Your job contains 1 sequence.
>012155
MSGSKSNLGTNISSSDLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQ
ELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPS
KAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKP
EKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSEKSATTGEGSSDPNSRRDSG
SGSCSSKEMIPHRDHEVSGAQVAAAMSSYGAIDMQQLKSDHFSFVPFRKSFDEVGIGEAS
TAREAPAHGTCEDIRDHHQRPHHHLAHDHRQQQQQHQQQHQQQQQQQHHTHHQQIATTAF
HISRPSHPISTIISPSPLHHTSIILDEDSYHVSRIMLQNESFQQQQQQQQQQQQHHKLGG
RSASGLEELIMGCTSSSDIKEESSMTNPQEAEWLKYSSFWPDPDNQDHHG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012155
(470 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2118264 - symbol:NAC075 "NAC domain containing... 1063 1.5e-142 3
TAIR|locus:2165031 - symbol:NAC099 "NAC domain containing... 912 4.2e-98 2
TAIR|locus:2121387 - symbol:NAC073 "NAC domain containing... 772 1.1e-76 1
TAIR|locus:2032580 - symbol:NAC010 "NAC domain containing... 721 2.9e-71 1
TAIR|locus:2031170 - symbol:SOG1 "SUPPRESSOR OF GAMMA RAD... 572 1.8e-55 1
TAIR|locus:2145743 - symbol:NAC085 "NAC domain containing... 529 6.5e-51 1
TAIR|locus:2084148 - symbol:NAC044 "NAC domain containing... 503 3.7e-48 1
TAIR|locus:2204833 - symbol:NAC003 "NAC domain containing... 175 1.5e-10 1
TAIR|locus:2204783 - symbol:NAC004 "NAC domain containing... 172 2.5e-10 1
TAIR|locus:2184742 - symbol:NAC082 "NAC domain containing... 169 1.1e-09 1
TAIR|locus:2037920 - symbol:NAC014 "NAC 014" species:3702... 168 2.4e-09 1
TAIR|locus:1009023241 - symbol:AT3G12977 species:3702 "Ar... 159 3.4e-09 1
TAIR|locus:2061082 - symbol:NAC038 "NAC domain containing... 158 7.0e-09 1
TAIR|locus:2128013 - symbol:NTL9 "NAC transcription facto... 158 2.2e-08 1
TAIR|locus:2019833 - symbol:SMB "SOMBRERO" species:3702 "... 154 3.1e-08 1
TAIR|locus:2154684 - symbol:CUC2 "CUP-SHAPED COTYLEDON 2"... 154 3.2e-08 1
TAIR|locus:2124014 - symbol:RD26 "RESPONSIVE TO DESICCATI... 152 3.3e-08 1
TAIR|locus:2009729 - symbol:NAC028 "NAC domain containing... 150 4.5e-08 2
TAIR|locus:2090186 - symbol:NAC2 "NAC domain containing p... 152 4.9e-08 1
TAIR|locus:2020123 - symbol:NAC020 "NAC domain containing... 148 8.6e-08 1
TAIR|locus:2026232 - symbol:ANAC026 "Arabidopsis NAC doma... 150 9.8e-08 1
TAIR|locus:2089764 - symbol:NAC057 "NAC domain containing... 144 1.2e-07 1
TAIR|locus:2100845 - symbol:NAC048 "NAC domain containing... 148 1.2e-07 1
TAIR|locus:2202028 - symbol:NAC007 "NAC 007" species:3702... 148 1.7e-07 1
TAIR|locus:2075815 - symbol:NAC053 "AT3G10500" species:37... 150 1.8e-07 1
TAIR|locus:2089205 - symbol:AT3G12910 species:3702 "Arabi... 145 1.9e-07 1
TAIR|locus:2012035 - symbol:NAC1 "NAC domain containing p... 144 3.0e-07 1
TAIR|locus:2153899 - symbol:TIP "TCV-interacting protein"... 146 3.6e-07 1
TAIR|locus:2121323 - symbol:NAC074 "NAC domain containing... 144 3.6e-07 1
TAIR|locus:2011516 - symbol:NAM "NO APICAL MERISTEM" spec... 143 3.8e-07 1
TAIR|locus:2142285 - symbol:NAC096 "NAC domain containing... 140 6.5e-07 1
TAIR|locus:2167155 - symbol:NAC086 "NAC domain containing... 144 6.5e-07 1
TAIR|locus:2184342 - symbol:NAC2 "NAC domain containing p... 148 7.4e-07 2
TAIR|locus:2167923 - symbol:NAC101 "NAC-domain protein 10... 141 7.7e-07 1
TAIR|locus:2095908 - symbol:NAC047 "NAC domain containing... 141 8.3e-07 1
TAIR|locus:2060979 - symbol:VND1 "vascular related NAC-do... 141 8.6e-07 1
TAIR|locus:2122219 - symbol:NAC076 "NAC domain containing... 140 1.2e-06 1
TAIR|locus:2172334 - symbol:ANAC087 "Arabidopsis NAC doma... 139 1.2e-06 1
UNIPROTKB|Q5Z6B6 - symbol:NAC76 "NAC domain-containing pr... 137 1.2e-06 1
TAIR|locus:2095958 - symbol:NAC046 "NAC domain containing... 139 1.2e-06 1
TAIR|locus:2083656 - symbol:CUC1 "CUP-SHAPED COTYLEDON1" ... 138 1.3e-06 1
TAIR|locus:2141075 - symbol:NAC071 "NAC domain containing... 136 1.3e-06 1
TAIR|locus:2198225 - symbol:ATAF1 species:3702 "Arabidops... 136 1.8e-06 1
TAIR|locus:2155046 - symbol:NAC105 "NAC domain containing... 136 1.9e-06 1
TAIR|locus:2011736 - symbol:CUC3 "CUP SHAPED COTYLEDON3" ... 137 2.0e-06 1
TAIR|locus:2196641 - symbol:NAC015 "NAC domain containing... 136 2.1e-06 1
TAIR|locus:2009096 - symbol:NAC017 "NAC domain containing... 140 2.3e-06 1
TAIR|locus:2044360 - symbol:NST1 "NAC SECONDARY WALL THI... 136 3.1e-06 1
TAIR|locus:2117017 - symbol:NAC067 "NAC domain containing... 133 4.5e-06 1
TAIR|locus:2075835 - symbol:NAC052 "NAC domain containing... 135 6.0e-06 1
TAIR|locus:2026114 - symbol:NAC016 "NAC domain containing... 135 8.8e-06 1
TAIR|locus:2160324 - symbol:NAC080 "NAC domain containing... 131 9.2e-06 1
TAIR|locus:2079562 - symbol:NAC066 "NAC domain protein 66... 131 9.5e-06 1
TAIR|locus:2016049 - symbol:VND7 "vascular related NAC-do... 130 1.1e-05 1
TAIR|locus:2095007 - symbol:NAC058 "NAC domain containing... 129 1.4e-05 1
TAIR|locus:2097720 - symbol:NAC045 "NAC domain containing... 132 1.4e-05 1
TAIR|locus:2163153 - symbol:NAC100 "NAC domain containing... 128 2.1e-05 1
TAIR|locus:2090176 - symbol:NAC3 "NAC domain containing p... 127 2.4e-05 1
TAIR|locus:2164895 - symbol:NAC6 "NAC domain containing p... 124 4.1e-05 1
TAIR|locus:2122804 - symbol:NAC070 "NAC domain containing... 125 4.7e-05 1
TAIR|locus:2114678 - symbol:NAC062 "NAC domain containing... 127 4.9e-05 1
TAIR|locus:2033745 - symbol:NAC011 "NAC domain containing... 123 5.2e-05 1
TAIR|locus:2075855 - symbol:NAC050 "NAC domain containing... 116 6.1e-05 2
TAIR|locus:2116972 - symbol:NTM1 "NAC with transmembrane ... 126 6.4e-05 1
TAIR|locus:2116982 - symbol:NAC069 "NAC domain containing... 128 6.5e-05 2
TAIR|locus:2159073 - symbol:NAC084 "NAC domain containing... 118 7.3e-05 1
TAIR|locus:504956335 - symbol:ATAF2 species:3702 "Arabido... 121 8.8e-05 1
TAIR|locus:2087037 - symbol:NAC3 "NAC domain containing p... 122 8.8e-05 1
TAIR|locus:2202820 - symbol:FEZ "FEZ" species:3702 "Arabi... 123 0.00011 1
TAIR|locus:2160634 - symbol:NAC102 "NAC domain containing... 120 0.00014 1
TAIR|locus:2204685 - symbol:NAC032 "NAC domain containing... 118 0.00015 1
TAIR|locus:2011531 - symbol:NAC019 "NAC domain containing... 120 0.00015 1
TAIR|locus:2164391 - symbol:NAC103 "NAC domain containing... 120 0.00018 1
TAIR|locus:2176372 - symbol:NAC090 "NAC domain containing... 113 0.00044 1
TAIR|locus:2007166 - symbol:NAP "NAC-like, activated by A... 114 0.00048 1
TAIR|locus:2056266 - symbol:LOV1 "LONG VEGETATIVE PHASE 1... 117 0.00052 1
TAIR|locus:2179877 - symbol:NAC083 "NAC domain containing... 113 0.00054 1
TAIR|locus:2051053 - symbol:NAC041 "NAC domain containing... 113 0.00063 1
TAIR|locus:2035604 - symbol:NAC012 "NAC domain containing... 114 0.00087 1
>TAIR|locus:2118264 [details] [associations]
symbol:NAC075 "NAC domain containing protein 75"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161574 GO:GO:0003677 GO:GO:0003700 HSSP:Q9C932
SUPFAM:SSF101941 HOGENOM:HOG000238154 IPI:IPI00536626 PIR:T13434
RefSeq:NP_194652.1 UniGene:At.31945 ProteinModelPortal:Q9M0F8
SMR:Q9M0F8 PRIDE:Q9M0F8 EnsemblPlants:AT4G29230.1 GeneID:829044
KEGG:ath:AT4G29230 TAIR:At4g29230 eggNOG:NOG330928
InParanoid:Q9M0F8 OMA:IMGCTST PhylomeDB:Q9M0F8
ProtClustDB:CLSN2685343 ArrayExpress:Q9M0F8 Genevestigator:Q9M0F8
Uniprot:Q9M0F8
Length = 498
Score = 1063 (379.3 bits), Expect = 1.5e-142, Sum P(3) = 1.5e-142
Identities = 197/229 (86%), Positives = 209/229 (91%)
Query: 4 SKSNLGTNISSSDLIDAKLEEHQLCGSKQCPGCGHKLEAKP-DWLGLPAGVKFDPTDQEL 62
+KSN +++ SD+IDAK+EEHQLCGSK+CP CGHKLE KP DW+GLPAGVKFDPTDQEL
Sbjct: 2 NKSNPAGSVTGSDIIDAKIEEHQLCGSKKCPSCGHKLEGKPQDWVGLPAGVKFDPTDQEL 61
Query: 63 IDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKA 122
I+HLEAKV AKD K HPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKA
Sbjct: 62 IEHLEAKVLAKDF-KSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKA 120
Query: 123 YTTGTRKRRKIQTECD--LQG----GETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGK 176
YTTGTRKRRKIQTECD LQG GETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGK
Sbjct: 121 YTTGTRKRRKIQTECDNNLQGSSSSGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGK 180
Query: 177 NRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSEKSAT 225
NRKPEKTNWVMHQYHLG HEEEKEGELVVSKIFYQTQPRQCNWS +++
Sbjct: 181 NRKPEKTNWVMHQYHLGTHEEEKEGELVVSKIFYQTQPRQCNWSSSTSS 229
Score = 267 (99.0 bits), Expect = 1.5e-142, Sum P(3) = 1.5e-142
Identities = 57/97 (58%), Positives = 67/97 (69%)
Query: 384 ILDEDSYHVSRIMLQNESFXXXXXXXXXXXXHH---KLGGRSASGLEELIMGCTSSS--- 437
ILD++ YHV RI+L NE++ H K+GGRSASGLEELIMGCTSS+
Sbjct: 402 ILDDNPYHVHRILLPNENYQTQQQLRQEGEEEHNDGKMGGRSASGLEELIMGCTSSTTHH 461
Query: 438 DIKE-ESSMTNPQEAEWLKYSSFWPDPD---NQDHHG 470
D+K+ SSM N QEAEWLKYS+FWP PD NQDHHG
Sbjct: 462 DVKDGSSSMGNQQEAEWLKYSTFWPAPDSSDNQDHHG 498
Score = 100 (40.3 bits), Expect = 1.5e-142, Sum P(3) = 1.5e-142
Identities = 29/71 (40%), Positives = 35/71 (49%)
Query: 251 PHRDHEVSGA-----QVAAAMSSYGAIDMQQLKSDHFSFVPFRKSFDEVGIGEASTAREA 305
P+R E+ G VAAA ++ A + D SFVPF KSFDEV RE
Sbjct: 275 PNRSDEIGGVGGGVMAVAAAAAAVAA-GLPSYAMDQLSFVPFMKSFDEVA------RRET 327
Query: 306 P--AHGTCEDI 314
P H TCED+
Sbjct: 328 PQTGHATCEDV 338
>TAIR|locus:2165031 [details] [associations]
symbol:NAC099 "NAC domain containing protein 99"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 HSSP:Q9C932 SUPFAM:SSF101941
EMBL:AB013392 HOGENOM:HOG000238154 IPI:IPI00541902
RefSeq:NP_200473.1 UniGene:At.55590 ProteinModelPortal:Q9FJU6
SMR:Q9FJU6 EnsemblPlants:AT5G56620.1 GeneID:835763
KEGG:ath:AT5G56620 TAIR:At5g56620 eggNOG:NOG322066
InParanoid:Q9FJU6 OMA:SKGRENQ PhylomeDB:Q9FJU6
ProtClustDB:CLSN2916784 Genevestigator:Q9FJU6 Uniprot:Q9FJU6
Length = 386
Score = 912 (326.1 bits), Expect = 4.2e-98, Sum P(2) = 4.2e-98
Identities = 173/224 (77%), Positives = 195/224 (87%)
Query: 13 SSSDLIDAKLEEHQ-LCGSKQCPGCGHKLEA--KPDWLGLPAGVKFDPTDQELIDHLEAK 69
S +LID+KLEEH LCGSK CPGCG ++A KP+W+GLPAGVKFDPTDQELI+HLEAK
Sbjct: 4 SKCNLIDSKLEEHHHLCGSKHCPGCGRMIQAATKPNWVGLPAGVKFDPTDQELIEHLEAK 63
Query: 70 VEAKDMVKP----HPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTT 125
V+ K+ K HPLIDEFIPTI+GEDGICYTHP+KLPGVTRDGLS+HFFH+PS+AYTT
Sbjct: 64 VKGKEENKKWSSSHPLIDEFIPTIDGEDGICYTHPQKLPGVTRDGLSKHFFHKPSRAYTT 123
Query: 126 GTRKRRKI-QTECD--LQGG-ETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPE 181
GTRKRRKI QT+ D L G ETRWHKTGKTRPVM+NG+Q+GCKKILVLYTNFGKNR+PE
Sbjct: 124 GTRKRRKIIQTDHDSELTGSSETRWHKTGKTRPVMINGQQRGCKKILVLYTNFGKNRRPE 183
Query: 182 KTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQC----NWSE 221
KTNWVMHQYHLG +EEE+EGELVVSKIFYQTQPRQC NWS+
Sbjct: 184 KTNWVMHQYHLGINEEEREGELVVSKIFYQTQPRQCVSNTNWSD 227
Score = 82 (33.9 bits), Expect = 4.2e-98, Sum P(2) = 4.2e-98
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 260 AQVAAAMSSYGAIDMQQLKSDHFSFVPFRKSFDEVGIGEASTAREAP-AHGTCEDIRD 316
+ VAA + S G+ D+ + H P +SFDE G EAS RE GTCE++ D
Sbjct: 244 SSVAATLQSLGSGDVVSRVNMH----PHTRSFDE-GTAEASKGRENQHVSGTCEEVHD 296
>TAIR|locus:2121387 [details] [associations]
symbol:NAC073 "NAC domain containing protein 73"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:2000652 "regulation
of secondary cell wall biogenesis" evidence=IMP] [GO:0010413
"glucuronoxylan metabolic process" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 EMBL:AL021749
EMBL:AL161572 HSSP:Q9C932 SUPFAM:SSF101941 GO:GO:2000652
HOGENOM:HOG000238154 EMBL:DQ056658 IPI:IPI00545560 PIR:T04621
RefSeq:NP_194579.1 UniGene:At.54535 ProteinModelPortal:O49459
SMR:O49459 STRING:O49459 EnsemblPlants:AT4G28500.1 GeneID:828968
KEGG:ath:AT4G28500 TAIR:At4g28500 eggNOG:NOG298668
InParanoid:O49459 OMA:YGKQKKP PhylomeDB:O49459
ProtClustDB:CLSN2916009 ArrayExpress:O49459 Genevestigator:O49459
Uniprot:O49459
Length = 305
Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 144/203 (70%), Positives = 162/203 (79%)
Query: 31 KQCPGCGHKLEAKP-----DWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEF 85
K CP CGH + D GLPAGVKFDPTDQE+++HLE KV D K HPLIDEF
Sbjct: 36 KTCPSCGHNFKFHEQAGIHDLPGLPAGVKFDPTDQEVLEHLEGKVR-DDAKKLHPLIDEF 94
Query: 86 IPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETR 145
I TI+GE+GICYTHPEKLPGV +DG RHFFHRPSKAYTTGTRKRRK+ T+ D+ GGETR
Sbjct: 95 IRTIDGENGICYTHPEKLPGVNKDGTVRHFFHRPSKAYTTGTRKRRKVHTDSDV-GGETR 153
Query: 146 WHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVV 205
WHKTGKTRPV+ G+ +G KKILVLYTN+GK +KPEKTNWVMHQYHLG EEEKEGELVV
Sbjct: 154 WHKTGKTRPVLAGGRVRGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGTSEEEKEGELVV 213
Query: 206 SKIFYQTQPRQCNWSEKSATTGE 228
SK+FYQTQPRQC S +A T +
Sbjct: 214 SKVFYQTQPRQCGGSVAAAATAK 236
>TAIR|locus:2032580 [details] [associations]
symbol:NAC010 "NAC domain containing protein 10"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:2000652 "regulation
of secondary cell wall biogenesis" evidence=IMP] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016926 "protein desumoylation" evidence=RCA]
[GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA]
InterPro:IPR003441 Pfam:PF02365 PROSITE:PS51005 EMBL:CP002684
GO:GO:0005634 GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
SUPFAM:SSF101941 GO:GO:2000652 IPI:IPI00526864 RefSeq:NP_564309.1
UniGene:At.23603 ProteinModelPortal:F4HY61 SMR:F4HY61 PRIDE:F4HY61
DNASU:839747 EnsemblPlants:AT1G28470.1 GeneID:839747
KEGG:ath:AT1G28470 OMA:GHETRWH Uniprot:F4HY61
Length = 314
Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
Identities = 136/197 (69%), Positives = 158/197 (80%)
Query: 33 CPGCGHKLEA-KPDWLG-------LPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDE 84
CP CGHKL + D +G LPAGVKFDP+D+E++ HLEAKV + D K HPLIDE
Sbjct: 53 CPSCGHKLHHHQDDQVGSIKDLPSLPAGVKFDPSDKEILMHLEAKVSS-DKRKLHPLIDE 111
Query: 85 FIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGET 144
FIPT+EGE+GICYTHPEKLPGV++DG RHFFHRPSKAYTTGTRKRRK+ T D +G ET
Sbjct: 112 FIPTLEGENGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVST--DEEGHET 169
Query: 145 RWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELV 204
RWHKTGKTRPV+ + G KKILVLYTN+G+ +KPEKTNWVMHQYHLG E+EK+GE V
Sbjct: 170 RWHKTGKTRPVLSQSGETGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSSEDEKDGEPV 229
Query: 205 VSKIFYQTQPRQCNWSE 221
+SK+FYQTQPRQC E
Sbjct: 230 LSKVFYQTQPRQCGSME 246
>TAIR|locus:2031170 [details] [associations]
symbol:SOG1 "SUPPRESSOR OF GAMMA RADIATION 1"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0000077 "DNA damage checkpoint"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0010332 "response to gamma radiation" evidence=IMP]
InterPro:IPR003441 Pfam:PF02365 PROSITE:PS51005 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0000077 EMBL:AC079281
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010332
EMBL:AC084221 GO:GO:0040020 HSSP:Q9C932 SUPFAM:SSF101941
EMBL:BT010450 EMBL:AK221266 EMBL:AK228316 IPI:IPI00530129
PIR:C86386 RefSeq:NP_564238.2 UniGene:At.41316
ProteinModelPortal:Q6NQK2 SMR:Q6NQK2 PaxDb:Q6NQK2 PRIDE:Q6NQK2
EnsemblPlants:AT1G25580.1 GeneID:839145 KEGG:ath:AT1G25580
TAIR:At1g25580 eggNOG:NOG279712 HOGENOM:HOG000238154
InParanoid:Q6NQK2 OMA:LEFGSQD PhylomeDB:Q6NQK2
ProtClustDB:CLSN2680219 Genevestigator:Q6NQK2 Uniprot:Q6NQK2
Length = 449
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 112/190 (58%), Positives = 135/190 (71%)
Query: 30 SKQCPGCGHKLEAKP---DWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFI 86
S+ CP C H ++ DW GLP GVKFDP+D E+I HL AK + HP IDEFI
Sbjct: 36 SRHCPKCQHVIDNSDVVDDWPGLPRGVKFDPSDPEIIWHLLAKSGLSGL-SSHPFIDEFI 94
Query: 87 PTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRW 146
PT+ +DGICYTHP+ LPGV DG HFFH+ KAY+TGTRKRRKI + D G+ RW
Sbjct: 95 PTVNQDDGICYTHPKNLPGVKSDGTVSHFFHKAIKAYSTGTRKRRKIHDD-DF--GDVRW 151
Query: 147 HKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVS 206
HKTG+T+PV+++G Q+GCKKI+VLY K KTNWVMHQYHLG E+EKEG+ VVS
Sbjct: 152 HKTGRTKPVVLDGVQRGCKKIMVLYGG-----KAVKTNWVMHQYHLGIEEDEKEGDYVVS 206
Query: 207 KIFYQTQPRQ 216
KIFYQ QP+Q
Sbjct: 207 KIFYQ-QPQQ 215
>TAIR|locus:2145743 [details] [associations]
symbol:NAC085 "NAC domain containing protein 85"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 EMBL:AL163817 SUPFAM:SSF101941
HOGENOM:HOG000238154 IPI:IPI00531966 PIR:T48622 RefSeq:NP_196953.1
UniGene:At.54844 ProteinModelPortal:Q9LY80 SMR:Q9LY80
EnsemblPlants:AT5G14490.1 GeneID:831300 KEGG:ath:AT5G14490
TAIR:At5g14490 eggNOG:NOG302674 InParanoid:Q9LY80 OMA:KRRRITP
PhylomeDB:Q9LY80 ProtClustDB:CLSN2685009 Genevestigator:Q9LY80
Uniprot:Q9LY80
Length = 350
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 116/234 (49%), Positives = 153/234 (65%)
Query: 8 LGTNISSSDLIDAKLEEHQLCGSK-QCPGCGHKLEAK---PDWLGLPAGVKFDPTDQELI 63
+ N+ ++ L A L+ CG+ C C ++++ W GLP GVKF+PTD+E+I
Sbjct: 15 ISRNVKNASLSSA-LQIKD-CGAYINCFNCSYRIDNSNVLTPWPGLPKGVKFEPTDEEVI 72
Query: 64 DHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAY 123
+HLEAK D +KPH LI +FI ++ + GI YTHP+ LPGV++DG S FF++ + AY
Sbjct: 73 EHLEAKCGI-DGLKPHLLIQDFICSVTQDVGINYTHPQNLPGVSKDGTSVFFFNKTAHAY 131
Query: 124 TTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKT 183
G RKRR+I T L+ RWHKTG+T+PVM+NG QKGCKKI+VLY + K KPEK+
Sbjct: 132 QNGQRKRRRI-TPTSLKDDTVRWHKTGQTKPVMLNGIQKGCKKIMVLYKSARKGFKPEKS 190
Query: 184 NWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQ----CNWSEKSATTGEGSSDP 233
NWV+HQYHLG EE + GE VVSKI YQ QP+Q + SE S G G S P
Sbjct: 191 NWVLHQYHLGT-EEGEIGEYVVSKITYQ-QPKQQEKTIDESESSGVRG-GPSTP 241
>TAIR|locus:2084148 [details] [associations]
symbol:NAC044 "NAC domain containing protein 44"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003677 GO:GO:0003700 EMBL:AC009325 SUPFAM:SSF101941
HOGENOM:HOG000238154 ProtClustDB:CLSN2685009 IPI:IPI00543494
RefSeq:NP_186809.1 UniGene:At.50146 ProteinModelPortal:Q9SS95
SMR:Q9SS95 PaxDb:Q9SS95 PRIDE:Q9SS95 EnsemblPlants:AT3G01600.1
GeneID:819872 KEGG:ath:AT3G01600 TAIR:At3g01600 eggNOG:NOG294238
InParanoid:Q9SS95 OMA:TEDVGIN PhylomeDB:Q9SS95
Genevestigator:Q9SS95 Uniprot:Q9SS95
Length = 370
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 102/206 (49%), Positives = 138/206 (66%)
Query: 26 QLCGSK-QCPGCGHKLEAKP---DWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPL 81
Q CG+ +CP C ++++ W GLP GVKF+PTD+++I+ LEAK +PH L
Sbjct: 28 QDCGAHIKCPNCTYRIDNSNVLIPWPGLPKGVKFEPTDEDIIEFLEAKCGIGGS-EPHVL 86
Query: 82 IDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQG 141
I+EFI + + GI YTHP+ LPG +DG+S FFH+ +AY TG RKRRKI T +
Sbjct: 87 IEEFIRPVTEDVGINYTHPQNLPGANKDGVSVFFFHKTVQAYGTGQRKRRKI-TPTLVND 145
Query: 142 GETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEG 201
RWHKTG+T+PVM++G Q+GCKKI+VLY + K KPEK+NWV+HQYHLG E ++ G
Sbjct: 146 EPVRWHKTGRTKPVMLSGVQRGCKKIMVLYKSARKGTKPEKSNWVLHQYHLGT-EGKEIG 204
Query: 202 ELVVSKIFYQTQPRQCNWSEKSATTG 227
+ VVSKI YQ Q N E +++G
Sbjct: 205 DYVVSKITYQQQKLGENPDEGESSSG 230
>TAIR|locus:2204833 [details] [associations]
symbol:NAC003 "NAC domain containing protein 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0016926 "protein
desumoylation" evidence=RCA] [GO:0050665 "hydrogen peroxide
biosynthetic process" evidence=RCA] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 HSSP:Q9C932
HOGENOM:HOG000237406 SUPFAM:SSF101941 EMBL:U89959 EMBL:BT020269
EMBL:BT022063 EMBL:AB493423 IPI:IPI00532928 RefSeq:NP_171725.1
UniGene:At.70442 ProteinModelPortal:Q5PP28 SMR:Q5PP28
EnsemblPlants:AT1G02220.1 GeneID:839476 KEGG:ath:AT1G02220
TAIR:At1g02220 eggNOG:NOG253282 OMA:QETIKKK PhylomeDB:Q5PP28
ProtClustDB:CLSN2679315 Genevestigator:Q5PP28 Uniprot:Q5PP28
Length = 394
Score = 175 (66.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 56/184 (30%), Positives = 91/184 (49%)
Query: 50 PAGVKFDPTDQELI-DHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTR 108
P G++F PTD+E++ D+L K +D H +D FI T+ +C P +LP +R
Sbjct: 4 PVGLRFCPTDEEIVVDYLWPKNSDRDT--SH--VDRFINTVP----VCRLDPWELPCQSR 55
Query: 109 DGLS--RHFFHRPSK-AYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCK 165
L F RP + Y G ++ RK ++ W TG+ +P+M N +Q G K
Sbjct: 56 IKLKDVAWCFFRPKENKYGRGDQQMRKTKSGF--------WKSTGRPKPIMRNRQQIGEK 107
Query: 166 KILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSEKSAT 225
KIL+ YT+ K K++WV+H+YH H + + K+ + R+ + S S++
Sbjct: 108 KILMFYTS-----KESKSDWVIHEYHGFSHNQMMM-TYTLCKVMFNGGMREKSSSSPSSS 161
Query: 226 TGEG 229
G
Sbjct: 162 GVSG 165
>TAIR|locus:2204783 [details] [associations]
symbol:NAC004 "NAC domain containing protein 4"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 HSSP:Q9C932
HOGENOM:HOG000237406 SUPFAM:SSF101941 EMBL:U89959
ProtClustDB:CLSN2679315 EMBL:AB493424 IPI:IPI00517139
RefSeq:NP_171726.2 UniGene:At.71673 ProteinModelPortal:O81913
SMR:O81913 EnsemblPlants:AT1G02230.1 GeneID:837630
KEGG:ath:AT1G02230 TAIR:At1g02230 eggNOG:NOG278363 OMA:HEYHATS
PhylomeDB:O81913 Genevestigator:O81913 Uniprot:O81913
Length = 359
Score = 172 (65.6 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 51/149 (34%), Positives = 74/149 (49%)
Query: 50 PAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVT-- 107
P G +F P D+E++DH + K++ +DE I T++ IC P LP +
Sbjct: 4 PVGFRFRPNDEEIVDHY---LRPKNLDSDTSHVDEVISTVD----ICSFEPWDLPSKSMI 56
Query: 108 --RDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMV---NGKQK 162
RDG+ +FF Y G ++RR+ + W KTGKT VM N ++
Sbjct: 57 KSRDGVW-YFFSVKEMKYNRGDQQRRRTNSGF--------WKKTGKTMTVMRKRGNREKI 107
Query: 163 GCKKILVLYTNFGKNRKPEKTNWVMHQYH 191
G K++LV KNR KT+WVMH+YH
Sbjct: 108 GEKRVLVF-----KNRDGSKTDWVMHEYH 131
>TAIR|locus:2184742 [details] [associations]
symbol:NAC082 "NAC domain containing protein 82"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002688 GO:GO:0003677 GO:GO:0003700
EMBL:AL391712 HSSP:Q9C932 HOGENOM:HOG000237406 SUPFAM:SSF101941
ProtClustDB:CLSN2686235 EMBL:BT020263 EMBL:AK317217 IPI:IPI00527439
RefSeq:NP_001078551.1 RefSeq:NP_001078552.1 RefSeq:NP_001154700.1
RefSeq:NP_196495.1 UniGene:At.48014 UniGene:At.67761
ProteinModelPortal:Q9FY82 SMR:Q9FY82 IntAct:Q9FY82 STRING:Q9FY82
EnsemblPlants:AT5G09330.1 EnsemblPlants:AT5G09330.2
EnsemblPlants:AT5G09330.3 EnsemblPlants:AT5G09330.4 GeneID:830792
KEGG:ath:AT5G09330 TAIR:At5g09330 InParanoid:Q9FY82 OMA:QDLTAPL
PhylomeDB:Q9FY82 Genevestigator:Q9FY82 Uniprot:Q9FY82
Length = 489
Score = 169 (64.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 54/147 (36%), Positives = 72/147 (48%)
Query: 49 LPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVT- 107
L G +F PTD EL+ + ++ K + K L+D E I P LP ++
Sbjct: 6 LAPGFRFHPTDVELVRYY---LKRKILGKKL-LVDAI-----AEVDIYKFEPPDLPDMSF 56
Query: 108 -RDG-LSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCK 165
R G L HFF K Y +G R R TEC W TGK RPV+ N + G
Sbjct: 57 IRSGDLKWHFFCPREKKYASGVRANRA--TECGY------WKTTGKERPVLCNSEVVG-- 106
Query: 166 KILVLYTNFGKNRKPEKTNWVMHQYHL 192
KI L +FGK+ + E+T+WVMH+Y L
Sbjct: 107 KIKTLVYHFGKSPRGERTDWVMHEYRL 133
>TAIR|locus:2037920 [details] [associations]
symbol:NAC014 "NAC 014" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0000394
"RNA splicing, via endonucleolytic cleavage and ligation"
evidence=RCA] [GO:0009086 "methionine biosynthetic process"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0010050 "vegetative phase change" evidence=RCA]
InterPro:IPR003441 Pfam:PF02365 PROSITE:PS51005 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0003677 GO:GO:0003700
SUPFAM:SSF101941 EMBL:BT046189 IPI:IPI00548383 RefSeq:NP_973954.1
UniGene:At.40004 ProteinModelPortal:B5X570 SMR:B5X570 PaxDb:B5X570
PRIDE:B5X570 EnsemblPlants:AT1G33060.2 GeneID:840202
KEGG:ath:AT1G33060 TAIR:At1g33060 eggNOG:NOG313393
HOGENOM:HOG000074733 OMA:ARSRENQ PhylomeDB:B5X570
ProtClustDB:CLSN2680734 Genevestigator:B5X570 Uniprot:B5X570
Length = 652
Score = 168 (64.2 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 58/186 (31%), Positives = 83/186 (44%)
Query: 49 LPAGVKFDPTDQELIDH-LEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVT 107
LP G +F PTD+ELI+H L K+ +D+ IP I+ +C P LPG++
Sbjct: 24 LPLGFRFRPTDEELINHYLRLKINGRDLEV------RVIPEID----VCKWEPWDLPGLS 73
Query: 108 ---RDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGC 164
D FF + Y +G R R D+ G W TGK R + G
Sbjct: 74 VIKTDDQEWFFFCPRDRKYPSGHRSNRAT----DI--G--YWKATGKDRTIKSKKMIIGM 125
Query: 165 KKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGE----LVVSKIFYQTQ----PRQ 216
KK LV Y G+ + E+TNW+MH+Y E + G V+ ++F++ P
Sbjct: 126 KKTLVFYR--GRAPRGERTNWIMHEYRATDKELDGTGPGQNPYVLCRLFHKPSDSCDPAH 183
Query: 217 CNWSEK 222
C EK
Sbjct: 184 CEEIEK 189
>TAIR|locus:1009023241 [details] [associations]
symbol:AT3G12977 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006355 GO:GO:0003677 HSSP:Q9C932 HOGENOM:HOG000237406
SUPFAM:SSF101941 EMBL:AB026645 IPI:IPI00524144
RefSeq:NP_001030683.2 UniGene:At.49607 UniGene:At.64512
ProteinModelPortal:Q9LSI1 SMR:Q9LSI1 EnsemblPlants:AT3G12977.1
GeneID:3768816 KEGG:ath:AT3G12977 TAIR:At3g12977 eggNOG:NOG288550
OMA:HHIINQH PhylomeDB:Q9LSI1 ProtClustDB:CLSN2920117
Genevestigator:Q9LSI1 Uniprot:Q9LSI1
Length = 279
Score = 159 (61.0 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 52/169 (30%), Positives = 77/169 (45%)
Query: 49 LPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTR 108
LP G +F P D EL+ + + + +P LID + E P +P R
Sbjct: 18 LPPGFRFHPRDDELVCDYLMRRTVRSLYQPVVLIDVDLNKCE---------PWDIPQTAR 68
Query: 109 -DGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKI 167
G +F+ + + Y TG R R T G W TGK R + NG G +K
Sbjct: 69 VGGKEWYFYSQKDRKYATGYRTNRATAT------GY--WKATGKDRAIQRNGGLVGMRKT 120
Query: 168 LVLYTNFGKNRKPEKTNWVMHQYHL-GQ--HEEEK--EGELVVSKIFYQ 211
LV Y G++ K KT+WVMH++ L G+ H E E V+ ++F++
Sbjct: 121 LVFYR--GRSPKGRKTDWVMHEFRLQGKLLHHSPNSLEEEWVLCRVFHK 167
>TAIR|locus:2061082 [details] [associations]
symbol:NAC038 "NAC domain containing protein 38"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002685 GO:GO:0003677 GO:GO:0003700
HSSP:Q9C932 HOGENOM:HOG000237406 SUPFAM:SSF101941 EMBL:AC006403
IPI:IPI00541774 PIR:E84636 RefSeq:NP_180019.1 RefSeq:NP_850054.1
UniGene:At.39159 ProteinModelPortal:Q9ZQ25 SMR:Q9ZQ25
EnsemblPlants:AT2G24430.1 EnsemblPlants:AT2G24430.2 GeneID:816979
KEGG:ath:AT2G24430 TAIR:At2g24430 InParanoid:Q9ZQ25 OMA:YYLVNKI
PhylomeDB:Q9ZQ25 ProtClustDB:CLSN2683038 ArrayExpress:Q9ZQ25
Genevestigator:Q9ZQ25 Uniprot:Q9ZQ25
Length = 316
Score = 158 (60.7 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 57/195 (29%), Positives = 83/195 (42%)
Query: 37 GHKLEAKPDWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGIC 96
G + K + LP G +F PTD+ELI + A + D + + E
Sbjct: 4 GDHQQHKKEEEALPPGFRFHPTDEELISYYLVNKIADQNFTGKAIAD--VDLNKSEP--- 58
Query: 97 YTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVM 156
+ PEK G +FF + Y TG R R T G W TGK + +
Sbjct: 59 WELPEK---AKMGGKEWYFFSLRDRKYPTGVRTNRATNT------GY--WKTTGKDKEIF 107
Query: 157 --VNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHL---GQHEEEKEGELVVSKIFYQ 211
+ G KK LV Y G+ + EKT WVMH+Y L + K+ E VV ++F +
Sbjct: 108 NSTTSELVGMKKTLVFYR--GRAPRGEKTCWVMHEYRLHSKSSYRTSKQDEWVVCRVFKK 165
Query: 212 TQPRQCNWSEKSATT 226
T+ + S S++T
Sbjct: 166 TEATKKYISTSSSST 180
>TAIR|locus:2128013 [details] [associations]
symbol:NTL9 "NAC transcription factor-like 9"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005516 "calmodulin
binding" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0031347 "regulation
of defense response" evidence=IMP] [GO:0000956 "nuclear-transcribed
mRNA catabolic process" evidence=RCA] [GO:0006487 "protein N-linked
glycosylation" evidence=RCA] [GO:0008284 "positive regulation of
cell proliferation" evidence=RCA] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 GO:GO:0005634 GO:GO:0045892 EMBL:CP002687
GO:GO:0003677 GO:GO:0003700 GO:GO:0005516 EMBL:AL161587 HSSP:Q9C932
SUPFAM:SSF101941 EMBL:AL031135 GO:GO:0031347 HOGENOM:HOG000074733
IPI:IPI00892248 PIR:T04663 RefSeq:NP_001119122.1 UniGene:At.20744
ProteinModelPortal:O81790 SMR:O81790 PaxDb:O81790 PRIDE:O81790
EnsemblPlants:AT4G35580.2 GeneID:829710 KEGG:ath:AT4G35580
TAIR:At4g35580 eggNOG:NOG284414 InParanoid:O81790 OMA:HNTENNL
PhylomeDB:O81790 ProtClustDB:CLSN2681007 ArrayExpress:O81790
Genevestigator:O81790 Uniprot:O81790
Length = 534
Score = 158 (60.7 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 59/220 (26%), Positives = 91/220 (41%)
Query: 49 LPAGVKFDPTDQELIDH-LEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVT 107
LP G +F PTD+EL++H L K+ + H + IP I+ +C P LP ++
Sbjct: 9 LPLGFRFRPTDEELVNHYLRLKINGR-----HSDV-RVIPDID----VCKWEPWDLPALS 58
Query: 108 ---RDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGC 164
D FF + Y G R R + G W TGK R + G
Sbjct: 59 VIKTDDPEWFFFCPRDRKYPNGHRSNRATDS------G--YWKATGKDRSIKSKKTLIGM 110
Query: 165 KKILVLYTNFGKNRKPEKTNWVMHQYH--LGQHEEEKEGE--LVVSKIFYQTQPRQCNW- 219
KK LV Y G+ K E+TNW+MH+Y L + G+ V+ ++F++ R
Sbjct: 111 KKTLVFYR--GRAPKGERTNWIMHEYRPTLKDLDGTSPGQSPYVLCRLFHKPDDRVNGVK 168
Query: 220 SEKSATTGEGSSDPNXXXXXXXXXXXXKEMIPHRDHEVSG 259
S+++A T P+ + + + SG
Sbjct: 169 SDEAAFTASNKYSPDDTSSDLVQETPSSDAAVEKPSDYSG 208
>TAIR|locus:2019833 [details] [associations]
symbol:SMB "SOMBRERO" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0007275 "multicellular organismal
development" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010455
"positive regulation of cell fate commitment" evidence=IMP]
[GO:0048829 "root cap development" evidence=IMP] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0009834 "secondary cell wall biogenesis" evidence=IMP]
[GO:0003002 "regionalization" evidence=IMP] InterPro:IPR003441
Pfam:PF02365 PROSITE:PS51005 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0048829 HSSP:Q9C932 HOGENOM:HOG000237406
GO:GO:0009834 SUPFAM:SSF101941 EMBL:AC010793 eggNOG:NOG246062
GO:GO:0010455 EMBL:BX816756 IPI:IPI00521162 RefSeq:NP_178076.1
RefSeq:NP_974178.1 RefSeq:NP_974179.1 UniGene:At.50052
ProteinModelPortal:Q9MA17 SMR:Q9MA17 PaxDb:Q9MA17 PRIDE:Q9MA17
EnsemblPlants:AT1G79580.1 EnsemblPlants:AT1G79580.2
EnsemblPlants:AT1G79580.3 GeneID:844296 KEGG:ath:AT1G79580
TAIR:At1g79580 InParanoid:Q9MA17 OMA:HEFANTL PhylomeDB:Q9MA17
ProtClustDB:CLSN2717431 Genevestigator:Q9MA17 GO:GO:0003002
Uniprot:Q9MA17
Length = 371
Score = 154 (59.3 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 54/169 (31%), Positives = 77/169 (45%)
Query: 47 LGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGV 106
L +P G +F PT++EL+ + K V P ID + I D + P +L
Sbjct: 15 LSVPPGFRFHPTEEELLYYY-----LKKKVSYEP-ID--LDVIREVD-LNKLEPWELKEK 65
Query: 107 TRDGLSR----HFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQK 162
R G +FF K Y TGTR R T W TG+ + + +N +K
Sbjct: 66 CRIGSGPQNEWYFFSHKDKKYPTGTRTNRA--TAAGF------WKATGRDKSIHLNSSKK 117
Query: 163 -GCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEE-KEGELVVSKIF 209
G +K LV YT G+ +KT W+MH+Y L E E +E VV ++F
Sbjct: 118 IGLRKTLVFYT--GRAPHGQKTEWIMHEYRLDDSENEIQEDGWVVCRVF 164
>TAIR|locus:2154684 [details] [associations]
symbol:CUC2 "CUP-SHAPED COTYLEDON 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=ISS] [GO:0010072
"primary shoot apical meristem specification" evidence=IGI]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0048366 "leaf development"
evidence=IMP] [GO:0048504 "regulation of timing of organ formation"
evidence=IMP] [GO:0010223 "secondary shoot formation" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010160
"formation of organ boundary" evidence=IGI] InterPro:IPR003441
Pfam:PF02365 PROSITE:PS51005 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0010072 GO:GO:0048366 EMBL:AB007644 GO:GO:0010223 HSSP:Q9C932
HOGENOM:HOG000237406 SUPFAM:SSF101941 GO:GO:0010160 EMBL:AB002560
EMBL:BT030026 IPI:IPI00544805 RefSeq:NP_200206.1 UniGene:At.55538
ProteinModelPortal:O04017 SMR:O04017 IntAct:O04017 STRING:O04017
PRIDE:O04017 EnsemblPlants:AT5G53950.1 GeneID:835478
KEGG:ath:AT5G53950 TAIR:At5g53950 eggNOG:NOG316967
InParanoid:O04017 OMA:ASAITEH PhylomeDB:O04017
ProtClustDB:CLSN2718935 ArrayExpress:O04017 Genevestigator:O04017
GO:GO:0048504 Uniprot:O04017
Length = 375
Score = 154 (59.3 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 55/173 (31%), Positives = 76/173 (43%)
Query: 49 LPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTR 108
LP G +F PTD+ELI H + + + + E P +LPG +
Sbjct: 17 LPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCE---------PWQLPGRAK 67
Query: 109 DGLSR-HFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQK--GCK 165
G +FF + Y TG R R TE W TGK R + + G K
Sbjct: 68 MGEKEWYFFSLRDRKYPTGLRTNRA--TEAGY------WKATGKDREIFSSKTCALVGMK 119
Query: 166 KILVLYTNFGKNRKPEKTNWVMHQYHL-GQ---H--EEEKEGELVVSKIFYQT 212
K LV Y G+ K EK+NWVMH+Y L G+ H + E V+S++F +T
Sbjct: 120 KTLVFYK--GRAPKGEKSNWVMHEYRLEGKFSYHFISRSSKDEWVISRVFQKT 170
>TAIR|locus:2124014 [details] [associations]
symbol:RD26 "RESPONSIVE TO DESICCATION 26" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0009414 "response to water deprivation"
evidence=RCA;IMP] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0007165 "signal
transduction" evidence=RCA] [GO:0009409 "response to cold"
evidence=RCA] [GO:0009611 "response to wounding" evidence=RCA]
[GO:0009723 "response to ethylene stimulus" evidence=RCA]
[GO:0009733 "response to auxin stimulus" evidence=RCA] [GO:0009738
"abscisic acid mediated signaling pathway" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=RCA]
InterPro:IPR003441 Pfam:PF02365 PROSITE:PS51005 GO:GO:0009737
GO:GO:0005634 GO:GO:0045893 EMBL:CP002687 GO:GO:0003677
GO:GO:0009414 GO:GO:0003700 SUPFAM:SSF101941 IPI:IPI00540040
RefSeq:NP_001078452.1 UniGene:At.20412 ProteinModelPortal:F4JIU9
SMR:F4JIU9 EnsemblPlants:AT4G27410.3 GeneID:828849
KEGG:ath:AT4G27410 OMA:KIITADG ArrayExpress:F4JIU9 Uniprot:F4JIU9
Length = 314
Score = 152 (58.6 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 55/183 (30%), Positives = 80/183 (43%)
Query: 47 LGLPAGVKFDPTDQEL-IDHLEAKVEAKDM-VKPHPLID--EFIPTIEGEDGICYTHPEK 102
L LP G +F PTD+EL + +L KV ++ ID +F P C+T +
Sbjct: 12 LSLPPGFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLYKFDPWDLPSKQTCFTFVGE 71
Query: 103 LP----GVTRDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMV 157
G G +F P + Y G+R R G W TG + +
Sbjct: 72 YNCNYLGKALFGEKEWYFFSPRDRKYPNGSRPNRV--------AGSGYWKATGTDKIITA 123
Query: 158 NGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEE----KEGELVVSKIFYQTQ 213
+G++ G KK LV Y GK K KTNW+MH+Y L +H K + V+ +I+ +T
Sbjct: 124 DGRRVGIKKALVFYA--GKAPKGTKTNWIMHEYRLIEHSRSHGSSKLDDWVLCRIYKKTS 181
Query: 214 PRQ 216
Q
Sbjct: 182 GSQ 184
>TAIR|locus:2009729 [details] [associations]
symbol:NAC028 "NAC domain containing protein 28"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0003677 EMBL:AC009513 GO:GO:0003700 HSSP:Q9C932
SUPFAM:SSF101941 HOGENOM:HOG000239673 IPI:IPI00525652 PIR:D96683
RefSeq:NP_176766.1 UniGene:At.50005 ProteinModelPortal:Q9SRZ8
SMR:Q9SRZ8 EnsemblPlants:AT1G65910.1 GeneID:842903
KEGG:ath:AT1G65910 TAIR:At1g65910 eggNOG:NOG244810
InParanoid:Q9SRZ8 OMA:DERECEI PhylomeDB:Q9SRZ8
ProtClustDB:CLSN2679676 Genevestigator:Q9SRZ8 Uniprot:Q9SRZ8
Length = 631
Score = 150 (57.9 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 50/160 (31%), Positives = 73/160 (45%)
Query: 47 LGLPAGVKFDPTDQEL-IDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPG 105
+ +P G +F PTD+EL I +L+ K+ + + E IP I+ + P LPG
Sbjct: 4 VSMPPGFRFHPTDEELVIYYLKRKINGRTIEL------EIIPEID----LYKCEPWDLPG 53
Query: 106 ---VTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQK 162
+ L FF + Y G+R R + G W TGK R V + +
Sbjct: 54 KSLLPSKDLEWFFFSPRDRKYPNGSRTNRATKA------GY--WKATGKDRKVTSHSRMV 105
Query: 163 GCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHE-EEKEG 201
G KK LV Y G+ +T+WVMH+Y L + E + K G
Sbjct: 106 GTKKTLVYYR--GRAPHGSRTDWVMHEYRLEEQECDSKSG 143
Score = 50 (22.7 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 18/68 (26%), Positives = 29/68 (42%)
Query: 252 HRDHEVSGAQVAAAMSSYGAIDMQQLKSDHFSFVPFR--KSFDEVGIGEASTARE-APAH 308
H D SG +V+ ++ A+DMQ+ H +F R ++ VG+ + H
Sbjct: 330 HGDFNYSGEKVSCLEANVEAVDMQE---HHVNFKEERLVENLRWVGVSSKELEKSFVEEH 386
Query: 309 GTCEDIRD 316
T I D
Sbjct: 387 STVIPIED 394
>TAIR|locus:2090186 [details] [associations]
symbol:NAC2 "NAC domain containing protein 2"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;NAS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=ISS] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003677 GO:GO:0003700 HSSP:Q9C932 HOGENOM:HOG000237406
SUPFAM:SSF101941 EMBL:AB022218 EMBL:AC024081 EMBL:BT004079
EMBL:BT005044 EMBL:AB049071 IPI:IPI00526362 RefSeq:NP_188170.1
UniGene:At.10489 ProteinModelPortal:Q9LD44 SMR:Q9LD44 STRING:Q9LD44
EnsemblPlants:AT3G15510.1 GeneID:820790 KEGG:ath:AT3G15510
TAIR:At3g15510 eggNOG:NOG259381 InParanoid:Q9LD44 OMA:MINNIGT
PhylomeDB:Q9LD44 ProtClustDB:CLSN2915668 ArrayExpress:Q9LD44
Genevestigator:Q9LD44 Uniprot:Q9LD44
Length = 364
Score = 152 (58.6 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 50/152 (32%), Positives = 69/152 (45%)
Query: 44 PDWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKL 103
P LP G +F PTD+EL+ H ++ K P P+ I E + P +L
Sbjct: 12 PPQPNLPPGFRFHPTDEELVVHY---LKRKAASAPLPV------AIIAEVDLYKFDPWEL 62
Query: 104 PGVTRDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVN-GKQ 161
P G +F P + Y G R R + G W TG +PV+ + G Q
Sbjct: 63 PAKASFGEQEWYFFSPRDRKYPNGARPNRAATS------GY--WKATGTDKPVLASDGNQ 114
Query: 162 K-GCKKILVLYTNFGKNRKPEKTNWVMHQYHL 192
K G KK LV Y+ GK K K++W+MH+Y L
Sbjct: 115 KVGVKKALVFYS--GKPPKGVKSDWIMHEYRL 144
>TAIR|locus:2020123 [details] [associations]
symbol:NAC020 "NAC domain containing protein 20"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0003677 GO:GO:0003700 HOGENOM:HOG000237406 SUPFAM:SSF101941
EMBL:AK176278 IPI:IPI00520025 RefSeq:NP_175835.2 UniGene:At.37235
ProteinModelPortal:Q67Z40 SMR:Q67Z40 IntAct:Q67Z40
EnsemblPlants:AT1G54330.1 GeneID:841874 KEGG:ath:AT1G54330
TAIR:At1g54330 eggNOG:NOG303611 InParanoid:Q67Z40 OMA:DENFNND
PhylomeDB:Q67Z40 ProtClustDB:CLSN2681532 ArrayExpress:Q67Z40
Genevestigator:Q67Z40 Uniprot:Q67Z40
Length = 301
Score = 148 (57.2 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 49/149 (32%), Positives = 70/149 (46%)
Query: 47 LGLPAGVKFDPTDQELIDH-LEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEK--L 103
+ LP G +F PTD+EL+ + L+ KV + + E IP ++ + PEK L
Sbjct: 4 MSLPPGFRFHPTDEELVAYYLDRKVNGQAIEL------EIIPEVDLYKCEPWDLPEKSFL 57
Query: 104 PGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKG 163
PG + + +F+ K Y G+R R + G W TGK R V + G
Sbjct: 58 PG---NDMEWYFYSTRDKKYPNGSRTNRATRA------G--YWKATGKDRTVESKKMKMG 106
Query: 164 CKKILVLYTNFGKNRKPEKTNWVMHQYHL 192
KK LV Y G+ +TNWVMH+Y L
Sbjct: 107 MKKTLVYYR--GRAPHGLRTNWVMHEYRL 133
>TAIR|locus:2026232 [details] [associations]
symbol:ANAC026 "Arabidopsis NAC domain containing protein
26" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002684 GO:GO:0003677 GO:GO:0003700
SUPFAM:SSF101941 IPI:IPI00520504 RefSeq:NP_176457.1
UniGene:At.52328 ProteinModelPortal:F4HYV5 SMR:F4HYV5
EnsemblPlants:AT1G62700.1 GeneID:842568 KEGG:ath:AT1G62700
OMA:NEEQSEW Uniprot:F4HYV5
Length = 394
Score = 150 (57.9 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 48/165 (29%), Positives = 78/165 (47%)
Query: 49 LPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTR 108
+P G +F PTD+EL+D+ K A ++ + D + IE D ++L +
Sbjct: 7 VPPGFRFHPTDEELVDYYLRKKVASKRIEIDIIKDVDLYKIEPCD------LQELCKIGN 60
Query: 109 DGLSR-HFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKI 167
+ S +FF K Y TGTR R T+ W TG+ + + + G +K
Sbjct: 61 EEQSEWYFFSHKDKKYPTGTRTNRA--TKAGF------WKATGRDKAIYIRHSLIGMRKT 112
Query: 168 LVLYTNFGKNRKPEKTNWVMHQYHLGQHEE---EKEGELVVSKIF 209
LV Y G+ +K++W+MH+Y L E ++EG VV ++F
Sbjct: 113 LVFYK--GRAPNGQKSDWIMHEYRLETSENGTPQEEG-WVVCRVF 154
>TAIR|locus:2089764 [details] [associations]
symbol:NAC057 "NAC domain containing protein 57"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003677 GO:GO:0003700 HSSP:Q9C932 HOGENOM:HOG000237406
SUPFAM:SSF101941 EMBL:AB026646 EMBL:DQ056595 IPI:IPI00538373
RefSeq:NP_188400.1 UniGene:At.53361 ProteinModelPortal:Q9LSH5
SMR:Q9LSH5 EnsemblPlants:AT3G17730.1 GeneID:821041
KEGG:ath:AT3G17730 TAIR:At3g17730 eggNOG:NOG305986
InParanoid:Q9LSH5 OMA:FITDDAW PhylomeDB:Q9LSH5
ProtClustDB:CLSN2684334 Genevestigator:Q9LSH5 Uniprot:Q9LSH5
Length = 246
Score = 144 (55.7 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 57/191 (29%), Positives = 89/191 (46%)
Query: 47 LGLPAGVKFDPTDQELIDH-LEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEK--L 103
+GLP G +F PTD+EL+++ L+ K+ +++ +D IP ++ + EK L
Sbjct: 4 VGLPPGFRFHPTDEELVNYYLKRKINGQEIE-----LD-IIPEVDLYKCEPWDLAEKSFL 57
Query: 104 PGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKG 163
P +RD +FF + Y G R R + GG W TGK R V + G
Sbjct: 58 P--SRDP-EWYFFGPRDRKYPNGFRTNRATR------GGY--WKSTGKDRRVTSQSRAIG 106
Query: 164 CKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQ--CNW-- 219
KK LV Y G+ + +T+WVMH+Y L + + L S + + C+
Sbjct: 107 MKKTLVYYK--GRAPQGIRTDWVMHEYRLDDKDCDDPSSLQDSYALCRVFKKNGICSELE 164
Query: 220 SEKSATTGEGS 230
SE+ TG+ S
Sbjct: 165 SERQLQTGQCS 175
>TAIR|locus:2100845 [details] [associations]
symbol:NAC048 "NAC domain containing protein 48"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003677 GO:GO:0003700 HSSP:Q9C932 HOGENOM:HOG000237406
SUPFAM:SSF101941 ProtClustDB:CLSN2679315 EMBL:AY060587
EMBL:BT000846 IPI:IPI00525231 RefSeq:NP_566226.1 UniGene:At.27362
ProteinModelPortal:Q8W4R4 SMR:Q8W4R4 EnsemblPlants:AT3G04420.1
GeneID:819597 KEGG:ath:AT3G04420 TAIR:At3g04420 OMA:IENSSTC
PhylomeDB:Q8W4R4 ArrayExpress:Q8W4R4 Genevestigator:Q8W4R4
Uniprot:Q8W4R4
Length = 342
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 53/182 (29%), Positives = 86/182 (47%)
Query: 50 PAGVKFDPTDQELI-DHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTR 108
P G++F PTD+E++ D+L K +D H +D I T+ I P +LP +R
Sbjct: 4 PVGLRFRPTDKEIVVDYLRPKNSDRDT--SH--VDRVISTVT----IRSFDPWELPCQSR 55
Query: 109 DGLSRH---FFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCK 165
L FF Y G ++ RK ++ G W TGK +P++ N ++ G K
Sbjct: 56 IKLKDESWCFFSPKENKYGRGDQQIRKTKS------GY--WKITGKPKPILRNRQEIGEK 107
Query: 166 KILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSEKSAT 225
K+L+ Y + K K++WVMH+YH + + K+ ++ R+ S SA+
Sbjct: 108 KVLMFYMS--KELGGSKSDWVMHEYHAFSPTQMMM-TYTICKVMFKGDVREI--SSSSAS 162
Query: 226 TG 227
G
Sbjct: 163 YG 164
>TAIR|locus:2202028 [details] [associations]
symbol:NAC007 "NAC 007" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0042546 "cell wall biogenesis" evidence=RCA]
[GO:0044036 "cell wall macromolecule metabolic process"
evidence=RCA] InterPro:IPR003441 Pfam:PF02365 PROSITE:PS51005
GO:GO:0007275 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 HSSP:Q9C932
HOGENOM:HOG000237406 SUPFAM:SSF101941 EMBL:AC022522 EMBL:BT029761
IPI:IPI00534068 PIR:G86257 RefSeq:NP_172690.1 UniGene:At.43180
ProteinModelPortal:Q9FWX2 SMR:Q9FWX2 IntAct:Q9FWX2
EnsemblPlants:AT1G12260.1 GeneID:837780 KEGG:ath:AT1G12260
TAIR:At1g12260 eggNOG:NOG316864 InParanoid:A1L4X4 OMA:ASASIQN
PhylomeDB:Q9FWX2 ProtClustDB:CLSN2682241 Genevestigator:Q9FWX2
Uniprot:Q9FWX2
Length = 395
Score = 148 (57.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 52/169 (30%), Positives = 80/169 (47%)
Query: 49 LPAGVKFDPTDQELIDH-LEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVT 107
+P G +F PTD+EL+D+ L KV +K + ID FI I+ + P L +
Sbjct: 7 VPPGFRFHPTDEELVDYYLRKKVASKRIE-----ID-FIKDID----LYKIEPWDLQELC 56
Query: 108 RDGLSR----HFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKG 163
+ G +FF K Y TGTR R T+ W TG+ + + + G
Sbjct: 57 KIGHEEQSDWYFFSHKDKKYPTGTRTNRA--TKAGF------WKATGRDKAIYLRHSLIG 108
Query: 164 CKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEE---EKEGELVVSKIF 209
+K LV Y G+ +K++W+MH+Y L E ++EG VV ++F
Sbjct: 109 MRKTLVFYK--GRAPNGQKSDWIMHEYRLETDENGTPQEEG-WVVCRVF 154
>TAIR|locus:2075815 [details] [associations]
symbol:NAC053 "AT3G10500" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0009819
"drought recovery" evidence=IMP] [GO:0010150 "leaf senescence"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:2000377 "regulation of reactive
oxygen species metabolic process" evidence=IMP] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 GO:GO:0005634 GO:GO:0005737 EMBL:CP002686
GO:GO:0045893 GO:GO:0003677 GO:GO:0003700 GO:GO:0010150
GO:GO:2000377 HSSP:Q9C932 SUPFAM:SSF101941 ProtClustDB:CLSN2686265
GO:GO:0009819 EMBL:AY051003 EMBL:AY079345 IPI:IPI00520345
RefSeq:NP_566376.1 UniGene:At.21933 ProteinModelPortal:Q949N0
SMR:Q949N0 STRING:Q949N0 DNASU:820214 EnsemblPlants:AT3G10500.1
GeneID:820214 KEGG:ath:AT3G10500 TAIR:At3g10500 InParanoid:Q949N0
OMA:GMITISD PhylomeDB:Q949N0 ArrayExpress:Q949N0
Genevestigator:Q949N0 Uniprot:Q949N0
Length = 549
Score = 150 (57.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 51/168 (30%), Positives = 78/168 (46%)
Query: 49 LPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTR 108
L G +F PTD+EL+ + ++ K KP + I + + P+K +R
Sbjct: 9 LAPGFRFHPTDEELVRYY---LKRKICNKPFKF--DAISVTDVYKSEPWDLPDKSRLKSR 63
Query: 109 DGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKIL 168
D L +FF K Y G++ R TE W TGK R ++ K G KK L
Sbjct: 64 D-LEWYFFSMLDKKYRNGSKTNRA--TEMGY------WKTTGKDREILNGSKVVGMKKTL 114
Query: 169 VLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEG----ELVVSKIFYQT 212
V + G+ + E+TNWVMH+Y L + +K G V+ +IF ++
Sbjct: 115 VYHK--GRAPRGERTNWVMHEYRLVDQDLDKTGVHQDAFVLCRIFQKS 160
>TAIR|locus:2089205 [details] [associations]
symbol:AT3G12910 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR003441 Pfam:PF02365 PROSITE:PS51005 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 HSSP:Q9C932
HOGENOM:HOG000237406 SUPFAM:SSF101941 EMBL:AB026645 EMBL:AP000385
IPI:IPI00524434 RefSeq:NP_187897.2 UniGene:At.39525
ProteinModelPortal:Q9LSI4 SMR:Q9LSI4 EnsemblPlants:AT3G12910.1
GeneID:820475 KEGG:ath:AT3G12910 TAIR:At3g12910 eggNOG:NOG268950
OMA:DNTRESE PhylomeDB:Q9LSI4 ProtClustDB:CLSN2920264
Genevestigator:Q9LSI4 Uniprot:Q9LSI4
Length = 303
Score = 145 (56.1 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 49/151 (32%), Positives = 67/151 (44%)
Query: 45 DWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLP 104
D L LP G +F PTD+EL+ + +K K ++K IDE + I+ I P LP
Sbjct: 18 DALKLP-GFRFHPTDEELVGYYLSK---KVLLKKTSKIDEIVSQID----IYKFDPWDLP 69
Query: 105 GVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQK-- 162
+FF + + Y R R G W TG +PV +G K
Sbjct: 70 RSRNTEKESYFFCKRGRKYRNSIRPNRVT--------GSGFWKATGIDKPVYSDGSNKAV 121
Query: 163 -GCKKILVLYTNFGKNRKPEKTNWVMHQYHL 192
G KK LV Y G K KT+W+MH++ L
Sbjct: 122 IGLKKTLVYY--LGSAGKGNKTDWMMHEFRL 150
>TAIR|locus:2012035 [details] [associations]
symbol:NAC1 "NAC domain containing protein 1"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009734 "auxin mediated signaling
pathway" evidence=TAS] [GO:0010072 "primary shoot apical meristem
specification" evidence=TAS] [GO:0048527 "lateral root development"
evidence=TAS] InterPro:IPR003441 Pfam:PF02365 PROSITE:PS51005
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048527
GO:GO:0010072 HOGENOM:HOG000237406 SUPFAM:SSF101941 EMBL:AC002304
EMBL:AF198054 EMBL:AC009894 EMBL:BT005873 EMBL:AK228347
EMBL:AY085996 IPI:IPI00534021 IPI:IPI00545627 PIR:C96601
RefSeq:NP_175997.1 RefSeq:NP_849817.1 UniGene:At.48312
UniGene:At.71152 ProteinModelPortal:Q84TE6 SMR:Q84TE6 STRING:Q84TE6
EnsemblPlants:AT1G56010.2 GeneID:842052 KEGG:ath:AT1G56010
GeneFarm:4063 TAIR:At1g56010 eggNOG:NOG251274 InParanoid:Q84TE6
OMA:ESGFTQM PhylomeDB:Q84TE6 ProtClustDB:CLSN2682686
Genevestigator:Q84TE6 GermOnline:AT1G56010 Uniprot:Q84TE6
Length = 324
Score = 144 (55.7 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 48/150 (32%), Positives = 71/150 (47%)
Query: 49 LPAGVKFDPTDQELI-DHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVT 107
LP G +F P D EL+ D+L + + +P PL+ I+ + C P +P +
Sbjct: 19 LPPGFRFHPKDDELVCDYLMRR-SLHNNHRP-PLV-----LIQVDLNKC--EPWDIPKMA 69
Query: 108 R-DGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKK 166
G +F+ + + Y TG R R T G W TGK R ++ GK G +K
Sbjct: 70 CVGGKDWYFYSQRDRKYATGLRTNRATAT------GY--WKATGKDRTILRKGKLVGMRK 121
Query: 167 ILVLYTNFGKNRKPEKTNWVMHQYHL-GQH 195
LV Y G+ + KT+WVMH++ L G H
Sbjct: 122 TLVFYQ--GRAPRGRKTDWVMHEFRLQGSH 149
>TAIR|locus:2153899 [details] [associations]
symbol:TIP "TCV-interacting protein" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=ISS] [GO:0003713
"transcription coactivator activity" evidence=IDA] [GO:0051607
"defense response to virus" evidence=IPI] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009414 "response to water deprivation" evidence=RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=RCA]
InterPro:IPR003441 Pfam:PF02365 PROSITE:PS51005 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0051607 GO:GO:0003713 EMBL:AB010068 HSSP:Q9C932
SUPFAM:SSF101941 HOGENOM:HOG000074733 EMBL:AF281062 EMBL:BT002012
EMBL:BT009683 IPI:IPI00526531 RefSeq:NP_197847.3 UniGene:At.65025
ProteinModelPortal:Q9LKG8 SMR:Q9LKG8 STRING:Q9LKG8
EnsemblPlants:AT5G24590.2 GeneID:832530 KEGG:ath:AT5G24590
TAIR:At5g24590 eggNOG:NOG316053 OMA:EVEMSEV PhylomeDB:Q9LKG8
ProtClustDB:CLSN2684244 ArrayExpress:Q9LKG8 Genevestigator:Q9LKG8
Uniprot:Q9LKG8
Length = 451
Score = 146 (56.5 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 56/171 (32%), Positives = 79/171 (46%)
Query: 49 LPAGVKFDPTDQELIDH-LEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLP--G 105
LP G +F PTD+EL+ + L K+ H D + I D IC P LP
Sbjct: 13 LPVGFRFSPTDEELVRYYLRLKING------H---DNDVRVIREID-ICKWEPWDLPDFS 62
Query: 106 VTRDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQK-- 162
V + S F P + Y +G+R R + G W TGK R + +GK K
Sbjct: 63 VVKTTDSEWLFFCPLDRKYPSGSRMNR-----ATVAG---YWKATGKDRKIK-SGKTKII 113
Query: 163 GCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEE--KEGE--LVVSKIF 209
G K+ LV YT G+ K +T W+MH+Y + + + K G+ VV K+F
Sbjct: 114 GVKRTLVFYT--GRAPKGTRTCWIMHEYRATEKDLDGTKSGQNPFVVCKLF 162
>TAIR|locus:2121323 [details] [associations]
symbol:NAC074 "NAC domain containing protein 74"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 HSSP:Q9C932 SUPFAM:SSF101941
EMBL:BT002462 EMBL:BT008741 IPI:IPI00518563 RefSeq:NP_567811.1
UniGene:At.32009 ProteinModelPortal:Q8GUJ6 SMR:Q8GUJ6 PRIDE:Q8GUJ6
EnsemblPlants:AT4G28530.1 GeneID:828971 KEGG:ath:AT4G28530
TAIR:At4g28530 HOGENOM:HOG000114725 InParanoid:Q8GUJ6 OMA:HICEPWE
PhylomeDB:Q8GUJ6 ProtClustDB:CLSN2689660 Genevestigator:Q8GUJ6
Uniprot:Q8GUJ6
Length = 352
Score = 144 (55.7 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 54/175 (30%), Positives = 82/175 (46%)
Query: 49 LPAGVKFDPTDQELIDH-LEAKVEAK----DMVKPHPLIDEFIP----TIEGEDGICYTH 99
LP G +F P+D+EL+ H L K+ AK D+ +DE + +E + IC
Sbjct: 10 LPPGFRFHPSDEELVCHYLCNKIRAKSDHGDVDDDDDDVDEALKGSTDLVEIDLHIC--E 67
Query: 100 PEKLPGVTR-DGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVN 158
P +LP V + + +FF + Y TG R R + G W TGK R VM
Sbjct: 68 PWELPDVAKLNAKEWYFFSFRDRKYATGYRTNR-----ATVSG---YWKATGKDRTVMDP 119
Query: 159 GKQK--GCKKILVLYTNFGKNRKPE--KTNWVMHQYHLGQHEEEKEGELVVSKIF 209
++ G +K LV Y +NR P KT W+MH++ L + + V+ ++F
Sbjct: 120 RTRQLVGMRKTLVFY----RNRAPNGIKTTWIMHEFRLECPNIPPKEDWVLCRVF 170
>TAIR|locus:2011516 [details] [associations]
symbol:NAM "NO APICAL MERISTEM" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
InterPro:IPR003441 Pfam:PF02365 PROSITE:PS51005 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC019018 HOGENOM:HOG000237406 SUPFAM:SSF101941
EMBL:AF123310 EMBL:AF123311 EMBL:AY099786 EMBL:BT000292
EMBL:AY086093 IPI:IPI00546186 PIR:A96570 RefSeq:NP_175696.1
UniGene:At.11024 ProteinModelPortal:Q9ZNU2 SMR:Q9ZNU2 STRING:Q9ZNU2
EnsemblPlants:AT1G52880.1 GeneID:841721 KEGG:ath:AT1G52880
GeneFarm:4062 TAIR:At1g52880 eggNOG:NOG242535 InParanoid:Q9ZNU2
OMA:KPTHICD PhylomeDB:Q9ZNU2 ProtClustDB:CLSN2913541
Genevestigator:Q9ZNU2 GermOnline:AT1G52880 Uniprot:Q9ZNU2
Length = 320
Score = 143 (55.4 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 51/154 (33%), Positives = 70/154 (45%)
Query: 44 PDWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKL 103
P LP G +F PTD+EL+ H K +A D V PL I ++ + P +L
Sbjct: 12 PPQPNLPPGFRFHPTDEELVIHY-LKRKA-DSV---PLPVAIIADVD----LYKFDPWEL 62
Query: 104 PGVTRDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNG--- 159
P G +F P + Y G R R + G W TG +PV+ G
Sbjct: 63 PAKASFGEQEWYFFSPRDRKYPNGARPNRAATS------GY--WKATGTDKPVISTGGGG 114
Query: 160 -KQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHL 192
K+ G KK LV Y+ GK K K++W+MH+Y L
Sbjct: 115 SKKVGVKKALVFYS--GKPPKGVKSDWIMHEYRL 146
>TAIR|locus:2142285 [details] [associations]
symbol:NAC096 "NAC domain containing protein 96"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 EMBL:AB028605 HSSP:Q9C932
HOGENOM:HOG000237406 SUPFAM:SSF101941 eggNOG:NOG246406
ProtClustDB:CLSN2686026 EMBL:BT020305 EMBL:BT020555 EMBL:AB493778
IPI:IPI00524352 RefSeq:NP_199471.1 UniGene:At.51256
ProteinModelPortal:Q9LS24 SMR:Q9LS24 IntAct:Q9LS24
EnsemblPlants:AT5G46590.1 GeneID:834702 KEGG:ath:AT5G46590
TAIR:At5g46590 InParanoid:Q9LS24 OMA:DSSNIWI PhylomeDB:Q9LS24
Genevestigator:Q9LS24 Uniprot:Q9LS24
Length = 292
Score = 140 (54.3 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 57/195 (29%), Positives = 86/195 (44%)
Query: 49 LPAGVKFDPTDQELIDH-LEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEK--LPG 105
LP G +F PTD+ELI++ L+ KVE ++ E IP I+ + P+K LP
Sbjct: 6 LPPGFRFHPTDEELIEYYLKRKVEGLEIEL------EVIPVIDLYSFDPWELPDKSFLPN 59
Query: 106 VTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQK-GC 164
RD + +FF K Y G R R + G W TGK R + G
Sbjct: 60 --RD-MEWYFFCSRDKKYPNGFRTNR------GTKAGY--WKATGKDRKITSRSSSIIGY 108
Query: 165 KKILVLYTNFGKNRKPEKTNWVMHQYHL-----GQHEEEKEGELVVSKIFYQTQPRQCNW 219
+K LV Y G+ +++NW+MH+Y L Q + +G V+ ++ + + +
Sbjct: 109 RKTLVFYK--GRAPLGDRSNWIMHEYRLCDDDTSQGSQNLKGAFVLCRVAMKNEIKTNTK 166
Query: 220 SEK---SATTGEGSS 231
K T G G S
Sbjct: 167 IRKIPSEQTIGSGES 181
>TAIR|locus:2167155 [details] [associations]
symbol:NAC086 "NAC domain containing protein 86"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 EMBL:AB005238 HSSP:Q9C932
SUPFAM:SSF101941 HOGENOM:HOG000239673 ProtClustDB:CLSN2686325
IPI:IPI00534762 RefSeq:NP_197228.1 UniGene:At.50709
ProteinModelPortal:Q9FFI5 SMR:Q9FFI5 EnsemblPlants:AT5G17260.1
GeneID:831591 KEGG:ath:AT5G17260 TAIR:At5g17260 eggNOG:NOG317838
InParanoid:Q9FFI5 OMA:GNEERTM PhylomeDB:Q9FFI5
Genevestigator:Q9FFI5 Uniprot:Q9FFI5
Length = 476
Score = 144 (55.7 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 51/158 (32%), Positives = 73/158 (46%)
Query: 47 LGLPAGVKFDPTDQELIDH-LEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPG 105
+ LP G +F PTD+ELI + L+ K+ +++ E IP ++ + P LPG
Sbjct: 4 VSLPPGFRFHPTDEELITYYLKRKINGQEIEL------EIIPEVD----LYKCEPWDLPG 53
Query: 106 VT----RDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGK 160
+ +D FF P + Y G+R R + GG W TGK R V +
Sbjct: 54 KSLIPSKD--QEWFFFSPRDRKYPNGSRTNRATK------GGY--WKATGKDRRVSWRDR 103
Query: 161 QKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEE 198
G KK LV Y G+ +T WVMH+Y L + E E
Sbjct: 104 AIGTKKTLVYYR--GRAPHGIRTGWVMHEYRLDESECE 139
>TAIR|locus:2184342 [details] [associations]
symbol:NAC2 "NAC domain containing protein 2"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0009644 "response to high light intensity" evidence=IEP]
[GO:0009962 "regulation of flavonoid biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009644 SUPFAM:SSF101941 EMBL:AL162875
EMBL:AF201456 EMBL:AY099609 EMBL:AY128859 EMBL:AY140474
EMBL:AY140475 EMBL:AY140476 EMBL:AY140477 EMBL:AY140478
EMBL:AY140479 EMBL:AY140480 EMBL:AY140481 EMBL:AY140482
IPI:IPI00540036 PIR:T48437 RefSeq:NP_196061.1 UniGene:At.22852
UniGene:At.70111 ProteinModelPortal:Q84K00 SMR:Q84K00 STRING:Q84K00
PRIDE:Q84K00 EnsemblPlants:AT5G04410.1 GeneID:830320
KEGG:ath:AT5G04410 GeneFarm:4064 TAIR:At5g04410 eggNOG:NOG307717
HOGENOM:HOG000239623 InParanoid:Q84K00 OMA:TDIYKSE PhylomeDB:Q84K00
ProtClustDB:CLSN2686265 Genevestigator:Q84K00 GermOnline:AT5G04410
GO:GO:0009962 Uniprot:Q84K00
Length = 567
Score = 148 (57.2 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 48/153 (31%), Positives = 73/153 (47%)
Query: 49 LPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTR 108
L G +F PTD+EL+ + ++ K KP + I + + P+K +R
Sbjct: 9 LAPGFRFHPTDEELVRYY---LKRKVCNKPFKFDAISVTDIYKSEP--WDLPDKSKLKSR 63
Query: 109 DGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKIL 168
D L +FF K Y+ G++ R TE +G W TGK R + + G KK L
Sbjct: 64 D-LEWYFFSMLDKKYSNGSKTNRA--TE---KG---YWKTTGKDREIRNGSRVVGMKKTL 114
Query: 169 VLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEG 201
V + G+ + E+TNWVMH+Y L + +K G
Sbjct: 115 VYHK--GRAPRGERTNWVMHEYRLSDEDLKKAG 145
Score = 39 (18.8 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 273 DMQQLKSDHFSFVPFRKSFDEVGI 296
D+ + D F+F + FD+ G+
Sbjct: 354 DLSCAQQDDFNFEDYLSFFDDEGL 377
>TAIR|locus:2167923 [details] [associations]
symbol:NAC101 "NAC-domain protein 101" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0007275
"multicellular organismal development" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0009741 "response to brassinosteroid stimulus"
evidence=IEP;RCA] [GO:0010089 "xylem development" evidence=RCA;IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010014
"meristem initiation" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR003441 Pfam:PF02365 PROSITE:PS51005 GO:GO:0009737
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045893
GO:GO:0009735 GO:GO:0003677 GO:GO:0003700 GO:GO:0010089
EMBL:AB019235 GO:GO:0009741 HSSP:Q9C932 HOGENOM:HOG000237406
SUPFAM:SSF101941 EMBL:DQ056734 EMBL:BT026510 IPI:IPI00523948
RefSeq:NP_201044.1 UniGene:At.55682 ProteinModelPortal:Q9LVA1
SMR:Q9LVA1 IntAct:Q9LVA1 STRING:Q9LVA1 EnsemblPlants:AT5G62380.1
GeneID:836359 KEGG:ath:AT5G62380 TAIR:At5g62380 eggNOG:NOG251785
InParanoid:Q9LVA1 OMA:GEEREWY PhylomeDB:Q9LVA1
ProtClustDB:CLSN2916769 Genevestigator:Q9LVA1 Uniprot:Q9LVA1
Length = 348
Score = 141 (54.7 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 55/187 (29%), Positives = 85/187 (45%)
Query: 49 LPAGVKFDPTDQELIDH-LEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGV- 106
+P G +F PTD+EL+D+ L+ KV M + + D + IE D I ++L G
Sbjct: 7 IPPGYRFHPTDEELVDYYLKNKVAFPGM-QVDVIKDVDLYKIEPWD-I-----QELCGRG 59
Query: 107 TRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKK 166
T + +FF K Y TGTR R G W TG+ + + + G +K
Sbjct: 60 TGEEREWYFFSHKDKKYPTGTRTNRAT--------GSGFWKATGRDKAIYSKQELVGMRK 111
Query: 167 ILVLYTNFGKNRKPEKTNWVMHQYHLGQHEE---EKEGELVVSKIFYQTQPRQCNWSEKS 223
LV Y G+ +K++W+MH+Y L E +EG VV + F + + N++
Sbjct: 112 TLVFYK--GRAPNGQKSDWIMHEYRLETDENGPPHEEG-WVVCRAF-KKKLTTMNYNNPR 167
Query: 224 ATTGEGS 230
G S
Sbjct: 168 TMMGSSS 174
>TAIR|locus:2095908 [details] [associations]
symbol:NAC047 "NAC domain containing protein 47"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0010260 "organ senescence" evidence=RCA]
InterPro:IPR003441 Pfam:PF02365 PROSITE:PS51005 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 HSSP:Q9C932
HOGENOM:HOG000237406 SUPFAM:SSF101941 EMBL:BT005985 EMBL:AK227417
IPI:IPI00524116 RefSeq:NP_187057.2 UniGene:At.42943
ProteinModelPortal:Q84TD6 SMR:Q84TD6 PRIDE:Q84TD6 DNASU:819562
EnsemblPlants:AT3G04070.1 GeneID:819562 KEGG:ath:AT3G04070
TAIR:At3g04070 eggNOG:NOG262700 InParanoid:Q84TD6 OMA:IYKKSHA
PhylomeDB:Q84TD6 ProtClustDB:CLSN2690697 Genevestigator:Q84TD6
Uniprot:Q84TD6
Length = 359
Score = 141 (54.7 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 53/151 (35%), Positives = 67/151 (44%)
Query: 49 LPAGVKFDPTDQELIDH-LEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVT 107
LP G +F PTD+ELI H L KV + P PL +I + I + P LP
Sbjct: 10 LPPGFRFHPTDEELILHYLRKKVSSS----PVPL------SIIADVDIYKSDPWDLPAKA 59
Query: 108 RDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMV-NGK----Q 161
G +F P + Y G R R + G W TG + + V NG+
Sbjct: 60 PFGEKEWYFFSPRDRKYPNGARPNRAAAS------GY--WKATGTDKLIAVPNGEGFHEN 111
Query: 162 KGCKKILVLYTNFGKNRKPEKTNWVMHQYHL 192
G KK LV Y GK K KTNW+MH+Y L
Sbjct: 112 IGIKKALVFYR--GKPPKGVKTNWIMHEYRL 140
>TAIR|locus:2060979 [details] [associations]
symbol:VND1 "vascular related NAC-domain protein 1"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] [GO:0010089 "xylem development" evidence=RCA]
InterPro:IPR003441 Pfam:PF02365 PROSITE:PS51005 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0010200
HSSP:Q9C932 HOGENOM:HOG000237406 SUPFAM:SSF101941 EMBL:AC006201
ProtClustDB:CLSN2683931 IPI:IPI00548323 PIR:G84559
RefSeq:NP_179397.1 UniGene:At.52795 ProteinModelPortal:Q9SL41
SMR:Q9SL41 IntAct:Q9SL41 STRING:Q9SL41 EnsemblPlants:AT2G18060.1
GeneID:816318 KEGG:ath:AT2G18060 TAIR:At2g18060 eggNOG:NOG272336
InParanoid:Q9SL41 OMA:DYDIGIC PhylomeDB:Q9SL41 ArrayExpress:Q9SL41
Genevestigator:Q9SL41 Uniprot:Q9SL41
Length = 365
Score = 141 (54.7 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 62/243 (25%), Positives = 97/243 (39%)
Query: 49 LPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTR 108
+P G +F PTD+EL+ + K A + + D + IE D + G
Sbjct: 9 VPPGFRFHPTDEELVGYYLRKKIASQKIDLDVIRDIDLYRIEPWD----LQEQCRIGYEE 64
Query: 109 DGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKIL 168
+FF K Y TGTR R + G W TG+ + V K G +K L
Sbjct: 65 QN-EWYFFSHKDKKYPTGTRTNR-----ATMAGF---WKATGRDKAVYDKTKLIGMRKTL 115
Query: 169 VLYTNFGKNRKPEKTNWVMHQYHLGQHEE---EKEGELVVSKIFYQTQPRQCNWSEK-SA 224
V Y N K K++W+MH+Y L E ++EG VV + F + Q +E S+
Sbjct: 116 VFYKGRAPNGK--KSDWIMHEYRLESDENAPPQEEG-WVVCRAFKKRATGQAKNTETWSS 172
Query: 225 TTGEGSSDPNXXXXXXXXXXXXKEMIPHRDHEVSGAQVAAAMSSYGAID-MQQLKSDHFS 283
+ PN + I + H + G + G +D + ++S+ F
Sbjct: 173 SYFYDEVAPNGVNSVMDPI----DYISKQQHNIFGKGLMCKQELEGMVDGINYIQSNQFI 228
Query: 284 FVP 286
+P
Sbjct: 229 QLP 231
>TAIR|locus:2122219 [details] [associations]
symbol:NAC076 "NAC domain containing protein 76"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009741 "response to brassinosteroid
stimulus" evidence=RCA] [GO:0010089 "xylem development"
evidence=RCA] InterPro:IPR003441 Pfam:PF02365 PROSITE:PS51005
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 EMBL:AL161588 EMBL:AL022141 HSSP:Q9C932
HOGENOM:HOG000237406 SUPFAM:SSF101941 IPI:IPI00538698 PIR:T04585
RefSeq:NP_195339.1 UniGene:At.50400 ProteinModelPortal:O65508
SMR:O65508 IntAct:O65508 STRING:O65508 EnsemblPlants:AT4G36160.1
GeneID:829773 KEGG:ath:AT4G36160 TAIR:At4g36160 eggNOG:NOG245426
InParanoid:O65508 OMA:YEERNEW PhylomeDB:O65508
ProtClustDB:CLSN2683931 ArrayExpress:O65508 Genevestigator:O65508
Uniprot:O65508
Length = 377
Score = 140 (54.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 50/173 (28%), Positives = 76/173 (43%)
Query: 40 LEAKPDWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTH 99
+E+ +P G +F PTD+EL+ + K A + + D + IE D
Sbjct: 1 MESVDQSCSVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIRDIDLYRIEPWD---LQE 57
Query: 100 PEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNG 159
++ R+ +FF K Y TGTR R + G W TG+ + V
Sbjct: 58 SCRIGYEERN--EWYFFSHKDKKYPTGTRTNR-----ATMAGF---WKATGRDKAVYDKS 107
Query: 160 KQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEE---EKEGELVVSKIF 209
K G +K LV Y G+ +KT+W+MH+Y L E ++EG VV + F
Sbjct: 108 KLIGMRKTLVFYK--GRAPNGQKTDWIMHEYRLESDENAPPQEEG-WVVCRAF 157
>TAIR|locus:2172334 [details] [associations]
symbol:ANAC087 "Arabidopsis NAC domain containing protein
87" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003441 Pfam:PF02365 PROSITE:PS51005 GO:GO:0005634
GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 EMBL:AB012246 HSSP:Q9C932 HOGENOM:HOG000237406
SUPFAM:SSF101941 EMBL:BT005713 EMBL:BT006070 EMBL:AK228369
IPI:IPI00517054 RefSeq:NP_197328.3 UniGene:At.23511
ProteinModelPortal:Q9FK44 SMR:Q9FK44 PaxDb:Q9FK44 PRIDE:Q9FK44
EnsemblPlants:AT5G18270.1 GeneID:831945 KEGG:ath:AT5G18270
TAIR:At5g18270 eggNOG:NOG276357 InParanoid:Q9FK44 OMA:KSARDEW
ProtClustDB:CLSN2684261 ArrayExpress:Q9FK44 Genevestigator:Q9FK44
Uniprot:Q9FK44
Length = 335
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 49/150 (32%), Positives = 66/150 (44%)
Query: 76 VKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSR-HFFHRPSKAYTTGTRKRRKIQ 134
+K L F GE + P LP + G +FF + + Y TG R R
Sbjct: 39 LKEKVLNSRFTAVAMGEADLNKCEPWDLPKRAKMGEKEFYFFCQRDRKYPTGMRTNRA-- 96
Query: 135 TECDLQGGETRWHKTGKTRPVMVNGKQKGC----KKILVLYTNFGKNRKPEKTNWVMHQY 190
TE W TGK + + K KGC KK LV Y G+ K EKTNWVMH+Y
Sbjct: 97 TESGY------WKATGKDKEIF---KGKGCLVGMKKTLVFYR--GRAPKGEKTNWVMHEY 145
Query: 191 HL-GQHE-----EEKEGELVVSKIFYQTQP 214
L G++ + E VV ++F++ P
Sbjct: 146 RLEGKYSYYNLPKSARDEWVVCRVFHKNNP 175
>UNIPROTKB|Q5Z6B6 [details] [associations]
symbol:NAC76 "NAC domain-containing protein 76"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0009834 "secondary cell wall
biogenesis" evidence=ISS] [GO:0048829 "root cap development"
evidence=ISS] InterPro:IPR003441 Pfam:PF02365 PROSITE:PS51005
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0048829 GO:GO:0009834 SUPFAM:SSF101941 EMBL:AB028186
EMBL:AP005450 EMBL:AP004749 EMBL:AK102224 RefSeq:NP_001057779.1
UniGene:Os.4386 ProteinModelPortal:Q5Z6B6 GeneID:4341201
KEGG:dosa:Os06t0530400-01 KEGG:osa:4341201 Gramene:Q5Z6B6
eggNOG:NOG246062 GO:GO:0010455 Uniprot:Q5Z6B6
Length = 276
Score = 137 (53.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 49/181 (27%), Positives = 83/181 (45%)
Query: 47 LGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGV 106
L +P G +F PTD+EL+ + K A + + + + + +E D ++
Sbjct: 8 LSVPPGFRFHPTDEELLYYYLRKKVAYEAIDLDVIREIDLNKLEPWD-----LKDRCRIG 62
Query: 107 TRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPV-MVNGKQKGCK 165
T +FF K Y TGTR R T W TG+ + + + N + G +
Sbjct: 63 TGPQNEWYFFSHKDKKYPTGTRTNRA--TTAGF------WKATGRDKAIFLANACRIGMR 114
Query: 166 KILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEE-KEGELVVSKIFYQ-TQPRQCNWSEKS 223
K LV Y G+ +KT+W+MH+Y L Q + +E VV ++F + + R N ++ +
Sbjct: 115 KTLVFYV--GRAPHGKKTDWIMHEYRLDQDNVDVQEDGWVVCRVFMKKSYQRGLNPADMA 172
Query: 224 A 224
A
Sbjct: 173 A 173
>TAIR|locus:2095958 [details] [associations]
symbol:NAC046 "NAC domain containing protein 46"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0010286 "heat acclimation"
evidence=RCA] InterPro:IPR003441 Pfam:PF02365 PROSITE:PS51005
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
HSSP:Q9C932 HOGENOM:HOG000237406 SUPFAM:SSF101941 EMBL:AC011698
eggNOG:NOG276357 ProtClustDB:CLSN2684261 EMBL:AF361623
EMBL:AY081834 EMBL:AY084852 IPI:IPI00519087 RefSeq:NP_187056.1
UniGene:At.27906 ProteinModelPortal:Q9SQQ6 SMR:Q9SQQ6 IntAct:Q9SQQ6
DNASU:819561 EnsemblPlants:AT3G04060.1 GeneID:819561
KEGG:ath:AT3G04060 TAIR:At3g04060 InParanoid:Q9SQQ6 OMA:KTARDEW
PhylomeDB:Q9SQQ6 Genevestigator:Q9SQQ6 Uniprot:Q9SQQ6
Length = 338
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 45/132 (34%), Positives = 62/132 (46%)
Query: 91 GEDGICYTHPEKLPGVTRDGLSR-HFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKT 149
G+ + P LP + + G +FF + + Y TG R R + G W T
Sbjct: 53 GQADLNKNEPWDLPKIAKMGEKEFYFFCQRDRKYPTGMRTNR-----ATVSG---YWKAT 104
Query: 150 GKTRPVMVN-GKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHL-GQ---HEEEKEG--E 202
GK + + G G KK LV YT G+ K EKTNWVMH+Y L G+ H K E
Sbjct: 105 GKDKEIFRGKGCLVGMKKTLVFYT--GRAPKGEKTNWVMHEYRLDGKYSYHNLPKTARDE 162
Query: 203 LVVSKIFYQTQP 214
VV ++F++ P
Sbjct: 163 WVVCRVFHKNAP 174
>TAIR|locus:2083656 [details] [associations]
symbol:CUC1 "CUP-SHAPED COTYLEDON1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0048467 "gynoecium
development" evidence=IGI] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0010072 "primary shoot apical meristem specification"
evidence=TAS] [GO:0048527 "lateral root development" evidence=TAS]
[GO:0051782 "negative regulation of cell division" evidence=IMP]
[GO:0010223 "secondary shoot formation" evidence=IMP] [GO:0010093
"specification of floral organ identity" evidence=RCA] [GO:0048440
"carpel development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0009790 "embryo development"
evidence=IGI] [GO:0009908 "flower development" evidence=IGI;IMP]
[GO:0010014 "meristem initiation" evidence=IGI;IMP] [GO:0010160
"formation of organ boundary" evidence=IGI] InterPro:IPR003441
Pfam:PF02365 PROSITE:PS51005 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0048527 GO:GO:0010072 GO:GO:0010223 GO:GO:0051782 HSSP:Q9C932
HOGENOM:HOG000237406 SUPFAM:SSF101941 GO:GO:0048467 EMBL:BT026080
EMBL:AP001299 EMBL:AB049069 IPI:IPI00542075 RefSeq:NP_188135.1
UniGene:At.5743 ProteinModelPortal:Q9FRV4 SMR:Q9FRV4 STRING:Q9FRV4
DNASU:820748 EnsemblPlants:AT3G15170.1 GeneID:820748
KEGG:ath:AT3G15170 TAIR:At3g15170 eggNOG:NOG315701
InParanoid:Q9FRV4 OMA:SSAKDEW PhylomeDB:Q9FRV4
ProtClustDB:CLSN2915654 Genevestigator:Q9FRV4 GO:GO:0010160
Uniprot:Q9FRV4
Length = 310
Score = 138 (53.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 63/198 (31%), Positives = 87/198 (43%)
Query: 49 LPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTR 108
+P G +F PTD+ELI + K + D F + + + P +LP +
Sbjct: 20 MPPGFRFHPTDEELITYYLLK-KVLD--------SNFSCAAISQVDLNKSEPWELPEKAK 70
Query: 109 DGLSR-HFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQK---GC 164
G +FF + Y TG R R TE W TGK R + + K K G
Sbjct: 71 MGEKEWYFFTLRDRKYPTGLRTNRA--TEAGY------WKATGKDREIK-SSKTKSLLGM 121
Query: 165 KKILVLYTNFGKNRKPEKTNWVMHQYHL-GQ---H--EEEKEGELVVSKIFYQTQ--PRQ 216
KK LV Y G+ K EK+ WVMH+Y L G+ H + E V+ K+ ++ R+
Sbjct: 122 KKTLVFYK--GRAPKGEKSCWVMHEYRLDGKFSYHYISSSAKDEWVLCKVCLKSGVVSRE 179
Query: 217 CNW---SEKSATTGEGSS 231
N S SA TGE SS
Sbjct: 180 TNLISSSSSSAVTGEFSS 197
>TAIR|locus:2141075 [details] [associations]
symbol:NAC071 "NAC domain containing protein 71"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 EMBL:AL161547 EMBL:AL021889 HSSP:Q9C932
HOGENOM:HOG000237406 SUPFAM:SSF101941 IPI:IPI00542978 PIR:T05084
RefSeq:NP_193532.1 UniGene:At.32955 ProteinModelPortal:O49697
SMR:O49697 PaxDb:O49697 PRIDE:O49697 EnsemblPlants:AT4G17980.1
GeneID:827523 KEGG:ath:AT4G17980 TAIR:At4g17980 eggNOG:NOG246406
InParanoid:O49697 OMA:NDSSSIW PhylomeDB:O49697
ProtClustDB:CLSN2686026 ArrayExpress:O49697 Genevestigator:O49697
Uniprot:O49697
Length = 262
Score = 136 (52.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 50/151 (33%), Positives = 68/151 (45%)
Query: 49 LPAGVKFDPTDQELIDH-LEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVT 107
LP G +F PTD+ELI + L K+E ++ E IP I+ + P +LPG +
Sbjct: 6 LPPGFRFHPTDEELIGYYLSRKIEGLEIEL------EVIPVID----LYKFDPWELPGKS 55
Query: 108 ----RDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQ-- 161
RD L FF K Y G+R R + G W TGK R +
Sbjct: 56 FLPNRD-LEWFFFCPRDKKYANGSRTNRATKA------GY--WKATGKDRKITCKSSHVI 106
Query: 162 KGCKKILVLYTNFGKNRKPEKTNWVMHQYHL 192
G +K LV Y G+ ++TNW MH+Y L
Sbjct: 107 AGYRKTLVFYE--GRAPLGDRTNWFMHEYRL 135
>TAIR|locus:2198225 [details] [associations]
symbol:ATAF1 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009611
"response to wounding" evidence=IEP;RCA] [GO:0009788 "negative
regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0009414 "response to water deprivation"
evidence=RCA] [GO:0009620 "response to fungus" evidence=RCA]
[GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
[GO:0010200 "response to chitin" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR003441
Pfam:PF02365 PROSITE:PS51005 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009611 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009788 EMBL:AC009273
HOGENOM:HOG000237406 SUPFAM:SSF101941 eggNOG:NOG265262 EMBL:X74755
EMBL:AF370617 IPI:IPI00547269 PIR:E86148 PIR:S37101
RefSeq:NP_171677.1 UniGene:At.134 UniGene:At.57938
ProteinModelPortal:Q39013 SMR:Q39013 STRING:Q39013
EnsemblPlants:AT1G01720.1 GeneID:839265 KEGG:ath:AT1G01720
GeneFarm:4060 TAIR:At1g01720 InParanoid:Q39013 OMA:TSDSVPK
PhylomeDB:Q39013 ProtClustDB:CLSN2714451 Genevestigator:Q39013
GermOnline:AT1G01720 Uniprot:Q39013
Length = 289
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 39/108 (36%), Positives = 50/108 (46%)
Query: 86 IPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGET 144
+P I D Y P +LPG+ G +F P + Y G+R R G
Sbjct: 36 VPIIAEIDLYKYD-PWELPGLALYGEKEWYFFSPRDRKYPNGSRPNRS--------AGSG 86
Query: 145 RWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHL 192
W TG +P+ + K G KK LV Y GK K EKTNW+MH+Y L
Sbjct: 87 YWKATGADKPIGLP-KPVGIKKALVFYA--GKAPKGEKTNWIMHEYRL 131
>TAIR|locus:2155046 [details] [associations]
symbol:NAC105 "NAC domain containing protein 105"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009741 "response to brassinosteroid
stimulus" evidence=RCA] [GO:0010089 "xylem development"
evidence=RCA] InterPro:IPR003441 Pfam:PF02365 PROSITE:PS51005
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
HSSP:Q9C932 HOGENOM:HOG000237406 SUPFAM:SSF101941 EMBL:AB022211
EMBL:BT015824 EMBL:BT020216 IPI:IPI00528142 RefSeq:NP_201431.1
UniGene:At.50562 ProteinModelPortal:Q9FH59 SMR:Q9FH59 IntAct:Q9FH59
STRING:Q9FH59 DNASU:836762 EnsemblPlants:AT5G66300.1 GeneID:836762
KEGG:ath:AT5G66300 TAIR:At5g66300 eggNOG:NOG306559
InParanoid:Q9FH59 OMA:LESHQNS PhylomeDB:Q9FH59
ProtClustDB:CLSN2916400 Genevestigator:Q9FH59 Uniprot:Q9FH59
Length = 292
Score = 136 (52.9 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 47/165 (28%), Positives = 76/165 (46%)
Query: 49 LPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTR 108
+P G +F PTD+EL+ + K A + + + + IE D E+
Sbjct: 12 IPPGFRFHPTDEELVGYYLKKKIASQRIDLDVIREIDLYKIEPWD-----LQERCRIGYE 66
Query: 109 DGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKIL 168
+ +FF K Y TGTR R + G W TG+ + V +N K G +K L
Sbjct: 67 EQTEWYFFSHRDKKYPTGTRTNR-----ATVAGF---WKATGRDKAVYLNSKLIGMRKTL 118
Query: 169 VLYTNFGKNRKPEKTNWVMHQYH-LGQHEE---EKEGELVVSKIF 209
V Y G+ +K++W++H+Y+ L H+ ++EG VV + F
Sbjct: 119 VFYR--GRAPNGQKSDWIIHEYYSLESHQNSPPQEEG-WVVCRAF 160
>TAIR|locus:2011736 [details] [associations]
symbol:CUC3 "CUP SHAPED COTYLEDON3" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010014 "meristem initiation"
evidence=IGI;RCA;TAS] [GO:0010199 "organ boundary specification
between lateral organs and the meristem" evidence=IGI] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010073 "meristem
maintenance" evidence=RCA] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC012394 EMBL:AC015450 GO:GO:0010199 HSSP:Q9C932
HOGENOM:HOG000237406 SUPFAM:SSF101941 GO:GO:0010014 EMBL:AF543194
IPI:IPI00532542 PIR:H96791 RefSeq:NP_177768.1 UniGene:At.52530
ProteinModelPortal:Q9S851 SMR:Q9S851 STRING:Q9S851 DNASU:843975
EnsemblPlants:AT1G76420.1 GeneID:843975 KEGG:ath:AT1G76420
TAIR:At1g76420 eggNOG:NOG304604 InParanoid:Q9S851 OMA:SGIHISE
PhylomeDB:Q9S851 ProtClustDB:CLSN2913656 Genevestigator:Q9S851
Uniprot:Q9S851
Length = 334
Score = 137 (53.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 57/177 (32%), Positives = 77/177 (43%)
Query: 48 GLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVT 107
GLP G +F PTD+ELI A +K H + I E + C P +LP +
Sbjct: 21 GLPPGFRFHPTDEELITFYLA---SKIF---HGGLSG-IHISEVDLNRC--EPWELPEMA 71
Query: 108 RDGLSRHFFHR-PSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQK--GC 164
+ G +F+ + Y TG R R G W TGK + V G + G
Sbjct: 72 KMGEREWYFYSLRDRKYPTGLRTNRATTA------GY--WKATGKDKEVFSGGGGQLVGM 123
Query: 165 KKILVLYTNFGKNRKPE--KTNWVMHQYHLGQ---HEEEKEGELVVSKIFYQTQPRQ 216
KK LV Y K R P KT WVMH+Y L H + E V+ ++F +T R+
Sbjct: 124 KKTLVFY----KGRAPRGLKTKWVMHEYRLENDHSHRHTCKEEWVICRVFNKTGDRK 176
>TAIR|locus:2196641 [details] [associations]
symbol:NAC015 "NAC domain containing protein 15"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009834 "secondary cell wall
biogenesis" evidence=IMP] [GO:0010628 "positive regulation of gene
expression" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048829 "root cap
development" evidence=IMP] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0048829 EMBL:AC027035 IPI:IPI00522754
PIR:F86456 RefSeq:NP_174598.1 UniGene:At.51900 HSSP:Q9C932
ProteinModelPortal:Q9C878 SMR:Q9C878 EnsemblPlants:AT1G33280.1
GeneID:840223 KEGG:ath:AT1G33280 TAIR:At1g33280 eggNOG:NOG331537
HOGENOM:HOG000237406 InParanoid:Q9C878 OMA:LPRESEY PhylomeDB:Q9C878
ProtClustDB:CLSN2679250 Genevestigator:Q9C878 GO:GO:0009834
SUPFAM:SSF101941 Uniprot:Q9C878
Length = 305
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 46/165 (27%), Positives = 77/165 (46%)
Query: 48 GLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVT 107
G+P G +F PTD+EL+ + K + + + + + + IE D K+ G T
Sbjct: 7 GVPPGFRFHPTDEELLHYYLKKKISYEKFEMEVIKEVDLNKIEPWD---LQDRCKI-GST 62
Query: 108 RDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKI 167
+FF + Y TG+R R + W TG+ + + + K+ G +K
Sbjct: 63 PQN-EWYFFSHKDRKYPTGSRTNRATHSGF--------WKATGRDKCIRNSYKKIGMRKT 113
Query: 168 LVLYTNFGKNRKP--EKTNWVMHQYHLGQHEEEK-EGELVVSKIF 209
LV Y K R P +KT+W+MH+Y + E++ E VV ++F
Sbjct: 114 LVFY----KGRAPHGQKTDWIMHEYRIEDTEDDPCEDGWVVCRVF 154
>TAIR|locus:2009096 [details] [associations]
symbol:NAC017 "NAC domain containing protein 17"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006623 "protein targeting to vacuole"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0016192 "vesicle-mediated transport" evidence=RCA] [GO:0016197
"endosomal transport" evidence=RCA] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0003677 GO:GO:0003700 EMBL:AC007454 HSSP:Q9C932
SUPFAM:SSF101941 HOGENOM:HOG000253966 ProtClustDB:CLSN2688261
EMBL:AF361813 EMBL:AY133552 EMBL:BT000730 IPI:IPI00529787
PIR:B86466 RefSeq:NP_564440.1 UniGene:At.11394
ProteinModelPortal:Q9XIC5 SMR:Q9XIC5 PaxDb:Q9XIC5 PRIDE:Q9XIC5
EnsemblPlants:AT1G34190.1 GeneID:840318 KEGG:ath:AT1G34190
TAIR:At1g34190 eggNOG:NOG254495 InParanoid:Q9XIC5 OMA:NSAREFL
PhylomeDB:Q9XIC5 ArrayExpress:Q9XIC5 Genevestigator:Q9XIC5
Uniprot:Q9XIC5
Length = 557
Score = 140 (54.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 48/150 (32%), Positives = 72/150 (48%)
Query: 52 GVKFDPTDQELIDH-LEAKVEAKDM-VKPHPLIDEFIPTIEGEDGICYTHPEKLPG--VT 107
G +F PTD+EL+ + L+ K+ K + V ++D + PE+LPG +
Sbjct: 19 GFRFHPTDEELVMYYLKRKICRKRLRVNVIGVVDVY-----------KMDPEELPGQSML 67
Query: 108 RDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKK 166
+ G + F+ P S+ Y R R TE G W TGK R + N + G KK
Sbjct: 68 KTGDRQWFYFTPRSRKYPNAARSNRG--TE----NGY--WKATGKDRVIEYNSRSVGLKK 119
Query: 167 ILVLYTNFGKNRKPEKTNWVMHQYHLGQHE 196
LV Y G+ E+T+WVMH+Y + + E
Sbjct: 120 TLVFYR--GRAPSGERTDWVMHEYTMDEDE 147
>TAIR|locus:2044360 [details] [associations]
symbol:NST1 "NAC SECONDARY WALL THICKENING PROMOTING
FACTOR1" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=ISS] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009834 "secondary
cell wall biogenesis" evidence=IGI;IMP] [GO:0009901 "anther
dehiscence" evidence=IGI] [GO:0009809 "lignin biosynthetic process"
evidence=IGI] [GO:0010047 "fruit dehiscence" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] InterPro:IPR003441 Pfam:PF02365 PROSITE:PS51005
GO:GO:0005634 GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009901
GO:GO:0010047 EMBL:AC005310 GO:GO:0009809 HOGENOM:HOG000237406
GO:GO:0009834 SUPFAM:SSF101941 EMBL:BT002931 EMBL:BT020413
IPI:IPI00547385 PIR:T02678 RefSeq:NP_182200.2 UniGene:At.36457
ProteinModelPortal:Q84WP6 SMR:Q84WP6 PRIDE:Q84WP6
EnsemblPlants:AT2G46770.1 GeneID:819290 KEGG:ath:AT2G46770
TAIR:At2g46770 eggNOG:NOG247781 InParanoid:Q84WP6 OMA:NGRRIGM
PhylomeDB:Q84WP6 ProtClustDB:CLSN2684105 Genevestigator:Q84WP6
GermOnline:AT2G46770 Uniprot:Q84WP6
Length = 365
Score = 136 (52.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 46/149 (30%), Positives = 72/149 (48%)
Query: 49 LPAGVKFDPTDQELIDH-LEAKVEAKDMVKPHPLIDEFIPTIEGED--GICYTHPEKLPG 105
+P G +F PT++EL+ + L KV + + + + D + +E D +C K+ G
Sbjct: 16 VPPGFRFHPTEEELLQYYLRKKVNSIE-IDLDVIRDVDLNKLEPWDIQEMC-----KI-G 68
Query: 106 VTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCK 165
T +FF K Y TGTR R T W TG+ + + NG++ G +
Sbjct: 69 TTPQN-DWYFFSHKDKKYPTGTRTNRA--TAAGF------WKATGRDKIIYSNGRRIGMR 119
Query: 166 KILVLYTNFGKNRKP--EKTNWVMHQYHL 192
K LV Y K R P +K++W+MH+Y L
Sbjct: 120 KTLVFY----KGRAPHGQKSDWIMHEYRL 144
>TAIR|locus:2117017 [details] [associations]
symbol:NAC067 "NAC domain containing protein 67"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 EMBL:AF096370 EMBL:AL161492 HSSP:Q9C932
SUPFAM:SSF101941 HOGENOM:HOG000097075 IPI:IPI00546015 PIR:T01942
RefSeq:NP_192061.1 UniGene:At.54081 ProteinModelPortal:O82593
SMR:O82593 STRING:O82593 EnsemblPlants:AT4G01520.1 GeneID:828204
KEGG:ath:AT4G01520 TAIR:At4g01520 OMA:KVANERS PhylomeDB:O82593
ArrayExpress:O82593 Genevestigator:O82593 Uniprot:O82593
Length = 302
Score = 133 (51.9 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 55/178 (30%), Positives = 82/178 (46%)
Query: 50 PAGVKFDPTDQELIDH-LEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEK-LPGVT 107
P G +F PT +E+I+H L+ K+ K L+DE I I I P K LP +
Sbjct: 5 PTGYRFSPTGEEVINHYLKNKILGKTW-----LVDEAISEIN----ILNHKPSKDLPKLA 55
Query: 108 R---DGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTG---KTRPVMVNGKQ 161
R + L +FF P + YT + + K T G W +G K R NG
Sbjct: 56 RIQSEDLEWYFFS-PIE-YTNPNKMKMKRTT------GSGFWKPSGVDRKIRDKRGNGVV 107
Query: 162 KGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNW 219
G KK LV + GK+ +T WVMH+YH+ K + VV ++ Y+ + + ++
Sbjct: 108 IGIKKTLVYHE--GKSPHGVRTPWVMHEYHITCLPHHKR-KYVVCQVKYKGEAAEISY 162
>TAIR|locus:2075835 [details] [associations]
symbol:NAC052 "NAC domain containing protein 52"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0009555 "pollen development" evidence=IMP] InterPro:IPR003441
Pfam:PF02365 PROSITE:PS51005 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0009555 GO:GO:0003677
GO:GO:0003700 EMBL:AC011560 EMBL:AC013428 HSSP:Q9C932
SUPFAM:SSF101941 IPI:IPI00543522 RefSeq:NP_850554.1
UniGene:At.20993 ProteinModelPortal:Q9SQY0 SMR:Q9SQY0 STRING:Q9SQY0
PRIDE:Q9SQY0 EnsemblPlants:AT3G10490.2 GeneID:820213
KEGG:ath:AT3G10490 TAIR:At3g10490 eggNOG:NOG330222
HOGENOM:HOG000029101 InParanoid:Q9SQY0 OMA:ININEPP PhylomeDB:Q9SQY0
ProtClustDB:CLSN2688244 Genevestigator:Q9SQY0 Uniprot:Q9SQY0
Length = 451
Score = 135 (52.6 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 56/163 (34%), Positives = 72/163 (44%)
Query: 49 LPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTH-PEKLPGV- 106
L G +F PTD+EL+ + K V P+ + I GE I Y H P L
Sbjct: 27 LAPGFRFHPTDEELVSYY-----LKRKVLGQPVRFDAI----GEVDI-YKHEPWDLAVFS 76
Query: 107 ---TRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKG 163
TRD +F+ K Y G R R +G W TGK R + + G
Sbjct: 77 RLKTRDQ-EWYFYSALDKKYGNGARMNRATN-----RG---YWKATGKDREIRRDILLLG 127
Query: 164 CKKILVLYTNFGKNRKPE--KTNWVMHQYHLGQHEEEKEGELV 204
KK LV F R P+ +TNWVMH+Y L ++E EK G LV
Sbjct: 128 MKKTLV----FHSGRAPDGLRTNWVMHEYRLVEYETEKNGNLV 166
>TAIR|locus:2026114 [details] [associations]
symbol:NAC016 "NAC domain containing protein 16"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR003441 Pfam:PF02365 PROSITE:PS51005
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0010200 EMBL:AC007454 HSSP:Q9C932 SUPFAM:SSF101941
IPI:IPI00525471 PIR:A86466 RefSeq:NP_001077648.1 UniGene:At.39788
ProteinModelPortal:Q9XIC4 SMR:Q9XIC4 PRIDE:Q9XIC4
EnsemblPlants:AT1G34180.2 GeneID:840317 KEGG:ath:AT1G34180
TAIR:At1g34180 HOGENOM:HOG000253966 OMA:RCKNAKE PhylomeDB:Q9XIC4
ProtClustDB:CLSN2688261 ArrayExpress:Q9XIC4 Genevestigator:Q9XIC4
Uniprot:Q9XIC4
Length = 576
Score = 135 (52.6 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 48/165 (29%), Positives = 77/165 (46%)
Query: 52 GVKFDPTDQELIDH-LEAKVEAKDM-VKPHPLIDEFI--PT-IEGEDGICYTHPEKLPGV 106
G +F PTD+EL+ + L+ K+ K + V ++D + P+ + G + +
Sbjct: 19 GFRFHPTDEELVVYYLKRKICCKKLRVNAIGVVDVYKVDPSELPGNFQHLLIDFDSCLSM 78
Query: 107 TRDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCK 165
+ G + FF P ++ Y R R T G W TGK R + N + G K
Sbjct: 79 LKTGDRQWFFFTPRNRKYPNAARSSRGTAT------GY--WKATGKDRVIEYNSRSVGLK 130
Query: 166 KILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFY 210
K LV Y G+ E+T+WVMH+Y + +EE+ G +K +Y
Sbjct: 131 KTLVFYR--GRAPNGERTDWVMHEYTM---DEEELGRCKNAKEYY 170
>TAIR|locus:2160324 [details] [associations]
symbol:NAC080 "NAC domain containing protein 80"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 HSSP:Q9C932 HOGENOM:HOG000237406
SUPFAM:SSF101941 EMBL:AB010070 ProtClustDB:CLSN2686918
EMBL:BT006419 EMBL:AK228027 IPI:IPI00525647 RefSeq:NP_568182.2
UniGene:At.32689 ProteinModelPortal:Q9FLR3 SMR:Q9FLR3 DNASU:830661
EnsemblPlants:AT5G07680.1 GeneID:830661 KEGG:ath:AT5G07680
TAIR:At5g07680 InParanoid:Q9FLR3 OMA:KEDDEQM PhylomeDB:Q9FLR3
Genevestigator:Q9FLR3 Uniprot:Q9FLR3
Length = 329
Score = 131 (51.2 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 43/129 (33%), Positives = 60/129 (46%)
Query: 91 GEDGICYTHPEKLPGVTRDGLSR-HFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKT 149
GE + P +LP + G +FF + Y TG R R Q G W T
Sbjct: 50 GEVDLNKAEPWELPYKAKIGEKEWYFFCVRDRKYPTGLRTNRATQA------GY--WKAT 101
Query: 150 GKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHL-GQ---HEEEK--EGEL 203
GK + + G KK LV Y G+ K +KTNWVMH+Y L G+ H K + E
Sbjct: 102 GKDKEIFRGKSLVGMKKTLVFYR--GRAPKGQKTNWVMHEYRLDGKLSAHNLPKTAKNEW 159
Query: 204 VVSKIFYQT 212
V+ ++F++T
Sbjct: 160 VICRVFHKT 168
>TAIR|locus:2079562 [details] [associations]
symbol:NAC066 "NAC domain protein 66" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009834 "secondary cell wall biogenesis"
evidence=IMP] [GO:0009901 "anther dehiscence" evidence=IGI]
[GO:0016020 "membrane" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR003441 Pfam:PF02365 PROSITE:PS51005 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0016020
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009901
EMBL:AL138642 HOGENOM:HOG000237406 GO:GO:0009834 SUPFAM:SSF101941
ProtClustDB:CLSN2684105 EMBL:AY084323 IPI:IPI00524412 PIR:T47983
RefSeq:NP_191750.1 UniGene:At.34210 ProteinModelPortal:Q9M274
SMR:Q9M274 PRIDE:Q9M274 EnsemblPlants:AT3G61910.1 GeneID:825364
KEGG:ath:AT3G61910 TAIR:At3g61910 eggNOG:NOG278110
InParanoid:Q9M274 OMA:CKNMISS PhylomeDB:Q9M274
Genevestigator:Q9M274 GermOnline:AT3G61910 Uniprot:Q9M274
Length = 334
Score = 131 (51.2 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 45/150 (30%), Positives = 69/150 (46%)
Query: 49 LPAGVKFDPTDQELIDH-LEAKVEAKDMVKPHPLID-EFIPTIEGEDGICYTHPEKLPGV 106
+P G +F PT++EL+ + L K+ +K ID + IP I+ + E
Sbjct: 11 VPPGFRFHPTEEELLKYYLRKKISN---IK----IDLDVIPDIDLNKLEPWDIQEMCKIG 63
Query: 107 TRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKK 166
T +F+ K Y TGTR R T W TG+ + + NG + G +K
Sbjct: 64 TTPQNDWYFYSHKDKKYPTGTRTNRA--TTVGF------WKATGRDKTIYTNGDRIGMRK 115
Query: 167 ILVLYTNFGKNRKP--EKTNWVMHQYHLGQ 194
LV Y K R P +K++W+MH+Y L +
Sbjct: 116 TLVFY----KGRAPHGQKSDWIMHEYRLDE 141
>TAIR|locus:2016049 [details] [associations]
symbol:VND7 "vascular related NAC-domain protein 7"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IEP] [GO:0009741 "response to brassinosteroid
stimulus" evidence=IEP;RCA] [GO:0010089 "xylem development"
evidence=RCA;IMP;TAS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0007155 "cell
adhesion" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
[GO:0042546 "cell wall biogenesis" evidence=RCA] [GO:0044036 "cell
wall macromolecule metabolic process" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR003441 Pfam:PF02365 PROSITE:PS51005 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0045893
GO:GO:0009735 GO:GO:0003677 GO:GO:0003700 EMBL:AC021665
GO:GO:0010089 GO:GO:0009741 HSSP:Q9C932 HOGENOM:HOG000237406
SUPFAM:SSF101941 EMBL:AY085424 EMBL:BT026447 IPI:IPI00526789
PIR:B96742 RefSeq:NP_177338.1 UniGene:At.35148
ProteinModelPortal:Q9C8W9 SMR:Q9C8W9 IntAct:Q9C8W9 STRING:Q9C8W9
EnsemblPlants:AT1G71930.1 GeneID:843524 KEGG:ath:AT1G71930
TAIR:At1g71930 eggNOG:NOG279722 InParanoid:Q9C8W9 OMA:KMEPWDI
PhylomeDB:Q9C8W9 ProtClustDB:CLSN2679296 Genevestigator:Q9C8W9
Uniprot:Q9C8W9
Length = 324
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 63/251 (25%), Positives = 103/251 (41%)
Query: 49 LPAGVKFDPTDQELIDH-LEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVT 107
+P G +F PT++EL+ + L+ K+ + M +I E I + E KL G
Sbjct: 9 MPPGFRFHPTEEELVGYYLDRKINS--MKSALDVIVE-IDLYKMEPWDIQARC-KL-GYE 63
Query: 108 RDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKI 167
+FF + Y TGTR R T W TG+ + V+ G +K
Sbjct: 64 EQN-EWYFFSHKDRKYPTGTRTNRA--TAAGF------WKATGRDKAVLSKNSVIGMRKT 114
Query: 168 LVLYTNFGKNRKPEKTNWVMHQYHLGQHE---EEKEGELVVSKIFYQTQPRQCN-----W 219
LV Y N + K++W+MH+Y L E ++EG VV + F + P Q W
Sbjct: 115 LVYYKGRAPNGR--KSDWIMHEYRLQNSELAPVQEEG-WVVCRAFRKPIPNQRPLGYEPW 171
Query: 220 SEK----SATTGEGSS---DPNXXXXXXXXXXXXKEMIPHRDHEVSGAQVAAAMSSYGAI 272
+ ++ SS + + +M+ +H + +++M YG I
Sbjct: 172 QNQLYHVESSNNYSSSVTMNTSHHIGASSSSHNLNQMLMSNNH-YNPNNTSSSMHQYGNI 230
Query: 273 DMQQLKSDHFS 283
++ QL S S
Sbjct: 231 ELPQLDSPSLS 241
>TAIR|locus:2095007 [details] [associations]
symbol:NAC058 "NAC domain containing protein 58"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0010089 "xylem development"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003677 GO:GO:0003700 EMBL:AB026658 HSSP:Q9C932
HOGENOM:HOG000237406 SUPFAM:SSF101941 IPI:IPI00522936
RefSeq:NP_188469.1 UniGene:At.53370 ProteinModelPortal:Q9LS50
SMR:Q9LS50 EnsemblPlants:AT3G18400.1 GeneID:821369
KEGG:ath:AT3G18400 TAIR:At3g18400 eggNOG:NOG283642
InParanoid:Q9LS50 OMA:LPAKASM PhylomeDB:Q9LS50
ProtClustDB:CLSN2719524 Genevestigator:Q9LS50 Uniprot:Q9LS50
Length = 314
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 41/115 (35%), Positives = 53/115 (46%)
Query: 100 PEKLPGVTRDGLSR-HFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVN 158
P LP G +FF + + Y TG R R TE W TGK + + +
Sbjct: 47 PWDLPAKASMGEKEWYFFSQRDRKYPTGLRTNRA--TEAGY------WKTTGKDKEIYRS 98
Query: 159 GKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEE----EKEGELVVSKIF 209
G G KK LV Y G+ K EK+NWVMH+Y L + KE E VV ++F
Sbjct: 99 GVLVGMKKTLVFYK--GRAPKGEKSNWVMHEYRLESKQPFNPTNKE-EWVVCRVF 150
>TAIR|locus:2097720 [details] [associations]
symbol:NAC045 "NAC domain containing protein 45"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003677 GO:GO:0003700 SUPFAM:SSF101941 EMBL:BT030461
IPI:IPI00521966 RefSeq:NP_186970.2 UniGene:At.41017
ProteinModelPortal:A4VCM0 SMR:A4VCM0 IntAct:A4VCM0
EnsemblPlants:AT3G03200.1 GeneID:821226 KEGG:ath:AT3G03200
TAIR:At3g03200 eggNOG:NOG290885 HOGENOM:HOG000239673
InParanoid:A4VCM0 OMA:LDETECE PhylomeDB:A4VCM0
ProtClustDB:CLSN2686325 ArrayExpress:A4VCM0 Genevestigator:A4VCM0
Uniprot:A4VCM0
Length = 479
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 48/156 (30%), Positives = 69/156 (44%)
Query: 47 LGLPAGVKFDPTDQELIDH-LEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPG 105
+ LP G +F PTD+ELI + L+ K+ ++ E I ++ + P LPG
Sbjct: 4 VSLPPGFRFHPTDEELITYYLKRKINGLEIEL------EVIAEVD----LYKCEPWDLPG 53
Query: 106 ---VTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQK 162
+ +FF + Y G+R R + GG W TGK R V +
Sbjct: 54 KSLLPSKDQEWYFFSPRDRKYPNGSRTNRATK------GGY--WKATGKDRRVSWRDRAI 105
Query: 163 GCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEE 198
G KK LV Y G+ +T WVMH+Y L + E E
Sbjct: 106 GTKKTLVYYR--GRAPHGIRTGWVMHEYRLDETECE 139
>TAIR|locus:2163153 [details] [associations]
symbol:NAC100 "NAC domain containing protein 100"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AB010073 HSSP:Q9C932 HOGENOM:HOG000237406 SUPFAM:SSF101941
EMBL:AY054644 EMBL:AY081496 EMBL:AY085102 IPI:IPI00529416
RefSeq:NP_200951.1 UniGene:At.7461 ProteinModelPortal:Q9FLJ2
SMR:Q9FLJ2 PaxDb:Q9FLJ2 PRIDE:Q9FLJ2 DNASU:836264
EnsemblPlants:AT5G61430.1 GeneID:836264 KEGG:ath:AT5G61430
TAIR:At5g61430 eggNOG:NOG255211 InParanoid:Q9FLJ2 OMA:HAMIENN
PhylomeDB:Q9FLJ2 ProtClustDB:CLSN2686918 Genevestigator:Q9FLJ2
Uniprot:Q9FLJ2
Length = 336
Score = 128 (50.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 42/129 (32%), Positives = 61/129 (47%)
Query: 91 GEDGICYTHPEKLPGVTRDGLSR-HFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKT 149
GE + + P +LP + + G +FF + Y TG R R TE W T
Sbjct: 49 GEVDLNKSEPWELPWMAKMGEKEWYFFCVRDRKYPTGLRTNRA--TEAGY------WKAT 100
Query: 150 GKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHL-GQ---HEEEK--EGEL 203
GK + + G KK LV Y G+ K +KTNWVMH+Y L G+ H K + E
Sbjct: 101 GKDKEIYRGKSLVGMKKTLVFYR--GRAPKGQKTNWVMHEYRLEGKFSAHNLPKTAKNEW 158
Query: 204 VVSKIFYQT 212
V+ ++F ++
Sbjct: 159 VICRVFQKS 167
>TAIR|locus:2090176 [details] [associations]
symbol:NAC3 "NAC domain containing protein 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;TAS] [GO:0009414 "response to water
deprivation" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0007154 "cell
communication" evidence=RCA] [GO:0007165 "signal transduction"
evidence=RCA] [GO:0009409 "response to cold" evidence=RCA]
[GO:0009611 "response to wounding" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009723
"response to ethylene stimulus" evidence=RCA] [GO:0009733 "response
to auxin stimulus" evidence=RCA] [GO:0009737 "response to abscisic
acid stimulus" evidence=RCA] [GO:0009738 "abscisic acid mediated
signaling pathway" evidence=RCA] [GO:0009753 "response to jasmonic
acid stimulus" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0010363 "regulation of plant-type
hypersensitive response" evidence=RCA] [GO:0030968 "endoplasmic
reticulum unfolded protein response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR003441 Pfam:PF02365 PROSITE:PS51005 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0009414
GO:GO:0003700 GO:GO:0006351 HSSP:Q9C932 HOGENOM:HOG000237406
SUPFAM:SSF101941 GO:GO:0009867 EMBL:AB022218 EMBL:AC024081
ProtClustDB:CLSN2679756 EMBL:AB049070 EMBL:AY084508 EMBL:BT025659
IPI:IPI00545362 RefSeq:NP_188169.1 UniGene:At.20460
ProteinModelPortal:Q9LDY8 SMR:Q9LDY8 STRING:Q9LDY8 DNASU:820789
EnsemblPlants:AT3G15500.1 GeneID:820789 KEGG:ath:AT3G15500
TAIR:At3g15500 eggNOG:NOG256273 InParanoid:Q9LDY8 OMA:MTSGREY
PhylomeDB:Q9LDY8 Genevestigator:Q9LDY8 Uniprot:Q9LDY8
Length = 317
Score = 127 (49.8 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 54/220 (24%), Positives = 84/220 (38%)
Query: 100 PEKLPGVTRDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVN 158
P LP G +F P + Y G+R R G W TG + +
Sbjct: 56 PWVLPSKALFGEKEWYFFSPRDRKYPNGSRPNRV--------AGSGYWKATGTDKVISTE 107
Query: 159 GKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHL----GQHEEEKEGELVVSKIFYQTQP 214
G++ G KK LV Y GK K KTNW+MH+Y L ++ K + V+ +I+ +
Sbjct: 108 GRRVGIKKALVFY--IGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQTS 165
Query: 215 RQCNWSEKSATTGEGSSDPNXXXXXXXXXXXXKEMIPHRDHEVSGAQVAAAMSSYGAI-- 272
Q T+G S N +++ HE+ + A S A+
Sbjct: 166 AQKQAYNNLMTSGREYS--NNGSSTSSSSHQYDDVLESL-HEIDNRSLGFAAGSSNALPH 222
Query: 273 DMQQLKSDH---FSFVPFRKSFDEVG-IGEASTAREAPAH 308
+ + ++H F + SFD IG+ S +H
Sbjct: 223 SHRPVLTNHKTGFQGLAREPSFDWANLIGQNSVPELGLSH 262
>TAIR|locus:2164895 [details] [associations]
symbol:NAC6 "NAC domain containing protein 6"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IPI] [GO:0006979 "response to oxidative
stress" evidence=IMP] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0010150 "leaf senescence"
evidence=IEP;IMP] [GO:0009651 "response to salt stress"
evidence=IEP;RCA] [GO:0010468 "regulation of gene expression"
evidence=IMP] [GO:0000303 "response to superoxide" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009723 "response
to ethylene stimulus" evidence=RCA] [GO:0009733 "response to auxin
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009738 "abscisic acid mediated
signaling pathway" evidence=RCA] [GO:0009743 "response to
carbohydrate stimulus" evidence=RCA] [GO:0009753 "response to
jasmonic acid stimulus" evidence=RCA] [GO:0009873 "ethylene
mediated signaling pathway" evidence=RCA] [GO:0010260 "organ
senescence" evidence=RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=RCA] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 GO:GO:0005634 EMBL:CP002688 GO:GO:0006979
GO:GO:0003677 GO:GO:0009651 GO:GO:0003700 GO:GO:0010150 HSSP:Q9C932
HOGENOM:HOG000237406 SUPFAM:SSF101941 EMBL:AB012243 EMBL:AY056327
EMBL:AY091191 EMBL:AY174163 IPI:IPI00525380 RefSeq:NP_198777.1
UniGene:At.24490 ProteinModelPortal:Q9FKA0 SMR:Q9FKA0 STRING:Q9FKA0
DNASU:833957 EnsemblPlants:AT5G39610.1 GeneID:833957
KEGG:ath:AT5G39610 TAIR:At5g39610 InParanoid:Q9FKA0 OMA:DYEASRI
PhylomeDB:Q9FKA0 ProtClustDB:CLSN2684091 ArrayExpress:Q9FKA0
Genevestigator:Q9FKA0 Uniprot:Q9FKA0
Length = 285
Score = 124 (48.7 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 44/141 (31%), Positives = 60/141 (42%)
Query: 76 VKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSR-HFFHRPSKAYTTGTRKRRKIQ 134
+KP F T GE + P LP + G +FF + Y TG R R
Sbjct: 38 LKPKVFNTFFSATAIGEVDLNKIEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRA-- 95
Query: 135 TECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHL-G 193
TE W TGK + + G KK LV Y G+ K KTNWVMH+Y L G
Sbjct: 96 TEAGY------WKATGKDKEIFKGKSLVGMKKTLVFYK--GRAPKGVKTNWVMHEYRLEG 147
Query: 194 QH-----EEEKEGELVVSKIF 209
++ + + E V+ ++F
Sbjct: 148 KYCIENLPQTAKNEWVICRVF 168
>TAIR|locus:2122804 [details] [associations]
symbol:NAC070 "NAC domain containing protein 70"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009834 "secondary cell wall
biogenesis" evidence=IMP] [GO:0010628 "positive regulation of gene
expression" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048829 "root cap
development" evidence=IMP] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0048829 HSSP:Q9C932 HOGENOM:HOG000237406
ProtClustDB:CLSN2679250 GO:GO:0009834 SUPFAM:SSF101941
EMBL:AL049488 EMBL:AL161517 EMBL:AY133681 IPI:IPI00531593
PIR:T04050 RefSeq:NP_192773.1 UniGene:At.33635
ProteinModelPortal:Q9SV87 SMR:Q9SV87 DNASU:826627
EnsemblPlants:AT4G10350.1 GeneID:826627 KEGG:ath:AT4G10350
TAIR:At4g10350 eggNOG:NOG257280 InParanoid:Q9SV87 OMA:NRATHAG
PhylomeDB:Q9SV87 Genevestigator:Q9SV87 Uniprot:Q9SV87
Length = 341
Score = 125 (49.1 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 44/166 (26%), Positives = 75/166 (45%)
Query: 48 GLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVT 107
G+P G +F PTD+EL+ + K + + + + + +E D K+ G T
Sbjct: 8 GVPPGFRFHPTDEELLHYYLKKKISYQKFEMEVIREVDLNKLEPWD---LQERCKI-GST 63
Query: 108 RDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKI 167
+FF + Y TG+R R T W TG+ + + + K+ G +K
Sbjct: 64 PQN-EWYFFSHKDRKYPTGSRTNRA--THAGF------WKATGRDKCIRNSYKKIGMRKT 114
Query: 168 LVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEK----EGELVVSKIF 209
LV Y G+ +KT+W+MH+Y L ++ + E VV ++F
Sbjct: 115 LVFYK--GRAPHGQKTDWIMHEYRLEDADDPQANPSEDGWVVCRVF 158
>TAIR|locus:2114678 [details] [associations]
symbol:NAC062 "NAC domain containing protein 62"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009814 "defense response, incompatible interaction"
evidence=IMP] [GO:0070417 "cellular response to cold" evidence=IMP]
[GO:0002679 "respiratory burst involved in defense response"
evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded protein
response" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0010200
GO:GO:0070417 HSSP:Q9C932 SUPFAM:SSF101941 EMBL:AL132964
GO:GO:0009814 HOGENOM:HOG000074733 ProtClustDB:CLSN2684244
EMBL:AY059734 EMBL:BT000978 IPI:IPI00544743 PIR:T46230
RefSeq:NP_190522.1 UniGene:At.1032 UniGene:At.67285
ProteinModelPortal:Q9SCK6 SMR:Q9SCK6 IntAct:Q9SCK6 STRING:Q9SCK6
PaxDb:Q9SCK6 PRIDE:Q9SCK6 EnsemblPlants:AT3G49530.1 GeneID:824115
KEGG:ath:AT3G49530 TAIR:At3g49530 eggNOG:NOG259113 OMA:WYPELES
PhylomeDB:Q9SCK6 ArrayExpress:Q9SCK6 Genevestigator:Q9SCK6
Uniprot:Q9SCK6
Length = 469
Score = 127 (49.8 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 49/171 (28%), Positives = 78/171 (45%)
Query: 49 LPAGVKFDPTDQELIDH-LEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLP--G 105
LP G++F PTD+ELI + L K+ D D+ + I D IC P LP
Sbjct: 13 LPVGLRFRPTDEELIRYYLRRKINGHD--------DD-VKAIREID-ICKWEPWDLPDFS 62
Query: 106 VTRDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQK-- 162
V + S + P + Y +G+R+ R + G W TGK R + +GK
Sbjct: 63 VIKTKDSEWLYFCPLDRKYPSGSRQNR-----ATVAG---YWKATGKDRKIK-SGKTNII 113
Query: 163 GCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHE----EEKEGELVVSKIF 209
G K+ LV + G+ + +TNW++H+Y + + + V+ K+F
Sbjct: 114 GVKRTLVFHA--GRAPRGTRTNWIIHEYRATEDDLSGTNPGQSPFVICKLF 162
>TAIR|locus:2033745 [details] [associations]
symbol:NAC011 "NAC domain containing protein 11"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0003677 GO:GO:0003700 EMBL:AC007767 HSSP:Q9C932
HOGENOM:HOG000237406 SUPFAM:SSF101941 IPI:IPI00519863 PIR:F86450
RefSeq:NP_174529.2 UniGene:At.51883 ProteinModelPortal:Q9LQK5
SMR:Q9LQK5 PRIDE:Q9LQK5 EnsemblPlants:AT1G32510.1 GeneID:840145
KEGG:ath:AT1G32510 TAIR:At1g32510 eggNOG:NOG276538 OMA:YLHRRNE
PhylomeDB:Q9LQK5 ProtClustDB:CLSN2918491 Genevestigator:Q9LQK5
Uniprot:Q9LQK5
Length = 283
Score = 123 (48.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 54/169 (31%), Positives = 80/169 (47%)
Query: 49 LPAGVKFDPTDQELIDH-LEAKVEAKDM-VKPHPLID--EFIPTIEGEDGICYTHPEK-- 102
LP G +F PTD+EL+ + L + E ++ ++ PL+D +F P + PEK
Sbjct: 6 LPPGFRFYPTDEELVGYYLHRRNEGLEIELEIIPLMDLYKFDP---------WELPEKSF 56
Query: 103 LPGVTRDGLSRHFF-HRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQ 161
LP RD + FF HR K Y G+R R ++ G W TGK R ++ +
Sbjct: 57 LPN--RD-MEWFFFCHRDRK-YQNGSRINRATKS------G--YWKATGKDRKIVCHSSS 104
Query: 162 K-------GCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGEL 203
GC+K LV Y G+ +T WVMH+Y L ++ +G L
Sbjct: 105 SSSSSSITGCRKTLVFY--MGRAPFGGRTEWVMHEYRLFDNDTS-QGSL 150
>TAIR|locus:2075855 [details] [associations]
symbol:NAC050 "NAC domain containing protein 50"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002686 GO:GO:0003677 GO:GO:0003700
SUPFAM:SSF101941 IPI:IPI00938922 RefSeq:NP_001154602.1
UniGene:At.20114 ProteinModelPortal:F4J3S6 SMR:F4J3S6 PRIDE:F4J3S6
EnsemblPlants:AT3G10480.3 GeneID:820212 KEGG:ath:AT3G10480
OMA:NINELPR Uniprot:F4J3S6
Length = 526
Score = 116 (45.9 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 36/100 (36%), Positives = 47/100 (47%)
Query: 107 TRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKK 166
TRD +FF K Y G R R +G W TGK R + + + G KK
Sbjct: 113 TRDQ-EWYFFSALDKKYGNGARMNRATN-----KG---YWKATGKDREIRRDIQLLGMKK 163
Query: 167 ILVLYTNFGKNRKPE--KTNWVMHQYHLGQHEEEKEGELV 204
LV F R P+ +TNWVMH+Y L ++E E G L+
Sbjct: 164 TLV----FHSGRAPDGLRTNWVMHEYRLVEYETETNGSLL 199
Score = 54 (24.1 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 49 LPAGVKFDPTDQELIDH-LEAKVEAK 73
L G +F PTD+EL+ + L+ KV K
Sbjct: 27 LAPGFRFHPTDEELVSYYLKRKVLGK 52
>TAIR|locus:2116972 [details] [associations]
symbol:NTM1 "NAC with transmembrane motif1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0009736 "cytokinin mediated signaling pathway"
evidence=IMP] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0031965 "nuclear membrane" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0051302 "regulation of cell division" evidence=IMP]
InterPro:IPR003441 Pfam:PF02365 PROSITE:PS51005 GO:GO:0016021
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005789
GO:GO:0003677 GO:GO:0031965 GO:GO:0003700 GO:GO:0006351
GO:GO:0009736 GO:GO:0009965 EMBL:AF096370 EMBL:AL161492
SUPFAM:SSF101941 GO:GO:0051302 EMBL:DR751097 EMBL:DR751098
IPI:IPI00532058 PIR:T01940 RefSeq:NP_001078343.1 RefSeq:NP_192063.2
UniGene:At.70341 ProteinModelPortal:A8MQY1 SMR:A8MQY1 STRING:A8MQY1
EnsemblPlants:AT4G01540.1 GeneID:828149 KEGG:ath:AT4G01540
TAIR:At4g01540 eggNOG:NOG293416 HOGENOM:HOG000097075 OMA:NILSHKP
PhylomeDB:A8MQY1 ProtClustDB:CLSN2685503 Genevestigator:A8MQY1
Uniprot:A8MQY1
Length = 473
Score = 126 (49.4 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 54/176 (30%), Positives = 82/176 (46%)
Query: 52 GVKFDPTDQELIDH-LEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEK-LPGVTR- 108
G +F PT +E+I+H L+ K+ K + L+DE I I I P K LP + R
Sbjct: 7 GYRFSPTGEEVINHYLKNKLLGK-----YWLVDEAISEIN----ILSHKPSKDLPKLARI 57
Query: 109 --DGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMV---NGKQKG 163
+ L +FF P + YT + + K T G W TG R + NG G
Sbjct: 58 QSEDLEWYFFS-PIE-YTNPNKMKMKRTT------GSGFWKPTGVDREIRDKRGNGVVIG 109
Query: 164 CKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNW 219
KK LV + GK+ +T WVMH+YH+ K + VV ++ Y+ + + ++
Sbjct: 110 IKKTLVYHE--GKSPHGVRTPWVMHEYHITCLPHHKR-KYVVCQVKYKGEAAEISY 162
>TAIR|locus:2116982 [details] [associations]
symbol:NAC069 "NAC domain containing protein 69"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] InterPro:IPR003441 Pfam:PF02365 PROSITE:PS51005
GO:GO:0016021 GO:GO:0005886 GO:GO:0005634 GO:GO:0045893
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AF096370 EMBL:AL161492 HSSP:Q9C932
SUPFAM:SSF101941 HOGENOM:HOG000097075 EMBL:AK229312 IPI:IPI00518862
IPI:IPI00846963 IPI:IPI00889347 PIR:B85020 PIR:T01939
RefSeq:NP_001078344.1 RefSeq:NP_192064.1 UniGene:At.34408
ProteinModelPortal:Q9M126 SMR:Q9M126 EnsemblPlants:AT4G01550.1
GeneID:828144 KEGG:ath:AT4G01550 TAIR:At4g01550 eggNOG:NOG256077
OMA:EINICSY PhylomeDB:Q9M126 ProtClustDB:CLSN2685504
Genevestigator:Q9M126 Uniprot:Q9M126
Length = 457
Score = 128 (50.1 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 53/167 (31%), Positives = 77/167 (46%)
Query: 52 GVKFDPTDQELIDH-LEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTR-- 108
G +F PT +ELI+H L+ K+ K L+DE I I IC P LP +++
Sbjct: 7 GYRFYPTGEELINHYLKNKILGKTW-----LVDEAISEIN----ICSYDPIYLPSLSKIK 57
Query: 109 -DGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMV---NGKQKGC 164
D +FF P K YT+ +K K T W TG R + N + G
Sbjct: 58 SDDPVWYFFC-P-KEYTSAKKKVTKRTTSSGY------WKATGVDRKIKDKRGNRGEIGI 109
Query: 165 KKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQ 211
KK LV Y G+ K T WVMH+YH+ +++ V+ ++ Y+
Sbjct: 110 KKTLVYYE--GRVPKGVWTPWVMHEYHITCLPQDQRN-YVICQVMYK 153
Score = 39 (18.8 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 435 SSSDIKEESSMTNPQEAEW 453
S + I +ESSM ++ W
Sbjct: 386 SDTSIDKESSMVKTEKKSW 404
>TAIR|locus:2159073 [details] [associations]
symbol:NAC084 "NAC domain containing protein 84"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002688 GO:GO:0003677 GO:GO:0003700
EMBL:AB005230 HSSP:Q9C932 HOGENOM:HOG000237406 SUPFAM:SSF101941
EMBL:AY099635 EMBL:BT006254 IPI:IPI00518084 RefSeq:NP_568292.1
UniGene:At.31991 ProteinModelPortal:Q9FFX5 SMR:Q9FFX5
EnsemblPlants:AT5G14000.1 GeneID:831248 KEGG:ath:AT5G14000
TAIR:At5g14000 OMA:MEVEKRI PhylomeDB:Q9FFX5 ProtClustDB:CLSN2917633
ArrayExpress:Q9FFX5 Genevestigator:Q9FFX5 Uniprot:Q9FFX5
Length = 206
Score = 118 (46.6 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 41/154 (26%), Positives = 62/154 (40%)
Query: 80 PLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDL 139
PL IP + + ++HP PG ++ R+FF + K + R KI +
Sbjct: 41 PLPSSIIPVFD----LFFSHPLSFPGDQKEK-QRYFFCK--KREVSSNEHRIKISS---- 89
Query: 140 QGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEK 199
G+ W GK RP++ GK G ++ L Y + KT W M +Y L K
Sbjct: 90 --GDGYWKPIGKERPIIACGKTFGIRRTLAFYETNKSSSYCNKTRWSMTEYCLAGFASAK 147
Query: 200 -EGELVVSKIFYQTQPRQCNWSEKSATTGEGSSD 232
GE V Y R+ + K + EG +
Sbjct: 148 VSGEWAV----YNVYERKGSKGRKQRKSREGDDE 177
>TAIR|locus:504956335 [details] [associations]
symbol:ATAF2 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=ISS] [GO:0009611 "response to wounding"
evidence=IEP] [GO:0008361 "regulation of cell size" evidence=IMP]
[GO:0009416 "response to light stimulus" evidence=IEP] [GO:0009620
"response to fungus" evidence=IMP] [GO:0009744 "response to sucrose
stimulus" evidence=IEP] [GO:0009751 "response to salicylic acid
stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP] [GO:0043424 "protein histidine kinase
binding" evidence=IPI] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009753 GO:GO:0009611 GO:GO:0006355
GO:GO:0003677 GO:GO:0009744 GO:GO:0006351 GO:GO:0008361
GO:GO:0009751 GO:GO:0009416 GO:GO:0009620 EMBL:AL590346 HSSP:Q9C932
HOGENOM:HOG000237406 SUPFAM:SSF101941 ProtClustDB:CLSN2690143
EMBL:X74756 EMBL:AK118910 EMBL:AY080862 EMBL:AY133762 EMBL:AK228803
IPI:IPI00540814 IPI:IPI00969757 PIR:S37100 RefSeq:NP_680161.1
UniGene:At.27826 UniGene:At.71069 ProteinModelPortal:Q9C598
SMR:Q9C598 IntAct:Q9C598 STRING:Q9C598 EnsemblPlants:AT5G08790.1
GeneID:830779 KEGG:ath:AT5G08790 TAIR:At5g08790 eggNOG:NOG307254
OMA:ADEKPRT PhylomeDB:Q9C598 Genevestigator:Q9C598 Uniprot:Q9C598
Length = 283
Score = 121 (47.7 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 48/151 (31%), Positives = 66/151 (43%)
Query: 99 HPEKLPGVTRDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMV 157
+P +LP ++ G +F P + Y G+R R G W TG +P+
Sbjct: 48 NPWELPEMSLYGEKEWYFFSPRDRKYPNGSRPNRA--------AGTGYWKATGADKPI-- 97
Query: 158 NGKQK--GCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEE----KEGEL-----VVS 206
GK K G KK LV Y GK K KTNW+MH+Y L + K+ L V+
Sbjct: 98 -GKPKTLGIKKALVFYA--GKAPKGIKTNWIMHEYRLANVDRSASVNKKNNLRLDDWVLC 154
Query: 207 KIFYQ--TQPRQCNWSEKSATT--GEGSSDP 233
+I+ + T + EK TT E SS P
Sbjct: 155 RIYNKKGTMEKYFPADEKPRTTTMAEQSSSP 185
>TAIR|locus:2087037 [details] [associations]
symbol:NAC3 "NAC domain containing protein 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IPI] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0010150 "leaf senescence" evidence=IMP]
InterPro:IPR003441 Pfam:PF02365 PROSITE:PS51005 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0010150 EMBL:AB025615 HSSP:Q9C932 HOGENOM:HOG000237406
SUPFAM:SSF101941 EMBL:AP000388 ProtClustDB:CLSN2684091
EMBL:AY062638 EMBL:BT008716 IPI:IPI00533681 RefSeq:NP_189546.1
UniGene:At.27282 ProteinModelPortal:Q9LJW3 SMR:Q9LJW3 IntAct:Q9LJW3
DNASU:822547 EnsemblPlants:AT3G29035.1 GeneID:822547
KEGG:ath:AT3G29035 TAIR:At3g29035 eggNOG:NOG251960
InParanoid:Q9LJW3 OMA:ITHYLRP PhylomeDB:Q9LJW3
Genevestigator:Q9LJW3 Uniprot:Q9LJW3
Length = 318
Score = 122 (48.0 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 42/138 (30%), Positives = 61/138 (44%)
Query: 81 LIDEFIPTIE-GEDGICYTHPEKLPGVTRDGLSR-HFFHRPSKAYTTGTRKRRKIQTECD 138
+++ F I GE + P LP + G +FF + Y TG R R +
Sbjct: 46 VVNSFFSAIAIGEVDLNKVEPWDLPWKAKLGEKEWYFFCVRDRKYPTGLRTNRATKA--- 102
Query: 139 LQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHL-GQH-- 195
G W TGK + + G KK LV Y G+ K KTNWVMH+Y L G+
Sbjct: 103 ---GY--WKATGKDKEIFKGKSLVGMKKTLVFYK--GRAPKGVKTNWVMHEYRLEGKFAI 155
Query: 196 ---EEEKEGELVVSKIFY 210
+ + E V+S++F+
Sbjct: 156 DNLSKTAKNECVISRVFH 173
>TAIR|locus:2202820 [details] [associations]
symbol:FEZ "FEZ" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009733
"response to auxin stimulus" evidence=IEP] [GO:0045770 "positive
regulation of asymmetric cell division" evidence=IMP] [GO:0048103
"somatic stem cell division" evidence=IMP] [GO:0048829 "root cap
development" evidence=IMP] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AC005508 HOGENOM:HOG000237406 SUPFAM:SSF101941 IPI:IPI00518092
PIR:E86395 RefSeq:NP_174009.1 UniGene:At.51778
ProteinModelPortal:Q9ZVH0 SMR:Q9ZVH0 GeneID:837796
KEGG:ath:AT1G26870 TAIR:At1g26870 eggNOG:NOG302527
InParanoid:Q9ZVH0 PhylomeDB:Q9ZVH0 ArrayExpress:Q9ZVH0
Genevestigator:Q9ZVH0 GermOnline:AT1G26870 Uniprot:Q9ZVH0
Length = 418
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 44/144 (30%), Positives = 62/144 (43%)
Query: 52 GVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGL 111
G +F PTD+EL+ K V+ +PL E I ++ I P LP G
Sbjct: 19 GFRFHPTDEELVSFY-----LKRKVQHNPLSIELIRQLD----IYKYDPWDLPKFAMTGE 69
Query: 112 SRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQK--GCKKIL 168
+F+ P + Y +R R G W TG RP+ + K G KK L
Sbjct: 70 KEWYFYCPRDRKYRNSSRPNRVT--------GAGFWKATGTDRPIYSSEGNKCIGLKKSL 121
Query: 169 VLYTNFGKNRKPEKTNWVMHQYHL 192
V Y G+ K KT+W+MH++ L
Sbjct: 122 VFYK--GRAAKGVKTDWMMHEFRL 143
>TAIR|locus:2160634 [details] [associations]
symbol:NAC102 "NAC domain containing protein 102"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0001666 "response to hypoxia"
evidence=IMP] [GO:0009507 "chloroplast" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0030968 "endoplasmic reticulum
unfolded protein response" evidence=RCA] InterPro:IPR003441
Pfam:PF02365 PROSITE:PS51005 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0003677 GO:GO:0001666
GO:GO:0003700 GO:GO:0006351 EMBL:AB005234 HSSP:Q9C932
HOGENOM:HOG000237406 SUPFAM:SSF101941 EMBL:BT000896 EMBL:AY045843
EMBL:AY088431 IPI:IPI00537814 RefSeq:NP_201184.2 UniGene:At.49213
UniGene:At.75365 UniGene:At.8706 ProteinModelPortal:Q8H115
SMR:Q8H115 IntAct:Q8H115 STRING:Q8H115 EnsemblPlants:AT5G63790.1
GeneID:836499 KEGG:ath:AT5G63790 TAIR:At5g63790 eggNOG:NOG286637
OMA:RRCASEP PhylomeDB:Q8H115 ProtClustDB:CLSN2690143
ArrayExpress:Q8H115 Genevestigator:Q8H115 Uniprot:Q8H115
Length = 312
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 40/111 (36%), Positives = 51/111 (45%)
Query: 86 IPTIEGEDGICYTHPEKLPGVTRDGLSRHFF--HRPSKAYTTGTRKRRKIQTECDLQGGE 143
+P I E + +P +LP + G +F HR K Y G+R R G
Sbjct: 79 VPVI-AEIDLYKFNPWELPEMALYGEKEWYFFSHRDRK-YPNGSRPNRA--------AGT 128
Query: 144 TRWHKTGKTRPVMVNGKQK--GCKKILVLYTNFGKNRKPEKTNWVMHQYHL 192
W TG +P+ GK K G KK LV Y GK K KTNW+MH+Y L
Sbjct: 129 GYWKATGADKPI---GKPKTLGIKKALVFYA--GKAPKGIKTNWIMHEYRL 174
>TAIR|locus:2204685 [details] [associations]
symbol:NAC032 "NAC domain containing protein 32"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0010583 "response to cyclopentenone"
evidence=RCA] InterPro:IPR003441 Pfam:PF02365 PROSITE:PS51005
EMBL:CP002684 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
EMBL:AC010704 HSSP:Q9C932 HOGENOM:HOG000237406 SUPFAM:SSF101941
EMBL:BT008538 EMBL:AK118985 IPI:IPI00521336 PIR:G96803
RefSeq:NP_177869.1 UniGene:At.17802 ProteinModelPortal:Q9CAR0
SMR:Q9CAR0 STRING:Q9CAR0 EnsemblPlants:AT1G77450.1 GeneID:844081
KEGG:ath:AT1G77450 TAIR:At1g77450 OMA:ITELDLY PhylomeDB:Q9CAR0
ProtClustDB:CLSN2912859 ArrayExpress:Q9CAR0 Genevestigator:Q9CAR0
Uniprot:Q9CAR0
Length = 253
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 33/94 (35%), Positives = 42/94 (44%)
Query: 100 PEKLPGVTRDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVN 158
P LP + G +F P + Y G+R R G W TG +P+
Sbjct: 52 PWDLPDMALYGEKEWYFFSPRDRKYPNGSRPNRA--------AGTGYWKATGADKPIG-R 102
Query: 159 GKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHL 192
K G KK LV Y+ GK EKTNW+MH+Y L
Sbjct: 103 PKPVGIKKALVFYS--GKPPNGEKTNWIMHEYRL 134
>TAIR|locus:2011531 [details] [associations]
symbol:NAC019 "NAC domain containing protein 19"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009414 "response to water deprivation"
evidence=RCA;IMP] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0007165 "signal transduction" evidence=RCA]
[GO:0009409 "response to cold" evidence=RCA] [GO:0009611 "response
to wounding" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010286 "heat
acclimation" evidence=RCA] [GO:0010363 "regulation of plant-type
hypersensitive response" evidence=RCA] [GO:0042538 "hyperosmotic
salinity response" evidence=RCA] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0003677 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 EMBL:AC019018 HOGENOM:HOG000237406 SUPFAM:SSF101941
EMBL:AY065268 EMBL:AY117224 IPI:IPI00516327 PIR:B96570
RefSeq:NP_175697.1 UniGene:At.28621 PDB:1UT4 PDB:1UT7 PDB:3SWM
PDB:3SWP PDB:4DUL PDBsum:1UT4 PDBsum:1UT7 PDBsum:3SWM PDBsum:3SWP
PDBsum:4DUL ProteinModelPortal:Q9C932 SMR:Q9C932 IntAct:Q9C932
STRING:Q9C932 DNASU:841722 EnsemblPlants:AT1G52890.1 GeneID:841722
KEGG:ath:AT1G52890 TAIR:At1g52890 eggNOG:NOG256925
InParanoid:Q9C932 OMA:SSSHFED PhylomeDB:Q9C932
ProtClustDB:CLSN2679756 EvolutionaryTrace:Q9C932
Genevestigator:Q9C932 GermOnline:AT1G52890 Uniprot:Q9C932
Length = 317
Score = 120 (47.3 bits), Expect = 0.00015, P = 0.00015
Identities = 32/94 (34%), Positives = 41/94 (43%)
Query: 100 PEKLPGVTRDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVN 158
P LP G +F P + Y G+R R G W TG + +
Sbjct: 56 PWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRV--------AGSGYWKATGTDKIISTE 107
Query: 159 GKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHL 192
G++ G KK LV Y GK K KTNW+MH+Y L
Sbjct: 108 GQRVGIKKALVFY--IGKAPKGTKTNWIMHEYRL 139
>TAIR|locus:2164391 [details] [associations]
symbol:NAC103 "NAC domain containing protein 103"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 HSSP:Q9C932 HOGENOM:HOG000237406
SUPFAM:SSF101941 EMBL:AB008266 IPI:IPI00520409 RefSeq:NP_201211.1
UniGene:At.50553 ProteinModelPortal:Q9FMJ1 SMR:Q9FMJ1 DNASU:836527
EnsemblPlants:AT5G64060.1 GeneID:836527 KEGG:ath:AT5G64060
TAIR:At5g64060 eggNOG:NOG122520 InParanoid:Q9FMJ1 OMA:ANRSTEC
PhylomeDB:Q9FMJ1 ProtClustDB:CLSN2686235 Genevestigator:Q9FMJ1
Uniprot:Q9FMJ1
Length = 356
Score = 120 (47.3 bits), Expect = 0.00018, P = 0.00018
Identities = 46/147 (31%), Positives = 65/147 (44%)
Query: 49 LPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTR 108
L G +F PTD EL+ + ++ K M K +D E I P LP +
Sbjct: 6 LAPGFRFHPTDVELVRYY---LKRKVMGKKFQ-VDAI-----AEVDIYKFEPPDLPDKSC 56
Query: 109 DG---LSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCK 165
G L +FF K Y G + R TEC W TG+ R V N + G
Sbjct: 57 LGTGDLKWYFFCPREKKYPKGGKANRS--TECGY------WKTTGRDRDVSYNDEVTG-- 106
Query: 166 KILVLYTNFGKNRKPEKTNWVMHQYHL 192
KI L ++GK + ++T+WV+H+Y L
Sbjct: 107 KIRTLIYHYGKIPRGDRTDWVIHEYRL 133
>TAIR|locus:2176372 [details] [associations]
symbol:NAC090 "NAC domain containing protein 90"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
HOGENOM:HOG000237406 SUPFAM:SSF101941 EMBL:AB007651 EMBL:AY086944
IPI:IPI00524287 RefSeq:NP_197630.1 UniGene:At.43843
ProteinModelPortal:Q9FMR3 SMR:Q9FMR3 DNASU:832299
EnsemblPlants:AT5G22380.1 GeneID:832299 KEGG:ath:AT5G22380
TAIR:At5g22380 eggNOG:NOG284573 InParanoid:Q9FMR3 OMA:MADEVTI
PhylomeDB:Q9FMR3 ProtClustDB:CLSN2684475 Genevestigator:Q9FMR3
GermOnline:AT5G22380 Uniprot:Q9FMR3
Length = 235
Score = 113 (44.8 bits), Expect = 0.00044, P = 0.00044
Identities = 43/143 (30%), Positives = 62/143 (43%)
Query: 52 GVKFDPTDQELID-HLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVT-RD 109
G +F PT++EL+ +L ++E + H +I + E E +H + GV R
Sbjct: 8 GFRFYPTEEELVSFYLRNQLEGRSDDSMHRVIP-VLDVFEVEP----SHLPNVAGVRCRG 62
Query: 110 GLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMV-NGKQKGCKKIL 168
+ FF P + R R +T G W TG PV + K G KK +
Sbjct: 63 DAEQWFFFVPRQEREA--RGGRPSRTT-----GSGYWKATGSPGPVFSKDNKMIGAKKTM 115
Query: 169 VLYTNFGKNRKPEKTNWVMHQYH 191
V YT GK KT W M++YH
Sbjct: 116 VFYT--GKAPTGRKTKWKMNEYH 136
>TAIR|locus:2007166 [details] [associations]
symbol:NAP "NAC-like, activated by AP3/PI" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010150 "leaf senescence" evidence=IMP]
[GO:0009617 "response to bacterium" evidence=RCA] [GO:0045087
"innate immune response" evidence=RCA] [GO:0009825
"multidimensional cell growth" evidence=IMP] [GO:0009908 "flower
development" evidence=IMP] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0010150 GO:GO:0009908 EMBL:AC073178 GO:GO:0009825
HOGENOM:HOG000237406 SUPFAM:SSF101941 EMBL:AJ222713 EMBL:AY051015
EMBL:AF360201 EMBL:AY086124 IPI:IPI00545912 PIR:T52343
RefSeq:NP_564966.1 UniGene:At.24919 ProteinModelPortal:O49255
SMR:O49255 STRING:O49255 EnsemblPlants:AT1G69490.1 GeneID:843282
KEGG:ath:AT1G69490 TAIR:At1g69490 eggNOG:NOG316178
InParanoid:O49255 OMA:NGSMRLD PhylomeDB:O49255
ProtClustDB:CLSN2689107 Genevestigator:O49255 GermOnline:AT1G69490
Uniprot:O49255
Length = 268
Score = 114 (45.2 bits), Expect = 0.00048, P = 0.00048
Identities = 39/126 (30%), Positives = 54/126 (42%)
Query: 75 MVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRP-SKAYTTGTRKRRKI 133
M KP P+ IP ++ I P +LP T G + +F P + Y G R R
Sbjct: 32 MSKPCPV--SIIPEVD----IYKFDPWQLPEKTEFGENEWYFFSPRERKYPNGVRPNRAA 85
Query: 134 QTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLG 193
+ G W TG + + G KK LV Y G+ K KT+W+MH+Y L
Sbjct: 86 -----VSG---YWKATGTDKAIHSGSSNVGVKKALVFYK--GRPPKGIKTDWIMHEYRL- 134
Query: 194 QHEEEK 199
H+ K
Sbjct: 135 -HDSRK 139
>TAIR|locus:2056266 [details] [associations]
symbol:LOV1 "LONG VEGETATIVE PHASE 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003441 Pfam:PF02365 PROSITE:PS51005
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
EMBL:AC005312 HSSP:Q9C932 SUPFAM:SSF101941 IPI:IPI00528971
PIR:G84436 PIR:H84436 RefSeq:NP_565284.3 UniGene:At.12993
ProteinModelPortal:Q9ZVP8 SMR:Q9ZVP8 EnsemblPlants:AT2G02450.2
GeneID:814775 KEGG:ath:AT2G02450 TAIR:At2g02450
HOGENOM:HOG000241446 InParanoid:Q9ZVP8 OMA:RMIRSET PhylomeDB:Q9ZVP8
ProtClustDB:CLSN2715189 ArrayExpress:Q9ZVP8 Genevestigator:Q9ZVP8
Uniprot:Q9ZVP8
Length = 414
Score = 117 (46.2 bits), Expect = 0.00052, P = 0.00052
Identities = 33/113 (29%), Positives = 55/113 (48%)
Query: 100 PEKLPGVTRDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVN 158
P +LP + G +F+ P + Y G R R + G R ++ +RP+
Sbjct: 93 PWELPAMAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRSETSRPI--- 149
Query: 159 GKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEK--EGELVVSKIF 209
G KK LV Y+ GK K +T+W+M++Y L HE EK + E+ + +++
Sbjct: 150 ----GLKKTLVFYS--GKAPKGTRTSWIMNEYRLPHHETEKYQKAEISLCRVY 196
>TAIR|locus:2179877 [details] [associations]
symbol:NAC083 "NAC domain containing protein 83"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010089 "xylem development" evidence=RCA;IMP] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP] [GO:0010150
"leaf senescence" evidence=IMP] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009741 "response to brassinosteroid
stimulus" evidence=RCA] [GO:0009963 "positive regulation of
flavonoid biosynthetic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
InterPro:IPR003441 Pfam:PF02365 PROSITE:PS51005 GO:GO:0009737
EMBL:CP002688 GO:GO:0045892 GO:GO:0003677 GO:GO:0009651
GO:GO:0003700 GO:GO:0010150 EMBL:AL391711 GO:GO:0010089 HSSP:Q9C932
HOGENOM:HOG000237406 SUPFAM:SSF101941 ProtClustDB:CLSN2713478
EMBL:AF385734 EMBL:AY143964 IPI:IPI00537047 RefSeq:NP_196822.1
UniGene:At.10079 SMR:Q9FY93 IntAct:Q9FY93 STRING:Q9FY93
EnsemblPlants:AT5G13180.1 GeneID:831157 KEGG:ath:AT5G13180
TAIR:At5g13180 InParanoid:Q9FY93 OMA:SRTDWIM Genevestigator:Q9FY93
Uniprot:Q9FY93
Length = 252
Score = 113 (44.8 bits), Expect = 0.00054, P = 0.00054
Identities = 43/142 (30%), Positives = 55/142 (38%)
Query: 73 KDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRK 132
K V PL IP + +C P LPG R+FF Y G R R
Sbjct: 33 KRKVCSSPLPASIIPEFD----VCRADPWDLPGNLEK--ERYFFSTREAKYPNGNRSNRA 86
Query: 133 IQTECDLQGGETRWHKTGKTRPVMVN-GKQ-KGCKKILVLYTNFGKNRKPEKTNWVMHQY 190
G W TG + V+ + G Q G KK LV Y GK +T+W+MH+Y
Sbjct: 87 T--------GSGYWKATGIDKRVVTSRGNQIVGLKKTLVFYK--GKPPHGSRTDWIMHEY 136
Query: 191 HLGQHEEEKEGEL---VVSKIF 209
L G V+ +IF
Sbjct: 137 RLSSSPPSSMGPTQNWVLCRIF 158
>TAIR|locus:2051053 [details] [associations]
symbol:NAC041 "NAC domain containing protein 41"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR003441 Pfam:PF02365
PROSITE:PS51005 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 HSSP:Q9C932 HOGENOM:HOG000237406
SUPFAM:SSF101941 EMBL:AC002332 EMBL:AF325080 EMBL:AF410299
EMBL:AY093730 IPI:IPI00520081 PIR:A84746 RefSeq:NP_180906.1
UniGene:At.47520 ProteinModelPortal:O22798 SMR:O22798 IntAct:O22798
PRIDE:O22798 EnsemblPlants:AT2G33480.1 GeneID:817913
KEGG:ath:AT2G33480 TAIR:At2g33480 OMA:PGDCESE PhylomeDB:O22798
ProtClustDB:CLSN2713478 ArrayExpress:O22798 Genevestigator:O22798
Uniprot:O22798
Length = 268
Score = 113 (44.8 bits), Expect = 0.00063, P = 0.00063
Identities = 38/122 (31%), Positives = 51/122 (41%)
Query: 80 PLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDL 139
PL IP E +C + P LPG + +FF Y G R R
Sbjct: 41 PLPASVIP----ETDVCKSDPWDLPGDCESEM--YFFSTREAKYPNGNRSNRST------ 88
Query: 140 QGGETRWHKTGKTRPVMVNGKQK---GCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHE 196
G W TG + + GK+K G KK LV Y GK +TNWV+H+Y L +
Sbjct: 89 --GSGYWKATGLDKQI---GKKKLVVGMKKTLVFYK--GKPPNGTRTNWVLHEYRLVDSQ 141
Query: 197 EE 198
++
Sbjct: 142 QD 143
>TAIR|locus:2035604 [details] [associations]
symbol:NAC012 "NAC domain containing protein 12"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009834 "secondary cell wall
biogenesis" evidence=IGI;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0009809 "lignin
biosynthetic process" evidence=IGI] [GO:0010047 "fruit dehiscence"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] InterPro:IPR003441 Pfam:PF02365 PROSITE:PS51005
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:AC017118
GO:GO:0010047 GO:GO:0009809 HSSP:Q9C932 HOGENOM:HOG000237406
GO:GO:0009834 SUPFAM:SSF101941 EMBL:EF101892 IPI:IPI00535878
PIR:E86452 RefSeq:NP_174554.1 UniGene:At.51889
ProteinModelPortal:Q9LPI7 SMR:Q9LPI7 STRING:Q9LPI7
EnsemblPlants:AT1G32770.1 GeneID:840171 KEGG:ath:AT1G32770
TAIR:At1g32770 eggNOG:NOG279158 InParanoid:Q9LPI7 OMA:SINGQSK
PhylomeDB:Q9LPI7 ProtClustDB:CLSN2912769 Genevestigator:Q9LPI7
Uniprot:Q9LPI7
Length = 358
Score = 114 (45.2 bits), Expect = 0.00087, P = 0.00087
Identities = 44/148 (29%), Positives = 69/148 (46%)
Query: 49 LPAGVKFDPTDQELIDH-LEAKVEAKDMVKPHPLIDEF-IPTIEGEDGICYTHPEKLPGV 106
+P G +F PT++EL+ + L KV ++ + +I E + +E D E G
Sbjct: 16 VPPGFRFHPTEEELLHYYLRKKVNSQKI--DLDVIREVDLNKLEPWD----IQEECRIGS 69
Query: 107 TRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKK 166
T +FF K Y TGTR R + G W TG+ + + ++ G +K
Sbjct: 70 TPQN-DWYFFSHKDKKYPTGTRTNR-----ATVAGF---WKATGRDKIICSCVRRIGLRK 120
Query: 167 ILVLYTNFGKNRKP--EKTNWVMHQYHL 192
LV Y K R P +K++W+MH+Y L
Sbjct: 121 TLVFY----KGRAPHGQKSDWIMHEYRL 144
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.131 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 470 388 0.00093 117 3 11 23 0.46 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 79
No. of states in DFA: 617 (66 KB)
Total size of DFA: 283 KB (2147 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.08u 0.12s 30.20t Elapsed: 00:00:01
Total cpu time: 30.09u 0.12s 30.21t Elapsed: 00:00:01
Start: Thu May 9 16:34:53 2013 End: Thu May 9 16:34:54 2013