BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 012161
         (469 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q2M2I8|AAK1_HUMAN AP2-associated protein kinase 1 OS=Homo sapiens GN=AAK1 PE=1 SV=3
          Length = 961

 Score = 32.7 bits (73), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 6/54 (11%)

Query: 408 SPIPASEPDPVAKSEVAQDQSTLKSCLASDIN------FPRNKRKRGERKAGPG 455
           SPIPA  P+PV  SE A  ++  K+ L   I        PR + K G+ +  PG
Sbjct: 327 SPIPAKLPEPVKASEAAAKKTQPKARLTDPIPTTETSIAPRQRPKAGQTQPNPG 380


>sp|F1SPM8|AAK1_PIG AP2-associated protein kinase 1 OS=Sus scrofa GN=AAK1 PE=2 SV=2
          Length = 968

 Score = 32.3 bits (72), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 6/54 (11%)

Query: 408 SPIPASEPDPVAKSEVAQDQSTLKSCLASDIN------FPRNKRKRGERKAGPG 455
           SPIPA  P+PV  SE A  ++  K+ L   I        PR + K G+ +  PG
Sbjct: 327 SPIPAKLPEPVKASEAAAKKTQPKARLTDPIPTTETSIAPRQRPKAGQTQPNPG 380


>sp|Q3UHJ0|AAK1_MOUSE AP2-associated protein kinase 1 OS=Mus musculus GN=Aak1 PE=1 SV=2
          Length = 959

 Score = 32.3 bits (72), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 6/54 (11%)

Query: 408 SPIPASEPDPVAKSEVAQDQSTLKSCLASDIN------FPRNKRKRGERKAGPG 455
           SPIPA  P+PV  SE A  ++  K+ L   I        PR + K G+ +  PG
Sbjct: 327 SPIPAKLPEPVKASEAAVKKTQPKARLTDPIPTTETSIAPRQRPKAGQTQPNPG 380


>sp|Q9H7C4|SYNCI_HUMAN Syncoilin OS=Homo sapiens GN=SYNC PE=1 SV=3
          Length = 482

 Score = 32.3 bits (72), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 10/92 (10%)

Query: 220 EDALFFELKDDDSSLEQVLLKIETVHSRVHQLKSQLDIVMAKNAS----RFSSSENLS-- 273
           ED +    +  D  ++Q   ++E +  R  QL++ + +   KN      R S +E LS  
Sbjct: 393 EDQIALVRQKRDEEVQQYREQLEEMEERQRQLRNGVQLQQQKNKEMEQLRLSLAEELSTY 452

Query: 274 --LLAPCDGQTSSAPSPTFSAGNADTTSIGAI 303
             +L P       A +PT  AG  +T S GA+
Sbjct: 453 KAMLLPKS--LEQADAPTSQAGGMETQSQGAV 482


>sp|Q6YZA9|GL82_ORYSJ Germin-like protein 8-2 OS=Oryza sativa subsp. japonica GN=GER3
           PE=2 SV=1
          Length = 221

 Score = 32.0 bits (71), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 13/26 (50%), Positives = 19/26 (73%)

Query: 194 NSTADDFGNTVIMDQPADCNDKFGSN 219
           N++ADDF    ++D+P D N+K GSN
Sbjct: 54  NASADDFFKAAMLDKPRDTNNKVGSN 79


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.310    0.127    0.364 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 177,613,875
Number of Sequences: 539616
Number of extensions: 7457358
Number of successful extensions: 19377
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 19362
Number of HSP's gapped (non-prelim): 56
length of query: 469
length of database: 191,569,459
effective HSP length: 121
effective length of query: 348
effective length of database: 126,275,923
effective search space: 43944021204
effective search space used: 43944021204
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)