Query 012157
Match_columns 470
No_of_seqs 136 out of 1725
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 03:53:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012157.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012157hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1q3q_A Thermosome alpha subuni 100.0 6E-103 2E-107 821.1 53.0 464 1-468 5-468 (548)
2 1a6d_B Thermosome (beta subuni 100.0 7E-103 2E-107 820.4 50.8 463 2-468 4-466 (543)
3 3ko1_A Chaperonin; 9-fold symm 100.0 5E-103 2E-107 820.3 48.9 464 2-469 13-476 (553)
4 3iyg_A T-complex protein 1 sub 100.0 5E-102 2E-106 811.8 55.2 454 12-468 3-463 (529)
5 3iyg_G T-complex protein 1 sub 100.0 7E-102 2E-106 808.0 55.5 455 12-468 2-456 (515)
6 3ruv_A Chaperonin, CPN; double 100.0 7E-102 2E-106 812.0 53.6 459 2-468 3-461 (543)
7 1a6d_A Thermosome (alpha subun 100.0 6E-102 2E-106 812.7 50.6 459 4-468 7-465 (545)
8 3iyg_H T-complex protein 1 sub 100.0 1E-100 4E-105 798.2 54.2 452 9-469 1-458 (515)
9 3p9d_C T-complex protein 1 sub 100.0 2E-101 6E-106 810.3 43.2 467 1-468 1-529 (590)
10 3p9d_A T-complex protein 1 sub 100.0 1E-100 3E-105 805.1 48.2 459 7-468 12-479 (559)
11 3iyg_B T-complex protein 1 sub 100.0 9E-100 3E-104 791.9 54.8 448 11-469 2-455 (513)
12 3p9d_G T-complex protein 1 sub 100.0 2E-101 5E-106 809.7 41.8 460 1-468 6-470 (550)
13 3p9d_D T-complex protein 1 sub 100.0 1E-100 4E-105 800.5 42.3 464 1-469 1-472 (528)
14 3iyg_E T-complex protein 1 sub 100.0 4.1E-99 1E-103 787.9 54.1 452 11-468 2-457 (515)
15 3iyg_D T-complex protein 1 sub 100.0 3.9E-99 1E-103 787.8 53.3 450 13-468 5-461 (518)
16 3p9d_H T-complex protein 1 sub 100.0 1.1E-99 4E-104 798.5 47.9 459 5-469 11-481 (568)
17 3iyg_Z T-complex protein 1 sub 100.0 4.2E-99 1E-103 786.6 50.7 449 12-469 3-461 (517)
18 3p9d_E T-complex protein 1 sub 100.0 1.7E-99 6E-104 796.1 46.4 461 2-468 26-500 (562)
19 3p9d_F T-complex protein 1 sub 100.0 4E-99 1E-103 792.5 37.4 458 5-468 3-475 (546)
20 3iyg_Q T-complex protein 1 sub 100.0 8.1E-97 3E-101 770.1 54.2 449 10-468 1-453 (512)
21 3p9d_B T-complex protein 1 sub 100.0 3.1E-98 1E-102 783.3 37.0 454 5-469 3-462 (527)
22 3aq1_B Thermosome subunit; gro 100.0 9E-92 3.1E-96 729.4 38.8 419 47-468 1-419 (500)
23 1kp8_A Groel protein; chaperon 100.0 8.9E-84 3E-88 671.7 38.9 405 13-468 4-470 (547)
24 1we3_A CPN60(groel); chaperoni 100.0 2.1E-83 7.3E-88 669.9 40.6 405 13-468 4-470 (543)
25 1iok_A Chaperonin 60; chaperon 100.0 4.8E-84 1.7E-88 674.2 30.4 406 13-469 5-472 (545)
26 3rtk_A 60 kDa chaperonin 2; he 100.0 9.5E-83 3.2E-87 662.1 29.4 404 13-468 4-468 (546)
27 1gml_A T-complex protein 1 sub 100.0 1.1E-37 3.7E-42 279.8 19.2 174 208-382 1-174 (178)
28 1ass_A Thermosome; chaperonin, 100.0 5.2E-33 1.8E-37 244.3 13.9 154 214-369 1-154 (159)
29 3m6c_A 60 kDa chaperonin 1; ch 99.3 1E-11 3.5E-16 108.9 13.1 145 211-396 2-169 (194)
30 3osx_A 60 kDa chaperonin; alph 99.3 4.6E-11 1.6E-15 105.0 14.0 141 215-396 13-176 (201)
31 1srv_A Protein (groel (HSP60 c 99.3 7.4E-12 2.5E-16 104.7 7.2 113 216-353 1-135 (145)
32 1o13_A Probable NIFB protein; 70.6 10 0.00035 31.1 6.7 52 278-330 68-119 (136)
33 2yx6_A Hypothetical protein PH 67.7 12 0.00042 29.8 6.5 53 277-330 54-106 (121)
34 1eo1_A Hypothetical protein MT 65.2 15 0.00051 29.4 6.5 52 278-330 57-108 (124)
35 2wfb_A Putative uncharacterize 63.3 14 0.00049 29.3 6.0 52 278-330 59-111 (120)
36 2re2_A Uncharacterized protein 56.7 24 0.00081 28.9 6.3 51 278-330 71-121 (136)
37 1rdu_A Conserved hypothetical 55.3 15 0.00052 28.9 4.8 51 279-330 55-105 (116)
38 3v7q_A Probable ribosomal prot 45.6 52 0.0018 25.2 6.3 52 276-330 25-80 (101)
39 2lbw_A H/ACA ribonucleoprotein 44.1 61 0.0021 25.8 6.7 50 277-329 27-81 (121)
40 2qtd_A Uncharacterized protein 43.6 52 0.0018 25.2 6.1 49 280-330 50-98 (105)
41 3on1_A BH2414 protein; structu 42.8 54 0.0018 25.1 6.0 52 276-330 24-79 (101)
42 3v7e_A Ribosome-associated pro 41.1 58 0.002 23.9 5.7 50 277-329 18-71 (82)
43 2xzm_U Ribosomal protein L7AE 40.4 62 0.0021 26.1 6.2 50 277-329 31-85 (126)
44 4a18_G RPL30; ribosome, eukary 40.0 79 0.0027 24.3 6.6 52 276-330 28-84 (104)
45 2ooa_A E3 ubiquitin-protein li 37.5 68 0.0023 21.5 4.8 35 105-139 13-50 (52)
46 3psh_A Protein HI_1472; substr 35.6 58 0.002 30.5 6.2 51 280-330 78-154 (326)
47 3u5e_c L32, RP73, YL38, 60S ri 35.1 1E+02 0.0035 23.7 6.5 52 276-330 28-84 (105)
48 2ale_A SNU13, NHP2/L7AE family 34.9 52 0.0018 26.9 4.9 51 276-329 38-93 (134)
49 2r79_A Periplasmic binding pro 32.9 1E+02 0.0035 28.1 7.4 50 280-329 53-110 (283)
50 3iz5_f 60S ribosomal protein L 32.2 1.2E+02 0.0042 23.7 6.6 51 276-329 32-87 (112)
51 1xbi_A 50S ribosomal protein L 30.9 86 0.0029 24.8 5.6 50 277-329 36-90 (120)
52 2wi8_A Iron-uptake system-bind 29.9 96 0.0033 28.7 6.7 50 280-329 90-143 (311)
53 2q8p_A Iron-regulated surface 29.6 55 0.0019 29.4 4.8 50 280-329 54-109 (260)
54 2r7a_A Bacterial heme binding 28.7 96 0.0033 27.6 6.3 50 280-329 53-111 (256)
55 1vq8_F 50S ribosomal protein L 28.0 1.1E+02 0.0037 24.2 5.7 51 276-329 35-90 (120)
56 2aif_A Ribosomal protein L7A; 28.0 91 0.0031 25.3 5.3 52 276-330 47-103 (135)
57 2fc3_A 50S ribosomal protein L 27.8 1.2E+02 0.0039 24.2 5.9 51 276-329 34-89 (124)
58 3md9_A Hemin-binding periplasm 26.9 1.1E+02 0.0038 27.2 6.4 50 280-329 53-110 (255)
59 2etv_A Iron(III) ABC transport 26.5 84 0.0029 29.8 5.7 50 280-329 90-150 (346)
60 3ff4_A Uncharacterized protein 26.5 91 0.0031 24.8 5.0 39 277-315 73-112 (122)
61 3cpq_A 50S ribosomal protein L 25.7 1.9E+02 0.0065 22.3 6.7 51 276-329 27-82 (110)
62 1n2z_A Vitamin B12 transport p 25.6 82 0.0028 27.9 5.2 50 280-329 51-107 (245)
63 3o85_A Ribosomal protein L7AE; 24.8 1.3E+02 0.0045 23.8 5.7 51 276-329 37-92 (122)
64 1rlg_A 50S ribosomal protein L 24.6 1E+02 0.0034 24.3 4.9 51 276-329 33-88 (119)
65 1p90_A NAFY protein, hypotheti 21.8 1.4E+02 0.0049 24.4 5.5 30 285-315 66-95 (145)
66 2pw9_A Putative formate dehydr 20.6 80 0.0027 29.1 4.0 40 277-316 206-245 (268)
67 4hn9_A Iron complex transport 20.6 1.3E+02 0.0046 28.1 5.8 50 279-329 109-164 (335)
68 2zkr_f 60S ribosomal protein L 20.5 1.8E+02 0.0063 26.5 6.3 50 277-329 142-196 (266)
69 3jyw_G 60S ribosomal protein L 20.3 1.1E+02 0.0037 24.2 4.1 50 278-330 33-87 (113)
No 1
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=5.6e-103 Score=821.13 Aligned_cols=464 Identities=38% Similarity=0.653 Sum_probs=446.7
Q ss_pred CCCCccccccccccccchhHHHHHHHHHHHHHHHhhhcCCCCccceeeecCCCCEEEecChHHHHhhccccChhHHHHHH
Q 012157 1 MHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIE 80 (470)
Q Consensus 1 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~ 80 (470)
|+.|+.++++++++.+|.+++.+|+.||.+++++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|+++
T Consensus 5 ~~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e 84 (548)
T 1q3q_A 5 SGQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPAAKMMVE 84 (548)
T ss_dssp ----CCCSCTTCEEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTCCEEEESCHHHHHHHSCCCSHHHHHHHH
T ss_pred CCCCcccccCCcceechHHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCCCCeEEECCHHHHHHHhhccchHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcccccCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHhhc
Q 012157 81 LSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGT 160 (470)
Q Consensus 81 ~~~~~~~~~GDGttt~vlL~~~ll~~~~~li~~gi~~~~I~~~~~~a~~~~~~~l~~~~~~v~~~~~~~l~~v~~t~l~s 160 (470)
+|++||+++||||||+++|+++||+++.+++++|+||..|++||+.|++.++++|+++++|++..|++.|.++++|+|+|
T Consensus 85 ~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~s 164 (548)
T 1q3q_A 85 VAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITG 164 (548)
T ss_dssp HHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHSCS
T ss_pred HHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999877899999999999999
Q ss_pred ccccchHHHHHHHHHHHHhhcccccCCCccccCcccceeEEEecCCCcCCcceeeeEEEecccCCCCCCcceecCCeEEE
Q 012157 161 KFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIIL 240 (470)
Q Consensus 161 k~~~~~~~~l~~l~~~a~~~~~~~~~~g~~~~~~~~~I~i~~~~G~~~~~s~li~Giv~~~~~~~~~~~~~~~~~~kIll 240 (470)
|+.++|+++|++++++|+.+++.+. .|...+|++ +|+|++++|++++||++++|++|++++.|+ .||++++||||++
T Consensus 165 Ki~~~~~~~i~~livdAv~~V~~~~-~g~~~~d~~-~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~-~m~~~ien~kIll 241 (548)
T 1q3q_A 165 KNAESHKELLAKLAVEAVKQVAEKK-DGKYVVDLD-NIKFEKKAGEGVEESELVRGVVIDKEVVHP-RMPKRVENAKIAL 241 (548)
T ss_dssp STTGGGHHHHHHHHHHHHHHHCEES-SSSEECCGG-GEEEEEEEBSCGGGCEEESSEEESCCCSST-TSCSEESSEEEEE
T ss_pred cccccchHHHHHHHHHHHHHhcccc-CCCccccCC-eEEEEEecCCCccceEEEeeEEEeccCCCC-CCcceecCCEEEE
Confidence 9999999999999999999998532 133457775 699999999999999999999999999998 8999999999999
Q ss_pred EecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCHHHHHHHHHcCCeeeecCCHhHH
Q 012157 241 LDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDN 320 (470)
Q Consensus 241 ~~~~Le~~~~~~~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~vv~~v~~~~L 320 (470)
++++|++++++.++++.++++++++.+.+.|++++++++++|++.|+||||++++|++.+++||.++||++++++++++|
T Consensus 242 ~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~l 321 (548)
T 1q3q_A 242 INEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDM 321 (548)
T ss_dssp ECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHH
T ss_pred EecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCCcEEEccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCeeccCCCCCCCCccCCccceEEEEEECCeEEEEEEecCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHHH
Q 012157 321 NRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARN 400 (470)
Q Consensus 321 ~~ia~~tGa~i~s~~~~l~~~~lG~~~~~v~~~~~g~~~~~~~~~~~~~~~~TIll~g~t~~~l~e~~~~l~dal~~~~~ 400 (470)
+|||++|||++++++++++++++|+ |+.|++.++|+++|++|++|++++.+||+|||+|+.+++|.||+++||++++|+
T Consensus 322 e~ia~~tGa~ii~~l~~~~~~~LG~-a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~ 400 (548)
T 1q3q_A 322 EKLAKATGAKIVTNVKDLTPEDLGY-AEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKD 400 (548)
T ss_dssp HHHHHHHCCCCBSSGGGCCGGGCEE-ESEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCeEecccccCCHHHCCC-ceEEEEEEecCceEEEEecCCCCCeEEEEECCCChHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHhh
Q 012157 401 IIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQG 468 (470)
Q Consensus 401 ~~~~~~vv~GGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~ 468 (470)
++++|++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++++||+
T Consensus 401 a~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~ 468 (548)
T 1q3q_A 401 VMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVIS 468 (548)
T ss_dssp HHHSCEEEECTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHCCCcccCCcHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 99999999999999999999999998888899999999999999999999999999999999999985
No 2
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=6.9e-103 Score=820.42 Aligned_cols=463 Identities=38% Similarity=0.652 Sum_probs=434.5
Q ss_pred CCCccccccccccccchhHHHHHHHHHHHHHHHhhhcCCCCccceeeecCCCCEEEecChHHHHhhccccChhHHHHHHH
Q 012157 2 HSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIEL 81 (470)
Q Consensus 2 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~ 81 (470)
+.|+.+++++++..+|.+++..|+.||.+++++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++
T Consensus 4 ~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~Akll~e~ 83 (543)
T 1a6d_B 4 GQPIFILKEGTKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPAAKMMVEV 83 (543)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHHHHHHHSCCCSHHHHHHHHH
T ss_pred CcchhhcCCcchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHhhccchHHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcccccCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHhhcc
Q 012157 82 SRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTK 161 (470)
Q Consensus 82 ~~~~~~~~GDGttt~vlL~~~ll~~~~~li~~gi~~~~I~~~~~~a~~~~~~~l~~~~~~v~~~~~~~l~~v~~t~l~sk 161 (470)
|++|++++||||||+++|+++||+++.+++++|+||..|++||+.|++.++++|+++++|++..|++.|.++++|+|+||
T Consensus 84 a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~l~~va~tsl~sK 163 (543)
T 1a6d_B 84 SKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADEKALLLKMAQTSLNSK 163 (543)
T ss_dssp HTCTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTHHHHHHHHHHHHHTTS
T ss_pred HHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999999998767899999999999999
Q ss_pred cccchHHHHHHHHHHHHhhcccccCCCccccCcccceeEEEecCCCcCCcceeeeEEEecccCCCCCCcceecCCeEEEE
Q 012157 162 FTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILL 241 (470)
Q Consensus 162 ~~~~~~~~l~~l~~~a~~~~~~~~~~g~~~~~~~~~I~i~~~~G~~~~~s~li~Giv~~~~~~~~~~~~~~~~~~kIll~ 241 (470)
+.++|+++|++++++|+.+++.+. +|...+|++ +|+|++++|++++||++++|++|++++.|+ .||++++||||+++
T Consensus 164 i~~~~~~~i~~livdAv~~v~~~~-~g~~~~d~~-~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~-~m~~~ien~kIll~ 240 (543)
T 1a6d_B 164 SASVAKDKLAEISYEAVKSVAELR-DGKYYVDFD-NIQVVKKQGGAIDDTQLINGIIVDKEKVHP-GMPDVVKDAKIALL 240 (543)
T ss_dssp GGGGGHHHHHHHHHHHHHHHEEEC-SSSEEECGG-GEEEEEEESSCGGGCEEESEEEESCCCSST-TSCSEEEEEEEEEE
T ss_pred cccccHHHHHHHHHHHHHHhcccc-cCCcccccc-eEEEEEecCCCccceeEEccEEEecCCCCC-CCcceecCCeEEEE
Confidence 999999999999999999998531 243457775 699999999999999999999999999998 89999999999999
Q ss_pred ecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCHHHHHHHHHcCCeeeecCCHhHHH
Q 012157 242 DSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNN 321 (470)
Q Consensus 242 ~~~Le~~~~~~~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~vv~~v~~~~L~ 321 (470)
+++|++++++.++++.++++++++.+.+.|++++++++++|++.|+||||++++|++.+++||.++||++++++++++|+
T Consensus 241 ~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~v~k~~le 320 (543)
T 1a6d_B 241 DAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAGIYAVRRVKKSDMD 320 (543)
T ss_dssp SSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHH
T ss_pred ecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCCeeEeccCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCeeccCCCCCCCCccCCccceEEEEEECCeEEEEEEecCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHHHH
Q 012157 322 RIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNI 401 (470)
Q Consensus 322 ~ia~~tGa~i~s~~~~l~~~~lG~~~~~v~~~~~g~~~~~~~~~~~~~~~~TIll~g~t~~~l~e~~~~l~dal~~~~~~ 401 (470)
|||++|||++++++++++++++|+ |+.|++.++|+++|++|++|++++.+||+|||+|+.+++|.||+++||++++|++
T Consensus 321 ~ia~~tGa~iis~l~~l~~~~LG~-a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a 399 (543)
T 1a6d_B 321 KLAKATGASIVSTIDEISSSDLGT-AERVEQVKVGEDYMTFVTGCKNPKAVSILVRGETEHVVDEMERSITDSLHVVASA 399 (543)
T ss_dssp HHHHHHTCCEESCGGGCCGGGCEE-EEEEEEEEETTEEEEEEEEESSSSCEEEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCceecccccCCHHHCCC-ceEEEEEEecCceEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEecCCHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHhh
Q 012157 402 IKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQG 468 (470)
Q Consensus 402 ~~~~~vv~GGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~ 468 (470)
+++|++|||||++|++++.+|++++...++++|+++++|++||+.||++|++|||+|+.+++++|++
T Consensus 400 ~~~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~ 466 (543)
T 1a6d_B 400 LEDGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRA 466 (543)
T ss_dssp HHHCEEEETTTHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHCCCccCCccHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 9999999999999999999999999888999999999999999999999999999999999999985
No 3
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=5.2e-103 Score=820.33 Aligned_cols=464 Identities=34% Similarity=0.585 Sum_probs=436.5
Q ss_pred CCCccccccccccccchhHHHHHHHHHHHHHHHhhhcCCCCccceeeecCCCCEEEecChHHHHhhccccChhHHHHHHH
Q 012157 2 HSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIEL 81 (470)
Q Consensus 2 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~ 81 (470)
+.|+.++++++++.+|.+++.+|+.||+.++++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++
T Consensus 13 ~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~ 92 (553)
T 3ko1_A 13 GIPVIILKEGSSRTYGKEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAKLLVQI 92 (553)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHHHHHHSSCCCSHHHHHHHHH
T ss_pred CCeEEEEecCcccchhHHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhccceEEecCccchhhhhhccChhHHHHHHH
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcccccCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHhhcc
Q 012157 82 SRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTK 161 (470)
Q Consensus 82 ~~~~~~~~GDGttt~vlL~~~ll~~~~~li~~gi~~~~I~~~~~~a~~~~~~~l~~~~~~v~~~~~~~l~~v~~t~l~sk 161 (470)
|++||+++||||||+++|+++||+++.+++++|+||..|++||+.|++.++++|+++++|++..|++.|.++++|+++||
T Consensus 93 a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~e~L~~vA~tsl~sK 172 (553)
T 3ko1_A 93 AKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSINDTDLLRKIAMTSLSSK 172 (553)
T ss_dssp HHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTCHHHHHHHHHHHHTTS
T ss_pred hhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999998778999999999999999
Q ss_pred cccchHHHHHHHHHHHHhhcccccCCCccccCcccceeEEEecCCCcCCcceeeeEEEecccCCCCCCcceecCCeEEEE
Q 012157 162 FTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILL 241 (470)
Q Consensus 162 ~~~~~~~~l~~l~~~a~~~~~~~~~~g~~~~~~~~~I~i~~~~G~~~~~s~li~Giv~~~~~~~~~~~~~~~~~~kIll~ 241 (470)
+.+.|+++|++++++|+.+++.+. +|...+|++ +|+|++++|+++.+|++++|++|++++.|+ .||++++||||+++
T Consensus 173 ~~~~~~~~i~~livdAv~~V~~~~-~G~~~~dl~-~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~-~m~~~ien~kIll~ 249 (553)
T 3ko1_A 173 AVAGAREYIADIVVKAVTQVAELR-GDKWYVDLD-NIQIVKKAGGSINDTQLVYGIVVDKEVVHP-GMPKRLENAKIALI 249 (553)
T ss_dssp SCCTTHHHHHHHHHHHHHHHCCCT-TSSCCCCGG-GEEEEECCCSCGGGCEEESEEEECSCBSCT-TSCSCCBSCEEEEE
T ss_pred hhhhHHHHHHHHHHHHHHHHHHhc-CCceEEech-hHHHHHHhCCccccceeeEEEEecccccCC-CCccccccceEEEe
Confidence 999999999999999999998632 354568886 599999999999999999999999999998 89999999999999
Q ss_pred ecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCHHHHHHHHHcCCeeeecCCHhHHH
Q 012157 242 DSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNN 321 (470)
Q Consensus 242 ~~~Le~~~~~~~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~vv~~v~~~~L~ 321 (470)
+++|++++++.++++.+++++++..+++.|++++++++++|++.|+||||++++|++.+++||.++||++++++++++|+
T Consensus 250 d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~gI~~v~~v~k~~le 329 (553)
T 3ko1_A 250 DASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKKGVLAVRRAKKSDLE 329 (553)
T ss_dssp CSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHHTCEEECCCCHHHHH
T ss_pred cCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhcchhhhhhhhhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCeeccCCCCCCCCccCCccceEEEEEECCeEEEEEEecCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHHHH
Q 012157 322 RIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNI 401 (470)
Q Consensus 322 ~ia~~tGa~i~s~~~~l~~~~lG~~~~~v~~~~~g~~~~~~~~~~~~~~~~TIll~g~t~~~l~e~~~~l~dal~~~~~~ 401 (470)
|||++|||++++++++++++++|+ |+.|++.++|+++|+||++|++++.+||+|||+|+.+++|.||+++||++++|++
T Consensus 330 ria~~tGa~ivs~l~~l~~~~LG~-a~~v~~~~ig~d~~~~i~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a 408 (553)
T 3ko1_A 330 KLARATGGRVVSNIDEISEQDLGY-ASLIEERKVGEDKMVFVEGAKNPKSISILIRGGLERLVDETERALRDALGTVADV 408 (553)
T ss_dssp HHHTTTTCCEESCGGGCCSSSSEE-CSEEECCCCSSSCCEEEESCSSSSCEEEEECCSSTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhCCeeecccccCChhhcch-HHHHHHhhcCcceEEEeccCCCCceEEEeeeccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEecCCHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHhhc
Q 012157 402 IKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGK 469 (470)
Q Consensus 402 ~~~~~vv~GGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~ 469 (470)
+++|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++++|++.
T Consensus 409 v~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~ 476 (553)
T 3ko1_A 409 IKDGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQLAVEAYANALESLVSILIENAGFDPIDLLMKLRST 476 (553)
T ss_dssp HHHCEEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHT
T ss_pred hhcCceecCCceeEeHHHHHHHHhccccCChhHhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHH
Confidence 99999999999999999999999998889999999999999999999999999999999999999863
No 4
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.6e-102 Score=811.78 Aligned_cols=454 Identities=31% Similarity=0.489 Sum_probs=437.4
Q ss_pred cccccchhHHHHHHHHHHHHHHHhhhcCCCCccceeeecCCCCEEEecChHHHHhhccccChhHHHHHHHHhhhcccccC
Q 012157 12 LKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGD 91 (470)
Q Consensus 12 ~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GD 91 (470)
+++++|.++|.+|+.||..++++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++||
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~e~GD 82 (529)
T 3iyg_A 3 GDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGD 82 (529)
T ss_pred cchhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCChHHHHHHHHHHHhhhhhCC
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhh-ccccCCCCCHHHHHHHHHHHhhcccccchHHHH
Q 012157 92 GTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDK-IAMPIDTNDRATMLGLVKSCIGTKFTSQFGDLI 170 (470)
Q Consensus 92 Gttt~vlL~~~ll~~~~~li~~gi~~~~I~~~~~~a~~~~~~~l~~-~~~~v~~~~~~~l~~v~~t~l~sk~~~~~~~~l 170 (470)
||||+++|+++||+++.+++++|+||..|++||+.|++.++++|++ +++|++..|++.|.++++|+++||+.++|+++|
T Consensus 83 GTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i 162 (529)
T 3iyg_A 83 GTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGINGDFF 162 (529)
T ss_pred ChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccccHHHH
Confidence 9999999999999999999999999999999999999999999998 999998777899999999999999999999999
Q ss_pred HHHHHHHHhhcccccCCCccccCcccceeEEEecCCCcCCcceeeeEEEecccCCCCCCcceecCCeEEEEecccccccc
Q 012157 171 ADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKG 250 (470)
Q Consensus 171 ~~l~~~a~~~~~~~~~~g~~~~~~~~~I~i~~~~G~~~~~s~li~Giv~~~~~~~~~~~~~~~~~~kIll~~~~Le~~~~ 250 (470)
++++++|+.+++...++|...+|++ +|+|++++|+++.||++++|++|++++.|+ .||+.++||||++++++|+++++
T Consensus 163 ~~livdAv~~V~~~~~~g~~~~dv~-~I~I~k~~G~~~~ds~lv~G~v~dk~~~~~-~m~~~ien~kIlll~~~le~~k~ 240 (529)
T 3iyg_A 163 ANLVVDAVLAIKYTDIRGQPRYPVN-SINVLKAHGRSQMESMLINGYALNCVVGSQ-GMPKRIVNAKIACLDFSLQKTKM 240 (529)
T ss_pred HHHHHHHHHHHhhhccCCCcccccc-eEEEEEecCCCccceEEEeeeEEecCcccc-cCCcccCCceEEEecCCcccccc
Confidence 9999999999974323454567776 599999999999999999999999999998 89999999999999999999999
Q ss_pred cccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCHHHHHHHHHcCCeeeecCCHhHHHHHHHHhCCe
Q 012157 251 ENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAV 330 (470)
Q Consensus 251 ~~~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~vv~~v~~~~L~~ia~~tGa~ 330 (470)
+.++++.+++++++..+.+.|++++++++++|++.|+||||++++|++.+++||.++||++++++++++|+|||++|||+
T Consensus 241 e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~gI~av~~v~k~~leria~~tGa~ 320 (529)
T 3iyg_A 241 KLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIAKASGAT 320 (529)
T ss_pred cCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCceeccCCHHHHHHHHHHhCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCC------CCccCCccceEEEEEECCeEEEEEEecCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHHHHhcC
Q 012157 331 IVNRPDELQ------ESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKN 404 (470)
Q Consensus 331 i~s~~~~l~------~~~lG~~~~~v~~~~~g~~~~~~~~~~~~~~~~TIll~g~t~~~l~e~~~~l~dal~~~~~~~~~ 404 (470)
+++++++++ ++++|+ |+.|++.++|+++|++|++|++++.|||+|||+|+.+++|.||+++||++++|+++++
T Consensus 321 iv~~~~~l~~~e~~~~~~LG~-a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~ 399 (529)
T 3iyg_A 321 VLSTLANLEGEETFEASMLGQ-AEEVVQERICDDELILIKNTKARTSASVILRGANDFMCDEMERSLHDALCVVKRVLES 399 (529)
T ss_pred eecchhcccchhccChhhCcc-ceEEEEEEeCCceEEEEEcCCCCceEEEEECCchHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999987764 578999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEecCCHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHhh
Q 012157 405 PKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQG 468 (470)
Q Consensus 405 ~~vv~GGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~ 468 (470)
|++|||||++|++||.+|++++.+.++++|+++++||+||+.||++|++|||+|+.+++++||+
T Consensus 400 ~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~ 463 (529)
T 3iyg_A 400 KSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRA 463 (529)
T ss_pred CeEEeCCcHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999986
No 5
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=7e-102 Score=807.97 Aligned_cols=455 Identities=64% Similarity=1.047 Sum_probs=439.8
Q ss_pred cccccchhHHHHHHHHHHHHHHHhhhcCCCCccceeeecCCCCEEEecChHHHHhhccccChhHHHHHHHHhhhcccccC
Q 012157 12 LKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGD 91 (470)
Q Consensus 12 ~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GD 91 (470)
+++++|.+++.+|+.||++++++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++||
T Consensus 2 ~~~~~g~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GD 81 (515)
T 3iyg_G 2 TKRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGD 81 (515)
T ss_pred CcccchHHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCCHHHHHHHHHHHHhhhhhCC
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHhhcccccchHHHHH
Q 012157 92 GTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGDLIA 171 (470)
Q Consensus 92 Gttt~vlL~~~ll~~~~~li~~gi~~~~I~~~~~~a~~~~~~~l~~~~~~v~~~~~~~l~~v~~t~l~sk~~~~~~~~l~ 171 (470)
||||+++|+++||+++.+++++|+||..|++||+.|++.++++|+++++|++..|++.|.++++|++++|..+.|.++++
T Consensus 82 GTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~~~~ 161 (515)
T 3iyg_G 82 GTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSNRDTMLNIINSSITTKVISRWSSLAC 161 (515)
T ss_pred ChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988788999999999999999999999999
Q ss_pred HHHHHHHhhcccccCCCccccCcccceeEEEecCCCcCCcceeeeEEEecccCCCCCCcceecCCeEEEEeccccccccc
Q 012157 172 DLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGE 251 (470)
Q Consensus 172 ~l~~~a~~~~~~~~~~g~~~~~~~~~I~i~~~~G~~~~~s~li~Giv~~~~~~~~~~~~~~~~~~kIll~~~~Le~~~~~ 251 (470)
+++++|+..+.++. ++..++|++++|+|++++|++++||++++|++|++++.|+ +||++++||||++++++|++++++
T Consensus 162 ~i~vdav~~V~~~~-~~~~~~dl~~~I~I~ki~Ggs~~ds~lv~G~v~dk~~~~~-~m~~~ien~kIll~~~~Le~~k~e 239 (515)
T 3iyg_G 162 NIALDAVKTVQFEE-NGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHP-RMRRYIKNPRIVLLDSSLEYKKGE 239 (515)
T ss_pred HHHHHHHHhccccc-CCCcccchhheeEEEEecCCCcccceEEeeEEEeCCCCCC-CCcceeeeeEEEEEcccccccccc
Confidence 99999999886432 2334577777799999999999999999999999999999 899999999999999999999999
Q ss_pred ccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCHHHHHHHHHcCCeeeecCCHhHHHHHHHHhCCee
Q 012157 252 NQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVI 331 (470)
Q Consensus 252 ~~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~vv~~v~~~~L~~ia~~tGa~i 331 (470)
.++++.+++++++..+++.|++++++++++|++.|++||+++++|++.+++||.++||++++++++++|+|||++|||++
T Consensus 240 ~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~~I~av~~~~k~~leria~~tGa~i 319 (515)
T 3iyg_G 240 SQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARACGARI 319 (515)
T ss_pred cCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHCCceeeccCCHHHHHHHHHHhCCee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCccCCccceEEEEEECCeEEEEEEecCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHHHHhcCCeEEecC
Q 012157 332 VNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGG 411 (470)
Q Consensus 332 ~s~~~~l~~~~lG~~~~~v~~~~~g~~~~~~~~~~~~~~~~TIll~g~t~~~l~e~~~~l~dal~~~~~~~~~~~vv~GG 411 (470)
++++++++++++|+.|+.|++.++|+++|+||++|++++.|||+|||+|+.+++|.||+++||++++|++++++++||||
T Consensus 320 i~~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ivpGG 399 (515)
T 3iyg_G 320 VSRPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGG 399 (515)
T ss_pred eccccccChhhcCCcccEEEEEEECCceEEEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCC
Confidence 99999999999996599999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHhh
Q 012157 412 GATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQG 468 (470)
Q Consensus 412 G~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~ 468 (470)
|++|++++.+|++++...++++|+++++||+||+.||++|++|||+|+.+++++||+
T Consensus 400 Ga~e~~~~~~L~~~~~~~~g~eq~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~ 456 (515)
T 3iyg_G 400 GASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRA 456 (515)
T ss_pred CHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999986
No 6
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=6.9e-102 Score=812.00 Aligned_cols=459 Identities=37% Similarity=0.642 Sum_probs=445.9
Q ss_pred CCCccccccccccccchhHHHHHHHHHHHHHHHhhhcCCCCccceeeecCCCCEEEecChHHHHhhccccChhHHHHHHH
Q 012157 2 HSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIEL 81 (470)
Q Consensus 2 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~ 81 (470)
+.| .+|++++++.+|.+++.+|+.||+.++++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++
T Consensus 3 ~~p-~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~ 81 (543)
T 3ruv_A 3 QQP-GVLPENMKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPAAKMLIEV 81 (543)
T ss_dssp -CC-CSSCSSEEEEETHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHHHHHHSCCCCHHHHHHHHH
T ss_pred CCC-eeecCCcchhccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHH
Confidence 357 8899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcccccCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHhhcc
Q 012157 82 SRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTK 161 (470)
Q Consensus 82 ~~~~~~~~GDGttt~vlL~~~ll~~~~~li~~gi~~~~I~~~~~~a~~~~~~~l~~~~~~v~~~~~~~l~~v~~t~l~sk 161 (470)
|++|++++||||||+++|+++||+++.+++++|+||..|++||+.|++.++++|+++++|++..|++.|.++++|+++||
T Consensus 82 a~~qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~L~~va~tsl~sK 161 (543)
T 3ruv_A 82 AKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEILTKIAMTSITGK 161 (543)
T ss_dssp HHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999999998778999999999999999
Q ss_pred cccchHHHHHHHHHHHHhhcccccCCCccccCcccceeEEEecCCCcCCcceeeeEEEecccCCCCCCcceecCCeEEEE
Q 012157 162 FTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILL 241 (470)
Q Consensus 162 ~~~~~~~~l~~l~~~a~~~~~~~~~~g~~~~~~~~~I~i~~~~G~~~~~s~li~Giv~~~~~~~~~~~~~~~~~~kIll~ 241 (470)
+.+.|+++|++++++|+.+++.+ +|. +|++ +|+|++.+|+++.+|++++|++|++++.|+ .||++++||||+++
T Consensus 162 ~~~~~~~~i~~livdAv~~V~~~--~g~--~dl~-~I~V~k~~Gg~~~ds~lv~G~v~dk~~~~~-~m~~~~~n~kIll~ 235 (543)
T 3ruv_A 162 GAEKAKEKLAEIIVEAVSAVVDD--EGK--VDKD-LIKIEKKSGASIDDTELIKGVLVDKERVSA-QMPKKVTDAKIALL 235 (543)
T ss_dssp CGGGCCHHHHHHHHHHHHHHCCT--TSC--CCGG-GEEEEEEECSCGGGCEEESSEEESCCCSCT-TSCSEEEEEEEEEE
T ss_pred ccchhHHHHHHHHHHHHHHhhcc--CCC--cccc-eEEEEEcCCCCcccceeecceEEeccccCc-cccccccCcEEEEE
Confidence 99999999999999999999852 243 7776 599999999999999999999999999998 89999999999999
Q ss_pred ecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCHHHHHHHHHcCCeeeecCCHhHHH
Q 012157 242 DSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNN 321 (470)
Q Consensus 242 ~~~Le~~~~~~~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~vv~~v~~~~L~ 321 (470)
+++|++++++.++++.+++++++..+++.|++++++++++|++.|+||||++++|++.+++||.++||++++++++++|+
T Consensus 236 ~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~gI~~v~~v~k~~le 315 (543)
T 3ruv_A 236 NCAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDME 315 (543)
T ss_dssp SSCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHH
T ss_pred cccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHcCcEEEeeCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCeeccCCCCCCCCccCCccceEEEEEECCeEEEEEEecCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHHHH
Q 012157 322 RIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNI 401 (470)
Q Consensus 322 ~ia~~tGa~i~s~~~~l~~~~lG~~~~~v~~~~~g~~~~~~~~~~~~~~~~TIll~g~t~~~l~e~~~~l~dal~~~~~~ 401 (470)
|||++|||++++++++++++++|+ |+.|++.++|+++|++|++|++++.+||+|||+|+.+++|.||+++||++++|++
T Consensus 316 ~ia~~tGa~iis~l~~l~~~~LG~-a~~v~~~~ig~~~~~~i~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a 394 (543)
T 3ruv_A 316 KLAKATGANVIAAIAALSAQDLGD-AGLVEERKISGDSMIFVEECKHPKAVTMLIRGTTEHVIEEVARAVDDAVGVVGCT 394 (543)
T ss_dssp HHHHHHCCCEESCGGGCCGGGCEE-EEEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCceecccccCCHHHCCc-ccEEEEEEeCCceEEEEECCCCCceeEEEecCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEecCCHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHhh
Q 012157 402 IKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQG 468 (470)
Q Consensus 402 ~~~~~vv~GGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~ 468 (470)
+++|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++++|++
T Consensus 395 v~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~ 461 (543)
T 3ruv_A 395 IEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRA 461 (543)
T ss_dssp HHHCEEEETTTHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HhcCCeecCCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 9999999999999999999999999889999999999999999999999999999999999999986
No 7
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=6.2e-102 Score=812.71 Aligned_cols=459 Identities=40% Similarity=0.651 Sum_probs=436.6
Q ss_pred CccccccccccccchhHHHHHHHHHHHHHHHhhhcCCCCccceeeecCCCCEEEecChHHHHhhccccChhHHHHHHHHh
Q 012157 4 PVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSR 83 (470)
Q Consensus 4 ~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~ 83 (470)
|+.++++++++.+|.+++.+|+.||.+++++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|+
T Consensus 7 ~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~ 86 (545)
T 1a6d_A 7 PILVLKEGTQREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPTAKMIVEVSK 86 (545)
T ss_dssp ----------CEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHHHHHSCCCSHHHHHHHGGGG
T ss_pred cccccCCcchhhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHHHHhhhccchHHHHHHHHHH
Confidence 67789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHhhcccc
Q 012157 84 TQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFT 163 (470)
Q Consensus 84 ~~~~~~GDGttt~vlL~~~ll~~~~~li~~gi~~~~I~~~~~~a~~~~~~~l~~~~~~v~~~~~~~l~~v~~t~l~sk~~ 163 (470)
+|++++||||||+++|+++||+++.+++++|+||..|++||+.|++.++++|+++++| + .|++.|.++++|+|+||+.
T Consensus 87 ~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~-~~~~~l~~va~tsl~sKi~ 164 (545)
T 1a6d_A 87 AQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-S-TDDATLRKIALTALSGKNT 164 (545)
T ss_dssp CTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-C-CCHHHHHHHHHHHTTTSSC
T ss_pred hcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-C-CCHHHHHHHHHHHHhcccc
Confidence 9999999999999999999999999999999999999999999999999999999999 7 6899999999999999999
Q ss_pred cchHHHHHHHHHHHHhhcccccCCCccccCcccceeEEEecCCCcCCcceeeeEEEecccCCCCCCcceecCCeEEEEec
Q 012157 164 SQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDS 243 (470)
Q Consensus 164 ~~~~~~l~~l~~~a~~~~~~~~~~g~~~~~~~~~I~i~~~~G~~~~~s~li~Giv~~~~~~~~~~~~~~~~~~kIll~~~ 243 (470)
++|+++|++++++|+.+++.+. .|...+|+. +|+|++++|++++||++++|++|++++.|+ .||++++||||+++++
T Consensus 165 ~~~~~~i~~livdAv~~v~~~~-~g~~~~d~~-~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~-~m~~~ien~kIll~~~ 241 (545)
T 1a6d_A 165 GLSNDFLADLVVKAVNAVAEVR-DGKTIVDTA-NIKVDKKNGGSVNDTQFISGIVIDKEKVHS-KMPDVVKNAKIALIDS 241 (545)
T ss_dssp CSTHHHHHHHHHHHHHHHCEES-SSSEECCGG-GEEEEECCCSCSTTCEEESEEEESCCCSCT-TSCSEEEEEEEEEECS
T ss_pred cccHHHHHHHHHHHHHHHhccc-CCCcccccc-eEEEEEecCCCceeeEEEeeEEEeccCCCC-CCcceecCCEEEEEec
Confidence 9999999999999999998532 233457775 699999999999999999999999999998 8999999999999999
Q ss_pred ccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCHHHHHHHHHcCCeeeecCCHhHHHHH
Q 012157 244 PLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRI 323 (470)
Q Consensus 244 ~Le~~~~~~~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~vv~~v~~~~L~~i 323 (470)
+|++++++.++++.++++++++.+.+.|++++++++++|++.|+||||++++|++.++++|.++||++++++++++|+||
T Consensus 242 ~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~i 321 (545)
T 1a6d_A 242 ALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKL 321 (545)
T ss_dssp CBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHTCEEECSCCHHHHHHH
T ss_pred CCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeeEeccCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCeeccCCCCCCCCccCCccceEEEEEECCeEEEEEEecCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHHHHhc
Q 012157 324 AKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIK 403 (470)
Q Consensus 324 a~~tGa~i~s~~~~l~~~~lG~~~~~v~~~~~g~~~~~~~~~~~~~~~~TIll~g~t~~~l~e~~~~l~dal~~~~~~~~ 403 (470)
|++|||++++++++++++++|+ |+.|++.++|+++|++|++|++++.+||+|||+|+.+++|.||+++||++++|++++
T Consensus 322 a~~tGa~iis~l~~~~~~~LG~-a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~ 400 (545)
T 1a6d_A 322 AKATGAKIVTDLDDLTPSVLGE-AETVEERKIGDDRMTFVMGCKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAITKE 400 (545)
T ss_dssp HHHHCCCEESSGGGCCGGGCEE-EEEEEEEEETTEEEEEEEEESCSSCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCeeecccccCCHHHCCC-ceEEEEEEecCceEEEEecCCCCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHhh
Q 012157 404 NPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQG 468 (470)
Q Consensus 404 ~~~vv~GGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~ 468 (470)
+|++|||||++|++|+.+|++++...++++|+++++|++||+.||++|++|||+|+.+++++||+
T Consensus 401 ~g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~ 465 (545)
T 1a6d_A 401 DGKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKA 465 (545)
T ss_dssp HCEEEETTTHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred CCCEEeCcCHHHHHHHHHHHHHhhccCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 99999999999999999999999888999999999999999999999999999999999999985
No 8
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.1e-100 Score=798.16 Aligned_cols=452 Identities=33% Similarity=0.562 Sum_probs=435.6
Q ss_pred ccccccccchhHHHHHHHHHHHHHHHhhhcCCCCccceeeecCCCCEEEecChHHHHhhccccChhHHHHHHHHhhhccc
Q 012157 9 KDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEE 88 (470)
Q Consensus 9 ~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~ 88 (470)
++++++++|.+++.+|+.||++++++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||++
T Consensus 1 ~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~ 80 (515)
T 3iyg_H 1 KEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAE 80 (515)
T ss_pred CCCccccCcHHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCCHHHHHHHHHHHHhhce
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccCCCCC----HHHHHHHHHHHhhccccc
Q 012157 89 VGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTND----RATMLGLVKSCIGTKFTS 164 (470)
Q Consensus 89 ~GDGttt~vlL~~~ll~~~~~li~~gi~~~~I~~~~~~a~~~~~~~l~~~~~~v~~~~----~~~l~~v~~t~l~sk~~~ 164 (470)
+||||||+++|+++||+++.+++++|+||..|++||+.|++.++++|+++++|++..| ++.|.++++|+++||+.+
T Consensus 81 ~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s 160 (515)
T 3iyg_H 81 VGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLIS 160 (515)
T ss_pred eCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCccc
Confidence 9999999999999999999999999999999999999999999999999999997545 677899999999999999
Q ss_pred chHHHHHHHHHHHHhhcccccCCCccccCcccceeEEEecCCCcCCcceeeeEEEecccCCCC--CCcceecCCeEEEEe
Q 012157 165 QFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPG--KMRRKIVNPRIILLD 242 (470)
Q Consensus 165 ~~~~~l~~l~~~a~~~~~~~~~~g~~~~~~~~~I~i~~~~G~~~~~s~li~Giv~~~~~~~~~--~~~~~~~~~kIll~~ 242 (470)
.|+++|++++++|+.+++. ++|+. +|+|++++|+++.+|++++|++|++++.||+ +||++++||||++++
T Consensus 161 ~~~~~i~~livdAv~~V~~-------~~d~~-~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~p~~~~~p~~~en~kIll~~ 232 (515)
T 3iyg_H 161 QQKAFFAKMVVDAVMMLDD-------LLQLK-MIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYHNPMIALLN 232 (515)
T ss_pred ccHHHHHHHHHHHHHHhcc-------cCCcc-eEEEEecCCCCccceEEEeeeEEecCccCcccccCCccccccEEEEEc
Confidence 9999999999999999962 35554 6999999999999999999999999999973 358999999999999
Q ss_pred cccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCHHHHHHHHHcCCeeeecCCHhHHHH
Q 012157 243 SPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNR 322 (470)
Q Consensus 243 ~~Le~~~~~~~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~vv~~v~~~~L~~ 322 (470)
++|++++++.++++.+++++++..+.+.|++++++++++|++.|+|||+++++|++.+++||.++||++++++++.+|+|
T Consensus 233 ~~Le~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~gI~~v~~~~k~~ler 312 (515)
T 3iyg_H 233 VELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKR 312 (515)
T ss_pred ccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHcCCcccccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCeeccCCCCCCCCccCCccceEEEEEECCeEEEEEEecCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHHHHh
Q 012157 323 IAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNII 402 (470)
Q Consensus 323 ia~~tGa~i~s~~~~l~~~~lG~~~~~v~~~~~g~~~~~~~~~~~~~~~~TIll~g~t~~~l~e~~~~l~dal~~~~~~~ 402 (470)
||++|||++++++++++++++|+ |+.|++.++|+++|++|++|++++.+||+|||+|+.+++|.||+++||++++|+++
T Consensus 313 ia~~tGa~ii~~l~~~~~~~LG~-a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v 391 (515)
T 3iyg_H 313 TMMACGGSIQTSVNALSSDVLGR-CQVFEETQIGGERYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAI 391 (515)
T ss_pred HHHHhCCEEeeccccCCHHHCCc-ccEEEEEEEcCeEEEEEecCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEecCCHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHhhc
Q 012157 403 KNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGK 469 (470)
Q Consensus 403 ~~~~vv~GGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~ 469 (470)
+++++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++++|++.
T Consensus 392 ~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~ 458 (515)
T 3iyg_H 392 KNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRAR 458 (515)
T ss_pred hCCCeecCCcHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 9988999999999999999999999999999999999999999999999999999999999999863
No 9
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=1.8e-101 Score=810.34 Aligned_cols=467 Identities=58% Similarity=0.969 Sum_probs=438.4
Q ss_pred CCCCccccccccccccchhHHHHHHHHHHHHHHHhhhcCCCCccceeeecCCCCEEEecChHHHHhhccccChhHHHHHH
Q 012157 1 MHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIE 80 (470)
Q Consensus 1 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~ 80 (470)
|+.|+.++++++++.+|.+++.+|+.||..++++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|+++
T Consensus 1 ~~~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~~~hP~Akll~e 80 (590)
T 3p9d_C 1 MQAPVVFMNASQERTTGRQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPAAKSMLE 80 (590)
T ss_dssp -----CCSCTTCCBCTTHHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCHHHHHHHSCCCCHHHHTHHH
T ss_pred CCCCeEeecCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCHHHHHHHhhCCCHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcccccCChhHHHHHHHHHHHHHHHH-HhcCCChHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHhh
Q 012157 81 LSRTQDEEVGDGTTSVIVLAGEMLHVAEEF-IDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIG 159 (470)
Q Consensus 81 ~~~~~~~~~GDGttt~vlL~~~ll~~~~~l-i~~gi~~~~I~~~~~~a~~~~~~~l~~~~~~v~~~~~~~l~~v~~t~l~ 159 (470)
+|++|++++||||||+++|+++||+++.++ +++|+||..|++||+.|++.++++|+++++|++..|++.|.++++|+|+
T Consensus 81 ~a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~L~~vA~tsls 160 (590)
T 3p9d_C 81 LSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVENDAAMKKLIQASIG 160 (590)
T ss_dssp HTTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCCTHHHHHHHTTTST
T ss_pred HHHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHh
Confidence 999999999999999999999999999999 9999999999999999999999999999999987778899999999999
Q ss_pred cccccchHHHHHHHHHHHHhhcccccCCCc-----cccCcccceeEEEecCCCcCCcceeeeEEEecccCCCCCCcceec
Q 012157 160 TKFTSQFGDLIADLAIDATTTVGVDLGQGL-----REVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIV 234 (470)
Q Consensus 160 sk~~~~~~~~l~~l~~~a~~~~~~~~~~g~-----~~~~~~~~I~i~~~~G~~~~~s~li~Giv~~~~~~~~~~~~~~~~ 234 (470)
+|+.++|+++|++++++|+.+++.+...+. .++|++++|+|++++|+++.||++++|++|++++.++ +||++++
T Consensus 161 SK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds~lv~Gmvfdk~~~~~-~m~~~~e 239 (590)
T 3p9d_C 161 TKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKDVVHP-KMSRHIE 239 (590)
T ss_dssp TSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGCBCCSSEEECCCCSCT-TSCSCEE
T ss_pred cccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccceeeeEEEEecccCCC-CCcceee
Confidence 999999999999999999999986321111 1467766899999999999999999999999999998 8999999
Q ss_pred CCeEEEEecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCHHHHHHHHHcCCeeeec
Q 012157 235 NPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRR 314 (470)
Q Consensus 235 ~~kIll~~~~Le~~~~~~~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~vv~~ 314 (470)
||||++++++|++++++.++++.+++++++..+++.|++++++++++|++.|++|||++++|++.+++||.++||++|++
T Consensus 240 n~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~I~av~~ 319 (590)
T 3p9d_C 240 NPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGGCSVLRR 319 (590)
T ss_dssp SCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTTCCCCCC
T ss_pred eeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhccceeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHhHHHHHHHHhCCeeccCCCCCCCCccCCccceEEEEEECCeEEEEEEecCCCCe-----------------------
Q 012157 315 LRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKA----------------------- 371 (470)
Q Consensus 315 v~~~~L~~ia~~tGa~i~s~~~~l~~~~lG~~~~~v~~~~~g~~~~~~~~~~~~~~~----------------------- 371 (470)
+++.+|+|||++|||++++++++++++++|+.|+.|++..+|+++|++|++|+++..
T Consensus 320 ~~k~~le~ia~~TGa~iis~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 399 (590)
T 3p9d_C 320 VKKSDNNRIARVTGATIVNRVEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFI 399 (590)
T ss_dssp CCHHHHHHHHHHHTCCCCSCSTTCCTTSCBCCCSEEECCEETTEECEEECC-----------------------------
T ss_pred CCHHHHHHHHHHhCCceeecccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCccccccccccccccccchhhhhcchh
Confidence 999999999999999999999999999999559999999999999999999877666
Q ss_pred ---------------------------------EEEEeccCCHHHHHHHHHHHHHHHHHHHHHhcCCeEEecCCHHHHHH
Q 012157 372 ---------------------------------CTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTV 418 (470)
Q Consensus 372 ---------------------------------~TIll~g~t~~~l~e~~~~l~dal~~~~~~~~~~~vv~GGG~~E~~l 418 (470)
+||+|||+|+.+++|.||+++||++++|+++++|++|||||++|+++
T Consensus 400 ~~~i~~r~~~i~~~~~~~~~~~~~~~~~l~ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~ 479 (590)
T 3p9d_C 400 AVSAANRFKKISSSGALGSGHHHHHHHHGSGKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAV 479 (590)
T ss_dssp ----------------------------CCCSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHH
T ss_pred hHHHHHHHHHHHHHHhccCCHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHH
Confidence 99999999999999999999999999999999988999999999999
Q ss_pred HHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHhh
Q 012157 419 SATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQG 468 (470)
Q Consensus 419 ~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~ 468 (470)
+.+|++++...++++|+++++|++||+.||++|++|||+|+.+++++|++
T Consensus 480 s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~ 529 (590)
T 3p9d_C 480 SVKLAEKAKQLEGIQQWPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRA 529 (590)
T ss_dssp HHHHHHHHHHSCSTTHHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred HHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 99999998888999999999999999999999999999999999999986
No 10
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=9.5e-101 Score=805.10 Aligned_cols=459 Identities=30% Similarity=0.471 Sum_probs=440.5
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHhhhcCCCCccceeeecCCCCEEEecChHHHHhhccccChhHHHHHHHHhhhc
Q 012157 7 VLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQD 86 (470)
Q Consensus 7 ~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~ 86 (470)
-|+++.++.+|.++|.+|+.||..++++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|+
T Consensus 12 ~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd 91 (559)
T 3p9d_A 12 TLFLGGEKISGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPAGKILVELAQQQD 91 (559)
T ss_dssp SCCSSCEEEETHHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCSHHHHHHHHHHHHHH
T ss_pred hhhccccccchHHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 36888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhh-ccccCCCCCHHHHHHHHHHHhhcccccc
Q 012157 87 EEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDK-IAMPIDTNDRATMLGLVKSCIGTKFTSQ 165 (470)
Q Consensus 87 ~~~GDGttt~vlL~~~ll~~~~~li~~gi~~~~I~~~~~~a~~~~~~~l~~-~~~~v~~~~~~~l~~v~~t~l~sk~~~~ 165 (470)
+++||||||+++|+++||+++.+++++|+||..|++||+.|++.++++|++ +++|++..|++.|.++++|+++||+.++
T Consensus 92 ~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~~~ 171 (559)
T 3p9d_A 92 REIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKIIGA 171 (559)
T ss_dssp HHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC--CTTHHHHHHHTTSSSGGGT
T ss_pred HHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccc
Confidence 999999999999999999999999999999999999999999999999999 9999987667889999999999999999
Q ss_pred hHHHHHHHHHHHHhhcccccCCCccccCcccceeEEEecCCCcCCcceeeeEEEecccCCCCCCcceec--CCeEEEEec
Q 012157 166 FGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIV--NPRIILLDS 243 (470)
Q Consensus 166 ~~~~l~~l~~~a~~~~~~~~~~g~~~~~~~~~I~i~~~~G~~~~~s~li~Giv~~~~~~~~~~~~~~~~--~~kIll~~~ 243 (470)
|+++|++++++|+.++++...++...+|++ +|+|++++|+++++|++++|++|++++.|+ .||++++ ||||+++++
T Consensus 172 ~~~~i~~livdAv~~V~~~~~~~~~~i~l~-~I~I~k~~Ggs~~ds~lv~G~v~dk~~~~~-~m~~~ie~~n~kIll~~~ 249 (559)
T 3p9d_A 172 DSDFFSNMVVDALLAVKTQNSKGEIKYPVK-AVNVLKAHGKSATESLLVPGYALNCTVASQ-AMPKRIAGGNVKIACLDL 249 (559)
T ss_dssp THHHHHHHHHHHHHHHCCEESSSCEECCTT-CCCEEEEESSCSSCCBCCSEECCCCCCSST-TSCSEECSSSBCEEEETT
T ss_pred hhHHHHHHHHHHHHHhcccccCCCCccchh-HeEEEEecCCCccceeEeccEEEeecccCC-CcceeeccCCceEEEEec
Confidence 999999999999999984111222357776 499999999999999999999999999999 8999999 999999999
Q ss_pred ccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCHHHHHHHHHcCCeeeecCCHhHHHHH
Q 012157 244 PLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRI 323 (470)
Q Consensus 244 ~Le~~~~~~~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~vv~~v~~~~L~~i 323 (470)
+|++++++.++++.+++++++..+.+.|++++++++++|++.|+||||++++|++.+++||.++||++++++++.+|+||
T Consensus 250 ~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~I~av~~~~k~~le~i 329 (559)
T 3p9d_A 250 NLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAKIMGVRRCKKEDLRRI 329 (559)
T ss_dssp CCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTTCEEESSCCHHHHHHH
T ss_pred cccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcCCceEccCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCeeccCC------CCCCCCccCCccceEEEEEECCeEEEEEEecCCCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 012157 324 AKACGAVIVNRP------DELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSV 397 (470)
Q Consensus 324 a~~tGa~i~s~~------~~l~~~~lG~~~~~v~~~~~g~~~~~~~~~~~~~~~~TIll~g~t~~~l~e~~~~l~dal~~ 397 (470)
|++|||++++++ ++++++++|+ |+.|++.++++++|++|++|++++.|||+|||+|+.+++|.||+++||+++
T Consensus 330 a~~TGa~iis~~~~l~~~e~~~~~~LG~-a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAL~~ 408 (559)
T 3p9d_A 330 ARATGATLVSSMSNLEGEETFESSYLGL-CDEVVQAKFSDDECILIKGTSKHSSSSIILRGANDYSLDEMERSLHDSLSV 408 (559)
T ss_dssp HHHSSCCCBCCSCCSTTCCCCCTTTSCC-EEEEEEEECSSCEEECEEEESSSCCCCEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCEEEeccccccccccCCHhHCcc-ceEEEEEEEcCceEEEEEcCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHH
Confidence 999999999998 7889999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCeEEecCCHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHhh
Q 012157 398 ARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQG 468 (470)
Q Consensus 398 ~~~~~~~~~vv~GGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~ 468 (470)
+|+++++|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++++|++
T Consensus 409 ~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~ 479 (559)
T 3p9d_A 409 VKRTLESGNVVPGGGCVEAALNIYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRS 479 (559)
T ss_dssp HHHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHH
T ss_pred HHHHhhcCCEEeCccHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999989999999999999999999999999999999999999986
No 11
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=8.6e-100 Score=791.89 Aligned_cols=448 Identities=28% Similarity=0.440 Sum_probs=432.9
Q ss_pred ccccccchhHHHHHHHHHHHHHHHhhhcCCCCccceeeecCC--CCEEEecChHHHHhhccccChhHHHHHHHHhhhccc
Q 012157 11 SLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDAS--GGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEE 88 (470)
Q Consensus 11 ~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~kli~~~~--g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~ 88 (470)
++++++|.++|.+|+.||+.++++|++||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++||++
T Consensus 2 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp~Akll~e~a~~qd~e 81 (513)
T 3iyg_B 2 GADEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDE 81 (513)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCHHHHHHHHHHHHhhhh
Confidence 357889999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccCCCC---CHHHHHHHHHHHhhcccccc
Q 012157 89 VGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTN---DRATMLGLVKSCIGTKFTSQ 165 (470)
Q Consensus 89 ~GDGttt~vlL~~~ll~~~~~li~~gi~~~~I~~~~~~a~~~~~~~l~~~~~~v~~~---~~~~l~~v~~t~l~sk~~~~ 165 (470)
+||||||+++|+++||+++.+++++|+||..|++||+.|++.++++|+++++|++.+ +++.|.++++|++++|+.++
T Consensus 82 ~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslssK~~~~ 161 (513)
T 3iyg_B 82 VGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTH 161 (513)
T ss_pred hCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhccccccc
Confidence 999999999999999999999999999999999999999999999999999998742 57899999999999999999
Q ss_pred hHHHHHHHHHHHHhhcccccCCCccccCcccceeEEEecCCCcCCcceeeeEEEecccCCCCCCcceecCCeEEEEeccc
Q 012157 166 FGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPL 245 (470)
Q Consensus 166 ~~~~l~~l~~~a~~~~~~~~~~g~~~~~~~~~I~i~~~~G~~~~~s~li~Giv~~~~~~~~~~~~~~~~~~kIll~~~~L 245 (470)
|+++|++++++|+.+++.+ +|+. +|+|++++|+++.||++++|++|++++.++ ||++++||||++++++|
T Consensus 162 ~~~~i~~livdAv~~V~~~-------~d~~-~I~V~ki~gg~~~ds~lv~G~v~dk~~~~~--m~~~~en~kIll~~~~L 231 (513)
T 3iyg_B 162 HKDHFTKLAVEAVLRLKGS-------GNLE-AIHVIKKLGGSLADSYLDEGFLLDKKIGVN--QPKRIENAKILIANTGM 231 (513)
T ss_pred chHHHHHHHHHHHHHhccc-------CCcC-eEEEEEeCCCCccceeEEeeEEEeccccCC--CceeecCceEEEEcCCc
Confidence 9999999999999999742 4554 699999999999999999999999999986 99999999999999999
Q ss_pred cccccc-ccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCHHHHHHHHHcCCeeeecCCHhHHHHHH
Q 012157 246 EYKKGE-NQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIA 324 (470)
Q Consensus 246 e~~~~~-~~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~vv~~v~~~~L~~ia 324 (470)
++++++ .++++.+++++++..+.+.|++++++++++|++.|+||||++++|++.+++||.++||++++++++.+|+|||
T Consensus 232 e~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~~I~av~~~~~~~le~ia 311 (513)
T 3iyg_B 232 DTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFVGVERLA 311 (513)
T ss_pred ccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHcCceEEecCCHHHHHHHH
Confidence 999999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeeccCCCCCCCCccCCccceEEEEEECCeEEEEEEecCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHHHHhcC
Q 012157 325 KACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKN 404 (470)
Q Consensus 325 ~~tGa~i~s~~~~l~~~~lG~~~~~v~~~~~g~~~~~~~~~~~~~~~~TIll~g~t~~~l~e~~~~l~dal~~~~~~~~~ 404 (470)
++|||++++++++++++++|+ |+.|++..+|+++|++|++|++++.|||+|||+|+.+++|.||+++||++++|+++++
T Consensus 312 ~~tGa~ii~~l~~l~~~~LG~-a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~ 390 (513)
T 3iyg_B 312 LVTGGEIASTFDHPELVKLGS-CKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKD 390 (513)
T ss_pred HHhCCEEecccccCCHhHCCc-ccEEEEEEECCeEEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEecCCHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHhhc
Q 012157 405 PKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGK 469 (470)
Q Consensus 405 ~~vv~GGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~ 469 (470)
+++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++++|++.
T Consensus 391 ~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~ 455 (513)
T 3iyg_B 391 SRTVYGGGCSEMLMAHAVTQLASRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAA 455 (513)
T ss_pred CcEEeCCcHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 88999999999999999999998899999999999999999999999999999999999999863
No 12
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=1.5e-101 Score=809.67 Aligned_cols=460 Identities=32% Similarity=0.556 Sum_probs=435.0
Q ss_pred CCCCccccccccccccchhHHHHHHHHHHHHHHHhhhcCCCCccceeeecCCCCEEEecChHHHHhhccccChhHHHHHH
Q 012157 1 MHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIE 80 (470)
Q Consensus 1 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~ 80 (470)
|+.|+.+|++++++.+|.+++.+|+.||++++++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|+++
T Consensus 6 ~~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~Akll~e 85 (550)
T 3p9d_G 6 QTPTIVVLKEGTDASQGKGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPAAKTLVD 85 (550)
T ss_dssp ----------CCCEEESHHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSSSCEEEECCHHHHTTTSCCCSHHHHHHHH
T ss_pred CCcchhhhcCCcchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCCCCeEEECCHHHHHHHccCCCHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcccccCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccCCCCC---HHHHHHHHHHH
Q 012157 81 LSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTND---RATMLGLVKSC 157 (470)
Q Consensus 81 ~~~~~~~~~GDGttt~vlL~~~ll~~~~~li~~gi~~~~I~~~~~~a~~~~~~~l~~~~~~v~~~~---~~~l~~v~~t~ 157 (470)
+|++||+++||||||+++||++||+++.+++++|+||..|++||+.|++.++++|+++++|++..| ++.|.++++|+
T Consensus 86 ~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~L~~vA~ts 165 (550)
T 3p9d_G 86 ISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSGRELLERCARTA 165 (550)
T ss_dssp HHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC------CHHHHHHHH
T ss_pred HHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999998656 78899999999
Q ss_pred hhcccccchHHHHHHHHHHHHhhcccccCCCccccCcccceeEEEecCCCcCCcceeeeEEEecccCCCC--CCcceecC
Q 012157 158 IGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPG--KMRRKIVN 235 (470)
Q Consensus 158 l~sk~~~~~~~~l~~l~~~a~~~~~~~~~~g~~~~~~~~~I~i~~~~G~~~~~s~li~Giv~~~~~~~~~--~~~~~~~~ 235 (470)
++||+.+.|+++|++++++|+.++++ .++|++ +|+|++++|++++||++++|++|++++.|+. +||+.++|
T Consensus 166 l~sK~~~~~~~~i~~livdAv~~V~~------~~~dl~-~I~Vikv~Gg~~~ds~lv~G~~~dk~~~s~yf~~~~~~~en 238 (550)
T 3p9d_G 166 MSSKLIHNNADFFVKMCVDAVLSLDR------NDLDDK-LIGIKKIPGGAMEESLFINGVAFKKTFSYAGFEQQPKKFNN 238 (550)
T ss_dssp HHHTTTGGGHHHHHHHHHHHHHHCCS------SSCCGG-GCCCCBCCSSCGGGCCCCSSEEECCCSSCTTCSCSCSCCSS
T ss_pred ccCccccccHhHHHHHHHHHHHHhCc------cccCch-heeEEEecCCCccceeEEeeEEEeccccccccccCcccccC
Confidence 99999999999999999999999973 246775 6999999999999999999999999999862 68999999
Q ss_pred CeEEEEecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCHHHHHHHHHcCCeeeecC
Q 012157 236 PRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRL 315 (470)
Q Consensus 236 ~kIll~~~~Le~~~~~~~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~vv~~v 315 (470)
|||++++++|++++++.++++.+++++++..+++.|++++++++++|++.|++||+++++|++.+++||.++||++++++
T Consensus 239 ~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~gI~~v~~v 318 (550)
T 3p9d_G 239 PKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADRNIFCAGRV 318 (550)
T ss_dssp CCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGGTCEEEECC
T ss_pred ceEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHcCCccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHhHHHHHHHHhCCeeccCCCCCCCCccCCccceEEEEEECCeEEEEEEecCCCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 012157 316 RKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAM 395 (470)
Q Consensus 316 ~~~~L~~ia~~tGa~i~s~~~~l~~~~lG~~~~~v~~~~~g~~~~~~~~~~~~~~~~TIll~g~t~~~l~e~~~~l~dal 395 (470)
++++|+|||++|||++++++++++++++|+ |+.|++.++|+++|++|++|++++.|||+|||+|+.+++|.||+++||+
T Consensus 319 ~k~~lerIa~~tGa~iis~l~~l~~~~LG~-a~~v~~~~ig~e~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAl 397 (550)
T 3p9d_G 319 SADDMNRVIQAVGGSIQSTTSDIKPEHLGT-CALFEEMQIGSERYNLFQGCPQAKTCTLLLRGGAEQVIAEVERSLHDAI 397 (550)
T ss_dssp CTTHHHHHHHHTCCCCBSSGGGCCGGGCCC-CSBCCCCCCSSSCCEEEBCCTTCCCCCCCBCSSSHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCceecchhhCCHHHcCC-ceEEEEEEeCCeEEEEEecCCCCceeEEEEeCCcHHHHHHHHHHHHhHH
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCeEEecCCHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHhh
Q 012157 396 SVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQG 468 (470)
Q Consensus 396 ~~~~~~~~~~~vv~GGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~ 468 (470)
+++|+++++|++|||||++|++++.+|++++...++++|+++++|++||+.||++|++|||+|+.+++++|++
T Consensus 398 ~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~ 470 (550)
T 3p9d_G 398 MIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRL 470 (550)
T ss_dssp HHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHH
T ss_pred HHHHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999889999999999999999999999999999999999999986
No 13
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=1.1e-100 Score=800.54 Aligned_cols=464 Identities=30% Similarity=0.533 Sum_probs=441.3
Q ss_pred CCCCccccccccccccchhHHHHHHHHHHHHHHHhhhcCCCCccceeeecCCCCEEEecChHHHHhhccccChhHHHHHH
Q 012157 1 MHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIE 80 (470)
Q Consensus 1 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~ 80 (470)
|+.+..-++.+.++.+|.++|..|+.||+.++++|++||||+||+|||+++.|+++|||||+|||++|+++||+++|+++
T Consensus 1 ~~~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e 80 (528)
T 3p9d_D 1 MSAKVPSNATFKNKEKPQEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVARMLVE 80 (528)
T ss_dssp ------CCCSSCBCCCHHHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCCTTHHHHHH
T ss_pred CCCCcccccccchhcchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCCHHHHHHHH
Confidence 55555556777789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcccccCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHhhc
Q 012157 81 LSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGT 160 (470)
Q Consensus 81 ~~~~~~~~~GDGttt~vlL~~~ll~~~~~li~~gi~~~~I~~~~~~a~~~~~~~l~~~~~~v~~~~~~~l~~v~~t~l~s 160 (470)
+|++||+++||||||+++|+++||+++.+++++|+||..|++||+.|++.++++|+++++|++..|++.|.++++|+++|
T Consensus 81 ~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~l~~va~tsl~s 160 (528)
T 3p9d_D 81 VSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSDREQLVRAASTSLSS 160 (528)
T ss_dssp HHHHHHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCHHHHHHHHHHHSCS
T ss_pred HHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999877899999999999999
Q ss_pred ccccchHHHHHHHHHHHHhhcccccCCCccccCcccceeEEEecCCCcCCcceeeeEEEecccCCCCCCcceecCCeEEE
Q 012157 161 KFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIIL 240 (470)
Q Consensus 161 k~~~~~~~~l~~l~~~a~~~~~~~~~~g~~~~~~~~~I~i~~~~G~~~~~s~li~Giv~~~~~~~~~~~~~~~~~~kIll 240 (470)
|+.++|+++|++++++|+.+++... ++ .+|++ +|+|++++|++++||++++|++|++++.|+..||++++||||++
T Consensus 161 K~~~~~~~~i~~livdAv~~V~~~~-~~--~i~v~-~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~~m~~~ien~kIll 236 (528)
T 3p9d_D 161 KIVSQYSSFLAPLAVDSVLKISDEN-SK--NVDLN-DIRLVKKVGGTIDDTEMIDGVVLTQTAIKSAGGPTRKEKAKIGL 236 (528)
T ss_dssp SSCSTTHHHHHHHHHHHHHTTCCTT-TT--CCCGG-GSBCCCCCSSCSCCCEEESSCBCCCCCCCSSSCCSEESSEEEEE
T ss_pred CccchhHHHHHHHHHHHHHHhcccc-CC--ccceE-EEEEEEecCCCccceEEEeeeEEeecccCcccCcccccCceEEE
Confidence 9999999999999999999998521 22 47776 59999999999999999999999999999833999999999999
Q ss_pred EecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCC-----CHHHHHHHHHcCCeeeecC
Q 012157 241 LDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGL-----SDLACHYLSKAGVSAIRRL 315 (470)
Q Consensus 241 ~~~~Le~~~~~~~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~~~~~lIi~~~~i-----~~~~l~~l~~~~I~vv~~v 315 (470)
++++|++++++.++++.++++++++.+.+.|+++++++++++++.|+||||++++| ++.+++||.++||++++++
T Consensus 237 ~~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~I~av~~~ 316 (528)
T 3p9d_D 237 IQFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLNIMVVKDI 316 (528)
T ss_dssp ECCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTTSCCEEECC
T ss_pred EeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHcCcEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred CHhHHHHHHHHhCCeeccCCCCCCCCccCCccceEEEEEECCeEEEEEEecC--C-CCeEEEEeccCCHHHHHHHHHHHH
Q 012157 316 RKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCK--D-PKACTVLLRGASKDLLNEVERNLQ 392 (470)
Q Consensus 316 ~~~~L~~ia~~tGa~i~s~~~~l~~~~lG~~~~~v~~~~~g~~~~~~~~~~~--~-~~~~TIll~g~t~~~l~e~~~~l~ 392 (470)
++.+|+|||++|||++++++++++++++|+ |+.|++.++|+++|++|++|+ + ++.+||+|||+|+.+++|.||+++
T Consensus 317 ~k~~le~ia~~tGa~ii~~~~~l~~~~LG~-a~~v~~~~ig~~~~~~i~g~~~~~~~~~~tI~lrG~te~~l~E~kr~i~ 395 (528)
T 3p9d_D 317 EREEIEFLSKGLGCKPIADIELFTEDRLDS-ADLVEEIDSDGSKIVRVTGIRNNNARPTVSVVIRGANNMIIDETERSLH 395 (528)
T ss_dssp CTHHHHHHHHHHTCCCCSCSTTCCSSSEEE-ESCEECCEETTEECCBCTTBCCGGGCCCCEEECCCSSTTHHHHHHHHHT
T ss_pred CHHHHHHHHHHHCCEEecccccCCHHHCCc-ccEEEEEEECCEEEEEEEcccccCCCceEEEEEcCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999 999999999999999999998 6 899999999999999999999999
Q ss_pred HHHHHHHHHhcCCeEEecCCHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHhhc
Q 012157 393 DAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGK 469 (470)
Q Consensus 393 dal~~~~~~~~~~~vv~GGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~ 469 (470)
||++++|+++++|++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++++|++.
T Consensus 396 DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~ 472 (528)
T 3p9d_D 396 DALCVIRCLVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSK 472 (528)
T ss_dssp TTHHHHHHHHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHHHTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999988889999999999999999999999999999999999999863
No 14
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.1e-99 Score=787.91 Aligned_cols=452 Identities=36% Similarity=0.581 Sum_probs=435.1
Q ss_pred ccccccchhHHHHHHHHHHHHHHHhhhcCCCCccceeeecCCCCEEEecChHHHHhhccccChhHHHHHHHHhhhccccc
Q 012157 11 SLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVG 90 (470)
Q Consensus 11 ~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~~G 90 (470)
.+++.+|.+++..|+.||+.++++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++|
T Consensus 2 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~hP~Akll~~~a~~qd~~~G 81 (515)
T 3iyg_E 2 RKSRLMGLEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIG 81 (515)
T ss_pred cchhhchHHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCCHHHHHHHHHHHHhhhhhC
Confidence 35688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccCCC--CCHHHHHHHHHHHhhcccccchHH
Q 012157 91 DGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDT--NDRATMLGLVKSCIGTKFTSQFGD 168 (470)
Q Consensus 91 DGttt~vlL~~~ll~~~~~li~~gi~~~~I~~~~~~a~~~~~~~l~~~~~~v~~--~~~~~l~~v~~t~l~sk~~~~~~~ 168 (470)
|||||+++|+++||+++.+++++|+||..|++||+.|++.++++|+++++|++. .|++.|.++++|++++|+.+.|.+
T Consensus 82 DGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i~~~~~ 161 (515)
T 3iyg_E 82 DGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLGSKVVNSCHR 161 (515)
T ss_pred CchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCccCHHHHHHHHHHHhcccchhHHHH
Confidence 999999999999999999999999999999999999999999999999999854 467899999999999999888999
Q ss_pred HHHHHHHHHHhhcccccCCCccccCcccceeEEEecCCCcCCcceeeeEEEecccCCCCCCcceecCCeEEEEecccccc
Q 012157 169 LIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYK 248 (470)
Q Consensus 169 ~l~~l~~~a~~~~~~~~~~g~~~~~~~~~I~i~~~~G~~~~~s~li~Giv~~~~~~~~~~~~~~~~~~kIll~~~~Le~~ 248 (470)
+|++++++|+..+... ...++|++ +|+|++++|+++.+|++++|++|++++.|+ .||+..+||+|++++++|+++
T Consensus 162 ~l~~l~~dav~~V~~~---~~~~~d~~-~I~I~k~~Ggs~~ds~lv~G~~~dk~~~~~-~m~~~~~~~kIall~~~le~~ 236 (515)
T 3iyg_E 162 QMAEIAVNAVLTVADM---QRRDVDFE-LIKVEGKVGGRLEDTKLIKGVIVDKDFSHP-QMPKQVEDAKIAILTCPFEPP 236 (515)
T ss_pred HHHHHHHHHHHhhccc---ccCCCCcc-cEEEEEecCCCcccceEEeeEEEecccccc-cccccCCCceEEEEcCccccc
Confidence 9999999999998642 12346665 699999999999999999999999999998 899999999999999999999
Q ss_pred cccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCHHHHHHHHHcCCeeeecCCHhHHHHHHHHhC
Q 012157 249 KGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACG 328 (470)
Q Consensus 249 ~~~~~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~vv~~v~~~~L~~ia~~tG 328 (470)
+++.++++.+++++++..+.+.|+++++++++++++.|+||||++++|++.++++|.++||++++++++.+|+|||++||
T Consensus 237 k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I~~v~~v~k~~le~ia~~tG 316 (515)
T 3iyg_E 237 KPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDLPAVRWVGGPEIELIAIATG 316 (515)
T ss_pred cccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCCEEEeccCHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeccCCCCCCCCccCCccceEEEEEECC--eEEEEEEecCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHHHHhcCCe
Q 012157 329 AVIVNRPDELQESDVGTGAGLFEVKKIGD--EFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPK 406 (470)
Q Consensus 329 a~i~s~~~~l~~~~lG~~~~~v~~~~~g~--~~~~~~~~~~~~~~~TIll~g~t~~~l~e~~~~l~dal~~~~~~~~~~~ 406 (470)
|++++++++++++++|+ |+.|+++++|+ ++|++|++|++++.+||+|||+|+.+++|.||+++||++++|+++++|+
T Consensus 317 a~ii~~l~~l~~~~LG~-a~~v~~~~ig~~k~~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~ 395 (515)
T 3iyg_E 317 GRIVPRFSELTAEKLGF-AGLVKEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNR 395 (515)
T ss_pred CEEecccccCCHHHCCc-ceEEEEEEeccccceEEEEEcCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999 99999999997 8999999999999999999999999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHhh
Q 012157 407 LVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQG 468 (470)
Q Consensus 407 vv~GGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~ 468 (470)
+|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++++|++
T Consensus 396 iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~ 457 (515)
T 3iyg_E 396 VVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALAENSGMNPIQTMTEVRA 457 (515)
T ss_pred cCCCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 99999999999999999999989999999999999999999999999999999999999986
No 15
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.9e-99 Score=787.81 Aligned_cols=450 Identities=34% Similarity=0.561 Sum_probs=434.3
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhcCCCCccceeeecCCCCEEEecChHHHHhhccccChhHHHHHHHHhhhcccccCC
Q 012157 13 KRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDG 92 (470)
Q Consensus 13 ~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDG 92 (470)
++.+|.+++.+|+.||+.++++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++|||
T Consensus 5 ~~~~g~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~~~GDG 84 (518)
T 3iyg_D 5 DRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDG 84 (518)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccchHHHHHHHHHHHHhhhhhCCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHhhcccccchHHHHHH
Q 012157 93 TTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGDLIAD 172 (470)
Q Consensus 93 ttt~vlL~~~ll~~~~~li~~gi~~~~I~~~~~~a~~~~~~~l~~~~~~v~~~~~~~l~~v~~t~l~sk~~~~~~~~l~~ 172 (470)
|||+++|+++||+++.+++++|+||..|++||+.|++.++++|+++++|++..|++.|.++++|++++|+.+.|.++|++
T Consensus 85 TTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~~~i~~ 164 (518)
T 3iyg_D 85 TTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSAATSLNSKVVSQYSSLLSP 164 (518)
T ss_pred ceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCChHHHHHHhHhhhccccchhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999877889999999999999999999999999
Q ss_pred HHHHHHhhcccccCCCccccCcccceeEEEecCCCcCCcceeeeEEEecccCCCCCCcceecCCeEEEEecccccccccc
Q 012157 173 LAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGEN 252 (470)
Q Consensus 173 l~~~a~~~~~~~~~~g~~~~~~~~~I~i~~~~G~~~~~s~li~Giv~~~~~~~~~~~~~~~~~~kIll~~~~Le~~~~~~ 252 (470)
++++|+.+++....+ ..+|++ +|+|++++|++..||++++|++|++++.| +||+.++||||++++++|++++++.
T Consensus 165 livdAv~~V~~~~~~--~~~d~~-~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~--~mp~~i~n~kIlll~~~Le~~k~~~ 239 (518)
T 3iyg_D 165 MSVDAVMKVIDPATA--TSVDLR-DIKIVKKLGGTIDDCELVEGLVLTQKVAN--SGITRVEKAKIGLIQFCLSAPKTDM 239 (518)
T ss_pred HHHHHHHHhhccccC--CCcccc-eEEEEEcCCCChhhheEeccEEEeccccc--CCCccccCceEEEEEeecccccccc
Confidence 999999999742112 246775 69999999999999999999999999998 6999999999999999999999999
Q ss_pred cceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEe-----cCCCCHHHHHHHHHcCCeeeecCCHhHHHHHHHHh
Q 012157 253 QTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVIT-----EKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKAC 327 (470)
Q Consensus 253 ~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~~~~~lIi~-----~~~i~~~~l~~l~~~~I~vv~~v~~~~L~~ia~~t 327 (470)
+.++.++++++++.+.+.|+++++++++++++.|+|||++ +++|++.+++||.++||++++++++.+|+|||++|
T Consensus 240 ~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~~I~av~~~~~~~le~ia~~t 319 (518)
T 3iyg_D 240 DNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDIEREDIEFICKTI 319 (518)
T ss_pred CceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHcCcEEEecCCHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999 89999999999999999999999999999999999
Q ss_pred CCeeccCCCCCCCCccCCccceEEEEEECC-eEEEEEEecCC-CCeEEEEeccCCHHHHHHHHHHHHHHHHHHHHHhcCC
Q 012157 328 GAVIVNRPDELQESDVGTGAGLFEVKKIGD-EFFAFIVDCKD-PKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNP 405 (470)
Q Consensus 328 Ga~i~s~~~~l~~~~lG~~~~~v~~~~~g~-~~~~~~~~~~~-~~~~TIll~g~t~~~l~e~~~~l~dal~~~~~~~~~~ 405 (470)
||++++++++++++++|+ |+.|++.++|+ ++|++|++|+. ++.|||+|||+|+.+++|.||+++||++++|+++++|
T Consensus 320 Ga~ii~~l~~l~~~~LG~-a~~v~~~~~g~~~~~~~~~g~~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~ 398 (518)
T 3iyg_D 320 GTKPVAHVDQFTADMLGS-AELAEEVSLNGSGKLIKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKR 398 (518)
T ss_pred CCEEecccccCCHHHCCc-CcEEEEEEeCCCceEEEEECCCCCCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999 99999999999 89999999987 8999999999999999999999999999999999999
Q ss_pred eEEecCCHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHhh
Q 012157 406 KLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQG 468 (470)
Q Consensus 406 ~vv~GGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~ 468 (470)
++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++++|++
T Consensus 399 ~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~ 461 (518)
T 3iyg_D 399 ALIAGGGAPEIELALRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRN 461 (518)
T ss_pred CEeecCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 999999999999999999999989999999999999999999999999999999999999987
No 16
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=1.1e-99 Score=798.49 Aligned_cols=459 Identities=26% Similarity=0.464 Sum_probs=437.1
Q ss_pred ccccccccccccc-hhHHHHHHHHHHHHHHHhhhcCCCCccceeeecCCCCEEEecChHHHHhhccccChhHHHHHHHHh
Q 012157 5 VLVLKDSLKRESG-TKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSR 83 (470)
Q Consensus 5 ~~~~~~~~~~~~g-~~~~~~~~~~~~~l~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~ 83 (470)
..+|++++++++| .+++.+|+.||+.++++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|+
T Consensus 11 ~~~l~~~~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~Akll~e~a~ 90 (568)
T 3p9d_H 11 AGLFKQGYNSYSNADGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDIVHPAVKVLVMATE 90 (568)
T ss_dssp CSSCCSSCCBCCCHHHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHHTTTCCCCCHHHHHHHHHHH
T ss_pred hhhhhcCccccccHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHHHH
Confidence 6689999999999 579999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccC--CCCCHHHHHHHHHHHhhcc
Q 012157 84 TQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPI--DTNDRATMLGLVKSCIGTK 161 (470)
Q Consensus 84 ~~~~~~GDGttt~vlL~~~ll~~~~~li~~gi~~~~I~~~~~~a~~~~~~~l~~~~~~v--~~~~~~~l~~v~~t~l~sk 161 (470)
+|++++||||||+++|+++||+++.+++++|+||..|++||+.|++.++++|+++++++ +..+++.|.++++|+++||
T Consensus 91 ~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~~~~~~l~~va~tsl~sK 170 (568)
T 3p9d_H 91 QQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDKNDKNELLKMIKPVISSK 170 (568)
T ss_dssp HHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTHHHHHHHHHHHTTT
T ss_pred hhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999876 4457889999999999999
Q ss_pred cccchHHHHHHHHHHHHhhcccccC--CCccccCcccceeEEEecCCCcCCcceeeeEEEecccCCCCCCcceec---CC
Q 012157 162 FTSQFGDLIADLAIDATTTVGVDLG--QGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIV---NP 236 (470)
Q Consensus 162 ~~~~~~~~l~~l~~~a~~~~~~~~~--~g~~~~~~~~~I~i~~~~G~~~~~s~li~Giv~~~~~~~~~~~~~~~~---~~ 236 (470)
+.+++ ++|++++++|+.+++.+.. .+...+|++ +|+|++++|++++||++++|++|++++. .||++++ ||
T Consensus 171 ~~~~~-~~i~~livdAv~~V~~~~~~~~~~~~~dl~-~I~I~k~~Ggs~~dS~lv~G~v~dk~~~---~m~~~i~~~~n~ 245 (568)
T 3p9d_H 171 KYGSE-DILSELVSEAVSHVLPVAQQAGEIPYFNVD-SIRVVKIMGGSLSNSTVIKGMVFNREPE---GHVKSLSEDKKH 245 (568)
T ss_dssp STTCH-HHHHHHHHHHHTTSCC---------CCCGG-GCEEEEEESSCGGGCEEESSCCBSSCBS---SGGGSCCCCSSC
T ss_pred CcchH-HHHHHHHHHHHHHHhhccccccCCcccccc-eEEEEEccCCCcchheeeccEEEeeccc---CCcEEEecCCcc
Confidence 98887 9999999999999975310 122357775 6999999999999999999999999985 5999999 99
Q ss_pred eEEEEecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCHHHHHHHHHcCCeeeecCC
Q 012157 237 RIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLR 316 (470)
Q Consensus 237 kIll~~~~Le~~~~~~~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~vv~~v~ 316 (470)
||++++++|++++++.++++.+++++++..+.+.|++++++++++|++.|+||||++++|++.+++||.++||+++++++
T Consensus 246 kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~gI~av~~v~ 325 (568)
T 3p9d_H 246 KVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRYGILVLKVPS 325 (568)
T ss_dssp EEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHHTCEEECCCC
T ss_pred eEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHCCeEEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHhCCeeccCCCCCCCCccCCccceEEEEEECCeEEEEEEecC--CCCeEEEEeccCCHHHHHHHHHHHHHH
Q 012157 317 KTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCK--DPKACTVLLRGASKDLLNEVERNLQDA 394 (470)
Q Consensus 317 ~~~L~~ia~~tGa~i~s~~~~l~~~~lG~~~~~v~~~~~g~~~~~~~~~~~--~~~~~TIll~g~t~~~l~e~~~~l~da 394 (470)
+.+|+|||++|||++++++++++++++|+ |+.|++.++|+++|++|++|+ .++.|||+|||+|+.+++|.||+++||
T Consensus 326 ~~~leria~~tGa~ivs~l~~l~~~~LG~-a~~v~~~~ig~~~~~~~~g~~~l~~~~~TIllrG~t~~~l~E~er~i~DA 404 (568)
T 3p9d_H 326 KFELRRLCRVCGATPLPRLGAPTPEELGL-VETVKTMEIGGDRVTVFKQEQGEISRTSTIILRGATQNNLDDIERAIDDG 404 (568)
T ss_dssp HHHHHHHHHHHSCCCCSSSSCCCGGGCEE-CSCCCCCEETTEECBCCCCCSSSCCSSCEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCEEEeccccCCHHHCCc-ceEEEEEEecCceEEEEecCCCCCCCeEEEEECCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 999999999999999999998 789999999999999999999999999
Q ss_pred HHHHHHHhc--CCeEEecCCHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHhhc
Q 012157 395 MSVARNIIK--NPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGK 469 (470)
Q Consensus 395 l~~~~~~~~--~~~vv~GGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~ 469 (470)
++++|++++ ++++|||||++|++|+.+|++++.+.++++|+++++||+||+.||++|++|||+|+.+++++||+.
T Consensus 405 L~vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~ 481 (568)
T 3p9d_H 405 VAAVKGLMKPSGGKLLPGAGATEIELISRITKYGERTPGLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAA 481 (568)
T ss_dssp HHHHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCCSTHHHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHC
T ss_pred HHHHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 999999999 899999999999999999999999999999999999999999999999999999999999999873
No 17
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.2e-99 Score=786.60 Aligned_cols=449 Identities=28% Similarity=0.554 Sum_probs=432.6
Q ss_pred cccccchhHHHHHHHHHHHHHHHhhhcCCCCccceeeecCCCCEEEecChHHHHhhccccChhHHHHHHHHhhhcccccC
Q 012157 12 LKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGD 91 (470)
Q Consensus 12 ~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GD 91 (470)
.+..+|.+++.+|+.||++++++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||
T Consensus 3 ~~~~~~~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~hp~akll~~~a~~qd~e~GD 82 (517)
T 3iyg_Z 3 AEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGD 82 (517)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHHHhCC
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHhhcccccchHHHHH
Q 012157 92 GTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGDLIA 171 (470)
Q Consensus 92 Gttt~vlL~~~ll~~~~~li~~gi~~~~I~~~~~~a~~~~~~~l~~~~~~v~~~~~~~l~~v~~t~l~sk~~~~~~~~l~ 171 (470)
||||+++|+++||+++.+++++|+||..|++||+.|++.++++|+++++|++. +++.|.++++|++++|+.+.+.++|+
T Consensus 83 GTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~-~~~~L~~va~tsl~sKi~~~~~d~la 161 (517)
T 3iyg_Z 83 GTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEM-DRETLIDVARTSLRTKVHAELADVLT 161 (517)
T ss_pred CceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCC-CHHHHHHHHHHHhccccchhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999875 78899999999999999999999999
Q ss_pred HHHHHHHhhcccccCCCccccCcccceeEEEecCCCcCCcceeeeEEEecccCCCCCCcceecCCeEEEEeccccccccc
Q 012157 172 DLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGE 251 (470)
Q Consensus 172 ~l~~~a~~~~~~~~~~g~~~~~~~~~I~i~~~~G~~~~~s~li~Giv~~~~~~~~~~~~~~~~~~kIll~~~~Le~~~~~ 251 (470)
+++++|+..+.. +...+|++ +|+|++++|++..||++++|++|++++.|+ .||++++||+|++++++|++++++
T Consensus 162 ~l~vdaV~~V~~----~~~~~dl~-~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~p-~m~~~ien~kIll~~~~le~~k~e 235 (517)
T 3iyg_Z 162 EAVVDSILAIKK----QDEPIDLF-MVEIMEMKHKSETDTSLIRGLVLDHGARHP-DMKKRVEDAYILTCNVSLEYEKTE 235 (517)
T ss_pred HHHHHHhheecc----CCCcCChh-HheeeeecCCCccccceEeeEEEeccCCCC-CccccccCCeEEEecccccccccc
Confidence 999999998863 12357776 699999999999999999999999999999 899999999999999999999999
Q ss_pred ccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCc---------EEEecCCCCHHHHHHHHHcCCeeeecCCHhHHHH
Q 012157 252 NQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPD---------LVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNR 322 (470)
Q Consensus 252 ~~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~~~~~---------lIi~~~~i~~~~l~~l~~~~I~vv~~v~~~~L~~ 322 (470)
.++++.++++++++.+.+.|+++++..+++|...+++ ||+++++|++.+++||.++||++++++++++|+|
T Consensus 236 ~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~gI~~v~~v~~~~ler 315 (517)
T 3iyg_Z 236 VNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEGIIALRRAKRRNMER 315 (517)
T ss_pred cceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHCCCEEEEecCHHHHHH
Confidence 9999999999999999999999999999999998877 5889999999999999999999999999999999
Q ss_pred HHHHhCCeeccCCCCCCCCc-cCCccceEEEEEECCeEEEEEEecCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHHHH
Q 012157 323 IAKACGAVIVNRPDELQESD-VGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNI 401 (470)
Q Consensus 323 ia~~tGa~i~s~~~~l~~~~-lG~~~~~v~~~~~g~~~~~~~~~~~~~~~~TIll~g~t~~~l~e~~~~l~dal~~~~~~ 401 (470)
||++|||+++++++++++++ +|+ |+ |++..+|+++|+||++|++++.+||+|||+|+.+++|.||+++||++++|++
T Consensus 316 ia~~tGa~iv~~l~~l~~~~~LG~-a~-v~e~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~a 393 (517)
T 3iyg_Z 316 LTLACGGIALNSLDDLNPDCLLGH-AG-VYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNA 393 (517)
T ss_pred HHHHhCCEEecchhhCcccccCCc-ce-EEEEEEcCceEEEEeCCCCchhheeeecCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 999 99 9999999999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEecCCHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHhhc
Q 012157 402 IKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGK 469 (470)
Q Consensus 402 ~~~~~vv~GGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~ 469 (470)
+++|++|||||++|++++.+|++++.+.++++|+++++||+||+.+|++|++|||+|+.+++++|++.
T Consensus 394 v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~ 461 (517)
T 3iyg_Z 394 IDDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAE 461 (517)
T ss_pred HhcceEecCccHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 99999999999999999999999999889999999999999999999999999999999999999863
No 18
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=1.7e-99 Score=796.06 Aligned_cols=461 Identities=31% Similarity=0.554 Sum_probs=435.6
Q ss_pred CCCccccccc--cccccchhHHHHHHHHHHHHHHHhhhcCCCCccceeeecCCCCEEEecChHHHHhhccccChhHHHHH
Q 012157 2 HSPVLVLKDS--LKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMI 79 (470)
Q Consensus 2 ~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~ 79 (470)
+.|+.+++++ .++.+|.+++.+|+.||+.++++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|++
T Consensus 26 ~~~~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~ 105 (562)
T 3p9d_E 26 GRPFIIVKDQGNKKRQHGLEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEIAKLLV 105 (562)
T ss_dssp ----CCCSSBCCCSCSHHHHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCSHHHHHHH
T ss_pred CCCeEEeccCCcceecchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCCHHHHHHH
Confidence 5566666766 47789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcccccCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccCCCCC----HHHHHHHHH
Q 012157 80 ELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTND----RATMLGLVK 155 (470)
Q Consensus 80 ~~~~~~~~~~GDGttt~vlL~~~ll~~~~~li~~gi~~~~I~~~~~~a~~~~~~~l~~~~~~v~~~~----~~~l~~v~~ 155 (470)
++|++|++++||||||+++|+++||+++.+++++|+||..|++||+.|++.++++|+++++|++..+ ++.|.++++
T Consensus 106 e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~~vA~ 185 (562)
T 3p9d_E 106 QLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAK 185 (562)
T ss_dssp HHHHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHHHHHHH
T ss_pred HHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999987532 278999999
Q ss_pred HHhhcccccchHHHHHHHHHHHHhhcccccCCCccccCcccceeEEEecCCCcCCcceeeeEEEecccCCCCCCccee--
Q 012157 156 SCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKI-- 233 (470)
Q Consensus 156 t~l~sk~~~~~~~~l~~l~~~a~~~~~~~~~~g~~~~~~~~~I~i~~~~G~~~~~s~li~Giv~~~~~~~~~~~~~~~-- 233 (470)
|++++|+.+.|.++|++++++|+..+... ..+++|++ +|+|++++|++++||++++|++|++++.|+ .||+..
T Consensus 186 tSl~sK~i~~~~d~la~l~vdAV~~V~~~---~~~~~d~~-~I~I~k~~Ggs~~ds~lveGmv~dk~~~sp-~m~~~~~~ 260 (562)
T 3p9d_E 186 TSLGSKIVSKDHDRFAEMAVEAVINVMDK---DRKDVDFD-LIKMQGRVGGSISDSKLINGVILDKDFSHP-QMPKCVLP 260 (562)
T ss_dssp HHHSSSTTTTTHHHHHHHHHHHHHTSSTT---TCSCCCCC-CCEEEEESSSCGGGCEEESSEEESSCCCTT-SCCC----
T ss_pred HhcCCchhHHHHHHHHHHHHHHheeeccc---ccCCCCcc-cEEEEEecCCChhhhceeeeEEEecCCCCC-CcCccccc
Confidence 99999999999999999999999988642 12356775 699999999999999999999999999999 899998
Q ss_pred ----cCCeEEEEecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCHHHHHHHHHcCC
Q 012157 234 ----VNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGV 309 (470)
Q Consensus 234 ----~~~kIll~~~~Le~~~~~~~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I 309 (470)
++++|++++++|++.+++.++++.+++++++..+.+.|++++++++++|++.|+||||++++|++.++++|.++||
T Consensus 261 ~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~I 340 (562)
T 3p9d_E 261 KEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDL 340 (562)
T ss_dssp -TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTTC
T ss_pred ccccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeecCCHhHHHHHHHHhCCeeccCCCCCCCCccCCccceEEEEEECC--eEEEEEEecCCCCeEEEEeccCCHHHHHHH
Q 012157 310 SAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGD--EFFAFIVDCKDPKACTVLLRGASKDLLNEV 387 (470)
Q Consensus 310 ~vv~~v~~~~L~~ia~~tGa~i~s~~~~l~~~~lG~~~~~v~~~~~g~--~~~~~~~~~~~~~~~TIll~g~t~~~l~e~ 387 (470)
++++++++++|+|||++|||++++++++++++++|+ |+.|++.++|+ ++|++|++|++++.+||+|||+|+.+++|.
T Consensus 341 ~~v~~v~k~~le~ia~~TGa~iis~l~~l~~~~LG~-a~~v~~~~ig~~~~~~~~i~g~~~~~~~TIllrG~te~~l~E~ 419 (562)
T 3p9d_E 341 PAVRWVGGQELEHIAISTNGRIVPRFQDLSKDKLGT-CSRIYEQEFGTTKDRMLIIEQSKETKTVTCFVRGSNKMIVDEA 419 (562)
T ss_dssp CCEECCCTTTHHHHHHHHCCCEEESSSCCCTTSCEE-CSCEEEECCSSSSCCEEEECCCSCCSCCEEEEECTTTTTHHHH
T ss_pred EEEeccCHHHHHHHHHHhCCEEEeccccCCHHHCCc-ceEEEEEEeccCCceEEEEecCCCCCeEEEEEeCCCHHHHHHH
Confidence 999999999999999999999999999999999999 99999999985 899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCeEEecCCHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHh
Q 012157 388 ERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQ 467 (470)
Q Consensus 388 ~~~l~dal~~~~~~~~~~~vv~GGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~ 467 (470)
||+++||++++|+++++|++|||||++|++|+++|++++.+.++++|+++++|++||+.||++|++|||+|+.+++++|+
T Consensus 420 kr~i~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~ 499 (562)
T 3p9d_E 420 ERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLK 499 (562)
T ss_dssp THHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCcCCCCcHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999998999999999999999999999999999999999999998
Q ss_pred h
Q 012157 468 G 468 (470)
Q Consensus 468 ~ 468 (470)
+
T Consensus 500 ~ 500 (562)
T 3p9d_E 500 S 500 (562)
T ss_dssp H
T ss_pred H
Confidence 5
No 19
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=4e-99 Score=792.45 Aligned_cols=458 Identities=25% Similarity=0.481 Sum_probs=437.6
Q ss_pred ccccccccccccchhHHHHHHHHHHHHHHHhhhcCCCCccceeeecCCCCEEEecChHHHHhhccccChhHHHHHHHHhh
Q 012157 5 VLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRT 84 (470)
Q Consensus 5 ~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~ 84 (470)
+.++++++++.+|.+++.+|+.||++++++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++
T Consensus 3 ~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e~a~~ 82 (546)
T 3p9d_F 3 LQLLNPKAESLRRDAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSPTAVLIARAAAA 82 (546)
T ss_dssp CCSSCTTEEEEEHHHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCCHHHHHHHHHHHH
T ss_pred ccccCCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHH
Confidence 45788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccCCC--CCHHHHHHHHHHHhhccc
Q 012157 85 QDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDT--NDRATMLGLVKSCIGTKF 162 (470)
Q Consensus 85 ~~~~~GDGttt~vlL~~~ll~~~~~li~~gi~~~~I~~~~~~a~~~~~~~l~~~~~~v~~--~~~~~l~~v~~t~l~sk~ 162 (470)
|++++||||||+++|+++||+++.+++++|+||..|++||+.|++.++++|+++++|++. .|++.|.++++|++++|+
T Consensus 83 qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi 162 (546)
T 3p9d_F 83 QDEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTKV 162 (546)
T ss_dssp HHHHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCSTT
T ss_pred HHHHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHHHHhCCCc
Confidence 999999999999999999999999999999999999999999999999999999999864 468899999999999999
Q ss_pred ccchHHHHHHHHHHHHhhcccccCCCccccCcccceeEEEecCCCcCCcceeeeEEEecccCCCCCCcceecCCeEEEEe
Q 012157 163 TSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLD 242 (470)
Q Consensus 163 ~~~~~~~l~~l~~~a~~~~~~~~~~g~~~~~~~~~I~i~~~~G~~~~~s~li~Giv~~~~~~~~~~~~~~~~~~kIll~~ 242 (470)
.+.|.++|++++++|+..+.... ..++|++ +|+|++++|++..||++++|++|++++.++ .||++++||||++++
T Consensus 163 ~~~~~d~la~l~vdaV~~V~~~~---~~~~dl~-~I~i~ki~Gg~~~ds~lv~G~v~dk~~~~~-~m~~~~en~kIll~~ 237 (546)
T 3p9d_F 163 DADLTEVLTPIVTDAVLSVYDAQ---ADNLDLH-MVEIMQMQHLSPKDTTFIKGLVLDHGGRHP-DMPTRVKNAYVLILN 237 (546)
T ss_dssp HHHHCSSHHHHHHHHHHHTHHHH---HTTCCGG-GEEEECCCCSCTTTCCCCSSCEESCCCCSS-SSCSSBCSCCCCEEC
T ss_pred chhHHHHHHHHHHHhheEeecCC---CCcccch-heEEEEecCCCccccEEEeeEEEecccccc-cCcceecCceEEEec
Confidence 99999999999999999986321 1256776 699999999999999999999999999999 899999999999999
Q ss_pred cccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcC----------CcEEEecCCCCHHHHHHHHHcCCeee
Q 012157 243 SPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFK----------PDLVITEKGLSDLACHYLSKAGVSAI 312 (470)
Q Consensus 243 ~~Le~~~~~~~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~~~----------~~lIi~~~~i~~~~l~~l~~~~I~vv 312 (470)
|+|++++++.++++.+++++++..+.+.|++++++.+++|...+ ++||+++++|++.+++||.++||+++
T Consensus 238 ~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~gI~~v 317 (546)
T 3p9d_F 238 VSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHNILAL 317 (546)
T ss_dssp CCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTTCEEE
T ss_pred CcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCCCeeE
Confidence 99999999999999999999999999999999999999998754 34999999999999999999999999
Q ss_pred ecCCHhHHHHHHHHhCCeeccCCCCCCCCccCCccceEEEEEECCeEEEEEEecCCCCeEEEEeccCCHHHHHHHHHHHH
Q 012157 313 RRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQ 392 (470)
Q Consensus 313 ~~v~~~~L~~ia~~tGa~i~s~~~~l~~~~lG~~~~~v~~~~~g~~~~~~~~~~~~~~~~TIll~g~t~~~l~e~~~~l~ 392 (470)
+++++++|+|||++|||++++++++++++++|+ |+.|++..+|+++|+||++|++++.|||+|||+|+.+++|.||+++
T Consensus 318 r~v~~~~leria~~tGa~ii~~l~~l~~~~LG~-a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~te~~l~E~kr~l~ 396 (546)
T 3p9d_F 318 RRAKRRNMERLQLVTGGEAQNSVEDLSPQILGF-SGLVYQETIGEEKFTYVTENTDPKSCTILIKGSTHYALAQTKDAVR 396 (546)
T ss_dssp CCCCHHHHHHHHHTTTBCCCCCCSSCSTTCCBC-CCCBCBCCCSSCCCEECSSCSCCSCEEEECCCSCHHHHHHHHHHHH
T ss_pred ecCCHHHHHHHHHHhCCEEecchhhCCHhHCCc-ccEEEEEEecCceEEEEecCCCCceEEEEECCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCeEEecCCHHHHHHHHHHHH---HhcCCCChhhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHhh
Q 012157 393 DAMSVARNIIKNPKLVPGGGATELTVSATLKQ---KSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQG 468 (470)
Q Consensus 393 dal~~~~~~~~~~~vv~GGG~~E~~l~~~L~~---~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~ 468 (470)
||++++|+++++|++|||||++|++++.+|++ ++...++++|+++++|++||+.||++|++|||+|+.+++++|++
T Consensus 397 DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~ 475 (546)
T 3p9d_F 397 DGLRAVANVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAKGKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVED 475 (546)
T ss_dssp HHHHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHH
T ss_pred HHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999 58888999999999999999999999999999999999999985
No 20
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=8.1e-97 Score=770.12 Aligned_cols=449 Identities=29% Similarity=0.452 Sum_probs=429.9
Q ss_pred cccccccc-hhHHHHHHHHHHHHHHHhhhcCCCCccceeeecCCCCEEEecChHHHHhhccccChhHHHHHHHHhhhccc
Q 012157 10 DSLKRESG-TKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEE 88 (470)
Q Consensus 10 ~~~~~~~g-~~~~~~~~~~~~~l~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~ 88 (470)
+++++++| .+++.+|+.||+.++++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|+++
T Consensus 1 ~~~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~ 80 (512)
T 3iyg_Q 1 EGAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPAAKMIVMASHMQEQE 80 (512)
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHHHHHhhhh
Confidence 46789999 79999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccc--cCCCCCHHHHHHHHHHHhhcccccch
Q 012157 89 VGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAM--PIDTNDRATMLGLVKSCIGTKFTSQF 166 (470)
Q Consensus 89 ~GDGttt~vlL~~~ll~~~~~li~~gi~~~~I~~~~~~a~~~~~~~l~~~~~--~v~~~~~~~l~~v~~t~l~sk~~~~~ 166 (470)
+||||||+++|+++||+++.+++++|+||..|++||+.|++.++++|+++++ +.+..|++.|.++++|++++|+.+ +
T Consensus 81 ~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~-~ 159 (512)
T 3iyg_Q 81 VGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYG-N 159 (512)
T ss_pred hCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCcc-c
Confidence 9999999999999999999999999999999999999999999999999854 455567999999999999999865 6
Q ss_pred HHHHHHHHHHHHhhcccccCCCccccCcccceeEEEecCCCcCCcceeeeEEEecccCCCCCCcceecCCeEEEEecccc
Q 012157 167 GDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLE 246 (470)
Q Consensus 167 ~~~l~~l~~~a~~~~~~~~~~g~~~~~~~~~I~i~~~~G~~~~~s~li~Giv~~~~~~~~~~~~~~~~~~kIll~~~~Le 246 (470)
+++|++++++|+.+++.+ ++ .+|++ +|+|.+.+|+++.+|++++|++|++++.+ ||+..+||+|+++++|++
T Consensus 160 ~~~i~~livdAv~~V~~~--~~--~i~v~-~I~i~k~~Ggs~~ds~lv~G~~~dk~~~~---~~~~~~n~kI~ll~~~le 231 (512)
T 3iyg_Q 160 EVFLAKLIAQACVSIFPD--SG--HFNVD-NIRVCKILGSGVHSSSVLHGMVFKKETEG---DVTSVKDAKIAVYSCPFD 231 (512)
T ss_pred hHHHHHHHHHHHHHHhcc--CC--cccHh-HeeEeeccCCCcccceEEeeEEEecCcCC---CCcccccCceEEEecccc
Confidence 899999999999999852 12 46776 59999999999999999999999999864 899999999999999999
Q ss_pred cccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCHHHHHHHHHcCCeeeecCCHhHHHHHHHH
Q 012157 247 YKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKA 326 (470)
Q Consensus 247 ~~~~~~~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~vv~~v~~~~L~~ia~~ 326 (470)
+.+++.+.++.+++++++..+.+.|+++++++++++++.|+|||+++++|++.++++|.++||++++++++.+|+|||++
T Consensus 232 ~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~~I~av~~~~~~dle~ia~~ 311 (512)
T 3iyg_Q 232 GMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKYNIMLVRLNSKWDLRRLCKT 311 (512)
T ss_pred cccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeEEEEeCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCeeccCCCCCCCCccCCccceEEEEEECCeEEEEEEecC-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHHHHhcCC
Q 012157 327 CGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCK-DPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNP 405 (470)
Q Consensus 327 tGa~i~s~~~~l~~~~lG~~~~~v~~~~~g~~~~~~~~~~~-~~~~~TIll~g~t~~~l~e~~~~l~dal~~~~~~~~~~ 405 (470)
|||++++++++++++++|+ |+.|++.++|+++|++|++|+ .++.+||+|||+|+.+++|.||+++||++++|+++++|
T Consensus 312 tGa~iis~l~~~~~~~LG~-a~~v~~~~~g~~~~~~~~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~ 390 (512)
T 3iyg_Q 312 VGATALPRLNPPVLEEMGH-CDSVYLSEVGDTQVVVFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDK 390 (512)
T ss_pred hCCEEecccccCCHHHCCc-ccEEEEEEeCCeEEEEEEcccCCCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999 999999999999999999996 58899999999999999999999999999999999999
Q ss_pred eEEecCCHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHhh
Q 012157 406 KLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQG 468 (470)
Q Consensus 406 ~vv~GGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~ 468 (470)
++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++++|++
T Consensus 391 ~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~ 453 (512)
T 3iyg_Q 391 RLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYA 453 (512)
T ss_pred CEecCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 999999999999999999999889999999999999999999999999999999999999986
No 21
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=3.1e-98 Score=783.33 Aligned_cols=454 Identities=30% Similarity=0.479 Sum_probs=434.7
Q ss_pred ccccccccccccchhHHHHHHHHHHHHHHHhhhcCCCCccceeeec-CCCCEEEecChHHHHhhccccChhHHHHHHHHh
Q 012157 5 VLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLD-ASGGIVVTNDGNAILRELDVAHPAAKSMIELSR 83 (470)
Q Consensus 5 ~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~kli~~-~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~ 83 (470)
+.+|+++++..+|.++|.+|+.||+.++++|++||||+||+|||++ +.|+++|||||+|||++|+++||+|+|++++|+
T Consensus 3 ~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP~Akll~e~a~ 82 (527)
T 3p9d_B 3 VQIFGDQVTEERAENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPAAKVLVNISK 82 (527)
T ss_dssp CCSSCSCEEEEESHHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCCHHHHHHHHHHH
T ss_pred eehhcCcchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCCHHHHHHHHHHH
Confidence 5678999999999999999999999999999999999999999999 899999999999999999999999999999999
Q ss_pred hhcccccCChhHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHhhccccCCCCC---HHHHHHHHHHHhh
Q 012157 84 TQDEEVGDGTTSVIVLAGEMLHVAEEFIDK-NYHPTVICRAYNKALEDAVAVLDKIAMPIDTND---RATMLGLVKSCIG 159 (470)
Q Consensus 84 ~~~~~~GDGttt~vlL~~~ll~~~~~li~~-gi~~~~I~~~~~~a~~~~~~~l~~~~~~v~~~~---~~~l~~v~~t~l~ 159 (470)
+|++++||||||+++||++||+++.+++++ |+||..|++||+.|++.++++|++++++++..+ ++.|.++++|+++
T Consensus 83 ~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl~ 162 (527)
T 3p9d_B 83 VQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLS 162 (527)
T ss_dssp HHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHHT
T ss_pred HhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhccc
Confidence 999999999999999999999999999999 999999999999999999999999999987533 7889999999999
Q ss_pred cccccchHHHHHHHHHHHHhhcccccCCCccccCcccceeEEEecCCCcCCcceeeeEEEecccCCCCCCcceecCCeEE
Q 012157 160 TKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRII 239 (470)
Q Consensus 160 sk~~~~~~~~l~~l~~~a~~~~~~~~~~g~~~~~~~~~I~i~~~~G~~~~~s~li~Giv~~~~~~~~~~~~~~~~~~kIl 239 (470)
+|+.+.|+++|++++++|+.+++. ++ |++ .|+|++++|+++.||++++|++|++++.++ . |+.++||||+
T Consensus 163 sK~~~~~~~~i~~li~dAv~~V~~---~~----~~~-~I~V~k~~gg~~~ds~lv~G~~~dk~~~~~-~-p~~~~n~kIl 232 (527)
T 3p9d_B 163 SKILSQDKDHFAELATNAILRLKG---ST----NLE-HIQIIKILGGKLSDSFLDEGFILAKKFGNN-Q-PKRIENAKIL 232 (527)
T ss_dssp TSGGGGGHHHHHHHHHHHHHTTCT---TC----CTT-SSCCCBCCCSSSSCCCEESSCCCSCCCSSS-C-CSCCSSCEEE
T ss_pred cCcccchHHHHHHHHHHHHHHhcc---cC----Ccc-eEEEEEcCCCCccccEEEEeEEEecccCCC-C-CeeeecceEE
Confidence 999999999999999999999985 22 332 599999999999999999999999999997 4 8899999999
Q ss_pred EEeccccccccc-ccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCHHHHHHHHHcCCeeeecCCHh
Q 012157 240 LLDSPLEYKKGE-NQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKT 318 (470)
Q Consensus 240 l~~~~Le~~~~~-~~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~vv~~v~~~ 318 (470)
+++++|++++++ ++.++.+++++++..+.+.|++++++++++|++.|+|||+++++|++.++++|.++||++++++++.
T Consensus 233 ll~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~i~av~~~~~~ 312 (527)
T 3p9d_B 233 IANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLGINSIEHADFE 312 (527)
T ss_dssp EECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTCBCCCCCCHHH
T ss_pred EeccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCCCEEEecCCHH
Confidence 999999999998 6889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCeeccCCCCCCCCccCCccceEEEEEECCeEEEEEEecCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 012157 319 DNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVA 398 (470)
Q Consensus 319 ~L~~ia~~tGa~i~s~~~~l~~~~lG~~~~~v~~~~~g~~~~~~~~~~~~~~~~TIll~g~t~~~l~e~~~~l~dal~~~ 398 (470)
+|+|+|++|||++++++++++++++|+ |+.|++..+|+++|++|++|+++++|||+|||+|+.+++|.||+++||++++
T Consensus 313 dle~ia~~tGa~iv~~~~~~~~~~LG~-a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrg~te~~l~E~kr~i~DAl~~~ 391 (527)
T 3p9d_B 313 GVERLALVTGGEVVSTFDEPSKCKLGE-CDVIEEIMLGEQPFLKFSGCKAGEACTIVLRGATDQTLDEAERSLHDALSVL 391 (527)
T ss_dssp HHHHHHHHTCCCCCSTTSCCTTSCEEC-SBCCBCCCSSSCCBCCBCSSCCSCCEECBCCTTCTTHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHhCCEEecchhhCCHHHCCC-CcEEEEEEecceEEEEEECCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHhhc
Q 012157 399 RNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGK 469 (470)
Q Consensus 399 ~~~~~~~~vv~GGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~ 469 (470)
|+++++|++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++++|++.
T Consensus 392 r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~ 462 (527)
T 3p9d_B 392 SQTTKETRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSS 462 (527)
T ss_dssp HHHHHCCCEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHH
T ss_pred HHHHhcCCcccCCcHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHH
Confidence 99999999999999999999999999988888999999999999999999999999999999999999863
No 22
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=9e-92 Score=729.38 Aligned_cols=419 Identities=35% Similarity=0.624 Sum_probs=339.2
Q ss_pred eeecCCCCEEEecChHHHHhhccccChhHHHHHHHHhhhcccccCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 012157 47 MLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNK 126 (470)
Q Consensus 47 li~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGttt~vlL~~~ll~~~~~li~~gi~~~~I~~~~~~ 126 (470)
||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||+++|+++||+++.+++++|+||..|++||+.
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~ 80 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHPAAKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGYRH 80 (500)
T ss_dssp ------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCHHHHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccCCCCCHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhcccccCCCccccCcccceeEEEecCC
Q 012157 127 ALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGG 206 (470)
Q Consensus 127 a~~~~~~~l~~~~~~v~~~~~~~l~~v~~t~l~sk~~~~~~~~l~~l~~~a~~~~~~~~~~g~~~~~~~~~I~i~~~~G~ 206 (470)
|++.++++|+++++|++..|++.|.++++|+|+||+.++|+++|++++++|+.+++.+. +|..++|+.++|+|++++|+
T Consensus 81 A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~-~g~~~~di~~~I~V~k~~G~ 159 (500)
T 3aq1_B 81 AAEKCREILETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEE-EDGLKVNVLENIKIEKRAGG 159 (500)
T ss_dssp HHHHHHHHHHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECC-SSSCEECHHHHEEEEEEESS
T ss_pred HHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccc-cCCccccccccEEEEEecCC
Confidence 99999999999999998778999999999999999999999999999999999998531 24445773347999999999
Q ss_pred CcCCcceeeeEEEecccCCCCCCcceecCCeEEEEecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 012157 207 QLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFK 286 (470)
Q Consensus 207 ~~~~s~li~Giv~~~~~~~~~~~~~~~~~~kIll~~~~Le~~~~~~~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~~~ 286 (470)
++++|++++|++|++++.|+ .||++++||||++++++|++++++.++++.++++++++.+.+.|++++++++++|++.|
T Consensus 160 ~~~ds~lv~G~v~dk~~~~~-~m~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g 238 (500)
T 3aq1_B 160 SIDDSELIDGLVIDKERSHP-NMPEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIASG 238 (500)
T ss_dssp CGGGCEEESEEEESCCCSST-TSCSEEEEEEEEEESSCBCC-------------------------CHHHHHHHHHHTTC
T ss_pred CccceEEEeeeEEeecCCCC-CCcccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999998 89999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCHHHHHHHHHcCCeeeecCCHhHHHHHHHHhCCeeccCCCCCCCCccCCccceEEEEEECCeEEEEEEec
Q 012157 287 PDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDC 366 (470)
Q Consensus 287 ~~lIi~~~~i~~~~l~~l~~~~I~vv~~v~~~~L~~ia~~tGa~i~s~~~~l~~~~lG~~~~~v~~~~~g~~~~~~~~~~ 366 (470)
+||||++++|++.+++||.++||++++++++++|+|||++|||++++++++++++++|+ |+.|++.++|+++|++|++|
T Consensus 239 ~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~iis~l~~~~~~~LG~-a~~v~~~~ig~~~~~~~~g~ 317 (500)
T 3aq1_B 239 ANVVFCQKGIDDMAQYYIEKAGIYAVRRVKKSDLKRLSKVTGATIIQDLDQITTEDVGT-AGLVEEKEVRGGKMTYVTGC 317 (500)
T ss_dssp CSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSCTTCCCSTTCEE-EEEEEEEECSSSEEEEEEEE
T ss_pred cCEEEECCCcCHHHHHHHHHCCEEEEEeCCHHHHHHHHHHhCCeEecccccCCHhHCCC-ceEEEEEEecCeEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred CCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHHHHhcCCeEEecCCHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHH
Q 012157 367 KDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEA 446 (470)
Q Consensus 367 ~~~~~~TIll~g~t~~~l~e~~~~l~dal~~~~~~~~~~~vv~GGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ 446 (470)
++++.+||+|||+|+.+++|.||+++||++++|+++++|++|||||++|++++.+|++++.+.++++|+++++||+||+.
T Consensus 318 ~~~~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ 397 (500)
T 3aq1_B 318 QNSKAVTVLLHGGTEHVVDSLDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQLAVSKFAEALEV 397 (500)
T ss_dssp TTCCCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHTTH
T ss_pred CCCceEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHhh
Q 012157 447 IPRTLAQNCGINVIRTMTALQG 468 (470)
Q Consensus 447 ip~~L~~NaG~~~~~~~~~l~~ 468 (470)
||++|++|||+|+.+++++||+
T Consensus 398 ip~~La~NaG~d~~~~v~~l~~ 419 (500)
T 3aq1_B 398 IPVALAENAGLDPIDIMVELRS 419 (500)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHH
Confidence 9999999999999999999985
No 23
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=8.9e-84 Score=671.67 Aligned_cols=405 Identities=21% Similarity=0.330 Sum_probs=375.2
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhcCCCCccceeeecCCCCEEEecChHHHHhhccccCh----hHHHHHHHHhhhccc
Q 012157 13 KRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHP----AAKSMIELSRTQDEE 88 (470)
Q Consensus 13 ~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~hP----~a~ll~~~~~~~~~~ 88 (470)
+..+|.++|.+|+.||..++++|++||||+||+|||+++.|+++|||||+||+++|+++|| +|+|+++++++|+++
T Consensus 4 ~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e 83 (547)
T 1kp8_A 4 DVKFGNDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDA 83 (547)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHhhccc
Confidence 3678999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHhhcccccchHH
Q 012157 89 VGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGD 168 (470)
Q Consensus 89 ~GDGttt~vlL~~~ll~~~~~li~~gi~~~~I~~~~~~a~~~~~~~l~~~~~~v~~~~~~~l~~v~~t~l~sk~~~~~~~ 168 (470)
+||||||+++|+++||+++.+++++|+||..|++||+.|++.++++|+++++|++ +++.|.+++++++ ++++
T Consensus 84 ~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~--~~e~l~~vA~iS~------~~~~ 155 (547)
T 1kp8_A 84 AGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCS--DSKAIAQVGTISA------NSDE 155 (547)
T ss_dssp HSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCC--SHHHHHHHHHHHT------TSCH
T ss_pred cCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCC--CHHHHHHHHHHhc------cchh
Confidence 9999999999999999999999999999999999999999999999999999986 6889999999884 4689
Q ss_pred HHHHHHHHHHhhcccccCCCccccCcccceeEEEecCCCcCCc-ceeeeEEEecccCCCC------CCcceecCCeEEEE
Q 012157 169 LIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDS-RVLKGVMFNKDVVAPG------KMRRKIVNPRIILL 241 (470)
Q Consensus 169 ~l~~l~~~a~~~~~~~~~~g~~~~~~~~~I~i~~~~G~~~~~s-~li~Giv~~~~~~~~~------~~~~~~~~~kIll~ 241 (470)
++++++++|+.+++. ++ .|+|+ +|+++++| ++++|++|+++|.++. .|+++++||+|+++
T Consensus 156 ~i~~liadAv~~V~~---dg--------~I~Ve--~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~ 222 (547)
T 1kp8_A 156 TVGKLIAEAMDKVGK---EG--------VITVE--DGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLA 222 (547)
T ss_dssp HHHHHHHHHHHHHCT---TS--------EEEEE--CCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECE
T ss_pred HHHHHHHHHHHHhCc---CC--------cEEEE--eCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEE
Confidence 999999999999974 33 27775 89999998 9999999999999862 47888999999999
Q ss_pred ecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCHHHHHHHHHcCC------eeee--
Q 012157 242 DSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGV------SAIR-- 313 (470)
Q Consensus 242 ~~~Le~~~~~~~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I------~vv~-- 313 (470)
++++ ++++++. ++++++.+.|+||||++++|++.++++|..|+| ++++
T Consensus 223 d~~I-------------s~~~~l~-----------~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~ 278 (547)
T 1kp8_A 223 DKKI-------------SNIREML-----------PVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAP 278 (547)
T ss_dssp ESEE-------------CCGGGTH-----------HHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECS
T ss_pred cCcC-------------CCHHHHH-----------HHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEecc
Confidence 9974 4555543 678899999999999999999999999999755 5544
Q ss_pred ---cCCHhHHHHHHHHhCCeeccC-----CCCCCCCccCCccceEEEEEECCeEEEEEEecCCC----------------
Q 012157 314 ---RLRKTDNNRIAKACGAVIVNR-----PDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDP---------------- 369 (470)
Q Consensus 314 ---~v~~~~L~~ia~~tGa~i~s~-----~~~l~~~~lG~~~~~v~~~~~g~~~~~~~~~~~~~---------------- 369 (470)
++++++|+|||++|||+++++ +++++++++|+ |+.|++ ++++|++|++|.++
T Consensus 279 ~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~-a~~v~~---~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~ 354 (547)
T 1kp8_A 279 GFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQ-AKRVVI---NKDTTTIIDGVGEEAAIQGRVAQIRQQIEE 354 (547)
T ss_dssp SCHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEE-EEEEEE---CSSCEEEEEECCCHHHHHHHHHHHHHHHHS
T ss_pred ccccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCc-eeEEEE---ccceEEEEcCCCCHHHHHHHHHHHHHHhhc
Confidence 899999999999999999995 99999999999 999976 45899999999754
Q ss_pred -------------------CeEEEEeccCCHHHHHHHHHHHHHHHHHHHHHhcCCeEEecCCHHHHHHHHHHHHHhcCCC
Q 012157 370 -------------------KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIE 430 (470)
Q Consensus 370 -------------------~~~TIll~g~t~~~l~e~~~~l~dal~~~~~~~~~~~vv~GGG~~E~~l~~~L~~~~~~~~ 430 (470)
+++||+|||+|+.+++|.||+++||++++|+++++| +|||||++|++++.+|++++. .+
T Consensus 355 ~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~-~~ 432 (547)
T 1kp8_A 355 ATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEG-VVAGGGVALIRVASKLADLRG-QN 432 (547)
T ss_dssp CCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHHTTTCCC-SS
T ss_pred ccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccCC-EEeCCcHHHHHHHHHHHHHhc-cC
Confidence 789999999999999999999999999999999999 999999999999999999876 77
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHhh
Q 012157 431 GIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQG 468 (470)
Q Consensus 431 ~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~ 468 (470)
+++|+++++|++||+.||++|++|||+|+.+++++|++
T Consensus 433 g~~q~~i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~ 470 (547)
T 1kp8_A 433 ADQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKG 470 (547)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 89999999999999999999999999999999999986
No 24
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=2.1e-83 Score=669.92 Aligned_cols=405 Identities=22% Similarity=0.325 Sum_probs=374.9
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhcCCCCccceeeecCCCCEEEecChHHHHhhccccCh----hHHHHHHHHhhhccc
Q 012157 13 KRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHP----AAKSMIELSRTQDEE 88 (470)
Q Consensus 13 ~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~hP----~a~ll~~~~~~~~~~ 88 (470)
+..+|.++|.+|+.||..++++|+|||||+||+|||+++.|+++|||||+||+++|+++|| +|+|++++|++|+++
T Consensus 4 ~~~~g~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e 83 (543)
T 1we3_A 4 ILVFDEAARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASKTNDV 83 (543)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHHhhhee
Confidence 3678999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHhhcccccchHH
Q 012157 89 VGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGD 168 (470)
Q Consensus 89 ~GDGttt~vlL~~~ll~~~~~li~~gi~~~~I~~~~~~a~~~~~~~l~~~~~~v~~~~~~~l~~v~~t~l~sk~~~~~~~ 168 (470)
+||||||+++|+++||+++.+++++|+||..|++||+.|++.++++|+++++|++ +++.|.++++++.+ ++
T Consensus 84 ~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~--~~~~l~~vA~iS~~-------~~ 154 (543)
T 1we3_A 84 AGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVE--DRKAIEEVATISAN-------DP 154 (543)
T ss_dssp HSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCC--SHHHHHHHHHHHHT-------CH
T ss_pred cCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCC--CHHHHHHhhhhhcC-------CH
Confidence 9999999999999999999999999999999999999999999999999999986 68899999998752 68
Q ss_pred HHHHHHHHHHhhcccccCCCccccCcccceeEEEecCCCcCCc-ceeeeEEEecccCCCC------CCcceecCCeEEEE
Q 012157 169 LIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDS-RVLKGVMFNKDVVAPG------KMRRKIVNPRIILL 241 (470)
Q Consensus 169 ~l~~l~~~a~~~~~~~~~~g~~~~~~~~~I~i~~~~G~~~~~s-~li~Giv~~~~~~~~~------~~~~~~~~~kIll~ 241 (470)
++++++++|+.+++. ++ .|+|+ +|+++++| ++++|++|+++|.++. .|+++++||+|+++
T Consensus 155 ~i~~li~dAv~~V~~---~g--------~I~Ve--~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~ 221 (543)
T 1we3_A 155 EVGKLIADAMEKVGK---EG--------IITVE--ESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIV 221 (543)
T ss_dssp HHHHHHHHHHHTTCT---TS--------EEEEE--ECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCc---CC--------cEEEe--cCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEE
Confidence 899999999999974 33 27675 79999998 9999999999998852 47888999999999
Q ss_pred ecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCHHHHHHHHHcC------Ceeee--
Q 012157 242 DSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAG------VSAIR-- 313 (470)
Q Consensus 242 ~~~Le~~~~~~~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~------I~vv~-- 313 (470)
++++ ++++++ .++++++.+.|+||||++++|++.++++|..|+ |++++
T Consensus 222 d~~I-------------s~~~~l-----------~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~ 277 (543)
T 1we3_A 222 EKKV-------------SNVREL-----------LPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAP 277 (543)
T ss_dssp SSCB-------------CCHHHH-----------HHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECS
T ss_pred CCCc-------------CCHHHH-----------HHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEecc
Confidence 9974 455554 367899999999999999999999999999864 45555
Q ss_pred ---cCCHhHHHHHHHHhCCeeccC-----CCCCCCCccCCccceEEEEEECCeEEEEEEecCC-----------------
Q 012157 314 ---RLRKTDNNRIAKACGAVIVNR-----PDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKD----------------- 368 (470)
Q Consensus 314 ---~v~~~~L~~ia~~tGa~i~s~-----~~~l~~~~lG~~~~~v~~~~~g~~~~~~~~~~~~----------------- 368 (470)
++++++|+|||++|||+++++ +++++++++|+ |+.|++ +.+++++|++|.+
T Consensus 278 ~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~-a~~v~~---~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~ 353 (543)
T 1we3_A 278 GFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGR-AERVRI---TKDETTIVGGKGKKEDIEARINGIKKELET 353 (543)
T ss_dssp SSHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEE-EEEEEE---CSSCEEEEEECCCHHHHHHHHHHHHHHHTT
T ss_pred chhhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCC-ceEEEE---EcCEEEEEcCCCCHHHHHHHHHHHHHHhhc
Confidence 889999999999999999996 89999999999 999976 4589999999875
Q ss_pred ------------------CCeEEEEeccCCHHHHHHHHHHHHHHHHHHHHHhcCCeEEecCCHHHHHHHHHHHHHhcCCC
Q 012157 369 ------------------PKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIE 430 (470)
Q Consensus 369 ------------------~~~~TIll~g~t~~~l~e~~~~l~dal~~~~~~~~~~~vv~GGG~~E~~l~~~L~~~~~~~~ 430 (470)
++++||+|||+|+.+++|.||+++||++++|+++++| +|||||++|++++.+|++++.+.+
T Consensus 354 ~~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~~~~ 432 (543)
T 1we3_A 354 TDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEG-IVPGGGVTLLRAISAVEELIKKLE 432 (543)
T ss_dssp CCSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHHHHHHHTTCC
T ss_pred cCchhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhccC-cCCCccHHHHHHHHHHHHHhhccC
Confidence 3789999999999999999999999999999999999 999999999999999999998888
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHhh
Q 012157 431 GIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQG 468 (470)
Q Consensus 431 ~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~ 468 (470)
+++|+++++|++||+.||++|++|||+|+.+++++|++
T Consensus 433 g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~ 470 (543)
T 1we3_A 433 GDEATGAKIVRRALEEPARQIAENAGYEGSVIVQQILA 470 (543)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999986
No 25
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=4.8e-84 Score=674.22 Aligned_cols=406 Identities=19% Similarity=0.296 Sum_probs=345.4
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhcCCCCccceeeecCCCCEEEecChHHHHhhccccCh----hHHHHHHHHhhhccc
Q 012157 13 KRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHP----AAKSMIELSRTQDEE 88 (470)
Q Consensus 13 ~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~hP----~a~ll~~~~~~~~~~ 88 (470)
+..+|.++|.+|+.||..++++|+|||||+||+|||+++.|+++|||||+||+++|+++|| +|+|++++|++|+++
T Consensus 5 ~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e 84 (545)
T 1iok_A 5 EVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDE 84 (545)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHGGGG
T ss_pred hhhccHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHHhhccc
Confidence 4678999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHhhcccccchHH
Q 012157 89 VGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGD 168 (470)
Q Consensus 89 ~GDGttt~vlL~~~ll~~~~~li~~gi~~~~I~~~~~~a~~~~~~~l~~~~~~v~~~~~~~l~~v~~t~l~sk~~~~~~~ 168 (470)
+||||||+++|+++||+++.+++++|+||..|++||+.|++.++++|+++++|++ +++.|.+++++++ ++++
T Consensus 85 ~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~--~~e~l~~va~iS~------~~~~ 156 (545)
T 1iok_A 85 AGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVN--DSSEVAQVGTISA------NGES 156 (545)
T ss_dssp CSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCC--STTTTTHHHHHTT------TTCH
T ss_pred cCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCC--CHHHHHHHHHhhc------CCch
Confidence 9999999999999999999999999999999999999999999999999999986 5678999998874 4689
Q ss_pred HHHHHHHHHHhhcccccCCCccccCcccceeEEEecCCCcCCc-ceeeeEEEecccCCCC------CCcceecCCeEEEE
Q 012157 169 LIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDS-RVLKGVMFNKDVVAPG------KMRRKIVNPRIILL 241 (470)
Q Consensus 169 ~l~~l~~~a~~~~~~~~~~g~~~~~~~~~I~i~~~~G~~~~~s-~li~Giv~~~~~~~~~------~~~~~~~~~kIll~ 241 (470)
++++++++|+.+++. ++. |+|+ +|+++++| ++++|++|+++|.++. .|+++++||+|+++
T Consensus 157 ~i~~li~dAv~~V~~---~g~--------I~Ve--~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~ 223 (545)
T 1iok_A 157 FIGQQIAEAMQRVGN---EGV--------ITVE--ENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLH 223 (545)
T ss_dssp HHHHHHHHHHHHHCT---TSC--------CCCE--ECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEEC
T ss_pred hHHHHHHHHHHHhcc---CCe--------EEEE--eCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEE
Confidence 999999999999975 332 6665 79999998 9999999999998852 47888999999999
Q ss_pred ecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCHHHHHHHHHcCC------eee---
Q 012157 242 DSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGV------SAI--- 312 (470)
Q Consensus 242 ~~~Le~~~~~~~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I------~vv--- 312 (470)
+++++ +++++ .++++++.+.|+||||++++|++.++++|..|+| +++
T Consensus 224 d~~I~-------------~~~~l-----------~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~ 279 (545)
T 1iok_A 224 EKKLS-------------SLQPM-----------VPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAP 279 (545)
T ss_dssp SSCBC-------------CCCC----------------------CCCCEEEESCBC-----------------CEEEECS
T ss_pred cCCcC-------------CHHHH-----------HHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecc
Confidence 99864 33343 3678889999999999999999999999999765 454
Q ss_pred --ecCCHhHHHHHHHHhCCeeccC-----CCCCCCCccCCccceEEEEEECCeEEEEEEecCCC----------------
Q 012157 313 --RRLRKTDNNRIAKACGAVIVNR-----PDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDP---------------- 369 (470)
Q Consensus 313 --~~v~~~~L~~ia~~tGa~i~s~-----~~~l~~~~lG~~~~~v~~~~~g~~~~~~~~~~~~~---------------- 369 (470)
+++++++|+|||++|||+++++ +++++++++|+ |+.|++ +.++|++|++|+++
T Consensus 280 ~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~-a~~v~~---~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~ 355 (545)
T 1iok_A 280 GFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGR-AKKVSI---NKDNTTIVDGAGEKAEIEARVSQIRQQIEE 355 (545)
T ss_dssp CCTTHHHHHHHHHHHHHTC---------------CTTSEE-EEEEEE---CSSCEEEESCCCCHHHHHHHHHHHHHHHTT
T ss_pred hhhhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCc-CcEEEE---ecCEEEEEeCCCCHHHHHHHHHHHHHHHhc
Confidence 4999999999999999999996 99999999999 999976 45899999998753
Q ss_pred -------------------CeEEEEeccCCHHHHHHHHHHHHHHHHHHHHHhcCCeEEecCCHHHHHHHHHHHHHhcCCC
Q 012157 370 -------------------KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIE 430 (470)
Q Consensus 370 -------------------~~~TIll~g~t~~~l~e~~~~l~dal~~~~~~~~~~~vv~GGG~~E~~l~~~L~~~~~~~~ 430 (470)
+++||+|||+|+.+++|.||+++||++++|+++++| +|||||++|++++.+|++++. .+
T Consensus 356 ~~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~-~~ 433 (545)
T 1iok_A 356 TTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEG-IVVGGGVALVQGAKVLEGLSG-AN 433 (545)
T ss_dssp CCCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHGGGGGSCCC-SS
T ss_pred cCchhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCchHHHHHHHHHHHHHhc-cC
Confidence 789999999999999999999999999999999999 999999999999999999877 78
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHhhc
Q 012157 431 GIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGK 469 (470)
Q Consensus 431 ~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~ 469 (470)
+++|+++++|++||+.||++|++|||+|+.+++++|++.
T Consensus 434 g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~ 472 (545)
T 1iok_A 434 SDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRES 472 (545)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSC
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhh
Confidence 899999999999999999999999999999999999863
No 26
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=9.5e-83 Score=662.08 Aligned_cols=404 Identities=23% Similarity=0.294 Sum_probs=307.1
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhcCCCCccceeeecCCCCEEEecChHHHHhhccccChh----HHHHHHHHhhhccc
Q 012157 13 KRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPA----AKSMIELSRTQDEE 88 (470)
Q Consensus 13 ~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~hP~----a~ll~~~~~~~~~~ 88 (470)
+..||.++|.+|+.||+.++++|++||||+||+|||+++.|+++|||||+|||++|+++||+ |+|++++|++|+++
T Consensus 4 ~~~~~~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~~qd~e 83 (546)
T 3rtk_A 4 TIAYDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDV 83 (546)
T ss_dssp ---------------------------------------------------------CCCHHHHHHHHHHHHHHTSCC--
T ss_pred eeeccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHHhhhhh
Confidence 36799999999999999999999999999999999999999999999999999999999998 99999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHhhcccccchHH
Q 012157 89 VGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGD 168 (470)
Q Consensus 89 ~GDGttt~vlL~~~ll~~~~~li~~gi~~~~I~~~~~~a~~~~~~~l~~~~~~v~~~~~~~l~~v~~t~l~sk~~~~~~~ 168 (470)
+||||||+++|+++||+++.+++++|+||..|++||+.|++.++++|+++++|++ +++.|.++++++++ ++
T Consensus 84 ~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~--~~e~L~~vA~iS~~-------~~ 154 (546)
T 3rtk_A 84 AGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVE--TKEQIAATAAISAG-------DQ 154 (546)
T ss_dssp -----CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCC--SHHHHHHHHHHHHT-------CH
T ss_pred hCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCC--ChHHHHhHeEEeCC-------ch
Confidence 9999999999999999999999999999999999999999999999999999987 68899999998853 57
Q ss_pred HHHHHHHHHHhhcccccCCCccccCcccceeEEEecCCCcCCcceeeeEEEecccCCC------CCCcceecCCeEEEEe
Q 012157 169 LIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAP------GKMRRKIVNPRIILLD 242 (470)
Q Consensus 169 ~l~~l~~~a~~~~~~~~~~g~~~~~~~~~I~i~~~~G~~~~~s~li~Giv~~~~~~~~------~~~~~~~~~~kIll~~ 242 (470)
++++++++|+.+++. +| .|+|.+.. +...+|++++|++|++++.|| ++|+++++||+|++++
T Consensus 155 ~i~~liadAv~~V~~---dg--------vI~Ve~~~-~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d 222 (546)
T 3rtk_A 155 SIGDLIAEAMDKVGN---EG--------VITVEESN-TFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVS 222 (546)
T ss_dssp HHHHHHHHHHHHSCT---TS--------EEEEECCS-SSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBS
T ss_pred HHHHHHHHHHHHhcc---CC--------ceEEEecC-CcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEEC
Confidence 899999999999975 34 27777543 345789999999999999886 2689999999999999
Q ss_pred cccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCHHHHHHHHHcC------Ceee----
Q 012157 243 SPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAG------VSAI---- 312 (470)
Q Consensus 243 ~~Le~~~~~~~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~------I~vv---- 312 (470)
+++ ++++++. ++++++.+.|+||||++++|++.++++|..|+ ++++
T Consensus 223 ~kI-------------s~~~~l~-----------~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~ 278 (546)
T 3rtk_A 223 SKV-------------STVKDLL-----------PLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPG 278 (546)
T ss_dssp SEE-------------CCSTTTH-----------HHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSS
T ss_pred Ccc-------------CCHHHHH-----------HHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEecccc
Confidence 974 4555543 67899999999999999999999999999764 3454
Q ss_pred -ecCCHhHHHHHHHHhCCeecc-----CCCCCCCCccCCccceEEEEEECCeEEEEEEecCCC-----------------
Q 012157 313 -RRLRKTDNNRIAKACGAVIVN-----RPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDP----------------- 369 (470)
Q Consensus 313 -~~v~~~~L~~ia~~tGa~i~s-----~~~~l~~~~lG~~~~~v~~~~~g~~~~~~~~~~~~~----------------- 369 (470)
++.++++|+|||++|||++++ +++++++++||+ |+.|+ ++++++++|++|.++
T Consensus 279 ~~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~-a~~v~---i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~ 354 (546)
T 3rtk_A 279 FGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGK-ARKVV---VTKDETTIVEGAGDTDAIAGRVAQIRQEIENS 354 (546)
T ss_dssp CHHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEE-EEEEE---ECSSCEEEEEECSCHHHHHHHHHHHHHHHHTC
T ss_pred ccccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCe-eEEEE---EcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhc
Confidence 455689999999999999999 689999999999 99997 477899999998753
Q ss_pred ------------------CeEEEEeccCCHHHHHHHHHHHHHHHHHHHHHhcCCeEEecCCHHHHHHHHHHHHHhcCCCC
Q 012157 370 ------------------KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEG 431 (470)
Q Consensus 370 ------------------~~~TIll~g~t~~~l~e~~~~l~dal~~~~~~~~~~~vv~GGG~~E~~l~~~L~~~~~~~~~ 431 (470)
.++||+|||+|+.+++|.||+++||++++|+++++| +|||||++|++++.+|++++ .++
T Consensus 355 ~s~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~g-iVpGGGa~e~~~s~~L~~~~--~~g 431 (546)
T 3rtk_A 355 DSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEG-IVAGGGVTLLQAAPTLDELK--LEG 431 (546)
T ss_dssp SCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHTTGGGSTTSC--CCT
T ss_pred cchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCC-cccCCcHHHHHHHHHHHHhc--ccc
Confidence 489999999999999999999999999999999999 99999999999999999887 789
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHhh
Q 012157 432 IEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQG 468 (470)
Q Consensus 432 ~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~ 468 (470)
++|+++++|++||+.||++|++|||+|+.+++++|++
T Consensus 432 ~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~ 468 (546)
T 3rtk_A 432 DEATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRN 468 (546)
T ss_dssp THHHHHHHHHHHTTHHHHHHHTTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 9999999999999999999999999999999999987
No 27
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=100.00 E-value=1.1e-37 Score=279.76 Aligned_cols=174 Identities=71% Similarity=1.154 Sum_probs=151.3
Q ss_pred cCCcceeeeEEEecccCCCCCCcceecCCeEEEEecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 012157 208 LEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKP 287 (470)
Q Consensus 208 ~~~s~li~Giv~~~~~~~~~~~~~~~~~~kIll~~~~Le~~~~~~~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~~~~ 287 (470)
++||++++|++|++++.++ +||+.++||||++++++|++++++.++++.++++++++.+.+.|++++++++++|++.|+
T Consensus 1 ~~dS~lv~Gvvl~k~~~~~-~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 79 (178)
T 1gml_A 1 MEDSCVLRGVMINKDVTHP-RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKP 79 (178)
T ss_dssp --CCSEEEEEEESCCCSST-TSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCcEEEEEEEEeccccCC-CCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 3689999999999999998 899999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCHHHHHHHHHcCCeeeecCCHhHHHHHHHHhCCeeccCCCCCCCCccCCccceEEEEEECCeEEEEEEecC
Q 012157 288 DLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCK 367 (470)
Q Consensus 288 ~lIi~~~~i~~~~l~~l~~~~I~vv~~v~~~~L~~ia~~tGa~i~s~~~~l~~~~lG~~~~~v~~~~~g~~~~~~~~~~~ 367 (470)
|||+++++|++.+++||.++||++++++++++|+|||++|||++++++++++++++|+.|+.|++.++|+++|++|++|+
T Consensus 80 nVVl~~k~I~d~a~~~l~k~gI~~vr~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~~v~~~~ig~~~~~~~~gc~ 159 (178)
T 1gml_A 80 DVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCK 159 (178)
T ss_dssp SEEEESSCBCHHHHHHHHHTTCEEECCCCHHHHHHHHHHHCCCEESCGGGCCGGGSBCCEEEEEEEEETTEEEEEEEEES
T ss_pred cEEEECCcccHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCeEeCChhhCChhhhCCcccEEEEEEECCeEEEEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999965899999999999999999999
Q ss_pred CCCeEEEEeccCCHH
Q 012157 368 DPKACTVLLRGASKD 382 (470)
Q Consensus 368 ~~~~~TIll~g~t~~ 382 (470)
+++.|||+|||++.+
T Consensus 160 ~~~~~TIllRG~~~~ 174 (178)
T 1gml_A 160 DPKACTILLRGASHH 174 (178)
T ss_dssp STTSCEEEEEC----
T ss_pred CCCEEEEEEECCCcc
Confidence 999999999999875
No 28
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=100.00 E-value=5.2e-33 Score=244.27 Aligned_cols=154 Identities=35% Similarity=0.590 Sum_probs=149.3
Q ss_pred eeeEEEecccCCCCCCcceecCCeEEEEecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEec
Q 012157 214 LKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITE 293 (470)
Q Consensus 214 i~Giv~~~~~~~~~~~~~~~~~~kIll~~~~Le~~~~~~~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~~~~~lIi~~ 293 (470)
++|++|++++.++ +||+.++||||++++++|++++++.++++.++++++++.+.+.|++++++++++|++.|+|||+++
T Consensus 1 i~Gvv~~k~~~~~-~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~ 79 (159)
T 1ass_A 1 MSGIVIDKEKVHS-KMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQ 79 (159)
T ss_dssp CCCEEESCCCSCT-TSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEES
T ss_pred CceEEEecccCCC-CCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEEEC
Confidence 5799999999998 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHcCCeeeecCCHhHHHHHHHHhCCeeccCCCCCCCCccCCccceEEEEEECCeEEEEEEecCCC
Q 012157 294 KGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDP 369 (470)
Q Consensus 294 ~~i~~~~l~~l~~~~I~vv~~v~~~~L~~ia~~tGa~i~s~~~~l~~~~lG~~~~~v~~~~~g~~~~~~~~~~~~~ 369 (470)
++|++.+++||.++||++++++++++|+|||++|||++++++++++++.+|+ |+.|++.++|+++|++|++|++.
T Consensus 80 k~I~d~a~~~l~k~gI~~v~~v~~~dleria~atGa~iv~~~~~l~~~~LG~-~~~v~e~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 80 KGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGE-AETVEERKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp SCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCCBSSTTSCCTTSCEE-EEEEEEEEETTEEEEEEESCC--
T ss_pred CccCHHHHHHHHHCCCEEEccCCHHHHHHHHHHhCCeeeCccccCCcccCcc-ceEEEEEEECCeEEEEEECCCCc
Confidence 9999999999999999999999999999999999999999999999999999 99999999999999999999754
No 29
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=99.34 E-value=1e-11 Score=108.93 Aligned_cols=145 Identities=19% Similarity=0.220 Sum_probs=113.4
Q ss_pred cceeeeEEEecccCCC------CCCcceecCCeEEEEecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHh
Q 012157 211 SRVLKGVMFNKDVVAP------GKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILK 284 (470)
Q Consensus 211 s~li~Giv~~~~~~~~------~~~~~~~~~~kIll~~~~Le~~~~~~~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~ 284 (470)
.++++|+.|+++|.+| ..|..+++||.|++.+.+ |++..++. ++++++.+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkK-------------Is~i~~il-----------P~LE~~~~ 57 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDK-------------ISSLPDLL-----------PLLEKVAG 57 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSE-------------ECCHHHHH-----------HHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCc-------------cCCHHHHH-----------HHHHHHHH
Confidence 4688999999999986 257788999999999988 56766654 78899999
Q ss_pred cCCcEEEecCCCCHHHHHHHHHc------CCeee-----ecCCHhHHHHHHHHhCCeecc-----CCCCCCCCccCCccc
Q 012157 285 FKPDLVITEKGLSDLACHYLSKA------GVSAI-----RRLRKTDNNRIAKACGAVIVN-----RPDELQESDVGTGAG 348 (470)
Q Consensus 285 ~~~~lIi~~~~i~~~~l~~l~~~------~I~vv-----~~v~~~~L~~ia~~tGa~i~s-----~~~~l~~~~lG~~~~ 348 (470)
.+.+++|++.+|+.+++..|.-| +++++ +.-++..|++||.+||+++++ .+++.+..+||+ |+
T Consensus 58 ~~kpLlIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~-a~ 136 (194)
T 3m6c_A 58 TGKPLLIVAEDVEGEALATLVVNAIRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGS-AR 136 (194)
T ss_dssp HTCCEEEEESEECHHHHHHHHHHHHHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEE-EE
T ss_pred hCCCeEEEecccccchhhhhhhhhccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCC-cc
Confidence 99999999999999999999876 34444 445689999999999999997 456778889998 98
Q ss_pred eEEEEEECCeEEEEEEecCCCCeEEEEecc-CCHHHHHHHHHHHHHHHH
Q 012157 349 LFEVKKIGDEFFAFIVDCKDPKACTVLLRG-ASKDLLNEVERNLQDAMS 396 (470)
Q Consensus 349 ~v~~~~~g~~~~~~~~~~~~~~~~TIll~g-~t~~~l~e~~~~l~dal~ 396 (470)
++.+.+ --|.++.| ++...++++-..+...+.
T Consensus 137 ~v~vtk----------------d~T~iv~G~g~~~~I~~Rv~qIr~~ie 169 (194)
T 3m6c_A 137 RVVVSK----------------DDTVIVDGGGTAEAVANRAKHLRAEID 169 (194)
T ss_dssp EEEECS----------------SCEEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred EEEEcC----------------CceEEecCCCCHHHHHHHHHHHHHHHH
Confidence 876542 23555544 566666666666665554
No 30
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=99.29 E-value=4.6e-11 Score=105.03 Aligned_cols=141 Identities=18% Similarity=0.286 Sum_probs=110.0
Q ss_pred eeEEEecccCCC------CCCcceecCCeEEEEecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 012157 215 KGVMFNKDVVAP------GKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPD 288 (470)
Q Consensus 215 ~Giv~~~~~~~~------~~~~~~~~~~kIll~~~~Le~~~~~~~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~~~~~ 288 (470)
+|+.|+++|.+| ..|..+++||.||+.+.+ |++..++. ++++++.+.+.+
T Consensus 13 ~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkK-------------Is~i~~il-----------P~LE~v~~~~rp 68 (201)
T 3osx_A 13 EGMQFDRGYLSPYFINKPESGSVELENPYILLVDKK-------------ISNIRELL-----------PVLEGVAKASKP 68 (201)
T ss_dssp CCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEE-------------ECCHHHHH-----------HHHHHHHTSSCC
T ss_pred cccEecCccCChheeecccCCEEEecCCeEEEEcCc-------------cCCHHHHH-----------HHHHHHHHhCCC
Confidence 499999999886 367778999999999998 56766654 788999999999
Q ss_pred EEEecCCCCHHHHHHHHHc------CCeeee-----cCCHhHHHHHHHHhCCeecc-----CCCCCCCCccCCccceEEE
Q 012157 289 LVITEKGLSDLACHYLSKA------GVSAIR-----RLRKTDNNRIAKACGAVIVN-----RPDELQESDVGTGAGLFEV 352 (470)
Q Consensus 289 lIi~~~~i~~~~l~~l~~~------~I~vv~-----~v~~~~L~~ia~~tGa~i~s-----~~~~l~~~~lG~~~~~v~~ 352 (470)
++|++.+|+.+++..|.-| ++++++ .-++..|++||.+||+++++ .+++.+..+||+ |+++.+
T Consensus 69 LlIIAEDvegEALatLvvNklrg~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~-a~~V~v 147 (201)
T 3osx_A 69 LVIIAEDVEGEALATLVVNNMRGIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQ-AKRVVI 147 (201)
T ss_dssp EEEEEEEECHHHHHHHHHHHHHTSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEE-EEEEEE
T ss_pred eEEEeccccchhhhHHHHhhccceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCC-ccEEEE
Confidence 9999999999999999876 344444 44588999999999999997 356777889998 988765
Q ss_pred EEECCeEEEEEEecCCCCeEEEEecc-CCHHHHHHHHHHHHHHHH
Q 012157 353 KKIGDEFFAFIVDCKDPKACTVLLRG-ASKDLLNEVERNLQDAMS 396 (470)
Q Consensus 353 ~~~g~~~~~~~~~~~~~~~~TIll~g-~t~~~l~e~~~~l~dal~ 396 (470)
.+ --|+++.| ++...++++...+...+.
T Consensus 148 tk----------------d~TtIv~G~G~~~~I~~Rv~qIr~qie 176 (201)
T 3osx_A 148 NK----------------DTTTIIDGVGEEGAIAARVTQIRQQIE 176 (201)
T ss_dssp CS----------------SCEEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred cC----------------CceEEecCCCCHHHHHHHHHHHHHHHH
Confidence 42 23555544 566666766666665554
No 31
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=99.26 E-value=7.4e-12 Score=104.69 Aligned_cols=113 Identities=19% Similarity=0.263 Sum_probs=93.8
Q ss_pred eEEEecccCCC------CCCcceecCCeEEEEecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcE
Q 012157 216 GVMFNKDVVAP------GKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDL 289 (470)
Q Consensus 216 Giv~~~~~~~~------~~~~~~~~~~kIll~~~~Le~~~~~~~~~~~i~~~~~l~~~~~~e~~~l~~~~~~i~~~~~~l 289 (470)
|+.|+++|.+| +.|..+++||.|++.+.+ |++.+++. ++++++.+.+.++
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkK-------------Is~i~~ll-----------P~LE~v~~~~~pL 56 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKK-------------VSNVRELL-----------PILEQVAQTGKPL 56 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSE-------------ECCHHHHH-----------HHHHHHHTTTCCE
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEeccc-------------ccCHHHHH-----------HHHHHHHHHCCCE
Confidence 78899999885 367788999999999988 56766654 7889999999999
Q ss_pred EEecCCCCHHHHHHHHHc------CCeee-----ecCCHhHHHHHHHHhCCeeccC-----CCCCCCCccCCccceEEEE
Q 012157 290 VITEKGLSDLACHYLSKA------GVSAI-----RRLRKTDNNRIAKACGAVIVNR-----PDELQESDVGTGAGLFEVK 353 (470)
Q Consensus 290 Ii~~~~i~~~~l~~l~~~------~I~vv-----~~v~~~~L~~ia~~tGa~i~s~-----~~~l~~~~lG~~~~~v~~~ 353 (470)
+|++.+|+.+++..|.-| +++++ +..++..|++||.+||+++++. +++.+.+++|+ |+++...
T Consensus 57 lIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~-a~~v~vt 135 (145)
T 1srv_A 57 LIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGR-AERVRIT 135 (145)
T ss_dssp EEEESEECHHHHHHHHHHHHTTSCCEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEE-EEEEEEC
T ss_pred EEEecccchhhhhhhhhhhhcccceEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCc-cCEEEEc
Confidence 999999999999999876 33444 4557899999999999999974 45667788998 9887754
No 32
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=70.61 E-value=10 Score=31.13 Aligned_cols=52 Identities=17% Similarity=0.169 Sum_probs=40.1
Q ss_pred HHHHHHhcCCcEEEecCCCCHHHHHHHHHcCCeeeecCCHhHHHHHHHHhCCe
Q 012157 278 LCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAV 330 (470)
Q Consensus 278 ~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~vv~~v~~~~L~~ia~~tGa~ 330 (470)
+.+.|.+.||++||+. .+.+.+.+.|.++||.++......--+.|.....++
T Consensus 68 ~a~~L~~~gv~vVI~g-~IG~~a~~~L~~~GI~v~~~~~g~i~eal~~~~~G~ 119 (136)
T 1o13_A 68 VPNFVKEKGAELVIVR-GIGRRAIAAFEAMGVKVIKGASGTVEEVVNQYLSGQ 119 (136)
T ss_dssp HHHHHHHTTCSEEECS-CCCHHHHHHHHHTTCEEECSCCSBHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEEC-CCCHHHHHHHHHCCCEEEecCCCCHHHHHHHHHhCC
Confidence 3456677899999997 799999999999999999876654445555555554
No 33
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=67.70 E-value=12 Score=29.76 Aligned_cols=53 Identities=21% Similarity=0.271 Sum_probs=40.4
Q ss_pred HHHHHHHhcCCcEEEecCCCCHHHHHHHHHcCCeeeecCCHhHHHHHHHHhCCe
Q 012157 277 NLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAV 330 (470)
Q Consensus 277 ~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~vv~~v~~~~L~~ia~~tGa~ 330 (470)
...+.|...|+++||+. .+.+.+...|.++||.++......--+.|.....+.
T Consensus 54 ~~~~~L~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~v~eal~~~~~g~ 106 (121)
T 2yx6_A 54 DLPNFIKDHGAKIVLTY-GIGRRAIEYFNSLGISVVTGVYGRISDVIKAFIGGK 106 (121)
T ss_dssp HHHHHHHHTTCCEEECS-BCCHHHHHHHHHTTCEEECSBCSBHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHcCC
Confidence 34556778899999997 699999999999999999865544445555555554
No 34
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=65.19 E-value=15 Score=29.41 Aligned_cols=52 Identities=13% Similarity=0.053 Sum_probs=39.6
Q ss_pred HHHHHHhcCCcEEEecCCCCHHHHHHHHHcCCeeeecCCHhHHHHHHHHhCCe
Q 012157 278 LCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAV 330 (470)
Q Consensus 278 ~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~vv~~v~~~~L~~ia~~tGa~ 330 (470)
..+.|...||++|+|. .+.+.+...|.++||.++......--+.|.....+.
T Consensus 57 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 108 (124)
T 1eo1_A 57 TAQIIANNGVKAVIAS-SPGPNAFEVLNELGIKIYRATGTSVEENLKLFTEGN 108 (124)
T ss_dssp HHHHHHHTTCCEEEEC-CSSHHHHHHHHHHTCEEEECCSCCHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEEC-CcCHHHHHHHHHCCCEEEEcCCCCHHHHHHHHHhCC
Confidence 3455678899999997 699999999999999999866544445555555554
No 35
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=63.34 E-value=14 Score=29.33 Aligned_cols=52 Identities=15% Similarity=0.125 Sum_probs=39.3
Q ss_pred HHHHHHhcCCcEEEecCCCCHHHHHHHHHcCCeeeecCCH-hHHHHHHHHhCCe
Q 012157 278 LCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRK-TDNNRIAKACGAV 330 (470)
Q Consensus 278 ~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~vv~~v~~-~~L~~ia~~tGa~ 330 (470)
..+.|...||++|+|. .+.+.+...|.++||.++..... .--+.|.....+.
T Consensus 59 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~g~~i~eal~~~~~g~ 111 (120)
T 2wfb_A 59 AAQVLAKSGAGVLLTG-YVGPKAFQALQAAGIKVGQDLEGLTVRQAVQRFLDGQ 111 (120)
T ss_dssp HHHHHHHHTEEEEECS-CCCHHHHHHHHHTTCEEECCCTTSBHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEEC-CCCHhHHHHHHHCCCEEEEcCCCCcHHHHHHHHHcCC
Confidence 4456667899999997 69999999999999999987654 4444555555443
No 36
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=56.70 E-value=24 Score=28.90 Aligned_cols=51 Identities=2% Similarity=0.036 Sum_probs=38.1
Q ss_pred HHHHHHhcCCcEEEecCCCCHHHHHHHHHcCCeeeecCCHhHHHHHHHHhCCe
Q 012157 278 LCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAV 330 (470)
Q Consensus 278 ~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~vv~~v~~~~L~~ia~~tGa~ 330 (470)
..+.|...||++|||. ++.+.+.+.|.+ ||.++......--+.+.....+.
T Consensus 71 ~~~~L~~~gv~~VI~g-~iG~~a~~~L~~-GI~v~~~~~~~veeal~~~~~G~ 121 (136)
T 2re2_A 71 MLKSALDHGANALVLS-EIGSPGFNFIKN-KMDVYIVPEMPVADALKLILEGK 121 (136)
T ss_dssp HHHHHHHTTCSEEEES-CCBHHHHHHHTT-TSEEEECCSCBHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEEC-CCCHhHHHHHHC-CCEEEEcCCCCHHHHHHHHHhCC
Confidence 4456667899999997 799999999999 99999876533344455555444
No 37
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=55.35 E-value=15 Score=28.91 Aligned_cols=51 Identities=18% Similarity=0.120 Sum_probs=39.3
Q ss_pred HHHHHhcCCcEEEecCCCCHHHHHHHHHcCCeeeecCCHhHHHHHHHHhCCe
Q 012157 279 CMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAV 330 (470)
Q Consensus 279 ~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~vv~~v~~~~L~~ia~~tGa~ 330 (470)
.+.|...|+++|++. .+.+.+.+.|.++||.++......--+.+.....+.
T Consensus 55 ~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 105 (116)
T 1rdu_A 55 VQSLVSKGVEYLIAS-NVGRNAFETLKAAGVKVYRFEGGTVQEAIDAFSEGR 105 (116)
T ss_dssp HHHHHTTTCCEEECS-SCCSSCHHHHHTTTCEEECCCSCBHHHHHHHHHTTC
T ss_pred HHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHhCC
Confidence 345678899999997 599999999999999999876554445555555554
No 38
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=45.55 E-value=52 Score=25.23 Aligned_cols=52 Identities=12% Similarity=0.096 Sum_probs=38.1
Q ss_pred HHHHHHHHhcCCcEEEecCCCCHHHHH----HHHHcCCeeeecCCHhHHHHHHHHhCCe
Q 012157 276 ENLCMQILKFKPDLVITEKGLSDLACH----YLSKAGVSAIRRLRKTDNNRIAKACGAV 330 (470)
Q Consensus 276 ~~~~~~i~~~~~~lIi~~~~i~~~~l~----~l~~~~I~vv~~v~~~~L~~ia~~tGa~ 330 (470)
++..+.|.+-.+.+|+.+.+.++.... ++...+|.++..-++.+ |..++|-.
T Consensus 25 ~~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~~s~~e---LG~A~Gk~ 80 (101)
T 3v7q_A 25 DLVIKEIRNARAKLVLLTEDASSNTAKKVTDKCNYYKVPYKKVESRAV---LGRSIGKE 80 (101)
T ss_dssp HHHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHTTCCEEEESCHHH---HHHHTTSS
T ss_pred hhhHHHHhcCceeEEEEeccccccchhhhcccccccCCCeeeechHHH---HHhhhCcc
Confidence 345566777789999999999986544 45678999888766655 56666664
No 39
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=44.10 E-value=61 Score=25.80 Aligned_cols=50 Identities=16% Similarity=0.066 Sum_probs=37.5
Q ss_pred HHHHHHHhcCCcEEEecCCCCHH-----HHHHHHHcCCeeeecCCHhHHHHHHHHhCC
Q 012157 277 NLCMQILKFKPDLVITEKGLSDL-----ACHYLSKAGVSAIRRLRKTDNNRIAKACGA 329 (470)
Q Consensus 277 ~~~~~i~~~~~~lIi~~~~i~~~-----~l~~l~~~~I~vv~~v~~~~L~~ia~~tGa 329 (470)
..++.|.+-.+.+|+++.+++|. +..+|.++||.++..-++.+ |..++|.
T Consensus 27 ~v~kai~~gkakLViiA~D~~~~~~~~~l~~lc~~~~VP~~~v~sk~e---LG~a~g~ 81 (121)
T 2lbw_A 27 EVVKALRKGEKGLVVIAGDIWPADVISHIPVLCEDHSVPYIFIPSKQD---LGAAGAT 81 (121)
T ss_dssp HHHHHHHHSCCCEEEECTTCSCTTHHHHHHHHHHHTCCCEEECCCHHH---HHHHHTC
T ss_pred HHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEEECCHHH---HHHHhCC
Confidence 45566777789999999999984 44677888999887767755 4556664
No 40
>2qtd_A Uncharacterized protein MJ0327; ribonuclease H-like motif fold, iron-molybdenum cofactor, ST genomics; HET: MSE PG4; 1.70A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 2kla_A
Probab=43.59 E-value=52 Score=25.19 Aligned_cols=49 Identities=14% Similarity=0.125 Sum_probs=36.8
Q ss_pred HHHHhcCCcEEEecCCCCHHHHHHHHHcCCeeeecCCHhHHHHHHHHhCCe
Q 012157 280 MQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAV 330 (470)
Q Consensus 280 ~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~vv~~v~~~~L~~ia~~tGa~ 330 (470)
+.+...||++|+|. ++.+.+.+.|.++ |.++.....+--+.+.....+.
T Consensus 50 ~~l~~~gv~~vi~~-~iG~~a~~~L~~~-I~v~~~~~~~v~eal~~~~~g~ 98 (105)
T 2qtd_A 50 KSIVKENVNAIICK-NISEENYKKFSKK-IEIYHAEGDDVDKNISLFIEGE 98 (105)
T ss_dssp HHHHHTCCSEEEES-CCCHHHHHHHHTT-CEEEECCSSCHHHHHHHHHTTC
T ss_pred HHHHHCCCCEEEEC-CCCHHHHHHHHhc-cEEEECCCCCHHHHHHHHHcCC
Confidence 44566899999996 7999999999999 9999866544444555554443
No 41
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=42.77 E-value=54 Score=25.11 Aligned_cols=52 Identities=12% Similarity=0.015 Sum_probs=37.5
Q ss_pred HHHHHHHHhcCCcEEEecCCCCHHHHH----HHHHcCCeeeecCCHhHHHHHHHHhCCe
Q 012157 276 ENLCMQILKFKPDLVITEKGLSDLACH----YLSKAGVSAIRRLRKTDNNRIAKACGAV 330 (470)
Q Consensus 276 ~~~~~~i~~~~~~lIi~~~~i~~~~l~----~l~~~~I~vv~~v~~~~L~~ia~~tGa~ 330 (470)
++..+.|.+-.+.+|+.+.+.++.... ++..++|.++..-++.+ +..++|-.
T Consensus 24 ~~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~~s~~e---LG~a~Gk~ 79 (101)
T 3on1_A 24 EQVVKAVQNGQVTLVILSSDAGIHTKKKLLDKCGSYQIPVKVVGNRQM---LGRAIGKH 79 (101)
T ss_dssp HHHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEESCHHH---HHHHTTSS
T ss_pred HHHHHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCHHH---HHHHhCCc
Confidence 345566777789999999999986554 45667999887766655 55666653
No 42
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=41.11 E-value=58 Score=23.87 Aligned_cols=50 Identities=16% Similarity=0.199 Sum_probs=36.4
Q ss_pred HHHHHHHhcCCcEEEecCCCCHHHHH----HHHHcCCeeeecCCHhHHHHHHHHhCC
Q 012157 277 NLCMQILKFKPDLVITEKGLSDLACH----YLSKAGVSAIRRLRKTDNNRIAKACGA 329 (470)
Q Consensus 277 ~~~~~i~~~~~~lIi~~~~i~~~~l~----~l~~~~I~vv~~v~~~~L~~ia~~tGa 329 (470)
+.++.+.+-.+.+|+.+.+.++.... ++.+++|.++..-++.+ |..++|-
T Consensus 18 ~v~kai~~gkaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~sk~e---LG~a~Gk 71 (82)
T 3v7e_A 18 QTVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVESMKK---LGKACGI 71 (82)
T ss_dssp HHHHHHTTTCEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEESCHHH---HHHHHTC
T ss_pred HHHHHHHcCCeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCHHH---HHHHhCC
Confidence 44556667779999999999987554 44678999887767755 5555565
No 43
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=40.40 E-value=62 Score=26.06 Aligned_cols=50 Identities=10% Similarity=0.099 Sum_probs=36.6
Q ss_pred HHHHHHHhcCCcEEEecCCCCH-----HHHHHHHHcCCeeeecCCHhHHHHHHHHhCC
Q 012157 277 NLCMQILKFKPDLVITEKGLSD-----LACHYLSKAGVSAIRRLRKTDNNRIAKACGA 329 (470)
Q Consensus 277 ~~~~~i~~~~~~lIi~~~~i~~-----~~l~~l~~~~I~vv~~v~~~~L~~ia~~tGa 329 (470)
..++.|.+-.+.+|+.+.+.+| .+..+|.+++|.++..-++. +|..++|-
T Consensus 31 ~v~Kai~~gka~LViiA~D~~p~~~~~~i~~lc~~~~Ip~~~v~sk~---~LG~a~G~ 85 (126)
T 2xzm_U 31 EVLRTIEAKQALFVCVAEDCDQGNYVKLVKALCAKNEIKYVSVPKRA---SLGEYLGH 85 (126)
T ss_dssp HHHHHHHHTCCSEEEEESSCCSTTHHHHHHHHHHHTTCCEEEESCSH---HHHHHHTC
T ss_pred HHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEECCHH---HHHHHHCC
Confidence 4455666778999999999975 45677888999988655554 46666664
No 44
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=40.05 E-value=79 Score=24.30 Aligned_cols=52 Identities=19% Similarity=0.213 Sum_probs=37.7
Q ss_pred HHHHHHHHhcCCcEEEecCCCCHHHHH----HHHHcCCeeee-cCCHhHHHHHHHHhCCe
Q 012157 276 ENLCMQILKFKPDLVITEKGLSDLACH----YLSKAGVSAIR-RLRKTDNNRIAKACGAV 330 (470)
Q Consensus 276 ~~~~~~i~~~~~~lIi~~~~i~~~~l~----~l~~~~I~vv~-~v~~~~L~~ia~~tGa~ 330 (470)
++.++.|.+-.+.+|+.+.+.++.... ++..++|.++. .-++.+ |..++|-.
T Consensus 28 ~~v~kai~~gkaklViiA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~e---LG~a~Gk~ 84 (104)
T 4a18_G 28 KSTIKAIRNGTAKLVFISNNCPTVRKSEIEYYASLAQISIHHFVGSNVE---LGTACGKY 84 (104)
T ss_dssp HHHHHHHHHTCCCEEEECTTSCHHHHHHHHHHHHHHTCEEEECSSCHHH---HHHHTTCS
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEecCCHHH---HHHHhCCc
Confidence 456667777789999999999985444 45567999985 566655 56666753
No 45
>2ooa_A E3 ubiquitin-protein ligase CBL-B; alpha-helical domain; 1.56A {Homo sapiens} PDB: 2oob_A 2jnh_A 2do6_A
Probab=37.54 E-value=68 Score=21.45 Aligned_cols=35 Identities=23% Similarity=0.281 Sum_probs=25.0
Q ss_pred HHHHHHHhcCCChHHHHHHHHHH---HHHHHHHHhhcc
Q 012157 105 HVAEEFIDKNYHPTVICRAYNKA---LEDAVAVLDKIA 139 (470)
Q Consensus 105 ~~~~~li~~gi~~~~I~~~~~~a---~~~~~~~l~~~~ 139 (470)
.+...|+..|+++..++++++.+ .+.|...|.+..
T Consensus 13 ~~Ia~Lm~mGFsr~~ai~AL~~a~nnve~AaniLlef~ 50 (52)
T 2ooa_A 13 AKIAKLMGEGYAFEEVKRALEIAQNNVEVARSILREFA 50 (52)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHTTTCHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHhCCCHHHHHHHHHHhc
Confidence 35677889999999999998876 344555554443
No 46
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=35.57 E-value=58 Score=30.48 Aligned_cols=51 Identities=18% Similarity=0.195 Sum_probs=39.5
Q ss_pred HHHHhcCCcEEEecCCCCHHHHHHHHHcCCeeeecC--C------------------------HhHHHHHHHHhCCe
Q 012157 280 MQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRL--R------------------------KTDNNRIAKACGAV 330 (470)
Q Consensus 280 ~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~vv~~v--~------------------------~~~L~~ia~~tGa~ 330 (470)
|+|..++++|||.....++...+.|.+.||.++.-- . .+.++.++.++|..
T Consensus 78 E~i~~l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~~~~~~~~~~~~~pt~~~~~~~~~~~~~~~i~~lg~~lg~e 154 (326)
T 3psh_A 78 ESLLALKPDVVFVTNYAPSEMIKQISDVNIPVVAISLRTGEVGEKGKLNPTLTDEDKAYNDGLKQGIELIAEVFEKK 154 (326)
T ss_dssp HHHHHTCCSEEEEETTCCHHHHHHHHTTTCCEEEECSCCSCGGGTTCSSCCCTTHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHccCCCEEEEeCCCChHHHHHHHHcCCCEEEEeccccccccccccccccccccchhhhhHHHHHHHHHHHcCCH
Confidence 578889999999876667788888999999776321 0 36788899999873
No 47
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=35.14 E-value=1e+02 Score=23.74 Aligned_cols=52 Identities=13% Similarity=0.132 Sum_probs=38.0
Q ss_pred HHHHHHHHhcCCcEEEecCCCCHHH----HHHHHHcCCeeee-cCCHhHHHHHHHHhCCe
Q 012157 276 ENLCMQILKFKPDLVITEKGLSDLA----CHYLSKAGVSAIR-RLRKTDNNRIAKACGAV 330 (470)
Q Consensus 276 ~~~~~~i~~~~~~lIi~~~~i~~~~----l~~l~~~~I~vv~-~v~~~~L~~ia~~tGa~ 330 (470)
++.++.|.+-.+.+||.+.+.++.. .+++..++|.++. .-++.+ |..++|-.
T Consensus 28 ~~v~kai~~gkaklVilA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~e---LG~A~Gk~ 84 (105)
T 3u5e_c 28 KSTVKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNE---LGTAVGKL 84 (105)
T ss_dssp HHHHHHHHTTCCSEEEECTTSCHHHHHHHHHHHHHHTCEEEECSSCHHH---HHHHTTCS
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCCHHH---HHHHhCCc
Confidence 4566677777899999999999865 4455677999995 555655 56677753
No 48
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=34.91 E-value=52 Score=26.86 Aligned_cols=51 Identities=10% Similarity=0.163 Sum_probs=36.4
Q ss_pred HHHHHHHHhcCCcEEEecCCCCHH-----HHHHHHHcCCeeeecCCHhHHHHHHHHhCC
Q 012157 276 ENLCMQILKFKPDLVITEKGLSDL-----ACHYLSKAGVSAIRRLRKTDNNRIAKACGA 329 (470)
Q Consensus 276 ~~~~~~i~~~~~~lIi~~~~i~~~-----~l~~l~~~~I~vv~~v~~~~L~~ia~~tGa 329 (470)
+..++.+.+-.+.+|+++.++++. +..+|.+.||.++..-++. +|..++|-
T Consensus 38 ~~v~kai~~gkakLViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~---eLG~a~G~ 93 (134)
T 2ale_A 38 NEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRV---ALGRACGV 93 (134)
T ss_dssp HHHHHHHHHTCEEEEEEETTCSSGGGGTHHHHHHHHHTCCEEEESCHH---HHHHHTTC
T ss_pred hHHHHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHHhcCCCEEEECCHH---HHHHHhCC
Confidence 455666667778999999999885 5567788899877665554 45555554
No 49
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=32.91 E-value=1e+02 Score=28.08 Aligned_cols=50 Identities=18% Similarity=0.300 Sum_probs=38.0
Q ss_pred HHHHhcCCcEEEecCCC-CHHHHHHHHHcCCeeeec---CC----HhHHHHHHHHhCC
Q 012157 280 MQILKFKPDLVITEKGL-SDLACHYLSKAGVSAIRR---LR----KTDNNRIAKACGA 329 (470)
Q Consensus 280 ~~i~~~~~~lIi~~~~i-~~~~l~~l~~~~I~vv~~---v~----~~~L~~ia~~tGa 329 (470)
|.|..++++|||..... ++...+.|.+.||.++.- -+ .+.++.++.++|.
T Consensus 53 E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~i~~lg~~~g~ 110 (283)
T 2r79_A 53 EGVLALRPDILIGTEEMGPPPVLKQLEGAGVRVETLSAKPDLEALESNLKKLGDWLGV 110 (283)
T ss_dssp HHHHTTCCSEEEECTTCCCHHHHHHHHHTTCCEEECCCCSSHHHHHHHHHHHHHHHTC
T ss_pred HHHHhcCCCEEEEeCccCcHHHHHHHHHcCCcEEEecCCCCHHHHHHHHHHHHHHhCC
Confidence 57889999999987643 577888899999876542 12 3678888888886
No 50
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=32.23 E-value=1.2e+02 Score=23.66 Aligned_cols=51 Identities=20% Similarity=0.227 Sum_probs=37.5
Q ss_pred HHHHHHHHhcCCcEEEecCCCCHHH----HHHHHHcCCeeeec-CCHhHHHHHHHHhCC
Q 012157 276 ENLCMQILKFKPDLVITEKGLSDLA----CHYLSKAGVSAIRR-LRKTDNNRIAKACGA 329 (470)
Q Consensus 276 ~~~~~~i~~~~~~lIi~~~~i~~~~----l~~l~~~~I~vv~~-v~~~~L~~ia~~tGa 329 (470)
++.++.|.+-.+.+||.+.+.++.. ..++..++|.++.. -+..+ |..++|-
T Consensus 32 ~~t~kai~~gkakLVilA~D~~~~~~~~i~~~c~~~~ipv~~~~~s~~e---LG~A~Gk 87 (112)
T 3iz5_f 32 KTVLKTLRSSLGKLIILANNCPPLRKSEIETYAMLAKISVHHFHGNNVD---LGTACGK 87 (112)
T ss_dssp HHHHHHHHTTCCSEEEECSCCCHHHHHHHHHHHHHTTCCEECCCCTTCT---HHHHHCT
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEeCCCHHH---HHHHhCC
Confidence 4566777778899999999999854 45567789988876 55655 4555565
No 51
>1xbi_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich fold, RNA binding protein/structural protein complex; HET: EPE; 1.45A {Methanocaldococcus jannaschii} SCOP: d.79.3.1 PDB: 1ra4_A* 1sds_A 3paf_A
Probab=30.94 E-value=86 Score=24.84 Aligned_cols=50 Identities=18% Similarity=0.131 Sum_probs=34.4
Q ss_pred HHHHHHHhcCCcEEEecCCCCHH-----HHHHHHHcCCeeeecCCHhHHHHHHHHhCC
Q 012157 277 NLCMQILKFKPDLVITEKGLSDL-----ACHYLSKAGVSAIRRLRKTDNNRIAKACGA 329 (470)
Q Consensus 277 ~~~~~i~~~~~~lIi~~~~i~~~-----~l~~l~~~~I~vv~~v~~~~L~~ia~~tGa 329 (470)
...+.|.+-.+.+|+.+.+++|. +..+|.+++|.++..-++.+| ..++|-
T Consensus 36 ~v~kai~~gka~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~eL---G~a~G~ 90 (120)
T 1xbi_A 36 EVTKAVERGIAKLVIIAEDVKPEEVVAHLPYLCEEKGIPYAYVASKQDL---GKAAGL 90 (120)
T ss_dssp HHHHHHHHTCCSEEEEESCCSSGGGTTTHHHHHHHHTCCEEEESCHHHH---HHHTTC
T ss_pred HHHHHHHcCCceEEEEcCCCChHHHHHHHHHHHHhcCCCEEEeCCHHHH---HHHhCC
Confidence 44556667778999999999774 345677788887766666554 444444
No 52
>2wi8_A Iron-uptake system-binding protein; bacillibactin and enterobactin binding, triscatecholate BIND protein, iron transport; 1.55A {Bacillus subtilis} PDB: 2why_A 2xuz_A* 2xv1_A* 2phz_A
Probab=29.91 E-value=96 Score=28.75 Aligned_cols=50 Identities=22% Similarity=0.335 Sum_probs=37.8
Q ss_pred HHHHhcCCcEEEecCCCCHHHHHHHHHcCCeeeecCC----HhHHHHHHHHhCC
Q 012157 280 MQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLR----KTDNNRIAKACGA 329 (470)
Q Consensus 280 ~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~vv~~v~----~~~L~~ia~~tGa 329 (470)
|+|..++++|||.....++...+.|.+.+..++-... .+.++.++.++|-
T Consensus 90 E~I~~l~PDLIi~~~~~~~~~~~~L~~~gp~v~~~~~~~~~~~~i~~lg~~lg~ 143 (311)
T 2wi8_A 90 EKILEMKPDVILASTKFPEKTLQKISTAGTTIPVSHISSNWKENMMLLAQLTGK 143 (311)
T ss_dssp HHHHHHCCSEEEEETTSCHHHHHHHHTTSCEEEECCCGGGHHHHHHHHHHHHTC
T ss_pred HHHHhCCCCEEEEcCccCHHHHHHHHhhCCEEEeeCCCcCHHHHHHHHHHHhCC
Confidence 5678889999998766788888889888865544322 3667888888886
No 53
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=29.61 E-value=55 Score=29.36 Aligned_cols=50 Identities=10% Similarity=0.129 Sum_probs=36.4
Q ss_pred HHHHhcCCcEEEecCCCCHHHHHHHHHcCCeeee--cCC----HhHHHHHHHHhCC
Q 012157 280 MQILKFKPDLVITEKGLSDLACHYLSKAGVSAIR--RLR----KTDNNRIAKACGA 329 (470)
Q Consensus 280 ~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~vv~--~v~----~~~L~~ia~~tGa 329 (470)
|.|..++++|||.....++...+.|.+.+|.++. .-+ .+.++.++.++|-
T Consensus 54 E~i~~l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~lg~~~g~ 109 (260)
T 2q8p_A 54 EAVKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFDSLKGMQKSITQLGDQFNR 109 (260)
T ss_dssp HHHHHTCCSEEEEEGGGHHHHHHHHHHHTSCCEEECCSSHHHHHHHHHHHHHHTTC
T ss_pred HHHHhcCCCEEEecCccCHHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 5678889999998766666777888888876542 212 2567778888886
No 54
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=28.70 E-value=96 Score=27.63 Aligned_cols=50 Identities=22% Similarity=0.264 Sum_probs=37.3
Q ss_pred HHHHhcCCcEEEecCC-CCHHHHHHHHHcCCeeeec--C--C----HhHHHHHHHHhCC
Q 012157 280 MQILKFKPDLVITEKG-LSDLACHYLSKAGVSAIRR--L--R----KTDNNRIAKACGA 329 (470)
Q Consensus 280 ~~i~~~~~~lIi~~~~-i~~~~l~~l~~~~I~vv~~--v--~----~~~L~~ia~~tGa 329 (470)
|+|..++++|||.... .++...+.|.+.+|.++.- . + .+.++.++.++|-
T Consensus 53 E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~~i~~lg~~~g~ 111 (256)
T 2r7a_A 53 EGILSLRPDSVITWQDAGPQIVLDQLRAQKVNVVTLPRVPATLEQMYANIRQLAKTLQV 111 (256)
T ss_dssp HHHHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECCCSCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHccCCCEEEEcCCCCCHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHHhCC
Confidence 6788999999998754 4677888899999866432 1 2 2467788888886
No 55
>1vq8_F 50S ribosomal protein L7AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.79.3.1 PDB: 1vq4_F* 1vq5_F* 1vq6_F* 1vq7_F* 1s72_F* 1vq9_F* 1vqk_F* 1vql_F* 1vqm_F* 1vqn_F* 1vqo_F* 1vqp_F* 1yhq_F* 1yi2_F* 1yij_F* 1yit_F* 1yj9_F* 1yjn_F* 1yjw_F* 2otj_F* ...
Probab=28.05 E-value=1.1e+02 Score=24.19 Aligned_cols=51 Identities=18% Similarity=0.194 Sum_probs=36.1
Q ss_pred HHHHHHHHhcCCcEEEecCCCCHH-----HHHHHHHcCCeeeecCCHhHHHHHHHHhCC
Q 012157 276 ENLCMQILKFKPDLVITEKGLSDL-----ACHYLSKAGVSAIRRLRKTDNNRIAKACGA 329 (470)
Q Consensus 276 ~~~~~~i~~~~~~lIi~~~~i~~~-----~l~~l~~~~I~vv~~v~~~~L~~ia~~tGa 329 (470)
++..+.|.+-.+.+|+.+.+.++. +..+|.+++|.++..-++.+ |..++|-
T Consensus 35 ~~v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~~~sk~e---LG~a~G~ 90 (120)
T 1vq8_F 35 NETTKSIERGSAELVFVAEDVQPEEIVMHIPELADEKGVPFIFVEQQDD---LGHAAGL 90 (120)
T ss_dssp HHHHHHHHHTCCSEEEEESCCSSGGGTTTHHHHHHTTCCCEEEESCHHH---HHHHTTC
T ss_pred HHHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHhcCCCEEEECCHHH---HHHHhCC
Confidence 455666667779999999999773 44677778998877766655 4455554
No 56
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=27.99 E-value=91 Score=25.33 Aligned_cols=52 Identities=12% Similarity=0.154 Sum_probs=37.1
Q ss_pred HHHHHHHHhcCCcEEEecCCCCHHHH-----HHHHHcCCeeeecCCHhHHHHHHHHhCCe
Q 012157 276 ENLCMQILKFKPDLVITEKGLSDLAC-----HYLSKAGVSAIRRLRKTDNNRIAKACGAV 330 (470)
Q Consensus 276 ~~~~~~i~~~~~~lIi~~~~i~~~~l-----~~l~~~~I~vv~~v~~~~L~~ia~~tGa~ 330 (470)
++..+.|.+-.+.+|+.+.+.++.-. .+|.+++|.++..-++.+ |..++|-.
T Consensus 47 ~~v~kal~~gkaklViiA~D~~~~~~~~~l~~lc~~~~IP~~~v~sk~e---LG~a~G~~ 103 (135)
T 2aif_A 47 NEATKALNRGIAEIVLLAADAEPLEILLHLPLVCEDKNTPYVFVRSKVA---LGRACGVS 103 (135)
T ss_dssp HHHHHHHHTTCEEEEEEETTCSCHHHHHHHHHHHHHTTCCEEEESCHHH---HHHHTTCS
T ss_pred HHHHHHHHcCCCeEEEEecCCChHHHHhHHHHHHHhcCCcEEEECCHHH---HHHHhCCC
Confidence 45566666777899999999988632 567778999887766644 55666653
No 57
>2fc3_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich, ribosome, RNA binding protein; 1.56A {Aeropyrum pernix} SCOP: d.79.3.1 PDB: 3pla_C* 3id5_C* 3hax_D* 2hvy_D* 3hay_D* 3nvi_B 3nmu_C 3nvk_E* 3lwr_C 3lwo_C* 3lwq_C* 3lwp_C 3lwv_C 3hjw_C* 2czw_A 1pxw_A
Probab=27.84 E-value=1.2e+02 Score=24.20 Aligned_cols=51 Identities=10% Similarity=0.044 Sum_probs=35.1
Q ss_pred HHHHHHHHhcCCcEEEecCCCCHH-----HHHHHHHcCCeeeecCCHhHHHHHHHHhCC
Q 012157 276 ENLCMQILKFKPDLVITEKGLSDL-----ACHYLSKAGVSAIRRLRKTDNNRIAKACGA 329 (470)
Q Consensus 276 ~~~~~~i~~~~~~lIi~~~~i~~~-----~l~~l~~~~I~vv~~v~~~~L~~ia~~tGa 329 (470)
++..+.|.+-.+.+|+.+.+.++. +..+|.+++|.++..-++.+| ..++|-
T Consensus 34 ~~v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~v~sk~eL---G~a~G~ 89 (124)
T 2fc3_A 34 NETTKAVERGLAKLVVIAEDVDPPEIVMHLPLLCDEKKIPYVYVPSKKRL---GEAAGI 89 (124)
T ss_dssp HHHHHHHHTTCCSEEEEETTCSSGGGTTTHHHHHHHTTCCEEEESCHHHH---HHHTTC
T ss_pred HHHHHHHHcCCceEEEEcCCCChHHHHHHHHHHHHHcCCCEEEECCHHHH---HHHhCC
Confidence 455666667779999999999763 345677788887776666554 444443
No 58
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=26.89 E-value=1.1e+02 Score=27.20 Aligned_cols=50 Identities=20% Similarity=0.280 Sum_probs=38.3
Q ss_pred HHHHhcCCcEEEecCCCC-HHHHHHHHHcCCeeeec---CC----HhHHHHHHHHhCC
Q 012157 280 MQILKFKPDLVITEKGLS-DLACHYLSKAGVSAIRR---LR----KTDNNRIAKACGA 329 (470)
Q Consensus 280 ~~i~~~~~~lIi~~~~i~-~~~l~~l~~~~I~vv~~---v~----~~~L~~ia~~tGa 329 (470)
|+|..+++++||...... +...+.|.+.||.++.- -+ .+.++.++.++|.
T Consensus 53 E~i~~l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~i~~lg~~~g~ 110 (255)
T 3md9_A 53 EGILAMKPTMLLVSELAQPSLVLTQIASSGVNVVTVPGQTTPESVAMKINAVATALHQ 110 (255)
T ss_dssp HHHHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECCCCSHHHHHHHHHHHHHHHTC
T ss_pred HHHHccCCCEEEEcCCcCchhHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 678899999999887654 56778899999877632 12 3567888889987
No 59
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=26.52 E-value=84 Score=29.77 Aligned_cols=50 Identities=12% Similarity=0.137 Sum_probs=34.1
Q ss_pred HHHHhcCCcEEEecCCCCHHHHHHHHHcCCeeeec-C--------C--HhHHHHHHHHhCC
Q 012157 280 MQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRR-L--------R--KTDNNRIAKACGA 329 (470)
Q Consensus 280 ~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~vv~~-v--------~--~~~L~~ia~~tGa 329 (470)
|.|..++|+|||....-.+...+.+...||.++.- . . .+.++.++.++|.
T Consensus 90 E~Ilal~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~~~~~~~~~~~~~~~i~~lG~~lG~ 150 (346)
T 2etv_A 90 ESLITLQPDVVFITYVDRXTAXDIQEXTGIPVVVLSYGNLGTFEDEDLFRSIELAGXILGR 150 (346)
T ss_dssp HHHHHHCCSEEEEESCCHHHHHHHHHHHTSCEEEECCCCTTCSCCHHHHHHHHHHHHHHTC
T ss_pred HHHhcCCCCEEEEeCCccchHHHHHHhcCCcEEEEecCccCcccHHHHHHHHHHHHHHcCC
Confidence 56778899999987543445666777878876532 1 1 3667778888876
No 60
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=26.49 E-value=91 Score=24.81 Aligned_cols=39 Identities=26% Similarity=0.305 Sum_probs=28.9
Q ss_pred HHHHHHHhcCCcEEEecCCC-CHHHHHHHHHcCCeeeecC
Q 012157 277 NLCMQILKFKPDLVITEKGL-SDLACHYLSKAGVSAIRRL 315 (470)
Q Consensus 277 ~~~~~i~~~~~~lIi~~~~i-~~~~l~~l~~~~I~vv~~v 315 (470)
+.++.+.+.|+..|+.+.++ ++.+.+.+.++||.+++++
T Consensus 73 ~~v~e~~~~g~k~v~~~~G~~~~e~~~~a~~~Girvv~nC 112 (122)
T 3ff4_A 73 SEYNYILSLKPKRVIFNPGTENEELEEILSENGIEPVIGC 112 (122)
T ss_dssp GGHHHHHHHCCSEEEECTTCCCHHHHHHHHHTTCEEEESC
T ss_pred HHHHHHHhcCCCEEEECCCCChHHHHHHHHHcCCeEECCc
Confidence 56677777787766666554 7788888888999888654
No 61
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=25.74 E-value=1.9e+02 Score=22.33 Aligned_cols=51 Identities=10% Similarity=0.210 Sum_probs=36.5
Q ss_pred HHHHHHHHhcCCcEEEecCCCCHHHHH----HHHHcCCeeeec-CCHhHHHHHHHHhCC
Q 012157 276 ENLCMQILKFKPDLVITEKGLSDLACH----YLSKAGVSAIRR-LRKTDNNRIAKACGA 329 (470)
Q Consensus 276 ~~~~~~i~~~~~~lIi~~~~i~~~~l~----~l~~~~I~vv~~-v~~~~L~~ia~~tGa 329 (470)
++..+.|.+-.+.+|+.+.+.++.... +|..++|.++.. -++.+ |..++|-
T Consensus 27 ~~v~kai~~gka~lViiA~D~~~~~~~~l~~~c~~~~Vp~~~~~~sk~e---LG~a~G~ 82 (110)
T 3cpq_A 27 KRTIKFVKHGEGKLVVLAGNIPKDLEEDVKYYAKLSNIPVYQHKITSLE---LGAVCGK 82 (110)
T ss_dssp HHHHHHHHTTCCSEEEECTTCBHHHHHHHHHHHHHTTCCEEECCSCHHH---HHHHTTC
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEcCCHHH---HHHHhCC
Confidence 455666777779999999999877665 456679988776 56654 5566665
No 62
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=25.59 E-value=82 Score=27.93 Aligned_cols=50 Identities=22% Similarity=0.288 Sum_probs=34.4
Q ss_pred HHHHhcCCcEEEecC-CCCHHHHHHHHHcCCeeeecC--C----HhHHHHHHHHhCC
Q 012157 280 MQILKFKPDLVITEK-GLSDLACHYLSKAGVSAIRRL--R----KTDNNRIAKACGA 329 (470)
Q Consensus 280 ~~i~~~~~~lIi~~~-~i~~~~l~~l~~~~I~vv~~v--~----~~~L~~ia~~tGa 329 (470)
|+|..++++|||... ..++...+.|.+.+|.++.-- + .+.++.++.++|.
T Consensus 51 E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~lg~~lg~ 107 (245)
T 1n2z_A 51 ERIVALKPDLVIAWRGGNAERQVDQLASLGIKVMWVDATSIEQIANALRQLAPWSPQ 107 (245)
T ss_dssp HHHHHTCCSEEEECTTTSCHHHHHHHHHHTCCEEECCCCSHHHHHHHHHHHGGGCSC
T ss_pred HHHhccCCCEEEEeCCCCcHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHHHHHHhCC
Confidence 578888999999863 567778888999898766321 1 2445555556654
No 63
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=24.84 E-value=1.3e+02 Score=23.84 Aligned_cols=51 Identities=20% Similarity=0.207 Sum_probs=36.5
Q ss_pred HHHHHHHHhcCCcEEEecCCCCHH-----HHHHHHHcCCeeeecCCHhHHHHHHHHhCC
Q 012157 276 ENLCMQILKFKPDLVITEKGLSDL-----ACHYLSKAGVSAIRRLRKTDNNRIAKACGA 329 (470)
Q Consensus 276 ~~~~~~i~~~~~~lIi~~~~i~~~-----~l~~l~~~~I~vv~~v~~~~L~~ia~~tGa 329 (470)
+...+.+.+-.+.+|+.+.+.++. +..+|.++||.++..-++.+ |..++|-
T Consensus 37 ~~v~kai~~gka~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~e---LG~a~Gk 92 (122)
T 3o85_A 37 NEALKQVNRGKAELVIIAADADPIEIVLHLPLACEDKGVPYVFIGSKNA---LGRACNV 92 (122)
T ss_dssp HHHHHHHHTTCCSEEEEETTCSSGGGGTTHHHHHHTTTCCEEEESCHHH---HHHHTTC
T ss_pred HHHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEECCHHH---HHHHhCC
Confidence 455666677779999999999763 34567888998777666655 4555555
No 64
>1rlg_A 50S ribosomal protein L7AE; protein-RNA, structural protein/RNA complex; HET: 5BU; 2.70A {Archaeoglobus fulgidus} SCOP: d.79.3.1
Probab=24.58 E-value=1e+02 Score=24.35 Aligned_cols=51 Identities=16% Similarity=0.116 Sum_probs=34.6
Q ss_pred HHHHHHHHhcCCcEEEecCCCCHH-----HHHHHHHcCCeeeecCCHhHHHHHHHHhCC
Q 012157 276 ENLCMQILKFKPDLVITEKGLSDL-----ACHYLSKAGVSAIRRLRKTDNNRIAKACGA 329 (470)
Q Consensus 276 ~~~~~~i~~~~~~lIi~~~~i~~~-----~l~~l~~~~I~vv~~v~~~~L~~ia~~tGa 329 (470)
++..+.|.+-.+.+|+.+.+.+|. +..+|.+++|.++..-++.+ |..++|-
T Consensus 33 ~~v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~~~sk~e---LG~a~G~ 88 (119)
T 1rlg_A 33 NETTKAVERGLAKLVYIAEDVDPPEIVAHLPLLCEEKNVPYIYVKSKND---LGRAVGI 88 (119)
T ss_dssp HHHHHHHTTTCCSEEEEESCCSCSTTTTHHHHHHHHHTCCEEEESCHHH---HHHHTTC
T ss_pred HHHHHHHHcCCCcEEEEeCCCChHHHHHHHHHHHHHcCCCEEEeCCHHH---HHHHhCC
Confidence 455566666778999999998763 44567777888776666655 4444444
No 65
>1p90_A NAFY protein, hypothetical protein; ribonuclease H motif, protein binding; 1.80A {Azotobacter vinelandii} SCOP: c.55.5.2
Probab=21.76 E-value=1.4e+02 Score=24.36 Aligned_cols=30 Identities=10% Similarity=0.221 Sum_probs=26.9
Q ss_pred cCCcEEEecCCCCHHHHHHHHHcCCeeeecC
Q 012157 285 FKPDLVITEKGLSDLACHYLSKAGVSAIRRL 315 (470)
Q Consensus 285 ~~~~lIi~~~~i~~~~l~~l~~~~I~vv~~v 315 (470)
.||++|||. ++.+.+...|.++||-++...
T Consensus 66 ~g~~vvi~~-~iG~~a~~~L~~~GI~v~~~~ 95 (145)
T 1p90_A 66 QDCQVLYVV-SIGGPAAAKVVRAGIHPLKKP 95 (145)
T ss_dssp TTCSEEEES-BCCHHHHHHHHHTTCEEEECT
T ss_pred CCCCEEEEC-CCCHHHHHHHHHcCCEEEEeC
Confidence 489999996 799999999999999998763
No 66
>2pw9_A Putative formate dehydrogenase accessory protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Desulfotalea psychrophila LSV54} SCOP: c.97.1.5
Probab=20.57 E-value=80 Score=29.07 Aligned_cols=40 Identities=10% Similarity=0.274 Sum_probs=33.6
Q ss_pred HHHHHHHhcCCcEEEecCCCCHHHHHHHHHcCCeeeecCC
Q 012157 277 NLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLR 316 (470)
Q Consensus 277 ~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~vv~~v~ 316 (470)
+++++....|++++++-..-...+.++..+.||..++.++
T Consensus 206 EmV~Kaa~aGIpvlvS~SApTslAV~lA~~~giTLiGf~R 245 (268)
T 2pw9_A 206 DMVLKCARIGIPIIMSRTSPSSLGLALAKRSGATLVAYSR 245 (268)
T ss_dssp HHHHHHHHHTCCEEEESSCBCHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHcCCCEEEEcccccHHHHHHHHHcCCEEEEEec
Confidence 4667888889999999888899999999999998887665
No 67
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=20.55 E-value=1.3e+02 Score=28.09 Aligned_cols=50 Identities=14% Similarity=0.106 Sum_probs=36.0
Q ss_pred HHHHHhcCCcEEEecCCCCHHHHHHHHHcCCeeeecC--C----HhHHHHHHHHhCC
Q 012157 279 CMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRL--R----KTDNNRIAKACGA 329 (470)
Q Consensus 279 ~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~vv~~v--~----~~~L~~ia~~tGa 329 (470)
+|.|..++++|||.... .+...+.|.+.||.++.-- . .+.++.++.++|-
T Consensus 109 ~E~i~al~PDLIi~~~~-~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~lg~~lg~ 164 (335)
T 4hn9_A 109 TEACVAATPDVVFLPMK-LKKTADTLESLGIKAVVVNPEDQSLLEECITLVGKITNN 164 (335)
T ss_dssp HHHHHHTCCSEEEEEGG-GHHHHHHHHHTTCCEEEECCCSHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhcCCCEEEEeCc-chhHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHHcCC
Confidence 46788899999998765 5667778888888765321 1 3567777777776
No 68
>2zkr_f 60S ribosomal protein L7A; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=20.46 E-value=1.8e+02 Score=26.54 Aligned_cols=50 Identities=14% Similarity=0.103 Sum_probs=37.0
Q ss_pred HHHHHHHhcCCcEEEecCCCCH-----HHHHHHHHcCCeeeecCCHhHHHHHHHHhCC
Q 012157 277 NLCMQILKFKPDLVITEKGLSD-----LACHYLSKAGVSAIRRLRKTDNNRIAKACGA 329 (470)
Q Consensus 277 ~~~~~i~~~~~~lIi~~~~i~~-----~~l~~l~~~~I~vv~~v~~~~L~~ia~~tGa 329 (470)
..+..|.+-.+.+||++.++++ .+..+|.++||.++..-+..+ |..++|-
T Consensus 142 eV~KaIekgkAkLVIIA~DasP~ei~~~Lp~LC~~~~VPyi~v~sk~e---LG~A~Gk 196 (266)
T 2zkr_f 142 TVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKAR---LGHLVHR 196 (266)
T ss_dssp HHHHHHHTTCCSEEEEESCCSSSTTTTHHHHHHHHHTCCEEEESCHHH---HHHHHTS
T ss_pred HHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCEEEECCHHH---HHHHhCC
Confidence 4556666777999999999988 355788999999877766655 4555554
No 69
>3jyw_G 60S ribosomal protein L8(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_G
Probab=20.28 E-value=1.1e+02 Score=24.15 Aligned_cols=50 Identities=16% Similarity=0.117 Sum_probs=35.7
Q ss_pred HHHHHHhcCCcEEEecCCCCHH-----HHHHHHHcCCeeeecCCHhHHHHHHHHhCCe
Q 012157 278 LCMQILKFKPDLVITEKGLSDL-----ACHYLSKAGVSAIRRLRKTDNNRIAKACGAV 330 (470)
Q Consensus 278 ~~~~i~~~~~~lIi~~~~i~~~-----~l~~l~~~~I~vv~~v~~~~L~~ia~~tGa~ 330 (470)
....+.+..+.+|+++.+++|. +..+|.++||.++.--++.+ |..++|-.
T Consensus 33 v~kaI~~gka~LVvIA~D~~p~~i~~~l~~lC~~~~VP~~~v~sk~~---LG~a~G~k 87 (113)
T 3jyw_G 33 VVALIENKKAKLVLIANDVDPIELVVFLPALCKKMGVPYAIVKGKAR---LGTLVNQK 87 (113)
T ss_dssp HHHTTTTTCCSEEEECSCCSSHHHHTTHHHHHHHTTCCCEECSCSTT---THHHHCSS
T ss_pred HHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCEEEECCHHH---HHHHHCCC
Confidence 3455566779999999999873 23567889998886666644 55666664
Done!