BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>012161
MSPKGPEDVEVDIVKFTTDGEIRLTEAEDPDATEYSSSFGNTEPDTERCSGLSEVEVESQ
YFDVNGLRTNCDSFGRLFQMRKKKLTNHWRSFIRPLMWRCKWAELRINEIQSQALKYARE
LAAYDQNKLSRVNQSTVEEFGSKSLAFSSQWYRKKAMKRRKRKRAEDTTDLASYMSHHSL
FSYLENKRSNPDGNSTADDFGNTVIMDQPADCNDKFGSNEDALFFELKDDDSSLEQVLLK
IETVHSRVHQLKSQLDIVMAKNASRFSSSENLSLLAPCDGQTSSAPSPTFSAGNADTTSI
GAIYNPTQHISEYDIGDLVLPESAISSYAETIHVPDIIESTVGLLSAADVTFHQPQIGDS
CEDILDNILIQNDGAEGEQHTFLGTSNQSIEKHNDPEKGEEGESTNPSPIPASEPDPVAK
SEVAQDQSTLKSCLASDINFPRNKRKRGERKAGPGSSWSKKGSGEPDSQ

High Scoring Gene Products

Symbol, full name Information P value
AT3G59670 protein from Arabidopsis thaliana 2.9e-103
AT4G37440 protein from Arabidopsis thaliana 1.5e-33
AT3G50040 protein from Arabidopsis thaliana 3.9e-28

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  012161
        (469 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2097448 - symbol:AT3G59670 species:3702 "Arabi...  1023  2.9e-103  1
TAIR|locus:2126407 - symbol:AT4G37440 species:3702 "Arabi...   365  1.5e-33   1
TAIR|locus:2083083 - symbol:AT3G50040 "AT3G50040" species...   314  3.9e-28   1


>TAIR|locus:2097448 [details] [associations]
            symbol:AT3G59670 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0009165 "nucleotide
            biosynthetic process" evidence=RCA] EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AK221528 EMBL:AK229782
            IPI:IPI00533389 RefSeq:NP_191526.2 UniGene:At.50292
            EnsemblPlants:AT3G59670.1 GeneID:825136 KEGG:ath:AT3G59670
            TAIR:At3g59670 eggNOG:NOG259108 HOGENOM:HOG000137358
            InParanoid:Q56XZ5 OMA:DIFESTM PhylomeDB:Q56XZ5
            ProtClustDB:CLSN2681590 Genevestigator:Q56XZ5 Uniprot:Q56XZ5
        Length = 517

 Score = 1023 (365.2 bits), Expect = 2.9e-103, P = 2.9e-103
 Identities = 236/466 (50%), Positives = 300/466 (64%)

Query:     2 SPKGPEDVEVDIVKFTTDGEIRLTEAEDPDATEYSSSFGNTEPDTERC--SGLS-EVEVE 58
             S  G E+++VDIV+  +D     T  EDP+ATEYSSSF +T  +       GL+ E EVE
Sbjct:    51 SVSGGEELDVDIVE--SDENKTSTTDEDPNATEYSSSFSDTASENAEMLLDGLTGEAEVE 108

Query:    59 SQYFDVNGLRTNCDSFGRLFQMRKKKLTNHWRSFIRPLMWRCKWAELRINEIQSQALKYA 118
             S Y+D   L    DSF  +F  RKK+LTNHWR FIRPLMWR KW ELRI E++S+AL+Y 
Sbjct:   109 SHYWDETDLGPAYDSFSSIFHFRKKRLTNHWRRFIRPLMWRSKWVELRIRELESRALEYP 168

Query:   119 RELAAYDQNKL-SRVNQSTVEEFGS--KSLAFSSQWYXXXXXXXXXXXXX-EDTTDLASY 174
             +EL  YDQ KL + ++ S +E  G   KSL FS+  Y              E T D+ASY
Sbjct:   169 KELELYDQEKLEANIDPSVLESCGEGIKSLPFSNPCYKKRAAKKRRKRKKVESTDDIASY 228

Query:   175 MSHHSLFSYLENKRSNPDGNSTADDFGNTVIMDQPADCNDKFGSNE-DALFFELKDDDSS 233
             M+ H+LFSY+E KR + DG   ADDFG+    D  +D N+    ++ D+LF   +D DS 
Sbjct:   229 MACHNLFSYIETKRLSSDGMGLADDFGDA--KDPRSDSNEPVDLDDADSLFHH-RDGDSV 285

Query:   234 LEQVLLKIETVHSRVHQLKSQLDIVMAKNASRFSSSENLSLLAPCDGQTSSAPSPTFSAG 293
             LE+VL KIE VHS+VH+LK+Q+D+V++KN +RFSSSENLSLLA      SSAPSPT SAG
Sbjct:   286 LEEVLWKIELVHSQVHRLKTQVDVVLSKNTARFSSSENLSLLA-----ASSAPSPTVSAG 340

Query:   294 -NADTTSIGAIYNPTQHISEYDIGDLVLP-ESAISSYAETIHVPDIIESTVGLLSAADVT 351
              N D  S GAIYN +QH+++Y +GD+V   E  ISSY +  H+PDIIESTVGL + ADVT
Sbjct:   341 GNGDVISFGAIYNASQHMADYGLGDIVFSSEGVISSYGDAFHIPDIIESTVGLFADADVT 400

Query:   352 FHQPQIGDSCEDILDNILIQNDGAEGEQHTFLGTSNQSIEKHNDPEKGEEGESTNPSPIP 411
              H  QIGDSCEDILDNILI+N  AE      + TS      H++ EK EEGE T+  P+ 
Sbjct:   401 LHHHQIGDSCEDILDNILIRNGVAEEMNGDLMETSC-----HDEAEKAEEGEGTSVPPLQ 455

Query:   412 ASEP----DPVAKSEVAQ--DQSTLKSCLASDINFPRNKRKRG-ER 450
              +E     +   KS V Q  + S L+SCLAS++  PRNKR RG ER
Sbjct:   456 QTEETEEYNQEEKSLVLQGREDSVLRSCLASEMLVPRNKRTRGGER 501


>TAIR|locus:2126407 [details] [associations]
            symbol:AT4G37440 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] EMBL:CP002687
            GenomeReviews:CT486007_GR EMBL:AL161591 EMBL:AL035601 EMBL:AY064030
            EMBL:AY096702 IPI:IPI00530750 PIR:T04738 RefSeq:NP_195460.1
            UniGene:At.27472 PRIDE:Q9SZU4 EnsemblPlants:AT4G37440.1
            GeneID:829898 KEGG:ath:AT4G37440 TAIR:At4g37440
            HOGENOM:HOG000015192 InParanoid:Q9SZU4 OMA:LTDHWRR PhylomeDB:Q9SZU4
            ProtClustDB:CLSN2685795 Genevestigator:Q9SZU4 Uniprot:Q9SZU4
        Length = 471

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 113/345 (32%), Positives = 172/345 (49%)

Query:     7 EDVEVDIVKFTTDGEIRLTEAEDPDATE-YSSSFGNTEPDTERCSGLSEVEVESQYFDVN 65
             ED EVDI++   + EI+++  +D   T+ YSSSFG T+ + E     ++ EV+S      
Sbjct:    70 ED-EVDILECNDNIEIQVSGCDD--GTDGYSSSFGGTDSEHE-----NDQEVDSMI---- 117

Query:    66 GLRTNCDSFGRLFQMRKKKLTNHWRSFIRP-LMWRCKWAELRINEIQSQALKYARELAAY 124
                  C+       +RK+KLT+HWR F++P LMWRCKW EL+  E+Q+QA KY +E+  Y
Sbjct:   118 -----CNETSLPLWVRKRKLTDHWRRFVQPTLMWRCKWIELKYKELQNQAQKYDKEVEEY 172

Query:   125 DQNKLSRVNQSTVEEFGSKSLA-FSSQWYXXXXXXXXXXXXXEDTTDLASYMSHHSLFSY 183
              Q K   +     EE G K+L                     E+T D+ SY S+H+LFSY
Sbjct:   173 YQAKKLELENVKSEELGVKALPPLPCYTQKTRLMKRKTRKRVEETADVTSYASNHNLFSY 232

Query:   184 LENKRSNPDGNSTADDFGNTVIMDQP-ADCNDKFGSNEDALFFELKDDDSSLEQVLLKIE 242
              + ++S  D     +D  N+  +D+      D+   +E+    E ++ D+ LEQ+LLKIE
Sbjct:   233 YDCRKSLAD--IALND--NSRNLDKKNKSAKDETAFSEETPPLEFREGDAYLEQILLKIE 288

Query:   243 TVHSRVHQLKSQLDIVMAKNASRFSSSENLSLLAPCDGQTSSAPS-PTFSAGNADTTSIG 301
                S    LK ++D V+++N S F  +  ++ L   D  TSS    P  +  N D  SI 
Sbjct:   289 AAKSEARNLKIRVDKVLSENPSIFPLANTVNPLGAADVYTSSEQQKPLLAIKNEDEKSII 348

Query:   302 AIYNPTQ-------HISEYD--IGDLVLPESAISSYAETIHV-PD 336
             +   P +       H+S  D    D++L E   S   E   + PD
Sbjct:   349 SEEKPVKSASVSSHHVSPEDDETTDILLSEILASKRREGKSIIPD 393


>TAIR|locus:2083083 [details] [associations]
            symbol:AT3G50040 "AT3G50040" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:BT026049
            IPI:IPI00537647 RefSeq:NP_190573.2 UniGene:At.50261
            EnsemblPlants:AT3G50040.1 GeneID:824166 KEGG:ath:AT3G50040
            TAIR:At3g50040 eggNOG:NOG256196 HOGENOM:HOG000121768 OMA:RSEMDIS
            PhylomeDB:Q147P4 ProtClustDB:CLSN2918554 Genevestigator:Q147P4
            Uniprot:Q147P4
        Length = 421

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 103/357 (28%), Positives = 161/357 (45%)

Query:     7 EDVEVDIVKFTTDGEIRLTEAEDP-DATEYSSSFGNTEPDTERCS-GLSEVEVESQYFDV 64
             ED+ VDI+K+  D E    E E+       SSSFG++    +    G  + E +S   + 
Sbjct:    36 EDI-VDILKWHDDFE---EEREEVLCGASSSSSFGDSMCARDGDDFGFGD-EAQSMLSND 90

Query:    65 NGLRTNCDSFGRLFQMRKKKLTNHWRSFIRPLMWRCKWAELRINEIQSQALKYARELAAY 124
               L   CD       + KKK  + WR   +P+MWRCKW EL++ EIQSQA  Y +E+  Y
Sbjct:    91 YPLPGTCDDGTEFLGLPKKKTNDRWRRLTKPIMWRCKWIELKVKEIQSQARGYEKEVKDY 150

Query:   125 DQNKLSRVNQSTVEEFGSKSLAFSSQWYXXXXXXXXXXXXXEDTTDLASYMSHHSLFSYL 184
                K   + +S +E F  KS+ F                  E+TTD+A+YMS+H+LFSY 
Sbjct:   151 YLTKQFDLEKSKLEGFDGKSIPFRENNQRRNVFKRGRRKRVEETTDVAAYMSNHNLFSYA 210

Query:   185 ENKRS-NPDGNSTADDFGNTVIMDQPADCNDKFGSNEDALFFELKDDDSSLEQVLLKIET 243
             + +   N  G     DFG         D  +     +D+L  EL   D  L + L KI+ 
Sbjct:   211 DKRVPVNVKGQYLDSDFGTGRKATGKQDAIE-----DDSLISELDCSDDVLAKFLCKIDE 265

Query:   244 VHSRVHQLKSQLDIVMAKNASRFSSSENLSLLAPCDGQTSSAPSPTFSAGNADTTSIGAI 303
                +  +L+ ++D +M  +    +SS    ++APC   +        +   A  T +   
Sbjct:   266 AQGKARRLRKRVDQLMWDSQPAHTSSMP-QMVAPCHRDSMIQTGKKCALVEAPLTHV--- 321

Query:   304 YNPTQHISEYDIGDLVLPESAISSYAETIHVPDIIESTVGLLSAA-DVTFHQPQIGD 359
              N  Q I    I  L++P++ I     T + P  I S++       D+   +P++ D
Sbjct:   322 QNGQQCIPADHIEHLMVPQTHIGGQCLTNNSP--ISSSLRFHPILEDLLMDEPEMND 376


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.310   0.128   0.365    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      469       442   0.00090  118 3  11 23  0.49    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  613 (65 KB)
  Total size of DFA:  274 KB (2144 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  45.52u 0.10s 45.62t   Elapsed:  00:00:02
  Total cpu time:  45.52u 0.10s 45.62t   Elapsed:  00:00:02
  Start:  Thu May  9 17:05:31 2013   End:  Thu May  9 17:05:33 2013

Back to top