Query 012159
Match_columns 470
No_of_seqs 628 out of 3173
Neff 10.4
Searched_HMMs 46136
Date Thu Mar 28 23:40:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012159.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012159hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2271 UhpC Sugar phosphate p 100.0 8E-35 1.7E-39 266.8 24.4 345 112-462 27-438 (448)
2 COG2814 AraJ Arabinose efflux 100.0 2.4E-33 5.1E-38 261.2 32.4 325 112-462 11-390 (394)
3 PRK09556 uhpT sugar phosphate 100.0 3.4E-33 7.3E-38 278.2 25.5 338 112-452 27-443 (467)
4 TIGR00894 2A0114euk Na(+)-depe 100.0 6.1E-32 1.3E-36 269.5 33.5 357 108-469 13-460 (465)
5 TIGR02332 HpaX 4-hydroxyphenyl 100.0 4.7E-32 1E-36 265.3 29.2 291 111-404 5-311 (412)
6 PRK11663 regulatory protein Uh 100.0 3.3E-31 7.1E-36 261.5 34.4 342 112-459 21-425 (434)
7 KOG2532 Permease of the major 100.0 1.5E-31 3.2E-36 260.0 31.3 322 142-469 66-457 (466)
8 PRK03545 putative arabinose tr 100.0 4.2E-31 9E-36 257.5 33.6 316 112-454 7-376 (390)
9 PRK09705 cynX putative cyanate 100.0 4.5E-31 9.8E-36 257.0 33.8 329 112-469 8-392 (393)
10 TIGR00893 2A0114 d-galactonate 100.0 4.4E-31 9.5E-36 257.8 31.7 330 123-453 3-394 (399)
11 PRK03699 putative transporter; 100.0 2E-30 4.3E-35 252.9 34.0 328 111-464 4-387 (394)
12 PRK10091 MFS transport protein 100.0 4.3E-30 9.3E-35 249.5 31.7 312 114-452 3-370 (382)
13 TIGR01299 synapt_SV2 synaptic 100.0 5.6E-30 1.2E-34 261.5 32.9 186 109-295 162-360 (742)
14 PRK11551 putative 3-hydroxyphe 100.0 2E-29 4.4E-34 247.2 35.3 326 111-458 12-396 (406)
15 PLN00028 nitrate transmembrane 100.0 2.9E-29 6.2E-34 249.9 36.5 276 112-402 34-318 (476)
16 COG2223 NarK Nitrate/nitrite t 100.0 4.2E-30 9E-35 236.5 27.9 327 112-461 12-404 (417)
17 PRK14995 methyl viologen resis 100.0 1.7E-29 3.7E-34 253.1 33.4 292 112-406 4-329 (495)
18 PRK15034 nitrate/nitrite trans 100.0 3.8E-29 8.2E-34 241.5 32.9 322 112-462 32-458 (462)
19 PRK10213 nepI ribonucleoside t 100.0 2.3E-28 5E-33 237.9 36.7 297 112-435 18-369 (394)
20 TIGR00891 2A0112 putative sial 100.0 4.3E-29 9.3E-34 244.8 31.6 296 110-407 8-309 (405)
21 PRK10406 alpha-ketoglutarate t 100.0 2.5E-28 5.3E-33 241.0 36.3 273 112-407 20-314 (432)
22 PRK12307 putative sialic acid 100.0 7.1E-29 1.5E-33 244.9 31.5 311 112-435 16-386 (426)
23 PRK11273 glpT sn-glycerol-3-ph 100.0 1E-28 2.2E-33 245.1 32.1 330 113-448 28-425 (452)
24 PRK15402 multidrug efflux syst 100.0 3.6E-28 7.8E-33 238.2 35.3 309 112-441 11-379 (406)
25 TIGR00890 2A0111 Oxalate/Forma 100.0 1.8E-28 3.8E-33 237.9 30.1 265 122-407 11-275 (377)
26 TIGR00710 efflux_Bcr_CflA drug 100.0 3.8E-28 8.1E-33 236.5 32.0 272 113-406 4-276 (385)
27 PRK10642 proline/glycine betai 100.0 7.7E-28 1.7E-32 241.0 34.7 282 113-406 15-320 (490)
28 TIGR00903 2A0129 major facilit 100.0 4.2E-28 9E-33 232.8 30.5 251 125-402 2-253 (368)
29 TIGR00712 glpT glycerol-3-phos 100.0 3.4E-28 7.4E-33 240.4 30.8 288 112-402 25-317 (438)
30 TIGR00897 2A0118 polyol permea 100.0 2E-27 4.3E-32 232.3 33.9 317 114-449 13-392 (402)
31 TIGR00892 2A0113 monocarboxyla 100.0 5.7E-28 1.2E-32 239.4 30.2 334 112-449 17-412 (455)
32 PRK10504 putative transporter; 100.0 4.6E-27 1E-31 235.0 36.2 318 114-434 10-417 (471)
33 PRK10473 multidrug efflux syst 100.0 4E-27 8.7E-32 229.8 34.7 271 114-407 3-274 (392)
34 TIGR00881 2A0104 phosphoglycer 100.0 2.6E-28 5.7E-33 236.8 25.3 279 122-403 3-283 (379)
35 PRK10133 L-fucose transporter; 100.0 5.5E-27 1.2E-31 230.7 34.9 276 113-406 25-329 (438)
36 TIGR00900 2A0121 H+ Antiporter 100.0 1.4E-27 3.1E-32 230.5 29.9 273 119-406 4-281 (365)
37 PRK03633 putative MFS family t 100.0 7.4E-27 1.6E-31 226.8 34.3 305 114-448 6-362 (381)
38 PRK15075 citrate-proton sympor 100.0 7.8E-27 1.7E-31 230.4 34.8 273 112-406 13-308 (434)
39 KOG2533 Permease of the major 100.0 1E-28 2.3E-33 240.5 20.9 286 113-399 44-336 (495)
40 TIGR00711 efflux_EmrB drug res 100.0 2.9E-27 6.2E-32 237.6 31.7 287 114-403 2-322 (485)
41 PRK15403 multidrug efflux syst 100.0 5.6E-27 1.2E-31 229.5 32.7 262 117-399 19-281 (413)
42 PRK09952 shikimate transporter 100.0 1.8E-26 4E-31 227.7 36.3 277 111-406 19-320 (438)
43 TIGR00899 2A0120 sugar efflux 100.0 1.4E-26 3.1E-31 224.6 33.2 302 121-448 4-364 (375)
44 PRK05122 major facilitator sup 100.0 1.6E-26 3.5E-31 226.0 33.9 309 114-455 15-386 (399)
45 PRK03893 putative sialic acid 100.0 1.1E-26 2.3E-31 234.0 33.4 324 111-435 17-431 (496)
46 PRK10489 enterobactin exporter 100.0 2.2E-27 4.8E-32 233.4 27.7 321 119-460 22-401 (417)
47 TIGR00885 fucP L-fucose:H+ sym 100.0 1.8E-26 3.9E-31 225.1 32.7 308 116-444 5-398 (410)
48 PRK11652 emrD multidrug resist 100.0 4E-26 8.7E-31 222.9 34.3 266 112-401 6-272 (394)
49 TIGR00879 SP MFS transporter, 100.0 8.3E-27 1.8E-31 233.6 30.2 343 115-459 29-471 (481)
50 PRK11043 putative transporter; 100.0 4.3E-26 9.3E-31 223.2 33.5 263 116-404 8-270 (401)
51 PF07690 MFS_1: Major Facilita 100.0 1.4E-27 3.1E-32 229.4 22.1 269 120-403 2-274 (352)
52 PRK11102 bicyclomycin/multidru 100.0 3.5E-26 7.6E-31 222.0 31.3 259 128-406 5-264 (377)
53 PRK12382 putative transporter; 100.0 7E-26 1.5E-30 221.0 33.4 307 115-454 16-385 (392)
54 TIGR00886 2A0108 nitrite extru 100.0 5E-26 1.1E-30 220.0 31.5 276 117-404 4-293 (366)
55 PRK09874 drug efflux system pr 100.0 1.4E-25 3E-30 220.2 34.8 320 115-458 15-398 (408)
56 PRK11195 lysophospholipid tran 100.0 1.1E-25 2.3E-30 219.1 32.9 268 118-405 7-274 (393)
57 TIGR00895 2A0115 benzoate tran 100.0 3.5E-26 7.6E-31 223.5 28.2 289 112-403 15-316 (398)
58 PRK10077 xylE D-xylose transpo 100.0 1.1E-25 2.5E-30 225.6 32.5 295 112-407 10-341 (479)
59 TIGR00902 2A0127 phenyl propri 100.0 2.1E-25 4.7E-30 216.5 33.3 305 119-448 9-369 (382)
60 PRK11646 multidrug resistance 100.0 1.8E-25 3.9E-30 218.0 31.6 308 120-454 16-384 (400)
61 TIGR00896 CynX cyanate transpo 100.0 5.2E-26 1.1E-30 218.9 27.0 247 129-403 15-263 (355)
62 cd06174 MFS The Major Facilita 99.9 6.5E-25 1.4E-29 210.6 32.8 286 118-450 3-344 (352)
63 PRK10054 putative transporter; 99.9 1.6E-25 3.4E-30 218.1 28.8 295 116-436 9-363 (395)
64 PRK11010 ampG muropeptide tran 99.9 5.9E-25 1.3E-29 219.4 33.5 317 117-455 15-400 (491)
65 COG2807 CynX Cyanate permease 99.9 6.7E-25 1.5E-29 197.7 29.8 307 128-462 26-389 (395)
66 TIGR00887 2A0109 phosphate:H+ 99.9 4.2E-25 9.2E-30 222.0 31.2 322 111-433 13-455 (502)
67 KOG1330 Sugar transporter/spin 99.9 7.9E-27 1.7E-31 216.5 15.8 279 112-402 31-313 (493)
68 PRK15011 sugar efflux transpor 99.9 3E-24 6.6E-29 209.3 34.8 299 118-445 19-378 (393)
69 COG0738 FucP Fucose permease [ 99.9 9.2E-25 2E-29 199.9 28.4 307 114-440 13-392 (422)
70 PRK11128 putative 3-phenylprop 99.9 1.9E-24 4E-29 210.0 32.3 259 123-407 13-275 (382)
71 KOG2504 Monocarboxylate transp 99.9 3E-25 6.4E-30 218.7 26.0 345 112-458 44-476 (509)
72 PRK11902 ampG muropeptide tran 99.9 2.4E-24 5.1E-29 210.8 32.2 267 119-406 4-280 (402)
73 TIGR00805 oat sodium-independe 99.9 4.4E-26 9.6E-31 232.4 19.4 286 117-402 36-397 (633)
74 TIGR00883 2A0106 metabolite-pr 99.9 2E-24 4.4E-29 210.7 28.6 262 124-406 3-289 (394)
75 TIGR00898 2A0119 cation transp 99.9 1.5E-24 3.2E-29 218.8 26.9 285 135-427 110-467 (505)
76 PRK09528 lacY galactoside perm 99.9 5.9E-24 1.3E-28 209.3 29.2 324 118-459 14-404 (420)
77 PF05977 MFS_3: Transmembrane 99.9 1.3E-23 2.8E-28 208.2 31.0 318 114-450 10-386 (524)
78 TIGR00882 2A0105 oligosacchari 99.9 3.4E-23 7.3E-28 202.3 32.8 317 116-450 4-387 (396)
79 PRK06814 acylglycerophosphoeth 99.9 1.7E-23 3.8E-28 230.7 33.2 273 115-403 16-292 (1140)
80 KOG3764 Vesicular amine transp 99.9 9.2E-25 2E-29 198.3 14.9 292 141-457 98-453 (464)
81 TIGR00901 2A0125 AmpG-related 99.9 1.5E-22 3.2E-27 195.0 28.0 253 131-404 5-277 (356)
82 TIGR00889 2A0110 nucleoside tr 99.9 2.4E-22 5.2E-27 196.9 29.7 321 119-466 7-410 (418)
83 PRK08633 2-acyl-glycerophospho 99.9 3.6E-22 7.7E-27 221.0 33.8 273 121-407 16-304 (1146)
84 TIGR02718 sider_RhtX_FptX side 99.9 1.2E-21 2.7E-26 190.9 31.4 268 116-406 3-278 (390)
85 TIGR00924 yjdL_sub1_fam amino 99.9 3.4E-20 7.3E-25 184.3 34.6 288 114-402 10-342 (475)
86 PRK10207 dipeptide/tripeptide 99.9 3.4E-20 7.4E-25 184.3 33.8 287 114-403 14-340 (489)
87 TIGR00806 rfc RFC reduced fola 99.9 2.3E-20 4.9E-25 177.2 28.7 278 117-399 30-325 (511)
88 TIGR00792 gph sugar (Glycoside 99.9 1.8E-20 3.9E-25 185.7 24.3 260 128-407 13-292 (437)
89 KOG0569 Permease of the major 99.9 2.5E-19 5.5E-24 172.6 29.6 256 151-407 62-340 (485)
90 PF06609 TRI12: Fungal trichot 99.9 9.9E-19 2.1E-23 172.8 33.0 282 120-405 50-382 (599)
91 KOG0254 Predicted transporter 99.9 1.1E-19 2.4E-24 182.9 27.0 271 150-430 90-380 (513)
92 KOG2615 Permease of the major 99.9 2.5E-20 5.4E-25 168.7 19.4 293 142-442 61-424 (451)
93 KOG0253 Synaptic vesicle trans 99.9 3.2E-19 7E-24 160.4 26.0 341 111-457 75-518 (528)
94 PF01306 LacY_symp: LacY proto 99.9 3.1E-19 6.8E-24 168.7 25.4 334 114-465 7-407 (412)
95 PF03825 Nuc_H_symport: Nucleo 99.9 2.3E-18 5.1E-23 165.9 31.5 295 119-435 7-367 (400)
96 PRK09584 tppB putative tripept 99.8 7.3E-18 1.6E-22 168.6 33.0 168 116-283 23-194 (500)
97 KOG4686 Predicted sugar transp 99.8 1.4E-20 3E-25 163.2 8.8 310 113-437 43-419 (459)
98 KOG0255 Synaptic vesicle trans 99.8 2.4E-18 5.3E-23 174.1 24.8 279 141-434 110-405 (521)
99 PTZ00207 hypothetical protein; 99.8 2.3E-17 5E-22 164.3 28.7 287 112-403 26-422 (591)
100 TIGR00788 fbt folate/biopterin 99.8 1.1E-17 2.5E-22 165.8 24.5 312 114-434 26-415 (468)
101 TIGR01301 GPH_sucrose GPH fami 99.8 2.7E-16 5.7E-21 153.6 31.7 276 113-401 4-334 (477)
102 PF11700 ATG22: Vacuole efflux 99.8 5.5E-16 1.2E-20 152.4 33.8 295 150-457 71-467 (477)
103 PRK15462 dipeptide/tripeptide 99.8 1.4E-15 3.1E-20 149.1 36.1 174 114-287 9-186 (493)
104 KOG2563 Permease of the major 99.8 8.8E-17 1.9E-21 149.5 24.3 313 105-434 36-423 (480)
105 PRK09669 putative symporter Ya 99.8 5.2E-17 1.1E-21 161.0 24.0 254 131-407 26-299 (444)
106 TIGR01272 gluP glucose/galacto 99.8 8.6E-17 1.9E-21 150.8 23.1 216 199-434 6-292 (310)
107 KOG0252 Inorganic phosphate tr 99.8 6.2E-18 1.3E-22 157.0 12.3 319 112-431 39-467 (538)
108 PF13347 MFS_2: MFS/sugar tran 99.8 2.9E-16 6.4E-21 154.9 25.1 253 135-407 23-295 (428)
109 PF00083 Sugar_tr: Sugar (and 99.7 1.4E-21 3E-26 194.5 -13.9 283 121-407 7-321 (451)
110 PRK10429 melibiose:sodium symp 99.7 1.7E-15 3.8E-20 151.1 27.1 265 121-404 13-298 (473)
111 PRK09848 glucuronide transport 99.7 1.9E-15 4E-20 150.1 25.3 264 121-407 15-299 (448)
112 KOG3626 Organic anion transpor 99.7 3.9E-16 8.5E-21 155.4 17.6 290 113-402 96-459 (735)
113 COG2270 Permeases of the major 99.7 3.4E-14 7.4E-19 131.8 25.9 287 148-448 57-419 (438)
114 PRK11462 putative transporter; 99.7 5.3E-14 1.2E-18 139.5 27.8 261 122-406 17-297 (460)
115 COG2211 MelB Na+/melibiose sym 99.7 9E-14 2E-18 133.1 26.7 270 119-407 17-307 (467)
116 PF03137 OATP: Organic Anion T 99.6 1.5E-17 3.2E-22 165.7 -0.3 287 116-402 5-372 (539)
117 COG3104 PTR2 Dipeptide/tripept 99.6 8.6E-13 1.9E-17 125.4 30.1 177 116-292 23-208 (498)
118 TIGR00889 2A0110 nucleoside tr 99.6 6.3E-15 1.4E-19 144.5 15.7 159 132-290 226-402 (418)
119 PF05631 DUF791: Protein of un 99.6 4.2E-13 9.1E-18 123.1 25.1 249 128-398 48-304 (354)
120 KOG2325 Predicted transporter/ 99.6 6.5E-13 1.4E-17 127.6 26.5 250 112-376 32-302 (488)
121 PRK10642 proline/glycine betai 99.6 1.3E-13 2.8E-18 138.4 21.3 170 126-295 262-435 (490)
122 PRK15011 sugar efflux transpor 99.6 1.6E-13 3.4E-18 133.9 19.9 157 132-290 234-391 (393)
123 PRK05122 major facilitator sup 99.6 2.2E-13 4.7E-18 133.4 20.5 160 132-294 234-393 (399)
124 TIGR00890 2A0111 Oxalate/Forma 99.6 5.4E-14 1.2E-18 136.2 15.4 150 133-282 224-374 (377)
125 PF03209 PUCC: PUCC protein; 99.6 2.9E-12 6.3E-17 119.5 25.1 241 140-398 6-270 (403)
126 PRK11551 putative 3-hydroxyphe 99.5 1.8E-13 3.8E-18 134.3 17.6 160 130-290 236-396 (406)
127 TIGR01299 synapt_SV2 synaptic 99.5 3.2E-13 7E-18 139.0 19.8 139 153-293 599-737 (742)
128 TIGR00880 2_A_01_02 Multidrug 99.5 3.9E-14 8.5E-19 116.5 10.7 134 155-289 4-137 (141)
129 PRK03545 putative arabinose tr 99.5 4.2E-13 9E-18 130.9 19.3 152 137-290 229-380 (390)
130 TIGR00899 2A0120 sugar efflux 99.5 4.9E-13 1.1E-17 129.6 19.6 153 135-289 220-373 (375)
131 PRK09528 lacY galactoside perm 99.5 7.4E-14 1.6E-18 137.6 13.6 148 143-291 256-404 (420)
132 COG2814 AraJ Arabinose efflux 99.5 4.6E-13 1E-17 125.7 18.0 178 112-291 210-387 (394)
133 PRK09874 drug efflux system pr 99.5 1.4E-13 3.1E-18 135.0 15.4 159 131-290 236-398 (408)
134 TIGR00902 2A0127 phenyl propri 99.5 5.1E-13 1.1E-17 129.8 18.6 162 121-285 212-374 (382)
135 COG2271 UhpC Sugar phosphate p 99.5 1E-13 2.2E-18 128.5 12.1 180 112-291 250-435 (448)
136 cd06174 MFS The Major Facilita 99.5 7.9E-13 1.7E-17 126.6 19.0 165 123-288 184-350 (352)
137 PRK09556 uhpT sugar phosphate 99.5 4.6E-13 1E-17 133.7 17.9 174 116-289 260-448 (467)
138 PRK12382 putative transporter; 99.5 1.1E-12 2.4E-17 128.0 19.7 155 132-289 234-388 (392)
139 TIGR00893 2A0114 d-galactonate 99.5 1E-12 2.2E-17 128.1 18.7 168 118-287 219-396 (399)
140 PRK03699 putative transporter; 99.5 9.9E-13 2.1E-17 128.4 18.4 174 119-294 210-384 (394)
141 PRK03633 putative MFS family t 99.5 1.5E-12 3.3E-17 126.5 19.6 153 133-289 219-371 (381)
142 PRK10489 enterobactin exporter 99.5 5.4E-13 1.2E-17 131.3 16.2 158 133-291 242-401 (417)
143 PRK09705 cynX putative cyanate 99.5 2.9E-12 6.3E-17 124.9 21.1 164 125-290 216-381 (393)
144 PRK11663 regulatory protein Uh 99.5 1.2E-12 2.5E-17 129.5 18.1 173 119-291 248-425 (434)
145 PRK11010 ampG muropeptide tran 99.5 6E-12 1.3E-16 126.0 23.1 157 136-292 245-405 (491)
146 PRK03893 putative sialic acid 99.5 1.3E-12 2.9E-17 131.6 18.0 148 133-280 294-443 (496)
147 TIGR00883 2A0106 metabolite-pr 99.5 3.7E-13 8.1E-18 131.2 13.5 163 118-280 223-391 (394)
148 TIGR00892 2A0113 monocarboxyla 99.5 4.3E-13 9.4E-18 133.2 13.2 164 120-284 247-415 (455)
149 TIGR00879 SP MFS transporter, 99.5 1.9E-12 4.2E-17 129.6 18.0 177 113-289 283-469 (481)
150 PRK11273 glpT sn-glycerol-3-ph 99.5 9.7E-13 2.1E-17 130.8 15.6 175 118-292 257-437 (452)
151 TIGR00897 2A0118 polyol permea 99.5 4.7E-12 1E-16 123.9 19.2 167 121-289 229-400 (402)
152 PRK09952 shikimate transporter 99.4 3.9E-12 8.6E-17 125.8 18.2 163 129-291 265-434 (438)
153 TIGR00891 2A0112 putative sial 99.4 1E-12 2.2E-17 128.8 13.8 142 133-274 257-400 (405)
154 KOG2816 Predicted transporter 99.4 3.4E-11 7.3E-16 117.4 21.7 309 112-432 20-392 (463)
155 PF11700 ATG22: Vacuole efflux 99.4 1.5E-11 3.3E-16 121.1 19.0 179 114-292 281-470 (477)
156 PF03092 BT1: BT1 family; Int 99.4 2.8E-11 6.1E-16 118.7 20.0 263 134-406 10-289 (433)
157 PRK11128 putative 3-phenylprop 99.4 1.8E-11 3.8E-16 119.1 18.5 151 130-283 221-372 (382)
158 TIGR00887 2A0109 phosphate:H+ 99.4 5.1E-12 1.1E-16 127.4 15.1 171 123-293 297-492 (502)
159 COG2223 NarK Nitrate/nitrite t 99.4 7.5E-12 1.6E-16 116.4 14.3 179 114-293 218-404 (417)
160 TIGR00900 2A0121 H+ Antiporter 99.4 3.9E-12 8.6E-17 122.6 12.9 133 135-267 232-365 (365)
161 PF05977 MFS_3: Transmembrane 99.4 1.7E-11 3.7E-16 122.1 16.8 157 131-288 235-392 (524)
162 PRK10504 putative transporter; 99.4 2.3E-11 5.1E-16 121.7 17.5 149 120-268 267-418 (471)
163 PRK12307 putative sialic acid 99.4 4.4E-11 9.4E-16 118.2 19.2 144 133-277 250-395 (426)
164 PRK15075 citrate-proton sympor 99.4 2.1E-11 4.5E-16 120.6 16.3 149 121-269 245-398 (434)
165 TIGR00881 2A0104 phosphoglycer 99.3 1.7E-11 3.7E-16 118.8 14.9 155 118-272 220-379 (379)
166 PRK11902 ampG muropeptide tran 99.3 2.6E-11 5.7E-16 118.7 15.7 151 137-291 233-391 (402)
167 PRK10406 alpha-ketoglutarate t 99.3 6.5E-11 1.4E-15 117.0 18.3 163 127-290 256-424 (432)
168 PRK10091 MFS transport protein 99.3 5.9E-11 1.3E-15 115.4 17.8 151 137-289 223-375 (382)
169 PRK10077 xylE D-xylose transpo 99.3 9.4E-11 2E-15 117.7 19.7 162 128-289 285-456 (479)
170 TIGR01272 gluP glucose/galacto 99.3 9.6E-11 2.1E-15 109.9 18.3 161 114-278 140-303 (310)
171 PRK10213 nepI ribonucleoside t 99.3 1.3E-10 2.8E-15 113.3 19.7 145 137-283 240-384 (394)
172 PRK10054 putative transporter; 99.3 3.7E-11 8E-16 117.2 15.8 145 142-287 237-381 (395)
173 TIGR00895 2A0115 benzoate tran 99.3 3E-11 6.4E-16 118.0 14.7 142 120-262 256-397 (398)
174 PLN00028 nitrate transmembrane 99.3 2.3E-11 5E-16 121.5 14.1 157 133-292 271-435 (476)
175 TIGR00712 glpT glycerol-3-phos 99.3 3.4E-11 7.4E-16 119.2 15.1 162 128-289 265-432 (438)
176 TIGR02718 sider_RhtX_FptX side 99.3 7.7E-11 1.7E-15 114.9 16.9 151 135-285 229-386 (390)
177 TIGR00792 gph sugar (Glycoside 99.3 1.9E-11 4.2E-16 121.1 12.6 148 121-269 229-384 (437)
178 TIGR00882 2A0105 oligosacchari 99.3 5.6E-11 1.2E-15 116.2 15.7 141 145-286 250-391 (396)
179 PRK15402 multidrug efflux syst 99.3 8.8E-11 1.9E-15 115.2 16.9 151 133-284 234-389 (406)
180 TIGR00898 2A0119 cation transp 99.3 1.7E-11 3.7E-16 123.8 11.9 150 139-293 348-498 (505)
181 PF03825 Nuc_H_symport: Nucleo 99.3 1.5E-10 3.2E-15 112.0 17.2 169 121-289 214-394 (400)
182 KOG2504 Monocarboxylate transp 99.3 8E-11 1.7E-15 116.8 15.4 176 114-290 298-476 (509)
183 COG2270 Permeases of the major 99.3 4E-11 8.6E-16 111.7 12.3 162 130-292 269-431 (438)
184 KOG0569 Permease of the major 99.3 1E-10 2.2E-15 113.5 14.9 188 106-294 262-459 (485)
185 TIGR00894 2A0114euk Na(+)-depe 99.3 1.3E-10 2.9E-15 116.1 16.2 177 114-291 261-451 (465)
186 PF01770 Folate_carrier: Reduc 99.2 1.3E-08 2.7E-13 96.5 27.4 266 135-402 25-315 (412)
187 TIGR02332 HpaX 4-hydroxyphenyl 99.2 2.2E-10 4.9E-15 112.4 15.7 162 117-279 245-410 (412)
188 PF06813 Nodulin-like: Nodulin 99.2 5.4E-09 1.2E-13 93.2 22.3 163 127-292 15-184 (250)
189 PF01306 LacY_symp: LacY proto 99.2 3.1E-10 6.7E-15 108.0 14.7 157 136-293 246-403 (412)
190 PRK15034 nitrate/nitrite trans 99.2 8E-10 1.7E-14 107.7 17.9 175 117-292 255-456 (462)
191 TIGR00926 2A1704 Peptide:H+ sy 99.2 3E-08 6.6E-13 101.3 29.7 155 136-290 10-182 (654)
192 TIGR00896 CynX cyanate transpo 99.2 8.5E-10 1.8E-14 106.2 17.6 141 125-267 208-350 (355)
193 PRK11646 multidrug resistance 99.2 4.6E-10 1E-14 109.7 15.5 152 134-286 228-384 (400)
194 PRK10133 L-fucose transporter; 99.2 1.2E-09 2.5E-14 108.0 17.2 139 141-283 287-426 (438)
195 KOG4686 Predicted sugar transp 99.2 1.4E-09 3E-14 95.5 15.1 151 138-290 289-443 (459)
196 KOG0253 Synaptic vesicle trans 99.2 2.2E-10 4.7E-15 104.2 10.5 134 158-294 390-523 (528)
197 TIGR00710 efflux_Bcr_CflA drug 99.1 1E-09 2.2E-14 106.7 15.5 139 132-272 224-368 (385)
198 PF13347 MFS_2: MFS/sugar tran 99.1 2E-09 4.3E-14 106.3 16.8 151 117-268 228-387 (428)
199 PF06963 FPN1: Ferroportin1 (F 99.1 2.8E-07 6.1E-12 89.0 30.9 299 116-420 4-337 (432)
200 KOG0637 Sucrose transporter an 99.1 1.6E-09 3.4E-14 101.8 14.7 282 116-404 34-364 (498)
201 TIGR00903 2A0129 major facilit 99.1 2.9E-09 6.4E-14 102.5 17.3 167 117-290 195-365 (368)
202 PRK10473 multidrug efflux syst 99.1 3.3E-09 7.2E-14 103.5 17.3 138 136-279 225-363 (392)
203 PRK08633 2-acyl-glycerophospho 99.1 2.7E-09 5.7E-14 118.9 18.2 146 133-279 251-399 (1146)
204 TIGR00769 AAA ADP/ATP carrier 99.1 1.8E-07 4E-12 91.4 28.5 280 113-407 6-338 (472)
205 PF07690 MFS_1: Major Facilita 99.1 7E-10 1.5E-14 106.4 11.6 136 121-256 213-352 (352)
206 PRK11195 lysophospholipid tran 99.1 6.8E-09 1.5E-13 101.2 18.5 147 139-288 231-378 (393)
207 PRK06814 acylglycerophosphoeth 99.1 2E-09 4.4E-14 119.5 16.1 161 120-280 231-412 (1140)
208 PRK11102 bicyclomycin/multidru 99.1 5.1E-09 1.1E-13 101.6 16.5 128 133-261 213-345 (377)
209 PRK14995 methyl viologen resis 99.1 2.3E-09 5.1E-14 107.8 14.5 143 122-264 267-412 (495)
210 COG2807 CynX Cyanate permease 99.1 1.9E-08 4E-13 92.1 18.2 169 119-289 213-384 (395)
211 PRK09848 glucuronide transport 99.0 1.7E-09 3.7E-14 107.5 12.4 149 120-268 234-391 (448)
212 PRK10429 melibiose:sodium symp 99.0 2.9E-09 6.4E-14 106.4 13.5 151 118-268 235-396 (473)
213 TIGR00711 efflux_EmrB drug res 99.0 3.1E-09 6.7E-14 106.9 13.8 141 125-265 266-410 (485)
214 PRK11043 putative transporter; 99.0 2.2E-08 4.7E-13 98.1 18.7 137 133-270 222-362 (401)
215 TIGR00901 2A0125 AmpG-related 99.0 7.2E-09 1.6E-13 99.8 14.7 124 126-249 221-355 (356)
216 PRK09669 putative symporter Ya 98.9 1.5E-08 3.2E-13 100.7 14.4 133 136-268 251-391 (444)
217 PRK11652 emrD multidrug resist 98.9 7.1E-08 1.5E-12 94.2 16.3 126 140-266 234-361 (394)
218 COG0477 ProP Permeases of the 98.9 1.8E-06 4E-11 80.5 25.4 160 122-281 10-176 (338)
219 TIGR00885 fucP L-fucose:H+ sym 98.9 7.7E-08 1.7E-12 94.2 16.4 152 123-278 241-400 (410)
220 KOG3762 Predicted transporter 98.9 1.6E-08 3.5E-13 96.8 11.0 162 127-289 384-546 (618)
221 KOG2532 Permease of the major 98.8 3.2E-08 6.9E-13 97.2 11.9 176 114-290 258-447 (466)
222 TIGR00924 yjdL_sub1_fam amino 98.8 2.3E-07 5E-12 92.7 18.1 139 151-289 314-467 (475)
223 COG0738 FucP Fucose permease [ 98.8 1.8E-07 3.8E-12 87.1 15.3 166 114-283 236-402 (422)
224 TIGR00886 2A0108 nitrite extru 98.8 4E-08 8.8E-13 94.9 11.1 120 131-251 242-365 (366)
225 TIGR00788 fbt folate/biopterin 98.8 3.2E-08 6.8E-13 98.6 10.4 150 142-291 281-447 (468)
226 PF00083 Sugar_tr: Sugar (and 98.8 7.2E-11 1.6E-15 117.5 -8.7 165 128-294 267-441 (451)
227 PRK11462 putative transporter; 98.7 1.8E-07 3.9E-12 93.0 14.7 122 147-268 261-390 (460)
228 COG2211 MelB Na+/melibiose sym 98.7 1.6E-07 3.4E-12 90.7 12.7 153 116-268 238-399 (467)
229 KOG0252 Inorganic phosphate tr 98.7 1.8E-08 3.9E-13 94.8 5.7 183 114-296 304-504 (538)
230 PF03209 PUCC: PUCC protein; 98.7 6.5E-07 1.4E-11 84.1 15.6 172 113-287 211-395 (403)
231 KOG3764 Vesicular amine transp 98.7 7.9E-08 1.7E-12 88.9 8.0 167 124-291 280-455 (464)
232 PRK15403 multidrug efflux syst 98.6 7.6E-07 1.6E-11 87.5 15.0 158 123-282 227-389 (413)
233 PF03219 TLC: TLC ATP/ADP tran 98.6 0.00015 3.2E-09 71.7 29.0 285 111-407 21-354 (491)
234 PRK09584 tppB putative tripept 98.6 2.6E-06 5.6E-11 85.7 17.0 136 151-286 318-475 (500)
235 TIGR01301 GPH_sucrose GPH fami 98.5 2.2E-06 4.9E-11 84.4 15.5 179 114-292 258-473 (477)
236 KOG3098 Uncharacterized conser 98.5 3.3E-05 7.1E-10 74.9 21.7 235 151-404 51-311 (461)
237 KOG3574 Acetyl-CoA transporter 98.5 2.6E-05 5.6E-10 72.0 18.8 262 113-395 30-323 (510)
238 PRK15462 dipeptide/tripeptide 98.5 3.5E-06 7.7E-11 83.3 14.4 121 335-457 8-187 (493)
239 PF05978 UNC-93: Ion channel r 98.5 1.2E-05 2.7E-10 66.2 15.1 109 153-263 41-149 (156)
240 KOG4332 Predicted sugar transp 98.4 1.2E-06 2.5E-11 76.8 9.0 252 128-402 51-312 (454)
241 KOG0254 Predicted transporter 98.4 8.7E-06 1.9E-10 82.4 16.9 180 113-293 294-487 (513)
242 PRK10207 dipeptide/tripeptide 98.4 7.6E-06 1.6E-10 81.9 16.1 138 151-288 311-474 (489)
243 PF12832 MFS_1_like: MFS_1 lik 98.4 2.4E-06 5.2E-11 61.3 8.6 71 119-189 5-75 (77)
244 KOG3762 Predicted transporter 98.4 7.1E-06 1.5E-10 79.1 13.0 76 331-407 366-441 (618)
245 KOG2533 Permease of the major 98.3 2.4E-06 5.1E-11 84.4 9.7 164 115-278 274-444 (495)
246 PF02487 CLN3: CLN3 protein; 98.3 0.00027 5.8E-09 67.5 22.8 133 151-290 61-195 (402)
247 PF06779 DUF1228: Protein of u 98.3 4.5E-06 9.7E-11 60.3 8.1 76 126-201 4-79 (85)
248 PTZ00207 hypothetical protein; 98.3 6.1E-06 1.3E-10 83.2 11.9 173 115-290 354-552 (591)
249 KOG2615 Permease of the major 98.3 1.2E-05 2.7E-10 74.3 11.7 132 133-265 280-414 (451)
250 COG3202 ATP/ADP translocase [E 98.3 0.0054 1.2E-07 59.3 30.2 280 111-403 24-353 (509)
251 PF06609 TRI12: Fungal trichot 98.2 2.1E-05 4.6E-10 78.9 13.9 181 114-294 310-558 (599)
252 PF12832 MFS_1_like: MFS_1 lik 98.1 2.5E-05 5.5E-10 56.0 7.7 65 340-405 4-68 (77)
253 KOG0255 Synaptic vesicle trans 98.0 4.6E-05 9.9E-10 77.4 12.4 156 137-296 341-499 (521)
254 KOG2816 Predicted transporter 97.9 0.00032 6.9E-09 69.0 15.5 124 139-264 267-391 (463)
255 PF00854 PTR2: POT family; In 97.8 0.00011 2.5E-09 71.0 10.6 111 180-290 2-123 (372)
256 PF02487 CLN3: CLN3 protein; 97.7 0.0012 2.7E-08 63.0 14.6 116 144-263 276-395 (402)
257 PRK03612 spermidine synthase; 97.7 0.0045 9.8E-08 62.3 19.3 138 140-278 41-185 (521)
258 PF13000 Acatn: Acetyl-coenzym 97.7 0.0055 1.2E-07 59.4 18.6 276 118-400 4-337 (544)
259 KOG1330 Sugar transporter/spin 97.6 8.2E-05 1.8E-09 70.9 5.5 126 337-463 34-214 (493)
260 KOG3810 Micronutrient transpor 97.6 0.001 2.2E-08 61.0 11.7 258 143-402 35-301 (433)
261 TIGR00806 rfc RFC reduced fola 97.6 0.0018 3.9E-08 63.1 13.8 77 354-430 43-174 (511)
262 PF05631 DUF791: Protein of un 97.5 0.0044 9.5E-08 57.8 14.7 42 366-407 63-104 (354)
263 KOG3097 Predicted membrane pro 97.4 0.059 1.3E-06 49.4 20.6 73 158-232 67-139 (390)
264 COG3104 PTR2 Dipeptide/tripept 97.3 0.0071 1.5E-07 58.7 14.6 140 150-289 325-486 (498)
265 KOG1237 H+/oligopeptide sympor 97.3 0.012 2.6E-07 59.7 17.0 176 113-288 36-243 (571)
266 KOG2563 Permease of the major 97.3 0.00097 2.1E-08 63.6 7.7 176 117-292 269-452 (480)
267 KOG2325 Predicted transporter/ 97.1 0.0013 2.8E-08 64.2 7.4 175 112-286 260-471 (488)
268 PF03092 BT1: BT1 family; Int 97.0 0.0028 6E-08 62.5 8.7 149 146-294 252-417 (433)
269 PF06963 FPN1: Ferroportin1 (F 97.0 0.014 3.1E-07 56.8 13.0 128 133-260 277-413 (432)
270 TIGR00805 oat sodium-independe 96.8 0.0075 1.6E-07 62.5 10.1 151 115-265 331-581 (633)
271 PF07672 MFS_Mycoplasma: Mycop 96.6 0.02 4.3E-07 50.9 9.9 101 235-349 2-107 (267)
272 KOG1479 Nucleoside transporter 96.4 0.2 4.4E-06 47.9 16.0 118 117-236 21-149 (406)
273 PF03137 OATP: Organic Anion T 96.4 0.00076 1.7E-08 68.1 0.0 153 113-265 304-514 (539)
274 TIGR00880 2_A_01_02 Multidrug 96.4 0.0047 1E-07 49.8 4.7 59 395-454 76-134 (141)
275 KOG3098 Uncharacterized conser 96.3 0.093 2E-06 51.4 13.3 143 118-261 244-410 (461)
276 TIGR00939 2a57 Equilibrative N 96.1 0.18 4E-06 49.6 14.4 111 150-261 308-430 (437)
277 KOG4830 Predicted sugar transp 95.8 0.0022 4.8E-08 56.3 -0.4 214 118-391 21-256 (412)
278 TIGR00939 2a57 Equilibrative N 95.8 0.22 4.8E-06 49.1 13.4 52 202-258 105-156 (437)
279 KOG3626 Organic anion transpor 95.6 0.18 3.9E-06 52.0 12.5 152 114-265 392-649 (735)
280 PF01770 Folate_carrier: Reduc 95.5 0.098 2.1E-06 50.4 9.4 102 147-249 283-386 (412)
281 KOG3880 Predicted small molecu 94.9 0.18 3.9E-06 46.0 8.8 138 151-294 64-203 (409)
282 PF06779 DUF1228: Protein of u 94.9 0.19 4.1E-06 36.5 7.4 54 349-403 5-58 (85)
283 PF01733 Nucleoside_tran: Nucl 94.2 0.016 3.4E-07 54.5 0.5 107 153-260 186-305 (309)
284 TIGR00926 2A1704 Peptide:H+ sy 93.6 0.65 1.4E-05 48.3 11.0 44 408-451 126-175 (654)
285 KOG4332 Predicted sugar transp 93.2 1.6 3.4E-05 39.3 11.0 134 151-284 284-425 (454)
286 KOG0637 Sucrose transporter an 92.9 0.86 1.9E-05 44.2 9.6 127 152-279 335-485 (498)
287 PF06813 Nodulin-like: Nodulin 91.9 1.9 4.1E-05 38.9 10.2 72 351-431 17-88 (250)
288 TIGR00769 AAA ADP/ATP carrier 91.9 15 0.00032 36.7 18.0 77 206-282 269-346 (472)
289 PF13000 Acatn: Acetyl-coenzym 90.2 10 0.00022 37.7 13.8 67 203-269 405-471 (544)
290 KOG3880 Predicted small molecu 89.8 0.71 1.5E-05 42.3 5.4 64 199-262 338-401 (409)
291 PRK03612 spermidine synthase; 89.3 7.1 0.00015 39.6 12.8 28 408-435 147-175 (521)
292 PF07672 MFS_Mycoplasma: Mycop 88.2 8.5 0.00018 34.6 10.9 93 152-244 144-247 (267)
293 PF07857 DUF1632: CEO family ( 88.0 20 0.00043 32.3 13.2 21 346-366 188-208 (254)
294 KOG1479 Nucleoside transporter 87.9 1.1 2.3E-05 43.1 5.5 111 148-259 281-399 (406)
295 PF06912 DUF1275: Protein of u 84.8 26 0.00056 30.6 15.6 44 235-279 158-201 (209)
296 TIGR00844 c_cpa1 na(+)/h(+) an 84.7 59 0.0013 34.6 24.3 36 244-279 106-141 (810)
297 PF03219 TLC: TLC ATP/ADP tran 83.4 53 0.0011 33.0 19.1 78 206-283 285-363 (491)
298 KOG3810 Micronutrient transpor 83.0 19 0.00042 34.0 10.8 131 152-286 274-417 (433)
299 KOG1307 K+-dependent Ca2+/Na+ 81.6 17 0.00037 35.3 10.1 48 131-180 441-488 (588)
300 COG4262 Predicted spermidine s 81.4 50 0.0011 31.3 19.4 140 144-285 38-186 (508)
301 PF01925 TauE: Sulfite exporte 78.7 42 0.00092 29.8 11.9 32 249-280 70-101 (240)
302 PF02990 EMP70: Endomembrane p 78.6 73 0.0016 32.4 14.5 30 376-405 301-330 (521)
303 COG5336 Uncharacterized protei 75.5 10 0.00023 28.5 5.5 33 158-190 51-84 (116)
304 KOG2601 Iron transporter [Inor 72.8 60 0.0013 31.2 10.9 165 117-281 30-217 (503)
305 PRK00293 dipZ thiol:disulfide 71.8 1.3E+02 0.0028 31.1 17.9 30 370-399 323-352 (571)
306 PF12805 FUSC-like: FUSC-like 71.0 22 0.00047 32.9 8.0 35 184-218 4-38 (284)
307 KOG3574 Acetyl-CoA transporter 68.7 28 0.0006 33.5 7.9 134 135-271 286-437 (510)
308 KOG2881 Predicted membrane pro 68.5 90 0.002 28.0 11.8 15 392-406 260-274 (294)
309 PRK10263 DNA translocase FtsK; 68.1 23 0.00051 39.5 8.3 26 249-274 141-166 (1355)
310 PF05978 UNC-93: Ion channel r 65.8 55 0.0012 27.1 8.5 33 375-407 40-72 (156)
311 PF02554 CstA: Carbon starvati 63.6 1.4E+02 0.0031 28.6 14.0 39 230-273 48-87 (376)
312 PF02535 Zip: ZIP Zinc transpo 58.8 1.6E+02 0.0034 27.5 15.2 28 206-233 263-291 (317)
313 TIGR01667 YCCS_YHJK integral m 58.5 51 0.0011 34.8 8.7 43 177-219 55-97 (701)
314 KOG2601 Iron transporter [Inor 58.2 96 0.0021 29.9 9.3 73 335-407 26-98 (503)
315 PF05255 UPF0220: Uncharacteri 58.1 1.1E+02 0.0024 25.6 9.1 59 232-290 15-79 (166)
316 TIGR01666 YCCS hypothetical me 57.5 55 0.0012 34.6 8.7 43 176-218 54-96 (704)
317 TIGR00927 2A1904 K+-dependent 56.8 78 0.0017 34.3 9.4 54 131-186 950-1003(1096)
318 KOG2765 Predicted membrane pro 55.4 80 0.0017 30.1 8.3 16 173-188 208-223 (416)
319 PF09512 ThiW: Thiamine-precur 54.3 64 0.0014 26.2 6.6 70 356-433 50-119 (150)
320 PF02694 UPF0060: Uncharacteri 51.5 36 0.00078 25.8 4.5 48 149-196 54-101 (107)
321 KOG1237 H+/oligopeptide sympor 51.1 2.4E+02 0.0052 29.1 11.9 63 203-265 458-520 (571)
322 PF01733 Nucleoside_tran: Nucl 49.8 6.6 0.00014 36.8 0.6 20 376-395 186-205 (309)
323 PF03741 TerC: Integral membra 49.5 1.7E+02 0.0036 25.0 15.9 57 219-277 12-68 (183)
324 PF11947 DUF3464: Protein of u 48.2 26 0.00057 28.7 3.6 48 204-254 98-145 (153)
325 PRK02237 hypothetical protein; 47.8 57 0.0012 24.8 5.0 48 149-196 56-103 (109)
326 COG1230 CzcD Co/Zn/Cd efflux s 46.8 2.4E+02 0.0053 26.1 14.1 151 118-278 29-194 (296)
327 PF02990 EMP70: Endomembrane p 46.2 1E+02 0.0022 31.4 8.4 72 330-403 252-324 (521)
328 KOG1277 Endosomal membrane pro 44.7 47 0.001 32.4 5.2 26 380-405 335-360 (593)
329 PF01864 DUF46: Putative integ 43.5 1.2E+02 0.0026 25.6 7.0 53 377-433 90-142 (175)
330 COG5336 Uncharacterized protei 42.5 1.2E+02 0.0027 23.0 6.0 18 382-399 52-69 (116)
331 COG0477 ProP Permeases of the 42.4 1.4E+02 0.003 26.7 8.4 53 350-403 16-70 (338)
332 PTZ00370 STEVOR; Provisional 40.5 45 0.00098 30.3 4.2 27 266-292 255-281 (296)
333 PF08566 Pam17: Mitochondrial 40.0 1.2E+02 0.0026 25.4 6.3 31 141-171 69-101 (173)
334 PRK15015 carbon starvation pro 39.9 4.6E+02 0.01 27.4 17.8 104 159-271 11-116 (701)
335 PTZ00265 multidrug resistance 39.3 6.6E+02 0.014 29.6 14.2 138 319-456 35-217 (1466)
336 TIGR02230 ATPase_gene1 F0F1-AT 38.0 1.6E+02 0.0035 22.2 6.2 28 164-191 57-85 (100)
337 TIGR02230 ATPase_gene1 F0F1-AT 37.6 1.8E+02 0.0038 22.0 6.3 29 250-278 54-86 (100)
338 PF06123 CreD: Inner membrane 37.3 4.2E+02 0.0091 26.2 11.2 74 166-243 308-385 (430)
339 PF11299 DUF3100: Protein of u 37.2 48 0.001 29.2 3.8 90 168-258 126-225 (241)
340 PF06638 Strabismus: Strabismu 36.6 4.2E+02 0.0091 26.5 10.3 13 200-212 178-190 (505)
341 PF06800 Sugar_transport: Suga 35.3 3.5E+02 0.0076 24.7 17.6 20 378-397 168-187 (269)
342 PF12273 RCR: Chitin synthesis 35.3 18 0.00039 28.8 0.9 14 269-282 1-14 (130)
343 PF11990 DUF3487: Protein of u 34.7 82 0.0018 24.8 4.4 29 367-395 19-47 (121)
344 PF11833 DUF3353: Protein of u 34.2 3.1E+02 0.0067 23.7 8.9 32 234-265 136-167 (194)
345 PF03596 Cad: Cadmium resistan 34.2 2.6E+02 0.0057 24.0 7.7 29 256-284 43-71 (191)
346 COG1268 BioY Uncharacterized c 33.9 1.8E+02 0.0038 24.9 6.6 23 156-178 89-111 (184)
347 KOG4830 Predicted sugar transp 33.3 48 0.001 30.0 3.2 132 100-235 191-325 (412)
348 COG2261 Predicted membrane pro 32.9 1.9E+02 0.0041 20.9 9.2 47 383-433 4-50 (82)
349 PF13440 Polysacc_synt_3: Poly 32.8 3.4E+02 0.0074 23.8 23.1 33 355-388 201-233 (251)
350 COG3619 Predicted membrane pro 32.6 3.6E+02 0.0077 23.9 19.1 31 148-178 54-84 (226)
351 PF01940 DUF92: Integral membr 31.6 3.7E+02 0.008 23.8 12.2 11 326-336 75-85 (226)
352 COG2076 EmrE Membrane transpor 31.2 2.4E+02 0.0052 21.5 10.2 51 167-217 18-68 (106)
353 PRK11715 inner membrane protei 29.7 5.7E+02 0.012 25.4 10.8 75 165-243 313-391 (436)
354 TIGR03750 conj_TIGR03750 conju 29.7 92 0.002 24.0 3.8 10 368-377 17-26 (111)
355 COG2274 SunT ABC-type bacterio 29.3 7.3E+02 0.016 26.5 17.6 27 263-289 288-314 (709)
356 PF09527 ATPase_gene1: Putativ 29.3 1.6E+02 0.0036 19.0 6.1 36 157-192 8-44 (55)
357 COG2233 UraA Xanthine/uracil p 28.8 3.4E+02 0.0074 26.9 8.4 66 117-185 19-85 (451)
358 KOG2887 Membrane protein invol 28.4 3.6E+02 0.0078 22.7 12.0 63 171-240 101-164 (175)
359 PF05961 Chordopox_A13L: Chord 28.2 1.2E+02 0.0025 20.8 3.6 25 441-465 6-30 (68)
360 PF02632 BioY: BioY family; I 27.8 2.3E+02 0.005 23.2 6.2 25 156-180 60-84 (148)
361 PF07760 DUF1616: Protein of u 27.6 4.9E+02 0.011 24.0 9.5 56 206-262 22-77 (287)
362 COG5522 Predicted integral mem 27.2 4.2E+02 0.009 23.0 12.9 24 246-269 46-69 (236)
363 PF04226 Transgly_assoc: Trans 26.7 1.7E+02 0.0038 18.5 5.1 31 254-284 6-40 (48)
364 KOG1278 Endosomal membrane pro 26.5 3.4E+02 0.0074 27.6 7.9 32 369-400 356-387 (628)
365 PF11151 DUF2929: Protein of u 26.2 2E+02 0.0044 19.1 5.6 42 250-291 13-54 (57)
366 TIGR03173 pbuX xanthine permea 25.9 6.3E+02 0.014 24.7 14.9 101 137-238 15-116 (406)
367 TIGR00927 2A1904 K+-dependent 25.8 6.7E+02 0.014 27.7 10.3 21 133-153 479-499 (1096)
368 PF06570 DUF1129: Protein of u 25.4 4.5E+02 0.0098 22.8 14.1 28 337-364 77-104 (206)
369 COG1079 Uncharacterized ABC-ty 25.1 5.7E+02 0.012 23.9 13.1 97 162-262 20-117 (304)
370 PHA03049 IMV membrane protein; 25.0 1.6E+02 0.0034 20.1 3.7 25 441-465 6-30 (68)
371 TIGR03802 Asp_Ala_antiprt aspa 24.5 6.9E+02 0.015 25.8 10.3 83 150-234 451-533 (562)
372 COG3202 ATP/ADP translocase [E 24.0 7.6E+02 0.016 24.9 18.0 81 206-286 287-369 (509)
373 PF04341 DUF485: Protein of un 23.2 3.1E+02 0.0067 20.2 5.8 42 336-377 16-57 (91)
374 KOG1277 Endosomal membrane pro 22.8 2.5E+02 0.0054 27.7 6.1 24 151-174 325-348 (593)
375 PF07857 DUF1632: CEO family ( 22.4 4.9E+02 0.011 23.6 7.7 13 145-157 214-226 (254)
376 KOG2262 Sexual differentiation 22.0 2.8E+02 0.006 28.9 6.5 15 206-220 186-200 (761)
377 PRK03818 putative transporter; 21.7 8E+02 0.017 25.3 10.1 81 150-231 436-516 (552)
378 PF05232 BTP: Bacterial Transm 21.6 2.8E+02 0.0061 19.1 5.9 46 134-179 19-64 (67)
379 TIGR00267 conserved hypothetic 21.4 4.9E+02 0.011 21.8 11.5 26 381-406 122-147 (169)
380 PTZ00101 rhomboid-1 protease; 20.7 6.7E+02 0.015 23.1 12.3 31 158-188 117-148 (278)
381 PF13073 DUF3937: Protein of u 20.6 2.6E+02 0.0057 18.8 4.1 38 333-370 2-39 (73)
382 KOG1397 Ca2+/H+ antiporter VCX 20.2 2.8E+02 0.0061 26.7 5.8 42 113-154 289-330 (441)
383 KOG3097 Predicted membrane pro 20.1 2.8E+02 0.006 26.4 5.7 44 146-189 307-350 (390)
No 1
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8e-35 Score=266.85 Aligned_cols=345 Identities=18% Similarity=0.237 Sum_probs=281.9
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHH
Q 012159 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (470)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (470)
|++++..+++++...++.+-.++.+.|.+.++.++|..|.|++.+.+.+.+.++..+.|.++||.++|+.+.+++++.++
T Consensus 27 r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai 106 (448)
T COG2271 27 RIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAI 106 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHH
Confidence 56788889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhH--HhhhcccCch
Q 012159 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA--PPIIENLGWE 269 (470)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--~~l~~~~g~~ 269 (470)
..+++++ .++.+.+.++.++.|.++|..+|.+...+.+|++++|||+..++++..-++|+.+.|++. +++..+.+||
T Consensus 107 ~nil~Gf-s~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~ 185 (448)
T COG2271 107 VNILFGF-SPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWR 185 (448)
T ss_pred HHHHHhh-hhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchh
Confidence 9999874 557799999999999999999999999999999999999999999999999999999999 8999899999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhcc----CCCCCHHHHhcCHHHHHHHHHH
Q 012159 270 SVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGES----LKDVPWKAIFRSKAVWAMIYAH 345 (470)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~ 345 (470)
..|++.++++++..++.+++.+++|++....+-++- .....+.. ++.++. .+..-++.+++||.+|.+++..
T Consensus 186 ~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~-~~d~~e~~---~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~ 261 (448)
T COG2271 186 AAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEY-RGDPLEIY---EEEKENEGLTAWQIFVKYVLKNKLIWLLALAN 261 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHh-hcCchhhh---hhhccCCCccHHHHHHHHHHcChHHHHHHHHH
Confidence 999999999988777776666655544332211111 00000000 111111 0112246788999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCCcch----------------
Q 012159 346 FCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLI--ATGVETT---------------- 407 (470)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~--~~~~~~~---------------- 407 (470)
++.+..-+++..|.|.|+.|..|++...+++..+.+-++++.|++++|+++||+. +|.....
T Consensus 262 vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~ 341 (448)
T COG2271 262 VFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLA 341 (448)
T ss_pred HHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999986 3333222
Q ss_pred ------------------------------------------HHHHHHhhhh-HHHHHHHHHHHhhccCCceehhhHHHH
Q 012159 408 ------------------------------------------MGITNTVGAV-PGIVGVALTGYLLDSTHSWSMSLFAPS 444 (470)
Q Consensus 408 ------------------------------------------~g~~~~~~~~-~~~ig~~~~g~l~~~~~~~~~~~~~~~ 444 (470)
.|+...++++ |.+.+....|++.|..+ |...+++..
T Consensus 342 ~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~g-W~g~Fi~~~ 420 (448)
T COG2271 342 PNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWG-WDGGFIVLS 420 (448)
T ss_pred CCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCC-CcchHHHHH
Confidence 6777777887 78888888888888744 555666655
Q ss_pred HHHHHHHHHHHhhccCCC
Q 012159 445 IFFYLTGTIVWLAFASSK 462 (470)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~ 462 (470)
+..+++.+++.......+
T Consensus 421 ~~a~l~~lll~~~~~~~~ 438 (448)
T COG2271 421 IAALLAILLLLPVWNAEE 438 (448)
T ss_pred HHHHHHHHHHHHHHhhcc
Confidence 555555555544444333
No 2
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.4e-33 Score=261.16 Aligned_cols=325 Identities=19% Similarity=0.257 Sum_probs=277.8
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHH
Q 012159 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (470)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (470)
.+..++.+.++.|............+|.+.+|+|.+..+.|++.++|.++..++.++...+.||+.||++++..++++.+
T Consensus 11 ~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~ 90 (394)
T COG2814 11 MWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIV 90 (394)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHH
Confidence 35677788888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHH
Q 012159 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (470)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~ 271 (470)
+.++. .++++++.+++.|++.|+..|.+++...++..+..|+++|++++++...+..++.++|.+++.++.+.+|||++
T Consensus 91 ~n~l~-alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~ 169 (394)
T COG2814 91 SNLLS-ALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRAT 169 (394)
T ss_pred HHHHH-HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHH
Confidence 99877 57888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHH
Q 012159 272 FYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWG 351 (470)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 351 (470)
|+..++++++..+..+...+ ++......... ..+..+++|+|.++...+..++...+
T Consensus 170 F~~ia~l~ll~~~~~~~~lP-~~~~~~~~~~~----------------------~~~~~~~l~~p~v~~~l~~t~l~~~g 226 (394)
T COG2814 170 FLAIAVLALLALLLLWKLLP-PSEISGSLPGP----------------------LRTLLRLLRRPGVLLGLLATFLFMTG 226 (394)
T ss_pred HHHHHHHHHHHHHHHHHhCC-CccCCCCCCcc----------------------hhHHHHHhcCchHHHHHHHHHHHHcc
Confidence 99999998777665554443 11111111000 01126789999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch------------------------
Q 012159 352 HYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT------------------------ 407 (470)
Q Consensus 352 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~------------------------ 407 (470)
.+...+|+..++++..|++....+++...++++.++|..+.|++.|| +.++....
T Consensus 227 ~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~ 305 (394)
T COG2814 227 HFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALA 305 (394)
T ss_pred hhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHH
Confidence 99999999999999999999999999999999999999999999999 66655443
Q ss_pred -------------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHHHHHHHHHHHHh
Q 012159 408 -------------------------------MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWL 456 (470)
Q Consensus 408 -------------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (470)
.++.....++|..+|..++|.+.|+.+ +....++.+...++.....+.
T Consensus 306 ~~~~wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g-~~~~~~~~a~l~~~a~~~~~~ 384 (394)
T COG2814 306 LLFLWGFAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALG-YAATGWVGAALLLLALLLALL 384 (394)
T ss_pred HHHHHHHHhhhhhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hHHHHHHHHHHHHHHHHHHHH
Confidence 778888899999999999999999954 555555555555555544444
Q ss_pred hccCCC
Q 012159 457 AFASSK 462 (470)
Q Consensus 457 ~~~~~~ 462 (470)
..++.+
T Consensus 385 ~~~~~~ 390 (394)
T COG2814 385 SARKDR 390 (394)
T ss_pred HHhccc
Confidence 444333
No 3
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=3.4e-33 Score=278.24 Aligned_cols=338 Identities=12% Similarity=0.078 Sum_probs=260.4
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHH
Q 012159 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (470)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (470)
.+.++..+++.+++.++++..++...|.+.+++|++..+.|++.+++.+++.+++++.|+++||+|+|+++.++.+++++
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 106 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAI 106 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHH
Confidence 35567778888888899999999999999999999999999999999999999999999999999999999988888777
Q ss_pred HHHHHHHh----hhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhccc-
Q 012159 192 ATALLPLL----AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL- 266 (470)
Q Consensus 192 ~~~~~~~~----~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~- 266 (470)
+.++++.. .++++.+++.|++.|++.+...|...+++++++|+++||+++|++..+.++|.+++++++.++.+..
T Consensus 107 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~ 186 (467)
T PRK09556 107 CMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFF 186 (467)
T ss_pred HHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhc
Confidence 76665432 4677899999999999999999999999999999999999999999999999999999988776653
Q ss_pred --CchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCC-H-HHHhcCHHHHHHH
Q 012159 267 --GWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVP-W-KAIFRSKAVWAMI 342 (470)
Q Consensus 267 --g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~ 342 (470)
+|+..|.+.+++.++..+..+++.++++++......++. . .+....+.....+++..... + +..+++|.+|...
T Consensus 187 ~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 264 (467)
T PRK09556 187 DGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEI-F-GEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLC 264 (467)
T ss_pred cCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhc-c-cCccchhhhccccccCcHHHHHHHHHHcChHHHHHH
Confidence 599999888887766655555443333322111111100 0 00000000000000000001 1 2378999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch---------------
Q 012159 343 YAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT--------------- 407 (470)
Q Consensus 343 l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~--------------- 407 (470)
+..++......+...|+|.|+++.+|++..++++......++.+++.++.|+++||+++|+....
T Consensus 265 ~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~ 344 (467)
T PRK09556 265 FANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQ 344 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHH
Confidence 99998888888899999999998899999999999999999999999999999999998875432
Q ss_pred ------------------------------------------HHHHHHhhhh-HHHHHHHHHHHhhc------------c
Q 012159 408 ------------------------------------------MGITNTVGAV-PGIVGVALTGYLLD------------S 432 (470)
Q Consensus 408 ------------------------------------------~g~~~~~~~~-~~~ig~~~~g~l~~------------~ 432 (470)
.|+.+..+.+ +.+++|.+.|++.| .
T Consensus 345 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~ 424 (467)
T PRK09556 345 HATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTL 424 (467)
T ss_pred hcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccc
Confidence 6677778786 66899999999999 3
Q ss_pred CCceehhhHHHHHHHHHHHH
Q 012159 433 THSWSMSLFAPSIFFYLTGT 452 (470)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~ 452 (470)
.+ |...+.+..++.++...
T Consensus 425 ~~-~~~~f~~~~~~~~~~~~ 443 (467)
T PRK09556 425 TG-WAGTFAALDIAAIGCIC 443 (467)
T ss_pred cC-hHHHHHHHHHHHHHHHH
Confidence 33 66666655444444333
No 4
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=6.1e-32 Score=269.54 Aligned_cols=357 Identities=25% Similarity=0.434 Sum_probs=279.7
Q ss_pred CCchhHHHHHHHHHHHHHHHhhhhhHHHhHHhhhh----------------------hcCCCchhhHHHHHHHHHHHHHh
Q 012159 108 NIPQRYKLIGTTSLAFVICNMDKVNLSVAIIPMSH----------------------RFGWNSSVAGLVQSSFFWGYALS 165 (470)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~g~s~~~~~~~~~~~~~~~~~~ 165 (470)
..+.++.+..+++++..+.+.++..++...+.+.+ +++++..+.|++.+.+.+++.++
T Consensus 13 ~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~ 92 (465)
T TIGR00894 13 FCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIII 92 (465)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHH
Confidence 34456788888888888999999999999888766 78999999999999999999999
Q ss_pred hhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHH
Q 012159 166 QLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL-AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFV 244 (470)
Q Consensus 166 ~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~ 244 (470)
+++.|+++||+|+|+++.++.++.+++.++.... ..+++.+++.|+++|++.+...+....++.+++|+++|++++++.
T Consensus 93 ~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 172 (465)
T TIGR00894 93 QIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMS 172 (465)
T ss_pred HcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHH
Confidence 9999999999999999999998888887665432 244578999999999999999999999999999999999999999
Q ss_pred HhhhhhHHHHHHhhHHhhhccc-CchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhcc
Q 012159 245 FGGLSFGSVAGLLLAPPIIENL-GWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGES 323 (470)
Q Consensus 245 ~~~~~~g~~~g~~~~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (470)
..+..+|.+++|++++.+.+.. |||+.|++.+++.++..++++.++++++.......++++. ...+ ...++..+.
T Consensus 173 ~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~i~~---~~~~~~~~~ 248 (465)
T TIGR00894 173 TSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKK-YINS---SLQGQKGST 248 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHHH-HHHh---hcccccCCC
Confidence 9999999999999999999884 9999999999988777666666554433222111111110 0000 000001111
Q ss_pred CCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 012159 324 LKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (470)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~ 403 (470)
....+++++++++.+|...+..++.....+.+..|+|.|+++.+|++..+.+++.++..++.+++.++.|+++||+++|+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~ 328 (465)
T TIGR00894 249 RQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSK 328 (465)
T ss_pred CCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 22346899999999999999999999999999999999999999999999999999999999999999999999988664
Q ss_pred Ccch-----------------------------------------------------------------HHHHHHhhhhH
Q 012159 404 VETT-----------------------------------------------------------------MGITNTVGAVP 418 (470)
Q Consensus 404 ~~~~-----------------------------------------------------------------~g~~~~~~~~~ 418 (470)
.... .++.+..+.++
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l~ 408 (465)
T TIGR00894 329 TLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPRFLGFIKGITGLPGFIG 408 (465)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChhHHHHHHHHHHHHHHHH
Confidence 3210 77777888888
Q ss_pred HHHHHHHHHHhhccC--CceehhhHHHHHHHHHHHHHHHhhccCCCCCCCCCC
Q 012159 419 GIVGVALTGYLLDST--HSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFSTR 469 (470)
Q Consensus 419 ~~ig~~~~g~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (470)
+.++|.+.|++.+.. +.|...+.+.++..+ ++.+.+....+.+++++.++
T Consensus 409 ~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~-i~~i~~~~~~~~~~~~w~~~ 460 (465)
T TIGR00894 409 GLIASTLAGNILSQDSKNVWLIVFLIMAFVNI-LCVIFYLIFGSAERQDWAKE 460 (465)
T ss_pred HHHHHHhhheeeCCCCchHHHHHHHHHHHHHH-HHHHHeeeeecceecCCCCC
Confidence 888888888887654 335555555544433 44445555666666665443
No 5
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=4.7e-32 Score=265.31 Aligned_cols=291 Identities=19% Similarity=0.254 Sum_probs=229.8
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHH
Q 012159 111 QRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS 190 (470)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 190 (470)
.+|+.+..+++.+++.+++....+...|.+.+++|++..++|++.+++.+++.+++++.|++.||+|||+++..+.++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~ 84 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWG 84 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHH
Confidence 35788888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhc------
Q 012159 191 LATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE------ 264 (470)
Q Consensus 191 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~------ 264 (470)
++.++.+ ..++++.+++.|++.|++.+...+....++.+++|+++|++++++++.+..+|.++++++++++.+
T Consensus 85 ~~~~~~~-~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 163 (412)
T TIGR02332 85 IASTATM-FATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMA 163 (412)
T ss_pred HHHHHHH-HhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 9988875 567778999999999999999999999999999999999999999999999999999999998864
Q ss_pred ccCchHHHHHHHHHHHHHHHHH-HhhccCCCCCCCCCCCccchhhhhh--hhhhhHHhhhc--cCC----CCCHHHHhcC
Q 012159 265 NLGWESVFYIFGLLGIAWFSGF-KILQEGETSNGATLAPRSNYINMKK--SLSASLEEMGE--SLK----DVPWKAIFRS 335 (470)
Q Consensus 265 ~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~----~~~~~~~~~~ 335 (470)
..|||++|++.+++.++..++. ++++|++.. .+...++++....+. ......++.++ ... ...++.++ +
T Consensus 164 ~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 241 (412)
T TIGR02332 164 LKGWQWLFLLEGFPSVILGVMTWFWLDDSPDK-AKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-T 241 (412)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhhccCCCccc-CCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-C
Confidence 3699999999888876654444 444444322 111111111000000 00000000000 000 11233333 5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 012159 336 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE-LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (470)
Q Consensus 336 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~ 404 (470)
+.+|...+..++.....+.+.+|+|.|+++. .|++..+++.+.....++.++++++.|+++||+++|+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~ 311 (412)
T TIGR02332 242 PAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKH 311 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHH
Confidence 8888888888888888899999999999873 46788889999999999999999999999999987764
No 6
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=3.3e-31 Score=261.48 Aligned_cols=342 Identities=16% Similarity=0.179 Sum_probs=263.0
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHH
Q 012159 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (470)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (470)
++..+...++.+++.+++...++..+|.+.+++|++..+.|++.+++.+++.+++++.|+++||+|||+++.++.++.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~ 100 (434)
T PRK11663 21 RRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGI 100 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHH
Confidence 44566667777888888888889999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHH
Q 012159 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (470)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~ 271 (470)
+.++++ ..++++.+++.|++.|++.+...+...+++.+++|+++|++++++++.+..+|..++|++++++.+.+|||+.
T Consensus 101 ~~~~~~-~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~ 179 (434)
T PRK11663 101 INILFG-FSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYG 179 (434)
T ss_pred HHHHHH-HHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHH
Confidence 887775 4566788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-HHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCC-H-HHHhcCHHHHHHHHHHHHH
Q 012159 272 FYIFGLLGIAWFS-GFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVP-W-KAIFRSKAVWAMIYAHFCG 348 (470)
Q Consensus 272 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~l~~~~~ 348 (470)
|++.+++.++..+ ..+.+++++........++.+... .. ...+...+..+... + ...++++.+|.+.+..++.
T Consensus 180 f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (434)
T PRK11663 180 MMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDA--LE--LAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLV 255 (434)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccc--cc--cchhccccCCChhhhHHHHHhcChHHHHHHHHHHHH
Confidence 9998887655433 334444433221111000000000 00 00000000001111 1 2367789999988888888
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCCcch-------------------
Q 012159 349 SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLI--ATGVETT------------------- 407 (470)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~--~~~~~~~------------------- 407 (470)
......+..++|.|+++.+|++..+++...+...++.++++++.|++.||+. +|+....
T Consensus 256 ~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 335 (434)
T PRK11663 256 YVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFA 335 (434)
T ss_pred HHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccc
Confidence 8888888899999998788999999999999999999999999999999993 2222110
Q ss_pred ---------------------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHHHHH
Q 012159 408 ---------------------------------------MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFY 448 (470)
Q Consensus 408 ---------------------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~ 448 (470)
.|+.+..+.+|.+++|.+.|++.|..+ +...+.+.+++.+
T Consensus 336 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g-~~~~f~~~~~~~~ 414 (434)
T PRK11663 336 SYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWH-WTGFFVVISIAAG 414 (434)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcc-cHHHHHHHHHHHH
Confidence 788888899999999999999999876 6666666655555
Q ss_pred HHHHHHHhhcc
Q 012159 449 LTGTIVWLAFA 459 (470)
Q Consensus 449 ~~~~~~~~~~~ 459 (470)
+.+...+...+
T Consensus 415 ~~~~~~~~~~~ 425 (434)
T PRK11663 415 ISALLLLPFLN 425 (434)
T ss_pred HHHHHHHHHHh
Confidence 55444443333
No 7
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-31 Score=260.01 Aligned_cols=322 Identities=34% Similarity=0.640 Sum_probs=273.2
Q ss_pred hhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHHHHhhccCc
Q 012159 142 HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAG-FMPGLVLSRVLVGIGEGVS 220 (470)
Q Consensus 142 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~ 220 (470)
.+++++..+-+++.+.+..|+++++++.|+++||+|.|+++..+.++.+++.++.+.... +++.+++.|+++|++.|..
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~ 145 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVL 145 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHH
Confidence 368889999999999999999999999999999999999999999999999988876543 3457899999999999999
Q ss_pred hhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcc-cCchHHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 012159 221 PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-LGWESVFYIFGLLGIAWFSGFKILQEGETSNGAT 299 (470)
Q Consensus 221 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (470)
+|+...+.++|.|++||++..++...+..+|.+++.+++|++.+. +||+++|++.++++++..++++.+..+.+.+.+.
T Consensus 146 ~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~ 225 (466)
T KOG2532|consen 146 FPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPN 225 (466)
T ss_pred HhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCCC
Confidence 999999999999999999999999999999999999999999998 9999999999999999988888887766665443
Q ss_pred CCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHH
Q 012159 300 LAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSI 379 (470)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~ 379 (470)
..++|.... .....++..++....||+++++++.+|...+..++.+++.+.+..+.|.|+++.+|++..+.|++.+
T Consensus 226 is~~El~~I----~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~sa 301 (466)
T KOG2532|consen 226 ISEKELKYI----EKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSA 301 (466)
T ss_pred CCHHHHHHH----HhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHH
Confidence 333322111 0111111111225789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcch----------------------------------------------------
Q 012159 380 LPPLASVLVTSIAAQFADNLIATGVETT---------------------------------------------------- 407 (470)
Q Consensus 380 ~~~~~~~~~~~~~g~l~dr~~~~~~~~~---------------------------------------------------- 407 (470)
++.+...+..+++|.++||+..| .+..
T Consensus 302 lP~l~~~~~k~~~g~lsD~l~~~-~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~ 380 (466)
T KOG2532|consen 302 LPFLAMAIVKFVAGQLSDRLTFR-ILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFY 380 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc-cCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhH
Confidence 99999999999999999999886 2221
Q ss_pred --------------HHHHHHhhhhHHHHHHHHHHHhhcc--CCceehhhHHHHHHHHHHHHHHHhhccCCCCCCCCCC
Q 012159 408 --------------MGITNTVGAVPGIVGVALTGYLLDS--THSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFSTR 469 (470)
Q Consensus 408 --------------~g~~~~~~~~~~~ig~~~~g~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (470)
+|+.+.++.+.++++|.+.|.+... ...|...|++.++ ..+++.+.|.++.+.++|+|+++
T Consensus 381 ~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~-i~~~~~i~f~~f~s~e~~~w~~~ 457 (466)
T KOG2532|consen 381 KNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAG-ILIVGNIIFLFFGSGEPAPWTKS 457 (466)
T ss_pred hhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHH-HHHHhchheeEeecCcccCccCC
Confidence 8899999999999999999999842 2356666666554 45556688899989999988754
No 8
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=4.2e-31 Score=257.51 Aligned_cols=316 Identities=18% Similarity=0.168 Sum_probs=249.8
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHH
Q 012159 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (470)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (470)
+|..++.+.++.++.........+.+|.+.+++|.+..+.|++.+.+.+++.++++++|++.||+|||+++..+.++.++
T Consensus 7 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 86 (390)
T PRK03545 7 AWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIA 86 (390)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 34444444554444434444455668999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHH
Q 012159 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (470)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~ 271 (470)
+.+++. ..++++.+++.|++.|++.+...+...+++.+++|+++|++++|++..+..+|.+++|++++.+.+++|||++
T Consensus 87 ~~~~~~-~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~ 165 (390)
T PRK03545 87 SHVLSA-LAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTT 165 (390)
T ss_pred HHHHHH-HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHH
Confidence 887774 5677799999999999999888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHH
Q 012159 272 FYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWG 351 (470)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 351 (470)
|++.+++.++..+..+...+++++++ +.. ..+.++.+++|.++...+..++....
T Consensus 166 f~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (390)
T PRK03545 166 FLAIGGGALITLLLLIKLLPLLPSEH-----SGS--------------------LKSLPLLFRRPALVSLYLLTVVVVTA 220 (390)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCC-----cch--------------------HHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 99998887665544433322211100 000 01235788899888777766666666
Q ss_pred HHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch------------------------
Q 012159 352 HYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT------------------------ 407 (470)
Q Consensus 352 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~------------------------ 407 (470)
.+....+.+.|+++.+|++..+++.+.....++.++++++.|++.||+++|.....
T Consensus 221 ~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 300 (390)
T PRK03545 221 HFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLIAIALLLVCLLLLLPAANSEWHLSVL 300 (390)
T ss_pred HHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhchHHHHHHH
Confidence 66677888888888889999999999999999999999999999999987754322
Q ss_pred ------------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHHHHHHHHHHH
Q 012159 408 ------------------------------MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIV 454 (470)
Q Consensus 408 ------------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (470)
.|..+....+|..+||.+.|++.|..+ +...+...+.+..+.....
T Consensus 301 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g-~~~~~~~~~~~~~~~~~~~ 376 (390)
T PRK03545 301 SIFWGIAIMCIGLAMQVKVLKLAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHLG-LSSIGYVGAALALAALVWS 376 (390)
T ss_pred HHHHHHHHhcchHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hhHHHHHHHHHHHHHHHHH
Confidence 577777888899999999999999875 4455555544444433333
No 9
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=4.5e-31 Score=257.04 Aligned_cols=329 Identities=13% Similarity=0.162 Sum_probs=265.4
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHH
Q 012159 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (470)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (470)
+|.....++++.+..... ...++.+|.+.+++|++..+.+++.+++.+++.+++++.|+++||+|||+++..+.+++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~-~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~ 86 (393)
T PRK09705 8 NFMLLVLVLIGLNMRPLL-TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAV 86 (393)
T ss_pred HHHHHHHHHHHHHcchhh-hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHH
Confidence 445555555544443333 6677889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhccc-CchH
Q 012159 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-GWES 270 (470)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-g~~~ 270 (470)
+.++++ ..++++.+++.|++.|++.+...+....++.+++| ++|+++++++..+..+|..+|+.+++++.++. +||+
T Consensus 87 ~~~~~~-~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~ 164 (393)
T PRK09705 87 GALMRE-LYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQ 164 (393)
T ss_pred HHHHHH-HCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 998886 56667899999999999999999999999999997 88999999999999999999999999998875 8999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHH
Q 012159 271 VFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSW 350 (470)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 350 (470)
.+.+.++..++..+..+...+++++.+.+ + + ...++.+++++.|...+..++...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~---------------------~~~~~~l~~~~~~~l~~~~~~~~~ 219 (393)
T PRK09705 165 TLAWWALPAVVALFAWWWQSAREVASSHK--T--T---------------------TTPVRVVFTPRAWTLGVYFGLING 219 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccccC--C--C---------------------cCCcccccCHhHHHHHHHHHHHHH
Confidence 88877666554443333332222111000 0 0 011345677888888877777788
Q ss_pred HHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch-----------------------
Q 012159 351 GHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT----------------------- 407 (470)
Q Consensus 351 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~----------------------- 407 (470)
.+.....++|.|+++ +|++..+++.+.++..++.++++++.+++.||+++|+....
T Consensus 220 ~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 298 (393)
T PRK09705 220 GYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLW 298 (393)
T ss_pred HHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHH
Confidence 888899999999986 79999999999999999999999999999999998865543
Q ss_pred --------------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHHHHHHHHHHHH
Q 012159 408 --------------------------------MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVW 455 (470)
Q Consensus 408 --------------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (470)
.|..+.++.++..++|.+.|++.|..+.+...+.+..+..++.....+
T Consensus 299 ~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 378 (393)
T PRK09705 299 AMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITL 378 (393)
T ss_pred HHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH
Confidence 677788888999999999999999988888877777766666666667
Q ss_pred hhccCCCCCCCCCC
Q 012159 456 LAFASSKPQNFSTR 469 (470)
Q Consensus 456 ~~~~~~~~~~~~~~ 469 (470)
....++.++++.|+
T Consensus 379 ~~~~~~~~~~~~~~ 392 (393)
T PRK09705 379 RFAPARFPQLWVKE 392 (393)
T ss_pred Hhccccccchhccc
Confidence 77777777776655
No 10
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=4.4e-31 Score=257.78 Aligned_cols=330 Identities=28% Similarity=0.469 Sum_probs=262.7
Q ss_pred HHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhH
Q 012159 123 FVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGF 202 (470)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 202 (470)
+++..++...++...|.+.+++|.+..+.+++.+++.++..++.++.|+++||+|||+++.++.++.+++..+++ ..++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~-~~~~ 81 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQA-FAGA 81 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHH-HHcC
Confidence 456677888888999999999999999999999999999999999999999999999999999998888887775 4557
Q ss_pred HHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHH
Q 012159 203 MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAW 282 (470)
Q Consensus 203 ~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~ 282 (470)
++.+++.|++.|++.+...+....++.|++|+++|++++++.+....+|..++|.+++.+.+..+||+.|++.+++.++.
T Consensus 82 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 161 (399)
T TIGR00893 82 YVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIW 161 (399)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999988887666
Q ss_pred HHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012159 283 FSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTY 362 (470)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 362 (470)
.+..+...++++++++...++++.....+...+..++..+..+....++.+++|+++...+..++..........+.|.|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (399)
T TIGR00893 162 GVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTY 241 (399)
T ss_pred HHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 55554443333222111111111000000000000111122233456788999999999999999999999999999999
Q ss_pred HHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch-----------------------------------
Q 012159 363 FSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT----------------------------------- 407 (470)
Q Consensus 363 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~----------------------------------- 407 (470)
+++.+|.++.+.+++.....++.+++.++.|++.||+++|+....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (399)
T TIGR00893 242 LVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVAL 321 (399)
T ss_pred HHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHH
Confidence 998899999999999999999999999999999999999961110
Q ss_pred ---------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHHHHHHHHHH
Q 012159 408 ---------------------------MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTI 453 (470)
Q Consensus 408 ---------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 453 (470)
.++.+....++..++|.+.|++.+..+.+...+.+.++..++....
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 394 (399)
T TIGR00893 322 GFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALS 394 (399)
T ss_pred HHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHH
Confidence 7888888899999999999999998775666666555544444333
No 11
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=2e-30 Score=252.91 Aligned_cols=328 Identities=17% Similarity=0.187 Sum_probs=257.1
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHH
Q 012159 111 QRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS 190 (470)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 190 (470)
++++..+..++.+++........+..+|.+.+++|++..+.+++.+.+.+++.++++++|++.||+|||+++..+.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~ 83 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMI 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 35677778888888888888889999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhc-ccCch
Q 012159 191 LATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-NLGWE 269 (470)
Q Consensus 191 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~g~~ 269 (470)
++.++.+ ..++++.+++.|++.|++.+...+...+++.+++|+++|+++++..+....+|..++|.+.+.+.. ..|||
T Consensus 84 i~~~l~~-~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~ 162 (394)
T PRK03699 84 LAVAGLM-FSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWY 162 (394)
T ss_pred HHHHHHH-HcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHH
Confidence 8887775 456678899999999999998888999999999998999999999999999999999999888764 57999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHH
Q 012159 270 SVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGS 349 (470)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 349 (470)
+.|++.+++.++..+..+....++.++ +. .++++ ... +. ..++.++...+..++..
T Consensus 163 ~~f~~~~~~~~~~~~~~~~~~~p~~~~-~~-~~~~~-----------------~~~----~~-~~~~~~~~~~~~~~~~~ 218 (394)
T PRK03699 163 WVYACIGLVYVAIFILTLFSEFPALGK-HA-PKADK-----------------PVA----KE-KWGIGVLFLAIAALLYI 218 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccccc-cC-ccccC-----------------ccc----cc-cCChHHHHHHHHHHHHH
Confidence 999998887766554443322111111 00 00000 000 11 12466777777777777
Q ss_pred HHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch----------------------
Q 012159 350 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT---------------------- 407 (470)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~---------------------- 407 (470)
...+.+..|+|.|+++.+|+++.+.+.+.+...++..+++++.|++.||+++|+....
T Consensus 219 ~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 298 (394)
T PRK03699 219 LAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLL 298 (394)
T ss_pred HHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHH
Confidence 7788889999999998899999999999999999999999999999999999876654
Q ss_pred --------------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHHHHHHH-HHHH
Q 012159 408 --------------------------------MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLT-GTIV 454 (470)
Q Consensus 408 --------------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~-~~~~ 454 (470)
.+.....+.+|..++|.+.|++.+..+.. ..++..+++..++ ....
T Consensus 299 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~-~~~~~~~~~~~~~~~~~~ 377 (394)
T PRK03699 299 YAILGLGFFSSAIYTTIITLGSQQTKVASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQ-AALLTANGLYAVVFVMCI 377 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCch-hhhhhhHHHHHHHHHHHH
Confidence 56667777889999999999999987644 4444333333333 3334
Q ss_pred HhhccCCCCC
Q 012159 455 WLAFASSKPQ 464 (470)
Q Consensus 455 ~~~~~~~~~~ 464 (470)
.....+++.|
T Consensus 378 ~~~~~~~~~~ 387 (394)
T PRK03699 378 LLGFVSKHRQ 387 (394)
T ss_pred HHHHHHHHHh
Confidence 4444444444
No 12
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=4.3e-30 Score=249.51 Aligned_cols=312 Identities=15% Similarity=0.234 Sum_probs=250.7
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHH
Q 012159 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (470)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (470)
+.+..+.+..+..........+.+|.+.+++|.+..+.|++.+.+.+++.++++++|+++||+|||+++.++.++.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 82 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGN 82 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHH
Confidence 34556666777777888888899999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHH
Q 012159 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFY 273 (470)
Q Consensus 194 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~ 273 (470)
++++ ..++++.+++.|++.|++.+...+....++.+++++++|++++++...+..+|..++|++++++.+..|||++|+
T Consensus 83 ~l~~-~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~ 161 (382)
T PRK10091 83 AMFT-LSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFL 161 (382)
T ss_pred HHHH-HhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHH
Confidence 7774 567779999999999999998888889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-HhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHH
Q 012159 274 IFGLLGIAWFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGH 352 (470)
Q Consensus 274 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 352 (470)
+.+++.++..+.. ..+|+.+++ . +.+. + ...+.++++..|...+..++.....
T Consensus 162 ~~~~~~~~~~~~~~~~lp~~~~~--~---~~~~-----~----------------~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (382)
T PRK10091 162 LIAVFNIAVLASIYFWVPDIRDE--A---KGGL-----R----------------EQFHFLRSPAPWLIFAATMFGNAGV 215 (382)
T ss_pred HHHHHHHHHHHHHHHhCCCCCcc--c---ccCH-----H----------------HHHHHhcChHHHHHHHHHHHHHHHH
Confidence 9888766554433 334432211 0 0000 0 0023567777777666655555555
Q ss_pred HHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch-------------------------
Q 012159 353 YTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT------------------------- 407 (470)
Q Consensus 353 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~------------------------- 407 (470)
+....+++.|+++.+|+++.+.+++.....++.++++++.+++.||+++++....
T Consensus 216 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 295 (382)
T PRK10091 216 FAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIF 295 (382)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 5566677888887789999999999999999999999999999999998876553
Q ss_pred ------------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHHHHHHHHH
Q 012159 408 ------------------------------MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGT 452 (470)
Q Consensus 408 ------------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 452 (470)
.+..+....+|..+||.+.|++.|..+++...+.+.+++..+...
T Consensus 296 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~ 370 (382)
T PRK10091 296 AFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMS 370 (382)
T ss_pred HHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHH
Confidence 223356678999999999999999777777777765544444333
No 13
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.98 E-value=5.6e-30 Score=261.51 Aligned_cols=186 Identities=14% Similarity=0.165 Sum_probs=163.2
Q ss_pred CchhHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHH
Q 012159 109 IPQRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLI 188 (470)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 188 (470)
.+..|.++.+++++.+...++...++..+|.+.+++|++..+.+++.+++.++.+++.+++|+++||+|||++++++.++
T Consensus 162 ~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil 241 (742)
T TIGR01299 162 GRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSV 241 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 34466777777778888888888899999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcc---
Q 012159 189 WSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN--- 265 (470)
Q Consensus 189 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~--- 265 (470)
.+++.++.+ +.++++.++++|++.|++.++..+...+++.|++|+++|++.++++..+..+|.++++.++..+...
T Consensus 242 ~~i~~ll~a-fa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~ 320 (742)
T TIGR01299 242 NGFFAFFSS-FVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGW 320 (742)
T ss_pred HHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 888887775 5567789999999999999999999999999999999999999999999999999999888776543
Q ss_pred ----------cCchHHHHHHHHHHHHHHHHHHhhccCCCC
Q 012159 266 ----------LGWESVFYIFGLLGIAWFSGFKILQEGETS 295 (470)
Q Consensus 266 ----------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (470)
.+||+.+++.++..++.++..+++||+++.
T Consensus 321 ~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrw 360 (742)
T TIGR01299 321 SFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRF 360 (742)
T ss_pred hhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 358999988888777777777788887654
No 14
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.98 E-value=2e-29 Score=247.17 Aligned_cols=326 Identities=22% Similarity=0.297 Sum_probs=255.7
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHH
Q 012159 111 QRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS 190 (470)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 190 (470)
++|..+...++..++..++....+...|.+.+++|.++.+.+++.+.+.++..++.++.|+++||+|||+++..+.++.+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 91 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFG 91 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 46777778888888999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchH
Q 012159 191 LATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWES 270 (470)
Q Consensus 191 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~ 270 (470)
++.+++. ..++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+|++
T Consensus 92 ~~~~~~~-~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 170 (406)
T PRK11551 92 LFSLATA-QAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRH 170 (406)
T ss_pred HHHHHHH-HhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHH
Confidence 8776664 456778999999999999999999999999999999999999999999999999999999999988899999
Q ss_pred HHHHHHHHHHHHHHHH-HhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhc---CHHHHHHHHHHH
Q 012159 271 VFYIFGLLGIAWFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFR---SKAVWAMIYAHF 346 (470)
Q Consensus 271 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~ 346 (470)
.|++.+++.++..+.. .+++++++....+..++++ + ...+..++ .+..+...+..+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~---------------~~~~~~~~~~~~~~~~~~~~~~~ 230 (406)
T PRK11551 171 IFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQR-----A---------------PVLRALFGEGRATATLLLWISYF 230 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhh-----h---------------hhHHHHhhhhhhhHHHHHHHHHH
Confidence 9999887655544433 3345443221111000000 0 00011111 223344444455
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch-------------------
Q 012159 347 CGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT------------------- 407 (470)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~------------------- 407 (470)
+.....+....+.|.|+++ .|+++.+.+.+.....++.++++++.|++.||+++++....
T Consensus 231 ~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (406)
T PRK11551 231 FTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFA 309 (406)
T ss_pred HHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHH
Confidence 5555666777889999986 69999999999999999999999999999999998876543
Q ss_pred ------------------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHHHHHHHH
Q 012159 408 ------------------------------------MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTG 451 (470)
Q Consensus 408 ------------------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 451 (470)
.|+.+....++..++|.+.|++.+..+.+...+.....+.+...
T Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 389 (406)
T PRK11551 310 GMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAA 389 (406)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHH
Confidence 77888889999999999999999887666655555554444444
Q ss_pred HHHHhhc
Q 012159 452 TIVWLAF 458 (470)
Q Consensus 452 ~~~~~~~ 458 (470)
...+...
T Consensus 390 ~~~~~~~ 396 (406)
T PRK11551 390 LAALLLV 396 (406)
T ss_pred HHHHHHh
Confidence 4444343
No 15
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.98 E-value=2.9e-29 Score=249.91 Aligned_cols=276 Identities=14% Similarity=0.138 Sum_probs=212.9
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHH
Q 012159 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (470)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (470)
+++.+....+..++.........+..|.+.+++|++..+.+++.+.+.+++.+++++.|+++||+|||+++..+.+++++
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~ 113 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAP 113 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 34555555566666677777788889999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhc-------
Q 012159 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE------- 264 (470)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~------- 264 (470)
+.++.+ ..++++.+++.|++.|++.+... ....++++++|+++|++++|+.+...++|..+++.+.+.+..
T Consensus 114 ~~~~~~-~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~ 191 (476)
T PLN00028 114 AVFCMS-LVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGA 191 (476)
T ss_pred HHHHHH-HhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 877665 45566888899999999987654 456788999999999999999988777777777666654422
Q ss_pred --ccCchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHH
Q 012159 265 --NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMI 342 (470)
Q Consensus 265 --~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (470)
..|||+.|++.+++.++..+..++++++.++.... +.+ +. .+.++......+++.++++++|.+.
T Consensus 192 ~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~~--~~~------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (476)
T PLN00028 192 PSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNYR--ELK------KS-----GTMPKDSFSKVLRYGVTNYRTWILA 258 (476)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCchh--hHH------hc-----CccccccHHHHHHHHHcCchhHHHH
Confidence 25899999999998877666666665443321100 000 00 0000000011346678889998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 012159 343 YAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (470)
Q Consensus 343 l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~ 402 (470)
+..++.......+..++|.|+.+.+|++...++.+.++..++.++++++.|+++||+++|
T Consensus 259 ~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r 318 (476)
T PLN00028 259 LTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARR 318 (476)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHh
Confidence 777766666677788899999888899999999999999999999999999999999876
No 16
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.98 E-value=4.2e-30 Score=236.49 Aligned_cols=327 Identities=21% Similarity=0.282 Sum_probs=283.0
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHH
Q 012159 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (470)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (470)
.++.+++..++..+.+..++.+++..+.+.+++|+|+.|.+++.++..+...+..++.|.+.||+|.|++..++.++..+
T Consensus 12 ~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~I 91 (417)
T COG2223 12 ARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLI 91 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHH
Confidence 46778888888889999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHhh--hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccC--
Q 012159 192 ATALLPLLA--GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-- 267 (470)
Q Consensus 192 ~~~~~~~~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-- 267 (470)
..+..++.. ++++.+++++++.|++ |+.+......++.+||++++|.++|++. ..++|..+..+++..+....|
T Consensus 92 P~~~~~~a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~ 169 (417)
T COG2223 92 PCLGLAFAVTYPSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFL 169 (417)
T ss_pred HHHHHHHHccCCchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhH
Confidence 877765443 3346999999999999 5566888999999999999999999999 999999999999999998888
Q ss_pred -chHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHH
Q 012159 268 -WESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHF 346 (470)
Q Consensus 268 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 346 (470)
|+.+..+..+..++..+..++..++.++.+...++.. ..+++.++++++.|.+.+.++
T Consensus 170 ~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~---------------------~~~~~~v~~~~~~W~lsllY~ 228 (417)
T COG2223 170 AWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL---------------------PAQLKAVFSNKDTWLLSLLYF 228 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc---------------------hhHHHHHhcCcchHHHHHHHH
Confidence 9999999888887776666666555444211111100 023577889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch-------------------
Q 012159 347 CGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT------------------- 407 (470)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~------------------- 407 (470)
....++.++..++|.|+++++|.++.++|.+.....+.+.+.+.++|+++||+|.++....
T Consensus 229 ~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~ 308 (417)
T COG2223 229 ATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGF 308 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHcccccc
Confidence 9999999999999999999999999999999999999999999999999999999887665
Q ss_pred ------------------------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHH
Q 012159 408 ------------------------------------------MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSI 445 (470)
Q Consensus 408 ------------------------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~ 445 (470)
.|++..++.+|+..-|...|...+.++.+...+.+...
T Consensus 309 ~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~ 388 (417)
T COG2223 309 GHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLA 388 (417)
T ss_pred ccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHH
Confidence 88889999999999999999999999988888888888
Q ss_pred HHHHHHHHHHhhccCC
Q 012159 446 FFYLTGTIVWLAFASS 461 (470)
Q Consensus 446 ~~~~~~~~~~~~~~~~ 461 (470)
..+++....+..+.+.
T Consensus 389 ~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 389 FYLVALVLTWALYARR 404 (417)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 7777777777777765
No 17
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.98 E-value=1.7e-29 Score=253.11 Aligned_cols=292 Identities=17% Similarity=0.128 Sum_probs=235.3
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHH
Q 012159 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (470)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (470)
+|..+..++++.++..++.++++..+|.+.+++|.+..+.+|+.+.+.++..++.+++|+++||+|||++++++.+++++
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~ 83 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGL 83 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 56788889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhcc-CccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchH
Q 012159 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSI-PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWES 270 (470)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~ 270 (470)
+.++++ ..++++.++++|+++|++.+...+.....+.+.+ |+++|++++|++.....+|..+||++++++.++.||||
T Consensus 84 ~~~~~~-~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~ 162 (495)
T PRK14995 84 ASLAAA-FSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGS 162 (495)
T ss_pred HHHHHH-HcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHH
Confidence 988875 5677799999999999999998888888887776 67899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHh-hccCCCCCCCCCCCccchhh-----------hh---hhhhh------------------hH
Q 012159 271 VFYIFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNYIN-----------MK---KSLSA------------------SL 317 (470)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----------~~---~~~~~------------------~~ 317 (470)
.|++...+.++..++.+. +++++. ++.+..+...... .. +.... ..
T Consensus 163 ~f~i~~~~~~~~~~l~~~~l~~~~~-~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~ 241 (495)
T PRK14995 163 VFLINVPIVLVVMGLTARYVPRQAG-RRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIR 241 (495)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCC-CCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHH
Confidence 999988776655444433 443322 1111111000000 00 00000 00
Q ss_pred HhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 012159 318 EEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFAD 397 (470)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d 397 (470)
.+.....+..+ .+++++|.++...+..++.....++...++|.|++..+|+++.++|++.....++..++.++.|++.|
T Consensus 242 ~e~~~~~p~~~-~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~ 320 (495)
T PRK14995 242 TQLAASRPMID-MRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVS 320 (495)
T ss_pred HHhcCCCCCcC-HHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111112222 46889999988888888888888888899999999999999999999999999999999999999999
Q ss_pred HHHhcCCcc
Q 012159 398 NLIATGVET 406 (470)
Q Consensus 398 r~~~~~~~~ 406 (470)
|+++|+...
T Consensus 321 r~g~~~~~~ 329 (495)
T PRK14995 321 RLGLRLVAT 329 (495)
T ss_pred HcCchHHHH
Confidence 999876544
No 18
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.97 E-value=3.8e-29 Score=241.53 Aligned_cols=322 Identities=15% Similarity=0.159 Sum_probs=254.0
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHhHHhhhh-hcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHH
Q 012159 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSH-RFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS 190 (470)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 190 (470)
.++.+....+++++.+.....+++..+.+.+ ++|++..|.+++.+++.+++.+++++.|++.||+|.|+++.++.++.+
T Consensus 32 a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~ 111 (462)
T PRK15034 32 ARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILI 111 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 3567888888899999999999999888766 899999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHh----hhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhh---
Q 012159 191 LATALLPLL----AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII--- 263 (470)
Q Consensus 191 ~~~~~~~~~----~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--- 263 (470)
+..++.++. .++++.+++.|++.|++ +..++.....+++++|+++||+++|+.....++|..++++++..+.
T Consensus 112 i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~ 190 (462)
T PRK15034 112 IPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVP 190 (462)
T ss_pred HHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 888777543 16779999999999998 7788999999999999999999999997777777766655554433
Q ss_pred --c-------------ccCchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCC
Q 012159 264 --E-------------NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVP 328 (470)
Q Consensus 264 --~-------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (470)
+ ..+|+.+.++..++.++..+..++..++.+..+. . ...
T Consensus 191 l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~~~---~-----------------------~~~ 244 (462)
T PRK15034 191 VFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASSRA---S-----------------------IAD 244 (462)
T ss_pred HHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccc---C-----------------------HHH
Confidence 2 2347777778777776666555555443322100 0 012
Q ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch-
Q 012159 329 WKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT- 407 (470)
Q Consensus 329 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~- 407 (470)
...++|+|+.|.+.+.+++.+..+.++..++|.|+++.+ +.........+..+...+.++++|+++||+|+++....
T Consensus 245 ~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~ 322 (462)
T PRK15034 245 QLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLIN 322 (462)
T ss_pred HHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHH
Confidence 367899999999999999999999989999999998754 33333333445668888999999999999999875543
Q ss_pred --------------------------------------------------------------------------------
Q 012159 408 -------------------------------------------------------------------------------- 407 (470)
Q Consensus 408 -------------------------------------------------------------------------------- 407 (470)
T Consensus 323 ~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 402 (462)
T PRK15034 323 FIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAA 402 (462)
T ss_pred HHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHH
Confidence
Q ss_pred -HHHHHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHHHHHHHHHHHHhhccCCC
Q 012159 408 -MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSK 462 (470)
Q Consensus 408 -~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (470)
.|+....+.+|+.+-|.+.|...+.++.+...+....+..+++..+.|..+.++.
T Consensus 403 v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~r~~ 458 (462)
T PRK15034 403 ALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGRRK 458 (462)
T ss_pred HHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 1344466677777888888999988888888888888888888877777776654
No 19
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.97 E-value=2.3e-28 Score=237.85 Aligned_cols=297 Identities=17% Similarity=0.205 Sum_probs=233.8
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHH
Q 012159 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (470)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (470)
.|+.+..+.++.+............+|.+.+++|.++.+.++..+++.++..+++++.|+++||+|||+++..+.++.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~ 97 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTL 97 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHH
Confidence 45555555555555555555566678899999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHH
Q 012159 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (470)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~ 271 (470)
+.+++. ..++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+.++|..++|++++++.+++|||+.
T Consensus 98 ~~~~~~-~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~ 176 (394)
T PRK10213 98 SCLLVS-FANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNV 176 (394)
T ss_pred HHHHHH-HHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHH
Confidence 887765 4677899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHh-hccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHH
Q 012159 272 FYIFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSW 350 (470)
Q Consensus 272 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 350 (470)
|++.+++.++..+.... .|+++++ . +.. ..+.++.+++|.+|...+..++...
T Consensus 177 f~~~~~l~~~~~l~~~~~~p~~~~~----~--~~~--------------------~~~~~~~l~~~~~~~~~~~~~~~~~ 230 (394)
T PRK10213 177 FNAAAVMGVLCIFWIIKSLPSLPGE----P--SHQ--------------------KQNTFRLLQRPGVMAGMIAIFMSFA 230 (394)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCcc----c--ccc--------------------hhHHHHHhcCHHHHHHHHHHHHHHH
Confidence 99988766554433322 2322110 0 000 0123567889999887777666666
Q ss_pred HHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch-----------------------
Q 012159 351 GHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT----------------------- 407 (470)
Q Consensus 351 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~----------------------- 407 (470)
..+....+++.++.+.+|+++...+.+....+++.+++.++.+++.||.+++.....
T Consensus 231 ~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 310 (394)
T PRK10213 231 GQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATG 310 (394)
T ss_pred HHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 666666676443445679999999999999999999999999999999544322211
Q ss_pred -------------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCc
Q 012159 408 -------------------------------MGITNTVGAVPGIVGVALTGYLLDSTHS 435 (470)
Q Consensus 408 -------------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~ 435 (470)
.+.......++..+|+.++|++.|..+.
T Consensus 311 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~ 369 (394)
T PRK10213 311 VAIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGL 369 (394)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCh
Confidence 3344556678889999999999987653
No 20
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.97 E-value=4.3e-29 Score=244.77 Aligned_cols=296 Identities=15% Similarity=0.189 Sum_probs=221.2
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHH
Q 012159 110 PQRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIW 189 (470)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 189 (470)
+++|+.+..++++++...++....++..|.+.+++|++..+.+++.+++.++..+++++.|+++||+|||+++.++.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~ 87 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLF 87 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 34678888899999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccC--
Q 012159 190 SLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-- 267 (470)
Q Consensus 190 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-- 267 (470)
+++.+++. ..++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++++.+++.+.+..+
T Consensus 88 ~~~~~~~~-~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~ 166 (405)
T TIGR00891 88 SAGTLACG-FAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDG 166 (405)
T ss_pred HHHHHHHH-HhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 88887775 456678999999999999999999999999999999999999999999999999999999999988776
Q ss_pred chHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCC--CCCHHHHh-cCH-HHHHHHH
Q 012159 268 WESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLK--DVPWKAIF-RSK-AVWAMIY 343 (470)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~-~~~~~~l 343 (470)
||+.|++.++..++..+.....+++++..+....++.......+..... ...+...+ ....++.. +++ .+....+
T Consensus 167 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (405)
T TIGR00891 167 WRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGE-HRIANIVMTLAAAMVQSAGKRWPTFVYLVV 245 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccc-hhhhhhhhhhhHHhhhhhhhhhHHHHHHHH
Confidence 9999988766655555444445544321111110000000000000000 00000000 00001111 111 1222333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch
Q 012159 344 AHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT 407 (470)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~ 407 (470)
...+..........++|.|+.+.+|++..+.+.+.....++.++++++.+++.||+++|+....
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~ 309 (405)
T TIGR00891 246 LVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVC 309 (405)
T ss_pred HHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHH
Confidence 3344444455667788999988889999999999999999999999999999999999886543
No 21
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.97 E-value=2.5e-28 Score=240.97 Aligned_cols=273 Identities=15% Similarity=0.197 Sum_probs=208.5
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcC---CCchhhHHHH---HHHHHHHHHhhhhhHHHhhhhcCcHHHHHH
Q 012159 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFG---WNSSVAGLVQ---SSFFWGYALSQLPGGWLAKIFGGRKVLQTG 185 (470)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~s~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 185 (470)
+++.+...+++.++..++...++...|.+.++++ .+..+.+... +...++..++++++|+++||+|||+++.++
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~ 99 (432)
T PRK10406 20 RIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLIS 99 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 3445666677888999999999999999999984 4555444444 444455559999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhH-------HHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhh
Q 012159 186 VLIWSLATALLPLLAGF-------MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLL 258 (470)
Q Consensus 186 ~~~~~~~~~~~~~~~~~-------~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 258 (470)
.++++++.+++++.++. ...++++|+++|++.|..++...+++.|++|+++|+++.++.+.+...|.++++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~ 179 (432)
T PRK10406 100 VCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLV 179 (432)
T ss_pred HHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999998887543322 23688999999999999999999999999999999999999988888888888876
Q ss_pred HHhhh--------cccCchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHH
Q 012159 259 APPII--------ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWK 330 (470)
Q Consensus 259 ~~~l~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (470)
...+. +.+|||++|++.+++.++.......++|+++.+ ++ +. .+..+++
T Consensus 180 ~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~-------~~-------------~~---~~~~~~~ 236 (432)
T PRK10406 180 VVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQE-------TR-------------AL---KEAGSLK 236 (432)
T ss_pred HHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHH-------Hh-------------hh---cccccHH
Confidence 65543 257999999987777665443322222221100 00 00 0122467
Q ss_pred HHhcCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch
Q 012159 331 AIFRSKAVWAMIYAHFCG-SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT 407 (470)
Q Consensus 331 ~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~ 407 (470)
+++++++.+...+...+. ....+....|+|.|+++.+|++..+.+....+..++..++..+.|+++||+++|+....
T Consensus 237 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~ 314 (432)
T PRK10406 237 GLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLC 314 (432)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHH
Confidence 888999888776655543 66677888999999988889999888888888888888999999999999998875443
No 22
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.97 E-value=7.1e-29 Score=244.92 Aligned_cols=311 Identities=18% Similarity=0.228 Sum_probs=240.2
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHH
Q 012159 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (470)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (470)
+++.+....+.++...++.....+..|.+.+++|+++.+.+++.+++.++..++++++|+++||+|||+++.++.++.++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~ 95 (426)
T PRK12307 16 QKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSV 95 (426)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 45667777788888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHH
Q 012159 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (470)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~ 271 (470)
+.++.+ ..++++.+++.|++.|++.+...+....++.|++|+++|++++++...+..+|.++++.+.+.+.+..|||+.
T Consensus 96 ~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~ 174 (426)
T PRK12307 96 GTGLSG-LASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAA 174 (426)
T ss_pred HHHHHH-HHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHH
Confidence 887775 5566789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHH---HH
Q 012159 272 FYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHF---CG 348 (470)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~ 348 (470)
|++..+..++........+++++..+.+..++. ...+.........++++++++.++...+... +.
T Consensus 175 f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (426)
T PRK12307 175 FFVGLLPVLLVIYIRARAPESKEWEEAKLSGKG-----------KHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSI 243 (426)
T ss_pred HHHHHHHHHHHHHHHHHCCCChHHHHhhhhccc-----------cccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHH
Confidence 987544333222211111221110000000000 0000000011124577888887765443322 22
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch---------------------
Q 012159 349 SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT--------------------- 407 (470)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~--------------------- 407 (470)
....+.+..++|.|+++ .|+++...+.+.+...++.++++++.|++.||+++|+....
T Consensus 244 ~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (426)
T PRK12307 244 FGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYL 322 (426)
T ss_pred HHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHH
Confidence 23334467789999986 59999999999999999999999999999999998865543
Q ss_pred ------------------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCc
Q 012159 408 ------------------------------------MGITNTVGAVPGIVGVALTGYLLDSTHS 435 (470)
Q Consensus 408 ------------------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~ 435 (470)
.|+.+..+.+++.++|.+.|++.+..+.
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~ 386 (426)
T PRK12307 323 LLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGL 386 (426)
T ss_pred HHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccH
Confidence 6677788888999999999999987763
No 23
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.97 E-value=1e-28 Score=245.07 Aligned_cols=330 Identities=18% Similarity=0.255 Sum_probs=239.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHH
Q 012159 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (470)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (470)
|.++..+++......+....++...|.+.++ |++..+.+++.+++.+++.++++++|+++||+|||++++++.++.+++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~ 106 (452)
T PRK11273 28 WQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAV 106 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHH
Confidence 4555555556666666666677788888888 999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHhh---hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHH-HHHhhHHhhhcccCc
Q 012159 193 TALLPLLA---GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSV-AGLLLAPPIIENLGW 268 (470)
Q Consensus 193 ~~~~~~~~---~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~~~~~l~~~~g~ 268 (470)
.+++++.. .+++.+++.|++.|++.+...+.....+.+++|+++|++++++++.+..+|.. ++|+++..+....||
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw 186 (452)
T PRK11273 107 MLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDW 186 (452)
T ss_pred HHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccH
Confidence 87765432 35678889999999999998888888999999999999999999999998864 556554444344599
Q ss_pred hHHHHHHHHHHHHHHH-HHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCC--HHHHhcCHHHHHHHHHH
Q 012159 269 ESVFYIFGLLGIAWFS-GFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVP--WKAIFRSKAVWAMIYAH 345 (470)
Q Consensus 269 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~ 345 (470)
|+.|++.+++.++..+ ..++++++++....... ++....... ...++..++.+..+ .+.+++++.+|...+..
T Consensus 187 ~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 262 (452)
T PRK11273 187 HAALYMPAFAAILVALFAFAMMRDTPQSCGLPPI--EEYKNDYPD--DYNEKHEQELTAKQIFMQYVLPNKLLWYIAIAN 262 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCCh--hhhhhcccc--ccccccCCCccHHHHHHHHHHcChHHHHHHHHH
Confidence 9999998887666543 44445544332111000 000000000 00000000000001 13467899999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcch----------------
Q 012159 346 FCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIA--TGVETT---------------- 407 (470)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~--~~~~~~---------------- 407 (470)
++.....+....++|.|+++..|++..+++.+..+..++.+++.++.|+++||+++ |.....
T Consensus 263 ~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~ 342 (452)
T PRK11273 263 VFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLN 342 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHh
Confidence 88888888889999999998889999999998889999999999999999999943 322111
Q ss_pred ------------------------------------------HHHHHHhhhhHHHH-HHHHHHHhhccCCceehhhHHHH
Q 012159 408 ------------------------------------------MGITNTVGAVPGIV-GVALTGYLLDSTHSWSMSLFAPS 444 (470)
Q Consensus 408 ------------------------------------------~g~~~~~~~~~~~i-g~~~~g~l~~~~~~~~~~~~~~~ 444 (470)
.|+.+..+.+++.+ +|.+.|++.|..+ +...+.+++
T Consensus 343 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g-~~~~f~~~~ 421 (452)
T PRK11273 343 PAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMI 421 (452)
T ss_pred cccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc-chHHHHHHH
Confidence 66666677777554 7899999998876 555555444
Q ss_pred HHHH
Q 012159 445 IFFY 448 (470)
Q Consensus 445 ~~~~ 448 (470)
..++
T Consensus 422 ~~~~ 425 (452)
T PRK11273 422 GGSI 425 (452)
T ss_pred HHHH
Confidence 4333
No 24
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.97 E-value=3.6e-28 Score=238.21 Aligned_cols=309 Identities=16% Similarity=0.135 Sum_probs=246.4
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHH
Q 012159 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (470)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (470)
.+.....+.+..++..+....+.+.+|.+.+++|.+..+.++..+.+.+++.+++++.|+++||+|||+++.++.++.++
T Consensus 11 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~ 90 (406)
T PRK15402 11 ALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFIL 90 (406)
T ss_pred HHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 44555566666777777888888889999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHH
Q 012159 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (470)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~ 271 (470)
+.++.. ..++++.+++.|++.|++.+...+...+.+.|++|+++|++++++......+|..+||.+++.+.++.+||+.
T Consensus 91 ~~~~~~-~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~ 169 (406)
T PRK15402 91 TCLAIL-LAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGM 169 (406)
T ss_pred HHHHHH-HHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHH
Confidence 877764 4566788999999999999988889999999999999999999999888889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHh-hccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHH
Q 012159 272 FYIFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSW 350 (470)
Q Consensus 272 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 350 (470)
|++.+++.++..+..+. .++++++.++ +... + + ...+++.++++|.++...+..++...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~----~---~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (406)
T PRK15402 170 FVLFAALAALSFFGLWRAMPETAGRVGE----KLSL----K---E---------LGRDYKLVLKNRRFVAGALALGLVSL 229 (406)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCccccc----cccH----H---H---------HHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 99988887665554433 3332211100 0000 0 0 01124678899999988887777766
Q ss_pred HHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch-----------------------
Q 012159 351 GHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT----------------------- 407 (470)
Q Consensus 351 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~----------------------- 407 (470)
.......+.|.|+++.+|+++.+.++......++.+++.++.+++.||+++|+....
T Consensus 230 ~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 309 (406)
T PRK15402 230 PLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAY 309 (406)
T ss_pred HHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccH
Confidence 666677778999888889999999988888888899999999999999998765432
Q ss_pred ------------------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCceehhhH
Q 012159 408 ------------------------------------MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLF 441 (470)
Q Consensus 408 ------------------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~ 441 (470)
.+..+....++..+|+.+.+.+.+..+.+...+.
T Consensus 310 ~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~ 379 (406)
T PRK15402 310 LWLTAGLSLYAFGIGLANAGLYRLTLFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLF 379 (406)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHH
Confidence 6666667777888888888888877665544333
No 25
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.97 E-value=1.8e-28 Score=237.86 Aligned_cols=265 Identities=17% Similarity=0.216 Sum_probs=211.4
Q ss_pred HHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhh
Q 012159 122 AFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAG 201 (470)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 201 (470)
...+.......+++..|.+.+++|++..+.+++.+++.++..++++++|+++||+|||+++.++.++.+++.++++ ..+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~-~~~ 89 (377)
T TIGR00890 11 IMCFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYA-IAD 89 (377)
T ss_pred HHHHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHH-HHH
Confidence 3333444466778889999999999999999999999999999999999999999999999999999988887775 567
Q ss_pred HHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHH
Q 012159 202 FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIA 281 (470)
Q Consensus 202 ~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~ 281 (470)
+++.+++.|++.|++.+...+.....+.+++| ++|++++++...+.++|..+++++.+.+.+..|||+.|++.+++.++
T Consensus 90 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 168 (377)
T TIGR00890 90 SLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLL 168 (377)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 77999999999999999888888888899887 68999999999999999988877777777888999999999988777
Q ss_pred HHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012159 282 WFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPT 361 (470)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 361 (470)
..+..+++.++++++..+.+.+.+ .+....++.++++.+|...+..++..........+.+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (377)
T TIGR00890 169 VIVLGAFLIGYPPGQLIKTNIEVS------------------VKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKP 230 (377)
T ss_pred HHHHHHHheecCchhccccCcccc------------------hhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 655554443322221111000000 00123467788888888877777776666666677777
Q ss_pred HHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch
Q 012159 362 YFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT 407 (470)
Q Consensus 362 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~ 407 (470)
|.+ .+|.+..+.+.+.....++.++++++.|++.||+++|+....
T Consensus 231 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~ 275 (377)
T TIGR00890 231 YGQ-SLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSI 275 (377)
T ss_pred HHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhH
Confidence 776 478888889999999999999999999999999999876544
No 26
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.97 E-value=3.8e-28 Score=236.50 Aligned_cols=272 Identities=18% Similarity=0.219 Sum_probs=224.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHH
Q 012159 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (470)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (470)
++.+..+....+........+.+.+|.+.+++|.+..+.+++.+++.++..++++++|+++||+|||+++..+.++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 83 (385)
T TIGR00710 4 KAFALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALS 83 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHH
Confidence 34444555555666677788888899999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHH
Q 012159 193 TALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF 272 (470)
Q Consensus 193 ~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~ 272 (470)
.+++. ..++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.++.+||+.|
T Consensus 84 ~~~~~-~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 162 (385)
T TIGR00710 84 SLGLA-LSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIF 162 (385)
T ss_pred HHHHH-HHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 87774 45667889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHh-hccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHH
Q 012159 273 YIFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWG 351 (470)
Q Consensus 273 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 351 (470)
++.+++.++..+..++ .+++++.+++ ++.+ . ....+++.+++|+++...+...+....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---------~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (385)
T TIGR00710 163 AFLSLAGILLSALIFFILPETLPYEAR---IQIS---------T---------YFETFLLLLKSKMFWGYALIYGASFGG 221 (385)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCccc---CCHH---------H---------HHHHHHHHHcCchhHHHHHHHHHHHHH
Confidence 9988877665554443 3332221110 0000 0 011246778899998888777777777
Q ss_pred HHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 012159 352 HYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVET 406 (470)
Q Consensus 352 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~ 406 (470)
.+....+.|.++++.+|+++.+.+.+.....++.++++++.|++.||+++|+...
T Consensus 222 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~ 276 (385)
T TIGR00710 222 FFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLR 276 (385)
T ss_pred HHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 7778888899998888999999999999999999999999999999999887554
No 27
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.97 E-value=7.7e-28 Score=240.99 Aligned_cols=282 Identities=20% Similarity=0.167 Sum_probs=206.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchh-hHH-----HHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHH
Q 012159 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSV-AGL-----VQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGV 186 (470)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~-~~~-----~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 186 (470)
++.+....++.++..++...++...|.+.++++.+... .++ +.++..++..++++++|+++||+|||+++.++.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 45667778889999999999999999999988643322 122 257778999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhHHH--------HHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhh
Q 012159 187 LIWSLATALLPLLAGFMP--------GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLL 258 (470)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~--------~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 258 (470)
++++++.+++++. +++. .++++|+++|++.|+.++...+++.|++|+++||++.++...+..+|..+|+.+
T Consensus 95 ~l~~i~~~~~a~~-~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~ 173 (490)
T PRK10642 95 VIMSISTFCIGLI-PSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGV 173 (490)
T ss_pred HHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999999888644 4433 488999999999999999999999999999999999999998888888888766
Q ss_pred HHhhh--------cccCchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHH
Q 012159 259 APPII--------ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWK 330 (470)
Q Consensus 259 ~~~l~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (470)
...+. ..+|||++|++.+++.++..++...++|+++........ ++. . .+...+.+..+++
T Consensus 174 ~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~-------~~~---~-~~~~~~~~~~~~~ 242 (490)
T PRK10642 174 VVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKL-------EQG---D-REGLQDGPKVSFK 242 (490)
T ss_pred HHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhh-------hhh---c-cccccccccCCHH
Confidence 55443 257999999997766555444444444433211000000 000 0 0000011233456
Q ss_pred HHhcC-HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 012159 331 AIFRS-KAVWA-MIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVET 406 (470)
Q Consensus 331 ~~~~~-~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~ 406 (470)
+++++ ++.+. .....++....++.+..++|.|+++.+|++....++......++.+++.++.|+++||+|||+.+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~ 320 (490)
T PRK10642 243 EIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVI 320 (490)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 66653 33332 223334455677788899999998888999888888888888999999999999999999987544
No 28
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.97 E-value=4.2e-28 Score=232.75 Aligned_cols=251 Identities=16% Similarity=0.087 Sum_probs=195.1
Q ss_pred HHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHH
Q 012159 125 ICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMP 204 (470)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (470)
.+...+..+++.+|.+.+++|++..+.|++.+.+.+++.+++++.|+++||+|||+++..+.+....+. +.....++++
T Consensus 2 ~~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~-~~~~~~~~~~ 80 (368)
T TIGR00903 2 ASQAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAA-GRLLDPFNYE 80 (368)
T ss_pred hhhHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHH-HHHHHhccHH
Confidence 345667788899999999999999999999999999999999999999999999987765554443333 3323335778
Q ss_pred HHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHH
Q 012159 205 GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFS 284 (470)
Q Consensus 205 ~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ 284 (470)
.+++.|++.|++.+. .+.....+++++|+++|++++++.+.+..+|.++++++++++.+++|||+.|++.+++.++..+
T Consensus 81 ~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~ 159 (368)
T TIGR00903 81 WLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGII 159 (368)
T ss_pred HHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH
Confidence 999999999999986 4566667799999999999999999999999999999999999999999999998888766544
Q ss_pred H-HHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012159 285 G-FKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYF 363 (470)
Q Consensus 285 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 363 (470)
. .+.++|+++.+.+ ..+ . + +. ..++++++++|.+|...+..++....++++..|+|.|+
T Consensus 160 ~~~~~lp~~p~~~~~----~~~---~-~------~~------~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L 219 (368)
T TIGR00903 160 LVLAALPALPFQAAE----GFG---F-K------DA------VKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAAL 219 (368)
T ss_pred HHHHHcCCCCCCCCC----Ccc---h-H------HH------HHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 4445544322110 000 0 0 00 01357899999999999999999999999999999999
Q ss_pred HHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 012159 364 SEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (470)
Q Consensus 364 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~ 402 (470)
++ .|++.. .+....+..+.+.++ .++++||..|+
T Consensus 220 ~~-~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~ 253 (368)
T TIGR00903 220 RP-AGLEDI-AGDAVALAILAGLIG---VAVIPDRVARA 253 (368)
T ss_pred HH-CCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhh
Confidence 76 588764 566655555555555 46777777654
No 29
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.97 E-value=3.4e-28 Score=240.40 Aligned_cols=288 Identities=16% Similarity=0.227 Sum_probs=215.9
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHH
Q 012159 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (470)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (470)
+++.+..+.+.+...+.....+....|.+.+ +|+++.+.+++.+++.++..++.++.|+++||+|||+++.++.++.++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~ 103 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAA 103 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHH
Confidence 3555566666677777777777777887776 599999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHh---hhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhc-ccC
Q 012159 192 ATALLPLL---AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-NLG 267 (470)
Q Consensus 192 ~~~~~~~~---~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~g 267 (470)
+.++++.. .++++.+++.|++.|++.+..++.....+.+++|+++|++++++++.+..+|..++|.+.+...+ ..+
T Consensus 104 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~ 183 (438)
T TIGR00712 104 VMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFND 183 (438)
T ss_pred HHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhh
Confidence 87665432 24556778899999999999999999999999999999999999999999999999888776444 568
Q ss_pred chHHHHHHHHHHHHHHHH-HHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHH
Q 012159 268 WESVFYIFGLLGIAWFSG-FKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHF 346 (470)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 346 (470)
||+.|++.+++.++..+. .++++++++....+..++.+ .+..+...+ ..+.+...+....+.+++++.+|...+..+
T Consensus 184 w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (438)
T TIGR00712 184 WHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYR-NDYPDDYNE-KAEQELTAKEIFMQYVLPNKLLWYIAIANV 261 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcc-ccccccccc-ccccccchHHHHHHHHccCchHHHHHHHHH
Confidence 999999988887665443 44444433221100000000 000000000 000000000011134788999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 012159 347 CGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (470)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~ 402 (470)
+.....++...++|.|+++..|+++.+++++..+..++.++++++.|++.||++++
T Consensus 262 ~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~ 317 (438)
T TIGR00712 262 FVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKG 317 (438)
T ss_pred HHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 87788888889999999988899999999999999999999999999999999644
No 30
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.97 E-value=2e-27 Score=232.34 Aligned_cols=317 Identities=14% Similarity=0.108 Sum_probs=237.1
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHH
Q 012159 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (470)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (470)
+.+....++.++..........+++.+.+++|.+..+.|++.+.+.++..++.+++|++.||+|||+++..+.++.+++.
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~ 92 (402)
T TIGR00897 13 LNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGH 92 (402)
T ss_pred chhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 34444555555555555555566777778899999999999999999999999999999999999999999998888776
Q ss_pred HHHHH---hhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHH-HHHHhhHHhhhcccCch
Q 012159 194 ALLPL---LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGS-VAGLLLAPPIIENLGWE 269 (470)
Q Consensus 194 ~~~~~---~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~~~~~l~~~~g~~ 269 (470)
+++.. ..++++.+++.|++.|++.+...+...+.+.+++|+++|++++|+.+.+.++|. .++|++++.+.+..||+
T Consensus 93 ~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~ 172 (402)
T TIGR00897 93 AAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEM 172 (402)
T ss_pred HHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchH
Confidence 54421 234667888999999999888878888889999999999999999999999996 68999999999888977
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHH
Q 012159 270 SVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGS 349 (470)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 349 (470)
..+|......++..+..+++.+++++.+.. +++++ . ++ ....++.++++|.+|...+..++..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (402)
T TIGR00897 173 NTLWSALAFVLTGGVIALFSNKDIFTPQHM-QTREK-------F----SE-----LGKAATILFTNPNVLLGGMVRIINT 235 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCcccc-cCCcc-------h----hh-----HHHHHHHHHcChhHHHHHHHHHHHH
Confidence 666655444333333333332222111110 00000 0 00 0012457889999998888888888
Q ss_pred HHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch----------------------
Q 012159 350 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT---------------------- 407 (470)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~---------------------- 407 (470)
...+....+.|.|+++ +|++..+.+.+.....++..++.++.|+++||+++|+....
T Consensus 236 ~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~ 314 (402)
T TIGR00897 236 IGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGH 314 (402)
T ss_pred HHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 8888889999999875 79999999999899999999999999999999998765421
Q ss_pred -------------------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHHHHHH
Q 012159 408 -------------------------------------MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYL 449 (470)
Q Consensus 408 -------------------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~ 449 (470)
.|+.+....++..++|.+.|.+.+..+.. ..+++.+++.++
T Consensus 315 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~-~~~~~~a~~~~i 392 (402)
T TIGR00897 315 SFAVALIIAIALGIFLAGYVPLAAVFPTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAI-GVVWIFAALYVV 392 (402)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH-HHHHHHHHHHHH
Confidence 77788888888888999888888876633 333443333333
No 31
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.97 E-value=5.7e-28 Score=239.36 Aligned_cols=334 Identities=15% Similarity=0.177 Sum_probs=247.5
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHH
Q 012159 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (470)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (470)
+|.++..+++..+........++..+|.+.+++|.+..+.+++.+.+.++..++.+++|+++||+|||++++.+.++.++
T Consensus 17 ~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~ 96 (455)
T TIGR00892 17 GWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASL 96 (455)
T ss_pred chHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHH
Confidence 46666666666665556666678889999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHhhhHHHHHHH-HHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchH
Q 012159 192 ATALLPLLAGFMPGLVL-SRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWES 270 (470)
Q Consensus 192 ~~~~~~~~~~~~~~l~~-~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~ 270 (470)
+.++++ ..++++.+++ .|++.|++.+...+...+++.++++ ++|++++++.+.+..+|..++|++++.+.+.+|||+
T Consensus 97 ~~~~~~-~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~ 174 (455)
T TIGR00892 97 GMILAS-FSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRG 174 (455)
T ss_pred HHHHHH-HhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHH
Confidence 887765 4455566654 5689999998777777888889996 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhh-hH-HhhhccCCCCCHHHHhcCHHHHHHHHHHHHH
Q 012159 271 VFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSA-SL-EEMGESLKDVPWKAIFRSKAVWAMIYAHFCG 348 (470)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 348 (470)
+|++.+++.++..+..+++.+.++..+....+.++.........+ .. ...++..+... .+++++|.++...+..++.
T Consensus 175 ~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~ 253 (455)
T TIGR00892 175 SFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLD-FSLFTHRGFLVYLSGNVIM 253 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcc-hHHhcCchHHHHHHHHHHH
Confidence 999999887665554444433221110000000000000000000 00 00000001111 2578899999888888888
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH--HhcCCcch-------------------
Q 012159 349 SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL--IATGVETT------------------- 407 (470)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--~~~~~~~~------------------- 407 (470)
.++.+....++|.|+++ .|++..+++++.++.+++.++++++.|++.||. ++++....
T Consensus 254 ~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~ 332 (455)
T TIGR00892 254 FLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGD 332 (455)
T ss_pred HHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhch
Confidence 88888888899999976 699999999999999999999999999999973 22221111
Q ss_pred --------------------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHHHHHH
Q 012159 408 --------------------------------------MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYL 449 (470)
Q Consensus 408 --------------------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~ 449 (470)
.|+++....++.++||.++|++.+..+.+...+.+.++..++
T Consensus 333 ~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li 412 (455)
T TIGR00892 333 YTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVS 412 (455)
T ss_pred HHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHH
Confidence 788899999999999999999999876676666655544433
No 32
>PRK10504 putative transporter; Provisional
Probab=99.97 E-value=4.6e-27 Score=234.99 Aligned_cols=318 Identities=20% Similarity=0.271 Sum_probs=250.4
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHH
Q 012159 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (470)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (470)
+.++.++++.++..++.+.+.+.+|.+.+++|.+..+.+++.+.+.++..++.+++|+++||+|||++++.+.++++++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~ 89 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGS 89 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 44566777888888888899999999999999999999999999999999999999999999999999999988888887
Q ss_pred HHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHH
Q 012159 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFY 273 (470)
Q Consensus 194 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~ 273 (470)
+++. ..++++.+++.|+++|++.+...+...+++.+++|+++|++++++.....++|..+||.+++.+.++.|||+.|+
T Consensus 90 ~~~~-~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~ 168 (471)
T PRK10504 90 LFCA-LSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFL 168 (471)
T ss_pred HHHH-HhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHH
Confidence 7664 456678899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCCCCccchh-------------hhhh--hhh-----------------hhHHhhh
Q 012159 274 IFGLLGIAWFSGFKILQEGETSNGATLAPRSNYI-------------NMKK--SLS-----------------ASLEEMG 321 (470)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~--~~~-----------------~~~~~~~ 321 (470)
+...+.++..+......++.+....+. +..... ...+ ... ...++..
T Consensus 169 ~~~~~~~l~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (471)
T PRK10504 169 INIPVGIIGAIATLMLMPNYTMQTRRF-DLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARN 247 (471)
T ss_pred HHHHHHHHHHHHHHHhCCCccccCCCC-ChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 988776655544444333222111110 000000 0000 000 0001111
Q ss_pred ccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 012159 322 ESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIA 401 (470)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~ 401 (470)
...+..+ .++++||.++...+..++..........+.|.|++..+|.++...+++.....++.+++..+.+++.||+++
T Consensus 248 ~~~~~~~-~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~ 326 (471)
T PRK10504 248 NNRALFS-LKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGY 326 (471)
T ss_pred CCCCccC-HHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 1112223 358899999998888888888877777889999988789999999999999999999999999999999998
Q ss_pred cCCcch----------------------------------------------------------HHHHHHhhhhHHHHHH
Q 012159 402 TGVETT----------------------------------------------------------MGITNTVGAVPGIVGV 423 (470)
Q Consensus 402 ~~~~~~----------------------------------------------------------~g~~~~~~~~~~~ig~ 423 (470)
|+.... .+..+....++..+|+
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~ 406 (471)
T PRK10504 327 RRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGV 406 (471)
T ss_pred hHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHH
Confidence 876653 6777777888889999
Q ss_pred HHHHHhhccCC
Q 012159 424 ALTGYLLDSTH 434 (470)
Q Consensus 424 ~~~g~l~~~~~ 434 (470)
.+.|.+.+..+
T Consensus 407 ~i~g~ll~~~g 417 (471)
T PRK10504 407 TIAGLLLGLFG 417 (471)
T ss_pred HHHHHHHHHhh
Confidence 99988877654
No 33
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.97 E-value=4e-27 Score=229.77 Aligned_cols=271 Identities=18% Similarity=0.173 Sum_probs=218.6
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHH
Q 012159 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (470)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (470)
|.+....+..+........+.+.+|.+.+++|.+..+.++..+++.++..+++++.|+++||+|||++++.+.++.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~ 82 (392)
T PRK10473 3 RFLLCSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIAS 82 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHH
Confidence 34455556666666777777888999999999999999999999999999999999999999999999999998888888
Q ss_pred HHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHH
Q 012159 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFY 273 (470)
Q Consensus 194 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~ 273 (470)
+++. ..++.+.+++.|++.|++.+...+...+++.+++++++|++++++.+....+|..++|.+++.+.+..||++.|+
T Consensus 83 ~~~~-~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~ 161 (392)
T PRK10473 83 LLCS-LAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFY 161 (392)
T ss_pred HHHH-HhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHH
Confidence 7764 456668888999999999999899999999999999999999999999999999999999999888889999999
Q ss_pred HHHHHHHHHHHHH-HhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHH
Q 012159 274 IFGLLGIAWFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGH 352 (470)
Q Consensus 274 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 352 (470)
+.+++.++..+.. +.++|+++.+ ++ ++.. .....++.++++.++...+...+.....
T Consensus 162 ~~~~~~~i~~~~~~~~~~~~~~~~-~~--~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (392)
T PRK10473 162 TMAAMGILVLLLSLFILKETRPAR-AP--AASS-------------------KPRENSESLLNRFFLSRLVITTLSVTVI 219 (392)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCcc-cC--Cccc-------------------hHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 9888776655443 3444432221 10 0000 0011245678888777666655555555
Q ss_pred HHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch
Q 012159 353 YTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT 407 (470)
Q Consensus 353 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~ 407 (470)
.....+.|.++++.+|+++.+.+.+.....++.+++.++.+++.||+++|+....
T Consensus 220 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~ 274 (392)
T PRK10473 220 LTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLT 274 (392)
T ss_pred HHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 5666777888888889999999999999999999999999999999999876554
No 34
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.96 E-value=2.6e-28 Score=236.82 Aligned_cols=279 Identities=19% Similarity=0.237 Sum_probs=220.9
Q ss_pred HHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhh
Q 012159 122 AFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAG 201 (470)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 201 (470)
.++..+.+...++...|.+.+++|.+..+.+++.+++.++..++.++.|+++||+|||+++.++.++.+++.+++. ..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~-~~~ 81 (379)
T TIGR00881 3 GYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFG-FST 81 (379)
T ss_pred hhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHH-Hhh
Confidence 4567778888899999999999999999999999999999999999999999999999999999999888887775 456
Q ss_pred HHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHH-hhHHhhhcccCchHHHHHHHHHHH
Q 012159 202 FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGL-LLAPPIIENLGWESVFYIFGLLGI 280 (470)
Q Consensus 202 ~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~-~~~~~l~~~~g~~~~~~~~~~~~~ 280 (470)
+++.+++.|++.|++.+...+...+++.+++|+++|++++++.+.+..+|..++| .+++.+.+..+|++.|++.+++.+
T Consensus 82 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (379)
T TIGR00881 82 SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAI 161 (379)
T ss_pred hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHH
Confidence 7789999999999999999999999999999999999999999999999999999 577777778899999999888776
Q ss_pred HHHHHHHh-hccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Q 012159 281 AWFSGFKI-LQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWL 359 (470)
Q Consensus 281 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 359 (470)
+..+..+. .+++++.......+++.....+. .....+.+.......++.++++|.+|...+..++..........+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (379)
T TIGR00881 162 IVSLICFLLLRDSPQSCGLPPAEEMPNEEPDG--DAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWS 239 (379)
T ss_pred HHHHHHheeeCCCccccccCccccCccccccc--ccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 65444443 33332221111110000000000 0000000001112234677889999999888888888888899999
Q ss_pred HHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 012159 360 PTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (470)
Q Consensus 360 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~ 403 (470)
|.|+++.+|+++.+.+.+.....++.++++++.+++.||..+++
T Consensus 240 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~ 283 (379)
T TIGR00881 240 PLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGR 283 (379)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCc
Confidence 99999889999999999999999999999999999999875443
No 35
>PRK10133 L-fucose transporter; Provisional
Probab=99.96 E-value=5.5e-27 Score=230.68 Aligned_cols=276 Identities=16% Similarity=0.177 Sum_probs=213.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHH
Q 012159 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (470)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (470)
...+..+++.++...+.........|.+.+++|++..+.|++.+.+.+++.+++++.|+++||+|||+++.++.++++++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~ 104 (438)
T PRK10133 25 IIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALG 104 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 34556666777787888888899999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHH--HhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhc-c----
Q 012159 193 TALLP--LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-N---- 265 (470)
Q Consensus 193 ~~~~~--~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~---- 265 (470)
.+++. ..+++++.+++.|+++|++.+...+..+.++.++.++++|...+++.+....+|..+||.+++.+.. .
T Consensus 105 ~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~ 184 (438)
T PRK10133 105 AALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQ 184 (438)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 87652 3466778999999999999999999999999998777777778999999999999999998876541 0
Q ss_pred ---------------------cCchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccC
Q 012159 266 ---------------------LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESL 324 (470)
Q Consensus 266 ---------------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (470)
.+||++|+....+..+..++....+.++.+.++. .+ ++ ...
T Consensus 185 ~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~-~~-~~----------------~~~ 246 (438)
T PRK10133 185 SQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNH-SD-AK----------------QGS 246 (438)
T ss_pred chhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc-cc-cc----------------ccc
Confidence 2456666544433322222222222111110000 00 00 000
Q ss_pred CCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 012159 325 KDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYF-SEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (470)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~ 403 (470)
....+++++++|.++...+..++..........|.+.|+ ++.+|+++.++++......++.++++++.+++.||+++|+
T Consensus 247 ~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~ 326 (438)
T PRK10133 247 FSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHK 326 (438)
T ss_pred hhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH
Confidence 012346788999988887777888888888888899885 5678999999999999999999999999999999999886
Q ss_pred Ccc
Q 012159 404 VET 406 (470)
Q Consensus 404 ~~~ 406 (470)
...
T Consensus 327 ~l~ 329 (438)
T PRK10133 327 VLA 329 (438)
T ss_pred HHH
Confidence 644
No 36
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.96 E-value=1.4e-27 Score=230.51 Aligned_cols=273 Identities=15% Similarity=0.088 Sum_probs=221.3
Q ss_pred HHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHH
Q 012159 119 TSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL 198 (470)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 198 (470)
+..+.++..+......+.+|.+..+++.+..+.+++.+++.++..++++++|+++||+|||+++..+.++.+++.++...
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 83 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPF 83 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHH
Confidence 44566777777888888899999999999999999999999999999999999999999999999998887777766644
Q ss_pred hh----hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHH
Q 012159 199 LA----GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYI 274 (470)
Q Consensus 199 ~~----~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~ 274 (470)
.. .+++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++||++++.+.+..|||+.|++
T Consensus 84 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~ 163 (365)
T TIGR00900 84 VALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWV 163 (365)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 33 16788999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHH
Q 012159 275 FGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYT 354 (470)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 354 (470)
.++..++..+..+.++.+++++++....+++ ...+ ....++.++++|.++...+..++.......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (365)
T TIGR00900 164 DAVGFAISALLIVSVRIPELAASEIQALSNA----------VLRD-----TREGIKFVLKNPLLRTLLLLALLFNLVFAP 228 (365)
T ss_pred HHHHHHHHHHHHHhcccccCCCccccccchh----------HHHH-----HHhHHHHHHcCcHHHHHHHHHHHHHHHHHH
Confidence 8877665555444443322211111000000 0000 011356778899998888888777777766
Q ss_pred HH-HHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 012159 355 CL-SWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVET 406 (470)
Q Consensus 355 ~~-~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~ 406 (470)
.. .+.|.|.++.+|.++.+.+.+.....++.+++.++.+++.||+++++...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 281 (365)
T TIGR00900 229 AIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMT 281 (365)
T ss_pred HHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHH
Confidence 66 78899998878999999999999999999999999999999999886544
No 37
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.96 E-value=7.4e-27 Score=226.84 Aligned_cols=305 Identities=14% Similarity=0.091 Sum_probs=235.0
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHH
Q 012159 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (470)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (470)
+.+..++++.++.........+.+|.+.+++|.+..++|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~ 85 (381)
T PRK03633 6 RPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGC 85 (381)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667777888888889999999999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHH
Q 012159 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFY 273 (470)
Q Consensus 194 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~ 273 (470)
.+++ ..++++.+++.|++.|++.+...+...+.+.+..++++|++++++++.+.++|..+||.+++.+.+...+.. .+
T Consensus 86 ~~~~-~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~-~~ 163 (381)
T PRK03633 86 AGLG-LMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVL-PW 163 (381)
T ss_pred HHHH-HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchH-HH
Confidence 7765 466778999999999999999888888888899988999999999999999999999999999877543333 33
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHH
Q 012159 274 IFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHY 353 (470)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 353 (470)
..+.+....... ++.+.+++.. ++ + +..+.++.+++|.++......+.....+.
T Consensus 164 ~~~~~~~~~~~~-~~~~~~~~~~-~~----~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (381)
T PRK03633 164 VTGLVLAAILPL-LFTRILNQQA-EN----H--------------------DSTSIWPMLKLRQARLGVNGCIISGIVLG 217 (381)
T ss_pred HHHHHHHHHHHH-HHhcccCCCC-CC----C--------------------CCCCHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 323222221111 1211111110 00 0 01134567788877765555555555566
Q ss_pred HHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch--------------------------
Q 012159 354 TCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT-------------------------- 407 (470)
Q Consensus 354 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~-------------------------- 407 (470)
....++|.|+++ .|.++...+.+.+...++.+++++..|++.||+++|+....
T Consensus 218 ~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g 296 (381)
T PRK03633 218 SLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAMLSQAAMAPALFILG 296 (381)
T ss_pred HHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 677789999986 59999999999999999999999999999999999876542
Q ss_pred --------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHHHHH
Q 012159 408 --------------------------MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFY 448 (470)
Q Consensus 408 --------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~ 448 (470)
.+..+....+|.++||.+.|++.|..+ +...+.+.+.+.+
T Consensus 297 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g-~~~~f~~~~~~~l 362 (381)
T PRK03633 297 AAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYS-DNLLFIMIASVSF 362 (381)
T ss_pred HHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHH
Confidence 344455678899999999999999876 4444444444333
No 38
>PRK15075 citrate-proton symporter; Provisional
Probab=99.96 E-value=7.8e-27 Score=230.44 Aligned_cols=273 Identities=14% Similarity=0.118 Sum_probs=201.5
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHH-HHH-----HHHHHHhhhhhHHHhhhhcCcHHHHHH
Q 012159 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQ-SSF-----FWGYALSQLPGGWLAKIFGGRKVLQTG 185 (470)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~-~~~-----~~~~~~~~~~~g~l~dr~g~r~~~~~~ 185 (470)
|++....++++.++.+++...++...|.+.++++.+..+.+.+. +.. .+...+++++.|+++||+|||++++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 45678888999999999999999999999999998887765433 222 222246789999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhHHH--------HHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHh
Q 012159 186 VLIWSLATALLPLLAGFMP--------GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLL 257 (470)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~--------~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 257 (470)
.++++++.+++++ .++++ .+++.|+++|++.+...+....+++|++|+++|++++++...+..+|..+++.
T Consensus 93 ~~~~~~~~~l~~~-~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~ 171 (434)
T PRK15075 93 LSIMASGTLLIAF-VPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAAL 171 (434)
T ss_pred HHHHHHHHHHHHh-CCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHH
Confidence 9999999888864 44434 46899999999999999999999999999999999999999988888888888
Q ss_pred hHHhhh--------cccCchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCH
Q 012159 258 LAPPII--------ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPW 329 (470)
Q Consensus 258 ~~~~l~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (470)
+++.+. +.+|||++|++..+...+. ++.++..++.++ .... + .+......+
T Consensus 172 ~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~----~~~~~~~~e~~~-------~~~~-~---------~~~~~~~~~ 230 (434)
T PRK15075 172 LGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFI----FLIRRSLEETEE-------FLAR-K---------HRPSMREIF 230 (434)
T ss_pred HHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH----HHHHHhcCCCHH-------HHHh-h---------hccccccHH
Confidence 777653 4679999998754332211 122211111000 0000 0 000001113
Q ss_pred HHHhcCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 012159 330 KAIFRSKAVWAM-IYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVET 406 (470)
Q Consensus 330 ~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~ 406 (470)
+...++++.+.. .+..++.....+.+..+.|.|+++.+|++..+.+++..+..++.+++.++.|+++||+++|+...
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~ 308 (434)
T PRK15075 231 RSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLI 308 (434)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHH
Confidence 344555555544 33344455566778889999999888999999998888999999999999999999999887543
No 39
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1e-28 Score=240.53 Aligned_cols=286 Identities=19% Similarity=0.290 Sum_probs=234.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHh-HHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHH
Q 012159 113 YKLIGTTSLAFVICNMDKVNLSVA-IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (470)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (470)
..++..++..++....+...++.. +..+.+|.+....+.+.+.+++.++++++++++|.+.||++..+.+....+++++
T Consensus 44 l~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~ 123 (495)
T KOG2533|consen 44 LFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGL 123 (495)
T ss_pred HHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHH
Confidence 345556666777777776666555 4447799999999999999999999999999999999999988888888888887
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhh------cc
Q 012159 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII------EN 265 (470)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~------~~ 265 (470)
..++.+. ..+++.+++.|++.|+.++..+|....+++.|+.+++|+..+|++.+..++|+++|++++..+. ..
T Consensus 124 ~~~~~~~-~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~ 202 (495)
T KOG2533|consen 124 FGFLTAA-VHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGL 202 (495)
T ss_pred HHHHHHH-HhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCc
Confidence 7766654 6777999999999999999999999999999999999999999999999999999999998863 35
Q ss_pred cCchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHH
Q 012159 266 LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAH 345 (470)
Q Consensus 266 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 345 (470)
.||||.|++.|++.++..++.++..++.+.+..-..++++....++......+...++.+...+++.+++|.+|.+.+..
T Consensus 203 ~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~ 282 (495)
T KOG2533|consen 203 AGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCY 282 (495)
T ss_pred CCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHH
Confidence 68999999999998887766655555555444333333332222222212222222225667788999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012159 346 FCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL 399 (470)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 399 (470)
++.....+++.+|+|.|+++..|++..++..+.....++++++.+++|.++||.
T Consensus 283 ~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~ 336 (495)
T KOG2533|consen 283 FFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRL 336 (495)
T ss_pred HHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHH
Confidence 999999999999999999986679999999999999999999999999999994
No 40
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.96 E-value=2.9e-27 Score=237.55 Aligned_cols=287 Identities=22% Similarity=0.232 Sum_probs=231.4
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHH
Q 012159 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (470)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (470)
+.+..++++.++..++.....+.+|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||+++.++.++++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 2 LLTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGS 81 (485)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 34566777888888999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHH
Q 012159 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFY 273 (470)
Q Consensus 194 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~ 273 (470)
++++ ..++++.+++.|+++|++.+...+...+++.|++|+++|+++++++..+..+|..+||.+++++.++.|||+.|+
T Consensus 82 ~~~~-~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~ 160 (485)
T TIGR00711 82 LLCG-VAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFL 160 (485)
T ss_pred HHHh-CcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhh
Confidence 7775 556778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-hccCCCCCCCCCCCccch---------------hhhhhhhhhh------------------HHh
Q 012159 274 IFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNY---------------INMKKSLSAS------------------LEE 319 (470)
Q Consensus 274 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~------------------~~~ 319 (470)
+.+.+.++..+..++ .+++++.. .+..+.... ........+. ..+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (485)
T TIGR00711 161 INVPIGIIVVVVAFFILPRDKPAA-SENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWE 239 (485)
T ss_pred hhhHHHHHHHHHHHHHcCCccccc-cCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 988777655544433 33322211 111110000 0000000000 011
Q ss_pred hhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012159 320 MGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL 399 (470)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 399 (470)
..++.+..+ .+.+++|.++...+..++..+..+....++|.|+++.+|+++.+++++.....++.+++.++.|++.||+
T Consensus 240 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~ 318 (485)
T TIGR00711 240 LTDDNPLVD-LRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI 318 (485)
T ss_pred HcCCCCccC-HHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 111111122 4678899999888888888888888899999999998999999999999999999999999999999999
Q ss_pred HhcC
Q 012159 400 IATG 403 (470)
Q Consensus 400 ~~~~ 403 (470)
++|+
T Consensus 319 ~~~~ 322 (485)
T TIGR00711 319 DPRK 322 (485)
T ss_pred CcHH
Confidence 9886
No 41
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.96 E-value=5.6e-27 Score=229.48 Aligned_cols=262 Identities=17% Similarity=0.208 Sum_probs=214.4
Q ss_pred HHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHH
Q 012159 117 GTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (470)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 196 (470)
..+.+..+...+....+.+.+|.+.+++|.+..+.++..+++.+++.++++++|+++||+|||++++.+.++++++.+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~ 98 (413)
T PRK15403 19 MALILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAAT 98 (413)
T ss_pred HHHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHH
Confidence 33444555666777888888999999999999999999999999999999999999999999999999999998888777
Q ss_pred HHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHH
Q 012159 197 PLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFG 276 (470)
Q Consensus 197 ~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~ 276 (470)
. ..++++.++++|+++|++.+...+...+++.|+++++++++++++......+|..+||++++.+.++.|||+.|++.+
T Consensus 99 ~-~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~ 177 (413)
T PRK15403 99 L-FTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIA 177 (413)
T ss_pred H-HcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 4 567778999999999999887677778889999999999999999999999999999999999998899999999998
Q ss_pred HHHHHHHHHH-HhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHH
Q 012159 277 LLGIAWFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTC 355 (470)
Q Consensus 277 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 355 (470)
++.++..+.. +.++++++.+++. ... + . ....++++++||.+|...+..++.....+..
T Consensus 178 ~~~~i~~~~~~~~lp~~~~~~~~~----~~~----~---~---------~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~ 237 (413)
T PRK15403 178 VMGLIAFVGLLLAMPETVKRGAVP----FSA----K---S---------VLRDFRNVFRNRLFLTGAATLSLSYIPMMSW 237 (413)
T ss_pred HHHHHHHHHHHHhCCCCccccCCC----CCh----H---H---------HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 8876665543 3455433211100 000 0 0 0113468899999999888888888888888
Q ss_pred HHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012159 356 LSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL 399 (470)
Q Consensus 356 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 399 (470)
..+.|.++++.+|+++.+.++......++.+++..+.+++.++.
T Consensus 238 ~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~ 281 (413)
T PRK15403 238 VAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP 281 (413)
T ss_pred HHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 88899999998899999999988888888888888887766443
No 42
>PRK09952 shikimate transporter; Provisional
Probab=99.96 E-value=1.8e-26 Score=227.73 Aligned_cols=277 Identities=18% Similarity=0.136 Sum_probs=201.1
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHhHHh-hhhhc--CCCchhhHHHH-----HHHHHHHHHhhhhhHHHhhhhcCcHHH
Q 012159 111 QRYKLIGTTSLAFVICNMDKVNLSVAIIP-MSHRF--GWNSSVAGLVQ-----SSFFWGYALSQLPGGWLAKIFGGRKVL 182 (470)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--g~s~~~~~~~~-----~~~~~~~~~~~~~~g~l~dr~g~r~~~ 182 (470)
++++.+...+++.++.+++...++...|. +.+++ +.++. .+++. ++..++..+++++.|+++||+|||+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 34567778888899999999998888775 55555 66666 45543 345566778899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhHHH--------HHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHH
Q 012159 183 QTGVLIWSLATALLPLLAGFMP--------GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVA 254 (470)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~--------~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 254 (470)
.++.++++++.+++++ .+++. .++++|+++|++.|..++....++.|++|+++|++..+..+.+..+|..+
T Consensus 98 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l 176 (438)
T PRK09952 98 MLTVWMMGIATALIGL-LPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLL 176 (438)
T ss_pred HHHHHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 9999999999888764 44433 58889999999999999999999999999999999999999999999999
Q ss_pred HHhhHHhhh--------cccCchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCC
Q 012159 255 GLLLAPPII--------ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKD 326 (470)
Q Consensus 255 g~~~~~~l~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (470)
++.+...+. +.+|||+.|++.+++.++........+|+++..+.. .+ .++ .+.+.
T Consensus 177 ~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~----~~-----------~~~--~~~~~ 239 (438)
T PRK09952 177 STGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQ----HE-----------QAA--AKKRI 239 (438)
T ss_pred HHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHH----hh-----------ccc--ccccC
Confidence 887776654 357999999988776544332222222221110000 00 000 00001
Q ss_pred CCHHHHhcCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 012159 327 VPWKAIFRSKAVWAMIY-AHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVE 405 (470)
Q Consensus 327 ~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~ 405 (470)
...+.++++|+.|...+ ..++..+..+....+.|.|+++.+|++......+....++...++.++.|+++||+++|+..
T Consensus 240 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~ 319 (438)
T PRK09952 240 PVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVY 319 (438)
T ss_pred CHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH
Confidence 11234667777766544 44555666777888999999888899887666566667778888999999999999998644
Q ss_pred c
Q 012159 406 T 406 (470)
Q Consensus 406 ~ 406 (470)
.
T Consensus 320 ~ 320 (438)
T PRK09952 320 I 320 (438)
T ss_pred H
Confidence 3
No 43
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.96 E-value=1.4e-26 Score=224.59 Aligned_cols=302 Identities=13% Similarity=0.027 Sum_probs=229.2
Q ss_pred HHHHHHHhhhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHH-HHHHHHHHHHHHHH
Q 012159 121 LAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQT-GVLIWSLATALLPL 198 (470)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~-~~~~~~~~~~~~~~ 198 (470)
+.+++..+......+.+|. +.+++|.+..+.|++.+++.+...+.+++.|+++||+|||+.+++ +.++..++.+++ .
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~-~ 82 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLF-A 82 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHH-H
Confidence 4466677777788888886 568899999999999999999999999999999999999887665 444444454454 3
Q ss_pred hhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhH--HHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHH
Q 012159 199 LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRA--VSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFG 276 (470)
Q Consensus 199 ~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~ 276 (470)
..++++.+++.|++.|.+.+...|...++..++.++++|++. .+....+.++|.++||++++.+.+..|||+.|++.+
T Consensus 83 ~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~ 162 (375)
T TIGR00899 83 WNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAA 162 (375)
T ss_pred hcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHH
Confidence 556778888889999888888888888888998887777654 678888889999999999999999999999999998
Q ss_pred HHHHHHHHHHHh-hccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHH
Q 012159 277 LLGIAWFSGFKI-LQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTC 355 (470)
Q Consensus 277 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 355 (470)
++.++..+..++ +++.++...++ . + ..+.+..++++.++...+..++........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~-~---~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (375)
T TIGR00899 163 LAFVLCGVLVWLFLPSYPRGAPGA-L---T--------------------RLEVRGLLASRDTRLLFVACTLMWGCNILY 218 (375)
T ss_pred HHHHHHHHHHHHhCCCcccCcccc-c---C--------------------cchhhhhhcCcchHHHHHHHHHHHHHHHHH
Confidence 877665554443 55433211100 0 0 011234566777776666666555555666
Q ss_pred HHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch----------------------------
Q 012159 356 LSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT---------------------------- 407 (470)
Q Consensus 356 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~---------------------------- 407 (470)
..++|.|+++.+|.++.+.+.+.....+...++.++.|++.||+++|+....
T Consensus 219 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (375)
T TIGR00899 219 IINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLN 298 (375)
T ss_pred HhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788999988889999999988888878888899999999999999876554
Q ss_pred --------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHHHHH
Q 012159 408 --------------------------MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFY 448 (470)
Q Consensus 408 --------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~ 448 (470)
.+..+....++..++|.+.|.+.+..+ +...+.+.+++.+
T Consensus 299 g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g-~~~~~~~~~~~~~ 364 (375)
T TIGR00899 299 AIFIGILAGIGMLYFQDLMPGRAGAATTLYTNTGRVGWIIAGSVGGILAERWS-YHAVYWFAIVMLI 364 (375)
T ss_pred HHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-chhHHHHHHHHHH
Confidence 677777888899999999999888765 4444444444333
No 44
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.96 E-value=1.6e-26 Score=226.05 Aligned_cols=309 Identities=17% Similarity=0.149 Sum_probs=229.4
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHH
Q 012159 114 KLIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (470)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (470)
+.+..+++..++..+......+.+|. +.+++|.+..+.|++.+++.+++.+++++.|+++||+|||++++.+.++++++
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 94 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALS 94 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHH
Confidence 55566777788888888888888887 67889999999999999999999999999999999999999999998887776
Q ss_pred HHHHHHh--h-----hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcc
Q 012159 193 TALLPLL--A-----GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN 265 (470)
Q Consensus 193 ~~~~~~~--~-----~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 265 (470)
.+++... . .+++.+++.|++.|++.+...+...+++.+++|+++|++++++...+..+|.++||.+++.+.++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~ 174 (399)
T PRK05122 95 GLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHW 174 (399)
T ss_pred HHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHc
Confidence 5544322 1 24567899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHH
Q 012159 266 LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAH 345 (470)
Q Consensus 266 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 345 (470)
+||++.+++.+++.++..+... +.++.... ++++ .++++.++ .++......
T Consensus 175 ~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~---------------------~~~~~~~~--~~~~~~~~~ 225 (399)
T PRK05122 175 GGLAGLGLLIMLLALLGLLLAR---PRPAVPPV---KGER---------------------LPFRRVLG--RVWPYGMGL 225 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHHh---cCCCCCCC---Cccc---------------------hhHHHHHH--HHHHHHHHH
Confidence 9999988876665543332221 11111100 0000 01122222 223223333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch------------------
Q 012159 346 FCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT------------------ 407 (470)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~------------------ 407 (470)
.+..+.+.....++|.|+++ .|+ ...+.......++.++++++.|++.||+++|+....
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (399)
T PRK05122 226 ALASIGFGTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSP 302 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccH
Confidence 34455556677788888875 465 345666778888899999999999999998775543
Q ss_pred -------------------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHHHHHHH
Q 012159 408 -------------------------------------MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLT 450 (470)
Q Consensus 408 -------------------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 450 (470)
.++++....++..+++.+.|++.+..+ +...+.+.+++.++.
T Consensus 303 ~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~ 381 (399)
T PRK05122 303 WMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFG-YPSIFLAAALAALLG 381 (399)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHH
Confidence 777788888898999999999998765 555555555444444
Q ss_pred HHHHH
Q 012159 451 GTIVW 455 (470)
Q Consensus 451 ~~~~~ 455 (470)
....+
T Consensus 382 ~~~~~ 386 (399)
T PRK05122 382 LALTW 386 (399)
T ss_pred HHHHH
Confidence 33333
No 45
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.96 E-value=1.1e-26 Score=233.97 Aligned_cols=324 Identities=17% Similarity=0.204 Sum_probs=234.8
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHH
Q 012159 111 QRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS 190 (470)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 190 (470)
++|+.+..+++++++..++.....+.+|.+.+++|++..+.+++.+.+.++..++.++.|+++||+|||+++.++.++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 96 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFS 96 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 45677788888999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchH
Q 012159 191 LATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWES 270 (470)
Q Consensus 191 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~ 270 (470)
++.++++ ..++++.+++.|++.|++.+...+....++.+++++++|++++++...+..+|..++|.+++.+.++++||+
T Consensus 97 ~~~~~~~-~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~ 175 (496)
T PRK03893 97 VGTLACG-FAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRA 175 (496)
T ss_pred HHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHH
Confidence 8887775 456778999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhh---------------hccCCCCCHH-----
Q 012159 271 VFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEM---------------GESLKDVPWK----- 330 (470)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~----- 330 (470)
.|++.++..++.++.....+++++.......+.......+.......... ........+.
T Consensus 176 ~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (496)
T PRK03893 176 LFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLG 255 (496)
T ss_pred HHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHH
Confidence 99875444433333333333322111110000000000000000000000 0000000000
Q ss_pred ------------H-H-hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 012159 331 ------------A-I-FRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFA 396 (470)
Q Consensus 331 ------------~-~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~ 396 (470)
+ . .+.+......+..++..........++|.|+++.+|++..+.+++.+...++.+++.++.|++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~ 335 (496)
T PRK03893 256 LLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLG 335 (496)
T ss_pred HHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 0000011111111111111123557899999878899999999999999999999999999999
Q ss_pred HHHHhcCCcch---------------------------------------------------------HHHHHHhhhhHH
Q 012159 397 DNLIATGVETT---------------------------------------------------------MGITNTVGAVPG 419 (470)
Q Consensus 397 dr~~~~~~~~~---------------------------------------------------------~g~~~~~~~~~~ 419 (470)
||+++|+.... +++.+..+.++.
T Consensus 336 dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~ 415 (496)
T PRK03893 336 DWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGG 415 (496)
T ss_pred HHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHH
Confidence 99998876553 677778888899
Q ss_pred HHHHHHHHHhhccCCc
Q 012159 420 IVGVALTGYLLDSTHS 435 (470)
Q Consensus 420 ~ig~~~~g~l~~~~~~ 435 (470)
.+||++.|.+.+..+.
T Consensus 416 ~lgp~l~g~l~~~~g~ 431 (496)
T PRK03893 416 ALAPILGALIAQRLDL 431 (496)
T ss_pred HHHHHHHHHHhccCCh
Confidence 9999999999998763
No 46
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.96 E-value=2.2e-27 Score=233.42 Aligned_cols=321 Identities=14% Similarity=0.050 Sum_probs=244.2
Q ss_pred HHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHH
Q 012159 119 TSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL 198 (470)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 198 (470)
+++..++..+......+.+|.+.++++.++.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+..+.
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~ 101 (417)
T PRK10489 22 VFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLAL 101 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHH
Confidence 33345566666677788889988899999999999999999999999999999999999999999887777666554432
Q ss_pred ----hhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHH
Q 012159 199 ----LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYI 274 (470)
Q Consensus 199 ----~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~ 274 (470)
..++++.+++.|++.|++.+...+...+++.+++|+++|+++.++.....++|..+||.+++.+.+..+|++.|++
T Consensus 102 ~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~ 181 (417)
T PRK10489 102 NAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGL 181 (417)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHH
Confidence 1355678889999999998888888999999999999999999999999999999999999999998899999998
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHH
Q 012159 275 FGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYT 354 (470)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 354 (470)
.++..++..+..+.+++.+++++.+ ++.. ++. ...++..+++|.++...+..++... ...
T Consensus 182 ~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~----------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 241 (417)
T PRK10489 182 AAAGTFITLLPLLRLPALPPPPQPR----EHPL----------RSL-----LAGFRFLLASPVVGGIALLGGLLTM-ASA 241 (417)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCccc----ccch----------HHH-----HHHHHHHHcChHHHHHHHHHHHHHH-HHh
Confidence 8877766666655555433221100 0000 000 0124567788887766655554433 356
Q ss_pred HHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch---------------------------
Q 012159 355 CLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT--------------------------- 407 (470)
Q Consensus 355 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~--------------------------- 407 (470)
...++|.|+++.+|+++...+++.+...++.+++.++.+++.||.++++.+..
T Consensus 242 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (417)
T PRK10489 242 VRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLAL 321 (417)
T ss_pred HHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 77789999998789999999999999999999999999999998665544332
Q ss_pred ----------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHHHHHHHHHHHHhhcc
Q 012159 408 ----------------------------MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFA 459 (470)
Q Consensus 408 ----------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (470)
.++.+....++..+|+.+.|++.+..+... .+...+.+..+.+.+.+....
T Consensus 322 ~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~ 400 (417)
T PRK10489 322 FGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVA-SASASGFGLLIIGVLLLLVLG 400 (417)
T ss_pred HHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhh-HHHHHHHHHHHHHHHHHHhcc
Confidence 777888888999999999999999876544 334334444444444444444
Q ss_pred C
Q 012159 460 S 460 (470)
Q Consensus 460 ~ 460 (470)
+
T Consensus 401 ~ 401 (417)
T PRK10489 401 E 401 (417)
T ss_pred c
Confidence 4
No 47
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.96 E-value=1.8e-26 Score=225.08 Aligned_cols=308 Identities=16% Similarity=0.180 Sum_probs=240.4
Q ss_pred HHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHH
Q 012159 116 IGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATAL 195 (470)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 195 (470)
+..+++.++..++......+.+|.+++++|.+..+.|++.+.+.+++.+++++.|++.||+|||+++.++.++++++.++
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l 84 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFL 84 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 44666677777788888889999999999999999999999999999999999999999999999999999999988877
Q ss_pred HHHh--hhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcc--------
Q 012159 196 LPLL--AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-------- 265 (470)
Q Consensus 196 ~~~~--~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-------- 265 (470)
+... .++++.+++.|++.|+|.+...+..+.++.+..|+++|++.+++.+...++|..+||.+++.+...
T Consensus 85 ~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~ 164 (410)
T TIGR00885 85 FWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQD 164 (410)
T ss_pred HHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhh
Confidence 5322 356788999999999999999999999999999999999999999999999999999999887532
Q ss_pred ------------------cCchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCC
Q 012159 266 ------------------LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDV 327 (470)
Q Consensus 266 ------------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (470)
.+||++|++.+++.++..+...+.+.++.++ .+ +++ .....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~-~~---~~~-----------------~~~~~ 223 (410)
T TIGR00885 165 VLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNH-SD---AKQ-----------------ISFSA 223 (410)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-cc---ccc-----------------ccchh
Confidence 3699999998887766554443332221111 00 000 00011
Q ss_pred CHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 012159 328 PWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEEL-SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVET 406 (470)
Q Consensus 328 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~ 406 (470)
+.++++|+|+++...+..+++...+.+...+++.|.++.. +.+....+...+....+..+|+++++++.||+++|+.+.
T Consensus 224 ~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~ 303 (410)
T TIGR00885 224 SLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLM 303 (410)
T ss_pred hHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 3357789999999888888888888888999999997532 344444555666777888999999999999999987654
Q ss_pred h----------------------------------------------------HHHHHHhhhhHHHHHHHHHHHhhccC-
Q 012159 407 T----------------------------------------------------MGITNTVGAVPGIVGVALTGYLLDST- 433 (470)
Q Consensus 407 ~----------------------------------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~- 433 (470)
. .+.....+.+|++++|++.|++.|..
T Consensus 304 i~~~~~~~~~ll~~~~~~~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~~Gga~~p~l~G~~~d~~~ 383 (410)
T TIGR00885 304 AYAIIGMALCLGSIFAGGHVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAIIGGGIVPPLQGFIIDMKE 383 (410)
T ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHhccchHHHHHHHHHHHhc
Confidence 3 23334445589999999999999953
Q ss_pred ----CceehhhHHHH
Q 012159 434 ----HSWSMSLFAPS 444 (470)
Q Consensus 434 ----~~~~~~~~~~~ 444 (470)
+++...+++..
T Consensus 384 ~~~~~~~~~~~~~~~ 398 (410)
T TIGR00885 384 IAAAPAVNTSFILPL 398 (410)
T ss_pred ccccCccchHHHHHH
Confidence 34555555543
No 48
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.96 E-value=4e-26 Score=222.88 Aligned_cols=266 Identities=18% Similarity=0.211 Sum_probs=216.1
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHH
Q 012159 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (470)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (470)
.++.+....+..++..+....+.+.+|.+.+++|.++.+.+++.+++.++..++++++|+++||+|||+++.++.++.++
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~ 85 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFIL 85 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHH
Confidence 45666666666667777777888889999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHH
Q 012159 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (470)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~ 271 (470)
+.++.. ..++++.+++.|++.|++.+...+....+..|.++++++++++++.+.+..++..++|.+++.+.+..|||+.
T Consensus 86 ~~~~~~-~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~ 164 (394)
T PRK11652 86 GTLVAL-FAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRAC 164 (394)
T ss_pred HHHHHH-HHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHH
Confidence 877764 5566789999999999998888888888999999989999999999999999999999999999998999999
Q ss_pred HHHHHHHHHHHHHH-HHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHH
Q 012159 272 FYIFGLLGIAWFSG-FKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSW 350 (470)
Q Consensus 272 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 350 (470)
|++.+++.++..+. .+..+|+++.+++ +.+ ....++..+++|.++...+..+....
T Consensus 165 f~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (394)
T PRK11652 165 YLFLLLLGAGVTFSMARWMPETRPADAR----RTR-------------------VLASYRTLLSNRRFNCYLLMLIGTLA 221 (394)
T ss_pred HHHHHHHHHHHHHHHHHhCCccCccccc----hhH-------------------HHHHHHHHHcChHHHHHHHHHHHHHH
Confidence 99988776554433 3344443221100 000 01124667888888877666666666
Q ss_pred HHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 012159 351 GHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIA 401 (470)
Q Consensus 351 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~ 401 (470)
.......+.+.++++.+|+++.+.+++.....++.+++..+.+++.||+++
T Consensus 222 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~ 272 (394)
T PRK11652 222 GIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFST 272 (394)
T ss_pred HHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666667778889988889999999999888889999999999999999873
No 49
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.96 E-value=8.3e-27 Score=233.58 Aligned_cols=343 Identities=19% Similarity=0.219 Sum_probs=237.8
Q ss_pred HHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCC--------chhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHH
Q 012159 115 LIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWN--------SSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGV 186 (470)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s--------~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 186 (470)
....+.++.++..++...+....+.+..+++.+ ..+.+++.+++.++..++++++|+++||+|||++++++.
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~ 108 (481)
T TIGR00879 29 LSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIA 108 (481)
T ss_pred HHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHH
Confidence 333444455556677777888888888877777 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhh--HHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhH---Hh
Q 012159 187 LIWSLATALLPLLAG--FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA---PP 261 (470)
Q Consensus 187 ~~~~~~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~---~~ 261 (470)
++++++.++...... +++.+++.|++.|++.+...+...+++.|++|+++|++++++++.+..+|..++++++ +.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~ 188 (481)
T TIGR00879 109 LLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVS 188 (481)
T ss_pred HHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhc
Confidence 988888877644332 3458999999999999999999999999999999999999999999999999999999 77
Q ss_pred hhcccCchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCcc--chhhh-----------hh--hhhhhHHhhhccCCC
Q 012159 262 IIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRS--NYINM-----------KK--SLSASLEEMGESLKD 326 (470)
Q Consensus 262 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----------~~--~~~~~~~~~~~~~~~ 326 (470)
+.+..+||+.|++.++..++..+..++++++++....+...++ +.... .+ .......+.+.....
T Consensus 189 ~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (481)
T TIGR00879 189 LNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQ 268 (481)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhcc
Confidence 6677899999999777666666666666654321100000000 00000 00 000000000000111
Q ss_pred CCHHHHhc------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012159 327 VPWKAIFR------SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLI 400 (470)
Q Consensus 327 ~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~ 400 (470)
..++..++ .+.++...+..+...........+.|.+++ .+|++....+++.....++.+++.++.|++.||++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~ 347 (481)
T TIGR00879 269 PSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFE-NAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFG 347 (481)
T ss_pred ccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11333333 222333333333333334445666777765 57999988899999999999999999999999999
Q ss_pred hcCCcch------------------------------------------------------------------HHHHHHh
Q 012159 401 ATGVETT------------------------------------------------------------------MGITNTV 414 (470)
Q Consensus 401 ~~~~~~~------------------------------------------------------------------~g~~~~~ 414 (470)
+|+.... .+..+..
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 427 (481)
T TIGR00879 348 RRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAA 427 (481)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHH
Confidence 8764332 6677777
Q ss_pred hhhHHHHHHHHHHHhhccCCceehhhHHHHHHHHHHHHHHHhhcc
Q 012159 415 GAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFA 459 (470)
Q Consensus 415 ~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (470)
..++.++++.+.|.+.+..+ +...+.+.+++.++.....+....
T Consensus 428 ~~lg~~i~~~~~~~~~~~~~-~~~~f~~~~~~~~~~~i~~~~~~~ 471 (481)
T TIGR00879 428 NWLANFIVGFLFPTMLESIG-VGGVFIFFGGLNVLGLIFVYFFLP 471 (481)
T ss_pred HHHHHHHHHHHHHHHHHhcC-ccceehhHHHHHHHHHHHHheecc
Confidence 88888899999998887654 444444544444444444444333
No 50
>PRK11043 putative transporter; Provisional
Probab=99.96 E-value=4.3e-26 Score=223.21 Aligned_cols=263 Identities=14% Similarity=0.176 Sum_probs=214.5
Q ss_pred HHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHH
Q 012159 116 IGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATAL 195 (470)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 195 (470)
+..+.+..++..+....+.+.+|.+.+++|.++.+.+++.+++.++..++++++|+++||+|||+++..+.++.+++.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 87 (401)
T PRK11043 8 LVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLG 87 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHH
Confidence 33344445556667778888888899999999999999999999999999999999999999999999998888888776
Q ss_pred HHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHH
Q 012159 196 LPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIF 275 (470)
Q Consensus 196 ~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~ 275 (470)
.. ..++++.+++.|++.|++.+...+...+++.|+++++++++..+.......+|..++|.+++++.+++|||+.|++.
T Consensus 88 ~~-~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~ 166 (401)
T PRK11043 88 ML-WVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATL 166 (401)
T ss_pred HH-HhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHH
Confidence 64 55667889999999999988888888899999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHH
Q 012159 276 GLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTC 355 (470)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 355 (470)
+++.++..+..+.+++++++++ +++ +..++++.+++|.++...+...+........
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~-----~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (401)
T PRK11043 167 FAITLLLILPTLRLKPSKKARK-----QSQ-------------------DALTFKQLLKSKTYLGNVLIFAACSAAFFAW 222 (401)
T ss_pred HHHHHHHHHHHHHcCCCCCccc-----cch-------------------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHH
Confidence 8887766665555544332111 000 0113467888888887666666666666777
Q ss_pred HHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 012159 356 LSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (470)
Q Consensus 356 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~ 404 (470)
..+.|.++++ +|+++.+.++......++.+++.++.+++.||+++++.
T Consensus 223 ~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~ 270 (401)
T PRK11043 223 LTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQL 270 (401)
T ss_pred HHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 7888998875 69999999998888888999999999999999987764
No 51
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.96 E-value=1.4e-27 Score=229.38 Aligned_cols=269 Identities=28% Similarity=0.425 Sum_probs=217.6
Q ss_pred HHHHHHHHhhhhhHHHhHH-hhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHH
Q 012159 120 SLAFVICNMDKVNLSVAII-PMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL 198 (470)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 198 (470)
+++.++..+......+.+| .+.+++|.+..+++++.+++.++..+++++.|+++||+|||+++.++.++.+++.++..
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~- 80 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLA- 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHH-
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhh-
Confidence 5667777888888899999 79999999999999999999999999999999999999999999999999988855554
Q ss_pred hhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHH
Q 012159 199 LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLL 278 (470)
Q Consensus 199 ~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~ 278 (470)
++++.+.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.+++|.+++.+.+..+||+.|++.+++
T Consensus 81 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~ 160 (352)
T PF07690_consen 81 FASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAIL 160 (352)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHH
T ss_pred hhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccch
Confidence 43555699999999999999999999999999999999999999999999999999999999999899999999999998
Q ss_pred HHHHHHHH-HhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCC-CHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Q 012159 279 GIAWFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDV-PWKAIFRSKAVWAMIYAHFCGSWGHYTCL 356 (470)
Q Consensus 279 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 356 (470)
.++..++. ++++++++++......+++ .+++.+.. .++.++++|.+|...+..++..+......
T Consensus 161 ~~~~~il~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (352)
T PF07690_consen 161 SLIAAILFILFLPEPPPPRERESPKESE--------------SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFS 226 (352)
T ss_dssp HHHHHHHHHCCC---STTTT--SSTTTT----------------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhHhhhhhhcccccccccccccc--------------cccccccccccccccccchhhhhhhhhhHHHHHHHHhh
Confidence 88776643 3333333332222211110 00000111 24677777877766666666666778899
Q ss_pred HHHHHHHHHHhCCC-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 012159 357 SWLPTYFSEELSLN-LTEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (470)
Q Consensus 357 ~~~~~~~~~~~g~s-~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~ 403 (470)
.++|.|+++.+|++ ..+.+.+..+..+..++++++.|++.||+++++
T Consensus 227 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 274 (352)
T PF07690_consen 227 FFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRR 274 (352)
T ss_dssp HHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred cccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH
Confidence 99999988889999 789999999999999999999999999998765
No 52
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.96 E-value=3.5e-26 Score=222.03 Aligned_cols=259 Identities=20% Similarity=0.267 Sum_probs=213.9
Q ss_pred hhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 012159 128 MDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLV 207 (470)
Q Consensus 128 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 207 (470)
+....+.+.+|.+.+++|++..+.+++.+++.++..++.+++|+++||+|||+++..+.++.+++.+++. ..++++.++
T Consensus 5 ~~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ 83 (377)
T PRK11102 5 LAIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACA-LAQTIDQLI 83 (377)
T ss_pred hHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHH-HHccHHHHH
Confidence 3445667889999999999999999999999999999999999999999999999999999888887775 456678899
Q ss_pred HHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHHHH-
Q 012159 208 LSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGF- 286 (470)
Q Consensus 208 ~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~- 286 (470)
+.|++.|++.+...+...+++.+++++++|++++++.+.+..+|..++|.+++.+.+..+|++.|++.+++.++..+..
T Consensus 84 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 84 YMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999888776654444
Q ss_pred HhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012159 287 KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE 366 (470)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 366 (470)
+..+++++.++++. .+. + + ...++++.+++|.++...+..++..........+.|.++.+.
T Consensus 164 ~~~~~~~~~~~~~~---~~~----~---~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (377)
T PRK11102 164 FFIPETLPKERRQP---FHL----R---T---------TIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIEL 224 (377)
T ss_pred HhCCccCcccccCC---CCh----H---H---------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 34444322111100 000 0 0 001245678889888877777777777777777888888888
Q ss_pred hCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 012159 367 LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVET 406 (470)
Q Consensus 367 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~ 406 (470)
+|+++.+.+.+.....++.++++++.+++.||+++|+...
T Consensus 225 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~ 264 (377)
T PRK11102 225 NGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLR 264 (377)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 8999999999999999999999999999999999987554
No 53
>PRK12382 putative transporter; Provisional
Probab=99.96 E-value=7e-26 Score=221.02 Aligned_cols=307 Identities=16% Similarity=0.131 Sum_probs=222.3
Q ss_pred HHHHHHHHHHHHHhhhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHH
Q 012159 115 LIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (470)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (470)
.+..+.++.++..+......+.+|. +.+++|.|..++|++.+++.++..++++++|+++||+|||++++.+.+...++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~ 95 (392)
T PRK12382 16 SLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAG 95 (392)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHH
Confidence 3444555566666777777788886 678999999999999999999999999999999999999999999877766554
Q ss_pred HHHH---H----hhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhccc
Q 012159 194 ALLP---L----LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL 266 (470)
Q Consensus 194 ~~~~---~----~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 266 (470)
+... . ...+++.+++.|+++|++.+...+...+++.+++|+++|++++++++.+..+|..+||++++++.+.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~ 175 (392)
T PRK12382 96 LAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHF 175 (392)
T ss_pred HHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3221 1 13466889999999999999888888999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHH
Q 012159 267 GWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHF 346 (470)
Q Consensus 267 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 346 (470)
||++.+++..++.++........++.++ ++ ++ + .+.++.+ +.+|...+..+
T Consensus 176 g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~-~---------------------~~~~~~~--~~~~~~~~~~~ 226 (392)
T PRK12382 176 GFAALALTTMVLPLLAWAFNGTVRKVPA---HA--GE-R---------------------PSLWSVV--GLIWKPGLGLA 226 (392)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhccCCCC---Cc--cc-C---------------------chHHHHH--HHHHHhHHHHH
Confidence 9998777655444333222211111111 00 00 0 0011111 12222222233
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch-------------------
Q 012159 347 CGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT------------------- 407 (470)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~------------------- 407 (470)
+..........+.|.|+++ .|++ ..++......++.++++++.|++.||+++|+....
T Consensus 227 l~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (392)
T PRK12382 227 LQGVGFAVIGTFVSLYFAS-KGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAW 303 (392)
T ss_pred HHHHHHhHHHHHHHHHHHh-cCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHH
Confidence 3344555667788888875 4665 35566667778889999999999999999877654
Q ss_pred ------------------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHHHHHHHH
Q 012159 408 ------------------------------------MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTG 451 (470)
Q Consensus 408 ------------------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 451 (470)
.|+.+....++..++|.+.|++.+..+ +...+.+.+++.++..
T Consensus 304 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~ 382 (392)
T PRK12382 304 VALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFG-YPSVFLAGAISAVLGI 382 (392)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-chHHHHHHHHHHHHHH
Confidence 778888889999999999999998765 5555555554444444
Q ss_pred HHH
Q 012159 452 TIV 454 (470)
Q Consensus 452 ~~~ 454 (470)
...
T Consensus 383 ~~~ 385 (392)
T PRK12382 383 IVT 385 (392)
T ss_pred HHH
Confidence 333
No 54
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.96 E-value=5e-26 Score=219.99 Aligned_cols=276 Identities=16% Similarity=0.155 Sum_probs=212.1
Q ss_pred HHHHHHHHHHHhhhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHH
Q 012159 117 GTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATAL 195 (470)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 195 (470)
+..++++++.......+.+..|. +.+++|++..+.+++.+++.+++.++++++|+++||+|||+++.++.++.+++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~ 83 (366)
T TIGR00886 4 FFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLW 83 (366)
T ss_pred HHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 34666777778888889999995 99999999999999999999999999999999999999999999999999998877
Q ss_pred HHHhhh-HHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhc----------
Q 012159 196 LPLLAG-FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE---------- 264 (470)
Q Consensus 196 ~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~---------- 264 (470)
+++ .+ +++.+++.|++.|++.+. .+....++.+++|+++|++++++...+.++|..+++.+++.+..
T Consensus 84 ~~~-~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~ 161 (366)
T TIGR00886 84 AGL-AVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPA 161 (366)
T ss_pred HHH-HhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 754 45 778899999999998654 56678999999999999999999998888888888877776654
Q ss_pred ccCchHHHH-HHHHHHHHHHHHH-HhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHH
Q 012159 265 NLGWESVFY-IFGLLGIAWFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMI 342 (470)
Q Consensus 265 ~~g~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (470)
+.+||+.|+ ..+++.++..++. ...+++++.++++.+.+.+. .+. . .+........+.+++|++|...
T Consensus 162 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~-----~~~~~~~~~~~~~~~~~~~~~~ 231 (366)
T TIGR00886 162 HLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFKG---ARW--S-----VGTGALGDQLKVFRDRHTWILA 231 (366)
T ss_pred cccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhccccc---ccc--c-----ccchhHHHHHHHHhccchhhHH
Confidence 348999994 4455444333333 33333322211110000000 000 0 0000001346778889999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 012159 343 YAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (470)
Q Consensus 343 l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~ 404 (470)
+..++..........+.|.|+++.+|+++.+++.+.....+..++++++.|++.||+++|+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~ 293 (366)
T TIGR00886 232 LLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARK 293 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchh
Confidence 88888777788889999999999899999999999999999999999999999999999863
No 55
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.96 E-value=1.4e-25 Score=220.21 Aligned_cols=320 Identities=14% Similarity=0.136 Sum_probs=236.0
Q ss_pred HHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchh-----hHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHH
Q 012159 115 LIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSV-----AGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIW 189 (470)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~-----~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 189 (470)
....++++.++..+......+.+|.+.+++|.+..+ .|++.+++.++..++.+++|+++||+|||+++..+.++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 94 (408)
T PRK09874 15 NLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGM 94 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHH
Confidence 344556667777788888888999999999988654 488999999999999999999999999999999998888
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCch
Q 012159 190 SLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE 269 (470)
Q Consensus 190 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~ 269 (470)
+++.+++. ..++++.+++.|++.|++.+ ..+....++.+++++++|++++++......+|..++|.+++.+.+..+|+
T Consensus 95 ~~~~~~~~-~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 172 (408)
T PRK09874 95 GIVMVLMG-LAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLR 172 (408)
T ss_pred HHHHHHHH-HHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 88776664 45677899999999999854 56778888999999999999999999999999999999999999989999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHH-HHHHHHH
Q 012159 270 SVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAM-IYAHFCG 348 (470)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~ 348 (470)
+.|++.+++.++..+..+.+.++++...++. ++ . .. ....+.+++++++.. .+..+..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~--------~~---------~~~~~~~~~~~~~~~~~~~~~~~ 231 (408)
T PRK09874 173 PVFFITASVLFLCFLVTLFCIRENFQPVSKK---EM-L--------HM---------REVVTSLKNPKLVLSLFVTTLII 231 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCcccccch---hh-h--------HH---------HHHHHhCcCCchHHHHHHHHHHH
Confidence 9999988877665554444333221111000 00 0 00 011344566666543 3333444
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCch---hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch------------------
Q 012159 349 SWGHYTCLSWLPTYFSEELSLNLT---EAAWVSILPPLASVLVTSIAAQFADNLIATGVETT------------------ 407 (470)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~g~s~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~------------------ 407 (470)
.........+++.|..+..+.... ..+.+..+.+++.+++.++.|++.||+++|+....
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (408)
T PRK09874 232 QVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTP 311 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccH
Confidence 445555667788888765443221 24556666778888999999999999998876554
Q ss_pred -------------------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHHHHHHH
Q 012159 408 -------------------------------------MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLT 450 (470)
Q Consensus 408 -------------------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 450 (470)
.+..+....++..+||.+.|++.+..+ +...+.+.+++.++.
T Consensus 312 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g-~~~~f~~~~~~~l~~ 390 (408)
T PRK09874 312 LQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYG-FRAVFLVTAGVVLFN 390 (408)
T ss_pred HHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcc-hhHHHHHHHHHHHHH
Confidence 667777888999999999999988765 566666666555555
Q ss_pred HHHHHhhc
Q 012159 451 GTIVWLAF 458 (470)
Q Consensus 451 ~~~~~~~~ 458 (470)
....+...
T Consensus 391 ~~~~~~~~ 398 (408)
T PRK09874 391 AVYSWNSL 398 (408)
T ss_pred HHHHHHHH
Confidence 44444433
No 56
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.95 E-value=1.1e-25 Score=219.13 Aligned_cols=268 Identities=15% Similarity=0.092 Sum_probs=206.1
Q ss_pred HHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHH
Q 012159 118 TTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP 197 (470)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 197 (470)
.++++.++..++...+....+.+.+++|.+..+.+++.+.+.+++.++.+++|+++||+|||++++++.++++++.+++.
T Consensus 7 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~ 86 (393)
T PRK11195 7 AIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLML 86 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHH
Confidence 45666777777666666666777889999999999999999999999999999999999999999999999888776653
Q ss_pred HhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHH
Q 012159 198 LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGL 277 (470)
Q Consensus 198 ~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~ 277 (470)
...+ .++.|+++|++.+...|...+++.|++|+++|++++|+.+....+|.++||.++|++.+. .|+..+.+.+.
T Consensus 87 -~~~~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~ 161 (393)
T PRK11195 87 -FGIH---PLLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCAL 161 (393)
T ss_pred -HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 3333 267899999999999999999999999999999999999999999999999999999885 47777776665
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Q 012159 278 LGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 357 (470)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 357 (470)
+.++..+....++++++++++...+... . . ++. ...++.++++|.++...+..++..........
T Consensus 162 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~---~----~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (393)
T PRK11195 162 IYLLAALFNLFIPRLGARRPGQSWNPIA---L---L----RDF-----FHACRVLWRDKLGRFSLAGTTLFWGAGATLRF 226 (393)
T ss_pred HHHHHHHHHhcCCCCcccccccCCCHHH---H---H----HHH-----HHHHHHHHhCchhHHHHHHHHHHHHHHHHHHH
Confidence 5544444445555443221111000000 0 0 000 01135677888777665555555555566677
Q ss_pred HHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 012159 358 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVE 405 (470)
Q Consensus 358 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~ 405 (470)
.+|.|+++.+|.++.+.|.+.....++.+++.++.+++.||.++++..
T Consensus 227 ~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~ 274 (393)
T PRK11195 227 LVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVL 274 (393)
T ss_pred HHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchH
Confidence 788899888999999999999999999999999999999988777543
No 57
>TIGR00895 2A0115 benzoate transport.
Probab=99.95 E-value=3.5e-26 Score=223.47 Aligned_cols=289 Identities=25% Similarity=0.322 Sum_probs=214.4
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHH
Q 012159 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (470)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (470)
+++.+...++..+.............|.+.+++|.+..+.+++.+++.++..++.++.|+++||+|||+++..+.++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 94 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSV 94 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHH
Confidence 45666666667777777778888889999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHH
Q 012159 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (470)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~ 271 (470)
+.+++. ..++++.+++.+++.|++.+...+...+++.|++|+++|++++++...+..+|..++|.+++.+.+..||++.
T Consensus 95 ~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~ 173 (398)
T TIGR00895 95 FTLLCA-LATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSL 173 (398)
T ss_pred HHHHHH-HccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceee
Confidence 877664 5566788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-HHHHhhccCCCCCCCCCCCccchhhhhhhhh----hh---HHhh-hccC-CCCCHHHHhcC---HHH
Q 012159 272 FYIFGLLGIAWF-SGFKILQEGETSNGATLAPRSNYINMKKSLS----AS---LEEM-GESL-KDVPWKAIFRS---KAV 338 (470)
Q Consensus 272 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~-~~~~-~~~~~~~~~~~---~~~ 338 (470)
|++.+++.++.. +....++++++....+ ++++......+... +. ..+. .+.. ....++.++++ +..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (398)
T TIGR00895 174 FYVGGIAPLLLLLLLMRFLPESIDFLVSK-RPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARIT 252 (398)
T ss_pred hhhhhhHHHHHHHHHHHhCCCCChHHHhc-CHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHH
Confidence 999876554443 3344444433211111 00000000000000 00 0000 0000 01112223322 334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 012159 339 WAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (470)
Q Consensus 339 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~ 403 (470)
+.+.+..++..........+.|.+. +.+|+++.+.+.+.....++.++++++.+++.||+++|.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 316 (398)
T TIGR00895 253 VLLWLLYFMLLVGVYFLTNWLPKLM-VELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRV 316 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHH
Confidence 4445555566666777778888554 567999999999999999999999999999999999883
No 58
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.95 E-value=1.1e-25 Score=225.56 Aligned_cols=295 Identities=18% Similarity=0.233 Sum_probs=203.5
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhc--------CCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHH
Q 012159 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRF--------GWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQ 183 (470)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~ 183 (470)
..+.++...++.+..+++...+++..|.+.+++ +.+..+.+++.+++.++..++++++|+++||+|||++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~ 89 (479)
T PRK10077 10 IFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLK 89 (479)
T ss_pred HHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 456667777788888888888888888888777 888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHh-----------hhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHH
Q 012159 184 TGVLIWSLATALLPLL-----------AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGS 252 (470)
Q Consensus 184 ~~~~~~~~~~~~~~~~-----------~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~ 252 (470)
++.++++++.++.++. .+.++.+++.|+++|++.|...+...++++|++|+++|++++++.+.+..+|.
T Consensus 90 ~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~ 169 (479)
T PRK10077 90 IAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQ 169 (479)
T ss_pred HHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHH
Confidence 9999888877665431 12346788999999999999999999999999999999999999999999999
Q ss_pred HHHHhhHHhhh--------cccCchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhh-----hhhhhHHh
Q 012159 253 VAGLLLAPPII--------ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKK-----SLSASLEE 319 (470)
Q Consensus 253 ~~g~~~~~~l~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 319 (470)
++++.+++.+. +.+|||+.|++.+++.++..+..++++|+++....+.+.++......+ ......++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (479)
T PRK10077 170 LVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQE 249 (479)
T ss_pred HHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHH
Confidence 99988776553 356899999998887777666666676654321111111100000000 00000000
Q ss_pred hhccCC--CCCHHHHhcCHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHH
Q 012159 320 MGESLK--DVPWKAIFRSKAVWA---MIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQ 394 (470)
Q Consensus 320 ~~~~~~--~~~~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~ 394 (470)
..+..+ ....+..+.-..... .....+..........++.|.+.+ ..|++....++.....++..+++.++.++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~-~~g~~~~~~~~~~~~~~~~~~i~~~~~g~ 328 (479)
T PRK10077 250 IKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFK-TLGASTDIALLQTIIVGVINLTFTVLAIM 328 (479)
T ss_pred HHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHH-HcCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 000001111000000 011111111222334556677766 46888877777778888899999999999
Q ss_pred HHHHHHhcCCcch
Q 012159 395 FADNLIATGVETT 407 (470)
Q Consensus 395 l~dr~~~~~~~~~ 407 (470)
++||+++|+....
T Consensus 329 l~dr~g~r~~~i~ 341 (479)
T PRK10077 329 TVDKFGRKPLQII 341 (479)
T ss_pred HHHHhcChHHHHH
Confidence 9999998875543
No 59
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.95 E-value=2.1e-25 Score=216.49 Aligned_cols=305 Identities=11% Similarity=-0.021 Sum_probs=232.2
Q ss_pred HHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHH-HHHHHHHHH
Q 012159 119 TSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLI-WSLATALLP 197 (470)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~-~~~~~~~~~ 197 (470)
+.+.++..++......+++|.+.+++|.+..++|++.+++.+...++++++|+++||+||+........+ ..+..+.+.
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~ 88 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFS 88 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 4556667777778888999999999999999999999999999999999999999999985433222111 111222222
Q ss_pred HhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHH
Q 012159 198 LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGL 277 (470)
Q Consensus 198 ~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~ 277 (470)
...++++.+++.|+++|.+.+...|...++..++ +++|++.+|....+.++|.+++|++++.+.+++|||..|++.++
T Consensus 89 ~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~ 166 (382)
T TIGR00902 89 AGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTA 166 (382)
T ss_pred HhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHH
Confidence 3456778999999999999888889988887654 47899999999999999999999999999999999999988766
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Q 012159 278 LGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 357 (470)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 357 (470)
+.++..+ .+.++++.+++++.. + ++ ..+...+++++|+|++|...+..++...+......
T Consensus 167 ~~~~~~~-~~~~~~~~~~~~~~~-~-~~-----------------~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~ 226 (382)
T TIGR00902 167 GLAFMLI-GFLIKPTIPPKDAIP-E-DE-----------------SQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYG 226 (382)
T ss_pred HHHHHHH-HHHcCCCCCCCcccc-c-cc-----------------cccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHH
Confidence 5333332 333333211111100 0 00 00112357889999999999999998899999999
Q ss_pred HHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch------------------------------
Q 012159 358 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT------------------------------ 407 (470)
Q Consensus 358 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~------------------------------ 407 (470)
+.|.|+++ .|.++.+.|.+.....++.+++.++.+++.||++.|+.+..
T Consensus 227 ~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~ 305 (382)
T TIGR00902 227 FSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCG 305 (382)
T ss_pred HHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHH
Confidence 99999986 79999999999999999999999999999999999886665
Q ss_pred ------------------------HHHHH-HhhhhHHHHHHHHHHHhhccCCceehhhHHHHHHHH
Q 012159 408 ------------------------MGITN-TVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFY 448 (470)
Q Consensus 408 ------------------------~g~~~-~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~ 448 (470)
.++++ ....++..+|+.++|++.|..+. ..++..++..+
T Consensus 306 ~~~~~~~~~~~~i~~~~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~--~~~~~~~~~~~ 369 (382)
T TIGR00902 306 TFAVCHLAAMRYIAAQPGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA--GTFVFMAIIAA 369 (382)
T ss_pred HHHHHHHHHHHHHHhCCHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH--HHHHHHHHHHH
Confidence 44444 34568899999999999998763 33444444333
No 60
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.95 E-value=1.8e-25 Score=218.02 Aligned_cols=308 Identities=17% Similarity=0.166 Sum_probs=227.9
Q ss_pred HHHHHHHHhhhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHH
Q 012159 120 SLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL 198 (470)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 198 (470)
....++.........++++. +.+++|++..++|++.++..+...+.++++|+++||+|||+++..+.++.+++.+++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~- 94 (400)
T PRK11646 16 LIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMA- 94 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHH-
Confidence 34455555555555666554 6788999999999999999999999999999999999999999999999988887774
Q ss_pred hhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHH
Q 012159 199 LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLL 278 (470)
Q Consensus 199 ~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~ 278 (470)
..++++.+++.|++.|++.+...+...+++.+++|+++|++++|+.+....+|..+||++++++. .+||++.|++.+++
T Consensus 95 ~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~ 173 (400)
T PRK11646 95 IAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVL 173 (400)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHH
Confidence 45677889999999999998888999999999999999999999999999999999999999998 67999999998877
Q ss_pred HHHHHHHH-HhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Q 012159 279 GIAWFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 357 (470)
Q Consensus 279 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 357 (470)
.++..+.. +..+++++ + + .+++ ...++++++++|+++...+..+...........
T Consensus 174 ~~~~~i~~~~~~~~~~~-~-~---~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (400)
T PRK11646 174 FVLAAAFNAWLLPAYKL-S-T---VRTP-------------------VREGMTRVLRDKRFVTYVLTLTGYYMLAVQVML 229 (400)
T ss_pred HHHHHHHHHHhCCcccc-c-c---cchh-------------------hHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHH
Confidence 66554433 33332111 0 0 0000 011356788888887766655554444444567
Q ss_pred HHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCCcch-----------------------------
Q 012159 358 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADN-LIATGVETT----------------------------- 407 (470)
Q Consensus 358 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~~~~----------------------------- 407 (470)
++|.|+++..+ ++.+.+++.+...++...+....+++.|| ++.++....
T Consensus 230 ~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ 308 (400)
T PRK11646 230 MLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFY 308 (400)
T ss_pred hhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 88999987644 67788888888777776666666666654 443332221
Q ss_pred --------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCc---eehhhHHHHHHHHHHHHHH
Q 012159 408 --------------------------MGITNTVGAVPGIVGVALTGYLLDSTHS---WSMSLFAPSIFFYLTGTIV 454 (470)
Q Consensus 408 --------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~---~~~~~~~~~~~~~~~~~~~ 454 (470)
.|..+....++..+||.+.|++.|..+. ....+.+..+..++.....
T Consensus 309 ~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (400)
T PRK11646 309 IGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLAL 384 (400)
T ss_pred HHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHHH
Confidence 7888888999999999999999987532 3344444343333333333
No 61
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.95 E-value=5.2e-26 Score=218.87 Aligned_cols=247 Identities=17% Similarity=0.224 Sum_probs=198.9
Q ss_pred hhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 012159 129 DKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVL 208 (470)
Q Consensus 129 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 208 (470)
....+++.+|.+.+++|.+..+.+++.+++.++..++.++.|+++||+|||+++.++.++.+++.++. ..++.+.+++
T Consensus 15 ~~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~--~~~~~~~l~~ 92 (355)
T TIGR00896 15 ALTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR--SAPGTALLFA 92 (355)
T ss_pred ccccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH--HhccHHHHHH
Confidence 34566788999999999999999999999999999999999999999999999999988877776555 3456678889
Q ss_pred HHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhccc--CchHHHHHHHHHHHHHHHHH
Q 012159 209 SRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL--GWESVFYIFGLLGIAWFSGF 286 (470)
Q Consensus 209 ~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~--g~~~~~~~~~~~~~~~~~~~ 286 (470)
.|++.|++.+...+....++.++++ ++|++++++++.+..+|..+++.+++.+.++. +||+.|.+.+++.++...
T Consensus 93 ~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~-- 169 (355)
T TIGR00896 93 GTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL-- 169 (355)
T ss_pred HHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH--
Confidence 9999999998888888888899886 68999999999999999999999999888765 399988877765443322
Q ss_pred HhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012159 287 KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE 366 (470)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 366 (470)
.++++.+++++... + ......++.+|+|.+|...+..++....++....++|.|+++
T Consensus 170 ~~~~~~~~~~~~~~-~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~- 226 (355)
T TIGR00896 170 AWIPQVRRRVAANQ-T---------------------TTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS- 226 (355)
T ss_pred HHhhhhccccCCCC-C---------------------CCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 22332221111000 0 001123567889999888777777777788888999999986
Q ss_pred hCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 012159 367 LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (470)
Q Consensus 367 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~ 403 (470)
.|++..+.+.+.+...++.++++++.|++.||++.|+
T Consensus 227 ~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~ 263 (355)
T TIGR00896 227 HGASAATAGSLLALMQLAQAASALLIPALARRVKDQR 263 (355)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccch
Confidence 6999999999999999999999999999999996554
No 62
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.95 E-value=6.5e-25 Score=210.61 Aligned_cols=286 Identities=32% Similarity=0.508 Sum_probs=248.8
Q ss_pred HHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHH
Q 012159 118 TTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP 197 (470)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 197 (470)
.+.+..+..........+..|.+.+++|.+..+.+++.+...++..++.++.|+++||+|||+.+.++.++..++.++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~ 82 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLA 82 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHH
Confidence 34556677778888888999999999999999999999999999999999999999999999999999999888887775
Q ss_pred HhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHH
Q 012159 198 LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGL 277 (470)
Q Consensus 198 ~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~ 277 (470)
..++++.+++.|++.|++.+...+...+++.|++|+++|++.+++.+....+|..++|.+++.+.+..+|++.+++.++
T Consensus 83 -~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (352)
T cd06174 83 -FASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAI 161 (352)
T ss_pred -HhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 4467789999999999999999999999999999999999999999999999999999999999999899999999888
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Q 012159 278 LGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 357 (470)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 357 (470)
+.++..+...+++ |.++...+..++..........
T Consensus 162 ~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~ 196 (352)
T cd06174 162 LGLLLALLLLFLL---------------------------------------------RLLLLLALAFFLLSFGYYGLLT 196 (352)
T ss_pred HHHHHHHHHHHHH---------------------------------------------HHHHHHHHHHHHHHhHHHHHHH
Confidence 8776665554443 4577777888888888899999
Q ss_pred HHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-Ccch-----------------------------
Q 012159 358 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATG-VETT----------------------------- 407 (470)
Q Consensus 358 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~-~~~~----------------------------- 407 (470)
+.|.+.++.+|.+..+.+.......++..++.++.+++.||+++|+ ....
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g 276 (352)
T cd06174 197 YLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLG 276 (352)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 9999999877999999999999999999999999999999999998 5443
Q ss_pred --------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHHHHHHH
Q 012159 408 --------------------------MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLT 450 (470)
Q Consensus 408 --------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 450 (470)
.+..+....++..+++.+.|.+.+..+ +...+.+.++..++.
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~-~~~~~~~~~~~~~i~ 344 (352)
T cd06174 277 FGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGG-YGGVFLILAALALLA 344 (352)
T ss_pred HHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-cchHHHHHHHHHHHH
Confidence 888888999999999999999988654 454555544444433
No 63
>PRK10054 putative transporter; Provisional
Probab=99.95 E-value=1.6e-25 Score=218.07 Aligned_cols=295 Identities=12% Similarity=0.120 Sum_probs=224.7
Q ss_pred HHHHHHHHHHHHhhhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHH
Q 012159 116 IGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATA 194 (470)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 194 (470)
+..+.+..++.........+++|. +.+++|++..++|++.+++.++..+++++.|+++||+|||++++++.++.+++.+
T Consensus 9 ~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~ 88 (395)
T PRK10054 9 TSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFI 88 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHH
Confidence 334555666667777777777665 6678999999999999999999999999999999999999999999888888776
Q ss_pred HHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHH
Q 012159 195 LLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYI 274 (470)
Q Consensus 195 ~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~ 274 (470)
+++ ..++++.+++++++.|.+.+...+...++..|..++++|++++++.+...++|.++||++++++.+ .+|+.+|++
T Consensus 89 ~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~ 166 (395)
T PRK10054 89 AIP-LVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWL 166 (395)
T ss_pred HHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHH
Confidence 664 456667788888888888777888899999999999999999999999999999999999999875 699999999
Q ss_pred HHHHHHHHHHHHH-hhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHH
Q 012159 275 FGLLGIAWFSGFK-ILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHY 353 (470)
Q Consensus 275 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 353 (470)
.+++.++..+... .+++++++++++ +++ ....++.+++|.++...+..++..+...
T Consensus 167 ~~~~~~i~~i~~~~~~~~~~~~~~~~---~~~--------------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 223 (395)
T PRK10054 167 AAICSAFPLVFIQIWVQRSEKAIATE---TGS--------------------VWSPSVLLQDKALLWFTCSGFLASFVSG 223 (395)
T ss_pred HHHHHHHHHHHHHHHHhccccccccc---hhh--------------------hhhhhhhccCceehHHHHHHHHHHHHHH
Confidence 8887766544433 344433221100 000 0112567889999888887777777766
Q ss_pred HHHHHHHHHHHHH--hCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch------------------------
Q 012159 354 TCLSWLPTYFSEE--LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT------------------------ 407 (470)
Q Consensus 354 ~~~~~~~~~~~~~--~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~------------------------ 407 (470)
....+.+.|.... .+.+....+.+.....+.........|++.||.++|+....
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (395)
T PRK10054 224 AFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGM 303 (395)
T ss_pred HhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHH
Confidence 6666777776533 34556667777777777777778888999999988775443
Q ss_pred --------------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCce
Q 012159 408 --------------------------------MGITNTVGAVPGIVGVALTGYLLDSTHSW 436 (470)
Q Consensus 408 --------------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~ 436 (470)
.+.. ..+.+|..+||.++|++.|..+..
T Consensus 304 ~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~-~~~~~G~~~Gp~~~G~l~~~~g~~ 363 (395)
T PRK10054 304 SAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQ-SLGWLGAAINPLVSGVILTTLPPW 363 (395)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHH-HHHHHHHHHHHHHHHHHHHHcChh
Confidence 2222 245578899999999999987543
No 64
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.95 E-value=5.9e-25 Score=219.35 Aligned_cols=317 Identities=14% Similarity=0.149 Sum_probs=238.3
Q ss_pred HHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhh-----cCcHH-HHHHHHHHH
Q 012159 117 GTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF-----GGRKV-LQTGVLIWS 190 (470)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----g~r~~-~~~~~~~~~ 190 (470)
..+++..+..++........+|.+.++.|.+..++|.. +.....+ ++.+++|+++||+ |||+. +.++.++.+
T Consensus 15 ~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~ 92 (491)
T PRK11010 15 AILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLL 92 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHH
Confidence 34455566677777788888999999999999999997 4444444 6889999999999 99885 556666666
Q ss_pred HHHHHHHHhh--hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhc-ccC
Q 012159 191 LATALLPLLA--GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-NLG 267 (470)
Q Consensus 191 ~~~~~~~~~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~g 267 (470)
++...+++.. ++++.+.+.+++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++++.+ ..|
T Consensus 93 ~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~G 172 (491)
T PRK11010 93 VAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLG 172 (491)
T ss_pred HHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 6655554432 4567888899999999999999999999999999999999999999999999999999999998 579
Q ss_pred chHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHH
Q 012159 268 WESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFC 347 (470)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 347 (470)
||..|++.+++.++..+..+..+|+++.. + ++++. .+ ....+++++++++..|...+..++
T Consensus 173 Wr~~f~i~a~l~ll~~l~~~~~~e~~~~~--~--~~~~~---~~------------~~~~~l~~~~~~~~~~~~ll~~~l 233 (491)
T PRK11010 173 WQGMYWLMAALLIPCIIATLLAPEPTDTI--P--VPKTL---EQ------------AVVAPLRDFFGRNNAWLILLLIVL 233 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcccc--c--cccch---hh------------hHHHHHHHHHcCcCHHHHHHHHHH
Confidence 99999999988776666555555432211 0 00000 00 001135667777877777666666
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCchhhHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCcch-------------------
Q 012159 348 GSWGHYTCLSWLPTYFSEELSLNLTEAAWVSI-LPPLASVLVTSIAAQFADNLIATGVETT------------------- 407 (470)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~-~~~~~~~~~~~~~g~l~dr~~~~~~~~~------------------- 407 (470)
..........+.+.|+.+.+|++..+.+.+.. ...++.+++.++.|+++||+++|+....
T Consensus 234 ~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~ 313 (491)
T PRK11010 234 YKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITD 313 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 66666777778888887778999999999874 5568999999999999999998765432
Q ss_pred ----------------------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHHHH
Q 012159 408 ----------------------------------------MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFF 447 (470)
Q Consensus 408 ----------------------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~ 447 (470)
.+..+....++..+++.+.|++.|..| |...+.+..++.
T Consensus 314 ~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G-~~~~f~~~~~~~ 392 (491)
T PRK11010 314 KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHG-WPTFYLFSVAAA 392 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHH
Confidence 677778888888888889999999765 555555555444
Q ss_pred HHHHHHHH
Q 012159 448 YLTGTIVW 455 (470)
Q Consensus 448 ~~~~~~~~ 455 (470)
+......+
T Consensus 393 l~~l~~~~ 400 (491)
T PRK11010 393 VPGLLLLL 400 (491)
T ss_pred HHHHHHHH
Confidence 44433333
No 65
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.95 E-value=6.7e-25 Score=197.68 Aligned_cols=307 Identities=22% Similarity=0.262 Sum_probs=261.1
Q ss_pred hhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 012159 128 MDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLV 207 (470)
Q Consensus 128 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 207 (470)
-..+..++.++.+.+++|+|.+..|++.++..++..+.+++..++.+|+|.++.+..++++.+++..+-... +.+.++
T Consensus 26 ~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~--~~~~L~ 103 (395)
T COG2807 26 PAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG--GLPLLF 103 (395)
T ss_pred hhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc--cHHHHH
Confidence 456777888999999999999999999999999999999999999999999999999999999998776533 447889
Q ss_pred HHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhccc-CchHHHHHHHHHHHHHHHHH
Q 012159 208 LSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-GWESVFYIFGLLGIAWFSGF 286 (470)
Q Consensus 208 ~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-g~~~~~~~~~~~~~~~~~~~ 286 (470)
.+..+.|.+.+......++++.+.|| ++-+..+|+|....++|.++++.+.-.+.++. |||....+.++++++.++.+
T Consensus 104 ~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~W 182 (395)
T COG2807 104 LGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIW 182 (395)
T ss_pred HHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998 78999999999999999999999999998887 79999999999998887776
Q ss_pred HhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012159 287 KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE 366 (470)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 366 (470)
+.-..+++...... +..+-..++|+|.-|.+.+...+.++.+|....|+|.++.|.
T Consensus 183 lPq~~r~~~~~~~~------------------------~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~ 238 (395)
T COG2807 183 LPQALREQAASIAT------------------------KLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDR 238 (395)
T ss_pred hhhccccccccccc------------------------ccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHc
Confidence 65432211111100 011124689999999999999999999999999999999975
Q ss_pred hCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch---------------------------------------
Q 012159 367 LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT--------------------------------------- 407 (470)
Q Consensus 367 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~--------------------------------------- 407 (470)
|+|+.++|.+.+...+..+...+..+.+.+|...++....
T Consensus 239 -G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw~~llG~G~G~~F~la 317 (395)
T COG2807 239 -GLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILWALLLGLGQGGAFPLA 317 (395)
T ss_pred -CCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhCccchHHHHH
Confidence 9999999999999999999999999999998766665554
Q ss_pred -----------------HHHHHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHHHHHHHHHHHHhhccCCC
Q 012159 408 -----------------MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSK 462 (470)
Q Consensus 408 -----------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (470)
.|+.+.++++...+||++.|++.|.+++|...+.......+.....-+...+..+
T Consensus 318 L~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~r~~~ 389 (395)
T COG2807 318 LTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAGRNRY 389 (395)
T ss_pred HHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhcchhHH
Confidence 8899999999999999999999999999998888776666655555544444433
No 66
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.95 E-value=4.2e-25 Score=222.04 Aligned_cols=322 Identities=18% Similarity=0.187 Sum_probs=229.2
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhc-----CCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHH
Q 012159 111 QRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRF-----GWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTG 185 (470)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 185 (470)
..++.+.++.++.+..+++...++...|.+..++ +.+..+.+++.+.+.++..++.+++|+++||+|||+++.++
T Consensus 13 ~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~ 92 (502)
T TIGR00887 13 QHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGME 92 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 3456777778888889999999998888876542 34566789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhh-----HHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHH
Q 012159 186 VLIWSLATALLPLLAG-----FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAP 260 (470)
Q Consensus 186 ~~~~~~~~~~~~~~~~-----~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 260 (470)
.+++.++.++.+...+ +++.+++.|++.|++.+...+....++.|++|+++|++++++.+....+|.++++.++.
T Consensus 93 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~ 172 (502)
T TIGR00887 93 LIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVAL 172 (502)
T ss_pred HHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988888877654322 25789999999999999999999999999999999999999999999999999998887
Q ss_pred hhhc-----------------------ccCchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCcc-chhhhhh----h
Q 012159 261 PIIE-----------------------NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRS-NYINMKK----S 312 (470)
Q Consensus 261 ~l~~-----------------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~ 312 (470)
.+.. ..+||+.|.+.++.+++..+..+++||+++....+.++++ ......+ .
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~ 252 (502)
T TIGR00887 173 IVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVK 252 (502)
T ss_pred HHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccc
Confidence 6532 2479999988888777777777888888764221111111 0000000 0
Q ss_pred hhhhHHh---h--hccCCCCCHHHHhcC---HHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHH----
Q 012159 313 LSASLEE---M--GESLKDVPWKAIFRS---KAVWA----MIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAW---- 376 (470)
Q Consensus 313 ~~~~~~~---~--~~~~~~~~~~~~~~~---~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~---- 376 (470)
..+..++ . +++....++++++++ ++.+. ..+..++..+.+++...+.|.++++ .|++....+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~ 331 (502)
T TIGR00887 253 IEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAYE 331 (502)
T ss_pred cccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccchhHHH
Confidence 0000000 0 001111246666653 22211 1222333444556667778898874 6886543221
Q ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHHhcCCcch-----------------------------------------
Q 012159 377 --------VSILPPLASVLVTSIAAQFADNLIATGVETT----------------------------------------- 407 (470)
Q Consensus 377 --------~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~----------------------------------------- 407 (470)
...+..++.+++.++.++++||+|||+....
T Consensus 332 ~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (502)
T TIGR00887 332 ELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNA 411 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCc
Confidence 2334445677788999999999999986554
Q ss_pred ------------------HHHHHHhhhhHHHHHHHHHHHhhccC
Q 012159 408 ------------------MGITNTVGAVPGIVGVALTGYLLDST 433 (470)
Q Consensus 408 ------------------~g~~~~~~~~~~~ig~~~~g~l~~~~ 433 (470)
.|+.+.++.++++++|.+.+.+.+..
T Consensus 412 ~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 455 (502)
T TIGR00887 412 TTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHG 455 (502)
T ss_pred hhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccc
Confidence 77778888888999999998888743
No 67
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.95 E-value=7.9e-27 Score=216.45 Aligned_cols=279 Identities=17% Similarity=0.205 Sum_probs=225.1
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHH
Q 012159 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (470)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (470)
.++.+.++++...++.++.+.+....+.+.+.+|+++...|++.+++.+.+.++++++|+++||++||+++.+|..++.+
T Consensus 31 ~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~ 110 (493)
T KOG1330|consen 31 PTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTL 110 (493)
T ss_pred chHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHH
Confidence 45778888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccC-chH
Q 012159 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WES 270 (470)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-~~~ 270 (470)
+.+..++. +.+|++.++|.+.|+|.+...|+.+++++|.+|.++|++++++++.+..+|..+|.+++..+.++.+ |||
T Consensus 111 Av~~~~fs-~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~ 189 (493)
T KOG1330|consen 111 AVFASGFS-NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRW 189 (493)
T ss_pred HHHHHHHH-HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEE
Confidence 99888654 7789999999999999999999999999999999999999999999999999999999999998877 999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHH
Q 012159 271 VFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSW 350 (470)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 350 (470)
.|+..+++.+++.++.+++.++++....++.+.+... .........+.+.+.+++.+....+.+....+
T Consensus 190 af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~-----------~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~f 258 (493)
T KOG1330|consen 190 AFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKM-----------VKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQF 258 (493)
T ss_pred EEEeehHHHHHHHHHHHhhccCcccccccccccCCcC-----------CCCccchHHHHHHHHccCceeeehHHHHHHHH
Confidence 9999999988776665555444332222111111100 00011112234556666776666666666666
Q ss_pred HHHHHHHHHHHHHHHH---hCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 012159 351 GHYTCLSWLPTYFSEE---LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (470)
Q Consensus 351 ~~~~~~~~~~~~~~~~---~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~ 402 (470)
....+..|.|.++... .|++.....++..+..+++.+|.+++|.++||+.+.
T Consensus 259 v~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~ 313 (493)
T KOG1330|consen 259 VIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRI 313 (493)
T ss_pred hccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHh
Confidence 6666666766665432 356666777788888899999999999999997663
No 68
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.95 E-value=3e-24 Score=209.25 Aligned_cols=299 Identities=14% Similarity=0.061 Sum_probs=204.4
Q ss_pred HHHHHHHHHHhhhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHH-HHHHhhhhhHHHhhhhcCcHHHH-HHHHHHHHHHH
Q 012159 118 TTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFW-GYALSQLPGGWLAKIFGGRKVLQ-TGVLIWSLATA 194 (470)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g~r~~~~-~~~~~~~~~~~ 194 (470)
...+..++..+......+.+|. +.+++|.+..++|++.+...+ +..++.+++++ .||+|+|+.++ .+.++.+++..
T Consensus 19 ~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~ 97 (393)
T PRK15011 19 AFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACT 97 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHH
Confidence 3344466666666667777666 678899999999999876655 55555555555 99999998754 44455455555
Q ss_pred HHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccch--hhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHH
Q 012159 195 LLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEER--SRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF 272 (470)
Q Consensus 195 ~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~ 272 (470)
+.+ ..++++.+++.+.+.|...+...|...+++.++.++++| +...++.+.+.++|.++||++++.+.+++|||+.|
T Consensus 98 ~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f 176 (393)
T PRK15011 98 LFA-WNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMY 176 (393)
T ss_pred HHH-HhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHH
Confidence 553 456666666555555555567788888888888776555 34557888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHh-hccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcC-HHHHHHHHHHHHHHH
Q 012159 273 YIFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRS-KAVWAMIYAHFCGSW 350 (470)
Q Consensus 273 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~ 350 (470)
++.+++.++..+..+. +++.++.++. . +.+. +...++ +..+...+..++...
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~ 230 (393)
T PRK15011 177 LSAAVAFIVCGVMVWLFLPSMRKELPL-A-TGTL------------------------EAPRRNRRDTLLLFVICTLMWG 230 (393)
T ss_pred HHHHHHHHHHHHHHHhhcCccCCCCcc-c-cccc------------------------cccccccccHHHHHHHHHHHHH
Confidence 9988877666554443 4443221111 0 0000 000011 222333333344445
Q ss_pred HHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch-----------------------
Q 012159 351 GHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT----------------------- 407 (470)
Q Consensus 351 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~----------------------- 407 (470)
.......+.|.|+++.+|+++.+.+.+.....++.+++.++.|+++||+++|+....
T Consensus 231 ~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 310 (393)
T PRK15011 231 TNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLG 310 (393)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 555566789999988899999999988888888889999999999999999875443
Q ss_pred -------------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHH
Q 012159 408 -------------------------------MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSI 445 (470)
Q Consensus 408 -------------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~ 445 (470)
.+.++....+|..+++.+.|++.+..+ +...+.+..+
T Consensus 311 ~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g-~~~~~~~~~~ 378 (393)
T PRK15011 311 LQLLNAIYIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWN-YHAVFWFALV 378 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHH
Confidence 455556677888899999999888654 4444444333
No 69
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.94 E-value=9.2e-25 Score=199.88 Aligned_cols=307 Identities=18% Similarity=0.141 Sum_probs=254.9
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHH
Q 012159 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (470)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (470)
..+..+...+++.++......+.+|.+.+.++++..+.+++...+..++.+.+++.|++.+|+|+|+.+++++.++++++
T Consensus 13 ~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~ 92 (422)
T COG0738 13 LAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGA 92 (422)
T ss_pred eHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 34445555666777777788888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH--hhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcc------
Q 012159 194 ALLPL--LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN------ 265 (470)
Q Consensus 194 ~~~~~--~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~------ 265 (470)
.++.- ...++..+++..++.|.|.+...++.+.++....++++..+.+++.+.+.++|.++||++++.++.+
T Consensus 93 ~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~ 172 (422)
T COG0738 93 ALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTM 172 (422)
T ss_pred HHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhcc
Confidence 88742 3456678889999999999999999999999999999999999999999999999999999998873
Q ss_pred -------------cCchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHH
Q 012159 266 -------------LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAI 332 (470)
Q Consensus 266 -------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (470)
-.|+++|.+.+...++..+.....+.++.+.......+. ++....++
T Consensus 173 ~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~~--------------------~~~~~~~l 232 (422)
T COG0738 173 SAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGAS--------------------GSAGLSSL 232 (422)
T ss_pred CHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCccccccccc--------------------ccchHHHH
Confidence 137788888777766665555544432222111110000 01134789
Q ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch-----
Q 012159 333 FRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT----- 407 (470)
Q Consensus 333 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~----- 407 (470)
+++|+++...++.+++...+.....+++.|+.+..|.+..+++...+.+.++.++|++++.++..|+...+.+..
T Consensus 233 ~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ 312 (422)
T COG0738 233 FQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIA 312 (422)
T ss_pred HhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 999999999999999999999999999999998789999999999999999999999999999999998877665
Q ss_pred -----------------------------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCceehhh
Q 012159 408 -----------------------------------------------MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSL 440 (470)
Q Consensus 408 -----------------------------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~ 440 (470)
.+.....+.+|+++.|++.|++.|..+.....+
T Consensus 313 ill~~~~~l~~g~v~~~~l~~ig~F~simfPTIfslal~~l~~~ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~ 392 (422)
T COG0738 313 ILLLLAVALIGGVVALYALFLIGLFNSIMFPTIFSLALKNLGEHTSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFL 392 (422)
T ss_pred HHHHHHHHHhcChHHHHHHHHHHHHhHHHHHHHHHHHHhccCccccccceeeeeheecchHHHHHHHHHHHhhhhHHHHH
Confidence 445556778899999999999999987554433
No 70
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.94 E-value=1.9e-24 Score=209.99 Aligned_cols=259 Identities=14% Similarity=0.050 Sum_probs=199.2
Q ss_pred HHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCc----HHHHHHHHHHHHHHHHHHH
Q 012159 123 FVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGR----KVLQTGVLIWSLATALLPL 198 (470)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r----~~~~~~~~~~~~~~~~~~~ 198 (470)
++........+.+++|.+.+++|.+..++|++.+++.++..++++++|+++||+||| +.+.+...+. .+....
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~---~~~~~~ 89 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF---AVAFWF 89 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH---HHHHHH
Confidence 444445567888889998899999999999999999999999999999999999984 3333222221 122223
Q ss_pred hhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHH
Q 012159 199 LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLL 278 (470)
Q Consensus 199 ~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~ 278 (470)
..++++.+++.|++.|++.+...|...++..++ .++|+++++....+.++|.++||++++++.+++|||..|++.++.
T Consensus 90 ~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~ 167 (382)
T PRK11128 90 GAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAG 167 (382)
T ss_pred hcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHH
Confidence 456678888999999999888899888888876 367889999999999999999999999999999999999987765
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Q 012159 279 GIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSW 358 (470)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 358 (470)
.++..+.....++++++.++ +++ .+....++++++|+|.+|...+..++..........+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~----~~~----------------~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~ 227 (382)
T PRK11128 168 VASMLLGQLLRPTIMPQGES----RQQ----------------ESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGF 227 (382)
T ss_pred HHHHHHHHHccCCCCCcccc----ccc----------------cccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHH
Confidence 54444333332222111000 000 0001235688999999999888888877777778888
Q ss_pred HHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch
Q 012159 359 LPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT 407 (470)
Q Consensus 359 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~ 407 (470)
.|.|+++ .|++..+.|.+.....++.++..++.+++.||+++++.+..
T Consensus 228 ~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~ 275 (382)
T PRK11128 228 SAIYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLL 275 (382)
T ss_pred HHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence 8999975 79999999999999999999999999999999999887554
No 71
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.94 E-value=3e-25 Score=218.71 Aligned_cols=345 Identities=18% Similarity=0.238 Sum_probs=273.0
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHH
Q 012159 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (470)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (470)
-|.++...++..+........++.+.+.+.++++.+..+++|+.++......+..++.+.+.||+|.|.+.+++.++.++
T Consensus 44 gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~ 123 (509)
T KOG2504|consen 44 GWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAAL 123 (509)
T ss_pred eeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHH
Confidence 45666666677777666677777888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHH
Q 012159 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (470)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~ 271 (470)
+.++.++..+.+..++...++.|+|.+..+.....++..+|+ ++|+.+.|+...+.++|.++-|.+..++.+.+|||+.
T Consensus 124 g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~ 202 (509)
T KOG2504|consen 124 GLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGA 202 (509)
T ss_pred HHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHH
Confidence 998886655554556666799999999999999999998887 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCCC--------------------CCCccchhhhhh---hhhhhHHhhhc-----c
Q 012159 272 FYIFGLLGIAWFSGFKILQEGETSNGAT--------------------LAPRSNYINMKK---SLSASLEEMGE-----S 323 (470)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~---~~~~~~~~~~~-----~ 323 (470)
+++.+.+.+-.++.....++......+. .....+.....+ ......++..+ .
T Consensus 203 ~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (509)
T KOG2504|consen 203 LLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSP 282 (509)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccc
Confidence 9999998866666655555422221000 000000000000 00000000000 1
Q ss_pred CCCCCH---HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012159 324 LKDVPW---KAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLI 400 (470)
Q Consensus 324 ~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~ 400 (470)
.+.... .+++++|.++.+.+...+...++.....++|.|.. ..|++..+++.+.++.++..++++++.|++.|+..
T Consensus 283 ~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~ 361 (509)
T KOG2504|consen 283 LQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPG 361 (509)
T ss_pred hhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccc
Confidence 111111 58899999999999999999999999999999998 57999999999999999999999999999999988
Q ss_pred hcCCcch---------------------------------------------------------HHHHHHhhhhHHHHHH
Q 012159 401 ATGVETT---------------------------------------------------------MGITNTVGAVPGIVGV 423 (470)
Q Consensus 401 ~~~~~~~---------------------------------------------------------~g~~~~~~~~~~~ig~ 423 (470)
.++.... .|+...+..++.++||
T Consensus 362 ~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gp 441 (509)
T KOG2504|consen 362 IRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGP 441 (509)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCc
Confidence 5443332 9999999999999999
Q ss_pred HHHHHhhccCCceehhhHHHHHHHHHHHHHHHhhc
Q 012159 424 ALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAF 458 (470)
Q Consensus 424 ~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (470)
++.|++.|.++.|...++..+...++.+...+...
T Consensus 442 Piag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 442 PIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred ccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 99999999999999888888777766665554444
No 72
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.94 E-value=2.4e-24 Score=210.77 Aligned_cols=267 Identities=14% Similarity=0.054 Sum_probs=204.1
Q ss_pred HHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhh-----cCcH-HHHHHHHHHHHH
Q 012159 119 TSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF-----GGRK-VLQTGVLIWSLA 192 (470)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----g~r~-~~~~~~~~~~~~ 192 (470)
+...++.+++........+|.+.++.|++.+++|++..+... .+..+++|+++||+ |||| ++.++.++.+++
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 345567777888888889999999999999999999776665 58999999999999 7775 677777777766
Q ss_pred HHHHHHhh--hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcc-cCch
Q 012159 193 TALLPLLA--GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-LGWE 269 (470)
Q Consensus 193 ~~~~~~~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~g~~ 269 (470)
..++++.. .+++.+++..++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+.+. .|||
T Consensus 82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~ 161 (402)
T PRK11902 82 IAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWG 161 (402)
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHH
Confidence 66654432 34567777777888888889999999999999999999999999999999999999999999885 5999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHH
Q 012159 270 SVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGS 349 (470)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 349 (470)
..|++.+++.++..+..+..+|+++.++++ ++.. + + ....+++++++|.++..++..++..
T Consensus 162 ~~f~i~a~~~l~~~l~~~~~~e~~~~~~~~----~~~~---~---~---------~~~~~~~l~~~~~~~~~l~~~~l~~ 222 (402)
T PRK11902 162 NTYLLMAGLMLAGALTTLWAPEPEVPARPP----RSLG---E---A---------VVGPLRDFFSRRGAWALLLLIVLYK 222 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccccccc----chhH---H---H---------HHHHHHHHHhCcCHHHHHHHHHHHH
Confidence 999998887766555555555443221110 0000 0 0 0113567899999888777766666
Q ss_pred HHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcc
Q 012159 350 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPP-LASVLVTSIAAQFADNLIATGVET 406 (470)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~~~~~~~~ 406 (470)
........+.+.++.+.+|+++.+.+++....+ ++.+++.++.+++.||+++|+...
T Consensus 223 ~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~ 280 (402)
T PRK11902 223 LGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLM 280 (402)
T ss_pred hHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 655444455566677778999999998876655 468999999999999999877544
No 73
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.94 E-value=4.4e-26 Score=232.43 Aligned_cols=286 Identities=17% Similarity=0.174 Sum_probs=223.8
Q ss_pred HHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHH
Q 012159 117 GTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (470)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 196 (470)
..+++..+...+........++.+.++|+++..+.|++.+.+.++++++.++.|++.||+|||+++.++.++++++.+++
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~ 115 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLL 115 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHH
Confidence 44555666777777888888999999999999999999999999999999999999999999999999999999999887
Q ss_pred HHhh-------------------------------------------------h-HHHHHHHHHHHHHhhccCchhhHHH
Q 012159 197 PLLA-------------------------------------------------G-FMPGLVLSRVLVGIGEGVSPSAATD 226 (470)
Q Consensus 197 ~~~~-------------------------------------------------~-~~~~l~~~~~l~G~~~~~~~~~~~~ 226 (470)
++.. + .+..++++|+++|+|.+..++...+
T Consensus 116 alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~ 195 (633)
T TIGR00805 116 SLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGIS 195 (633)
T ss_pred hChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCch
Confidence 5431 0 2456789999999999999999999
Q ss_pred HhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhccc----------------------CchHHHHHHHHHHHHHHH
Q 012159 227 LIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL----------------------GWESVFYIFGLLGIAWFS 284 (470)
Q Consensus 227 ~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~----------------------g~~~~~~~~~~~~~~~~~ 284 (470)
++.|++|+++|++++++++.+..+|.++|+++++++.+.+ +|+..|++.+++.++..+
T Consensus 196 ~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v 275 (633)
T TIGR00805 196 YIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSI 275 (633)
T ss_pred hhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999987643 267778888888777666
Q ss_pred HHHhhccCCCCCCCCCC-CccchhhhhhhhhhhHHhhhc--cCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012159 285 GFKILQEGETSNGATLA-PRSNYINMKKSLSASLEEMGE--SLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPT 361 (470)
Q Consensus 285 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 361 (470)
.+++++++.+......+ +..+.....+.......+... ......++.+++||.++...+..++.....+++.+++|.
T Consensus 276 ~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~ 355 (633)
T TIGR00805 276 PFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPK 355 (633)
T ss_pred HHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666655432211100 000000000000000000000 000123568999999999999999999999999999999
Q ss_pred HHHHHhCCCchhhHHHHHHHHH-HHHHHHHHHHHHHHHHHhc
Q 012159 362 YFSEELSLNLTEAAWVSILPPL-ASVLVTSIAAQFADNLIAT 402 (470)
Q Consensus 362 ~~~~~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~~~~ 402 (470)
|+++.+|+++.+++++.....+ +.+++.+++|+++||++.+
T Consensus 356 yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 356 YLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred HHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 9999999999999999888776 5789999999999999854
No 74
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.94 E-value=2e-24 Score=210.68 Aligned_cols=262 Identities=19% Similarity=0.206 Sum_probs=197.3
Q ss_pred HHHHhhhhhHHHhHHhhhhhcC--CCchhhHHHHHH-----HHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHH
Q 012159 124 VICNMDKVNLSVAIIPMSHRFG--WNSSVAGLVQSS-----FFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (470)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~g--~s~~~~~~~~~~-----~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 196 (470)
+...++...++...+.+.+++. .+..+.+.+.+. ..++..+++++.|+++||+|||+++.++.++.+++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 82 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 3456677777777777666654 445555554443 333334688999999999999999999999998888777
Q ss_pred HHhhhHHH--------HHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhh-----
Q 012159 197 PLLAGFMP--------GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII----- 263 (470)
Q Consensus 197 ~~~~~~~~--------~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~----- 263 (470)
+.. +++. .+++.|+++|++.+...+...+++.|++++++|++..++.+.+..+|.+++++++..+.
T Consensus 83 ~~~-~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~ 161 (394)
T TIGR00883 83 GLL-PSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGD 161 (394)
T ss_pred hhC-CChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 543 3322 57889999999999999999999999999999999999999999999999998877654
Q ss_pred ---cccCchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHH--H
Q 012159 264 ---ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKA--V 338 (470)
Q Consensus 264 ---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 338 (470)
+.++||+.|++.+++.++........+|+++.+..+. +++....++++.+++++ +
T Consensus 162 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~ 221 (394)
T TIGR00883 162 DALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQE--------------------KHKKKRGPIRETLTKHRKPF 221 (394)
T ss_pred HHhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHh--------------------ccccccCCHHHHHHhchHHH
Confidence 3578999999877766555444434443322111000 00111234566666655 7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 012159 339 WAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVET 406 (470)
Q Consensus 339 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~ 406 (470)
+...+..++.....+....++|.|+++.+|.++.+.+.......++..++.++.|++.||+++|+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~ 289 (394)
T TIGR00883 222 LLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLI 289 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHH
Confidence 77777777777777888899999998888999999999999999999999999999999999988554
No 75
>TIGR00898 2A0119 cation transport protein.
Probab=99.94 E-value=1.5e-24 Score=218.84 Aligned_cols=285 Identities=19% Similarity=0.164 Sum_probs=214.1
Q ss_pred HhHHhhhhhcCCC---chhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 012159 135 VAIIPMSHRFGWN---SSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRV 211 (470)
Q Consensus 135 ~~~~~~~~~~g~s---~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 211 (470)
...+.+.++++++ ..+.+++.+++.++..++.+++|+++||+|||++++++.++.+++.++.+ ..++++.+++.|+
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~r~ 188 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTA-FSPNYTVFLVFRL 188 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHH-HcccHHHHHHHHH
Confidence 4667899999999 89999999999999999999999999999999999999998888887774 5677799999999
Q ss_pred HHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHHHHHhhcc
Q 012159 212 LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQE 291 (470)
Q Consensus 212 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 291 (470)
+.|++.+...+...+++.|++|+++|+++.++...+..+|.+++|.+++.+.+ ||+.|++.++..++..+..++++|
T Consensus 189 l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~~~~~e 265 (505)
T TIGR00898 189 LVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLSWFVPE 265 (505)
T ss_pred HHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999998877653 999999999888777777777777
Q ss_pred CCCCCCCCCCCccchhhhhhh-----------h-hhh-HHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Q 012159 292 GETSNGATLAPRSNYINMKKS-----------L-SAS-LEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSW 358 (470)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~-----------~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 358 (470)
+++....+.+.++.....++. . ... .++..+..+..++++++++|.++...+..++..+........
T Consensus 266 sp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (505)
T TIGR00898 266 SPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYG 345 (505)
T ss_pred ChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 654321111111100000000 0 000 001111122356789999999888777666555554444333
Q ss_pred HHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch-------------------------------
Q 012159 359 LPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT------------------------------- 407 (470)
Q Consensus 359 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~------------------------------- 407 (470)
++.+.. .++.+.. ......++..+++.++.+++.||+|+|+.+..
T Consensus 346 ~~~~~~-~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 421 (505)
T TIGR00898 346 LVLDLG-NLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGK 421 (505)
T ss_pred Hhcccc-ccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Confidence 444443 3454432 34455677888899999999999999876554
Q ss_pred --------------------------HHHHHHhhhhHHHHHHHHHH
Q 012159 408 --------------------------MGITNTVGAVPGIVGVALTG 427 (470)
Q Consensus 408 --------------------------~g~~~~~~~~~~~ig~~~~g 427 (470)
+|+.+..+.+|++++|.+.+
T Consensus 422 ~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~ 467 (505)
T TIGR00898 422 FGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY 467 (505)
T ss_pred HHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH
Confidence 78888889999999999988
No 76
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.93 E-value=5.9e-24 Score=209.26 Aligned_cols=324 Identities=12% Similarity=0.036 Sum_probs=214.0
Q ss_pred HHHHHHHHHHhhhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHH
Q 012159 118 TTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (470)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 196 (470)
.+.+.+++..+......+++|. +.+++|+++.++|++.+++.++..++++++|+++||+|||++++++..+.+++....
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~ 93 (420)
T PRK09528 14 IFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPF 93 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 3344555555555666667666 555699999999999999999999999999999999999999988766655443322
Q ss_pred HHh--h-----hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCch
Q 012159 197 PLL--A-----GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE 269 (470)
Q Consensus 197 ~~~--~-----~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~ 269 (470)
... . ..+...++.+++.|.+.....+....+..+ . .++++..+|......++|..++|++++.+.+. +|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~ 170 (420)
T PRK09528 94 FIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFNI-NPQ 170 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHhc-Cch
Confidence 111 1 111112333444444444444444444332 2 24677888999999999999999999998764 899
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHH
Q 012159 270 SVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGS 349 (470)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 349 (470)
+.|++.+++.++..+..+..+++++++....+++++ .++..+....+..+|+|.+|.+.+..++..
T Consensus 171 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~ 236 (420)
T PRK09528 171 INFWLGSGSALILLVLLFFAKPDAPSTAKVANALGA--------------NASAVSLKDALALLKLPKFWFLVLYVIGVA 236 (420)
T ss_pred HhHHHHHHHHHHHHHHHhcccccccchhhhccchhc--------------ccccccHHHHHHHccCCCeEeehHHHHHHH
Confidence 999998887776665555554433221110000000 000001112356788888877666555555
Q ss_pred HHHHHHHHHHHHHHHHHh---CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch-------------------
Q 012159 350 WGHYTCLSWLPTYFSEEL---SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT------------------- 407 (470)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~---g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~------------------- 407 (470)
........+.|.|+.+.+ +.+..+.+.+.++..++..++.++.|++.||+++|+....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~ 316 (420)
T PRK09528 237 CFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPL 316 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHH
Confidence 555556667788776543 4566778888999999999999999999999999987654
Q ss_pred ------------------------------------HHH-HHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHHHHHHH
Q 012159 408 ------------------------------------MGI-TNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLT 450 (470)
Q Consensus 408 ------------------------------------~g~-~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 450 (470)
.+. .+....+|.++++.+.|++.|..+ +...+...+++.++.
T Consensus 317 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G-~~~~f~~~~~~~~i~ 395 (420)
T PRK09528 317 EVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIG-FQGTYLILGGIVLLF 395 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhC-chHHHHHHHHHHHHH
Confidence 111 345567899999999999999876 666666655555444
Q ss_pred HHHHHhhcc
Q 012159 451 GTIVWLAFA 459 (470)
Q Consensus 451 ~~~~~~~~~ 459 (470)
....+...+
T Consensus 396 ~~~~~~~~~ 404 (420)
T PRK09528 396 TLISVFTLS 404 (420)
T ss_pred HHHHHHHhc
Confidence 444443333
No 77
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.93 E-value=1.3e-23 Score=208.19 Aligned_cols=318 Identities=18% Similarity=0.159 Sum_probs=249.9
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHH
Q 012159 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (470)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (470)
+.+..++++.+++.++..+.....+.+..+..-|+..++++.++..+...+.++++|.++||++||++++.+-++.++..
T Consensus 10 ~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~ 89 (524)
T PF05977_consen 10 RNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVA 89 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Confidence 44455667778888888888888888877888899999999999999999999999999999999999999987776655
Q ss_pred HHHHHhh----hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCch
Q 012159 194 ALLPLLA----GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE 269 (470)
Q Consensus 194 ~~~~~~~----~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~ 269 (470)
++++... .+.+.+++..++.|++.+...|+.++++.+..|+++...+.++.+...+++.++||.++|.+...+|-.
T Consensus 90 ~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~ 169 (524)
T PF05977_consen 90 LLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAA 169 (524)
T ss_pred HHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHH
Confidence 4443321 346788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHH
Q 012159 270 SVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGS 349 (470)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 349 (470)
++|++.++..++.+......+++.++++. +++... + + -...++.+.++|.+....+..++.+
T Consensus 170 ~~f~inalsfl~~i~~l~~~~~~~~~~~~---~~e~~~---~-------~-----l~~G~ryv~~~~~l~~~l~~~~~~~ 231 (524)
T PF05977_consen 170 AAFLINALSFLISILALLRWKPPPPPSSL---PRERFF---S-------A-----LREGLRYVRSSPPLRSVLLRSFLFN 231 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHcccccccccc---chhhhh---h-------h-----HHHHHHHHhcchHHHHHHHHHHHHH
Confidence 99999887766655554444432221111 111100 0 0 0113456667787777766666666
Q ss_pred HHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch----------------------
Q 012159 350 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT---------------------- 407 (470)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~---------------------- 407 (470)
+....+...+|.+.++.+|.++...|++.+..++++++|.++.+++.+|+++++....
T Consensus 232 l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~ 311 (524)
T PF05977_consen 232 LFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLAL 311 (524)
T ss_pred HhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHH
Confidence 6666777889999999999999999999999999999999999999999887766553
Q ss_pred ---------------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHHHHHHH
Q 012159 408 ---------------------------------MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLT 450 (470)
Q Consensus 408 ---------------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 450 (470)
++++.++...+..+|.++.|.+.+..+... .+.+.++..++.
T Consensus 312 ~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~-al~~a~~~lll~ 386 (524)
T PF05977_consen 312 IALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRT-ALLIAGAALLLS 386 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH-HHHHHHHHHHHH
Confidence 778888888899999999999999877544 333433333333
No 78
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.93 E-value=3.4e-23 Score=202.32 Aligned_cols=317 Identities=12% Similarity=0.043 Sum_probs=225.9
Q ss_pred HHHHHHHHHHHHhhhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHH
Q 012159 116 IGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATA 194 (470)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 194 (470)
++.+....++.+.....+.+++|. +.+++|.+..+.|++.+++.++..++++++|+++||+|||+.++.+....+++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~ 83 (396)
T TIGR00882 4 FWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFA 83 (396)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 445555667777777778888777 4567899999999999999999999999999999999999999887666554433
Q ss_pred HHHH--h-----hhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccC
Q 012159 195 LLPL--L-----AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG 267 (470)
Q Consensus 195 ~~~~--~-----~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 267 (470)
.... . .+.+..+++.+++.|++.+...+....+..+.. ++++..+|......++|.++||++++.+.+ .+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~ 160 (396)
T TIGR00882 84 PFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-ID 160 (396)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cC
Confidence 2211 1 122334566788889988888888888877753 334567788888899999999999998865 59
Q ss_pred chHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHH
Q 012159 268 WESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFC 347 (470)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 347 (470)
|+..|++.+++.++..+..+...++++++++.. +..+ ..+++.+..++++++|||.+|...+..++
T Consensus 161 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------------~~~~~~~~~~~~~~l~~~~~~~~~l~~~~ 226 (396)
T TIGR00882 161 PQIVFWLGSGFALILMLLLMFAKPKAPSSATVA-NALG-------------ANASAFSLKLALELFRQRKFWMFVLYVVG 226 (396)
T ss_pred chHHHHHHHHHHHHHHHHHHHhCCCCchhhhhh-cccc-------------cccCCCCHHHHHHHHcCCcHHHHHHHHHH
Confidence 999999988887766555544443322111100 0000 00001111235788899998887777766
Q ss_pred HHHHHHHHHHHHHHHHHHHh---CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch-----------------
Q 012159 348 GSWGHYTCLSWLPTYFSEEL---SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT----------------- 407 (470)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~---g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~----------------- 407 (470)
....+.....+.+.|+++.+ +.+....+.+.+...+...++.+..+++.||+++|+....
T Consensus 227 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~ 306 (396)
T TIGR00882 227 VACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATT 306 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCC
Confidence 66666666677888888765 4556677888888889999999999999999999987654
Q ss_pred --------------------------------------HHH-HHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHHHHH
Q 012159 408 --------------------------------------MGI-TNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFY 448 (470)
Q Consensus 408 --------------------------------------~g~-~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~ 448 (470)
.+. .+....+++++++.+.|++.|..+ +...+.+.+++.+
T Consensus 307 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G-~~~~f~~~~~~~~ 385 (396)
T TIGR00882 307 ALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIG-FQGAYLVLGCIVL 385 (396)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcc-cHHHHHHHHHHHH
Confidence 122 455677889999999999998765 5555555444444
Q ss_pred HH
Q 012159 449 LT 450 (470)
Q Consensus 449 ~~ 450 (470)
+.
T Consensus 386 i~ 387 (396)
T TIGR00882 386 LF 387 (396)
T ss_pred HH
Confidence 33
No 79
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.93 E-value=1.7e-23 Score=230.66 Aligned_cols=273 Identities=16% Similarity=0.096 Sum_probs=200.3
Q ss_pred HHHHHHHHHHHHHhhhhhHHHhHH-hhhhhcCCC-chhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHH--HHHHHH
Q 012159 115 LIGTTSLAFVICNMDKVNLSVAII-PMSHRFGWN-SSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQT--GVLIWS 190 (470)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~s-~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~--~~~~~~ 190 (470)
++...++..+...+....+..... .+..+.+.+ ....++..+++.++++++++++|+++||+|||+++.. ...+..
T Consensus 16 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~ 95 (1140)
T PRK06814 16 LFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGI 95 (1140)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHH
Confidence 333334444443443333333332 343444333 2457888999999999999999999999999997643 222222
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchH
Q 012159 191 LATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWES 270 (470)
Q Consensus 191 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~ 270 (470)
....+.++..++++.++++|+++|++.+...|+..+++.+++++++|++++|+.+++.++|.++||+++|++.+..+|++
T Consensus 96 ~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~ 175 (1140)
T PRK06814 96 AALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVI 175 (1140)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHH
Confidence 22223333446789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHH
Q 012159 271 VFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSW 350 (470)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 350 (470)
.|+..+++.++.+++.+.++++++....... ..... +. . ...++.+.+++.+|...+..++.++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~----~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (1140)
T PRK06814 176 LVALLMGIAVLGWLASLFIPKTGNAAPDLKI-DRNII---RS----T--------ITLLKYAKADKRIWLAILGISWFWL 239 (1140)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCCCCCCCee-ccchH---HH----H--------HHHHHHHhcCchHHHHHHHHHHHHH
Confidence 9955555555555555555554332111110 00000 00 0 0135678899999999998888888
Q ss_pred HHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 012159 351 GHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (470)
Q Consensus 351 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~ 403 (470)
....+..++|.|+++.+|.++...|++.+...++.+++.++.|++.++..+++
T Consensus 240 ~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~ 292 (1140)
T PRK06814 240 VGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLL 292 (1140)
T ss_pred HHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeee
Confidence 88888899999999999999999999999999999999999999997765443
No 80
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.92 E-value=9.2e-25 Score=198.34 Aligned_cols=292 Identities=15% Similarity=0.146 Sum_probs=242.2
Q ss_pred hhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCc
Q 012159 141 SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS 220 (470)
Q Consensus 141 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~ 220 (470)
..+.+-+..++|++++...+...+.+++.|.+.||+|+|..+++|+.++...+++++ +.++++.+++.|.++|+|.+..
T Consensus 98 ~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFa-fg~sy~~l~vAR~LQgvgsA~~ 176 (464)
T KOG3764|consen 98 AISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFA-FGNSYPMLFVARSLQGVGSAFA 176 (464)
T ss_pred ccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHH-HcchhHHHHHHHHHhhhhHHHH
Confidence 345567888999999999999999999999999999999999999999999998885 6777899999999999999999
Q ss_pred hhhHHHHhhhccCcc-chhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 012159 221 PSAATDLIARSIPLE-ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGAT 299 (470)
Q Consensus 221 ~~~~~~~i~~~~~~~-~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (470)
.+...++++|.+|++ +|++++|+.-.+.++|-.+||++||.+++..|.+.+|++.++++++-..+.+++.++.+.+...
T Consensus 177 ~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~ 256 (464)
T KOG3764|consen 177 DTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPDS 256 (464)
T ss_pred HhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCccc
Confidence 999999999999876 4799999999999999999999999999999999999999999988877777766554333211
Q ss_pred CCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHH
Q 012159 300 LAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSI 379 (470)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~ 379 (470)
..+..++.+++++|.++.........+.........++.+..+.+..+..+.|+.+.
T Consensus 257 -----------------------~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fL 313 (464)
T KOG3764|consen 257 -----------------------TEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFL 313 (464)
T ss_pred -----------------------cccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeec
Confidence 111345789999999999988888888888888899999999988866668999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcch----------------------------------------------------
Q 012159 380 LPPLASVLVTSIAAQFADNLIATGVETT---------------------------------------------------- 407 (470)
Q Consensus 380 ~~~~~~~~~~~~~g~l~dr~~~~~~~~~---------------------------------------------------- 407 (470)
...+...++..+.|.+.||++..+.+..
T Consensus 314 p~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~r 393 (464)
T KOG3764|consen 314 PASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPR 393 (464)
T ss_pred ccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchh
Confidence 9999999999999999999995443332
Q ss_pred -----------HHHHHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHHHHHHHHHHHHhh
Q 012159 408 -----------MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLA 457 (470)
Q Consensus 408 -----------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (470)
.++......++.++||.++|.+.+..|.-+ ...+.++..+.-+.++.+.
T Consensus 394 h~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~w-l~~iig~~n~iyapvl~ll 453 (464)
T KOG3764|consen 394 HVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEW-LMTIIGILNLIYAPVLLLL 453 (464)
T ss_pred hccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHH-HHHHHHHHHHHHHHHHHHH
Confidence 566667777888889999998888776433 3333344444444444433
No 81
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.92 E-value=1.5e-22 Score=194.99 Aligned_cols=253 Identities=14% Similarity=0.095 Sum_probs=192.0
Q ss_pred hhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhh-----cCcHHH-HHHHHHHHHHHHHHHHhh--hH
Q 012159 131 VNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF-----GGRKVL-QTGVLIWSLATALLPLLA--GF 202 (470)
Q Consensus 131 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----g~r~~~-~~~~~~~~~~~~~~~~~~--~~ 202 (470)
...++..|.+.+++|++.+++|+..+. .+...+ .+++|+++||+ ||||.+ +.+.++.++....+++.. .+
T Consensus 5 ~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~ 82 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTD 82 (356)
T ss_pred hhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchh
Confidence 456677899999999999999999765 555554 89999999998 898874 556666666655554332 34
Q ss_pred HHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccC--------chHHHHH
Q 012159 203 MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG--------WESVFYI 274 (470)
Q Consensus 203 ~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g--------~~~~~~~ 274 (470)
.+.+....++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+.++.| ||..|++
T Consensus 83 l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i 162 (356)
T TIGR00901 83 LPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFW 162 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHH
Confidence 45667777788888888899999999999999999999999999999999999999999998888 9999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHH---HHHHHHHHHHHHHH
Q 012159 275 FGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKA---VWAMIYAHFCGSWG 351 (470)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~ 351 (470)
.+++.++..+..++..+++.+.+.. ++++ .+ + ....+++++++|. ++...+..++...+
T Consensus 163 ~ai~~l~~~~~~~~~~~e~~~~~~~--~~~~----~~---~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (356)
T TIGR00901 163 TALLILPGLLVTLFLAKEPQEDASV--PKPL----TQ---A---------VLKPIREFFQRKNMIQALLLLLLIVLYKLG 224 (356)
T ss_pred HHHHHHHHHHHHHHhccCCCccccc--chhH----HH---H---------HHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 8887766555544433222111100 0000 00 0 0112456666664 77777777777888
Q ss_pred HHHHHHHHHHHHHHHhCCCchhhHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCC
Q 012159 352 HYTCLSWLPTYFSEELSLNLTEAAWVSILPP-LASVLVTSIAAQFADNLIATGV 404 (470)
Q Consensus 352 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~~~~~~ 404 (470)
.+....+.|.|+++ +|+++.+.+.+....+ ++.+++.+++|++.||+++|+.
T Consensus 225 ~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~ 277 (356)
T TIGR00901 225 DSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYA 277 (356)
T ss_pred HHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 88889999999987 8999999998887666 5788999999999999998874
No 82
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.92 E-value=2.4e-22 Score=196.87 Aligned_cols=321 Identities=11% Similarity=0.050 Sum_probs=223.9
Q ss_pred HHHHHHHHHhhhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcC-cHHHHHHHHHHHHHHHHH
Q 012159 119 TSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGG-RKVLQTGVLIWSLATALL 196 (470)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~-r~~~~~~~~~~~~~~~~~ 196 (470)
+++.+++.+.......+.++. +.+++|++..++|++.+++.++..++++++|+++||+|+ |+++.++.++.++...+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~ 86 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFA 86 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 445566666666666555444 667899999999999999999999999999999999965 777777777776666555
Q ss_pred HHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhc--------cCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCc
Q 012159 197 PLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARS--------IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 268 (470)
Q Consensus 197 ~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~--------~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~ 268 (470)
. ..++++.+++.+++.|++.+...+...++.... .....|.+.+| .+|.++||.+++.+....+|
T Consensus 87 ~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~ 159 (418)
T TIGR00889 87 A-QVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSN 159 (418)
T ss_pred H-HhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchh
Confidence 4 456668888899999998877777666654322 22223444443 47889999999887332234
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHH
Q 012159 269 ESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCG 348 (470)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 348 (470)
. +|++.+++.++..+..+.++|+++.++++ +.... + ......+.++|+|.++.+.+..++.
T Consensus 160 ~-~f~~~~~~~~~~~~~~~~~~e~~~~~~~~---~~~~~-----------~----~~~~~~~~~~k~~~~~~~~~~~~~~ 220 (418)
T TIGR00889 160 I-QLYITAGSSALLGVFALTLPDIPVAKSTA---KMSIK-----------V----MLGLDAFILFKNKRMAIFFFFSMLL 220 (418)
T ss_pred H-HHHHHHHHHHHHHHHHhcCCCCCCCcccc---ccCHH-----------H----HhhhhHHHHhcCCCeeeHHHHHHHH
Confidence 4 46666666555555555555442211110 00000 0 0011235678899988888888877
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCc--------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch-------------
Q 012159 349 SWGHYTCLSWLPTYFSEELSLNL--------TEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT------------- 407 (470)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~g~s~--------~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~------------- 407 (470)
.........+.+.|+++ .|.++ ...+...++..+..+++.++.|++.||+++|+.+..
T Consensus 221 ~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~ 299 (418)
T TIGR00889 221 GAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFA 299 (418)
T ss_pred HhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 77666677888888875 46443 566888999999999999999999999999866543
Q ss_pred ----------------------------------------------HHHHH-HhhhhHHHHHHHHHHHhhccCCc-----
Q 012159 408 ----------------------------------------------MGITN-TVGAVPGIVGVALTGYLLDSTHS----- 435 (470)
Q Consensus 408 ----------------------------------------------~g~~~-~~~~~~~~ig~~~~g~l~~~~~~----- 435 (470)
.|+.+ ....++.++||.+.|++.+..+.
T Consensus 300 ~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~ 379 (418)
T TIGR00889 300 YGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFD 379 (418)
T ss_pred HcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCc
Confidence 66665 45678999999999999998643
Q ss_pred eehhhHHHHHHHHHHHHHHHhhccCCCCCCC
Q 012159 436 WSMSLFAPSIFFYLTGTIVWLAFASSKPQNF 466 (470)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (470)
|...+.+.+++.++.+...+...++..++-.
T Consensus 380 ~~~~f~~~~~~~~i~~~l~~~~~~~~~~~~~ 410 (418)
T TIGR00889 380 WQTMWLFFAGYIAILAVLFMIFFKYSHNAIK 410 (418)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 6667777766667777777777777666643
No 83
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.92 E-value=3.6e-22 Score=220.99 Aligned_cols=273 Identities=16% Similarity=0.135 Sum_probs=198.6
Q ss_pred HHHHHHH-hhhhhHHHhHHhhhhhcCCCc--hhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHH
Q 012159 121 LAFVICN-MDKVNLSVAIIPMSHRFGWNS--SVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP 197 (470)
Q Consensus 121 ~~~~~~~-~~~~~~~~~~~~~~~~~g~s~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 197 (470)
+..++.. .+........+.+..+++.+. ...+++.+++.+++.++++++|+++||+|||++++++.++.++..++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~ 95 (1146)
T PRK08633 16 LTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIV 95 (1146)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHH
Confidence 3444433 333344444555656666544 4478999999999999999999999999999999988766555544332
Q ss_pred --HhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcc--------c-
Q 012159 198 --LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN--------L- 266 (470)
Q Consensus 198 --~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~--------~- 266 (470)
...++++.++++|++.|++.+...++..+++.+++++++|++++|+...+..+|.++|+++++++.+. +
T Consensus 96 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~ 175 (1146)
T PRK08633 96 LAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEIL 175 (1146)
T ss_pred HHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccc
Confidence 23456789999999999999999999999999999999999999999999999999999999999876 2
Q ss_pred CchHHHHHHHHHH-HHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHH
Q 012159 267 GWESVFYIFGLLG-IAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAH 345 (470)
Q Consensus 267 g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 345 (470)
+|.+.+.+.++.. ++.++..+.+++.++...... +...... ..+ ....++.+++++.++...+..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------~~~-----~~~~~~~l~~~~~~~~~~~~~ 241 (1146)
T PRK08633 176 GRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVF-DKKKYLF--------PKL-----LWRNLKLLRSDRVLWLAIIGL 241 (1146)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccc-ccccccc--------HHH-----HHHHHHHHhcCcHHHHHHHHH
Confidence 3444444433333 333333444444332211110 0000000 000 011346778889888888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch
Q 012159 346 FCGSWGHYTCLSWLPTYFSEELSLNLT-EAAWVSILPPLASVLVTSIAAQFADNLIATGVETT 407 (470)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~g~s~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~ 407 (470)
++..........++|.|+++.+|++.. ..+++.+...++.+++.++.+++.||+++++....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~ 304 (1146)
T PRK08633 242 SYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPL 304 (1146)
T ss_pred HHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhH
Confidence 777777778888999999998999998 99999999999999999999999999988765543
No 84
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.91 E-value=1.2e-21 Score=190.88 Aligned_cols=268 Identities=10% Similarity=0.017 Sum_probs=201.7
Q ss_pred HHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHH--HHHHHHHHHHhhhhhHH-HhhhhcCcHHHHHHHHHH-HH
Q 012159 116 IGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLV--QSSFFWGYALSQLPGGW-LAKIFGGRKVLQTGVLIW-SL 191 (470)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~--~~~~~~~~~~~~~~~g~-l~dr~g~r~~~~~~~~~~-~~ 191 (470)
+..++..++.+++......+.+|.+.++.|.+..++|++ .++..+...+.+++++. ..||+||||..++...+. ++
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~ 82 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSA 82 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHH
Confidence 456667788888988999999999999999999999997 46667888788888844 789999999876554332 21
Q ss_pred HHHHHHHh--h-hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCc
Q 012159 192 ATALLPLL--A-GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 268 (470)
Q Consensus 192 ~~~~~~~~--~-~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~ 268 (470)
....++.. . .....++...++.+++.+...+...++..+..++++++...+....+..+|.++|+.+.+++.+++||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw 162 (390)
T TIGR02718 83 CLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQ 162 (390)
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 22222211 1 21233445556666777788888888989998888889888889888899999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHH
Q 012159 269 ESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCG 348 (470)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 348 (470)
|..|++.+++.++..+..++++++++++++. +.+ +..++++.+|+|.++...+..++.
T Consensus 163 ~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~~~~~~~l~~~~~~~~~~~~~l~ 220 (390)
T TIGR02718 163 RPAFLLVACVPLASLVCVLWLKDRAVASPEA---PLA-------------------RRASLFRFFRRPLAWSLLALALLS 220 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcCcccc---chh-------------------hHHHHHHHHcCcCHHHHHHHHHHH
Confidence 9999999988776666555554433211100 000 011356788999988888888888
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCcc
Q 012159 349 SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPL-ASVLVTSIAAQFADNLIATGVET 406 (470)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~~~~~~~~ 406 (470)
..+......+.+.|+++ .|+++++.|++.....+ ..+++.++.|++.||+++++...
T Consensus 221 ~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~ 278 (390)
T TIGR02718 221 AMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFI 278 (390)
T ss_pred HHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 88888888899999987 69999999998888765 66677899999999999886544
No 85
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.89 E-value=3.4e-20 Score=184.31 Aligned_cols=288 Identities=13% Similarity=0.097 Sum_probs=196.9
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHhHHhhh-hh--cCCCchhhHHHHHHHHHHHHHhhhhhHHHhhh-hcCcHHHHHHHHHH
Q 012159 114 KLIGTTSLAFVICNMDKVNLSVAIIPMS-HR--FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQTGVLIW 189 (470)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~ 189 (470)
+.+..+++..++..+..+...+.+|.+. ++ +|++..+.+++.+.+.++..++++++|+++|| +|||+++.++.++.
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~ 89 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVL 89 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHH
Confidence 3445555666676777777777777754 44 89999999999999999999999999999999 89999999999999
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccc---hhhHHHHHHhhhhhHHHHHHhhHHhhhccc
Q 012159 190 SLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEE---RSRAVSFVFGGLSFGSVAGLLLAPPIIENL 266 (470)
Q Consensus 190 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 266 (470)
+++.++++ ..++.+.+++.+++.|++.|...+...+++++++|+++ |++++++++.+.++|.++||++++++.+++
T Consensus 90 ~~g~~~~~-~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~ 168 (475)
T TIGR00924 90 MLGHFMLA-MSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENY 168 (475)
T ss_pred HHHHHHHH-hcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99887775 44555778889999999999999999999999998754 888999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCC---CCccchhhhhhh---------------hhhhHH----------
Q 012159 267 GWESVFYIFGLLGIAWFSGFKILQEGETSNGATL---APRSNYINMKKS---------------LSASLE---------- 318 (470)
Q Consensus 267 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---------------~~~~~~---------- 318 (470)
||++.|++.++..++..+.++..++..++.+.+. .++++....... ..+...
T Consensus 169 g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (475)
T TIGR00924 169 GYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTL 248 (475)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 9999999988665555444444332221111100 000000000000 000000
Q ss_pred ------hhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchh----hHHHHHHHHHHHHHH
Q 012159 319 ------EMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTE----AAWVSILPPLASVLV 388 (470)
Q Consensus 319 ------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~----~~~~~~~~~~~~~~~ 388 (470)
......+.....+..|...+..+.+...+++..+....+.++.+.++..+.+... .+++.++..+..++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~ 328 (475)
T TIGR00924 249 AVIIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVG 328 (475)
T ss_pred HHHHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHH
Confidence 0000000111111122234555566666677777777788888887654443222 567788888888877
Q ss_pred HHHHHHHHHHHHhc
Q 012159 389 TSIAAQFADNLIAT 402 (470)
Q Consensus 389 ~~~~g~l~dr~~~~ 402 (470)
..+..++..|+.+|
T Consensus 329 ~p~~~~~~~~l~~~ 342 (475)
T TIGR00924 329 SPVLAMIWTRLGRK 342 (475)
T ss_pred HHHHHHHHHHHHhC
Confidence 77766655555553
No 86
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.89 E-value=3.4e-20 Score=184.32 Aligned_cols=287 Identities=13% Similarity=0.148 Sum_probs=190.9
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHhH-HhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhh-hcCcHHHHHHHHHHHH
Q 012159 114 KLIGTTSLAFVICNMDKVNLSVAI-IPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQTGVLIWSL 191 (470)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~ 191 (470)
+-++.+++..+...+..+.....+ .++.+++|++..+.+++.+.+.....+..+++|+++|| +|||++++++.+++++
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~ 93 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAI 93 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHH
Confidence 444555555566666666555554 44678899999999999999998888999999999999 9999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCcc--chhhHHHHHHhhhhhHHHHHHhhHHhhhcccCch
Q 012159 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE--ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE 269 (470)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~ 269 (470)
+.+++++..+....+++.|+++|+|.|...|...+++.|.+|++ +|++++++++.+.++|.++||.+++++.+++|||
T Consensus 94 g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~ 173 (489)
T PRK10207 94 GYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYS 173 (489)
T ss_pred HHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChH
Confidence 99887644333344668899999999999999999999999877 4578999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCC-ccchhhh--------------hhhhhh-hHHh--------------
Q 012159 270 SVFYIFGLLGIAWFSGFKILQEGETSNGATLAP-RSNYINM--------------KKSLSA-SLEE-------------- 319 (470)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------------~~~~~~-~~~~-------------- 319 (470)
+.|++.++..++.++.+...++..++...+..+ +.+.... ...... ....
T Consensus 174 ~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f 253 (489)
T PRK10207 174 VTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIF 253 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 999997654444443433333221111000000 0000000 000000 0000
Q ss_pred hhccCCCCCHHHHhcCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhCCCc----hhhHHHHHHHHHHHHHHHHHHH
Q 012159 320 MGESLKDVPWKAIFRSKAVWAMIY--AHFCGSWGHYTCLSWLPTYFSEELSLNL----TEAAWVSILPPLASVLVTSIAA 393 (470)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~g~s~----~~~~~~~~~~~~~~~~~~~~~g 393 (470)
..+..+ . .+.+|+|.+....+ ...+....+......++.+.++..+.+. .....+.....+..++...+.+
T Consensus 254 ~~~~~~-~--~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~ 330 (489)
T PRK10207 254 FREAFK-L--DKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILA 330 (489)
T ss_pred HHHHhc-C--CHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHH
Confidence 000000 0 14556665544332 2444555556666778888875333211 1223455556667777888889
Q ss_pred HHHHHHHhcC
Q 012159 394 QFADNLIATG 403 (470)
Q Consensus 394 ~l~dr~~~~~ 403 (470)
++.||+++|+
T Consensus 331 ~l~~rl~~r~ 340 (489)
T PRK10207 331 GIYTHLGSKG 340 (489)
T ss_pred HHHHHHhhCC
Confidence 9999999886
No 87
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.89 E-value=2.3e-20 Score=177.23 Aligned_cols=278 Identities=13% Similarity=0.010 Sum_probs=202.7
Q ss_pred HHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchh-hHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHH
Q 012159 117 GTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSV-AGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATAL 195 (470)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 195 (470)
..+|+..|+. -.+...+...|.+.+++|++..+ .|.+.+++..+++++.++.|+++||+|.|+++.++.+.+++..++
T Consensus 30 ~~lC~fGF~~-e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L 108 (511)
T TIGR00806 30 LYLCFYGFMA-QFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLL 108 (511)
T ss_pred HHHHHHHHHH-HhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 3344433333 34677888899999999999999 999999999999999999999999999999999999999999988
Q ss_pred HHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHH
Q 012159 196 LPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIF 275 (470)
Q Consensus 196 ~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~ 275 (470)
++ +.+++..+.+.|++.|++.|... +...++..|+|+++|+++.|+...+..+|.+++++++++ ...+|||+-+.+.
T Consensus 109 ~~-fa~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln 185 (511)
T TIGR00806 109 LL-LGTSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLN 185 (511)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHH
Confidence 86 46667999999999999999999 999999999999999999999999999999999999999 5567998755443
Q ss_pred ---HHHHHHHHHHHHhhccCCCCCC--CCC-CC-----ccchhhhhhhhhhhHHhhh-c-----cCCCCCHHHHhcCHHH
Q 012159 276 ---GLLGIAWFSGFKILQEGETSNG--ATL-AP-----RSNYINMKKSLSASLEEMG-E-----SLKDVPWKAIFRSKAV 338 (470)
Q Consensus 276 ---~~~~~~~~~~~~~~~~~~~~~~--~~~-~~-----~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~ 338 (470)
.....+.+++.+++|.+++.-- +.. .+ +.+....... .......+ + ..-...++...+||.+
T Consensus 186 ~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~v 264 (511)
T TIGR00806 186 IISLVFMTFSVFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPG-GKLEDYLGTCRDSFLVRMLSELVTIYRNPQL 264 (511)
T ss_pred HHHHHHHHHHHHHHHhCCCCchhhhhccccccccccccccccCCCCCc-cccchhhhhhhhHHHHHHHHHHHHHhcCcch
Confidence 2223455666677775443210 000 00 0000000000 00000000 0 0001224566788988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012159 339 WAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL 399 (470)
Q Consensus 339 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 399 (470)
....+...+...+++.+..|......+.-+-.+...|..-++..+.+.+..+..|++-.++
T Consensus 265 l~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w 325 (511)
T TIGR00806 265 LLWSLWWVFNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRW 325 (511)
T ss_pred hhhhHHHHHHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 8888888888888888888888877654332223567788888888888899998885444
No 88
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.87 E-value=1.8e-20 Score=185.69 Aligned_cols=260 Identities=13% Similarity=0.106 Sum_probs=186.5
Q ss_pred hhhhhHHHh-HHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhh----hcCcH-HHHHHHHHHHHHHHHHHHhhh
Q 012159 128 MDKVNLSVA-IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI----FGGRK-VLQTGVLIWSLATALLPLLAG 201 (470)
Q Consensus 128 ~~~~~~~~~-~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~g~r~-~~~~~~~~~~~~~~~~~~~~~ 201 (470)
.....+..+ .+.+.+++|+++.++|++.++..+..++..++.|+++|| +|||| .++.+...++++.+++...++
T Consensus 13 ~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~ 92 (437)
T TIGR00792 13 FIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPD 92 (437)
T ss_pred HHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCC
Confidence 333444444 555778899999999999999999999999999999998 67744 566777777766665533221
Q ss_pred -----HHHHHHHHHHHHHhhccCchhhHHHHhhhcc-CccchhhHHHHHHhhhhhHHHHHHhhHHhhhc-------ccCc
Q 012159 202 -----FMPGLVLSRVLVGIGEGVSPSAATDLIARSI-PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-------NLGW 268 (470)
Q Consensus 202 -----~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-------~~g~ 268 (470)
....+++.+++.+++.+...+...++..+.. ++++|++..++.+.+..+|..+++.+.+.+.. ..+|
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~ 172 (437)
T TIGR00792 93 FSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGW 172 (437)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccH
Confidence 1345667778888888888788888888887 56899999999998888888877766655542 4589
Q ss_pred hHHHHHHHHHHHHHHHHHH-hhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHH
Q 012159 269 ESVFYIFGLLGIAWFSGFK-ILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFC 347 (470)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 347 (470)
++.+++.+++.++..+..+ ..+|++++.+.. ++++ ......++.+++||.++...+..++
T Consensus 173 ~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~--~~~~-----------------~~~~~~~~~l~~~~~~~~~~~~~~~ 233 (437)
T TIGR00792 173 FMFALVLALIGVVSLIICFFGTKERYSEIPKN--IEKK-----------------LSLKQIFKALFKNDQLLILCLAYLF 233 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCEecCCCCCcc--cccC-----------------CCHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999998888766655443 344332110000 0000 0001134678899999988888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch
Q 012159 348 GSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT 407 (470)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~ 407 (470)
...+......+.+.|.+..++ ++...+.+.....++.+++.++.+++.||+++|+....
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~ 292 (437)
T TIGR00792 234 YNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAG 292 (437)
T ss_pred HHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 877777766666767665555 45566777778889999999999999999998875543
No 89
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.87 E-value=2.5e-19 Score=172.63 Aligned_cols=256 Identities=17% Similarity=0.207 Sum_probs=193.1
Q ss_pred hHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHHHhhccCchhhHHHHh
Q 012159 151 AGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP--LLAGFMPGLVLSRVLVGIGEGVSPSAATDLI 228 (470)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i 228 (470)
.+.+.+++.+|.++|++..|+++||+|||..+.++.++..++.+++. ...+++.+++++|++.|+..|........++
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl 141 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYL 141 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 46688899999999999999999999999999888777666555443 3457788999999999999999999999999
Q ss_pred hhccCccchhhHHHHHHhhhhhHHHHHHhhHH-hhh-cccCchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccc-
Q 012159 229 ARSIPLEERSRAVSFVFGGLSFGSVAGLLLAP-PII-ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSN- 305 (470)
Q Consensus 229 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~-~l~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 305 (470)
.|..|++.||..-.+.+.+..+|..++..++. .+. ....|++.+....+.+++..+...++||+++.--.++.++++
T Consensus 142 ~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A 221 (485)
T KOG0569|consen 142 TEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEA 221 (485)
T ss_pred hhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHH
Confidence 99999999999999999999999999966653 233 334599999999999999999999999998864332221111
Q ss_pred --hhhhhhhh-------hh---h-HHhhhccCCCCCHHHHhcCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHh
Q 012159 306 --YINMKKSL-------SA---S-LEEMGESLKDVPWKAIFRSKAVWAMIYAHFC-----GSWGHYTCLSWLPTYFSEEL 367 (470)
Q Consensus 306 --~~~~~~~~-------~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~ 367 (470)
..+..+.. .. + .++..++.+..++.++++++....-....+. ...+...+..|...++++ .
T Consensus 222 ~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~-a 300 (485)
T KOG0569|consen 222 RKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT-A 300 (485)
T ss_pred HHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH-c
Confidence 11111111 00 0 1111122356778999998766554333222 233334556666666664 6
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch
Q 012159 368 SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT 407 (470)
Q Consensus 368 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~ 407 (470)
|++..++.+.....++..++.++++.++.||+|||..+..
T Consensus 301 G~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~ 340 (485)
T KOG0569|consen 301 GFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLI 340 (485)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHH
Confidence 9999999999999999999999999999999999987776
No 90
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.86 E-value=9.9e-19 Score=172.83 Aligned_cols=282 Identities=17% Similarity=0.181 Sum_probs=200.6
Q ss_pred HHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHh
Q 012159 120 SLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL 199 (470)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 199 (470)
++.....++........++.+..++|-+ ....|+.+...++..++.++.|+++|.+|||.+++.+.++..++.++.+ .
T Consensus 50 ~~~~~~~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~a-t 127 (599)
T PF06609_consen 50 SLAVIAAYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCA-T 127 (599)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhh-c
Confidence 3333334445555566678899999864 6678999999999999999999999999999999999999999998875 6
Q ss_pred hhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHH
Q 012159 200 AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLG 279 (470)
Q Consensus 200 ~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 279 (470)
+++...++.+..+.|+|.|... .....++|..|.|.|+...++..........++|.++..+..+.+|||.|++.+++.
T Consensus 128 A~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~ 206 (599)
T PF06609_consen 128 AQNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWS 206 (599)
T ss_pred CCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHH
Confidence 7777999999999999976665 456668999999999888887777666666688888888777789999999998876
Q ss_pred HHHHHHHHhhccCCCCCC--CC-CCCccchhhhhh--------------------hh-----hhh---------------
Q 012159 280 IAWFSGFKILQEGETSNG--AT-LAPRSNYINMKK--------------------SL-----SAS--------------- 316 (470)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~--------------------~~-----~~~--------------- 316 (470)
.+.++..+++..+++..+ .+ ...++...+.+- .. .+.
T Consensus 207 ~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~ 286 (599)
T PF06609_consen 207 GIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVA 286 (599)
T ss_pred HHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHH
Confidence 665544433333332211 11 111111111110 00 000
Q ss_pred --HHhhh-c-cCCCCCHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCch---hhHHHHHHHHHHHHHH
Q 012159 317 --LEEMG-E-SLKDVPWKAIFRS-KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLT---EAAWVSILPPLASVLV 388 (470)
Q Consensus 317 --~~~~~-~-~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~---~~~~~~~~~~~~~~~~ 388 (470)
.-|.. . +.+..+ .+++|+ |.+...++..++..+.++....+.|......++-++. ..++.....+++..++
T Consensus 287 F~~wE~~~~~~~Pl~P-~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g 365 (599)
T PF06609_consen 287 FVVWEWFGAPKDPLFP-HRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAG 365 (599)
T ss_pred HHHhhhhccCCCCcCC-HHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHH
Confidence 00100 0 111222 467787 5566667777788888888888999988877776653 5678888889999999
Q ss_pred HHHHHHHHHHHHhcCCc
Q 012159 389 TSIAAQFADNLIATGVE 405 (470)
Q Consensus 389 ~~~~g~l~dr~~~~~~~ 405 (470)
..+.|.+..++++.|..
T Consensus 366 ~~i~g~l~~~ir~~Kw~ 382 (599)
T PF06609_consen 366 AVILGLLFSKIRHIKWQ 382 (599)
T ss_pred HHHHHHHHHHccchhHH
Confidence 99999999988877643
No 91
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.86 E-value=1.1e-19 Score=182.87 Aligned_cols=271 Identities=18% Similarity=0.215 Sum_probs=193.0
Q ss_pred hhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhh
Q 012159 150 VAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIA 229 (470)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~ 229 (470)
+.+++.++..++..++++++|+++|++|||+.++++.+++.++.++.+ .+.++..++++|++.|+|.|........+++
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~-~a~~~~~l~~GR~l~G~g~G~~~~~~piy~s 168 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIA-LAPSWYQLIVGRILTGLGVGGASVLAPVYIS 168 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHhccchhhhhhcchhhHh
Confidence 458999999999999999999999999999999999999999998885 6668899999999999999999999999999
Q ss_pred hccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcc-cCchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccch--
Q 012159 230 RSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNY-- 306 (470)
Q Consensus 230 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 306 (470)
|..|++.||...+..+....+|..++..++....+. .+||..+.+..+.+++..+..+++||+++...+..+..+..
T Consensus 169 Eiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~ 248 (513)
T KOG0254|consen 169 EIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRS 248 (513)
T ss_pred hcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHH
Confidence 999999999999999999999999995554444322 48999999988888888777777777766533322111111
Q ss_pred hhhhhh-----hhhhHH--------hhhccCCCCCHHHHhc----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 012159 307 INMKKS-----LSASLE--------EMGESLKDVPWKAIFR----SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSL 369 (470)
Q Consensus 307 ~~~~~~-----~~~~~~--------~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~ 369 (470)
....+. .....+ +.........++++++ ++.++...+..+....+.....+|.+.+++. .|.
T Consensus 249 l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~-~g~ 327 (513)
T KOG0254|consen 249 LKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKS-AGL 327 (513)
T ss_pred HHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHh-cCC
Confidence 000000 000000 0000111112334433 2334445555555555566677788888775 466
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHhhhhHHHHHHHHHHHhh
Q 012159 370 NLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMGITNTVGAVPGIVGVALTGYLL 430 (470)
Q Consensus 370 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~g~~~~~~~~~~~ig~~~~g~l~ 430 (470)
+... .....+.++..+++.+++..+.||+|||+ ....+.++..++..+.+...
T Consensus 328 ~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~-------lll~s~~~m~~~~~~~~~~~ 380 (513)
T KOG0254|consen 328 KSDT-FLASIILGVVNFLGTLVATYLVDRFGRRK-------LLLFGAAGMSICLVILAVVG 380 (513)
T ss_pred CCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHH-------HHHHhHHHHHHHHHHHHHHH
Confidence 6443 55667777888888888899999999996 44455555555555555443
No 92
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.86 E-value=2.5e-20 Score=168.68 Aligned_cols=293 Identities=16% Similarity=0.088 Sum_probs=197.5
Q ss_pred hhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCch
Q 012159 142 HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSP 221 (470)
Q Consensus 142 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~ 221 (470)
+..+.+....|.+.+.+.++..+.++.+|.++||+|||.+++++....++..++. ..++++..+++.|++.|+..|-.
T Consensus 61 ~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~-~~S~~F~afv~aR~l~Gi~kgnl- 138 (451)
T KOG2615|consen 61 EPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLW-ALSRNFAAFVLARFLGGIFKGNL- 138 (451)
T ss_pred CcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhccCch-
Confidence 3344466678999999999999999999999999999999999999988877666 46777767777799999997665
Q ss_pred hhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhc---ccCchHHH---HHHHHHHHH-HHHHHHhhccCCC
Q 012159 222 SAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE---NLGWESVF---YIFGLLGIA-WFSGFKILQEGET 294 (470)
Q Consensus 222 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~---~~g~~~~~---~~~~~~~~~-~~~~~~~~~~~~~ 294 (470)
....++++|.+++++|+++++.+....++|.++||.+||++.. ..|--+.+ ++..+++.. .....++++|+-+
T Consensus 139 ~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~ 218 (451)
T KOG2615|consen 139 SVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLP 218 (451)
T ss_pred HHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 6779999999999999999999999999999999999999987 33321111 122222222 3455667777644
Q ss_pred CCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 012159 295 SNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKA-------VWAMIYAHFCGSWGHYTCLSWLPTYFSEEL 367 (470)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 367 (470)
.+++...+.. ..+..++. .+. .+.+...-...++|++ ...+.+..+++...+.....+.+.+-++.+
T Consensus 219 ~rk~~~~~~~----~~~~~~~~-~~~-~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rf 292 (451)
T KOG2615|consen 219 LRKRNDEHST----LQEAADDR-LAL-LKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRF 292 (451)
T ss_pred chhhcccccc----hhhhhhhh-hhh-cchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCcc
Confidence 4333200000 00000000 000 0111111112333332 222344455555555555555555556778
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCCcch--------------------------------------
Q 012159 368 SLNLTEAAWVSILPPLASVLVTSIAAQFADNLI--ATGVETT-------------------------------------- 407 (470)
Q Consensus 368 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~--~~~~~~~-------------------------------------- 407 (470)
|+++.+.|-+.+..++.+.+.+.......+|.. .+.....
T Consensus 293 g~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~vt~ 372 (451)
T KOG2615|consen 293 GYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASVVTC 372 (451)
T ss_pred CCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHhhHH
Confidence 999999999988888888887777776666665 2111111
Q ss_pred -----------------HHHHHHhhhhHHHHHHHHHHHhhccCCceehhhHH
Q 012159 408 -----------------MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFA 442 (470)
Q Consensus 408 -----------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~ 442 (470)
+|+....+.++-++||++.|.+..+...-...++.
T Consensus 373 Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~a~~~ 424 (451)
T KOG2615|consen 373 LTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQPAYIA 424 (451)
T ss_pred HHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCceeee
Confidence 89999999999999999999888765443333333
No 93
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.86 E-value=3.2e-19 Score=160.45 Aligned_cols=341 Identities=16% Similarity=0.155 Sum_probs=233.5
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHH
Q 012159 111 QRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS 190 (470)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 190 (470)
.+|..........+...+-....+.+.|.+.+..|.+..+..++......+..+++..+|.++|++|||+.+.+..+..+
T Consensus 75 fq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~ 154 (528)
T KOG0253|consen 75 FQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTG 154 (528)
T ss_pred chhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHH
Confidence 35666666667777766766677777888888999999999999999999999999999999999999999999988877
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchH
Q 012159 191 LATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWES 270 (470)
Q Consensus 191 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~ 270 (470)
+..++. ...+++..+++.|.+.|+|.|+ .|...++-.+..|..+|..-+-.. ..+.+|.++...++-.+...+||||
T Consensus 155 v~~~is-~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~ 231 (528)
T KOG0253|consen 155 VFGVIS-GASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRY 231 (528)
T ss_pred HHHHhh-cCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 776665 4667779999999999999999 888899999999988888877766 8999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhh---hh-------------hhhhHHhhh----------ccC
Q 012159 271 VFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMK---KS-------------LSASLEEMG----------ESL 324 (470)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------~~~~~~~~~----------~~~ 324 (470)
.....+....+.....++++|.++..-.+.++.+...-.+ +. ..++.++.+ .+.
T Consensus 232 ~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke 311 (528)
T KOG0253|consen 232 LLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKE 311 (528)
T ss_pred HHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccc
Confidence 9998888777778888888888765433322221110000 00 000000000 011
Q ss_pred CCCCHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--C-----------------CCchhhHHHHHHHH
Q 012159 325 KDVPWKAIFRS---KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEEL--S-----------------LNLTEAAWVSILPP 382 (470)
Q Consensus 325 ~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--g-----------------~s~~~~~~~~~~~~ 382 (470)
......+++.. +....+....+...+.+++..-......+... + .+...--.=..+..
T Consensus 312 ~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllits 391 (528)
T KOG0253|consen 312 VRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITS 391 (528)
T ss_pred cccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHH
Confidence 11222333321 12222333334444444444444333333211 0 11111112244567
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcch-------------------------------------------------------
Q 012159 383 LASVLVTSIAAQFADNLIATGVETT------------------------------------------------------- 407 (470)
Q Consensus 383 ~~~~~~~~~~g~l~dr~~~~~~~~~------------------------------------------------------- 407 (470)
+..+.|.++.+++.||+|||+.+..
T Consensus 392 laefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatg 471 (528)
T KOG0253|consen 392 LAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATG 471 (528)
T ss_pred HhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcc
Confidence 8889999999999999999998776
Q ss_pred HHHHHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHHHHHHHHHHHHhh
Q 012159 408 MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLA 457 (470)
Q Consensus 408 ~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (470)
.|....++.+|+++.|++. ...+.. ......+...+++++++.....
T Consensus 472 vGtcSsmaRIggI~~p~iA-~~~e~s--~sl~i~vy~~~~ilagIavcff 518 (528)
T KOG0253|consen 472 VGTCSSMARIGGIFSPVIA-MRAELS--TSLPIFVYGALFILAGIAVCFF 518 (528)
T ss_pred hhhhhhHHhhhhhhhhHHH-HHhccc--eeehHHHHHHHHHHHHHHheee
Confidence 8889999999999999988 444433 2333344444455555544433
No 94
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.85 E-value=3.1e-19 Score=168.72 Aligned_cols=334 Identities=13% Similarity=0.060 Sum_probs=217.2
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHhHHhhhh-hcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHH--
Q 012159 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSH-RFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS-- 190 (470)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~-- 190 (470)
+..+.+...+++.++..+...++.+...+ ..|++.+++|.+.++..+...+.+++.|.++||+|.||-++....+..
T Consensus 7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l 86 (412)
T PF01306_consen 7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLL 86 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHH
Confidence 34444555566666667778888777554 589999999999999999999999999999999997776554433221
Q ss_pred HHHHHH----HHhhhHH-HHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcc
Q 012159 191 LATALL----PLLAGFM-PGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN 265 (470)
Q Consensus 191 ~~~~~~----~~~~~~~-~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 265 (470)
.+.+.. ++...+. ...+++.+..|++.....|...+++.++. ++.+.-.|-...++++|.+++..++|.+.+.
T Consensus 87 ~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i 164 (412)
T PF01306_consen 87 FGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNI 164 (412)
T ss_dssp CHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeee
Confidence 122111 1112222 22333344445555566677777766664 4567778888999999999999999999864
Q ss_pred cCchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHH
Q 012159 266 LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAH 345 (470)
Q Consensus 266 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 345 (470)
+-...||+..+.+++..++.+..+++.+++....+..... +++.+.....+++|+|++|.+.+..
T Consensus 165 -~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~l~k~~~fw~~~l~v 229 (412)
T PF01306_consen 165 -NPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAK--------------KDKVSLKDVLSLFKMRNFWFFVLFV 229 (412)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS--------------------HHHHHHHTTSHHHHHHHHHH
T ss_pred -CccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccC--------------CCCCcHHHHHHHhcchhHHHHHHHH
Confidence 5677888776666555544444433222221111110000 0000111246889999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC---CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch---------------
Q 012159 346 FCGSWGHYTCLSWLPTYFSEELS---LNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT--------------- 407 (470)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~g---~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~--------------- 407 (470)
......+.......+.|....+. .+....|.+.+...+..++...+.+++.+|+|.|+.+.+
T Consensus 230 ~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~ 309 (412)
T PF01306_consen 230 IGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFA 309 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhh
Confidence 88777777777778888875432 344567888889999999999999999999999987776
Q ss_pred ----------------------------------------HH-HHHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHHH
Q 012159 408 ----------------------------------------MG-ITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIF 446 (470)
Q Consensus 408 ----------------------------------------~g-~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~ 446 (470)
.. ..+....++..+.+.+.|.+.|+.| +...+++++.+
T Consensus 310 ~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G-~~~tylimg~i 388 (412)
T PF01306_consen 310 TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIG-FQHTYLIMGLI 388 (412)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcC-cHHHHHHHHHH
Confidence 22 2345667888999999999999986 34455555555
Q ss_pred HHHHHHHHHhhccCCCCCC
Q 012159 447 FYLTGTIVWLAFASSKPQN 465 (470)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~ 465 (470)
.+.+.+..+...++.+++.
T Consensus 389 v~~~~li~~f~l~~~~~~~ 407 (412)
T PF01306_consen 389 VLPFTLISAFTLKKDKKQI 407 (412)
T ss_dssp HHHHHHHHHHHS--SSSTT
T ss_pred HHHHHHHheeeecCCCccc
Confidence 5555555555555555543
No 95
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.85 E-value=2.3e-18 Score=165.94 Aligned_cols=295 Identities=15% Similarity=0.119 Sum_probs=219.3
Q ss_pred HHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhc-CcHHHHHHHHHHHHHHHHHH
Q 012159 119 TSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFG-GRKVLQTGVLIWSLATALLP 197 (470)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g-~r~~~~~~~~~~~~~~~~~~ 197 (470)
+...+++.+.....+.++++.+.++.|++..|+|.+.++..+...++++++|.++||.+ +|+++.+..++.++.....
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~- 85 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL- 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH-
Confidence 34556666677777888889999999999999999999999999999999999999986 5667766666655555444
Q ss_pred HhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhH-HhhhcccC---chHHHH
Q 012159 198 LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA-PPIIENLG---WESVFY 273 (470)
Q Consensus 198 ~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~-~~l~~~~g---~~~~~~ 273 (470)
...++++.+++..++..+......|...++..+... +++.-.|-...++++|.+++.... +.+....+ ..+.++
T Consensus 86 ~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (400)
T PF03825_consen 86 AFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFY 163 (400)
T ss_pred HHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHH
Confidence 345556777778888888888888898888888875 566777778888888888775542 33333322 334566
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHH
Q 012159 274 IFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHY 353 (470)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 353 (470)
+.++..++.....+.+|+.++++..+...++. ...+..+++|+|+++.+.+..++...+..
T Consensus 164 i~~~~~~ll~~~~l~lp~~~~~~~~~~~~~~~-------------------~~~~~~~llk~~~~~~Fll~~~l~~~~~~ 224 (400)
T PF03825_consen 164 IAAILSLLLAGFALFLPKTPPKRSAKESVKKL-------------------LGLDALKLLKNPRFLVFLLAAFLIGISHA 224 (400)
T ss_pred HHHHHHHHHHHHHHhCCCCccccccCCCcccc-------------------cchHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 66665555555555566554222111111100 01123578999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch--------------------------
Q 012159 354 TCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT-------------------------- 407 (470)
Q Consensus 354 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~-------------------------- 407 (470)
....+.+.|+++.-|.+....+.+.++..++.++.....+++.+|+|.++.+..
T Consensus 225 ~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~ 304 (400)
T PF03825_consen 225 AYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQ 304 (400)
T ss_pred HHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 999999999997644788888888889999999999999999999998876665
Q ss_pred ----------------------------------HHHHHH-hhhhHHHHHHHHHHHhhccCCc
Q 012159 408 ----------------------------------MGITNT-VGAVPGIVGVALTGYLLDSTHS 435 (470)
Q Consensus 408 ----------------------------------~g~~~~-~~~~~~~ig~~~~g~l~~~~~~ 435 (470)
.+++.. ..++|..+|..++|++.|..+.
T Consensus 305 ~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~ 367 (400)
T PF03825_consen 305 LLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGA 367 (400)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcc
Confidence 455444 4578999999999999998763
No 96
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.84 E-value=7.3e-18 Score=168.58 Aligned_cols=168 Identities=15% Similarity=0.204 Sum_probs=135.3
Q ss_pred HHHHHHHHHHHHhhhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhh-hcCcHHHHHHHHHHHHHH
Q 012159 116 IGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQTGVLIWSLAT 193 (470)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~ 193 (470)
+..+++..++..+..+.+...++. +.+++|++..+.+++.+.+........+++|+++|| +|||+++.++.++++++.
T Consensus 23 ~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~ 102 (500)
T PRK09584 23 FYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGY 102 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 344555555565665556665555 668899999999998888877766777899999999 599999999999999888
Q ss_pred HHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccc--hhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHH
Q 012159 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEE--RSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (470)
Q Consensus 194 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~ 271 (470)
.++++..+..+.+++.+++.|++.|...+...+++.+++|+++ |..++++++.+.++|..+||.+++++.+++|||+.
T Consensus 103 ~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~ 182 (500)
T PRK09584 103 ALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVA 182 (500)
T ss_pred HHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHH
Confidence 7775444445667788999999999999999999999997543 45688999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 012159 272 FYIFGLLGIAWF 283 (470)
Q Consensus 272 ~~~~~~~~~~~~ 283 (470)
|++.++..++..
T Consensus 183 F~i~~i~~~i~~ 194 (500)
T PRK09584 183 FALSVVGMLITV 194 (500)
T ss_pred HHHHHHHHHHHH
Confidence 999876544433
No 97
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.83 E-value=1.4e-20 Score=163.19 Aligned_cols=310 Identities=13% Similarity=0.128 Sum_probs=226.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhh-hcCcHHHHHHHHHHHH
Q 012159 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQTGVLIWSL 191 (470)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~ 191 (470)
...+..+|+..|-+++...........+..+.+++.++..++.+++.....+...++|++.|| +|-|..-++-+....+
T Consensus 43 ~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~ 122 (459)
T KOG4686|consen 43 FMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFL 122 (459)
T ss_pred HHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHH
Confidence 344455555555566666666666777888889999999999999999999999999999996 6777665555555556
Q ss_pred HHHHHHH--hhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCc-
Q 012159 192 ATALLPL--LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW- 268 (470)
Q Consensus 192 ~~~~~~~--~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~- 268 (470)
+.++++. ..+.+|++..+|++.|+|.-....+.+.+...|+..|+.+.++|+..+...+|..+--.+.+++.+..+-
T Consensus 123 GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~ 202 (459)
T KOG4686|consen 123 GQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRM 202 (459)
T ss_pred HHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHh
Confidence 6655532 4577899999999999998888889999999999999999999999999999999888888888765321
Q ss_pred -----hHHH---HHHHHHH-HHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHH
Q 012159 269 -----ESVF---YIFGLLG-IAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVW 339 (470)
Q Consensus 269 -----~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (470)
+... ...+... ....++...+--.+...++. .+.++. ...+..+....+. -.|++|
T Consensus 203 ~~~~ghT~LG~~l~~~~~tc~~slical~lg~~D~rAeri-------lh~e~g------~~Ge~pkLtdv~~--f~ppfw 267 (459)
T KOG4686|consen 203 FPGVGHTLLGLWLCFEVKTCKQSLICALSLGLSDDRAERI-------LHLEEG------FLGEEPKLTDVNT--FYPPFW 267 (459)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHH-------HhhhcC------cccCCcccccccc--cCccHH
Confidence 1111 1111111 11112211111100000000 000000 0000000001011 137899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch------------
Q 012159 340 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT------------ 407 (470)
Q Consensus 340 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~------------ 407 (470)
.+.+.++++..+.+.+...-|.++++.+|+|+..++-+.+.....+.+...+.|.++||+|++-..+.
T Consensus 268 ~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~ 347 (459)
T KOG4686|consen 268 VLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSG 347 (459)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999876665
Q ss_pred ------------------------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCcee
Q 012159 408 ------------------------------------------MGITNTVGAVPGIVGVALTGYLLDSTHSWS 437 (470)
Q Consensus 408 ------------------------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~ 437 (470)
.|.++.+..+|..+.|.+.|++.|..+++.
T Consensus 348 l~Ft~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~ 419 (459)
T KOG4686|consen 348 LFFTFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYD 419 (459)
T ss_pred HHhhhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchh
Confidence 888999999999999999999999877543
No 98
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.82 E-value=2.4e-18 Score=174.06 Aligned_cols=279 Identities=17% Similarity=0.098 Sum_probs=198.1
Q ss_pred hhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCc
Q 012159 141 SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS 220 (470)
Q Consensus 141 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~ 220 (470)
.+.++.+.....+..+++.+|.++|++++|.++||+|||++++++.++..++.++. .++++++.+++.|++.|++.++.
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~-a~a~~~~~~~~~Rfl~G~~~~~~ 188 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILT-AFAPNYWMFLIFRFLSGFFGSGP 188 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHH-HHhCcHHHHHHHHHHHHhhccch
Confidence 35566788889999999999999999999999999999999999999999988666 47788899999999999999999
Q ss_pred hhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 012159 221 PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATL 300 (470)
Q Consensus 221 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (470)
......++.|++++++|+.+..+ ......++.+++++++++.. +||+.+++..+..++.++..++.+|.++....+.
T Consensus 189 ~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g 265 (521)
T KOG0255|consen 189 LTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKG 265 (521)
T ss_pred hHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcC
Confidence 99999999999999999999999 88888889999999999887 8999999999998877777655557666543333
Q ss_pred CCccchhhhhhh---------hhh---hH---H--hhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012159 301 APRSNYINMKKS---------LSA---SL---E--EMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYF 363 (470)
Q Consensus 301 ~~~~~~~~~~~~---------~~~---~~---~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 363 (470)
+.++.....++. ... .. . ......+...+..+++.|++....+...+..+.......-++...
T Consensus 266 ~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~ 345 (521)
T KOG0255|consen 266 RIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNV 345 (521)
T ss_pred chHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhh
Confidence 222111111110 000 00 0 001112334577888888655555555544443333333333333
Q ss_pred HHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHhhhhHHHHHHHHHHHhhccCC
Q 012159 364 SEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMGITNTVGAVPGIVGVALTGYLLDSTH 434 (470)
Q Consensus 364 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~g~~~~~~~~~~~ig~~~~g~l~~~~~ 434 (470)
. .+|.+.. +.....+.....+....+...|+.|||. ....+.+...++.++.+++.+...
T Consensus 346 ~-~lg~~~~---~~~~~~~~~~~p~~~~~~~~~~~~gR~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 405 (521)
T KOG0255|consen 346 S-GLGGNIY---LNFTLSGLVELPAYFRNGLLLPEFGRRP-------PLFLSLFLAGIGLLLFGWLPDDLG 405 (521)
T ss_pred h-hcCchHH---HHHHHHHHHHhhHHHHHHHHHHHhCcHH-------HHHHHHHHHHHHHHHHHHhhccch
Confidence 3 3444432 3444444577777777889999998884 445555556666666677665443
No 99
>PTZ00207 hypothetical protein; Provisional
Probab=99.81 E-value=2.3e-17 Score=164.26 Aligned_cols=287 Identities=12% Similarity=0.116 Sum_probs=199.2
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHH
Q 012159 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (470)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (470)
+|..+...+....+ ....+.++.+.+.+.+++|++..+++++.++. ....+++++.|++.||+|+|+++.++.+++++
T Consensus 26 Rw~~lva~~~~~~~-~g~~y~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~i 103 (591)
T PTZ00207 26 RFALLVLGAFCSIC-TSFMYAFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCL 103 (591)
T ss_pred hHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 44444433333333 23345666778889999999999999998874 44556788899999999999999999999999
Q ss_pred HHHHHHHhh-----hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHH-HHhhHHhhhcc
Q 012159 192 ATALLPLLA-----GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVA-GLLLAPPIIEN 265 (470)
Q Consensus 192 ~~~~~~~~~-----~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~~~~~l~~~ 265 (470)
+.+++++.. .+++.+++.|++.|++.+...+.....+.+++| ++||++.|+...+.++|.++ +++..+++.
T Consensus 104 G~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-- 180 (591)
T PTZ00207 104 GTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-- 180 (591)
T ss_pred HHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 998886541 467899999999999999998999999999997 88999999999999999986 444444443
Q ss_pred cCchHHHHHHHHHHHHHHHHHHhhccCCCCCCC---C--CCCccchh----------------hh---------------
Q 012159 266 LGWESVFYIFGLLGIAWFSGFKILQEGETSNGA---T--LAPRSNYI----------------NM--------------- 309 (470)
Q Consensus 266 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~----------------~~--------------- 309 (470)
.+|++.|++.+++.++..++++.+.+.++.... + .+++++.. +.
T Consensus 181 ~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~ 260 (591)
T PTZ00207 181 DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLP 260 (591)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHH
Confidence 368888998888876665555444333322110 0 00111000 00
Q ss_pred -----h------h-------h-hh-----------------------hh---H------------Hhh---h---c---c
Q 012159 310 -----K------K-------S-LS-----------------------AS---L------------EEM---G---E---S 323 (470)
Q Consensus 310 -----~------~-------~-~~-----------------------~~---~------------~~~---~---~---~ 323 (470)
. + . .. +. . .+. . + .
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 340 (591)
T PTZ00207 261 LQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAP 340 (591)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCC
Confidence 0 0 0 00 00 0 000 0 0 0
Q ss_pred CCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchh--hHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 012159 324 LKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTE--AAWVSILPPLASVLVTSIAAQFADNLIA 401 (470)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~--~~~~~~~~~~~~~~~~~~~g~l~dr~~~ 401 (470)
....++.+.+++..+|.+++..++.......+...+.++.+..-|.+... ...+.++.++++.+|++..|.+.....+
T Consensus 341 ~~~~t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~ 420 (591)
T PTZ00207 341 QFQETFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQK 420 (591)
T ss_pred CCcchHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHh
Confidence 01126778888999999999999998888888888888887532763333 3337899999999999999999844444
Q ss_pred cC
Q 012159 402 TG 403 (470)
Q Consensus 402 ~~ 403 (470)
|+
T Consensus 421 ~~ 422 (591)
T PTZ00207 421 RR 422 (591)
T ss_pred hc
Confidence 43
No 100
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.80 E-value=1.1e-17 Score=165.81 Aligned_cols=312 Identities=13% Similarity=0.068 Sum_probs=210.1
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHh-HHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhc-----CcHHHHHHHH
Q 012159 114 KLIGTTSLAFVICNMDKVNLSVA-IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFG-----GRKVLQTGVL 187 (470)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g-----~r~~~~~~~~ 187 (470)
..+.++...++..++. ...... .+.+.+++|++..+++...++..+...+-.+ +|+++||++ ||+.++++.+
T Consensus 26 ~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~ 103 (468)
T TIGR00788 26 VVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGL 103 (468)
T ss_pred hHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHH
Confidence 4445555567777777 444444 5557778999999999999999999988655 999999997 6777777766
Q ss_pred HHH-HHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhH---HHHHHhhhhhHHHHHHhhHHhhh
Q 012159 188 IWS-LATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRA---VSFVFGGLSFGSVAGLLLAPPII 263 (470)
Q Consensus 188 ~~~-~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~---~~~~~~~~~~g~~~g~~~~~~l~ 263 (470)
+.+ +....++...+......+..++.+++.+...++..++..|..+ +++... .++.....++|.++|+.++|.+.
T Consensus 104 l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~ 182 (468)
T TIGR00788 104 LGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLL 182 (468)
T ss_pred HHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHH
Confidence 652 3332232222333344457889999999999999999999998 555443 33444445689999999999999
Q ss_pred cccCchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccc-h-hhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHH
Q 012159 264 ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSN-Y-INMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAM 341 (470)
Q Consensus 264 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (470)
+.++|+..|++.+++.++..+..++++|+++.......+++. . ............+ ........+++|.+|..
T Consensus 183 ~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~l~~~~i~~~ 257 (468)
T TIGR00788 183 DKTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKV-----QILGLRGAIQLLEIAKP 257 (468)
T ss_pred HhcCcchHHHHHHHHHHHHHHHHHhcccccccccccccccchhhhhhhhhhHHHHHHH-----HHHHHHHHHhcHHHHHH
Confidence 999999999999888877766666666653111111000000 0 0000000000000 01123456788888876
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch-------------
Q 012159 342 IYAHFC-GSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT------------- 407 (470)
Q Consensus 342 ~l~~~~-~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~------------- 407 (470)
.+..++ +.........+. .+.++.+|+++...|++....+++.+++..+.+++.+|++.|+.+..
T Consensus 258 l~fifl~~~~~~~~~~~~f-~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~ 336 (468)
T TIGR00788 258 LIFIFLSYANLPGASGSVF-CATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDL 336 (468)
T ss_pred HHHHHHHHhhcCCCCceeE-EEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCce
Confidence 665555 222212111111 12334679999999999999999999999999999999887765433
Q ss_pred ----------------------------------------------------HHHHHHhhhhHHHHHHHHHHHhhccCC
Q 012159 408 ----------------------------------------------------MGITNTVGAVPGIVGVALTGYLLDSTH 434 (470)
Q Consensus 408 ----------------------------------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~ 434 (470)
.++.+.+..+|..+++.++|++.+..+
T Consensus 337 ~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 337 ILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred eeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 888888999999999999999988765
No 101
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.79 E-value=2.7e-16 Score=153.62 Aligned_cols=276 Identities=12% Similarity=0.112 Sum_probs=181.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhh----hhcCcHHHHHH-HH
Q 012159 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAK----IFGGRKVLQTG-VL 187 (470)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~g~r~~~~~~-~~ 187 (470)
|+++ .++...+...+.+......++.+.+++|.+....+++..+..+...+.+++.|+++| |+|||+.++++ .+
T Consensus 4 ~~li-~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~ 82 (477)
T TIGR01301 4 RKLL-RVASVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAA 82 (477)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHH
Confidence 3443 334444455666777777777788999999999999999999999999999999999 59999998875 44
Q ss_pred HHHHHHHHHHHhhhH----------------HHHHHHHHHHHHhhccCchhhHHHHhhhccCccch--hhHHHHHHhhhh
Q 012159 188 IWSLATALLPLLAGF----------------MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEER--SRAVSFVFGGLS 249 (470)
Q Consensus 188 ~~~~~~~~~~~~~~~----------------~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~ 249 (470)
...++.+++++..+. .+..+++..+..++.....+...++++|.+|+++| +.+.++.+.+.+
T Consensus 83 ~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~ 162 (477)
T TIGR01301 83 LVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMA 162 (477)
T ss_pred HHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHH
Confidence 444444444332211 02233334445567777888889999999998765 679999999999
Q ss_pred hHHHHHHhhHHhh--hccc-------------CchHHHHHHHHHHHHHHHHHH-hhccCCCCCCCCCCCccchhhhhhhh
Q 012159 250 FGSVAGLLLAPPI--IENL-------------GWESVFYIFGLLGIAWFSGFK-ILQEGETSNGATLAPRSNYINMKKSL 313 (470)
Q Consensus 250 ~g~~~g~~~~~~l--~~~~-------------g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (470)
+|.++|+.++++. .+.+ +.++.|++.+++.++..+... ..+|++...+++..+ ++..
T Consensus 163 lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~-~~~~------ 235 (477)
T TIGR01301 163 IGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFIN-SEAA------ 235 (477)
T ss_pred HHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchh-hhcc------
Confidence 9999999999875 2211 568889988887666555444 444543322111000 0000
Q ss_pred hhhHHhhhccCCCCCHHHHhc-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCch------h----hHHH
Q 012159 314 SASLEEMGESLKDVPWKAIFR-----SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSE-ELSLNLT------E----AAWV 377 (470)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~------~----~~~~ 377 (470)
+.++......++++++ .+.++.+++..++.+++++.+..|.+.|+.+ .++-++. + ..+.
T Consensus 236 -----~~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~ 310 (477)
T TIGR01301 236 -----PPSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFG 310 (477)
T ss_pred -----cccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHH
Confidence 0000000112233332 3678999999999999999999999998764 4553321 1 1233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Q 012159 378 SILPPLASVLVTSIAAQFADNLIA 401 (470)
Q Consensus 378 ~~~~~~~~~~~~~~~g~l~dr~~~ 401 (470)
...+.+...+.+++..++.+|+|+
T Consensus 311 l~~~s~~~~i~s~~l~~l~~~~g~ 334 (477)
T TIGR01301 311 LMLNSVVLGITSIGMEKLCRGWGA 334 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc
Confidence 444555555666677777777764
No 102
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.79 E-value=5.5e-16 Score=152.39 Aligned_cols=295 Identities=17% Similarity=0.160 Sum_probs=218.6
Q ss_pred hhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHH-HHHHHHHHh-hhHHHHHHHHHHHHHhhccCchhhHHHH
Q 012159 150 VAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS-LATALLPLL-AGFMPGLVLSRVLVGIGEGVSPSAATDL 227 (470)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~-~~~~~~~~~-~~~~~~l~~~~~l~G~~~~~~~~~~~~~ 227 (470)
..++..++..+..++..++.|.++|+-|+||.++....+.+ +...++.+. ++.++...++.++.-++.+......+++
T Consensus 71 ~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~ 150 (477)
T PF11700_consen 71 LWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAY 150 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35678889999999999999999999998777766544443 344444333 3445555666666677778888999999
Q ss_pred hhhccCccch--------------------------hhHHHHHHhhhhhHHHHHHhhHHhhhcc--------cCchHHHH
Q 012159 228 IARSIPLEER--------------------------SRAVSFVFGGLSFGSVAGLLLAPPIIEN--------LGWESVFY 273 (470)
Q Consensus 228 i~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~g~~~~~~l~~~--------~g~~~~~~ 273 (470)
+.+..+++++ ++..+.-...+.+|+++.-++.-.+... .+.|..+.
T Consensus 151 LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~ 230 (477)
T PF11700_consen 151 LPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFL 230 (477)
T ss_pred hHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHH
Confidence 9999998888 8999998888889988877765554322 23477788
Q ss_pred HHHHHHHHHHHH-HHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHH
Q 012159 274 IFGLLGIAWFSG-FKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGH 352 (470)
Q Consensus 274 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 352 (470)
+.++..++..+. +++++++++++..+... ... .....+. ...++++.+.|.+..++++.+++.-+.
T Consensus 231 ~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~--~~~--~~g~~~l---------~~t~k~~~~~~~~~~fLia~~l~~dg~ 297 (477)
T PF11700_consen 231 IVALWWLVFSIPLFLWLPDRPGPRPLPSGS--SYL--RFGFKRL---------WRTFKEIRKLRQLFLFLIAYFLYSDGV 297 (477)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCCCcch--hHH--HHHHHHH---------HHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 877776555444 44444443322111111 100 0000000 113467778899999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCcch-----------------------
Q 012159 353 YTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT--GVETT----------------------- 407 (470)
Q Consensus 353 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~--~~~~~----------------------- 407 (470)
..+..+...|.++.+|++..+...+..+..+.+++|.++.|++.||+|.| +.+..
T Consensus 298 ~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~ 377 (477)
T PF11700_consen 298 NTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGL 377 (477)
T ss_pred HHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCc
Confidence 99999999999999999999999999999999999999999999999999 44333
Q ss_pred ----------------------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHHHH
Q 012159 408 ----------------------------------------MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFF 447 (470)
Q Consensus 408 ----------------------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~ 447 (470)
+|++.+.+-..+.+||++.|.+.+.++..+..+..+.+++
T Consensus 378 ~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf 457 (477)
T PF11700_consen 378 KSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLF 457 (477)
T ss_pred ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 9999999999999999999999999998888777766655
Q ss_pred HHHHHHHHhh
Q 012159 448 YLTGTIVWLA 457 (470)
Q Consensus 448 ~~~~~~~~~~ 457 (470)
++...+++.+
T Consensus 458 ~~gl~ll~~v 467 (477)
T PF11700_consen 458 LIGLILLFFV 467 (477)
T ss_pred HHHHHHHhhc
Confidence 5554444333
No 103
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.79 E-value=1.4e-15 Score=149.10 Aligned_cols=174 Identities=17% Similarity=0.182 Sum_probs=135.5
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhh-cCcHHHHHHHHHHHH
Q 012159 114 KLIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF-GGRKVLQTGVLIWSL 191 (470)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~ 191 (470)
+-+..++...+...+..+.+...+|. +.+++|++..+.+.+.+.+.+...++.+++|+++||+ |||+++.++.++.++
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~l 88 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAI 88 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHH
Confidence 44445555556666666666666666 5667899999999999999999999999999999999 999999999999888
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCcc--chhhHHHHHHhhhhhHHHHHHhhHHhhhcccCch
Q 012159 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE--ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE 269 (470)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~ 269 (470)
+.++++....+...+++...+.+++.|...+...++++|.+|++ +|.+++++.+.+.++|+.++|.+.+++.+.+||+
T Consensus 89 g~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~ 168 (493)
T PRK15462 89 GHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWA 168 (493)
T ss_pred HHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChH
Confidence 87665422222123444444555666777788889999999875 6999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 012159 270 SVFYIFGLLGIAWFSGFK 287 (470)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~ 287 (470)
+.|.+.++..++.++.++
T Consensus 169 ~~F~iaaigm~l~li~~~ 186 (493)
T PRK15462 169 MGFGLAAVGMIAGLVIFL 186 (493)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999987765444444433
No 104
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.78 E-value=8.8e-17 Score=149.53 Aligned_cols=313 Identities=15% Similarity=0.152 Sum_probs=235.5
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHH
Q 012159 105 PWKNIPQRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQT 184 (470)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 184 (470)
..|..++||.+++...+..+.+.+.+..+++........+| +....-|...+|++.+....+++-|+.||+|-|...++
T Consensus 36 ~~rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~ll 114 (480)
T KOG2563|consen 36 GHRVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLL 114 (480)
T ss_pred ccccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHH
Confidence 45566778888888888888888888888877777777888 77778899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhh-----hHHH--HHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHh
Q 012159 185 GVLIWSLATALLPLLA-----GFMP--GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLL 257 (470)
Q Consensus 185 ~~~~~~~~~~~~~~~~-----~~~~--~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 257 (470)
+..+.+++..+-.... +.++ ..+.+..+.+.+.-.......-+..-||++++|..+..+-..+..+|.++|.+
T Consensus 115 gt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~l 194 (480)
T KOG2563|consen 115 GTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFL 194 (480)
T ss_pred HHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhh
Confidence 9999999887653221 3344 67788888888877777666777888999999999999999999999999998
Q ss_pred hHHhhhccc------CchH--HHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCH
Q 012159 258 LAPPIIENL------GWES--VFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPW 329 (470)
Q Consensus 258 ~~~~l~~~~------g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (470)
+...+..+- .|.. .|+..++++.+.++...+...++++.+........+ +..-..+.
T Consensus 195 lppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~---------------~~~f~~si 259 (480)
T KOG2563|consen 195 LPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQ---------------DASFPKSI 259 (480)
T ss_pred ccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhh---------------cCcHHHHH
Confidence 888887654 2443 344445554444433333333322221111111000 01112346
Q ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch--
Q 012159 330 KAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT-- 407 (470)
Q Consensus 330 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~-- 407 (470)
++.++|+++..+.+.+.+....+++..+.+-.-+.. -|++...+|.+.....+++++++++.|.+.||.+..+....
T Consensus 260 ~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~-sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~ 338 (480)
T KOG2563|consen 260 KSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCP-SGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVL 338 (480)
T ss_pred HHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc-ccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHH
Confidence 789999999999888888888777777777655553 48888899999999999999999999999999987655332
Q ss_pred ----------------------------------------------------------HHHHHHhhhhHHHHHHHHHHHh
Q 012159 408 ----------------------------------------------------------MGITNTVGAVPGIVGVALTGYL 429 (470)
Q Consensus 408 ----------------------------------------------------------~g~~~~~~~~~~~ig~~~~g~l 429 (470)
.|.++..+.+-+.+-..+.+..
T Consensus 339 ~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~ 418 (480)
T KOG2563|consen 339 YLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGIL 418 (480)
T ss_pred HHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHH
Confidence 7888888888888888888888
Q ss_pred hccCC
Q 012159 430 LDSTH 434 (470)
Q Consensus 430 ~~~~~ 434 (470)
.+..+
T Consensus 419 ~~~~~ 423 (480)
T KOG2563|consen 419 AEDLG 423 (480)
T ss_pred hhccC
Confidence 87666
No 105
>PRK09669 putative symporter YagG; Provisional
Probab=99.78 E-value=5.2e-17 Score=160.98 Aligned_cols=254 Identities=13% Similarity=0.047 Sum_probs=169.5
Q ss_pred hhHHHh-HHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhh----hcCc-HHHHHHHHHHHHHHHHHHHhh----
Q 012159 131 VNLSVA-IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI----FGGR-KVLQTGVLIWSLATALLPLLA---- 200 (470)
Q Consensus 131 ~~~~~~-~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~g~r-~~~~~~~~~~~~~~~~~~~~~---- 200 (470)
..++.+ ...+.+.+|+++.++|.+.++..+..++..++.|+++|| +||| +.++.+.+..++...++...+
T Consensus 26 ~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~ 105 (444)
T PRK09669 26 QTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGA 105 (444)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCc
Confidence 334444 555788899999999999999999999999999999998 6774 555566666666654442222
Q ss_pred -hHHHHHHHHHHHHHhhccCchhhHHHHhhhcc-CccchhhHHHHHHhhhhhHHHHHHhhHHhhhc-------ccCchHH
Q 012159 201 -GFMPGLVLSRVLVGIGEGVSPSAATDLIARSI-PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-------NLGWESV 271 (470)
Q Consensus 201 -~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-------~~g~~~~ 271 (470)
.....+++..++.+.+.........++.+++. ++++|.+..++...+..+|..+++.+...+.. ..||+..
T Consensus 106 ~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~ 185 (444)
T PRK09669 106 TGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYA 185 (444)
T ss_pred chHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHH
Confidence 11344555566667766677777889999988 56889998888888888887777765544332 2467878
Q ss_pred HHHHHHHHHHHHHHHHhh-ccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHH
Q 012159 272 FYIFGLLGIAWFSGFKIL-QEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSW 350 (470)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 350 (470)
+.+.+++.++..+..++. +|+..++ + .++ . .....++.+++||.++.+.+..++...
T Consensus 186 ~~i~~ii~~v~~~~~~~~~~e~~~~~-~--~~~-~------------------~~~~~~~~~~~n~~~~~l~~~~~~~~~ 243 (444)
T PRK09669 186 MMVMGLLGVVLFFCCFFMTKERYTPE-V--DNS-S------------------SVWKDLKLLLGNSQWRIMFIFNVVLLT 243 (444)
T ss_pred HHHHHHHHHHHHHHHhCCeEEecCCC-C--cCC-C------------------CHHHHHHHHhCCchHHHHHHHHHHHHH
Confidence 887777766554444333 3321111 0 000 0 001234678899999988877777666
Q ss_pred HHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch
Q 012159 351 GHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT 407 (470)
Q Consensus 351 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~ 407 (470)
.........+.|.+...+ ++...+.+.....+..+++.++.+++.||+++|+....
T Consensus 244 ~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~ 299 (444)
T PRK09669 244 AVVTRGGATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKW 299 (444)
T ss_pred HHHHHhhhhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHH
Confidence 665555544544443333 23344455556667788888999999999998876543
No 106
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.77 E-value=8.6e-17 Score=150.76 Aligned_cols=216 Identities=14% Similarity=0.104 Sum_probs=168.3
Q ss_pred hhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcc-------------
Q 012159 199 LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN------------- 265 (470)
Q Consensus 199 ~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~------------- 265 (470)
..++++.+++..++.|.|.+...+..+.++++..+++++++.+++.+.+.++|..++|++++.+...
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~ 85 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATAN 85 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhh
Confidence 4466789999999999999999999999999999999999999999999999999999999988732
Q ss_pred ---cCchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHH
Q 012159 266 ---LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMI 342 (470)
Q Consensus 266 ---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (470)
..|+++|++.+++.++..+.+.+.+.++.+++.. ++.. + ++ ....++.+++|.++...
T Consensus 86 ~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~--~~~~-------------~-~~---~~~~~~~~~~~~~~l~~ 146 (310)
T TIGR01272 86 AEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADV--ARVS-------------S-GD---TTQKTSAFQFTHLVLGA 146 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcccc--cccc-------------c-cc---ccchhhHHhhHHHHHHH
Confidence 3689999977777655555544443322111100 0000 0 00 00113567788999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--hCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch-------------
Q 012159 343 YAHFCGSWGHYTCLSWLPTYFSEE--LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT------------- 407 (470)
Q Consensus 343 l~~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~------------- 407 (470)
+..+++...+.++..|++.|+.+. +|+++.+++...+.+..+.++|+++.+++.||++.++.+..
T Consensus 147 ~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~ 226 (310)
T TIGR01272 147 LGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAA 226 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 888888889999999999999854 69999999999999999999999999999999998876543
Q ss_pred ----------------------------------------HHHHHHhhhhHHHHHHHHHHHhhccCC
Q 012159 408 ----------------------------------------MGITNTVGAVPGIVGVALTGYLLDSTH 434 (470)
Q Consensus 408 ----------------------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~ 434 (470)
.++ ...+.+|++++|++.|.+.|..+
T Consensus 227 ~~~~~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~~asai-~~~~~~Gg~i~P~l~G~lad~~g 292 (310)
T TIGR01272 227 LTHGYVAMWFVLALGLFNSIMFPTIFSLALNALGRHTSQGSGI-LCLAIVGGAIVPLLQGSLADCLG 292 (310)
T ss_pred HcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHH-HHHHHhcchHHHHHHHHHHHhcc
Confidence 333 45677788888888888888665
No 107
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.76 E-value=6.2e-18 Score=156.95 Aligned_cols=319 Identities=21% Similarity=0.252 Sum_probs=219.3
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhc-C-------CCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHH
Q 012159 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRF-G-------WNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQ 183 (470)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g-------~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~ 183 (470)
..+.+.+..++++...++...++...+.+...+ | ++....+.+..+..+|.++|++++|++.||+|||+++.
T Consensus 39 ~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG 118 (538)
T KOG0252|consen 39 HFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYG 118 (538)
T ss_pred HHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhh
Confidence 456677777888888888888888877765433 2 45677889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhh------hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHh
Q 012159 184 TGVLIWSLATALLPLLA------GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLL 257 (470)
Q Consensus 184 ~~~~~~~~~~~~~~~~~------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 257 (470)
..++++.++++++++.. .-.+.+...|++.|+|.|+-+|...+..+|...++.||...+...+..++|...|.+
T Consensus 119 ~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~i 198 (538)
T KOG0252|consen 119 KELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGI 198 (538)
T ss_pred HHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccH
Confidence 99999999887654321 224678899999999999999999999999999999999999988888888887777
Q ss_pred hHHhhhccc---------------CchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccc-hhhhhhhh----hhh-
Q 012159 258 LAPPIIENL---------------GWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSN-YINMKKSL----SAS- 316 (470)
Q Consensus 258 ~~~~l~~~~---------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~- 316 (470)
++-.+...+ -||..+.+.++.+++....-+.++|+++...-...+.+. ..+..+.. .++
T Consensus 199 vt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~ 278 (538)
T KOG0252|consen 199 VALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAES 278 (538)
T ss_pred HHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhh
Confidence 665554211 289888888888888887778888876654111100000 00000000 000
Q ss_pred HHhh--hccCCCC-CHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHH--------HHHH-H
Q 012159 317 LEEM--GESLKDV-PWKAIFRS---KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAW--------VSIL-P 381 (470)
Q Consensus 317 ~~~~--~~~~~~~-~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~--------~~~~-~ 381 (470)
..+. ....... .+...+.. +.+...+...|+...+++....+...+++. .|+.+..... ...+ .
T Consensus 279 ~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~~~iia 357 (538)
T KOG0252|consen 279 TAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSA-IGVIPSANTYHELFKVAEGNLIIA 357 (538)
T ss_pred ccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHh-hccCCCcchHHHHHHHHHHHHHHH
Confidence 0000 0011111 12233322 344555667777788888888888888874 5765544332 1111 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcch------------------------------------------------------
Q 012159 382 PLASVLVTSIAAQFADNLIATGVETT------------------------------------------------------ 407 (470)
Q Consensus 382 ~~~~~~~~~~~g~l~dr~~~~~~~~~------------------------------------------------------ 407 (470)
..+.+.|..+...++|++||+.....
T Consensus 358 ~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FPa 437 (538)
T KOG0252|consen 358 VCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPA 437 (538)
T ss_pred HHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchH
Confidence 12223345555667899998865443
Q ss_pred ------HHHHHHhhhhHHHHHHHHHHHhhc
Q 012159 408 ------MGITNTVGAVPGIVGVALTGYLLD 431 (470)
Q Consensus 408 ------~g~~~~~~~~~~~ig~~~~g~l~~ 431 (470)
-|+....+-+|+++|....+++.+
T Consensus 438 rvR~t~hGIsAA~GK~GAivg~~~F~~~t~ 467 (538)
T KOG0252|consen 438 RVRSTCHGISAASGKAGAIVGAFGFLYLTD 467 (538)
T ss_pred HHhhhhhhHHHHhccchHHHHHHHhhHhhh
Confidence 677788888999999999999888
No 108
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.75 E-value=2.9e-16 Score=154.86 Aligned_cols=253 Identities=17% Similarity=0.199 Sum_probs=191.1
Q ss_pred HhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhh----hhcCcHHH-HHHHHHHHHHHHHHHHhhh-------H
Q 012159 135 VAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAK----IFGGRKVL-QTGVLIWSLATALLPLLAG-------F 202 (470)
Q Consensus 135 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~g~r~~~-~~~~~~~~~~~~~~~~~~~-------~ 202 (470)
...+.+.+.+|+++..+|++..+..+..++..|+.|.++| |+||||.. +++....+++..++....+ .
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~ 102 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAK 102 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhH
Confidence 3355677888999999999999999999999999999999 78976654 4666777777666633312 1
Q ss_pred HHHHHHHHHHHHhhccCchhhHHHHhhhccC-ccchhhHHHHHHhhhhhHHHHHHhhHHhhhccc-------CchHHHHH
Q 012159 203 MPGLVLSRVLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-------GWESVFYI 274 (470)
Q Consensus 203 ~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-------g~~~~~~~ 274 (470)
...+.+..++..++.........++..|..+ +++|.+..+.-..+..+|..+...+.+.+.+.. +|++..++
T Consensus 103 ~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v 182 (428)
T PF13347_consen 103 LVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALV 182 (428)
T ss_pred HHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHH
Confidence 2234666777789999999999999999996 578999999999988888876666666665432 58888888
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHH
Q 012159 275 FGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYT 354 (470)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 354 (470)
.+++.++..++..+..++++.+.....+ +..-...++.+++||.++.+.+..++...+...
T Consensus 183 ~~iv~~v~~~i~~~~~ke~~~~~~~~~~-------------------~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~ 243 (428)
T PF13347_consen 183 LAIVGLVFFLITFFFVKERSVEVTEQEK-------------------KISLRDSLRSLFRNRPFRILLLAFFLQWLAFAL 243 (428)
T ss_pred HHHHHHHHhhhhhheeeecccccccccc-------------------ccccccchhhhcccchHHHHHHHHHHHHhhhhh
Confidence 8887766655554443331111110000 011123467889999999999999999898888
Q ss_pred HHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch
Q 012159 355 CLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT 407 (470)
Q Consensus 355 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~ 407 (470)
.....+.|.+...|.+ ...+.+.....++.+++.++.++++||+|+|+....
T Consensus 244 ~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~ 295 (428)
T PF13347_consen 244 MNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYII 295 (428)
T ss_pred hhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhh
Confidence 8888899998888876 566777888899999999999999999999997765
No 109
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.75 E-value=1.4e-21 Score=194.50 Aligned_cols=283 Identities=19% Similarity=0.232 Sum_probs=190.5
Q ss_pred HHHHHHHhhhhhHHHhHHhhh--hhcCCC---------chhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHH
Q 012159 121 LAFVICNMDKVNLSVAIIPMS--HRFGWN---------SSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIW 189 (470)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~--~~~g~s---------~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 189 (470)
++.+..+++...++...+... ..++.+ ..+.+++.+...++..+|.+++|.++||+|||+.+.++.++.
T Consensus 7 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~ 86 (451)
T PF00083_consen 7 LGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLM 86 (451)
T ss_pred HHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccccc
Confidence 344555666655555544432 222222 235688999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh---HHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhccc
Q 012159 190 SLATALLPLLAG---FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL 266 (470)
Q Consensus 190 ~~~~~~~~~~~~---~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 266 (470)
.++.++.+ .++ +++.+.++|++.|++.|...+....++.|..|+++|++..++.+.+..+|..++..++..+....
T Consensus 87 ~i~~~~~~-~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 165 (451)
T PF00083_consen 87 IIGSILIA-FAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYS 165 (451)
T ss_pred cccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99988775 455 67999999999999999999999999999999999999999999999999999888876554433
Q ss_pred ---CchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhh-----hhhhhHHhhhcc-----CCCCCHHHHh
Q 012159 267 ---GWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKK-----SLSASLEEMGES-----LKDVPWKAIF 333 (470)
Q Consensus 267 ---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-----~~~~~~~~~~ 333 (470)
+||..+++.+++.++..+..+++||+++.-..+.+.++.....++ ..+++.++..+. ..+..+++++
T Consensus 166 ~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 245 (451)
T PF00083_consen 166 DNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLF 245 (451)
T ss_pred ccccccccccccccccccccccccccccccceecccccccccccccccccccccccccccccccccccccccceeeeecc
Confidence 499999999988877777778888887764333322221111111 000111111110 1113456677
Q ss_pred cCHH----HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch
Q 012159 334 RSKA----VWAMIYAHFCG-SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT 407 (470)
Q Consensus 334 ~~~~----~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~ 407 (470)
+++. +.......++. ..+......+.+.+++ ..|.+.. -.......+...++.++..++.||+|||+....
T Consensus 246 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~ 321 (451)
T PF00083_consen 246 RNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFE-NAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLII 321 (451)
T ss_pred cccccccccccccccccccccccccccccccccccc-ccccccc--ccccccccccccccccccccccccccccccccc
Confidence 6643 22222222222 2222334445555554 4566665 223344556666777777899999999976554
No 110
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.73 E-value=1.7e-15 Score=151.12 Aligned_cols=265 Identities=12% Similarity=0.061 Sum_probs=176.9
Q ss_pred HHHHHHHhhhhhHHHhHH-hhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhh----hhcC-cHHHHHHHHHHHHHHH
Q 012159 121 LAFVICNMDKVNLSVAII-PMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAK----IFGG-RKVLQTGVLIWSLATA 194 (470)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~g~-r~~~~~~~~~~~~~~~ 194 (470)
++.+...+....+..+++ .+.+.+|+++.++|.+..+..+..++..++.|.++| |+|| |+.++++....+++..
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~ 92 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLF 92 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHH
Confidence 344444444555555544 467778999999999999999999999999999999 5698 5566667777666655
Q ss_pred HHHHhhh------HHHHHHHHHHHHHhhccCchhhHHHHhhhcc-CccchhhHHHHHHhhhhhHHHHHHhhHHhhhc---
Q 012159 195 LLPLLAG------FMPGLVLSRVLVGIGEGVSPSAATDLIARSI-PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE--- 264 (470)
Q Consensus 195 ~~~~~~~------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~--- 264 (470)
++ +..+ .+..+++..++.+++.....+...++..++. ++++|.+..++...+.++|+.+++.+...+.+
T Consensus 93 ll-f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g 171 (473)
T PRK10429 93 LL-FSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVG 171 (473)
T ss_pred HH-HcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 55 3321 1234555666778888888888899999998 68899999998777777776666555443322
Q ss_pred ----ccCchHHHHHHHHHHHHHHHHHHh-hccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHH
Q 012159 265 ----NLGWESVFYIFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVW 339 (470)
Q Consensus 265 ----~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (470)
..+|+...++.+++.++..+..++ .+|+......+..++++ ..-...++.+++||.++
T Consensus 172 ~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~n~~~~ 234 (473)
T PRK10429 172 GGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAEGSH-----------------LTLKDIVALIYKNDQLS 234 (473)
T ss_pred CCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCccccccccccC-----------------CCHHHHHHHHhcCHHHH
Confidence 124666666666665544433333 33332111100000000 00011235567899998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 012159 340 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (470)
Q Consensus 340 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~ 404 (470)
.+++..++..........+.+.|.+...+ +....+.+.....++.+++.++.+++.||+|+|+.
T Consensus 235 ~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~ 298 (473)
T PRK10429 235 CLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRIL 298 (473)
T ss_pred HHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHH
Confidence 88888888877777776777766654433 45566677777778899999999999999999974
No 111
>PRK09848 glucuronide transporter; Provisional
Probab=99.72 E-value=1.9e-15 Score=150.15 Aligned_cols=264 Identities=10% Similarity=0.035 Sum_probs=163.4
Q ss_pred HHHHHHHhhhhhHHHh-HHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhh----cCcHHH-HHHHHHHHHHHH
Q 012159 121 LAFVICNMDKVNLSVA-IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF----GGRKVL-QTGVLIWSLATA 194 (470)
Q Consensus 121 ~~~~~~~~~~~~~~~~-~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----g~r~~~-~~~~~~~~~~~~ 194 (470)
++.+...+......++ .+++.+.+|++..++|.+.++..+..++..++.|+++||. |||+.. .++.+...+..+
T Consensus 15 ~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~ 94 (448)
T PRK09848 15 LGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSV 94 (448)
T ss_pred cchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHH
Confidence 3444444444444444 4457777899999999999999999999999999999996 666644 555444444333
Q ss_pred HHHHhh------hHHHHHHHHHHHHHhhccCchhhHHHHhhhcc-CccchhhHHHHHHhhh-----hhHHHHHHhhHHhh
Q 012159 195 LLPLLA------GFMPGLVLSRVLVGIGEGVSPSAATDLIARSI-PLEERSRAVSFVFGGL-----SFGSVAGLLLAPPI 262 (470)
Q Consensus 195 ~~~~~~------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~-----~~g~~~g~~~~~~l 262 (470)
++.... ......++..++.+++.+...+...++..+.. ++++|.+..++-..+. .++..++|.+++..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~ 174 (448)
T PRK09848 95 LVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSS 174 (448)
T ss_pred HHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 321111 11223344556678777777777777777666 4467888776655433 34555666665543
Q ss_pred hccc--CchHHHHHHHHHHHHHHHHH-HhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHH
Q 012159 263 IENL--GWESVFYIFGLLGIAWFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVW 339 (470)
Q Consensus 263 ~~~~--g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (470)
.... +|.....+.+++.++..++. ...+|+.+.+ . ++.. ....++.+++||.++
T Consensus 175 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~-~---~~~~-------------------~~~~~~~l~~n~~f~ 231 (448)
T PRK09848 175 PEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRI-V---AQPS-------------------LKISLQTLKRNRPLF 231 (448)
T ss_pred CCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCC-c---cCCC-------------------HHHHHHHHhCCchHH
Confidence 2111 12111122222222222222 1222221110 0 0000 011256789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch
Q 012159 340 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT 407 (470)
Q Consensus 340 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~ 407 (470)
...+..++...+........|.|+++.+|.++...++......++.+++.++.+++.||+++|+....
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~ 299 (448)
T PRK09848 232 MLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLI 299 (448)
T ss_pred HHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 99888888888888888888888888888877666655555567788899999999999998876553
No 112
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.70 E-value=3.9e-16 Score=155.40 Aligned_cols=290 Identities=16% Similarity=0.173 Sum_probs=226.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHH
Q 012159 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (470)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (470)
...+.++.+..+...+....+...+..+.+.|+++..+.|++.+.+-++..+...+..+..-|..|-+++-++.++++++
T Consensus 96 k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lg 175 (735)
T KOG3626|consen 96 KMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLG 175 (735)
T ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHH
Confidence 34566677777777777777777788899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh-------------------h--------------------------------HHHHHHHHHHHHHhhccCch
Q 012159 193 TALLPLLA-------------------G--------------------------------FMPGLVLSRVLVGIGEGVSP 221 (470)
Q Consensus 193 ~~~~~~~~-------------------~--------------------------------~~~~l~~~~~l~G~~~~~~~ 221 (470)
.+++++-. + .+..++++.++.|+|....+
T Consensus 176 sll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~ 255 (735)
T KOG3626|consen 176 SLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIF 255 (735)
T ss_pred HHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCc
Confidence 98875321 0 12257788899999999999
Q ss_pred hhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhccc------------------C-chHHHHHHHHHHHHH
Q 012159 222 SAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL------------------G-WESVFYIFGLLGIAW 282 (470)
Q Consensus 222 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------------------g-~~~~~~~~~~~~~~~ 282 (470)
+...+++-|...+++-...+|+......+|.++|-++++++...+ | |+..|++.+.+.++.
T Consensus 256 tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~ 335 (735)
T KOG3626|consen 256 TLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFS 335 (735)
T ss_pred cCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999886432 2 677788888888888
Q ss_pred HHHHHhhccCCCCCCCCCCCccc-hhhhhhhhhhhHHhhhcc--CCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Q 012159 283 FSGFKILQEGETSNGATLAPRSN-YINMKKSLSASLEEMGES--LKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWL 359 (470)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 359 (470)
.+.++++|++.+...+....++. ....+....+......+. .-...++++++||.+....+...+....+.++.+|+
T Consensus 336 a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFl 415 (735)
T KOG3626|consen 336 AVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFL 415 (735)
T ss_pred HHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhh
Confidence 88888888776654332111110 000000000000000000 011235788999999999999999999999999999
Q ss_pred HHHHHHHhCCCchhhHHHHHHHHH-HHHHHHHHHHHHHHHHHhc
Q 012159 360 PTYFSEELSLNLTEAAWVSILPPL-ASVLVTSIAAQFADNLIAT 402 (470)
Q Consensus 360 ~~~~~~~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~~~~ 402 (470)
|-|++.++|.++..+..+.....+ +..+|.+++|++.+|+..+
T Consensus 416 PKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~ 459 (735)
T KOG3626|consen 416 PKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLS 459 (735)
T ss_pred HHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeeccc
Confidence 999999999999999988866665 5677888899999988755
No 113
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.68 E-value=3.4e-14 Score=131.84 Aligned_cols=287 Identities=17% Similarity=0.117 Sum_probs=214.2
Q ss_pred chhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHH-HHHHHHHHhhh--HHHHHHHHHHHHHhhccCchhhH
Q 012159 148 SSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS-LATALLPLLAG--FMPGLVLSRVLVGIGEGVSPSAA 224 (470)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~-~~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~ 224 (470)
.+..+...++..+..++.+++.|.++|+.|+||.....+...+ +..+++.+.++ +++..++..++..++........
T Consensus 57 ~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfy 136 (438)
T COG2270 57 TAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFY 136 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheeh
Confidence 3457888899999999999999999999997776655444433 34444444445 56677777888899999999999
Q ss_pred HHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhH--Hhh-h---------------cccCchHHHHHHHHHHHHHHHHH
Q 012159 225 TDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA--PPI-I---------------ENLGWESVFYIFGLLGIAWFSGF 286 (470)
Q Consensus 225 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--~~l-~---------------~~~g~~~~~~~~~~~~~~~~~~~ 286 (470)
.+++.+..++++-++..++-.....+|+.+.-++. +.+ . +...-|.++.+.++-.++..+..
T Consensus 137 ds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm 216 (438)
T COG2270 137 DSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPM 216 (438)
T ss_pred hhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHH
Confidence 99999999999889888887777777766654432 111 1 12245777888777766665555
Q ss_pred HhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012159 287 KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE 366 (470)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 366 (470)
+...++.+... . +..+ ......++. ..+++++.+++.+..+++..+++.-+..++..+...|..+.
T Consensus 217 ~~~v~~~~~~~-~--~~~~--~l~~g~k~L---------~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~ 282 (438)
T COG2270 217 ILNVHDAEKIS-S--PPPT--ALRNGFKEL---------KSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAAD 282 (438)
T ss_pred Hhccccccccc-c--cchH--HHHHHHHHH---------HHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 44443333211 0 0000 000111111 12357788888999999999999999999999999999989
Q ss_pred hCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch---------------------------------------
Q 012159 367 LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT--------------------------------------- 407 (470)
Q Consensus 367 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~--------------------------------------- 407 (470)
+|++..+..++.....+.+++|+++.|++.||++.|+.+..
T Consensus 283 ~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~S 362 (438)
T COG2270 283 LGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASS 362 (438)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHH
Confidence 99999999999999999999999999999999999977665
Q ss_pred ----------------HHHHHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHHHHH
Q 012159 408 ----------------MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFY 448 (470)
Q Consensus 408 ----------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~ 448 (470)
+|+++..+...+.+||++.+.+.+.++..+..+..+.++..
T Consensus 363 RSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~ 419 (438)
T COG2270 363 RSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLL 419 (438)
T ss_pred HHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence 99999999999999999999999999987776666544433
No 114
>PRK11462 putative transporter; Provisional
Probab=99.67 E-value=5.3e-14 Score=139.54 Aligned_cols=261 Identities=11% Similarity=0.020 Sum_probs=174.2
Q ss_pred HHHHHHhhhhhHHHh-HHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhh----hcCcH-HHHHHHHHHHHHHHH
Q 012159 122 AFVICNMDKVNLSVA-IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI----FGGRK-VLQTGVLIWSLATAL 195 (470)
Q Consensus 122 ~~~~~~~~~~~~~~~-~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~g~r~-~~~~~~~~~~~~~~~ 195 (470)
+-+.........+.+ ...+.+.+|+++..+|.+..+.-+.-++..|+.|.++|| +|||| .++++...++++.++
T Consensus 17 g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~l 96 (460)
T PRK11462 17 GDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVL 96 (460)
T ss_pred chhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHH
Confidence 333334444444444 444778889999999999999999999999999999996 68765 455566677776655
Q ss_pred HHHhhhH------HHHHHHHHHHHHhhccCchhhHHHHhhhccC-ccchhhHHHHHHhhhhhHHHHHHhhHHhhhccc--
Q 012159 196 LPLLAGF------MPGLVLSRVLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-- 266 (470)
Q Consensus 196 ~~~~~~~------~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-- 266 (470)
+ +..+. ...+.+..++..++.........++.+++.+ +++|.+..++...+..+|..+++.+...+....
T Consensus 97 l-f~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~ 175 (460)
T PRK11462 97 A-YSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGG 175 (460)
T ss_pred H-HhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 5 32221 2345556666788888888888899999884 789999999999999999888877765554432
Q ss_pred -----CchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHH
Q 012159 267 -----GWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAM 341 (470)
Q Consensus 267 -----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (470)
+|+....+.+++.++...+++...+++++.+. ++.. -...++..++||.++.+
T Consensus 176 ~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~---~~~~-------------------~~~~l~~~~~Nk~~~~l 233 (460)
T PRK11462 176 DNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPP---TTTS-------------------MREDLRDIWQNDQWRIV 233 (460)
T ss_pred CchhhhHHHHHHHHHHHHHHHHHHHHhcceeccCCCc---cCCC-------------------HHHHHHHHhCChHHHHH
Confidence 46766666666655554443332222111110 0000 01124677889988877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 012159 342 IYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVET 406 (470)
Q Consensus 342 ~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~ 406 (470)
....++..............|.+..+|. +...+.+.....++.+++.++++++.||+++|+...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~ 297 (460)
T PRK11462 234 GLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFW 297 (460)
T ss_pred HHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHH
Confidence 6666666555555545555555544443 334456677788888999999999999999887543
No 115
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.66 E-value=9e-14 Score=133.13 Aligned_cols=270 Identities=14% Similarity=0.127 Sum_probs=198.6
Q ss_pred HHHHHHHHHhhhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhh----hcCcH-HHHHHHHHHHHH
Q 012159 119 TSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI----FGGRK-VLQTGVLIWSLA 192 (470)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~g~r~-~~~~~~~~~~~~ 192 (470)
-.++-+...........++.. +.+.+|+++..+|.++.+.-+--++..|+.|.++|| +||+| .++.+.+.+++.
T Consensus 17 Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~ 96 (467)
T COG2211 17 YGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIV 96 (467)
T ss_pred hcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHH
Confidence 334444444555555555554 778899999999999999999999999999999995 67644 556666777777
Q ss_pred HHHHHHhhh------HHHHHHHHHHHHHhhccCchhhHHHHhhhcc-CccchhhHHHHHHhhhhhHHHHHHhhHHhhhc-
Q 012159 193 TALLPLLAG------FMPGLVLSRVLVGIGEGVSPSAATDLIARSI-PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE- 264 (470)
Q Consensus 193 ~~~~~~~~~------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~- 264 (470)
+.++ +.++ .....++..++.+++.........++.+++. +++||.+..++-+.+..+|..+...+.+.+..
T Consensus 97 ~~l~-F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~ 175 (467)
T COG2211 97 AVLL-FITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKL 175 (467)
T ss_pred HHHH-HcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7666 3333 2345667778889999999999999999988 56899999999999999987777666655553
Q ss_pred ------ccCchHHHHHHHHHHHHHHHHHHhh-ccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHH
Q 012159 265 ------NLGWESVFYIFGLLGIAWFSGFKIL-QEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKA 337 (470)
Q Consensus 265 ------~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (470)
..||+...++.+++.++..+.+++- +|+..+....+..... .....+..+++||+
T Consensus 176 ~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~~------------------~~~~~~~~~~~Nrp 237 (467)
T COG2211 176 FGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVKL------------------KLKDSFLLIFKNRP 237 (467)
T ss_pred hCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcccccc------------------cHHHHHHHHHccch
Confidence 3467777777777776665555444 3333211111110000 00112346789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch
Q 012159 338 VWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT 407 (470)
Q Consensus 338 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~ 407 (470)
+...++..++...+..........|.+..+|.+.............+.+++.++..++.+|+|+|+....
T Consensus 238 ~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~ 307 (467)
T COG2211 238 LLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLI 307 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHH
Confidence 9999998888888888888888888888888888888888888888888889999999999999987765
No 116
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.65 E-value=1.5e-17 Score=165.72 Aligned_cols=287 Identities=16% Similarity=0.215 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHH
Q 012159 116 IGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATAL 195 (470)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 195 (470)
+..+++..++..+........+..+.++|+++..+.|++.+.+-++..+..++..++.+|..|-+++.++.++++++.++
T Consensus 5 l~~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l 84 (539)
T PF03137_consen 5 LVFLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLL 84 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHH
Confidence 34455555566666666667788899999999999999999999999999999999999999999999999999999887
Q ss_pred HHHhh---h----------------------------------------------HHHHHHHHHHHHHhhccCchhhHHH
Q 012159 196 LPLLA---G----------------------------------------------FMPGLVLSRVLVGIGEGVSPSAATD 226 (470)
Q Consensus 196 ~~~~~---~----------------------------------------------~~~~l~~~~~l~G~~~~~~~~~~~~ 226 (470)
+++-. + .+..++++.++.|+|....++...+
T Consensus 85 ~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~t 164 (539)
T PF03137_consen 85 FALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGIT 164 (539)
T ss_dssp -------------------------------------------------------------------SSS----------
T ss_pred HhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceee
Confidence 64210 0 1235788899999999999999999
Q ss_pred HhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhccc---------------------C-chHHHHHHHHHHHHHHH
Q 012159 227 LIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL---------------------G-WESVFYIFGLLGIAWFS 284 (470)
Q Consensus 227 ~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~---------------------g-~~~~~~~~~~~~~~~~~ 284 (470)
++-|..++++-+..+|++.....+|.++|-++++.+...+ | |...|++.+++.++..+
T Consensus 165 YiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~ai 244 (539)
T PF03137_consen 165 YIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAI 244 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998876421 3 66777778888877777
Q ss_pred HHHhhccCCCCCCCCCCCccc-hhhhhhhhhhh-HHhh-------hccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHH
Q 012159 285 GFKILQEGETSNGATLAPRSN-YINMKKSLSAS-LEEM-------GESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTC 355 (470)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 355 (470)
.++.+|++-+...+....++. .....+...+. .++. .-+.-....+++++||.+....+......+...++
T Consensus 245 pl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~ 324 (539)
T PF03137_consen 245 PLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGF 324 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence 778887765544111111000 00000000000 0000 01112234678999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCchhhHHHHHHHHH-HHHHHHHHHHHHHHHHHhc
Q 012159 356 LSWLPTYFSEELSLNLTEAAWVSILPPL-ASVLVTSIAAQFADNLIAT 402 (470)
Q Consensus 356 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~~~~ 402 (470)
.++.|.|++.+++.++.+++++.....+ ++++|.+++|++.+|++.+
T Consensus 325 ~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~ 372 (539)
T PF03137_consen 325 ATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLS 372 (539)
T ss_dssp ------------------------------------------------
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCc
Confidence 9999999999999999999888766665 6788999999999998754
No 117
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.63 E-value=8.6e-13 Score=125.36 Aligned_cols=177 Identities=18% Similarity=0.288 Sum_probs=143.9
Q ss_pred HHHHHHHHHHHHhhhhhHHHh-HHhhhhhcC----CCchhhHHHHHHHHHHHHHhhhhhHHHhhhh-cCcHHHHHHHHHH
Q 012159 116 IGTTSLAFVICNMDKVNLSVA-IIPMSHRFG----WNSSVAGLVQSSFFWGYALSQLPGGWLAKIF-GGRKVLQTGVLIW 189 (470)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g----~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~ 189 (470)
+..++..-+..-+..+.+... .-++..+++ ++.+++.-+++.|..-.-+..+++|+++||+ |+|+++.++.+++
T Consensus 23 l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~ 102 (498)
T COG3104 23 LYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILM 102 (498)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Confidence 344444555555544444444 333445555 9999999899988888889999999999995 9999999999999
Q ss_pred HHHHHHHHHhh-hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCcc--chhhHHHHHHhhhhhHHHHHHhhHHhhhccc
Q 012159 190 SLATALLPLLA-GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE--ERSRAVSFVFGGLSFGSVAGLLLAPPIIENL 266 (470)
Q Consensus 190 ~~~~~~~~~~~-~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 266 (470)
+++.++++... .....+++..++.++|.|..-+...+++.|.+|++ +|-..+++++.+.++|+.++|++.+++.+.+
T Consensus 103 ~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~ 182 (498)
T COG3104 103 AIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINY 182 (498)
T ss_pred HHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhh
Confidence 99998886443 34567888888999999999999999999999765 4678889999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHhhccC
Q 012159 267 GWESVFYIFGLLGIAWFSGFKILQEG 292 (470)
Q Consensus 267 g~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (470)
||...|.+.++-..+.++.++..++.
T Consensus 183 g~~~gF~~aavGm~~gl~~f~~~~r~ 208 (498)
T COG3104 183 GWHVGFGLAAVGMIIGLVIFLLGRRH 208 (498)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHccch
Confidence 99999999998887777777666543
No 118
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.63 E-value=6.3e-15 Score=144.54 Aligned_cols=159 Identities=19% Similarity=0.254 Sum_probs=128.3
Q ss_pred hHHHhHHhhhhhcCCCc--------hhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhh--
Q 012159 132 NLSVAIIPMSHRFGWNS--------SVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAG-- 201 (470)
Q Consensus 132 ~~~~~~~~~~~~~g~s~--------~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~-- 201 (470)
......+.+.++.|.++ ...+...++..+...++.++.|+++||+|+|+++.++.++.+++..+......
T Consensus 226 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~ 305 (418)
T TIGR00889 226 ITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEY 305 (418)
T ss_pred HHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcch
Confidence 34445566556666543 66799999999999999999999999999999999999888877655543222
Q ss_pred -HHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHH-hhhhhHHHHHHhhHHhhhcc------cCchHHHH
Q 012159 202 -FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVF-GGLSFGSVAGLLLAPPIIEN------LGWESVFY 273 (470)
Q Consensus 202 -~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~------~g~~~~~~ 273 (470)
+++.+++.+++.|++.+...+....++.+++|+++|++++|+.+ ...++|.++||+++|++.++ +||+..|+
T Consensus 306 ~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~ 385 (418)
T TIGR00889 306 FGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWL 385 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHH
Confidence 23567778999999998888898999999999999999999997 67889999999999999987 46999999
Q ss_pred HHHHHHHHHHHHHHhhc
Q 012159 274 IFGLLGIAWFSGFKILQ 290 (470)
Q Consensus 274 ~~~~~~~~~~~~~~~~~ 290 (470)
+.+++.++..+..+++.
T Consensus 386 ~~~~~~~i~~~l~~~~~ 402 (418)
T TIGR00889 386 FFAGYIAILAVLFMIFF 402 (418)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 88888766655544443
No 119
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.61 E-value=4.2e-13 Score=123.10 Aligned_cols=249 Identities=15% Similarity=0.081 Sum_probs=175.8
Q ss_pred hhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 012159 128 MDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLV 207 (470)
Q Consensus 128 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 207 (470)
..-...+++.-.+.+++|++..|++.++....+...+...+.|.++||+|||+..++.+++.++.++.. ..++++.++
T Consensus 48 ~aDWLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k--~~~~~~~L~ 125 (354)
T PF05631_consen 48 AADWLQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK--HSSNYPVLL 125 (354)
T ss_pred HHHHhhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH--hccccHHHH
Confidence 333445556555667899999999999999999999999999999999999999999999998888654 456679999
Q ss_pred HHHHHHHhhccCchhhHHHHhhhc-----cCccchhhHHHHHH-hhhhhHHHHHHhhHHhhhcccCc--hHHHHHHHHHH
Q 012159 208 LSRVLVGIGEGVSPSAATDLIARS-----IPLEERSRAVSFVF-GGLSFGSVAGLLLAPPIIENLGW--ESVFYIFGLLG 279 (470)
Q Consensus 208 ~~~~l~G~~~~~~~~~~~~~i~~~-----~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~g~--~~~~~~~~~~~ 279 (470)
++|++.|++.+..+.+..++...- +|++..+..++... ...++-.+++.+++.++.+..+. ..+|....++.
T Consensus 126 ~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l 205 (354)
T PF05631_consen 126 LGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLL 205 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHH
Confidence 999999999999998888877533 33333444455444 33445566667777777776554 78888887777
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Q 012159 280 IAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWL 359 (470)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 359 (470)
++..++.....++...+..+..+..+. . ...++.+.+||+++.+.+...++-...+.+....
T Consensus 206 ~~~~~~I~~~W~ENyg~~~~~~~~~~~---~---------------~~a~~~i~~d~ril~LG~~qslFE~smy~FVflW 267 (354)
T PF05631_consen 206 AVAAVLILKTWPENYGDTSSSSSLSGS---F---------------REAWRAILSDPRILLLGLIQSLFEGSMYLFVFLW 267 (354)
T ss_pred HHHHHHHHhcccccCCCcccccchHHH---H---------------HHHHHHHHcCchhHHHHHHHHHHHHHHHHheeee
Confidence 666555443333322211111000000 0 0124677889999999999999988888877655
Q ss_pred HHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012159 360 PTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADN 398 (470)
Q Consensus 360 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr 398 (470)
++-++. +-.....|++++.+.++.++|+.+..++..+
T Consensus 268 tPaL~~--~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 268 TPALDP--DDEELPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred eceecC--CCCCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 555542 1123457899999999999999888766554
No 120
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.60 E-value=6.5e-13 Score=127.57 Aligned_cols=250 Identities=17% Similarity=0.174 Sum_probs=167.4
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhh--cCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcC-cHHHHHHHHH
Q 012159 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHR--FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGG-RKVLQTGVLI 188 (470)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~-r~~~~~~~~~ 188 (470)
+|+.+.+..+..++.....+++.+..-.+.++ .+.+.+..|++.++..++.+++++.+|++..|.+. |+.++.+.++
T Consensus 32 ~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii 111 (488)
T KOG2325|consen 32 NWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLI 111 (488)
T ss_pred chHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHH
Confidence 46788888888888888877777764444444 78888999999999999999999999999999986 8888888888
Q ss_pred HHHHHHHHHH---hhh-HHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhc
Q 012159 189 WSLATALLPL---LAG-FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE 264 (470)
Q Consensus 189 ~~~~~~~~~~---~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 264 (470)
..++.++... .++ .-+.++++|++.|+|.+.. ...-+++++....++|.++++....+..+|.++||.+...+..
T Consensus 112 ~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~ 190 (488)
T KOG2325|consen 112 AIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNF-AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTP 190 (488)
T ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhh
Confidence 8888876622 234 5678999999999997654 6778899998877999999999999888888888877766543
Q ss_pred cc--C-----------chHHHHHHHHHHHHHHHHHHhh-ccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHH
Q 012159 265 NL--G-----------WESVFYIFGLLGIAWFSGFKIL-QEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWK 330 (470)
Q Consensus 265 ~~--g-----------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (470)
.. | +..+-|+.+++.++.++..++. +|..+....+..+.++ + ...+....+..+..+
T Consensus 191 Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~~-----~---~~~~~~~~~~~~~d~- 261 (488)
T KOG2325|consen 191 LGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSVE-----E---EKSDIEKVKKPKLDW- 261 (488)
T ss_pred hcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccch-----h---hccchhhhccCChhH-
Confidence 11 1 3456677777776665554444 4433322221111110 0 000000001111111
Q ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHH
Q 012159 331 AIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAW 376 (470)
Q Consensus 331 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~ 376 (470)
...+.+.+..+...+......+..+......++++..++-.
T Consensus 262 -----~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~ 302 (488)
T KOG2325|consen 262 -----VAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVL 302 (488)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHH
Confidence 22334445555555555555666667766677877665543
No 121
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.59 E-value=1.3e-13 Score=138.40 Aligned_cols=170 Identities=12% Similarity=0.090 Sum_probs=126.7
Q ss_pred HHhhhhhHHHhHHhhh-hhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHH-HH-HhhhH
Q 012159 126 CNMDKVNLSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATAL-LP-LLAGF 202 (470)
Q Consensus 126 ~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~-~~-~~~~~ 202 (470)
.....+....++|.+. +.+|.+..+.++..+...++..++.+++|+++||+|||+++.++.++..++... +. ...++
T Consensus 262 ~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (490)
T PRK10642 262 TNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNV 341 (490)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3344445555677654 567998888888888889999999999999999999999988876644433322 11 12334
Q ss_pred HHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccC-chHHHHHHHHHHHH
Q 012159 203 MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVFYIFGLLGIA 281 (470)
Q Consensus 203 ~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-~~~~~~~~~~~~~~ 281 (470)
...+++.+++.|++.+........++.+.+|++.|++++|+.+....+++.++|.+.+++.+..+ |+.++++..+.+++
T Consensus 342 ~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i 421 (490)
T PRK10642 342 IGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVI 421 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 56677788888887777777778888999999999999998555566777899999999887654 77777776666666
Q ss_pred HHHHHHhhccCCCC
Q 012159 282 WFSGFKILQEGETS 295 (470)
Q Consensus 282 ~~~~~~~~~~~~~~ 295 (470)
.++..++++|+++.
T Consensus 422 ~~~~~~~~pes~~~ 435 (490)
T PRK10642 422 GLITGVTMKETANR 435 (490)
T ss_pred HHHHHHHhccccCC
Confidence 66666777776654
No 122
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.58 E-value=1.6e-13 Score=133.94 Aligned_cols=157 Identities=16% Similarity=0.109 Sum_probs=125.4
Q ss_pred hHHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 012159 132 NLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSR 210 (470)
Q Consensus 132 ~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 210 (470)
.+....|. +.+++|.+..+.+++.+...++..++.+++|+++||+|+|+.+..+.+...+..... ...++.+.+++.+
T Consensus 234 ~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~ 312 (393)
T PRK15011 234 LYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGM-LMAHSPAILLGLQ 312 (393)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH-HHHhhHHHHHHHH
Confidence 34445665 556789999999999888888888899999999999999998877665544443333 2345556677788
Q ss_pred HHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHHHHHhhc
Q 012159 211 VLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQ 290 (470)
Q Consensus 211 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 290 (470)
++.+++.+...+....+..|.+| ++|++++++++....+|..++|.++|.+.+++||+..|++.+++.++.++..+..+
T Consensus 313 ~l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 391 (393)
T PRK15011 313 LLNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRIK 391 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhc
Confidence 88888777777777788888888 56999999999999999999999999999999999999988888777777666654
No 123
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.57 E-value=2.2e-13 Score=133.35 Aligned_cols=160 Identities=21% Similarity=0.149 Sum_probs=130.2
Q ss_pred hHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 012159 132 NLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRV 211 (470)
Q Consensus 132 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 211 (470)
....+++.+.++.|. .+.++..+.+.++..++.++.|++.||+|+|+.+..+.++.+++.++... .++.+.+++..+
T Consensus 234 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 310 (399)
T PRK05122 234 TIATFITLYYAARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWL-APSPWMALIGAA 310 (399)
T ss_pred HHHHHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHH
Confidence 344445555555565 34567778888999999999999999999999998888877777766643 455567778889
Q ss_pred HHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHHHHHhhcc
Q 012159 212 LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQE 291 (470)
Q Consensus 212 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 291 (470)
+.|++.+...+.....+.+.+|+++|++++++++....+|..++|++.|.+.++.||++.|++.+++.++..+..+.+++
T Consensus 311 l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 311 LTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999998888888888899999999999999999999999999999999999999999999988887777666666655
Q ss_pred CCC
Q 012159 292 GET 294 (470)
Q Consensus 292 ~~~ 294 (470)
+++
T Consensus 391 ~~~ 393 (399)
T PRK05122 391 RAP 393 (399)
T ss_pred ccc
Confidence 443
No 124
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.56 E-value=5.4e-14 Score=136.22 Aligned_cols=150 Identities=16% Similarity=0.124 Sum_probs=125.4
Q ss_pred HHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHH
Q 012159 133 LSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAG-FMPGLVLSRV 211 (470)
Q Consensus 133 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~ 211 (470)
.....+.+.+++|.+..+.+++.++..++..++.++.|++.||+|||+.+.++.++.+++.+++..... ....+++..+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (377)
T TIGR00890 224 LIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVA 303 (377)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHH
Confidence 334455566788999999999999999999999999999999999999999888887777765543322 2233445677
Q ss_pred HHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHH
Q 012159 212 LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAW 282 (470)
Q Consensus 212 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~ 282 (470)
+.|++.+...+....++.|.+|+++|++++|+.+....+|..++|.++|.+.++.||++.|++.+++.++.
T Consensus 304 ~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 304 LVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 78888888888888899999999999999999999999999999999999999999999999988776654
No 125
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.56 E-value=2.9e-12 Score=119.51 Aligned_cols=241 Identities=19% Similarity=0.197 Sum_probs=175.5
Q ss_pred hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhc-----CcHHHHH-HHHHHHHHHHHHHH----hhh--------
Q 012159 140 MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFG-----GRKVLQT-GVLIWSLATALLPL----LAG-------- 201 (470)
Q Consensus 140 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g-----~r~~~~~-~~~~~~~~~~~~~~----~~~-------- 201 (470)
+..|++++....+.+.++..+.. ...+.+|..+|+.+ ||..+++ +.++.+.+..+.+. ...
T Consensus 6 MIvEL~vpA~lv~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 56789999999999998888776 57999999999998 7766655 44444444333322 112
Q ss_pred H-H--HHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHH---H
Q 012159 202 F-M--PGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYI---F 275 (470)
Q Consensus 202 ~-~--~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~---~ 275 (470)
. . ....+...+.|+|.+...+...++++|..|+++|+++.++.....-+|.+++..+.+.+.+.+......-+ .
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~ 164 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGV 164 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHH
Confidence 1 1 13455667889999999999999999999999999999999999999999999999999887764332222 3
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHH
Q 012159 276 GLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTC 355 (470)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 355 (470)
+++.++..++..+-.|++..+.....++++ ......+++++.+|+...+.+..++...+++.-
T Consensus 165 a~i~~~l~~ia~wg~E~r~~~~~~~~~~~~-----------------~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~Q 227 (403)
T PF03209_consen 165 ALIALLLNLIALWGQEPRRSRRAAAAERPR-----------------PPFREAWRQVWASPQARRFFVFLFLGTLAFFMQ 227 (403)
T ss_pred HHHHHHHHHHHHHhcccCCcccccCCCCCC-----------------ccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhh
Confidence 333322222223323333222221111111 001123567788899988988889999998888
Q ss_pred HHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012159 356 LSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADN 398 (470)
Q Consensus 356 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr 398 (470)
...+-+|--+.+|++..+...+......+..++....|++..|
T Consensus 228 D~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~ 270 (403)
T PF03209_consen 228 DVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSR 270 (403)
T ss_pred HHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999998774
No 126
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.55 E-value=1.8e-13 Score=134.32 Aligned_cols=160 Identities=23% Similarity=0.080 Sum_probs=127.5
Q ss_pred hhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 012159 130 KVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLS 209 (470)
Q Consensus 130 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 209 (470)
........|.+.++.|.+..+.+.+.+...++..++.++.|++.||+|+|+.+..+.+..+++.++.. ..++.+.+.+.
T Consensus 236 ~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 314 (406)
T PRK11551 236 LYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALA-AAPSFAGMLLA 314 (406)
T ss_pred HHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-hcCcHHHHHHH
Confidence 33444557777788899999999999999999999999999999999999998887666666555443 33444666677
Q ss_pred HHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccC-chHHHHHHHHHHHHHHHHHHh
Q 012159 210 RVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVFYIFGLLGIAWFSGFKI 288 (470)
Q Consensus 210 ~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~ 288 (470)
.++.|++.+...+...+++.+.+|+++|++++|+.+....+|..+||.++|.+.++.+ |...+++.+...++..+..+.
T Consensus 315 ~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 315 GFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALL 394 (406)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 7888888888888889999999999999999999999999999999999999998754 555566555555555554444
Q ss_pred hc
Q 012159 289 LQ 290 (470)
Q Consensus 289 ~~ 290 (470)
+.
T Consensus 395 ~~ 396 (406)
T PRK11551 395 LV 396 (406)
T ss_pred Hh
Confidence 43
No 127
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.55 E-value=3.2e-13 Score=138.97 Aligned_cols=139 Identities=12% Similarity=0.022 Sum_probs=116.6
Q ss_pred HHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhcc
Q 012159 153 LVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSI 232 (470)
Q Consensus 153 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~ 232 (470)
+...+..++.+++.++.|+++||+|||++++++.++.+++.+++++. ++...+++.+++.|++.++.++...++++|++
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~-~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFG-NSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 44566778889999999999999999999999999988888777544 44466777788888888888999999999999
Q ss_pred CccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHHHHHhhccCC
Q 012159 233 PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGE 293 (470)
Q Consensus 233 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (470)
|.+.|++++|+.+....+|.++||++++.+.+. +...+|++.+++.++..++.+++||+.
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~LPET~ 737 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALKLPDTR 737 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 999999999999999999999999999988764 466788888877777776666776543
No 128
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.55 E-value=3.9e-14 Score=116.47 Aligned_cols=134 Identities=29% Similarity=0.508 Sum_probs=116.4
Q ss_pred HHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCc
Q 012159 155 QSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL 234 (470)
Q Consensus 155 ~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~ 234 (470)
.+.+.++..++.++.|++.||+|||+.+..+..+..++.++.. ..++.+.+.+.+++.|++.+...+....++.|.+|+
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 82 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFA-LSSNITVLIIARFLQGFGAAFALVAGAALIADIYPP 82 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCh
Confidence 3456778889999999999999999999998888877776664 445668888899999999999999999999999999
Q ss_pred cchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHHHHHhh
Q 012159 235 EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL 289 (470)
Q Consensus 235 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 289 (470)
++|++++++.+....+|..++|.+++.+.+..+|++.+++.+++.++..+..+.+
T Consensus 83 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 83 EERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFL 137 (141)
T ss_pred hhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999888776665555444
No 129
>PRK03545 putative arabinose transporter; Provisional
Probab=99.54 E-value=4.2e-13 Score=130.90 Aligned_cols=152 Identities=18% Similarity=0.094 Sum_probs=123.3
Q ss_pred HHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhh
Q 012159 137 IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIG 216 (470)
Q Consensus 137 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~ 216 (470)
.|.+.+.+|.+..+.+++.+...++..++.++.|++.||+++|+.. .+..+..++..+.....++.+.++++.++.|++
T Consensus 229 ~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~ 307 (390)
T PRK03545 229 EPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAANSEWHLSVLSIFWGIA 307 (390)
T ss_pred HHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 4445666899999999999999999999999999999999987654 444444444433333455567777888899999
Q ss_pred ccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHHHHHhhc
Q 012159 217 EGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQ 290 (470)
Q Consensus 217 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 290 (470)
.+...+.....+.+..| ++|++++|+++....+|..+||+++|.+.+++|++..|++.+++.++..+......
T Consensus 308 ~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 308 IMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 88877888888888876 68999999999999999999999999999999999999999888877666555544
No 130
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.54 E-value=4.9e-13 Score=129.62 Aligned_cols=153 Identities=16% Similarity=0.159 Sum_probs=125.0
Q ss_pred HhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 012159 135 VAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLV 213 (470)
Q Consensus 135 ~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 213 (470)
...|. +.+++|.++.+.+++.+...+...++.++.|++.||+|+|+++.++.++..+...... ..++.+.+++.+++.
T Consensus 220 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 298 (375)
T TIGR00899 220 INMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLA-ADNSLWALLMLQLLN 298 (375)
T ss_pred hhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 34444 5577899999999998888888888899999999999999998887766555444432 345557777788899
Q ss_pred HhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHHHHHhh
Q 012159 214 GIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL 289 (470)
Q Consensus 214 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 289 (470)
|++.+...+....++.|..| +++++++++++....+|..++|.++|.+.+..||+..|++.+++.++..+....+
T Consensus 299 g~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 299 AIFIGILAGIGMLYFQDLMP-GRAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred HHHHHHHHHHHHHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhee
Confidence 99888888888888999887 5677999999999999999999999999999999999999888877766665544
No 131
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.53 E-value=7.4e-14 Score=137.58 Aligned_cols=148 Identities=12% Similarity=0.047 Sum_probs=124.3
Q ss_pred hcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchh
Q 012159 143 RFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPS 222 (470)
Q Consensus 143 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~ 222 (470)
+.+.+..+.|++.++..++..++.+++|++.||+|+|+.+..+.++.+++.++.+ ..++.+.+++.+++.|++.+...+
T Consensus 256 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~-~~~~~~~~~~~~~l~g~~~~~~~~ 334 (420)
T PRK09528 256 TPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSG-FATGPLEVSILKLLHAFEVPFLLV 334 (420)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHH-hcccHHHHHHHHHHHHHHHHHHHH
Confidence 3466778889999999999999999999999999999999998888888776664 445567788889999998888778
Q ss_pred hHHHHhhhccCccchhhHHHH-HHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHHHHHhhcc
Q 012159 223 AATDLIARSIPLEERSRAVSF-VFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQE 291 (470)
Q Consensus 223 ~~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 291 (470)
....++.+.+|++.++...+. ++....+|.+++|+++|++.+..||+..|++.+++.++..++.+...+
T Consensus 335 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~ 404 (420)
T PRK09528 335 GVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLS 404 (420)
T ss_pred HHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 888899999998888887765 677788999999999999999999999999988887666555544433
No 132
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.53 E-value=4.6e-13 Score=125.71 Aligned_cols=178 Identities=17% Similarity=0.142 Sum_probs=149.7
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHH
Q 012159 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (470)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (470)
+++++..+....+.....+..+++.-|.+.+..|++...++++..++.++..++.++.|++.|| +.|+.+....++.++
T Consensus 210 ~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~ 288 (394)
T COG2814 210 RPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLAL 288 (394)
T ss_pred CchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHH
Confidence 3455555555555555666777777888999999999999999999999999999999999999 999999988888888
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHH
Q 012159 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (470)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~ 271 (470)
..+.+.+..++.+..++.-++.|+............+++ .-++.+..+.+++....++|..+|..++|.+.+++|+...
T Consensus 289 ~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~ 367 (394)
T COG2814 289 ALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAAT 367 (394)
T ss_pred HHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHH
Confidence 887777777777777777788888888777777777777 4458999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcc
Q 012159 272 FYIFGLLGIAWFSGFKILQE 291 (470)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~ 291 (470)
.++.+++.++..+..+...+
T Consensus 368 ~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 368 GWVGAALLLLALLLALLSAR 387 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999988877766655543
No 133
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.53 E-value=1.4e-13 Score=135.03 Aligned_cols=159 Identities=19% Similarity=0.159 Sum_probs=126.5
Q ss_pred hhHHHhHHhhhhhcCCCch----hhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 012159 131 VNLSVAIIPMSHRFGWNSS----VAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGL 206 (470)
Q Consensus 131 ~~~~~~~~~~~~~~g~s~~----~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l 206 (470)
....+.++.+..+.+.+.. ..+.+.++..++..++.+..|+++||+|||+.+..+.++.+++.+... ..++.+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 314 (408)
T PRK09874 236 GSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMS-FVQTPLQL 314 (408)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHH-HhccHHHH
Confidence 3344445554444333322 345666777888889999999999999999999988877766665553 33455777
Q ss_pred HHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHHHH
Q 012159 207 VLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGF 286 (470)
Q Consensus 207 ~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 286 (470)
++.+++.|++.+...+...+.+.+..+++++|+.+++++....+|..+||.++|.+.+..||++.|++.+++.++..+..
T Consensus 315 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~ 394 (408)
T PRK09874 315 GILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYS 394 (408)
T ss_pred HHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999989999999999999999999999999999999999999999998887766655
Q ss_pred Hhhc
Q 012159 287 KILQ 290 (470)
Q Consensus 287 ~~~~ 290 (470)
+...
T Consensus 395 ~~~~ 398 (408)
T PRK09874 395 WNSL 398 (408)
T ss_pred HHHH
Confidence 4433
No 134
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.53 E-value=5.1e-13 Score=129.84 Aligned_cols=162 Identities=16% Similarity=0.017 Sum_probs=136.6
Q ss_pred HHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhh
Q 012159 121 LAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA 200 (470)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 200 (470)
+..++.......+....|.+.+++|.+..++|++.++..++..+..++.+++.||+|+|+.+.++.++.++...+.+ ..
T Consensus 212 ~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~-~~ 290 (382)
T TIGR00902 212 AAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIG-AI 290 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHH-hH
Confidence 33444444455555566776678999999999999999999999999999999999999999999999888887775 46
Q ss_pred hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHH-hhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHH
Q 012159 201 GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVF-GGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLG 279 (470)
Q Consensus 201 ~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 279 (470)
++.+.+++..++.|++.+...+....++.+. |+++|++.+++++ ...++|..+||.++|++.+++|+ ..|++.+++.
T Consensus 291 ~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~ 368 (382)
T TIGR00902 291 EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIA 368 (382)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHH
Confidence 6778888899999999999999999999998 8899999999986 56789999999999999999986 6788777777
Q ss_pred HHHHHH
Q 012159 280 IAWFSG 285 (470)
Q Consensus 280 ~~~~~~ 285 (470)
++..+.
T Consensus 369 ~~~~~~ 374 (382)
T TIGR00902 369 AAAFFL 374 (382)
T ss_pred HHHHHH
Confidence 655444
No 135
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.52 E-value=1e-13 Score=128.52 Aligned_cols=180 Identities=18% Similarity=0.105 Sum_probs=145.1
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhh--cCcHHHHHHHHH
Q 012159 112 RYKLIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF--GGRKVLQTGVLI 188 (470)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--g~r~~~~~~~~~ 188 (470)
+.+.++.++++.++.++.+..+.-..|. +.|..|++...+++..+.+-++.+.+.+++|+++||+ |||....+.+.+
T Consensus 250 ~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~ 329 (448)
T COG2271 250 KNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFML 329 (448)
T ss_pred cChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHH
Confidence 4577889999999999999999988887 6677899999999999999999999999999999996 677665544433
Q ss_pred HHHHHHHHHHhhh--HHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhh-HHHHHHhhHHhhhcc
Q 012159 189 WSLATALLPLLAG--FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSF-GSVAGLLLAPPIIEN 265 (470)
Q Consensus 189 ~~~~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~~ 265 (470)
....+++.....+ ++++..++.++.|+..-+..-.......|..|++--|.+.|+...+..+ |.+.+....|++.|.
T Consensus 330 ~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~ 409 (448)
T COG2271 330 LITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADT 409 (448)
T ss_pred HHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEec
Confidence 3333333323333 4577788888889987777777777788999999999999999999999 999999999999999
Q ss_pred cCchHHHHHHHHHHHHHHHHHHhhcc
Q 012159 266 LGWESVFYIFGLLGIAWFSGFKILQE 291 (470)
Q Consensus 266 ~g~~~~~~~~~~~~~~~~~~~~~~~~ 291 (470)
+||...|++..+.+++..+.+..+..
T Consensus 410 ~gW~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 410 WGWDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHh
Confidence 99999999988877666555544433
No 136
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.52 E-value=7.9e-13 Score=126.63 Aligned_cols=165 Identities=28% Similarity=0.356 Sum_probs=142.0
Q ss_pred HHHHHhhhhhHHHhHHhhhhhc-CCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcH-HHHHHHHHHHHHHHHHHHhh
Q 012159 123 FVICNMDKVNLSVAIIPMSHRF-GWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRK-VLQTGVLIWSLATALLPLLA 200 (470)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~~~~~ 200 (470)
.+.............|.+.++. |.+..+.++..+...++..++.++.|++.||+|+|+ .+..+..+..++.+... ..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~ 262 (352)
T cd06174 184 FFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLA-LA 262 (352)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH-Hh
Confidence 3344444555556666655554 999999999999999999999999999999999999 99998888888877764 44
Q ss_pred hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHH
Q 012159 201 GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGI 280 (470)
Q Consensus 201 ~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~ 280 (470)
++.+.+++..++.|++.+...+...+++.+..|+++|++.+++.+....+|..++|.+.+.+.+..+|++.+++.+++.+
T Consensus 263 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~ 342 (352)
T cd06174 263 PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALAL 342 (352)
T ss_pred ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHH
Confidence 44678889999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred HHHHHHHh
Q 012159 281 AWFSGFKI 288 (470)
Q Consensus 281 ~~~~~~~~ 288 (470)
+..+..+.
T Consensus 343 i~~i~~~~ 350 (352)
T cd06174 343 LAALLLLL 350 (352)
T ss_pred HHHHHhee
Confidence 77665543
No 137
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.52 E-value=4.6e-13 Score=133.67 Aligned_cols=174 Identities=15% Similarity=0.068 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHHhhhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHH
Q 012159 116 IGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATA 194 (470)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 194 (470)
++.+++..++............|. +.+++|++..+.++..+...++..++.+++|+++||+|+|+.+.....+..++..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~ 339 (467)
T PRK09556 260 IWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFT 339 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHH
Confidence 444455555555555556666776 5567999999999999999999999999999999999999877665444333322
Q ss_pred HHH-HhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhh-HHHHHHhhHHhhhc--------
Q 012159 195 LLP-LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSF-GSVAGLLLAPPIIE-------- 264 (470)
Q Consensus 195 ~~~-~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~-------- 264 (470)
+.. ...++.+.+.+.+++.|++.............|.+|++.||++.|+.+...++ |..++|.+.|++.+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~ 419 (467)
T PRK09556 340 LGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPI 419 (467)
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccccc
Confidence 221 12334455667777788654443333446777999999999999999998886 77999999999999
Q ss_pred ----ccCchHHHHHHHHHHHHHHHHHHhh
Q 012159 265 ----NLGWESVFYIFGLLGIAWFSGFKIL 289 (470)
Q Consensus 265 ----~~g~~~~~~~~~~~~~~~~~~~~~~ 289 (470)
..||+..|++.++..++..+..+++
T Consensus 420 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 420 FGYTLTGWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred ccccccChHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999877777665555544
No 138
>PRK12382 putative transporter; Provisional
Probab=99.51 E-value=1.1e-12 Score=128.00 Aligned_cols=155 Identities=20% Similarity=0.194 Sum_probs=127.7
Q ss_pred hHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 012159 132 NLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRV 211 (470)
Q Consensus 132 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 211 (470)
....+.+.+.++.|.+. .++..+.+.++..+++++.|++.||+|+|+.+..+..+.+++.++.. ..++.+.+++..+
T Consensus 234 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 310 (392)
T PRK12382 234 VIGTFVSLYFASKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLW-LAPTAWVALAGAA 310 (392)
T ss_pred HHHHHHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHH-HcccHHHHHHHHH
Confidence 34445555555666543 56667778888899999999999999999999988888777776654 3455567778889
Q ss_pred HHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHHHHHhh
Q 012159 212 LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL 289 (470)
Q Consensus 212 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 289 (470)
+.|++.+...+...+.+.+.+|+++|++++|+++....+|..+||.++|++.++.||++.|++.+++.++..+..+..
T Consensus 311 l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 311 LTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 999999888888888999999999999999999999999999999999999999999999999988877766655544
No 139
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.50 E-value=1e-12 Score=128.12 Aligned_cols=168 Identities=14% Similarity=0.101 Sum_probs=120.4
Q ss_pred HHHHHHHHHHhhhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcH--HHHH------HHHH
Q 012159 118 TTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRK--VLQT------GVLI 188 (470)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~--~~~~------~~~~ 188 (470)
..++..++.......+....|. +.+++|.+..+.+++.+...++..++.++.|+++||++||+ .... +.++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (399)
T TIGR00893 219 GLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLV 298 (399)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Confidence 3444455555555556666666 45668999999999999999999999999999999999996 1111 1111
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccC-
Q 012159 189 WSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG- 267 (470)
Q Consensus 189 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g- 267 (470)
.++...... ..++.+..+...++.+++.+ ..+...+++.|.+|+++|++++|+.+....+|..++|.+.|.+.+..|
T Consensus 299 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~ 376 (399)
T TIGR00893 299 LSLLMFATN-YVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGS 376 (399)
T ss_pred HHHHHHHhc-cchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCc
Confidence 111111110 11232333333444444444 788999999999999999999999999999999999999999999988
Q ss_pred chHHHHHHHHHHHHHHHHHH
Q 012159 268 WESVFYIFGLLGIAWFSGFK 287 (470)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~ 287 (470)
|++.|++.+++.++..+..+
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 377 FAGALMVVAALALIGALSYL 396 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHH
Confidence 99999988887766655443
No 140
>PRK03699 putative transporter; Provisional
Probab=99.50 E-value=9.9e-13 Score=128.40 Aligned_cols=174 Identities=13% Similarity=0.172 Sum_probs=134.3
Q ss_pred HHHHHHHHHhhhhhHHHhHHhhh-hhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHH
Q 012159 119 TSLAFVICNMDKVNLSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP 197 (470)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 197 (470)
+.+..++.......+..+.|.+. +++|++..+.+++.+.+.++..++.++.|+++||+++|+++.....+.++...+..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~ 289 (394)
T PRK03699 210 LAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFV 289 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH
Confidence 33344444444445556677655 67899999999999999999999999999999999999998887766655554443
Q ss_pred HhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHH
Q 012159 198 LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGL 277 (470)
Q Consensus 198 ~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~ 277 (470)
..++.+.+.+..++.|++.+..++...+...+..+ +++++..+.......+|..++|.+.|++.+..|++..+++.++
T Consensus 290 -~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~ 367 (394)
T PRK03699 290 -NTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANG 367 (394)
T ss_pred -HcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHH
Confidence 34444556667788888888788887878787776 5577888998889999999999999999999999999999888
Q ss_pred HHHHHHHHHHhhccCCC
Q 012159 278 LGIAWFSGFKILQEGET 294 (470)
Q Consensus 278 ~~~~~~~~~~~~~~~~~ 294 (470)
+.++..+.+..+.+.++
T Consensus 368 ~~~~~~~~~~~~~~~~~ 384 (394)
T PRK03699 368 LYAVVFVMCILLGFVSK 384 (394)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 87776665555554433
No 141
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.50 E-value=1.5e-12 Score=126.53 Aligned_cols=153 Identities=15% Similarity=0.138 Sum_probs=125.2
Q ss_pred HHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 012159 133 LSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVL 212 (470)
Q Consensus 133 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 212 (470)
...++|.+.++.|.+..+.+++.+...++..+++++.|++.||+|+|+++..+.++.+++.+... .. ...+...++
T Consensus 219 ~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~---~~-~~~~~~~~l 294 (381)
T PRK03633 219 LYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML---SQ-AAMAPALFI 294 (381)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh---hh-HHHHHHHHH
Confidence 34456777777899999999999999999999999999999999999999888777766654432 22 233456677
Q ss_pred HHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHHHHHhh
Q 012159 213 VGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL 289 (470)
Q Consensus 213 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 289 (470)
.|++.....|...+.+.+..|+++++...+.++...++|.++||.++|++.+++||++.|++.+.+.++..+..+..
T Consensus 295 ~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 295 LGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred HHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHhc
Confidence 78877777899999999999888888888888889999999999999999999999999999888877665544443
No 142
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.50 E-value=5.4e-13 Score=131.32 Aligned_cols=158 Identities=20% Similarity=0.122 Sum_probs=129.7
Q ss_pred HHHhHHhhhhh-cCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 012159 133 LSVAIIPMSHR-FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRV 211 (470)
Q Consensus 133 ~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 211 (470)
+....|.+.++ +|.+..+.+++.+...++..++.++.+++.||.++++.+..+.++.+++.++.. ..++.+...++.+
T Consensus 242 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 320 (417)
T PRK10489 242 VRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFG-LMPMWILAVLCLA 320 (417)
T ss_pred HHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHH-ccchHHHHHHHHH
Confidence 44456666555 899999999999999999999999999999998888888888777777765553 4555566777888
Q ss_pred HHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHH-HHHhhc
Q 012159 212 LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFS-GFKILQ 290 (470)
Q Consensus 212 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~-~~~~~~ 290 (470)
+.|++.+...+...+++.+..|++.||+++|+++....+|..+||.+.|.+.+.+|++..+++.+++.++..+ ....++
T Consensus 321 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 400 (417)
T PRK10489 321 LFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLG 400 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcc
Confidence 8899888777888889999999999999999999999999999999999999999999888888776655443 434444
Q ss_pred c
Q 012159 291 E 291 (470)
Q Consensus 291 ~ 291 (470)
+
T Consensus 401 ~ 401 (417)
T PRK10489 401 E 401 (417)
T ss_pred c
Confidence 4
No 143
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.50 E-value=2.9e-12 Score=124.93 Aligned_cols=164 Identities=14% Similarity=0.037 Sum_probs=125.6
Q ss_pred HHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHH
Q 012159 125 ICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMP 204 (470)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (470)
+............|.+.+++|.+..+.+...+++.++..++.++.|++.||+|||+.+.++..+.+++..++.....+..
T Consensus 216 ~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 295 (393)
T PRK09705 216 LINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLP 295 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHH
Confidence 33444445556677766678999999999999999999999999999999999999998887776666554433333322
Q ss_pred HHHHHHHHHHhhccCchhhHHHHhhhccC-ccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccC-chHHHHHHHHHHHHH
Q 012159 205 GLVLSRVLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVFYIFGLLGIAW 282 (470)
Q Consensus 205 ~l~~~~~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-~~~~~~~~~~~~~~~ 282 (470)
.+ ..++.|++.+...+.......+..+ ++++++.+|+.+....++..++|.+.|++.++.| |...|++.++.+++.
T Consensus 296 ~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~ 373 (393)
T PRK09705 296 VL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGL 373 (393)
T ss_pred HH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHH
Confidence 22 2345688888888887777777774 5789999999999999999999999999999886 777788777766665
Q ss_pred HHHHHhhc
Q 012159 283 FSGFKILQ 290 (470)
Q Consensus 283 ~~~~~~~~ 290 (470)
.++.+.+.
T Consensus 374 ~~~~~~~~ 381 (393)
T PRK09705 374 MIITLRFA 381 (393)
T ss_pred HHHHHHhc
Confidence 55544443
No 144
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.49 E-value=1.2e-12 Score=129.53 Aligned_cols=173 Identities=14% Similarity=0.020 Sum_probs=117.2
Q ss_pred HHHHHHHHHhhhhhHHHhHHhhh-hhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhh--cCcHHH-HHHHHHHHHHHH
Q 012159 119 TSLAFVICNMDKVNLSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF--GGRKVL-QTGVLIWSLATA 194 (470)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--g~r~~~-~~~~~~~~~~~~ 194 (470)
+.+..++.......+...+|.+. +++|++..+.+...+++.++..++.++.|+++||+ ++|+.. ....+...+...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~ 327 (434)
T PRK11663 248 LSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVG 327 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHH
Confidence 33444444444455555666654 67899999999999999999999999999999998 333332 221111111111
Q ss_pred HHH-HhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHH
Q 012159 195 LLP-LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFY 273 (470)
Q Consensus 195 ~~~-~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~ 273 (470)
... ....+.....+..+..|++...........+.+.+|+++|++++|+.+....+|.+++|.+.|++.++.||+..|+
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~ 407 (434)
T PRK11663 328 SLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFV 407 (434)
T ss_pred HHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHH
Confidence 111 1112223333344444544332233345567889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcc
Q 012159 274 IFGLLGIAWFSGFKILQE 291 (470)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~ 291 (470)
+.++++++..+..+...+
T Consensus 408 ~~~~~~~~~~~~~~~~~~ 425 (434)
T PRK11663 408 VISIAAGISALLLLPFLN 425 (434)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 998888776665554443
No 145
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.49 E-value=6e-12 Score=126.02 Aligned_cols=157 Identities=12% Similarity=0.100 Sum_probs=120.6
Q ss_pred hHHhhhhhcCCCchhhHHHHH-HHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHH---HHhhhHHHHHHHHHH
Q 012159 136 AIIPMSHRFGWNSSVAGLVQS-SFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL---PLLAGFMPGLVLSRV 211 (470)
Q Consensus 136 ~~~~~~~~~g~s~~~~~~~~~-~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~ 211 (470)
..|.+.+++|++..+++++.. ...++..++.+++|+++||+|+|+.+.++.++.++..+++ +...++.+.+.+..+
T Consensus 245 ~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~ 324 (491)
T PRK11010 245 TTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVF 324 (491)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence 344556779999999999974 6668999999999999999999988777665544433222 122233344444556
Q ss_pred HHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHHHHHhhcc
Q 012159 212 LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQE 291 (470)
Q Consensus 212 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 291 (470)
+..++.+...+...++..+..+++.+++.+++.+...++|..+++.++|++.+.+||+..|.+.++++++..+....+++
T Consensus 325 l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 325 FENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 65555555567778888899998999999999999999999999999999999999999999988888877776666654
Q ss_pred C
Q 012159 292 G 292 (470)
Q Consensus 292 ~ 292 (470)
+
T Consensus 405 ~ 405 (491)
T PRK11010 405 T 405 (491)
T ss_pred c
Confidence 3
No 146
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.48 E-value=1.3e-12 Score=131.62 Aligned_cols=148 Identities=16% Similarity=0.154 Sum_probs=115.6
Q ss_pred HHHhHHhhh-hhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHH
Q 012159 133 LSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL-AGFMPGLVLSR 210 (470)
Q Consensus 133 ~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~ 210 (470)
....+|.+. +++|.+..+.+++.+...++..++.++.|+++||+|+|+++.++.++.++..++.... ..+.+.+.+..
T Consensus 294 ~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLL 373 (496)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence 445667765 5899999999999999999999999999999999999999888776655554433222 23333444444
Q ss_pred HHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHH
Q 012159 211 VLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGI 280 (470)
Q Consensus 211 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~ 280 (470)
++.++......+...+++.+.+|+++|++++|+.+....+|..+||+++|.+.+++||+..+...++...
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~ 443 (496)
T PRK03893 374 FFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLT 443 (496)
T ss_pred HHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHH
Confidence 5444443444567778899999999999999999999999999999999999999999988876655443
No 147
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.48 E-value=3.7e-13 Score=131.17 Aligned_cols=163 Identities=15% Similarity=0.132 Sum_probs=123.7
Q ss_pred HHHHHHHHHHhhhhhHHHhHHhhh-hhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHH-HH
Q 012159 118 TTSLAFVICNMDKVNLSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT-AL 195 (470)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~-~~ 195 (470)
...+..++............|.+. +++|.+..+.+.+.+...++..++.++.|+++||+|||+.+.....+..+.. .+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 302 (394)
T TIGR00883 223 LGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPL 302 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHH
Confidence 333444444444555556666654 7789999999999999999999999999999999999998776554443332 12
Q ss_pred HHHh--hhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHH-HHhhhhhHHHHHHhhHHhhhcccC-chHH
Q 012159 196 LPLL--AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSF-VFGGLSFGSVAGLLLAPPIIENLG-WESV 271 (470)
Q Consensus 196 ~~~~--~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~g-~~~~ 271 (470)
.... .++.+.+++..++.|++.+...+...+++.|.+|+++|++++++ ++....+|..++|.++|.+.++.| |++.
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~ 382 (394)
T TIGR00883 303 LMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAI 382 (394)
T ss_pred HHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhH
Confidence 1112 23446666777888988888889999999999999999999998 456667899999999999999988 8887
Q ss_pred HHHHHHHHH
Q 012159 272 FYIFGLLGI 280 (470)
Q Consensus 272 ~~~~~~~~~ 280 (470)
++...+..+
T Consensus 383 ~~~~~~~~l 391 (394)
T TIGR00883 383 GYYLAALAL 391 (394)
T ss_pred HHHHHHHHH
Confidence 777665444
No 148
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.47 E-value=4.3e-13 Score=133.17 Aligned_cols=164 Identities=18% Similarity=0.161 Sum_probs=127.2
Q ss_pred HHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhh--cCcHHHHHH--HHHHHHHHHH
Q 012159 120 SLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF--GGRKVLQTG--VLIWSLATAL 195 (470)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--g~r~~~~~~--~~~~~~~~~~ 195 (470)
.+..++..........++|.+.+++|.+..+.+++.++..++..+++++.|++.||. ++|+...++ .++.+++.++
T Consensus 247 ~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll 326 (455)
T TIGR00892 247 LSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLL 326 (455)
T ss_pred HHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444455566776778899999999999999999999999999999974 334333332 2333333333
Q ss_pred HHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhccc-CchHHHHH
Q 012159 196 LPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-GWESVFYI 274 (470)
Q Consensus 196 ~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-g~~~~~~~ 274 (470)
+ ...++++.+++.+++.|++.+...+...+++.+.+|++++++.+|+++....+|.++||.++|.+.+.. +|++.|++
T Consensus 327 ~-~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~ 405 (455)
T TIGR00892 327 C-ALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYA 405 (455)
T ss_pred H-HHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHH
Confidence 3 244566778888999999999999999999999999999999999999999999999999999999887 49999999
Q ss_pred HHHHHHHHHH
Q 012159 275 FGLLGIAWFS 284 (470)
Q Consensus 275 ~~~~~~~~~~ 284 (470)
.+++.++..+
T Consensus 406 ~~~~~li~~~ 415 (455)
T TIGR00892 406 SGSIVVSAGL 415 (455)
T ss_pred hhHHHHHHHH
Confidence 8877655443
No 149
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.47 E-value=1.9e-12 Score=129.58 Aligned_cols=177 Identities=16% Similarity=0.103 Sum_probs=133.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHH
Q 012159 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (470)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (470)
++.+...++..+.............|.+.+++|.+..+.++......++..++.+++|+++||+|||+.+.++.++.+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 362 (481)
T TIGR00879 283 RRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAIC 362 (481)
T ss_pred HHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 44444555555555555555666778888889999988999999999999999999999999999999999887777776
Q ss_pred HHHHHHhh----h------HHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhh
Q 012159 193 TALLPLLA----G------FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI 262 (470)
Q Consensus 193 ~~~~~~~~----~------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 262 (470)
.+++.... + ....+....++.+.......+....++.|.+|+++|++++++.+....+|.+++|.+.+.+
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~ 442 (481)
T TIGR00879 363 LFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTM 442 (481)
T ss_pred HHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65554211 1 2222233333333333334466677889999999999999999999999999999999999
Q ss_pred hcccCchHHHHHHHHHHHHHHHHHHhh
Q 012159 263 IENLGWESVFYIFGLLGIAWFSGFKIL 289 (470)
Q Consensus 263 ~~~~g~~~~~~~~~~~~~~~~~~~~~~ 289 (470)
.++.+|++.|++.++++++..++.+++
T Consensus 443 ~~~~~~~~~f~~~~~~~~~~~i~~~~~ 469 (481)
T TIGR00879 443 LESIGVGGVFIFFGGLNVLGLIFVYFF 469 (481)
T ss_pred HHhcCccceehhHHHHHHHHHHHHhee
Confidence 999999999999888877766655444
No 150
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.47 E-value=9.7e-13 Score=130.80 Aligned_cols=175 Identities=13% Similarity=0.026 Sum_probs=117.5
Q ss_pred HHHHHHHHHHhhhhhHHHhHHhhh-hhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhh--cCcHHHH-HHHHHHHHHH
Q 012159 118 TTSLAFVICNMDKVNLSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF--GGRKVLQ-TGVLIWSLAT 193 (470)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--g~r~~~~-~~~~~~~~~~ 193 (470)
...+..++..........++|.+. ++.|++..+.+++..++.++..++.+++|+++||+ +||+... ....+..++.
T Consensus 257 ~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~ 336 (452)
T PRK11273 257 YIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIAT 336 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHH
Confidence 334444444444445566777755 45789999999999999999999999999999999 5554332 2222223332
Q ss_pred HHHHHh-hhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHH-HHhhHHhhhcccCchHH
Q 012159 194 ALLPLL-AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVA-GLLLAPPIIENLGWESV 271 (470)
Q Consensus 194 ~~~~~~-~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~~~~~l~~~~g~~~~ 271 (470)
+++... ..+.+..++..++.|.+..........+..|.+|+++||+++|+.+....+|+.+ +|.++|++.++.||+..
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~ 416 (452)
T PRK11273 337 IVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGG 416 (452)
T ss_pred HHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHH
Confidence 222111 2233334444555555433333334456779999999999999999888887654 79999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccC
Q 012159 272 FYIFGLLGIAWFSGFKILQEG 292 (470)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~ 292 (470)
|++.++++++.++....+...
T Consensus 417 f~~~~~~~~~~~~~~~~~~~~ 437 (452)
T PRK11273 417 FMVMIGGSILAVILLIVVMIG 437 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhcc
Confidence 999888777665555544443
No 151
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.45 E-value=4.7e-12 Score=123.94 Aligned_cols=167 Identities=14% Similarity=0.121 Sum_probs=126.1
Q ss_pred HHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHH-HHHHHHHHHHHHHHHh
Q 012159 121 LAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQ-TGVLIWSLATALLPLL 199 (470)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~-~~~~~~~~~~~~~~~~ 199 (470)
+..++............|.+.+++|.+..+.+++.+...++..++.++.|+++||+|||+.+. .+.+..+++.+.+...
T Consensus 229 ~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~ 308 (402)
T TIGR00897 229 MVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYI 308 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 344444455555666778877889999999999999999999999999999999999988764 3333333332222211
Q ss_pred ----hhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHH
Q 012159 200 ----AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIF 275 (470)
Q Consensus 200 ----~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~ 275 (470)
.++.+..++..++.|++.+...+ ....+.+..| ++|++++|+.+....+|..++|.+++.+.+..||...+++.
T Consensus 309 ~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~ 386 (402)
T TIGR00897 309 PQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIF 386 (402)
T ss_pred HHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHH
Confidence 23445666778888888776544 4556667655 68999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhh
Q 012159 276 GLLGIAWFSGFKIL 289 (470)
Q Consensus 276 ~~~~~~~~~~~~~~ 289 (470)
+++.++..+...++
T Consensus 387 a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 387 AALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHHHHHh
Confidence 98877766655544
No 152
>PRK09952 shikimate transporter; Provisional
Probab=99.45 E-value=3.9e-12 Score=125.80 Aligned_cols=163 Identities=14% Similarity=0.116 Sum_probs=117.8
Q ss_pred hhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHh---hhHHH
Q 012159 129 DKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL---AGFMP 204 (470)
Q Consensus 129 ~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~---~~~~~ 204 (470)
.........|. +.+++|.+......+..+..+...++.+++|+++||+|||+++..+.++..++.+.+... .+..+
T Consensus 265 ~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (438)
T PRK09952 265 TMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFW 344 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHH
Confidence 33334444454 556788888776666666777778889999999999999999888766554443322111 12334
Q ss_pred HHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHh-hhhhHHHHHHhhHHhhhccc--CchHHHHHHHHHHHH
Q 012159 205 GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFG-GLSFGSVAGLLLAPPIIENL--GWESVFYIFGLLGIA 281 (470)
Q Consensus 205 ~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~--g~~~~~~~~~~~~~~ 281 (470)
.+++..++.+++.+...+...+++.|.+|.+.|+.+.++.+. +..+|+.++|.+.+++.+.. +|+..+.+.+++.++
T Consensus 345 ~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i 424 (438)
T PRK09952 345 IVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLI 424 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Confidence 444556666788777788889999999999999999998544 45589999999999998754 488888887777777
Q ss_pred HHHHHHhhcc
Q 012159 282 WFSGFKILQE 291 (470)
Q Consensus 282 ~~~~~~~~~~ 291 (470)
..+..+.+++
T Consensus 425 ~~v~~~~~~~ 434 (438)
T PRK09952 425 SAMTALLMKD 434 (438)
T ss_pred HHHHHHHccc
Confidence 7666665544
No 153
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.45 E-value=1e-12 Score=128.80 Aligned_cols=142 Identities=11% Similarity=0.116 Sum_probs=114.8
Q ss_pred HHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 012159 133 LSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRV 211 (470)
Q Consensus 133 ~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 211 (470)
.....|. +.+++|.+..+.+++.+...++..++.++.|++.||+|||+.+.++.++.++.........++.+.+.+..+
T Consensus 257 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (405)
T TIGR00891 257 IQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLF 336 (405)
T ss_pred hhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHH
Confidence 3334454 556789999999999999999999999999999999999999888776653333322223344455666667
Q ss_pred HHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccC-chHHHHH
Q 012159 212 LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVFYI 274 (470)
Q Consensus 212 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-~~~~~~~ 274 (470)
+.|++.+...+....++.|.+|+++|++++|+.+....+|..++|+++|++.++.| |+..+..
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 337 FQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 77777777778888999999999999999999999999999999999999999988 8766655
No 154
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.41 E-value=3.4e-11 Score=117.40 Aligned_cols=309 Identities=18% Similarity=0.154 Sum_probs=201.2
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCch-hhHHHHHHH----HHHHHHhhhhhHHHhhhhcCcHHHHHHH
Q 012159 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSS-VAGLVQSSF----FWGYALSQLPGGWLAKIFGGRKVLQTGV 186 (470)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~-~~~~~~~~~----~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 186 (470)
.+......++-.+...+.........+.....++.+.. ..+...... .+...+.++..|.++||+|||..+....
T Consensus 20 ~~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~ 99 (463)
T KOG2816|consen 20 MRHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPL 99 (463)
T ss_pred hhHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHH
Confidence 34556666666666666666666666665555543322 223333333 6788899999999999999999999988
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhh--ccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhc
Q 012159 187 LIWSLATALLPLLAGFMPGLVLSRVLVGIG--EGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE 264 (470)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~--~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 264 (470)
....+..+... +.. +|.++ +.|+. .+.......++++|....++|...+|+.+.....+..++|.+++.+..
T Consensus 100 ~~~~l~~~~~~-~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~ 173 (463)
T KOG2816|consen 100 FGTILPALCLL-FQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVK 173 (463)
T ss_pred HHHHHhHHHHH-HHH-HHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 88777665553 333 33333 44443 235567888999999999999999999999999999999999999999
Q ss_pred ccCchHHHHHHHHHHHHHHHHH-HhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHH
Q 012159 265 NLGWESVFYIFGLLGIAWFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIY 343 (470)
Q Consensus 265 ~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 343 (470)
..|...+|.+..+..++..+.. .+++|+..+++.......+ ....+ ....+..+. .......-.+|..+.+++
T Consensus 174 ~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~-~~~~~---~~~~~~~~~--~~~~~~~~~~r~~l~l~l 247 (463)
T KOG2816|consen 174 FLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRE-LTPGS---LDSSHVADA--FQSLTKVGPDRLLLLLLL 247 (463)
T ss_pred hcCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccc-cCCCc---ccchhhhhh--hhhhcccCCCccchHHHH
Confidence 9999999999888877665544 4455543333222100000 00000 000000000 000111223455555555
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCcch--------------
Q 012159 344 AHFCGSWGHYTCLS-WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAA-QFADNLIATGVETT-------------- 407 (470)
Q Consensus 344 ~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g-~l~dr~~~~~~~~~-------------- 407 (470)
..++.......-.. .++.|+...+|++..+.+.+.+..+....++.++.. .+...++.++....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af 327 (463)
T KOG2816|consen 248 VAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAF 327 (463)
T ss_pred HHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHH
Confidence 55555444433222 446777778899999999888888888888887776 66666777663332
Q ss_pred ----------------------------------------HHHHHHhhhhHHHHHHHHHHHhhcc
Q 012159 408 ----------------------------------------MGITNTVGAVPGIVGVALTGYLLDS 432 (470)
Q Consensus 408 ----------------------------------------~g~~~~~~~~~~~ig~~~~g~l~~~ 432 (470)
.+++..+..+..+++|.+.+.+...
T Consensus 328 ~~~~w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~ 392 (463)
T KOG2816|consen 328 ATETWMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFAL 392 (463)
T ss_pred hccchhhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHH
Confidence 7778888888888888888877543
No 155
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.41 E-value=1.5e-11 Score=121.13 Aligned_cols=179 Identities=17% Similarity=0.121 Sum_probs=144.6
Q ss_pred HHHHHHHHHHHHHH-hhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCc--HHHHHHHHHHH
Q 012159 114 KLIGTTSLAFVICN-MDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGR--KVLQTGVLIWS 190 (470)
Q Consensus 114 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r--~~~~~~~~~~~ 190 (470)
+.+....+++++.. ...+++........+++|++..+...+..+..+..+++.+++|++.||+|.| +++.++.+++.
T Consensus 281 ~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~ 360 (477)
T PF11700_consen 281 RQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWI 360 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHH
Confidence 34444445544433 3344444445556679999999999999999999999999999999999999 88888877765
Q ss_pred HHHHHHHH-------hhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhh
Q 012159 191 LATALLPL-------LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII 263 (470)
Q Consensus 191 ~~~~~~~~-------~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 263 (470)
+..+...+ -..+.+.+++..++.|++.|..++...++.+++.|+++.+..+|++.........+||++.|.+.
T Consensus 361 ~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~ 440 (477)
T PF11700_consen 361 IIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLIT 440 (477)
T ss_pred HHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54433322 03445789999999999999999999999999999999999999999999999999999999999
Q ss_pred cccC-chHHHHHHHHHHHHHHHHHHhhccC
Q 012159 264 ENLG-WESVFYIFGLLGIAWFSGFKILQEG 292 (470)
Q Consensus 264 ~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (470)
+..| .|+.++...++.++.+++.+.++.+
T Consensus 441 ~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~ 470 (477)
T PF11700_consen 441 DATGSQRYGFLFLLVLFLIGLILLFFVDVE 470 (477)
T ss_pred HHhCCchhHHHHHHHHHHHHHHHHhhccch
Confidence 9887 8899888888887777777666543
No 156
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.39 E-value=2.8e-11 Score=118.67 Aligned_cols=263 Identities=19% Similarity=0.171 Sum_probs=169.8
Q ss_pred HHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhc-----CcHHHHHHHHHHHHHHHHHHHhhh---HHHH
Q 012159 134 SVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFG-----GRKVLQTGVLIWSLATALLPLLAG---FMPG 205 (470)
Q Consensus 134 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g-----~r~~~~~~~~~~~~~~~~~~~~~~---~~~~ 205 (470)
....+.+.+++|+++.+...+.++..+... ..++.|.++|-+. ||..++++.++.+++.+.++..+. +...
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~ 88 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAI 88 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhh
Confidence 344677889999999999999888888875 5688999999763 555666666665454444443332 4456
Q ss_pred HHHHHHHHHhhccCchhhHHHHhhhcc--CccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHH
Q 012159 206 LVLSRVLVGIGEGVSPSAATDLIARSI--PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF 283 (470)
Q Consensus 206 l~~~~~l~G~~~~~~~~~~~~~i~~~~--~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 283 (470)
..+..++..+|.........+++.|.. .++.+|...+.......+|.+++..++|.+.+..++++.|.+.+++.++..
T Consensus 89 ~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~ 168 (433)
T PF03092_consen 89 AVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLML 168 (433)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHH
Confidence 667778888898999999999999987 334478888899999999999999999999999999999999988877766
Q ss_pred HHHHhhccCCCCCCCCCC---CccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHH-HHHHHHHHHHHHHHHH
Q 012159 284 SGFKILQEGETSNGATLA---PRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIY-AHFCGSWGHYTCLSWL 359 (470)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~ 359 (470)
+..+++.++++..+.... .++.........++. .....+.++.|.+|...+ ..++............
T Consensus 169 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~ 239 (433)
T PF03092_consen 169 IVALFLLEERKVRPADEVFSFGKEEVPCLFGSFREQ---------LSELWRALQQRAIWQPILFFIFFFNLPPSISSASS 239 (433)
T ss_pred HHHHHhhhhccccccchhhcccccccchhhHHHHHH---------HHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccE
Confidence 655555554222211110 000000000000000 112356777788877666 3333222211111100
Q ss_pred HHHHHHHhC---CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 012159 360 PTYFSEELS---LNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVET 406 (470)
Q Consensus 360 ~~~~~~~~g---~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~ 406 (470)
-.+..+..+ +++...+.+..+..++.++|..+......+...|+...
T Consensus 240 fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~ 289 (433)
T PF03092_consen 240 FYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFV 289 (433)
T ss_pred EEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 011223345 88888888887777888888877776666655554433
No 157
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.39 E-value=1.8e-11 Score=119.07 Aligned_cols=151 Identities=17% Similarity=0.106 Sum_probs=122.4
Q ss_pred hhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 012159 130 KVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLS 209 (470)
Q Consensus 130 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 209 (470)
...+....|.+.++.|.+..+.|.+.++..++..+..++.|++.||+|+|+.+..+.++.++..++.+ ..++.+.+++.
T Consensus 221 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~ 299 (382)
T PRK11128 221 HAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMG-STTALPWLIVI 299 (382)
T ss_pred hHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHH
Confidence 33344455565577999999999999999999999999999999999999999999888887766654 45666788889
Q ss_pred HHHHHhhccCchhhHHHHhhhccCccchhhHHHHHH-hhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHH
Q 012159 210 RVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVF-GGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF 283 (470)
Q Consensus 210 ~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 283 (470)
.++.|++.+...+....++.+. +++++++..++++ ....+|..+||.++|.+.+++|+ ..++..+++.++.+
T Consensus 300 ~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 300 QILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 9999999998888888888886 5567789999876 55678889999999999999987 46666666655443
No 158
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.39 E-value=5.1e-12 Score=127.35 Aligned_cols=171 Identities=12% Similarity=0.058 Sum_probs=112.6
Q ss_pred HHHHHhhhhhHHHhHHhhhhhcCCCchhhHH------------HHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHH
Q 012159 123 FVICNMDKVNLSVAIIPMSHRFGWNSSVAGL------------VQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS 190 (470)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 190 (470)
.+...+..+......|.+.++.|.+....+. ...+..++..++.+++++++||+|||++++++.++.+
T Consensus 297 ~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~ 376 (502)
T TIGR00887 297 WFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILT 376 (502)
T ss_pred HHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHH
Confidence 3333333334444577777788876543211 2334445666788899999999999999988887777
Q ss_pred HHHHHHHHhhh---HHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcc--
Q 012159 191 LATALLPLLAG---FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-- 265 (470)
Q Consensus 191 ~~~~~~~~~~~---~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-- 265 (470)
++.+++..... ....+....+...++.....+....+.+|.+|.+.|++++|+.+....+|.+++|.+.+++.+.
T Consensus 377 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~ 456 (502)
T TIGR00887 377 VLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGD 456 (502)
T ss_pred HHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcccc
Confidence 66655543221 1111111112222222334456677889999999999999999999999999999999998873
Q ss_pred --------cCchHHHHHHHHHHHHHHHHHHhhccCC
Q 012159 266 --------LGWESVFYIFGLLGIAWFSGFKILQEGE 293 (470)
Q Consensus 266 --------~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (470)
.++...|++.+++.++..+..+++||++
T Consensus 457 ~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpEt~ 492 (502)
T TIGR00887 457 PTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPETK 492 (502)
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHheEeccCC
Confidence 3456678888777766655555555543
No 159
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.38 E-value=7.5e-12 Score=116.40 Aligned_cols=179 Identities=22% Similarity=0.196 Sum_probs=143.1
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHH
Q 012159 114 KLIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (470)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (470)
+..+.+++.++..+.....++..+|. +.++||.+..+.|.....+.+...+..+.+|+++||+|.+|++.+....++++
T Consensus 218 ~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~ 297 (417)
T COG2223 218 KDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALA 297 (417)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHH
Confidence 33455666777777777778888877 67889999999999999999999999999999999999999999998888888
Q ss_pred HHHHHHhh------hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhccc
Q 012159 193 TALLPLLA------GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL 266 (470)
Q Consensus 193 ~~~~~~~~------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 266 (470)
..+..... .+....+...+..+++.|........++..+++ ++-|.+.|+....+++|+..-|...+...+..
T Consensus 298 ~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~t 376 (417)
T COG2223 298 AALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLT 376 (417)
T ss_pred HHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhc
Confidence 87775544 333444444444455555555566788888887 68999999999999999999999999999988
Q ss_pred C-chHHHHHHHHHHHHHHHHHHhhccCC
Q 012159 267 G-WESVFYIFGLLGIAWFSGFKILQEGE 293 (470)
Q Consensus 267 g-~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (470)
| +...|++...+.+++.+..+....++
T Consensus 377 g~~~~~f~~~~~~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 377 GSYTGAFMLLLAFYLVALVLTWALYARR 404 (417)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8 99999999988888777666655443
No 160
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.38 E-value=3.9e-12 Score=122.62 Aligned_cols=133 Identities=23% Similarity=0.328 Sum_probs=115.4
Q ss_pred HhHHhhhhh-cCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 012159 135 VAIIPMSHR-FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLV 213 (470)
Q Consensus 135 ~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 213 (470)
...|.+.++ +|.+..+.+++.+...++..++.++.+++.||++||+.+..+.++.+++..+.....++.+.+++..++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAI 311 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHH
Confidence 556776554 8999999999999999999999999999999999999998887777766665543332367788889999
Q ss_pred HhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccC
Q 012159 214 GIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG 267 (470)
Q Consensus 214 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 267 (470)
|++.+...+...+++.|..|+++|++++|+.+....+|..++|.++|.+.+++|
T Consensus 312 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 312 GVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999988654
No 161
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.37 E-value=1.7e-11 Score=122.14 Aligned_cols=157 Identities=20% Similarity=0.135 Sum_probs=135.0
Q ss_pred hhHHHhHHhhh-hhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 012159 131 VNLSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLS 209 (470)
Q Consensus 131 ~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 209 (470)
..+...+|.+. +.+|.++..+|++.+++++|.+++.++.+++.+|+++++.+..+.++++++.+.++ ..++.+..++.
T Consensus 235 ~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~la-l~~~~~~~~~~ 313 (524)
T PF05977_consen 235 SAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLA-LSPSFWLALIA 313 (524)
T ss_pred hHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHh-cchHHHHHHHH
Confidence 33444577754 56899999999999999999999999999999999999999999888888877775 45566788888
Q ss_pred HHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHHHHHh
Q 012159 210 RVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKI 288 (470)
Q Consensus 210 ~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 288 (470)
.++.|++.........+.+....|++.|||++++++.....+..+|.++.|.+.+++|.+.++.+.++..++..++...
T Consensus 314 l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~ 392 (524)
T PF05977_consen 314 LFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALR 392 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999889999999999999999999999999999999999999999999999999998877765555444433
No 162
>PRK10504 putative transporter; Provisional
Probab=99.36 E-value=2.3e-11 Score=121.74 Aligned_cols=149 Identities=19% Similarity=0.157 Sum_probs=118.2
Q ss_pred HHHHHHHHhhhhhHHHhHHhhhh-hcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHH
Q 012159 120 SLAFVICNMDKVNLSVAIIPMSH-RFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL 198 (470)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 198 (470)
....++............|.+.+ .+|.++.+.++......++..++.++.|++.||+|+|+++..+.++.++...++..
T Consensus 267 l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~ 346 (471)
T PRK10504 267 LAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFML 346 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHh
Confidence 33344444444555556776555 58999999999999999999999999999999999999999888877777655543
Q ss_pred hh--hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCc
Q 012159 199 LA--GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 268 (470)
Q Consensus 199 ~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~ 268 (470)
.. ++.+.+.+..++.|++.+...+....++.+..|+++++.++++.+....+|..+|+.++|.+.+..|+
T Consensus 347 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 347 VALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 32 23333445667788888888888899999999999999999999999999999999999999877665
No 163
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.36 E-value=4.4e-11 Score=118.18 Aligned_cols=144 Identities=15% Similarity=0.137 Sum_probs=107.5
Q ss_pred HHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 012159 133 LSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVL 212 (470)
Q Consensus 133 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 212 (470)
+...+|.+.++.|.+..+.+.+.++..++..++.++.|++.||+|||+.+..+.++.++..++......... ..+..++
T Consensus 250 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 328 (426)
T PRK12307 250 IFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNY-LLLGACL 328 (426)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccH-HHHHHHH
Confidence 445667776778999999999999999999999999999999999999988887766555444322222211 2222233
Q ss_pred HHh--hccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHH
Q 012159 213 VGI--GEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGL 277 (470)
Q Consensus 213 ~G~--~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~ 277 (470)
.|+ +..+..+....++.|.+|+++|++++|+......+|+.++|.+.|++.++.|+....++...
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~~~~ 395 (426)
T PRK12307 329 FGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFIVA 395 (426)
T ss_pred HHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 333 33333456677889999999999999999999999999999999999999887654444333
No 164
>PRK15075 citrate-proton symporter; Provisional
Probab=99.35 E-value=2.1e-11 Score=120.63 Aligned_cols=149 Identities=15% Similarity=0.081 Sum_probs=105.3
Q ss_pred HHHHHHHhhhhhHHHhHHhhhh-hcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHH-HHH
Q 012159 121 LAFVICNMDKVNLSVAIIPMSH-RFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATAL-LPL 198 (470)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~-~~~ 198 (470)
+..+...........+.|.+.+ .+|++..+.++...++.++..++.+++|+++||+|||+++..+.++..+.... ...
T Consensus 245 ~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 324 (434)
T PRK15075 245 LMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSW 324 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 3333344444555666777554 47999999999999999999999999999999999999888765443322211 111
Q ss_pred --hhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHh-hhhhHHHHHHhhHHhhhcccCch
Q 012159 199 --LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFG-GLSFGSVAGLLLAPPIIENLGWE 269 (470)
Q Consensus 199 --~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~g~~ 269 (470)
..++...+.+..++.|++.+...+....++.|.+|++.|++++++.+. +..+++.++|.+.+++.++.|++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 325 LVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 112223333444555666666666677889999999999999999654 44456788999999999988864
No 165
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.34 E-value=1.7e-11 Score=118.78 Aligned_cols=155 Identities=15% Similarity=0.135 Sum_probs=109.6
Q ss_pred HHHHHHHHHHhhhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcC-cHHHH-HHHHHHHHHHH
Q 012159 118 TTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGG-RKVLQ-TGVLIWSLATA 194 (470)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~-r~~~~-~~~~~~~~~~~ 194 (470)
.+.+..++............|. +.+.+|.+..+.+++.+...++..++.++.|++.||..+ |+... ..........+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~ 299 (379)
T TIGR00881 220 YISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSL 299 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHH
Confidence 3444444444444455555665 456789999999999999999999999999999998643 33222 21111111111
Q ss_pred HHHHh--hhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHH
Q 012159 195 LLPLL--AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF 272 (470)
Q Consensus 195 ~~~~~--~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~ 272 (470)
..... ..+....++..++.|+......+....+..+.+|+++|+++.|+.+....+|..++|.+.|.+.+++||++.|
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 300 LVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 11111 2233455566677777666666667788899999999999999999999999999999999999999998754
No 166
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.33 E-value=2.6e-11 Score=118.69 Aligned_cols=151 Identities=14% Similarity=0.166 Sum_probs=107.2
Q ss_pred HHhhhhhcCCCchhhHHHHHHHH-HHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHH---HHhhhHHHHHHHHH--
Q 012159 137 IIPMSHRFGWNSSVAGLVQSSFF-WGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL---PLLAGFMPGLVLSR-- 210 (470)
Q Consensus 137 ~~~~~~~~g~s~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~-- 210 (470)
.+.+.+++|+++.+++++.+... ++..++.+++|++.||+|+|+.+.++.++..+..+.+ +...++.+.+++..
T Consensus 233 ~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 312 (402)
T PRK11902 233 TTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGI 312 (402)
T ss_pred HHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 34566778999999999986654 5688999999999999999998877766655443322 22223444444444
Q ss_pred --HHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHHHHHh
Q 012159 211 --VLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKI 288 (470)
Q Consensus 211 --~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 288 (470)
+..|++.+...+....++.+.+|.++ .++.+...++|..+++.++|.+.+++||+..|.+.++++++..++.+.
T Consensus 313 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 313 ENLCGGMGTAAFVALLMALCNRSFSATQ----YALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 34555566666677777777766544 455555667787777778999999999999999998888777666554
Q ss_pred hcc
Q 012159 289 LQE 291 (470)
Q Consensus 289 ~~~ 291 (470)
.+.
T Consensus 389 ~~~ 391 (402)
T PRK11902 389 MRG 391 (402)
T ss_pred Hhh
Confidence 443
No 167
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.33 E-value=6.5e-11 Score=117.04 Aligned_cols=163 Identities=15% Similarity=0.086 Sum_probs=104.8
Q ss_pred HhhhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHH-h--hhH
Q 012159 127 NMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL-L--AGF 202 (470)
Q Consensus 127 ~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-~--~~~ 202 (470)
......+..++|. +.+++|.+..+.+...++..++..++.++.|+++||+|||+++.++.++.++....... . .++
T Consensus 256 ~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (432)
T PRK10406 256 SLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSS 335 (432)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 3334445556666 45668999999999999888888899999999999999999887765544333321211 1 112
Q ss_pred HHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhh-HHHHHHhhHHhhhcccC-chHHHHHHHHHHH
Q 012159 203 MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSF-GSVAGLLLAPPIIENLG-WESVFYIFGLLGI 280 (470)
Q Consensus 203 ~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~g-~~~~~~~~~~~~~ 280 (470)
....+....+.+++.+...+....+++|++|++.|++++|+.+...++ ++...|.+.+.+ +..| |...++..++..+
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~ 414 (432)
T PRK10406 336 PYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAV 414 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHH
Confidence 222222222222333333455678889999999999999998766553 344578877865 4445 5556666666666
Q ss_pred HHHHHHHhhc
Q 012159 281 AWFSGFKILQ 290 (470)
Q Consensus 281 ~~~~~~~~~~ 290 (470)
+..+..+++.
T Consensus 415 i~~~~~~~l~ 424 (432)
T PRK10406 415 VAFLVSLMLH 424 (432)
T ss_pred HHHHHHHHhh
Confidence 6555555543
No 168
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.33 E-value=5.9e-11 Score=115.36 Aligned_cols=151 Identities=17% Similarity=0.117 Sum_probs=110.2
Q ss_pred HHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhh
Q 012159 137 IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIG 216 (470)
Q Consensus 137 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~ 216 (470)
.|.+.+.+|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+.+++.++.....++.+..++..++.+++
T Consensus 223 ~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g 302 (382)
T PRK10091 223 KPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAG 302 (382)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 45566678999999999999999999999999999999999999998888877777655543444445555566666666
Q ss_pred ccCchhhHHHH-hhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcc-cCchHHHHHHHHHHHHHHHHHHhh
Q 012159 217 EGVSPSAATDL-IARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-LGWESVFYIFGLLGIAWFSGFKIL 289 (470)
Q Consensus 217 ~~~~~~~~~~~-i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~ 289 (470)
.....+..... ..+..+++.++.+ ..+....+|..+||.++|++.+. .+|++.+++.+++.++........
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (382)
T PRK10091 303 LFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLY 375 (382)
T ss_pred HHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHH
Confidence 54444444433 3344444445544 34667889999999999999985 689999999887766554444333
No 169
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.33 E-value=9.4e-11 Score=117.69 Aligned_cols=162 Identities=11% Similarity=-0.004 Sum_probs=119.9
Q ss_pred hhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhh--hHH-H
Q 012159 128 MDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA--GFM-P 204 (470)
Q Consensus 128 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~-~ 204 (470)
..........|.+.++.|.+.....+......+...++.++.|+++||+|||++++.+.++.+++.+++.... +.. .
T Consensus 285 ~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~ 364 (479)
T PRK10077 285 VGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGI 364 (479)
T ss_pred hChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccH
Confidence 3334445567888888999888778888888889999999999999999999999999988888776654321 111 1
Q ss_pred HHHHHHHHHHhhccC-chhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHh------hhcccCchHHHHHHHH
Q 012159 205 GLVLSRVLVGIGEGV-SPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPP------IIENLGWESVFYIFGL 277 (470)
Q Consensus 205 ~l~~~~~l~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~------l~~~~g~~~~~~~~~~ 277 (470)
......++.+++.+. ..+....++.|.+|+++|++++|+.+....+|.++++.+.+. +.+..+|++.|++.++
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 444 (479)
T PRK10077 365 VALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGC 444 (479)
T ss_pred HHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHH
Confidence 222333444444443 346778999999999999999999999999998888665554 4467889999999888
Q ss_pred HHHHHHHHHHhh
Q 012159 278 LGIAWFSGFKIL 289 (470)
Q Consensus 278 ~~~~~~~~~~~~ 289 (470)
++++..++.+.+
T Consensus 445 ~~~~~~~~~~~~ 456 (479)
T PRK10077 445 MGVLAALFMWKF 456 (479)
T ss_pred HHHHHHHHHHhc
Confidence 776665555444
No 170
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.33 E-value=9.6e-11 Score=109.93 Aligned_cols=161 Identities=11% Similarity=0.066 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHhHHhhhh---hcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHH
Q 012159 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSH---RFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS 190 (470)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 190 (470)
+.+....++.++.......+..+.+.+.+ .+|+++.+.++..+.+..+..++.+..+++.||+|+|+++.++..+..
T Consensus 140 ~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~ 219 (310)
T TIGR01272 140 THLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAV 219 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 33444555555555455555666666443 369999999999999999999999999999999999999888877766
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchH
Q 012159 191 LATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWES 270 (470)
Q Consensus 191 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~ 270 (470)
++.++.. ..+. .......++.|++.+..+|...+...+..+ ++.+++.++. ....+|++++|++.|.+.+..|.+.
T Consensus 220 ~~~~l~~-~~~~-~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~-~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~ 295 (310)
T TIGR01272 220 LLSIGAA-LTHG-YVAMWFVLALGLFNSIMFPTIFSLALNALG-RHTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQL 295 (310)
T ss_pred HHHHHHH-HcCC-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchH
Confidence 6654443 3233 222345568899999999999999999887 4456677775 5677999999999999999999998
Q ss_pred HHHHHHHH
Q 012159 271 VFYIFGLL 278 (470)
Q Consensus 271 ~~~~~~~~ 278 (470)
.|++..+.
T Consensus 296 a~~v~~~~ 303 (310)
T TIGR01272 296 AFALPVPC 303 (310)
T ss_pred HHHHHHHH
Confidence 88754443
No 171
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.32 E-value=1.3e-10 Score=113.31 Aligned_cols=145 Identities=16% Similarity=0.140 Sum_probs=115.0
Q ss_pred HHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhh
Q 012159 137 IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIG 216 (470)
Q Consensus 137 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~ 216 (470)
.|.+.+++|++..+.+++...+.++..++.++.+++.||.+ |+.++.+.++..+..+++....++.+.+.+..++.|++
T Consensus 240 ~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~ 318 (394)
T PRK10213 240 RPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLT 318 (394)
T ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 46677888999999999999999999999999999999965 44444443443333333323445556777788999999
Q ss_pred ccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHH
Q 012159 217 EGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF 283 (470)
Q Consensus 217 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 283 (470)
.+...+...+++.+..| +++++..++.....++|..+||.++|++.+..|++..++..+++.++..
T Consensus 319 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 319 FALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTA 384 (394)
T ss_pred HHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHH
Confidence 99999999989998887 6677888888888999999999999999999999988888776654443
No 172
>PRK10054 putative transporter; Provisional
Probab=99.32 E-value=3.7e-11 Score=117.21 Aligned_cols=145 Identities=16% Similarity=0.052 Sum_probs=117.6
Q ss_pred hhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCch
Q 012159 142 HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSP 221 (470)
Q Consensus 142 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~ 221 (470)
++.+.+....+++.+...+.....+++.|++.||+++|+.+..+.++.+++..+.....++.+.+++..++.|++.+...
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 316 (395)
T PRK10054 237 ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYA 316 (395)
T ss_pred cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHH
Confidence 45567777888888888888888889999999999999999888877777766554333555667778889999988888
Q ss_pred hhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHHHHH
Q 012159 222 SAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFK 287 (470)
Q Consensus 222 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 287 (470)
|...+.+.+..|++.|+++++..+ ...+|..+||.++|.+.++.|....|++.+....+..+...
T Consensus 317 p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 317 PGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred hhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 888899999999999999998765 56689999999999999999998888887666554444433
No 173
>TIGR00895 2A0115 benzoate transport.
Probab=99.31 E-value=3e-11 Score=118.00 Aligned_cols=142 Identities=20% Similarity=0.196 Sum_probs=113.1
Q ss_pred HHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHh
Q 012159 120 SLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL 199 (470)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 199 (470)
.+..++..........+.|.+.+++|.+..+.++..++..++..++.++.|++.||+|+|+.+... .+.++...++...
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~ 334 (398)
T TIGR00895 256 WLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLL-LLGAVFAVLVGST 334 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHH-HHHHHHHHHHHHH
Confidence 333444444455556667788888999999999999999999999999999999999999544443 3333433333232
Q ss_pred hhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhh
Q 012159 200 AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI 262 (470)
Q Consensus 200 ~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 262 (470)
..+.+.+++..++.|++.+...+...+++.+.+|+++|++++|+......+|..+||+++|++
T Consensus 335 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 335 LFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred hhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 344466778888999999999999999999999999999999999999999999999999876
No 174
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.31 E-value=2.3e-11 Score=121.52 Aligned_cols=157 Identities=17% Similarity=0.132 Sum_probs=106.2
Q ss_pred HHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcH-------HHHHHHHHHHHHHHHHHHhhhHHH
Q 012159 133 LSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRK-------VLQTGVLIWSLATALLPLLAGFMP 204 (470)
Q Consensus 133 ~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~-------~~~~~~~~~~~~~~~~~~~~~~~~ 204 (470)
+...+|. +.+++|++..+.+.+.+++.++..++.+++|+++||++||+ .+.+..++.++..+++. ..++.+
T Consensus 271 ~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~-~~~~~~ 349 (476)
T PLN00028 271 MDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLG-RANSLG 349 (476)
T ss_pred HHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhc-ccchHH
Confidence 3334555 45678999999999999999999999999999999998652 22223333233333332 233334
Q ss_pred HHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHH
Q 012159 205 GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFS 284 (470)
Q Consensus 205 ~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ 284 (470)
..++..++.+++.+...+...+++.+..| +++|.+.|+.+.+..+|+.++|.+.+ ..+..+|+..|++.+++.++..+
T Consensus 350 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~ 427 (476)
T PLN00028 350 AAIVVMILFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTL 427 (476)
T ss_pred HHHHHHHHHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHH
Confidence 44445555666555444555556666554 78999999998888888888877654 22344699999999888877777
Q ss_pred HHHhhccC
Q 012159 285 GFKILQEG 292 (470)
Q Consensus 285 ~~~~~~~~ 292 (470)
+.++++.+
T Consensus 428 ~~~~~~~~ 435 (476)
T PLN00028 428 PVAFIHFP 435 (476)
T ss_pred HHHheecc
Confidence 76666533
No 175
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.31 E-value=3.4e-11 Score=119.24 Aligned_cols=162 Identities=13% Similarity=0.041 Sum_probs=107.5
Q ss_pred hhhhhHHHhHHhhh-hhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHH--HHHHHHh--hhH
Q 012159 128 MDKVNLSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA--TALLPLL--AGF 202 (470)
Q Consensus 128 ~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~--~~~~~~~--~~~ 202 (470)
..........|.+. +..|.++.+.++...++.++..++.+++|+++||+++++....+..+..+. .++.... ..+
T Consensus 265 ~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (438)
T TIGR00712 265 LLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGN 344 (438)
T ss_pred HHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 33334445666654 457999999999999999999999999999999996543222232221111 1111111 122
Q ss_pred HHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhH-HHHHHhhHHhhhcccCchHHHHHHHHHHHH
Q 012159 203 MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFG-SVAGLLLAPPIIENLGWESVFYIFGLLGIA 281 (470)
Q Consensus 203 ~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g-~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~ 281 (470)
.+...+..++.|++.............+.+|+++|++++|+.+....+| .+++|.+.|.+.++.||...|++.+++.++
T Consensus 345 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~ 424 (438)
T TIGR00712 345 PLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSIL 424 (438)
T ss_pred hHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHH
Confidence 2333344455555433332333456778999999999999998887776 578999999999999999999988777655
Q ss_pred HHHHHHhh
Q 012159 282 WFSGFKIL 289 (470)
Q Consensus 282 ~~~~~~~~ 289 (470)
..+..+.+
T Consensus 425 ~~~~~~~~ 432 (438)
T TIGR00712 425 AVILLIVV 432 (438)
T ss_pred HHHHHHHH
Confidence 54444443
No 176
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.30 E-value=7.7e-11 Score=114.94 Aligned_cols=151 Identities=15% Similarity=0.046 Sum_probs=114.0
Q ss_pred HhHHhhhhhcCCCchhhHHHHHHHHH-HHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhh-----hHHHHHHH
Q 012159 135 VAIIPMSHRFGWNSSVAGLVQSSFFW-GYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA-----GFMPGLVL 208 (470)
Q Consensus 135 ~~~~~~~~~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~ 208 (470)
...+.+.+|.|++++++|++..+..+ ...++.++.|++.||+|+|+++.++.++.++..+...... .+...++.
T Consensus 229 ~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (390)
T TIGR02718 229 GLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWS 308 (390)
T ss_pred HHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHH
Confidence 34555556789999999999888764 6667789999999999999999887666533332221111 12223344
Q ss_pred HHHHHHhhccCchhhHHHHhhhccCc-cchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHHH
Q 012159 209 SRVLVGIGEGVSPSAATDLIARSIPL-EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG 285 (470)
Q Consensus 209 ~~~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~ 285 (470)
..++.+++.+...+...+...+..++ +++++.+++.+...++|..+||.++|.+.++.|++..|++.+++.++..+.
T Consensus 309 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 309 CSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 44555666777777888888787765 789999999999999999999999999999999999999888776655443
No 177
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.30 E-value=1.9e-11 Score=121.14 Aligned_cols=148 Identities=16% Similarity=0.188 Sum_probs=113.4
Q ss_pred HHHHHHHhhhhhHHHhHHhhhhh-cCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHh
Q 012159 121 LAFVICNMDKVNLSVAIIPMSHR-FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL 199 (470)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 199 (470)
+..++............+.+.++ ++ +..+.+++.++..++..++.+++++++||+|+|+++.++.++.+++.++..+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~ 307 (437)
T TIGR00792 229 LAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFA 307 (437)
T ss_pred HHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc
Confidence 33333333333333334444333 34 56677888888899999999999999999999999999988877776665443
Q ss_pred hhHHHHHHHHHHHHHhhccCchhhHHHHhhhccC-------ccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCch
Q 012159 200 AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIP-------LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE 269 (470)
Q Consensus 200 ~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~ 269 (470)
.++.+.+++..++.|++.+...+...++++|..+ ++.+|.++|+.+....+|..+++.+.|.+.+..||.
T Consensus 308 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 308 GSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 3455667777888899999888999999988765 456799999999999999999999999999877763
No 178
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.30 E-value=5.6e-11 Score=116.17 Aligned_cols=141 Identities=12% Similarity=0.058 Sum_probs=115.7
Q ss_pred CCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhH
Q 012159 145 GWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAA 224 (470)
Q Consensus 145 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~ 224 (470)
+.+....|.+.++..+...++.+..|++.||+|+|+.+.++.++.++...+.. ..++.+.+++..++.|++........
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~-~~~~~~~~~~~~~l~g~~~~~~~~~~ 328 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSS-FATTALEVVILKMLHAFEVPFLLVGC 328 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHH-hcCChHHHHHHHHHHHHHHHHHHHHH
Confidence 55667789999999999999999999999999999999998888887766654 34555777888899998876665566
Q ss_pred HHHhhhccCccchhhHHHH-HHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHHHH
Q 012159 225 TDLIARSIPLEERSRAVSF-VFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGF 286 (470)
Q Consensus 225 ~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 286 (470)
..++.+..+++.++...+. .+....+|..++|.++|++.+..||+.+|.+.+++.++..+..
T Consensus 329 ~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 329 FKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 6677777787777777766 6788999999999999999999999999999888876655443
No 179
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.30 E-value=8.8e-11 Score=115.23 Aligned_cols=151 Identities=15% Similarity=0.000 Sum_probs=115.5
Q ss_pred HHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhh----hHHHHHH
Q 012159 133 LSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA----GFMPGLV 207 (470)
Q Consensus 133 ~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~----~~~~~l~ 207 (470)
.....|. +.+++|.++.+.++......++..++.++.|++.||+++|+.+.++.++.+++.++..... .+.+.++
T Consensus 234 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 313 (406)
T PRK15402 234 WIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLT 313 (406)
T ss_pred HHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHH
Confidence 3334555 4567899999999988888888999999999999999999999888777766665554322 3345567
Q ss_pred HHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHH
Q 012159 208 LSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFS 284 (470)
Q Consensus 208 ~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ 284 (470)
+..++.|++.+...+......... +++++|++.+.++....+|..+|+.+++.+.+..++....+..++..++..+
T Consensus 314 ~~~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 389 (406)
T PRK15402 314 AGLSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLL 389 (406)
T ss_pred HHHHHHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHH
Confidence 778888998887777666655444 4489999999999999999999999999999888876655555544444433
No 180
>TIGR00898 2A0119 cation transport protein.
Probab=99.29 E-value=1.7e-11 Score=123.84 Aligned_cols=150 Identities=17% Similarity=-0.027 Sum_probs=113.3
Q ss_pred hhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhH-HHHHHHHHHHHHhhc
Q 012159 139 PMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGF-MPGLVLSRVLVGIGE 217 (470)
Q Consensus 139 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~l~G~~~ 217 (470)
.....++.+.. +...+..+...++.++.+++.||+|||+.+.++.++.+++.+++....+. .+..++..++.+++.
T Consensus 348 ~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 424 (505)
T TIGR00898 348 LDLGNLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGI 424 (505)
T ss_pred ccccccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHH
Confidence 33444555433 33344566777888999999999999999999988887777666444332 234445556667777
Q ss_pred cCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHHHHHhhccCC
Q 012159 218 GVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGE 293 (470)
Q Consensus 218 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (470)
+..++....+..|.+|++.|++++|+.+....+|.+++|.+.+ + ...++..++++.+++.++..+..++++|++
T Consensus 425 ~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~lpet~ 498 (505)
T TIGR00898 425 TSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTLFLPETK 498 (505)
T ss_pred HHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHHcCcCCC
Confidence 7778888999999999999999999999999999999999998 4 345677788888888777777777776544
No 181
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.28 E-value=1.5e-10 Score=112.03 Aligned_cols=169 Identities=20% Similarity=0.273 Sum_probs=131.1
Q ss_pred HHHHHHHhhhhhHHHhHHhhhhhcC-CCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHh
Q 012159 121 LAFVICNMDKVNLSVAIIPMSHRFG-WNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL 199 (470)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~g-~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 199 (470)
+..++.......+..+.+.+.++.| .+....+.+.++..++-++.-...+++..|+|.|+++.++.+.+++=..+.+..
T Consensus 214 l~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~ 293 (400)
T PF03825_consen 214 LAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYF 293 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444555556666666777777777 777888888889999999999999999999999999999999999888787666
Q ss_pred hhHHHHHHH----HHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHh-hhhhHHHHHHhhHHhhhcccCchH----
Q 012159 200 AGFMPGLVL----SRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFG-GLSFGSVAGLLLAPPIIENLGWES---- 270 (470)
Q Consensus 200 ~~~~~~l~~----~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~g~~~---- 270 (470)
+++.+..++ ...+.|+..+..+.+...++.+..|++.|++++++++. ..++|..+|..++|++.+++|-+.
T Consensus 294 ~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~ 373 (400)
T PF03825_consen 294 SDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDW 373 (400)
T ss_pred cCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhH
Confidence 344343333 34569999999999999999999999999999999876 468999999999999999887554
Q ss_pred --HHHHHHHHHHHHHHHHHhh
Q 012159 271 --VFYIFGLLGIAWFSGFKIL 289 (470)
Q Consensus 271 --~~~~~~~~~~~~~~~~~~~ 289 (470)
.+.+.+++.++..++++.+
T Consensus 374 ~~~~~v~a~~~~~~~~~f~~~ 394 (400)
T PF03825_consen 374 SAVFLVFAVMALVILVLFVIL 394 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 3344444444444444333
No 182
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.28 E-value=8e-11 Score=116.78 Aligned_cols=176 Identities=21% Similarity=0.213 Sum_probs=152.0
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhc--CcHHHHHHHHHHHH
Q 012159 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFG--GRKVLQTGVLIWSL 191 (470)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g--~r~~~~~~~~~~~~ 191 (470)
+.++.+.+...+..+...+....+|.+.++.|.+..+.+.+.++..+...++.+..|+++|+.. ++.+..++.++.++
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl 377 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGL 377 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHH
Confidence 4556666777777788888888899999999999999999999999999999999999999988 44555666666666
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccC-chH
Q 012159 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WES 270 (470)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-~~~ 270 (470)
..+.++ ..++++.++...++.|++.|.........+.|..+.++-..+.|+...+.+++.++||+++|.+.+..| |..
T Consensus 378 ~~~~~p-~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~ 456 (509)
T KOG2504|consen 378 ARLFLP-FATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDH 456 (509)
T ss_pred HHHHHH-HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeee
Confidence 665554 556668999999999999999988888899999999999999999999999999999999999999887 999
Q ss_pred HHHHHHHHHHHHHHHHHhhc
Q 012159 271 VFYIFGLLGIAWFSGFKILQ 290 (470)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~ 290 (470)
.|+..++..++...+++..+
T Consensus 457 ~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 457 AFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred ehhhcChHHHHHHHHHHHhH
Confidence 99999998888777776666
No 183
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.28 E-value=4e-11 Score=111.70 Aligned_cols=162 Identities=19% Similarity=0.164 Sum_probs=134.0
Q ss_pred hhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 012159 130 KVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLS 209 (470)
Q Consensus 130 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 209 (470)
.+.+......-..++|++..+..++.....+..+++.+++|++.||+|.|+++.++.+++.+.++... .......+.++
T Consensus 269 ~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~-~~~~~~~f~i~ 347 (438)
T COG2270 269 NTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLI-FLEGELDFWIL 347 (438)
T ss_pred HHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHH-HccccHHHHHH
Confidence 33444444445569999999999999999999999999999999999999999999888877776553 33333667788
Q ss_pred HHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccC-chHHHHHHHHHHHHHHHHHHh
Q 012159 210 RVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVFYIFGLLGIAWFSGFKI 288 (470)
Q Consensus 210 ~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~ 288 (470)
..+.|++.|..+...-++..+..|+++-++.+|+++.....+..+||.+.+.+.+..| -|..+....++.++.++..+.
T Consensus 348 gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~ 427 (438)
T COG2270 348 GLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLR 427 (438)
T ss_pred HHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEe
Confidence 8999999999999999999999999999999999999999999999999999998765 676676666666666666665
Q ss_pred hccC
Q 012159 289 LQEG 292 (470)
Q Consensus 289 ~~~~ 292 (470)
.+.+
T Consensus 428 v~~~ 431 (438)
T COG2270 428 VKVP 431 (438)
T ss_pred ecCC
Confidence 5544
No 184
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.26 E-value=1e-10 Score=113.47 Aligned_cols=188 Identities=17% Similarity=0.085 Sum_probs=138.4
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHH
Q 012159 106 WKNIPQRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTG 185 (470)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 185 (470)
+++...|+.....+.+......-+...+..+...+.++.|++..+..+......+...+..+++..+.||+|||+.++++
T Consensus 262 ~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~ 341 (485)
T KOG0569|consen 262 LKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLIS 341 (485)
T ss_pred hcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHH
Confidence 34444455555555555555555566666667778899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhh---hHH--H---HHHHHHHHHHhhcc-CchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHH
Q 012159 186 VLIWSLATALLPLLA---GFM--P---GLVLSRVLVGIGEG-VSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGL 256 (470)
Q Consensus 186 ~~~~~~~~~~~~~~~---~~~--~---~l~~~~~l~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 256 (470)
..++.+..+++.... +.. | ..+++.++..++.+ +..|...-+.+|.+|++.|..++++......++..+-.
T Consensus 342 ~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~ 421 (485)
T KOG0569|consen 342 LSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVG 421 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHH
Confidence 888887776654321 111 1 22344444444333 34688899999999999999999999999999988888
Q ss_pred hhHHhhhcccCchHHHHHHHHHHHHH-HHHHHhhccCCC
Q 012159 257 LLAPPIIENLGWESVFYIFGLLGIAW-FSGFKILQEGET 294 (470)
Q Consensus 257 ~~~~~l~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 294 (470)
.....+.+.+|- ..|++..+.+++. +..+..+||++.
T Consensus 422 ~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkg 459 (485)
T KOG0569|consen 422 FAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKG 459 (485)
T ss_pred HHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCC
Confidence 888888887776 6677777766554 445556666554
No 185
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.26 E-value=1.3e-10 Score=116.08 Aligned_cols=177 Identities=16% Similarity=0.050 Sum_probs=118.8
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHH--------HH
Q 012159 114 KLIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVL--------QT 184 (470)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~--------~~ 184 (470)
+.++.+++..+........+...+|. +.+.+|.+..+.++..++..++..++.++.|+++||+++|+.. ..
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 340 (465)
T TIGR00894 261 LPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFN 340 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHH
Confidence 33445555566666666666667777 4566899999999999999999999999999999998654321 11
Q ss_pred HHHHH--HHHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhh
Q 012159 185 GVLIW--SLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI 262 (470)
Q Consensus 185 ~~~~~--~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 262 (470)
+.... ++..++......+....++...+.+.+.+...+.......+..| +.+|.++++.+....+|+.++|.+.|.+
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~ 419 (465)
T TIGR00894 341 GIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNI 419 (465)
T ss_pred HHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhhee
Confidence 11111 11111111112233334444455555555555555556667776 5899999999999999999999999998
Q ss_pred hccc---CchHHHHHHHHHHHHHHHHHHhhcc
Q 012159 263 IENL---GWESVFYIFGLLGIAWFSGFKILQE 291 (470)
Q Consensus 263 ~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~ 291 (470)
.+.. +|+..|++.+++.++..+....+.+
T Consensus 420 ~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~ 451 (465)
T TIGR00894 420 LSQDSKNVWLIVFLIMAFVNILCVIFYLIFGS 451 (465)
T ss_pred eCCCCchHHHHHHHHHHHHHHHHHHHeeeeec
Confidence 7653 3888888888877776666555443
No 186
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.24 E-value=1.3e-08 Score=96.54 Aligned_cols=266 Identities=12% Similarity=0.064 Sum_probs=182.4
Q ss_pred HhHHhhhhh-cCCCchhhH-HHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 012159 135 VAIIPMSHR-FGWNSSVAG-LVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVL 212 (470)
Q Consensus 135 ~~~~~~~~~-~g~s~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 212 (470)
...|.+.+. .|++..|+. -+.-+..=.+....++...+.|..+.|++++++.+...+...++ ...++...+-+..++
T Consensus 25 fl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~ll-l~~~sv~~mq~~q~~ 103 (412)
T PF01770_consen 25 FLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLL-LFGTSVLAMQLMQFF 103 (412)
T ss_pred cchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH-HHHCcHHHHHHHHHH
Confidence 345555554 788888765 45556666677788899999999999999999988877766665 466777899999999
Q ss_pred HHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcc--cCchHHHHHHHHHHHHHHHHHHhhc
Q 012159 213 VGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN--LGWESVFYIFGLLGIAWFSGFKILQ 290 (470)
Q Consensus 213 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~--~g~~~~~~~~~~~~~~~~~~~~~~~ 290 (470)
.|++.+. ..+..+++-...++++-.++.+...+...+|..++.++|..+... .+++...++......+.++..+++|
T Consensus 104 yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP 182 (412)
T PF01770_consen 104 YGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLP 182 (412)
T ss_pred HHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999765 678888888888999999999999999999999999999988763 3455565565555566666667777
Q ss_pred cCCCCCC--CCCC--Ccc---chhhhhhhhhhh---HHhhhcc---------CCCCCHHHHhcCHHHHHHHHHHHHHHHH
Q 012159 291 EGETSNG--ATLA--PRS---NYINMKKSLSAS---LEEMGES---------LKDVPWKAIFRSKAVWAMIYAHFCGSWG 351 (470)
Q Consensus 291 ~~~~~~~--~~~~--~~~---~~~~~~~~~~~~---~~~~~~~---------~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 351 (470)
.+++..- +... ... +.....+..... .++.... .-...+++..++|.++...+...+...+
T Consensus 183 ~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcg 262 (412)
T PF01770_consen 183 MPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCG 262 (412)
T ss_pred CCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhH
Confidence 6554211 0000 000 000000000000 0000000 0012345667889999999988888888
Q ss_pred HHHHHHHHHHHHHHH--hCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 012159 352 HYTCLSWLPTYFSEE--LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (470)
Q Consensus 352 ~~~~~~~~~~~~~~~--~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~ 402 (470)
+..+..+......+. -+-...-.|.+-+...+.+.++.+..|++..++.+.
T Consensus 263 y~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~ 315 (412)
T PF01770_consen 263 YYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRW 315 (412)
T ss_pred HHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHH
Confidence 888888888877754 133344567888888888888999999985555443
No 187
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.23 E-value=2.2e-10 Score=112.36 Aligned_cols=162 Identities=14% Similarity=0.087 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHhhhhhHHHhHHhhhhhc--CCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHH-HHHHHHHHHHHH
Q 012159 117 GTTSLAFVICNMDKVNLSVAIIPMSHRF--GWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKV-LQTGVLIWSLAT 193 (470)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-~~~~~~~~~~~~ 193 (470)
+...+.+++.......+...+|.+.+++ |.+..+.+...+...++..++.+++|+++||+++|+. +....++.+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~ 324 (412)
T TIGR02332 245 MLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGW 324 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHH
Confidence 3444455555555666677788877764 6678889999999999999999999999999998775 333333333333
Q ss_pred HHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccC-chHHH
Q 012159 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVF 272 (470)
Q Consensus 194 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-~~~~~ 272 (470)
++. ....+....+....+.+++.....+.......+.+|+++|++++|+.+....+|.+++|.+.|.+.+..| |++.+
T Consensus 325 ~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~ 403 (412)
T TIGR02332 325 LLA-SATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGL 403 (412)
T ss_pred HHH-HhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhH
Confidence 222 2222212222222233333333334444555677899999999999999999999999999999999875 99999
Q ss_pred HHHHHHH
Q 012159 273 YIFGLLG 279 (470)
Q Consensus 273 ~~~~~~~ 279 (470)
++.+++.
T Consensus 404 ~~~~~~~ 410 (412)
T TIGR02332 404 WFVAALL 410 (412)
T ss_pred HHHHHHH
Confidence 8876654
No 188
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.22 E-value=5.4e-09 Score=93.19 Aligned_cols=163 Identities=16% Similarity=0.125 Sum_probs=123.4
Q ss_pred HhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhh------
Q 012159 127 NMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA------ 200 (470)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~------ 200 (470)
....+.++.+-|.+.+.+|++..|...+.+...+|..+ .++.|.+.|++|++.++.++.+...++...+....
T Consensus 15 ~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~ 93 (250)
T PF06813_consen 15 SGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPS 93 (250)
T ss_pred cCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCc
Confidence 34566777888999999999999999999999999876 58899999999999999999998888887664332
Q ss_pred hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHH-
Q 012159 201 GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLG- 279 (470)
Q Consensus 201 ~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~- 279 (470)
..+|.+.+..++.|.+.+....+......+.|| ++||.+.|+.-...++++.+-..+...+.+. +-..-+...+...
T Consensus 94 ~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~-~~~~fll~la~~~~ 171 (250)
T PF06813_consen 94 LPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD-DPSSFLLFLAVLPA 171 (250)
T ss_pred cchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC-ChHHHHHHHHHHHH
Confidence 245677777777777776666777777778998 6899999999999999988877777666554 3333333444433
Q ss_pred HHHHHHHHhhccC
Q 012159 280 IAWFSGFKILQEG 292 (470)
Q Consensus 280 ~~~~~~~~~~~~~ 292 (470)
++.++...+++..
T Consensus 172 ~v~l~~~~~vr~~ 184 (250)
T PF06813_consen 172 VVCLVAMFFVRPV 184 (250)
T ss_pred HHHHHHhhheecc
Confidence 4444444444433
No 189
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.21 E-value=3.1e-10 Score=108.00 Aligned_cols=157 Identities=15% Similarity=0.106 Sum_probs=129.7
Q ss_pred hHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Q 012159 136 AIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGI 215 (470)
Q Consensus 136 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~ 215 (470)
+...+-++-+.+...+|.+.++..+.-++...+..++.+|+|.|+.++++..++++=..+++ ..++.+.+.+.+.+.|+
T Consensus 246 y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~-~~~~~~~i~~~klLH~~ 324 (412)
T PF01306_consen 246 YFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSG-FATNPWVISLIKLLHAL 324 (412)
T ss_dssp HHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH-T--SHHHHHHHHHHHHH
T ss_pred HHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHh-hhcchHHHHHHHHHHHH
Confidence 33344444455667899999999999999999999999999999999999999888877775 55666889999999999
Q ss_pred hccCchhhHHHHhhhccCccchhhHHHH-HHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHHHHHhhccCC
Q 012159 216 GEGVSPSAATDLIARSIPLEERSRAVSF-VFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGE 293 (470)
Q Consensus 216 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (470)
-.+.......-++++.+|++..++...+ .+...++|..+.+.++|.+.|+.|.+.+|++.+.+.++..++..+..+++
T Consensus 325 e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 325 EFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred HHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCC
Confidence 9999999999999999998888888888 47888999999999999999999999999999988776655555544433
No 190
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.21 E-value=8e-10 Score=107.69 Aligned_cols=175 Identities=15% Similarity=0.076 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHH
Q 012159 117 GTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (470)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 196 (470)
+.+++.+++.+.....++..+|.+.++ ..+.........+..+...+..+++|+++||+|+|+++.++.+...++....
T Consensus 255 Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~ 333 (462)
T PRK15034 255 WLLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALL 333 (462)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 344445555555555566666665443 2333333333445667788899999999999999999998887666665332
Q ss_pred HH-hh----hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCc---------------------cchhhHHHHHHhhhhh
Q 012159 197 PL-LA----GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL---------------------EERSRAVSFVFGGLSF 250 (470)
Q Consensus 197 ~~-~~----~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~---------------------~~r~~~~~~~~~~~~~ 250 (470)
.. .+ .+++.+.+..+...++.|........++.+++|+ ++-|.+.|+......+
T Consensus 334 ~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~ 413 (462)
T PRK15034 334 FLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAV 413 (462)
T ss_pred HHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHc
Confidence 22 22 2345555555555566666666777788888874 2568899999999999
Q ss_pred HHHHHHhhHHhhhcccC-chHHHHHHHHHHHHHHHHHHhhccC
Q 012159 251 GSVAGLLLAPPIIENLG-WESVFYIFGLLGIAWFSGFKILQEG 292 (470)
Q Consensus 251 g~~~g~~~~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (470)
|+.+-|.+.|...+..| +...|+...+..+++..+.+....+
T Consensus 414 Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~r 456 (462)
T PRK15034 414 GGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGR 456 (462)
T ss_pred ccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999988888887755 8888988888877776665555433
No 191
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.20 E-value=3e-08 Score=101.28 Aligned_cols=155 Identities=19% Similarity=0.206 Sum_probs=124.2
Q ss_pred hHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhh-hcCcHHHHHHHHHHHHHHHHHHHhhh-------HHHHHH
Q 012159 136 AIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQTGVLIWSLATALLPLLAG-------FMPGLV 207 (470)
Q Consensus 136 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~ 207 (470)
....+.+.+|++......+...+....-+..+++|+++|+ +|+++.+.++.++..++.++++..+. .....+
T Consensus 10 LvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l 89 (654)
T TIGR00926 10 LVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDL 89 (654)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHH
Confidence 3444566789999999999998888888999999999995 69999999999998888877753211 113456
Q ss_pred HHHHHHHhhccCchhhHHHHhhhccCcc---chhhHHHHHHhhhhhHHHHHHhhHHhhhcc-------cCchHHHHHHHH
Q 012159 208 LSRVLVGIGEGVSPSAATDLIARSIPLE---ERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-------LGWESVFYIFGL 277 (470)
Q Consensus 208 ~~~~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-------~g~~~~~~~~~~ 277 (470)
++..+.++|.|+.-|...+...|.++++ +|.+.+.++..+.++|+.+++++.+++.+. .+|...|.+.++
T Consensus 90 ~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i 169 (654)
T TIGR00926 90 LGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAI 169 (654)
T ss_pred HHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHH
Confidence 7778888999999999999999999754 367788889999999999999999988744 369999999888
Q ss_pred HHHHHHHHHHhhc
Q 012159 278 LGIAWFSGFKILQ 290 (470)
Q Consensus 278 ~~~~~~~~~~~~~ 290 (470)
+.++.+++.....
T Consensus 170 ~m~ia~lvf~~g~ 182 (654)
T TIGR00926 170 LMILALIVFMAGS 182 (654)
T ss_pred HHHHHHHHHHHhc
Confidence 8877766655443
No 192
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.20 E-value=8.5e-10 Score=106.15 Aligned_cols=141 Identities=14% Similarity=0.023 Sum_probs=108.4
Q ss_pred HHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhh-cCcHHHHHHHHHHHHHHHHHHHhhhHH
Q 012159 125 ICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF-GGRKVLQTGVLIWSLATALLPLLAGFM 203 (470)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~ 203 (470)
+..........++|.+.++.|.+..+.+.+.++..++..++.++.|++.||+ +||+.+.++.++.+++.+++.+..++
T Consensus 208 ~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 286 (355)
T TIGR00896 208 LQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMH- 286 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhh-
Confidence 3333344455567777778899999999999999999999999999999999 56666677767666666555433332
Q ss_pred HHHHHHHHHHHhhccCchhhHHHHhhhccC-ccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccC
Q 012159 204 PGLVLSRVLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG 267 (470)
Q Consensus 204 ~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 267 (470)
... ...++.|++.+...+...+.+.+..+ +++++...++.+....+|..++|.+.|++.++.|
T Consensus 287 ~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 287 GLW-AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHH-HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 222 24567899999988888787776554 4667899999999999999999999999998876
No 193
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.19 E-value=4.6e-10 Score=109.69 Aligned_cols=152 Identities=17% Similarity=0.136 Sum_probs=114.4
Q ss_pred HHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhh-hcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 012159 134 SVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVL 212 (470)
Q Consensus 134 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 212 (470)
...+|.+.++.+.++.+.+++.++..++...+..+.+++.|| ++.++.+..+.++.+++.++++ ..++.+.+++..++
T Consensus 228 ~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~l 306 (400)
T PRK11646 228 MLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIG-MVSNLQQLFTLICL 306 (400)
T ss_pred HHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHH
Confidence 345677666665577889999888887777666666777664 6666777777777777766554 34555666667778
Q ss_pred HHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhccc---C-chHHHHHHHHHHHHHHHHH
Q 012159 213 VGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL---G-WESVFYIFGLLGIAWFSGF 286 (470)
Q Consensus 213 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~---g-~~~~~~~~~~~~~~~~~~~ 286 (470)
.|++.+...|...+++.+..|+++||+++|+.+....+|..+||.++|++.++. + ....+++.+++.++..+..
T Consensus 307 ~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (400)
T PRK11646 307 FYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLAL 384 (400)
T ss_pred HHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHHH
Confidence 888888888888999999999999999999999999999999999999999874 3 3455555555555554443
No 194
>PRK10133 L-fucose transporter; Provisional
Probab=99.16 E-value=1.2e-09 Score=108.02 Aligned_cols=139 Identities=16% Similarity=0.114 Sum_probs=110.5
Q ss_pred hhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCc
Q 012159 141 SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS 220 (470)
Q Consensus 141 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~ 220 (470)
.+.+|.++.+.++....+.++..++.++.|++.||+|+|+++..+.++.+++.++.. ..++. ..+...++.|++.+..
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~-~~~~~-~~~~~~~l~glg~~~i 364 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISA-FAGGH-VGLIALTLCSAFMSIQ 364 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-HcCCh-HHHHHHHHHHHHHHHH
Confidence 356899999999999999999999999999999999999998888777665554443 33332 2345667889999999
Q ss_pred hhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccC-chHHHHHHHHHHHHHH
Q 012159 221 PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVFYIFGLLGIAWF 283 (470)
Q Consensus 221 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-~~~~~~~~~~~~~~~~ 283 (470)
+|...+...+..+ ++.+.+.++... ..+|+.++|++.|.+.+..| .+..|++..+..+...
T Consensus 365 ~P~~~s~a~~~~~-~~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~ 426 (438)
T PRK10133 365 YPTIFSLGIKNLG-QDTKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIF 426 (438)
T ss_pred HHHHHHHHHcccc-hhhccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 9999999999987 456778887764 44788899999999999887 7888887665544443
No 195
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.16 E-value=1.4e-09 Score=95.50 Aligned_cols=151 Identities=19% Similarity=0.144 Sum_probs=114.2
Q ss_pred HhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhc
Q 012159 138 IPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGE 217 (470)
Q Consensus 138 ~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~ 217 (470)
..+++.+|+|+...+.+.+......++.+++.|.++||+|++.+.+.+..+..+..=.. ..-+.+.-++...+.|+..
T Consensus 289 ~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~--l~Ft~lsPy~~m~~lGLsy 366 (459)
T KOG4686|consen 289 MFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSG--LFFTFLSPYTSMTFLGLSY 366 (459)
T ss_pred HHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhh--HHhhhccHHHHHHHHhhhH
Confidence 34788999999999999999999999999999999999999988887655544433221 1111234456677888887
Q ss_pred cCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccC---ch-HHHHHHHHHHHHHHHHHHhhc
Q 012159 218 GVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG---WE-SVFYIFGLLGIAWFSGFKILQ 290 (470)
Q Consensus 218 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g---~~-~~~~~~~~~~~~~~~~~~~~~ 290 (470)
+.........++...|+++.|++.|..++..++|-++.|+++|++.++-| |- .-|++.+.+++....+.+.+.
T Consensus 367 sllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~N 443 (459)
T KOG4686|consen 367 SLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYLN 443 (459)
T ss_pred HHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhee
Confidence 77766678888889999999999999999999999999999999998765 32 233444445555554444443
No 196
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.16 E-value=2.2e-10 Score=104.21 Aligned_cols=134 Identities=12% Similarity=0.047 Sum_probs=98.8
Q ss_pred HHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccch
Q 012159 158 FFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEER 237 (470)
Q Consensus 158 ~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r 237 (470)
..+.-..|.++.+++.||+|||+.+..+.+++++..++.....+. ....+..+..-++.++.+.+.+.+..|.+|.+.|
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~r-n~~tvllf~arafisg~fqvaYvYtPEVyPTavR 468 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTR-NAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVR 468 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCc-chhHHHHHHHHHHHhchheEEEEecCcccchhhh
Confidence 345556788999999999999999999999998888766433322 2222233333334455566778999999999999
Q ss_pred hhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHHHHHhhccCCC
Q 012159 238 SRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGET 294 (470)
Q Consensus 238 ~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (470)
+.+.|.......+|+++.|+++ +.....-..+..+.+.++++..++..++|-+++
T Consensus 469 atgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtk 523 (528)
T KOG0253|consen 469 ATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETK 523 (528)
T ss_pred hcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccC
Confidence 9999999999999999999999 333334445666777777777777777765544
No 197
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.14 E-value=1e-09 Score=106.71 Aligned_cols=139 Identities=20% Similarity=0.302 Sum_probs=101.8
Q ss_pred hHHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhh----hHHHHH
Q 012159 132 NLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA----GFMPGL 206 (470)
Q Consensus 132 ~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~----~~~~~l 206 (470)
......|. +.+++|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+.++..++.+++.... +....+
T Consensus 224 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (385)
T TIGR00710 224 AFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMI 303 (385)
T ss_pred HHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHH
Confidence 33444555 4557899999999999999999999999999999999999998888777666665543321 233455
Q ss_pred HHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhh-HHHHHHhhHHhhhcccCchHHH
Q 012159 207 VLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSF-GSVAGLLLAPPIIENLGWESVF 272 (470)
Q Consensus 207 ~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~g~~~~~ 272 (470)
++..++.|++.+...+.......|..| ++++++.++.+..... |.+.+|. .+.+.+..+|...+
T Consensus 304 ~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~-~~~~~~~~~~~~~~ 368 (385)
T TIGR00710 304 IGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYL-VSLIHGNTAWPMSL 368 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHH-HHhccccChHHHHH
Confidence 566778889888888888888888876 7899999998877665 4555554 44444443444333
No 198
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.12 E-value=2e-09 Score=106.33 Aligned_cols=151 Identities=20% Similarity=0.174 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHhhhhhHHHhHHhhhhh-cCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHH
Q 012159 117 GTTSLAFVICNMDKVNLSVAIIPMSHR-FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATAL 195 (470)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 195 (470)
..+++..++............+++.++ +|.+ ...+.+..+..++..++.+++++++||+|+|+++..+.++.+++.++
T Consensus 228 ~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~ 306 (428)
T PF13347_consen 228 RILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLL 306 (428)
T ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHH
Confidence 344445555566666666666665554 4544 67788888999999999999999999999999999999999998887
Q ss_pred HHHhh-hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCc-------cchhhHHHHHHhhhhhHHHHHHhhHHhhhcccC
Q 012159 196 LPLLA-GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL-------EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG 267 (470)
Q Consensus 196 ~~~~~-~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 267 (470)
..+.. ++.+.+++..++.|++.+...+...++++|..+. ++.|..+|..+....+|..+++.+.+.+.+..|
T Consensus 307 ~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 307 LFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred HHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhC
Confidence 76555 5778999999999999999999999999998863 345889999999999999999999998887665
Q ss_pred c
Q 012159 268 W 268 (470)
Q Consensus 268 ~ 268 (470)
+
T Consensus 387 y 387 (428)
T PF13347_consen 387 Y 387 (428)
T ss_pred c
Confidence 4
No 199
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.12 E-value=2.8e-07 Score=89.03 Aligned_cols=299 Identities=10% Similarity=-0.035 Sum_probs=173.3
Q ss_pred HHHHHHHHHHHHhhhhhHHHhHHhhhhhc-CCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHH----
Q 012159 116 IGTTSLAFVICNMDKVNLSVAIIPMSHRF-GWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS---- 190 (470)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~---- 190 (470)
...+....++...+.-...+..+.+..+. .-+---.+...-+-.+..++..+..|.+.||..|.+++..+.+.--
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~ 83 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVA 83 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHH
Confidence 44566777888887778888888765555 3344444555555666777888999999999999988776643221
Q ss_pred HHHHHHH--Hhh-h-----H--HHHHHHHHHHHHhhccCchhh-HHHHhhhcc------CccchhhHHHHHHhhhhhHHH
Q 012159 191 LATALLP--LLA-G-----F--MPGLVLSRVLVGIGEGVSPSA-ATDLIARSI------PLEERSRAVSFVFGGLSFGSV 253 (470)
Q Consensus 191 ~~~~~~~--~~~-~-----~--~~~l~~~~~l~G~~~~~~~~~-~~~~i~~~~------~~~~r~~~~~~~~~~~~~g~~ 253 (470)
+++.++. +.. . . ...+++.-.+.|.-.-..... ..+.=.||. +++.+.+.++.+.-.-.+.-+
T Consensus 84 ~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckl 163 (432)
T PF06963_consen 84 ASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKL 163 (432)
T ss_pred HHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHH
Confidence 1111111 111 1 1 112222222222221111111 111112332 345566777777777788999
Q ss_pred HHHhhHHhhhcccCchHHHHHHHHHHHHHHHHHHhhc----cCCCCCCCCCCCccch-h-hh-----hhhhhhhHHhhh-
Q 012159 254 AGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQ----EGETSNGATLAPRSNY-I-NM-----KKSLSASLEEMG- 321 (470)
Q Consensus 254 ~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~-~~-----~~~~~~~~~~~~- 321 (470)
++|++.|.+....+.+...++.++..++....=+++. +..|.-..++..++.. . .. .+..........
T Consensus 164 laPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (432)
T PF06963_consen 164 LAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEESSSESSSDPSILKRLWN 243 (432)
T ss_pred HHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccccccccccccccchhhHHHHHHH
Confidence 9999999999988988888877777666544322221 1111111110000000 0 00 000000000000
Q ss_pred -ccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012159 322 -ESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLI 400 (470)
Q Consensus 322 -~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~ 400 (470)
-......|+..++++.+.......+++ +...++......|+... |+++...|.+-+...+.++.++++.+++.+|+|
T Consensus 244 ~~~~~~~~w~~Y~~q~vflas~alalLY-~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riG 321 (432)
T PF06963_consen 244 PLRTIIRGWRTYFRQPVFLASFALALLY-FTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIG 321 (432)
T ss_pred HHHHHhccHHHHHhCHHHHHHHHHHHHH-HHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 111235677888887665544444444 44556678888899865 999999999999999999999999999999999
Q ss_pred hcCCcchHHHHHHhhhhHHH
Q 012159 401 ATGVETTMGITNTVGAVPGI 420 (470)
Q Consensus 401 ~~~~~~~~g~~~~~~~~~~~ 420 (470)
..+. |...........
T Consensus 322 lvr~----G~~~l~~q~~~L 337 (432)
T PF06963_consen 322 LVRA----GLWSLWWQWVCL 337 (432)
T ss_pred chhh----HHHHHHHHHHHH
Confidence 7763 444444444333
No 200
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.12 E-value=1.6e-09 Score=101.77 Aligned_cols=282 Identities=12% Similarity=0.052 Sum_probs=167.7
Q ss_pred HHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhh----hcCcHHHHHHH-HHHH
Q 012159 116 IGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI----FGGRKVLQTGV-LIWS 190 (470)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~g~r~~~~~~~-~~~~ 190 (470)
++.+....+...+.+..-..+.+++.+++|++....+.+..+.-+...+.+++.|..+|| +||||.++... +..+
T Consensus 34 li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~ 113 (498)
T KOG0637|consen 34 LISVASIAAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIA 113 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHH
Confidence 334444444555666666667888888999999999999999999999999999999995 89888776654 4444
Q ss_pred HHHHHHHHhhhH----------------HHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhh-HHHHHHhhhhhHHH
Q 012159 191 LATALLPLLAGF----------------MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSR-AVSFVFGGLSFGSV 253 (470)
Q Consensus 191 ~~~~~~~~~~~~----------------~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~g~~ 253 (470)
++.+++.+.++- ...+++...+.-++.-......-+++.|....+++.+ +++.+..+..+|+.
T Consensus 114 ~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnv 193 (498)
T KOG0637|consen 114 VSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNV 193 (498)
T ss_pred HHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcce
Confidence 555554433321 1234455555556666778888999999997777766 99999999999999
Q ss_pred HHHhhHHhhhccc--C---chHHHHHHHHHHHHHHHHH-HhhccCCCC--CC--CCCCCccchhhhhhhhhhhHHhhhcc
Q 012159 254 AGLLLAPPIIENL--G---WESVFYIFGLLGIAWFSGF-KILQEGETS--NG--ATLAPRSNYINMKKSLSASLEEMGES 323 (470)
Q Consensus 254 ~g~~~~~~l~~~~--g---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (470)
+|..+++++--+. . -...+..+..+-...+.-. +...++... .. ++...+....+.........+|...
T Consensus 194 LGY~~g~y~~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~~~~~~~~~~~~~~~~~e~fG- 272 (498)
T KOG0637|consen 194 LGYALGSYLGLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSPKGTTARSKSSKLPFLLEIFG- 272 (498)
T ss_pred eeeecccccCceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheecccccccccccCCCCCcccccccccCcchHHHHhc-
Confidence 9988887432110 1 1122222222211111111 111111000 00 0000000000000000000011100
Q ss_pred CCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCch----------------hhHHHHHHHHHHHH
Q 012159 324 LKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSE-ELSLNLT----------------EAAWVSILPPLASV 386 (470)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~----------------~~~~~~~~~~~~~~ 386 (470)
.-....|..|.+++...+.+++++.+.-|...++-+ .++-++. ...+-..++.+...
T Consensus 273 ------~~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lg 346 (498)
T KOG0637|consen 273 ------ALKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLG 346 (498)
T ss_pred ------hHhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHH
Confidence 111234778999999999999998888888877643 3333221 11244566777778
Q ss_pred HHHHHHHHHHHHHHhcCC
Q 012159 387 LVTSIAAQFADNLIATGV 404 (470)
Q Consensus 387 ~~~~~~g~l~dr~~~~~~ 404 (470)
+.++...++.+|+|.|+.
T Consensus 347 i~S~~~~~l~~~~g~r~~ 364 (498)
T KOG0637|consen 347 IYSLLVEKLSRKFGTRKR 364 (498)
T ss_pred HHHHHHHHHHHhcCcceE
Confidence 888889999999995543
No 201
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.12 E-value=2.9e-09 Score=102.49 Aligned_cols=167 Identities=15% Similarity=-0.029 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcC---cHHHHH-HHHHHHHH
Q 012159 117 GTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGG---RKVLQT-GVLIWSLA 192 (470)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~---r~~~~~-~~~~~~~~ 192 (470)
+.+.+..++.......+...+|.+.++.|++.. .+...++..+...++ .++++||..| |+.... ..++.++.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~ 270 (368)
T TIGR00903 195 WIIGAILGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAF 270 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHH
Confidence 444455555555566666778887777888764 566666666555555 4677777654 343332 33333333
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHH
Q 012159 193 TALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF 272 (470)
Q Consensus 193 ~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~ 272 (470)
..+.. ...+....++...+.|++.....+...++.+|.+|++.|++++|+.+....+|+.++|++.+.+.. |.+..|
T Consensus 271 ~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f 347 (368)
T TIGR00903 271 FLALA-FELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYF 347 (368)
T ss_pred HHHHH-HccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHH
Confidence 33332 222223445555667777777778888999999999999999999999999999999999988773 777888
Q ss_pred HHHHHHHHHHHHHHHhhc
Q 012159 273 YIFGLLGIAWFSGFKILQ 290 (470)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~ 290 (470)
.+.++..++..+..+.++
T Consensus 348 ~~~~~~~~i~~~~~~~~~ 365 (368)
T TIGR00903 348 TFLAILITIAFAIALLLP 365 (368)
T ss_pred HHHHHHHHHHHHHHHhCC
Confidence 888877776666554333
No 202
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.10 E-value=3.3e-09 Score=103.53 Aligned_cols=138 Identities=16% Similarity=0.135 Sum_probs=92.1
Q ss_pred hHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 012159 136 AIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVG 214 (470)
Q Consensus 136 ~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G 214 (470)
..|. +.+++|.+..+.+.+.+...++..++.++.+++.||+|+|+++.++..+..++.+++...... +..+....+.+
T Consensus 225 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~ 303 (392)
T PRK10473 225 TSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSH-AVSLFGITLIC 303 (392)
T ss_pred hCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 3444 456789999999999999999999999999999999999999999888777777665433322 33333334444
Q ss_pred hhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHH
Q 012159 215 IGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLG 279 (470)
Q Consensus 215 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 279 (470)
.+.+...+.. ...+..|.++|+ +.......++..+|+.+++++.++.|+.....+.+.+.
T Consensus 304 ~g~~~~~~~~--~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 363 (392)
T PRK10473 304 AGFSVGFGVA--MSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIGILI 363 (392)
T ss_pred HHHHHHhHHH--HHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 4433333322 223344444443 44445556777888888888888878776555555443
No 203
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.10 E-value=2.7e-09 Score=118.87 Aligned_cols=146 Identities=18% Similarity=0.176 Sum_probs=118.5
Q ss_pred HHHhHHh-hhhhcCCCch-hhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 012159 133 LSVAIIP-MSHRFGWNSS-VAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSR 210 (470)
Q Consensus 133 ~~~~~~~-~~~~~g~s~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 210 (470)
....+|. +.+.+|.+.. +.+++.++..++.+++.+++|++.||+++++++.++.++.+++.+++. ...+.+.+++..
T Consensus 251 ~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 329 (1146)
T PRK08633 251 AQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLP-TAPSLASVLVLF 329 (1146)
T ss_pred HHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHH-HhhhHHHHHHHH
Confidence 3344444 5677899998 999999999999999999999999999999988888887777766664 344557777888
Q ss_pred HHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcc-cCchHHHHHHHHHH
Q 012159 211 VLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-LGWESVFYIFGLLG 279 (470)
Q Consensus 211 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~g~~~~~~~~~~~~ 279 (470)
++.|++.+...+...+++.+..|++.||+++|+.+....+|.++++.+++.+... +++...|++.+.+.
T Consensus 330 ~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 399 (1146)
T PRK08633 330 FLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVT 399 (1146)
T ss_pred HHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 9999999998899999999999999999999999999999998888888776542 34555666555543
No 204
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.09 E-value=1.8e-07 Score=91.35 Aligned_cols=280 Identities=10% Similarity=0.003 Sum_probs=171.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCC-----CchhhHHHHHHHHHHHHHh-hhhhHHHhhhhcCcHHHHHHH
Q 012159 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGW-----NSSVAGLVQSSFFWGYALS-QLPGGWLAKIFGGRKVLQTGV 186 (470)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----s~~~~~~~~~~~~~~~~~~-~~~~g~l~dr~g~r~~~~~~~ 186 (470)
++.+..+.+.+|+..+..+. +-.+.|.+.. +.+.+.++-+...+...+. .++.+++++|++|++++.+..
T Consensus 6 ~~k~~~~~l~fF~il~~Y~i----LR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~ 81 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYTI----LRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVI 81 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHH
Confidence 34455555555555554443 3345555544 4467888888887777766 889999999999999988877
Q ss_pred HHHHHHHHHHHHhh----hH--------------------------HHHHHHHHHHHHhhccCchh-hHHHHhhhccCcc
Q 012159 187 LIWSLATALLPLLA----GF--------------------------MPGLVLSRVLVGIGEGVSPS-AATDLIARSIPLE 235 (470)
Q Consensus 187 ~~~~~~~~~~~~~~----~~--------------------------~~~l~~~~~l~G~~~~~~~~-~~~~~i~~~~~~~ 235 (470)
..+.....++++.- +. .|...+..+...+....... ...+..+|.++.+
T Consensus 82 ~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~ 161 (472)
T TIGR00769 82 SPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTID 161 (472)
T ss_pred HHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH
Confidence 66666555554330 00 13333444444554445554 7789999999999
Q ss_pred chhhHHHHHHhhhhhHHHHHHhhHHhhhc-------cc-Cch----HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCc
Q 012159 236 ERSRAVSFVFGGLSFGSVAGLLLAPPIIE-------NL-GWE----SVFYIFGLLGIAWFSGFKILQEGETSNGATLAPR 303 (470)
Q Consensus 236 ~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-------~~-g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (470)
+-.|..++...+.++|.++++.+..++.+ .. .|. ..+.+.+++.++...+...+.+....++... +.
T Consensus 162 qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~~~~~~~~-~~ 240 (472)
T TIGR00769 162 EAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNVLTDPRSY-NP 240 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccc-ch
Confidence 99999999999999999999999888763 11 232 2333333334444444444432221111000 00
Q ss_pred cchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchh----hHHHHH
Q 012159 304 SNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTE----AAWVSI 379 (470)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~----~~~~~~ 379 (470)
++ +..++..+..-..+++.++++|-++.+++...+++.+...+....-..+.+.+- ++.+ .|.+..
T Consensus 241 ~~---------~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p-~~~~~~~f~g~~~~ 310 (472)
T TIGR00769 241 AL---------KEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYP-SPNEYSAFMGDFST 310 (472)
T ss_pred hh---------ccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHH
Confidence 00 000000011112346778999999998888888888877777666666665542 3322 234445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcch
Q 012159 380 LPPLASVLVTSIAAQFADNLIATGVETT 407 (470)
Q Consensus 380 ~~~~~~~~~~~~~g~l~dr~~~~~~~~~ 407 (470)
..++..++.+++.+++.+|+|.+.....
T Consensus 311 ~~gi~tl~~~l~~~~l~~~~Gw~~~a~i 338 (472)
T TIGR00769 311 WTGVVSVTMMLLSGNVIRKYGWLTAALI 338 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 5566666667777999999998754443
No 205
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.09 E-value=7e-10 Score=106.39 Aligned_cols=136 Identities=26% Similarity=0.302 Sum_probs=109.9
Q ss_pred HHHHHHHhhhhhHHHhHHhh-hhhcCCC-chhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHH
Q 012159 121 LAFVICNMDKVNLSVAIIPM-SHRFGWN-SSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL 198 (470)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~-~~~~g~s-~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 198 (470)
...+.............|.+ .+++|.+ ..+.+.+.++..+...++.++.|++.||+++|+...+......+..+.+..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (352)
T PF07690_consen 213 IAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLL 292 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHH
Confidence 33333334444566677774 8889999 799999999999999999999999999999988877776666666555533
Q ss_pred hh--hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHH
Q 012159 199 LA--GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGL 256 (470)
Q Consensus 199 ~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 256 (470)
.. ++....++..++.|++.+...+....++.+.+|+++||++.|+.+...++|..+||
T Consensus 293 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 293 LPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp SHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 22 23456666788899999999999999999999999999999999999999999987
No 206
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.09 E-value=6.8e-09 Score=101.24 Aligned_cols=147 Identities=16% Similarity=0.082 Sum_probs=113.4
Q ss_pred hhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcc
Q 012159 139 PMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEG 218 (470)
Q Consensus 139 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~ 218 (470)
.+.+.+|.++.+.|++.+...++..++++..+++.||.++|+++..+.+ .++..+++. ..++++..++..++.|++.+
T Consensus 231 ~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~-~~~~~~~~~~~~~~~G~~~g 308 (393)
T PRK11195 231 WAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMA-LQHSLLPAYPLLILIGALGG 308 (393)
T ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHH-HHhHHHHHHHHHHHHHHhhh
Confidence 3556689999999999999999999999999999999999988877753 344433333 34455666677778999988
Q ss_pred CchhhHHHHhhhccCccc-hhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHHHHHh
Q 012159 219 VSPSAATDLIARSIPLEE-RSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKI 288 (470)
Q Consensus 219 ~~~~~~~~~i~~~~~~~~-r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 288 (470)
...+...+.+.+..|++. +|++.++.+....+|..++..+.+.+ +.+|-+..+++.++..++.+...+.
T Consensus 309 ~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (393)
T PRK11195 309 FFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMALL 378 (393)
T ss_pred hhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 888888888888766544 79999999999999999999999865 5678777777755554444443333
No 207
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.08 E-value=2e-09 Score=119.47 Aligned_cols=161 Identities=12% Similarity=0.030 Sum_probs=122.5
Q ss_pred HHHHHHHHhhhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHH
Q 012159 120 SLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL 198 (470)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 198 (470)
.+..++..+....+...+|. +.+.+|.+..+.|++.+.+.++.+++.++.|+++|+.++++.+..+.++.+++.+.+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 310 (1140)
T PRK06814 231 ILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAF 310 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHh
Confidence 33333333333444445565 45568999999999999999999999999999999888777666665555554443332
Q ss_pred h-------------------hhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhH
Q 012159 199 L-------------------AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA 259 (470)
Q Consensus 199 ~-------------------~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 259 (470)
. ..+.+.+++..++.|++.+...+...+++.+.+|++.||+++|+.+....+|..++++++
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~ 390 (1140)
T PRK06814 311 ASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIIL 390 (1140)
T ss_pred cccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHH
Confidence 1 144467778888999999999999999999999999999999999999999999999999
Q ss_pred Hhhhc-ccCchHHHHHHHHHHH
Q 012159 260 PPIIE-NLGWESVFYIFGLLGI 280 (470)
Q Consensus 260 ~~l~~-~~g~~~~~~~~~~~~~ 280 (470)
+.+.+ ..++...+++.+++.+
T Consensus 391 g~l~~~~~~~~~~~~~~~~~~~ 412 (1140)
T PRK06814 391 ALLQALGFSIPWIILFIALANL 412 (1140)
T ss_pred HHHHHhccCHHHHHHHHHHHHH
Confidence 99874 4566766666555433
No 208
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.06 E-value=5.1e-09 Score=101.63 Aligned_cols=128 Identities=17% Similarity=0.062 Sum_probs=89.2
Q ss_pred HHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHH---HhhhHHHHHHH
Q 012159 133 LSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP---LLAGFMPGLVL 208 (470)
Q Consensus 133 ~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~ 208 (470)
+....|. +.+.+|.++.+.+++.+...++..++.++.|++.||+|+|+.+.++.++..+..+... ....+.+.+.+
T Consensus 213 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (377)
T PRK11102 213 FLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVV 292 (377)
T ss_pred HHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 3334444 5566899999999999999999999999999999999999999888765443332221 12223344444
Q ss_pred HHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhh-hhhHHHHHHhhHHh
Q 012159 209 SRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGG-LSFGSVAGLLLAPP 261 (470)
Q Consensus 209 ~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~g~~~g~~~~~~ 261 (470)
...+.+.+.+...+.....+.+..| ++++++.++.+.. ..+|..+++++++.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~~ 345 (377)
T PRK11102 293 GVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSLA 345 (377)
T ss_pred HHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4445555555555666667777766 8899999987654 45777777776553
No 209
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.06 E-value=2.3e-09 Score=107.80 Aligned_cols=143 Identities=16% Similarity=0.130 Sum_probs=115.6
Q ss_pred HHHHHHhhhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhh
Q 012159 122 AFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA 200 (470)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 200 (470)
..++..........+.|. ++..+|.++.+.|+......++..++.++.|++.||+|+|+.+..+.++.+++..++....
T Consensus 267 ~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~ 346 (495)
T PRK14995 267 MAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTD 346 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 333333333444455565 5556899999999999999999999999999999999999998888887777665543322
Q ss_pred --hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhc
Q 012159 201 --GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE 264 (470)
Q Consensus 201 --~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 264 (470)
++.+...+..++.|++.+...+.....+.+..|+++++.+.++++....+|..+|+.+.+.+.+
T Consensus 347 ~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 347 FSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred CCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345566778899999999888888899999999999999999999999999999999998865
No 210
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.05 E-value=1.9e-08 Score=92.12 Aligned_cols=169 Identities=17% Similarity=0.089 Sum_probs=133.4
Q ss_pred HHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhh-cCcHHHHHHHHHHHHHHHHHH
Q 012159 119 TSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF-GGRKVLQTGVLIWSLATALLP 197 (470)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~ 197 (470)
+.+.+-+..+..++....+|.+..|.|+|..+.|++.++..+......+....+.+|. ++|+..+...+++.++.+.+.
T Consensus 213 vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~ 292 (395)
T COG2807 213 VTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLL 292 (395)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH
Confidence 3344445556667777889999999999999999999999999999999999999965 567777777777777776665
Q ss_pred HhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhcc-CccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccC-chHHHHHH
Q 012159 198 LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSI-PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVFYIF 275 (470)
Q Consensus 198 ~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-~~~~~~~~ 275 (470)
+.+.+.+.+. .++.|+|.|..++.....+.+.. ++++-++..|+.+..+.+=..+||.+.|++.|..| |+..+...
T Consensus 293 ~~P~~~~~lw--~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l 370 (395)
T COG2807 293 LAPGQLPILW--ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLL 370 (395)
T ss_pred HhhhhHHHHH--HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHH
Confidence 4444322222 58999999999999999999887 44566778888899999999999999999999875 99888887
Q ss_pred HHHHHHHHHHHHhh
Q 012159 276 GLLGIAWFSGFKIL 289 (470)
Q Consensus 276 ~~~~~~~~~~~~~~ 289 (470)
+...++..+.-+..
T Consensus 371 ~~~~i~m~i~Gl~a 384 (395)
T COG2807 371 ALATLLMLIFGLRA 384 (395)
T ss_pred HHHHHHHHHHHhhc
Confidence 77766665554443
No 211
>PRK09848 glucuronide transporter; Provisional
Probab=99.04 E-value=1.7e-09 Score=107.52 Aligned_cols=149 Identities=14% Similarity=0.098 Sum_probs=110.8
Q ss_pred HHHHHHHHhhhhhHHHhHHhh-hhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHH
Q 012159 120 SLAFVICNMDKVNLSVAIIPM-SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL 198 (470)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 198 (470)
.+..++............|.+ .+.+|.+....++......++..++.++++++.||+|+|+++.++.++.+++.+++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~ 313 (448)
T PRK09848 234 CIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFW 313 (448)
T ss_pred HHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 333334444444444445553 4456766655555555556778889999999999999999999998887777666543
Q ss_pred hh-hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCcc-------chhhHHHHHHhhhhhHHHHHHhhHHhhhcccCc
Q 012159 199 LA-GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE-------ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 268 (470)
Q Consensus 199 ~~-~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~ 268 (470)
.. ++.+.+++..++.|+|.+...+...++.+|..+.+ ++|..+|+.+....+|..+|+.+.+.+.+..|+
T Consensus 314 ~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 314 VSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 32 34566667778899999999999999999988654 358999999999999999999999998876665
No 212
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.03 E-value=2.9e-09 Score=106.43 Aligned_cols=151 Identities=13% Similarity=0.007 Sum_probs=111.5
Q ss_pred HHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHH
Q 012159 118 TTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP 197 (470)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 197 (470)
.+++..++............+.+.+....+....+++.++..++.+++.++++++.||+|+|+.+.++.++..++.+...
T Consensus 235 ~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~ 314 (473)
T PRK10429 235 CLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLL 314 (473)
T ss_pred HHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHH
Confidence 33344444444445555555555555444566777788888889999999999999999999999888776655554432
Q ss_pred H----hhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccC-------ccchhhHHHHHHhhhhhHHHHHHhhHHhhhccc
Q 012159 198 L----LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIP-------LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL 266 (470)
Q Consensus 198 ~----~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 266 (470)
. ..++.+.+++..++.|++.+...+...++++|..+ .+..|..+|.......+|..+++.+.|++.+..
T Consensus 315 ~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~ 394 (473)
T PRK10429 315 LMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLI 394 (473)
T ss_pred HHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 2 13445666777788899999999999999999865 334466889999999999999999999998776
Q ss_pred Cc
Q 012159 267 GW 268 (470)
Q Consensus 267 g~ 268 (470)
|+
T Consensus 395 Gy 396 (473)
T PRK10429 395 GY 396 (473)
T ss_pred CC
Confidence 65
No 213
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.03 E-value=3.1e-09 Score=106.86 Aligned_cols=141 Identities=16% Similarity=0.204 Sum_probs=114.2
Q ss_pred HHHhhhhhHHHhHHhh-hhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHH-h--h
Q 012159 125 ICNMDKVNLSVAIIPM-SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL-L--A 200 (470)
Q Consensus 125 ~~~~~~~~~~~~~~~~-~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-~--~ 200 (470)
+...........+|.+ .+.+|.++.+.++......++..++.++.|++.||+|||+++.++..+.+++..++.. . .
T Consensus 266 ~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 345 (485)
T TIGR00711 266 LLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPD 345 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 3333334444556664 4558999999999999999999999999999999999999999988887777766541 1 1
Q ss_pred hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcc
Q 012159 201 GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN 265 (470)
Q Consensus 201 ~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 265 (470)
.+.+.++...++.|++.+...+.......+..|+++++++.|+.+....+|..+|+.+.+.+.++
T Consensus 346 ~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 346 TPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23455666788899999888877778888888999999999999999999999999999988765
No 214
>PRK11043 putative transporter; Provisional
Probab=99.01 E-value=2.2e-08 Score=98.12 Aligned_cols=137 Identities=11% Similarity=0.091 Sum_probs=103.3
Q ss_pred HHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHH----hhhHHHHHHH
Q 012159 133 LSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL----LAGFMPGLVL 208 (470)
Q Consensus 133 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~ 208 (470)
+....|.+.+++|.+..+.++......++..++.+..+++.||+|+|+.+....++.+++.+.+.. ..++.+.+++
T Consensus 222 ~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (401)
T PRK11043 222 WLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLI 301 (401)
T ss_pred HHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHH
Confidence 344567777788999999999888888999999999999999999998766555444443332211 1233445556
Q ss_pred HHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchH
Q 012159 209 SRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWES 270 (470)
Q Consensus 209 ~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~ 270 (470)
...+.|++.+...+...+...+..| +++++++|+++.....+..+++.+.+.+.+......
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 362 (401)
T PRK11043 302 PFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALISTPLLTT 362 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCCChhHH
Confidence 6677888888888888888777776 689999999999888888999999998877543433
No 215
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.00 E-value=7.2e-09 Score=99.75 Aligned_cols=124 Identities=15% Similarity=0.103 Sum_probs=98.6
Q ss_pred HHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHH-HHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhh----
Q 012159 126 CNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFF-WGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA---- 200 (470)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~---- 200 (470)
............|.+.+++|++..+.+.+.++.. ++..++.+++|++.||+|+|+.+.++.++.++...+..+..
T Consensus 221 ~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~ 300 (356)
T TIGR00901 221 YKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGH 300 (356)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 3344444555566665669999999998888766 57789999999999999999998888887777665543332
Q ss_pred ------hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhh
Q 012159 201 ------GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLS 249 (470)
Q Consensus 201 ------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 249 (470)
++.+.+..+.++.+++.+...+...+++.+.+|+++||+.+|+.++..+
T Consensus 301 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 301 HDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred ccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 3346677788888999999999999999999999999999999887654
No 216
>PRK09669 putative symporter YagG; Provisional
Probab=98.94 E-value=1.5e-08 Score=100.66 Aligned_cols=133 Identities=10% Similarity=0.066 Sum_probs=99.0
Q ss_pred hHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHH
Q 012159 136 AIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL-AGFMPGLVLSRVLVG 214 (470)
Q Consensus 136 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~l~G 214 (470)
..+++.++.--++...+.+.....+..+++.+++++++||+|+|+.+.++.++.++..+...+. .++.+.+++..++.|
T Consensus 251 ~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g 330 (444)
T PRK09669 251 ATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFN 330 (444)
T ss_pred hhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHH
Confidence 3344333332233444556667778888889999999999999999988876655443333222 345566777888999
Q ss_pred hhccCchhhHHHHhhhccCc-------cchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCc
Q 012159 215 IGEGVSPSAATDLIARSIPL-------EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 268 (470)
Q Consensus 215 ~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~ 268 (470)
++.+...+...++++|..+. +..|..++..+....+|..+|+.++|.+.+..|+
T Consensus 331 ~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 331 FIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999998752 2346678899999999999999999999887776
No 217
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.87 E-value=7.1e-08 Score=94.24 Aligned_cols=126 Identities=16% Similarity=0.029 Sum_probs=94.4
Q ss_pred hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHhhc
Q 012159 140 MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL--AGFMPGLVLSRVLVGIGE 217 (470)
Q Consensus 140 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~l~G~~~ 217 (470)
+.+.+|.+..+.+++.....++..++.++.+++.||++++........+.+......... ..+.+.+++..++.|++.
T Consensus 234 ~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 313 (394)
T PRK11652 234 MGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGA 313 (394)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH
Confidence 444589999999999999999999999999999999984333322222222111111111 123456677788899999
Q ss_pred cCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhccc
Q 012159 218 GVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL 266 (470)
Q Consensus 218 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 266 (470)
+...+...++..+.+| ++++.+.++.+....+|..+++.+++.+....
T Consensus 314 ~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~ 361 (394)
T PRK11652 314 GMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQTG 361 (394)
T ss_pred HHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence 9999999999999887 68899999999999999999999999886553
No 218
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.87 E-value=1.8e-06 Score=80.52 Aligned_cols=160 Identities=34% Similarity=0.490 Sum_probs=124.9
Q ss_pred HHHHHHhhhhhHHHhHHhhhhhcCCCc--hhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHh
Q 012159 122 AFVICNMDKVNLSVAIIPMSHRFGWNS--SVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL 199 (470)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~g~s~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 199 (470)
..+.............+.+..+++.+. .+.++..+.+.++..++.++.|.+.||+|||+.+..+.....++.++..+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 89 (338)
T COG0477 10 AALLLGLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALA 89 (338)
T ss_pred HHHHHHHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhC
Confidence 333444566666677777777777666 488999999999999999999999999999988888776544444444333
Q ss_pred hh-HHHHHHHHHHHHHhhccCchhhHHHHhhhccCc-cchhhHHHHHHh-hhhhHHHHHHhhHHhhhcc--cCchHHHHH
Q 012159 200 AG-FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL-EERSRAVSFVFG-GLSFGSVAGLLLAPPIIEN--LGWESVFYI 274 (470)
Q Consensus 200 ~~-~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~--~g~~~~~~~ 274 (470)
.. ..+.+++.|++.|++.+...+...+++.+++++ ++|+...+.... ...+|..++|.+++.+... .+|++.|..
T Consensus 90 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (338)
T COG0477 90 PNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLL 169 (338)
T ss_pred ccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHH
Confidence 33 468899999999999999999999999999987 678999999888 5888889999888777654 578886666
Q ss_pred HHHHHHH
Q 012159 275 FGLLGIA 281 (470)
Q Consensus 275 ~~~~~~~ 281 (470)
.......
T Consensus 170 ~~~~~~~ 176 (338)
T COG0477 170 AALLGLL 176 (338)
T ss_pred HHHHHHH
Confidence 6655533
No 219
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.87 E-value=7.7e-08 Score=94.24 Aligned_cols=152 Identities=16% Similarity=0.072 Sum_probs=105.7
Q ss_pred HHHHHhhhhhHHHhHHhhhhhc--CCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhh
Q 012159 123 FVICNMDKVNLSVAIIPMSHRF--GWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA 200 (470)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~--g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 200 (470)
.++...........++.+.++. +.+....+...+.+..+..++.++++++.||+++|+++.+..++..+..++... .
T Consensus 241 ~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~-~ 319 (410)
T TIGR00885 241 QFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIF-A 319 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-c
Confidence 3333333333444555554443 444445555677777888999999999999999999988887777776666543 3
Q ss_pred hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhccc------CchHHHHH
Q 012159 201 GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL------GWESVFYI 274 (470)
Q Consensus 201 ~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------g~~~~~~~ 274 (470)
+. .......++.|++.+..+|...++..+..+++.+....++... .+|++++|++.|++.|.. +.+..|++
T Consensus 320 ~~-~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~ 396 (410)
T TIGR00885 320 GG-HVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFIL 396 (410)
T ss_pred CC-hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH--HhccchHHHHHHHHHHHhcccccCccchHHHH
Confidence 33 2335666778888899999999999999985544334444333 399999999999999954 47777776
Q ss_pred HHHH
Q 012159 275 FGLL 278 (470)
Q Consensus 275 ~~~~ 278 (470)
..+.
T Consensus 397 ~~~~ 400 (410)
T TIGR00885 397 PLLC 400 (410)
T ss_pred HHHH
Confidence 4443
No 220
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.87 E-value=1.6e-08 Score=96.84 Aligned_cols=162 Identities=17% Similarity=0.105 Sum_probs=137.0
Q ss_pred HhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 012159 127 NMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGL 206 (470)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l 206 (470)
++....+..++-.-.++++..+...|.....-..+-++.-++.+++.+|+|+-+++.+++.+..+=++..+ ...|.|+.
T Consensus 384 G~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S-~L~n~W~v 462 (618)
T KOG3762|consen 384 GAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYS-YLQNPWMV 462 (618)
T ss_pred HHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHH-HhcCchhe
Confidence 33333344444445678888888889888888888889999999999999999999999999888877775 45666999
Q ss_pred HHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHh-hhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHHH
Q 012159 207 VLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFG-GLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG 285 (470)
Q Consensus 207 ~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~ 285 (470)
+..-+++|+..+..|.+..+++++..||+-|..+.++.+. ..++|-.+|.++||.+.+.+|-|..|.+.++.+++.++.
T Consensus 463 LPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~ 542 (618)
T KOG3762|consen 463 LPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLAL 542 (618)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999765 557999999999999999999999999999988777665
Q ss_pred HHhh
Q 012159 286 FKIL 289 (470)
Q Consensus 286 ~~~~ 289 (470)
...+
T Consensus 543 ~~~i 546 (618)
T KOG3762|consen 543 FISI 546 (618)
T ss_pred HHHh
Confidence 5444
No 221
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.82 E-value=3.2e-08 Score=97.19 Aligned_cols=176 Identities=14% Similarity=0.073 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCc--------HHH-H
Q 012159 114 KLIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGR--------KVL-Q 183 (470)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r--------~~~-~ 183 (470)
..++.++++.+........+....|. +.+-+|++..+.|++.++..+...+..+++|.++||.-+| |.+ .
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~ 337 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNT 337 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHh
Confidence 45667777888888888888888888 5567899999999999999999999999999999987552 222 2
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhc-cCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhh
Q 012159 184 TGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGE-GVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI 262 (470)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~-~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 262 (470)
++....++..+++++.........+..+..+.+. |...+....-..|.. ++.-+..+|+.+....+++.++|.+.+.+
T Consensus 338 i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~a-pq~a~~l~g~~~~~~~~~~~~~P~~vg~~ 416 (466)
T KOG2532|consen 338 IAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIA-PQHAGFVMGIINFVGALAGFIAPLLVGII 416 (466)
T ss_pred HHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHheeeE
Confidence 3444444555444444422121112222222222 333333333333434 48899999999999999999999999999
Q ss_pred hcc---cCchHHHHHHHHHHHHHHHHHHhhc
Q 012159 263 IEN---LGWESVFYIFGLLGIAWFSGFKILQ 290 (470)
Q Consensus 263 ~~~---~g~~~~~~~~~~~~~~~~~~~~~~~ 290 (470)
... ..|+++|++.+++.++..+.+.++-
T Consensus 417 ~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 417 VTDNTREEWRIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred eCCCCHHHHHHHHHHHHHHHHHhchheeEee
Confidence 842 3699999999999888776665554
No 222
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.82 E-value=2.3e-07 Score=92.66 Aligned_cols=139 Identities=16% Similarity=0.053 Sum_probs=110.2
Q ss_pred hHHHHHHHHHHHHHhhhhhHHHhhhhcC-----cHHH--HHHHHHHHHHHHHHHHh--------hhHHHHHHHHHHHHHh
Q 012159 151 AGLVQSSFFWGYALSQLPGGWLAKIFGG-----RKVL--QTGVLIWSLATALLPLL--------AGFMPGLVLSRVLVGI 215 (470)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~-----r~~~--~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~l~G~ 215 (470)
.+++.++..+...+.+++..++..|.+| +... .+|.++.+++.+..++. ..+++.+++..++.|+
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 6788888888888888876654444333 3333 66777777777665431 3467889999999999
Q ss_pred hccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHHHHHhh
Q 012159 216 GEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL 289 (470)
Q Consensus 216 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 289 (470)
|.....|...+++.+..|++.||+++|++.....+|..+++.+........+|.+.|...++..++..++.+.+
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALM 467 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999887777788888888887776665555443
No 223
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.80 E-value=1.8e-07 Score=87.12 Aligned_cols=166 Identities=19% Similarity=0.173 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHhHHhhhhh-cCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHH
Q 012159 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHR-FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (470)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (470)
+.+....++.|+..........+++.+.++ .|.+..+.....+.+..+.++|.+++.++..|+...|.+.+..++..+.
T Consensus 236 ~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill 315 (422)
T COG0738 236 KHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILL 315 (422)
T ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 444455566667667777777777776666 8899999999999999999999999999999999999998887665555
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHH
Q 012159 193 TALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF 272 (470)
Q Consensus 193 ~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~ 272 (470)
++... ..++ ...+...++.|++.+..+|...++..+..+ +.....|..-....+|+++-|.+.|++.|+.|-...+
T Consensus 316 ~~~~~-l~~g-~v~~~~l~~ig~F~simfPTIfslal~~l~--~~ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~ 391 (422)
T COG0738 316 LLAVA-LIGG-VVALYALFLIGLFNSIMFPTIFSLALKNLG--EHTSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTF 391 (422)
T ss_pred HHHHH-HhcC-hHHHHHHHHHHHHhHHHHHHHHHHHHhccC--ccccccceeeeeheecchHHHHHHHHHHHhhhhHHHH
Confidence 54443 4455 344455678899999999999999999998 4445555556667789999999999999999988887
Q ss_pred HHHHHHHHHHH
Q 012159 273 YIFGLLGIAWF 283 (470)
Q Consensus 273 ~~~~~~~~~~~ 283 (470)
.+...++.+.+
T Consensus 392 ~~~pllc~lyV 402 (422)
T COG0738 392 LIVPLLCYLYV 402 (422)
T ss_pred HHHHHHHHHHH
Confidence 76666655554
No 224
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.78 E-value=4e-08 Score=94.85 Aligned_cols=120 Identities=17% Similarity=0.123 Sum_probs=88.2
Q ss_pred hhHHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhh---HHHHH
Q 012159 131 VNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAG---FMPGL 206 (470)
Q Consensus 131 ~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~---~~~~l 206 (470)
.......|. +.+.+|.+..+.+++.++..+...++.+++|++.||+|+|+.+..+.....++..++..... +.+..
T Consensus 242 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (366)
T TIGR00886 242 LGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVF 321 (366)
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHH
Confidence 344444555 45668999999999999999999999999999999999998887776665555544432222 44444
Q ss_pred HHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhH
Q 012159 207 VLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFG 251 (470)
Q Consensus 207 ~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g 251 (470)
++..++.+++.+...+...+++.+..| +++|+++|+.+...++|
T Consensus 322 ~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 322 IVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 555555566666666667778888887 79999999998887765
No 225
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.78 E-value=3.2e-08 Score=98.55 Aligned_cols=150 Identities=14% Similarity=0.094 Sum_probs=118.1
Q ss_pred hhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhh---------hHHHHHHHHHHH
Q 012159 142 HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA---------GFMPGLVLSRVL 212 (470)
Q Consensus 142 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~---------~~~~~l~~~~~l 212 (470)
+.+|.++.++|++.....++.+++....+++.+|++.|+++.++.++.+++.+...... ++.+.++...++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 56899999999999999999999999999999999999999999888877664432111 222345556678
Q ss_pred HHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccC-----chHHHHHHHHH---HHHHHH
Q 012159 213 VGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-----WESVFYIFGLL---GIAWFS 284 (470)
Q Consensus 213 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-----~~~~~~~~~~~---~~~~~~ 284 (470)
.+++.+........++.+..|++.+|+.+++.++..++|..+++.+++.+.++.| ++..+....+. .++.+.
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l~ 440 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPLP 440 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHH
Confidence 8888888888889999999999999999999999999999999999999998877 55444433332 233333
Q ss_pred HHHhhcc
Q 012159 285 GFKILQE 291 (470)
Q Consensus 285 ~~~~~~~ 291 (470)
..+++|+
T Consensus 441 ~~~llP~ 447 (468)
T TIGR00788 441 LLHLLPR 447 (468)
T ss_pred HHHhCCC
Confidence 4445553
No 226
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.77 E-value=7.2e-11 Score=117.54 Aligned_cols=165 Identities=19% Similarity=0.091 Sum_probs=107.6
Q ss_pred hhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHH---H-hhhH-
Q 012159 128 MDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP---L-LAGF- 202 (470)
Q Consensus 128 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~---~-~~~~- 202 (470)
.+......+.+.+.+..+.+.. -.......+...++.+++..+.||+|||++++.+..+.+++.+.++ . ..++
T Consensus 267 ~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 344 (451)
T PF00083_consen 267 SGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSS 344 (451)
T ss_pred cccccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3334445556777777777766 2222334455556777778999999999999998888777666553 1 1111
Q ss_pred ---HHHHHHHHHHHHhhcc-CchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHH
Q 012159 203 ---MPGLVLSRVLVGIGEG-VSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLL 278 (470)
Q Consensus 203 ---~~~l~~~~~l~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~ 278 (470)
-...++.-.+..++.+ +..+....+.+|.+|.+.|+++.++......++..+++.+...+.+..+-...+++.+++
T Consensus 345 ~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~ 424 (451)
T PF00083_consen 345 SWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGV 424 (451)
T ss_pred cccccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHH
Confidence 0112222222222222 344666788899999999999999999999999999999988888776634455555555
Q ss_pred HHHH-HHHHHhhccCCC
Q 012159 279 GIAW-FSGFKILQEGET 294 (470)
Q Consensus 279 ~~~~-~~~~~~~~~~~~ 294 (470)
+++. .+..+++||++.
T Consensus 425 ~~i~~i~~~~~lpET~g 441 (451)
T PF00083_consen 425 CLIAIIFVYFFLPETKG 441 (451)
T ss_pred HHHHHhheeEEEeeCCC
Confidence 4444 444555666544
No 227
>PRK11462 putative transporter; Provisional
Probab=98.75 E-value=1.8e-07 Score=93.02 Aligned_cols=122 Identities=7% Similarity=-0.005 Sum_probs=85.5
Q ss_pred CchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHHHHhhccCchhhHH
Q 012159 147 NSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAG-FMPGLVLSRVLVGIGEGVSPSAAT 225 (470)
Q Consensus 147 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~ 225 (470)
++...+.+.+++.++.+++.+++++++||+|+|+++..+..+.++..++..+.+. +...+++..++.|++.+...+...
T Consensus 261 ~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~ 340 (460)
T PRK11462 261 TPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQW 340 (460)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445567778888899999999999999999999877555444443333322222 223445555667887777777777
Q ss_pred HHhhhccC-------ccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCc
Q 012159 226 DLIARSIP-------LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 268 (470)
Q Consensus 226 ~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~ 268 (470)
++++|..+ .+..|..++.......+|..+|+.++|.+.+..|+
T Consensus 341 ~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 341 VMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 78887765 33345666777788899999999999988876555
No 228
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.72 E-value=1.6e-07 Score=90.69 Aligned_cols=153 Identities=16% Similarity=0.144 Sum_probs=120.7
Q ss_pred HHHHHHHHHHHHhhhhhHHHhHHhhh-hhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHH
Q 012159 116 IGTTSLAFVICNMDKVNLSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATA 194 (470)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 194 (470)
+...++..++......+.+....++. ..+|.+..+..+.......+.+++.+++.++.+|+|+|+++.++.++..++.+
T Consensus 238 ~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~ 317 (467)
T COG2211 238 LLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYL 317 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 33444466666666666666666643 34577777777888888888888899999999999999999999999999888
Q ss_pred HHHHhh-hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCc-------cchhhHHHHHHhhhhhHHHHHHhhHHhhhccc
Q 012159 195 LLPLLA-GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL-------EERSRAVSFVFGGLSFGSVAGLLLAPPIIENL 266 (470)
Q Consensus 195 ~~~~~~-~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 266 (470)
++.+.. ++.+.+++..++.+++.+...+...++++|..+- +.-|...+.+..+.-+|.+++..+.|++.+..
T Consensus 318 ~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~ 397 (467)
T COG2211 318 LLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAI 397 (467)
T ss_pred HHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 775544 4567788888999999999999999999987632 33477888888888899999999988888766
Q ss_pred Cc
Q 012159 267 GW 268 (470)
Q Consensus 267 g~ 268 (470)
|+
T Consensus 398 Gy 399 (467)
T COG2211 398 GY 399 (467)
T ss_pred CC
Confidence 54
No 229
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.71 E-value=1.8e-08 Score=94.76 Aligned_cols=183 Identities=13% Similarity=0.053 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHH--------HHHHH-HHHHHHhhhhhHHHhhhhcCcHHHHH
Q 012159 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGL--------VQSSF-FWGYALSQLPGGWLAKIFGGRKVLQT 184 (470)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~--------~~~~~-~~~~~~~~~~~g~l~dr~g~r~~~~~ 184 (470)
+.+...+...|+.-+..+..+.....+.+..|+.+.+... ...+. ..+++.+-.+...++|++|||+..+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 5556666667776666677777777788877776554433 11122 22223356677788999999999999
Q ss_pred HHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHh-hccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHH
Q 012159 185 GVLIWSLATALLPLLAG---FMPGLVLSRVLVGI-GEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAP 260 (470)
Q Consensus 185 ~~~~~~~~~~~~~~~~~---~~~~l~~~~~l~G~-~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 260 (470)
+.+++++..+.++...+ +...++++..+..+ +.-+.......+.+|.+|.+.|+...|+....+-+|+++|.....
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~ 463 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFL 463 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhh
Confidence 99999988877753322 11222333333322 222333445667789999999999999999999999999999999
Q ss_pred hhhc-----ccCchHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 012159 261 PIIE-----NLGWESVFYIFGLLGIAWFSGFKILQEGETSN 296 (470)
Q Consensus 261 ~l~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (470)
++.+ ..|.++++++.+.+.++..+..++++|+....
T Consensus 464 ~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~~~ 504 (538)
T KOG0252|consen 464 YLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKGKS 504 (538)
T ss_pred HhhhccCCccccchHHHHHHHHHHHHhHheeEEeecccccC
Confidence 9998 77899999999999999999888888665543
No 230
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.69 E-value=6.5e-07 Score=84.15 Aligned_cols=172 Identities=19% Similarity=0.147 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhh-hhcCcHHHHHHHHHHHH
Q 012159 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAK-IFGGRKVLQTGVLIWSL 191 (470)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d-r~g~r~~~~~~~~~~~~ 191 (470)
++.+..+++..+...+...+. =|+=.+-||++..+...+......+..++....|++.. |.+++++..+++.+..+
T Consensus 211 ~~f~~fl~l~t~a~~~QD~iL---EPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~ 287 (403)
T PF03209_consen 211 RRFFVFLFLGTLAFFMQDVIL---EPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGAL 287 (403)
T ss_pred hHHHHHHHHHHHHHHhhHHHc---CCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHH
Confidence 455445544444333322221 23345668999999999999999999999999999887 67888887788777666
Q ss_pred HHHHHHH--hhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcc----
Q 012159 192 ATALLPL--LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN---- 265 (470)
Q Consensus 192 ~~~~~~~--~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~---- 265 (470)
+..+..+ ...+.+.+...-++.|++.|.+.....+...+...+++.|..+|.+.....++..+|..++|.+.|.
T Consensus 288 ~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~ 367 (403)
T PF03209_consen 288 AFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRAL 367 (403)
T ss_pred HHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6654432 2344578889999999999999999999999999999999999999999999999999999988653
Q ss_pred ------cCchHHHHHHHHHHHHHHHHHH
Q 012159 266 ------LGWESVFYIFGLLGIAWFSGFK 287 (470)
Q Consensus 266 ------~g~~~~~~~~~~~~~~~~~~~~ 287 (470)
.+|..+|.+.+++.++.+.+..
T Consensus 368 ~~~~~~~aY~~VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 368 FGNSPALAYGVVFALEAVLLLAALVLLG 395 (403)
T ss_pred ccCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 2356666666666555544443
No 231
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.65 E-value=7.9e-08 Score=88.91 Aligned_cols=167 Identities=16% Similarity=0.177 Sum_probs=123.7
Q ss_pred HHHHhhhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHH--HHHHHHHHHHHHHHhh
Q 012159 124 VICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQT--GVLIWSLATALLPLLA 200 (470)
Q Consensus 124 ~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~--~~~~~~~~~~~~~~~~ 200 (470)
..........-+.++. +.+.+..+..+.|+..--..+.+.++..+.|.+.||++..+++.. +++..++..... ...
T Consensus 280 ~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~i-P~~ 358 (464)
T KOG3764|consen 280 TFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPI-PFA 358 (464)
T ss_pred hhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchh-Hhh
Confidence 3334444555556666 667788667799999999999999999999999999995444433 333333333333 245
Q ss_pred hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCcc------chhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHH
Q 012159 201 GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE------ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYI 274 (470)
Q Consensus 201 ~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~ 274 (470)
+++..+++-++..|++.+..............+.+ ..|...++...++.+|.++||.++|.+.+..|++|...+
T Consensus 359 ~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~i 438 (464)
T KOG3764|consen 359 TSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTI 438 (464)
T ss_pred hhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHH
Confidence 66678888888888887777666655555555332 457899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcc
Q 012159 275 FGLLGIAWFSGFKILQE 291 (470)
Q Consensus 275 ~~~~~~~~~~~~~~~~~ 291 (470)
.++..++...++..++.
T Consensus 439 ig~~n~iyapvl~ll~~ 455 (464)
T KOG3764|consen 439 IGILNLIYAPVLLLLRI 455 (464)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99988777666555543
No 232
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.63 E-value=7.6e-07 Score=87.46 Aligned_cols=158 Identities=11% Similarity=-0.011 Sum_probs=101.7
Q ss_pred HHHHHhhhhhHHHhHHhh-hhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHH---
Q 012159 123 FVICNMDKVNLSVAIIPM-SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL--- 198 (470)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~--- 198 (470)
.++.......+....|.+ .+.+|.+..+.++.......+..++..+.+++.++..+++.+.....+..++.+++..
T Consensus 227 ~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~ 306 (413)
T PRK15403 227 LSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNL 306 (413)
T ss_pred HHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 333344444455566764 4556999999999988888888888888888775554444432222222222222211
Q ss_pred -hhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHH
Q 012159 199 -LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGL 277 (470)
Q Consensus 199 -~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~ 277 (470)
..++++..++..++.++|.+...|......-. -....+|++.++.+.....+..+++.+++++.++ +-++.|...++
T Consensus 307 ~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~-~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~ 384 (413)
T PRK15403 307 LWPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLF-SNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAV 384 (413)
T ss_pred HccccHHHHHHHHHHHHHHHHHHhHHHHHHHhc-cCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHH
Confidence 22333345677788888888877777643321 1223579999999999989999999999988776 66677776666
Q ss_pred HHHHH
Q 012159 278 LGIAW 282 (470)
Q Consensus 278 ~~~~~ 282 (470)
+..+.
T Consensus 385 ~~~~~ 389 (413)
T PRK15403 385 VAGVI 389 (413)
T ss_pred HHHHH
Confidence 54443
No 233
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.58 E-value=0.00015 Score=71.66 Aligned_cols=285 Identities=10% Similarity=0.000 Sum_probs=162.8
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHH-HHHHhhhhhHHHhhhhcCcHHHHHHHHH
Q 012159 111 QRYKLIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFW-GYALSQLPGGWLAKIFGGRKVLQTGVLI 188 (470)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 188 (470)
..++.++.+.+.+++..+..+..-..=-. +... .+++.+..+=....+ ...+...+..++++++++.+++-+....
T Consensus 21 ~E~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt~--~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~ 98 (491)
T PF03219_consen 21 SELKKFLPLALMFFFILFNYTILRDLKDTLVVTA--QGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIP 98 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEec--CChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 34555666666666665555443332111 1111 255556665554444 3445677899999999999988877666
Q ss_pred HHHHHHHHHHhh--------hH----------------------HHHHHHHHHHHHhhccCchh-hHHHHhhhccCccch
Q 012159 189 WSLATALLPLLA--------GF----------------------MPGLVLSRVLVGIGEGVSPS-AATDLIARSIPLEER 237 (470)
Q Consensus 189 ~~~~~~~~~~~~--------~~----------------------~~~l~~~~~l~G~~~~~~~~-~~~~~i~~~~~~~~r 237 (470)
+.....+++++- ++ .|...+..+..-+-.....+ ....+..|.++.+|-
T Consensus 99 F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eA 178 (491)
T PF03219_consen 99 FLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEA 178 (491)
T ss_pred HHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 555555544321 00 12222333333333333333 468889999999999
Q ss_pred hhHHHHHHhhhhhHHHHHHhhHHhhhc---------ccCchHHHHHHH----HHHHHHHHHHHhhccCCCCCCCCCCCcc
Q 012159 238 SRAVSFVFGGLSFGSVAGLLLAPPIIE---------NLGWESVFYIFG----LLGIAWFSGFKILQEGETSNGATLAPRS 304 (470)
Q Consensus 238 ~~~~~~~~~~~~~g~~~g~~~~~~l~~---------~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (470)
.|..+++..+.++|.++++.+..++.+ ...|...+.... +.+++.......+.+....++.......
T Consensus 179 KRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~~~~~~ 258 (491)
T PF03219_consen 179 KRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNVLTDPRFYPSAK 258 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccchhhh
Confidence 999999999999999999998888877 123543332222 1122222222223221111111000000
Q ss_pred chhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchh---hHHHHHHH
Q 012159 305 NYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTE---AAWVSILP 381 (470)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~---~~~~~~~~ 381 (470)
+ ......+..-..+++.++++|.+..+++...+++.....+....-..+++.+.-+.+. .|-.....
T Consensus 259 ~----------~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~t 328 (491)
T PF03219_consen 259 K----------KKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWT 328 (491)
T ss_pred c----------ccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHH
Confidence 0 0000000011124577889999999999888888888888777777777654332222 23445556
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcch
Q 012159 382 PLASVLVTSIAAQFADNLIATGVETT 407 (470)
Q Consensus 382 ~~~~~~~~~~~g~l~dr~~~~~~~~~ 407 (470)
++..++..++++.+.+|+|.+....+
T Consensus 329 Givtii~~~l~~~iir~~GW~~~Ali 354 (491)
T PF03219_consen 329 GIVTIIMMFLSSNIIRRFGWRTAALI 354 (491)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 66777777888999999998864443
No 234
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.57 E-value=2.6e-06 Score=85.70 Aligned_cols=136 Identities=16% Similarity=0.057 Sum_probs=99.3
Q ss_pred hHHHHHHHHHHHHHhhhhh----HHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhH--------HHHHHHHHHHHHhhcc
Q 012159 151 AGLVQSSFFWGYALSQLPG----GWLAKIFGGRKVLQTGVLIWSLATALLPLLAGF--------MPGLVLSRVLVGIGEG 218 (470)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~----g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~--------~~~l~~~~~l~G~~~~ 218 (470)
.+++.++..+...+..++. +++.+|++..+.+.++.++.+++.++++..... .+.++...++.|+|+.
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 4566666666666666655 555666666688888999988888776543321 3578889999999999
Q ss_pred CchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhc----------ccCchHHHHHHHHHHHHHHHHH
Q 012159 219 VSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE----------NLGWESVFYIFGLLGIAWFSGF 286 (470)
Q Consensus 219 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~----------~~g~~~~~~~~~~~~~~~~~~~ 286 (470)
...|...+++.+..|++.||+++|++.....+|..++..+.+.... ..++.+.|...++++++..+++
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~ 475 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLM 475 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999888777777777666643210 1136678887777665444333
No 235
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.55 E-value=2.2e-06 Score=84.37 Aligned_cols=179 Identities=10% Similarity=-0.008 Sum_probs=127.7
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHhHHh-hhh-hcCCCch------h----hHHHHHHHHHHHHHhhhhhHHHhhhhcC-cH
Q 012159 114 KLIGTTSLAFVICNMDKVNLSVAIIP-MSH-RFGWNSS------V----AGLVQSSFFWGYALSQLPGGWLAKIFGG-RK 180 (470)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~g~s~~------~----~~~~~~~~~~~~~~~~~~~g~l~dr~g~-r~ 180 (470)
+.+..+++.+++..+....+..+... +.+ -++.++. + -.+....+.+...+.+++.-++.+|+|+ |+
T Consensus 258 ~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~ 337 (477)
T TIGR01301 258 RPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKR 337 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 45666777788888777766666554 332 2333221 1 2244455666666777788889999985 67
Q ss_pred HHHHHHHHHHHHHHHHHHhhh---H-----------------HHHHHHHHHHHHhhccCchhhHHHHhhhccCc--cchh
Q 012159 181 VLQTGVLIWSLATALLPLLAG---F-----------------MPGLVLSRVLVGIGEGVSPSAATDLIARSIPL--EERS 238 (470)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~---~-----------------~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~--~~r~ 238 (470)
+..++.++.++++....+... + .+..++...+.|+..+.....-++++++..++ ++.|
T Consensus 338 ~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G 417 (477)
T TIGR01301 338 LWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQG 417 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCc
Confidence 778887777777766543332 1 25677788889999999999999999999984 4569
Q ss_pred hHHHHHHhhhhhHHHHHHhhHHhhhcccC--chHHHHHHHHHHHHHHHHHHhhccC
Q 012159 239 RAVSFVFGGLSFGSVAGLLLAPPIIENLG--WESVFYIFGLLGIAWFSGFKILQEG 292 (470)
Q Consensus 239 ~~~~~~~~~~~~g~~~g~~~~~~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (470)
..+|+.+.+..+..++..+..|.+.+.+| -.+++.+.++..++..+..+++.++
T Consensus 418 ~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~ 473 (477)
T TIGR01301 418 LSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPR 473 (477)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999988888666555 5667777787777766655554443
No 236
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.50 E-value=3.3e-05 Score=74.87 Aligned_cols=235 Identities=17% Similarity=0.122 Sum_probs=144.5
Q ss_pred hHHH-HHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhh
Q 012159 151 AGLV-QSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIA 229 (470)
Q Consensus 151 ~~~~-~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~ 229 (470)
.|.. .++......+..++.+.+.|+.|.|+.+.++...+.+..+.+ +..+ -+.++....+.|+|.+..+.....+++
T Consensus 51 aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gf-l~~N-~y~~yfssallG~Gaallw~GqG~ylt 128 (461)
T KOG3098|consen 51 AGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGF-LFPN-SYYLYFSSALLGFGAALLWTGQGGYLT 128 (461)
T ss_pred ccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHH-Hhcc-hHHHHHHHHHhhhhHHheecccceehh
Confidence 3443 677788888999999999999999999999999887776554 3444 478899999999999999999999999
Q ss_pred hccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhccc--------Cch-H----------HHHHHHHHHHHH---HHHHH
Q 012159 230 RSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL--------GWE-S----------VFYIFGLLGIAW---FSGFK 287 (470)
Q Consensus 230 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~--------g~~-~----------~~~~~~~~~~~~---~~~~~ 287 (470)
+...++.+.+..++.......+.++|..+...+..+. +.+ + ...+.+++..+. .+...
T Consensus 129 ~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~ 208 (461)
T KOG3098|consen 129 SNSTRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFD 208 (461)
T ss_pred hcCChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhhee
Confidence 9999999999999988888888888876654443221 111 1 111111111111 11111
Q ss_pred hhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 012159 288 ILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE- 366 (470)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~- 366 (470)
+.+.+......+.. +.. ..+. .....+.+++++...+....+..+..........|..+.-.
T Consensus 209 ~~p~~~~~~~~~~~-~~~-------~~~~---------l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~ 271 (461)
T KOG3098|consen 209 FLPSKDVVNCKSSS-ETS-------FSEL---------LKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTR 271 (461)
T ss_pred ecCccchhhhhhhc-ccc-------HHHH---------HHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhh
Confidence 11111100000000 000 0000 01124567788887777666666555554555555554432
Q ss_pred -hCCC-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 012159 367 -LSLN-LTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (470)
Q Consensus 367 -~g~s-~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~ 404 (470)
.+.+ ....++.....+++.+++....+.+.+|.++...
T Consensus 272 ~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~ 311 (461)
T KOG3098|consen 272 KLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGR 311 (461)
T ss_pred hccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhccc
Confidence 1222 2334555666677777777888888877665543
No 237
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.46 E-value=2.6e-05 Score=71.99 Aligned_cols=262 Identities=13% Similarity=0.086 Sum_probs=158.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhh-----hhcCcHHHHH-HH
Q 012159 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAK-----IFGGRKVLQT-GV 186 (470)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d-----r~g~r~~~~~-~~ 186 (470)
++.+..+.+.+.++++-..... .+|.+.+.-|.|.++.+....++. .+ -.-++|.++.| |+||||..++ +.
T Consensus 30 ~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~-P~-sLKllWaPiVDs~y~k~~GrrksWvvp~q 106 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAYW-PF-SLKLLWAPIVDSVYSKRFGRRKSWVVPCQ 106 (510)
T ss_pred hhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhhh-HH-HHHHHHHhhhHHHHHHhhccccceeeehH
Confidence 4555666677888888777777 899988877888877665433222 22 34578999999 9999886554 33
Q ss_pred HHHHHHHHHHHHhh----------hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHH
Q 012159 187 LIWSLATALLPLLA----------GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGL 256 (470)
Q Consensus 187 ~~~~~~~~~~~~~~----------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 256 (470)
.+.+..+.+++... ++...+....++.-+..+....+.-.+.-.+..+++.|-+......+...|.+++.
T Consensus 107 ~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~ 186 (510)
T KOG3574|consen 107 YLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGN 186 (510)
T ss_pred HHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhc
Confidence 33333333333222 12223334556667777788888888888888889999888888888888877776
Q ss_pred hhHHhhhc-------ccCc---------hHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhh
Q 012159 257 LLAPPIIE-------NLGW---------ESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEM 320 (470)
Q Consensus 257 ~~~~~l~~-------~~g~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (470)
.+.-.+.. ..+| ...++..+.+.++.-....+..++++.. ..++.... ..+.
T Consensus 187 ~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~-~~~e~~~~---i~~~-------- 254 (510)
T KOG3574|consen 187 VVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDES-VDEELELG---IHES-------- 254 (510)
T ss_pred ceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchh-hhhhhhcC---HHHH--------
Confidence 55433332 0112 2334444555444444444443333222 11000000 0000
Q ss_pred hccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 012159 321 GESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQF 395 (470)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l 395 (470)
..-++++++-|.+..++......-.++.+.....+.-+.| .|++..+.+++..+..-..++.....|++
T Consensus 255 -----yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ 323 (510)
T KOG3574|consen 255 -----YKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELALIAVPLVPLQIALPLYIGKW 323 (510)
T ss_pred -----HHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHheeeeeehhhHHHhhhhhheee
Confidence 1123567777888888888888888888888888888886 59999888766544444444444444433
No 238
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.46 E-value=3.5e-06 Score=83.34 Aligned_cols=121 Identities=14% Similarity=0.227 Sum_probs=97.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCcch------
Q 012159 335 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL-IATGVETT------ 407 (470)
Q Consensus 335 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~~~~------ 407 (470)
.+.++.++...+...+.++++..++|.|+++.+|+++.+++.+...+.+...++.+++|+++||+ |+|+....
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~ 87 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMA 87 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHH
Confidence 35677777788888889999999999999988999999999999999999999999999999999 98876553
Q ss_pred ----------------------------------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCc
Q 012159 408 ----------------------------------------------------MGITNTVGAVPGIVGVALTGYLLDSTHS 435 (470)
Q Consensus 408 ----------------------------------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~ 435 (470)
.++.+..+.+|+.++|.+.|++.+..+
T Consensus 88 lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~G- 166 (493)
T PRK15462 88 IGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYS- 166 (493)
T ss_pred HHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhC-
Confidence 677788888999999999999987654
Q ss_pred eehhhHHHHHHHHHHHHHHHhh
Q 012159 436 WSMSLFAPSIFFYLTGTIVWLA 457 (470)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~ 457 (470)
|...|.+.++. .+.+.+.+..
T Consensus 167 w~~~F~iaaig-m~l~li~~~~ 187 (493)
T PRK15462 167 WAMGFGLAAVG-MIAGLVIFLC 187 (493)
T ss_pred hHHHHHHHHHH-HHHHHHHHHH
Confidence 55565554443 3344444443
No 239
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.45 E-value=1.2e-05 Score=66.22 Aligned_cols=109 Identities=16% Similarity=0.131 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhcc
Q 012159 153 LVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSI 232 (470)
Q Consensus 153 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~ 232 (470)
.-.++......+..++.+.+.+++|.|+.++++.+.+.+-.... ..++.+.++..-++.|++.+..|++...++.+..
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~--~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s 118 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF--FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYS 118 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcC
Confidence 34556666677888889999999999999999999887554433 4455588999999999999999999999999999
Q ss_pred CccchhhHHHHHHhhhhhHHHHHHhhHHhhh
Q 012159 233 PLEERSRAVSFVFGGLSFGSVAGLLLAPPII 263 (470)
Q Consensus 233 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 263 (470)
.++++++..+++......+.++|.++.-.+.
T Consensus 119 ~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 119 TEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred CHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998888888888877765543
No 240
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.44 E-value=1.2e-06 Score=76.78 Aligned_cols=252 Identities=15% Similarity=0.058 Sum_probs=146.2
Q ss_pred hhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 012159 128 MDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLV 207 (470)
Q Consensus 128 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 207 (470)
.+-...+++.-.+.+.+|+...++|.+........++...+.|-++||-|||+..+.-++.+.++++- -.++.+-.++
T Consensus 51 AgDWLQgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiT--KhSpqYkVLm 128 (454)
T KOG4332|consen 51 AGDWLQGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCIT--KHSPQYKVLM 128 (454)
T ss_pred hhhhhcCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHh--hcCCceEEEe
Confidence 33444556666677889999999999988888888899999999999999999876665555444422 2345567899
Q ss_pred HHHHHHHhhccCchhhHHHHhhhccCccchhhHHHH--------HHhhhhhHHHHHHhhHHhhhccc--CchHHHHHHHH
Q 012159 208 LSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSF--------VFGGLSFGSVAGLLLAPPIIENL--GWESVFYIFGL 277 (470)
Q Consensus 208 ~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~--------~~~~~~~g~~~g~~~~~~l~~~~--g~~~~~~~~~~ 277 (470)
++|++.|+..+..+.+..++...--. ++|+.-.-+ ...+..+-.+++.+.+..+.+.+ |.-.+|-..+.
T Consensus 129 VGR~LGGiaTsLLFSaFEsWliaEHn-ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAac 207 (454)
T KOG4332|consen 129 VGRVLGGIATSLLFSAFESWLIAEHN-EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAAC 207 (454)
T ss_pred ehhhhhhHHHHHHHHHHHHHHHHHhh-hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHH
Confidence 99999999999888888777643322 233322222 12334455566666666666654 45556665555
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Q 012159 278 LGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 357 (470)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 357 (470)
+..+...+.+.-..+.-.++ .+.++..... +...+.+..++++.++.....++-...+.+.+
T Consensus 208 fLaigmAvil~~W~ENygdp---s~~kdlltqf---------------~gaa~aiaSD~ki~LLG~iqsLFE~smytFVF 269 (454)
T KOG4332|consen 208 FLAIGMAVILSSWSENYGDP---SENKDLLTQF---------------KGAARAIASDEKIALLGAIQSLFEGSMYTFVF 269 (454)
T ss_pred HHHHHHHHHHhhhhhccCCh---hhhHHHHHHh---------------hHhHHHHhcchHHHHHHHHHHHHhhhhheeee
Confidence 44333222221111111000 0000000000 01124556677776665555555444444433
Q ss_pred HHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 012159 358 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (470)
Q Consensus 358 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~ 402 (470)
....-+.. +-...--|.+++.+.+++++|+-+..++..|-..+
T Consensus 270 LWTPaLsp--n~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ 312 (454)
T KOG4332|consen 270 LWTPALSP--NDEEIPHGFIFATFMLASMLGSSLASRLLSRSSPK 312 (454)
T ss_pred eecccCCC--CcccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcc
Confidence 32222220 11122347788888888888888877776654443
No 241
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.43 E-value=8.7e-06 Score=82.38 Aligned_cols=180 Identities=19% Similarity=0.108 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHH
Q 012159 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (470)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (470)
++.+..+.+..+....+......+.+.+.+..|.+... .+...+..+...++..++..+.||+|||+.++.+...+.++
T Consensus 294 ~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~ 372 (513)
T KOG0254|consen 294 KRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSIC 372 (513)
T ss_pred HHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHH
Confidence 34444555555555555666666778888888877554 55666677777788888899999999999999999999888
Q ss_pred HHHHHHhhhH------------HHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHH
Q 012159 193 TALLPLLAGF------------MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAP 260 (470)
Q Consensus 193 ~~~~~~~~~~------------~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 260 (470)
.++++..... +..+....+.......+..+....+.+|.+|.+-|+++.++......+...+-.....
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~ 452 (513)
T KOG0254|consen 373 LVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFP 452 (513)
T ss_pred HHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 8776533211 1122223333333334455666788899999999999999988777766655554444
Q ss_pred hhhcccCchHHHHHHHHHHHHHHH--HHHhhccCC
Q 012159 261 PIIENLGWESVFYIFGLLGIAWFS--GFKILQEGE 293 (470)
Q Consensus 261 ~l~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~ 293 (470)
.+.+..++...|...+..+.+... ..+++||++
T Consensus 453 ~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETk 487 (513)
T KOG0254|consen 453 FITEALGIGGTFGYFGGICLLSLIIFVFFFVPETK 487 (513)
T ss_pred HHHHhccccchHHHHHHHHHHHHHHHheEEcccCC
Confidence 444444445566666665544444 445555544
No 242
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.43 E-value=7.6e-06 Score=81.93 Aligned_cols=138 Identities=14% Similarity=0.040 Sum_probs=102.4
Q ss_pred hHHHHHHHHHHHHHhhhhhHHHhhhhcCcHH-------HHHHHHHHHHHHHHHH-----Hh----hhHHHHHHHHHHHHH
Q 012159 151 AGLVQSSFFWGYALSQLPGGWLAKIFGGRKV-------LQTGVLIWSLATALLP-----LL----AGFMPGLVLSRVLVG 214 (470)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-------~~~~~~~~~~~~~~~~-----~~----~~~~~~l~~~~~l~G 214 (470)
.+++.++..+...+..++.+++.||+++|+. +.++.++.+++.+.++ .. ..+.+.++...++.|
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 3455566667777888899999999999873 6677777666654321 11 123566778889999
Q ss_pred hhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhc----------ccCchHHHHHHHHHHHHHHH
Q 012159 215 IGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE----------NLGWESVFYIFGLLGIAWFS 284 (470)
Q Consensus 215 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~----------~~g~~~~~~~~~~~~~~~~~ 284 (470)
+|.+...+...+++.+..|++.++.++|++.....+|..+|..++..... .-.+.+.|...++..++..+
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v 470 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAV 470 (489)
T ss_pred HHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999888865521 11245667777766655544
Q ss_pred HHHh
Q 012159 285 GFKI 288 (470)
Q Consensus 285 ~~~~ 288 (470)
+++.
T Consensus 471 ~~~~ 474 (489)
T PRK10207 471 VMAL 474 (489)
T ss_pred HHHH
Confidence 4433
No 243
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.40 E-value=2.4e-06 Score=61.27 Aligned_cols=71 Identities=21% Similarity=0.159 Sum_probs=61.2
Q ss_pred HHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHH
Q 012159 119 TSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIW 189 (470)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 189 (470)
+-..+++.+.......+++|...++.|+++.++|.+.++..+...++++++|.++||+++++.++....++
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 34456666677778888899988999999999999999999999999999999999999999888765543
No 244
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.35 E-value=7.1e-06 Score=79.14 Aligned_cols=76 Identities=14% Similarity=0.074 Sum_probs=61.0
Q ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch
Q 012159 331 AIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT 407 (470)
Q Consensus 331 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~ 407 (470)
.++.++....+++...+..++...+.+++=-++++ ++-.+...|.+......+.++.-++.+++.+|+|+.+++..
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~l 441 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYL 441 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeee
Confidence 45667777777777777778777788888777775 46677777888888888999999999999999998877665
No 245
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.33 E-value=2.4e-06 Score=84.43 Aligned_cols=164 Identities=17% Similarity=0.228 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHHHhhhhhHHHhHHhhhhh-cCCCchhhHHHHHHHHHHHHHhhhhhHHHhhh----hcCcHHHHHHHHHH
Q 012159 115 LIGTTSLAFVICNMDKVNLSVAIIPMSHR-FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI----FGGRKVLQTGVLIW 189 (470)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~g~r~~~~~~~~~~ 189 (470)
.++..+++.++.....+.+...+|.+.++ .|++..+.+.+.+.+.++.+++.+++|.++|| ..+|........++
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~ 353 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLY 353 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 34566777888888888899999997777 56999999999999999999999999999999 66777666666555
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccch-hhHHHHHHhhhhhHHHH-HHhhHHhhhcccC
Q 012159 190 SLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEER-SRAVSFVFGGLSFGSVA-GLLLAPPIIENLG 267 (470)
Q Consensus 190 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r-~~~~~~~~~~~~~g~~~-g~~~~~~l~~~~g 267 (470)
.+...+.....+.........+....+.....+......++...+..| -...+....+.+.++++ ++...+.....++
T Consensus 354 ~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~ 433 (495)
T KOG2533|consen 354 AIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYG 433 (495)
T ss_pred HHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcchh
Confidence 544422222233223333333444444555667777777777754443 33334444444444444 4444444555678
Q ss_pred chHHHHHHHHH
Q 012159 268 WESVFYIFGLL 278 (470)
Q Consensus 268 ~~~~~~~~~~~ 278 (470)
|.+.|......
T Consensus 434 ~~~~f~~~~~~ 444 (495)
T KOG2533|consen 434 WGAVFYMLVAA 444 (495)
T ss_pred hhhHHHHHHHH
Confidence 88888554443
No 246
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.32 E-value=0.00027 Score=67.48 Aligned_cols=133 Identities=15% Similarity=0.087 Sum_probs=97.7
Q ss_pred hHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhh
Q 012159 151 AGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIAR 230 (470)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~ 230 (470)
.+.+.-+-.+...+..+.+.++.+|+..+.-+.+..+++.+++++.+ .+++.+.-+++-++.+++.|........+..
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va-~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~- 138 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVA-FSPSVWVRLLGVVLASLSSGLGEVTFLSLTH- 138 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhhee-eccchhHHHHHHHHHhhhhhhhHHHHHHHHH-
Confidence 34466666777888888899999998866656666677777777664 5566788888889999999888888777644
Q ss_pred ccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccC--chHHHHHHHHHHHHHHHHHHhhc
Q 012159 231 SIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG--WESVFYIFGLLGIAWFSGFKILQ 290 (470)
Q Consensus 231 ~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~ 290 (470)
.+++ ...+-+.++.+.++++|+..--.+.. .| .|..+++...+.++..+..+++.
T Consensus 139 ~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L 195 (402)
T PF02487_consen 139 FYGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLL 195 (402)
T ss_pred hcCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 5553 35788899999999999988777766 55 47778877777665555544443
No 247
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.31 E-value=4.5e-06 Score=60.30 Aligned_cols=76 Identities=24% Similarity=0.330 Sum_probs=67.7
Q ss_pred HHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhh
Q 012159 126 CNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAG 201 (470)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 201 (470)
.++.+..+++.+|.+.++.++|..+.|++.+...+|+.+|.+...++.++..+++.+..+.+...+..+.+++..+
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~ 79 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHS 79 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4577889999999999999999999999999999999999999999999988889999998888888877754433
No 248
>PTZ00207 hypothetical protein; Provisional
Probab=98.30 E-value=6.1e-06 Score=83.20 Aligned_cols=173 Identities=10% Similarity=0.001 Sum_probs=122.9
Q ss_pred HHHHHHHHHHHHHhhhhhHHHhHHhhhhhc-CCCc-hhhHH-HHHHHHHHHHHhhhhhHHHhhh---------hcCcHHH
Q 012159 115 LIGTTSLAFVICNMDKVNLSVAIIPMSHRF-GWNS-SVAGL-VQSSFFWGYALSQLPGGWLAKI---------FGGRKVL 182 (470)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~-~~~~~-~~~~~~~~~~~~~~~~g~l~dr---------~g~r~~~ 182 (470)
-++++++.+++.......+..-+.++.+.+ |.+. .+... +.++..++..+|.+..|.+... +.|--.+
T Consensus 354 d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l 433 (591)
T PTZ00207 354 RLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIAL 433 (591)
T ss_pred hHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHH
Confidence 345556666665555444555566788888 6623 32233 7889999999999999988721 2222233
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHH-HhhHHh
Q 012159 183 QTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAG-LLLAPP 261 (470)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g-~~~~~~ 261 (470)
.+..+ +.++.+++++..+. ..+++..++.|++.|..++.....++|+|. |+-|+-..+......+|..+- ..+.|.
T Consensus 434 ~~~~~-~~~~~lll~~~~p~-~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~ 510 (591)
T PTZ00207 434 FIPSV-CIITMLTLFLTLPK-AALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGE 510 (591)
T ss_pred HHHHH-HHHHHHHHHHHCCc-cHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHH
Confidence 33334 55555555443332 578999999999999999999999999999 999999999888888888776 667888
Q ss_pred hhccc----------C---chHHHHHHHHHHHHHHHHHHhhc
Q 012159 262 IIENL----------G---WESVFYIFGLLGIAWFSGFKILQ 290 (470)
Q Consensus 262 l~~~~----------g---~~~~~~~~~~~~~~~~~~~~~~~ 290 (470)
++|+. | ++.+|++.++++++..+....+.
T Consensus 511 ~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~ 552 (591)
T PTZ00207 511 WYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVH 552 (591)
T ss_pred HHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhhee
Confidence 87532 2 68899999998887776655554
No 249
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.25 E-value=1.2e-05 Score=74.26 Aligned_cols=132 Identities=21% Similarity=0.142 Sum_probs=105.9
Q ss_pred HHHhHHhh-hhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhc--CcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 012159 133 LSVAIIPM-SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFG--GRKVLQTGVLIWSLATALLPLLAGFMPGLVLS 209 (470)
Q Consensus 133 ~~~~~~~~-~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g--~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 209 (470)
+....+.+ .+.+|+++.|.|-+.+...+...+.+....+..||.. -+..+..+..++.-..++.. .......+.+.
T Consensus 280 ~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls-~~~~~~~l~~~ 358 (451)
T KOG2615|consen 280 LENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLS-LARTPVVLYLG 358 (451)
T ss_pred HHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHh-ccccchhhhHH
Confidence 33333443 4678999999999999999999999999999999887 56666666555444444443 33444677888
Q ss_pred HHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcc
Q 012159 210 RVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN 265 (470)
Q Consensus 210 ~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 265 (470)
..+..+..+...+....++....|.++||.++|+......++-++||+++|.+..+
T Consensus 359 s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 359 STLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred HHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence 88888988888899999999999999999999999999999999999999987653
No 250
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.25 E-value=0.0054 Score=59.31 Aligned_cols=280 Identities=11% Similarity=-0.024 Sum_probs=160.0
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcC---CCchhhHHHHHHHHH-HHHHhhhhhHHHhhhhcCcHHHHHHH
Q 012159 111 QRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFG---WNSSVAGLVQSSFFW-GYALSQLPGGWLAKIFGGRKVLQTGV 186 (470)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g~r~~~~~~~ 186 (470)
..++.++.+.+.+++..+..+..- .+.+.+. .++..+.++-+...+ +..+..++.+++.+++.+.+++-+..
T Consensus 24 ~E~~kflpl~Ll~f~I~~ny~~lR----~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~ 99 (509)
T COG3202 24 YELKKFLPLALLFFCILFNYNLLR----SLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIIL 99 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----HhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHH
Confidence 345556666666666555444333 3444443 456677777777777 66788899999999999999988877
Q ss_pred HHHHHHHHHHHHhhh--------H-----------------------HHHHHHHHHHHHhhccCchh-hHHHHhhhccCc
Q 012159 187 LIWSLATALLPLLAG--------F-----------------------MPGLVLSRVLVGIGEGVSPS-AATDLIARSIPL 234 (470)
Q Consensus 187 ~~~~~~~~~~~~~~~--------~-----------------------~~~l~~~~~l~G~~~~~~~~-~~~~~i~~~~~~ 234 (470)
..+....++++++-. + -|...+..++.-+-.+.... .......|.+..
T Consensus 100 ~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~ 179 (509)
T COG3202 100 GFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTI 179 (509)
T ss_pred HHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 666666666553321 0 02222222222222222222 456677888888
Q ss_pred cchhhHHHHHHhhhhhHHHHHHhhHHhhhcccC----------chHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCcc
Q 012159 235 EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG----------WESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRS 304 (470)
Q Consensus 235 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (470)
+|-.|.+++++.+.+++..++..+..++..+.. .+..+.+.++.+++......++.+.-...+....+..
T Consensus 180 ~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~~ 259 (509)
T COG3202 180 EEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLRAK 259 (509)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHh
Confidence 999999999999999999999998888876321 2333333444434444443333322111111000000
Q ss_pred chhhhhhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhH---HHHHHH
Q 012159 305 NYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAA---WVSILP 381 (470)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~---~~~~~~ 381 (470)
+. ...+..+..-..+++.+.++|-++.+++...+++.+...+-...-.-.++.+-...+..+ -+....
T Consensus 260 ~k---------k~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~t 330 (509)
T COG3202 260 KK---------KKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWT 330 (509)
T ss_pred cc---------cccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHH
Confidence 00 000000000012356778889999999888888888777766555555544333333222 233334
Q ss_pred HHH-HHHHHHHHHHHHHHHHhcC
Q 012159 382 PLA-SVLVTSIAAQFADNLIATG 403 (470)
Q Consensus 382 ~~~-~~~~~~~~g~l~dr~~~~~ 403 (470)
++. .++...+++.+.+|.|...
T Consensus 331 gvv~~v~~~~~~s~~ir~~GW~~ 353 (509)
T COG3202 331 GVVSLVVFLFPGSNLIRRVGWFT 353 (509)
T ss_pred HHHHHHHHHhhhHHHHHHhhHHH
Confidence 444 4555667788888888664
No 251
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.23 E-value=2.1e-05 Score=78.92 Aligned_cols=181 Identities=16% Similarity=0.143 Sum_probs=127.2
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHhHHhh-hhhcCCCc---hhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHH-HHHHHH
Q 012159 114 KLIGTTSLAFVICNMDKVNLSVAIIPM-SHRFGWNS---SVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVL-QTGVLI 188 (470)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~---~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~-~~~~~~ 188 (470)
+.+...++..++.++.......+.|.. ..-++-+. ...++......++..++..+.|.+..++++-|.. +++.++
T Consensus 310 r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~ 389 (599)
T PF06609_consen 310 RGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVL 389 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHH
Confidence 445555555666666556666666663 33444444 3578888889999999999999999988875544 566656
Q ss_pred HHHHHHHHHHh-hhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcc--
Q 012159 189 WSLATALLPLL-AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-- 265 (470)
Q Consensus 189 ~~~~~~~~~~~-~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-- 265 (470)
+.++.-+++.. .++....+..-++.|++.|...........-..|+++.+.+.|+......+|+.+|..+..-+...
T Consensus 390 ~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~n~~ 469 (599)
T PF06609_consen 390 MTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFTNKL 469 (599)
T ss_pred HHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhh
Confidence 55544344322 334445667788899999888878777777788989999999999999999988887765433210
Q ss_pred ------------------------------------------------------------cCchHHHHHHHHHHHHHHHH
Q 012159 266 ------------------------------------------------------------LGWESVFYIFGLLGIAWFSG 285 (470)
Q Consensus 266 ------------------------------------------------------------~g~~~~~~~~~~~~~~~~~~ 285 (470)
.++|++|+....++.+.+++
T Consensus 470 ~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~iPGit~~i~~a~~~A~~~aYa~ay~~V~~~siaFG~vaiia 549 (599)
T PF06609_consen 470 PKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAIPGITPEIIAAVVAAFQEAYAHAYRYVYYSSIAFGVVAIIA 549 (599)
T ss_pred hHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 04588888888888888888
Q ss_pred HHhhccCCC
Q 012159 286 FKILQEGET 294 (470)
Q Consensus 286 ~~~~~~~~~ 294 (470)
.+++++.++
T Consensus 550 a~fl~d~~~ 558 (599)
T PF06609_consen 550 ALFLGDIDK 558 (599)
T ss_pred HHHcCChHH
Confidence 888876543
No 252
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.06 E-value=2.5e-05 Score=55.98 Aligned_cols=65 Identities=20% Similarity=0.210 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 012159 340 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVE 405 (470)
Q Consensus 340 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~ 405 (470)
.+-..+++...+...+..++|.|+++ .|+++.+.|++.++..+..+++.+++|+++||.++++..
T Consensus 4 ~lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~ 68 (77)
T PF12832_consen 4 PLKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVI 68 (77)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHH
Confidence 45566777788888999999999995 799999999999999999999999999999999999743
No 253
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.04 E-value=4.6e-05 Score=77.43 Aligned_cols=156 Identities=17% Similarity=0.057 Sum_probs=104.7
Q ss_pred HHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHH--HHHHHHHHHH
Q 012159 137 IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMP--GLVLSRVLVG 214 (470)
Q Consensus 137 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~l~G 214 (470)
++.....+|.+..... ..............+...|++|||.....+.++..++.++.++...... ...+...+..
T Consensus 341 l~~~~~~lg~~~~~~~---~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (521)
T KOG0255|consen 341 LSLNVSGLGGNIYLNF---TLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGK 417 (521)
T ss_pred hhhhhhhcCchHHHHH---HHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHH
Confidence 4444445554443333 3333344455555689999999999999999998888888766554322 3555555556
Q ss_pred hhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHH-HHHHhhccCC
Q 012159 215 IGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF-SGFKILQEGE 293 (470)
Q Consensus 215 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~ 293 (470)
++.+..+.....+.+|.+|...|..+.+.......+|.+++|.+...... ......+.+.+.+..+.. +...++||+.
T Consensus 418 ~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~ 496 (521)
T KOG0255|consen 418 FFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETK 496 (521)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccC
Confidence 66666667779999999999999999999999999999999988765544 222223333354444444 4447777765
Q ss_pred CCC
Q 012159 294 TSN 296 (470)
Q Consensus 294 ~~~ 296 (470)
...
T Consensus 497 ~~~ 499 (521)
T KOG0255|consen 497 GKP 499 (521)
T ss_pred CCC
Confidence 543
No 254
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.94 E-value=0.00032 Score=69.01 Aligned_cols=124 Identities=21% Similarity=0.217 Sum_probs=105.9
Q ss_pred hhhhhcCCCchhhHHHHHHHHHHHHHhhhhhH-HHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhc
Q 012159 139 PMSHRFGWNSSVAGLVQSSFFWGYALSQLPGG-WLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGE 217 (470)
Q Consensus 139 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g-~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~ 217 (470)
.+...++++..+.+...+...+...+++++.. .+...+|-|+++.+|++...+..+..+ +.+..|+++...++.++.
T Consensus 267 yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~a-f~~~~w~~~~~~v~~~~~- 344 (463)
T KOG2816|consen 267 YLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFA-FATETWMMFAAGVVVALA- 344 (463)
T ss_pred EEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHH-HhccchhhhHHHHHHHhh-
Confidence 35667899999999999999999999998877 677788999988899888888887776 445558888877777666
Q ss_pred cCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhc
Q 012159 218 GVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE 264 (470)
Q Consensus 218 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 264 (470)
....|...+.++.+..++++|+++++......+...++|.+-+.+..
T Consensus 345 ~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 345 GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 57789999999999999999999999999999999999999888754
No 255
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.85 E-value=0.00011 Score=71.01 Aligned_cols=111 Identities=21% Similarity=0.268 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHHHHHHHHh--hhH------HHHHHHHHHHHHhhccCchhhHHHHhhhccCcc---chhhHHHHHHhhh
Q 012159 180 KVLQTGVLIWSLATALLPLL--AGF------MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE---ERSRAVSFVFGGL 248 (470)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~--~~~------~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 248 (470)
|++.++.+++.+|.+++... ... .+.++++.++.++|.|+.-|...++.+|.++++ +|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 46777888888888774322 222 246888889999999999999999999999765 5677888899999
Q ss_pred hhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHHHHHhhc
Q 012159 249 SFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQ 290 (470)
Q Consensus 249 ~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 290 (470)
++|..+++.+.+++-++.||.+.|.+.++..++..+.++.-.
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~ 123 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGR 123 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999988877776655543
No 256
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.70 E-value=0.0012 Score=63.03 Aligned_cols=116 Identities=17% Similarity=0.078 Sum_probs=80.4
Q ss_pred cCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHH--HHHHHHH--HhhhHHHHHHHHHHHHHhhccC
Q 012159 144 FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS--LATALLP--LLAGFMPGLVLSRVLVGIGEGV 219 (470)
Q Consensus 144 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~--~~~~~~~--~~~~~~~~l~~~~~l~G~~~~~ 219 (470)
+.-...+.-+...+|.+|..++.--...+ |+ |++.+.+.+-.. +..++-+ .+.++.|.+++..+..|+..|.
T Consensus 276 ~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa 351 (402)
T PF02487_consen 276 FFSPRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGA 351 (402)
T ss_pred CCCHHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhH
Confidence 33345677788888888777665432221 33 444444332221 1111111 1235567788888999999999
Q ss_pred chhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhh
Q 012159 220 SPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII 263 (470)
Q Consensus 220 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 263 (470)
.+......+.+..++++|..++|....+-++|..++.+++-.+-
T Consensus 352 ~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 352 SYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988876553
No 257
>PRK03612 spermidine synthase; Provisional
Probab=97.69 E-value=0.0045 Score=62.27 Aligned_cols=138 Identities=17% Similarity=0.126 Sum_probs=83.3
Q ss_pred hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHH-HHHHHH-HHHHHHHHhh----hHHHHHHHHHHHH
Q 012159 140 MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQT-GVLIWS-LATALLPLLA----GFMPGLVLSRVLV 213 (470)
Q Consensus 140 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~-~~~~~~-~~~~~~~~~~----~~~~~l~~~~~l~ 213 (470)
+..-+|-+..+.+.+.+++.++..+|+.+++++.++.-++...+- ...+.+ ++..++.... .....++...++.
T Consensus 41 l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 120 (521)
T PRK03612 41 ASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLI 120 (521)
T ss_pred HHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334578888999999999999999999999988744332222111 111111 1111111111 1112233444566
Q ss_pred HhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhc-ccCchHHHHHHHHH
Q 012159 214 GIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-NLGWESVFYIFGLL 278 (470)
Q Consensus 214 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~g~~~~~~~~~~~ 278 (470)
++..|+..|....+..+... ++-++..|-.+....+|+++|.++.+++.- .+|-..+.++.+.+
T Consensus 121 ~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l 185 (521)
T PRK03612 121 GLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSL 185 (521)
T ss_pred HHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 77777777777766655332 345677888888899999999988887653 66755444444443
No 258
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=97.68 E-value=0.0055 Score=59.44 Aligned_cols=276 Identities=11% Similarity=-0.014 Sum_probs=146.9
Q ss_pred HHHHHHHHHHhhhhhHHHhHHhhhhh--cCCCchhhHHHHHHHHHHHHHhhhhhHHHhh-----hhcCcHHHHHH-HHHH
Q 012159 118 TTSLAFVICNMDKVNLSVAIIPMSHR--FGWNSSVAGLVQSSFFWGYALSQLPGGWLAK-----IFGGRKVLQTG-VLIW 189 (470)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d-----r~g~r~~~~~~-~~~~ 189 (470)
++.+.+++++.-.+.....+|.+.++ -+.+..|.+...- ....+. .-++|.++.| |+||||..++- -.+.
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSl-a~~PfS-lKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~ 81 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSL-ASYPFS-LKLLWAPIVDSVYSKRIGRRKSWIIPIQYLS 81 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCCChhHheeeee-eechhH-HHHhhhhhhhhhcccccCCcchhhhHHHHHH
Confidence 45566777776666555568887777 6778887765322 111211 3356666666 78999976653 2333
Q ss_pred HHHHHHHHHhh----------h-----------H--HHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHh
Q 012159 190 SLATALLPLLA----------G-----------F--MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFG 246 (470)
Q Consensus 190 ~~~~~~~~~~~----------~-----------~--~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~ 246 (470)
++.++.++... + + ...+....++.=+..+....+.-.+.-.+..+++++.+......
T Consensus 82 g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtv 161 (544)
T PF13000_consen 82 GILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTV 161 (544)
T ss_pred HHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHh
Confidence 33333332222 0 0 01123333344445566667777777777788999988888888
Q ss_pred hhhhHHHHHHhhHHhhhcc-------------cC---chHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCC-Cccchhh-
Q 012159 247 GLSFGSVAGLLLAPPIIEN-------------LG---WESVFYIFGLLGIAWFSGFKILQEGETSNGATLA-PRSNYIN- 308 (470)
Q Consensus 247 ~~~~g~~~g~~~~~~l~~~-------------~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 308 (470)
+.++|..++..+.-.+-+. .| ...-..+.|.+.++..+...+++++++..+.... +..+...
T Consensus 162 G~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~~~~~~~~~ 241 (544)
T PF13000_consen 162 GQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLPKIEPINKSDG 241 (544)
T ss_pred HhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCccccccccccc
Confidence 8888888876655444321 01 1122233444444444444454444332211110 0000000
Q ss_pred hhhh----hhhhH----Hhhh-ccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHH
Q 012159 309 MKKS----LSASL----EEMG-ESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSI 379 (470)
Q Consensus 309 ~~~~----~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~ 379 (470)
..+. ..+.. ++.. -...-..+.+++|-|.+..+.+.....-.++...-.....-+.| .|++.++.+++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LAl~~l 320 (544)
T PF13000_consen 242 KSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLALLVL 320 (544)
T ss_pred cccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhHHHHH
Confidence 0000 00000 0000 00001123456778888888888888888877777777777775 5999998876554
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 012159 380 LPPLASVLVTSIAAQFADNLI 400 (470)
Q Consensus 380 ~~~~~~~~~~~~~g~l~dr~~ 400 (470)
+ .+...++.|+++.|+.
T Consensus 321 i----~~P~qii~~~~~~Kws 337 (544)
T PF13000_consen 321 I----DFPFQIILPYYIGKWS 337 (544)
T ss_pred H----hhhHHHHHHHHhhhhh
Confidence 4 4444555555555554
No 259
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.62 E-value=8.2e-05 Score=70.87 Aligned_cols=126 Identities=13% Similarity=0.157 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch---------
Q 012159 337 AVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT--------- 407 (470)
Q Consensus 337 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~--------- 407 (470)
.+..+.+...+..+-.+.+...++-. ++.+|.++...|++.....+...+..+++|++.||++|++++..
T Consensus 34 ~l~il~~vnlmny~Dr~~iagv~~~v-~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av 112 (493)
T KOG1330|consen 34 TLVILCLVNLMNYADRYTIAGVLKEV-QTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAV 112 (493)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHH-HHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHH
Confidence 34445555555555555555544443 45689999999999999999999999999999999999998776
Q ss_pred ----------------------------------------------HHHHHHhhhhHHHHHHHHHHHhhccCCceehhhH
Q 012159 408 ----------------------------------------------MGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLF 441 (470)
Q Consensus 408 ----------------------------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~ 441 (470)
+++++....+|+.+|.+.++.+.+..+.|+..+.
T Consensus 113 ~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~ 192 (493)
T KOG1330|consen 113 FASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFR 192 (493)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEE
Confidence 8889999999999999999999988888999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCC
Q 012159 442 APSIFFYLTGTIVWLAFASSKP 463 (470)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~ 463 (470)
+.+++.++++++.++..++.++
T Consensus 193 ~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 193 GSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred eehHHHHHHHHHHHhhccCccc
Confidence 9888888888888887776554
No 260
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.59 E-value=0.001 Score=61.02 Aligned_cols=258 Identities=12% Similarity=0.015 Sum_probs=152.3
Q ss_pred hcCCCchhhH-HHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCch
Q 012159 143 RFGWNSSVAG-LVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSP 221 (470)
Q Consensus 143 ~~g~s~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~ 221 (470)
+.+++..+.. -+.-+..=.+.+.-++.=.+.|-...|+++++-.+.......++ ...++.+.+=+.-++.|... +..
T Consensus 35 ~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~l-v~g~sV~~mQvlE~FyG~~t-AaE 112 (433)
T KOG3810|consen 35 DKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIML-VFGPSVKAMQVLEFFYGPAT-AAE 112 (433)
T ss_pred CCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHH-HhcCCchheeeehhhcChHH-HHH
Confidence 4455555433 12222223344555566678898888888877655444444333 45666677778888888875 445
Q ss_pred hhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccC--chHHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 012159 222 SAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG--WESVFYIFGLLGIAWFSGFKILQEGETSNGAT 299 (470)
Q Consensus 222 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (470)
.+.++++-...+++++.++.|...+..-.|-.+|..++..+..... +...=.+.-....+.....+++|++++..-..
T Consensus 113 IAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~ 192 (433)
T KOG3810|consen 113 IAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFH 192 (433)
T ss_pred HhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhh
Confidence 6778888888899999999999999999999999999988876433 33222233333344455566666655321111
Q ss_pred CCCccc-hhhhhhhhhh-hHHh-hh--ccCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCchh
Q 012159 300 LAPRSN-YINMKKSLSA-SLEE-MG--ESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELS-LNLTE 373 (470)
Q Consensus 300 ~~~~~~-~~~~~~~~~~-~~~~-~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g-~s~~~ 373 (470)
..+++. ....++...+ +..+ .. ...-...+....+||++....+...+...+++.+..+......+... -....
T Consensus 193 ~~~~~~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vy 272 (433)
T KOG3810|consen 193 RLEDKISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVY 272 (433)
T ss_pred cccccceeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhh
Confidence 100000 0000000000 0000 00 00001123456788888888888888888888888887777765421 11122
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 012159 374 AAWVSILPPLASVLVTSIAAQFADNLIAT 402 (470)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~ 402 (470)
.|..-++..+.+.++.+..|.+--++.|.
T Consensus 273 NG~veAv~tlLGa~~~~~~g~l~i~w~r~ 301 (433)
T KOG3810|consen 273 NGAVEAVSTLLGAIAALAAGYLNINWNRW 301 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHheeeccchh
Confidence 35667777788888888888886555554
No 261
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.57 E-value=0.0018 Score=63.10 Aligned_cols=77 Identities=13% Similarity=0.086 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHhCCCchh-hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch-------------------------
Q 012159 354 TCLSWLPTYFSEELSLNLTE-AAWVSILPPLASVLVTSIAAQFADNLIATGVETT------------------------- 407 (470)
Q Consensus 354 ~~~~~~~~~~~~~~g~s~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~------------------------- 407 (470)
....+...++.+.+|++..+ .|.+...+..+..+..+++|+++||+|.|+.+..
T Consensus 43 ~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R 122 (511)
T TIGR00806 43 PGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLME 122 (511)
T ss_pred chHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555677789999999 9999999999999999999999999999987775
Q ss_pred -----------------------------HHHHHHhhhhHHHHHHHHHHHhh
Q 012159 408 -----------------------------MGITNTVGAVPGIVGVALTGYLL 430 (470)
Q Consensus 408 -----------------------------~g~~~~~~~~~~~ig~~~~g~l~ 430 (470)
.+..+....+|.++++++.+++.
T Consensus 123 ~llGvaEA~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~ 174 (511)
T TIGR00806 123 VFYSVTMAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV 174 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888888999999999999854
No 262
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.49 E-value=0.0044 Score=57.84 Aligned_cols=42 Identities=10% Similarity=0.022 Sum_probs=39.0
Q ss_pred HhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch
Q 012159 366 ELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT 407 (470)
Q Consensus 366 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~ 407 (470)
.+|++..+++.++....+.+.+...+.|.++||+|||+....
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~ 104 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLL 104 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHH
Confidence 589999999999999999999999999999999999987665
No 263
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=97.44 E-value=0.059 Score=49.45 Aligned_cols=73 Identities=15% Similarity=0.148 Sum_probs=52.0
Q ss_pred HHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhcc
Q 012159 158 FFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSI 232 (470)
Q Consensus 158 ~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~ 232 (470)
..+..+...++.+.++.++|-|+++.++...+...... -.-+.+..++....+.|++.+..+..--+++++.-
T Consensus 67 ~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~--Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 67 LYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAA--NLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh--hcchhHHhhccHHHhhccccccccccCcceecHHH
Confidence 34444566666779999999999999887766543211 12344578888999999999988877777766544
No 264
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.34 E-value=0.0071 Score=58.74 Aligned_cols=140 Identities=20% Similarity=0.091 Sum_probs=103.9
Q ss_pred hhHHHHHHHHHHHHHhhhhhHHHhhhhcCc-------HHHHHHHHHHHHHHHHHHHh----h-----hHHHHHHHHHHHH
Q 012159 150 VAGLVQSSFFWGYALSQLPGGWLAKIFGGR-------KVLQTGVLIWSLATALLPLL----A-----GFMPGLVLSRVLV 213 (470)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-------~~~~~~~~~~~~~~~~~~~~----~-----~~~~~l~~~~~l~ 213 (470)
...+..++..+..++..++..++..+.+++ .-+.++..+++.+.+++... . .+.+.++...+++
T Consensus 325 p~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~ 404 (498)
T COG3104 325 PPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQ 404 (498)
T ss_pred CHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHH
Confidence 356778888888888888888888885443 23455666666666555332 1 2357888999999
Q ss_pred HhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHh------hhcccCchHHHHHHHHHHHHHHHHHH
Q 012159 214 GIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPP------IIENLGWESVFYIFGLLGIAWFSGFK 287 (470)
Q Consensus 214 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~------l~~~~g~~~~~~~~~~~~~~~~~~~~ 287 (470)
++|+=+..|...+++.+..|+.-.+..++.+......|..++..+++. ..+.......|+..+...++..+..+
T Consensus 405 s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~ 484 (498)
T COG3104 405 SFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLL 484 (498)
T ss_pred HHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998888888888877773 23344566778888877766655544
Q ss_pred hh
Q 012159 288 IL 289 (470)
Q Consensus 288 ~~ 289 (470)
.+
T Consensus 485 ~~ 486 (498)
T COG3104 485 LL 486 (498)
T ss_pred Hh
Confidence 33
No 265
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.33 E-value=0.012 Score=59.66 Aligned_cols=176 Identities=18% Similarity=0.074 Sum_probs=128.3
Q ss_pred HHHHHHHHHHHHHHHhhh-hhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhh-cCcHHHHHHHHHHH
Q 012159 113 YKLIGTTSLAFVICNMDK-VNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF-GGRKVLQTGVLIWS 190 (470)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~ 190 (470)
|+....++....+.-+.. ......+.++..+++.+...+.-....+.-......+.++.++|-| ||-+++.++.++..
T Consensus 36 ~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~ 115 (571)
T KOG1237|consen 36 WLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISL 115 (571)
T ss_pred hHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 444444433333333333 3345667778888998888888888888888889999999999965 88888888888777
Q ss_pred HHHHHHHHhhhH------------------------HHHHHHHHHHHHhhccCchhhHHHHhhhccC---cc-c--hhhH
Q 012159 191 LATALLPLLAGF------------------------MPGLVLSRVLVGIGEGVSPSAATDLIARSIP---LE-E--RSRA 240 (470)
Q Consensus 191 ~~~~~~~~~~~~------------------------~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~---~~-~--r~~~ 240 (470)
++..++.+.+.- ...++...-+..+|.|+.-|...+.-+|-++ ++ + +...
T Consensus 116 ~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~f 195 (571)
T KOG1237|consen 116 LGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSF 195 (571)
T ss_pred HHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccc
Confidence 776554322110 1246666677788999999999999999997 22 2 2367
Q ss_pred HHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHHHHHh
Q 012159 241 VSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKI 288 (470)
Q Consensus 241 ~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 288 (470)
+.++....++|..++-.+..+.-+..||.+.|.+..+..++.+++++.
T Consensus 196 FnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 196 FNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHc
Confidence 888888899999999888888878899999999988876666555443
No 266
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.26 E-value=0.00097 Score=63.55 Aligned_cols=176 Identities=12% Similarity=-0.029 Sum_probs=113.5
Q ss_pred HHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcC-cHHHHHHHHHHHHHHHH
Q 012159 117 GTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGG-RKVLQTGVLIWSLATAL 195 (470)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~-r~~~~~~~~~~~~~~~~ 195 (470)
.++.+++.+.....+.....+......-|.+....|++.....++.++++.+.|.+.||... |.++++......++.+.
T Consensus 269 ~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~ 348 (480)
T KOG2563|consen 269 IILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLM 348 (480)
T ss_pred HHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 33444444444444555555554445567777889999999999999999999999999865 44555444444444222
Q ss_pred HHHh---hhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccC----c
Q 012159 196 LPLL---AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG----W 268 (470)
Q Consensus 196 ~~~~---~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g----~ 268 (470)
+... ....+.++....+.|++.....|...-+-.|..-|..-+.-.|+.+....+-+++-..+-+...+..+ +
T Consensus 349 l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~ 428 (480)
T KOG2563|consen 349 LLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNT 428 (480)
T ss_pred HHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCC
Confidence 2111 12234566777788998889999988888887766777778888888777777777777777776555 3
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccC
Q 012159 269 ESVFYIFGLLGIAWFSGFKILQEG 292 (470)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~ 292 (470)
...-+......++..++..+++++
T Consensus 429 ~~~~i~~~~~~~l~~~lva~~r~~ 452 (480)
T KOG2563|consen 429 FPANIFLTVSALLGAILVAFFRPD 452 (480)
T ss_pred ccchhHhHHHHHHHHHHHhhhhhh
Confidence 333333344444444444455443
No 267
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.13 E-value=0.0013 Score=64.22 Aligned_cols=175 Identities=15% Similarity=0.097 Sum_probs=108.7
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHh-HHhhhhhcCCCchhhHH----HHHHHHHHHHHhhhhhHHHh-hhhcCcHHHHHH
Q 012159 112 RYKLIGTTSLAFVICNMDKVNLSVA-IIPMSHRFGWNSSVAGL----VQSSFFWGYALSQLPGGWLA-KIFGGRKVLQTG 185 (470)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~s~~~~~~----~~~~~~~~~~~~~~~~g~l~-dr~g~r~~~~~~ 185 (470)
.|...+.+.+..+............ -+.....++.+..+.-. ..++..+......+..+... .++.+|+.+..+
T Consensus 260 d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~g 339 (488)
T KOG2325|consen 260 DWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRIILLG 339 (488)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeeeh
Confidence 4566666666666666665554444 33455566776665544 33444433333333333333 333455655555
Q ss_pred HHHHHHHHHHHHHh----h------h--------------------HHHHHHH-HHHHHHhhccCchhhHHHHhhhccCc
Q 012159 186 VLIWSLATALLPLL----A------G--------------------FMPGLVL-SRVLVGIGEGVSPSAATDLIARSIPL 234 (470)
Q Consensus 186 ~~~~~~~~~~~~~~----~------~--------------------~~~~l~~-~~~l~G~~~~~~~~~~~~~i~~~~~~ 234 (470)
.++......+.... . + +.+.+++ .-++.|.+.-.......++-++...+
T Consensus 340 ~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp 419 (488)
T KOG2325|consen 340 FLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGP 419 (488)
T ss_pred HHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCC
Confidence 34333333222110 0 0 0112233 34566777777777889999999999
Q ss_pred cchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHHHH
Q 012159 235 EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGF 286 (470)
Q Consensus 235 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 286 (470)
++++.+.++++....++..+||++........|.|+...+.++..++....+
T Consensus 420 ~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l~ 471 (488)
T KOG2325|consen 420 RDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAALW 471 (488)
T ss_pred ccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888877776655544333
No 268
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.01 E-value=0.0028 Score=62.54 Aligned_cols=149 Identities=15% Similarity=0.038 Sum_probs=107.1
Q ss_pred CCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhh---------hHHHHHHHHHHHHHhh
Q 012159 146 WNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA---------GFMPGLVLSRVLVGIG 216 (470)
Q Consensus 146 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~---------~~~~~l~~~~~l~G~~ 216 (470)
+++...|.+..+..++..++..+...+.-+..-|+++..+.++.++..+.-.... ++.+..+.--++..+.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 8899999999889999999999998888888888888887776655443211111 1112223334555555
Q ss_pred ccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCc--------hHHHHHHHHHHHHHHHHHHh
Q 012159 217 EGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW--------ESVFYIFGLLGIAWFSGFKI 288 (470)
Q Consensus 217 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~--------~~~~~~~~~~~~~~~~~~~~ 288 (470)
....+-....++++..|+..-|..+++..+..++|..++..++..+.+.++. .+..++..++.++.+....+
T Consensus 332 ~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~l 411 (433)
T PF03092_consen 332 GMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFL 411 (433)
T ss_pred HHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHH
Confidence 5666677788999999999999999999999999999999999998876652 34445555555555555556
Q ss_pred hccCCC
Q 012159 289 LQEGET 294 (470)
Q Consensus 289 ~~~~~~ 294 (470)
+++.++
T Consensus 412 Lp~~~~ 417 (433)
T PF03092_consen 412 LPPQKR 417 (433)
T ss_pred cCCCch
Confidence 665443
No 269
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.97 E-value=0.014 Score=56.80 Aligned_cols=128 Identities=18% Similarity=0.067 Sum_probs=94.0
Q ss_pred HHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHH---Hhhh------HH
Q 012159 133 LSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP---LLAG------FM 203 (470)
Q Consensus 133 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~---~~~~------~~ 203 (470)
+...+..+....|+++..+|..-+...+....+.+...++.+|+|..+.-+++...-.++..+.. +... +.
T Consensus 277 f~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~ 356 (432)
T PF06963_consen 277 FGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISA 356 (432)
T ss_pred CcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHH
Confidence 34444455556699999999999999999999999999999999998877776543322221111 1111 22
Q ss_pred HHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHH
Q 012159 204 PGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAP 260 (470)
Q Consensus 204 ~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 260 (470)
..++.+-++.=+|.-.+.....-++.|..|+++||...|.-.+..++-..+...++-
T Consensus 357 ~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 357 YLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTI 413 (432)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 344445555556667788888999999999999999999999988888777766544
No 270
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=96.79 E-value=0.0075 Score=62.54 Aligned_cols=151 Identities=16% Similarity=0.165 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHhhhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHH-HHHHhhhhhHHHhhhhcC--cHHHHHHHHHHH
Q 012159 115 LIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFW-GYALSQLPGGWLAKIFGG--RKVLQTGVLIWS 190 (470)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g~--r~~~~~~~~~~~ 190 (470)
.++...+..++.......+..++|. +.+.+|+++.+++++.+...+ +.+++.+++|+++||++. |+.+.++.++..
T Consensus 331 ~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~ 410 (633)
T TIGR00805 331 IYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLST 410 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHH
Confidence 3444555555666666666667777 555799999999999988776 568999999999999984 455555555444
Q ss_pred HHHHHHHH---------------------------hh---------h---------------------------------
Q 012159 191 LATALLPL---------------------------LA---------G--------------------------------- 201 (470)
Q Consensus 191 ~~~~~~~~---------------------------~~---------~--------------------------------- 201 (470)
++.++... .+ .
T Consensus 411 ~~~~~~~~~~~~~C~~~~~agv~~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~~~~~~~ 490 (633)
T TIGR00805 411 LSYLLCSPLFLIGCESAPVAGVNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGCSMSVGTGSNMV 490 (633)
T ss_pred HHHHHHHHHHeecCCCCccceeeccCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccCCCCccCCCCcce
Confidence 44322110 00 0
Q ss_pred -------------------------H-HHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhh-hhHHHH
Q 012159 202 -------------------------F-MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGL-SFGSVA 254 (470)
Q Consensus 202 -------------------------~-~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~-~~g~~~ 254 (470)
+ +..+++..++..+..+.........+-+..|+++|..++|+..... -+|.+-
T Consensus 491 y~~CsCi~~~~~~~a~~g~C~~~C~~~~~~f~~~~~~~~~~~~~~~~p~~~i~lR~V~~~~rs~alg~~~~~~rllg~iP 570 (633)
T TIGR00805 491 YTNCSCVQTPGNSSAKKGLCNPPCATSLLYFLILFIPLSFIAFITAVPLYMVLLRVVNPEEKSLAIGLQWLCMRVFATIP 570 (633)
T ss_pred ecccccccCCCCCCCcCCCCCcccchhHHHHHHHHHHHHHHHHhccCchheEEeeccCcccchHHhhHHHHHHHHhcCCC
Confidence 0 1123333333333333444445556667788899999999966555 468889
Q ss_pred HHhhHHhhhcc
Q 012159 255 GLLLAPPIIEN 265 (470)
Q Consensus 255 g~~~~~~l~~~ 265 (470)
+|++.|+++|.
T Consensus 571 ~pi~fG~~iD~ 581 (633)
T TIGR00805 571 APILFGLLIDV 581 (633)
T ss_pred hhHHHhhhhhc
Confidence 99999998886
No 271
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=96.62 E-value=0.02 Score=50.90 Aligned_cols=101 Identities=17% Similarity=0.160 Sum_probs=56.4
Q ss_pred cchhhHHHHHHhhhhhHHHHHHhhHHhh---hc--ccCchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhh
Q 012159 235 EERSRAVSFVFGGLSFGSVAGLLLAPPI---IE--NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINM 309 (470)
Q Consensus 235 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l---~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (470)
++|+....+...+.++|.++.-...-.. .+ .-.|++++.+.+++.++.+++..++-.+-...... +++++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~-~k~~k---- 76 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPK-EKQEK---- 76 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCcc-ccccc----
Confidence 4566666677777888877664332111 11 12599999998888777766666553321111111 01000
Q ss_pred hhhhhhhHHhhhccCCCCCHHHHhcCHHHHHHHHHHHHHH
Q 012159 310 KKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGS 349 (470)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 349 (470)
+.....+.....+++|++..|...+.+...-
T Consensus 77 ---------~~~~~~~~~s~~~~LK~K~tw~w~~~Yg~wL 107 (267)
T PF07672_consen 77 ---------ENSTLSKKPSYKSILKEKETWKWILIYGIWL 107 (267)
T ss_pred ---------ccccccccchHHHHHccchHHHHHHHHHHHh
Confidence 0011112356789999999888776665543
No 272
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=96.44 E-value=0.2 Score=47.89 Aligned_cols=118 Identities=17% Similarity=0.065 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHH--HHHHHHHHH
Q 012159 117 GTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTG--VLIWSLATA 194 (470)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~--~~~~~~~~~ 194 (470)
+..++..+-....+..+....+++.+++-.+.. .-.....+.+...+..++...+--+...|....++ ....++..+
T Consensus 21 ~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~-~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~~~~~l~~~~il~i 99 (406)
T KOG1479|consen 21 LIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN-SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTRVGYLLSLIAILFI 99 (406)
T ss_pred HHHHHHhcccccchHhhhccHHHHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444445666666677777666643333 33334444444444444444443333322211111 111111111
Q ss_pred -HHHHhh--------hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccc
Q 012159 195 -LLPLLA--------GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEE 236 (470)
Q Consensus 195 -~~~~~~--------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~ 236 (470)
.+.+.. ..+...++.-++.+++.+..........++ +|++.
T Consensus 100 ~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~y 149 (406)
T KOG1479|consen 100 VTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEY 149 (406)
T ss_pred HHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHH
Confidence 111111 234566677777888888877777776665 45443
No 273
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.44 E-value=0.00076 Score=68.05 Aligned_cols=153 Identities=21% Similarity=0.247 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHH-HHHHhhhhhHHHhhhhc--CcHHHHHHHHH
Q 012159 113 YKLIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFW-GYALSQLPGGWLAKIFG--GRKVLQTGVLI 188 (470)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g--~r~~~~~~~~~ 188 (470)
.+.+....++..........+..+.|. +..+|+.++.+++++..+..+ +.++|.+++|.+..|+. .|..+....+.
T Consensus 304 Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~ 383 (539)
T PF03137_consen 304 NPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVV 383 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHH
Confidence 456666777777777777788888887 667899999999998876666 56688899999999875 34444333332
Q ss_pred HHHHHHH---HHHh--h---------h---------------------------------------HHHHHHHHHHHHHh
Q 012159 189 WSLATAL---LPLL--A---------G---------------------------------------FMPGLVLSRVLVGI 215 (470)
Q Consensus 189 ~~~~~~~---~~~~--~---------~---------------------------------------~~~~l~~~~~l~G~ 215 (470)
..+..++ ..+. . + .+..+++..++.-+
T Consensus 384 ~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~ 463 (539)
T PF03137_consen 384 SIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSF 463 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHH
Confidence 2222211 0000 0 0 01123444444444
Q ss_pred hccCchhhHHHHhhhccCccchhhHHHHHHhhh-hhHHHHHHhhHHhhhcc
Q 012159 216 GEGVSPSAATDLIARSIPLEERSRAVSFVFGGL-SFGSVAGLLLAPPIIEN 265 (470)
Q Consensus 216 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~-~~g~~~g~~~~~~l~~~ 265 (470)
..+.........+-+.+++++|+.++|+..... .+|.+-||++.|.++|.
T Consensus 464 ~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 464 FTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp ---------------------------------------------------
T ss_pred HHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 445555555666678889999999999976554 57889999999999886
No 274
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=96.43 E-value=0.0047 Score=49.81 Aligned_cols=59 Identities=17% Similarity=0.220 Sum_probs=38.1
Q ss_pred HHHHHHhcCCcchHHHHHHhhhhHHHHHHHHHHHhhccCCceehhhHHHHHHHHHHHHHH
Q 012159 395 FADNLIATGVETTMGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIV 454 (470)
Q Consensus 395 l~dr~~~~~~~~~~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (470)
+.|....+..-...+..+....++..+++.+.+.+.+..+ +...+.+......+.....
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 134 (141)
T TIGR00880 76 IADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLG-WRAPFLFLAILALAAFILL 134 (141)
T ss_pred HHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccc-hHHHHHHHHHHHHHHHHHH
Confidence 4455544544555788899999999999999999987654 4444444444333333333
No 275
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.30 E-value=0.093 Score=51.37 Aligned_cols=143 Identities=17% Similarity=0.198 Sum_probs=92.8
Q ss_pred HHHHHHHHHHhhhhhHHHhHHh---hhhhcCCCch-hhHHHHHHHHHHHHHhhhhhHHHhh---hhcCcHHHHHHHHHHH
Q 012159 118 TTSLAFVICNMDKVNLSVAIIP---MSHRFGWNSS-VAGLVQSSFFWGYALSQLPGGWLAK---IFGGRKVLQTGVLIWS 190 (470)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~s~~-~~~~~~~~~~~~~~~~~~~~g~l~d---r~g~r~~~~~~~~~~~ 190 (470)
.+...++..+...+.+....|. .....+.+.. ..++......++..++..+.+.+.+ ++|+++.+.++..+..
T Consensus 244 ~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~ 323 (461)
T KOG3098|consen 244 LLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHL 323 (461)
T ss_pred HHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHH
Confidence 3444455555555555555555 2223333322 2334444445555556666666665 5789999988887776
Q ss_pred HHHHHHHHhh-----------------hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHH
Q 012159 191 LATALLPLLA-----------------GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSV 253 (470)
Q Consensus 191 ~~~~~~~~~~-----------------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 253 (470)
++.++..... ++....++..++.|++.+......+.++.+.+| ++|..+.++...-..++..
T Consensus 324 ~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~-~~~~~~fsi~kfyq~~~s~ 402 (461)
T KOG3098|consen 324 IGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYP-DDRAQAFSLFKFYQSVASC 402 (461)
T ss_pred HHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHH
Confidence 6665543221 124467788899999999999999999999994 8899998888887777777
Q ss_pred HHHhhHHh
Q 012159 254 AGLLLAPP 261 (470)
Q Consensus 254 ~g~~~~~~ 261 (470)
++-.....
T Consensus 403 v~~f~~~~ 410 (461)
T KOG3098|consen 403 VAFFFSPY 410 (461)
T ss_pred HHhhhhhh
Confidence 66554443
No 276
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.07 E-value=0.18 Score=49.60 Aligned_cols=111 Identities=14% Similarity=-0.025 Sum_probs=72.1
Q ss_pred hhHHHHHHHHHHHHHhhhhhHHHhhhhcCc--HHHHHHH--HHHHHHHHHHHHh--------hhHHHHHHHHHHHHHhhc
Q 012159 150 VAGLVQSSFFWGYALSQLPGGWLAKIFGGR--KVLQTGV--LIWSLATALLPLL--------AGFMPGLVLSRVLVGIGE 217 (470)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r--~~~~~~~--~~~~~~~~~~~~~--------~~~~~~l~~~~~l~G~~~ 217 (470)
..-.+..++.++-.+|..+..+.. .-++| ++++.+. +++.-..+++... -++-+..++..++.|+..
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltn 386 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSN 386 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhh
Confidence 345667778888888887554431 11222 3333221 2222222222111 023356777789999999
Q ss_pred cCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHh
Q 012159 218 GVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPP 261 (470)
Q Consensus 218 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 261 (470)
|-.......+..+..++++|..+-.+...+..+|..+|..++-.
T Consensus 387 Gy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~ 430 (437)
T TIGR00939 387 GYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFL 430 (437)
T ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998999999888888888888888876543
No 277
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=95.77 E-value=0.0022 Score=56.30 Aligned_cols=214 Identities=14% Similarity=0.169 Sum_probs=115.2
Q ss_pred HHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHH---------hhhhcCcHHHH-HHHH
Q 012159 118 TTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWL---------AKIFGGRKVLQ-TGVL 187 (470)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l---------~dr~g~r~~~~-~~~~ 187 (470)
...++.+.+-+..+....++-.+.++.|.++.....++-+..+.-++..++.|.. .||+|||+..- ++.+
T Consensus 21 ~yGvGHmlNDitAScWFTYlllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~wh~~gt~ 100 (412)
T KOG4830|consen 21 AYGVGHMLNDITASCWFTYLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSWHLIGTV 100 (412)
T ss_pred eechhHHHhhHHHHHHHHHHHHHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeeeeecccE
Confidence 3455667777777777777777778889999888889888999999988888744 56899887443 2222
Q ss_pred HHHHHHH-HHH--------Hhh---hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHH
Q 012159 188 IWSLATA-LLP--------LLA---GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAG 255 (470)
Q Consensus 188 ~~~~~~~-~~~--------~~~---~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 255 (470)
+.++..- ++. ..+ .+..++.+..++.|++.+..--...+.
T Consensus 101 lVslSf~~ifg~a~iF~~~~~~s~vanlglyaialvVFgv~~A~~ke~tea~---------------------------- 152 (412)
T KOG4830|consen 101 LVSLSFPMIFGFAKIFLCKSTTSEVANLGLYAIALVVFGVGWASVKESTEAL---------------------------- 152 (412)
T ss_pred EEEEechhhcCceeEEeeccHHHHHHHhHHHHHHhheeeeeeecccccHHHH----------------------------
Confidence 1111100 000 000 111222233333333332221111100
Q ss_pred HhhHHhhhcccCchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCccchhhhhhhhhhhHHhhhccCCCCCHHHHhcC
Q 012159 256 LLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRS 335 (470)
Q Consensus 256 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (470)
+||+-|....+++....+++...++++. .-. .+.. .....+|..-+++
T Consensus 153 ------------~R~~~~~~v~lG~~~~~vF~~~TrEP~~-~~~-~~~s------------------~~~Rm~W~~WF~~ 200 (412)
T KOG4830|consen 153 ------------IRLAGWLVVVLGITVAFVFYAFTREPTN-SFS-SDAS------------------ELVRMHWTSWFGH 200 (412)
T ss_pred ------------HHHhhhheeeeceeEEEEEeecccCccc-ccC-cchh------------------hhhcccchhhhhh
Confidence 1333333222222222222222222211 110 0000 1113456677777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHH
Q 012159 336 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSI 391 (470)
Q Consensus 336 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~ 391 (470)
-.++...+.+++.-.....-..+++.|..+...+.....+++-.+..+.++..+.+
T Consensus 201 v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v 256 (412)
T KOG4830|consen 201 VQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMV 256 (412)
T ss_pred hHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhh
Confidence 88888888888887777777888888888777777766666666666665555444
No 278
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=95.76 E-value=0.22 Score=49.05 Aligned_cols=52 Identities=21% Similarity=0.239 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhh
Q 012159 202 FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLL 258 (470)
Q Consensus 202 ~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 258 (470)
.++..++..++.|++.+.......++.+ .+|++ .++.+..+.+++++++.++
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~----~~~a~~~G~g~aGv~~s~~ 156 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPST----YSSAVMSGQGLAGVLTSLA 156 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH----HHHHHHhcchhHHHHHHHH
Confidence 4566777778889998888877777776 45533 4555666666666665544
No 279
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.63 E-value=0.18 Score=51.98 Aligned_cols=152 Identities=17% Similarity=0.204 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHHH-HHHhhhhhHHHhhhhc--CcHHHHHHHHHH
Q 012159 114 KLIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWG-YALSQLPGGWLAKIFG--GRKVLQTGVLIW 189 (470)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~-~~~~~~~~g~l~dr~g--~r~~~~~~~~~~ 189 (470)
++....+++..+.......+..++|. +.++||.+...+..+.+...+. .++|.+++|++..|+. .|....+.++..
T Consensus 392 ~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~ 471 (735)
T KOG3626|consen 392 PIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCS 471 (735)
T ss_pred chHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHH
Confidence 35566677777777777888888887 6678999999999988665555 4577789999999874 344444433333
Q ss_pred HHHHHH---HHHhh----------------------h-------------------------------------------
Q 012159 190 SLATAL---LPLLA----------------------G------------------------------------------- 201 (470)
Q Consensus 190 ~~~~~~---~~~~~----------------------~------------------------------------------- 201 (470)
.+..+. ..+.. .
T Consensus 472 ~l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~ 551 (735)
T KOG3626|consen 472 VLSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTS 551 (735)
T ss_pred HHHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCC
Confidence 332222 10000 0
Q ss_pred ---------------------------------HHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhh
Q 012159 202 ---------------------------------FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGL 248 (470)
Q Consensus 202 ---------------------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~ 248 (470)
.+..+++..++.-+..+...+....++-+..++++|..++|+..+..
T Consensus 552 ~~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~i 631 (735)
T KOG3626|consen 552 DGNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLI 631 (735)
T ss_pred CCceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHH
Confidence 00113333344444444445666777788889999999999966655
Q ss_pred -hhHHHHHHhhHHhhhcc
Q 012159 249 -SFGSVAGLLLAPPIIEN 265 (470)
Q Consensus 249 -~~g~~~g~~~~~~l~~~ 265 (470)
-+|.+-+|++.|+++|.
T Consensus 632 rllg~IPsPIifG~~ID~ 649 (735)
T KOG3626|consen 632 RLLGFIPSPIIFGAVIDT 649 (735)
T ss_pred HHHhcCCchHhhhhhHhh
Confidence 57999999999999984
No 280
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.46 E-value=0.098 Score=50.35 Aligned_cols=102 Identities=15% Similarity=0.004 Sum_probs=73.0
Q ss_pred CchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHH--HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhH
Q 012159 147 NSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTG--VLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAA 224 (470)
Q Consensus 147 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~ 224 (470)
...--|.+-++..+...++.+..|.+-.++.+-.-+.++ .++.+...+++ ...++.|..+++.++.+.......+.+
T Consensus 283 ~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm-~~t~~Iwv~Y~~yIif~~~y~fliTiA 361 (412)
T PF01770_consen 283 ESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLM-SFTGNIWVCYAGYIIFRSLYMFLITIA 361 (412)
T ss_pred CcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444568888899999999999999996666654444333 23333333344 466777888888888888888888888
Q ss_pred HHHhhhccCccchhhHHHHHHhhhh
Q 012159 225 TDLIARSIPLEERSRAVSFVFGGLS 249 (470)
Q Consensus 225 ~~~i~~~~~~~~r~~~~~~~~~~~~ 249 (470)
..-++.....+.-|..+|+......
T Consensus 362 ~~qIA~~l~~e~yaLVFGiNtf~Al 386 (412)
T PF01770_consen 362 SFQIAKNLSEERYALVFGINTFVAL 386 (412)
T ss_pred HHHHHHhccccceeeeeeeHHHHHH
Confidence 8888888887777888877665443
No 281
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=94.95 E-value=0.18 Score=45.96 Aligned_cols=138 Identities=17% Similarity=0.124 Sum_probs=88.5
Q ss_pred hHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhh
Q 012159 151 AGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIAR 230 (470)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~ 230 (470)
.|.+.-.-.+...+..+.+....||+.--.-..+..++.+.++++.+ ++++.++-+.+-.+..++.|.......++-+.
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVa-fs~s~~~sL~GV~~aSissGlGEiTFL~lss~ 142 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVA-FSNSVPMSLLGVVFASISSGLGEITFLALSSR 142 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEE-eccchhHHHhhhhhhhhcCCcceeehhhhhcc
Confidence 35555556666777777788888886543333334455556665553 56666777788888888877766655555443
Q ss_pred ccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcc--cCchHHHHHHHHHHHHHHHHHHhhccCCC
Q 012159 231 SIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN--LGWESVFYIFGLLGIAWFSGFKILQEGET 294 (470)
Q Consensus 231 ~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (470)
++ ....+-++.+.+.++.+|..--..+.+. +.-+.+.++...+.++.....+++.+.++
T Consensus 143 -Y~----~~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pe 203 (409)
T KOG3880|consen 143 -YP----SIVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPE 203 (409)
T ss_pred -CC----CceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCc
Confidence 33 2355667778888888888777777663 45677888877776655555555544433
No 282
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=94.95 E-value=0.19 Score=36.49 Aligned_cols=54 Identities=17% Similarity=0.303 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 012159 349 SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (470)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~ 403 (470)
..+-+.+...+|...++ .+++..+.+++.+...++..+|.+...++.++.+.++
T Consensus 5 GigRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~ 58 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRR 58 (85)
T ss_pred hhHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHH
Confidence 34556677788888775 6999999999999999999999999999988755543
No 283
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=94.20 E-value=0.016 Score=54.45 Aligned_cols=107 Identities=21% Similarity=0.185 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHHhhhhhHHHhhhh-cCcHHHHHHH--HHHHHHHHHHH-Hh---------hhHHHHHHHHHHHHHhhccC
Q 012159 153 LVQSSFFWGYALSQLPGGWLAKIF-GGRKVLQTGV--LIWSLATALLP-LL---------AGFMPGLVLSRVLVGIGEGV 219 (470)
Q Consensus 153 ~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~--~~~~~~~~~~~-~~---------~~~~~~l~~~~~l~G~~~~~ 219 (470)
....++.++-.+|..+.++..-+. .+|++.+.+. +++ +..++++ .. -++-+..++..++.|+..|-
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~f-iPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLF-IPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHH-HHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 356678888888888877643221 2444443321 121 1111221 11 12225667778899999999
Q ss_pred chhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHH
Q 012159 220 SPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAP 260 (470)
Q Consensus 220 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 260 (470)
.......+..+..++++|..+-.+...+..+|-.+|..++-
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp --HHHH-----------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999899988888888888888888776653
No 284
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=93.61 E-value=0.65 Score=48.29 Aligned_cols=44 Identities=11% Similarity=0.169 Sum_probs=28.0
Q ss_pred HHHHHHhhhhHHHHHHHHHHHhhccCC------ceehhhHHHHHHHHHHH
Q 012159 408 MGITNTVGAVPGIVGVALTGYLLDSTH------SWSMSLFAPSIFFYLTG 451 (470)
Q Consensus 408 ~g~~~~~~~~~~~ig~~~~g~l~~~~~------~~~~~~~~~~~~~~~~~ 451 (470)
..+++..+.+|+.+++.+.+++.+..+ .|...+.+.+++.+++.
T Consensus 126 F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~ 175 (654)
T TIGR00926 126 FSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILAL 175 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHH
Confidence 667777888888888888888874431 34445555444444333
No 285
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=93.22 E-value=1.6 Score=39.29 Aligned_cols=134 Identities=16% Similarity=0.026 Sum_probs=85.3
Q ss_pred hHHHHHHHHHHHHHhhhhhHHHhhhhcCc--HHHHHHHHHHHHHHHHHHHhh------hHHHHHHHHHHHHHhhccCchh
Q 012159 151 AGLVQSSFFWGYALSQLPGGWLAKIFGGR--KVLQTGVLIWSLATALLPLLA------GFMPGLVLSRVLVGIGEGVSPS 222 (470)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~r--~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~~~l~G~~~~~~~~ 222 (470)
-|.+++.++++.++|+-+..++..|-..| ..+.+..++.++...+..... .+...-+++..+.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 48899999999999999998888765543 355555444444333321111 1122335556666778899999
Q ss_pred hHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHH
Q 012159 223 AATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFS 284 (470)
Q Consensus 223 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ 284 (470)
....+-+++.|++.|...+.++..-.++-..++-..-..-....+-|..|-++.+...+..+
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i 425 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASI 425 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHH
Confidence 99999999999999999998877655554333321100000113466788887776655433
No 286
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=92.85 E-value=0.86 Score=44.19 Aligned_cols=127 Identities=19% Similarity=0.078 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhc
Q 012159 152 GLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARS 231 (470)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~ 231 (470)
.|-..++.+...+.+...-++.+|+|-|+.+..+...+.++..+.+...+. +.....+-..|+-.+.........++.+
T Consensus 335 ~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~-~~~~~~~~~~G~~~~~~~~~p~~l~~~y 413 (498)
T KOG0637|consen 335 CLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNT-YVVLSHRSTAGILSSPLLTVPYGALALY 413 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhH-HHHHHHHhhcceeecchhcccHHHHHHH
Confidence 356667888888999999999999997666666655555655555433333 5555666666654444444433333332
Q ss_pred cCc-----------------------cchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCc-hHHHHHHHHHH
Q 012159 232 IPL-----------------------EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW-ESVFYIFGLLG 279 (470)
Q Consensus 232 ~~~-----------------------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~-~~~~~~~~~~~ 279 (470)
... ..+|...|+.+....+..++..+..|.+.+.+|- +.+-...+..+
T Consensus 414 ~~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s 485 (498)
T KOG0637|consen 414 AILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVA 485 (498)
T ss_pred HHhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHH
Confidence 211 1236667778888888888888888888887763 33333333333
No 287
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=91.89 E-value=1.9 Score=38.85 Aligned_cols=72 Identities=21% Similarity=0.224 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHhhhhHHHHHHHHHHHhh
Q 012159 351 GHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMGITNTVGAVPGIVGVALTGYLL 430 (470)
Q Consensus 351 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~g~~~~~~~~~~~ig~~~~g~l~ 430 (470)
..+.+..|-|. +++.+|++.++...+.....++..+| ++.|.+.|+++.+. ...++.+...+|-.......
T Consensus 17 t~Y~Fs~yS~~-Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~-------~l~iG~~~~~~GY~~~~l~~ 87 (250)
T PF06813_consen 17 TTYTFSAYSPQ-LKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWV-------VLLIGAVLGFVGYGLLWLAV 87 (250)
T ss_pred cccchhhhhHH-HHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHH-------HHHHHHHHHHHHHHHHHHHH
Confidence 34555555555 45689999999999999999998875 88899999999884 44455555555555554444
Q ss_pred c
Q 012159 431 D 431 (470)
Q Consensus 431 ~ 431 (470)
+
T Consensus 88 ~ 88 (250)
T PF06813_consen 88 S 88 (250)
T ss_pred h
Confidence 3
No 288
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=91.88 E-value=15 Score=36.70 Aligned_cols=77 Identities=21% Similarity=0.178 Sum_probs=58.5
Q ss_pred HHHHHHHHHhhccCchhhHHHHhhhccC-ccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHH
Q 012159 206 LVLSRVLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAW 282 (470)
Q Consensus 206 l~~~~~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~ 282 (470)
+.+.-++.|+.........-..+.+.+| +++|...+|-++...++..++..++++.+.+.+||.....+.-++.++.
T Consensus 269 ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~lit 346 (472)
T TIGR00769 269 LALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLLT 346 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 3344455677767777777777777774 3578999999999888888777777799999999998888877766553
No 289
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=90.19 E-value=10 Score=37.66 Aligned_cols=67 Identities=10% Similarity=-0.007 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCch
Q 012159 203 MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE 269 (470)
Q Consensus 203 ~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~ 269 (470)
+..+++..++..+..-..+.+..+.-+++.+|.--|+.|.+.+...++|+---..+.-++++.+.++
T Consensus 405 f~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT~~ 471 (544)
T PF13000_consen 405 FLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFTVA 471 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhcccc
Confidence 3455566677777777788888999999999999999999999999988765555555555554443
No 290
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=89.77 E-value=0.71 Score=42.26 Aligned_cols=64 Identities=22% Similarity=0.090 Sum_probs=53.6
Q ss_pred hhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhh
Q 012159 199 LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI 262 (470)
Q Consensus 199 ~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 262 (470)
+.++++..++..+.-|+-.|..+....--+.+-.++++|..+++.....-++|..++.+++-.+
T Consensus 338 ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 338 FTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred hccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 4566677788888889988888888888888878889999999999999999988888776544
No 291
>PRK03612 spermidine synthase; Provisional
Probab=89.25 E-value=7.1 Score=39.59 Aligned_cols=28 Identities=14% Similarity=0.064 Sum_probs=20.9
Q ss_pred HHHHHHhhhhHHHHHHHHHHHhhc-cCCc
Q 012159 408 MGITNTVGAVPGIVGVALTGYLLD-STHS 435 (470)
Q Consensus 408 ~g~~~~~~~~~~~ig~~~~g~l~~-~~~~ 435 (470)
.|.++....+|+++|.++.|++.- ..|.
T Consensus 147 ~g~ly~~ntlGa~~G~l~~~~vLlp~lG~ 175 (521)
T PRK03612 147 VATVLAADYLGALVGGLAFPFLLLPRLGL 175 (521)
T ss_pred hhhhHhHHhHHHHHHHHHHHHHHHHhcch
Confidence 677788888888888888887654 3443
No 292
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=88.22 E-value=8.5 Score=34.64 Aligned_cols=93 Identities=14% Similarity=0.175 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHhhhhhHHHhhh-hcCcHHHHH----HHHHHHHHHHHHHHhh-h---HHHHHHHHHHHHHhhccCchh
Q 012159 152 GLVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQT----GVLIWSLATALLPLLA-G---FMPGLVLSRVLVGIGEGVSPS 222 (470)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~----~~~~~~~~~~~~~~~~-~---~~~~l~~~~~l~G~~~~~~~~ 222 (470)
....-++..+..+|....|.+... +.||+.+.. +.+++.+..++..... + ....+++..++.|++.-+..+
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 445556667777788888888774 455554432 2223333222211111 1 245677888888887766555
Q ss_pred hHHHHhhhc--cCccchhhHHHHH
Q 012159 223 AATDLIARS--IPLEERSRAVSFV 244 (470)
Q Consensus 223 ~~~~~i~~~--~~~~~r~~~~~~~ 244 (470)
+...+--|. ..|++-|..+|+.
T Consensus 224 ViL~lPhEyK~~~pk~ig~~Fg~i 247 (267)
T PF07672_consen 224 VILNLPHEYKGYNPKKIGIQFGLI 247 (267)
T ss_pred HHhcChhhhcCCCcceehhHHHHH
Confidence 544333332 2334445555443
No 293
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=87.96 E-value=20 Score=32.32 Aligned_cols=21 Identities=10% Similarity=-0.153 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 012159 346 FCGSWGHYTCLSWLPTYFSEE 366 (470)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~ 366 (470)
.+.....++....=..|++++
T Consensus 188 Av~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 188 AVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred HHHHHHHHhcccchHHHHHhC
Confidence 333444455555555677765
No 294
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=87.90 E-value=1.1 Score=43.09 Aligned_cols=111 Identities=18% Similarity=0.047 Sum_probs=69.1
Q ss_pred chhhHHHHHH-HHHHHHHhhhhhHHHhhhhcCcHHHHHHHH-HHHHHHHHHHH------hhhHHHHHHHHHHHHHhhccC
Q 012159 148 SSVAGLVQSS-FFWGYALSQLPGGWLAKIFGGRKVLQTGVL-IWSLATALLPL------LAGFMPGLVLSRVLVGIGEGV 219 (470)
Q Consensus 148 ~~~~~~~~~~-~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~-~~~~~~~~~~~------~~~~~~~l~~~~~l~G~~~~~ 219 (470)
....-++..+ +.+.-.+|.+.+.++-++- ||...+...+ ...+-.+.++- .-.+-+.++....+.|+..|-
T Consensus 281 ~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~-~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGY 359 (406)
T KOG1479|consen 281 DWYALLLVFLSFNVFDLIGSILAALLTWPD-PRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGY 359 (406)
T ss_pred hhhHHHHHHHHhHHHHHhhhhhhhcccCCC-CceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccch
Confidence 3334445555 7777788866666665543 3333332222 11222222111 112336778888999999999
Q ss_pred chhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhH
Q 012159 220 SPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA 259 (470)
Q Consensus 220 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 259 (470)
.......+..+-.+++++..+-.+.......|...|..++
T Consensus 360 ltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 360 LTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred HhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 8889999999999888887777777777777777766554
No 295
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=84.84 E-value=26 Score=30.58 Aligned_cols=44 Identities=16% Similarity=0.242 Sum_probs=24.9
Q ss_pred cchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHH
Q 012159 235 EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLG 279 (470)
Q Consensus 235 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 279 (470)
+++.+.-.......-++..+|..+++.+.+..+. +..++.+++.
T Consensus 158 ~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~-~al~~~~~~l 201 (209)
T PF06912_consen 158 KDRALRRALRYLLIILSFFIGAILGALLYRRLGF-WALLLPALLL 201 (209)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHH
Confidence 3333344445555566667777777777777774 3444444433
No 296
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=84.74 E-value=59 Score=34.60 Aligned_cols=36 Identities=8% Similarity=0.094 Sum_probs=20.6
Q ss_pred HHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHH
Q 012159 244 VFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLG 279 (470)
Q Consensus 244 ~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 279 (470)
...+..++.++..+++.++...++|..++++.++++
T Consensus 106 l~~~M~lT~livAL~a~~Li~GL~~~~ALLLGAILA 141 (810)
T TIGR00844 106 LVPVMTSGWLVIALFVWILVPGLNFPASLLMGACIT 141 (810)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhc
Confidence 333344555555555555545567777777766654
No 297
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=83.38 E-value=53 Score=33.03 Aligned_cols=78 Identities=14% Similarity=0.158 Sum_probs=57.4
Q ss_pred HHHHHHHHHhhccCchhhHHHHhhhccCc-cchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHH
Q 012159 206 LVLSRVLVGIGEGVSPSAATDLIARSIPL-EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF 283 (470)
Q Consensus 206 l~~~~~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 283 (470)
+.+.-+..|+.........-..+.+.+|. +++...+|-++...++-..+-.++++.+.+.+||+..-.+.-++.++..
T Consensus 285 Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit~ 363 (491)
T PF03219_consen 285 IALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILITG 363 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHH
Confidence 34444556777777777777777777753 5667888888888888777777889999999999988887666554443
No 298
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=83.02 E-value=19 Score=34.00 Aligned_cols=131 Identities=17% Similarity=0.091 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHH--HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhh
Q 012159 152 GLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQ--TGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIA 229 (470)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~ 229 (470)
|..-++..+..+++.+..|.+--++.|..-++ ++.+.-+...+++ ..+.+.|..+++.++...-.....+.+..-++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m-~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA 352 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIM-AQTQHIWVCYAGYVLFRVIYQLTITIATFQIA 352 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhh-hcccceehhhhhHHHHHhhHhhhhhHHHHHHH
Confidence 56667777788888999999977776653333 3333333333333 34566788888888887777778888888888
Q ss_pred hccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccC-----------chHHHHHHHHHHHHHHHHH
Q 012159 230 RSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-----------WESVFYIFGLLGIAWFSGF 286 (470)
Q Consensus 230 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-----------~~~~~~~~~~~~~~~~~~~ 286 (470)
.....+.-|..+|+.....-+ +-.++.-.+.+..| +..-|.+.+++.++.....
T Consensus 353 ~nL~~e~~gLvFGiNTFvAl~---lQsilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~ 417 (433)
T KOG3810|consen 353 RNLSSELFGLVFGINTFVALI---LQSILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIE 417 (433)
T ss_pred HhhhhhhheeeeehHHHHHHH---HHHhheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHH
Confidence 888888888888887664433 33333333344222 2344666676666654443
No 299
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=81.58 E-value=17 Score=35.29 Aligned_cols=48 Identities=13% Similarity=0.063 Sum_probs=31.1
Q ss_pred hhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcH
Q 012159 131 VNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRK 180 (470)
Q Consensus 131 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~ 180 (470)
+.+......+.+.+|++....|+. +.+.|..+--++...+.-|-|.--
T Consensus 441 YLMVWwa~~iGeT~gIp~eIMGLT--iLAAGTSIPDlitSvIVARKGlGD 488 (588)
T KOG1307|consen 441 YLMVWWANIIGETLGIPDEIMGLT--ILAAGTSIPDLITSVIVARKGLGD 488 (588)
T ss_pred HHHHHHHHHcccccCCCHHHhhhh--hhhcCCchHHhhHhhhhccccccc
Confidence 334444556778889988887764 344555566677777777766543
No 300
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=81.36 E-value=50 Score=31.31 Aligned_cols=140 Identities=18% Similarity=0.145 Sum_probs=78.4
Q ss_pred cCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHH----HHHH---HHHHHHHHHHHh-hhHHHHHHHHHHHHHh
Q 012159 144 FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQ----TGVL---IWSLATALLPLL-AGFMPGLVLSRVLVGI 215 (470)
Q Consensus 144 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~----~~~~---~~~~~~~~~~~~-~~~~~~l~~~~~l~G~ 215 (470)
.|-+..|.+++.+.+.....+|+...-++.|.--.-+.+. ++++ ...+..+.++.. .++-+.++++.++.|.
T Consensus 38 lG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~ 117 (508)
T COG4262 38 LGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGV 117 (508)
T ss_pred cCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 3667788999999999999999888887776432221111 1111 111111122111 2345678888899999
Q ss_pred hccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhh-cccCchHHHHHHHHHHHHHHHH
Q 012159 216 GEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII-ENLGWESVFYIFGLLGIAWFSG 285 (470)
Q Consensus 216 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~g~~~~~~~~~~~~~~~~~~ 285 (470)
-.|.-.|..+.++.+... +..-..+.....-.+|...+.++-.++. ...|.--.-...+++.++..+.
T Consensus 118 LVG~EiPL~mrml~~r~a--~~k~~~s~vl~~DYLGal~~gLl~p~lllP~LGl~rta~laG~~Nl~aAvv 186 (508)
T COG4262 118 LVGAEIPLLMRMLQRRQA--KAKDLGSRVLTLDYLGALAGGLLWPFLLLPRLGLVRTAALAGLCNLAAAVV 186 (508)
T ss_pred HHhcchHHHHHHHHHHHH--HHHhhhhhhhhhHhhhhhhHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHH
Confidence 999999999988887321 1111122222225566666665555443 3455433334445554444433
No 301
>PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised.; GO: 0016021 integral to membrane
Probab=78.71 E-value=42 Score=29.82 Aligned_cols=32 Identities=22% Similarity=0.398 Sum_probs=17.0
Q ss_pred hhHHHHHHhhHHhhhcccCchHHHHHHHHHHH
Q 012159 249 SFGSVAGLLLAPPIIENLGWESVFYIFGLLGI 280 (470)
Q Consensus 249 ~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~ 280 (470)
.++.++|..++.++..+.+-++.-...+++.+
T Consensus 70 ~~~~~~g~~iG~~l~~~l~~~~l~~~~~~~ll 101 (240)
T PF01925_consen 70 IIGALIGVVIGAWLLSLLPDDILKLIFGLFLL 101 (240)
T ss_pred hhHhHHHHHHHHhhhcchhHHHHHHHHHHHHH
Confidence 35556666666666665554444444444333
No 302
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=78.57 E-value=73 Score=32.40 Aligned_cols=30 Identities=17% Similarity=0.131 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 012159 376 WVSILPPLASVLVTSIAAQFADNLIATGVE 405 (470)
Q Consensus 376 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~ 405 (470)
.....+.+.+.++..+++++-..++.++..
T Consensus 301 ~~i~~y~~~~~iaGy~S~~~yk~~~g~~W~ 330 (521)
T PF02990_consen 301 AAIILYALTSFIAGYVSARLYKSFGGKKWK 330 (521)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHcCCCcee
Confidence 344455556666666666666666665544
No 303
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=75.53 E-value=10 Score=28.54 Aligned_cols=33 Identities=24% Similarity=0.198 Sum_probs=20.9
Q ss_pred HHHHHHHhhhhhHHHhhhh-cCcHHHHHHHHHHH
Q 012159 158 FFWGYALSQLPGGWLAKIF-GGRKVLQTGVLIWS 190 (470)
Q Consensus 158 ~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~ 190 (470)
-.++..+.....||+.||| |.+++.++.+++.+
T Consensus 51 efIsGilVGa~iG~llD~~agTsPwglIv~lllG 84 (116)
T COG5336 51 EFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLG 84 (116)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 3344445556679999986 66776666555443
No 304
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=72.75 E-value=60 Score=31.17 Aligned_cols=165 Identities=12% Similarity=0.003 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHhhhhhHHHhHHhhhhhcCC-CchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHH------H
Q 012159 117 GTTSLAFVICNMDKVNLSVAIIPMSHRFGW-NSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLI------W 189 (470)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~------~ 189 (470)
+.+.+++++.....-...+....++.+++- +-........+-.....+..++.|...|+..|+|++...+++ .
T Consensus 30 i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~v 109 (503)
T KOG2601|consen 30 IFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIV 109 (503)
T ss_pred ehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHH
Confidence 345566666666666666666666666653 333344444445555667778889999999999988765442 2
Q ss_pred HHHHHHHHHhhh-----HHHHHHHHHHHHHhhccCc--hhhHHH--Hhhhcc----CccchhhHH---HHHHhhhhhHHH
Q 012159 190 SLATALLPLLAG-----FMPGLVLSRVLVGIGEGVS--PSAATD--LIARSI----PLEERSRAV---SFVFGGLSFGSV 253 (470)
Q Consensus 190 ~~~~~~~~~~~~-----~~~~l~~~~~l~G~~~~~~--~~~~~~--~i~~~~----~~~~r~~~~---~~~~~~~~~g~~ 253 (470)
+.+.++..+... +.+.+..+.++.-...+.. ...+.. .-.||. ..+.+.... +.....-.....
T Consensus 110 agglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~ 189 (503)
T KOG2601|consen 110 AGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNL 189 (503)
T ss_pred HHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhc
Confidence 222222222222 2233333333332221111 111111 112332 223333333 555555666788
Q ss_pred HHHhhHHhhhcccCchHHHHHHHHHHHH
Q 012159 254 AGLLLAPPIIENLGWESVFYIFGLLGIA 281 (470)
Q Consensus 254 ~g~~~~~~l~~~~g~~~~~~~~~~~~~~ 281 (470)
+.|.+.|.+....+.|..-.+.++-.++
T Consensus 190 Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 190 LAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred hhhhhhcccceeechhhhhhhhHHHHHH
Confidence 9999999999888877655554444433
No 305
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=71.79 E-value=1.3e+02 Score=31.11 Aligned_cols=30 Identities=20% Similarity=0.197 Sum_probs=17.5
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012159 370 NLTEAAWVSILPPLASVLVTSIAAQFADNL 399 (470)
Q Consensus 370 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 399 (470)
++...++.+..++++..+--++.+....|+
T Consensus 323 ~~~~g~~~l~~~gLG~~~Plll~~~~~~~~ 352 (571)
T PRK00293 323 DLLLGGLTLYLLALGMGLPLILITTFGNKL 352 (571)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 444555666777777655555555555444
No 306
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=70.99 E-value=22 Score=32.86 Aligned_cols=35 Identities=29% Similarity=0.272 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcc
Q 012159 184 TGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEG 218 (470)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~ 218 (470)
.+.++++++.++..+..++.+.+.+..++.+++.+
T Consensus 4 ~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ 38 (284)
T PF12805_consen 4 ATLLCFALASLLVGLLFPYPWLLILVLALLTFFFG 38 (284)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 33444444444444444554555555555555443
No 307
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=68.66 E-value=28 Score=33.48 Aligned_cols=134 Identities=10% Similarity=-0.099 Sum_probs=79.7
Q ss_pred HhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhh------hcCcHHHHHHHHHHHHHHHHHHHhhh-------
Q 012159 135 VAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI------FGGRKVLQTGVLIWSLATALLPLLAG------- 201 (470)
Q Consensus 135 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr------~g~r~~~~~~~~~~~~~~~~~~~~~~------- 201 (470)
...+.-.-|.|++..+.+++.....-..++.+...|++... +-|+..+-+.... +.. ++.+..+
T Consensus 286 a~t~LkLle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~--~~t-~Lv~~~~~~~~~~G 362 (510)
T KOG3574|consen 286 ALTSLKLLEHGVPKEELALIAVPLVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGL--VQT-ALVWWTPTLGHSDG 362 (510)
T ss_pred hccchHHHHcCCChhHheeeeeehhhHHHhhhhhheeecCCCCcchHHHHhhhHHHHHHH--HHH-HHHhhhcccccCCC
Confidence 33444556789999988876643333344444444444331 1111112221111 111 1112211
Q ss_pred -----HHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHH
Q 012159 202 -----FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (470)
Q Consensus 202 -----~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~ 271 (470)
.+...+....+.+...-..+...++..+++.+|.--|+.|.+.+...++|+---..+..++.+.+++.-+
T Consensus 363 ~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv~~C 437 (510)
T KOG3574|consen 363 TFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLTVKQC 437 (510)
T ss_pred ceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCceeec
Confidence 1223334455666666667778888999999999999999999999999987777777788877766543
No 308
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=68.45 E-value=90 Score=28.05 Aligned_cols=15 Identities=13% Similarity=0.133 Sum_probs=8.0
Q ss_pred HHHHHHHHHhcCCcc
Q 012159 392 AAQFADNLIATGVET 406 (470)
Q Consensus 392 ~g~l~dr~~~~~~~~ 406 (470)
+-.++.|+..|.+..
T Consensus 260 Gk~lAskIS~rtVt~ 274 (294)
T KOG2881|consen 260 GKYLASKISVRTVTL 274 (294)
T ss_pred hHHHhhhheeEEEEE
Confidence 334566666665433
No 309
>PRK10263 DNA translocase FtsK; Provisional
Probab=68.05 E-value=23 Score=39.48 Aligned_cols=26 Identities=23% Similarity=0.156 Sum_probs=14.6
Q ss_pred hhHHHHHHhhHHhhhcccCchHHHHH
Q 012159 249 SFGSVAGLLLAPPIIENLGWESVFYI 274 (470)
Q Consensus 249 ~~g~~~g~~~~~~l~~~~g~~~~~~~ 274 (470)
..|+++|.+++.++...+|.....++
T Consensus 141 ~gGGIIG~lLs~lL~~LfG~vGa~LI 166 (1355)
T PRK10263 141 ASGGVIGSLLSTTLQPLLHSSGGTIA 166 (1355)
T ss_pred cccchHHHHHHHHHHHHHhHHHHHHH
Confidence 34666666666666665554433333
No 310
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=65.84 E-value=55 Score=27.07 Aligned_cols=33 Identities=6% Similarity=-0.122 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch
Q 012159 375 AWVSILPPLASVLVTSIAAQFADNLIATGVETT 407 (470)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~ 407 (470)
..-.++......++.++.+.+.+++|.|..+.+
T Consensus 40 ~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~l 72 (156)
T PF05978_consen 40 YYSLAILYGSFAISCLFAPSIVNKLGPKWSMIL 72 (156)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHH
Confidence 344566667777788889999999999864443
No 311
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=63.61 E-value=1.4e+02 Score=28.56 Aligned_cols=39 Identities=18% Similarity=0.372 Sum_probs=25.6
Q ss_pred hccCccchhhHHHH-HHhhhhhHHHHHHhhHHhhhcccCchHHHH
Q 012159 230 RSIPLEERSRAVSF-VFGGLSFGSVAGLLLAPPIIENLGWESVFY 273 (470)
Q Consensus 230 ~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~ 273 (470)
|+.| .+|-..++. +....+.|.++||.++ ..+||-..++
T Consensus 48 DYvP-~~~~vlfghhf~sIAGaGPI~GPi~a----a~~GwlPa~l 87 (376)
T PF02554_consen 48 DYVP-TNKWVLFGHHFASIAGAGPIVGPILA----AQFGWLPALL 87 (376)
T ss_pred CCCC-CchHHhhHHHHHHHhccccchHHHHH----HHhcchHHHH
Confidence 4445 567788887 4556677888888776 3568873333
No 312
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=58.79 E-value=1.6e+02 Score=27.49 Aligned_cols=28 Identities=18% Similarity=0.277 Sum_probs=12.7
Q ss_pred HHHHHHHHHhhccCc-hhhHHHHhhhccC
Q 012159 206 LVLSRVLVGIGEGVS-PSAATDLIARSIP 233 (470)
Q Consensus 206 l~~~~~l~G~~~~~~-~~~~~~~i~~~~~ 233 (470)
-.+..++.+++.|.+ +....-++.+...
T Consensus 263 ~~~~~~~~a~aaG~~lyv~~~ell~~~~~ 291 (317)
T PF02535_consen 263 DIVSGILLAFAAGTFLYVAFVELLPEEFH 291 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344445556655543 3333334444443
No 313
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=58.50 E-value=51 Score=34.83 Aligned_cols=43 Identities=23% Similarity=0.094 Sum_probs=29.1
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccC
Q 012159 177 GGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGV 219 (470)
Q Consensus 177 g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~ 219 (470)
||.+-++++.++++++.+...+..+..+.+....++.+++.+.
T Consensus 55 ~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~m 97 (701)
T TIGR01667 55 GRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFIL 97 (701)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 5667778888888888877766666656666666666665443
No 314
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=58.23 E-value=96 Score=29.90 Aligned_cols=73 Identities=16% Similarity=0.163 Sum_probs=49.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch
Q 012159 335 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT 407 (470)
Q Consensus 335 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~ 407 (470)
++....+.+++++..+.--+-.+-...|+..-.|-+-...+....+-+....+...+.|...|+..|.|.+..
T Consensus 26 s~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~ 98 (503)
T KOG2601|consen 26 SSTVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQT 98 (503)
T ss_pred cceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHH
Confidence 3444556667777777666666667777776555455555555555666666777778888999999886655
No 315
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=58.09 E-value=1.1e+02 Score=25.57 Aligned_cols=59 Identities=12% Similarity=0.085 Sum_probs=32.4
Q ss_pred cCccchhhHHHHHHhhhhhHHHHHHhhHHhhhccc------CchHHHHHHHHHHHHHHHHHHhhc
Q 012159 232 IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL------GWESVFYIFGLLGIAWFSGFKILQ 290 (470)
Q Consensus 232 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------g~~~~~~~~~~~~~~~~~~~~~~~ 290 (470)
++.+++.+..+.+.++.-.+...--.+=+.+.... .+...+++.++++.+..+..-.+.
T Consensus 15 ~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN~V~ 79 (166)
T PF05255_consen 15 FDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVNSVS 79 (166)
T ss_pred CCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhcccc
Confidence 44455555555555544444333333433333322 467788888888877766654443
No 316
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=57.46 E-value=55 Score=34.56 Aligned_cols=43 Identities=19% Similarity=0.079 Sum_probs=28.1
Q ss_pred hcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcc
Q 012159 176 FGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEG 218 (470)
Q Consensus 176 ~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~ 218 (470)
-||.+-++++.++++++++...+..++.+.+....++.+++.+
T Consensus 54 ~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~ 96 (704)
T TIGR01666 54 TGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFI 96 (704)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 3566667777777777777766666665666666666655543
No 317
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=56.84 E-value=78 Score=34.25 Aligned_cols=54 Identities=11% Similarity=0.071 Sum_probs=34.0
Q ss_pred hhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHH
Q 012159 131 VNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGV 186 (470)
Q Consensus 131 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 186 (470)
+.+......+...+|++....|+.+ .+++..+.-++....+-|-|.-.+.+...
T Consensus 950 yilV~~at~IG~vlGIse~VmGlTf--LA~GTSIPDlisSvivArkG~gdMAVan~ 1003 (1096)
T TIGR00927 950 YLMVWWAHQVGETIGISEEIMGLTI--LAAGTSIPDLITSVIVARKGLGDMAVSSS 1003 (1096)
T ss_pred HHHHHHHHHhhhhcCCChhhhhhhh--hhhhcccHHHHHHHHHHHccCCcceeeec
Confidence 3334445557777888888777654 34466677777777777777655444433
No 318
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=55.42 E-value=80 Score=30.06 Aligned_cols=16 Identities=31% Similarity=0.191 Sum_probs=11.5
Q ss_pred hhhhcCcHHHHHHHHH
Q 012159 173 AKIFGGRKVLQTGVLI 188 (470)
Q Consensus 173 ~dr~g~r~~~~~~~~~ 188 (470)
.||+...|++.+..-+
T Consensus 208 ~e~ft~sKllav~~si 223 (416)
T KOG2765|consen 208 VERFTLSKLLAVFVSI 223 (416)
T ss_pred cchhhHHHHHHHHHhh
Confidence 8999888887654433
No 319
>PF09512 ThiW: Thiamine-precursor transporter protein (ThiW); InterPro: IPR012652 Levels of thiamine pyrophosphate (TPP) or thiamine regulate transcription or translation of a number of thiamine biosynthesis, salvage, or transport genes in a wide range of prokaryotes. The mechanism involves direct binding, with no protein involved, to a structural element called THI found in the untranslated upstream region of thiamine metabolism gene operons. This element is called a riboswitch and is seen also for other metabolites such as FMN and glycine. This protein family consists of proteins identified in operons controlled by the THI riboswitch and designated ThiW. The hydrophobic nature of this protein and reconstructed metabolic background suggests that this protein acts in transport of a thiazole precursor of thiamine.
Probab=54.34 E-value=64 Score=26.24 Aligned_cols=70 Identities=9% Similarity=0.134 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHhhhhHHHHHHHHHHHhhccC
Q 012159 356 LSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMGITNTVGAVPGIVGVALTGYLLDST 433 (470)
Q Consensus 356 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~g~~~~~~~~~~~ig~~~~g~l~~~~ 433 (470)
..+....++..+|..+- ...=++++|.+++|.+-+|.+ |......|=....+.+|+.++.++..++....
T Consensus 50 ~Af~~sliR~~lg~Gt~-------lAfPGsm~GA~laGllyr~~~-k~~~a~lGEviGTGiIGal~sypva~~~~g~~ 119 (150)
T PF09512_consen 50 MAFITSLIRNLLGTGTL-------LAFPGSMFGALLAGLLYRKTK-KLWAAALGEVIGTGIIGALLSYPVAKLFMGKE 119 (150)
T ss_pred HHHHHHHHHHHhCCCCH-------HHhccchHHHHHHHHHHHHhC-cchHHHHHHHHhhHHHHHHHHHHHHHHHhCCc
Confidence 33444455555554321 223367788888998877775 54555566677777888888888888777643
No 320
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=51.46 E-value=36 Score=25.78 Aligned_cols=48 Identities=19% Similarity=0.227 Sum_probs=39.5
Q ss_pred hhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHH
Q 012159 149 SVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (470)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 196 (470)
...|-+.+.|.-.+++.++++++..|+..+.+.=.++..+..++..++
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI 101 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAII 101 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHhe
Confidence 567889999999999999999999999988887777777666665544
No 321
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=51.10 E-value=2.4e+02 Score=29.13 Aligned_cols=63 Identities=16% Similarity=0.177 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcc
Q 012159 203 MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN 265 (470)
Q Consensus 203 ~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 265 (470)
.++++--.++.|++.........-..-+-+|++-|+.+++++....++|..+..++.......
T Consensus 458 i~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~ 520 (571)
T KOG1237|consen 458 ILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFS 520 (571)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456778889999999999998888889999999999999999999999999999888665443
No 322
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=49.82 E-value=6.6 Score=36.78 Aligned_cols=20 Identities=15% Similarity=0.001 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 012159 376 WVSILPPLASVLVTSIAAQF 395 (470)
Q Consensus 376 ~~~~~~~~~~~~~~~~~g~l 395 (470)
.++..++++-.+|+.+.++.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~ 205 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWP 205 (309)
T ss_dssp --------------------
T ss_pred HHHHHHHHHHHhcchhccee
Confidence 45778899999999988875
No 323
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=49.51 E-value=1.7e+02 Score=25.01 Aligned_cols=57 Identities=21% Similarity=0.287 Sum_probs=31.1
Q ss_pred CchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhhhcccCchHHHHHHHH
Q 012159 219 VSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGL 277 (470)
Q Consensus 219 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~ 277 (470)
.-.....+++.+..|+++|.++.-+--.+..+-..+.-.++.++.+. |.|..++.|+
T Consensus 12 ~DN~~vi~~~~~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~--~~~i~~igG~ 68 (183)
T PF03741_consen 12 IDNAFVIAMIFRKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLLSI--FPWILLIGGL 68 (183)
T ss_pred hhHHHHHHHHHhCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 33445566677778887776655443333334444444556666654 3444444443
No 324
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=48.22 E-value=26 Score=28.67 Aligned_cols=48 Identities=17% Similarity=0.191 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHH
Q 012159 204 PGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVA 254 (470)
Q Consensus 204 ~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 254 (470)
..+++..++.|+|. ..+.+.+++..+++++-|..+|+-..-.+++-+.
T Consensus 98 ~~~~~S~~~Fg~gl---lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 98 AVLLVSLVFFGLGL---LGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred HHHHHHHHHHHHHH---HhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 34444444444443 3456778888888888999999988877776543
No 325
>PRK02237 hypothetical protein; Provisional
Probab=47.78 E-value=57 Score=24.80 Aligned_cols=48 Identities=17% Similarity=0.124 Sum_probs=38.9
Q ss_pred hhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHH
Q 012159 149 SVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (470)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 196 (470)
...|-+.+.|.-.+++.++++++..|+..+-+.=.++..+..++..++
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHh
Confidence 447889999999999999999999999988777777766666665444
No 326
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=46.81 E-value=2.4e+02 Score=26.15 Aligned_cols=151 Identities=15% Similarity=0.157 Sum_probs=70.0
Q ss_pred HHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhh---hcCcHHHHHHHHHHHHHHH
Q 012159 118 TTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI---FGGRKVLQTGVLIWSLATA 194 (470)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr---~g~r~~~~~~~~~~~~~~~ 194 (470)
.+...+++.-+..+..+.-+..+.+..+......++..+...... +.+-.++ ||.+|.=+++.+..++..+
T Consensus 29 ~L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~al~lal~A~~~------a~r~~~~~~TfGy~R~eiLaa~~nav~Li 102 (296)
T COG1230 29 LLNLAFMLIEIIGGLLTGSLALLADALHMLSDALALLLALIAIKL------ARRPATKRFTFGYKRLEILAAFLNALLLI 102 (296)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHhHHHHHHHHHHHHHHHHHHHH------hcCCCCCCCCccHhHHHHHHHHHHHHHHH
Confidence 334444444455555555566777878876666666554443322 2222222 6777766666555554443
Q ss_pred HHHHhh--hHH----------HHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhh
Q 012159 195 LLPLLA--GFM----------PGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI 262 (470)
Q Consensus 195 ~~~~~~--~~~----------~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 262 (470)
..+.+. ... ...++.-.+.|+.... .+.-++.+- ..+.....-+......-.-+-+|-++++.+
T Consensus 103 ~~s~~I~~EAi~R~~~P~~i~~~~ml~va~~GL~vN~---~~a~ll~~~-~~~~lN~r~a~LHvl~D~Lgsv~vIia~i~ 178 (296)
T COG1230 103 VVSLLILWEAIQRLLAPPPIHYSGMLVVAIIGLVVNL---VSALLLHKG-HEENLNMRGAYLHVLGDALGSVGVIIAAIV 178 (296)
T ss_pred HHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHH---HHHHHhhCC-CcccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332211 000 0112222223332211 111111111 222344444444454444445556667777
Q ss_pred hcccCchHHHHHHHHH
Q 012159 263 IENLGWESVFYIFGLL 278 (470)
Q Consensus 263 ~~~~g~~~~~~~~~~~ 278 (470)
...+||.|.=-+.+++
T Consensus 179 i~~~~w~~~Dpi~si~ 194 (296)
T COG1230 179 IRFTGWSWLDPILSIV 194 (296)
T ss_pred HHHhCCCccchHHHHH
Confidence 7777888754444443
No 327
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=46.15 E-value=1e+02 Score=31.38 Aligned_cols=72 Identities=15% Similarity=0.210 Sum_probs=43.2
Q ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 012159 330 KAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELS-LNLTEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (470)
Q Consensus 330 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g-~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~ 403 (470)
.+++|.|+- ...+..+........+.......+. ..| +++..-|.+....-+..++...++|+.+-|+-+.-
T Consensus 252 gDVFR~P~~-~~lls~lvG~G~Qll~~~~~~~~~a-~~g~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk~~ 324 (521)
T PF02990_consen 252 GDVFRPPKH-PMLLSALVGTGIQLLFMALVTLFFA-ALGFLSPNNRGSLLTAAIILYALTSFIAGYVSARLYKSF 324 (521)
T ss_pred HHHhcCcCC-chHHHhHhcchhhhhHHHHHHHHHH-HhhhccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHc
Confidence 467776652 2222333333333333333333333 334 45666677888888899999999999999987664
No 328
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=44.71 E-value=47 Score=32.37 Aligned_cols=26 Identities=15% Similarity=0.064 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCc
Q 012159 380 LPPLASVLVTSIAAQFADNLIATGVE 405 (470)
Q Consensus 380 ~~~~~~~~~~~~~g~l~dr~~~~~~~ 405 (470)
++.+.+-+....+|-+-.|.|.|+..
T Consensus 335 vYAlTs~i~GY~~gs~Y~r~gG~~Wi 360 (593)
T KOG1277|consen 335 VYALTSPINGYVSGSFYARLGGRRWI 360 (593)
T ss_pred HHHhcccccccccceeeehhccHHHH
Confidence 34444444445555556677766543
No 329
>PF01864 DUF46: Putative integral membrane protein DUF46; InterPro: IPR002726 This archaebacterial protein has no known function. It contains several predicted transmembrane regions, suggesting it is an integral membrane protein.
Probab=43.50 E-value=1.2e+02 Score=25.57 Aligned_cols=53 Identities=15% Similarity=0.117 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHhhhhHHHHHHHHHHHhhccC
Q 012159 377 VSILPPLASVLVTSIAAQFADNLIATGVETTMGITNTVGAVPGIVGVALTGYLLDST 433 (470)
Q Consensus 377 ~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~g~~~~~~~~~~~ig~~~~g~l~~~~ 433 (470)
.....++++++|=+...++=.|++.++-... -..=.+-.++++++..++....
T Consensus 90 ~g~ll~~gamlGDl~~SFIKRRlgi~~G~~a----p~lDQldf~lgall~~~~~~~~ 142 (175)
T PF01864_consen 90 LGFLLGLGAMLGDLPGSFIKRRLGIPRGAPA----PGLDQLDFVLGALLLLYLFAPL 142 (175)
T ss_pred HHHHHHHHHHHhHHHHHHHHHhcCCCCCCcC----ccchhHHHHHHHHHHHHHHHhC
Confidence 3445667777777888888888876653332 2233445556666665555443
No 330
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=42.49 E-value=1.2e+02 Score=23.01 Aligned_cols=18 Identities=17% Similarity=0.220 Sum_probs=8.5
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 012159 382 PLASVLVTSIAAQFADNL 399 (470)
Q Consensus 382 ~~~~~~~~~~~g~l~dr~ 399 (470)
.+.+++.....||+.||+
T Consensus 52 fIsGilVGa~iG~llD~~ 69 (116)
T COG5336 52 FISGILVGAGIGWLLDKF 69 (116)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 344444444445555554
No 331
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=42.45 E-value=1.4e+02 Score=26.66 Aligned_cols=53 Identities=17% Similarity=0.000 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHHHhCCCc--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 012159 350 WGHYTCLSWLPTYFSEELSLNL--TEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (470)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~g~s~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~ 403 (470)
..........+.+..+ .+.+. ...++......+...++.++.|.+.||.|+|+
T Consensus 16 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~ 70 (338)
T COG0477 16 LDLGLLSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRK 70 (338)
T ss_pred HhcchHHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchH
Confidence 3334444556666654 34444 46788888899999999999999999997773
No 332
>PTZ00370 STEVOR; Provisional
Probab=40.48 E-value=45 Score=30.27 Aligned_cols=27 Identities=7% Similarity=0.075 Sum_probs=14.3
Q ss_pred cCchHHHHHHHHHHHHHHHHHHhhccC
Q 012159 266 LGWESVFYIFGLLGIAWFSGFKILQEG 292 (470)
Q Consensus 266 ~g~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (470)
..|..+-++..+++++.+++..|+.++
T Consensus 255 ~Pygiaalvllil~vvliilYiwlyrr 281 (296)
T PTZ00370 255 YPYGIAALVLLILAVVLIILYIWLYRR 281 (296)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345555555555555555555555443
No 333
>PF08566 Pam17: Mitochondrial import protein Pam17; InterPro: IPR013875 The presequence translocase-associated motor (PAM) drives the completion of preprotein translocation into the mitochondrial matrix. The Pam17 subunit is required for formation of a stable complex between cochaperones Pam16 and Pam18 and promotes the association of Pam16-Pam18 with the presequence translocase []. Mitochondria lacking Pam17 are selectively impaired in the import of matrix proteins [].
Probab=39.98 E-value=1.2e+02 Score=25.38 Aligned_cols=31 Identities=10% Similarity=0.058 Sum_probs=14.2
Q ss_pred hhhcCCCchhh--HHHHHHHHHHHHHhhhhhHH
Q 012159 141 SHRFGWNSSVA--GLVQSSFFWGYALSQLPGGW 171 (470)
Q Consensus 141 ~~~~g~s~~~~--~~~~~~~~~~~~~~~~~~g~ 171 (470)
..-+|+++..+ ...+++..+|+++|..++..
T Consensus 69 ~~I~GlDP~~~~g~~t~a~g~lG~L~GP~~G~~ 101 (173)
T PF08566_consen 69 QQIMGLDPFMVYGLATLACGALGWLVGPSLGNQ 101 (173)
T ss_pred ccccCcCHHHHHHHHHHHHHHHHHHhcchHHHH
Confidence 33457776542 22333444444444444433
No 334
>PRK15015 carbon starvation protein A; Provisional
Probab=39.93 E-value=4.6e+02 Score=27.43 Aligned_cols=104 Identities=14% Similarity=0.144 Sum_probs=49.0
Q ss_pred HHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHh-hhccCccch
Q 012159 159 FWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLI-ARSIPLEER 237 (470)
Q Consensus 159 ~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i-~~~~~~~~r 237 (470)
.+...++..-+|.++-+.|..---+. .++.+++..+. .-.++.-.+.+=+.+.=-.-..|+..-.= .|+.| .+|
T Consensus 11 ~~~a~~ga~~~~~~al~rge~mnal~-lv~aa~~~y~i---aYrfYgr~ia~kv~~lD~~r~TPA~~~~DG~DYvP-t~k 85 (701)
T PRK15015 11 TVLSVMGAFALGYIALNRGEQINALW-IVVASVCIYLI---AYRFYGLYIAKNVLAVDPTRMTPAVRHNDGLDYVP-TDK 85 (701)
T ss_pred HHHHHHHHHHheeeeecCCCchhHHH-HHHHHHHHHHH---HHHHHHHHHHHHhccCCCCCCCCceECCCCCCcCc-CCc
Confidence 34445666667777666665421111 11111221111 11223333444444554333333322221 24455 556
Q ss_pred hhHHHH-HHhhhhhHHHHHHhhHHhhhcccCchHH
Q 012159 238 SRAVSF-VFGGLSFGSVAGLLLAPPIIENLGWESV 271 (470)
Q Consensus 238 ~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~g~~~~ 271 (470)
-..+|- +.+..+.|.++||.++. .+||-..
T Consensus 86 ~VLfGHHFasIAGAGPivGPvlAa----~~GwlP~ 116 (701)
T PRK15015 86 KVLFGHHFAAIAGAGPLVGPVLAA----QMGYLPG 116 (701)
T ss_pred cchhHHHHHHHhccCccHHHHHHH----HHcchHH
Confidence 677776 45556677777777665 4687633
No 335
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=39.26 E-value=6.6e+02 Score=29.63 Aligned_cols=138 Identities=13% Similarity=0.140 Sum_probs=0.0
Q ss_pred hhhccC--CCCCHHHHhc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCchhhHHHHHHHHHHHHHHH
Q 012159 319 EMGESL--KDVPWKAIFR--SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELS-----LNLTEAAWVSILPPLASVLVT 389 (470)
Q Consensus 319 ~~~~~~--~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g-----~s~~~~~~~~~~~~~~~~~~~ 389 (470)
+...+. ...++..+|+ .+.-+..++..+++...........|.++..... -......+.+.+..++..+..
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~~~~~~~~~~~~~~~i~~~~~~ 114 (1466)
T PTZ00265 35 ELYKKIKTQKIPFFLPFKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLGENVNDIIFSLVLIGIFQFILS 114 (1466)
T ss_pred ccccccccccccHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHhcCCcch------------------------------------HHHHHHhhhhHHHHHHHHHHHhhccC
Q 012159 390 SIAAQFADNLIATGVETT------------------------------------MGITNTVGAVPGIVGVALTGYLLDST 433 (470)
Q Consensus 390 ~~~g~l~dr~~~~~~~~~------------------------------------~g~~~~~~~~~~~ig~~~~g~l~~~~ 433 (470)
.+..++..+.+.+-...+ .++...+..+...+..++++++....
T Consensus 115 ~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~ 194 (1466)
T PTZ00265 115 FISSFCMDVVTTKILKTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLF 194 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred CceehhhHHHHHHHHHHHHHHHh
Q 012159 434 HSWSMSLFAPSIFFYLTGTIVWL 456 (470)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~ 456 (470)
-.|.+.+++++++.+......+.
T Consensus 195 ~sw~Lalv~l~~~pl~~~~~~~~ 217 (1466)
T PTZ00265 195 KNARLTLCITCVFPLIYICGVIC 217 (1466)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHH
No 336
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=38.02 E-value=1.6e+02 Score=22.21 Aligned_cols=28 Identities=14% Similarity=0.070 Sum_probs=14.9
Q ss_pred HhhhhhHHHhh-hhcCcHHHHHHHHHHHH
Q 012159 164 LSQLPGGWLAK-IFGGRKVLQTGVLIWSL 191 (470)
Q Consensus 164 ~~~~~~g~l~d-r~g~r~~~~~~~~~~~~ 191 (470)
+...+.|.+.| +++-++.+.+.+++.++
T Consensus 57 l~G~~lG~WLD~~~~t~~~~tl~~lllGv 85 (100)
T TIGR02230 57 LLGVAVGIWLDRHYPSPFSWTLTMLIVGV 85 (100)
T ss_pred HHHHHHHHHHHhhcCCCcHHHHHHHHHHH
Confidence 34445566666 46665555554444443
No 337
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=37.59 E-value=1.8e+02 Score=22.02 Aligned_cols=29 Identities=14% Similarity=0.350 Sum_probs=14.1
Q ss_pred hHHHHHHhhHHhhhcccC----chHHHHHHHHH
Q 012159 250 FGSVAGLLLAPPIIENLG----WESVFYIFGLL 278 (470)
Q Consensus 250 ~g~~~g~~~~~~l~~~~g----~~~~~~~~~~~ 278 (470)
+..++|..+|-++=.+++ |..+|++.|++
T Consensus 54 ~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv~ 86 (100)
T TIGR02230 54 IPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGVV 86 (100)
T ss_pred HHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 344455555555555555 33444444443
No 338
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=37.32 E-value=4.2e+02 Score=26.18 Aligned_cols=74 Identities=12% Similarity=0.123 Sum_probs=32.7
Q ss_pred hhhhHHHhhhhcCcHHHHHHHHHHHHHHHHH----HHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhHH
Q 012159 166 QLPGGWLAKIFGGRKVLQTGVLIWSLATALL----PLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAV 241 (470)
Q Consensus 166 ~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 241 (470)
.+..=.+.+.+.++++-.+-.++.+++.+++ ..++.. ..+..+..+...+ +......++......++|+..+
T Consensus 308 TF~~fflfE~~~~~~iHpiQY~LVGlAl~lFYlLLLSlSEh-i~F~~AYliAa~a---~i~Li~~Y~~~vl~~~k~~~~~ 383 (430)
T PF06123_consen 308 TFLAFFLFELLSKLRIHPIQYLLVGLALVLFYLLLLSLSEH-IGFNLAYLIAALA---CIGLISLYLSSVLKSWKRGLIF 383 (430)
T ss_pred HHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhh-hchHHHHHHHHHH---HHHHHHHHHHHHHhcchHHHHH
Confidence 3334445565555555444333333332222 123333 2233333333322 2334455666666666666555
Q ss_pred HH
Q 012159 242 SF 243 (470)
Q Consensus 242 ~~ 243 (470)
+.
T Consensus 384 ~~ 385 (430)
T PF06123_consen 384 AG 385 (430)
T ss_pred HH
Confidence 43
No 339
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=37.22 E-value=48 Score=29.18 Aligned_cols=90 Identities=22% Similarity=0.248 Sum_probs=52.3
Q ss_pred hhHHHhhhhcCcH--------HHHHHHHHHHHHHHHHHH-hh-hHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccch
Q 012159 168 PGGWLAKIFGGRK--------VLQTGVLIWSLATALLPL-LA-GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEER 237 (470)
Q Consensus 168 ~~g~l~dr~g~r~--------~~~~~~~~~~~~~~~~~~-~~-~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r 237 (470)
=.+.+.||||-+- +++++.++-++..-+++- .. -.+..-.....-.|+|.+....+..+-+.+.+| +..
T Consensus 126 ~laiI~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~a~~~~fhP~ALAMasGvGSgSMMaAa~~aL~~~~P-~~a 204 (241)
T PF11299_consen 126 NLAIISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLLASLGIFHPYALAMASGVGSGSMMAAASGALAAAYP-EMA 204 (241)
T ss_pred ceeeeehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHHHhccCCCHHHHHHHcCCcHHHHHHHHHHHHHHHCc-chH
Confidence 3466788887532 344444333332222221 11 111223455566788888888888888888887 666
Q ss_pred hhHHHHHHhhhhhHHHHHHhh
Q 012159 238 SRAVSFVFGGLSFGSVAGLLL 258 (470)
Q Consensus 238 ~~~~~~~~~~~~~g~~~g~~~ 258 (470)
....++....+.+..+.|-.+
T Consensus 205 ~~i~A~AaaSNllt~~~G~Y~ 225 (241)
T PF11299_consen 205 DQILAFAAASNLLTSVTGLYM 225 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 677777666666655555443
No 340
>PF06638 Strabismus: Strabismus protein; InterPro: IPR009539 This family consists of several strabismus (STB) or Van Gogh-like (VANGL) proteins 1 and 2. The exact function of this family is unknown. It is thought, however that STB1 gene and STB2 may be potent tumour suppressor gene candidates [].; GO: 0007275 multicellular organismal development, 0016021 integral to membrane
Probab=36.57 E-value=4.2e+02 Score=26.52 Aligned_cols=13 Identities=15% Similarity=-0.292 Sum_probs=9.5
Q ss_pred hhHHHHHHHHHHH
Q 012159 200 AGFMPGLVLSRVL 212 (470)
Q Consensus 200 ~~~~~~l~~~~~l 212 (470)
.-.+|++++.|++
T Consensus 178 ~~syWLFY~vrIl 190 (505)
T PF06638_consen 178 LFSYWLFYGVRIL 190 (505)
T ss_pred HHHHHHHhhheee
Confidence 3446888888877
No 341
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=35.34 E-value=3.5e+02 Score=24.72 Aligned_cols=20 Identities=10% Similarity=0.122 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 012159 378 SILPPLASVLVTSIAAQFAD 397 (470)
Q Consensus 378 ~~~~~~~~~~~~~~~g~l~d 397 (470)
+.+..++.+++.++...+.+
T Consensus 168 ~lPqaiGm~i~a~i~~~~~~ 187 (269)
T PF06800_consen 168 FLPQAIGMLIGAFIFNLFSK 187 (269)
T ss_pred HHHHHHHHHHHHHHHhhccc
Confidence 34677778888777776553
No 342
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=35.28 E-value=18 Score=28.83 Aligned_cols=14 Identities=14% Similarity=0.251 Sum_probs=6.8
Q ss_pred hHHHHHHHHHHHHH
Q 012159 269 ESVFYIFGLLGIAW 282 (470)
Q Consensus 269 ~~~~~~~~~~~~~~ 282 (470)
||+++++.++++++
T Consensus 1 RW~l~~iii~~i~l 14 (130)
T PF12273_consen 1 RWVLFAIIIVAILL 14 (130)
T ss_pred CeeeHHHHHHHHHH
Confidence 45555554444333
No 343
>PF11990 DUF3487: Protein of unknown function (DUF3487); InterPro: IPR021877 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 121 to 136 amino acids in length. This protein has a conserved RLN sequence motif.
Probab=34.73 E-value=82 Score=24.75 Aligned_cols=29 Identities=17% Similarity=0.051 Sum_probs=14.1
Q ss_pred hCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 012159 367 LSLNLTEAAWVSILPPLASVLVTSIAAQF 395 (470)
Q Consensus 367 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l 395 (470)
.|++..+.++......+.+++..+...++
T Consensus 19 rGlT~~El~~~a~~~~~~g~~~gl~la~~ 47 (121)
T PF11990_consen 19 RGLTADELGLAAGVGFVAGLVVGLPLALL 47 (121)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666666555544444444444443333
No 344
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=34.18 E-value=3.1e+02 Score=23.68 Aligned_cols=32 Identities=31% Similarity=0.430 Sum_probs=24.3
Q ss_pred ccchhhHHHHHHhhhhhHHHHHHhhHHhhhcc
Q 012159 234 LEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN 265 (470)
Q Consensus 234 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 265 (470)
.++.+++.++.-.+..+|.++|.++..++...
T Consensus 136 ~~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~~ 167 (194)
T PF11833_consen 136 ERKLGRAFLWTLGGLVVGLILGSLLASWLPVD 167 (194)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 35668888888888888888888888777543
No 345
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=34.17 E-value=2.6e+02 Score=24.00 Aligned_cols=29 Identities=21% Similarity=0.044 Sum_probs=13.5
Q ss_pred HhhHHhhhcccCchHHHHHHHHHHHHHHH
Q 012159 256 LLLAPPIIENLGWESVFYIFGLLGIAWFS 284 (470)
Q Consensus 256 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ 284 (470)
+++++.......-.|..-..|.+.+...+
T Consensus 43 Sl~~~~~l~~ip~~wiLGlLGliPI~lGi 71 (191)
T PF03596_consen 43 SLLGAFGLLFIPPEWILGLLGLIPIYLGI 71 (191)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 34444444444445554555555544443
No 346
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=33.89 E-value=1.8e+02 Score=24.86 Aligned_cols=23 Identities=17% Similarity=0.381 Sum_probs=19.5
Q ss_pred HHHHHHHHHhhhhhHHHhhhhcC
Q 012159 156 SSFFWGYALSQLPGGWLAKIFGG 178 (470)
Q Consensus 156 ~~~~~~~~~~~~~~g~l~dr~g~ 178 (470)
.-|.+++.+...+.|++.||..+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Confidence 45677888999999999999885
No 347
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=33.31 E-value=48 Score=29.98 Aligned_cols=132 Identities=12% Similarity=0.133 Sum_probs=67.4
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHHHhhhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHH-hhhhc
Q 012159 100 ASYWPPWKNIPQRYKLIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWL-AKIFG 177 (470)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l-~dr~g 177 (470)
+..|..|... ....-+.+.+++.-+...+-..+++. +.++++.+.....++-.+..+.....+.+-.-+ -.+..
T Consensus 191 Rm~W~~WF~~----v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~~eipwngkr 266 (412)
T KOG4830|consen 191 RMHWTSWFGH----VQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVNSEIPWNGKR 266 (412)
T ss_pred cccchhhhhh----hHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhcccCCcCcce
Confidence 4455555432 22333344455555544545555665 556777777766666665555554443322211 11222
Q ss_pred CcHHHHHHHHHHHHHHHHHHHhhhHHH-HHHHHHHHHHhhccCchhhHHHHhhhccCcc
Q 012159 178 GRKVLQTGVLIWSLATALLPLLAGFMP-GLVLSRVLVGIGEGVSPSAATDLIARSIPLE 235 (470)
Q Consensus 178 ~r~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~ 235 (470)
.|.....|.+++..+...+.+....+. -+++..++.|++.+........+.++...++
T Consensus 267 lKayYsaGgiiwifcga~ilLlpr~i~symyAisvfIGIAnAimlvtslsitavli~~~ 325 (412)
T KOG4830|consen 267 LKAYYSAGGIIWIFCGAVILLLPRGIKSYMYAISVFIGIANAIMLVTSLSITAVLINKN 325 (412)
T ss_pred eeeeeecccHHHHHhhhheeecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 233334444444333333323343322 3445567789998888777777777766543
No 348
>COG2261 Predicted membrane protein [Function unknown]
Probab=32.87 E-value=1.9e+02 Score=20.87 Aligned_cols=47 Identities=30% Similarity=0.506 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcchHHHHHHhhhhHHHHHHHHHHHhhccC
Q 012159 383 LASVLVTSIAAQFADNLIATGVETTMGITNTVGAVPGIVGVALTGYLLDST 433 (470)
Q Consensus 383 ~~~~~~~~~~g~l~dr~~~~~~~~~~g~~~~~~~~~~~ig~~~~g~l~~~~ 433 (470)
+..++...+.|+++.++-+++.-. |++ ...+.+++|.++++++....
T Consensus 4 i~~IIiG~iaG~lA~~i~~g~~~~--G~~--~nIilGIVGA~vg~~l~~~~ 50 (82)
T COG2261 4 IAWIIIGLIAGWLAGKIMPGGGGG--GIF--MNIILGIVGAFVGGWLLGAL 50 (82)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCc--chH--HHHHHHHHHHHHHHHHHHHh
Confidence 345566677788888876642111 211 22233444555555554443
No 349
>PF13440 Polysacc_synt_3: Polysaccharide biosynthesis protein
Probab=32.78 E-value=3.4e+02 Score=23.76 Aligned_cols=33 Identities=21% Similarity=0.138 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHH
Q 012159 355 CLSWLPTYFSEELSLNLTEAAWVSILPPLASVLV 388 (470)
Q Consensus 355 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~ 388 (470)
.....+.++...+ +++++.|.......+...+.
T Consensus 201 ~~~~~~~~li~~~-l~~~~~g~y~~a~~l~~~~~ 233 (251)
T PF13440_consen 201 LLSQIDRLLIGYF-LGPEAVGIYSVAQRLASLPA 233 (251)
T ss_pred HHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHH
Confidence 4455566666542 37778887766665555444
No 350
>COG3619 Predicted membrane protein [Function unknown]
Probab=32.62 E-value=3.6e+02 Score=23.95 Aligned_cols=31 Identities=3% Similarity=0.022 Sum_probs=17.9
Q ss_pred chhhHHHHHHHHHHHHHhhhhhHHHhhhhcC
Q 012159 148 SSVAGLVQSSFFWGYALSQLPGGWLAKIFGG 178 (470)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~ 178 (470)
............+..+++......+..|..+
T Consensus 54 ~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 54 DAALAVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4444556666667777775555555555553
No 351
>PF01940 DUF92: Integral membrane protein DUF92; InterPro: IPR002794 Many members of this family have no known function and are predicted to be integral membrane proteins.; GO: 0016021 integral to membrane
Probab=31.61 E-value=3.7e+02 Score=23.84 Aligned_cols=11 Identities=9% Similarity=0.359 Sum_probs=6.0
Q ss_pred CCCHHHHhcCH
Q 012159 326 DVPWKAIFRSK 336 (470)
Q Consensus 326 ~~~~~~~~~~~ 336 (470)
.+++.+++-|-
T Consensus 75 ~R~~~QVlaNg 85 (226)
T PF01940_consen 75 RRDWWQVLANG 85 (226)
T ss_pred CCChHHhhhcc
Confidence 34456666553
No 352
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=31.17 E-value=2.4e+02 Score=21.55 Aligned_cols=51 Identities=20% Similarity=0.034 Sum_probs=29.6
Q ss_pred hhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhc
Q 012159 167 LPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGE 217 (470)
Q Consensus 167 ~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~ 217 (470)
-..=+.+|.+.|+...+...+.+++++.+++..-.+.+.=++..+-.|+|.
T Consensus 18 ~~~lK~s~gf~~~~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~ 68 (106)
T COG2076 18 TTLLKYSDGFTRLWPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGI 68 (106)
T ss_pred HHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHH
Confidence 344566777777777777766666666555544444444444444445553
No 353
>PRK11715 inner membrane protein; Provisional
Probab=29.69 E-value=5.7e+02 Score=25.36 Aligned_cols=75 Identities=12% Similarity=0.112 Sum_probs=33.8
Q ss_pred hhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHH----HhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhH
Q 012159 165 SQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP----LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRA 240 (470)
Q Consensus 165 ~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 240 (470)
..+.+=.+.+...++++-.+-.++.+++.+++. .++.. ..+..+..+...+ +......++.......+||..
T Consensus 313 LTF~~fFlfE~~~~~~iHpiQYlLVGlAl~lFYLLLLSlSEH-igF~~AYliAa~a---~v~li~~Y~~~vl~~~k~g~~ 388 (436)
T PRK11715 313 LTFAAFFLFELLKKLRIHPVQYLLVGLALVLFYLLLLSLSEH-IGFTLAYLIAALA---CVLLIGFYLSAVLRSWKRGLL 388 (436)
T ss_pred HHHHHHHHHHHhcCceecHHHHHHHHHHHHHHHHHHHHHHhh-hchHHHHHHHHHH---HHHHHHHHHHHHHhcchHHHH
Confidence 333344456666666554443333333332221 23333 2233333333322 223445566666666777766
Q ss_pred HHH
Q 012159 241 VSF 243 (470)
Q Consensus 241 ~~~ 243 (470)
++.
T Consensus 389 ~~~ 391 (436)
T PRK11715 389 FAA 391 (436)
T ss_pred HHH
Confidence 554
No 354
>TIGR03750 conj_TIGR03750 conjugative transfer region protein, TIGR03750 family. Members of this protein family are found occasionally on plasmids. Usually, however, they are found on the bacterial main chromosome in regions flanked by markers of conjugative transfer and/or transposition.
Probab=29.66 E-value=92 Score=23.99 Aligned_cols=10 Identities=20% Similarity=0.139 Sum_probs=4.2
Q ss_pred CCCchhhHHH
Q 012159 368 SLNLTEAAWV 377 (470)
Q Consensus 368 g~s~~~~~~~ 377 (470)
|++..+..+.
T Consensus 17 GlT~~El~~~ 26 (111)
T TIGR03750 17 GLTADELGVA 26 (111)
T ss_pred ccCHHHHHHH
Confidence 3444444433
No 355
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=29.29 E-value=7.3e+02 Score=26.52 Aligned_cols=27 Identities=4% Similarity=0.181 Sum_probs=13.9
Q ss_pred hcccCchHHHHHHHHHHHHHHHHHHhh
Q 012159 263 IENLGWESVFYIFGLLGIAWFSGFKIL 289 (470)
Q Consensus 263 ~~~~g~~~~~~~~~~~~~~~~~~~~~~ 289 (470)
.-.++|..++...+.+.+..++.+++.
T Consensus 288 m~~ys~~L~li~l~~~~l~~l~~~~~~ 314 (709)
T COG2274 288 MFLYSWKLTLIVLAAIPLNVLITLIFQ 314 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334567666666555544444444433
No 356
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=29.26 E-value=1.6e+02 Score=19.03 Aligned_cols=36 Identities=17% Similarity=0.061 Sum_probs=21.1
Q ss_pred HHHHHHHHhhhhhHHHhhh-hcCcHHHHHHHHHHHHH
Q 012159 157 SFFWGYALSQLPGGWLAKI-FGGRKVLQTGVLIWSLA 192 (470)
Q Consensus 157 ~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~ 192 (470)
...+..++.....|+..|+ ++.++...+..++.++.
T Consensus 8 ~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~~ 44 (55)
T PF09527_consen 8 FTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGIA 44 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 3444455566677777775 67766666555544443
No 357
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=28.81 E-value=3.4e+02 Score=26.94 Aligned_cols=66 Identities=9% Similarity=-0.034 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHhhhhhHHHhHHh-hhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHH
Q 012159 117 GTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTG 185 (470)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 185 (470)
..+.+-.++..+.... ..|. +...+|++.++...+.+.-.+...++.++--....+.|-|-....+
T Consensus 19 ~~lglQH~lamfg~~V---~VPlivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG 85 (451)
T COG2233 19 LLLGLQHLLAMFGATV---LVPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLG 85 (451)
T ss_pred HHHHHHHHHHHHhcch---HhhHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEe
Confidence 3444444444443332 3344 4567899999999999999999988888776644444444444333
No 358
>KOG2887 consensus Membrane protein involved in ER to Golgi transport [Intracellular trafficking, secretion, and vesicular transport]
Probab=28.42 E-value=3.6e+02 Score=22.66 Aligned_cols=63 Identities=14% Similarity=0.036 Sum_probs=31.2
Q ss_pred HHhhhhcCcHHH-HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhH
Q 012159 171 WLAKIFGGRKVL-QTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRA 240 (470)
Q Consensus 171 ~l~dr~g~r~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 240 (470)
.+..-+.++|.. .+..+...+..+..+....+...-++..+++.++. ..+.-.++|-.++|..
T Consensus 101 ql~~m~~p~Rl~~T~~~l~~~~~Tly~al~~ks~iLtllf~ilq~lal-------iwYslSyiP~g~~gv~ 164 (175)
T KOG2887|consen 101 QLKHMFSPERLPATLSYLATMVLTLYVALWLKSKILTLLFCILQVLAL-------IWYSLSYIPFGRSGVS 164 (175)
T ss_pred HHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHhCcchhhHHH
Confidence 333345554443 34444444555555455566455556666665542 2334445665555533
No 359
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=28.20 E-value=1.2e+02 Score=20.83 Aligned_cols=25 Identities=16% Similarity=0.234 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCC
Q 012159 441 FAPSIFFYLTGTIVWLAFASSKPQN 465 (470)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (470)
++++++.++.++++|.++.+.....
T Consensus 6 iLi~ICVaii~lIlY~iYnr~~~~q 30 (68)
T PF05961_consen 6 ILIIICVAIIGLILYGIYNRKKTTQ 30 (68)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccC
Confidence 3445566667777888887765543
No 360
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=27.76 E-value=2.3e+02 Score=23.17 Aligned_cols=25 Identities=24% Similarity=0.461 Sum_probs=20.4
Q ss_pred HHHHHHHHHhhhhhHHHhhhhcCcH
Q 012159 156 SSFFWGYALSQLPGGWLAKIFGGRK 180 (470)
Q Consensus 156 ~~~~~~~~~~~~~~g~l~dr~g~r~ 180 (470)
.-|.+++.+...+.|++.+|..+++
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccc
Confidence 3577788888999999999988763
No 361
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=27.56 E-value=4.9e+02 Score=24.00 Aligned_cols=56 Identities=13% Similarity=0.078 Sum_probs=31.1
Q ss_pred HHHHHHHHHhhccCchhhHHHHhhhccCccchhhHHHHHHhhhhhHHHHHHhhHHhh
Q 012159 206 LVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI 262 (470)
Q Consensus 206 l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 262 (470)
.-..|.+.|+-.-. +...++++.-.||++++--..--.....+++-++.|++|-.+
T Consensus 22 ~~~lr~~~g~~~vl-f~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l 77 (287)
T PF07760_consen 22 IPPLRVILGFPFVL-FLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLL 77 (287)
T ss_pred hhHHHHHHHHHHHH-HhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677777776533 355688888888855443222223333444445555554433
No 362
>COG5522 Predicted integral membrane protein [Function unknown]
Probab=27.23 E-value=4.2e+02 Score=23.03 Aligned_cols=24 Identities=17% Similarity=0.109 Sum_probs=14.8
Q ss_pred hhhhhHHHHHHhhHHhhhcccCch
Q 012159 246 GGLSFGSVAGLLLAPPIIENLGWE 269 (470)
Q Consensus 246 ~~~~~g~~~g~~~~~~l~~~~g~~ 269 (470)
...-+|.-+|..+-++..+.+.||
T Consensus 46 g~~lLg~~lg~~lw~~~~dg~tvr 69 (236)
T COG5522 46 GWVLLGATLGSNLWNFMPDGYTVR 69 (236)
T ss_pred HHHHHHHHHHHHHHhhccCceeHh
Confidence 344456666666667777666665
No 363
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=26.69 E-value=1.7e+02 Score=18.49 Aligned_cols=31 Identities=16% Similarity=0.186 Sum_probs=14.2
Q ss_pred HHHhhHHhhhccc----CchHHHHHHHHHHHHHHH
Q 012159 254 AGLLLAPPIIENL----GWESVFYIFGLLGIAWFS 284 (470)
Q Consensus 254 ~g~~~~~~l~~~~----g~~~~~~~~~~~~~~~~~ 284 (470)
+|.++++++.+.+ ++.+.-++.+++..+.++
T Consensus 6 iGa~vGg~l~~~lg~~~~~~~~~~i~aviGAiill 40 (48)
T PF04226_consen 6 IGAFVGGWLFGLLGINGGGSWGSFIVAVIGAIILL 40 (48)
T ss_pred HHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHH
Confidence 3444444444333 345555555555444433
No 364
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=26.52 E-value=3.4e+02 Score=27.55 Aligned_cols=32 Identities=16% Similarity=0.077 Sum_probs=17.4
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012159 369 LNLTEAAWVSILPPLASVLVTSIAAQFADNLI 400 (470)
Q Consensus 369 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~ 400 (470)
+++..=|-+++...+..++..+++|+.+-|+-
T Consensus 356 lSPs~RGsLmT~~~~l~v~~G~~agY~s~rly 387 (628)
T KOG1278|consen 356 LSPSSRGSLMTAMVLLFVFMGFVAGYVSARLY 387 (628)
T ss_pred CCccccccHHHHHHHHHHHHHHhhhhhhhhhH
Confidence 35555555555555555555555555555543
No 365
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=26.21 E-value=2e+02 Score=19.06 Aligned_cols=42 Identities=14% Similarity=0.196 Sum_probs=22.6
Q ss_pred hHHHHHHhhHHhhhcccCchHHHHHHHHHHHHHHHHHHhhcc
Q 012159 250 FGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQE 291 (470)
Q Consensus 250 ~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 291 (470)
+|.++|...+......+++....++..+++++...+...+++
T Consensus 13 l~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~~i~~ 54 (57)
T PF11151_consen 13 LGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIAVIPK 54 (57)
T ss_pred HHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHcCC
Confidence 444555444444334556666666666666655555544443
No 366
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=25.90 E-value=6.3e+02 Score=24.66 Aligned_cols=101 Identities=12% Similarity=0.083 Sum_probs=55.1
Q ss_pred HHhh-hhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Q 012159 137 IIPM-SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGI 215 (470)
Q Consensus 137 ~~~~-~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~ 215 (470)
.|.+ .+..|++.++...+.+...+...++.++-.+-.-++|.|..+..+.....+...........+.......++.|+
T Consensus 15 ~p~i~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~~~~~~~~ga~~v~Gi 94 (406)
T TIGR03173 15 VPLIVGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAGGGLGAIFGAVIVAGL 94 (406)
T ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 4443 344699998888888888888888888775333356766666554333222222211112233344444444454
Q ss_pred hccCchhhHHHHhhhccCccchh
Q 012159 216 GEGVSPSAATDLIARSIPLEERS 238 (470)
Q Consensus 216 ~~~~~~~~~~~~i~~~~~~~~r~ 238 (470)
..-... .....+.+.+|+.-.|
T Consensus 95 i~illg-~~~~~l~~~iPp~v~G 116 (406)
T TIGR03173 95 FVILLA-PFFSKLVRFFPPVVTG 116 (406)
T ss_pred HHHHHH-HHHHHHHHHCCcHHHH
Confidence 332222 2455677778765433
No 367
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=25.84 E-value=6.7e+02 Score=27.72 Aligned_cols=21 Identities=19% Similarity=0.275 Sum_probs=14.3
Q ss_pred HHHhHHhhhhhcCCCchhhHH
Q 012159 133 LSVAIIPMSHRFGWNSSVAGL 153 (470)
Q Consensus 133 ~~~~~~~~~~~~g~s~~~~~~ 153 (470)
+.+.+..+.+.++++...+|.
T Consensus 479 FVPSLe~IAekLgLSE~VAGa 499 (1096)
T TIGR00927 479 FVPALGVITDKLQISEDVAGA 499 (1096)
T ss_pred hHHHHHHHHHHhCCcHhhhhe
Confidence 344455577888888877765
No 368
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=25.36 E-value=4.5e+02 Score=22.79 Aligned_cols=28 Identities=21% Similarity=0.331 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012159 337 AVWAMIYAHFCGSWGHYTCLSWLPTYFS 364 (470)
Q Consensus 337 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 364 (470)
..|...+-..+..++.+.+...+..++.
T Consensus 77 ~~~~~~ld~~L~~~~if~~~~gi~~~f~ 104 (206)
T PF06570_consen 77 NPWLMALDNSLLFFGIFSLLFGIMGFFS 104 (206)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4565655555555555555444444444
No 369
>COG1079 Uncharacterized ABC-type transport system, permease component [General function prediction only]
Probab=25.14 E-value=5.7e+02 Score=23.88 Aligned_cols=97 Identities=12% Similarity=0.076 Sum_probs=54.8
Q ss_pred HHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHH-HHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhhhccCccchhhH
Q 012159 162 YALSQLPGGWLAKIFGGRKVLQTGVLIWSLATA-LLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRA 240 (470)
Q Consensus 162 ~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 240 (470)
-.+..-+++.++||-|.-.+-+=+..+++.... +......+.|.-++...+.| .......++++.....++--..
T Consensus 20 PLllaaLG~l~sERsGVlNIglEG~M~~gAf~~~~~~~~t~spw~gl~~a~l~g----~l~~ll~a~~ti~l~~nqiisG 95 (304)
T COG1079 20 PLLLAALGGLFSERSGVLNIGLEGIMLLGAFSGALFAYGTGSPWLGLLAAALVG----ALFGLLHAFLTIKLRANQIISG 95 (304)
T ss_pred HHHHHHHHHHHHHHhceeeechhhHHHHHHHHHHHHHHccccHHHHHHHHHHHH----HHHHHHHHHHHHhhccccchhH
Confidence 334555678889997765543333333222221 11222344444444444444 4445566777777767777777
Q ss_pred HHHHHhhhhhHHHHHHhhHHhh
Q 012159 241 VSFVFGGLSFGSVAGLLLAPPI 262 (470)
Q Consensus 241 ~~~~~~~~~~g~~~g~~~~~~l 262 (470)
.++.-.+.++...++....+.-
T Consensus 96 ~alnl~a~Glt~fl~~~~~~~~ 117 (304)
T COG1079 96 LALNLLASGLTAFLGQSIFGQP 117 (304)
T ss_pred HHHHHHHHHHHHHHHHHHhccC
Confidence 7887777777777666555543
No 370
>PHA03049 IMV membrane protein; Provisional
Probab=24.95 E-value=1.6e+02 Score=20.11 Aligned_cols=25 Identities=16% Similarity=0.246 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCC
Q 012159 441 FAPSIFFYLTGTIVWLAFASSKPQN 465 (470)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (470)
+++.++.++.++++|.++.+.....
T Consensus 6 ~l~iICVaIi~lIvYgiYnkk~~~q 30 (68)
T PHA03049 6 ILVIICVVIIGLIVYGIYNKKTTTS 30 (68)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccC
Confidence 3444556677778888887765443
No 371
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter. All members of the seed alignment for this model are asparate-alanine anti-transporters (AspT) encoded next to the gene for aspartate 4-decarboxylase (AspD), which converts asparate to alanine, releasing CO2. The exchange of Asp for Ala is electrogenic, so the AspD/AspT system confers a proton-motive force. This transporter contains two copies of the AspT/YidE/YbjL antiporter duplication domain (TIGR01625).
Probab=24.46 E-value=6.9e+02 Score=25.79 Aligned_cols=83 Identities=12% Similarity=0.082 Sum_probs=40.5
Q ss_pred hhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhh
Q 012159 150 VAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIA 229 (470)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~ 229 (470)
+.|+..-++.+|...+.-+..-+.+ .|-+..+ ++.++..+..++..+....+.-+=....+-.++.+...++..+...
T Consensus 451 ~~GL~lFla~vG~~aG~~f~~~l~~-~G~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~~t~t~~l~~a~ 528 (562)
T TIGR03802 451 DLGLALFIAVVGLSAGPQAVTAIKE-MGLTLFL-LGIVVTILPLIITMLIGKYVLKYDPALLLGALAGARTATPALGAVL 528 (562)
T ss_pred HHhHHHHHHHHHHhhhHHHHHHHHH-hhHHHHH-HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhccCCCcHHHHHHH
Confidence 4677777777777777766666643 5544433 3333333333222122211111111222223344455666667777
Q ss_pred hccCc
Q 012159 230 RSIPL 234 (470)
Q Consensus 230 ~~~~~ 234 (470)
+..+.
T Consensus 529 ~~~~~ 533 (562)
T TIGR03802 529 ERAGS 533 (562)
T ss_pred HhcCC
Confidence 76643
No 372
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=23.97 E-value=7.6e+02 Score=24.94 Aligned_cols=81 Identities=16% Similarity=0.066 Sum_probs=58.3
Q ss_pred HHHHHHHHHhhccCchhhHHHHhhhccCc-cchhhHHHHHHhhhhhH-HHHHHhhHHhhhcccCchHHHHHHHHHHHHHH
Q 012159 206 LVLSRVLVGIGEGVSPSAATDLIARSIPL-EERSRAVSFVFGGLSFG-SVAGLLLAPPIIENLGWESVFYIFGLLGIAWF 283 (470)
Q Consensus 206 l~~~~~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g-~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 283 (470)
+.+.-+..|++.......--+-+.+.+|. +++...+|-++...++- .++.-.+++-+.+..||-+.-.+.-++.++..
T Consensus 287 ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~litg 366 (509)
T COG3202 287 IALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLITG 366 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 44555666777777777777777887754 35788888888877777 66667788888889999887777666665554
Q ss_pred HHH
Q 012159 284 SGF 286 (470)
Q Consensus 284 ~~~ 286 (470)
+.+
T Consensus 367 ~lF 369 (509)
T COG3202 367 VLF 369 (509)
T ss_pred HHH
Confidence 433
No 373
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=23.21 E-value=3.1e+02 Score=20.15 Aligned_cols=42 Identities=10% Similarity=0.172 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHH
Q 012159 336 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWV 377 (470)
Q Consensus 336 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~ 377 (470)
+..+.+.+..+..++++.....+.|..+.....-+....|+.
T Consensus 16 r~~~~l~~i~l~~y~~~~ll~a~~p~~m~~~v~~G~~t~g~~ 57 (91)
T PF04341_consen 16 RLAWPLSAIFLVLYFGFVLLSAFAPELMATPVFPGSLTLGIV 57 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCHHHHcCcccCCCcCHHHH
Confidence 445667777777788888888888888865433223344443
No 374
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=22.79 E-value=2.5e+02 Score=27.66 Aligned_cols=24 Identities=25% Similarity=0.349 Sum_probs=16.4
Q ss_pred hHHHHHHHHHHHHHhhhhhHHHhh
Q 012159 151 AGLVQSSFFWGYALSQLPGGWLAK 174 (470)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~g~l~d 174 (470)
-|-+.+...+.+++.+++.|+.+.
T Consensus 325 rGal~saaI~vYAlTs~i~GY~~g 348 (593)
T KOG1277|consen 325 RGALLSAAIVVYALTSPINGYVSG 348 (593)
T ss_pred chHHHHHHHHHHHhcccccccccc
Confidence 466667777777777777776654
No 375
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=22.42 E-value=4.9e+02 Score=23.58 Aligned_cols=13 Identities=23% Similarity=0.089 Sum_probs=5.7
Q ss_pred CCCchhhHHHHHH
Q 012159 145 GWNSSVAGLVQSS 157 (470)
Q Consensus 145 g~s~~~~~~~~~~ 157 (470)
+.+......+++-
T Consensus 214 ~as~~~ldYvFs~ 226 (254)
T PF07857_consen 214 GASQNGLDYVFSH 226 (254)
T ss_pred CCCCcchheeHHH
Confidence 3444444444443
No 376
>KOG2262 consensus Sexual differentiation process protein ISP4 [Signal transduction mechanisms]
Probab=22.00 E-value=2.8e+02 Score=28.87 Aligned_cols=15 Identities=40% Similarity=0.452 Sum_probs=8.0
Q ss_pred HHHHHHHHHhhccCc
Q 012159 206 LVLSRVLVGIGEGVS 220 (470)
Q Consensus 206 l~~~~~l~G~~~~~~ 220 (470)
+.+.-=+.|.|.++.
T Consensus 186 l~lttQ~lGyGwAGl 200 (761)
T KOG2262|consen 186 LVLTTQLLGYGWAGL 200 (761)
T ss_pred HHHHHHHhcccHhhh
Confidence 344444567766643
No 377
>PRK03818 putative transporter; Validated
Probab=21.69 E-value=8e+02 Score=25.26 Aligned_cols=81 Identities=14% Similarity=0.017 Sum_probs=37.0
Q ss_pred hhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchhhHHHHhh
Q 012159 150 VAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIA 229 (470)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~ 229 (470)
+.|+..-++.+|...+.-+..-+.+..|.+..+ ++.++..+..++.........-+=..+.+-.++.+...++..+.+.
T Consensus 436 ~~GL~lFla~vGl~aG~~f~~~~~~~~G~~~~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~~t~tp~l~~a~ 514 (552)
T PRK03818 436 ELGIVLFLAVVGLKSGGDFVDTLVNGEGLSWIG-YGFLITAVPLLIVGILARMLAKMNYLTLCGMLAGSMTDPPALAFAN 514 (552)
T ss_pred HHhHHHHHHHHHhhhhHHHHHHHhccchHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhccCCCcHHHHHHh
Confidence 456666666666666665555554444544433 3333333322222222122111112233333444555566667777
Q ss_pred hc
Q 012159 230 RS 231 (470)
Q Consensus 230 ~~ 231 (470)
+.
T Consensus 515 ~~ 516 (552)
T PRK03818 515 NL 516 (552)
T ss_pred cc
Confidence 64
No 378
>PF05232 BTP: Bacterial Transmembrane Pair family; InterPro: IPR007896 This domain represents a conserved pair of transmembrane helices. It appears to be found as two tandem repeats in a family of hypothetical proteins.
Probab=21.59 E-value=2.8e+02 Score=19.07 Aligned_cols=46 Identities=13% Similarity=0.089 Sum_probs=36.7
Q ss_pred HHhHHhhhhhcCCCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCc
Q 012159 134 SVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGR 179 (470)
Q Consensus 134 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r 179 (470)
....|.+.--+|.+..+.+.+.....+...+-..+..++-||+-+|
T Consensus 19 ~~~~P~~a~~~~~~~~~a~~l~v~~s~~a~~wn~ifN~~FD~~~~r 64 (67)
T PF05232_consen 19 LISVPLIAWWLGISLWQAGALDVGLSLFAMVWNYIFNWLFDKIEPR 64 (67)
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3445556666788889999888888888899999999999997554
No 379
>TIGR00267 conserved hypothetical protein TIGR00267. This family is represented in three of the first four completed archaeal genomes, with two members in A. fulgidus.
Probab=21.40 E-value=4.9e+02 Score=21.79 Aligned_cols=26 Identities=4% Similarity=0.124 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcc
Q 012159 381 PPLASVLVTSIAAQFADNLIATGVET 406 (470)
Q Consensus 381 ~~~~~~~~~~~~g~l~dr~~~~~~~~ 406 (470)
..+...+.-++.|++.-|++.++...
T Consensus 122 s~~~~~~~L~ilG~~~a~~s~~~~~~ 147 (169)
T TIGR00267 122 TVLLTLIALLVLGVYLGRISRENILI 147 (169)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 44455556666788888887766443
No 380
>PTZ00101 rhomboid-1 protease; Provisional
Probab=20.69 E-value=6.7e+02 Score=23.09 Aligned_cols=31 Identities=19% Similarity=0.149 Sum_probs=19.3
Q ss_pred HHHHHHHhhhhhHHHhhh-hcCcHHHHHHHHH
Q 012159 158 FFWGYALSQLPGGWLAKI-FGGRKVLQTGVLI 188 (470)
Q Consensus 158 ~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~ 188 (470)
..+..++.....|...+| +|+++..++-.+.
T Consensus 117 HLl~Nm~~l~~~G~~lE~~~G~~r~~ilYl~s 148 (278)
T PTZ00101 117 HTFFNVFFQLRMGFTLEKNYGIVKIIILYFLT 148 (278)
T ss_pred HHHHHHHHHHHHHHHHHHHHChHHHHHHHHHH
Confidence 345555666667776665 7888877544333
No 381
>PF13073 DUF3937: Protein of unknown function (DUF3937)
Probab=20.64 E-value=2.6e+02 Score=18.84 Aligned_cols=38 Identities=13% Similarity=0.140 Sum_probs=22.5
Q ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 012159 333 FRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLN 370 (470)
Q Consensus 333 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~s 370 (470)
++|++...+.+..+.+.........++..|++..-|..
T Consensus 2 f~nkklir~gltlfv~L~vi~FtigYfq~Yl~saagi~ 39 (73)
T PF13073_consen 2 FTNKKLIRFGLTLFVFLSVIDFTIGYFQTYLESAAGIK 39 (73)
T ss_pred CccchhhhhhhHHHHHHHHHHhhHHHHHHHHHhccCCe
Confidence 45666666655555554444555667777777655543
No 382
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism]
Probab=20.23 E-value=2.8e+02 Score=26.73 Aligned_cols=42 Identities=17% Similarity=0.176 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHhHHhhhhhcCCCchhhHHH
Q 012159 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLV 154 (470)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~ 154 (470)
|.-+..+....++..+......-.+-...++++++..-+|++
T Consensus 289 ~ss~~~L~~~T~~vsllaeyLV~~Id~~~ds~~ls~~Figli 330 (441)
T KOG1397|consen 289 WSSIIWLLIMTLLVSLLAEYLVDTIDDVSDSWGLSVKFIGLI 330 (441)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhheee
Confidence 444444444444444444444445566778888888877654
No 383
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=20.09 E-value=2.8e+02 Score=26.38 Aligned_cols=44 Identities=25% Similarity=0.279 Sum_probs=38.1
Q ss_pred CCchhhHHHHHHHHHHHHHhhhhhHHHhhhhcCcHHHHHHHHHH
Q 012159 146 WNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIW 189 (470)
Q Consensus 146 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 189 (470)
+.-..+|..+.++.++..+.+.+.|.+..++||-.....+.+.-
T Consensus 307 ~Gv~~igf~m~cfgv~~Av~S~~~g~L~~~~gr~~~~v~gavv~ 350 (390)
T KOG3097|consen 307 LGVSRIGFAMACFGVGDAVASSLFGLLGKWIGRPPLLVLGAVVH 350 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHH
Confidence 45677899999999999999999999999999998888776543
Done!