDEGPIIEQV---VERVDHSYRPEQLLAVGRDVEC----ITLARAVKAF 276 (292)
T ss_dssp TCSEEEEEEEECCSSTTCSCEEEEE---EEECCTTCCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred CCCeEEEEEEEEcCCCcCCCEEEEE---EEEcCCCCCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 99998887653 334433333332 1222334578888877765533 3455444443
No 200
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=27.29 E-value=50 Score=25.50 Aligned_cols=30 Identities=20% Similarity=0.032 Sum_probs=20.7
Q ss_pred CCCcEEEeCCCcc--chHHHHh---hcCCCeEEEe
Q 012151 121 SSPCCLITDAFWF--FTHTVAA---DFKLPTIVLQ 150 (470)
Q Consensus 121 ~~pDlvi~D~~~~--~~~~vA~---~~giP~v~~~ 150 (470)
.+||+||.|...+ .|..+++ ..++|+|.++
T Consensus 52 ~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 52 GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 4899999997664 3444443 4588977754
No 201
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=27.29 E-value=24 Score=30.31 Aligned_cols=32 Identities=28% Similarity=0.371 Sum_probs=24.0
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTD 52 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 52 (470)
|+|+++-+ |.+ -..+|+.|.++||+|+++...
T Consensus 1 M~iiIiG~---G~~--G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGG---ETT--AYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEECC---HHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECC---CHH--HHHHHHHHHhCCCeEEEEECC
Confidence 45777754 333 457899999999999998863
No 202
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=27.16 E-value=71 Score=28.36 Aligned_cols=32 Identities=25% Similarity=0.339 Sum_probs=24.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTD 52 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 52 (470)
++|++.- + |- --..|++.|.++||+|+.+.-.
T Consensus 4 ~~ilVtG--a-G~--iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 4 SKILIAG--C-GD--LGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCEEEEC--C-SH--HHHHHHHHHHHTTCCEEEEECT
T ss_pred CcEEEEC--C-CH--HHHHHHHHHHHCCCEEEEEeCC
Confidence 4677773 4 63 3457899999999999998764
No 203
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=26.93 E-value=1.6e+02 Score=25.22 Aligned_cols=114 Identities=10% Similarity=0.049 Sum_probs=69.1
Q ss_pred HHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHhhhcC
Q 012151 302 LEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMCEG 381 (470)
Q Consensus 302 ~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~G 381 (470)
..+++.+++.+.++++..+.. ..+|+.+.+..+..+.-+ ||++ .=...|...+..|+.+|
T Consensus 72 ~~~~~~L~~~~~Dlivlagy~--------~IL~~~~l~~~~~~~iNi----------HpSL--LP~yrG~~pi~~Ai~~G 131 (215)
T 3kcq_A 72 EHISTVLREHDVDLVCLAGFM--------SILPEKFVTDWHHKIINI----------HPSL--LPSFKGLNAQEQAYKAG 131 (215)
T ss_dssp HHHHHHHHHTTCSEEEESSCC--------SCCCHHHHHHTTTSEEEE----------ESSC--TTTTCSSCHHHHHHHHT
T ss_pred HHHHHHHHHhCCCEEEEeCCc--------eEeCHHHHhhccCCeEEE----------Cccc--ccCCCCccHHHHHHHcC
Confidence 457778888888888887653 457787766554332222 3443 33446889999999999
Q ss_pred CceecCCCcc--chhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhccchhHHHHHHHHHH
Q 012151 382 VPMICQPYLP--DQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVEAEGQEMRARIMHL 442 (470)
Q Consensus 382 vP~v~~P~~~--DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l 442 (470)
+...++-.+. +..+-+.-+.+. - +.+...-|.++|.+.+.++-. +-|.+..+.+
T Consensus 132 ~~~tGvTvh~v~~~lD~G~Ii~Q~-~--v~I~~~dt~~~L~~rl~~~e~----~ll~~~l~~~ 187 (215)
T 3kcq_A 132 VKIAGCTLHYVYQELDAGPIIMQA-A--VPVLREDTAESLASRILAAEH----VCYPKGVKLI 187 (215)
T ss_dssp CSEEEEEEEECCSSTTCSCEEEEE-E--EECCTTCCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred CCeEEEEEEEEcCCCCCCCEEEEE-E--eecCCCCCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 9988877653 444444433332 1 222334577888877755422 3455444443
No 204
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=26.85 E-value=58 Score=29.86 Aligned_cols=34 Identities=15% Similarity=0.140 Sum_probs=28.1
Q ss_pred CEEEEEcCCCc--cChHHHHHHHHHHHhCCCeEEEEeCC
Q 012151 16 RRVILFPLPFQ--GHINPMLHLASILYSKGFSVTIIHTD 52 (470)
Q Consensus 16 ~~il~~~~~~~--GH~~p~l~La~~L~~rGh~V~~~~~~ 52 (470)
.+|++++.++- |+ -+.+|+.|+.+|++|+++...
T Consensus 133 ~~vlVlcG~GNNGGD---Glv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQ---GISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCcEEEEEec
Confidence 48999999875 44 378999999999999998664
No 205
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=26.60 E-value=75 Score=24.12 Aligned_cols=63 Identities=8% Similarity=-0.067 Sum_probs=43.6
Q ss_pred cCCcceeecccCchh---------hHHhhhcCCceecCCCccchhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhc
Q 012151 359 HPAVGGFWTHSGWNS---------TLESMCEGVPMICQPYLPDQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMV 428 (470)
Q Consensus 359 ~~~~~~~I~HGG~gs---------~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~ 428 (470)
.+++ +|--.|..| +-.|...|+|+|++=-++.+. .-..+++. +. .+- ..+.+.|.++|+..++
T Consensus 38 ~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~-a~--~iV-~Wn~~~I~~aI~~~~~ 109 (111)
T 1eiw_A 38 DADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAV-SS--EVV-GWNPHCIRDALEDALD 109 (111)
T ss_dssp SCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHH-CS--EEE-CSCHHHHHHHHHHHHC
T ss_pred cCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhh-Cc--eec-cCCHHHHHHHHHhccC
Confidence 4666 999999888 567889999999998877651 11224442 21 122 3788999999988754
No 206
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=26.49 E-value=1.4e+02 Score=27.03 Aligned_cols=116 Identities=9% Similarity=0.032 Sum_probs=69.8
Q ss_pred HHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHhhh
Q 012151 300 GFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMC 379 (470)
Q Consensus 300 ~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~ 379 (470)
+-..+++.+++.+.++++..+.. ..+|+.+.+..+.++.-+ ||++ .=...|.+.+..|+.
T Consensus 154 ~~~~~~~~l~~~~~Dlivla~y~--------~il~~~~l~~~~~~~iNi----------HpSl--LP~~rG~~p~~~Ai~ 213 (286)
T 3n0v_A 154 QERKVLQVIEETGAELVILARYM--------QVLSPELCRRLDGWAINI----------HHSL--LPGFKGAKPYHQAYN 213 (286)
T ss_dssp HHHHHHHHHHHHTCSEEEESSCC--------SCCCHHHHHHTTTSEEEE----------EECS--STTCCCSCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEecccc--------cccCHHHHhhhcCCeEEe----------cccc--ccCCCCccHHHHHHH
Confidence 33457788888888888887654 457888876665443322 2232 223458899999999
Q ss_pred cCCceecCCCcc--chhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhccchhHHHHHHHHHH
Q 012151 380 EGVPMICQPYLP--DQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVEAEGQEMRARIMHL 442 (470)
Q Consensus 380 ~GvP~v~~P~~~--DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l 442 (470)
+|+...++-.+. +..+-+.-+.+. -+.+...-|.++|.+.+.++-. .-|.+.++.+
T Consensus 214 ~G~~~~G~Tvh~v~~~lD~GpIi~Q~---~~~i~~~dt~~~L~~r~~~~e~----~~l~~av~~~ 271 (286)
T 3n0v_A 214 KGVKMVGATAHYINNDLDEGPIIAQG---VEVVDHSHYPEDLIAKGRDIEC----LTLARAVGYH 271 (286)
T ss_dssp HTCSEEEEEEEECCSSTTCSCEEEEE---EEECCTTCCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred cCCCeEEEEEEEEcCCCCCCceeEEE---EEEcCCCCCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 999998887653 333333333331 1222224578888877765533 3455544443
No 207
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=26.47 E-value=42 Score=32.98 Aligned_cols=55 Identities=18% Similarity=0.192 Sum_probs=36.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccCCCCCeeEEecC--CCCCCC
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTNYFSCNYPHFDFHSFP--DGFSET 80 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~gi~~~~~~--~~~~~~ 80 (470)
++-++++. .+=.-++.+|+.|.+.|+++. ++......... .|+.+..+. .++|+-
T Consensus 10 i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e-----~GI~v~~V~~vTgfPEi 66 (523)
T 3zzm_A 10 IRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTIAD-----TGIPVTPVEQLTGFPEV 66 (523)
T ss_dssp CCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHT-----TTCCCEEHHHHHSCCCC
T ss_pred ccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHHHH-----cCCceeeccccCCCchh
Confidence 33444444 344558899999999998875 45555566655 788877764 355553
No 208
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=26.29 E-value=4.1e+02 Score=26.18 Aligned_cols=33 Identities=21% Similarity=0.303 Sum_probs=22.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTD 52 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 52 (470)
..+++++. .-.-.+.|++.|.+-|.+|..+.+.
T Consensus 364 GKrvaI~g-----d~~~~~~la~fL~elGm~vv~v~~~ 396 (523)
T 3u7q_B 364 GKRFALWG-----DPDFVMGLVKFLLELGCEPVHILCH 396 (523)
T ss_dssp TCEEEEEC-----SHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHcCCEEEEEEeC
Confidence 34777762 3334567778888889888877664
No 209
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=26.14 E-value=1.2e+02 Score=27.52 Aligned_cols=81 Identities=7% Similarity=-0.091 Sum_probs=47.1
Q ss_pred EEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcce
Q 012151 285 VVYISFGSVIAINKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGG 364 (470)
Q Consensus 285 ~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~ 364 (470)
.++++--|......+.+..+...|++.+..+.+.... -+....+ +. . ++....+ +
T Consensus 12 ~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~-----------~~~~a~~-------~~---~--~~~~~~d--~ 66 (304)
T 3s40_A 12 LLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTK-----------EQGDATK-------YC---Q--EFASKVD--L 66 (304)
T ss_dssp EEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECC-----------STTHHHH-------HH---H--HHTTTCS--E
T ss_pred EEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEcc-----------CcchHHH-------HH---H--HhhcCCC--E
Confidence 4555543333223455667778888777776555422 1111110 00 0 1112234 4
Q ss_pred eecccCchhhHHhhh------cCCceecCCCc
Q 012151 365 FWTHSGWNSTLESMC------EGVPMICQPYL 390 (470)
Q Consensus 365 ~I~HGG~gs~~eal~------~GvP~v~~P~~ 390 (470)
+|.-||-||+.|++. .++|+.++|..
T Consensus 67 vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~G 98 (304)
T 3s40_A 67 IIVFGGDGTVFECTNGLAPLEIRPTLAIIPGG 98 (304)
T ss_dssp EEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred EEEEccchHHHHHHHHHhhCCCCCcEEEecCC
Confidence 999999999999864 57999999974
No 210
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=25.79 E-value=56 Score=29.80 Aligned_cols=46 Identities=15% Similarity=0.158 Sum_probs=32.7
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccCCCCCeeEEe
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSSTNYFSCNYPHFDFHS 72 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~gi~~~~ 72 (470)
++|+++-.++.| ..+|..|.+.||+|+++.... .+.+.+ .|+....
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~~-~~~i~~-----~g~~~~~ 48 (312)
T 3hn2_A 3 LRIAIVGAGALG-----LYYGALLQRSGEDVHFLLRRD-YEAIAG-----NGLKVFS 48 (312)
T ss_dssp -CEEEECCSTTH-----HHHHHHHHHTSCCEEEECSTT-HHHHHH-----TCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcCc-HHHHHh-----CCCEEEc
Confidence 479999887776 346888999999999988754 333433 5666654
No 211
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=25.71 E-value=2.9e+02 Score=25.25 Aligned_cols=109 Identities=13% Similarity=0.084 Sum_probs=60.1
Q ss_pred EEEEEcCcccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcc
Q 012151 285 VVYISFGSVIAINKDGFLEIAWGVANS-RMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVG 363 (470)
Q Consensus 285 ~I~vs~Gs~~~~~~~~~~~i~~al~~~-~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~ 363 (470)
+.+|..|.+.. .++.++.+. +..++.++..+. + .-+.+.++.+ ...-+-+..+++..++++
T Consensus 5 vgiIG~G~~g~-------~~~~~l~~~~~~~l~av~d~~~-------~-~~~~~~~~~~---~~~~~~~~~~ll~~~~~D 66 (344)
T 3ezy_A 5 IGVIGLGRIGT-------IHAENLKMIDDAILYAISDVRE-------D-RLREMKEKLG---VEKAYKDPHELIEDPNVD 66 (344)
T ss_dssp EEEECCSHHHH-------HHHHHGGGSTTEEEEEEECSCH-------H-HHHHHHHHHT---CSEEESSHHHHHHCTTCC
T ss_pred EEEEcCCHHHH-------HHHHHHHhCCCcEEEEEECCCH-------H-HHHHHHHHhC---CCceeCCHHHHhcCCCCC
Confidence 66777777652 366677665 445555553321 0 0011222211 112456778899876777
Q ss_pred eeecccCch----hhHHhhhcCCceecC-CCcc--ch-hhhHHHHHhhhheeEEcCC
Q 012151 364 GFWTHSGWN----STLESMCEGVPMICQ-PYLP--DQ-MVNARYVSHFWRVGLHSEW 412 (470)
Q Consensus 364 ~~I~HGG~g----s~~eal~~GvP~v~~-P~~~--DQ-~~na~rv~~~~G~G~~l~~ 412 (470)
+++--.-.. .+.+|+.+|+++++= |+.. ++ ..-....+++ |+-+.+..
T Consensus 67 ~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a~~~-g~~~~v~~ 122 (344)
T 3ezy_A 67 AVLVCSSTNTHSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKKA-DVILFTGF 122 (344)
T ss_dssp EEEECSCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHH-TCCEEEEC
T ss_pred EEEEcCCCcchHHHHHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHHh-CCcEEEee
Confidence 687655544 467789999998863 6543 22 2233445553 76655544
No 212
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=25.69 E-value=2.3e+02 Score=24.06 Aligned_cols=115 Identities=13% Similarity=0.073 Sum_probs=71.0
Q ss_pred HHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHhhhc
Q 012151 301 FLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMCE 380 (470)
Q Consensus 301 ~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~ 380 (470)
-..+++.+++.+.+++++.+.. ..+|+.+.+..+..+.-+ ||++ .=...|...+..|+.+
T Consensus 71 ~~~~~~~l~~~~~Dliv~a~y~--------~il~~~~l~~~~~~~iNi----------HpSL--LP~yrG~~pi~~Ai~~ 130 (212)
T 3av3_A 71 ESEILRELKGRQIDWIALAGYM--------RLIGPTLLSAYEGKIVNI----------HPSL--LPAFPGKDAIGQAYRA 130 (212)
T ss_dssp HHHHHHHHHHTTCCEEEESSCC--------SCCCHHHHHHTTTCEEEE----------ESSC--TTSSCSTTHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEchhh--------hhCCHHHHhhhcCCEEEE----------ecCc--CCCCCCcCHHHHHHHc
Confidence 3458888889999998888654 457888766654332222 3443 3344688999999999
Q ss_pred CCceecCCCcc--chhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhccchhHHHHHHHHHH
Q 012151 381 GVPMICQPYLP--DQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVEAEGQEMRARIMHL 442 (470)
Q Consensus 381 GvP~v~~P~~~--DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l 442 (470)
|....++-.+. +..|.+.-+.+. -+ .+..+-|.++|.+.+..+-. +-|.+..+.+
T Consensus 131 G~~~tGvTvh~v~~~~D~G~Ii~Q~-~v--~I~~~dt~~~L~~r~~~~~~----~ll~~~l~~~ 187 (212)
T 3av3_A 131 GVSETGVTVHYVDEGMDTGPVIAQR-VV--PIVPGEPIEALEERIHQVEH----ELYPTVLRML 187 (212)
T ss_dssp TCSEEEEEEEECCSSSSCSCEEEEE-EE--ECCTTCCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred CCCeEEEEEEEECCCCCCCCEEEEE-EE--ecCCCCCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 99988877653 444444433332 21 22224577888877755422 3555555444
No 213
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=25.58 E-value=72 Score=27.55 Aligned_cols=32 Identities=13% Similarity=-0.007 Sum_probs=23.3
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 17 RVILFPLPFQGHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 17 ~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
+.++++..+.| --.++|+.|.++|++|+++.-
T Consensus 8 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 39 (241)
T 1dhr_A 8 RRVLVYGGRGA---LGSRCVQAFRARNWWVASIDV 39 (241)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHTTTCEEEEEES
T ss_pred CEEEEECCCcH---HHHHHHHHHHhCCCEEEEEeC
Confidence 45566655532 346899999999999998764
No 214
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=25.56 E-value=1.4e+02 Score=25.20 Aligned_cols=33 Identities=21% Similarity=0.452 Sum_probs=23.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTD 52 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 52 (470)
++|++.-. .|.+- ..|++.|.++||+|+.+.-.
T Consensus 5 ~~ilItGa--tG~iG--~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 5 KKIVLIGA--SGFVG--SALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CEEEEETC--CHHHH--HHHHHHHHTTTCEEEEECSC
T ss_pred CEEEEEcC--CchHH--HHHHHHHHHCCCEEEEEEcC
Confidence 46766633 34333 57899999999999998764
No 215
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=25.56 E-value=3.8e+02 Score=28.29 Aligned_cols=76 Identities=9% Similarity=-0.002 Sum_probs=41.4
Q ss_pred eecccCchhhHHhhhcC-C--ceec--CCCccchhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhccchhHHHHHHH
Q 012151 365 FWTHSGWNSTLESMCEG-V--PMIC--QPYLPDQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVEAEGQEMRARI 439 (470)
Q Consensus 365 ~I~HGG~gs~~eal~~G-v--P~v~--~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a 439 (470)
|+.||--+.+.|.++-. . |+-+ +|-.++--.-...++.. .++++.|.+++.+++....+..++++.
T Consensus 727 ~~~gGlgsaV~ell~~r~~~~~l~v~G~~d~G~tgtp~eLl~~~---------gld~~~Iv~~a~~~l~~~~~~~~~~~~ 797 (845)
T 3ahc_A 727 FAYHSYAQDVRGLIYDRPNHDNFHVVGYKEQGSTTTPFDMVRVN---------DMDRYALQAAALKLIDADKYADKIDEL 797 (845)
T ss_dssp EEESSCHHHHHHHTTTSTTGGGEEEECCCSCCCSCCHHHHHHTT---------TCSHHHHHHHHHHHHHTTTTHHHHHHH
T ss_pred eeecCcHHHHHHHHHhCCCCceEEEEeccCCCCCCCHHHHHHHh---------CcCHHHHHHHHHHHcchhhHHHHHHHH
Confidence 55677777777777765 3 3333 33322111112222221 489999999998888743334555555
Q ss_pred HHHHHHHHHH
Q 012151 440 MHLKEKVDFC 449 (470)
Q Consensus 440 ~~l~~~~~~~ 449 (470)
+....+.++-
T Consensus 798 ~~~~~~~~~~ 807 (845)
T 3ahc_A 798 NAFRKKAFQF 807 (845)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5554444443
No 216
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=25.56 E-value=74 Score=24.90 Aligned_cols=47 Identities=4% Similarity=0.008 Sum_probs=35.0
Q ss_pred cCCceecCCCccchhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhc
Q 012151 380 EGVPMICQPYLPDQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMV 428 (470)
Q Consensus 380 ~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~ 428 (470)
..+|+|.+--..+.. ...+..+ .|+--.+.+.++.++|.++|++++.
T Consensus 86 ~~ipvI~lTa~~~~~-~~~~~~~-~Ga~~yl~KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 86 KHLPVLMITAEAKRE-QIIEAAQ-AGVNGYIVKPFTAATLKEKLDKIFE 132 (134)
T ss_dssp TTCCEEEEESSCCHH-HHHHHHH-TTCCEEEESSCCHHHHHHHHHHHCC
T ss_pred CCCeEEEEECCCCHH-HHHHHHH-CCCCEEEECCCCHHHHHHHHHHHHh
Confidence 468988887665544 4455556 4887777766999999999999875
No 217
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=25.55 E-value=62 Score=28.84 Aligned_cols=34 Identities=15% Similarity=0.140 Sum_probs=28.0
Q ss_pred CEEEEEcCCCc--cChHHHHHHHHHHHhCCCeEEEEeCC
Q 012151 16 RRVILFPLPFQ--GHINPMLHLASILYSKGFSVTIIHTD 52 (470)
Q Consensus 16 ~~il~~~~~~~--GH~~p~l~La~~L~~rGh~V~~~~~~ 52 (470)
.+|++++.++. |+ -+.+|+.|+.+|++|+++...
T Consensus 86 ~~vlVlcG~GNNGGD---Glv~AR~L~~~G~~V~v~~~~ 121 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQ---GISCGRHLANHDVQVILFLPN 121 (259)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCB
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCeEEEEEec
Confidence 38999998875 34 378999999999999998653
No 218
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=25.54 E-value=54 Score=28.95 Aligned_cols=33 Identities=21% Similarity=0.232 Sum_probs=27.5
Q ss_pred CEEEEEcCCCc--cChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 16 RRVILFPLPFQ--GHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 16 ~~il~~~~~~~--GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
.+|++++.++- |+ -+.+|+.|+.+|++|+++..
T Consensus 59 ~~v~VlcG~GNNGGD---Glv~AR~L~~~G~~V~v~~~ 93 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGD---GLVCARHLKLFGYNPVVFYP 93 (246)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCCEEEECC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCeEEEEEc
Confidence 38999998875 34 37899999999999999865
No 219
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=25.39 E-value=2.4e+02 Score=24.11 Aligned_cols=103 Identities=13% Similarity=0.139 Sum_probs=64.7
Q ss_pred HHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHhhhc
Q 012151 301 FLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMCE 380 (470)
Q Consensus 301 ~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~ 380 (470)
-..+++.+++.+.+++++.+.. ..+|+.+.+..+..+.-+ |+++ .=-..|...+..|+.+
T Consensus 70 d~~~~~~l~~~~~Dliv~agy~--------~Il~~~~l~~~~~~~iNi----------HpSL--LP~yrG~~pi~~Ai~~ 129 (211)
T 3p9x_A 70 EIEVVQQLKEKQIDFVVLAGYM--------RLVGPTLLGAYEGRIVNI----------HPSL--LPAFPGLHAIEQAIRA 129 (211)
T ss_dssp HHHHHHHHHHTTCCEEEESSCC--------SCCCHHHHHHHTTSEEEE----------ESSC--TTSSCSSCHHHHHHHT
T ss_pred HHHHHHHHHhcCCCEEEEeCch--------hhcCHHHHhhccCCeEEE----------CCcc--CCCCCCccHHHHHHHc
Confidence 3468888999999998888664 457888876654433322 2333 3333588999999999
Q ss_pred CCceecCCCcc--chhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHH
Q 012151 381 GVPMICQPYLP--DQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRV 426 (470)
Q Consensus 381 GvP~v~~P~~~--DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~v 426 (470)
|....++-.+. +..|.+..+.+. - +.+...-|.++|.+.+.++
T Consensus 130 G~~~tGvTvh~v~~~~D~G~Ii~Q~-~--v~I~~~dt~~~L~~rl~~~ 174 (211)
T 3p9x_A 130 NVKVTGVTIHYVDEGMDTGPIIAQE-A--VSIEEEDTLETLTTKIQAV 174 (211)
T ss_dssp TCSEEEEEEEECCSSSSCSCEEEEE-E--EECCTTCCHHHHHHHHHHH
T ss_pred CCCeEEEEEEEEcCCCCCCCEEEEE-E--EecCCCCCHHHHHHHHHHH
Confidence 99988877553 444444433332 1 2222245777777776553
No 220
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=25.39 E-value=1.1e+02 Score=24.10 Aligned_cols=43 Identities=14% Similarity=0.238 Sum_probs=28.2
Q ss_pred CEEEEE-cCCCccC--hHHHHHHHHHHHhCCCeE-EEEeCCCCCccc
Q 012151 16 RRVILF-PLPFQGH--INPMLHLASILYSKGFSV-TIIHTDFNFSST 58 (470)
Q Consensus 16 ~~il~~-~~~~~GH--~~p~l~La~~L~~rGh~V-~~~~~~~~~~~~ 58 (470)
|+++|+ ..+.+|+ ..-.+.+|+.+.+.||+| .++-.....-..
T Consensus 13 ~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~DGV~~a 59 (140)
T 2d1p_A 13 MRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYREGVYNA 59 (140)
T ss_dssp CEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGGGGGGG
T ss_pred eEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEechHHHHH
Confidence 445544 4444564 444688999999999999 887765443333
No 221
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=25.33 E-value=73 Score=28.50 Aligned_cols=42 Identities=26% Similarity=0.177 Sum_probs=34.0
Q ss_pred CCEEEEEcCCCc---cChHHHHHHHHHHHhCCCeEEEEeCCCCCc
Q 012151 15 GRRVILFPLPFQ---GHINPMLHLASILYSKGFSVTIIHTDFNFS 56 (470)
Q Consensus 15 ~~~il~~~~~~~---GH~~p~l~La~~L~~rGh~V~~~~~~~~~~ 56 (470)
.|+.+|++.+.- |-=.-.-.|+..|.+||++|+..--+.+..
T Consensus 22 ~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYlN 66 (295)
T 2vo1_A 22 SMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYIN 66 (295)
T ss_dssp CCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSSC
T ss_pred cceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeeccccee
Confidence 589999998744 566778899999999999999987755543
No 222
>2a3d_A Protein (de novo three-helix bundle); NMR {Synthetic construct} SCOP: k.9.1.1
Probab=25.28 E-value=69 Score=20.64 Aligned_cols=31 Identities=23% Similarity=0.412 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 012151 433 QEMRARIMHLKEKVDFCLRKGGSSHQSLERLIDHI 467 (470)
Q Consensus 433 ~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~l 467 (470)
..|+++...++..++.. |||...+..+...+
T Consensus 5 aefkqrlaaiktrlqal----ggseaelaafekei 35 (73)
T 2a3d_A 5 AEFKQRLAAIKTRLQAL----GGSEAELAAFEKEI 35 (73)
T ss_dssp HHHHHHHHHHHHHHHHC----SSGGGTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh----cCcHHHHHHHHHHH
Confidence 46888888888888877 77776665555443
No 223
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=25.25 E-value=56 Score=27.01 Aligned_cols=33 Identities=18% Similarity=0.138 Sum_probs=25.7
Q ss_pred EEEEEcCCCccChHH-HHHHHHHHHhCCCeEEEEeCC
Q 012151 17 RVILFPLPFQGHINP-MLHLASILYSKGFSVTIIHTD 52 (470)
Q Consensus 17 ~il~~~~~~~GH~~p-~l~La~~L~~rGh~V~~~~~~ 52 (470)
++++++..+ .|| .+.+|++++++|+.|..+++.
T Consensus 80 ~vii~S~Sg---~n~~~ie~A~~ake~G~~vIaITs~ 113 (170)
T 3jx9_A 80 RVLIFTPDT---ERSDLLASLARYDAWHTPYSIITLG 113 (170)
T ss_dssp EEEEEESCS---CCHHHHHHHHHHHHHTCCEEEEESS
T ss_pred EEEEEeCCC---CCHHHHHHHHHHHHCCCcEEEEeCc
Confidence 455555544 245 899999999999999999993
No 224
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=25.13 E-value=2.9e+02 Score=24.99 Aligned_cols=94 Identities=10% Similarity=0.059 Sum_probs=0.0
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCcc-----------cccccCCCCCeeEEecCCCCCCCcccc
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDFNFSS-----------TNYFSCNYPHFDFHSFPDGFSETEASV 84 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~-----------~~~~~~~~~gi~~~~~~~~~~~~~~~~ 84 (470)
|||+|+..+. ......+.|.++||+|..+.+...... ..+ .|+.+....+.-.
T Consensus 1 mrivf~gt~~-----fa~~~L~~L~~~~~~i~~Vvt~~d~~~g~~~~~~v~~~A~~-----~gIpv~~~~~~~~------ 64 (305)
T 2bln_A 1 MKTVVFAYHD-----MGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAE-----RGIPVYAPDNVNH------ 64 (305)
T ss_dssp CEEEEEECHH-----HHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHH-----HTCCEECCSCCCS------
T ss_pred CEEEEEEcCH-----HHHHHHHHHHHCCCcEEEEEcCCCCCCCCcCccHHHHHHHH-----cCCCEECCCcCCc------
Q ss_pred cCHHHHHHHHHhhcchHHHHHHHHHHhcccCCCCCCCCCcEEEeCCCc-cchHHHHhhcCCCeEEEecc
Q 012151 85 EDVAVFFTAINGKCIMPFRDCLAEILMKSKADQNKDSSPCCLITDAFW-FFTHTVAADFKLPTIVLQTC 152 (470)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvi~D~~~-~~~~~vA~~~giP~v~~~~~ 152 (470)
+.+.+.++++ +||++|+-.+. .-...+-......++-+.++
T Consensus 65 ---------------~~~~~~l~~~------------~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpS 106 (305)
T 2bln_A 65 ---------------PLWVERIAQL------------SPDVIFSFYYRHLIYDEILQLAPAGAFNLHGS 106 (305)
T ss_dssp ---------------HHHHHHHHHT------------CCSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred ---------------HHHHHHHHhc------------CCCEEEEeccccccCHHHHhcCcCCEEEecCC
No 225
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=24.97 E-value=1.3e+02 Score=21.67 Aligned_cols=33 Identities=6% Similarity=0.019 Sum_probs=24.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
...|+++|..+ ......+..|.+.|++|..+..
T Consensus 56 ~~~ivvyC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (100)
T 3foj_A 56 NETYYIICKAG----GRSAQVVQYLEQNGVNAVNVEG 88 (100)
T ss_dssp TSEEEEECSSS----HHHHHHHHHHHTTTCEEEEETT
T ss_pred CCcEEEEcCCC----chHHHHHHHHHHCCCCEEEecc
Confidence 35789998554 3467788999999998877654
No 226
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=24.96 E-value=64 Score=29.03 Aligned_cols=37 Identities=5% Similarity=0.140 Sum_probs=28.0
Q ss_pred CEEEEEcCCCcc---ChHHHHHHHHHHHhCCCeEEEEeCC
Q 012151 16 RRVILFPLPFQG---HINPMLHLASILYSKGFSVTIIHTD 52 (470)
Q Consensus 16 ~~il~~~~~~~G---H~~p~l~La~~L~~rGh~V~~~~~~ 52 (470)
|+|+++..+... .......++++|.++||+|.++.+.
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 379999887532 1244578999999999999998764
No 227
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=24.85 E-value=3.9e+02 Score=24.23 Aligned_cols=109 Identities=15% Similarity=0.202 Sum_probs=61.2
Q ss_pred eEEEEEcCcccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCc
Q 012151 284 SVVYISFGSVIAINKDGFLEIAWGVANS-RMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAV 362 (470)
Q Consensus 284 ~~I~vs~Gs~~~~~~~~~~~i~~al~~~-~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~ 362 (470)
.+.+|..|.+.. .++.++.+. +..++.++..+ ++...+-..... ..-+-...+++..+++
T Consensus 6 rvgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~-----------~~~~~~~a~~~g-~~~~~~~~~~l~~~~~ 66 (344)
T 3euw_A 6 RIALFGAGRIGH-------VHAANIAANPDLELVVIADPF-----------IEGAQRLAEANG-AEAVASPDEVFARDDI 66 (344)
T ss_dssp EEEEECCSHHHH-------HHHHHHHHCTTEEEEEEECSS-----------HHHHHHHHHTTT-CEEESSHHHHTTCSCC
T ss_pred EEEEECCcHHHH-------HHHHHHHhCCCcEEEEEECCC-----------HHHHHHHHHHcC-CceeCCHHHHhcCCCC
Confidence 467788887752 355666665 45555555322 222211111111 3345677889986666
Q ss_pred ceeecccCch----hhHHhhhcCCceec-CCCcc--ch-hhhHHHHHhhhheeEEcCC
Q 012151 363 GGFWTHSGWN----STLESMCEGVPMIC-QPYLP--DQ-MVNARYVSHFWRVGLHSEW 412 (470)
Q Consensus 363 ~~~I~HGG~g----s~~eal~~GvP~v~-~P~~~--DQ-~~na~rv~~~~G~G~~l~~ 412 (470)
++++.---.. .+.+|+.+|+++++ -|+.. ++ ..-...++++ |+-+.+..
T Consensus 67 D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~-g~~~~v~~ 123 (344)
T 3euw_A 67 DGIVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDG-ASKVMLGF 123 (344)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGG-GGGEEECC
T ss_pred CEEEEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhc-CCeEEecc
Confidence 6677655544 36778999999887 35543 22 2233455553 76666554
No 228
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=24.85 E-value=23 Score=34.72 Aligned_cols=59 Identities=10% Similarity=-0.022 Sum_probs=37.2
Q ss_pred ceeecccCc-----hhhHHhhhcCCceecCCCccchhhhHHHHHhhhheeEEcCC-cccHHHHHHHHH
Q 012151 363 GGFWTHSGW-----NSTLESMCEGVPMICQPYLPDQMVNARYVSHFWRVGLHSEW-KLERMEIERAIR 424 (470)
Q Consensus 363 ~~~I~HGG~-----gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~-~~~~~~l~~ai~ 424 (470)
++||.=-|. -+.+-|=..|++-++. ....+.+...++. +|+...+.+ ..+...|.+.++
T Consensus 302 D~~ia~T~~De~Ni~~~llAk~~gv~kvIa--~vn~~~~~~l~~~-~gid~visp~~~~a~~I~~~i~ 366 (461)
T 4g65_A 302 DVFIALTNEDETNIMSAMLAKRMGAKKVMV--LIQRGAYVDLVQG-GVIDVAISPQQATISALLTHVR 366 (461)
T ss_dssp SEEEECCSCHHHHHHHHHHHHHTTCSEEEE--ECSCHHHHHHHCS-SSSCEEECHHHHHHHHHHHHHH
T ss_pred cEEEEcccCcHHHHHHHHHHHHcCCccccc--cccccchhhhhhc-cccceeeCHHHHHHHHHHHHhh
Confidence 336665552 2455556677776665 3345666677777 688877777 566666666665
No 229
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=24.80 E-value=2.2e+02 Score=24.21 Aligned_cols=115 Identities=11% Similarity=0.024 Sum_probs=69.6
Q ss_pred HHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHhhhc
Q 012151 301 FLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMCE 380 (470)
Q Consensus 301 ~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~ 380 (470)
-..+++.+++.+.+++++.+.. ..+|+.+.+..+..+.-+ |+++ .=...|...+..|+.+
T Consensus 68 ~~~~~~~l~~~~~Dliv~agy~--------~il~~~~l~~~~~~~iNi----------HpSl--LP~yrG~~pi~~ai~~ 127 (212)
T 1jkx_A 68 DRELIHEIDMYAPDVVVLAGFM--------RILSPAFVSHYAGRLLNI----------HPSL--LPKYPGLHTHRQALEN 127 (212)
T ss_dssp HHHHHHHHGGGCCSEEEESSCC--------SCCCHHHHHHTTTSEEEE----------ESSC--TTSCCSSCHHHHHHHT
T ss_pred cHHHHHHHHhcCCCEEEEeChh--------hhCCHHHHhhccCCEEEE----------ccCc--ccCCCCccHHHHHHHc
Confidence 3457888888888988888653 357787766554332222 3333 3334588999999999
Q ss_pred CCceecCCCcc--chhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhccchhHHHHHHHHHH
Q 012151 381 GVPMICQPYLP--DQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVEAEGQEMRARIMHL 442 (470)
Q Consensus 381 GvP~v~~P~~~--DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l 442 (470)
|...-++-.+. +..+.+.-+.+. -+ .+...-|.++|.+.+.++-. +-|.+..+.+
T Consensus 128 G~~~tGvTvh~v~~~~D~G~Ii~Q~-~v--~I~~~dt~~~L~~rl~~~~~----~ll~~~l~~~ 184 (212)
T 1jkx_A 128 GDEEHGTSVHFVTDELDGGPVILQA-KV--PVFAGDSEDDITARVQTQEH----AIYPLVISWF 184 (212)
T ss_dssp TCSEEEEEEEECCSSTTCSCEEEEE-EE--ECCTTCCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred CCCceEEEEEEEcccccCCCEEEEE-EE--EcCCCCCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 99988877653 444444433332 21 22234577888777755422 3455544444
No 230
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=24.76 E-value=1.5e+02 Score=25.32 Aligned_cols=115 Identities=9% Similarity=0.036 Sum_probs=68.9
Q ss_pred HHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHhhhc
Q 012151 301 FLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMCE 380 (470)
Q Consensus 301 ~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~ 380 (470)
-..+++.+++.+.+++++.+.. ..+|+.+.+..+..+.-+ |+++ .=...|...+..|+.+
T Consensus 75 d~~~~~~l~~~~~Dliv~agy~--------~il~~~~l~~~~~~~iNi----------HpSL--LP~yrG~~pi~~Ai~~ 134 (209)
T 4ds3_A 75 EDAILAALDVLKPDIICLAGYM--------RLLSGRFIAPYEGRILNI----------HPSL--LPLFPGLHTHQRALDA 134 (209)
T ss_dssp HHHHHHHHHHHCCSEEEESSCC--------SCCCHHHHGGGTTCEEEE----------ESSC--TTSSCSSCHHHHHHHT
T ss_pred HHHHHHHHHhcCCCEEEEeccc--------cCcCHHHHhhccCCeEEE----------CCcc--ccCCCChhHHHHHHHc
Confidence 3568888888899998888654 357777765443322211 3444 3445688999999999
Q ss_pred CCceecCCCcc--chhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhccchhHHHHHHHHHH
Q 012151 381 GVPMICQPYLP--DQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVEAEGQEMRARIMHL 442 (470)
Q Consensus 381 GvP~v~~P~~~--DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l 442 (470)
|....++-.+. +..|.+.-+.+. - +.+...-|.++|.+.+.++-. +-|.+..+.+
T Consensus 135 G~~~tGvTvh~v~~~~D~G~Ii~Q~-~--v~I~~~dt~~~L~~r~~~~~~----~ll~~~l~~~ 191 (209)
T 4ds3_A 135 GMKLAGCTVHLVTEGMDEGPILAQA-A--VPVLDGDTAETLAARVLKAEH----RLYPLALQKF 191 (209)
T ss_dssp TCSEEEEEEEECCC--CCCCEEEEE-E--EECCTTCCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred CCCeEEEEEEEEcCCCCCCCeEEEE-E--EecCCCCCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 99988877653 444433333332 1 122224577888777755422 3455544444
No 231
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=24.55 E-value=4.2e+02 Score=24.65 Aligned_cols=37 Identities=5% Similarity=-0.113 Sum_probs=28.0
Q ss_pred EEEEEcCCCcc-ChHHHHHHHHHHHhCCCeEEEEeCCC
Q 012151 17 RVILFPLPFQG-HINPMLHLASILYSKGFSVTIIHTDF 53 (470)
Q Consensus 17 ~il~~~~~~~G-H~~p~l~La~~L~~rGh~V~~~~~~~ 53 (470)
.++++++++.+ .-..+..+.+.|.+.|.+|.+.+...
T Consensus 222 ~~Vlv~~Gs~~~~~~~~~~~~~al~~~~~~vv~~~g~~ 259 (404)
T 3h4t_A 222 PPVYVGFGSGPAPAEAARVAIEAVRAQGRRVVLSSGWA 259 (404)
T ss_dssp CCEEECCTTSCCCTTHHHHHHHHHHHTTCCEEEECTTT
T ss_pred CeEEEECCCCCCcHHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 56778888877 45557778888888899988877643
No 232
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=24.49 E-value=68 Score=32.30 Aligned_cols=39 Identities=5% Similarity=0.031 Sum_probs=35.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDF 53 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~ 53 (470)
+.+|++.+.++-.|-....-++..|..+|++|..+....
T Consensus 98 ~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~v 136 (579)
T 3bul_A 98 NGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMV 136 (579)
T ss_dssp SCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSB
T ss_pred CCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCC
Confidence 568999999999999999999999999999999987753
No 233
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=24.44 E-value=3.2e+02 Score=24.76 Aligned_cols=108 Identities=13% Similarity=0.133 Sum_probs=57.0
Q ss_pred eEEEEEcCcccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceee-eccChHhhhccCC
Q 012151 284 SVVYISFGSVIAINKDGFLEIAWGVANS-RMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIV-KWAPQQEVLAHPA 361 (470)
Q Consensus 284 ~~I~vs~Gs~~~~~~~~~~~i~~al~~~-~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~p~~~lL~~~~ 361 (470)
.+.+|..|.+.. .++.++... +..++.+...+.... +.+.+.+ -+. -+-...+++..++
T Consensus 7 rigiiG~G~ig~-------~~~~~l~~~~~~~~~av~d~~~~~~----~~~a~~~--------~~~~~~~~~~~ll~~~~ 67 (329)
T 3evn_A 7 RYGVVSTAKVAP-------RFIEGVRLAGNGEVVAVSSRTLESA----QAFANKY--------HLPKAYDKLEDMLADES 67 (329)
T ss_dssp EEEEEBCCTTHH-------HHHHHHHHHCSEEEEEEECSCSSTT----CC---CC--------CCSCEESCHHHHHTCTT
T ss_pred EEEEEechHHHH-------HHHHHHHhCCCcEEEEEEcCCHHHH----HHHHHHc--------CCCcccCCHHHHhcCCC
Confidence 477788887752 345555554 345555554432111 1111111 121 3557788998777
Q ss_pred cceeecccCch----hhHHhhhcCCceec-CCCcc--chhh-hHHHHHhhhheeEEcC
Q 012151 362 VGGFWTHSGWN----STLESMCEGVPMIC-QPYLP--DQMV-NARYVSHFWRVGLHSE 411 (470)
Q Consensus 362 ~~~~I~HGG~g----s~~eal~~GvP~v~-~P~~~--DQ~~-na~rv~~~~G~G~~l~ 411 (470)
+++++----.. .+.+|+.+|+++++ -|+.. ++-. -....+++ |+-+...
T Consensus 68 ~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~-~~~~~v~ 124 (329)
T 3evn_A 68 IDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESC-NLFLMEA 124 (329)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHT-TCCEEEE
T ss_pred CCEEEECCCcHHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHc-CCEEEEE
Confidence 77677544433 46778999999886 35543 3322 23344453 6655443
No 234
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=24.41 E-value=2.7e+02 Score=25.35 Aligned_cols=107 Identities=9% Similarity=-0.003 Sum_probs=58.8
Q ss_pred EEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCce-eeeccChHhhhccCCcc
Q 012151 285 VVYISFGSVIAINKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGC-IVKWAPQQEVLAHPAVG 363 (470)
Q Consensus 285 ~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~p~~~lL~~~~~~ 363 (470)
+..|..|.... ..+.++ ..+..++.++..+. +...+.+.+....... ..-|-+..++|..++++
T Consensus 5 vgiiG~G~~~~-------~~~~~l-~~~~~lvav~d~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD 69 (337)
T 3ip3_A 5 ICVIGSSGHFR-------YALEGL-DEECSITGIAPGVP-------EEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPD 69 (337)
T ss_dssp EEEECSSSCHH-------HHHTTC-CTTEEEEEEECSST-------TCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCS
T ss_pred EEEEccchhHH-------HHHHhc-CCCcEEEEEecCCc-------hhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCC
Confidence 55666666542 344445 44556666664331 0112233322222111 23567788999887777
Q ss_pred eeecccCchh----hHHhhhcCCceec-CCCccc---hhhhHHHHHhhhhee
Q 012151 364 GFWTHSGWNS----TLESMCEGVPMIC-QPYLPD---QMVNARYVSHFWRVG 407 (470)
Q Consensus 364 ~~I~HGG~gs----~~eal~~GvP~v~-~P~~~D---Q~~na~rv~~~~G~G 407 (470)
+++-..-..+ +.+||.+|+++++ -|+..+ -..-.+..+++ |+-
T Consensus 70 ~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~-g~~ 120 (337)
T 3ip3_A 70 ILVINTVFSLNGKILLEALERKIHAFVEKPIATTFEDLEKIRSVYQKV-RNE 120 (337)
T ss_dssp EEEECSSHHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHH-TTT
T ss_pred EEEEeCCcchHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHh-CCc
Confidence 7876655444 7788999999776 376553 22233444553 654
No 235
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=24.35 E-value=90 Score=26.31 Aligned_cols=33 Identities=9% Similarity=0.148 Sum_probs=23.4
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTD 52 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 52 (470)
|+|++.-.. |-+ -..|+++|.++||+|+.+.-.
T Consensus 1 M~ilItGat--G~i--G~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 1 MKIFIVGST--GRV--GKSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp CEEEEESTT--SHH--HHHHHHHHTTSSCEEEEEESS
T ss_pred CeEEEECCC--CHH--HHHHHHHHHHCCCEEEEEECC
Confidence 456665433 333 368899999999999998763
No 236
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=24.26 E-value=91 Score=26.18 Aligned_cols=36 Identities=11% Similarity=0.125 Sum_probs=29.0
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
.-++++..+..|+-.-...+++.|.++|+.|..+-.
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 346666777778888899999999999998877654
No 237
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=23.94 E-value=56 Score=29.14 Aligned_cols=31 Identities=13% Similarity=0.082 Sum_probs=23.9
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
|+|+|+-.+..| ..+|..|.++||+|+++..
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r 31 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLR 31 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEc
Confidence 468888665544 4788999999999999865
No 238
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=23.62 E-value=1.7e+02 Score=23.42 Aligned_cols=38 Identities=8% Similarity=0.008 Sum_probs=29.6
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDF 53 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~ 53 (470)
+++|+|+.+++. ...-+....+.|.+.|++|.++++..
T Consensus 2 ~~ki~il~~~g~-~~~e~~~~~~~l~~ag~~v~~vs~~~ 39 (168)
T 3l18_A 2 SMKVLFLSADGF-EDLELIYPLHRIKEEGHEVYVASFQR 39 (168)
T ss_dssp CCEEEEECCTTB-CHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CcEEEEEeCCCc-cHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 578999998874 44445667788888999999999853
No 239
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=23.53 E-value=2.1e+02 Score=26.54 Aligned_cols=112 Identities=10% Similarity=0.050 Sum_probs=63.2
Q ss_pred CeEEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCc
Q 012151 283 KSVVYISFGSVIAINKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAV 362 (470)
Q Consensus 283 ~~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~ 362 (470)
-.+..|..|.+. ...++.++...+..++.++..+. + .-+.+.++.+ ...-+-+..++|..+++
T Consensus 27 irvgiiG~G~~~------~~~~~~~~~~~~~~lvav~d~~~-------~-~a~~~a~~~~---~~~~~~~~~~ll~~~~v 89 (361)
T 3u3x_A 27 LRFAAVGLNHNH------IYGQVNCLLRAGARLAGFHEKDD-------A-LAAEFSAVYA---DARRIATAEEILEDENI 89 (361)
T ss_dssp CEEEEECCCSTT------HHHHHHHHHHTTCEEEEEECSCH-------H-HHHHHHHHSS---SCCEESCHHHHHTCTTC
T ss_pred cEEEEECcCHHH------HHHHHHHhhcCCcEEEEEEcCCH-------H-HHHHHHHHcC---CCcccCCHHHHhcCCCC
Confidence 357888888653 22345555556777776664321 0 1122222221 12245678899998888
Q ss_pred ceeecccCch----hhHHhhhcCCceec-CCCccc--hh-hhHHHHHhhhheeEEcCC
Q 012151 363 GGFWTHSGWN----STLESMCEGVPMIC-QPYLPD--QM-VNARYVSHFWRVGLHSEW 412 (470)
Q Consensus 363 ~~~I~HGG~g----s~~eal~~GvP~v~-~P~~~D--Q~-~na~rv~~~~G~G~~l~~ 412 (470)
++++--.-.. .+.+||.+|+++++ -|+..+ +- .-.+..+++ |+-+.+..
T Consensus 90 D~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~-g~~l~v~~ 146 (361)
T 3u3x_A 90 GLIVSAAVSSERAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQAET-GRIFSILY 146 (361)
T ss_dssp CEEEECCCHHHHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHTT-CCCEEEEC
T ss_pred CEEEEeCChHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHc-CCEEEEec
Confidence 8888655533 46788999999888 565542 22 222344443 65555544
No 240
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=23.46 E-value=92 Score=28.75 Aligned_cols=28 Identities=14% Similarity=0.138 Sum_probs=22.0
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEEcCCC
Q 012151 296 INKDGFLEIAWGVANSRMPFLWVVRPGL 323 (470)
Q Consensus 296 ~~~~~~~~i~~al~~~~~~~i~~~~~~~ 323 (470)
.+.+....+.+|++....+.||.+.++.
T Consensus 62 td~~Ra~dL~~a~~Dp~i~aI~~~rGG~ 89 (327)
T 4h1h_A 62 SIRSRVADIHEAFNDSSVKAILTVIGGF 89 (327)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCS
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCCch
Confidence 3455677799999999999999986653
No 241
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=23.46 E-value=87 Score=26.81 Aligned_cols=33 Identities=15% Similarity=0.172 Sum_probs=24.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
++.++++.++.| --.++|+.|.++|++|.+..-
T Consensus 2 ~k~vlITGas~g---IG~~ia~~l~~~G~~V~~~~r 34 (235)
T 3l77_A 2 MKVAVITGASRG---IGEAIARALARDGYALALGAR 34 (235)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 346666666532 346899999999999988765
No 242
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=23.30 E-value=79 Score=23.29 Aligned_cols=47 Identities=4% Similarity=-0.090 Sum_probs=33.5
Q ss_pred cCCceecCCCccchhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhcc
Q 012151 380 EGVPMICQPYLPDQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVE 429 (470)
Q Consensus 380 ~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~ 429 (470)
..+|+|++ ..+......+..+ .|+--.+.+.++.++|.++|++++..
T Consensus 79 ~~~~ii~~--~~~~~~~~~~~~~-~g~~~~l~kp~~~~~l~~~i~~~~~~ 125 (127)
T 2gkg_A 79 KNVPIVII--GNPDGFAQHRKLK-AHADEYVAKPVDADQLVERAGALIGF 125 (127)
T ss_dssp TTSCEEEE--ECGGGHHHHHHST-TCCSEEEESSCCHHHHHHHHHHHHCC
T ss_pred cCCCEEEE--ecCCchhHHHHHH-hCcchheeCCCCHHHHHHHHHHHHcC
Confidence 57899998 4444455555666 37755565568999999999998763
No 243
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=23.30 E-value=32 Score=31.37 Aligned_cols=33 Identities=21% Similarity=0.264 Sum_probs=25.4
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhC-----C-CeEEEEeC
Q 012151 14 NGRRVILFPLPFQGHINPMLHLASILYSK-----G-FSVTIIHT 51 (470)
Q Consensus 14 ~~~~il~~~~~~~GH~~p~l~La~~L~~r-----G-h~V~~~~~ 51 (470)
.+|+|+|+-.+..| ..+|..|.++ | |+|+++..
T Consensus 7 ~~m~I~iiG~G~mG-----~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 7 QPIKIAVFGLGGVG-----GYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CCEEEEEECCSHHH-----HHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHhCccccCCCCCEEEEEc
Confidence 45789999766655 3568888888 9 99999864
No 244
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=23.29 E-value=81 Score=28.74 Aligned_cols=33 Identities=24% Similarity=0.295 Sum_probs=22.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
+++|++.-.. |-+ -.+|++.|.++||+|+++.-
T Consensus 5 ~~~vlVTGat--G~i--G~~l~~~L~~~G~~V~~~~r 37 (341)
T 3enk_A 5 KGTILVTGGA--GYI--GSHTAVELLAHGYDVVIADN 37 (341)
T ss_dssp SCEEEEETTT--SHH--HHHHHHHHHHTTCEEEEECC
T ss_pred CcEEEEecCC--cHH--HHHHHHHHHHCCCcEEEEec
Confidence 4566655433 333 25789999999999998764
No 245
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=23.28 E-value=4.4e+02 Score=24.21 Aligned_cols=107 Identities=9% Similarity=0.107 Sum_probs=59.2
Q ss_pred eEEEEEcCcccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCc
Q 012151 284 SVVYISFGSVIAINKDGFLEIAWGVANS-RMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAV 362 (470)
Q Consensus 284 ~~I~vs~Gs~~~~~~~~~~~i~~al~~~-~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~ 362 (470)
.+.+|.+|.+.. ..+.++.+. +..++.++..+ ++.......-+ +.-+-+..++|..+++
T Consensus 7 ~vgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~-----------~~~~~~a~~~g--~~~~~~~~~ll~~~~~ 66 (359)
T 3e18_A 7 QLVIVGYGGMGS-------YHVTLASAADNLEVHGVFDIL-----------AEKREAAAQKG--LKIYESYEAVLADEKV 66 (359)
T ss_dssp EEEEECCSHHHH-------HHHHHHHTSTTEEEEEEECSS-----------HHHHHHHHTTT--CCBCSCHHHHHHCTTC
T ss_pred cEEEECcCHHHH-------HHHHHHHhCCCcEEEEEEcCC-----------HHHHHHHHhcC--CceeCCHHHHhcCCCC
Confidence 477888887752 344566665 44555555322 22221111112 2345677889987777
Q ss_pred ceeecccCch----hhHHhhhcCCceec-CCCcc--chhh-hHHHHHhhhheeEEcC
Q 012151 363 GGFWTHSGWN----STLESMCEGVPMIC-QPYLP--DQMV-NARYVSHFWRVGLHSE 411 (470)
Q Consensus 363 ~~~I~HGG~g----s~~eal~~GvP~v~-~P~~~--DQ~~-na~rv~~~~G~G~~l~ 411 (470)
++++--.-.. .+.+|+.+|+++++ -|+.. ++-. -....+++ |+-+.+.
T Consensus 67 D~V~i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~-g~~~~v~ 122 (359)
T 3e18_A 67 DAVLIATPNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRV-NKHFMVH 122 (359)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHH-TCCEEEE
T ss_pred CEEEEcCCcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHh-CCeEEEE
Confidence 7787655544 36778899999887 35443 2322 22344453 6655543
No 246
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=23.26 E-value=1.5e+02 Score=22.48 Aligned_cols=38 Identities=8% Similarity=-0.021 Sum_probs=27.7
Q ss_pred EEEEEcCCCccCh--HHHHHHHHHHHhCCCeEEEEeCCCC
Q 012151 17 RVILFPLPFQGHI--NPMLHLASILYSKGFSVTIIHTDFN 54 (470)
Q Consensus 17 ~il~~~~~~~GH~--~p~l~La~~L~~rGh~V~~~~~~~~ 54 (470)
-+.++..+-+|+. .-.+.+|..+.+.||+|.++-...-
T Consensus 4 ~~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~DG 43 (119)
T 2d1p_B 4 IAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADG 43 (119)
T ss_dssp EEEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGGG
T ss_pred EEEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEehHH
Confidence 3445555556765 6678899999999999999877533
No 247
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=23.18 E-value=1.4e+02 Score=27.43 Aligned_cols=68 Identities=10% Similarity=-0.128 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHHhh
Q 012151 299 DGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESM 378 (470)
Q Consensus 299 ~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal 378 (470)
+.+..+...|++.+..+.+..... +....+ . -...+....++ +|.-||=||+.|++
T Consensus 44 ~~~~~i~~~l~~~g~~~~~~~t~~-----------~~~~~~----------~-~~~~~~~~~d~--vvv~GGDGTl~~v~ 99 (332)
T 2bon_A 44 LPLREAIMLLREEGMTIHVRVTWE-----------KGDAAR----------Y-VEEARKFGVAT--VIAGGGDGTINEVS 99 (332)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECCS-----------TTHHHH----------H-HHHHHHHTCSE--EEEEESHHHHHHHH
T ss_pred chHHHHHHHHHHcCCcEEEEEecC-----------cchHHH----------H-HHHHHhcCCCE--EEEEccchHHHHHH
Confidence 456778888888887775554211 111100 0 01112223445 99999999999985
Q ss_pred --------hcCCceecCCCc
Q 012151 379 --------CEGVPMICQPYL 390 (470)
Q Consensus 379 --------~~GvP~v~~P~~ 390 (470)
..++|+.++|..
T Consensus 100 ~~l~~~~~~~~~plgiiP~G 119 (332)
T 2bon_A 100 TALIQCEGDDIPALGILPLG 119 (332)
T ss_dssp HHHHHCCSSCCCEEEEEECS
T ss_pred HHHhhcccCCCCeEEEecCc
Confidence 367899999974
No 248
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=23.07 E-value=71 Score=28.54 Aligned_cols=34 Identities=26% Similarity=0.181 Sum_probs=27.9
Q ss_pred CEEEEEcCCCc--cChHHHHHHHHHHHhCCCeEEEEeCC
Q 012151 16 RRVILFPLPFQ--GHINPMLHLASILYSKGFSVTIIHTD 52 (470)
Q Consensus 16 ~~il~~~~~~~--GH~~p~l~La~~L~~rGh~V~~~~~~ 52 (470)
.+|++++.++- |+ -+.+|+.|..+|++|+++...
T Consensus 80 ~~VlVlcG~GNNGGD---Glv~AR~L~~~G~~V~V~~~~ 115 (265)
T 2o8n_A 80 PTVLVICGPGNNGGD---GLVCARHLKLFGYQPTIYYPK 115 (265)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCS
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCcEEEEEeC
Confidence 38999999875 44 378999999999999998653
No 249
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=22.99 E-value=2.6e+02 Score=22.92 Aligned_cols=36 Identities=17% Similarity=0.169 Sum_probs=27.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 012151 17 RVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDF 53 (470)
Q Consensus 17 ~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~ 53 (470)
+|+++-.++. ...-+....+.|.+.|++|+++++..
T Consensus 7 kv~ill~~g~-~~~e~~~~~~~l~~ag~~v~~~s~~~ 42 (190)
T 4e08_A 7 SALVILAPGA-EEMEFIIAADVLRRAGIKVTVAGLNG 42 (190)
T ss_dssp EEEEEECTTC-CHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEEEECCCc-hHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 7888887765 44445666788889999999999865
No 250
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=22.83 E-value=1.3e+02 Score=27.65 Aligned_cols=82 Identities=6% Similarity=-0.155 Sum_probs=46.7
Q ss_pred EEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcce
Q 012151 285 VVYISFGSVIAINKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGG 364 (470)
Q Consensus 285 ~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~ 364 (470)
.|+++-.+......+.+..+...|++.+..+.+.... -+....+ + -........+ +
T Consensus 28 ~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~-----------~~~~a~~-------~----~~~~~~~~~d--~ 83 (337)
T 2qv7_A 28 RIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATE-----------KIGDATL-------E----AERAMHENYD--V 83 (337)
T ss_dssp EEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECC-----------STTHHHH-------H----HHHHTTTTCS--E
T ss_pred EEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEec-----------CcchHHH-------H----HHHHhhcCCC--E
Confidence 4555544433223355677888888877665444311 1111100 0 0111112234 4
Q ss_pred eecccCchhhHHhhh------cCCceecCCCc
Q 012151 365 FWTHSGWNSTLESMC------EGVPMICQPYL 390 (470)
Q Consensus 365 ~I~HGG~gs~~eal~------~GvP~v~~P~~ 390 (470)
+|.-||=||+.|++. .++|+.++|..
T Consensus 84 vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~G 115 (337)
T 2qv7_A 84 LIAAGGDGTLNEVVNGIAEKPNRPKLGVIPMG 115 (337)
T ss_dssp EEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred EEEEcCchHHHHHHHHHHhCCCCCcEEEecCC
Confidence 999999999999853 57899999974
No 251
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=22.82 E-value=94 Score=26.14 Aligned_cols=36 Identities=6% Similarity=0.069 Sum_probs=26.8
Q ss_pred CCCEEEEEcCCCccC----hHHHHHHHHHHHhCCCeEEEEe
Q 012151 14 NGRRVILFPLPFQGH----INPMLHLASILYSKGFSVTIIH 50 (470)
Q Consensus 14 ~~~~il~~~~~~~GH----~~p~l~La~~L~~rGh~V~~~~ 50 (470)
..++|.+++... +. ..-...|++.|+++|+.|.+-.
T Consensus 12 ~~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GG 51 (189)
T 3sbx_A 12 GRWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGG 51 (189)
T ss_dssp -CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECC
Confidence 457899998766 43 4557888899999999877754
No 252
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=22.77 E-value=89 Score=28.04 Aligned_cols=32 Identities=19% Similarity=0.218 Sum_probs=24.3
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
+++|+|+-.+..|. .+|+.|.+.||+|+++..
T Consensus 4 ~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 4 SIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 57899997666553 468888899999987643
No 253
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=22.75 E-value=99 Score=26.98 Aligned_cols=31 Identities=3% Similarity=-0.044 Sum_probs=21.0
Q ss_pred CCcEEEeCCCc-cchHHHHhhcCCCeEEEecc
Q 012151 122 SPCCLITDAFW-FFTHTVAADFKLPTIVLQTC 152 (470)
Q Consensus 122 ~pDlvi~D~~~-~~~~~vA~~~giP~v~~~~~ 152 (470)
+||+||..... ......-++.|||++.+...
T Consensus 60 ~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~~ 91 (260)
T 2q8p_A 60 KPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFD 91 (260)
T ss_dssp CCSEEEEEGGGHHHHHHHHHHHTSCCEEECCS
T ss_pred CCCEEEecCccCHHHHHHHHHcCCcEEEecCC
Confidence 89999986432 12234456789999987653
No 254
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=22.71 E-value=73 Score=27.90 Aligned_cols=38 Identities=24% Similarity=0.236 Sum_probs=29.3
Q ss_pred EEEEE-cCCCccChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012151 17 RVILF-PLPFQGHINPMLHLASILYSKGFSVTIIHTDFN 54 (470)
Q Consensus 17 ~il~~-~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~ 54 (470)
.|+|. +-++-|-..-...||..|+++|++|.++=.+..
T Consensus 8 vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 46 (257)
T 1wcv_1 8 RIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDPQ 46 (257)
T ss_dssp EEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred EEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 34444 234558899999999999999999999876543
No 255
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=22.65 E-value=1.3e+02 Score=21.87 Aligned_cols=33 Identities=6% Similarity=-0.041 Sum_probs=24.6
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
...|+++|..+ ......+..|.+.|++|.++..
T Consensus 56 ~~~iv~yC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (103)
T 3eme_A 56 NEIYYIVCAGG----VRSAKVVEYLEANGIDAVNVEG 88 (103)
T ss_dssp TSEEEEECSSS----SHHHHHHHHHHTTTCEEEEETT
T ss_pred CCeEEEECCCC----hHHHHHHHHHHHCCCCeEEeCC
Confidence 35788998654 2466788999999998877654
No 256
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=22.57 E-value=61 Score=29.28 Aligned_cols=31 Identities=23% Similarity=0.264 Sum_probs=24.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
|+|+|+-.+..| ..+|..|.++||+|+++..
T Consensus 4 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 4 MKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCcEEEEEC
Confidence 479998765544 4678999999999999865
No 257
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=22.54 E-value=2.3e+02 Score=25.98 Aligned_cols=104 Identities=5% Similarity=0.035 Sum_probs=53.2
Q ss_pred CCCeEEEEEcCcccc-cCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCc----hhHHHHhc-CC----------
Q 012151 281 TPKSVVYISFGSVIA-INKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLP----KGFLEMLD-GR---------- 344 (470)
Q Consensus 281 ~~~~~I~vs~Gs~~~-~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p----~~~~~~~~-~~---------- 344 (470)
+.+.+-.||..|... ..++.++..++-|++.|.+++. +............-+ +.+.+... ++
T Consensus 11 ~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~--~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGG 88 (327)
T 4h1h_A 11 QGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTF--GEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGG 88 (327)
T ss_dssp TTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEE--CTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred CCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEE--CcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCCc
Confidence 344577777655433 4566777788888888888743 333322211111111 11111111 11
Q ss_pred ---ceeeeccChHhhhccCCcceeecccCchhhHHhhh--cCCceecCC
Q 012151 345 ---GCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLESMC--EGVPMICQP 388 (470)
Q Consensus 345 ---~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~--~GvP~v~~P 388 (470)
.++.++++...+-.+|.. ||=.+-..+++-+++ .|+..+.=|
T Consensus 89 ~g~~rlL~~LD~~~i~~~PK~--~~GySDiT~L~~al~~~~g~~t~hGp 135 (327)
T 4h1h_A 89 FNSNQLLPYLDYDLISENPKI--LCGFSDITALATAIYTQTELITYSGA 135 (327)
T ss_dssp SCGGGGGGGCCHHHHHHSCCE--EEECTTHHHHHHHHHHHHCBCEEECC
T ss_pred hhHHHHhhhcchhhhccCCeE--EEecccccHHHHHHHHhcCeEEEeCc
Confidence 233455555666666666 666666666666664 354444444
No 258
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=22.52 E-value=48 Score=30.33 Aligned_cols=37 Identities=14% Similarity=0.081 Sum_probs=24.9
Q ss_pred CCCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCC-eEEEEeC
Q 012151 10 MVPRNGRRVILFPLPFQGHINPMLHLASILYSKGF-SVTIIHT 51 (470)
Q Consensus 10 m~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh-~V~~~~~ 51 (470)
|++.+.++|.|+-.+..| ..+|+.|+++|| +|+++-.
T Consensus 19 ~~~~~~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr 56 (312)
T 3qsg_A 19 YFQSNAMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDA 56 (312)
T ss_dssp ------CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECS
T ss_pred cccCCCCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcC
Confidence 333345789999765544 578999999999 9988755
No 259
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=22.47 E-value=2.3e+02 Score=23.78 Aligned_cols=37 Identities=16% Similarity=0.160 Sum_probs=29.0
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDF 53 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~ 53 (470)
.+|+|+.+++. ...-+....+.|.+.|++|+++++..
T Consensus 10 ~~v~ill~~g~-~~~e~~~~~~~l~~ag~~v~~vs~~g 46 (208)
T 3ot1_A 10 KRILVPVAHGS-EEMETVIIVDTLVRAGFQVTMAAVGD 46 (208)
T ss_dssp CEEEEEECTTC-CHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEEECCCC-cHHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 38999988875 35556667788888999999999853
No 260
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=22.45 E-value=87 Score=26.76 Aligned_cols=37 Identities=16% Similarity=0.147 Sum_probs=29.2
Q ss_pred EEEEEcC-CCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 012151 17 RVILFPL-PFQGHINPMLHLASILYSKGFSVTIIHTDF 53 (470)
Q Consensus 17 ~il~~~~-~~~GH~~p~l~La~~L~~rGh~V~~~~~~~ 53 (470)
.|.+... ++-|-..-...||..|+++|++|.++=.+.
T Consensus 4 ~i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (237)
T 1g3q_A 4 IISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp EEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred EEEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 3444443 455899999999999999999999987754
No 261
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=22.40 E-value=3.5e+02 Score=22.77 Aligned_cols=143 Identities=10% Similarity=-0.058 Sum_probs=76.1
Q ss_pred CCeEEEEEcCcccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchh---HHHHhcCCceeeecc--ChHhh
Q 012151 282 PKSVVYISFGSVIAINKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKG---FLEMLDGRGCIVKWA--PQQEV 356 (470)
Q Consensus 282 ~~~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~---~~~~~~~~~~~~~~~--p~~~l 356 (470)
++.+++.-.|+.... +....+++.|.+.+..+-+++......-..-.. ..+. ..+...++-...++. ++-..
T Consensus 7 ~k~I~lgiTGs~aa~--~k~~~ll~~L~~~g~eV~vv~T~~A~~~i~~~~-~~~~~~~~l~~l~g~~v~~~~~~~~hi~~ 83 (201)
T 3lqk_A 7 GKHVGFGLTGSHCTY--HEVLPQMERLVELGAKVTPFVTHTVQTTDTKFG-ESSEWINKIKQITEEPIVDSMVKAEPFGP 83 (201)
T ss_dssp TCEEEEECCSCGGGG--GGTHHHHHHHHHTTCEEEEECSSCSCCTTCCTT-CSCHHHHHHHHHCCSCCBCSHHHHGGGTT
T ss_pred CCEEEEEEEChHHHH--HHHHHHHHHHhhCCCEEEEEEChhHHHHHHHhh-chhHHHHHHHHHhCCCeEeecCccccccc
Confidence 355666667776532 124456677777787776666554322110000 0111 122233332222111 22222
Q ss_pred hccCCcceeecccCchhhH----------------HhhhcCCceecCCC----ccchhhhHHHHHhhhheeEEcCC----
Q 012151 357 LAHPAVGGFWTHSGWNSTL----------------ESMCEGVPMICQPY----LPDQMVNARYVSHFWRVGLHSEW---- 412 (470)
Q Consensus 357 L~~~~~~~~I~HGG~gs~~----------------eal~~GvP~v~~P~----~~DQ~~na~rv~~~~G~G~~l~~---- 412 (470)
-..+++ .+|.-+-.||+. .++..+.|+|++|- ....+.|..++.+ +|+=+....
T Consensus 84 s~~aD~-mvIaP~TanTlAkiA~GiaDnLlt~aa~~~Lk~~~plvl~Pamn~~m~~h~~Nm~~L~~-~G~~i~~P~~~~~ 161 (201)
T 3lqk_A 84 KTPLDC-MVIAPMTGNSTSKFANAMTDSPVLMGAKATLRNGKPVVVGISTNDALGLNGINIMRLMA-TKNIYFIPFGQDN 161 (201)
T ss_dssp TSCCSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHHHHHTTCCEEEEEEETTTTTTTHHHHHHHHT-STTEEECCEEESC
T ss_pred ccccCE-EEEccCCHHHHHHHHCcccCcHHHHHHHHHhhcCCCEEEEECCChhHHHhHHHHHHHHH-CCCEEECCCCccc
Confidence 222332 355555544332 23567999999994 4567779999999 697655321
Q ss_pred --------cccHHHHHHHHHHHhcc
Q 012151 413 --------KLERMEIERAIRRVMVE 429 (470)
Q Consensus 413 --------~~~~~~l~~ai~~vl~~ 429 (470)
..+.+.|.+.|.+.|++
T Consensus 162 ~~~~p~s~~a~~~~i~~tv~~al~~ 186 (201)
T 3lqk_A 162 PQVKPNSLVARMEALPETIEAALRG 186 (201)
T ss_dssp TTTCTTCEEECGGGHHHHHHHHHTT
T ss_pred cccCCCcccCCHHHHHHHHHHHHhc
Confidence 13457888889888875
No 262
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=22.39 E-value=85 Score=28.34 Aligned_cols=33 Identities=15% Similarity=0.191 Sum_probs=23.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 012151 17 RVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDF 53 (470)
Q Consensus 17 ~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~ 53 (470)
+|+++- +.|.+ -..|+++|.++||+|+.++-..
T Consensus 13 ~ilVtG--atG~i--G~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 13 KILIFG--GTGYI--GNHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CEEEET--TTSTT--HHHHHHHHHHTTCCEEEEECTT
T ss_pred eEEEEC--CCchH--HHHHHHHHHHCCCcEEEEECCC
Confidence 566653 33444 3578899999999999887643
No 263
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=22.31 E-value=62 Score=29.63 Aligned_cols=31 Identities=23% Similarity=0.334 Sum_probs=24.8
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEE
Q 012151 14 NGRRVILFPLPFQGHINPMLHLASILYSKGFSVTII 49 (470)
Q Consensus 14 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~ 49 (470)
..++|+++-.++.| ..+|..|++.||+|+++
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARAGHEVILI 48 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEE
Confidence 46799999777765 56788999999999998
No 264
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=22.21 E-value=97 Score=28.74 Aligned_cols=72 Identities=14% Similarity=0.211 Sum_probs=45.9
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCcceeecccCchhhHH
Q 012151 297 NKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAVGGFWTHSGWNSTLE 376 (470)
Q Consensus 297 ~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~~~~I~HGG~gs~~e 376 (470)
+.+....+.+|++....+.||.+.++.... ++.++++...+-.+|.. ||=.+-...++-
T Consensus 64 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~~-------------------rlL~~lD~~~i~~~PK~--~~GySDiTaL~~ 122 (336)
T 3sr3_A 64 IQERAKELNALIRNPNVSCIMSTIGGMNSN-------------------SLLPYIDYDAFQNNPKI--MIGYSDATALLL 122 (336)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSCGG-------------------GGGGGSCHHHHHHSCCE--EEECGGGHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccccHH-------------------HHhhhcChhHHhhCCeE--EEEechHHHHHH
Confidence 455677799999998899999987653111 44555555555555655 666666666666
Q ss_pred hhh--cCCceecCCC
Q 012151 377 SMC--EGVPMICQPY 389 (470)
Q Consensus 377 al~--~GvP~v~~P~ 389 (470)
+++ .|+..+-=|+
T Consensus 123 al~~~~G~~t~hGp~ 137 (336)
T 3sr3_A 123 GIYAKTGIPTFYGPA 137 (336)
T ss_dssp HHHHHHCCCEEECCC
T ss_pred HHHHhcCceEEECCh
Confidence 665 3665555554
No 265
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=22.14 E-value=1e+02 Score=29.16 Aligned_cols=43 Identities=12% Similarity=-0.062 Sum_probs=24.9
Q ss_pred hhhhcCCCCCCeEEEEEcCcccccCHHHHHHHHHHHHhCCCCEEE
Q 012151 273 SISWLDKQTPKSVVYISFGSVIAINKDGFLEIAWGVANSRMPFLW 317 (470)
Q Consensus 273 l~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~ 317 (470)
+.+++.....++++.|+-++.. .....+.+.+.|++.+..+.+
T Consensus 22 l~~~~~~~g~~~~liVtd~~~~--~~g~~~~v~~~L~~~gi~~~~ 64 (383)
T 3ox4_A 22 AIKDLNGSGFKNALIVSDAFMN--KSGVVKQVADLLKAQGINSAV 64 (383)
T ss_dssp HHHTTTTSCCCEEEEEEEHHHH--HTTHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHcCCCEEEEEECCchh--hCchHHHHHHHHHHcCCeEEE
Confidence 4455554443556666644332 122567788889888776644
No 266
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=22.06 E-value=33 Score=27.03 Aligned_cols=58 Identities=7% Similarity=0.014 Sum_probs=35.9
Q ss_pred cCCceecCCCccchhhhHHHHHhhhh-eeEEcCCcccHHHHHHHHHHHhccchhHHHHHHHHHH
Q 012151 380 EGVPMICQPYLPDQMVNARYVSHFWR-VGLHSEWKLERMEIERAIRRVMVEAEGQEMRARIMHL 442 (470)
Q Consensus 380 ~GvP~v~~P~~~DQ~~na~rv~~~~G-~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l 442 (470)
..+|+|++--..+.. ......+ .| +--.+.+.++.++|.++|++++.. ..+++..+++
T Consensus 78 ~~~~ii~ls~~~~~~-~~~~~~~-~g~~~~~l~kP~~~~~L~~~i~~~~~~---~~~~~~~~~~ 136 (154)
T 2rjn_A 78 PDIERVVISGYADAQ-ATIDAVN-RGKISRFLLKPWEDEDVFKVVEKGLQL---AFLREENLRL 136 (154)
T ss_dssp TTSEEEEEECGGGHH-HHHHHHH-TTCCSEEEESSCCHHHHHHHHHHHHHH---HHHHHHTTSC
T ss_pred CCCcEEEEecCCCHH-HHHHHHh-ccchheeeeCCCCHHHHHHHHHHHHHH---HHHHHHHHHH
Confidence 478888876555433 3333444 25 544454458999999999999886 4544443333
No 267
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=21.89 E-value=1e+02 Score=27.72 Aligned_cols=38 Identities=21% Similarity=0.275 Sum_probs=29.1
Q ss_pred CCCEEEEEcCCCccChHHH--HHHHHHHHhCC-CeEEEEeCC
Q 012151 14 NGRRVILFPLPFQGHINPM--LHLASILYSKG-FSVTIIHTD 52 (470)
Q Consensus 14 ~~~~il~~~~~~~GH~~p~--l~La~~L~~rG-h~V~~~~~~ 52 (470)
++.+||++.... +|-.+. -.|++.|.+.| ++|++...+
T Consensus 3 ~~~kvLiv~G~~-~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 3 KPIKTLLITGQN-NHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCEEEEEEESCC-SSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CceEEEEEcCCC-CCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 578999995444 886553 57788888888 999999764
No 268
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=21.87 E-value=89 Score=28.02 Aligned_cols=33 Identities=18% Similarity=0.208 Sum_probs=23.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTD 52 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 52 (470)
++|++.- +.|.+ -..|++.|.++||+|+.++-.
T Consensus 5 ~~ilVtG--atG~i--G~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 5 SRVLIVG--GTGYI--GKRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp CCEEEES--TTSTT--HHHHHHHHHHTTCCEEEECCS
T ss_pred CEEEEEc--CCcHH--HHHHHHHHHhCCCcEEEEECC
Confidence 4566664 33444 256789999999999987754
No 269
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=21.76 E-value=1.8e+02 Score=25.43 Aligned_cols=38 Identities=24% Similarity=0.308 Sum_probs=28.0
Q ss_pred CEEEEEcCCCc----------c-ChHHHHHHHHHHHhCCCeEEEEeCCC
Q 012151 16 RRVILFPLPFQ----------G-HINPMLHLASILYSKGFSVTIIHTDF 53 (470)
Q Consensus 16 ~~il~~~~~~~----------G-H~~p~l~La~~L~~rGh~V~~~~~~~ 53 (470)
.||+++..... | ...=++.--..|.+.|++|+++++..
T Consensus 10 kkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~g 58 (247)
T 3n7t_A 10 RKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASETG 58 (247)
T ss_dssp SEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 47888776632 3 24447777789999999999999843
No 270
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=21.75 E-value=1.4e+02 Score=26.06 Aligned_cols=30 Identities=20% Similarity=0.287 Sum_probs=22.4
Q ss_pred CCCcEEEeCCCccc-------hHHHHhhcCCCeEEEe
Q 012151 121 SSPCCLITDAFWFF-------THTVAADFKLPTIVLQ 150 (470)
Q Consensus 121 ~~pDlvi~D~~~~~-------~~~vA~~~giP~v~~~ 150 (470)
.+||+|++|..... |..+...+++|+|.+.
T Consensus 106 ~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 142 (237)
T 3goc_A 106 CPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVA 142 (237)
T ss_dssp SCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEE
T ss_pred CCCCEEEEeCceeecCCCcchhheeeeecCCCEEeee
Confidence 38999999965522 4466678899999864
No 271
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=21.29 E-value=2e+02 Score=24.66 Aligned_cols=91 Identities=12% Similarity=0.050 Sum_probs=0.0
Q ss_pred CeEEEEEcCcc-cccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHh-hhccC
Q 012151 283 KSVVYISFGSV-IAINKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQE-VLAHP 360 (470)
Q Consensus 283 ~~~I~vs~Gs~-~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~-lL~~~ 360 (470)
++...||-|.. . ......++..+.+-++|-++.... .+..+....-....+....+... ++..-
T Consensus 44 ~G~~vVsGGg~~G-----iM~aa~~gAl~~GG~tiGVlP~~~---------~~~e~~~~~~~~~~~~~~f~~Rk~~~~~~ 109 (215)
T 2a33_A 44 RNIDLVYGGGSIG-----LMGLVSQAVHDGGRHVIGIIPKTL---------MPRELTGETVGEVRAVADMHQRKAEMAKH 109 (215)
T ss_dssp TTCEEEECCCSSH-----HHHHHHHHHHHTTCCEEEEEESSC---------C--------CCEEEEESSHHHHHHHHHHT
T ss_pred CCCEEEECCChhh-----HhHHHHHHHHHcCCcEEEEcchHh---------cchhhccCCCCceeecCCHHHHHHHHHHh
Q ss_pred CcceeecccCchhhHHhh---------hcCCceecC
Q 012151 361 AVGGFWTHSGWNSTLESM---------CEGVPMICQ 387 (470)
Q Consensus 361 ~~~~~I~HGG~gs~~eal---------~~GvP~v~~ 387 (470)
+-..++--||.||+-|.. .+++|++++
T Consensus 110 sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll 145 (215)
T 2a33_A 110 SDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLL 145 (215)
T ss_dssp CSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEE
T ss_pred CCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEe
No 272
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=21.28 E-value=4.3e+02 Score=24.26 Aligned_cols=108 Identities=10% Similarity=0.011 Sum_probs=60.6
Q ss_pred eEEEEEcCcccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCc
Q 012151 284 SVVYISFGSVIAINKDGFLEIAWGVANS-RMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAV 362 (470)
Q Consensus 284 ~~I~vs~Gs~~~~~~~~~~~i~~al~~~-~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~ 362 (470)
.+.+|.+|.+.. ...+.++... +..++.+... -++.+.++.+ . ..-+-+..++|..+++
T Consensus 7 rvgiiG~G~~g~------~~~~~~l~~~~~~~l~av~d~-----------~~~~~~~~~~-~--~~~~~~~~~ll~~~~v 66 (358)
T 3gdo_A 7 KVGILGYGLSGS------VFHGPLLDVLDEYQISKIMTS-----------RTEEVKRDFP-D--AEVVHELEEITNDPAI 66 (358)
T ss_dssp EEEEECCSHHHH------HTTHHHHTTCTTEEEEEEECS-----------CHHHHHHHCT-T--SEEESSTHHHHTCTTC
T ss_pred eEEEEccCHHHH------HHHHHHHhhCCCeEEEEEEcC-----------CHHHHHhhCC-C--CceECCHHHHhcCCCC
Confidence 467788887752 1134455555 4455555532 2233333322 1 2245678889987777
Q ss_pred ceeecccCch----hhHHhhhcCCceec-CCCcc--chh-hhHHHHHhhhheeEEcCC
Q 012151 363 GGFWTHSGWN----STLESMCEGVPMIC-QPYLP--DQM-VNARYVSHFWRVGLHSEW 412 (470)
Q Consensus 363 ~~~I~HGG~g----s~~eal~~GvP~v~-~P~~~--DQ~-~na~rv~~~~G~G~~l~~ 412 (470)
++++---... -+.+|+.+|+++++ -|+.. ++- .-....+++ |+-+.+..
T Consensus 67 D~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~-g~~~~v~~ 123 (358)
T 3gdo_A 67 ELVIVTTPSGLHYEHTMACIQAGKHVVMEKPMTATAEEGETLKRAADEK-GVLLSVYH 123 (358)
T ss_dssp CEEEECSCTTTHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHH-TCCEEEEC
T ss_pred CEEEEcCCcHHHHHHHHHHHHcCCeEEEecCCcCCHHHHHHHHHHHHHc-CCeEEEee
Confidence 7787655543 47788999999988 34433 332 233444553 66555543
No 273
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=21.28 E-value=89 Score=27.15 Aligned_cols=36 Identities=17% Similarity=0.135 Sum_probs=28.7
Q ss_pred EEEEcC-CCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 012151 18 VILFPL-PFQGHINPMLHLASILYSKGFSVTIIHTDF 53 (470)
Q Consensus 18 il~~~~-~~~GH~~p~l~La~~L~~rGh~V~~~~~~~ 53 (470)
|+|... ++-|-..-...||..|+++|++|.++=.+.
T Consensus 5 i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 5 IVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp EEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred EEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 444333 455899999999999999999999987764
No 274
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=21.23 E-value=1.2e+02 Score=27.05 Aligned_cols=37 Identities=5% Similarity=-0.049 Sum_probs=27.5
Q ss_pred CEEEEEcCCCc-cChH---HHHHHHHHHHhCCCeEEEEeCC
Q 012151 16 RRVILFPLPFQ-GHIN---PMLHLASILYSKGFSVTIIHTD 52 (470)
Q Consensus 16 ~~il~~~~~~~-GH~~---p~l~La~~L~~rGh~V~~~~~~ 52 (470)
++|+++..+.. -|-. ....++++|.++||+|.++...
T Consensus 3 ~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 3 DKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred cEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 57888876543 2322 4568999999999999998875
No 275
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=21.15 E-value=56 Score=29.56 Aligned_cols=32 Identities=16% Similarity=0.027 Sum_probs=25.6
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
+++|.|+-.+..| ..+|+.|+++||+|+++-.
T Consensus 15 ~~~I~vIG~G~mG-----~~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMG-----APMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTH-----HHHHHHHTTSTTCEEEECS
T ss_pred CCeEEEECcCHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 4689999776655 4689999999999998754
No 276
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=21.13 E-value=92 Score=29.38 Aligned_cols=36 Identities=14% Similarity=0.081 Sum_probs=27.1
Q ss_pred CCCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 012151 10 MVPRNGRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTD 52 (470)
Q Consensus 10 m~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 52 (470)
|++ .++|+++..+.. .+.+++++++.|++|.++..+
T Consensus 4 m~~--~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~ 39 (403)
T 4dim_A 4 MYD--NKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMP 39 (403)
T ss_dssp --C--CCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECS
T ss_pred ccC--CCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCC
Confidence 554 568999877754 366999999999999998653
No 277
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=21.05 E-value=61 Score=24.96 Aligned_cols=30 Identities=17% Similarity=0.239 Sum_probs=22.4
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 17 RVILFPLPFQGHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 17 ~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
+|+++-. |.+- ..+++.|.+.|++|+++..
T Consensus 8 ~v~I~G~---G~iG--~~~a~~l~~~g~~v~~~d~ 37 (144)
T 2hmt_A 8 QFAVIGL---GRFG--GSIVKELHRMGHEVLAVDI 37 (144)
T ss_dssp SEEEECC---SHHH--HHHHHHHHHTTCCCEEEES
T ss_pred cEEEECC---CHHH--HHHHHHHHHCCCEEEEEeC
Confidence 5887765 3332 5678999999999998765
No 278
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=20.93 E-value=1.4e+02 Score=25.85 Aligned_cols=42 Identities=19% Similarity=0.098 Sum_probs=29.6
Q ss_pred hhhhcCCCCCCeEEEEEcCcccccCHHHHHHHHHHHHhCCCCEE
Q 012151 273 SISWLDKQTPKSVVYISFGSVIAINKDGFLEIAWGVANSRMPFL 316 (470)
Q Consensus 273 l~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i 316 (470)
+.+|+. ..+.+++|..|+...........+.++|+.++..+.
T Consensus 24 l~~~~~--~~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~ 65 (229)
T 1fy2_A 24 IANQLN--GRRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVT 65 (229)
T ss_dssp HHHHHT--TCCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEE
T ss_pred HHHHhc--CCCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEE
Confidence 566665 345699998887543444567778999999987653
No 279
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=20.93 E-value=82 Score=29.16 Aligned_cols=30 Identities=13% Similarity=0.149 Sum_probs=20.6
Q ss_pred CCcEEEeCCCcc-chHHHHhhcCCCeEEEec
Q 012151 122 SPCCLITDAFWF-FTHTVAADFKLPTIVLQT 151 (470)
Q Consensus 122 ~pDlvi~D~~~~-~~~~vA~~~giP~v~~~~ 151 (470)
+||+||...... ......+.+|||++.+..
T Consensus 96 ~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~ 126 (346)
T 2etv_A 96 QPDVVFITYVDRXTAXDIQEXTGIPVVVLSY 126 (346)
T ss_dssp CCSEEEEESCCHHHHHHHHHHHTSCEEEECC
T ss_pred CCCEEEEeCCccchHHHHHHhcCCcEEEEec
Confidence 899999875321 123345678999999753
No 280
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=20.92 E-value=1.5e+02 Score=22.14 Aligned_cols=48 Identities=8% Similarity=-0.083 Sum_probs=34.7
Q ss_pred cCCceecCCCccchhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhcc
Q 012151 380 EGVPMICQPYLPDQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVE 429 (470)
Q Consensus 380 ~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~ 429 (470)
..+|+|++--..+... .....+ .|+--.+.+.++.++|.++|+++++.
T Consensus 78 ~~~~ii~~s~~~~~~~-~~~~~~-~g~~~~l~kP~~~~~l~~~i~~~~~~ 125 (137)
T 3hdg_A 78 AKPYVIVISAFSEMKY-FIKAIE-LGVHLFLPKPIEPGRLMETLEDFRHI 125 (137)
T ss_dssp CCCEEEECCCCCCHHH-HHHHHH-HCCSEECCSSCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCcChHH-HHHHHh-CCcceeEcCCCCHHHHHHHHHHHHHH
Confidence 4678887766555433 344445 37776777778999999999999886
No 281
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=20.86 E-value=1.2e+02 Score=25.31 Aligned_cols=36 Identities=19% Similarity=0.166 Sum_probs=28.0
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
..++++..+..|...-...+++.|.++|+.|..+-.
T Consensus 28 ~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 63 (236)
T 1zi8_A 28 APVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDL 63 (236)
T ss_dssp EEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECG
T ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccc
Confidence 345666666667777889999999999999877654
No 282
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=20.80 E-value=3.1e+02 Score=25.16 Aligned_cols=109 Identities=13% Similarity=0.050 Sum_probs=59.1
Q ss_pred eEEEEEcCcccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhccCCc
Q 012151 284 SVVYISFGSVIAINKDGFLEIAWGVANS-RMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLAHPAV 362 (470)
Q Consensus 284 ~~I~vs~Gs~~~~~~~~~~~i~~al~~~-~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~~~~~ 362 (470)
.+.+|..|.+. ..++.++.+. +..++.++..+. + .-+.+.++. + +..+-...+++..+++
T Consensus 7 ~vgiiG~G~~g-------~~~~~~l~~~~~~~lvav~d~~~-------~-~~~~~~~~~--g--~~~~~~~~~~l~~~~~ 67 (354)
T 3db2_A 7 GVAAIGLGRWA-------YVMADAYTKSEKLKLVTCYSRTE-------D-KREKFGKRY--N--CAGDATMEALLAREDV 67 (354)
T ss_dssp EEEEECCSHHH-------HHHHHHHTTCSSEEEEEEECSSH-------H-HHHHHHHHH--T--CCCCSSHHHHHHCSSC
T ss_pred eEEEEccCHHH-------HHHHHHHHhCCCcEEEEEECCCH-------H-HHHHHHHHc--C--CCCcCCHHHHhcCCCC
Confidence 47778888765 2466777766 455555553321 0 011121221 1 2235677888876666
Q ss_pred ceeecccC----chhhHHhhhcCCceec-CCCcc--chhh-hHHHHHhhhheeEEcCC
Q 012151 363 GGFWTHSG----WNSTLESMCEGVPMIC-QPYLP--DQMV-NARYVSHFWRVGLHSEW 412 (470)
Q Consensus 363 ~~~I~HGG----~gs~~eal~~GvP~v~-~P~~~--DQ~~-na~rv~~~~G~G~~l~~ 412 (470)
++++.--- .-.+.+|+.+|+++++ -|+.. ++-. -....+++ |+-+.+..
T Consensus 68 D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~-~~~~~v~~ 124 (354)
T 3db2_A 68 EMVIITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKET-GVKFLCGH 124 (354)
T ss_dssp CEEEECSCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHH-CCCEEEEC
T ss_pred CEEEEeCChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHc-CCeEEEee
Confidence 66764433 3346778899998876 35443 3322 23444553 66555544
No 283
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=20.79 E-value=58 Score=32.20 Aligned_cols=39 Identities=21% Similarity=0.230 Sum_probs=26.6
Q ss_pred CCCCCCCCCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 4 RNDSCRMVPRNGRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 4 ~~~~~~m~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
.-||+.|.. +|.|+-.+..| ..||..|+++||+|+++-.
T Consensus 3 ~~~~~~~~~----~IgvIGlG~MG-----~~lA~~La~~G~~V~v~dr 41 (497)
T 2p4q_A 3 HHHHHHMSA----DFGLIGLAVMG-----QNLILNAADHGFTVCAYNR 41 (497)
T ss_dssp ------CCC----SEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CcccccCCC----CEEEEeeHHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 345667877 79999777655 5689999999999987643
No 284
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=20.76 E-value=1.2e+02 Score=26.21 Aligned_cols=30 Identities=17% Similarity=0.234 Sum_probs=22.0
Q ss_pred CCCcEEEeCCCccc-------hHHHHhhcCCCeEEEe
Q 012151 121 SSPCCLITDAFWFF-------THTVAADFKLPTIVLQ 150 (470)
Q Consensus 121 ~~pDlvi~D~~~~~-------~~~vA~~~giP~v~~~ 150 (470)
..||+|++|..... +..+...+++|+|.+.
T Consensus 102 ~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVA 138 (225)
T 2w36_A 102 TKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVA 138 (225)
T ss_dssp SCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred CCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEE
Confidence 37999999976533 3345667799999864
No 285
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=20.75 E-value=60 Score=29.45 Aligned_cols=32 Identities=19% Similarity=0.028 Sum_probs=25.0
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
.++|.|+-.+..| ..+|+.|+++||+|+++..
T Consensus 7 ~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 7 DFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADL 38 (303)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEEC
Confidence 4689999665544 4688999999999998744
No 286
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=20.72 E-value=83 Score=27.44 Aligned_cols=29 Identities=14% Similarity=0.166 Sum_probs=20.8
Q ss_pred CCcEEEeCCCcc--chHHHHhhcCCCeEEEe
Q 012151 122 SPCCLITDAFWF--FTHTVAADFKLPTIVLQ 150 (470)
Q Consensus 122 ~pDlvi~D~~~~--~~~~vA~~~giP~v~~~ 150 (470)
+||+||...... ....--++.|+|++.+.
T Consensus 59 ~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 59 KPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp CCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 999999886542 22334467899999875
No 287
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=20.66 E-value=70 Score=29.10 Aligned_cols=28 Identities=18% Similarity=0.411 Sum_probs=24.3
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEE
Q 012151 17 RVILFPLPFQGHINPMLHLASILYSKGFSVTII 49 (470)
Q Consensus 17 ~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~ 49 (470)
+|.|+-.+.-| .++|+.|.++||+|+++
T Consensus 5 kIgfIGlG~MG-----~~mA~~L~~~G~~v~v~ 32 (300)
T 3obb_A 5 QIAFIGLGHMG-----APMATNLLKAGYLLNVF 32 (300)
T ss_dssp EEEEECCSTTH-----HHHHHHHHHTTCEEEEE
T ss_pred EEEEeeehHHH-----HHHHHHHHhCCCeEEEE
Confidence 69999988777 47899999999999986
No 288
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=20.63 E-value=1.3e+02 Score=26.24 Aligned_cols=32 Identities=19% Similarity=0.173 Sum_probs=25.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 17 RVILFPLPFQGHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 17 ~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
++++++..+.| --.++|+.|+++|++|.++.-
T Consensus 7 k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 38 (257)
T 3imf_A 7 KVVIITGGSSG---MGKGMATRFAKEGARVVITGR 38 (257)
T ss_dssp CEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 57778877643 457899999999999988764
No 289
>2q37_A OHCU decarboxylase; 2-OXO-4-hydroxy-4-carboxy-5-ureidoimidazoline, plant protein, lyase; HET: 3AL; 2.50A {Arabidopsis thaliana} SCOP: a.288.1.1
Probab=20.62 E-value=2.6e+02 Score=23.19 Aligned_cols=55 Identities=13% Similarity=0.034 Sum_probs=41.4
Q ss_pred hhhhHHHHHhhhheeEEcCC-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Q 012151 393 QMVNARYVSHFWRVGLHSEW-KLERMEIERAIRRVMVEAEGQEMRARIMHLKEKVDF 448 (470)
Q Consensus 393 Q~~na~rv~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~ 448 (470)
+..|+++-++. |.--.+.- ..+.++|.+++++-|.|.+-.+++..+.++.+..+.
T Consensus 117 ~~LN~~Ye~kF-GfpFVi~v~G~s~~~IL~~l~~RL~N~~~~E~~~Al~Ev~kIa~~ 172 (181)
T 2q37_A 117 AEWNVLYKKKF-GFIFIICASGRTHAEMLHALKERYENRPIVELEIAAMEQMKITEL 172 (181)
T ss_dssp HHHHHHHHHHH-SSCCCCCCSSCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc-CCeEEEEeCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 56788899995 87766655 688899999999999875545667667766666554
No 290
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=20.61 E-value=52 Score=28.27 Aligned_cols=30 Identities=17% Similarity=0.216 Sum_probs=22.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 17 RVILFPLPFQGHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 17 ~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
.|+|+-.+-- -+.+|..|+++|++|+++--
T Consensus 4 dV~IIGaGpa-----GL~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 4 PIAIIGTGIA-----GLSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp CEEEECCSHH-----HHHHHHHHHHTTCCEEEECS
T ss_pred CEEEECcCHH-----HHHHHHHHHHCCCCEEEEEC
Confidence 3666655543 38899999999999999864
No 291
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=20.61 E-value=2.4e+02 Score=22.34 Aligned_cols=36 Identities=19% Similarity=0.017 Sum_probs=26.6
Q ss_pred EEEEEcCCCcc---ChHHHHHHHHHHHhCCCeEEEEeCC
Q 012151 17 RVILFPLPFQG---HINPMLHLASILYSKGFSVTIIHTD 52 (470)
Q Consensus 17 ~il~~~~~~~G---H~~p~l~La~~L~~rGh~V~~~~~~ 52 (470)
.++++++++.| .-.-+..+.+.|.+.+.++.+++..
T Consensus 22 ~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~ 60 (170)
T 2o6l_A 22 GVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDG 60 (170)
T ss_dssp CEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCS
T ss_pred CEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECC
Confidence 46778888776 4455677888887778888887764
No 292
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=20.55 E-value=1e+02 Score=25.01 Aligned_cols=28 Identities=21% Similarity=0.240 Sum_probs=22.3
Q ss_pred EEEEEcCcccccCHHHHHHHHHHHHhCC
Q 012151 285 VVYISFGSVIAINKDGFLEIAWGVANSR 312 (470)
Q Consensus 285 ~I~vs~Gs~~~~~~~~~~~i~~al~~~~ 312 (470)
+.|+++||-...+.+.++..+.++++..
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCC
Confidence 6799999998766677777788887753
No 293
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=20.54 E-value=83 Score=24.80 Aligned_cols=35 Identities=14% Similarity=0.037 Sum_probs=28.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTD 52 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 52 (470)
..+++++..+. =+-|++++++.|.++|.+|+++ ..
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~ 52 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HV 52 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EE
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-Ee
Confidence 34788877765 4899999999999999999998 53
No 294
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=20.54 E-value=1.3e+02 Score=26.65 Aligned_cols=33 Identities=27% Similarity=0.317 Sum_probs=25.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHT 51 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~ 51 (470)
.++++++..+.| --.++|+.|+++|++|.++..
T Consensus 29 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 29 RPVAIVTGGRRG---IGLGIARALAASGFDIAITGI 61 (280)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEecCCCH---HHHHHHHHHHHCCCeEEEEeC
Confidence 467777776643 346899999999999998864
No 295
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=20.53 E-value=1.4e+02 Score=27.33 Aligned_cols=74 Identities=16% Similarity=0.247 Sum_probs=49.0
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCcccCCCchhHHHHhcCCceeeeccChHhhhc-cCCcceeecccCchhh
Q 012151 296 INKDGFLEIAWGVANSRMPFLWVVRPGLVSGAEWVEPLPKGFLEMLDGRGCIVKWAPQQEVLA-HPAVGGFWTHSGWNST 374 (470)
Q Consensus 296 ~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~p~~~lL~-~~~~~~~I~HGG~gs~ 374 (470)
.+.+....+.+|+.....+.||.+.++.... ++.++++...+-. +|.. ||=++-...+
T Consensus 64 td~~Ra~dL~~a~~Dp~i~aI~~~rGGyga~-------------------rlLp~LD~~~i~~a~PK~--~iGySDiTaL 122 (311)
T 1zl0_A 64 TVEQRLEDLHNAFDMPDITAVWCLRGGYGCG-------------------QLLPGLDWGRLQAASPRP--LIGFSDISVL 122 (311)
T ss_dssp CHHHHHHHHHHHHHSTTEEEEEESCCSSCGG-------------------GGTTTCCHHHHHHSCCCC--EEECGGGHHH
T ss_pred CHHHHHHHHHHHHhCCCCCEEEEccCCcCHH-------------------HHhhccchhhhhccCCCE--EEEEchhHHH
Confidence 4556677799999999999999987653111 4455566555555 6666 7777777777
Q ss_pred HHhhh-cCCceecCCCc
Q 012151 375 LESMC-EGVPMICQPYL 390 (470)
Q Consensus 375 ~eal~-~GvP~v~~P~~ 390 (470)
+-+++ .|++.+-=|+.
T Consensus 123 ~~al~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 123 LSAFHRHGLPAIHGPVA 139 (311)
T ss_dssp HHHHHHTTCCEEECCCG
T ss_pred HHHHHHcCCcEEECHhh
Confidence 77765 36666555543
No 296
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=20.51 E-value=65 Score=28.50 Aligned_cols=30 Identities=27% Similarity=0.337 Sum_probs=23.2
Q ss_pred EEcCCCccChHHHHHHHHHHHhCCCeEEEE
Q 012151 20 LFPLPFQGHINPMLHLASILYSKGFSVTII 49 (470)
Q Consensus 20 ~~~~~~~GH~~p~l~La~~L~~rGh~V~~~ 49 (470)
++.++..|+-.-+..+++.|+++|++|..+
T Consensus 55 lllHG~~~s~~~~~~la~~La~~Gy~Via~ 84 (281)
T 4fbl_A 55 LVSHGFTGSPQSMRFLAEGFARAGYTVATP 84 (281)
T ss_dssp EEECCTTCCGGGGHHHHHHHHHTTCEEEEC
T ss_pred EEECCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 334566677777888999999999998764
No 297
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=20.47 E-value=1.6e+02 Score=24.09 Aligned_cols=33 Identities=21% Similarity=0.430 Sum_probs=23.6
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 012151 16 RRVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTD 52 (470)
Q Consensus 16 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 52 (470)
++|++.-. .|-+ -..|++.|.++||+|+.+.-.
T Consensus 4 ~~ilVtGa--tG~i--G~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIFGA--TGQT--GLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CEEEEEST--TSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEcC--CcHH--HHHHHHHHHHCCCeEEEEEeC
Confidence 46766633 3433 467899999999999998753
No 298
>1ny5_A Transcriptional regulator (NTRC family); AAA+ ATPase, sigma54 activator, bacterial transcription, DIM transcription; HET: ADP; 2.40A {Aquifex aeolicus} SCOP: c.23.1.1 c.37.1.20 PDB: 1ny6_A* 3m0e_A* 1zy2_A*
Probab=20.38 E-value=1.7e+02 Score=27.61 Aligned_cols=61 Identities=13% Similarity=-0.037 Sum_probs=39.1
Q ss_pred hcCCceecCCCccchhhhHHHHHhhhheeEEcCCcccHHHHHHHHHHHhccchhHHHHHHHHHHHH
Q 012151 379 CEGVPMICQPYLPDQMVNARYVSHFWRVGLHSEWKLERMEIERAIRRVMVEAEGQEMRARIMHLKE 444 (470)
Q Consensus 379 ~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~ 444 (470)
...+|+|++.-..+. ..+...-+ .|+--.+.+.++.++|..+|++++.. ...++....+++
T Consensus 70 ~~~~pvIvlT~~~~~-~~~~~a~~-~Ga~dyl~KP~~~~~L~~~i~~~l~~---~~l~~~~~~l~~ 130 (387)
T 1ny5_A 70 SPETEVIVITGHGTI-KTAVEAMK-MGAYDFLTKPCMLEEIELTINKAIEH---RKLRKENELLRR 130 (387)
T ss_dssp CTTSEEEEEEETTCH-HHHHHHHT-TTCCEEEEESCCHHHHHHHHHHHHHH---HHHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCCH-HHHHHHHh-cCceEEecCCCCHHHHHHHHHHHHHH---HHHHHHHHHhhh
Confidence 346788887655543 44445555 37665666568999999999999875 444443333433
No 299
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=20.13 E-value=1e+02 Score=27.74 Aligned_cols=37 Identities=16% Similarity=0.033 Sum_probs=30.5
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 012151 17 RVILFPLPFQGHINPMLHLASILYSKGFSVTIIHTDF 53 (470)
Q Consensus 17 ~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~ 53 (470)
.|+|..-++-|-..-...||..|+++|++|.++=.+.
T Consensus 43 vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 79 (307)
T 3end_A 43 VFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 79 (307)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred EEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 5556655566899999999999999999999987654
No 300
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=20.05 E-value=1.3e+02 Score=28.94 Aligned_cols=42 Identities=19% Similarity=0.167 Sum_probs=35.6
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEeCCCCCc
Q 012151 15 GRRVILFPLPFQGHINPMLHLASILYSK-GFSVTIIHTDFNFS 56 (470)
Q Consensus 15 ~~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~V~~~~~~~~~~ 56 (470)
+..|+++..++.|-..-...||..|+++ |++|.++..+.+..
T Consensus 100 ~~vI~ivG~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r~ 142 (433)
T 2xxa_A 100 PAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRP 142 (433)
T ss_dssp SEEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSST
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCCc
Confidence 3467777777889999999999999999 99999999876554
Done!