Your job contains 1 sequence.
>012162
MSFEMQANEGEGSLPWDRYTHVFDLVQKGNRAFRESNFEEAISNYSRANNIKPGDPIVLG
NRSSAYIRISQFLKHRPPSASEYRPLNGLDPTTHAELALKDAEKLLNLQSNSMKSHLLKA
NALILLERYDMARDAILSGLQVDPFSNPLQASLQNLERTTASLIGRRIHGTPERTDDFDC
TLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLFITPRTCAVSVTLNSIIQK
NFPEEYAERKSEHDSLINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLMVRRIMEGNHR
MGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSWDQDGYRVAEIE
WVQDIHPEGVEDRADLQDLTNNAAEYARLWLRREKESARQDRRRLEKLLNVEVMMPPSQD
PERFSFWLATLSDRRPSERLELLRIRDTRERIRRGLIFLRAEEQGCRLQ
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012162
(469 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2035025 - symbol:AT1G18660 species:3702 "Arabi... 1570 3.1e-161 1
MGI|MGI:1921615 - symbol:Lonrf3 "LON peptidase N-terminal... 446 1.3e-50 3
UNIPROTKB|Q496Y0 - symbol:LONRF3 "LON peptidase N-termina... 439 1.9e-49 3
UNIPROTKB|K7GLC4 - symbol:LONRF3 "Uncharacterized protein... 438 2.2e-49 3
UNIPROTKB|F1RU80 - symbol:LONRF3 "Uncharacterized protein... 438 4.0e-49 3
UNIPROTKB|H0Y7Q8 - symbol:LONRF3 "LON peptidase N-termina... 439 8.7e-49 2
UNIPROTKB|G3X6C1 - symbol:LONRF3 "Uncharacterized protein... 432 1.2e-48 3
UNIPROTKB|K7GKX2 - symbol:LONRF3 "Uncharacterized protein... 438 1.7e-47 2
UNIPROTKB|F1PSB6 - symbol:LONRF3 "Uncharacterized protein... 439 2.8e-47 2
UNIPROTKB|F1NNQ7 - symbol:Gga.54568 "Uncharacterized prot... 437 1.5e-46 2
UNIPROTKB|K7GS78 - symbol:LONRF3 "Uncharacterized protein... 438 1.7e-45 3
ZFIN|ZDB-GENE-101021-4 - symbol:lonrf1 "LON peptidase N-t... 465 3.9e-44 1
ZFIN|ZDB-GENE-081104-397 - symbol:lonrf1l "LON peptidase ... 446 9.9e-44 2
UNIPROTKB|B3KUN7 - symbol:LONRF3 "LON peptidase N-termina... 439 1.2e-43 2
UNIPROTKB|F1P5G6 - symbol:LONRF2 "Uncharacterized protein... 441 7.7e-43 2
UNIPROTKB|Q17RB8 - symbol:LONRF1 "LON peptidase N-termina... 439 7.9e-43 2
UNIPROTKB|Q1L5Z9 - symbol:LONRF2 "LON peptidase N-termina... 416 2.3e-42 3
UNIPROTKB|J9P3L7 - symbol:LONRF1 "Uncharacterized protein... 438 5.3e-42 2
RGD|1562583 - symbol:Lonrf1 "LON peptidase N-terminal dom... 436 1.5e-41 2
UNIPROTKB|H7C5V9 - symbol:LONRF1 "LON peptidase N-termina... 439 2.2e-41 1
UNIPROTKB|E1B964 - symbol:LOC100849413 "Uncharacterized p... 436 6.4e-41 1
UNIPROTKB|I3LT33 - symbol:LONRF1 "Uncharacterized protein... 437 1.4e-40 1
UNIPROTKB|F1SEU6 - symbol:LONRF1 "Uncharacterized protein... 436 2.5e-40 1
UNIPROTKB|F1P3J6 - symbol:Gga.40071 "Uncharacterized prot... 426 5.3e-40 1
UNIPROTKB|F1NWA3 - symbol:F1NWA3 "Uncharacterized protein... 425 6.8e-40 1
ZFIN|ZDB-GENE-030131-8303 - symbol:si:ch1073-440b2.1 "si:... 413 1.3e-38 1
UNIPROTKB|F1PPT8 - symbol:LONRF2 "Uncharacterized protein... 400 3.0e-38 2
RGD|1562137 - symbol:Lonrf2 "LON peptidase N-terminal dom... 409 3.4e-38 1
ASPGD|ASPL0000000141 - symbol:AN5961 species:162425 "Emer... 331 3.2e-29 1
UNIPROTKB|K7GRY6 - symbol:LONRF3 "Uncharacterized protein... 279 3.4e-24 1
FB|FBgn0052369 - symbol:CG32369 species:7227 "Drosophila ... 176 3.1e-21 3
UNIPROTKB|E9PQH4 - symbol:LONRF1 "LON peptidase N-termina... 235 3.2e-19 1
UNIPROTKB|I3LGG6 - symbol:I3LGG6 "Uncharacterized protein... 214 6.7e-17 1
POMBASE|SPBC14F5.10c - symbol:SPBC14F5.10c "ubiquitin-pro... 202 2.9e-14 2
TAIR|locus:2018427 - symbol:AT1G75460 species:3702 "Arabi... 196 7.6e-14 1
TAIR|locus:2013144 - symbol:AT1G19740 species:3702 "Arabi... 187 1.5e-12 1
UNIPROTKB|F1STF3 - symbol:LONRF2 "Uncharacterized protein... 186 1.1e-11 3
UNIPROTKB|I3LHE2 - symbol:LONRF2 "Uncharacterized protein... 186 1.3e-11 3
UNIPROTKB|F1MT19 - symbol:F1MT19 "Uncharacterized protein... 156 1.1e-10 2
WB|WBGene00011365 - symbol:T02C1.1 species:6239 "Caenorha... 156 1.5e-10 1
UNIPROTKB|G3X8D4 - symbol:RNF168 "E3 ubiquitin-protein li... 138 2.7e-10 2
TAIR|locus:2086666 - symbol:AT3G27330 species:3702 "Arabi... 178 3.9e-10 1
ZFIN|ZDB-GENE-081031-50 - symbol:btr19 "bloodthirsty-rela... 148 1.1e-09 1
UNIPROTKB|F8WD60 - symbol:RNF168 "E3 ubiquitin-protein li... 147 1.4e-09 1
RGD|1306757 - symbol:Rnf125 "ring finger protein 125" spe... 155 4.1e-09 1
GENEDB_PFALCIPARUM|PF11_0244 - symbol:PF11_0244 "hypothet... 167 4.3e-09 1
UNIPROTKB|Q8IID0 - symbol:PF11_0244 "Conserved Plasmodium... 167 4.3e-09 1
ZFIN|ZDB-GENE-070912-318 - symbol:ftr27 "finTRIM family, ... 141 6.2e-09 1
UNIPROTKB|H0Y340 - symbol:RFWD2 "E3 ubiquitin-protein lig... 140 7.9e-09 1
UNIPROTKB|G3N0X7 - symbol:G3N0X7 "Uncharacterized protein... 161 1.2e-08 1
UNIPROTKB|G3N3N3 - symbol:G3N3N3 "Uncharacterized protein... 161 1.2e-08 1
MGI|MGI:1914914 - symbol:Rnf125 "ring finger protein 125"... 151 1.4e-08 1
UNIPROTKB|E1BJY5 - symbol:RNF125 "Uncharacterized protein... 150 1.8e-08 1
UNIPROTKB|K7GL56 - symbol:LOC100517591 "Uncharacterized p... 145 2.0e-08 1
UNIPROTKB|J9PBI0 - symbol:RNF125 "Uncharacterized protein... 148 3.3e-08 1
UNIPROTKB|Q96EQ8 - symbol:RNF125 "E3 ubiquitin-protein li... 148 3.3e-08 1
UNIPROTKB|F1SAL7 - symbol:LOC100517591 "Uncharacterized p... 145 7.9e-08 1
UNIPROTKB|J3KSI2 - symbol:RNF138 "E3 ubiquitin-protein li... 130 9.6e-08 1
UNIPROTKB|J3QKM8 - symbol:RNF138 "E3 ubiquitin-protein li... 130 9.6e-08 1
UNIPROTKB|Q8IYW5 - symbol:RNF168 "E3 ubiquitin-protein li... 147 1.1e-07 2
RGD|1560267 - symbol:RGD1560267 "similar to ring finger p... 138 1.2e-07 1
TAIR|locus:2037294 - symbol:AT1G74990 species:3702 "Arabi... 129 1.2e-07 1
UNIPROTKB|D4A9N5 - symbol:Trim25 "Protein Trim25" species... 143 1.3e-07 2
CGD|CAL0002668 - symbol:TRY3 species:5476 "Candida albica... 151 1.5e-07 1
UNIPROTKB|Q5A1M4 - symbol:CaO19.1971 "Potential zinc RING... 151 1.5e-07 1
ZFIN|ZDB-GENE-030131-6013 - symbol:rnf168 "ring finger pr... 138 1.9e-07 2
ZFIN|ZDB-GENE-060825-109 - symbol:btr04 "bloodthirsty-rel... 149 2.0e-07 1
UNIPROTKB|H3BRQ5 - symbol:BFAR "Bifunctional apoptosis re... 127 2.0e-07 1
UNIPROTKB|G3X8F3 - symbol:G3X8F3 "Uncharacterized protein... 150 2.1e-07 1
ZFIN|ZDB-GENE-060929-1066 - symbol:btr16 "bloodthirsty-re... 150 2.2e-07 1
ZFIN|ZDB-GENE-060825-103 - symbol:zgc:153151 "zgc:153151"... 149 2.3e-07 1
RGD|1594396 - symbol:Trim25 "tripartite motif-containing ... 143 3.4e-07 2
UNIPROTKB|E9PSR5 - symbol:Trim25 "Protein Trim25" species... 143 3.4e-07 2
ZFIN|ZDB-GENE-081031-80 - symbol:btr21 "bloodthirsty-rela... 148 3.9e-07 1
UNIPROTKB|D6RAH9 - symbol:LNX1 "E3 ubiquitin-protein liga... 123 5.5e-07 1
ZFIN|ZDB-GENE-060126-4 - symbol:ftr79 "finTRIM family, me... 143 5.5e-07 1
ZFIN|ZDB-GENE-060421-3827 - symbol:btr32 "bloodthirsty-re... 146 5.9e-07 1
ZFIN|ZDB-GENE-080213-2 - symbol:btr18 "bloodthirsty-relat... 146 5.9e-07 1
ZFIN|ZDB-GENE-080212-7 - symbol:zgc:173581 "zgc:173581" s... 146 6.3e-07 1
ZFIN|ZDB-GENE-030131-5243 - symbol:rnf2 "ring finger prot... 142 6.9e-07 1
UNIPROTKB|D6RAS2 - symbol:TRIM60 "Tripartite motif-contai... 122 7.0e-07 1
UNIPROTKB|D6RB76 - symbol:LNX1 "E3 ubiquitin-protein liga... 121 9.0e-07 1
UNIPROTKB|D4A0Y0 - symbol:D4A0Y0 "Uncharacterized protein... 121 9.0e-07 1
ZFIN|ZDB-GENE-020620-2 - symbol:bty "bloodthirsty" specie... 144 9.8e-07 1
UNIPROTKB|Q48CY0 - symbol:PSPPH_4657 "ATP-dependent prote... 132 9.9e-07 1
UNIPROTKB|Q9KPR3 - symbol:VC_2303 "Putative uncharacteriz... 131 1.1e-06 1
TIGR_CMR|VC_2303 - symbol:VC_2303 "conserved hypothetical... 131 1.1e-06 1
UNIPROTKB|C9JWN8 - symbol:TRIM5 "Tripartite motif-contain... 120 1.2e-06 1
ZFIN|ZDB-GENE-060825-228 - symbol:btr02 "bloodthirsty-rel... 142 1.2e-06 1
RGD|1305491 - symbol:Rnf2 "ring finger protein 2" species... 139 1.2e-06 1
UNIPROTKB|A6QLQ0 - symbol:RNF2 "RNF2 protein" species:991... 139 1.5e-06 1
UNIPROTKB|Q99496 - symbol:RNF2 "E3 ubiquitin-protein liga... 139 1.5e-06 1
UNIPROTKB|F1S3N6 - symbol:RNF2 "Uncharacterized protein" ... 139 1.5e-06 1
UNIPROTKB|Q5R9J5 - symbol:RNF2 "E3 ubiquitin-protein liga... 139 1.5e-06 1
MGI|MGI:1101759 - symbol:Rnf2 "ring finger protein 2" spe... 139 1.5e-06 1
UNIPROTKB|E2RFW1 - symbol:RNF2 "Uncharacterized protein" ... 139 1.5e-06 1
ZFIN|ZDB-GENE-030616-515 - symbol:ftr53 "finTRIM family, ... 142 1.7e-06 1
ZFIN|ZDB-GENE-080402-4 - symbol:btr22 "bloodthirsty-relat... 142 1.7e-06 1
UNIPROTKB|F1S705 - symbol:RFWD2 "Uncharacterized protein"... 140 1.9e-06 1
UNIPROTKB|A2AAZ5 - symbol:TRIM39 "E3 ubiquitin-protein li... 118 1.9e-06 1
WARNING: Descriptions of 328 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2035025 [details] [associations]
symbol:AT1G18660 species:3702 "Arabidopsis thaliana"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] InterPro:IPR001841
InterPro:IPR003111 InterPro:IPR011990 Pfam:PF02190 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002684 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 IPI:IPI00522616 RefSeq:NP_973859.1
UniGene:At.20365 UniGene:At.67116 ProteinModelPortal:F4ICB5
SMR:F4ICB5 PRIDE:F4ICB5 EnsemblPlants:AT1G18660.4 GeneID:838447
KEGG:ath:AT1G18660 OMA:EVEITEC Uniprot:F4ICB5
Length = 491
Score = 1570 (557.7 bits), Expect = 3.1e-161, P = 3.1e-161
Identities = 294/430 (68%), Positives = 353/430 (82%)
Query: 9 EGEGSLPWDRYTHVFDLVQKGNRAFRESNFEEAISNYSRANNIKPGDPIVLGNRSSAYIR 68
E + SLP D + VF LV+KGN++F+ES FEEAIS+YS+AN+IKP DPIVLGNRS+AYIR
Sbjct: 26 EADNSLPLDIHNQVFQLVEKGNQSFKESRFEEAISSYSKANSIKPLDPIVLGNRSAAYIR 85
Query: 69 ISQFLKHRPPSASEYRPLNGLDPTTHXXXXXXXXXXXXXXQSNSMKSHLLKANALILLER 128
Q+LK R S SEY+PLNG D + QS+ +KS++ KA AL+LLER
Sbjct: 86 FGQYLKQRSASISEYKPLNGFDMSMLGELALKDADKLMSLQSSLVKSYITKACALMLLER 145
Query: 129 YDMARDAILSGLQVDPFSNPLQASLQNLERTTASLIGRRIHGTPERTDDFDCTLCLKLLY 188
Y++ARD ILSGLQ+DPFS PL+++LQ LE+ + + R+ HG ER+DDFDCT+CLKLLY
Sbjct: 146 YEVARDTILSGLQIDPFSGPLRSNLQELEKVMPNSM-RKTHGMAERSDDFDCTVCLKLLY 204
Query: 189 EPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLFITPRTCAVSVTLNSIIQKNFPEEYAE 248
EP TTPCGH+FCRSCLFQSMDRGNKCPLCR V+F+TPRTCAVSVTLN+II+KNFPEEYAE
Sbjct: 205 EPATTPCGHTFCRSCLFQSMDRGNKCPLCRTVIFMTPRTCAVSVTLNNIIEKNFPEEYAE 264
Query: 249 RKSEHDSLINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLMVRRIMEGNHRMGMVIIDP 308
RKSE D+L++ G + MPLFVMDV+IPCQ+ LHIFEPRYRLMVRRIMEGNHRMGMV +D
Sbjct: 265 RKSEQDTLVHLGNESMPLFVMDVIIPCQKLSLHIFEPRYRLMVRRIMEGNHRMGMVALDS 324
Query: 309 TTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSWDQDGYRVAEIEWVQDIHPE 368
TGS D ACEVEITEC+PLPDGRFVLE+ES RR RI+++WDQDGYRVAE+EWV+DI P+
Sbjct: 325 ATGSPVDVACEVEITECDPLPDGRFVLELESHRRCRIVKAWDQDGYRVAEVEWVKDIPPQ 384
Query: 369 GVEDRADLQDLTNNAAEYARLWLRREKESARQ-DRRRLEKLLNVEVMMPPSQDPERFSFW 427
+ +ADL++LT +AA +AR WL R KE+ARQ DRRRLE LLNVE M+P QDPERFSFW
Sbjct: 385 SEQGKADLRELTTSAASFARSWLDRAKEAARQGDRRRLEILLNVESMIPTPQDPERFSFW 444
Query: 428 LATLSDRRPS 437
LATL+DRRPS
Sbjct: 445 LATLTDRRPS 454
>MGI|MGI:1921615 [details] [associations]
symbol:Lonrf3 "LON peptidase N-terminal domain and ring
finger 3" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00028 SMART:SM00184 MGI:MGI:1921615 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013105 Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 eggNOG:COG2802
HOGENOM:HOG000060199 HOVERGEN:HBG081924 CTD:79836 EMBL:AK016522
EMBL:AL450395 EMBL:BC120688 EMBL:BC120690 IPI:IPI00137246
RefSeq:NP_083170.1 UniGene:Mm.327654 HSSP:Q13049
ProteinModelPortal:Q9D4H7 SMR:Q9D4H7 PhosphoSite:Q9D4H7
PRIDE:Q9D4H7 Ensembl:ENSMUST00000016383 GeneID:74365 KEGG:mmu:74365
UCSC:uc009sxm.1 GeneTree:ENSGT00440000033329 InParanoid:Q9D4H7
OrthoDB:EOG4RXXZM NextBio:340559 Bgee:Q9D4H7 CleanEx:MM_LONRF3
Genevestigator:Q9D4H7 Uniprot:Q9D4H7
Length = 753
Score = 446 (162.1 bits), Expect = 1.3e-50, Sum P(3) = 1.3e-50
Identities = 99/254 (38%), Positives = 144/254 (56%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLF--ITPRTCAVSVTL 234
D +C+LC++L YEP+TTPCGH+FC CL + +D KCPLC+ VL + R + +V L
Sbjct: 458 DLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDVLLQCLPSRKYSKNVIL 517
Query: 235 NSIIQKNFPEEYAERK----SEHDSLINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLM 290
+I PEE+ ERK E + L N ++ P+FV + P PLHIFEP YRLM
Sbjct: 518 EELIATFLPEEFKERKRLYEEEMEELSNLNKNV-PIFVCTMAYPTVPCPLHIFEPCYRLM 576
Query: 291 VRRIME-GNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSW 349
+RR +E G + GM + DP G V ++ C +EI + DGR V++ +RRF++L
Sbjct: 577 IRRCIETGTRQFGMCLGDPVKGFV-EYGCILEIRNVQFFSDGRSVVDSIGKRRFKVLHQG 635
Query: 350 DQDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYARLWLRREKESARQDRRRLEKLL 409
+DGY A+IE+++D +G +D A+L L N E A W K S + ++L
Sbjct: 636 QRDGYNTADIEYIEDQKVQG-DDCAELMGLHNCVYEQASSWFHSLKASLKN------RIL 688
Query: 410 NVEVMMPPS-QDPE 422
N MP +DP+
Sbjct: 689 NHFGPMPEKDEDPQ 702
Score = 89 (36.4 bits), Expect = 1.3e-50, Sum P(3) = 1.3e-50
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 25 LVQKGNRAFRESNFEEAISNYSRANNIKPGDPIVLGNRSSAYIRISQF--LKHRPPSASE 82
L +GNR FRE E A+ Y+ A + P D ++ NRS Y + H A +
Sbjct: 247 LRHEGNRLFREHQVEAALLKYNEAVRLAPNDHLLYSNRSQIYFTLESHEDALHDAEIACK 306
Query: 83 YRPL 86
RP+
Sbjct: 307 LRPM 310
Score = 38 (18.4 bits), Expect = 1.3e-50, Sum P(3) = 1.3e-50
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 114 KSHLLKANALILLERYDMARDAILSGLQVDPFSNPLQASLQ--NLE 157
K+H KA AL L + A L + +D + ++ Q NLE
Sbjct: 313 KAHFRKAQALATLGKVKEALKEFLYCVSLDGKNKSARSEAQRENLE 358
>UNIPROTKB|Q496Y0 [details] [associations]
symbol:LONRF3 "LON peptidase N-terminal domain and RING
finger protein 3" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00028 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR013105
Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907
HSSP:Q8IZP6 GO:GO:0004176 eggNOG:COG2802 HOGENOM:HOG000060199
HOVERGEN:HBG081924 EMBL:AK026265 EMBL:AK091777 EMBL:AL772284
EMBL:BC099847 EMBL:BC100671 EMBL:BC103491 IPI:IPI00300753
IPI:IPI00640460 IPI:IPI00827481 RefSeq:NP_001027026.1
RefSeq:NP_079054.3 UniGene:Hs.144266 ProteinModelPortal:Q496Y0
SMR:Q496Y0 IntAct:Q496Y0 PhosphoSite:Q496Y0 DMDM:121949074
PRIDE:Q496Y0 Ensembl:ENST00000304778 Ensembl:ENST00000365713
Ensembl:ENST00000371628 Ensembl:ENST00000481285 GeneID:79836
KEGG:hsa:79836 UCSC:uc004eqw.3 UCSC:uc004eqx.3 CTD:79836
GeneCards:GC0XP118108 HGNC:HGNC:21152 neXtProt:NX_Q496Y0
PharmGKB:PA134900980 InParanoid:Q496Y0 OMA:VKLSALM PhylomeDB:Q496Y0
GenomeRNAi:79836 NextBio:69492 ArrayExpress:Q496Y0 Bgee:Q496Y0
CleanEx:HS_LONRF3 Genevestigator:Q496Y0 Uniprot:Q496Y0
Length = 759
Score = 439 (159.6 bits), Expect = 1.9e-49, Sum P(3) = 1.9e-49
Identities = 99/254 (38%), Positives = 142/254 (55%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLF--ITPRTCAVSVTL 234
D +C LC++L YEP+TTPCGH+FC CL + +D KCPLC+ L + R + +V +
Sbjct: 464 DLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVIM 523
Query: 235 NSIIQKNFPEEYAERKS----EHDSLINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLM 290
+I K PEE ER+ E + L N ++ P+FV + P PLHIFEP YRLM
Sbjct: 524 EELIAKFLPEELKERRKLYEEEMEELSNLNKNV-PIFVCTMAYPTVPCPLHIFEPCYRLM 582
Query: 291 VRRIME-GNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSW 349
+RR +E G + GM + DP G A++ C +EI + DGR V++ +RRFR+L
Sbjct: 583 IRRCIETGTRQFGMCLGDPVKG-FAEYGCILEIRNVQFFADGRSVVDSIGKRRFRVLHQS 641
Query: 350 DQDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYARLWLRREKESARQDRRRLEKLL 409
+DGY A+IE+++D +G ED A+L L N + A LW K S + ++L
Sbjct: 642 QRDGYNTADIEYIEDQKVQG-EDCAELMGLHNCVYQQASLWFHSLKLSLKN------RIL 694
Query: 410 NVEVMMPPSQ-DPE 422
N MP DP+
Sbjct: 695 NHFGPMPEKDADPQ 708
Score = 86 (35.3 bits), Expect = 1.9e-49, Sum P(3) = 1.9e-49
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 25 LVQKGNRAFRESNFEEAISNYSRANNIKPGDPIVLGNRSSAYIRISQFLK--HRPPSASE 82
L +GNR +RE E A+ Y+ A + P D ++ NRS Y + H A +
Sbjct: 246 LRHEGNRLYRERQVEAALLKYNEAVKLAPNDHLLYSNRSQIYFTLESHENALHDAEIACK 305
Query: 83 YRPL 86
RP+
Sbjct: 306 LRPM 309
Score = 38 (18.4 bits), Expect = 1.9e-49, Sum P(3) = 1.9e-49
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 114 KSHLLKANALILLERYDMARDAILSGLQVDPFSNPLQASLQ--NLE 157
K+H KA AL L + + A L + +D + + Q NLE
Sbjct: 312 KAHFRKAQALATLGKVEEALREFLYCVSLDGKNKRARCEAQRDNLE 357
>UNIPROTKB|K7GLC4 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00028 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR013105 Pfam:PF07719
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907
GeneTree:ENSGT00440000033329 EMBL:CU928929 GeneID:100517799
RefSeq:XP_003135396.2 Ensembl:ENSSSCT00000033278 Uniprot:K7GLC4
Length = 752
Score = 438 (159.2 bits), Expect = 2.2e-49, Sum P(3) = 2.2e-49
Identities = 98/254 (38%), Positives = 142/254 (55%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLF--ITPRTCAVSVTL 234
D +C+LC++L YEP+TTPCGH+FC CL + +D KCPLC+ L + R + +V +
Sbjct: 457 DLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVIM 516
Query: 235 NSIIQKNFPEEYAERK----SEHDSLINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLM 290
+I K PEE ER+ E + L N ++ P+FV + P PLHIFEP YRLM
Sbjct: 517 EELIAKFLPEELKERRRLYEEEMEELSNLNKNV-PIFVCTMAYPTVPCPLHIFEPCYRLM 575
Query: 291 VRRIME-GNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSW 349
+RR +E G + GM + DP G A++ C +EI + DGR V++ +RRF++L
Sbjct: 576 IRRCIETGTRQFGMCLGDPVKG-FAEYGCILEIRNVQFFADGRSVVDSIGKRRFKVLHQG 634
Query: 350 DQDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYARLWLRREKESARQDRRRLEKLL 409
+DGY A+IE+++D +G ED A+L L N E A W K S + ++L
Sbjct: 635 QRDGYNTADIEYIEDQKVQG-EDCAELMGLHNCVYEQASSWFHSLKSSLKN------RIL 687
Query: 410 NVEVMMPPSQ-DPE 422
N MP DP+
Sbjct: 688 NHFGPMPEKDADPQ 701
Score = 86 (35.3 bits), Expect = 2.2e-49, Sum P(3) = 2.2e-49
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 25 LVQKGNRAFRESNFEEAISNYSRANNIKPGDPIVLGNRSSAYIRISQF--LKHRPPSASE 82
L +GNR +RE E A+ Y+ A + P D ++ NRS Y + H A +
Sbjct: 244 LRHEGNRLYRERQVEAALLKYNEAVRLAPNDHLLYSNRSQIYFTLESHEDALHDAEIACK 303
Query: 83 YRPL 86
RP+
Sbjct: 304 LRPM 307
Score = 38 (18.4 bits), Expect = 2.2e-49, Sum P(3) = 2.2e-49
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 114 KSHLLKANALILLERYDMARDAILSGLQVDPFSNPLQASLQ 154
K+H KA AL L + + A L + +D + +A Q
Sbjct: 310 KAHFRKAQALATLGKVEEALREFLYCVSLDGKNKRARAEAQ 350
>UNIPROTKB|F1RU80 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00028 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013105 Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 OMA:VKLSALM
GeneTree:ENSGT00440000033329 EMBL:CU928929
Ensembl:ENSSSCT00000013812 Uniprot:F1RU80
Length = 788
Score = 438 (159.2 bits), Expect = 4.0e-49, Sum P(3) = 4.0e-49
Identities = 98/254 (38%), Positives = 142/254 (55%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLF--ITPRTCAVSVTL 234
D +C+LC++L YEP+TTPCGH+FC CL + +D KCPLC+ L + R + +V +
Sbjct: 457 DLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVIM 516
Query: 235 NSIIQKNFPEEYAERK----SEHDSLINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLM 290
+I K PEE ER+ E + L N ++ P+FV + P PLHIFEP YRLM
Sbjct: 517 EELIAKFLPEELKERRRLYEEEMEELSNLNKNV-PIFVCTMAYPTVPCPLHIFEPCYRLM 575
Query: 291 VRRIME-GNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSW 349
+RR +E G + GM + DP G A++ C +EI + DGR V++ +RRF++L
Sbjct: 576 IRRCIETGTRQFGMCLGDPVKG-FAEYGCILEIRNVQFFADGRSVVDSIGKRRFKVLHQG 634
Query: 350 DQDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYARLWLRREKESARQDRRRLEKLL 409
+DGY A+IE+++D +G ED A+L L N E A W K S + ++L
Sbjct: 635 QRDGYNTADIEYIEDQKVQG-EDCAELMGLHNCVYEQASSWFHSLKSSLKN------RIL 687
Query: 410 NVEVMMPPSQ-DPE 422
N MP DP+
Sbjct: 688 NHFGPMPEKDADPQ 701
Score = 86 (35.3 bits), Expect = 4.0e-49, Sum P(3) = 4.0e-49
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 25 LVQKGNRAFRESNFEEAISNYSRANNIKPGDPIVLGNRSSAYIRISQF--LKHRPPSASE 82
L +GNR +RE E A+ Y+ A + P D ++ NRS Y + H A +
Sbjct: 244 LRHEGNRLYRERQVEAALLKYNEAVRLAPNDHLLYSNRSQIYFTLESHEDALHDAEIACK 303
Query: 83 YRPL 86
RP+
Sbjct: 304 LRPM 307
Score = 38 (18.4 bits), Expect = 4.0e-49, Sum P(3) = 4.0e-49
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 114 KSHLLKANALILLERYDMARDAILSGLQVDPFSNPLQASLQ 154
K+H KA AL L + + A L + +D + +A Q
Sbjct: 310 KAHFRKAQALATLGKVEEALREFLYCVSLDGKNKRARAEAQ 350
>UNIPROTKB|H0Y7Q8 [details] [associations]
symbol:LONRF3 "LON peptidase N-terminal domain and RING
finger protein 3" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 EMBL:AL772284 HGNC:HGNC:21152
ProteinModelPortal:H0Y7Q8 Ensembl:ENST00000439603 Uniprot:H0Y7Q8
Length = 525
Score = 439 (159.6 bits), Expect = 8.7e-49, Sum P(2) = 8.7e-49
Identities = 99/254 (38%), Positives = 142/254 (55%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLF--ITPRTCAVSVTL 234
D +C LC++L YEP+TTPCGH+FC CL + +D KCPLC+ L + R + +V +
Sbjct: 230 DLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVIM 289
Query: 235 NSIIQKNFPEEYAERKS----EHDSLINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLM 290
+I K PEE ER+ E + L N ++ P+FV + P PLHIFEP YRLM
Sbjct: 290 EELIAKFLPEELKERRKLYEEEMEELSNLNKNV-PIFVCTMAYPTVPCPLHIFEPCYRLM 348
Query: 291 VRRIME-GNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSW 349
+RR +E G + GM + DP G A++ C +EI + DGR V++ +RRFR+L
Sbjct: 349 IRRCIETGTRQFGMCLGDPVKG-FAEYGCILEIRNVQFFADGRSVVDSIGKRRFRVLHQS 407
Query: 350 DQDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYARLWLRREKESARQDRRRLEKLL 409
+DGY A+IE+++D +G ED A+L L N + A LW K S + ++L
Sbjct: 408 QRDGYNTADIEYIEDQKVQG-EDCAELMGLHNCVYQQASLWFHSLKLSLKN------RIL 460
Query: 410 NVEVMMPPSQ-DPE 422
N MP DP+
Sbjct: 461 NHFGPMPEKDADPQ 474
Score = 87 (35.7 bits), Expect = 8.7e-49, Sum P(2) = 8.7e-49
Identities = 21/68 (30%), Positives = 31/68 (45%)
Query: 25 LVQKGNRAFRESNFEEAISNYSRANNIKPGDPIVLGNRSSAYIRISQFLK--HRPPSASE 82
L +GNR +RE E A+ Y+ A + P D ++ NRS Y + H A +
Sbjct: 53 LRHEGNRLYRERQVEAALLKYNEAVKLAPNDHLLYSNRSQIYFTLESHENALHDAEIACK 112
Query: 83 YRPLNGLD 90
RP+ D
Sbjct: 113 LRPMGFKD 120
>UNIPROTKB|G3X6C1 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00028 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013105 Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 CTD:79836 OMA:VKLSALM
GeneTree:ENSGT00440000033329 EMBL:DAAA02067124
RefSeq:NP_001178063.1 UniGene:Bt.92361 ProteinModelPortal:G3X6C1
Ensembl:ENSBTAT00000003384 GeneID:508189 KEGG:bta:508189
NextBio:20868400 Uniprot:G3X6C1
Length = 759
Score = 432 (157.1 bits), Expect = 1.2e-48, Sum P(3) = 1.2e-48
Identities = 91/230 (39%), Positives = 133/230 (57%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLF--ITPRTCAVSVTL 234
D +C+LC++L YEP+TTPCGH+FC CL + +D KCPLC+ L + R + +V +
Sbjct: 464 DLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVIM 523
Query: 235 NSIIQKNFPEEYAERK----SEHDSLINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLM 290
+I K PEE ER+ E + L N ++ P+FV + P PLHIFEP YRLM
Sbjct: 524 EELIAKFLPEELKERRRLYEEEMEELSNLNKNV-PIFVCTMAYPTVPCPLHIFEPCYRLM 582
Query: 291 VRRIME-GNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSW 349
+RR +E G + GM + DP G A++ C +EI + DGR V++ +RRF++L
Sbjct: 583 IRRCIETGTRQFGMCLGDPVKG-FAEYGCILEIRNVQFFADGRSVVDSIGKRRFKVLHQG 641
Query: 350 DQDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYARLWLRREKESAR 399
+DGY A+IE+++D +G ED A+L L + E A W K S +
Sbjct: 642 QRDGYNTADIEYIEDQKVQG-EDCAELMGLHSCVYEQASSWFHSLKSSLK 690
Score = 86 (35.3 bits), Expect = 1.2e-48, Sum P(3) = 1.2e-48
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 25 LVQKGNRAFRESNFEEAISNYSRANNIKPGDPIVLGNRSSAYIRISQF--LKHRPPSASE 82
L +GNR +RE E A+ Y+ A + P D ++ NRS Y + H A +
Sbjct: 246 LRHEGNRLYRERQVEAALLKYNEAVRLAPNDHLLYSNRSQIYFTLESHEDALHDAEIACK 305
Query: 83 YRPL 86
RP+
Sbjct: 306 LRPM 309
Score = 38 (18.4 bits), Expect = 1.2e-48, Sum P(3) = 1.2e-48
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 114 KSHLLKANALILLERYDMARDAILSGLQVDPFSNPLQASLQ 154
K+H KA AL L + + A L + +D + +A Q
Sbjct: 312 KAHFRKAQALATLGKVEEALREFLYCVSLDGRNKRARAEAQ 352
>UNIPROTKB|K7GKX2 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907
GeneTree:ENSGT00440000033329 EMBL:CU928929 RefSeq:XP_003360480.1
Ensembl:ENSSSCT00000035094 GeneID:100517799 Uniprot:K7GKX2
Length = 711
Score = 438 (159.2 bits), Expect = 1.7e-47, Sum P(2) = 1.7e-47
Identities = 98/254 (38%), Positives = 142/254 (55%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLF--ITPRTCAVSVTL 234
D +C+LC++L YEP+TTPCGH+FC CL + +D KCPLC+ L + R + +V +
Sbjct: 416 DLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVIM 475
Query: 235 NSIIQKNFPEEYAERK----SEHDSLINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLM 290
+I K PEE ER+ E + L N ++ P+FV + P PLHIFEP YRLM
Sbjct: 476 EELIAKFLPEELKERRRLYEEEMEELSNLNKNV-PIFVCTMAYPTVPCPLHIFEPCYRLM 534
Query: 291 VRRIME-GNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSW 349
+RR +E G + GM + DP G A++ C +EI + DGR V++ +RRF++L
Sbjct: 535 IRRCIETGTRQFGMCLGDPVKG-FAEYGCILEIRNVQFFADGRSVVDSIGKRRFKVLHQG 593
Query: 350 DQDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYARLWLRREKESARQDRRRLEKLL 409
+DGY A+IE+++D +G ED A+L L N E A W K S + ++L
Sbjct: 594 QRDGYNTADIEYIEDQKVQG-EDCAELMGLHNCVYEQASSWFHSLKSSLKN------RIL 646
Query: 410 NVEVMMPPSQ-DPE 422
N MP DP+
Sbjct: 647 NHFGPMPEKDADPQ 660
Score = 86 (35.3 bits), Expect = 1.7e-47, Sum P(2) = 1.7e-47
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 25 LVQKGNRAFRESNFEEAISNYSRANNIKPGDPIVLGNRSSAYIRISQF--LKHRPPSASE 82
L +GNR +RE E A+ Y+ A + P D ++ NRS Y + H A +
Sbjct: 244 LRHEGNRLYRERQVEAALLKYNEAVRLAPNDHLLYSNRSQIYFTLESHEDALHDAEIACK 303
Query: 83 YRPL 86
RP+
Sbjct: 304 LRPM 307
>UNIPROTKB|F1PSB6 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR003111 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005
PROSITE:PS50089 PROSITE:PS50293 SMART:SM00028 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR013105 Pfam:PF07719
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
OMA:VKLSALM GeneTree:ENSGT00440000033329 EMBL:AAEX03026821
Ensembl:ENSCAFT00000029170 Uniprot:F1PSB6
Length = 765
Score = 439 (159.6 bits), Expect = 2.8e-47, Sum P(2) = 2.8e-47
Identities = 93/230 (40%), Positives = 132/230 (57%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLF--ITPRTCAVSVTL 234
D +C LC++L YEP+TTPCGH+FC CL + +D KCPLC+ L + R + +V +
Sbjct: 470 DLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVIM 529
Query: 235 NSIIQKNFPEEYAERK----SEHDSLINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLM 290
+I K PEE ER+ E + L N ++ P+FV + P PLHIFEP YRLM
Sbjct: 530 EELIAKFLPEELKERRRLYEEEMEELSNLNKNV-PIFVCTMAYPTVPCPLHIFEPCYRLM 588
Query: 291 VRRIME-GNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSW 349
+RR +E G + GM + DP G A++ C +EI + DGR V++ +RRFR+L
Sbjct: 589 IRRCIETGTRQFGMCLGDPVKG-FAEYGCILEIRNVQFFADGRSVVDSIGKRRFRVLHQG 647
Query: 350 DQDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYARLWLRREKESAR 399
+DGY A+IE+++D +G ED A+L L N E A W K S +
Sbjct: 648 QRDGYNTADIEYIEDQKVQG-EDCAELMGLHNCVYEQASSWFHSLKSSLK 696
Score = 86 (35.3 bits), Expect = 2.8e-47, Sum P(2) = 2.8e-47
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 25 LVQKGNRAFRESNFEEAISNYSRANNIKPGDPIVLGNRSSAYIRISQF--LKHRPPSASE 82
L +GNR +RE E A+ Y+ A + P D ++ NRS Y + H A +
Sbjct: 253 LRHEGNRLYRERQVEAALLKYNEAVRLAPNDHLLYSNRSQIYFTLESHEDALHDAEIACK 312
Query: 83 YRPL 86
RP+
Sbjct: 313 LRPM 316
>UNIPROTKB|F1NNQ7 [details] [associations]
symbol:Gga.54568 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR003111 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005
PROSITE:PS50089 PROSITE:PS50293 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
OMA:VKLSALM GeneTree:ENSGT00440000033329 EMBL:AADN02013631
EMBL:AADN02013632 EMBL:AADN02013633 IPI:IPI00592342
Ensembl:ENSGALT00000014392 Uniprot:F1NNQ7
Length = 632
Score = 437 (158.9 bits), Expect = 1.5e-46, Sum P(2) = 1.5e-46
Identities = 95/240 (39%), Positives = 139/240 (57%)
Query: 171 TP-ERTD--DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLF---IT 224
TP E D D DC+LC++L YEP+TTPCGH+FC CL + +D KCPLC+ L +
Sbjct: 326 TPFESVDPSDLDCSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNPKCPLCKEGLSEQCLA 385
Query: 225 PRTCAVSVTLNSIIQKNFPEEYAERKSEHDS----LINFGVDLMPLFVMDVVIPCQRFPL 280
R +V + +I K PEE ER+ ++ L N ++ P+FV + P PL
Sbjct: 386 MRKYCKTVLMEELIAKYLPEELTERRKIYEEEIAELSNLNKNV-PIFVCTMAYPTVPCPL 444
Query: 281 HIFEPRYRLMVRRIME-GNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIES 339
HIFEP YRLM+RR ME G + GM I DP G AD+ C +EI E DGR V++
Sbjct: 445 HIFEPCYRLMIRRCMETGTKQFGMCISDPVKG-FADYGCILEIRNVEFFADGRSVVDSIG 503
Query: 340 RRRFRILRSWDQDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYARLWLRREKESAR 399
+RRF++++ +DGY A+IE+++D +G +D A L L ++ + A +W K++ +
Sbjct: 504 KRRFKVIQHSQRDGYNTADIEYIEDQKVQG-QDYAALLVLHDSVYDQAYMWFNSLKQALK 562
Score = 134 (52.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 27/83 (32%), Positives = 42/83 (50%)
Query: 172 PERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLFITPRTCAVS 231
P D C C L+EP++ PCGH+FC+ CL + +C LCR R V+
Sbjct: 88 PRDWDGCRCRKCQGFLFEPVSLPCGHTFCKKCLERDRAAATRCVLCREEG--GGRLPRVN 145
Query: 232 VTLNSIIQKNFPEEYAERKSEHD 254
V L++++ K FP + + H+
Sbjct: 146 VILSNLLGKWFPRQVRASQLRHE 168
Score = 69 (29.3 bits), Expect = 1.5e-46, Sum P(2) = 1.5e-46
Identities = 17/73 (23%), Positives = 33/73 (45%)
Query: 16 W-DRYTHVFDLVQKGNRAFRESNFEEAISNYSRANNIKPGDPIVLGNRS--SAYIRISQF 72
W R L +GN ++E A+ Y+ A ++ P D ++ NRS ++ ++ +
Sbjct: 155 WFPRQVRASQLRHEGNLLYQEKKLHAALQKYNEALSLAPNDHLLYSNRSQINSTLKACED 214
Query: 73 LKHRPPSASEYRP 85
H +A +P
Sbjct: 215 ALHDAETACRLQP 227
>UNIPROTKB|K7GS78 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 Pfam:PF02190 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00184 Prosite:PS00518 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR015947
SUPFAM:SSF88697 InterPro:IPR017907 GeneTree:ENSGT00440000033329
EMBL:CU928929 Ensembl:ENSSSCT00000036557 Uniprot:K7GS78
Length = 694
Score = 438 (159.2 bits), Expect = 1.7e-45, Sum P(3) = 1.7e-45
Identities = 98/254 (38%), Positives = 142/254 (55%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLF--ITPRTCAVSVTL 234
D +C+LC++L YEP+TTPCGH+FC CL + +D KCPLC+ L + R + +V +
Sbjct: 399 DLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVIM 458
Query: 235 NSIIQKNFPEEYAERK----SEHDSLINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLM 290
+I K PEE ER+ E + L N ++ P+FV + P PLHIFEP YRLM
Sbjct: 459 EELIAKFLPEELKERRRLYEEEMEELSNLNKNV-PIFVCTMAYPTVPCPLHIFEPCYRLM 517
Query: 291 VRRIME-GNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSW 349
+RR +E G + GM + DP G A++ C +EI + DGR V++ +RRF++L
Sbjct: 518 IRRCIETGTRQFGMCLGDPVKG-FAEYGCILEIRNVQFFADGRSVVDSIGKRRFKVLHQG 576
Query: 350 DQDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYARLWLRREKESARQDRRRLEKLL 409
+DGY A+IE+++D +G ED A+L L N E A W K S + ++L
Sbjct: 577 QRDGYNTADIEYIEDQKVQG-EDCAELMGLHNCVYEQASSWFHSLKSSLKN------RIL 629
Query: 410 NVEVMMPPSQ-DPE 422
N MP DP+
Sbjct: 630 NHFGPMPEKDADPQ 643
Score = 42 (19.8 bits), Expect = 1.7e-45, Sum P(3) = 1.7e-45
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 114 KSHLLKANALILLERYDMARDAILSGLQVDPFSNPLQASLQNL 156
K+H KA AL L + + A L + +D + +A Q L
Sbjct: 200 KAHFRKAQALATLGKVEEALREFLYCVSLDGKNKRARAEAQRL 242
Score = 39 (18.8 bits), Expect = 1.7e-45, Sum P(3) = 1.7e-45
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 53 PGDPIVLGNRSSAYIRISQF--LKHRPPSASEYRPL 86
P D ++ NRS Y + H A + RP+
Sbjct: 162 PNDHLLYSNRSQIYFTLESHEDALHDAEIACKLRPM 197
>ZFIN|ZDB-GENE-101021-4 [details] [associations]
symbol:lonrf1 "LON peptidase N-terminal domain and
ring finger 1" species:7955 "Danio rerio" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003111 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005
PROSITE:PS50089 PROSITE:PS50293 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-101021-4 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
GeneTree:ENSGT00440000033329 EMBL:FP016207 EMBL:FP085387
EMBL:FP101912 IPI:IPI00998181 Ensembl:ENSDART00000109935
Bgee:F1QKK1 Uniprot:F1QKK1
Length = 605
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 105/269 (39%), Positives = 153/269 (56%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVL--FITPRTCAVSVTL 234
DF+C LC++L YEP+TTPCGH+FC++C+ +S+D +CPLC+ L + R +V L
Sbjct: 312 DFECPLCIRLFYEPVTTPCGHTFCKNCIERSLDHNLRCPLCKQPLQEYFKNRKYNPTVLL 371
Query: 235 NSIIQKNFPEEYAERKSEHDS----LINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLM 290
I+ + FP++ AERK H++ L N D+ P+FV V P PLHIFEPRYRLM
Sbjct: 372 QEIMSRLFPQQLAERKQVHEAEMAELSNLTKDI-PIFVCTVAYPGIPCPLHIFEPRYRLM 430
Query: 291 VRRIME-GNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSW 349
+RR ME G + GM + G AD+ C ++I + + LPDGR +E RFR+LR
Sbjct: 431 MRRCMETGTKKFGMCSYEHGKG-FADYGCMLDILDLDLLPDGRSYVETLGGSRFRVLRRG 489
Query: 350 DQDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYARLW-LRREKESARQDRRRLEKL 408
+DGY A+IE+++D EG E LQ L ++ + AR W LR Q R+ +
Sbjct: 490 QRDGYHTADIEYLEDHKVEGAELEI-LQRLHDSVYQQAREWYLRLNSRIQDQISRQYGIM 548
Query: 409 LNVEVMMPPSQDPERFSFWLATLSDRRPS 437
E + S + + +WL ++ PS
Sbjct: 549 PEKEDNIQASANGPAWCWWLLSVLQLDPS 577
Score = 128 (50.1 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 28/68 (41%), Positives = 40/68 (58%)
Query: 179 DCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLFITP-RTCAVSVTLNSI 237
+C +CL L+ EP+T CGHSFCR C+ + ++CP C+ L + +V L SI
Sbjct: 3 ECPICLFLMCEPMTMSCGHSFCRRCMGAFLP--SRCPTCKERLKQRDAKNIKNNVLLFSI 60
Query: 238 IQKNFPEE 245
I+K PEE
Sbjct: 61 IEKCCPEE 68
>ZFIN|ZDB-GENE-081104-397 [details] [associations]
symbol:lonrf1l "LON peptidase N-terminal domain and
ring finger 1, like" species:7955 "Danio rerio" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003111 InterPro:IPR011990 Pfam:PF02190 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 ZFIN:ZDB-GENE-081104-397
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR013105
Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907
GO:GO:0004176 GeneTree:ENSGT00440000033329 EMBL:CR786572
EMBL:CU468725 EMBL:CU856174 IPI:IPI00996938 RefSeq:XP_003199128.1
UniGene:Dr.116034 Ensembl:ENSDART00000144516 GeneID:100317496
KEGG:dre:100317496 CTD:100317496 Uniprot:F1QJQ0
Length = 751
Score = 446 (162.1 bits), Expect = 9.9e-44, Sum P(2) = 9.9e-44
Identities = 91/223 (40%), Positives = 134/223 (60%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVL--FITPRTCAVSVT 233
+DF+C+LC++L Y+P+TTPCGH+FC +CL + +D +CPLC+ L ++ R V+
Sbjct: 453 NDFECSLCMRLFYQPVTTPCGHTFCTNCLERCLDHNPQCPLCKESLKEYLAFRKYTVTQV 512
Query: 234 LNSIIQKNFPEEYAERKSEHDSLINFGVDL---MPLFVMDVVIPCQRFPLHIFEPRYRLM 290
L++II+++ P+E++ER H DL +P+FV + P PLH+FEPRYRLM
Sbjct: 513 LDNIIKQHLPKEHSERVKLHAEETKELSDLTKNVPIFVCTMAYPTVPCPLHVFEPRYRLM 572
Query: 291 VRRIME-GNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSW 349
+RR ME G + GM I DP G V D C ++I LPDGR V++ +RF +L
Sbjct: 573 IRRCMETGTRQFGMCISDPQKGFV-DHGCMLQIRSVHFLPDGRSVVDTIGGKRFHVLSRG 631
Query: 350 DQDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYARLWLR 392
+DGY +A IE++QD ED LQ L + + AR W +
Sbjct: 632 MRDGYCIANIEYLQDTKVNDEEDLKKLQVLHDQVYDQARKWFQ 674
Score = 140 (54.3 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 46/150 (30%), Positives = 71/150 (47%)
Query: 117 LLKANALI----LLERYDMARDAILSG-LQVDPFSNPLQASLQNLERTTASLIGRRIHGT 171
LLKA AL L E DM A+ G ++ + S+ + L+N ++ + R
Sbjct: 41 LLKAEALASENRLKEAVDMFAMALRYGPVRPEQLSSLVGCVLRNFKKKSEESPAR---SE 97
Query: 172 PERTDD--FDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLFITPRTCA 229
P T D DC C + EP+T CGH++CR CL S ++C +C + P
Sbjct: 98 PNWTQDCELDCPGCHCFIAEPVTVTCGHTYCRRCLQHSTF--SQCKVCNEDIRRRPGEPR 155
Query: 230 VSVTLNSIIQKNFPEEYAERK--SEHDSLI 257
++V L ++ K FPE+ K E +SL+
Sbjct: 156 LNVILCGLLDKWFPEDVKRTKYLGEAESLL 185
Score = 44 (20.5 bits), Expect = 9.9e-44, Sum P(2) = 9.9e-44
Identities = 19/78 (24%), Positives = 31/78 (39%)
Query: 8 NEGEGSLPWDRYTHVFD---LVQKGNRAFRESNFEEAISNYSRANNIKPGDPIVLGNRSS 64
+E EG WD HV ++ K E+ +EA+ ++ A P P L +
Sbjct: 22 SETEGD--WDVDEHVDHRQLVLLKAEALASENRLKEAVDMFAMALRYGPVRPEQLSSLVG 79
Query: 65 AYIRISQFLKHRPPSASE 82
+R + P+ SE
Sbjct: 80 CVLRNFKKKSEESPARSE 97
>UNIPROTKB|B3KUN7 [details] [associations]
symbol:LONRF3 "LON peptidase N-terminal domain and RING
finger protein 3" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR003111
InterPro:IPR011990 Pfam:PF02190 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
EMBL:CH471161 HOGENOM:HOG000060199 HOVERGEN:HBG081924 EMBL:AL772284
UniGene:Hs.144266 HGNC:HGNC:21152 EMBL:AK097641 IPI:IPI00902452
SMR:B3KUN7 Ensembl:ENST00000422289 UCSC:uc004eqz.3 Uniprot:B3KUN7
Length = 503
Score = 439 (159.6 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 99/254 (38%), Positives = 142/254 (55%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLF--ITPRTCAVSVTL 234
D +C LC++L YEP+TTPCGH+FC CL + +D KCPLC+ L + R + +V +
Sbjct: 208 DLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVIM 267
Query: 235 NSIIQKNFPEEYAERKS----EHDSLINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLM 290
+I K PEE ER+ E + L N ++ P+FV + P PLHIFEP YRLM
Sbjct: 268 EELIAKFLPEELKERRKLYEEEMEELSNLNKNV-PIFVCTMAYPTVPCPLHIFEPCYRLM 326
Query: 291 VRRIME-GNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSW 349
+RR +E G + GM + DP G A++ C +EI + DGR V++ +RRFR+L
Sbjct: 327 IRRCIETGTRQFGMCLGDPVKG-FAEYGCILEIRNVQFFADGRSVVDSIGKRRFRVLHQS 385
Query: 350 DQDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYARLWLRREKESARQDRRRLEKLL 409
+DGY A+IE+++D +G ED A+L L N + A LW K S + ++L
Sbjct: 386 QRDGYNTADIEYIEDQKVQG-EDCAELMGLHNCVYQQASLWFHSLKLSLKN------RIL 438
Query: 410 NVEVMMPPSQ-DPE 422
N MP DP+
Sbjct: 439 NHFGPMPEKDADPQ 452
Score = 38 (18.4 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 114 KSHLLKANALILLERYDMARDAILSGLQVDPFSNPLQASLQNL 156
K+H KA AL L + + A L + +D + + Q L
Sbjct: 4 KAHFRKAQALATLGKVEEALREFLYCVSLDGKNKRARCEAQRL 46
>UNIPROTKB|F1P5G6 [details] [associations]
symbol:LONRF2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
Pfam:PF02190 PROSITE:PS50089 PROSITE:PS50293 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
OMA:KVMCEVL GeneTree:ENSGT00440000033329 EMBL:AADN02017710
EMBL:AADN02017711 EMBL:AADN02017712 IPI:IPI00585952
Ensembl:ENSGALT00000027073 Uniprot:F1P5G6
Length = 753
Score = 441 (160.3 bits), Expect = 7.7e-43, Sum P(2) = 7.7e-43
Identities = 99/253 (39%), Positives = 145/253 (57%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVL--FITPRTCAVSVTL 234
DF+C+LC++L YEP+TTPCGH+FC CL + +D CPLC+ L F+ RT +V
Sbjct: 457 DFECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNPHCPLCKEKLSEFLASRTYKKTVLT 516
Query: 235 NSIIQKNFPEEYAERKSEHDS----LINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLM 290
+I + PEE +ERK ++ L N D+ P+FV + P PLH+FEPRYRLM
Sbjct: 517 EELIVRYLPEELSERKKVYEEEMKELSNLNKDV-PIFVCTMAFPTIPCPLHVFEPRYRLM 575
Query: 291 VRRIME-GNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSW 349
+RR ME G + GM + D G AD C +EI + + PDGR V++ RRFR+L
Sbjct: 576 IRRCMETGTKQFGMCLADELKG-FADHGCILEIRDVKFFPDGRSVVDTVGVRRFRVLSHG 634
Query: 350 DQDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYARLWLRREKESARQDRRRLEKLL 409
+DGY A IE+++D EG E +L L ++ + A W ++ +D +++ +L
Sbjct: 635 QRDGYNTANIEYLEDKKVEGPEYE-ELVRLHDSVYDQAVAWF-----TSLKDNMKVQ-IL 687
Query: 410 NVEVMMPPSQDPE 422
N MP ++PE
Sbjct: 688 NHFGSMP-GKEPE 699
Score = 41 (19.5 bits), Expect = 7.7e-43, Sum P(2) = 7.7e-43
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 116 HLLKANALILLERYDMARDAILSGLQVDPFSNPLQASLQNL 156
H +KA AL LER + A L + ++P + ++ Q +
Sbjct: 264 HYVKAKALSGLERTEEALKEFLYCVALNPEWSSMKKEAQKI 304
>UNIPROTKB|Q17RB8 [details] [associations]
symbol:LONRF1 "LON peptidase N-terminal domain and RING
finger protein 1" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00028 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013105 Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 EMBL:AC123777 EMBL:AK074329
EMBL:AK297266 EMBL:AK300538 EMBL:BC004538 EMBL:BC117381
EMBL:BC117385 IPI:IPI00291662 IPI:IPI00872653 RefSeq:NP_689484.3
UniGene:Hs.180178 ProteinModelPortal:Q17RB8 SMR:Q17RB8
IntAct:Q17RB8 STRING:Q17RB8 PhosphoSite:Q17RB8 DMDM:257051033
PaxDb:Q17RB8 PRIDE:Q17RB8 Ensembl:ENST00000398246
Ensembl:ENST00000533751 GeneID:91694 KEGG:hsa:91694 UCSC:uc003wwd.1
CTD:91694 GeneCards:GC08M012579 HGNC:HGNC:26302 HPA:HPA023584
HPA:HPA024814 neXtProt:NX_Q17RB8 PharmGKB:PA128394743
eggNOG:COG2802 HOGENOM:HOG000060199 HOVERGEN:HBG081924
InParanoid:Q17RB8 OMA:GHSYCRR OrthoDB:EOG4WQ12B GenomeRNAi:91694
NextBio:77403 ArrayExpress:Q17RB8 Bgee:Q17RB8 CleanEx:HS_LONRF1
Genevestigator:Q17RB8 Uniprot:Q17RB8
Length = 773
Score = 439 (159.6 bits), Expect = 7.9e-43, Sum P(2) = 7.9e-43
Identities = 87/229 (37%), Positives = 138/229 (60%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVL--FITPRTCAVSVTL 234
DF+C+LC++L +EP+TTPCGHSFC++CL + +D CPLC+ L ++ R V+ L
Sbjct: 476 DFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHAPYCPLCKESLKEYLADRRYCVTQLL 535
Query: 235 NSIIQKNFPEEYAERKSEHD---SLINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLMV 291
+I K P+E +ERK +D + ++ +P+FV + P PLH+FEPRYRLM+
Sbjct: 536 EELIVKYLPDELSERKKIYDEETAELSHLTKNVPIFVCTMAYPTVPCPLHVFEPRYRLMI 595
Query: 292 RR-IMEGNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSWD 350
RR I G + GM + D T S AD+ C ++I LPDGR V++ +RFR+L+
Sbjct: 596 RRSIQTGTKQFGMCVSD-TQNSFADYGCMLQIRNVHFLPDGRSVVDTVGGKRFRVLKRGM 654
Query: 351 QDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYARLWLRREKESAR 399
+DGY A+IE+++D+ E ++ +L++L + A W + ++ R
Sbjct: 655 KDGYCTADIEYLEDVKVENEDEIKNLRELHDLVYSQACSWFQNLRDRFR 703
Score = 44 (20.5 bits), Expect = 7.9e-43, Sum P(2) = 7.9e-43
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 35 ESNFEEAISNYSRANNIKPGDPIVLGNRSSAYIRISQF 72
+ + EA++ A +P D IV R+ +Y + +F
Sbjct: 224 QGRYREALAAACEALRAEPSDLIVKIYRAESYAGLQEF 261
>UNIPROTKB|Q1L5Z9 [details] [associations]
symbol:LONRF2 "LON peptidase N-terminal domain and RING
finger protein 2" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00028 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 EMBL:AC012493 GO:GO:0004176 eggNOG:COG2802
HOGENOM:HOG000060199 HOVERGEN:HBG081924 EMBL:DQ020495 EMBL:AK127206
EMBL:AC104782 EMBL:BC101664 EMBL:BC101662 IPI:IPI00394812
IPI:IPI00827614 RefSeq:NP_940863.3 UniGene:Hs.21380
ProteinModelPortal:Q1L5Z9 SMR:Q1L5Z9 IntAct:Q1L5Z9 STRING:Q1L5Z9
PhosphoSite:Q1L5Z9 DMDM:126215737 PaxDb:Q1L5Z9 PRIDE:Q1L5Z9
Ensembl:ENST00000393437 Ensembl:ENST00000409647 GeneID:164832
KEGG:hsa:164832 UCSC:uc002tal.4 CTD:164832 GeneCards:GC02M100889
H-InvDB:HIX0024130 HGNC:HGNC:24788 neXtProt:NX_Q1L5Z9
PharmGKB:PA142671540 InParanoid:Q1L5Z9 OMA:KVMCEVL
OrthoDB:EOG4BK538 ChiTaRS:LONRF2 GenomeRNAi:164832 NextBio:88502
Bgee:Q1L5Z9 CleanEx:HS_LONRF2 Genevestigator:Q1L5Z9 Uniprot:Q1L5Z9
Length = 754
Score = 416 (151.5 bits), Expect = 2.3e-42, Sum P(3) = 2.3e-42
Identities = 93/253 (36%), Positives = 143/253 (56%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVL--FITPRTCAVSVTL 234
DF+C LC++LL+EP+TTPCGH+FC CL + +D CPLC+ L + R ++V
Sbjct: 446 DFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKDKLSELLASRNFNITVLA 505
Query: 235 NSIIQKNFPEEYAERKSEHDS----LINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLM 290
+I + P+E ++RK +D L N D+ P+FV + P PLH+FEPRYRLM
Sbjct: 506 EELIFRYLPDELSDRKRIYDEEMSELSNLTRDV-PIFVCAMAFPTVPCPLHVFEPRYRLM 564
Query: 291 VRRIME-GNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSW 349
+RR ME G R GM + G ++++ C +EI + PDG V++ RFR+L
Sbjct: 565 IRRCMETGTKRFGMCLSAEHAG-LSEYGCMLEIKDVRTFPDGSSVVDAIGISRFRVLSHR 623
Query: 350 DQDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYARLWLRREKESARQDRRRLEKLL 409
+DGY A+IE+++D EG E +L L ++ + + W ++ QDR + + L
Sbjct: 624 HRDGYNTADIEYLEDEKVEGPEYE-ELAALHDSVHQQSVSWF-----ASLQDRMKEQILS 677
Query: 410 NVEVMMPPSQDPE 422
+ VM P ++PE
Sbjct: 678 HFGVM--PDREPE 688
Score = 41 (19.5 bits), Expect = 2.3e-42, Sum P(3) = 2.3e-42
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 17 DRYTHVFDLVQKGNRAFRESNFEEA 41
DR + +++G+ AFR ++E A
Sbjct: 18 DRAEPIAQRLEEGDEAFRAGDYEMA 42
Score = 40 (19.1 bits), Expect = 2.3e-42, Sum P(3) = 2.3e-42
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 113 MKSHLLKANALILLERYDMARDAILSGLQVDPFSNPLQASLQNL 156
+K H +KA AL L R L L ++P N ++ Q +
Sbjct: 265 IKGHQVKAQALSGLGRSKEVLKEFLYCLALNPECNSVKKEAQKV 308
>UNIPROTKB|J9P3L7 [details] [associations]
symbol:LONRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR003111 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00028 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013105 Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 OMA:GHSYCRR
GeneTree:ENSGT00440000033329 EMBL:AAEX03010436 EMBL:AAEX03010437
Ensembl:ENSCAFT00000047804 Uniprot:J9P3L7
Length = 769
Score = 438 (159.2 bits), Expect = 5.3e-42, Sum P(2) = 5.3e-42
Identities = 88/229 (38%), Positives = 137/229 (59%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVL--FITPRTCAVSVTL 234
DF+C+LC++L +EP+TTPCGHSFC++CL + +D CPLC+ L ++ R V+ L
Sbjct: 472 DFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHTPYCPLCKESLKEYLADRRYCVTQLL 531
Query: 235 NSIIQKNFPEEYAERKSEHD---SLINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLMV 291
+I K P+E +ERK +D + ++ +P+FV + P PLH+FEPRYRLM+
Sbjct: 532 EELIVKYLPDELSERKKIYDEETAELSHLTKNVPIFVCTMAYPTVPCPLHVFEPRYRLMI 591
Query: 292 RR-IMEGNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSWD 350
RR I G + GM + D T S AD+ C ++I LPDGR V++ +RFR+L+
Sbjct: 592 RRSIQTGTKQFGMCVSD-TQNSFADYGCMLQIRNVHFLPDGRSVVDTVGGKRFRVLKRGM 650
Query: 351 QDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYARLWLRREKESAR 399
+DGY A+IE+++D+ E E+ +L+ L + A W + ++ R
Sbjct: 651 KDGYCTADIEYLEDVKVENEEEIKNLRQLHDLVYSQACSWFQNLRDRFR 699
Score = 37 (18.1 bits), Expect = 5.3e-42, Sum P(2) = 5.3e-42
Identities = 8/38 (21%), Positives = 18/38 (47%)
Query: 35 ESNFEEAISNYSRANNIKPGDPIVLGNRSSAYIRISQF 72
+ + EA++ A +P D + R+ +Y + +F
Sbjct: 220 QGRYREALAAACEALRAEPSDVTLKIYRAESYAGLQEF 257
>RGD|1562583 [details] [associations]
symbol:Lonrf1 "LON peptidase N-terminal domain and ring finger
1" species:10116 "Rattus norvegicus" [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 Pfam:PF02190 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00184 Pfam:PF00097 RGD:1562583
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
GeneTree:ENSGT00440000033329 IPI:IPI00358818
Ensembl:ENSRNOT00000015142 Uniprot:F1LWE5
Length = 820
Score = 436 (158.5 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 87/229 (37%), Positives = 137/229 (59%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVL--FITPRTCAVSVTL 234
DF+C+LC++L +EP+TTPCGHSFC++CL + +D CPLC+ L ++ R V+ L
Sbjct: 523 DFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHAPYCPLCKESLKEYLADRRYCVTQLL 582
Query: 235 NSIIQKNFPEEYAERKSEHD---SLINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLMV 291
+I K P+E +ERK +D + ++ +P+FV + P PLH+FEPRYRLM+
Sbjct: 583 EDLIVKYLPDELSERKKIYDEETAELSHLTKNVPIFVCTMAYPTVPCPLHVFEPRYRLMI 642
Query: 292 RR-IMEGNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSWD 350
RR I G + GM + D T S AD+ C ++I LPDGR V++ +RFR+L+
Sbjct: 643 RRSIQTGTKQFGMCVSD-TQNSFADYGCMLQIRNVHFLPDGRSVVDTVGGKRFRVLKRGM 701
Query: 351 QDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYARLWLRREKESAR 399
+DGY A+IE+++D+ E ++ L++L + A W + ++ R
Sbjct: 702 KDGYCTADIEYLEDVKIENGDEIRSLRELHDLVYSQACSWFQNLRDRFR 750
Score = 37 (18.1 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 35 ESNFEEAISNYSRANNIKPGDPIVLGNRSSAYIRISQF 72
E + EA++ A +P D + R+ +Y + +F
Sbjct: 271 EGRYREALAAACDALRAEPSDLTLKIYRAESYAGLQEF 308
>UNIPROTKB|H7C5V9 [details] [associations]
symbol:LONRF1 "LON peptidase N-terminal domain and RING
finger protein 1" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR003111 Pfam:PF02190
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
EMBL:AC123777 HGNC:HGNC:26302 Ensembl:ENST00000524526 Bgee:H7C5V9
Uniprot:H7C5V9
Length = 376
Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 87/229 (37%), Positives = 138/229 (60%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVL--FITPRTCAVSVTL 234
DF+C+LC++L +EP+TTPCGHSFC++CL + +D CPLC+ L ++ R V+ L
Sbjct: 79 DFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHAPYCPLCKESLKEYLADRRYCVTQLL 138
Query: 235 NSIIQKNFPEEYAERKSEHD---SLINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLMV 291
+I K P+E +ERK +D + ++ +P+FV + P PLH+FEPRYRLM+
Sbjct: 139 EELIVKYLPDELSERKKIYDEETAELSHLTKNVPIFVCTMAYPTVPCPLHVFEPRYRLMI 198
Query: 292 RR-IMEGNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSWD 350
RR I G + GM + D T S AD+ C ++I LPDGR V++ +RFR+L+
Sbjct: 199 RRSIQTGTKQFGMCVSD-TQNSFADYGCMLQIRNVHFLPDGRSVVDTVGGKRFRVLKRGM 257
Query: 351 QDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYARLWLRREKESAR 399
+DGY A+IE+++D+ E ++ +L++L + A W + ++ R
Sbjct: 258 KDGYCTADIEYLEDVKVENEDEIKNLRELHDLVYSQACSWFQNLRDRFR 306
>UNIPROTKB|E1B964 [details] [associations]
symbol:LOC100849413 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
Pfam:PF02190 PROSITE:PS50089 PROSITE:PS50293 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
CTD:91694 OMA:GHSYCRR GeneTree:ENSGT00440000033329
EMBL:DAAA02060368 IPI:IPI00703913 RefSeq:XP_002698738.1
ProteinModelPortal:E1B964 Ensembl:ENSBTAT00000012816 GeneID:504489
KEGG:bta:504489 NextBio:20866687 Uniprot:E1B964
Length = 638
Score = 436 (158.5 bits), Expect = 6.4e-41, P = 6.4e-41
Identities = 88/229 (38%), Positives = 137/229 (59%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVL--FITPRTCAVSVTL 234
DF+C+LC++L +EP+TTPCGHSFC++CL + +D CPLC+ L ++ R V+ L
Sbjct: 341 DFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHTPYCPLCKESLKEYLADRRYCVTQLL 400
Query: 235 NSIIQKNFPEEYAERKSEHD---SLINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLMV 291
+I K P+E +ERK +D + ++ +P+FV + P PLH+FEPRYRLM+
Sbjct: 401 EDLIVKYLPDELSERKKIYDEETAELSHLTKNVPIFVCTMAYPTVPCPLHVFEPRYRLMI 460
Query: 292 RR-IMEGNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSWD 350
RR I G + GM + D T S AD+ C ++I LPDGR V++ +RFR+L+
Sbjct: 461 RRSIQTGTKQFGMCVSD-TQNSFADYGCMLQIRNVHFLPDGRSVVDTVGGKRFRVLKRGM 519
Query: 351 QDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYARLWLRREKESAR 399
+DGY A+IE+++DI E ++ +L+ L + A W + ++ R
Sbjct: 520 KDGYCTADIEYLEDIKVENEDEIENLRQLHDLVYSQACSWFQNLRDRFR 568
>UNIPROTKB|I3LT33 [details] [associations]
symbol:LONRF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00028 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR013105
Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907
GO:GO:0004176 GeneTree:ENSGT00440000033329 EMBL:CU638828
Ensembl:ENSSSCT00000027883 Uniprot:I3LT33
Length = 717
Score = 437 (158.9 bits), Expect = 1.4e-40, P = 1.4e-40
Identities = 102/302 (33%), Positives = 162/302 (53%)
Query: 110 SNSMKSHLLKANALILLERYDM-ARDAILSGLQVDPFSNPLQAS-LQNLERTTASLIGRR 167
S +K L +A + + DM R+ L + +P + + L +E +
Sbjct: 347 SEPVKGSLNRAQSAQAINSTDMPVREDCLKRVSSEPLLSVQEKGVLLKIETPSEVCTFSL 406
Query: 168 IHGT-PER---TDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVL-- 221
G PE DF+C+LC++L +EP+TTPCGHSFC++CL + +D CPLC+ L
Sbjct: 407 TCGDIPEELIDASDFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHTPYCPLCKESLKE 466
Query: 222 FITPRTCAVSVTLNSIIQKNFPEEYAERKSEHD---SLINFGVDLMPLFVMDVVIPCQRF 278
++ R V+ L +I K P+E +ERK +D + ++ +P+FV + P
Sbjct: 467 YLADRRYCVTQLLEDLIVKYLPDELSERKKIYDEETAELSHLTKNVPIFVCTMAYPTVPC 526
Query: 279 PLHIFEPRYRLMVRR-IMEGNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEI 337
PLHIFEPRYRLM+RR I G + GM + D T S AD+ C ++I LPDGR V++
Sbjct: 527 PLHIFEPRYRLMIRRSIQTGTKQFGMCVSD-TQNSFADYGCMLQIRNVHFLPDGRSVVDT 585
Query: 338 ESRRRFRILRSWDQDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYARLWLRREKES 397
+RFR+L+ +DGY A+IE+++D+ E ++ +L+ L + A W + ++
Sbjct: 586 VGGKRFRVLKRGMKDGYCTADIEYLEDVKVENEDEIENLRQLHDLVYSQACSWFQNLRDR 645
Query: 398 AR 399
R
Sbjct: 646 FR 647
>UNIPROTKB|F1SEU6 [details] [associations]
symbol:LONRF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00028 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR013105
Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907
GO:GO:0004176 OMA:GHSYCRR GeneTree:ENSGT00440000033329
EMBL:CU638828 Ensembl:ENSSSCT00000007633 Uniprot:F1SEU6
Length = 770
Score = 436 (158.5 bits), Expect = 2.5e-40, P = 2.5e-40
Identities = 88/229 (38%), Positives = 137/229 (59%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVL--FITPRTCAVSVTL 234
DF+C+LC++L +EP+TTPCGHSFC++CL + +D CPLC+ L ++ R V+ L
Sbjct: 473 DFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHTPYCPLCKESLKEYLADRRYCVTQLL 532
Query: 235 NSIIQKNFPEEYAERKSEHD---SLINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLMV 291
+I K P+E +ERK +D + ++ +P+FV + P PLHIFEPRYRLM+
Sbjct: 533 EDLIVKYLPDELSERKKIYDEETAELSHLTKNVPIFVCTMAYPTVPCPLHIFEPRYRLMI 592
Query: 292 RR-IMEGNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSWD 350
RR I G + GM + D T S AD+ C ++I LPDGR V++ +RFR+L+
Sbjct: 593 RRSIQTGTKQFGMCVSD-TQNSFADYGCMLQIRNVHFLPDGRSVVDTVGGKRFRVLKRGM 651
Query: 351 QDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYARLWLRREKESAR 399
+DGY A+IE+++D+ E ++ +L+ L + A W + ++ R
Sbjct: 652 KDGYCTADIEYLEDVKVENEDEIENLRQLHDLVYSQACSWFQNLRDRFR 700
>UNIPROTKB|F1P3J6 [details] [associations]
symbol:Gga.40071 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
Pfam:PF02190 PROSITE:PS50089 PROSITE:PS50293 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
OMA:GHSYCRR GeneTree:ENSGT00440000033329 EMBL:AADN02031324
IPI:IPI00597781 Ensembl:ENSGALT00000022307 Uniprot:F1P3J6
Length = 597
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 87/229 (37%), Positives = 132/229 (57%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVL--FITPRTCAVSVTL 234
DF+C+LC++L +EP+TTPCGH+FC+ CL + +D +CPLC+ L ++ R +++ L
Sbjct: 300 DFECSLCMRLFFEPVTTPCGHTFCKGCLERCLDHAPQCPLCKESLKEYLASRKYSITELL 359
Query: 235 NSIIQKNFPEEYAERKSEHDSLINFGVDL---MPLFVMDVVIPCQRFPLHIFEPRYRLMV 291
+I K +E ERK H +L +P+FV + P PLH+FEPRYRLM+
Sbjct: 360 EELIMKYLSDELYERKRIHAEETAEHSNLTKNVPMFVCTMAYPTVPCPLHVFEPRYRLMI 419
Query: 292 RRIME-GNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSWD 350
RR ME G + GM I D G AD+ C ++I LPDGR V++ +RFR+L+
Sbjct: 420 RRSMETGTKQFGMCISDSQNG-FADYGCMLQIRNVHFLPDGRSVVDTVGGKRFRVLQRGM 478
Query: 351 QDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYARLWLRREKESAR 399
+DGY A+IE+++D+ E+ L++L N A W + + R
Sbjct: 479 KDGYCTADIEYLEDVKVADEEELKKLRELHNFVYSQACSWFQNLRNKFR 527
Score = 118 (46.6 bits), Expect = 0.00083, P = 0.00083
Identities = 30/76 (39%), Positives = 40/76 (52%)
Query: 180 CTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLFITPRTCAV------SVT 233
C C + L EP+T PCGH++CR CL + + R +C CR L T A SV
Sbjct: 3 CCGCGRFLSEPVTVPCGHTYCRRCLRREL-RA-RCRRCRDWLLPAGGTSAAAAPLRTSVV 60
Query: 234 LNSIIQKNFPEEYAER 249
L+ + +K FP E ER
Sbjct: 61 LSQLAEKWFPRE-CER 75
>UNIPROTKB|F1NWA3 [details] [associations]
symbol:F1NWA3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR003111 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00028 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013105 Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 GeneTree:ENSGT00440000033329
EMBL:AADN02028660 IPI:IPI00587294 Ensembl:ENSGALT00000006484
OMA:ILEAEGM Uniprot:F1NWA3
Length = 579
Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
Identities = 99/269 (36%), Positives = 149/269 (55%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVL--FITPRTCAVSVTL 234
D +C+LC+++ +EP+TTPCGH+FC+ CL + +D CPLC+ L ++ + + +V L
Sbjct: 285 DLECSLCIRMFFEPVTTPCGHTFCKECLERCLDHRPNCPLCKQSLREYLKAGSYSPTVLL 344
Query: 235 NSIIQKNFPEEYAERKSEHDS----LINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLM 290
I+ FP + AER+ H + L N ++ P+FV + P PLHIFEPRYRLM
Sbjct: 345 QDIMLAAFPAQLAERRELHRAEMAELSNLTTNI-PIFVCTMSFPGVACPLHIFEPRYRLM 403
Query: 291 VRRIME-GNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSW 349
+RR E G R GM I + S AD+ C +EI + E L DGR +++ RRFR+LR
Sbjct: 404 IRRCQETGTRRFGMCIYE-NGKSFADYGCMLEIWQLELLADGRSLVDTIGGRRFRVLRRG 462
Query: 350 DQDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYA-RLWLRREKESARQDRRRLEKL 408
+DGY A+IE+++D G E+ +LQ L + + A R W + S R + L
Sbjct: 463 HRDGYNTADIEYLEDKKVAG-EELQELQSLHESTYQLAQRFWEHGDVAS-RHLLLQHGPL 520
Query: 409 LNVEVMMPPSQDPERFSFWLATLSDRRPS 437
E + S D + +WL ++ PS
Sbjct: 521 PEKEEDIQASADGPTWCWWLISILPLDPS 549
>ZFIN|ZDB-GENE-030131-8303 [details] [associations]
symbol:si:ch1073-440b2.1 "si:ch1073-440b2.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003111 InterPro:IPR007110 InterPro:IPR011990
Pfam:PF02190 PROSITE:PS50089 PROSITE:PS50835 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-030131-8303 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 GeneTree:ENSGT00440000033329
EMBL:CU459183 EMBL:CU915565 IPI:IPI00836275
Ensembl:ENSDART00000129204 Uniprot:E7EYP4
Length = 488
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 83/230 (36%), Positives = 131/230 (56%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVL--FITPRTCAVSVTL 234
DF+C+LC++L YEP+TTPCGH+FC CL + +D CPLC+ L ++ R ++ +
Sbjct: 192 DFECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNPNCPLCKENLSEYLATRAYCKTLLI 251
Query: 235 NSIIQKNFPEEYAERKSEHDS----LINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLM 290
++Q+ +E ER+ ++ L N ++ P+FV + P PLH+FEPRYRLM
Sbjct: 252 EELLQQYLSDELTERRKVYEEEMKELSNLNQEV-PIFVCTMAFPTIPCPLHVFEPRYRLM 310
Query: 291 VRRIME-GNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSW 349
+RR +E G + GM I D G AD C + + + + PDGR V++ RF++L
Sbjct: 311 IRRSLETGTKQFGMCIADELKG-FADHGCMLAVRDVKFFPDGRSVVDTIGIARFKVLSHG 369
Query: 350 DQDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYARLWLRREKESAR 399
+DGY A+IE+++D EG ED +L L ++ + A W K+ +
Sbjct: 370 QRDGYHTAKIEYLEDKKAEG-EDLTELLKLHDSVYDQAMAWFTSLKDDMK 418
>UNIPROTKB|F1PPT8 [details] [associations]
symbol:LONRF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00028 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 GeneTree:ENSGT00440000033329
EMBL:AAEX03007441 OMA:ELANTRW Ensembl:ENSCAFT00000003510
Uniprot:F1PPT8
Length = 820
Score = 400 (145.9 bits), Expect = 3.0e-38, Sum P(2) = 3.0e-38
Identities = 94/270 (34%), Positives = 148/270 (54%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVL--FITPRTCAVSVTL 234
DF+C LC++LL+EP+TTPCGH+FC CL + +D CPLC+ L + R +++
Sbjct: 456 DFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKEKLSELLASRNFNITILA 515
Query: 235 NSIIQKNFPEEYAERKSEHDS----LINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLM 290
+I + +E ++RK +D L N D+ P+FV + P PLH+FEPRYRLM
Sbjct: 516 EELIFRYLSDELSDRKRIYDEEMTELSNLTRDV-PIFVCAMAFPTVPCPLHVFEPRYRLM 574
Query: 291 VRRIME-GNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSW 349
+RR ME G R GM + G ++++ C +EI + PDG V++ RFR+L
Sbjct: 575 IRRCMETGTKRFGMCLSAEHAG-ISEYGCMLEIKDVRTFPDGSSVVDAIGISRFRVLSHR 633
Query: 350 DQDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYARLWLRREKESARQDRRRLEKLL 409
+DGY A+IE+++D EG +L L ++ + + W ++ QD + E++L
Sbjct: 634 HRDGYNTADIEYLEDEKVEGPAYE-ELTSLHDSVYQQSVSWF-----TSLQDHMK-EQIL 686
Query: 410 NVEVMMP-----PSQDPE--RFSFW-LATL 431
+ +MP P +P +S+W LA L
Sbjct: 687 SHFGLMPDRESEPQSNPSGPAWSWWILAVL 716
Score = 43 (20.2 bits), Expect = 3.0e-38, Sum P(2) = 3.0e-38
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 114 KSHLLKANALILLERYDMARDAILSGLQVDPFSNPLQASLQNL 156
K H +KA AL L R L L ++P N ++ +Q +
Sbjct: 269 KGHHVKAQALSALGRSKEVLKEFLYCLALNPECNSVKKEVQKV 311
>RGD|1562137 [details] [associations]
symbol:Lonrf2 "LON peptidase N-terminal domain and ring finger
2" species:10116 "Rattus norvegicus" [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003111 InterPro:IPR011990
Pfam:PF02190 PROSITE:PS50089 SMART:SM00184 RGD:1562137
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
OMA:KVMCEVL OrthoDB:EOG4BK538 GeneTree:ENSGT00440000033329
IPI:IPI00362200 Ensembl:ENSRNOT00000033964 UCSC:RGD:1562137
Uniprot:D3ZX48
Length = 517
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 90/252 (35%), Positives = 140/252 (55%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVL--FITPRTCAVSVTL 234
DF+C LC++LL+EP+TTPCGH+FC CL + +D CPLC+ L + R V+V
Sbjct: 209 DFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKDKLSELLATRNFNVTVLT 268
Query: 235 NSIIQKNFPEEYAERKSEHDSLINFGVDL---MPLFVMDVVIPCQRFPLHIFEPRYRLMV 291
+I + P+E ++RK +D ++ L +P+FV + P PLH+FEPRYRLM+
Sbjct: 269 EELIFRYLPDELSDRKRVYDEEMSELSHLTRDVPIFVCAMAFPTVPCPLHVFEPRYRLMI 328
Query: 292 RRIME-GNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSWD 350
RR ME G R GM + G ++++ C +EI + PDG V++ RFR+L
Sbjct: 329 RRCMETGTKRFGMCLSAENAG-ISEYGCMLEIKDVRTFPDGSSVVDAVGISRFRVLSHRH 387
Query: 351 QDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYARLWLRREKESARQDRRRLEKLLN 410
+DGY A+IE+++D EG E +L L + + + W ++ QD + + L +
Sbjct: 388 RDGYNTADIEYLEDEKVEGAEFE-ELTALHESVYQQSVSWF-----ASLQDHMKKQILSH 441
Query: 411 VEVMMPPSQDPE 422
M P ++PE
Sbjct: 442 FGSM--PDREPE 451
>ASPGD|ASPL0000000141 [details] [associations]
symbol:AN5961 species:162425 "Emericella nidulans"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003111 Pfam:PF02190 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 EMBL:BN001301 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AACD01000101 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 eggNOG:COG2802 OrthoDB:EOG437VPJ
RefSeq:XP_663565.1 ProteinModelPortal:Q5B0G9
EnsemblFungi:CADANIAT00007064 GeneID:2870893 KEGG:ani:AN5961.2
HOGENOM:HOG000163327 OMA:DCQVCYS Uniprot:Q5B0G9
Length = 623
Score = 331 (121.6 bits), Expect = 3.2e-29, P = 3.2e-29
Identities = 74/203 (36%), Positives = 116/203 (57%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLFI--TPRTCAVSVT 233
++ DC +C L+ +P+TTPCGH+FCR C+ ++ N CP+CR L + + R+ + +
Sbjct: 200 NELDCQVCYSLILDPLTTPCGHTFCRRCVAMALSHSNLCPICRRKLNMPSSVRSERNNKS 259
Query: 234 LNSIIQKNFPEEYAERKSEHDSLINFGVD-LMPLFVMDVVIPCQRFPLHIFEPRYRLMVR 292
L+ II+ P+E A R+++ S I + +PL V+ + P LHIFEPRYRLM++
Sbjct: 260 LSDIIETLLPDEVASRRADVASNIELNSEGKLPLAVVSLAFPTMPIGLHIFEPRYRLMIQ 319
Query: 293 RIME-GNHRMGMVI------IDPTTGSVA--DFACEVEITECEPLPDGRFVLEIESRRRF 343
R+ME G+ + GMV+ + G + + I E LPDGR +L RF
Sbjct: 320 RVMESGSRKFGMVMPNRRGHLQQGLGRAPFMRYGTILAINRHELLPDGRSLLIATGTSRF 379
Query: 344 RILRSWDQ-DGYRVAEIEWVQDI 365
++L SW+ DGY V +I+ V D+
Sbjct: 380 KVL-SWELVDGYHVGKIQRVDDV 401
>UNIPROTKB|K7GRY6 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006508 "proteolysis" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] InterPro:IPR003111
Pfam:PF02190 InterPro:IPR015947 SUPFAM:SSF88697
GeneTree:ENSGT00440000033329 EMBL:CU928929
Ensembl:ENSSSCT00000032882 Uniprot:K7GRY6
Length = 203
Score = 279 (103.3 bits), Expect = 3.4e-24, P = 3.4e-24
Identities = 71/195 (36%), Positives = 103/195 (52%)
Query: 234 LNSIIQKNFPEEYAERK----SEHDSLINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRL 289
+ +I K PEE ER+ E + L N ++ P+FV + P PLHIFEP YRL
Sbjct: 1 MEELIAKFLPEELKERRRLYEEEMEELSNLNKNV-PIFVCTMAYPTVPCPLHIFEPCYRL 59
Query: 290 MVRRIME-GNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRS 348
M+RR +E G + GM + DP G A++ C +EI + DGR V++ +RRF++L
Sbjct: 60 MIRRCIETGTRQFGMCLGDPVKG-FAEYGCILEIRNVQFFADGRSVVDSIGKRRFKVLHQ 118
Query: 349 WDQDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYARLWLRREKESARQDRRRLEKL 408
+DGY A+IE+++D +G ED A+L L N E A W K S + ++
Sbjct: 119 GQRDGYNTADIEYIEDQKVQG-EDCAELMGLHNCVYEQASSWFHSLKSSLKN------RI 171
Query: 409 LNVEVMMPPSQ-DPE 422
LN MP DP+
Sbjct: 172 LNHFGPMPEKDADPQ 186
>FB|FBgn0052369 [details] [associations]
symbol:CG32369 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF02190 PROSITE:PS50089 PROSITE:PS50293 SMART:SM00028
SMART:SM00184 Prosite:PS00518 EMBL:AE014296 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 GeneTree:ENSGT00440000033329
FlyBase:FBgn0052369 UniGene:Dm.33514 GeneID:38873
KEGG:dme:Dmel_CG32369 GenomeRNAi:38873 NextBio:810801
RefSeq:NP_001246660.1 RefSeq:NP_729296.1 ProteinModelPortal:Q9VSB2
SMR:Q9VSB2 MINT:MINT-298560 EnsemblMetazoa:FBtr0076783
EnsemblMetazoa:FBtr0304992 UCSC:CG32369-RA InParanoid:Q9VSB2
OMA:VEYICDE PhylomeDB:Q9VSB2 ArrayExpress:Q9VSB2 Bgee:Q9VSB2
Uniprot:Q9VSB2
Length = 1066
Score = 176 (67.0 bits), Expect = 3.1e-21, Sum P(3) = 3.1e-21
Identities = 60/210 (28%), Positives = 101/210 (48%)
Query: 230 VSVTLNSIIQKNFPEEYAER-KSEHDSLINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYR 288
V+ L + +++ P+ Y R + E D + +P+F+ P PL + EPRYR
Sbjct: 772 VTKFLEAAMKRFIPDHYEARFRQEIDQEPS-----VPVFICTAAFPAVPCPLFVCEPRYR 826
Query: 289 LMVRRIME-GNHRMGMVIIDPTTGSVA--DFACEVEITECEPLPDGRFVLEIESRRRFRI 345
LMVRR +E G+ G I+ P G D ++I +C L DG +L +RF+I
Sbjct: 827 LMVRRAVESGDKTFG--IVQPNGGKSRYYDVGTILDIRDCVQLGDGCSILSTIGCKRFKI 884
Query: 346 LRSWDQDGYRVAEIEWVQD--IHPEGVEDRADLQDLT-NNAAEYARLWLRREKESARQDR 402
L ++DGY A++E++ D I E V+ A +Q + A+E+ +K Q
Sbjct: 885 LARNEKDGYETAKVEYICDEPIADEQVKILAGMQGVVLAKASEWFESLSTEQKHEILQSF 944
Query: 403 RRLEKLL-NVEVMMPPSQDPERFSFWLATL 431
++ L N E++ D +++W+ L
Sbjct: 945 GQMPPLEPNWELI----SDGPAWAWWIIAL 970
Score = 162 (62.1 bits), Expect = 3.1e-21, Sum P(3) = 3.1e-21
Identities = 31/86 (36%), Positives = 50/86 (58%)
Query: 136 ILSGLQVDPFSNPLQASLQNLERTTASLIGRRIHGTPERTDDFDCTLCLKLLYEPITTPC 195
+ +G+ +D LQ L+ L+++ SL + G DFDC +C + L++P+ TPC
Sbjct: 646 LFAGV-LDRTQQELQR-LKKLDKSAPSLAVSSVAGQLIDASDFDCVVCSRTLWKPVVTPC 703
Query: 196 GHSFCRSCLFQSMDRGNKCPLCRAVL 221
GH++C CL + MD + CPLC + L
Sbjct: 704 GHTYCLVCLDRCMDYNSPCPLCMSPL 729
Score = 102 (41.0 bits), Expect = 4.4e-15, Sum P(3) = 4.4e-15
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 167 RIHGTPERTDDFD---CTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLFI 223
R+ + +DFD C LC +L P+TT CGH+FCR C +++ + N C + +
Sbjct: 167 RVPSPLQDLEDFDPLMCPLCSDILRCPVTTNCGHTFCRQCC-ETITQCNICQVRFPRIQA 225
Query: 224 T---PRTCAVSVTLNS 236
+ P CA++ T S
Sbjct: 226 SSPGPPVCALTTTTAS 241
Score = 40 (19.1 bits), Expect = 8.4e-09, Sum P(3) = 8.4e-09
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 214 CPLCRAVLF--ITP-------RTCAVSVTLNSIIQKNFP 243
CPLC +L +T R C ++T +I Q FP
Sbjct: 183 CPLCSDILRCPVTTNCGHTFCRQCCETITQCNICQVRFP 221
Score = 38 (18.4 bits), Expect = 3.1e-21, Sum P(3) = 3.1e-21
Identities = 5/8 (62%), Positives = 6/8 (75%)
Query: 14 LPWDRYTH 21
+PW RY H
Sbjct: 122 MPWSRYHH 129
>UNIPROTKB|E9PQH4 [details] [associations]
symbol:LONRF1 "LON peptidase N-terminal domain and RING
finger protein 1" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] InterPro:IPR003111 Pfam:PF02190
GO:GO:0006508 InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0004176
EMBL:AC123777 HGNC:HGNC:26302 IPI:IPI00976260
ProteinModelPortal:E9PQH4 Ensembl:ENST00000525024
ArrayExpress:E9PQH4 Bgee:E9PQH4 Uniprot:E9PQH4
Length = 199
Score = 235 (87.8 bits), Expect = 3.2e-19, P = 3.2e-19
Identities = 49/128 (38%), Positives = 77/128 (60%)
Query: 273 IPCQRFPLHIFEPRYRLMVRR-IMEGNHRMGMVIIDPTTGSVADFACEVEITECEPLPDG 331
+PC PLH+FEPRYRLM+RR I G + GM + D T S AD+ C ++I LPDG
Sbjct: 6 VPC---PLHVFEPRYRLMIRRSIQTGTKQFGMCVSD-TQNSFADYGCMLQIRNVHFLPDG 61
Query: 332 RFVLEIESRRRFRILRSWDQDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYARLWL 391
R V++ +RFR+L+ +DGY A+IE+++D+ E ++ +L++L + A W
Sbjct: 62 RSVVDTVGGKRFRVLKRGMKDGYCTADIEYLEDVKVENEDEIKNLRELHDLVYSQACSWF 121
Query: 392 RREKESAR 399
+ ++ R
Sbjct: 122 QNLRDRFR 129
>UNIPROTKB|I3LGG6 [details] [associations]
symbol:I3LGG6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006508 "proteolysis" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] InterPro:IPR003111
Pfam:PF02190 GO:GO:0006508 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0004176 GeneTree:ENSGT00440000033329 EMBL:CU856636
Ensembl:ENSSSCT00000030399 OMA:SIMIASE Uniprot:I3LGG6
Length = 191
Score = 214 (80.4 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 54/151 (35%), Positives = 84/151 (55%)
Query: 273 IPCQRFPLHIFEPRYRLMVRRIME-GNHRMGMVIIDPTTGSVADFACEVEITECEPLPDG 331
+PC PLH+FEPRYRLM+RR ME G R GM + G ++++ C +EI LPDG
Sbjct: 6 VPC---PLHVFEPRYRLMIRRCMETGTKRFGMCLSAEHAG-LSEYGCMLEIKGVRTLPDG 61
Query: 332 RFVLEIESRRRFRILRSWDQDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYARLWL 391
V++ RFR+L +DGY A+IE+++D EG +L L ++ + W
Sbjct: 62 SSVVDAIGISRFRVLSHRHRDGYNTADIEYLEDEKVEG-PGHEELSTLHDSVYHQSVSWF 120
Query: 392 RREKESARQDRRRLEKLLNVEVMMPPSQDPE 422
++ QD + E++L+ +MP ++PE
Sbjct: 121 -----TSLQDHMK-EQILSHFGLMP-DREPE 144
>POMBASE|SPBC14F5.10c [details] [associations]
symbol:SPBC14F5.10c "ubiquitin-protein ligase E3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISM] [GO:0005575
"cellular_component" evidence=ND] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=ISM] [GO:0033554
"cellular response to stress" evidence=IEP] InterPro:IPR001841
InterPro:IPR003111 Pfam:PF02190 PROSITE:PS50089 SMART:SM00184
SMART:SM00464 PomBase:SPBC14F5.10c Prosite:PS00518 GO:GO:0033554
GO:GO:0046872 EMBL:CU329671 GO:GO:0008270 GO:GO:0006508
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
eggNOG:COG2802 HSSP:Q9CQJ4 PIR:T39456 RefSeq:NP_596736.1
ProteinModelPortal:O60106 EnsemblFungi:SPBC14F5.10c.1
GeneID:2539750 KEGG:spo:SPBC14F5.10c KO:K07157 OrthoDB:EOG437VPJ
NextBio:20800901 Uniprot:O60106
Length = 486
Score = 202 (76.2 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 41/128 (32%), Positives = 73/128 (57%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLFITPRTC--AVSVTL 234
+ +C +C +LY+P+ +PCGH+FC CL Q++ + +CP CR L +P A S ++
Sbjct: 166 ELECQICFGMLYDPVVSPCGHTFCGPCLMQALTQSPQCPTCRFGL-PSPVVLEHAKSHSI 224
Query: 235 NSIIQKNFPEEYAERKSEHDSLINFGVDLMPLFVMDVVIPCQRFP--LHIFEPRYRLMVR 292
+ ++ +P+ + ER+ + +PLF+ + P R P LHIFE RY +M++
Sbjct: 225 TTFLRDFYPDNWLERQKSWEEEKE-QESWLPLFISMLAYP--RMPTFLHIFELRYHIMIK 281
Query: 293 RIMEGNHR 300
+ +E + R
Sbjct: 282 KCLETSKR 289
Score = 51 (23.0 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 314 ADFACEVEITECEPLPDGRFVLEIESRRRFRILRSWDQDG 353
+++ +EI + EPL DGR ++E RI+ + DG
Sbjct: 320 SEYGTILEIIQVEPLIDGRSLVEARGSYCVRII-DFRADG 358
>TAIR|locus:2018427 [details] [associations]
symbol:AT1G75460 species:3702 "Arabidopsis thaliana"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA;ISS]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0000165 "MAPK cascade" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010207 "photosystem
II assembly" evidence=RCA] [GO:0010310 "regulation of hydrogen
peroxide metabolic process" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR003111 Pfam:PF02190 EMBL:CP002684 GO:GO:0009507
GO:GO:0006508 InterPro:IPR015947 SUPFAM:SSF88697 EMBL:AC023754
GO:GO:0004176 EMBL:AY045939 EMBL:AY088757 EMBL:AY142509
IPI:IPI00545545 PIR:C96785 RefSeq:NP_177679.1 UniGene:At.16258
UniGene:At.67159 ProteinModelPortal:Q9FWT4 SMR:Q9FWT4 STRING:Q9FWT4
PRIDE:Q9FWT4 EnsemblPlants:AT1G75460.1 GeneID:843882
KEGG:ath:AT1G75460 TAIR:At1g75460 InParanoid:Q9FWT4 OMA:RDCLREK
PhylomeDB:Q9FWT4 ProtClustDB:CLSN2682519 ArrayExpress:Q9FWT4
Genevestigator:Q9FWT4 Uniprot:Q9FWT4
Length = 278
Score = 196 (74.1 bits), Expect = 7.6e-14, P = 7.6e-14
Identities = 65/214 (30%), Positives = 102/214 (47%)
Query: 226 RTCAVSVTLNSIIQKNFPEEYAERKS-EHDSLINFGVDLMPLFVMDVVI-PCQRFPLHIF 283
R C ++ + +F E++ KS + D ++ +PLF + +V+ P PL IF
Sbjct: 39 RRCKLNSSFRCS-SSSFSEKHHNAKSPKSDDIVE-----LPLFPLPLVLFPGAILPLQIF 92
Query: 284 EPRYRLMVRRIMEGNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRF 343
E RYR+M+ +++ + R G+V D +GS A+ C E+ + E L D RF L + + RF
Sbjct: 93 EFRYRIMMHTLLQSDLRFGVVYSDSVSGSAAEVGCVGEVVKHERLVDDRFFLVCKGQERF 152
Query: 344 RILRSWDQDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAAEYARLWLRREKESARQDRR 403
R+ Y V E+ W++D P G E+ L L N E L KE R R
Sbjct: 153 RVTNVVRTKPYLVGEVTWLED-RPSGEEN---LDSLAN---EVEVLM----KEVIRLSNR 201
Query: 404 RLEKLLNVEVM-MPPSQDPERFSFWLATLSDRRP 436
L EV + +Q P FSF++ + + P
Sbjct: 202 -LNGKAEKEVQDLRRNQFPTPFSFFVGSTFEGAP 234
>TAIR|locus:2013144 [details] [associations]
symbol:AT1G19740 species:3702 "Arabidopsis thaliana"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA;ISS]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0010207 "photosystem II assembly" evidence=RCA]
InterPro:IPR003111 Pfam:PF02190 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009570 GO:GO:0006508
InterPro:IPR015947 SUPFAM:SSF88697 EMBL:AC007797 GO:GO:0004176
eggNOG:COG2802 ProtClustDB:CLSN2682519 EMBL:AY128391 EMBL:BT000129
IPI:IPI00526462 PIR:E86330 RefSeq:NP_173404.1 UniGene:At.16207
ProteinModelPortal:Q9FXH3 SMR:Q9FXH3 IntAct:Q9FXH3 STRING:Q9FXH3
PaxDb:Q9FXH3 PRIDE:Q9FXH3 EnsemblPlants:AT1G19740.1 GeneID:838563
KEGG:ath:AT1G19740 TAIR:At1g19740 HOGENOM:HOG000264785
InParanoid:Q9FXH3 OMA:LDHTRKQ PhylomeDB:Q9FXH3 ArrayExpress:Q9FXH3
Genevestigator:Q9FXH3 Uniprot:Q9FXH3
Length = 278
Score = 187 (70.9 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 57/174 (32%), Positives = 86/174 (49%)
Query: 264 MPLFVMDVVI-PCQRFPLHIFEPRYRLMVRRIMEGNHRMGMVIIDPTTGSVADFACEVEI 322
+PLF + +V+ P PL IFE RYR+M++ +++ + R G+V D +GS A C EI
Sbjct: 72 LPLFPLPLVLFPGATIPLQIFEFRYRVMMQTLLQSDLRFGVVYSDAVSGSAAGIGCVGEI 131
Query: 323 TECEPLPDGRFVLEIESRRRFRILRSWDQDGYRVAEIEWVQDIHPEGVEDRADLQDLTNN 382
+ E L D RF L + + RFR+ Y VA++ W++D P G E+ L +L N
Sbjct: 132 VKHERLVDDRFFLICKGQERFRVTDLVRTKPYLVAKVTWLED-RPSGEEN---LDELAN- 186
Query: 383 AAEYARLWLRREKESARQDRRRLEKLLNVEVMMPPSQDPERFSFWLATLSDRRP 436
E L KE R R K + +Q P FSF++ + + P
Sbjct: 187 --EVEVLM----KEVIRLSNRLNGKPDKESQDLRKNQFPTPFSFFVGSTFEGAP 234
>UNIPROTKB|F1STF3 [details] [associations]
symbol:LONRF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50089 PROSITE:PS50293 SMART:SM00028
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00440000033329 EMBL:CU856636
Ensembl:ENSSSCT00000008954 Uniprot:F1STF3
Length = 545
Score = 186 (70.5 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVL--FITPRTCAVSVTL 234
DF+C LC++LL+EP+TTPCGH+FC CL + +D CPLC+ L + R ++
Sbjct: 456 DFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKEKLSELLASRNFNITTLA 515
Query: 235 NSIIQKNFPEEYAERKSEHD 254
+I + +E ++RK +D
Sbjct: 516 EELILRYLSDELSDRKRIYD 535
Score = 44 (20.5 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 26 VQKGNRAFRESNFEEAISNYSRA 48
V+KG+ AFR +E A + A
Sbjct: 28 VEKGDEAFRAGEYETAAELFRSA 50
Score = 39 (18.8 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 114 KSHLLKANALILLERYDMARDAILSGLQVDPFSNPLQASLQNL 156
K H +KA AL L R A L L ++P S+ ++ Q +
Sbjct: 268 KGHHVKALALSGLGRSKEVLRAFLYCLALNPESHSVKKEAQKV 310
>UNIPROTKB|I3LHE2 [details] [associations]
symbol:LONRF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50089 PROSITE:PS50293 SMART:SM00028
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00440000033329 OMA:ELANTRW
EMBL:CU856636 Ensembl:ENSSSCT00000023061 Uniprot:I3LHE2
Length = 563
Score = 186 (70.5 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVL--FITPRTCAVSVTL 234
DF+C LC++LL+EP+TTPCGH+FC CL + +D CPLC+ L + R ++
Sbjct: 471 DFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKEKLSELLASRNFNITTLA 530
Query: 235 NSIIQKNFPEEYAERKSEHD 254
+I + +E ++RK +D
Sbjct: 531 EELILRYLSDELSDRKRIYD 550
Score = 44 (20.5 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 26 VQKGNRAFRESNFEEAISNYSRA 48
V+KG+ AFR +E A + A
Sbjct: 34 VEKGDEAFRAGEYETAAELFRSA 56
Score = 39 (18.8 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 114 KSHLLKANALILLERYDMARDAILSGLQVDPFSNPLQASLQNL 156
K H +KA AL L R A L L ++P S+ ++ Q +
Sbjct: 274 KGHHVKALALSGLGRSKEVLRAFLYCLALNPESHSVKKEAQKV 316
>UNIPROTKB|F1MT19 [details] [associations]
symbol:F1MT19 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] InterPro:IPR003111
InterPro:IPR011990 Pfam:PF02190 GO:GO:0006508 Gene3D:1.25.40.10
InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0004176
GeneTree:ENSGT00440000033329 EMBL:DAAA02030190 EMBL:DAAA02030188
EMBL:DAAA02030189 IPI:IPI00714912 Ensembl:ENSBTAT00000005666
OMA:ELANTRW Uniprot:F1MT19
Length = 757
Score = 156 (60.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 41/138 (29%), Positives = 71/138 (51%)
Query: 237 IIQKNFPEEYAERKSEHD--SLINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLMVRRI 294
+I + F +E ++R + + L + D+ P+FV + P PLH+FEP Y LM+RR
Sbjct: 520 LIFRYFSDELSDRIHDEEMVELSHLTRDV-PIFVCAMAFPTVPCPLHVFEPCYWLMIRRC 578
Query: 295 ME-GNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSWDQDG 353
+E G R GM + + ++ C + + + G +++ RF +L +DG
Sbjct: 579 LEMGTRRSGMCL-SAEHEWIPEYDCTLAVKDIRTFSYGGSIIDAIGISRFWVLSHHHRDG 637
Query: 354 YRVAEIEWVQDIHPEGVE 371
Y A+IE+++D EG E
Sbjct: 638 YN-ADIEYLEDERVEGPE 654
Score = 73 (30.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 29/87 (33%), Positives = 36/87 (41%)
Query: 120 ANALILLERYDMARDAILSG-LQVDPFSNPLQASLQNL--ERTTASLIGRRIHGTPERTD 176
A A LLE R A L G L++D L SL R GR P D
Sbjct: 66 ARAGRLLECLGALRGAALLGALRLDELGE-LTVSLARALGPRERRESPGRAPGEAPR--D 122
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSC 203
C C +LL++P+T P G + C C
Sbjct: 123 LLGCPCCRRLLHKPVTLPFGLTVCGRC 149
>WB|WBGene00011365 [details] [associations]
symbol:T02C1.1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:Z19156 eggNOG:COG5432
PIR:S28290 RefSeq:NP_499044.1 ProteinModelPortal:Q03605 SMR:Q03605
STRING:Q03605 EnsemblMetazoa:T02C1.1 GeneID:176305
KEGG:cel:CELE_T02C1.1 UCSC:T02C1.1 CTD:176305 WormBase:T02C1.1
HOGENOM:HOG000019179 InParanoid:Q03605 OMA:DEDFCCA NextBio:892010
Uniprot:Q03605
Length = 160
Score = 156 (60.0 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 33/86 (38%), Positives = 46/86 (53%)
Query: 174 RTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLFITPRTCAV-SV 232
R +DF C +CL EP CGHS+CR C+ ++ KCPLCRA R + S+
Sbjct: 2 RDEDFCCAVCLDFFVEPCIIECGHSYCRFCIESHLNINEKCPLCRAHTGNPIRNRQLESL 61
Query: 233 TLNSIIQKNFPEEYAER-KSEHDSLI 257
T++ + +N EY ER KS L+
Sbjct: 62 TMSYVSSRNISTEYYERMKSYQKKLL 87
>UNIPROTKB|G3X8D4 [details] [associations]
symbol:RNF168 "E3 ubiquitin-protein ligase RNF168"
species:9913 "Bos taurus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00620000087973 EMBL:DAAA02001689
Ensembl:ENSBTAT00000056454 Uniprot:G3X8D4
Length = 190
Score = 138 (53.6 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 180 CTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKC-PLCRAVLFITPR-----TCAVSVT 233
C +C+++L+EP+T PC H+ C+ C ++++ + C P CR + R V++
Sbjct: 16 CQICVEILFEPVTLPCNHTLCKPCFESTVEKASLCCPFCRRRVSSWARYRSRTNSLVNME 75
Query: 234 LNSIIQKNFPEEYAERKSEHDS 255
L IIQK++P+E R S +S
Sbjct: 76 LWEIIQKHYPKECKLRASGQES 97
Score = 42 (19.8 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 360 EWVQDIHPEGVEDRADLQDLTNNAAEYA-RLWLRREKESARQDRRR 404
E+ ++I E RA ++ + EY +L E+E RQ +R
Sbjct: 119 EYEEEISKVEAERRACEEEENKASEEYIQKLLAEEEEEEKRQAEKR 164
>TAIR|locus:2086666 [details] [associations]
symbol:AT3G27330 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002686 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR008166 Pfam:PF01697 IPI:IPI00542360 RefSeq:NP_189369.1
UniGene:At.5839 ProteinModelPortal:F4IWG7 SMR:F4IWG7 PRIDE:F4IWG7
EnsemblPlants:AT3G27330.1 GeneID:822354 KEGG:ath:AT3G27330
OMA:CRQLIGN ArrayExpress:F4IWG7 Uniprot:F4IWG7
Length = 913
Score = 178 (67.7 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 33/82 (40%), Positives = 50/82 (60%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDR-GNKCPLCRAVLFITPRTCAVSVTL 234
D+ C +CL++ +EP TT CGHSFC+ CL + D+ G KCP CR ++ R C V+ L
Sbjct: 720 DELSCAICLEICFEPSTTTCGHSFCKKCLRSAADKCGRKCPKCRQLIG-NGRYCTVNTVL 778
Query: 235 NSIIQKNFPEEYAERKSEHDSL 256
+ IQ FP+E +++ +L
Sbjct: 779 WNTIQLLFPKEVEAQRAASANL 800
>ZFIN|ZDB-GENE-081031-50 [details] [associations]
symbol:btr19 "bloodthirsty-related gene family,
member 19" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-081031-50
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00670000097622
EMBL:CT030005 Ensembl:ENSDART00000146448 Uniprot:I3IRW2
Length = 192
Score = 148 (57.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 27/80 (33%), Positives = 47/80 (58%)
Query: 175 TDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGN--KCPLCRAVLFITPRTCAVSV 232
++D C++CL++ +P++TPCGH+FC+SCL ++ CP C+ P ++
Sbjct: 11 SEDLQCSICLEVFTDPVSTPCGHNFCKSCLNTCWNKTQTCSCPNCKETFTQRP-DLKINT 69
Query: 233 TLNSIIQKNFPEEYAERKSE 252
TL I +++ EE E K+E
Sbjct: 70 TLREI-SEHYKEERPEEKAE 88
>UNIPROTKB|F8WD60 [details] [associations]
symbol:RNF168 "E3 ubiquitin-protein ligase RNF168"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC092933 EMBL:AC117490 HGNC:HGNC:26661 IPI:IPI00925077
ProteinModelPortal:F8WD60 SMR:F8WD60 Ensembl:ENST00000437070
ArrayExpress:F8WD60 Bgee:F8WD60 Uniprot:F8WD60
Length = 116
Score = 147 (56.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 29/82 (35%), Positives = 48/82 (58%)
Query: 180 CTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKC-PLCRAVL-----FITPRTCAVSVT 233
C +C+++L EP+T PC H+ C+ C ++++ + C P CR + + T R V+V
Sbjct: 16 CGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSSWTRYHTRRNSLVNVE 75
Query: 234 LNSIIQKNFPEEYAERKSEHDS 255
L +IIQK++P E R S +S
Sbjct: 76 LWTIIQKHYPRECKLRASGQES 97
>RGD|1306757 [details] [associations]
symbol:Rnf125 "ring finger protein 125" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR015880 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
SMART:SM00355 RGD:1306757 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 EMBL:CH473974
GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946 CTD:54941
eggNOG:NOG46770 HOVERGEN:HBG098958 KO:K12170 OMA:RTRCGHV
OrthoDB:EOG4SJ5FM EMBL:BC162061 IPI:IPI00870006
RefSeq:NP_001101894.1 UniGene:Rn.163367 STRING:B1WCA3
Ensembl:ENSRNOT00000021136 GeneID:361296 KEGG:rno:361296
NextBio:675857 Genevestigator:B1WCA3 Uniprot:B1WCA3
Length = 233
Score = 155 (59.6 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 170 GTPERT-DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNK--CPLCRAVL 221
G PE FDC++CL++L++P+ T CGH FCRSC+ S+ NK CP CRA L
Sbjct: 26 GDPELPITSFDCSVCLEVLHQPVRTRCGHVFCRSCIATSIKNNNKWTCPYCRAYL 80
>GENEDB_PFALCIPARUM|PF11_0244 [details] [associations]
symbol:PF11_0244 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AE014186 RefSeq:XP_001347915.1
ProteinModelPortal:Q8IID0 IntAct:Q8IID0 MINT:MINT-1640413
PRIDE:Q8IID0 EnsemblProtists:PF11_0244:mRNA GeneID:810791
KEGG:pfa:PF11_0244 EuPathDB:PlasmoDB:PF3D7_1123300
ProtClustDB:CLSZ2432487 Uniprot:Q8IID0
Length = 689
Score = 167 (63.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLFITPRTCAVSVTLNS 236
+ +C +C+KLL P+T PCGH+FCR C+ ++ + N CPLCR+ + +++ L
Sbjct: 222 EVECAICMKLLIVPVTIPCGHNFCRDCIEKAKEYKNLCPLCRSNMGDKKN---INLLLGE 278
Query: 237 IIQKNFPEEYAERKSEHDSL 256
+I++ +P Y++R E ++L
Sbjct: 279 LIKQKYPLTYSKRLEEIENL 298
>UNIPROTKB|Q8IID0 [details] [associations]
symbol:PF11_0244 "Conserved Plasmodium protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AE014186 RefSeq:XP_001347915.1
ProteinModelPortal:Q8IID0 IntAct:Q8IID0 MINT:MINT-1640413
PRIDE:Q8IID0 EnsemblProtists:PF11_0244:mRNA GeneID:810791
KEGG:pfa:PF11_0244 EuPathDB:PlasmoDB:PF3D7_1123300
ProtClustDB:CLSZ2432487 Uniprot:Q8IID0
Length = 689
Score = 167 (63.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLFITPRTCAVSVTLNS 236
+ +C +C+KLL P+T PCGH+FCR C+ ++ + N CPLCR+ + +++ L
Sbjct: 222 EVECAICMKLLIVPVTIPCGHNFCRDCIEKAKEYKNLCPLCRSNMGDKKN---INLLLGE 278
Query: 237 IIQKNFPEEYAERKSEHDSL 256
+I++ +P Y++R E ++L
Sbjct: 279 LIKQKYPLTYSKRLEEIENL 298
>ZFIN|ZDB-GENE-070912-318 [details] [associations]
symbol:ftr27 "finTRIM family, member 27"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-070912-318 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:KOG2177 OrthoDB:EOG4R23TJ
GeneTree:ENSGT00670000097622 HOVERGEN:HBG106862 EMBL:BX548047
IPI:IPI00862890 UniGene:Dr.88749 Ensembl:ENSDART00000135584
OMA:YESHEES Uniprot:B0S6S1
Length = 171
Score = 141 (54.7 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 27/70 (38%), Positives = 41/70 (58%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRG----NKCPLCRAVLFITPRTCA-V 230
D F C++CL LL +P+T PCGHS+C +C+ + +R N CP CR TP+
Sbjct: 11 DQFSCSICLDLLKDPVTIPCGHSYCMNCITEYWNRRDLSINSCPQCRQTF--TPKPALNK 68
Query: 231 SVTLNSIIQK 240
+V L +++K
Sbjct: 69 NVMLAEMVEK 78
>UNIPROTKB|H0Y340 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 HGNC:HGNC:17440 ChiTaRS:RFWD2
Ensembl:ENST00000367667 Uniprot:H0Y340
Length = 113
Score = 140 (54.3 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 161 ASLIGRRIHGTPERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAV 220
A L I+ ++++DF C +C ++ E T CGHSFC C+ QS++ N+CP C V
Sbjct: 22 APLCNGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYV 81
Query: 221 L 221
+
Sbjct: 82 V 82
>UNIPROTKB|G3N0X7 [details] [associations]
symbol:G3N0X7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] InterPro:IPR003111
Pfam:PF02190 GO:GO:0006508 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0004176 GeneTree:ENSGT00440000033329 EMBL:DAAA02030190
EMBL:DAAA02030188 EMBL:DAAA02030189 Ensembl:ENSBTAT00000064862
Uniprot:G3N0X7
Length = 500
Score = 161 (61.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 41/138 (29%), Positives = 71/138 (51%)
Query: 237 IIQKNFPEEYAERKSEHD--SLINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLMVRRI 294
+I + F +E ++R + + L + D+ P+FV + P PLH+FEP Y LM+RR
Sbjct: 263 LIFRYFSDELSDRIHDEEMVELSHLTRDV-PIFVCAMAFPTVPCPLHVFEPCYWLMIRRC 321
Query: 295 ME-GNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSWDQDG 353
+E G R GM + + ++ C + + + G +++ RF +L +DG
Sbjct: 322 LEMGTRRSGMCL-SAEHAEIPEYDCTLAVKDIRTFSYGGSIIDAIGISRFWVLSHHHRDG 380
Query: 354 YRVAEIEWVQDIHPEGVE 371
Y A+IE+++D EG E
Sbjct: 381 YN-ADIEYLEDERVEGPE 397
>UNIPROTKB|G3N3N3 [details] [associations]
symbol:G3N3N3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] InterPro:IPR003111
InterPro:IPR011990 Pfam:PF02190 GO:GO:0006508 Gene3D:1.25.40.10
InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0004176
GeneTree:ENSGT00440000033329 EMBL:DAAA02030190 EMBL:DAAA02030188
EMBL:DAAA02030189 Ensembl:ENSBTAT00000064785 Uniprot:G3N3N3
Length = 508
Score = 161 (61.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 41/138 (29%), Positives = 71/138 (51%)
Query: 237 IIQKNFPEEYAERKSEHD--SLINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLMVRRI 294
+I + F +E ++R + + L + D+ P+FV + P PLH+FEP Y LM+RR
Sbjct: 271 LIFRYFSDELSDRIHDEEMVELSHLTRDV-PIFVCAMAFPTVPCPLHVFEPCYWLMIRRC 329
Query: 295 ME-GNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSWDQDG 353
+E G R GM + + ++ C + + + G +++ RF +L +DG
Sbjct: 330 LEMGTRRSGMCL-SAEHAEIPEYDCTLAVKDIRTFSYGGSIIDAIGISRFWVLSHHHRDG 388
Query: 354 YRVAEIEWVQDIHPEGVE 371
Y A+IE+++D EG E
Sbjct: 389 YN-ADIEYLEDERVEGPE 405
>MGI|MGI:1914914 [details] [associations]
symbol:Rnf125 "ring finger protein 125" species:10090 "Mus
musculus" [GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR015880
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 SMART:SM00355
UniPathway:UPA00143 MGI:MGI:1914914 Prosite:PS00518 GO:GO:0005829
GO:GO:0046872 GO:GO:0008270 Reactome:REACT_107772 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907
GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946 CTD:54941
eggNOG:NOG46770 HOVERGEN:HBG098958 KO:K12170 OrthoDB:EOG4SJ5FM
EMBL:AK006569 EMBL:AK050395 EMBL:AC138611 EMBL:BC094290
EMBL:BC116883 EMBL:BC116887 IPI:IPI00137236 IPI:IPI00269061
RefSeq:NP_080577.1 UniGene:Mm.45980 ProteinModelPortal:Q9D9R0
SMR:Q9D9R0 STRING:Q9D9R0 PhosphoSite:Q9D9R0 PRIDE:Q9D9R0
Ensembl:ENSMUST00000050004 GeneID:67664 KEGG:mmu:67664
UCSC:uc008eez.1 UCSC:uc008efa.1 InParanoid:Q0VG32 OMA:VPNENAN
ChiTaRS:RNF125 NextBio:325181 Bgee:Q9D9R0 CleanEx:MM_RNF125
Genevestigator:Q9D9R0 GermOnline:ENSMUSG00000033107 Uniprot:Q9D9R0
Length = 233
Score = 151 (58.2 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 178 FDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNK--CPLCRAVL 221
FDC++CL++L++P+ T CGH FCRSC+ S+ NK CP CRA L
Sbjct: 35 FDCSVCLEVLHQPVRTRCGHVFCRSCIATSIKNNNKWTCPYCRAYL 80
>UNIPROTKB|E1BJY5 [details] [associations]
symbol:RNF125 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184 SMART:SM00355
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GeneTree:ENSGT00530000063064 CTD:54941 KO:K12170
OMA:RTRCGHV EMBL:DAAA02056451 IPI:IPI00717546 RefSeq:NP_001192788.1
UniGene:Bt.51849 ProteinModelPortal:E1BJY5
Ensembl:ENSBTAT00000004048 GeneID:519541 KEGG:bta:519541
NextBio:20872894 Uniprot:E1BJY5
Length = 232
Score = 150 (57.9 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 31/65 (47%), Positives = 41/65 (63%)
Query: 160 TASLIGRRIHGTPER-TDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNK--CPL 216
T + RR G PE FDC++CL++L+ P+ T CGH FCRSC+ S+ + NK CP
Sbjct: 18 TPRALERR--GDPELPVTSFDCSVCLEVLHHPVRTRCGHVFCRSCIATSL-KNNKWTCPY 74
Query: 217 CRAVL 221
CRA L
Sbjct: 75 CRAYL 79
>UNIPROTKB|K7GL56 [details] [associations]
symbol:LOC100517591 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00530000063064 EMBL:CU019565
Ensembl:ENSSSCT00000035939 Uniprot:K7GL56
Length = 206
Score = 145 (56.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 32/75 (42%), Positives = 43/75 (57%)
Query: 152 SLQNLERTTASLIGRRIH--GTPER-TDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSM 208
S N + AS R + G P FDC++CL++L+ P+ T CGH FCRSC+ S+
Sbjct: 6 SSDNGKSAPASATPRALERRGDPALPVTSFDCSVCLEVLHHPVRTRCGHVFCRSCIATSL 65
Query: 209 DRGNK--CPLCRAVL 221
+ NK CP CRA L
Sbjct: 66 -KNNKWTCPYCRAYL 79
>UNIPROTKB|J9PBI0 [details] [associations]
symbol:RNF125 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184 SMART:SM00355
Prosite:PS00518 Pfam:PF05605 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR008598 GeneTree:ENSGT00530000063064
CTD:54941 KO:K12170 OMA:RTRCGHV EMBL:AAEX03005423
RefSeq:XP_547620.3 Ensembl:ENSCAFT00000044835 GeneID:490498
KEGG:cfa:490498 Uniprot:J9PBI0
Length = 232
Score = 148 (57.2 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 170 GTPER-TDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNK--CPLCRAVL 221
G PE FDC++CL++L++P+ T CGH FCRSC+ S+ + N+ CP CRA L
Sbjct: 26 GDPELPVTSFDCSVCLEVLHQPVRTRCGHVFCRSCIATSL-KNNRWTCPYCRAYL 79
>UNIPROTKB|Q96EQ8 [details] [associations]
symbol:RNF125 "E3 ubiquitin-protein ligase RNF125"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0032480 "negative regulation of type I interferon production"
evidence=TAS] [GO:0045087 "innate immune response" evidence=TAS]
InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184
SMART:SM00355 UniPathway:UPA00143 Prosite:PS00518
Reactome:REACT_6900 GO:GO:0046872 GO:GO:0008270 GO:GO:0045087
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0032480 HOGENOM:HOG000230946 EMBL:AK000463
EMBL:BC012021 IPI:IPI00410652 RefSeq:NP_060301.2 UniGene:Hs.633703
ProteinModelPortal:Q96EQ8 SMR:Q96EQ8 IntAct:Q96EQ8 STRING:Q96EQ8
PhosphoSite:Q96EQ8 DMDM:143811449 PRIDE:Q96EQ8
Ensembl:ENST00000217740 GeneID:54941 KEGG:hsa:54941 UCSC:uc002kxf.1
CTD:54941 GeneCards:GC18P029598 H-InvDB:HIX0014384 HGNC:HGNC:21150
HPA:HPA041514 MIM:610432 neXtProt:NX_Q96EQ8 PharmGKB:PA134950383
eggNOG:NOG46770 HOVERGEN:HBG098958 InParanoid:Q96EQ8 KO:K12170
OMA:RTRCGHV OrthoDB:EOG4SJ5FM PhylomeDB:Q96EQ8 GenomeRNAi:54941
NextBio:58082 Bgee:Q96EQ8 CleanEx:HS_RNF125 Genevestigator:Q96EQ8
GermOnline:ENSG00000101695 Uniprot:Q96EQ8
Length = 232
Score = 148 (57.2 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 31/65 (47%), Positives = 41/65 (63%)
Query: 160 TASLIGRRIHGTPER-TDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNK--CPL 216
TA + RR PE FDC +CL++L++P+ T CGH FCRSC+ S+ + NK CP
Sbjct: 18 TARALERR--RDPELPVTSFDCAVCLEVLHQPVRTRCGHVFCRSCIATSL-KNNKWTCPY 74
Query: 217 CRAVL 221
CRA L
Sbjct: 75 CRAYL 79
>UNIPROTKB|F1SAL7 [details] [associations]
symbol:LOC100517591 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GeneTree:ENSGT00530000063064
KO:K12170 OMA:RTRCGHV EMBL:CU019565 RefSeq:XP_003127936.2
Ensembl:ENSSSCT00000004129 GeneID:100517591 KEGG:ssc:100517591
Uniprot:F1SAL7
Length = 232
Score = 145 (56.1 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 32/75 (42%), Positives = 43/75 (57%)
Query: 152 SLQNLERTTASLIGRRIH--GTPER-TDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSM 208
S N + AS R + G P FDC++CL++L+ P+ T CGH FCRSC+ S+
Sbjct: 6 SSDNGKSAPASATPRALERRGDPALPVTSFDCSVCLEVLHHPVRTRCGHVFCRSCIATSL 65
Query: 209 DRGNK--CPLCRAVL 221
+ NK CP CRA L
Sbjct: 66 -KNNKWTCPYCRAYL 79
>UNIPROTKB|J3KSI2 [details] [associations]
symbol:RNF138 "E3 ubiquitin-protein ligase RNF138"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HGNC:HGNC:17765 EMBL:AC011825 Ensembl:ENST00000578107
Uniprot:J3KSI2
Length = 108
Score = 130 (50.8 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 176 DDFDCTLCLKLLYEPI-TTPCGHSFCRSCLFQSM-DRGNKCPLCRAVLFITPRTCAV-SV 232
DDF C +C ++L P+ TT C H FCR C +M + G CPLCR + R C ++
Sbjct: 14 DDFYCPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGAHCPLCRGNVTRRERACPERAL 73
Query: 233 TLNSIIQK 240
L +I++K
Sbjct: 74 DLENIMRK 81
>UNIPROTKB|J3QKM8 [details] [associations]
symbol:RNF138 "E3 ubiquitin-protein ligase RNF138"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HGNC:HGNC:17765 EMBL:AC011825 Ensembl:ENST00000580499
Uniprot:J3QKM8
Length = 142
Score = 130 (50.8 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 176 DDFDCTLCLKLLYEPI-TTPCGHSFCRSCLFQSM-DRGNKCPLCRAVLFITPRTCAV-SV 232
DDF C +C ++L P+ TT C H FCR C +M + G CPLCR + R C ++
Sbjct: 14 DDFYCPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGAHCPLCRGNVTRRERACPERAL 73
Query: 233 TLNSIIQK 240
L +I++K
Sbjct: 74 DLENIMRK 81
>UNIPROTKB|Q8IYW5 [details] [associations]
symbol:RNF168 "E3 ubiquitin-protein ligase RNF168"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0010212 "response to
ionizing radiation" evidence=IDA] [GO:0045739 "positive regulation
of DNA repair" evidence=IDA] [GO:0006302 "double-strand break
repair" evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
[GO:0070535 "histone H2A K63-linked ubiquitination"
evidence=IMP;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0043130
"ubiquitin binding" evidence=IDA] [GO:0045190 "isotype switching"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IDA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IDA] [GO:0031491 "nucleosome binding" evidence=IDA]
[GO:0035861 "site of double-strand break" evidence=IDA] [GO:0070530
"K63-linked polyubiquitin binding" evidence=IDA] [GO:0045900
"negative regulation of translational elongation" evidence=IMP]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0036351 "histone H2A-K13 ubiquitination"
evidence=IDA] [GO:0036352 "histone H2A-K15 ubiquitination"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IDA]
[GO:0070534 "protein K63-linked ubiquitination" evidence=IDA]
[GO:0036297 "interstrand cross-link repair" evidence=TAS]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006302 GO:GO:0006511 GO:GO:0045190 GO:GO:0004842
GO:GO:0042393 GO:GO:0045739 GO:GO:0000151 GO:GO:0031491
GO:GO:0035518 GO:GO:0036297 GO:GO:0045900 GO:GO:0035861
GO:GO:0070530 EMBL:AC092933 CTD:165918 HOGENOM:HOG000154156
HOVERGEN:HBG067220 OrthoDB:EOG4THVT2 GO:GO:0070535 GO:GO:0036351
GO:GO:0036352 eggNOG:NOG292819 EMBL:AK054732 EMBL:AK093113
EMBL:AC117490 EMBL:BC033791 IPI:IPI00217899 RefSeq:NP_689830.2
UniGene:Hs.250648 PDB:3L11 PDBsum:3L11 ProteinModelPortal:Q8IYW5
SMR:Q8IYW5 DIP:DIP-37451N IntAct:Q8IYW5 MINT:MINT-1180501
STRING:Q8IYW5 PhosphoSite:Q8IYW5 DMDM:74762499 PaxDb:Q8IYW5
PRIDE:Q8IYW5 Ensembl:ENST00000318037 GeneID:165918 KEGG:hsa:165918
UCSC:uc003fwq.3 GeneCards:GC03M196195 HGNC:HGNC:26661 MIM:611943
MIM:612688 neXtProt:NX_Q8IYW5 PharmGKB:PA134945219
InParanoid:Q8IYW5 OMA:KSIFQMF PhylomeDB:Q8IYW5
EvolutionaryTrace:Q8IYW5 GenomeRNAi:165918 NextBio:88572
ArrayExpress:Q8IYW5 Bgee:Q8IYW5 CleanEx:HS_RNF168
Genevestigator:Q8IYW5 GermOnline:ENSG00000163961 Uniprot:Q8IYW5
Length = 571
Score = 147 (56.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 29/82 (35%), Positives = 48/82 (58%)
Query: 180 CTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKC-PLCRAVL-----FITPRTCAVSVT 233
C +C+++L EP+T PC H+ C+ C ++++ + C P CR + + T R V+V
Sbjct: 16 CGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSSWTRYHTRRNSLVNVE 75
Query: 234 LNSIIQKNFPEEYAERKSEHDS 255
L +IIQK++P E R S +S
Sbjct: 76 LWTIIQKHYPRECKLRASGQES 97
Score = 50 (22.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 360 EWVQDIHPEGVEDRADLQDLTNNAAEYA-RLWLRREKESARQDRRR 404
E+ ++I E RA ++ + EY RL E+E RQ +R
Sbjct: 119 EYEEEISKVAAERRASEEEENKASEEYIQRLLAEEEEEEKRQAEKR 164
>RGD|1560267 [details] [associations]
symbol:RGD1560267 "similar to ring finger protein 168"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
RGD:1560267 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 IPI:IPI00362874 Ensembl:ENSRNOT00000064441
Uniprot:F1LYM1
Length = 197
Score = 138 (53.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 36/106 (33%), Positives = 52/106 (49%)
Query: 172 PERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNK-CPLCRAVL-----FITP 225
P +D C LC++ L EPIT PC H+ C+SC + + N CP CR+ + + T
Sbjct: 10 PLSLEDCQCLLCMEFLIEPITMPCNHTMCKSCFKALLRKTNLFCPFCRSWISSWARYHTH 69
Query: 226 RTCAVSVTLNSIIQKNFPEEYAERK--SEHDSLINFGVDLMPLFVM 269
++ L IQ +PEE R E SL+ F D P+ V+
Sbjct: 70 VNSLINKELWERIQTQYPEECRRRTPGEERSSLV-FS-DHSPIRVL 113
>TAIR|locus:2037294 [details] [associations]
symbol:AT1G74990 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC008263 EMBL:AC013258
InterPro:IPR017907 HOGENOM:HOG000238304 EMBL:AY088830 EMBL:BT030642
IPI:IPI00531818 PIR:G96779 RefSeq:NP_177636.1 UniGene:At.34824
ProteinModelPortal:Q9S7D6 SMR:Q9S7D6 EnsemblPlants:AT1G74990.1
GeneID:843837 KEGG:ath:AT1G74990 TAIR:At1g74990 eggNOG:NOG241331
InParanoid:Q9S7D6 OMA:GCNICLE PhylomeDB:Q9S7D6
ProtClustDB:CLSN2914219 Genevestigator:Q9S7D6 Uniprot:Q9S7D6
Length = 137
Score = 129 (50.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 173 ERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSM---DRGNKCPLCRAVL 221
+ +++F C +CL+L EPI T CGH FC CL++ + + N CP+C+A++
Sbjct: 12 DASNNFGCNICLELAREPIVTLCGHLFCWPCLYKWLHYHSKSNHCPVCKALV 63
>UNIPROTKB|D4A9N5 [details] [associations]
symbol:Trim25 "Protein Trim25" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 RGD:1594396
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00700000104271
IPI:IPI00421577 Ensembl:ENSRNOT00000055674 ArrayExpress:D4A9N5
Uniprot:D4A9N5
Length = 468
Score = 143 (55.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQS-MDRGN--KCPLCRAVLFITPRTCAVSV 232
++ C++CL+ EP+TTPCGH+FCRSCL ++ + +G +CP CR V + P+ +V
Sbjct: 9 EELSCSICLEPFKEPVTTPCGHNFCRSCLNETWVVQGPPYRCPQCRTVYQVRPQLHKNTV 68
Query: 233 TLNSIIQKNFPEEYA 247
L +++++ E A
Sbjct: 69 -LCAVVEQFLQAEQA 82
Score = 51 (23.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 20/73 (27%), Positives = 31/73 (42%)
Query: 278 FPLHIFEPRYRLMVRRIMEGNHRMGMVIIDPTTGSVADFACEVEITECEP--LPDGRFVL 335
F H +P R ++RR ++R+ + P G C VE C P L L
Sbjct: 139 FQDHPLQPPVRDLLRRKCSRHNRLREMFC-PEHGECICHICLVEHKTCSPTILSQASADL 197
Query: 336 EIESRRRFRILRS 348
E + R++ I+ S
Sbjct: 198 ENKLRQKLTIMYS 210
>CGD|CAL0002668 [details] [associations]
symbol:TRY3 species:5476 "Candida albicans" [GO:0044011
"single-species biofilm formation on inanimate substrate"
evidence=IMP] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0005829 "cytosol"
evidence=IEA] [GO:0010811 "positive regulation of cell-substrate
adhesion" evidence=IMP] [GO:1900189 "positive regulation of cell
adhesion involved in single-species biofilm formation"
evidence=IMP] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
CGD:CAL0002668 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006357 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010811
GO:GO:1900189 GO:GO:0044011 InterPro:IPR017907 EMBL:AACQ01000082
EMBL:AACQ01000081 InterPro:IPR004331 Pfam:PF03105 PROSITE:PS51382
eggNOG:COG5574 RefSeq:XP_715677.1 RefSeq:XP_715733.1
ProteinModelPortal:Q5A1M4 GeneID:3642652 GeneID:3642708
KEGG:cal:CaO19.1971 KEGG:cal:CaO19.9527 Uniprot:Q5A1M4
Length = 494
Score = 151 (58.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 40/148 (27%), Positives = 67/148 (45%)
Query: 113 MKSHLLKANALI-LLERYDMARDAILSGLQVDPFSNP-LQASLQNLERTTASLIGRRIHG 170
++ H + AL +L ++D + SN + S +L ++ +I I
Sbjct: 329 LQFHTINNEALRKILNKFDKQTSLGIQNTFPQLISNDHIFMSGSSLAQSICYIIQESIIK 388
Query: 171 TPERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQ-SMDRGNKCPLCR---AVLFITPR 226
+ DD+ C +C+ + Y+PI CGH FC CL + D CPLCR A+L+
Sbjct: 389 VIPQLDDYSCPICMNIAYKPIRLSCGHLFCVRCLVKMKQDDKTSCPLCRKENAILYADSS 448
Query: 227 TCAVSVTLNSIIQKNFPEEYAERKSEHD 254
+ + +++K FP E E+ E D
Sbjct: 449 N--LDLESMELMKKYFPREVKEKLRERD 474
>UNIPROTKB|Q5A1M4 [details] [associations]
symbol:CaO19.1971 "Potential zinc RING finger protein"
species:237561 "Candida albicans SC5314" [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0010811 "positive regulation of cell-substrate adhesion"
evidence=IMP] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] [GO:1900189 "positive regulation
of cell adhesion involved in single-species biofilm formation"
evidence=IMP] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
CGD:CAL0002668 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006357 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010811
GO:GO:1900189 GO:GO:0044011 InterPro:IPR017907 EMBL:AACQ01000082
EMBL:AACQ01000081 InterPro:IPR004331 Pfam:PF03105 PROSITE:PS51382
eggNOG:COG5574 RefSeq:XP_715677.1 RefSeq:XP_715733.1
ProteinModelPortal:Q5A1M4 GeneID:3642652 GeneID:3642708
KEGG:cal:CaO19.1971 KEGG:cal:CaO19.9527 Uniprot:Q5A1M4
Length = 494
Score = 151 (58.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 40/148 (27%), Positives = 67/148 (45%)
Query: 113 MKSHLLKANALI-LLERYDMARDAILSGLQVDPFSNP-LQASLQNLERTTASLIGRRIHG 170
++ H + AL +L ++D + SN + S +L ++ +I I
Sbjct: 329 LQFHTINNEALRKILNKFDKQTSLGIQNTFPQLISNDHIFMSGSSLAQSICYIIQESIIK 388
Query: 171 TPERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQ-SMDRGNKCPLCR---AVLFITPR 226
+ DD+ C +C+ + Y+PI CGH FC CL + D CPLCR A+L+
Sbjct: 389 VIPQLDDYSCPICMNIAYKPIRLSCGHLFCVRCLVKMKQDDKTSCPLCRKENAILYADSS 448
Query: 227 TCAVSVTLNSIIQKNFPEEYAERKSEHD 254
+ + +++K FP E E+ E D
Sbjct: 449 N--LDLESMELMKKYFPREVKEKLRERD 474
>ZFIN|ZDB-GENE-030131-6013 [details] [associations]
symbol:rnf168 "ring finger protein 168"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0035518
"histone H2A monoubiquitination" evidence=ISS] [GO:0035861 "site of
double-strand break" evidence=ISS] [GO:0045190 "isotype switching"
evidence=ISS] [GO:0045900 "negative regulation of translational
elongation" evidence=ISS] [GO:0043130 "ubiquitin binding"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA;ISS] [GO:0010212 "response to ionizing radiation"
evidence=ISS] [GO:0036351 "histone H2A-K13 ubiquitination"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045739 "positive regulation of DNA repair" evidence=ISS]
[GO:0070530 "K63-linked polyubiquitin binding" evidence=ISS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006302 "double-strand
break repair" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0036352 "histone
H2A-K15 ubiquitination" evidence=ISS] [GO:0070535 "histone H2A
K63-linked ubiquitination" evidence=ISS] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
ZFIN:ZDB-GENE-030131-6013 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006302 GO:GO:0006511 GO:GO:0045190 GO:GO:0004842
GO:GO:0042393 GO:GO:0045739 GO:GO:0000151 GO:GO:0035518 HSSP:P38398
GO:GO:0045900 GO:GO:0035861 GO:GO:0070530 CTD:165918
HOGENOM:HOG000154156 OrthoDB:EOG4THVT2 GO:GO:0070535 GO:GO:0036351
GO:GO:0036352 EMBL:BC053301 IPI:IPI00487711 RefSeq:NP_956149.1
UniGene:Dr.7739 ProteinModelPortal:Q7T308 STRING:Q7T308
GeneID:334081 KEGG:dre:334081 eggNOG:NOG292819 InParanoid:Q7T308
NextBio:20810256 ArrayExpress:Q7T308 Uniprot:Q7T308
Length = 474
Score = 138 (53.6 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 29/83 (34%), Positives = 47/83 (56%)
Query: 174 RTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKC-PLCRAVLFITPRTCAVSV 232
+ D C +CL++ EP+T PC H+FC+ C +++D+ N C PLCR + R + +
Sbjct: 20 KRSDCVCPVCLEIFLEPVTLPCMHTFCKPCFLETVDKSNMCCPLCRKRVSTWARLNSRNK 79
Query: 233 TLNSI-----IQKNFPEEYAERK 250
TL ++ IQ FP + ER+
Sbjct: 80 TLVNMELWRRIQDAFPSQ-CERR 101
Score = 55 (24.4 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 370 VEDRADLQDLTNNAAE-YARLWLRREKESARQDRRRLEK 407
VE++ L++ A+E Y + L E+E ++RRR E+
Sbjct: 137 VEEKRALEEAERRASEEYIQRLLAEEEERLEEERRRREE 175
>ZFIN|ZDB-GENE-060825-109 [details] [associations]
symbol:btr04 "bloodthirsty-related gene family,
member 4" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-060825-109 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00660000095328 EMBL:CT030144 IPI:IPI00486847
RefSeq:XP_003198956.1 UniGene:Dr.30113 Ensembl:ENSDART00000138523
GeneID:565512 KEGG:dre:565512 CTD:565512 NextBio:20885923
Bgee:F1Q9T2 Uniprot:F1Q9T2
Length = 440
Score = 149 (57.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 28/84 (33%), Positives = 48/84 (57%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKC--PLCRAVLFITPRTCAVSVT 233
++ C++CL + +P++TPCGH+FC+SCL + D+ C P+C P+ ++ T
Sbjct: 35 EELQCSVCLDVFTDPVSTPCGHNFCKSCLNECWDKSQNCNCPICSETFSKRPKL-KINTT 93
Query: 234 LNSIIQKNFPEEYAERKSEHDSLI 257
L ++Q F E + KSE +I
Sbjct: 94 LRQVVQL-FKERLS--KSEVQQMI 114
>UNIPROTKB|H3BRQ5 [details] [associations]
symbol:BFAR "Bifunctional apoptosis regulator" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HGNC:HGNC:17613 EMBL:AC009167
Ensembl:ENST00000570219 Bgee:H3BRQ5 Uniprot:H3BRQ5
Length = 109
Score = 127 (49.8 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCL--FQSMDRGNKCPLCRAVLFITPRTCAVSVTL 234
+F C C +L P T CGHSFCR CL + + + +CP CR P+ VS+ L
Sbjct: 31 EFSCHCCYDILVNPTTLNCGHSFCRHCLALWWASSKKTECPECREKWEGFPK---VSILL 87
Query: 235 NSIIQKNFPE 244
I+K FP+
Sbjct: 88 RDAIEKLFPD 97
>UNIPROTKB|G3X8F3 [details] [associations]
symbol:G3X8F3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GeneTree:ENSGT00620000087973 EMBL:DAAA02070440
EMBL:DAAA02070441 Ensembl:ENSBTAT00000066229 Uniprot:G3X8F3
Length = 522
Score = 150 (57.9 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 33/98 (33%), Positives = 55/98 (56%)
Query: 180 CTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKC-PLCRAVL-----FITPRTCAVSVT 233
C +C+++L EP+T PC H+ C++C + ++ N C P C + + T R V++
Sbjct: 16 CQICVEILIEPMTLPCNHTLCKACFKSTAEKTNLCCPSCHCQIAFWTWYHTQRNSLVNME 75
Query: 234 LNSIIQKNFPEEYAERKS--EHDSLINFGVDLMPLFVM 269
L IIQK+FPEE R S + + +IN D P+ ++
Sbjct: 76 LWEIIQKHFPEECKLRVSGQQSEEIIN---DCQPVHLL 110
>ZFIN|ZDB-GENE-060929-1066 [details] [associations]
symbol:btr16 "bloodthirsty-related gene family,
member 16" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-060929-1066 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00660000095328 EMBL:CR388163 IPI:IPI00860699
Ensembl:ENSDART00000105114 ArrayExpress:E7FBX8 Bgee:E7FBX8
Uniprot:E7FBX8
Length = 536
Score = 150 (57.9 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 175 TDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGN--KCPLCRAVLFITPRTCAVSV 232
+++ C++CL +P++TPCGH+FC+SCL Q + CPLC+ P ++
Sbjct: 14 SEELQCSICLDAFTDPVSTPCGHNFCKSCLNQCWNNSQTYNCPLCKETFNKKPEL-KINT 72
Query: 233 TLNSIIQKNFPEEYAERKSE 252
L ++Q F + ++E+ SE
Sbjct: 73 ALRQLVQV-FRQNFSEKTSE 91
>ZFIN|ZDB-GENE-060825-103 [details] [associations]
symbol:zgc:153151 "zgc:153151" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 ZFIN:ZDB-GENE-060825-103
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:CR318603 IPI:IPI00920283
Ensembl:ENSDART00000131053 GeneTree:ENSGT00700000105241 Bgee:E7F6W7
Uniprot:E7F6W7
Length = 471
Score = 149 (57.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 175 TDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGN--KCPLCRAVLFITPRTCAVSV 232
T++ C +CL + +P+TTPCGH+FC++CL Q D +CPLC+ P + +V
Sbjct: 37 TEECQCPVCLDVFTDPVTTPCGHNFCKTCLIQCWDNSQDYRCPLCKETFSKRPEVKSNTV 96
Query: 233 TLNSIIQ 239
L I+Q
Sbjct: 97 -LREIVQ 102
Score = 126 (49.4 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 168 IHGTPERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKC--PLCRAVLFITP 225
+H +++ C++CL + P+TTPCGH++C++CL + D + C P C+ P
Sbjct: 113 LHTDGPLSEELQCSVCLDVFNNPVTTPCGHNYCKTCLEKCWDYSHVCICPYCKETFSNRP 172
Query: 226 RTCAVSVTLNSIIQ 239
+ L I+Q
Sbjct: 173 -DLKCNTALREIVQ 185
>RGD|1594396 [details] [associations]
symbol:Trim25 "tripartite motif-containing 25" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0030054
"cell junction" evidence=ISO] [GO:0033280 "response to vitamin D"
evidence=IEP] [GO:0043627 "response to estrogen stimulus"
evidence=IEP] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 RGD:1594396 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043627
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0033280
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 eggNOG:NOG307017 CTD:7706
HOVERGEN:HBG101063 KO:K10652 OrthoDB:EOG42JNRQ HOGENOM:HOG000132974
IPI:IPI00421577 EMBL:BC061749 RefSeq:NP_001009536.1
UniGene:Rn.34382 ProteinModelPortal:Q6P7B3 STRING:Q6P7B3
PRIDE:Q6P7B3 GeneID:494338 KEGG:rno:494338 NextBio:697600
Genevestigator:Q6P7B3 Uniprot:Q6P7B3
Length = 643
Score = 143 (55.4 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQS-MDRGN--KCPLCRAVLFITPRTCAVSV 232
++ C++CL+ EP+TTPCGH+FCRSCL ++ + +G +CP CR V + P+ +V
Sbjct: 9 EELSCSICLEPFKEPVTTPCGHNFCRSCLNETWVVQGPPYRCPQCRTVYQVRPQLHKNTV 68
Query: 233 TLNSIIQKNFPEEYA 247
L +++++ E A
Sbjct: 69 -LCAVVEQFLQAEQA 82
Score = 51 (23.0 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 20/73 (27%), Positives = 31/73 (42%)
Query: 278 FPLHIFEPRYRLMVRRIMEGNHRMGMVIIDPTTGSVADFACEVEITECEP--LPDGRFVL 335
F H +P R ++RR ++R+ + P G C VE C P L L
Sbjct: 139 FQDHPLQPPVRDLLRRKCSRHNRLREMFC-PEHGECICHICLVEHKTCSPTILSQASADL 197
Query: 336 EIESRRRFRILRS 348
E + R++ I+ S
Sbjct: 198 ENKLRQKLTIMYS 210
>UNIPROTKB|E9PSR5 [details] [associations]
symbol:Trim25 "Protein Trim25" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 RGD:1594396 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0030054 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 IPI:IPI00948826
Ensembl:ENSRNOT00000003186 ArrayExpress:E9PSR5 Uniprot:E9PSR5
Length = 643
Score = 143 (55.4 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQS-MDRGN--KCPLCRAVLFITPRTCAVSV 232
++ C++CL+ EP+TTPCGH+FCRSCL ++ + +G +CP CR V + P+ +V
Sbjct: 9 EELSCSICLEPFKEPVTTPCGHNFCRSCLNETWVVQGPPYRCPQCRTVYQVRPQLHKNTV 68
Query: 233 TLNSIIQKNFPEEYA 247
L +++++ E A
Sbjct: 69 -LCAVVEQFLQAEQA 82
Score = 51 (23.0 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 20/73 (27%), Positives = 31/73 (42%)
Query: 278 FPLHIFEPRYRLMVRRIMEGNHRMGMVIIDPTTGSVADFACEVEITECEP--LPDGRFVL 335
F H +P R ++RR ++R+ + P G C VE C P L L
Sbjct: 139 FQDHPLQPPVRDLLRRKCSRHNRLREMFC-PEHGECICHICLVEHKTCSPTILSQASADL 197
Query: 336 EIESRRRFRILRS 348
E + R++ I+ S
Sbjct: 198 ENKLRQKLTIMYS 210
>ZFIN|ZDB-GENE-081031-80 [details] [associations]
symbol:btr21 "bloodthirsty-related gene family,
member 21" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-081031-80 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234136 GeneTree:ENSGT00660000095328 EMBL:CT030005
IPI:IPI00608496 Ensembl:ENSDART00000131989 Uniprot:F6P534
Length = 563
Score = 148 (57.2 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 175 TDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRG-N-KCPLCRAVLFITPRTCAVSV 232
++D C++CL + +P++TPCGH+FCRSCL + ++ N CP C+ P ++
Sbjct: 31 SEDLQCSVCLDVFTDPVSTPCGHNFCRSCLNKCWNKSWNYSCPNCKETFTQRP-DLKINT 89
Query: 233 TLNSIIQKNFPEEYAERKSE 252
+L I +++ E+ ERK+E
Sbjct: 90 SLREI-SEHYKEKRPERKAE 108
>UNIPROTKB|D6RAH9 [details] [associations]
symbol:LNX1 "E3 ubiquitin-protein ligase LNX" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0051260
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0042787 EMBL:AC058822 EMBL:AC095040
HGNC:HGNC:6657 EMBL:AC124017 IPI:IPI00966985
ProteinModelPortal:D6RAH9 SMR:D6RAH9 Ensembl:ENST00000510143
HOGENOM:HOG000207449 ArrayExpress:D6RAH9 Bgee:D6RAH9 Uniprot:D6RAH9
Length = 99
Score = 123 (48.4 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 26/79 (32%), Positives = 42/79 (53%)
Query: 162 SLIGRRIHGTPERTDD-FDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAV 220
SL + PE DD C +CL+ L +P+ TPCGH++C CL + + CP+ R
Sbjct: 22 SLEENHFYSYPEEVDDDLICHICLQALLDPLDTPCGHTYCTLCLTNFLVEKDFCPMDRKP 81
Query: 221 LFITPRTCAVS-VTLNSII 238
L + + C S + +N ++
Sbjct: 82 LVL--QHCKKSSILVNKLL 98
>ZFIN|ZDB-GENE-060126-4 [details] [associations]
symbol:ftr79 "finTRIM family, member 79" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-060126-4 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX248515 eggNOG:KOG2177 OrthoDB:EOG4R23TJ
GeneTree:ENSGT00670000097622 HOVERGEN:HBG106862 IPI:IPI00485240
UniGene:Dr.119551 Ensembl:ENSDART00000132556 InParanoid:Q5RIK0
OMA:GACICAF Uniprot:Q5RIK0
Length = 341
Score = 143 (55.4 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 27/82 (32%), Positives = 45/82 (54%)
Query: 173 ERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGN----KCPLCRAVLFITP--- 225
E D + C++CL LL +P+T PCGHS+C SC+ + ++ KCP CR P
Sbjct: 7 ENNDQYSCSVCLDLLKDPVTIPCGHSYCMSCINECWNKDQNGPYKCPQCRQTFSSKPPLN 66
Query: 226 RTCAVSVTLNSIIQKNFPEEYA 247
R+ ++ ++++ K P+ A
Sbjct: 67 RSTVLAEIMDNLRAKESPQSPA 88
>ZFIN|ZDB-GENE-060421-3827 [details] [associations]
symbol:btr32 "bloodthirsty-related gene family,
member 32" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-060421-3827 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
OrthoDB:EOG4KWJSP eggNOG:NOG291505 HOGENOM:HOG000234136
HOVERGEN:HBG106862 GeneTree:ENSGT00660000095328 EMBL:CU914158
EMBL:BC115345 IPI:IPI00758736 RefSeq:XP_003201305.1
UniGene:Dr.89408 SMR:Q1RLP5 Ensembl:ENSDART00000076048
GeneID:678629 KEGG:dre:678629 CTD:678629 NextBio:20902445
Uniprot:Q1RLP5
Length = 531
Score = 146 (56.5 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 36/117 (30%), Positives = 61/117 (52%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKC--PLCRAVLFITPRTCAVSVT 233
++ C++CL + +P+TTPCGH+FCR+CL Q + C P+C+ P V+ T
Sbjct: 10 EELQCSICLDVFTDPVTTPCGHNFCRTCLDQYWTNTHTCCCPICKEKFSKQP-DLKVNTT 68
Query: 234 LNSIIQKNFPEEYAERKSEHDSLINFGVDLMPLFVMDVVIPCQR-FPLHIFEPRYRL 289
L ++Q +F ++ + +SE L + D V + CQ + + EP YR+
Sbjct: 69 LREVVQ-HFNQQLSLGESE--VLCDICEDRKQKAVKSC-LTCQSSYCENHLEPHYRV 121
>ZFIN|ZDB-GENE-080213-2 [details] [associations]
symbol:btr18 "bloodthirsty-related gene family,
member 18" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
ZFIN:ZDB-GENE-080213-2 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00660000095328 EMBL:CT030005
Ensembl:ENSDART00000013850 Bgee:I3IT62 Uniprot:I3IT62
Length = 533
Score = 146 (56.5 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 175 TDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGN--KCPLCRAVLFITPRTCAVSV 232
+++ C++CL++ +P++TPCGH+FCRSCL + + CP C+ P ++
Sbjct: 7 SEELQCSVCLEVFTDPVSTPCGHNFCRSCLNKCWNNSETCSCPYCKETFTQRP-DLKINT 65
Query: 233 TLNSIIQKNFPEEYAERKSE 252
TL I +++ E+ E K+E
Sbjct: 66 TLREI-SEHYKEKKPEEKAE 84
>ZFIN|ZDB-GENE-080212-7 [details] [associations]
symbol:zgc:173581 "zgc:173581" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-080212-7 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 KO:K12015
HOVERGEN:HBG106862 EMBL:BC154144 IPI:IPI00877475
RefSeq:NP_001108173.1 UniGene:Dr.146601 ProteinModelPortal:A8KBK1
GeneID:100137104 KEGG:dre:100137104 NextBio:20789398 Uniprot:A8KBK1
Length = 554
Score = 146 (56.5 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 175 TDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGN--KCPLCRAVLFITPRTCAVSV 232
+++ C++CL++ +P++TPCGH+FC+SCL + + CP C+ P ++
Sbjct: 33 SEELQCSICLEVFTDPVSTPCGHNFCKSCLNKCWNNSQTCSCPYCKETFTQRP-DLKINT 91
Query: 233 TLNSIIQKNFPEEYAERKSE 252
TL I Q ++ E+ E K+E
Sbjct: 92 TLREISQ-HYKEKRPEEKAE 110
>ZFIN|ZDB-GENE-030131-5243 [details] [associations]
symbol:rnf2 "ring finger protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0033339 "pectoral fin development" evidence=IMP] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0016604 "nuclear body"
evidence=ISS] [GO:0009948 "anterior/posterior axis specification"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0000278
"mitotic cell cycle" evidence=ISS] [GO:0035102 "PRC1 complex"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
ZFIN:ZDB-GENE-030131-5243 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0033339 GO:GO:0071339
GO:GO:0035102 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 EMBL:AY576996
EMBL:BC044472 EMBL:AF196346 IPI:IPI00499481 RefSeq:NP_571288.1
UniGene:Dr.31086 ProteinModelPortal:Q803I4 SMR:Q803I4 STRING:Q803I4
Ensembl:ENSDART00000017034 GeneID:327035 KEGG:dre:327035 CTD:6045
InParanoid:Q803I4 OrthoDB:EOG4R7VB1 NextBio:20809851 Bgee:Q803I4
Uniprot:Q803I4
Length = 336
Score = 142 (55.0 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 37/112 (33%), Positives = 55/112 (49%)
Query: 142 VDPFSNPLQASLQNLERTTASLI--GRRIHGTPERT-DDFDCTLCLKLLYEPITTP-CGH 197
V P S + SL L+RT I G I +P + C +CL +L +TT C H
Sbjct: 10 VQPLSKTWELSLYELQRTPQEAITDGLEIAVSPRSLHSELMCPICLDMLKNTMTTKECLH 69
Query: 198 SFCRSCLFQSMDRGNK-CPLCRAVLFITPRTCAVSVTLNSIIQKNFP--EEY 246
FC C+ ++ GNK CP CR L ++ R+ +++I K +P +EY
Sbjct: 70 RFCADCIITALRSGNKECPTCRKKL-VSKRSLRPDPNFDALISKIYPSRDEY 120
>UNIPROTKB|D6RAS2 [details] [associations]
symbol:TRIM60 "Tripartite motif-containing protein 60"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000234133 HGNC:HGNC:21162
EMBL:AC106872 IPI:IPI00967237 ProteinModelPortal:D6RAS2 SMR:D6RAS2
Ensembl:ENST00000507119 ArrayExpress:D6RAS2 Bgee:D6RAS2
Uniprot:D6RAS2
Length = 90
Score = 122 (48.0 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCL---FQSMDRGNKCPLCR 218
++ C +CL+ L +P+T CGH+FCRSCL ++ +D CP+CR
Sbjct: 12 EESSCPICLEYLKDPVTINCGHNFCRSCLSVSWKDLDDTFPCPVCR 57
>UNIPROTKB|D6RB76 [details] [associations]
symbol:LNX1 "E3 ubiquitin-protein ligase LNX" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0051260
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0042787 EMBL:AC058822 EMBL:AC095040
HGNC:HGNC:6657 EMBL:AC124017 IPI:IPI00967553
ProteinModelPortal:D6RB76 SMR:D6RB76 Ensembl:ENST00000512247
ArrayExpress:D6RB76 Bgee:D6RB76 Uniprot:D6RB76
Length = 90
Score = 121 (47.7 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 162 SLIGRRIHGTPERTDD-FDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAV 220
SL + PE DD C +CL+ L +P+ TPCGH++C CL + + CP+ R
Sbjct: 22 SLEENHFYSYPEEVDDDLICHICLQALLDPLDTPCGHTYCTLCLTNFLVEKDFCPMDRKP 81
Query: 221 LFI 223
L +
Sbjct: 82 LVL 84
>UNIPROTKB|D4A0Y0 [details] [associations]
symbol:D4A0Y0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104499 EMBL:AC113720
IPI:IPI00359118 Ensembl:ENSRNOT00000030827 Uniprot:D4A0Y0
Length = 151
Score = 121 (47.7 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 27/79 (34%), Positives = 43/79 (54%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCL---FQS---MDRGNKCPLCRAV-LF--ITPR 226
++ C +CL+LL EP++T C HSFCR+C+ ++S + CP+CR LF + P
Sbjct: 11 EEVTCPICLELLKEPVSTDCNHSFCRACITINYESNRNTEGEGSCPVCRVCYLFRNLRPN 70
Query: 227 TCAVSVTLNSIIQKNFPEE 245
++ K+ PEE
Sbjct: 71 RHVANIVERLKGFKSIPEE 89
>ZFIN|ZDB-GENE-020620-2 [details] [associations]
symbol:bty "bloodthirsty" species:7955 "Danio rerio"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0030218 "erythrocyte differentiation"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-020620-2
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 GO:GO:0030218 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HOVERGEN:HBG106862 IPI:IPI00962937
EMBL:AY454307 RefSeq:NP_001018311.1 UniGene:Dr.23709
ProteinModelPortal:Q5DSV6 PRIDE:Q5DSV6 GeneID:246711
KEGG:dre:246711 CTD:246711 NextBio:20797216 Uniprot:Q5DSV6
Length = 532
Score = 144 (55.7 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 25/80 (31%), Positives = 47/80 (58%)
Query: 175 TDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGN--KCPLCRAVLFITPRTCAVSV 232
+++ C++CL++ +P++TPCGH+FC+SCL + + CP C+ P ++
Sbjct: 9 SEELQCSICLEVFTDPVSTPCGHNFCKSCLNKCWNNSQTCSCPYCKETFTQRP-DLKINT 67
Query: 233 TLNSIIQKNFPEEYAERKSE 252
TL I +++ E+ E K+E
Sbjct: 68 TLREI-SEHYKEKRPEEKAE 86
>UNIPROTKB|Q48CY0 [details] [associations]
symbol:PSPPH_4657 "ATP-dependent protease La domain
protein" species:264730 "Pseudomonas syringae pv. phaseolicola
1448A" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003111 Pfam:PF02190
GO:GO:0006508 EMBL:CP000058 GenomeReviews:CP000058_GR
InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0004176 eggNOG:COG2802
KO:K07157 HOGENOM:HOG000264786 RefSeq:YP_276762.1
ProteinModelPortal:Q48CY0 STRING:Q48CY0 GeneID:3559172
KEGG:psp:PSPPH_4657 PATRIC:19978811 OMA:VCITEGS
ProtClustDB:CLSK868385 Uniprot:Q48CY0
Length = 196
Score = 132 (51.5 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 40/132 (30%), Positives = 65/132 (49%)
Query: 264 MPLFVMDVVI-PCQRFPLHIFEPRYRLMVRRIMEGNHRMGMVIIDPTT------GSVADF 316
+PLF ++ V+ P L +FE RY M+ R M+ G+V I + G +
Sbjct: 3 LPLFPLNAVLFPGCVLDLQLFEARYLDMIGRCMKQGEGFGVVCITEGSEVGTVPGGYSPI 62
Query: 317 ACEVEITECEPLPDGRFVLEIESRRRFRILRSWDQ-DGYRVAEIEWVQD-IHPEGVEDRA 374
CE +T+ + +G + + RRFR++ + Q D VAE+EW+Q+ + E+ A
Sbjct: 63 GCEALVTDFQQQDNGLLGIRVVGGRRFRVVAAEVQRDQLLVAEVEWLQEPVERPLQEEDA 122
Query: 375 DLQDLTNNAAEY 386
DL L AE+
Sbjct: 123 DLVALLEALAEH 134
>UNIPROTKB|Q9KPR3 [details] [associations]
symbol:VC_2303 "Putative uncharacterized protein"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003111 Pfam:PF02190 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006508 InterPro:IPR015947
SUPFAM:SSF88697 GO:GO:0004176 KO:K07157 OMA:ANRWCEL PIR:H82091
RefSeq:NP_231934.1 ProteinModelPortal:Q9KPR3 DNASU:2613099
GeneID:2613099 KEGG:vch:VC2303 PATRIC:20083645
ProtClustDB:CLSK794638 Uniprot:Q9KPR3
Length = 193
Score = 131 (51.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 34/107 (31%), Positives = 54/107 (50%)
Query: 263 LMPLFVMDVVIPCQRFPLHIFEPRYRLMVRRIMEGNHRMGMVIIDPTTGS----VADFAC 318
L PL VV+P + L IFEPRY+ MV + + G+ + D + +++F
Sbjct: 6 LFPL--SSVVLPEGKMKLRIFEPRYQRMVAQCSKTGSGFGLCLFDSKSNKNANELSEFGT 63
Query: 319 EVEITECEPLPDGRFVLEIESRRRFRILR-SWDQDGYRVAEIEWVQD 364
V+I + E L DG + + RRF I + + DG R+A ++W D
Sbjct: 64 LVKIVDFETLSDGLLGITVVGIRRFAIRKVRVEYDGLRIATVQWFPD 110
>TIGR_CMR|VC_2303 [details] [associations]
symbol:VC_2303 "conserved hypothetical protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003111
Pfam:PF02190 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006508
InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0004176 KO:K07157
OMA:ANRWCEL PIR:H82091 RefSeq:NP_231934.1 ProteinModelPortal:Q9KPR3
DNASU:2613099 GeneID:2613099 KEGG:vch:VC2303 PATRIC:20083645
ProtClustDB:CLSK794638 Uniprot:Q9KPR3
Length = 193
Score = 131 (51.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 34/107 (31%), Positives = 54/107 (50%)
Query: 263 LMPLFVMDVVIPCQRFPLHIFEPRYRLMVRRIMEGNHRMGMVIIDPTTGS----VADFAC 318
L PL VV+P + L IFEPRY+ MV + + G+ + D + +++F
Sbjct: 6 LFPL--SSVVLPEGKMKLRIFEPRYQRMVAQCSKTGSGFGLCLFDSKSNKNANELSEFGT 63
Query: 319 EVEITECEPLPDGRFVLEIESRRRFRILR-SWDQDGYRVAEIEWVQD 364
V+I + E L DG + + RRF I + + DG R+A ++W D
Sbjct: 64 LVKIVDFETLSDGLLGITVVGIRRFAIRKVRVEYDGLRIATVQWFPD 110
>UNIPROTKB|C9JWN8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HOGENOM:HOG000234134 HGNC:HGNC:16276 ChiTaRS:TRIM5
EMBL:AC109341 IPI:IPI00749246 ProteinModelPortal:C9JWN8 SMR:C9JWN8
STRING:C9JWN8 Ensembl:ENST00000419850 ArrayExpress:C9JWN8
Bgee:C9JWN8 Uniprot:C9JWN8
Length = 72
Score = 120 (47.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 22/49 (44%), Positives = 35/49 (71%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLF----QSM-DRG-NKCPLCR 218
++ C +CL+LL +P++ CGHSFC++CL +SM D+G + CP+CR
Sbjct: 11 EEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCR 59
>ZFIN|ZDB-GENE-060825-228 [details] [associations]
symbol:btr02 "bloodthirsty-related gene family,
member 2" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-060825-228 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234136 HOVERGEN:HBG106862 EMBL:BC122154
IPI:IPI00619636 UniGene:Dr.72357 ProteinModelPortal:Q0P4C7
eggNOG:NOG283002 OrthoDB:EOG4H4640 NextBio:20884412
ArrayExpress:Q0P4C7 Uniprot:Q0P4C7
Length = 438
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 30/81 (37%), Positives = 46/81 (56%)
Query: 178 FDCTLCLKLLYEPITTPCGHSFCRSCL--FQSMDRGNKCPLCRAVLFITPRTCAVSVTLN 235
F C+LC ++ P+TTPCGHSFC++CL + S ++CPLCR PR +V+ L
Sbjct: 13 FLCSLCEEIFSNPVTTPCGHSFCKACLRVYWSRSGSDECPLCRKAFGSRPRL-SVNRILA 71
Query: 236 SIIQKNFPEEYAERKSEHDSL 256
+ + N+ + KS S+
Sbjct: 72 DVTE-NYRKTCLAAKSRFFSM 91
>RGD|1305491 [details] [associations]
symbol:Rnf2 "ring finger protein 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000151
"ubiquitin ligase complex" evidence=ISO;ISS] [GO:0000278 "mitotic
cell cycle" evidence=IEA;ISO] [GO:0001702 "gastrulation with mouth
forming second" evidence=IEA;ISO] [GO:0001739 "sex chromatin"
evidence=IEA;ISO] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISO;ISS] [GO:0009948 "anterior/posterior axis
specification" evidence=IEA;ISO] [GO:0016574 "histone
ubiquitination" evidence=ISO] [GO:0016604 "nuclear body"
evidence=IEA;ISO] [GO:0031519 "PcG protein complex"
evidence=ISO;ISS] [GO:0035102 "PRC1 complex" evidence=ISO;ISS]
[GO:0035518 "histone H2A monoubiquitination" evidence=IEA;ISO]
[GO:0071339 "MLL1 complex" evidence=ISO;ISS] [GO:0071535 "RING-like
zinc finger domain binding" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 RGD:1305491 Prosite:PS00518
GO:GO:0005694 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0035102 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 CTD:6045
OrthoDB:EOG4R7VB1 EMBL:BC098941 IPI:IPI00950204
RefSeq:NP_001020838.1 UniGene:Rn.19719 ProteinModelPortal:Q4KLY4
SMR:Q4KLY4 STRING:Q4KLY4 PhosphoSite:Q4KLY4
Ensembl:ENSRNOT00000065944 GeneID:304850 KEGG:rno:304850
UCSC:RGD:1305491 InParanoid:Q4KLY4 NextBio:653721
ArrayExpress:Q4KLY4 Genevestigator:Q4KLY4
GermOnline:ENSRNOG00000002454 Uniprot:Q4KLY4
Length = 308
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 41/135 (30%), Positives = 64/135 (47%)
Query: 131 MARDAILSGLQVDPFSNPLQASLQNLERTTASLI--GRRIHGTPERT-DDFDCTLCLKLL 187
M++ +G Q P S + SL L+RT I G I +P + C +CL +L
Sbjct: 1 MSQAVQTNGTQ--PLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDML 58
Query: 188 YEPITTP-CGHSFCRSCLFQSMDRGNK-CPLCRAVLFITPRTCAVSVTLNSIIQKNFP-- 243
+TT C H FC C+ ++ GNK CP CR L ++ R+ +++I K +P
Sbjct: 59 KNTMTTKECLHRFCADCIITALRSGNKECPTCRKKL-VSKRSLRPDPNFDALISKIYPSR 117
Query: 244 EEYAERKSEHDSLIN 258
+EY + + IN
Sbjct: 118 DEYEAHQERVLARIN 132
>UNIPROTKB|A6QLQ0 [details] [associations]
symbol:RNF2 "RNF2 protein" species:9913 "Bos taurus"
[GO:0071535 "RING-like zinc finger domain binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=IEA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0035102 "PRC1 complex"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0009948
"anterior/posterior axis specification" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0000278
"mitotic cell cycle" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 GO:GO:0000122
GO:GO:0001702 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0009948 GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907
GO:GO:0071339 GO:GO:0000278 GO:GO:0035518 GO:GO:0035102
GO:GO:0001739 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 OMA:MELYFAP
CTD:6045 OrthoDB:EOG4R7VB1 EMBL:DAAA02043606 EMBL:BC148044
IPI:IPI00867396 RefSeq:NP_001094673.1 UniGene:Bt.102990 SMR:A6QLQ0
STRING:A6QLQ0 Ensembl:ENSBTAT00000000025 GeneID:540090
KEGG:bta:540090 InParanoid:A6QLQ0 NextBio:20878411 Uniprot:A6QLQ0
Length = 336
Score = 139 (54.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 41/135 (30%), Positives = 64/135 (47%)
Query: 131 MARDAILSGLQVDPFSNPLQASLQNLERTTASLI--GRRIHGTPERT-DDFDCTLCLKLL 187
M++ +G Q P S + SL L+RT I G I +P + C +CL +L
Sbjct: 1 MSQAVQTNGTQ--PLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDML 58
Query: 188 YEPITTP-CGHSFCRSCLFQSMDRGNK-CPLCRAVLFITPRTCAVSVTLNSIIQKNFP-- 243
+TT C H FC C+ ++ GNK CP CR L ++ R+ +++I K +P
Sbjct: 59 KNTMTTKECLHRFCADCIITALRSGNKECPTCRKKL-VSKRSLRPDPNFDALISKIYPSR 117
Query: 244 EEYAERKSEHDSLIN 258
+EY + + IN
Sbjct: 118 DEYEAHQERVLARIN 132
>UNIPROTKB|Q99496 [details] [associations]
symbol:RNF2 "E3 ubiquitin-protein ligase RING2"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000278 "mitotic cell cycle" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0001739
"sex chromatin" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071339 "MLL1 complex"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031519 "PcG
protein complex" evidence=IDA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IDA] [GO:0035102 "PRC1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0071535
"RING-like zinc finger domain binding" evidence=IPI] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 EMBL:CH471067 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009948 GO:GO:0016604 GO:GO:0000151
InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278 CleanEx:HS_BAP1
GO:GO:0035518 GO:GO:0035102 PDB:2H0D PDB:3RPG PDBsum:2H0D
PDBsum:3RPG PDB:3GS2 PDBsum:3GS2 GO:GO:0001739 EMBL:AL109865
eggNOG:NOG324386 HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695
OMA:MELYFAP CTD:6045 OrthoDB:EOG4R7VB1 EMBL:Y10571 EMBL:AF141327
EMBL:AK314793 EMBL:BC012583 IPI:IPI00026993 RefSeq:NP_009143.1
UniGene:Hs.591490 PDB:3H8H PDB:3IXS PDBsum:3H8H PDBsum:3IXS
ProteinModelPortal:Q99496 SMR:Q99496 DIP:DIP-40034N IntAct:Q99496
MINT:MINT-1420125 STRING:Q99496 PhosphoSite:Q99496 DMDM:62901044
PaxDb:Q99496 PRIDE:Q99496 DNASU:6045 Ensembl:ENST00000367510
Ensembl:ENST00000453650 GeneID:6045 KEGG:hsa:6045 UCSC:uc001grc.1
GeneCards:GC01P185014 HGNC:HGNC:10061 HPA:HPA026803 MIM:608985
neXtProt:NX_Q99496 PharmGKB:PA34426 InParanoid:Q99496
PhylomeDB:Q99496 EvolutionaryTrace:Q99496 GenomeRNAi:6045
NextBio:23553 ArrayExpress:Q99496 Bgee:Q99496 CleanEx:HS_RNF2
Genevestigator:Q99496 GermOnline:ENSG00000121481 Uniprot:Q99496
Length = 336
Score = 139 (54.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 41/135 (30%), Positives = 64/135 (47%)
Query: 131 MARDAILSGLQVDPFSNPLQASLQNLERTTASLI--GRRIHGTPERT-DDFDCTLCLKLL 187
M++ +G Q P S + SL L+RT I G I +P + C +CL +L
Sbjct: 1 MSQAVQTNGTQ--PLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDML 58
Query: 188 YEPITTP-CGHSFCRSCLFQSMDRGNK-CPLCRAVLFITPRTCAVSVTLNSIIQKNFP-- 243
+TT C H FC C+ ++ GNK CP CR L ++ R+ +++I K +P
Sbjct: 59 KNTMTTKECLHRFCADCIITALRSGNKECPTCRKKL-VSKRSLRPDPNFDALISKIYPSR 117
Query: 244 EEYAERKSEHDSLIN 258
+EY + + IN
Sbjct: 118 DEYEAHQERVLARIN 132
>UNIPROTKB|F1S3N6 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071535 "RING-like zinc finger domain binding"
evidence=IEA] [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0035518
"histone H2A monoubiquitination" evidence=IEA] [GO:0035102 "PRC1
complex" evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA]
[GO:0009948 "anterior/posterior axis specification" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001739 "sex chromatin"
evidence=IEA] [GO:0001702 "gastrulation with mouth forming second"
evidence=IEA] [GO:0000278 "mitotic cell cycle" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278
GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 KO:K10695 OMA:MELYFAP EMBL:CU915492
RefSeq:XP_003130427.1 Ensembl:ENSSSCT00000016959 GeneID:100517846
KEGG:ssc:100517846 Uniprot:F1S3N6
Length = 336
Score = 139 (54.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 41/135 (30%), Positives = 64/135 (47%)
Query: 131 MARDAILSGLQVDPFSNPLQASLQNLERTTASLI--GRRIHGTPERT-DDFDCTLCLKLL 187
M++ +G Q P S + SL L+RT I G I +P + C +CL +L
Sbjct: 1 MSQAVQTNGTQ--PLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDML 58
Query: 188 YEPITTP-CGHSFCRSCLFQSMDRGNK-CPLCRAVLFITPRTCAVSVTLNSIIQKNFP-- 243
+TT C H FC C+ ++ GNK CP CR L ++ R+ +++I K +P
Sbjct: 59 KNTMTTKECLHRFCADCIITALRSGNKECPTCRKKL-VSKRSLRPDPNFDALISKIYPSR 117
Query: 244 EEYAERKSEHDSLIN 258
+EY + + IN
Sbjct: 118 DEYEAHQERVLARIN 132
>UNIPROTKB|Q5R9J5 [details] [associations]
symbol:RNF2 "E3 ubiquitin-protein ligase RING2"
species:9601 "Pongo abelii" [GO:0000151 "ubiquitin ligase complex"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0031519 "PcG protein complex" evidence=ISS] [GO:0035102 "PRC1
complex" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005694 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0006351
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000151
InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102 HOVERGEN:HBG079942
KO:K10695 CTD:6045 EMBL:CR859392 RefSeq:NP_001127433.1
UniGene:Pab.7792 ProteinModelPortal:Q5R9J5 SMR:Q5R9J5 PRIDE:Q5R9J5
GeneID:100174504 KEGG:pon:100174504 InParanoid:Q5R9J5
Uniprot:Q5R9J5
Length = 336
Score = 139 (54.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 41/135 (30%), Positives = 64/135 (47%)
Query: 131 MARDAILSGLQVDPFSNPLQASLQNLERTTASLI--GRRIHGTPERT-DDFDCTLCLKLL 187
M++ +G Q P S + SL L+RT I G I +P + C +CL +L
Sbjct: 1 MSQAVQTNGTQ--PLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDML 58
Query: 188 YEPITTP-CGHSFCRSCLFQSMDRGNK-CPLCRAVLFITPRTCAVSVTLNSIIQKNFP-- 243
+TT C H FC C+ ++ GNK CP CR L ++ R+ +++I K +P
Sbjct: 59 KNTMTTKECLHRFCADCIITALRSGNKECPTCRKKL-VSKRSLRPDPNFDALISKIYPSR 117
Query: 244 EEYAERKSEHDSLIN 258
+EY + + IN
Sbjct: 118 DEYEAHQERVLARIN 132
>MGI|MGI:1101759 [details] [associations]
symbol:Rnf2 "ring finger protein 2" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IMP] [GO:0000151 "ubiquitin
ligase complex" evidence=ISO;IDA] [GO:0000278 "mitotic cell cycle"
evidence=IMP] [GO:0001702 "gastrulation with mouth forming second"
evidence=IMP] [GO:0001739 "sex chromatin" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=ISO] [GO:0009948 "anterior/posterior axis
specification" evidence=IMP] [GO:0016574 "histone ubiquitination"
evidence=IGI;IDA] [GO:0016604 "nuclear body" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=ISO;IDA] [GO:0035102 "PRC1 complex"
evidence=ISO] [GO:0035518 "histone H2A monoubiquitination"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=ISO] [GO:0071535 "RING-like
zinc finger domain binding" evidence=ISO] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1101759
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278
GO:GO:0035518 GO:GO:0031519 GO:GO:0035102 GO:GO:0016574 PDB:2CKL
PDBsum:2CKL GO:GO:0001739 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:MELYFAP CTD:6045 OrthoDB:EOG4R7VB1
EMBL:Y12880 EMBL:Y12783 EMBL:AK145767 EMBL:AK012358 EMBL:AK013124
EMBL:AK030319 EMBL:AK090066 EMBL:CT010297 EMBL:BC020122
IPI:IPI00133880 RefSeq:NP_035407.1 UniGene:Mm.474038
ProteinModelPortal:Q9CQJ4 SMR:Q9CQJ4 IntAct:Q9CQJ4
MINT:MINT-1341250 STRING:Q9CQJ4 PhosphoSite:Q9CQJ4 PaxDb:Q9CQJ4
PRIDE:Q9CQJ4 Ensembl:ENSMUST00000076110 GeneID:19821 KEGG:mmu:19821
UCSC:uc007cyx.1 InParanoid:Q9CQJ4 EvolutionaryTrace:Q9CQJ4
NextBio:297285 Bgee:Q9CQJ4 CleanEx:MM_RNF2 Genevestigator:Q9CQJ4
GermOnline:ENSMUSG00000026484 Uniprot:Q9CQJ4
Length = 336
Score = 139 (54.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 41/135 (30%), Positives = 64/135 (47%)
Query: 131 MARDAILSGLQVDPFSNPLQASLQNLERTTASLI--GRRIHGTPERT-DDFDCTLCLKLL 187
M++ +G Q P S + SL L+RT I G I +P + C +CL +L
Sbjct: 1 MSQAVQTNGTQ--PLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDML 58
Query: 188 YEPITTP-CGHSFCRSCLFQSMDRGNK-CPLCRAVLFITPRTCAVSVTLNSIIQKNFP-- 243
+TT C H FC C+ ++ GNK CP CR L ++ R+ +++I K +P
Sbjct: 59 KNTMTTKECLHRFCADCIITALRSGNKECPTCRKKL-VSKRSLRPDPNFDALISKIYPSR 117
Query: 244 EEYAERKSEHDSLIN 258
+EY + + IN
Sbjct: 118 DEYEAHQERVLARIN 132
>UNIPROTKB|E2RFW1 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071535 "RING-like zinc finger domain
binding" evidence=IEA] [GO:0071339 "MLL1 complex" evidence=IEA]
[GO:0035518 "histone H2A monoubiquitination" evidence=IEA]
[GO:0035102 "PRC1 complex" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001739 "sex
chromatin" evidence=IEA] [GO:0001702 "gastrulation with mouth
forming second" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0000122 GO:GO:0001702
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0000278 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 OMA:MELYFAP EMBL:AAEX03005159
Ensembl:ENSCAFT00000021407 Uniprot:E2RFW1
Length = 337
Score = 139 (54.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 41/135 (30%), Positives = 64/135 (47%)
Query: 131 MARDAILSGLQVDPFSNPLQASLQNLERTTASLI--GRRIHGTPERT-DDFDCTLCLKLL 187
M++ +G Q P S + SL L+RT I G I +P + C +CL +L
Sbjct: 1 MSQAVQTNGTQ--PLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDML 58
Query: 188 YEPITTP-CGHSFCRSCLFQSMDRGNK-CPLCRAVLFITPRTCAVSVTLNSIIQKNFP-- 243
+TT C H FC C+ ++ GNK CP CR L ++ R+ +++I K +P
Sbjct: 59 KNTMTTKECLHRFCADCIITALRSGNKECPTCRKKL-VSKRSLRPDPNFDALISKIYPSR 117
Query: 244 EEYAERKSEHDSLIN 258
+EY + + IN
Sbjct: 118 DEYEAHQERVLARIN 132
>ZFIN|ZDB-GENE-030616-515 [details] [associations]
symbol:ftr53 "finTRIM family, member 53"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-030616-515 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00670000097622 EMBL:BX510646 IPI:IPI00866649
Ensembl:ENSDART00000060425 Bgee:F1R783 Uniprot:F1R783
Length = 545
Score = 142 (55.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLF----QSMDRG-NKCPLCRAVLFITPR-TCA 229
D+F+C +CL LL +P+T PCGHS+C+SC+ Q RG CP CR +PR T
Sbjct: 9 DEFNCPVCLDLLNDPVTIPCGHSYCKSCITGCWNQEDQRGVYSCPQCRQAY--SPRPTLG 66
Query: 230 VSVTLNSIIQK 240
+ L +++K
Sbjct: 67 KNTILGEMVEK 77
>ZFIN|ZDB-GENE-080402-4 [details] [associations]
symbol:btr22 "bloodthirsty-related gene family,
member 22" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-080402-4 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 HOVERGEN:HBG106862
GeneTree:ENSGT00660000095328 EMBL:CT030005 IPI:IPI00632223
Ensembl:ENSDART00000135762 Bgee:F6NQA8 Uniprot:F6NQA8
Length = 551
Score = 142 (55.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 25/80 (31%), Positives = 47/80 (58%)
Query: 175 TDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGN--KCPLCRAVLFITPRTCAVSV 232
+++ C++CL++ +P++TPCGH+FC+SCL + + CP C+ P ++
Sbjct: 29 SEELQCSICLEVFTDPVSTPCGHNFCKSCLNKCWNNSKTCSCPNCKETFTQRP-DLKINT 87
Query: 233 TLNSIIQKNFPEEYAERKSE 252
TL I +++ E+ E K+E
Sbjct: 88 TLREI-SEHYKEKKPEEKAE 106
>UNIPROTKB|F1S705 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005925 "focal adhesion" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0046872 GO:GO:0008270 GO:GO:0005925 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00700000104377
EMBL:CU638728 EMBL:CU855662 Ensembl:ENSSSCT00000016896
Uniprot:F1S705
Length = 425
Score = 140 (54.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 161 ASLIGRRIHGTPERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAV 220
A L I+ ++++DF C +C ++ E T CGHSFC C+ QS++ N+CP C V
Sbjct: 116 APLCNGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYV 175
Query: 221 L 221
+
Sbjct: 176 V 176
>UNIPROTKB|A2AAZ5 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOVERGEN:HBG001357 HOGENOM:HOG000234134
EMBL:AL662832 EMBL:AL662795 EMBL:AL773535 EMBL:BX294158
EMBL:CR759928 EMBL:BX927214 EMBL:CR759281 EMBL:BX248580
HGNC:HGNC:10065 IPI:IPI00796458 SMR:A2AAZ5 Ensembl:ENST00000411711
Ensembl:ENST00000416213 Ensembl:ENST00000424571
Ensembl:ENST00000430414 Ensembl:ENST00000453856
Ensembl:ENST00000456425 Ensembl:ENST00000458516 Uniprot:A2AAZ5
Length = 144
Score = 118 (46.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 26/91 (28%), Positives = 49/91 (53%)
Query: 180 CTLCLKLLYEPITTPCGHSFCRSCL---FQSMDRGNKCPLCRAVLFITPRTCAVSVTLNS 236
C++CL+ L EP+ CGH+FC++C+ ++ ++R CP+CR R+ + L S
Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRY--RSLRPNRQLGS 86
Query: 237 IIQKNFPEEYAERKSEHDSLINFGVDLMPLF 267
+++ + +RK +SL + + LF
Sbjct: 87 MVEIAKQLQAVKRKIRDESLCPQHHEALSLF 117
>UNIPROTKB|E1BQF7 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0001702 "gastrulation with mouth forming second"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0035102
"PRC1 complex" evidence=IEA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0071339 "MLL1 complex"
evidence=IEA] [GO:0071535 "RING-like zinc finger domain binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0000278 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 KO:K10695 OMA:MELYFAP CTD:6045
EMBL:AADN02034211 IPI:IPI00572800 RefSeq:XP_422295.2
ProteinModelPortal:E1BQF7 Ensembl:ENSGALT00000007706 GeneID:424452
KEGG:gga:424452 NextBio:20826782 Uniprot:E1BQF7
Length = 336
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 39/123 (31%), Positives = 60/123 (48%)
Query: 131 MARDAILSGLQVDPFSNPLQASLQNLERTTASLI--GRRIHGTPERT-DDFDCTLCLKLL 187
M++ +G Q P S + SL L+RT I G I +P + C +CL +L
Sbjct: 1 MSQAVQANGTQ--PLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDML 58
Query: 188 YEPITTP-CGHSFCRSCLFQSMDRGNK-CPLCRAVLFITPRTCAVSVTLNSIIQKNFP-- 243
+TT C H FC C+ ++ GNK CP CR L ++ R+ +++I K +P
Sbjct: 59 KNTMTTKECLHRFCADCIITALRSGNKECPTCRKKL-VSKRSLRPDPNFDALISKIYPSR 117
Query: 244 EEY 246
+EY
Sbjct: 118 DEY 120
>TAIR|locus:2049023 [details] [associations]
symbol:AT2G23780 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0006661 "phosphatidylinositol biosynthetic
process" evidence=RCA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC004482 HOGENOM:HOG000238304 KO:K10666 eggNOG:NOG300581
HSSP:P22681 EMBL:BT008560 EMBL:BT008701 EMBL:AK229514
IPI:IPI00539367 PIR:T02413 RefSeq:NP_179958.1 UniGene:At.12626
ProteinModelPortal:O64824 SMR:O64824 EnsemblPlants:AT2G23780.1
GeneID:816910 KEGG:ath:AT2G23780 TAIR:At2g23780 InParanoid:O64824
OMA:VNGESST PhylomeDB:O64824 ProtClustDB:CLSN2912869
ArrayExpress:O64824 Genevestigator:O64824 Uniprot:O64824
Length = 227
Score = 133 (51.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 155 NLERTTASLIGRRIHGTPERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSM---DRG 211
N E +T++ + T ++ DF+C +C +L +PI T CGH FC CL++ +
Sbjct: 3 NGESSTSTSYSDSNNDTNDQGGDFECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHS 62
Query: 212 NKCPLCRAVL 221
+CP+C+AV+
Sbjct: 63 QECPVCKAVV 72
>UNIPROTKB|C9J3G7 [details] [associations]
symbol:PCGF3 "Polycomb group RING finger protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC139887 HOGENOM:HOG000231946
HGNC:HGNC:10066 ChiTaRS:PCGF3 EMBL:AC107464 IPI:IPI00878168
ProteinModelPortal:C9J3G7 SMR:C9J3G7 STRING:C9J3G7
Ensembl:ENST00000433814 ArrayExpress:C9J3G7 Bgee:C9J3G7
Uniprot:C9J3G7
Length = 109
Score = 117 (46.2 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 28/88 (31%), Positives = 45/88 (51%)
Query: 180 CTLCLKLLYEPIT-TPCGHSFCRSCLFQSMDRGNKCPLCRAVLFIT-P-RTCAVSVTLNS 236
C LC L + T T C H+FCRSCL + ++ N CP CR V+ + P + T+
Sbjct: 17 CRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTMQD 76
Query: 237 IIQKNFPE-EYAERKSEHDSLINFGVDL 263
I+ K P + AE + + + G+++
Sbjct: 77 IVYKLVPGLQEAEMRKQREFYHKLGMEV 104
>ZFIN|ZDB-GENE-070912-225 [details] [associations]
symbol:ftr03 "finTRIM family, member 3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-070912-225 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
eggNOG:KOG2177 EMBL:BX572635 OrthoDB:EOG4R23TJ
GeneTree:ENSGT00670000097622 HOVERGEN:HBG106862 IPI:IPI00868407
Ensembl:ENSDART00000143094 OMA:ACEESIQ Uniprot:B0S723
Length = 276
Score = 135 (52.6 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 28/71 (39%), Positives = 39/71 (54%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMD----RG-NKCPLCRAVLFITPRTCAV 230
D F+C++CL LL +P+ PCGHS+C SC+ D RG CP CR TPR
Sbjct: 12 DQFNCSICLDLLKDPVAIPCGHSYCMSCISDYWDQDEWRGVYSCPQCRQTF--TPRPALG 69
Query: 231 SVTLNSIIQKN 241
T+ + + +N
Sbjct: 70 KNTMLTEVVEN 80
>UNIPROTKB|Q889L2 [details] [associations]
symbol:PSPTO_0737 "ATP-dependent protease La domain
protein" species:223283 "Pseudomonas syringae pv. tomato str.
DC3000" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003111 Pfam:PF02190
GO:GO:0006508 EMBL:AE016853 GenomeReviews:AE016853_GR
InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0004176 eggNOG:COG2802
KO:K07157 OMA:RDCLREK HOGENOM:HOG000264786 ProtClustDB:CLSK868385
RefSeq:NP_790584.1 ProteinModelPortal:Q889L2 GeneID:1182357
KEGG:pst:PSPTO_0737 PATRIC:19992655
BioCyc:PSYR223283:GJIX-744-MONOMER Uniprot:Q889L2
Length = 196
Score = 129 (50.5 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 41/132 (31%), Positives = 65/132 (49%)
Query: 264 MPLFVMDVVI-PCQRFPLHIFEPRYRLMVRRIMEGNHRMGMVIIDPTT--GSVAD----F 316
+PLF ++ V+ P L +FE RY M+ R M+ G+V I + G V D
Sbjct: 3 LPLFPLNAVLFPGCVLDLQLFEARYLDMIGRCMKQGEGFGVVCITQGSEVGIVPDGYSRI 62
Query: 317 ACEVEITECEPLPDGRFVLEIESRRRFRILRSWDQ-DGYRVAEIEWVQDIHPEGV-EDRA 374
CE + + + +G + + RRFR++ + Q D VAE+EW+Q+ + E+ A
Sbjct: 63 GCEALVEDFQQQDNGLLGIRVVGGRRFRVIATEVQRDQLLVAEVEWLQEPEERPLQEEDA 122
Query: 375 DLQDLTNNAAEY 386
DL L AE+
Sbjct: 123 DLVALLEALAEH 134
>ZFIN|ZDB-GENE-090508-4 [details] [associations]
symbol:ftr59 "finTRIM family, member 59" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-090508-4 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00670000097622
EMBL:BX005466 IPI:IPI00487750 RefSeq:XP_686796.2
ProteinModelPortal:F8W341 Ensembl:ENSDART00000148970 GeneID:558486
KEGG:dre:558486 NextBio:20882494 Uniprot:F8W341
Length = 540
Score = 140 (54.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 29/71 (40%), Positives = 41/71 (57%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMD-----RGNKCPLCRAVLFITPRTC-A 229
D+F C +CL LL +P+T PCGHS+C+SC+ D R + CP CR +PR A
Sbjct: 9 DEFMCLVCLDLLKDPVTIPCGHSYCKSCITGCWDQDDEKRVHSCPQCRETF--SPRPALA 66
Query: 230 VSVTLNSIIQK 240
+ L I++K
Sbjct: 67 KNTILAEIVEK 77
>ZFIN|ZDB-GENE-070912-229 [details] [associations]
symbol:ftr07 "finTRIM family, member 7"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070912-229 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
EMBL:BX572635 GeneTree:ENSGT00670000097622 IPI:IPI00482574
RefSeq:XP_698750.3 UniGene:Dr.152968 Ensembl:ENSDART00000022008
GeneID:570209 KEGG:dre:570209 CTD:570209 NextBio:20890028
Uniprot:F1R523
Length = 541
Score = 140 (54.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNK-----CPLCRAVLFITPR-TCA 229
D F C++CL LL +P+T PCGHS+C SC+ D+ + CP CR TPR
Sbjct: 11 DQFSCSVCLDLLKDPVTIPCGHSYCMSCISDCWDQDEQNGVYSCPHCRQTF--TPRPVLG 68
Query: 230 VSVTLNSIIQK 240
+ L +++K
Sbjct: 69 KNTMLTEVVEK 79
>ZFIN|ZDB-GENE-050731-2 [details] [associations]
symbol:ftr24 "finTRIM family, member 24" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-050731-2 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HOVERGEN:HBG106862 EMBL:BC098890
IPI:IPI00627850 UniGene:Dr.160818 UniGene:Dr.70560
ProteinModelPortal:Q4FZZ8 InParanoid:Q4FZZ8 NextBio:20901453
Uniprot:Q4FZZ8
Length = 558
Score = 140 (54.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 28/71 (39%), Positives = 41/71 (57%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNK-----CPLCRAVLFITPRTCA- 229
D F+C++CL LL EP+T PCGHS+C +C+ ++ ++ CP CR TPR
Sbjct: 11 DQFNCSICLDLLREPVTIPCGHSYCMNCITDYWNQNDQRRVYSCPQCRETF--TPRPALN 68
Query: 230 VSVTLNSIIQK 240
+V I+QK
Sbjct: 69 KNVMFAEIVQK 79
>MGI|MGI:1890659 [details] [associations]
symbol:Trim39 "tripartite motif-containing 39" species:10090
"Mus musculus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
MGI:MGI:1890659 Pfam:PF00097 Prosite:PS00518 GO:GO:0005829
GO:GO:0005739 GO:GO:0006915 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOVERGEN:HBG001357 HOGENOM:HOG000234134 CTD:56658 eggNOG:NOG238084
KO:K12015 EMBL:AB046382 EMBL:AK053507 EMBL:BC031540 IPI:IPI00308801
IPI:IPI00480364 IPI:IPI00480438 RefSeq:NP_077788.2 UniGene:Mm.40624
ProteinModelPortal:Q9ESN2 SMR:Q9ESN2 STRING:Q9ESN2
PhosphoSite:Q9ESN2 PRIDE:Q9ESN2 GeneID:79263 KEGG:mmu:79263
UCSC:uc008ckv.1 InParanoid:Q9ESN2 OrthoDB:EOG480HWD NextBio:349899
CleanEx:MM_TRIM39 Genevestigator:Q9ESN2
GermOnline:ENSMUSG00000045409 Uniprot:Q9ESN2
Length = 488
Score = 139 (54.0 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 54/212 (25%), Positives = 98/212 (46%)
Query: 180 CTLCLKLLYEPITTPCGHSFCRSCL---FQSMDRGNKCPLCRAVLFITPRTCAVSVTLNS 236
C++CL+ L EP+ CGH+FC++C+ ++ ++R CP+CR R+ + L S
Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRY--RSLRPNRQLGS 86
Query: 237 IIQKNFPEEYAERKSEHDSLINFGVDLMPLFVM-DVVIPCQRFPL-HIFEPRYRL-MVRR 293
+++ + +RK +SL + + + LF D C + H P + M
Sbjct: 87 MVEIAKQLQTVKRKIRDESLCSQHHEPLSLFCYEDQEAVCLICAISHTHRPHTVVPMDDA 146
Query: 294 IMEGNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSWDQDG 353
E ++ ++P + + C E +P G +ESRR+ +IL+ +++
Sbjct: 147 TQEYKEKL-QKCLEPLEQKLQEITCCKASEEKKP---GELKRLVESRRQ-QILKEFEELH 201
Query: 354 YRVAEIEWVQDIHPEGVEDRAD-LQDLTNNAA 384
R+ E + Q + E+ D LQ L NAA
Sbjct: 202 RRLDEEQ--QTLLSRLEEEEQDILQRLRENAA 231
>UNIPROTKB|E1BTQ2 [details] [associations]
symbol:RNF8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016881 "acid-amino acid ligase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017335 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00400000022349
PANTHER:PTHR15067:SF3 OMA:VEMKEHR EMBL:AADN02011899 IPI:IPI00820679
Ensembl:ENSGALT00000035395 Uniprot:E1BTQ2
Length = 136
Score = 116 (45.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 26/94 (27%), Positives = 46/94 (48%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLFITPRTCAVSVTLN 235
++ CT+C + E +T C HSFC C+ + R +CP+CR + R+ + ++
Sbjct: 7 NELQCTICSEHFIEAVTLNCAHSFCSYCIDEWTKRKVECPICRQEIKSKTRSLVLDNCID 66
Query: 236 SIIQKNFPE--EYA-----ERKSEHDSLINFGVD 262
+++ E E+ ERK + D L+N D
Sbjct: 67 RMVENLDVEMKEHRLTLIRERKEKRDMLVNPAAD 100
>UNIPROTKB|A2AAZ4 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL662832 EMBL:AL662795 EMBL:AL773535
EMBL:BX294158 EMBL:CR759928 EMBL:BX927214 EMBL:CR759281
EMBL:BX248580 HGNC:HGNC:10065 IPI:IPI00790609 SMR:A2AAZ4
Ensembl:ENST00000412150 Ensembl:ENST00000418057
Ensembl:ENST00000426676 Ensembl:ENST00000438089
Ensembl:ENST00000440271 Ensembl:ENST00000447542
Ensembl:ENST00000450818 Uniprot:A2AAZ4
Length = 74
Score = 116 (45.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 17/42 (40%), Positives = 30/42 (71%)
Query: 180 CTLCLKLLYEPITTPCGHSFCRSCL---FQSMDRGNKCPLCR 218
C++CL+ L EP+ CGH+FC++C+ ++ ++R CP+CR
Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCR 70
>UNIPROTKB|I3LUY7 [details] [associations]
symbol:I3LUY7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051301 "cell division" evidence=IEA] [GO:0016881
"acid-amino acid ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017335 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00400000022349 PANTHER:PTHR15067:SF3 EMBL:CU855572
Ensembl:ENSSSCT00000029099 OMA:VEMKEHR Uniprot:I3LUY7
Length = 135
Score = 116 (45.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 21/75 (28%), Positives = 37/75 (49%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLFITPRTCAVSVTLN 235
++ C +C + E +T C HSFC C+ + M R +CP+CR + + + +N
Sbjct: 49 NELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKVECPICRKDIKSKTHSLVLDNCIN 108
Query: 236 SIIQKNFPEEYAERK 250
++ N E ER+
Sbjct: 109 KMVD-NLSSEVKERR 122
>MGI|MGI:102749 [details] [associations]
symbol:Trim25 "tripartite motif-containing 25" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IEA] InterPro:IPR001841
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:102749 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0030054 GO:GO:0008270
GO:GO:0045087 GO:GO:0051607 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 EMBL:AL646096 CTD:7706
eggNOG:NOG253760 HOVERGEN:HBG101063 KO:K10652 OMA:SHINGAT
OrthoDB:EOG42JNRQ EMBL:D63902 EMBL:AK169562 IPI:IPI00122289
PIR:I49642 RefSeq:NP_033572.2 UniGene:Mm.248445
ProteinModelPortal:Q61510 SMR:Q61510 MINT:MINT-240797 STRING:Q61510
PhosphoSite:Q61510 PaxDb:Q61510 PRIDE:Q61510
Ensembl:ENSMUST00000107896 GeneID:217069 KEGG:mmu:217069
GeneTree:ENSGT00700000104271 HOGENOM:HOG000132974 InParanoid:Q5SU70
NextBio:375545 Bgee:Q61510 CleanEx:MM_TRIM25 Genevestigator:Q61510
GermOnline:ENSMUSG00000000275 Uniprot:Q61510
Length = 634
Score = 140 (54.3 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQS-MDRGN--KCPLCRAVLFITPR 226
++ C++CL+L EP+TTPCGH+FC SCL ++ + +G +CP CR V + P+
Sbjct: 9 EELSCSVCLELFKEPVTTPCGHNFCMSCLDETWVVQGPPYRCPQCRKVYQVRPQ 62
>RGD|1585168 [details] [associations]
symbol:Rnf168 "ring finger protein 168, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0000151 "ubiquitin
ligase complex" evidence=ISO;ISS] [GO:0003682 "chromatin binding"
evidence=ISO;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;ISS]
[GO:0006302 "double-strand break repair" evidence=ISO;ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISO;ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISO;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=ISO;ISS]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISS] [GO:0031491
"nucleosome binding" evidence=IEA;ISO] [GO:0035518 "histone H2A
monoubiquitination" evidence=ISO;ISS] [GO:0035861 "site of
double-strand break" evidence=ISO;ISS] [GO:0036351 "histone H2A-K13
ubiquitination" evidence=ISO;ISS] [GO:0036352 "histone H2A-K15
ubiquitination" evidence=ISO;ISS] [GO:0042393 "histone binding"
evidence=ISO;ISS] [GO:0043130 "ubiquitin binding" evidence=ISO;ISS]
[GO:0045190 "isotype switching" evidence=ISO;ISS] [GO:0045739
"positive regulation of DNA repair" evidence=ISO;ISS] [GO:0045900
"negative regulation of translational elongation" evidence=ISO;ISS]
[GO:0070530 "K63-linked polyubiquitin binding" evidence=ISO;ISS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO;ISS]
[GO:0070535 "histone H2A K63-linked ubiquitination"
evidence=ISO;ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 RGD:1585168 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 GO:GO:0010212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006302 GO:GO:0006511
GO:GO:0045190 GO:GO:0004842 GO:GO:0042393 GO:GO:0045739
GO:GO:0000151 GO:GO:0035518 GO:GO:0045900 GO:GO:0035861
GO:GO:0070530 CTD:165918 HOGENOM:HOG000154156 HOVERGEN:HBG067220
OrthoDB:EOG4THVT2 GO:GO:0070535 GO:GO:0036351 GO:GO:0036352
eggNOG:NOG292819 EMBL:BC166869 IPI:IPI00764042
RefSeq:NP_001121069.2 UniGene:Rn.101441 ProteinModelPortal:B2RYR0
STRING:B2RYR0 PRIDE:B2RYR0 GeneID:690043 KEGG:rno:690043
UCSC:RGD:1585168 NextBio:740065 ArrayExpress:B2RYR0
Genevestigator:B2RYR0 Uniprot:B2RYR0
Length = 564
Score = 136 (52.9 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 180 CTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKC-PLCRAVL-----FITPRTCAVSVT 233
C +C+++L EP+T PC H+ C C ++++ N C P CR + + T R V+
Sbjct: 16 CGICMEILVEPVTLPCNHTLCNPCFQSTVEKANLCCPFCRRRVSSWTRYHTRRNSLVNTD 75
Query: 234 LNSIIQKNFPEEYAERKSEHDS 255
L IIQK++ +E R S +S
Sbjct: 76 LWEIIQKHYAKECKLRISGQES 97
Score = 47 (21.6 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 360 EWVQDIHPEGVEDRADLQDLTNNAAEYARLWL--RREKESARQDRRRLE 406
E+ ++I E +A ++ + EY + L E+E R +RRR E
Sbjct: 119 EYEEEISKVEAERQASKEEENKASEEYIQRLLAEEEEEEKRRTERRRSE 167
>MGI|MGI:1917488 [details] [associations]
symbol:Rnf168 "ring finger protein 168" species:10090 "Mus
musculus" [GO:0000151 "ubiquitin ligase complex" evidence=ISO]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010212 "response
to ionizing radiation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=ISO] [GO:0035518 "histone
H2A monoubiquitination" evidence=ISO] [GO:0035861 "site of
double-strand break" evidence=ISO] [GO:0036351 "histone H2A-K13
ubiquitination" evidence=ISO] [GO:0036352 "histone H2A-K15
ubiquitination" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043130 "ubiquitin binding" evidence=ISO]
[GO:0045190 "isotype switching" evidence=IMP] [GO:0045739 "positive
regulation of DNA repair" evidence=ISO] [GO:0045900 "negative
regulation of translational elongation" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0070530 "K63-linked
polyubiquitin binding" evidence=ISO] [GO:0070534 "protein
K63-linked ubiquitination" evidence=ISO] [GO:0070535 "histone H2A
K63-linked ubiquitination" evidence=ISO] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1917488
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006302 GO:GO:0006511 GO:GO:0045190 GO:GO:0004842
GO:GO:0042393 GO:GO:0045739 GO:GO:0000151 GO:GO:0035518
GO:GO:0045900 GO:GO:0035861 GO:GO:0070530 CTD:165918
HOGENOM:HOG000154156 HOVERGEN:HBG067220 OrthoDB:EOG4THVT2
GO:GO:0070535 GO:GO:0036351 GO:GO:0036352 eggNOG:NOG292819
EMBL:AC126265 EMBL:BC046815 IPI:IPI00330736 RefSeq:NP_081631.2
UniGene:Mm.228263 ProteinModelPortal:Q80XJ2 SMR:Q80XJ2
STRING:Q80XJ2 PhosphoSite:Q80XJ2 PRIDE:Q80XJ2
Ensembl:ENSMUST00000014218 GeneID:70238 KEGG:mmu:70238
UCSC:uc007yyo.2 GeneTree:ENSGT00620000087973 InParanoid:Q80XJ2
NextBio:331230 Bgee:Q80XJ2 CleanEx:MM_RNF168 Genevestigator:Q80XJ2
GermOnline:ENSMUSG00000014074 Uniprot:Q80XJ2
Length = 565
Score = 136 (52.9 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 180 CTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKC-PLCRAVL-----FITPRTCAVSVT 233
C +C+++L EP+T PC H+ C C ++++ N C P CR + + T R V+
Sbjct: 16 CGICMEILLEPVTLPCNHTLCNPCFQSTVEKANLCCPFCRRRVSSWTRYHTRRNSLVNTD 75
Query: 234 LNSIIQKNFPEEYAERKSEHDS 255
L IIQK++ +E R S +S
Sbjct: 76 LWEIIQKHYAKECKLRISGQES 97
Score = 47 (21.6 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 360 EWVQDIHPEGVEDRADLQDLTNNAAEYA-RLWLRREKESARQ-DRRRLE 406
E+ ++I E +A ++ + EY RL E+E RQ ++RR E
Sbjct: 119 EYEEEISRVEAERQASKEEENKASEEYIQRLLAEEEEEEKRQREKRRSE 167
Score = 43 (20.2 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 17/73 (23%), Positives = 33/73 (45%)
Query: 368 EGVEDRADLQ-DLTNNAAEYARLWLRREKESARQDRR---RLEKLLNVEVMMPPSQ--DP 421
E D+ + + + T + + R K+ QDR +L+K ++ E M+P Q P
Sbjct: 412 ESSSDQEETEVNFTQKLIDLEHMLFERHKQE-EQDRLLALQLQKEVDKEQMVPNRQKGSP 470
Query: 422 ERFSFWLATLSDR 434
+++ + DR
Sbjct: 471 DQYQLRTPSPPDR 483
>ZFIN|ZDB-GENE-060421-3419 [details] [associations]
symbol:btr20 "bloodthirsty-related gene family,
member 20" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-060421-3419 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234136 HOVERGEN:HBG106862 UniGene:Dr.23709
EMBL:BC065891 IPI:IPI00758608 ProteinModelPortal:Q6P000
InParanoid:Q6P000 Uniprot:Q6P000
Length = 564
Score = 139 (54.0 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 25/80 (31%), Positives = 47/80 (58%)
Query: 175 TDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGN--KCPLCRAVLFITPRTCAVSV 232
+++ C++CL++ +P++TPCGH+FC+SCL + + CP C+ P ++
Sbjct: 53 SEELRCSICLEVFTDPVSTPCGHNFCKSCLNKYWNNSQTCSCPNCKETFTQRP-DLKINT 111
Query: 233 TLNSIIQKNFPEEYAERKSE 252
TL I +++ E+ E K+E
Sbjct: 112 TLREI-SEHYKEKRPEEKAE 130
>UNIPROTKB|E9PJJ9 [details] [associations]
symbol:TRIM68 "E3 ubiquitin-protein ligase TRIM68"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC090719 HGNC:HGNC:21161
ChiTaRS:TRIM68 IPI:IPI00977425 ProteinModelPortal:E9PJJ9 SMR:E9PJJ9
Ensembl:ENST00000531101 ArrayExpress:E9PJJ9 Bgee:E9PJJ9
Uniprot:E9PJJ9
Length = 187
Score = 126 (49.4 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 26/72 (36%), Positives = 40/72 (55%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLF-------QSMDRGNKCPLCRAVLFITPRTC 228
++ C +C+ L EP++ CGHSFC SCL +S + G CPLCRA + PR
Sbjct: 12 EEVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCRAP--VQPRNL 69
Query: 229 AVSVTLNSIIQK 240
+ L ++++K
Sbjct: 70 RPNWQLANVVEK 81
>UNIPROTKB|Q8NHY2 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006977 "DNA damage response, signal
transduction by p53 class mediator resulting in cell cycle arrest"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0005925 "focal adhesion"
evidence=IDA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005829 GO:GO:0005813
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0006977
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0016874 GO:GO:0016607
GO:GO:0008270 eggNOG:COG2319 EMBL:CH471067 GO:GO:0005925
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 OMA:PICFEMI
EMBL:AF508940 EMBL:BK000438 EMBL:AF527539 EMBL:AY509921
EMBL:AK025789 EMBL:AK314750 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 EMBL:BC094728 IPI:IPI00171771
IPI:IPI00184865 IPI:IPI00431955 RefSeq:NP_001001740.1
RefSeq:NP_071902.2 UniGene:Hs.523744 ProteinModelPortal:Q8NHY2
SMR:Q8NHY2 IntAct:Q8NHY2 MINT:MINT-260162 STRING:Q8NHY2
PhosphoSite:Q8NHY2 DMDM:55976539 PaxDb:Q8NHY2 PRIDE:Q8NHY2
DNASU:64326 Ensembl:ENST00000308769 Ensembl:ENST00000367669
GeneID:64326 KEGG:hsa:64326 UCSC:uc001gku.1 UCSC:uc001gkv.1
UCSC:uc009wwv.2 CTD:64326 GeneCards:GC01M175913 HGNC:HGNC:17440
HPA:HPA028197 MIM:608067 neXtProt:NX_Q8NHY2 PharmGKB:PA134952161
HOVERGEN:HBG054995 InParanoid:Q8NHY2 OrthoDB:EOG4M0F18
ChiTaRS:RFWD2 GenomeRNAi:64326 NextBio:66247 ArrayExpress:Q8NHY2
Bgee:Q8NHY2 CleanEx:HS_RFWD2 Genevestigator:Q8NHY2
GermOnline:ENSG00000143207 Uniprot:Q8NHY2
Length = 731
Score = 140 (54.3 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 161 ASLIGRRIHGTPERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAV 220
A L I+ ++++DF C +C ++ E T CGHSFC C+ QS++ N+CP C V
Sbjct: 117 APLCNGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYV 176
Query: 221 L 221
+
Sbjct: 177 V 177
>UNIPROTKB|F1MHX1 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005925 "focal adhesion" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 OMA:PICFEMI
GeneTree:ENSGT00700000104377 EMBL:DAAA02043390 EMBL:DAAA02043391
EMBL:DAAA02043392 IPI:IPI00841834 UniGene:Bt.7449
Ensembl:ENSBTAT00000044452 ArrayExpress:F1MHX1 Uniprot:F1MHX1
Length = 735
Score = 140 (54.3 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 161 ASLIGRRIHGTPERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAV 220
A L I+ ++++DF C +C ++ E T CGHSFC C+ QS++ N+CP C V
Sbjct: 121 APLCNGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYV 180
Query: 221 L 221
+
Sbjct: 181 V 181
>UNIPROTKB|Q9Y4K3 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA] [GO:0001843
"neural tube closure" evidence=IEA] [GO:0006461 "protein complex
assembly" evidence=IEA] [GO:0019886 "antigen processing and
presentation of exogenous peptide antigen via MHC class II"
evidence=IEA] [GO:0030316 "osteoclast differentiation"
evidence=IEA] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA]
[GO:0042088 "T-helper 1 type immune response" evidence=IEA]
[GO:0042102 "positive regulation of T cell proliferation"
evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IEA] [GO:0043011 "myeloid dendritic cell
differentiation" evidence=IEA] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IEA] [GO:0045410
"positive regulation of interleukin-6 biosynthetic process"
evidence=IEA] [GO:0045453 "bone resorption" evidence=IEA]
[GO:0048468 "cell development" evidence=IEA] [GO:0048661 "positive
regulation of smooth muscle cell proliferation" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
[GO:0070498 "interleukin-1-mediated signaling pathway"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0051865 "protein
autoubiquitination" evidence=IDA;TAS] [GO:0032743 "positive
regulation of interleukin-2 production" evidence=IMP] [GO:0002726
"positive regulation of T cell cytokine production" evidence=IMP]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IMP] [GO:0050870 "positive regulation of T cell
activation" evidence=IC] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=EXP;IDA;TAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0050852 "T cell receptor
signaling pathway" evidence=IMP;TAS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IMP;IDA;TAS] [GO:0019901 "protein kinase binding"
evidence=IPI] [GO:0043422 "protein kinase B binding" evidence=IPI]
[GO:0070534 "protein K63-linked ubiquitination" evidence=IGI;IDA]
[GO:0043507 "positive regulation of JUN kinase activity"
evidence=IDA;NAS] [GO:0070555 "response to interleukin-1"
evidence=IDA] [GO:0032147 "activation of protein kinase activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA;TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=IDA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IDA;TAS] [GO:0042826 "histone
deacetylase binding" evidence=IPI] [GO:0031435 "mitogen-activated
protein kinase kinase kinase binding" evidence=IPI] [GO:0047485
"protein N-terminus binding" evidence=IPI] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IPI] [GO:0031996 "thioesterase
binding" evidence=IPI] [GO:0005811 "lipid particle" evidence=ISS]
[GO:0000187 "activation of MAPK activity" evidence=TAS] [GO:0002224
"toll-like receptor signaling pathway" evidence=TAS] [GO:0002755
"MyD88-dependent toll-like receptor signaling pathway"
evidence=TAS] [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=TAS]
[GO:0007254 "JNK cascade" evidence=TAS] [GO:0008063 "Toll signaling
pathway" evidence=TAS] [GO:0010008 "endosome membrane"
evidence=TAS] [GO:0031293 "membrane protein intracellular domain
proteolysis" evidence=TAS] [GO:0034130 "toll-like receptor 1
signaling pathway" evidence=TAS] [GO:0034134 "toll-like receptor 2
signaling pathway" evidence=TAS] [GO:0034138 "toll-like receptor 3
signaling pathway" evidence=TAS] [GO:0034142 "toll-like receptor 4
signaling pathway" evidence=TAS] [GO:0035666 "TRIF-dependent
toll-like receptor signaling pathway" evidence=TAS] [GO:0035872
"nucleotide-binding domain, leucine rich repeat containing receptor
signaling pathway" evidence=TAS] [GO:0045087 "innate immune
response" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0051403 "stress-activated MAPK
cascade" evidence=TAS] [GO:0070423 "nucleotide-binding
oligomerization domain containing signaling pathway" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;NAS] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0009898 "internal side of plasma
membrane" evidence=ISS] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=NAS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:2000679 "positive regulation of
transcription regulatory region DNA binding" evidence=IDA]
[GO:0035631 "CD40 receptor complex" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] Reactome:REACT_6782 InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027139 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005829 GO:GO:0005938 GO:GO:0048471 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0048011
Pathway_Interaction_DB:p75ntrpathway
Pathway_Interaction_DB:cd8tcrpathway EMBL:CH471064 GO:GO:0042981
Pathway_Interaction_DB:tcrpathway GO:GO:0019886 GO:GO:0050852
GO:GO:0042088 Pathway_Interaction_DB:bcr_5pathway GO:GO:0007254
GO:GO:0005811 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0031965 GO:GO:0048661 GO:GO:0045944 GO:GO:0045087
GO:GO:0000187 GO:GO:0010008 GO:GO:0000122 GO:GO:0031293
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102
GO:GO:0001843 GO:GO:0042475 GO:GO:0045453 GO:GO:0031398
GO:GO:0070555 GO:GO:0004842 GO:GO:0001503 GO:GO:0007250
GO:GO:0009898 InterPro:IPR017907 GO:GO:0070534 GO:GO:0048468
GO:GO:0051865 GO:GO:0002755 GO:GO:0008063 GO:GO:0034130
GO:GO:0034134 GO:GO:0034138 GO:GO:0034142 GO:GO:0035666
Pathway_Interaction_DB:nfkappabcanonicalpathway
Pathway_Interaction_DB:p38_mkk3_6pathway GO:GO:0007249
SUPFAM:SSF49599 GO:GO:0043011 GO:GO:0050870 GO:GO:0035631
Pathway_Interaction_DB:p38alphabetapathway GO:GO:0045672
GO:GO:0030316 GO:GO:0070423 Pathway_Interaction_DB:il1pathway
GO:GO:0032743 GO:GO:0051023 GO:GO:0043507 GO:GO:0070498
GO:GO:0045410 GO:GO:2000679 GO:GO:0045084 GO:GO:0031666
GO:GO:0002726 EMBL:AC009656 PDB:1LB6 PDBsum:1LB6 CTD:7189
eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
OMA:SEAPIRQ OrthoDB:EOG4320XV PANTHER:PTHR10131:SF48 EMBL:U78798
EMBL:AY228337 EMBL:AK292978 EMBL:AC061999 EMBL:BC031052
IPI:IPI00743663 PIR:S71821 RefSeq:NP_004611.1 RefSeq:NP_665802.1
UniGene:Hs.444172 UniGene:Hs.591983 PDB:1LB4 PDB:1LB5 PDB:2ECI
PDB:2JMD PDB:3HCS PDB:3HCT PDB:3HCU PDBsum:1LB4 PDBsum:1LB5
PDBsum:2ECI PDBsum:2JMD PDBsum:3HCS PDBsum:3HCT PDBsum:3HCU
ProteinModelPortal:Q9Y4K3 SMR:Q9Y4K3 DIP:DIP-27515N IntAct:Q9Y4K3
MINT:MINT-88585 STRING:Q9Y4K3 PhosphoSite:Q9Y4K3 DMDM:30580642
PaxDb:Q9Y4K3 PRIDE:Q9Y4K3 DNASU:7189 Ensembl:ENST00000348124
Ensembl:ENST00000526995 GeneID:7189 KEGG:hsa:7189 UCSC:uc001mwq.2
GeneCards:GC11M036467 HGNC:HGNC:12036 HPA:CAB004605 HPA:HPA019805
HPA:HPA020599 MIM:602355 neXtProt:NX_Q9Y4K3 PharmGKB:PA36713
InParanoid:Q9Y4K3 PhylomeDB:Q9Y4K3 ChiTaRS:Traf6
EvolutionaryTrace:Q9Y4K3 GenomeRNAi:7189 NextBio:28192 Bgee:Q9Y4K3
CleanEx:HS_TRAF6 Genevestigator:Q9Y4K3 GermOnline:ENSG00000175104
Uniprot:Q9Y4K3
Length = 522
Score = 138 (53.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 27/73 (36%), Positives = 41/73 (56%)
Query: 151 ASLQNLERTTASLI-GRRIHGTPERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSM- 208
AS NL + I G + P ++C +CL L E + TPCGH FC++C+ +S+
Sbjct: 40 ASTGNLSSSFMEEIQGYDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIR 99
Query: 209 DRGNKCPLCRAVL 221
D G+KCP+ +L
Sbjct: 100 DAGHKCPVDNEIL 112
>UNIPROTKB|B6CJY4 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9531 "Cercocebus atys" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0005811 "lipid particle"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005938 GO:GO:0005634
GO:GO:0007165 GO:GO:0042981 GO:GO:0005811 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 SUPFAM:SSF49599 HOVERGEN:HBG060248
PANTHER:PTHR10131:SF48 EMBL:EU204928 ProteinModelPortal:B6CJY4
Uniprot:B6CJY4
Length = 522
Score = 138 (53.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 27/73 (36%), Positives = 41/73 (56%)
Query: 151 ASLQNLERTTASLI-GRRIHGTPERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSM- 208
AS NL + I G + P ++C +CL L E + TPCGH FC++C+ +S+
Sbjct: 40 ASTGNLSSSFMEEIQGYDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIR 99
Query: 209 DRGNKCPLCRAVL 221
D G+KCP+ +L
Sbjct: 100 DAGHKCPVDNEIL 112
>MGI|MGI:108072 [details] [associations]
symbol:Traf6 "TNF receptor-associated factor 6" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0001503 "ossification"
evidence=IMP] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0002726 "positive regulation of T cell cytokine production"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IDA] [GO:0004871 "signal transducer activity"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006461 "protein complex assembly" evidence=ISO]
[GO:0006955 "immune response" evidence=IMP] [GO:0007165 "signal
transduction" evidence=IDA;TAS] [GO:0007249 "I-kappaB
kinase/NF-kappaB cascade" evidence=IMP] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=ISO] [GO:0007254 "JNK
cascade" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0009898
"internal side of plasma membrane" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IGI] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=ISO] [GO:0019886 "antigen processing and
presentation of exogenous peptide antigen via MHC class II"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=ISO]
[GO:0030316 "osteoclast differentiation" evidence=IMP] [GO:0031435
"mitogen-activated protein kinase kinase kinase binding"
evidence=ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IMP]
[GO:0031996 "thioesterase binding" evidence=ISO] [GO:0032147
"activation of protein kinase activity" evidence=ISO] [GO:0032743
"positive regulation of interleukin-2 production" evidence=ISO]
[GO:0035631 "CD40 receptor complex" evidence=IDA] [GO:0042088
"T-helper 1 type immune response" evidence=IMP] [GO:0042102
"positive regulation of T cell proliferation" evidence=IMP]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IMP] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043011 "myeloid dendritic cell differentiation"
evidence=IMP] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISO;IMP] [GO:0043234 "protein
complex" evidence=ISO] [GO:0043422 "protein kinase B binding"
evidence=ISO] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=ISO] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IMP] [GO:0045410
"positive regulation of interleukin-6 biosynthetic process"
evidence=IMP] [GO:0045453 "bone resorption" evidence=IMP]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046849 "bone remodeling" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=ISO] [GO:0048468 "cell development" evidence=IMP]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048661 "positive regulation of smooth muscle cell
proliferation" evidence=ISO] [GO:0050852 "T cell receptor signaling
pathway" evidence=ISO] [GO:0051023 "regulation of immunoglobulin
secretion" evidence=IDA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=ISO] [GO:0051865 "protein
autoubiquitination" evidence=ISO;TAS] [GO:0070498
"interleukin-1-mediated signaling pathway" evidence=ISO;IMP]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO;IDA]
[GO:0070555 "response to interleukin-1" evidence=ISO] [GO:2000679
"positive regulation of transcription regulatory region DNA
binding" evidence=ISO] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:108072 Prosite:PS00518 GO:GO:0005829
GO:GO:0005938 GO:GO:0048471 GO:GO:0042981 GO:GO:0019886
GO:GO:0050852 GO:GO:0042088 GO:GO:0007254 GO:GO:0005811
GO:GO:0046872 GO:GO:0043123 GO:GO:0008270 GO:GO:0031965
GO:GO:0048661 GO:GO:0045944 Reactome:REACT_115202 EMBL:CH466519
GO:GO:0000122 GO:GO:0004871 Reactome:REACT_107772 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102 GO:GO:0001843
GO:GO:0042475 GO:GO:0045453 GO:GO:0004842 GO:GO:0001503
GO:GO:0007250 GO:GO:0009898 InterPro:IPR017907 GO:GO:0070534
GO:GO:0048468 GO:GO:0051865 GO:GO:0007249 SUPFAM:SSF49599
GO:GO:0043011 GO:GO:0035631 GO:GO:0045672 GO:GO:0030316
GO:GO:0032743 GO:GO:0051023 GO:GO:0043507 GO:GO:0070498
GO:GO:0045410 GO:GO:2000679 GO:GO:0045084 GO:GO:0031666
GO:GO:0002726 EMBL:AL929571 GeneTree:ENSGT00550000074359 CTD:7189
eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
OMA:SEAPIRQ OrthoDB:EOG4320XV PANTHER:PTHR10131:SF48 EMBL:D84655
EMBL:AK041172 EMBL:AK155434 EMBL:BC060705 IPI:IPI00136488
IPI:IPI00222919 RefSeq:NP_033450.2 UniGene:Mm.292729 HSSP:Q9Y4K3
ProteinModelPortal:P70196 SMR:P70196 DIP:DIP-29812N IntAct:P70196
MINT:MINT-252449 STRING:P70196 PhosphoSite:P70196 PRIDE:P70196
Ensembl:ENSMUST00000004949 GeneID:22034 KEGG:mmu:22034
UCSC:uc008lhl.1 UCSC:uc008lhm.1 InParanoid:Q6P9M0 NextBio:301798
Bgee:P70196 CleanEx:MM_TRAF6 Genevestigator:P70196
GermOnline:ENSMUSG00000027164 Uniprot:P70196
Length = 530
Score = 138 (53.6 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 27/73 (36%), Positives = 41/73 (56%)
Query: 151 ASLQNLERTTASLI-GRRIHGTPERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSM- 208
AS NL + I G + P ++C +CL L E + TPCGH FC++C+ +S+
Sbjct: 40 ASTGNLSSSFMEEIQGYDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIR 99
Query: 209 DRGNKCPLCRAVL 221
D G+KCP+ +L
Sbjct: 100 DAGHKCPVDNEIL 112
>UNIPROTKB|A7XUJ6 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9823 "Sus scrofa" [GO:0005811 "lipid particle"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0070498 "interleukin-1-mediated
signaling pathway" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] [GO:0050852 "T cell receptor
signaling pathway" evidence=IEA] [GO:0048468 "cell development"
evidence=IEA] [GO:0046849 "bone remodeling" evidence=IEA]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=IEA] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0031666
"positive regulation of lipopolysaccharide-mediated signaling
pathway" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005938 GO:GO:0005634 GO:GO:0007165
GO:GO:0042981 GO:GO:0005811 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 SUPFAM:SSF49599
GeneTree:ENSGT00550000074359 CTD:7189 eggNOG:NOG289765
HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175 OMA:SEAPIRQ
OrthoDB:EOG4320XV PANTHER:PTHR10131:SF48 EMBL:EU095967
RefSeq:NP_001098756.1 UniGene:Ssc.96412 ProteinModelPortal:A7XUJ6
SMR:A7XUJ6 STRING:A7XUJ6 Ensembl:ENSSSCT00000014516
Ensembl:ENSSSCT00000033074 GeneID:396629 KEGG:ssc:396629
Uniprot:A7XUJ6
Length = 541
Score = 138 (53.6 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 27/73 (36%), Positives = 41/73 (56%)
Query: 151 ASLQNLERTTASLI-GRRIHGTPERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSM- 208
AS NL + I G + P ++C +CL L E + TPCGH FC++C+ +S+
Sbjct: 41 ASTGNLSSSFMEEIQGYDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIR 100
Query: 209 DRGNKCPLCRAVL 221
D G+KCP+ +L
Sbjct: 101 DAGHKCPVDNEIL 113
>ZFIN|ZDB-GENE-070705-379 [details] [associations]
symbol:btr27 "bloodthirsty-related gene family,
member 27" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070705-379 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
eggNOG:NOG252602 OrthoDB:EOG4BVRTF HOVERGEN:HBG106862 EMBL:CR853286
IPI:IPI00962937 Ensembl:ENSDART00000132370
GeneTree:ENSGT00660000095328 Uniprot:A5WUZ3
Length = 549
Score = 143 (55.4 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 25/80 (31%), Positives = 47/80 (58%)
Query: 175 TDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGN--KCPLCRAVLFITPRTCAVSV 232
+++ C++CL++ +P++TPCGH+FC+SCL + + CP C+ P ++
Sbjct: 34 SEELQCSICLEVFTDPVSTPCGHNFCKSCLNKCWNNSQTCSCPYCKETFRHRP-DLKINT 92
Query: 233 TLNSIIQKNFPEEYAERKSE 252
TL I +++ E+ E K+E
Sbjct: 93 TLREI-SEHYKEKKPEEKAE 111
Score = 38 (18.4 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 8/37 (21%), Positives = 16/37 (43%)
Query: 360 EWVQDIHPEGVEDRADLQDLTNNAAEYARLWLRREKE 396
+W + E + + + N + +WLR+E E
Sbjct: 441 DWDLGVARESINRKGKITLTPGNG--FCTVWLRKENE 475
>ZFIN|ZDB-GENE-070912-126 [details] [associations]
symbol:ftr16 "finTRIM family, member 16"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070912-126 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00670000097622 EMBL:CR457482 IPI:IPI00633084
RefSeq:XP_690796.5 Ensembl:ENSDART00000056164 GeneID:562315
Uniprot:F1Q5D7
Length = 558
Score = 138 (53.6 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 28/71 (39%), Positives = 40/71 (56%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNK-----CPLCRAVLFITPRTCAV 230
D+F C++CL LL +P+T PCGHS+C SC+ D+ + CP CR TPR
Sbjct: 11 DEFSCSVCLDLLKDPVTIPCGHSYCMSCISGCWDQDEQKRVYSCPQCRQTF--TPRPALG 68
Query: 231 SVT-LNSIIQK 240
T L +++K
Sbjct: 69 KNTILAEVLEK 79
>TAIR|locus:2087278 [details] [associations]
symbol:PRT1 "proteolysis 1" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=TAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=TAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=TAS] InterPro:IPR001841 InterPro:IPR000433
Pfam:PF00569 PROSITE:PS01357 PROSITE:PS50089 PROSITE:PS50135
SMART:SM00184 SMART:SM00291 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005737 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 eggNOG:NOG251630
EMBL:AB028609 EMBL:AJ224306 EMBL:AJ224307 EMBL:AY080799
EMBL:AY114077 EMBL:AY087139 IPI:IPI00532279 PIR:T52193
RefSeq:NP_189124.1 UniGene:At.77 ProteinModelPortal:Q8LBL5
SMR:Q8LBL5 STRING:Q8LBL5 PRIDE:Q8LBL5 EnsemblPlants:AT3G24800.1
GeneID:822078 KEGG:ath:AT3G24800 GeneFarm:4910 TAIR:At3g24800
HOGENOM:HOG000030197 InParanoid:Q8LBL5 OMA:VCLELLY PhylomeDB:Q8LBL5
ProtClustDB:CLSN2915347 Genevestigator:Q8LBL5 GermOnline:AT3G24800
Uniprot:Q8LBL5
Length = 410
Score = 136 (52.9 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 173 ERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMD--RGNKCPLCRAVLFITPRTCAV 230
E D F C +CL+LLY+PI CGH C C+ +SM+ R + CP+CR P C
Sbjct: 19 EIPDQFLCCVCLELLYKPIVLSCGHLSCFWCVHKSMNGFRESHCPICRDPYVHFPSVCQ- 77
Query: 231 SVTLNSIIQKNFPEEYAERKSE 252
L +++K +P + +R+ +
Sbjct: 78 --KLYFLLKKMYPLAHKKREEQ 97
Score = 133 (51.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 26/78 (33%), Positives = 39/78 (50%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLFITPRTCA-VSVTL 234
DD C+ C +LL P+ CGH +C C+ + K C+ PR V + L
Sbjct: 188 DDLLCSACKELLVRPVVLNCGHVYCEGCVVDMAEESEKIK-CQECNVCDPRGFPKVCLIL 246
Query: 235 NSIIQKNFPEEYAERKSE 252
++++NFPEEY R S+
Sbjct: 247 EQLLEENFPEEYNSRSSK 264
>UNIPROTKB|B6CJY5 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9544 "Macaca mulatta" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005811 "lipid particle" evidence=ISS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005886 GO:GO:0005938 GO:GO:0048471
GO:GO:0042981 GO:GO:0050852 GO:GO:0005811 GO:GO:0046872
GO:GO:0043123 GO:GO:0008270 GO:GO:0031965 GO:GO:0045944
GO:GO:0000122 GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0070555 GO:GO:0004842 GO:GO:0007250 InterPro:IPR017907
GO:GO:0070534 SUPFAM:SSF49599 GO:GO:0045672 GO:GO:0032743
GO:GO:0043507 GO:GO:2000679 GO:GO:0002726 CTD:7189 eggNOG:NOG289765
HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
PANTHER:PTHR10131:SF48 EMBL:EU204929 RefSeq:NP_001129268.1
UniGene:Mmu.17706 STRING:B6CJY5 GeneID:716907 KEGG:mcc:716907
NextBio:19981456 Uniprot:B6CJY5
Length = 522
Score = 137 (53.3 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 27/73 (36%), Positives = 41/73 (56%)
Query: 151 ASLQNLERTTASLI-GRRIHGTPERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSM- 208
AS NL + I G + P ++C +CL L E + TPCGH FC++C+ +S+
Sbjct: 40 ASTGNLSSSFMEDIQGYDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIR 99
Query: 209 DRGNKCPLCRAVL 221
D G+KCP+ +L
Sbjct: 100 DAGHKCPVDNEIL 112
>ZFIN|ZDB-GENE-070705-491 [details] [associations]
symbol:ftr01 "finTRIM family, member 1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070705-491 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00670000097622 EMBL:BX890600 IPI:IPI00495963
Ensembl:ENSDART00000100524 Uniprot:E7F5J0
Length = 556
Score = 137 (53.3 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 25/70 (35%), Positives = 40/70 (57%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNK-----CPLCRAVLFITPRTCAV 230
D F C++CL +L P+T PCGHS+C SC+ D+ ++ CP CR P C
Sbjct: 9 DQFSCSVCLDILKGPVTIPCGHSYCMSCITDCWDQEDQKQVYSCPQCRNTFTSRPVLCK- 67
Query: 231 SVTLNSIIQK 240
+V ++ +++K
Sbjct: 68 NVLIDEMVKK 77
>UNIPROTKB|Q8WVD3 [details] [associations]
symbol:RNF138 "E3 ubiquitin-protein ligase RNF138"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IPI] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089
SMART:SM00184 SMART:SM00355 UniPathway:UPA00143 Prosite:PS00518
Reactome:REACT_6900 GO:GO:0016055 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 GO:GO:0005622 EMBL:CH471088
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:P38398 CleanEx:HS_NARF
HOGENOM:HOG000230946 HOVERGEN:HBG074331 CTD:51444 eggNOG:NOG44750
KO:K10668 OMA:EANFTRQ OrthoDB:EOG4J9N0K EMBL:AF162680 EMBL:AK023579
EMBL:AK315761 EMBL:BT006878 EMBL:CR457150 EMBL:BC018107
EMBL:AL133557 IPI:IPI00012239 IPI:IPI00328938 PIR:T43439
RefSeq:NP_001178253.2 RefSeq:NP_057355.2 RefSeq:NP_937761.1
UniGene:Hs.302408 ProteinModelPortal:Q8WVD3 SMR:Q8WVD3
IntAct:Q8WVD3 MINT:MINT-1479614 STRING:Q8WVD3 PhosphoSite:Q8WVD3
DMDM:74762632 PRIDE:Q8WVD3 DNASU:51444 Ensembl:ENST00000257190
Ensembl:ENST00000261593 GeneID:51444 KEGG:hsa:51444 UCSC:uc002kxg.3
UCSC:uc002kxh.3 GeneCards:GC18P029671 HGNC:HGNC:17765 HPA:HPA041101
HPA:HPA041373 neXtProt:NX_Q8WVD3 PharmGKB:PA134952071
InParanoid:Q8WVD3 PhylomeDB:Q8WVD3 GenomeRNAi:51444 NextBio:55035
Bgee:Q8WVD3 CleanEx:HS_RNF138 Genevestigator:Q8WVD3 Uniprot:Q8WVD3
Length = 245
Score = 130 (50.8 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 176 DDFDCTLCLKLLYEPI-TTPCGHSFCRSCLFQSM-DRGNKCPLCRAVLFITPRTCAV-SV 232
DDF C +C ++L P+ TT C H FCR C +M + G CPLCR + R C ++
Sbjct: 14 DDFYCPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGAHCPLCRGNVTRRERACPERAL 73
Query: 233 TLNSIIQK 240
L +I++K
Sbjct: 74 DLENIMRK 81
>ZFIN|ZDB-GENE-080219-8 [details] [associations]
symbol:btr05 "bloodthirsty-related gene family,
member 5" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-080219-8 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00660000095328 EMBL:CT030144 IPI:IPI00834702
RefSeq:XP_003198957.1 UniGene:Dr.117914 Ensembl:ENSDART00000076300
GeneID:794264 KEGG:dre:794264 CTD:794264 NextBio:20931784
Bgee:F1QZD0 Uniprot:F1QZD0
Length = 505
Score = 136 (52.9 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 28/79 (35%), Positives = 42/79 (53%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGN--KCPLCRAVLFITPRTCAVSVT 233
++ C++CL + +P++TPCGH+FC+SCL S + CPLCR P ++
Sbjct: 34 EELQCSVCLDVFTDPVSTPCGHNFCKSCLNSSWENSQVCSCPLCRERFSDRP-DLKINTE 92
Query: 234 LNSIIQKNFPEEYAERKSE 252
L + Q F E R SE
Sbjct: 93 LRQLGQL-FKERLTVRISE 110
>UNIPROTKB|E9PR29 [details] [associations]
symbol:TRIM68 "E3 ubiquitin-protein ligase TRIM68"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC090719 HGNC:HGNC:21161
ChiTaRS:TRIM68 IPI:IPI00983538 ProteinModelPortal:E9PR29 SMR:E9PR29
Ensembl:ENST00000533021 ArrayExpress:E9PR29 Bgee:E9PR29
Uniprot:E9PR29
Length = 198
Score = 126 (49.4 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 26/72 (36%), Positives = 40/72 (55%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLF-------QSMDRGNKCPLCRAVLFITPRTC 228
++ C +C+ L EP++ CGHSFC SCL +S + G CPLCRA + PR
Sbjct: 12 EEVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCRAP--VQPRNL 69
Query: 229 AVSVTLNSIIQK 240
+ L ++++K
Sbjct: 70 RPNWQLANVVEK 81
>UNIPROTKB|F1MSN8 [details] [associations]
symbol:RNF168 "E3 ubiquitin-protein ligase RNF168"
species:9913 "Bos taurus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
IPI:IPI00906629 RefSeq:NP_001069757.2 UniGene:Bt.6014 GeneID:613812
KEGG:bta:613812 CTD:165918 NextBio:20898785 OMA:KSIFQMF
GeneTree:ENSGT00620000087973 EMBL:DAAA02001689
Ensembl:ENSBTAT00000017712 Uniprot:F1MSN8
Length = 573
Score = 138 (53.6 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 180 CTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKC-PLCRAVLFITPR-----TCAVSVT 233
C +C+++L+EP+T PC H+ C+ C ++++ + C P CR + R V++
Sbjct: 16 CQICVEILFEPVTLPCNHTLCKPCFESTVEKASLCCPFCRRRVSSWARYRSRTNSLVNME 75
Query: 234 LNSIIQKNFPEEYAERKSEHDS 255
L IIQK++P+E R S +S
Sbjct: 76 LWEIIQKHYPKECKLRASGQES 97
Score = 42 (19.8 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 360 EWVQDIHPEGVEDRADLQDLTNNAAEYA-RLWLRREKESARQDRRR 404
E+ ++I E RA ++ + EY +L E+E RQ +R
Sbjct: 119 EYEEEISKVEAERRACEEEENKASEEYIQKLLAEEEEEEKRQAEKR 164
>UNIPROTKB|Q0IIM1 [details] [associations]
symbol:RNF168 "E3 ubiquitin-protein ligase RNF168"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=ISS] [GO:0036352 "histone H2A-K15 ubiquitination"
evidence=ISS] [GO:0036351 "histone H2A-K13 ubiquitination"
evidence=ISS] [GO:0035518 "histone H2A monoubiquitination"
evidence=ISS] [GO:0045190 "isotype switching" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0070530
"K63-linked polyubiquitin binding" evidence=ISS] [GO:0070534
"protein K63-linked ubiquitination" evidence=ISS] [GO:0045900
"negative regulation of translational elongation" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0000151
"ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0070535
"histone H2A K63-linked ubiquitination" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0043130 "ubiquitin binding" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0045739
"positive regulation of DNA repair" evidence=ISS] [GO:0010212
"response to ionizing radiation" evidence=ISS] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 GO:GO:0010212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006302 GO:GO:0006511
GO:GO:0045190 GO:GO:0004842 GO:GO:0042393 GO:GO:0045739
GO:GO:0000151 GO:GO:0035518 GO:GO:0045900 GO:GO:0035861
GO:GO:0070530 EMBL:AAFC03087522 EMBL:AAFC03087524 EMBL:BC122577
IPI:IPI00906629 IPI:IPI00924239 RefSeq:NP_001069757.2
UniGene:Bt.6014 STRING:Q0IIM1 GeneID:613812 KEGG:bta:613812
CTD:165918 eggNOG:NOG240923 HOGENOM:HOG000154156 HOVERGEN:HBG067220
InParanoid:Q0IIM1 OrthoDB:EOG4THVT2 NextBio:20898785 GO:GO:0070535
GO:GO:0036351 GO:GO:0036352 Uniprot:Q0IIM1
Length = 573
Score = 138 (53.6 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 180 CTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKC-PLCRAVLFITPR-----TCAVSVT 233
C +C+++L+EP+T PC H+ C+ C ++++ + C P CR + R V++
Sbjct: 16 CQICVEILFEPVTLPCNHTLCKPCFESTVEKASLCCPFCRRRVSSWARYRSRTNSLVNME 75
Query: 234 LNSIIQKNFPEEYAERKSEHDS 255
L IIQK++P+E R S +S
Sbjct: 76 LWEIIQKHYPKECKLRASGQES 97
Score = 42 (19.8 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 360 EWVQDIHPEGVEDRADLQDLTNNAAEYA-RLWLRREKESARQDRRR 404
E+ ++I E RA ++ + EY +L E+E RQ +R
Sbjct: 119 EYEEEISKVEAERRACEEEENKASEEYIQKLLAEEEEEEKRQAEKR 164
>RGD|1306853 [details] [associations]
symbol:Traf6 "TNF receptor-associated factor 6, E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0001503 "ossification"
evidence=IEA;ISO] [GO:0001843 "neural tube closure"
evidence=IEA;ISO] [GO:0002726 "positive regulation of T cell
cytokine production" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;ISS] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005811
"lipid particle" evidence=ISO;ISS] [GO:0005829 "cytosol"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005938 "cell cortex" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IMP] [GO:0006955 "immune response"
evidence=ISO] [GO:0007165 "signal transduction" evidence=ISO]
[GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA;ISO] [GO:0007254 "JNK cascade" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=ISO] [GO:0009898 "internal side of plasma
membrane" evidence=IEA;ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0019221 "cytokine-mediated signaling pathway"
evidence=IMP] [GO:0019886 "antigen processing and presentation of
exogenous peptide antigen via MHC class II" evidence=IEA;ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030316
"osteoclast differentiation" evidence=IEA;ISO] [GO:0031435
"mitogen-activated protein kinase kinase kinase binding"
evidence=IEA;ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA;ISO] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA;ISO]
[GO:0031965 "nuclear membrane" evidence=IEA;ISO] [GO:0031996
"thioesterase binding" evidence=IEA;ISO] [GO:0032147 "activation of
protein kinase activity" evidence=ISO] [GO:0032743 "positive
regulation of interleukin-2 production" evidence=IEA;ISO]
[GO:0035631 "CD40 receptor complex" evidence=IEA;ISO] [GO:0042088
"T-helper 1 type immune response" evidence=IEA;ISO] [GO:0042102
"positive regulation of T cell proliferation" evidence=IEA;ISO]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043011 "myeloid dendritic cell differentiation"
evidence=IEA;ISO] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0043234 "protein
complex" evidence=IMP] [GO:0043422 "protein kinase B binding"
evidence=IEA;ISO] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=IEA;ISO] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IEA;ISO] [GO:0045410
"positive regulation of interleukin-6 biosynthetic process"
evidence=IEA;ISO] [GO:0045453 "bone resorption" evidence=IEA;ISO]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0046849 "bone remodeling" evidence=ISO]
[GO:0047485 "protein N-terminus binding" evidence=IEA;ISO]
[GO:0048468 "cell development" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048661
"positive regulation of smooth muscle cell proliferation"
evidence=IMP] [GO:0050852 "T cell receptor signaling pathway"
evidence=IEA;ISO] [GO:0051023 "regulation of immunoglobulin
secretion" evidence=IEA;ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA;ISO] [GO:0051865
"protein autoubiquitination" evidence=IEA;ISO] [GO:0070498
"interleukin-1-mediated signaling pathway" evidence=ISO;IMP]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO;ISS]
[GO:0070555 "response to interleukin-1" evidence=ISO] [GO:2000679
"positive regulation of transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
RGD:1306853 Prosite:PS00518 GO:GO:0005829 GO:GO:0005938
GO:GO:0048471 GO:GO:0043234 GO:GO:0006461 GO:GO:0042981
GO:GO:0019886 GO:GO:0050852 GO:GO:0042088 GO:GO:0007254
GO:GO:0005811 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0031965 GO:GO:0048661 GO:GO:0045944 GO:GO:0000122
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102
GO:GO:0001843 GO:GO:0042475 GO:GO:0045453 GO:GO:0004842
GO:GO:0001503 GO:GO:0007250 GO:GO:0009898 InterPro:IPR017907
GO:GO:0070534 GO:GO:0048468 GO:GO:0007249 SUPFAM:SSF49599
GO:GO:0043011 GO:GO:0035631 EMBL:CH473949 GO:GO:0045672
GO:GO:0030316 GO:GO:0032743 GO:GO:0051023 GO:GO:0043507
GO:GO:0070498 GO:GO:0045410 GO:GO:2000679 GO:GO:0045084
GO:GO:0031666 GO:GO:0002726 GeneTree:ENSGT00550000074359 CTD:7189
eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
OMA:SEAPIRQ OrthoDB:EOG4320XV PANTHER:PTHR10131:SF48 EMBL:BC168921
IPI:IPI00363697 RefSeq:NP_001101224.1 UniGene:Rn.220435
ProteinModelPortal:B5DF45 STRING:B5DF45 PhosphoSite:B5DF45
Ensembl:ENSRNOT00000006148 GeneID:311245 KEGG:rno:311245
UCSC:RGD:1306853 NextBio:663249 Genevestigator:B5DF45
Uniprot:B5DF45
Length = 530
Score = 136 (52.9 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 35/118 (29%), Positives = 57/118 (48%)
Query: 165 GRRIHGTPERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSM-DRGNKCPLCRAVLF- 222
G + P ++C +CL L E + TPCGH FC++C+ +S+ D G+KCP+ +L
Sbjct: 55 GYDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACITKSIRDAGHKCPVDNEILLE 114
Query: 223 --ITPRTCAVSVTLNSIIQKNFPEEYAERKSEHDSLINFGVDLMPLFVMDVVIPCQRF 278
+ P A L+ ++ P + +K E L + V F + + CQRF
Sbjct: 115 NQLFPDNFAKREILSLTVK--CPNKGCVQKMELRHLEDHQVHCE--FALVICPQCQRF 168
>UNIPROTKB|Q14258 [details] [associations]
symbol:TRIM25 "E3 ubiquitin/ISG15 ligase TRIM25"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0032480
"negative regulation of type I interferon production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0030054 "cell junction" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005829
GO:GO:0005634 Reactome:REACT_6900 GO:GO:0019048 GO:GO:0046872
GO:GO:0030054 GO:GO:0008270 GO:GO:0045087 GO:GO:0003700
GO:GO:0051607 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
GO:GO:0032480 InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407
SMART:SM00589 EMBL:D21205 EMBL:AC015912 EMBL:BC016924 EMBL:BC042541
IPI:IPI00029629 PIR:A49656 RefSeq:NP_005073.2 UniGene:Hs.528952
ProteinModelPortal:Q14258 SMR:Q14258 IntAct:Q14258 STRING:Q14258
PhosphoSite:Q14258 DMDM:12585547 PaxDb:Q14258 PeptideAtlas:Q14258
PRIDE:Q14258 Ensembl:ENST00000316881 Ensembl:ENST00000537230
GeneID:7706 KEGG:hsa:7706 UCSC:uc002iut.3 CTD:7706
GeneCards:GC17M054965 HGNC:HGNC:12932 HPA:HPA005909 MIM:600453
neXtProt:NX_Q14258 PharmGKB:PA37519 eggNOG:NOG253760
HOVERGEN:HBG101063 InParanoid:Q14258 KO:K10652 OMA:SHINGAT
OrthoDB:EOG42JNRQ PhylomeDB:Q14258 ChiTaRS:TRIM25 GenomeRNAi:7706
NextBio:29876 ArrayExpress:Q14258 Bgee:Q14258 CleanEx:HS_TRIM25
Genevestigator:Q14258 GermOnline:ENSG00000121060 Uniprot:Q14258
Length = 630
Score = 137 (53.3 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 27/67 (40%), Positives = 41/67 (61%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMD-RGNK--CPLCRAVLFITPRTCAVSV 232
++ C++CL+ EP+TTPCGH+FC SCL ++ +G+ CP CRAV P+ +V
Sbjct: 9 EELSCSICLEPFKEPVTTPCGHNFCGSCLNETWAVQGSPYLCPQCRAVYQARPQLHKNTV 68
Query: 233 TLNSIIQ 239
N + Q
Sbjct: 69 LCNVVEQ 75
Score = 44 (20.5 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 16/74 (21%), Positives = 29/74 (39%)
Query: 278 FPLHIFEPRYRLMVRRIMEGNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEI 337
F H +P R ++RR ++R+ P C VE C P + ++
Sbjct: 140 FQDHPLQPPVRDLLRRKCSQHNRLREFFC-PEHSECICHICLVEHKTCSPASLSQASADL 198
Query: 338 ESRRRFRILRSWDQ 351
E+ R ++ + Q
Sbjct: 199 EATLRHKLTVMYSQ 212
>ZFIN|ZDB-GENE-060929-548 [details] [associations]
symbol:btr12 "bloodthirsty-related gene family,
member 12" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-060929-548 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234136 HOVERGEN:HBG106862
GeneTree:ENSGT00660000095328 EMBL:BX664721 EMBL:BC124441
IPI:IPI00800043 RefSeq:NP_001070087.1 UniGene:Dr.87957
Ensembl:ENSDART00000110769 GeneID:767681 KEGG:dre:767681 CTD:767681
eggNOG:NOG331569 InParanoid:Q08C26 OrthoDB:EOG4640BN
NextBio:20918071 Uniprot:Q08C26
Length = 562
Score = 136 (52.9 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 23/67 (34%), Positives = 41/67 (61%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCL--FQSMDRGNKCPLCRAVLFITPRTCAVSVT 233
+ F C++CL++ EP++TPCGH+FC++CL F + + CP+C+ P +V+
Sbjct: 14 EQFSCSICLEVFVEPVSTPCGHTFCKACLEGFWNHSKRFLCPMCKKTFSRKPEL-SVNCV 72
Query: 234 LNSIIQK 240
L I ++
Sbjct: 73 LAEIAEQ 79
>UNIPROTKB|C9IZE0 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC024221 OrthoDB:EOG4K3KX1 HGNC:HGNC:30834
HOGENOM:HOG000199013 IPI:IPI00945336 ProteinModelPortal:C9IZE0
SMR:C9IZE0 STRING:C9IZE0 Ensembl:ENST00000471155
ArrayExpress:C9IZE0 Bgee:C9IZE0 Uniprot:C9IZE0
Length = 114
Score = 112 (44.5 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 26/88 (29%), Positives = 43/88 (48%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDR-GN-----------KCPLCRAVLFI 223
++ C +C + +P PC H+FCR+CL + GN KCP CR++ I
Sbjct: 6 EELTCPICYSIFEDPRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCRSITEI 65
Query: 224 TP---RTCAVSVTLNSIIQKNFPEEYAE 248
P + V+ L +II+K E++ +
Sbjct: 66 APTGIESLPVNFALRAIIEKYQQEDHPD 93
>UNIPROTKB|C9J9F0 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC024221 HGNC:HGNC:30834 HOGENOM:HOG000199013 IPI:IPI00945495
ProteinModelPortal:C9J9F0 SMR:C9J9F0 STRING:C9J9F0
Ensembl:ENST00000494486 ArrayExpress:C9J9F0 Bgee:C9J9F0
Uniprot:C9J9F0
Length = 111
Score = 112 (44.5 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 26/88 (29%), Positives = 43/88 (48%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDR-GN-----------KCPLCRAVLFI 223
++ C +C + +P PC H+FCR+CL + GN KCP CR++ I
Sbjct: 6 EELTCPICYSIFEDPRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCRSITEI 65
Query: 224 TP---RTCAVSVTLNSIIQKNFPEEYAE 248
P + V+ L +II+K E++ +
Sbjct: 66 APTGIESLPVNFALRAIIEKYQQEDHPD 93
>FB|FBgn0033828 [details] [associations]
symbol:CG17048 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 EMBL:AE013599
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BT023636 RefSeq:NP_001188918.1
RefSeq:NP_610866.1 UniGene:Dm.26922 SMR:Q4QPY0 IntAct:Q4QPY0
EnsemblMetazoa:FBtr0087721 EnsemblMetazoa:FBtr0302450 GeneID:36479
KEGG:dme:Dmel_CG17048 UCSC:CG17048-RA FlyBase:FBgn0033828
eggNOG:NOG274494 InParanoid:Q4QPY0 OMA:CAFCLDH OrthoDB:EOG479CQZ
GenomeRNAi:36479 NextBio:798771 Uniprot:Q4QPY0
Length = 124
Score = 92 (37.4 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 180 CTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGN----KCPLCRAVL 221
C CL + P C H+FC+SCL + N +CP+CR+ L
Sbjct: 40 CAFCLDRIQNPEKLHCNHAFCKSCLALYREARNWVAKRCPICRSSL 85
Score = 40 (19.1 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 253 HDSLINFGVDLMPLFVMDV 271
HD+ FG+ ++PL V+ +
Sbjct: 96 HDNWRLFGIMMVPLMVLSL 114
>UNIPROTKB|Q7ZWM8 [details] [associations]
symbol:rnf2-b "E3 ubiquitin-protein ligase RING2-B"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS] [GO:0071339
"MLL1 complex" evidence=ISS] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102
HOVERGEN:HBG079942 EMBL:BC046935 UniGene:Xl.76096
ProteinModelPortal:Q7ZWM8 SMR:Q7ZWM8 Xenbase:XB-GENE-6493980
Uniprot:Q7ZWM8
Length = 343
Score = 132 (51.5 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 34/107 (31%), Positives = 54/107 (50%)
Query: 146 SNPLQASLQNLERTTASLI-GRRIHGTPERT-DDFDCTLCLKLLYEPITTP-CGHSFCRS 202
S + SL L RT +++ G I +P + C +CL +L +TT C H FC
Sbjct: 11 SKTWELSLYELHRTPQAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSD 70
Query: 203 CLFQSMDRGNK-CPLCRAVLFITPRTCAVSVTLNSIIQKNFP--EEY 246
C+ ++ GNK CP CR L ++ R+ +++I K +P +EY
Sbjct: 71 CIVTALRSGNKECPTCRKKL-VSKRSLRPDPNFDALISKIYPSRDEY 116
>ZFIN|ZDB-GENE-030131-6081 [details] [associations]
symbol:trim35-40 "tripartite motif containing
35-40" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-030131-6081 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 eggNOG:KOG2177 HOGENOM:HOG000124586
OrthoDB:EOG4QNMW8 EMBL:BC095707 IPI:IPI00613044 UniGene:Dr.80659
ProteinModelPortal:Q502G4 ArrayExpress:Q502G4 Uniprot:Q502G4
Length = 470
Score = 134 (52.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 27/84 (32%), Positives = 45/84 (53%)
Query: 172 PERTDDFDCTLCLKLLYEPITTPCGHSFCRSCL--FQSMDRGNKCPLCRAVLFITPRTCA 229
P ++F C +C + P+ CGHSFCR C+ F + ++ +CP+CR T R +
Sbjct: 8 PFTEEEFSCPVCRDVFTHPVVLTCGHSFCRGCIEEFWNFNKTRRCPVCRQT---TEREPS 64
Query: 230 VSVTLNSIIQ-----KNFPEEYAE 248
++ TL ++ Q + F EE+ E
Sbjct: 65 LNFTLRNLCQSFVNHRRFLEEHCE 88
>UNIPROTKB|Q6DJN2 [details] [associations]
symbol:traf6-b "TNF receptor-associated factor 6-B"
species:8355 "Xenopus laevis" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IDA] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0007250 InterPro:IPR017907 GO:GO:0070534
SUPFAM:SSF49599 HOVERGEN:HBG060248 KO:K03175 PANTHER:PTHR10131:SF48
EMBL:BC075143 RefSeq:NP_001086348.1 UniGene:Xl.29694
ProteinModelPortal:Q6DJN2 SMR:Q6DJN2 GeneID:444777 KEGG:xla:444777
CTD:444777 Xenbase:XB-GENE-865394 Uniprot:Q6DJN2
Length = 556
Score = 135 (52.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 25/69 (36%), Positives = 40/69 (57%)
Query: 154 QNLERTTASLIGRRIHGTPERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSM-DRGN 212
Q+LE + G + P ++C +CL L E + TPCGH FC++C+ +S+ D G+
Sbjct: 48 QSLE--VEEVQGYDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIVKSLRDAGH 105
Query: 213 KCPLCRAVL 221
KCP+ +L
Sbjct: 106 KCPVDNEIL 114
>UNIPROTKB|C9JYD0 [details] [associations]
symbol:PCGF3 "Polycomb group RING finger protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC139887 HGNC:HGNC:10066 ChiTaRS:PCGF3
EMBL:AC107464 IPI:IPI00879042 ProteinModelPortal:C9JYD0 SMR:C9JYD0
STRING:C9JYD0 Ensembl:ENST00000427463 ArrayExpress:C9JYD0
Bgee:C9JYD0 Uniprot:C9JYD0
Length = 62
Score = 111 (44.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 180 CTLCLKLLYEPIT-TPCGHSFCRSCLFQSMDRGNKCPLCRAVL 221
C LC L + T T C H+FCRSCL + ++ N CP CR V+
Sbjct: 17 CRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVI 59
>ZFIN|ZDB-GENE-070410-134 [details] [associations]
symbol:rfwd2 "ring finger and WD repeat domain 2"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Prosite:PS00518
ZFIN:ZDB-GENE-070410-134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 CTD:64326
HOVERGEN:HBG054995 OrthoDB:EOG4M0F18 EMBL:BC139708 IPI:IPI00851801
RefSeq:NP_001083011.1 UniGene:Dr.159867 ProteinModelPortal:A4QP94
STRING:A4QP94 GeneID:100037391 KEGG:dre:100037391 NextBio:20788550
Uniprot:A4QP94
Length = 694
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 151 ASLQNLERTTASLIGRRIHGTPERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDR 210
A L +L R L I+ ++++DF C +C +++ E T CGHSFC C+ QS++
Sbjct: 70 ARLGSLSRKRP-LYNGLINPYEDKSNDFVCPICFEMIEEAHMTKCGHSFCYKCIRQSLED 128
Query: 211 GNKCPLCRAVL 221
N+CP C ++
Sbjct: 129 SNRCPKCNYII 139
>ZFIN|ZDB-GENE-060512-201 [details] [associations]
symbol:ftr14 "finTRIM family, member 14"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001496 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
PROSITE:PS50225 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-060512-201 GO:GO:0035556 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00670000097622
EMBL:CR848710 IPI:IPI00863255 RefSeq:NP_001038735.2
UniGene:Dr.76366 Ensembl:ENSDART00000098284 GeneID:692298
KEGG:dre:692298 CTD:692298 OMA:INTAANN NextBio:20902494
ArrayExpress:F1QHA1 Bgee:F1QHA1 Uniprot:F1QHA1
Length = 565
Score = 138 (53.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 28/71 (39%), Positives = 38/71 (53%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNK-----CPLCRAVLFITPRTCAV 230
D F C++CL LL P+T PCGHS+C SC+ D+ + CP CR TPR
Sbjct: 11 DQFSCSICLDLLKGPVTIPCGHSYCMSCILDCWDQDEQKGVYSCPQCRQTF--TPRPALG 68
Query: 231 SVT-LNSIIQK 240
T L +++K
Sbjct: 69 KNTMLAEVVEK 79
Score = 40 (19.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 7/36 (19%), Positives = 16/36 (44%)
Query: 291 VRRIMEGNHRMGMVIIDPTTGSVADFACEVEITECE 326
+R +E + R +++ T + C +E + E
Sbjct: 221 LRAAVESHKRSAQAVVEDTERIFTELICSIEKSRSE 256
>UNIPROTKB|F1NQ64 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 OMA:PICFEMI
GeneTree:ENSGT00700000104377 EMBL:AADN02034166 IPI:IPI00602963
Ensembl:ENSGALT00000007170 Uniprot:F1NQ64
Length = 717
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 173 ERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVL 221
++++DF C +C ++ E T CGHSFC C+ QS++ N+CP C V+
Sbjct: 115 DKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVV 163
>UNIPROTKB|F1M8E0 [details] [associations]
symbol:Rnf168 "E3 ubiquitin-protein ligase RNF168"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
RGD:1585168 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006302
GO:GO:0004842 GO:GO:0045739 GO:GO:0000151 GO:GO:0070535
GeneTree:ENSGT00620000087973 IPI:IPI00764042
Ensembl:ENSRNOT00000002395 ArrayExpress:F1M8E0 Uniprot:F1M8E0
Length = 565
Score = 136 (52.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 180 CTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKC-PLCRAVL-----FITPRTCAVSVT 233
C +C+++L EP+T PC H+ C C ++++ N C P CR + + T R V+
Sbjct: 18 CGICMEILVEPVTLPCNHTLCNPCFQSTVEKANLCCPFCRRRVSSWTRYHTRRNSLVNTD 77
Query: 234 LNSIIQKNFPEEYAERKSEHDS 255
L IIQK++ +E R S +S
Sbjct: 78 LWEIIQKHYAKECKLRISGQES 99
Score = 42 (19.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 363 QDIHPEGVEDRADLQDLTNNAAEYARLWL--RREKESARQDRRRLE 406
++I E +A ++ + EY + L E+E R +RRR E
Sbjct: 123 EEISKVEAERQASKEEENKASEEYIQRLLAEEEEEEKRRTERRRSE 168
>UNIPROTKB|E2RRJ5 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Prosite:PS00518
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 KO:K10143 OMA:PICFEMI
CTD:64326 GeneTree:ENSGT00700000104377 EMBL:AAEX03005193
EMBL:AAEX03005194 RefSeq:XP_537181.2 ProteinModelPortal:E2RRJ5
Ensembl:ENSCAFT00000022674 GeneID:480060 KEGG:cfa:480060
Uniprot:E2RRJ5
Length = 733
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 161 ASLIGRRIHGTPERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAV 220
A L I+ +++DF C +C ++ E T CGHSFC C+ QS++ N+CP C V
Sbjct: 119 APLCNGLINSYEGKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYV 178
Query: 221 L 221
+
Sbjct: 179 V 179
>MGI|MGI:1347046 [details] [associations]
symbol:Rfwd2 "ring finger and WD repeat domain 2"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 UniPathway:UPA00143 MGI:MGI:1347046
Prosite:PS00518 GO:GO:0005737 GO:GO:0005813 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0016874 GO:GO:0016607 GO:GO:0008270 eggNOG:COG2319
GO:GO:0005925 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 OMA:PICFEMI
CTD:64326 HOVERGEN:HBG054995 OrthoDB:EOG4M0F18 ChiTaRS:RFWD2
EMBL:AF151110 EMBL:BC082804 IPI:IPI00621828 RefSeq:NP_036061.1
UniGene:Mm.328135 ProteinModelPortal:Q9R1A8 SMR:Q9R1A8
STRING:Q9R1A8 PhosphoSite:Q9R1A8 PaxDb:Q9R1A8 PRIDE:Q9R1A8
Ensembl:ENSMUST00000076894 GeneID:26374 KEGG:mmu:26374
UCSC:uc007ddz.1 GeneTree:ENSGT00700000104377 InParanoid:Q9R1A8
NextBio:304277 Bgee:Q9R1A8 CleanEx:MM_RFWD2 Genevestigator:Q9R1A8
GermOnline:ENSMUSG00000048949 Uniprot:Q9R1A8
Length = 733
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 173 ERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVL 221
++++DF C +C ++ E T CGHSFC C+ QS++ N+CP C V+
Sbjct: 131 DKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVV 179
>UNIPROTKB|Q3ZCC3 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9913 "Bos taurus" [GO:0005811 "lipid particle"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005938 "cell cortex" evidence=IEA] [GO:2000679
"positive regulation of transcription regulatory region DNA
binding" evidence=IEA] [GO:0070498 "interleukin-1-mediated
signaling pathway" evidence=IEA] [GO:0051092 "positive regulation
of NF-kappaB transcription factor activity" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
[GO:0050852 "T cell receptor signaling pathway" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0048468 "cell development" evidence=IEA] [GO:0047485 "protein
N-terminus binding" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=IEA] [GO:0045453 "bone resorption" evidence=IEA]
[GO:0045410 "positive regulation of interleukin-6 biosynthetic
process" evidence=IEA] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IEA] [GO:0043507
"positive regulation of JUN kinase activity" evidence=IEA]
[GO:0043422 "protein kinase B binding" evidence=IEA] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0043011 "myeloid dendritic cell differentiation"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IEA] [GO:0042102 "positive regulation of T cell
proliferation" evidence=IEA] [GO:0042088 "T-helper 1 type immune
response" evidence=IEA] [GO:0035631 "CD40 receptor complex"
evidence=IEA] [GO:0032743 "positive regulation of interleukin-2
production" evidence=IEA] [GO:0031996 "thioesterase binding"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031666 "positive regulation of lipopolysaccharide-mediated
signaling pathway" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0031435 "mitogen-activated
protein kinase kinase kinase binding" evidence=IEA] [GO:0030316
"osteoclast differentiation" evidence=IEA] [GO:0019886 "antigen
processing and presentation of exogenous peptide antigen via MHC
class II" evidence=IEA] [GO:0009898 "internal side of plasma
membrane" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0007249
"I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0002726 "positive regulation of T cell
cytokine production" evidence=IEA] [GO:0001843 "neural tube
closure" evidence=IEA] [GO:0001503 "ossification" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005829 GO:GO:0005938
GO:GO:0048471 GO:GO:0042981 GO:GO:0019886 GO:GO:0050852
GO:GO:0042088 GO:GO:0005811 GO:GO:0046872 GO:GO:0043123
GO:GO:0008270 GO:GO:0031965 GO:GO:0045944 GO:GO:0000122
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102
GO:GO:0001843 GO:GO:0042475 GO:GO:0045453 GO:GO:0004842
GO:GO:0001503 GO:GO:0007250 GO:GO:0009898 InterPro:IPR017907
GO:GO:0070534 GO:GO:0048468 GO:GO:0007249 SUPFAM:SSF49599
GO:GO:0043011 GO:GO:0035631 GO:GO:0045672 GO:GO:0030316
GO:GO:0032743 GO:GO:0051023 GO:GO:0043507 GO:GO:0070498
GO:GO:0045410 GO:GO:2000679 GO:GO:0045084 GO:GO:0031666
GO:GO:0002726 GeneTree:ENSGT00550000074359 EMBL:DQ319074
EMBL:DQ407276 EMBL:BC102522 IPI:IPI00710621 RefSeq:NP_001029833.1
UniGene:Bt.89201 ProteinModelPortal:Q3ZCC3 SMR:Q3ZCC3 STRING:Q3ZCC3
PRIDE:Q3ZCC3 Ensembl:ENSBTAT00000021630 GeneID:539124
KEGG:bta:539124 CTD:7189 eggNOG:NOG289765 HOGENOM:HOG000006625
HOVERGEN:HBG060248 InParanoid:Q3ZCC3 KO:K03175 OMA:SEAPIRQ
OrthoDB:EOG4320XV NextBio:20877796 PANTHER:PTHR10131:SF48
Uniprot:Q3ZCC3
Length = 542
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 165 GRRIHGTPERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSM-DRGNKCPLCRAVL 221
G + P ++C +CL L E + TPCGH FC++C+ +S+ D G+KCP+ +L
Sbjct: 56 GYDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEIL 113
>ZFIN|ZDB-GENE-070912-196 [details] [associations]
symbol:ftr12 "finTRIM family, member 12"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070912-196 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 EMBL:BX005083 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00670000097622 IPI:IPI00637143
Ensembl:ENSDART00000056161 Bgee:F1QYZ8 Uniprot:F1QYZ8
Length = 547
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNK-----CPLCRAVLFITPRTCAV 230
D F+C+LCL+LL + + PCGHS+C SC+ D+ + CP CR TPR
Sbjct: 11 DQFNCSLCLELLKDSVAIPCGHSYCMSCISDCWDQDEQKGVYSCPQCRQTF--TPRPALG 68
Query: 231 SVT-LNSIIQK 240
T L +++K
Sbjct: 69 KNTMLTEVVEK 79
>ZFIN|ZDB-GENE-070912-322 [details] [associations]
symbol:ftr23 "finTRIM family, member 23"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070912-322 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00670000097622 EMBL:BX548047 IPI:IPI00512769
Ensembl:ENSDART00000029400 Bgee:F1QJB9 Uniprot:F1QJB9
Length = 552
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 26/71 (36%), Positives = 40/71 (56%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNK-----CPLCRAVLFITPRTCA- 229
D F C++CL LL EP+T PCGHS+C +C+ ++ + CP CR TPR
Sbjct: 11 DQFSCSVCLDLLKEPVTIPCGHSYCMNCITDCWNQDEQRRVYSCPQCRQTF--TPRPALN 68
Query: 230 VSVTLNSIIQK 240
+V + +++K
Sbjct: 69 KNVVMAEMVEK 79
>UNIPROTKB|Q3MV19 [details] [associations]
symbol:traf6-a "TNF receptor-associated factor 6-A"
species:8355 "Xenopus laevis" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IDA] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0007250 InterPro:IPR017907 GO:GO:0070534
SUPFAM:SSF49599 HOVERGEN:HBG060248 KO:K03175 PANTHER:PTHR10131:SF48
EMBL:AB100960 EMBL:BC108562 RefSeq:NP_001089863.1 UniGene:Xl.14682
ProteinModelPortal:Q3MV19 SMR:Q3MV19 GeneID:734929 KEGG:xla:734929
CTD:734929 Xenbase:XB-GENE-6254727 Uniprot:Q3MV19
Length = 556
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 24/69 (34%), Positives = 40/69 (57%)
Query: 154 QNLERTTASLIGRRIHGTPERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSM-DRGN 212
QNL+ + G + P ++C +CL L E + TPCGH FC++C+ +S+ + G+
Sbjct: 48 QNLD--VEEIQGYDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACILKSLRNAGH 105
Query: 213 KCPLCRAVL 221
KCP+ +L
Sbjct: 106 KCPVDNEIL 114
>ZFIN|ZDB-GENE-080516-2 [details] [associations]
symbol:btr06 "bloodthirsty-related gene family,
member 6" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-080516-2 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00660000095328 EMBL:CT030144 IPI:IPI00770946
Ensembl:ENSDART00000076318 Bgee:F1QZB6 Uniprot:F1QZB6
Length = 556
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGN--KCPLCR 218
++ C++CL + +P++TPCGH+FC+SCL S + CPLCR
Sbjct: 35 EELQCSVCLDVFTDPVSTPCGHNFCKSCLNSSWENSQVCSCPLCR 79
>UNIPROTKB|Q5TJF3 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9615 "Canis lupus familiaris" [GO:0035102 "PRC1 complex"
evidence=ISS] [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0048593 "camera-type
eye morphogenesis" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0035518 "histone
H2A monoubiquitination" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001739 "sex chromatin"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0048593 GO:GO:0000151
InterPro:IPR017907 EMBL:AJ630366 GO:GO:0035518 GO:GO:0035102
GO:GO:0001739 RefSeq:NP_001041593.1 UniGene:Cfa.40924
ProteinModelPortal:Q5TJF3 SMR:Q5TJF3 STRING:Q5TJF3
Ensembl:ENSCAFT00000001442 Ensembl:ENSCAFT00000044064 GeneID:607905
KEGG:cfa:607905 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 InParanoid:Q5TJF3 KO:K10695 OMA:QSASKTW
OrthoDB:EOG4SXND4 NextBio:20893594 Uniprot:Q5TJF3
Length = 406
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 36/108 (33%), Positives = 52/108 (48%)
Query: 146 SNPLQASLQNLERTTASLI--GRRIHGTPERT-DDFDCTLCLKLLYEPITTP-CGHSFCR 201
S + SL L RT I G I +P + C +CL +L +TT C H FC
Sbjct: 11 SKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCS 70
Query: 202 SCLFQSMDRGNK-CPLCRAVLFITPRTCAVSVTLNSIIQKNFP--EEY 246
C+ ++ GNK CP CR L ++ R+ +++I K +P EEY
Sbjct: 71 DCIVTALRSGNKECPTCRKKL-VSKRSLRPDPNFDALISKIYPSREEY 117
>UNIPROTKB|Q06587 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0048593 "camera-type eye
morphogenesis" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0016568 "chromatin modification" evidence=NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0031519 "PcG protein complex" evidence=IDA]
[GO:0035518 "histone H2A monoubiquitination" evidence=IDA]
[GO:0035102 "PRC1 complex" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0048593 GO:GO:0000151
InterPro:IPR017907 EMBL:AL031228 GO:GO:0035518 GO:GO:0035102
EMBL:AL645940 EMBL:AL844527 EMBL:CR759733 EMBL:CR759786
EMBL:AL713971 EMBL:CR847841 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW
OrthoDB:EOG4SXND4 EMBL:Z14000 EMBL:BT007352 EMBL:AK289355
EMBL:CR547129 EMBL:BC002922 EMBL:BC051866 IPI:IPI00455876
IPI:IPI00641330 PIR:A47380 RefSeq:NP_002922.2 UniGene:Hs.631989
ProteinModelPortal:Q06587 SMR:Q06587 DIP:DIP-42043N IntAct:Q06587
MINT:MINT-1327105 STRING:Q06587 PhosphoSite:Q06587 DMDM:90110053
PaxDb:Q06587 PeptideAtlas:Q06587 PRIDE:Q06587 DNASU:6015
Ensembl:ENST00000374656 Ensembl:ENST00000383212
Ensembl:ENST00000415941 Ensembl:ENST00000427374
Ensembl:ENST00000430233 Ensembl:ENST00000436128 GeneID:6015
KEGG:hsa:6015 UCSC:uc003odk.3 GeneCards:GC06P033177 HGNC:HGNC:10018
HPA:HPA008701 MIM:602045 neXtProt:NX_Q06587 PharmGKB:PA34393
InParanoid:Q06587 GenomeRNAi:6015 NextBio:23467 ArrayExpress:Q06587
Bgee:Q06587 CleanEx:HS_RING1 Genevestigator:Q06587
GermOnline:ENSG00000204227 Uniprot:Q06587
Length = 406
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 36/108 (33%), Positives = 52/108 (48%)
Query: 146 SNPLQASLQNLERTTASLI--GRRIHGTPERT-DDFDCTLCLKLLYEPITTP-CGHSFCR 201
S + SL L RT I G I +P + C +CL +L +TT C H FC
Sbjct: 11 SKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCS 70
Query: 202 SCLFQSMDRGNK-CPLCRAVLFITPRTCAVSVTLNSIIQKNFP--EEY 246
C+ ++ GNK CP CR L ++ R+ +++I K +P EEY
Sbjct: 71 DCIVTALRSGNKECPTCRKKL-VSKRSLRPDPNFDALISKIYPSREEY 117
>UNIPROTKB|A5D9P0 [details] [associations]
symbol:RING1 "Ring finger protein 1" species:9823 "Sus
scrofa" [GO:0048593 "camera-type eye morphogenesis" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0035102 "PRC1 complex" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001739 "sex chromatin" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0016604 GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907
GO:GO:0035518 GO:GO:0035102 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW OrthoDB:EOG4SXND4
EMBL:CT737383 EMBL:BX640585 RefSeq:NP_001177164.1 UniGene:Ssc.5967
ProteinModelPortal:A5D9P0 SMR:A5D9P0 STRING:A5D9P0
Ensembl:ENSSSCT00000001648 GeneID:100153162 KEGG:ssc:100153162
ArrayExpress:A5D9P0 Uniprot:A5D9P0
Length = 406
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 36/108 (33%), Positives = 52/108 (48%)
Query: 146 SNPLQASLQNLERTTASLI--GRRIHGTPERT-DDFDCTLCLKLLYEPITTP-CGHSFCR 201
S + SL L RT I G I +P + C +CL +L +TT C H FC
Sbjct: 11 SKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCS 70
Query: 202 SCLFQSMDRGNK-CPLCRAVLFITPRTCAVSVTLNSIIQKNFP--EEY 246
C+ ++ GNK CP CR L ++ R+ +++I K +P EEY
Sbjct: 71 DCIVTALRSGNKECPTCRKKL-VSKRSLRPDPNFDALISKIYPSREEY 117
>MGI|MGI:1101770 [details] [associations]
symbol:Ring1 "ring finger protein 1" species:10090 "Mus
musculus" [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0001739 "sex chromatin" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI;IMP] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016574 "histone ubiquitination"
evidence=IGI;IDA] [GO:0016604 "nuclear body" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=ISO;IDA] [GO:0035102 "PRC1 complex"
evidence=ISO] [GO:0035518 "histone H2A monoubiquitination"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048593 "camera-type eye morphogenesis"
evidence=IGI] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1101770 Pfam:PF00097
Prosite:PS00518 GO:GO:0005737 GO:GO:0045892 GO:GO:0009952
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0016604 GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907
EMBL:AF100956 GO:GO:0035518 GO:GO:0031519 GO:GO:0035102
GO:GO:0016574 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW OrthoDB:EOG4SXND4
EMBL:Y12881 EMBL:AK154962 EMBL:AK155509 EMBL:CT010219 EMBL:BC009070
EMBL:BC082771 IPI:IPI00344616 IPI:IPI00742283 IPI:IPI00742392
RefSeq:NP_033092.3 UniGene:Mm.20343 ProteinModelPortal:O35730
SMR:O35730 IntAct:O35730 MINT:MINT-158295 STRING:O35730
PhosphoSite:O35730 PaxDb:O35730 PRIDE:O35730
Ensembl:ENSMUST00000025183 GeneID:19763 KEGG:mmu:19763
UCSC:uc008cas.2 InParanoid:O35730 NextBio:297212 Bgee:O35730
CleanEx:MM_RING1 Genevestigator:O35730
GermOnline:ENSMUSG00000024325 Uniprot:O35730
Length = 406
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 36/108 (33%), Positives = 52/108 (48%)
Query: 146 SNPLQASLQNLERTTASLI--GRRIHGTPERT-DDFDCTLCLKLLYEPITTP-CGHSFCR 201
S + SL L RT I G I +P + C +CL +L +TT C H FC
Sbjct: 11 SKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCS 70
Query: 202 SCLFQSMDRGNK-CPLCRAVLFITPRTCAVSVTLNSIIQKNFP--EEY 246
C+ ++ GNK CP CR L ++ R+ +++I K +P EEY
Sbjct: 71 DCIVTALRSGNKECPTCRKKL-VSKRSLRPDPNFDALISKIYPSREEY 117
>RGD|3576 [details] [associations]
symbol:Ring1 "ring finger protein 1" species:10116 "Rattus
norvegicus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA;ISO]
[GO:0001739 "sex chromatin" evidence=IEA;ISO] [GO:0003682 "chromatin
binding" evidence=IEA;ISO] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0016574 "histone ubiquitination" evidence=ISO]
[GO:0016604 "nuclear body" evidence=ISO] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISO;ISS]
[GO:0035102 "PRC1 complex" evidence=ISO;ISS] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0048593 "camera-type eye morphogenesis" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Pfam:PF00097 RGD:3576 Prosite:PS00518 GO:GO:0005737 GO:GO:0045892
GO:GO:0009952 GO:GO:0046872 GO:GO:0016607 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907 GO:GO:0035518
GO:GO:0035102 EMBL:BX883042 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917 HOVERGEN:HBG079942
KO:K10695 OMA:QSASKTW OrthoDB:EOG4SXND4 EMBL:BC098635 EMBL:X95474
IPI:IPI00417840 IPI:IPI00742451 RefSeq:NP_997714.2 UniGene:Rn.116589
ProteinModelPortal:Q6MGB6 SMR:Q6MGB6 STRING:Q6MGB6
Ensembl:ENSRNOT00000000543 GeneID:309626 KEGG:rno:309626
UCSC:RGD:3576 InParanoid:Q6MGB6 NextBio:661076 Genevestigator:Q6MGB6
GermOnline:ENSRNOG00000000467 Uniprot:Q6MGB6
Length = 406
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 36/108 (33%), Positives = 52/108 (48%)
Query: 146 SNPLQASLQNLERTTASLI--GRRIHGTPERT-DDFDCTLCLKLLYEPITTP-CGHSFCR 201
S + SL L RT I G I +P + C +CL +L +TT C H FC
Sbjct: 11 SKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCS 70
Query: 202 SCLFQSMDRGNK-CPLCRAVLFITPRTCAVSVTLNSIIQKNFP--EEY 246
C+ ++ GNK CP CR L ++ R+ +++I K +P EEY
Sbjct: 71 DCIVTALRSGNKECPTCRKKL-VSKRSLRPDPNFDALISKIYPSREEY 117
>UNIPROTKB|E2RDE8 [details] [associations]
symbol:TRAF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070498 "interleukin-1-mediated signaling
pathway" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0050852 "T cell receptor signaling pathway"
evidence=IEA] [GO:0048468 "cell development" evidence=IEA]
[GO:0046849 "bone remodeling" evidence=IEA] [GO:0045672 "positive
regulation of osteoclast differentiation" evidence=IEA] [GO:0043507
"positive regulation of JUN kinase activity" evidence=IEA]
[GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0001503
"ossification" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027139 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Prosite:PS00518 GO:GO:0007165
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 SUPFAM:SSF49599
GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF48
EMBL:AAEX03011373 Ensembl:ENSCAFT00000010962 OMA:CLMALRN
Uniprot:E2RDE8
Length = 562
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 165 GRRIHGTPERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSM-DRGNKCPLCRAVL 221
G + P ++C +CL L E + TPCGH FC++C+ +S+ D G+KCP+ +L
Sbjct: 55 GYDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEIL 112
>ZFIN|ZDB-GENE-110408-1 [details] [associations]
symbol:ftr28l "finTRIM family, member 28-like"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 Prosite:PS00518 ZFIN:ZDB-GENE-110408-1 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00670000097622 EMBL:AL929146
IPI:IPI00971906 Ensembl:ENSDART00000113067 Uniprot:F1R059
Length = 358
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLF-----QSMDRGNKCPLCRAVLFITPRTC-A 229
D+F C +CL LL +P++ PCGHS+C SC+ + R CP CR +PR A
Sbjct: 11 DEFSCAVCLDLLKDPVSIPCGHSYCMSCITDCWNQEDQKRVYSCPQCRQTF--SPRPALA 68
Query: 230 VSVTLNSIIQK 240
+ L +++K
Sbjct: 69 KNTMLAEVLEK 79
>UNIPROTKB|E2R9S2 [details] [associations]
symbol:RNF168 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070535 "histone H2A K63-linked
ubiquitination" evidence=IEA] [GO:0070530 "K63-linked polyubiquitin
binding" evidence=IEA] [GO:0045900 "negative regulation of
translational elongation" evidence=IEA] [GO:0045739 "positive
regulation of DNA repair" evidence=IEA] [GO:0045190 "isotype
switching" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0036352 "histone H2A-K15 ubiquitination"
evidence=IEA] [GO:0036351 "histone H2A-K13 ubiquitination"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006302 GO:GO:0004842 GO:GO:0045739 GO:GO:0000151 CTD:165918
GO:GO:0070535 OMA:KSIFQMF GeneTree:ENSGT00620000087973
EMBL:AAEX03017096 RefSeq:XP_545152.1 ProteinModelPortal:E2R9S2
Ensembl:ENSCAFT00000020652 GeneID:488029 KEGG:cfa:488029
NextBio:20861476 Uniprot:E2R9S2
Length = 570
Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 180 CTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKC-PLCRAVL-----FITPRTCAVSVT 233
C +C+ +L EPIT PCGH+ C C ++++ + C P CR + + T R V+
Sbjct: 16 CRICVDILVEPITLPCGHTLCSPCFQATVEKASLCCPFCRRRVSSWTRYHTRRNSLVNAE 75
Query: 234 LNSIIQKNFPEEYAERKS 251
L ++IQK++ E R S
Sbjct: 76 LWAVIQKHYARECKRRAS 93
>ZFIN|ZDB-GENE-070912-227 [details] [associations]
symbol:ftr05 "finTRIM family, member 5"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-070912-227 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
eggNOG:KOG2177 EMBL:BX572635 OrthoDB:EOG4R23TJ
GeneTree:ENSGT00670000097622 HOVERGEN:HBG106862 IPI:IPI00513408
Ensembl:ENSDART00000146444 OMA:ERTRCEV Uniprot:B0S721
Length = 292
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 25/56 (44%), Positives = 32/56 (57%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNK-----CPLCRAVLFITPR 226
D F+C++CL LL +P PCGHSFC SC+ D+ + CP CR TPR
Sbjct: 12 DQFNCSICLDLLKDPAAIPCGHSFCMSCISGYWDQDEQKGVYSCPQCRQTF--TPR 65
>ZFIN|ZDB-GENE-081104-54 [details] [associations]
symbol:ftr51 "finTRIM family, member 51"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-081104-54 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00670000097622
EMBL:CU104731 IPI:IPI00860861 Ensembl:ENSDART00000132323
Bgee:F1Q5R2 Uniprot:F1Q5R2
Length = 530
Score = 133 (51.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 25/70 (35%), Positives = 37/70 (52%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNK-----CPLCRAVLFITPRTCAV 230
D+F C +CL LL P PCGHS+C+SC+ D+ + CP CR + P A
Sbjct: 9 DEFTCPVCLDLLKHPAAIPCGHSYCKSCITDCWDQEEEKGVYSCPQCRQTFSLRP-ALAK 67
Query: 231 SVTLNSIIQK 240
+ L +++K
Sbjct: 68 NTILAEVVEK 77
>ZFIN|ZDB-GENE-070912-585 [details] [associations]
symbol:ftr10 "finTRIM family, member 10"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-070912-585 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00670000097622 EMBL:BX005044 IPI:IPI00868260
Ensembl:ENSDART00000136105 Uniprot:E9QFY2
Length = 276
Score = 128 (50.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 30/85 (35%), Positives = 42/85 (49%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNK-----CPLCRAVLFITPRTCAV 230
D F C +CL LL +P+ PCGHS+C SC+ D+ + CP CR TPR
Sbjct: 12 DQFSCLICLDLLKDPVAIPCGHSYCMSCISGYWDQDEQKGVYSCPQCRQTF--TPRPA-- 67
Query: 231 SVTLNSIIQKNFPEEYAERKSEHDS 255
+ KN + A R ++H+S
Sbjct: 68 -------LGKNTMLDEAARPAQHNS 85
>RGD|621485 [details] [associations]
symbol:Rnf138 "ring finger protein 138, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=ISO] InterPro:IPR001841 InterPro:IPR015880
PROSITE:PS50089 SMART:SM00184 SMART:SM00355 UniPathway:UPA00143
RGD:621485 Prosite:PS00518 GO:GO:0016055 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0016567 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:P38398 HOVERGEN:HBG074331
CTD:51444 KO:K10668 EMBL:AF315468 EMBL:BC061821 IPI:IPI00200841
RefSeq:NP_446040.1 UniGene:Rn.6814 ProteinModelPortal:Q99PD2
GeneID:94196 KEGG:rno:94196 NextBio:617854 Genevestigator:Q99PD2
Uniprot:Q99PD2
Length = 209
Score = 124 (48.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 176 DDFDCTLCLKLLYEPI-TTPCGHSFCRSCLFQSM-DRGNKCPLCRAVLFITPRTCAV-SV 232
DDF C +C ++L P+ T C H FCR C +M + G CPLCR + R C ++
Sbjct: 14 DDFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGSVTRRERACPERAI 73
Query: 233 TLNSIIQK 240
L +I+++
Sbjct: 74 DLENIMRR 81
>UNIPROTKB|Q99PD2 [details] [associations]
symbol:Rnf138 "E3 ubiquitin-protein ligase RNF138"
species:10116 "Rattus norvegicus" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184
SMART:SM00355 UniPathway:UPA00143 RGD:621485 Prosite:PS00518
GO:GO:0016055 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0016567 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:P38398 HOVERGEN:HBG074331 CTD:51444 KO:K10668 EMBL:AF315468
EMBL:BC061821 IPI:IPI00200841 RefSeq:NP_446040.1 UniGene:Rn.6814
ProteinModelPortal:Q99PD2 GeneID:94196 KEGG:rno:94196
NextBio:617854 Genevestigator:Q99PD2 Uniprot:Q99PD2
Length = 209
Score = 124 (48.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 176 DDFDCTLCLKLLYEPI-TTPCGHSFCRSCLFQSM-DRGNKCPLCRAVLFITPRTCAV-SV 232
DDF C +C ++L P+ T C H FCR C +M + G CPLCR + R C ++
Sbjct: 14 DDFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGSVTRRERACPERAI 73
Query: 233 TLNSIIQK 240
L +I+++
Sbjct: 74 DLENIMRR 81
>UNIPROTKB|H3BPQ8 [details] [associations]
symbol:BFAR "Bifunctional apoptosis regulator" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HGNC:HGNC:17613 EMBL:AC009167
ProteinModelPortal:H3BPQ8 SMR:H3BPQ8 Ensembl:ENST00000563313
Bgee:H3BPQ8 Uniprot:H3BPQ8
Length = 89
Score = 109 (43.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCL--FQSMDRGNKCPLCR 218
+F C C +L P T CGHSFCR CL + + + +CP CR
Sbjct: 31 EFSCHCCYDILVNPTTLNCGHSFCRHCLALWWASSKKTECPECR 74
>UNIPROTKB|H3BUB3 [details] [associations]
symbol:BFAR "Bifunctional apoptosis regulator" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HGNC:HGNC:17613 EMBL:AC009167
ProteinModelPortal:H3BUB3 SMR:H3BUB3 Ensembl:ENST00000566710
Bgee:H3BUB3 Uniprot:H3BUB3
Length = 141
Score = 109 (43.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCL--FQSMDRGNKCPLCR 218
+F C C +L P T CGHSFCR CL + + + +CP CR
Sbjct: 31 EFSCHCCYDILVNPTTLNCGHSFCRHCLALWWASSKKTECPECR 74
>UNIPROTKB|E1C3U5 [details] [associations]
symbol:BFAR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] InterPro:IPR001841
InterPro:IPR001660 PROSITE:PS50089 PROSITE:PS50105 SMART:SM00184
SMART:SM00454 Prosite:PS00518 GO:GO:0016020 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 InterPro:IPR017907 CTD:51283 KO:K15684
OMA:FEDIQQN GeneTree:ENSGT00390000005386 EMBL:AADN02023913
IPI:IPI00579720 RefSeq:XP_414737.2 Ensembl:ENSGALT00000004911
GeneID:416424 KEGG:gga:416424 Uniprot:E1C3U5
Length = 449
Score = 131 (51.2 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 31/90 (34%), Positives = 45/90 (50%)
Query: 165 GRRIHGTPERTDDFDCTLCLKLLYEPITTPCGHSFCRSCL--FQSMDRGNKCPLCRAVLF 222
GRR+ +F C C +L P T CGHSFCR CL + + N+CP CR
Sbjct: 25 GRRVS-----VSEFLCHCCYDILVNPTTLNCGHSFCRHCLALWWVSSKKNECPECREKWE 79
Query: 223 ITPRTCAVSVTLNSIIQKNFPEEYAERKSE 252
PR V++ L +I++ F + +RK +
Sbjct: 80 GFPR---VNILLRDVIERLFSDAIEQRKED 106
>UNIPROTKB|Q66J69 [details] [associations]
symbol:rnf2-a "E3 ubiquitin-protein ligase RING2-A"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS] [GO:0071339
"MLL1 complex" evidence=ISS] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102
HOVERGEN:HBG079942 KO:K10695 EMBL:BC081039 RefSeq:NP_001087647.1
UniGene:Xl.6549 ProteinModelPortal:Q66J69 SMR:Q66J69 GeneID:447471
KEGG:xla:447471 CTD:447471 Xenbase:XB-GENE-6253865 Uniprot:Q66J69
Length = 344
Score = 129 (50.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 35/108 (32%), Positives = 52/108 (48%)
Query: 146 SNPLQASLQNLERTTASLI--GRRIHGTPERT-DDFDCTLCLKLLYEPITTP-CGHSFCR 201
S + SL L RT I G I +P + C +CL +L +TT C H FC
Sbjct: 11 SKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCS 70
Query: 202 SCLFQSMDRGNK-CPLCRAVLFITPRTCAVSVTLNSIIQKNFP--EEY 246
C+ ++ GNK CP CR L ++ R+ +++I K +P +EY
Sbjct: 71 DCIVTALRSGNKECPTCRKKL-VSKRSLRPDPNFDALISKIYPSRDEY 117
>ZFIN|ZDB-GENE-030616-180 [details] [associations]
symbol:si:busm1-163l24.4 "si:busm1-163l24.4"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-030616-180 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
eggNOG:KOG2177 EMBL:AL591669 IPI:IPI00501631 RefSeq:NP_001005315.1
UniGene:Dr.114263 ProteinModelPortal:Q8AW62 STRING:Q8AW62
GeneID:368754 KEGG:dre:368754 InParanoid:Q8AW62 NextBio:20813157
Uniprot:Q8AW62
Length = 278
Score = 127 (49.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 27/76 (35%), Positives = 38/76 (50%)
Query: 173 ERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQ------SMDRGNKCPLCRAVLFITPR 226
E D F C +CL L +P+T PCGH++C SC+ S D G CP CR +PR
Sbjct: 7 EDLDPFTCPICLDALKDPVTIPCGHNYCMSCIKHYWEKNGSRDTGYTCPECRKTF--SPR 64
Query: 227 TCAVSVTLNSIIQKNF 242
T+ + + + F
Sbjct: 65 PALNKNTMFAEVVERF 80
>POMBASE|SPAC6B12.07c [details] [associations]
symbol:SPAC6B12.07c "ubiquitin-protein ligase E3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISM] [GO:0005829
"cytosol" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=ISM]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
PomBase:SPAC6B12.07c Prosite:PS00518 GO:GO:0005829 EMBL:CU329670
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 InterPro:IPR004331 Pfam:PF03105
PROSITE:PS51382 eggNOG:COG5574 PIR:T39014 RefSeq:NP_593762.2
EnsemblFungi:SPAC6B12.07c.1 GeneID:2543315 OrthoDB:EOG4SFDFM
NextBio:20804332 Uniprot:O14212
Length = 470
Score = 131 (51.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 28/111 (25%), Positives = 52/111 (46%)
Query: 146 SNPLQASLQNLERTTASLIGRRIHGTPERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLF 205
S+PL + N + + ++ + DF+C +C + Y+P+ C H FC CL
Sbjct: 341 SDPLLL-VDNASKAICFSLSSKLFSIIPQLRDFECAICSNVAYKPVRLGCSHVFCLHCLI 399
Query: 206 -QSMDRGNKCPLCRAVLFITPRTCAVSVTLNSIIQKNFPEEYAERKSEHDS 255
+ + CPLCRA + + + L + ++ FP E E+ E+++
Sbjct: 400 ILQKQKVDFCPLCRAKEVMKADSRNIDHALMNFMKTYFPREIKEKFEENEN 450
>FB|FBgn0032660 [details] [associations]
symbol:elfless "elfless" species:7227 "Drosophila
melanogaster" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0005634
EMBL:AE014134 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000010318
FlyBase:FBgn0032660 EMBL:BT072897 RefSeq:NP_001163003.1
RefSeq:NP_609860.2 UniGene:Dm.19846 SMR:Q9VJB0 IntAct:Q9VJB0
MINT:MINT-797819 STRING:Q9VJB0 EnsemblMetazoa:FBtr0302030
EnsemblMetazoa:FBtr0302031 GeneID:35076 KEGG:dme:Dmel_CG15150
UCSC:CG15150-RA CTD:35076 eggNOG:NOG319336 InParanoid:Q9VJB0
OrthoDB:EOG4FXPR8 GenomeRNAi:35076 NextBio:791733 Uniprot:Q9VJB0
Length = 229
Score = 118 (46.6 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 18/42 (42%), Positives = 31/42 (73%)
Query: 178 FDCTLCLKLLYE--PITTPCGHSFCRSCLFQSMDRGNKCPLC 217
++C +CL+ + E P++T CGH FC++C+ +++D G CPLC
Sbjct: 176 YNCPVCLEDVREKLPVSTNCGHVFCKACIKRAVDTGRVCPLC 217
Score = 44 (20.5 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 11/48 (22%), Positives = 21/48 (43%)
Query: 7 ANEGEGSLPWDRYTHVFDLVQKGNRAFRESNFEEAIS----NYSRANN 50
+++ + S W++ T V L NR+ S + N+ +NN
Sbjct: 4 SSDSDSSTEWEQNTRVISLPFSRNRSHLSSRLSYLVGLQMENFRTSNN 51
>UNIPROTKB|A2AE50 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL662832
EMBL:AL844220 EMBL:BX927221 EMBL:CR759838 EMBL:CR788282
EMBL:BX248419 EMBL:CR388382 EMBL:BX927189 HGNC:HGNC:12962
EMBL:AL662782 EMBL:AL671855 EMBL:AL845450 IPI:IPI00642517
SMR:A2AE50 Ensembl:ENST00000427612 Ensembl:ENST00000429583
Ensembl:ENST00000431641 Ensembl:ENST00000434785
Ensembl:ENST00000435387 Ensembl:ENST00000440149
Ensembl:ENST00000445457 Ensembl:ENST00000447942
HOGENOM:HOG000060139 HOVERGEN:HBG084408 Uniprot:A2AE50
Length = 122
Score = 108 (43.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMD-RGNK--CPLCR 218
++ C++CL L +P+T CGH FCRSC G++ CPLC+
Sbjct: 12 EEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCK 57
>RGD|1303115 [details] [associations]
symbol:Trim39 "tripartite motif-containing 39" species:10116
"Rattus norvegicus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=ISO] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
UniPathway:UPA00143 Pfam:PF00097 RGD:1303115 Prosite:PS00518
GO:GO:0005829 GO:GO:0005739 GO:GO:0006915 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0016567 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HOGENOM:HOG000234133
HOVERGEN:HBG001357 GeneTree:ENSGT00700000104307 CTD:56658
eggNOG:NOG238084 KO:K12015 OrthoDB:EOG480HWD EMBL:BX883050
IPI:IPI00417367 RefSeq:NP_998727.1 UniGene:Rn.229996
ProteinModelPortal:Q6MFZ5 SMR:Q6MFZ5 STRING:Q6MFZ5
Ensembl:ENSRNOT00000001021 GeneID:309591 KEGG:rno:309591
UCSC:RGD:1303115 InParanoid:Q6MFZ5 NextBio:661022
ArrayExpress:Q6MFZ5 Genevestigator:Q6MFZ5
GermOnline:ENSRNOG00000000785 Uniprot:Q6MFZ5
Length = 488
Score = 131 (51.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 53/213 (24%), Positives = 97/213 (45%)
Query: 180 CTLCLKLLYEPITTPCGHSFCRSCL---FQSMDRGNKCPLCRAVLFITPRTCAVSVTLNS 236
C++CL+ L EP+ CGH+FC++C+ ++ ++R CP+CR R+ + L S
Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRY--RSLRPNRQLGS 86
Query: 237 IIQKNFPEEYAERKSEHDSLINFGVDLMPLFVMD----VVIPCQRFPLHIFEPRYRLMVR 292
+++ + +RK +SL + + + LF + V + C H M
Sbjct: 87 MVEIAKQLQTVKRKIRDESLCSQHHEPLSLFCYEDQEAVCLICAISHTHRAHTVVP-MDD 145
Query: 293 RIMEGNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESRRRFRILRSWDQD 352
E ++ ++P + + C E +P G +ESRR+ +IL+ +++
Sbjct: 146 ATQEYKEKL-QKCLEPLEQKLQEITCCKASEERKP---GELKRLVESRRQ-QILKEFEEL 200
Query: 353 GYRVAEIEWVQDIHPEGVEDRAD-LQDLTNNAA 384
R+ E + Q + E+ D LQ L NAA
Sbjct: 201 HRRLDEEQ--QTLLSRLEEEEQDILQRLRENAA 231
>UNIPROTKB|C9JE08 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC024221 HGNC:HGNC:30834 HOGENOM:HOG000199013 IPI:IPI00947483
ProteinModelPortal:C9JE08 SMR:C9JE08 STRING:C9JE08
Ensembl:ENST00000471396 ArrayExpress:C9JE08 Bgee:C9JE08
Uniprot:C9JE08
Length = 155
Score = 112 (44.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 26/88 (29%), Positives = 43/88 (48%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDR-GN-----------KCPLCRAVLFI 223
++ C +C + +P PC H+FCR+CL + GN KCP CR++ I
Sbjct: 6 EELTCPICYSIFEDPRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCRSITEI 65
Query: 224 TP---RTCAVSVTLNSIIQKNFPEEYAE 248
P + V+ L +II+K E++ +
Sbjct: 66 APTGIESLPVNFALRAIIEKYQQEDHPD 93
>UNIPROTKB|F1STP4 [details] [associations]
symbol:F1STP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00670000097491
EMBL:FP102422 Ensembl:ENSSSCT00000016288 OMA:NDSWARE Uniprot:F1STP4
Length = 450
Score = 130 (50.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLF---QSMDRGNKCPLCRAV 220
D+ C++C+ +P+TT CGHSFCR CL+ + CP CRAV
Sbjct: 11 DELKCSICMNYFIDPVTTDCGHSFCRPCLYLCWEEEQAPKSCPECRAV 58
>UNIPROTKB|F1STP5 [details] [associations]
symbol:LOC100623551 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407
GeneTree:ENSGT00670000097491 OMA:RYQKMHI EMBL:FP565680
Ensembl:ENSSSCT00000016287 Uniprot:F1STP5
Length = 451
Score = 130 (50.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLF---QSMDRGNKCPLCRAV 220
D+ C++C+ +P+TT CGHSFCR CL+ + CP CRAV
Sbjct: 12 DELKCSICMNYFIDPVTTDCGHSFCRPCLYLCWEEEQAPKSCPECRAV 59
>UNIPROTKB|Q28DL4 [details] [associations]
symbol:traf6 "TNF receptor-associated factor 6"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0070534
"protein K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 GO:GO:0007165 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GO:GO:0070534 SUPFAM:SSF49599
CTD:7189 eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248
KO:K03175 PANTHER:PTHR10131:SF48 EMBL:CR855449 EMBL:BC082342
RefSeq:NP_001008162.2 UniGene:Str.8271 ProteinModelPortal:Q28DL4
SMR:Q28DL4 STRING:Q28DL4 GeneID:493524 KEGG:xtr:493524
Xenbase:XB-GENE-480628 InParanoid:Q641J5 Uniprot:Q28DL4
Length = 558
Score = 131 (51.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 165 GRRIHGTPERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSM-DRGNKCPL 216
G + P ++C +CL L E + TPCGH FC++C+ +S+ D G+KCP+
Sbjct: 57 GYDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACILKSIRDAGHKCPV 109
>ZFIN|ZDB-GENE-060519-46 [details] [associations]
symbol:zgc:136302 "zgc:136302" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-060519-46 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG106862 EMBL:BC097227 IPI:IPI00995388 UniGene:Dr.83099
ProteinModelPortal:Q4V8S4 Uniprot:Q4V8S4
Length = 563
Score = 131 (51.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 31/81 (38%), Positives = 40/81 (49%)
Query: 178 FDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGN-----KCPLCRAVLFITPRTCAVSV 232
F+C +CL LL P+TT CGHSFC CL + DR CP CR TPR
Sbjct: 11 FNCPICLHLLNNPVTTYCGHSFCMDCLNEFWDRDTLKGVYSCPQCRQTF--TPRPALSKN 68
Query: 233 TLNSIIQKNFPEEYAERKSEH 253
T+ + + + E E K+ H
Sbjct: 69 TVIAEVVERMKIETPE-KATH 88
>UNIPROTKB|A2AAZ6 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000234133 HOVERGEN:HBG001357
EMBL:AL662832 EMBL:AL662795 EMBL:AL773535 EMBL:BX294158
EMBL:CR759928 EMBL:BX927214 EMBL:CR759281 EMBL:BX248580
HGNC:HGNC:10065 IPI:IPI00643713 SMR:A2AAZ6 Ensembl:ENST00000428728
Ensembl:ENST00000431871 Ensembl:ENST00000440130
Ensembl:ENST00000442914 Ensembl:ENST00000447077
Ensembl:ENST00000449396 Ensembl:ENST00000450421 Uniprot:A2AAZ6
Length = 261
Score = 125 (49.1 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 56/215 (26%), Positives = 96/215 (44%)
Query: 180 CTLCLKLLYEPITTPCGHSFCRSCL---FQSMDRGNKCPLCRAVLFITPRTCAVSVTLNS 236
C++CL+ L EP+ CGH+FC++C+ ++ ++R CP+CR R+ + L S
Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRY--RSLRPNRQLGS 86
Query: 237 IIQKNFPEEYAERKSEHDSLINFGVDLMPLFVMD----VVIPCQRFPLHIFEPRYRLMVR 292
+++ + +RK +SL + + LF + V + C H L
Sbjct: 87 MVEIAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPLD-D 145
Query: 293 RIMEGNHRMGMVIIDPTTGSVADFACEVEITEC---EPLPDGRFVLEIESRRRFRILRSW 349
E ++ ++P + EIT C E G +ESRR+ +ILR +
Sbjct: 146 ATQEYKEKL-QKCLEPLEQKLQ------EITRCKSSEEKKPGELKRLVESRRQ-QILREF 197
Query: 350 DQDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAA 384
++ R+ E + V E E++ LQ L NAA
Sbjct: 198 EELHRRLDEEQQVLLSRLEE-EEQDILQRLRENAA 231
>UNIPROTKB|F1RKW3 [details] [associations]
symbol:RNF135 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045088 "regulation of innate immune response"
evidence=IEA] [GO:0043021 "ribonucleoprotein complex binding"
evidence=IEA] [GO:0032728 "positive regulation of interferon-beta
production" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0043021 InterPro:IPR017907
GO:GO:0045088 InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 GO:GO:0032728
KO:K16272 OMA:WLYGLHP GeneTree:ENSGT00650000093365 EMBL:CU640398
RefSeq:XP_003131783.1 UniGene:Ssc.10766 Ensembl:ENSSSCT00000019304
GeneID:100522211 KEGG:ssc:100522211 Uniprot:F1RKW3
Length = 423
Score = 129 (50.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 23/45 (51%), Positives = 27/45 (60%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNK--CPLCR 218
DD C +C +LL P T PCGHSFCR CL + G + CP CR
Sbjct: 17 DDLGCIICHELLAWPTTLPCGHSFCRDCLVGLWEAGRRRSCPTCR 61
>FB|FBgn0003330 [details] [associations]
symbol:Sce "Sex combs extra" species:7227 "Drosophila
melanogaster" [GO:0045498 "sex comb development" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IDA]
[GO:0006342 "chromatin silencing" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IMP]
[GO:0008278 "cohesin complex" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0030713 "ovarian follicle cell stalk
formation" evidence=IMP] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0035102 "PRC1
complex" evidence=TAS] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IMP] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 EMBL:AE014297
GO:GO:0007126 GO:GO:0005730 GO:GO:0022008 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006342 InterPro:IPR017907 GO:GO:0030713
GO:GO:0045498 GO:GO:0035518 GO:GO:0035102 GO:GO:0030708
GO:GO:0008278 GO:GO:0007062 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 KO:K10695 EMBL:AJ001514 EMBL:AY058535
RefSeq:NP_477509.1 UniGene:Dm.4170 ProteinModelPortal:Q9VB08
SMR:Q9VB08 DIP:DIP-21764N IntAct:Q9VB08 MINT:MINT-860974
STRING:Q9VB08 PaxDb:Q9VB08 PRIDE:Q9VB08 EnsemblMetazoa:FBtr0085245
GeneID:43327 KEGG:dme:Dmel_CG5595 CTD:43327 FlyBase:FBgn0003330
InParanoid:Q9VB08 OMA:MELYFAP OrthoDB:EOG489332 PhylomeDB:Q9VB08
GenomeRNAi:43327 NextBio:833362 Bgee:Q9VB08 GermOnline:CG5595
Uniprot:Q9VB08
Length = 435
Score = 129 (50.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 36/113 (31%), Positives = 55/113 (48%)
Query: 142 VDPFSNPL-QASLQNLERTTASLI--GRRIHGTPERT-DDFDCTLCLKLLYEPITTP-CG 196
+DP N + SL L+R +I I +P + C +CL +L + +TT C
Sbjct: 4 LDPAPNKTWELSLYELQRKPQEVITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECL 63
Query: 197 HSFCRSCLFQSMDRGNK-CPLCRAVLFITPRTCAVSVTLNSIIQKNFP--EEY 246
H FC C+ ++ GNK CP CR L ++ R+ + +I K +P EEY
Sbjct: 64 HRFCSDCIVTALRSGNKECPTCRKKL-VSKRSLRADPNFDLLISKIYPSREEY 115
>TAIR|locus:2016437 [details] [associations]
symbol:AT1G19310 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HSSP:P38398 EMBL:AC025808 HOGENOM:HOG000238304
KO:K10666 eggNOG:NOG300581 EMBL:AY057705 EMBL:AY116959
EMBL:AY085230 IPI:IPI00544945 PIR:E86326 RefSeq:NP_564078.1
UniGene:At.16708 ProteinModelPortal:Q9LN67 SMR:Q9LN67 IntAct:Q9LN67
EnsemblPlants:AT1G19310.1 GeneID:838513 KEGG:ath:AT1G19310
TAIR:At1g19310 InParanoid:Q9LN67 OMA:NANPWFM PhylomeDB:Q9LN67
ProtClustDB:CLSN2917022 Genevestigator:Q9LN67 Uniprot:Q9LN67
Length = 226
Score = 123 (48.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 175 TDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSM---DRGNKCPLCRAVL 221
+ +F+C +CL L +PI T CGH FC CL++ + + CP+C+AV+
Sbjct: 18 SSNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHSQSKDCPVCKAVI 67
>UNIPROTKB|Q32LN5 [details] [associations]
symbol:RNF138 "E3 ubiquitin-protein ligase RNF138"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0016055 "Wnt
receptor signaling pathway" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184
SMART:SM00355 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016055
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946
HOVERGEN:HBG074331 EMBL:BC109497 IPI:IPI00709714
RefSeq:NP_001033263.1 UniGene:Bt.45000 ProteinModelPortal:Q32LN5
PRIDE:Q32LN5 Ensembl:ENSBTAT00000026851 GeneID:538445
KEGG:bta:538445 CTD:51444 eggNOG:NOG44750 InParanoid:Q32LN5
KO:K10668 OMA:EANFTRQ OrthoDB:EOG4J9N0K NextBio:20877365
Uniprot:Q32LN5
Length = 245
Score = 124 (48.7 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 26/68 (38%), Positives = 38/68 (55%)
Query: 176 DDFDCTLCLKLLYEPI-TTPCGHSFCRSCLFQSM-DRGNKCPLCRAVLFITPRTCAV-SV 232
DDF C +C ++L P+ T C H FCR C +M + G CPLCR + R C ++
Sbjct: 14 DDFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGNVTRRERACPERAL 73
Query: 233 TLNSIIQK 240
L +I++K
Sbjct: 74 DLENIMRK 81
>UNIPROTKB|F1SAL6 [details] [associations]
symbol:RNF138 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR015880
PROSITE:PS50089 SMART:SM00184 SMART:SM00355 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000063064 KO:K10668 OMA:EANFTRQ EMBL:CU467523
EMBL:CU019565 RefSeq:XP_003127930.1 UniGene:Ssc.63848
Ensembl:ENSSSCT00000004130 GeneID:100515956 KEGG:ssc:100515956
Uniprot:F1SAL6
Length = 245
Score = 124 (48.7 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 26/68 (38%), Positives = 38/68 (55%)
Query: 176 DDFDCTLCLKLLYEPI-TTPCGHSFCRSCLFQSM-DRGNKCPLCRAVLFITPRTCAV-SV 232
DDF C +C ++L P+ T C H FCR C +M + G CPLCR + R C ++
Sbjct: 14 DDFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGNVTRRERACPERAL 73
Query: 233 TLNSIIQK 240
L +I++K
Sbjct: 74 DLENIMRK 81
>ZFIN|ZDB-GENE-080218-19 [details] [associations]
symbol:ftr46 "finTRIM family, member 46"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-080218-19
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00670000097622
EMBL:CABZ01034857 IPI:IPI00935014 Ensembl:ENSDART00000101232
Uniprot:F1Q9G0
Length = 390
Score = 132 (51.5 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 28/71 (39%), Positives = 40/71 (56%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLF-----QSMDRGNKCPLCRAVLFITPRTC-A 229
+ F C +CL LL +P+T PCGHS+C SC+ + R CPLC+ TPR A
Sbjct: 11 NQFMCPVCLDLLQDPVTIPCGHSYCMSCITDCWNQEEQKRIYSCPLCKQSF--TPRPALA 68
Query: 230 VSVTLNSIIQK 240
+V L +++K
Sbjct: 69 KNVVLAEMLEK 79
Score = 37 (18.1 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 19/83 (22%), Positives = 36/83 (43%)
Query: 335 LEIESRRRFRILRSWDQDGYRVAEIEWVQDIHPEG----VEDRADL-----QDLTNNAAE 385
LE R I++ ++D + ++ DIH VED + QD+ +E
Sbjct: 200 LEENQRNLLIIIQKREED---LQQLRDAVDIHKRSAQSAVEDSERIFTELIQDIEKRRSE 256
Query: 386 YARLWLRREKESARQDRRRLEKL 408
+L +E+ + + +LE+L
Sbjct: 257 VNQLIRDQERAAVSRAEEQLERL 279
>ZFIN|ZDB-GENE-041001-120 [details] [associations]
symbol:ftr78 "finTRIM family, member 78"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-041001-120 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:BX248515 GeneTree:ENSGT00670000097622 IPI:IPI00861910
Ensembl:ENSDART00000103261 Uniprot:F1QPS0
Length = 618
Score = 131 (51.2 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNK----CPLCR 218
D + C++CL LL +P+T PCGHS+C SC+ + ++ K CP CR
Sbjct: 9 DQYSCSVCLDLLRDPVTIPCGHSYCMSCINECWNKDQKAPYKCPQCR 55
>UNIPROTKB|H7C3H8 [details] [associations]
symbol:RNF135 "E3 ubiquitin-protein ligase RNF135"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC138207 HGNC:HGNC:21158 ChiTaRS:RNF135
ProteinModelPortal:H7C3H8 Ensembl:ENST00000443677 Bgee:H7C3H8
Uniprot:H7C3H8
Length = 162
Score = 114 (45.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 24/47 (51%), Positives = 27/47 (57%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCL---FQSMD-RGNKCPLCR 218
DD C +C LL P T PCGHSFCR CL + + D R CP CR
Sbjct: 17 DDLGCIICQGLLDWPATLPCGHSFCRHCLEALWGARDARRWACPTCR 63
>UNIPROTKB|Q495X7 [details] [associations]
symbol:TRIM60 "Tripartite motif-containing protein 60"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HSSP:Q9CQJ4 HOGENOM:HOG000234133
HOVERGEN:HBG001357 EMBL:AK093201 EMBL:BC100983 EMBL:BC100984
EMBL:BC100985 EMBL:BC100986 IPI:IPI00167899 RefSeq:NP_001244954.1
RefSeq:NP_689833.1 UniGene:Hs.368004 ProteinModelPortal:Q495X7
SMR:Q495X7 STRING:Q495X7 PhosphoSite:Q495X7 DMDM:114154820
PaxDb:Q495X7 PRIDE:Q495X7 Ensembl:ENST00000341062
Ensembl:ENST00000508504 Ensembl:ENST00000512596 GeneID:166655
KEGG:hsa:166655 UCSC:uc003iqy.1 CTD:166655 GeneCards:GC04P165953
HGNC:HGNC:21162 HPA:HPA035810 neXtProt:NX_Q495X7
PharmGKB:PA134909634 eggNOG:NOG253525 InParanoid:Q495X7 KO:K12029
OMA:VSWKDLD OrthoDB:EOG4NP73C PhylomeDB:Q495X7 GenomeRNAi:166655
NextBio:88609 ArrayExpress:Q495X7 Bgee:Q495X7 CleanEx:HS_TRIM60
Genevestigator:Q495X7 Uniprot:Q495X7
Length = 471
Score = 129 (50.5 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 67/271 (24%), Positives = 119/271 (43%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCL---FQSMDRGNKCPLCRAVLFITP-RTCAVS 231
++ C +CL+ L +P+T CGH+FCRSCL ++ +D CP+CR F P ++ +
Sbjct: 12 EESSCPICLEYLKDPVTINCGHNFCRSCLSVSWKDLDDTFPCPVCR---FCFPYKSFRRN 68
Query: 232 VTLNSI--IQKNFPEEYAERKSEHDS-LINFGVDLMPLF-VMDVVIPCQRFPLHIFEPRY 287
L ++ I K ++RK + ++ + + LF V D+ I C + ++
Sbjct: 69 PQLRNLTEIAKQLQIRRSKRKRQKENAMCEKHNQFLTLFCVKDLEILCTQCSFSTKHQKH 128
Query: 288 RLMVRRIMEGNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESR---RRFR 344
+ + HR I++ GS+ +E E + G +E++ + +R
Sbjct: 129 YICPIKKAASYHRE---ILE---GSLEPLRNNIERVEKVIILQGSKSVELKKKVEYKREE 182
Query: 345 ILRSWDQDG-YRVAEIEWV-QDIHPEGVEDRADLQDLTNNAAEYARLW--LRREKESARQ 400
I ++Q + E E + + I E + A L + ++Y L RE E +
Sbjct: 183 INSEFEQIRLFLQNEQEMILRQIQDEEMNILAKLNENLVELSDYVSTLKHLLREVEG-KS 241
Query: 401 DRRRLEKLLNVEVMMPPSQD---PERFSFWL 428
+ LE L + M Q+ PE FSF L
Sbjct: 242 VQSNLELLTQAKSMHHKYQNLKCPELFSFRL 272
>ZFIN|ZDB-GENE-070705-378 [details] [associations]
symbol:btr26 "bloodthirsty-related gene family,
member 26" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070705-378 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
EMBL:CR853286 GeneTree:ENSGT00660000095328 EMBL:CU861574
IPI:IPI00972564 Ensembl:ENSDART00000007454 Bgee:E7F4Z1
Uniprot:E7F4Z1
Length = 559
Score = 130 (50.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 24/80 (30%), Positives = 44/80 (55%)
Query: 175 TDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGN--KCPLCRAVLFITPRTCAVSV 232
++D C++CL + +P++TPCGH+FC+ CL + + CP C+ P ++
Sbjct: 33 SEDLRCSICLDVFTDPVSTPCGHNFCKICLNKCWNNSQTCSCPYCKETFRQRP-DLKINT 91
Query: 233 TLNSIIQKNFPEEYAERKSE 252
TL I +++ E+ K+E
Sbjct: 92 TLREI-SEHYKEKRPGEKAE 110
>UNIPROTKB|F1NCS0 [details] [associations]
symbol:F1NCS0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00390000017123 EMBL:AADN02012507
EMBL:AADN02012506 IPI:IPI00822105 Ensembl:ENSGALT00000038028
OMA:GEMALRS Uniprot:F1NCS0
Length = 138
Score = 106 (42.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 21/52 (40%), Positives = 25/52 (48%)
Query: 172 PERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNK-----CPLCR 218
P DF C +CL+ + P+ T CGH FC SCL CPLCR
Sbjct: 11 PSNHSDFSCPICLQTVTLPVETNCGHLFCGSCLITYWKHSPWLGAIICPLCR 62
>ZFIN|ZDB-GENE-041114-86 [details] [associations]
symbol:ftr72 "finTRIM family, member 72"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-041114-86 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HOGENOM:HOG000234136
HOVERGEN:HBG106862 EMBL:BC085564 IPI:IPI00866697 UniGene:Dr.118348
ProteinModelPortal:Q5U3F5 eggNOG:NOG326605 InParanoid:Q5U3F5
OrthoDB:EOG4K6G6B NextBio:20865075 Uniprot:Q5U3F5
Length = 550
Score = 129 (50.5 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCL---FQSMDRGN--KCPLCR 218
D F C +CL LL EP+T PCGHS+C SC+ + ++G +CP CR
Sbjct: 11 DQFSCPVCLDLLKEPVTIPCGHSYCMSCITDCWSLKEQGPPYRCPQCR 58
Score = 44 (20.5 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 31/153 (20%), Positives = 66/153 (43%)
Query: 268 VMDVVIPCQRFPLHIF-EPRYRLMVRRIMEGNHRMGMVI-IDPTTGSVADFACEVEITEC 325
+ + + P PL I+ + ++ + M +H+ V+ +D S E+++T C
Sbjct: 144 IQENICPSHGRPLEIYCQDDHQCICYLCMVDSHKTHSVVSVDSEWTSKKRVLEEMKLT-C 202
Query: 326 EPLPDGRFVLEIESRRRFRILRSWDQDGY-RVAEI--EWVQDIHPEGVEDRADL--QDLT 380
L R + + R + L+S ++ R+ ++ E + + + E + + Q+ T
Sbjct: 203 VKLIKEREKGQRQLRTATKHLKSSAEEAVERMEKVFTELICSLEKKRSEIKEQIRAQEKT 262
Query: 381 N-NAAEYARLWLRREKESARQDRRRLEKLLNVE 412
+ AE L +E R+ + + KLL E
Sbjct: 263 ETDRAEQLHQHLHQELTQLRKTQAEIHKLLTTE 295
>UNIPROTKB|F1Q125 [details] [associations]
symbol:TRIM68 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104307 OMA:MQKLEQN EMBL:AAEX03012846
Ensembl:ENSCAFT00000009822 Uniprot:F1Q125
Length = 438
Score = 128 (50.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 26/72 (36%), Positives = 40/72 (55%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLF-------QSMDRGNKCPLCRAVLFITPRTC 228
++ C +C+ L EP++ CGHSFC SCL +S + G CPLCRA + PR
Sbjct: 12 EEVACPICMTFLREPVSIDCGHSFCHSCLSGLWEVPGESQNWGYTCPLCRAP--VQPRNL 69
Query: 229 AVSVTLNSIIQK 240
+ L ++++K
Sbjct: 70 RPNWQLANVVEK 81
>ZFIN|ZDB-GENE-090507-8 [details] [associations]
symbol:ftr43 "finTRIM family, member 43" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-090507-8 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 OrthoDB:EOG4R23TJ HOGENOM:HOG000234136
HOVERGEN:HBG106862 eggNOG:NOG319664 EMBL:BC095315 IPI:IPI00510507
RefSeq:NP_001019821.1 UniGene:Dr.114072 ProteinModelPortal:Q503I6
GeneID:553628 KEGG:dre:553628 CTD:553628 InParanoid:Q503I6
NextBio:20880365 Uniprot:Q503I6
Length = 440
Score = 128 (50.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLF-----QSMDRGNKCPLCRAVLFITPRTC-A 229
D F C +CL LL +P+T CGHS+C SC+ + + R CPLC+ TPR A
Sbjct: 11 DQFMCPVCLNLLQDPVTIACGHSYCMSCITDCWNQEELKRIYSCPLCKQSF--TPRPALA 68
Query: 230 VSVTLNSIIQK 240
+V +++K
Sbjct: 69 KNVVFAEMLEK 79
>UNIPROTKB|H0YGS7 [details] [associations]
symbol:TRIM65 "Tripartite motif-containing protein 65"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC087289 HGNC:HGNC:27316
Ensembl:ENST00000540128 Uniprot:H0YGS7
Length = 244
Score = 123 (48.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 180 CTLCLKLLYEPITTPCGHSFCRSCLFQSMDR-GNKCPLCR 218
C +CL L +P+T PCGH+FC +C+ DR G CP CR
Sbjct: 4 CAICLGLYQDPVTLPCGHNFCGACIRDWWDRCGKACPECR 43
>UNIPROTKB|K7GR70 [details] [associations]
symbol:LOC100737114 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000742 PROSITE:PS50089 SMART:SM00181
SMART:SM00184 Prosite:PS00518 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104271 EMBL:FP245413
Ensembl:ENSSSCT00000035478 Uniprot:K7GR70
Length = 242
Score = 109 (43.4 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 27/83 (32%), Positives = 45/83 (54%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMD-RGNK--CPLCRAVLFITPRTCAVSV 232
++ C++CL+ P+TTPCGH+FC CL ++ +G CP CR P+ +V
Sbjct: 9 EELSCSICLEPFKVPVTTPCGHNFCGLCLDETWAVQGPPYLCPQCRTGYETRPQLRKNTV 68
Query: 233 TLNSIIQKNFPEEYAERKSEHDS 255
L +++++ E A R + DS
Sbjct: 69 -LCAVVEQFLQAEQA-RPAVLDS 89
Score = 53 (23.7 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 16/71 (22%), Positives = 30/71 (42%)
Query: 281 HIFEPRYRLMVRRIMEGNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESR 340
H +P R ++RR ++R+ P C VE C P P + ++E++
Sbjct: 145 HPLQPPVRDLMRRKCPQHNRLRDFFC-PEHSECICHVCLVEHKTCSPAPLSQASTDLENK 203
Query: 341 RRFRILRSWDQ 351
R ++ + Q
Sbjct: 204 LRHKLTIMYSQ 214
>ZFIN|ZDB-GENE-070912-323 [details] [associations]
symbol:ftr25 "finTRIM family, member 25"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070912-323 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00670000097622 EMBL:BX548047 IPI:IPI00507459
Ensembl:ENSDART00000098047 Uniprot:F1Q5U7
Length = 553
Score = 129 (50.5 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNK-----CPLCRAVLFITPRTCA- 229
+ F C++CL LL EP+T PCGHS+C +C+ ++ + CP CR TPR
Sbjct: 11 NQFSCSVCLGLLKEPVTIPCGHSYCMNCITDCWNQDEQRRVYSCPQCRQTF--TPRPALN 68
Query: 230 VSVTLNSIIQK 240
+V I++K
Sbjct: 69 KNVVFAEIVEK 79
>ZFIN|ZDB-GENE-070912-316 [details] [associations]
symbol:ftr26 "finTRIM family, member 26"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-070912-316 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
OrthoDB:EOG4R23TJ GeneTree:ENSGT00670000097622 HOVERGEN:HBG106862
EMBL:BX548047 IPI:IPI00960567 UniGene:Dr.89140
Ensembl:ENSDART00000140555 eggNOG:NOG283028 Uniprot:B0S6S0
Length = 358
Score = 126 (49.4 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 25/56 (44%), Positives = 31/56 (55%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQ--SMDRGNK---CPLCRAVLFITPR 226
D F C++C LL EP+T PCGHS+C C+ S D + CP CR TPR
Sbjct: 11 DQFSCSICKDLLREPVTIPCGHSYCMICITDCWSQDEQRRVYSCPQCRQTF--TPR 64
>ZFIN|ZDB-GENE-090508-13 [details] [associations]
symbol:ftr73 "finTRIM family, member 73"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-090508-13 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00670000097622
EMBL:CR853294 IPI:IPI00770279 Ensembl:ENSDART00000147469
Uniprot:E9QBF8
Length = 562
Score = 132 (51.5 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 173 ERTDDFDCTLCLKLLYEPITTPCGHSFCRSCL---FQSMDRGN--KCPLCR 218
E D F C +CL LL EP+T PCGHS+C SC+ + ++G +CP CR
Sbjct: 8 EYVDQFSCPVCLDLLKEPVTIPCGHSYCMSCITDCWSLKEQGPPYRCPQCR 58
Score = 40 (19.1 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 11/44 (25%), Positives = 22/44 (50%)
Query: 370 VEDRADLQDLTN-NAAEYARLWLRREKESARQDRRRLEKLLNVE 412
++++ Q+ T + AE L +E R+ + ++KLL E
Sbjct: 249 IKEQIRAQEKTETDRAEQLHQHLHQELTQLRKTQAEIDKLLTTE 292
>RGD|1309302 [details] [associations]
symbol:Rnf151 "ring finger protein 151" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR008974 InterPro:IPR013010
InterPro:IPR013323 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS51081 SMART:SM00184 RGD:1309302 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 EMBL:CH473948 InterPro:IPR017907
SUPFAM:SSF49599 Gene3D:3.90.890.10 CTD:146310
GeneTree:ENSGT00530000063647 OrthoDB:EOG4V6ZHF IPI:IPI00368706
RefSeq:NP_001100457.1 UniGene:Rn.89276 Ensembl:ENSRNOT00000018964
GeneID:302977 KEGG:rno:302977 UCSC:RGD:1309302 NextBio:650458
Uniprot:D3ZJQ8
Length = 238
Score = 122 (48.0 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCR 218
+F C++C +L P+ PC H FC+ C+FQ + R N CP CR
Sbjct: 17 NFLCSVCHGVLKRPMRLPCSHIFCKKCIFQWLARQNTCPCCR 58
>TAIR|locus:2064584 [details] [associations]
symbol:AT2G42030 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0046872 GO:GO:0008270 EMBL:U90439 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 HSSP:P15919 EMBL:AY058184
EMBL:AY072117 EMBL:AY096666 IPI:IPI00537204 PIR:A84849
RefSeq:NP_181733.1 UniGene:At.20315 UniGene:At.74233
ProteinModelPortal:P93744 SMR:P93744 EnsemblPlants:AT2G42030.1
GeneID:818803 KEGG:ath:AT2G42030 TAIR:At2g42030 eggNOG:NOG251015
HOGENOM:HOG000090666 InParanoid:P93744 OMA:SEAKECP PhylomeDB:P93744
ProtClustDB:CLSN2683808 ArrayExpress:P93744 Genevestigator:P93744
Uniprot:P93744
Length = 425
Score = 127 (49.8 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 27/75 (36%), Positives = 41/75 (54%)
Query: 178 FDCTLCLKLLYEPITTPCGHSFCRSCLFQ--SMDRGNKCPLCRAVLFITPRTCAVSVTLN 235
FDC +CL L +P+ T CGH +C SCL+Q + +CP+C+ + + +T V+
Sbjct: 139 FDCYICLDLSKDPVVTNCGHLYCWSCLYQWLQVSEAKECPVCKGEVSV--KT--VTPIYG 194
Query: 236 SIIQKNFPEEYAERK 250
IQK EE + K
Sbjct: 195 RGIQKRESEEVSNTK 209
>UNIPROTKB|E7EQQ5 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HGNC:HGNC:16276 ChiTaRS:TRIM5 EMBL:AC109341
IPI:IPI00879744 ProteinModelPortal:E7EQQ5 SMR:E7EQQ5
Ensembl:ENST00000412903 ArrayExpress:E7EQQ5 Bgee:E7EQQ5
Uniprot:E7EQQ5
Length = 209
Score = 120 (47.3 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 22/49 (44%), Positives = 35/49 (71%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLF----QSM-DRG-NKCPLCR 218
++ C +CL+LL +P++ CGHSFC++CL +SM D+G + CP+CR
Sbjct: 11 EEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCR 59
>TAIR|locus:2057780 [details] [associations]
symbol:PEX10 "peroxin 10" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0009793 "embryo development ending in seed
dormancy" evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009853 "photorespiration" evidence=IMP] [GO:0010381
"attachment of peroxisome to chloroplast" evidence=IMP] [GO:0006635
"fatty acid beta-oxidation" evidence=RCA;IMP] [GO:0016558 "protein
import into peroxisome matrix" evidence=RCA;IMP] InterPro:IPR001841
InterPro:IPR025654 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR006845 Prosite:PS00518 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0046872 GO:GO:0008270
GO:GO:0009793 GO:GO:0005779 GO:GO:0006635 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0016558 GO:GO:0009853 InterPro:IPR017907
EMBL:AC002505 EMBL:AC004484 EMBL:AF119572 EMBL:AJ276134
EMBL:AK117879 EMBL:BT005340 EMBL:AY087109 IPI:IPI00538786
PIR:T00968 RefSeq:NP_565621.1 UniGene:At.22386
ProteinModelPortal:Q9SYU4 SMR:Q9SYU4 IntAct:Q9SYU4 STRING:Q9SYU4
TCDB:3.A.20.1.2 PaxDb:Q9SYU4 PRIDE:Q9SYU4 EnsemblPlants:AT2G26350.1
GeneID:817175 KEGG:ath:AT2G26350 GeneFarm:2449 TAIR:At2g26350
eggNOG:COG5574 HOGENOM:HOG000005805 InParanoid:Q9SYU4 KO:K13346
OMA:FRQRQRA PhylomeDB:Q9SYU4 ProtClustDB:CLSN2688445
Genevestigator:Q9SYU4 GermOnline:AT2G26350 GO:GO:0010381
PANTHER:PTHR23350 Pfam:PF04757 Uniprot:Q9SYU4
Length = 381
Score = 126 (49.4 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 25/55 (45%), Positives = 30/55 (54%)
Query: 180 CTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLFITPRTCAVSVTL 234
CTLCL P TPCGH FC SC+ + + +CPLCR TP T + V L
Sbjct: 327 CTLCLSTRQHPTATPCGHVFCWSCIMEWCNEKQECPLCR-----TPNTHSSLVCL 376
>MGI|MGI:1929211 [details] [associations]
symbol:Rnf138 "ring finger protein 138" species:10090 "Mus
musculus" [GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089
SMART:SM00184 SMART:SM00355 UniPathway:UPA00143 MGI:MGI:1929211
Prosite:PS00518 GO:GO:0016055 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:P38398 GeneTree:ENSGT00530000063064
HOGENOM:HOG000230946 HOVERGEN:HBG074331 CTD:51444 eggNOG:NOG44750
KO:K10668 OMA:EANFTRQ OrthoDB:EOG4J9N0K EMBL:AB025010 EMBL:AB025011
EMBL:AK010486 EMBL:AK004238 EMBL:AK136138 EMBL:BC003712
IPI:IPI00123749 IPI:IPI00132441 RefSeq:NP_062680.2
RefSeq:NP_997506.1 UniGene:Mm.253542 ProteinModelPortal:Q9CQE0
SMR:Q9CQE0 IntAct:Q9CQE0 STRING:Q9CQE0 PhosphoSite:Q9CQE0
PRIDE:Q9CQE0 Ensembl:ENSMUST00000052396 Ensembl:ENSMUST00000072847
GeneID:56515 KEGG:mmu:56515 UCSC:uc008efb.1 UCSC:uc008efc.1
InParanoid:Q9CQE0 NextBio:312826 Bgee:Q9CQE0 CleanEx:MM_RNF138
Genevestigator:Q9CQE0 GermOnline:ENSMUSG00000024317 Uniprot:Q9CQE0
Length = 245
Score = 122 (48.0 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 176 DDFDCTLCLKLLYEPI-TTPCGHSFCRSCLFQSM-DRGNKCPLCRAVLFITPRTCAV-SV 232
DDF C +C ++L P+ T C H FCR C +M + G CPLCR + R C ++
Sbjct: 14 DDFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGSVTRRERACPERAL 73
Query: 233 TLNSIIQK 240
L +I+++
Sbjct: 74 DLENIMRR 81
>ZFIN|ZDB-GENE-070705-376 [details] [associations]
symbol:btr24 "bloodthirsty-related gene family,
member 24" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070705-376 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00660000095328 EMBL:CU861574 IPI:IPI00831988
PRIDE:F1R4R5 Ensembl:ENSDART00000148180 Uniprot:F1R4R5
Length = 527
Score = 128 (50.1 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 175 TDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGN--KCPLCRAVLFITPRTCAVSV 232
+++ C++CL + +P++TPCGH+FC+SCL + CP C P ++
Sbjct: 9 SEELQCSICLDVFTDPVSTPCGHNFCKSCLNTCWNNSQTCSCPYCNETFTQRP-DLKINT 67
Query: 233 TLNSIIQKNFPEEYAERK 250
TL I +++ E+ +K
Sbjct: 68 TLREI-SEHYKEKNPAKK 84
>ZFIN|ZDB-GENE-070424-161 [details] [associations]
symbol:ftr55 "finTRIM family, member 55"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070424-161 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 EMBL:BX322664
GeneTree:ENSGT00670000097622 IPI:IPI00630920
Ensembl:ENSDART00000019843 Uniprot:F1Q547
Length = 531
Score = 128 (50.1 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGN--KCPLCR 218
+ F C +CL LL +P+T PCGHS+C SC+ + D+ + CP CR
Sbjct: 9 EQFVCPVCLDLLKDPVTIPCGHSYCMSCITEFWDQKSIYSCPQCR 53
>UNIPROTKB|E1B7M2 [details] [associations]
symbol:TRIM31 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104499 EMBL:DAAA02055413
IPI:IPI00717514 Ensembl:ENSBTAT00000005888 Uniprot:E1B7M2
Length = 341
Score = 125 (49.1 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 171 TPERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGN---KCPLCRAVL---FIT 224
T + ++ C +CL +L +P T CGH+FC SC+ QS + + KCPLC ++ IT
Sbjct: 7 TGKLQEEMICPICLDILQDPATIDCGHNFCLSCITQSGEAADSVLKCPLCNKIVKRDTIT 66
Query: 225 PRTCAVSV 232
P V++
Sbjct: 67 PNWLLVNL 74
>ZFIN|ZDB-GENE-030616-265 [details] [associations]
symbol:si:busm1-182n13.1 "si:busm1-182n13.1"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-030616-265 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 HSSP:P38398
EMBL:AL662880 eggNOG:KOG2177 OrthoDB:EOG4R23TJ HOGENOM:HOG000234136
HOVERGEN:HBG106862 IPI:IPI00486925 ProteinModelPortal:Q8AW34
InParanoid:Q8AW34 OMA:ECFCEND Uniprot:Q8AW34
Length = 190
Score = 118 (46.6 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 24/71 (33%), Positives = 39/71 (54%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGN-----KCPLCRAVLFITPRTC-A 229
++F C +CL LL +P+T PCGHS+C++C+ D+ + C CR PR A
Sbjct: 9 EEFMCPVCLDLLKDPVTIPCGHSYCKTCITGCWDQEDDKRVYSCSQCREAF--NPRPALA 66
Query: 230 VSVTLNSIIQK 240
+ L +++K
Sbjct: 67 KNTILAEMVEK 77
>UNIPROTKB|F1RSD5 [details] [associations]
symbol:LOC100737114 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0030054 "cell junction" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000742 PROSITE:PS50089 SMART:SM00181 SMART:SM00184
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0030054 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104271 EMBL:FP245413
Ensembl:ENSSSCT00000019176 OMA:SEISRAC Uniprot:F1RSD5
Length = 258
Score = 109 (43.4 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 27/83 (32%), Positives = 45/83 (54%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMD-RGNK--CPLCRAVLFITPRTCAVSV 232
++ C++CL+ P+TTPCGH+FC CL ++ +G CP CR P+ +V
Sbjct: 9 EELSCSICLEPFKVPVTTPCGHNFCGLCLDETWAVQGPPYLCPQCRTGYETRPQLRKNTV 68
Query: 233 TLNSIIQKNFPEEYAERKSEHDS 255
L +++++ E A R + DS
Sbjct: 69 -LCAVVEQFLQAEQA-RPAVLDS 89
Score = 53 (23.7 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 16/71 (22%), Positives = 30/71 (42%)
Query: 281 HIFEPRYRLMVRRIMEGNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIESR 340
H +P R ++RR ++R+ P C VE C P P + ++E++
Sbjct: 145 HPLQPPVRDLMRRKCPQHNRLRDFFC-PEHSECICHVCLVEHKTCSPAPLSQASTDLENK 203
Query: 341 RRFRILRSWDQ 351
R ++ + Q
Sbjct: 204 LRHKLTIMYSQ 214
>TAIR|locus:505006682 [details] [associations]
symbol:AT5G48655 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=IEP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 eggNOG:NOG327779
EMBL:AY150482 EMBL:AK118224 IPI:IPI00544715 RefSeq:NP_568701.1
RefSeq:NP_851156.1 RefSeq:NP_974908.1 UniGene:At.22299
ProteinModelPortal:Q8GS41 SMR:Q8GS41 PaxDb:Q8GS41 PRIDE:Q8GS41
EnsemblPlants:AT5G48655.1 EnsemblPlants:AT5G48655.2
EnsemblPlants:AT5G48655.3 GeneID:834923 KEGG:ath:AT5G48655
TAIR:At5g48655 HOGENOM:HOG000070995 InParanoid:Q8GS41 OMA:PANISNK
PhylomeDB:Q8GS41 ProtClustDB:CLSN2689957 ArrayExpress:Q8GS41
Genevestigator:Q8GS41 Uniprot:Q8GS41
Length = 203
Score = 119 (46.9 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 155 NLERTTASLIGR-RIHGTPERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNK 213
N E +S + R + P F C +C+ E ++T CGH FC+ C+ ++ R K
Sbjct: 122 NDEVNMSSRVSRSKAPAPPPEEPKFTCPICMCPFTEEMSTKCGHIFCKGCIKMAISRQGK 181
Query: 214 CPLCR 218
CP CR
Sbjct: 182 CPTCR 186
>ZFIN|ZDB-GENE-090511-2 [details] [associations]
symbol:btr01 "bloodthirsty-related gene family,
member 1" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-090511-2 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00660000095328 EMBL:CU929294 IPI:IPI00773115
Ensembl:ENSDART00000073689 Bgee:F1QYX5 Uniprot:F1QYX5
Length = 565
Score = 128 (50.1 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNK---CPLCRAVLFITPRTCAVSV 232
+ F C++CL + P++TPCGHSFC SC+ + K CPLC+ P V+
Sbjct: 15 EQFTCSICLDIFTNPVSTPCGHSFCSSCISSYWEGQGKTCFCPLCKESFRKRPEL-HVNH 73
Query: 233 TLNSIIQK 240
TL I ++
Sbjct: 74 TLKEITEQ 81
>ZFIN|ZDB-GENE-070912-223 [details] [associations]
symbol:ftr09 "finTRIM family, member 9"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-070912-223 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
eggNOG:KOG2177 EMBL:BX572635 OrthoDB:EOG4R23TJ
GeneTree:ENSGT00670000097622 HOVERGEN:HBG106862 IPI:IPI00619609
Ensembl:ENSDART00000134802 OMA:DNTEAIF Uniprot:B0S717
Length = 289
Score = 123 (48.4 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 178 FDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNK-----CPLCRAVLFITPRTCAVSV 232
F+C++C+ LL +P+ PCGHS+C SC+ D+ + CP CR TPR
Sbjct: 14 FNCSICVDLLKDPVAIPCGHSYCMSCISGYWDQDEQKGVYSCPQCRQTF--TPRPALRKN 71
Query: 233 TLNSIIQKN 241
T+ + + +N
Sbjct: 72 TMLAEVVEN 80
>UNIPROTKB|E1BSL1 [details] [associations]
symbol:E1BSL1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0010212 "response to ionizing radiation"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0035518 "histone H2A monoubiquitination" evidence=IEA]
[GO:0035861 "site of double-strand break" evidence=IEA] [GO:0036351
"histone H2A-K13 ubiquitination" evidence=IEA] [GO:0036352 "histone
H2A-K15 ubiquitination" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA]
[GO:0045739 "positive regulation of DNA repair" evidence=IEA]
[GO:0045900 "negative regulation of translational elongation"
evidence=IEA] [GO:0070530 "K63-linked polyubiquitin binding"
evidence=IEA] [GO:0070535 "histone H2A K63-linked ubiquitination"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006302
GO:GO:0004842 GO:GO:0045739 GO:GO:0000151 GO:GO:0070535 OMA:KSIFQMF
GeneTree:ENSGT00620000087973 EMBL:AADN02024264 IPI:IPI00598198
Ensembl:ENSGALT00000010322 Uniprot:E1BSL1
Length = 572
Score = 127 (49.8 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 27/89 (30%), Positives = 44/89 (49%)
Query: 172 PERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKC-PLCRAVL-----FITP 225
P DD C +C+++ EP+T PC H+ C SC +++ + C P CR + +
Sbjct: 8 PLSLDDCLCQICMEVFVEPVTLPCNHTICNSCFQLTVENASLCCPFCRRRVSSWARYNAR 67
Query: 226 RTCAVSVTLNSIIQKNFPEEYAERKSEHD 254
R ++ L IQK +P+E R + D
Sbjct: 68 RNTLINWELWEKIQKKYPKECERRINGQD 96
Score = 44 (20.5 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 360 EWVQDIHPEGVEDRADLQDLTNNAAEYARLWLRREKESAR--QDRRR-LEKLL 409
E+ ++ E RA Q+ + EY + L E+E R ++RR+ +E+ L
Sbjct: 119 EYEAEVSKVEAERRAHEQEENKASEEYIQKLLAEEEEEHRLAEERRKEMEEQL 171
>WB|WBGene00011366 [details] [associations]
symbol:T02C1.2 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 EMBL:Z19156
RefSeq:NP_001022740.2 ProteinModelPortal:Q7YWU1 SMR:Q7YWU1
EnsemblMetazoa:T02C1.2 GeneID:176306 KEGG:cel:CELE_T02C1.2
UCSC:T02C1.2 CTD:176306 WormBase:T02C1.2 eggNOG:nemNOG04237
HOGENOM:HOG000019178 InParanoid:Q7YWU1 OMA:CTICYDI NextBio:892014
Uniprot:Q7YWU1
Length = 275
Score = 122 (48.0 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLFITPRTCAVSV-TL 234
DD CT+C ++ EP T C HSFC+ C+ Q + KCP C+ ++ + + L
Sbjct: 96 DDVLCTICYDIIVEPHTLRCQHSFCKKCIDQCLPLTRKCPSCQQWVYWSRKNKIFKEKVL 155
Query: 235 NSIIQKNFPEEYAE 248
+ +K +EY E
Sbjct: 156 RWVKEKQREDEYEE 169
>UNIPROTKB|F1RHN8 [details] [associations]
symbol:TRIM21 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090086 "negative regulation of protein
deubiquitination" evidence=IEA] [GO:0070206 "protein trimerization"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0045787 "positive regulation of cell cycle"
evidence=IEA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IEA] [GO:0006513 "protein monoubiquitination"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
InterPro:IPR020457 Pfam:PF00622 Pfam:PF00643 PRINTS:PR01406
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0019005 GO:GO:0032088 GO:GO:0004842
GO:GO:0000209 GO:GO:0070206 InterPro:IPR017907 GO:GO:0051865
GO:GO:0045787 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 GO:GO:0031648 GO:GO:0006513 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 GO:GO:0090086
GeneTree:ENSGT00690000101646 EMBL:CU915729
Ensembl:ENSSSCT00000016131 OMA:HITRIEA Uniprot:F1RHN8
Length = 469
Score = 126 (49.4 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQ-SMDRGNKCPLCR 218
D+ C++CL + EP++ CGHSFC+ C+ + D G+ CP+CR
Sbjct: 12 DEVTCSICLDPMVEPVSIECGHSFCQECISEVGKDGGSVCPVCR 55
>MGI|MGI:106657 [details] [associations]
symbol:Trim21 "tripartite motif-containing 21" species:10090
"Mus musculus" [GO:0000209 "protein polyubiquitination"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006513 "protein monoubiquitination"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0032088
"negative regulation of NF-kappaB transcription factor activity"
evidence=ISO] [GO:0045787 "positive regulation of cell cycle"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=ISO] [GO:0070206
"protein trimerization" evidence=ISO] [GO:0090086 "negative
regulation of protein deubiquitination" evidence=ISO]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
InterPro:IPR020457 Pfam:PF00622 Pfam:PF00643 PRINTS:PR01406
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
UniPathway:UPA00143 MGI:MGI:106657 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003723 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0007049
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0032088
GO:GO:0004842 GO:GO:0000209 InterPro:IPR017907 GO:GO:0051865
GO:GO:0045787 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 GO:GO:0031648 GO:GO:0006513 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 GO:GO:0090086
eggNOG:NOG276395 HOVERGEN:HBG001357 OrthoDB:EOG4KWJSP EMBL:L27990
IPI:IPI00331738 UniGene:Mm.321227 PDB:2VOK PDB:2VOL PDBsum:2VOK
PDBsum:2VOL ProteinModelPortal:Q62191 SMR:Q62191 STRING:Q62191
PhosphoSite:Q62191 PRIDE:Q62191 HOGENOM:HOG000234134
InParanoid:Q62191 EvolutionaryTrace:Q62191 CleanEx:MM_TRIM21
Genevestigator:Q62191 GermOnline:ENSMUSG00000030966 Uniprot:Q62191
Length = 470
Score = 117 (46.2 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQ-SMDRGNKCPLCR 218
++ C++CL + EP++ CGH FC+ C+F+ + G+ CP CR
Sbjct: 16 EEVTCSICLDPMVEPMSIECGHCFCKECIFEVGKNGGSSCPECR 59
Score = 52 (23.4 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 13/40 (32%), Positives = 25/40 (62%)
Query: 371 EDRADLQDLTNNAAEYARLWLRREKESARQDRRRLEKLLN 410
E++ LQ L + EY RL ++E E A +++ L++L++
Sbjct: 196 EEQRQLQRLEKDQREYLRLLGKKEAELAEKNQA-LQELIS 234
>UNIPROTKB|E9PMW8 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001594 PROSITE:PS50089
PROSITE:PS50216 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL359265 EMBL:AL162736 EMBL:AL513329
EMBL:AL590723 HGNC:HGNC:17440 ChiTaRS:RFWD2 IPI:IPI00979234
ProteinModelPortal:E9PMW8 SMR:E9PMW8 Ensembl:ENST00000491600
ArrayExpress:E9PMW8 Bgee:E9PMW8 Uniprot:E9PMW8
Length = 68
Score = 103 (41.3 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 186 LLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVL 221
++ E T CGHSFC C+ QS++ N+CP C V+
Sbjct: 1 MIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVV 36
>UNIPROTKB|E9PBZ8 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 EMBL:AL662832 EMBL:AL773535
EMBL:BX294158 EMBL:CR759928 EMBL:BX927214 EMBL:CR759281
EMBL:BX248580 HGNC:HGNC:10065 IPI:IPI00643713 SMR:E9PBZ8
Ensembl:ENST00000546617 Ensembl:ENST00000548540
Ensembl:ENST00000549051 Ensembl:ENST00000549269
Ensembl:ENST00000550625 Ensembl:ENST00000552165 Uniprot:E9PBZ8
Length = 411
Score = 125 (49.1 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 56/215 (26%), Positives = 96/215 (44%)
Query: 180 CTLCLKLLYEPITTPCGHSFCRSCL---FQSMDRGNKCPLCRAVLFITPRTCAVSVTLNS 236
C++CL+ L EP+ CGH+FC++C+ ++ ++R CP+CR R+ + L S
Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRY--RSLRPNRQLGS 86
Query: 237 IIQKNFPEEYAERKSEHDSLINFGVDLMPLFVMD----VVIPCQRFPLHIFEPRYRLMVR 292
+++ + +RK +SL + + LF + V + C H L
Sbjct: 87 MVEIAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPLD-D 145
Query: 293 RIMEGNHRMGMVIIDPTTGSVADFACEVEITEC---EPLPDGRFVLEIESRRRFRILRSW 349
E ++ ++P + EIT C E G +ESRR+ +ILR +
Sbjct: 146 ATQEYKEKL-QKCLEPLEQKLQ------EITRCKSSEEKKPGELKRLVESRRQ-QILREF 197
Query: 350 DQDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAA 384
++ R+ E + V E E++ LQ L NAA
Sbjct: 198 EELHRRLDEEQQVLLSRLEE-EEQDILQRLRENAA 231
>DICTYBASE|DDB_G0285333 [details] [associations]
symbol:DDB_G0285333 "RING finger protein 185"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
dictyBase:DDB_G0285333 Prosite:PS00518 GO:GO:0046872
EMBL:AAFI02000079 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 eggNOG:COG5574 KO:K10666
RefSeq:XP_638242.1 ProteinModelPortal:Q54ND8
EnsemblProtists:DDB0186444 GeneID:8625050 KEGG:ddi:DDB_G0285333
InParanoid:Q54ND8 OMA:CIFQWLQ Uniprot:Q54ND8
Length = 281
Score = 122 (48.0 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 173 ERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGN--KCPLCRA 219
+++ F+C +C + EP+ T CGH FC +C+FQ + + +CP+C+A
Sbjct: 66 QQSSPFECNICFDDVSEPVVTQCGHLFCWTCIFQWLQHNSSQQCPVCKA 114
>UNIPROTKB|Q6AZZ1 [details] [associations]
symbol:TRIM68 "E3 ubiquitin-protein ligase TRIM68"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0050681
"androgen receptor binding" evidence=IPI] [GO:0035035 "histone
acetyltransferase binding" evidence=IPI] [GO:0051865 "protein
autoubiquitination" evidence=IDA] [GO:0060765 "regulation of
androgen receptor signaling pathway" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005794 GO:GO:0048471
EMBL:CH471064 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0060765 InterPro:IPR017907
GO:GO:0051865 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 HSSP:P38398 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HOVERGEN:HBG001357 eggNOG:NOG252602
EMBL:AF360739 EMBL:AF439153 EMBL:AK001231 EMBL:AK022923
EMBL:AK291166 EMBL:AK056523 EMBL:AC090719 EMBL:BC075058
EMBL:BC109063 EMBL:AY005802 IPI:IPI00292487 RefSeq:NP_060543.5
UniGene:Hs.523438 UniGene:Hs.738828 ProteinModelPortal:Q6AZZ1
SMR:Q6AZZ1 IntAct:Q6AZZ1 STRING:Q6AZZ1 PhosphoSite:Q6AZZ1
DMDM:74748376 PaxDb:Q6AZZ1 PRIDE:Q6AZZ1 DNASU:55128
Ensembl:ENST00000300747 GeneID:55128 KEGG:hsa:55128 UCSC:uc001lzf.2
CTD:55128 GeneCards:GC11M004577 HGNC:HGNC:21161 HPA:HPA023455
MIM:613184 neXtProt:NX_Q6AZZ1 PharmGKB:PA134939870
InParanoid:Q6AZZ1 KO:K12033 OMA:CYSIGTN OrthoDB:EOG4XSKPR
ChiTaRS:TRIM68 GenomeRNAi:55128 NextBio:58790 ArrayExpress:Q6AZZ1
Bgee:Q6AZZ1 CleanEx:HS_TRIM68 Genevestigator:Q6AZZ1
GermOnline:ENSG00000167333 Uniprot:Q6AZZ1
Length = 485
Score = 126 (49.4 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 26/72 (36%), Positives = 40/72 (55%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLF-------QSMDRGNKCPLCRAVLFITPRTC 228
++ C +C+ L EP++ CGHSFC SCL +S + G CPLCRA + PR
Sbjct: 12 EEVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCRAP--VQPRNL 69
Query: 229 AVSVTLNSIIQK 240
+ L ++++K
Sbjct: 70 RPNWQLANVVEK 81
>UNIPROTKB|E2RFB0 [details] [associations]
symbol:TRIM50 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00680000099496 CTD:135892 KO:K12024 OMA:TFFDADR
EMBL:AAEX03004245 RefSeq:XP_546929.2 ProteinModelPortal:E2RFB0
Ensembl:ENSCAFT00000020820 GeneID:489811 KEGG:cfa:489811
NextBio:20862932 Uniprot:E2RFB0
Length = 487
Score = 126 (49.4 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 26/86 (30%), Positives = 45/86 (52%)
Query: 172 PERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLF---QSMDRGNKCPLCRAVLFITPRTC 228
PE D C +CL++ EP+ CGHS+C+ CL + +D +CP+C+ + +
Sbjct: 8 PELEDRLQCPICLEVFKEPMMLQCGHSYCKGCLVSLSRHLDSELRCPVCQQE--VDSSSS 65
Query: 229 AVSVTLNSIIQK-NFPEEYAERKSEH 253
+V+L +I+ FP + + EH
Sbjct: 66 PPNVSLARVIEALQFPGDPEPKVCEH 91
>UNIPROTKB|F1RLR6 [details] [associations]
symbol:BFAR "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001660 PROSITE:PS50089
PROSITE:PS50105 SMART:SM00184 SMART:SM00454 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 InterPro:IPR017907
GeneTree:ENSGT00390000005386 EMBL:CU694585
Ensembl:ENSSSCT00000008634 OMA:IFMELER Uniprot:F1RLR6
Length = 319
Score = 123 (48.4 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 26/70 (37%), Positives = 37/70 (52%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCL--FQSMDRGNKCPLCRAVLFITPRTCAVSVTL 234
+F C C +L P T CGHSFCR CL + + + +CP CR P+ V++ L
Sbjct: 31 EFSCHCCYDILVNPTTLNCGHSFCRHCLALWWASSKKTECPECRDKWEGFPK---VNILL 87
Query: 235 NSIIQKNFPE 244
I+K FP+
Sbjct: 88 RDAIEKLFPD 97
>UNIPROTKB|E1BQ22 [details] [associations]
symbol:TRIM68 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060765 "regulation of androgen receptor signaling
pathway" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=IEA]
[GO:0035035 "histone acetyltransferase binding" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0005794 GO:GO:0005730 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0060765 InterPro:IPR017907
GO:GO:0051865 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00700000104307
EMBL:DAAA02040960 IPI:IPI00715169 Ensembl:ENSBTAT00000015061
OMA:MQKLEQN Uniprot:E1BQ22
Length = 495
Score = 126 (49.4 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLF-------QSMDRGNKCPLCRAVLFITPRTC 228
++ C +C+ L EP++ CGHSFC SCL +S + CPLCRA I PR
Sbjct: 12 EEVACPICMTFLKEPVSIDCGHSFCHSCLLGLWEVPGESQNWAYSCPLCRAP--IEPRNL 69
Query: 229 AVSVTLNSIIQK 240
+ L ++++K
Sbjct: 70 RPNWQLANVVEK 81
>ZFIN|ZDB-GENE-060312-27 [details] [associations]
symbol:ftr67 "finTRIM family, member 67"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-060312-27
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 HOGENOM:HOG000234136
HOVERGEN:HBG106862 EMBL:BC093187 IPI:IPI00499361 UniGene:Dr.75870
InParanoid:Q567F9 ArrayExpress:Q567F9 Uniprot:Q567F9
Length = 431
Score = 125 (49.1 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNK-----CPLCR 218
D F+C++CL +L +P+T PCGHS+C+ C+ D+ + CP CR
Sbjct: 18 DQFNCSICLDVLKDPVTIPCGHSYCKGCIKNYWDQDDYLGIYGCPQCR 65
>UNIPROTKB|Q8TBB1 [details] [associations]
symbol:LNX1 "E3 ubiquitin-protein ligase LNX" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] Pfam:PF00595 InterPro:IPR001841
InterPro:IPR001478 PROSITE:PS50089 PROSITE:PS50106 SMART:SM00184
SMART:SM00228 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 GO:GO:0051260 Gene3D:3.30.40.10
InterPro:IPR013083 SUPFAM:SSF50156 GO:GO:0004842 InterPro:IPR017907
GO:GO:0042787 EMBL:AF237782 EMBL:AY358326 EMBL:AK056823
EMBL:AC058822 EMBL:AC095040 EMBL:BC022983 EMBL:BC034737
IPI:IPI00152181 IPI:IPI00305598 RefSeq:NP_001119800.1
RefSeq:NP_116011.2 UniGene:Hs.518760 PDB:3B76 PDBsum:3B76
ProteinModelPortal:Q8TBB1 SMR:Q8TBB1 IntAct:Q8TBB1
MINT:MINT-1441889 STRING:Q8TBB1 PhosphoSite:Q8TBB1 DMDM:29840786
PaxDb:Q8TBB1 PRIDE:Q8TBB1 DNASU:84708 Ensembl:ENST00000263925
Ensembl:ENST00000306888 Ensembl:ENST00000513421 GeneID:84708
KEGG:hsa:84708 UCSC:uc003haf.4 UCSC:uc003hag.4 CTD:84708
GeneCards:GC04M054325 HGNC:HGNC:6657 HPA:HPA002235 MIM:609732
neXtProt:NX_Q8TBB1 PharmGKB:PA30419 eggNOG:NOG236845
HOGENOM:HOG000261605 HOVERGEN:HBG039539 InParanoid:Q8TBB1 KO:K10692
OMA:LQHCKKS PhylomeDB:Q8TBB1 EvolutionaryTrace:Q8TBB1
GenomeRNAi:84708 NextBio:74806 ArrayExpress:Q8TBB1 Bgee:Q8TBB1
CleanEx:HS_LNX1 Genevestigator:Q8TBB1 GermOnline:ENSG00000072201
Uniprot:Q8TBB1
Length = 728
Score = 128 (50.1 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 27/81 (33%), Positives = 43/81 (53%)
Query: 162 SLIGRRIHGTPERTDD-FDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAV 220
SL + PE DD C +CL+ L +P+ TPCGH++C CL + + CP+ R
Sbjct: 22 SLEENHFYSYPEEVDDDLICHICLQALLDPLDTPCGHTYCTLCLTNFLVEKDFCPMDRKP 81
Query: 221 LFITPRTCAVS-VTLNSIIQK 240
L + + C S + +N ++ K
Sbjct: 82 LVL--QHCKKSSILVNKLLNK 100
>ZFIN|ZDB-GENE-040813-1 [details] [associations]
symbol:rnf114 "ring finger protein 114" species:7955
"Danio rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089
SMART:SM00184 SMART:SM00355 Prosite:PS00518 Pfam:PF05605
ZFIN:ZDB-GENE-040813-1 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR008598 CTD:55905 eggNOG:NOG145063
GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946
HOVERGEN:HBG074331 KO:K15697 OMA:IEHIQRR OrthoDB:EOG4CVG7Q
EMBL:CR759920 EMBL:BC079515 EMBL:AY609381 IPI:IPI00508716
RefSeq:NP_001001828.2 UniGene:Dr.86280 Ensembl:ENSDART00000019667
GeneID:414843 KEGG:dre:414843 InParanoid:Q6J0N1 NextBio:20818739
Uniprot:Q6J0N1
Length = 221
Score = 119 (46.9 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSM-DRGNKCPLCRAVL 221
DDF C +CL++ P+TT CGH+FC CL + + + C +CR L
Sbjct: 18 DDFVCPVCLEIFVRPMTTQCGHTFCNDCLQECLRPQSPVCAVCRTDL 64
>ZFIN|ZDB-GENE-060228-2 [details] [associations]
symbol:lnx2a "ligand of numb-protein X 2a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00595 InterPro:IPR001841 InterPro:IPR001478 PROSITE:PS50089
PROSITE:PS50106 SMART:SM00184 SMART:SM00228 Prosite:PS00518
ZFIN:ZDB-GENE-060228-2 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF50156
InterPro:IPR017907 GeneTree:ENSGT00650000092901 KO:K10692
OMA:EKDFCPL EMBL:BX571696 IPI:IPI00491636 RefSeq:NP_001106696.2
UniGene:Dr.82850 Ensembl:ENSDART00000046211 GeneID:553331
KEGG:dre:553331 CTD:553331 NextBio:20880097 ArrayExpress:F1R5N4
Bgee:F1R5N4 Uniprot:F1R5N4
Length = 737
Score = 128 (50.1 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 173 ERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLFITPRTCA-VS 231
E DD C +CL+ L +P+ TPCGH+FC CL + + CPL RA L + + C S
Sbjct: 42 EVDDDLVCHICLQPLVQPLDTPCGHTFCARCLRSFLQERDFCPLDRAHLQL--QVCRRSS 99
Query: 232 VTLNSIIQK 240
+ ++ ++ K
Sbjct: 100 ILVHKLLDK 108
>UNIPROTKB|E7EQW4 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 PANTHER:PTHR13763 EMBL:AC060780 EMBL:AC135721
HGNC:HGNC:1100 ChiTaRS:BRCA1 IPI:IPI00947541
ProteinModelPortal:E7EQW4 SMR:E7EQW4 Ensembl:ENST00000476777
ArrayExpress:E7EQW4 Bgee:E7EQW4 Uniprot:E7EQW4
Length = 222
Score = 119 (46.9 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 21/65 (32%), Positives = 42/65 (64%)
Query: 179 DCTLCLKLLYEPITTPCGHSFCRSCLFQSMD--RG-NKCPLCRAVLFITPRTCAVSVTLN 235
+C +CL+L+ EP++T C H FC+ C+ + ++ +G ++CPLC+ IT R+ S +
Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKND--ITKRSLQESTRFS 80
Query: 236 SIIQK 240
++++
Sbjct: 81 QLVEE 85
>UNIPROTKB|J9P325 [details] [associations]
symbol:PCGF3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 OMA:THLKKFI EMBL:AAEX03002650
Ensembl:ENSCAFT00000044431 Uniprot:J9P325
Length = 269
Score = 121 (47.7 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 29/88 (32%), Positives = 45/88 (51%)
Query: 180 CTLCLKLLYEPIT-TPCGHSFCRSCLFQSMDRGNKCPLCRAVLFIT-P-RTCAVSVTLNS 236
C LC L + T T C H+FCRSCL + ++ N CP CR V+ + P + T+
Sbjct: 17 CRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTMQD 76
Query: 237 IIQKNFPE-EYAERKSEHDSLINFGVDL 263
I+ K P + AE + + D G+++
Sbjct: 77 IVYKLVPGLQEAEMRKQRDFYHKLGMEV 104
>ZFIN|ZDB-GENE-090312-35 [details] [associations]
symbol:ftr57 "finTRIM family, member 57"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-090312-35 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00670000097622
EMBL:CT025929 IPI:IPI00897481 Ensembl:ENSDART00000112220
Uniprot:F1QFD3
Length = 541
Score = 126 (49.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 25/71 (35%), Positives = 40/71 (56%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGN-----KCPLCRAVLFITPRTC-A 229
++F C +CL LL +P+T PCGHS+C++C+ D+ + CP CR PR A
Sbjct: 9 EEFMCPVCLDLLKDPVTIPCGHSYCKTCITGCWDQEDDKRVYSCPQCREAF--NPRPALA 66
Query: 230 VSVTLNSIIQK 240
+ L +++K
Sbjct: 67 KNTILAEMVEK 77
>DICTYBASE|DDB_G0286991 [details] [associations]
symbol:DDB_G0286991 species:44689 "Dictyostelium
discoideum" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
dictyBase:DDB_G0286991 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:KOG2177 EMBL:AAFI02000093
RefSeq:XP_637452.1 ProteinModelPortal:Q54L05
EnsemblProtists:DDB0187224 GeneID:8625898 KEGG:ddi:DDB_G0286991
InParanoid:Q54L05 OMA:FDIETHI Uniprot:Q54L05
Length = 459
Score = 125 (49.1 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 175 TDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNK----CPLCRAVLFITPR 226
++DF C++C +L PI PC H+FC+SC+ + M G K CP CR + +T +
Sbjct: 59 SEDFTCSICYELFERPIILPCNHNFCKSCI-EDMVIGQKQIFHCPFCRTEVKLTEK 113
>UNIPROTKB|E1C626 [details] [associations]
symbol:TRAF6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004871 "signal transducer activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA] [GO:0001843
"neural tube closure" evidence=IEA] [GO:0002726 "positive
regulation of T cell cytokine production" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0009898 "internal side of plasma membrane" evidence=IEA]
[GO:0019886 "antigen processing and presentation of exogenous
peptide antigen via MHC class II" evidence=IEA] [GO:0030316
"osteoclast differentiation" evidence=IEA] [GO:0031435
"mitogen-activated protein kinase kinase kinase binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0031996
"thioesterase binding" evidence=IEA] [GO:0032743 "positive
regulation of interleukin-2 production" evidence=IEA] [GO:0035631
"CD40 receptor complex" evidence=IEA] [GO:0042088 "T-helper 1 type
immune response" evidence=IEA] [GO:0042102 "positive regulation of
T cell proliferation" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0043011 "myeloid dendritic
cell differentiation" evidence=IEA] [GO:0043123 "positive
regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0043422 "protein kinase B binding" evidence=IEA] [GO:0043507
"positive regulation of JUN kinase activity" evidence=IEA]
[GO:0045084 "positive regulation of interleukin-12 biosynthetic
process" evidence=IEA] [GO:0045410 "positive regulation of
interleukin-6 biosynthetic process" evidence=IEA] [GO:0045453 "bone
resorption" evidence=IEA] [GO:0045672 "positive regulation of
osteoclast differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0048468 "cell development" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0050852 "T cell receptor signaling pathway" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
[GO:0051092 "positive regulation of NF-kappaB transcription factor
activity" evidence=IEA] [GO:0070498 "interleukin-1-mediated
signaling pathway" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:2000679 "positive regulation of
transcription regulatory region DNA binding" evidence=IEA]
[GO:0002218 "activation of innate immune response" evidence=TAS]
[GO:0002224 "toll-like receptor signaling pathway" evidence=TAS]
[GO:0002755 "MyD88-dependent toll-like receptor signaling pathway"
evidence=TAS] [GO:0007250 "activation of NF-kappaB-inducing kinase
activity" evidence=TAS] [GO:0034134 "toll-like receptor 2 signaling
pathway" evidence=TAS] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=TAS] [GO:0034142 "toll-like receptor 4 signaling
pathway" evidence=TAS] [GO:0034146 "toll-like receptor 5 signaling
pathway" evidence=TAS] [GO:0034154 "toll-like receptor 7 signaling
pathway" evidence=TAS] [GO:0035419 "activation of MAPK activity
involved in innate immune response" evidence=TAS] [GO:0035681
"toll-like receptor 15 signaling pathway" evidence=TAS] [GO:0035682
"toll-like receptor 21 signaling pathway" evidence=TAS]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 Pfam:PF13639 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
Prosite:PS00518 GO:GO:0005829 GO:GO:0048471 GO:GO:0042981
GO:GO:0019886 GO:GO:0050852 GO:GO:0042088 GO:GO:0046872
GO:GO:0043123 GO:GO:0008270 GO:GO:0031965 GO:GO:0045944
GO:GO:0000122 GO:GO:0035419 GO:GO:0051092 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0042102 GO:GO:0004842 GO:GO:0007250
GO:GO:0009898 InterPro:IPR017907 GO:GO:0070534 GO:GO:0002755
GO:GO:0034134 GO:GO:0034138 GO:GO:0034142 GO:GO:0007249
Reactome:REACT_102124 SUPFAM:SSF49599 GO:GO:0035631 GO:GO:0045672
GO:GO:0032743 GO:GO:0051023 GO:GO:0043507 GO:GO:0070498
GO:GO:0045410 Reactome:REACT_147795 GO:GO:0035681 GO:GO:0034146
GO:GO:2000679 GO:GO:0045084 GO:GO:0035682 GO:GO:0034154
GO:GO:0031666 GO:GO:0002726 GeneTree:ENSGT00550000074359
OMA:SEAPIRQ PANTHER:PTHR10131:SF48 EMBL:AADN02033086
IPI:IPI00571717 Ensembl:ENSGALT00000012888 Uniprot:E1C626
Length = 548
Score = 126 (49.4 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 165 GRRIHGTPERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSM----DRGNKCPLCRAV 220
G + P ++C +CL L E + TPCGH FC+ C+ +S+ D G+KCP+ +
Sbjct: 55 GYDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRRCRDAGHKCPVDNEI 114
Query: 221 L 221
L
Sbjct: 115 L 115
>UNIPROTKB|Q6INS5 [details] [associations]
symbol:rnf168 "E3 ubiquitin-protein ligase RNF168"
species:8355 "Xenopus laevis" [GO:0000151 "ubiquitin ligase
complex" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0010212 "response to ionizing radiation" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0035518
"histone H2A monoubiquitination" evidence=ISS] [GO:0035861 "site of
double-strand break" evidence=ISS] [GO:0036351 "histone H2A-K13
ubiquitination" evidence=ISS] [GO:0036352 "histone H2A-K15
ubiquitination" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0043130 "ubiquitin binding" evidence=ISS]
[GO:0045190 "isotype switching" evidence=ISS] [GO:0045739 "positive
regulation of DNA repair" evidence=ISS] [GO:0045900 "negative
regulation of translational elongation" evidence=ISS] [GO:0070530
"K63-linked polyubiquitin binding" evidence=ISS] [GO:0070534
"protein K63-linked ubiquitination" evidence=ISS] [GO:0070535
"histone H2A K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0010212 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006302 GO:GO:0006511 GO:GO:0045190
GO:GO:0004842 GO:GO:0042393 GO:GO:0045739 GO:GO:0000151
GO:GO:0035518 GO:GO:0045900 GO:GO:0035861 GO:GO:0070530 HSSP:Q13049
CTD:165918 HOVERGEN:HBG067220 GO:GO:0070535 GO:GO:0036351
GO:GO:0036352 EMBL:BC072198 RefSeq:NP_001085123.1 UniGene:Xl.6274
ProteinModelPortal:Q6INS5 GeneID:432198 KEGG:xla:432198
Xenbase:XB-GENE-5765277 Uniprot:Q6INS5
Length = 557
Score = 126 (49.4 bits), Expect = 0.00010, P = 0.00010
Identities = 29/83 (34%), Positives = 43/83 (51%)
Query: 180 CTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKC-PLCR------AVLFITPRTCAVSV 232
C +C ++L EP+T PC H+ C C ++++ + C P CR A L RT V+
Sbjct: 16 CPICQEILLEPVTLPCKHTLCNPCFQMTVEKASLCCPFCRKRVSTWARLHSRTRTL-VNT 74
Query: 233 TLNSIIQKNFPEEYAERKSEHDS 255
L IQK +P+E R S +S
Sbjct: 75 ELWERIQKQYPKECQRRASGQES 97
>UNIPROTKB|E7EN90 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR011364 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0007420 GO:GO:0032355 GO:GO:0005759
GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 GO:GO:0008270
GO:GO:0006281 GO:GO:0007584 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000794 InterPro:IPR017907 PANTHER:PTHR13763 EMBL:AC060780
EMBL:AC135721 HGNC:HGNC:1100 ChiTaRS:BRCA1 GO:GO:0043009
GO:GO:0009048 GO:GO:0007098 IPI:IPI00945744 SMR:E7EN90
Ensembl:ENST00000461221 Ensembl:ENST00000461798 Uniprot:E7EN90
Length = 63
Score = 102 (41.0 bits), Expect = 0.00010, P = 0.00010
Identities = 16/41 (39%), Positives = 30/41 (73%)
Query: 179 DCTLCLKLLYEPITTPCGHSFCRSCLFQSMD--RG-NKCPL 216
+C +CL+L+ EP++T C H FC+ C+ + ++ +G ++CPL
Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPL 63
>RGD|631346 [details] [associations]
symbol:Trim50 "tripartite motif-containing 50" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016235 "aggresome" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0070201 "regulation of establishment of protein localization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 RGD:631346
Prosite:PS00518 GO:GO:0043231 GO:GO:0005737 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
CTD:135892 eggNOG:NOG245385 HOVERGEN:HBG106596 KO:K12024
OrthoDB:EOG4RNB87 EMBL:AY081950 IPI:IPI00389366 RefSeq:NP_851594.1
UniGene:Rn.43040 ProteinModelPortal:Q810I1 PRIDE:Q810I1
GeneID:288596 KEGG:rno:288596 UCSC:RGD:631346 InParanoid:Q810I1
NextBio:628389 Genevestigator:Q810I1 Uniprot:Q810I1
Length = 483
Score = 125 (49.1 bits), Expect = 0.00010, P = 0.00010
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 172 PERTDDFDCTLCLKLLYEPITTPCGHSFCRSCL---FQSMDRGNKCPLCR 218
PE D C +CL++ EP+ CGHS+C++CL + +D +CP+CR
Sbjct: 8 PELQDQLQCPICLEVFKEPLMLQCGHSYCKNCLDSLSEHLDSELRCPVCR 57
>UNIPROTKB|Q810I1 [details] [associations]
symbol:Trim50 "E3 ubiquitin-protein ligase TRIM50"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 RGD:631346
Prosite:PS00518 GO:GO:0043231 GO:GO:0005737 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
CTD:135892 eggNOG:NOG245385 HOVERGEN:HBG106596 KO:K12024
OrthoDB:EOG4RNB87 EMBL:AY081950 IPI:IPI00389366 RefSeq:NP_851594.1
UniGene:Rn.43040 ProteinModelPortal:Q810I1 PRIDE:Q810I1
GeneID:288596 KEGG:rno:288596 UCSC:RGD:631346 InParanoid:Q810I1
NextBio:628389 Genevestigator:Q810I1 Uniprot:Q810I1
Length = 483
Score = 125 (49.1 bits), Expect = 0.00010, P = 0.00010
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 172 PERTDDFDCTLCLKLLYEPITTPCGHSFCRSCL---FQSMDRGNKCPLCR 218
PE D C +CL++ EP+ CGHS+C++CL + +D +CP+CR
Sbjct: 8 PELQDQLQCPICLEVFKEPLMLQCGHSYCKNCLDSLSEHLDSELRCPVCR 57
>UNIPROTKB|F5H297 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 EMBL:AL662832
EMBL:AL662795 EMBL:AL773535 EMBL:BX294158 EMBL:CR759928
EMBL:BX927214 EMBL:CR759281 EMBL:BX248580 HGNC:HGNC:10065
IPI:IPI01011847 SMR:F5H297 Ensembl:ENST00000540416
Ensembl:ENST00000546886 Ensembl:ENST00000547272
Ensembl:ENST00000547462 Ensembl:ENST00000547598
Ensembl:ENST00000552594 Ensembl:ENST00000552805 Uniprot:F5H297
Length = 488
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 56/215 (26%), Positives = 96/215 (44%)
Query: 180 CTLCLKLLYEPITTPCGHSFCRSCL---FQSMDRGNKCPLCRAVLFITPRTCAVSVTLNS 236
C++CL+ L EP+ CGH+FC++C+ ++ ++R CP+CR R+ + L S
Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRY--RSLRPNRQLGS 86
Query: 237 IIQKNFPEEYAERKSEHDSLINFGVDLMPLFVMD----VVIPCQRFPLHIFEPRYRLMVR 292
+++ + +RK +SL + + LF + V + C H L
Sbjct: 87 MVEIAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPLD-D 145
Query: 293 RIMEGNHRMGMVIIDPTTGSVADFACEVEITEC---EPLPDGRFVLEIESRRRFRILRSW 349
E ++ ++P + EIT C E G +ESRR+ +ILR +
Sbjct: 146 ATQEYKEKL-QKCLEPLEQKLQ------EITRCKSSEEKKPGELKRLVESRRQ-QILREF 197
Query: 350 DQDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAA 384
++ R+ E + V E E++ LQ L NAA
Sbjct: 198 EELHRRLDEEQQVLLSRLEE-EEQDILQRLRENAA 231
>DICTYBASE|DDB_G0270568 [details] [associations]
symbol:DDB_G0270568 "C3HC4-type zinc
finger-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 dictyBase:DDB_G0270568 Prosite:PS00518
EMBL:AAFI02000005 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 eggNOG:COG5432
RefSeq:XP_646094.2 ProteinModelPortal:Q55DN7
EnsemblProtists:DDB0201772 GeneID:8617044 KEGG:ddi:DDB_G0270568
InParanoid:Q55DN7 OMA:VPPSFIN ProtClustDB:CLSZ2445168
Uniprot:Q55DN7
Length = 419
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLC 217
+D C +CL + E T CGH+FC C+ + ++R +KCPLC
Sbjct: 21 EDISCPICLNFIEECSTLSCGHNFCHKCVSECINRNHKCPLC 62
>UNIPROTKB|I3LAF0 [details] [associations]
symbol:PCGF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031519 "PcG protein complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519
GeneTree:ENSGT00550000074463 OMA:THLKKFI EMBL:FP102972
Ensembl:ENSSSCT00000030851 Uniprot:I3LAF0
Length = 203
Score = 117 (46.2 bits), Expect = 0.00011, P = 0.00011
Identities = 28/88 (31%), Positives = 45/88 (51%)
Query: 180 CTLCLKLLYEPIT-TPCGHSFCRSCLFQSMDRGNKCPLCRAVLFIT-P-RTCAVSVTLNS 236
C LC L + T T C H+FCRSCL + ++ N CP CR V+ + P + T+
Sbjct: 17 CRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTMQD 76
Query: 237 IIQKNFPE-EYAERKSEHDSLINFGVDL 263
I+ K P + AE + + + G+++
Sbjct: 77 IVYKLVPGLQEAEMRKQREFYHKLGLEV 104
>UNIPROTKB|F1PGG1 [details] [associations]
symbol:PCGF3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 EMBL:AAEX03002650
Ensembl:ENSCAFT00000026535 Uniprot:F1PGG1
Length = 286
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 29/88 (32%), Positives = 45/88 (51%)
Query: 180 CTLCLKLLYEPIT-TPCGHSFCRSCLFQSMDRGNKCPLCRAVLFIT-P-RTCAVSVTLNS 236
C LC L + T T C H+FCRSCL + ++ N CP CR V+ + P + T+
Sbjct: 61 CRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTMQD 120
Query: 237 IIQKNFPE-EYAERKSEHDSLINFGVDL 263
I+ K P + AE + + D G+++
Sbjct: 121 IVYKLVPGLQEAEMRKQRDFYHKLGMEV 148
>UNIPROTKB|G3MWR7 [details] [associations]
symbol:TRIM31 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104499 EMBL:DAAA02055413 OMA:WEAELQG
Ensembl:ENSBTAT00000062975 Uniprot:G3MWR7
Length = 509
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 171 TPERTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGN---KCPLCRAVL---FIT 224
T + ++ C +CL +L +P T CGH+FC SC+ QS + + KCPLC ++ IT
Sbjct: 7 TGKLQEEMICPICLDILQDPATIDCGHNFCLSCITQSGEAADSVLKCPLCNKIVKRDTIT 66
Query: 225 PRTCAVSV 232
P V++
Sbjct: 67 PNWLLVNL 74
>ZFIN|ZDB-GENE-070912-109 [details] [associations]
symbol:ftr33 "finTRIM family, member 33"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 Prosite:PS00518 ZFIN:ZDB-GENE-070912-109
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR006574 SMART:SM00589 eggNOG:NOG253021 OrthoDB:EOG4R23TJ
GeneTree:ENSGT00670000097622 HOGENOM:HOG000234136
HOVERGEN:HBG106862 EMBL:BX323812 IPI:IPI01007205
Ensembl:ENSDART00000146341 OMA:DRETITC Uniprot:B0S645
Length = 510
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 25/70 (35%), Positives = 38/70 (54%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCLF-----QSMDRGNKCPLCRAVLFITPRTC-AV 230
+F C++CL LL +P+ PCGHS+C SC+ + R CP CR +PR A
Sbjct: 16 EFSCSVCLDLLKDPVAIPCGHSYCMSCITDCWNQEDQKRVYSCPQCRQTF--SPRPALAK 73
Query: 231 SVTLNSIIQK 240
+ L +++K
Sbjct: 74 NTMLAEVLEK 83
>UNIPROTKB|F5H899 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 EMBL:AL662832
EMBL:AL773535 EMBL:BX294158 EMBL:CR759928 EMBL:BX927214
EMBL:CR759281 EMBL:BX248580 HGNC:HGNC:10065 IPI:IPI01009635
SMR:F5H899 Ensembl:ENST00000546867 Ensembl:ENST00000548680
Ensembl:ENST00000549959 Ensembl:ENST00000550063
Ensembl:ENST00000550432 Ensembl:ENST00000552047 Uniprot:F5H899
Length = 518
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 56/215 (26%), Positives = 96/215 (44%)
Query: 180 CTLCLKLLYEPITTPCGHSFCRSCL---FQSMDRGNKCPLCRAVLFITPRTCAVSVTLNS 236
C++CL+ L EP+ CGH+FC++C+ ++ ++R CP+CR R+ + L S
Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRY--RSLRPNRQLGS 86
Query: 237 IIQKNFPEEYAERKSEHDSLINFGVDLMPLFVMD----VVIPCQRFPLHIFEPRYRLMVR 292
+++ + +RK +SL + + LF + V + C H L
Sbjct: 87 MVEIAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPLD-D 145
Query: 293 RIMEGNHRMGMVIIDPTTGSVADFACEVEITEC---EPLPDGRFVLEIESRRRFRILRSW 349
E ++ ++P + EIT C E G +ESRR+ +ILR +
Sbjct: 146 ATQEYKEKL-QKCLEPLEQKLQ------EITRCKSSEEKKPGELKRLVESRRQ-QILREF 197
Query: 350 DQDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAA 384
++ R+ E + V E E++ LQ L NAA
Sbjct: 198 EELHRRLDEEQQVLLSRLEE-EEQDILQRLRENAA 231
>UNIPROTKB|Q9HCM9 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042802 "identical
protein binding" evidence=IPI] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 GO:GO:0005829 GO:GO:0005739 GO:GO:0006915
EMBL:CH471081 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0016567 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234133 HOVERGEN:HBG001357 EMBL:AL662832 EMBL:AL662795
EMBL:AL773535 EMBL:CR759928 EMBL:BX927214 EMBL:CR759281
EMBL:AB046381 EMBL:BT007370 EMBL:AB110937 EMBL:AK292512
EMBL:AB110938 EMBL:AB202089 EMBL:BX248580 EMBL:BC007661
EMBL:BC034985 IPI:IPI00293604 IPI:IPI00873841 PIR:JC7387
RefSeq:NP_067076.2 RefSeq:NP_742013.1 UniGene:Hs.413493 PDB:2DID
PDB:2DIF PDB:2ECJ PDBsum:2DID PDBsum:2DIF PDBsum:2ECJ
ProteinModelPortal:Q9HCM9 SMR:Q9HCM9 IntAct:Q9HCM9
MINT:MINT-1433641 STRING:Q9HCM9 PhosphoSite:Q9HCM9 DMDM:56405385
PRIDE:Q9HCM9 DNASU:56658 Ensembl:ENST00000376656
Ensembl:ENST00000376659 Ensembl:ENST00000383601
Ensembl:ENST00000383602 Ensembl:ENST00000383603
Ensembl:ENST00000396547 Ensembl:ENST00000396548
Ensembl:ENST00000396551 Ensembl:ENST00000400644
Ensembl:ENST00000413715 Ensembl:ENST00000414015
Ensembl:ENST00000419790 Ensembl:ENST00000424575
Ensembl:ENST00000426469 Ensembl:ENST00000430502
Ensembl:ENST00000431272 Ensembl:ENST00000433900
Ensembl:ENST00000438076 Ensembl:ENST00000438859
Ensembl:ENST00000440117 Ensembl:ENST00000443109
Ensembl:ENST00000445206 Ensembl:ENST00000446397
Ensembl:ENST00000449318 Ensembl:ENST00000450778
Ensembl:ENST00000451132 Ensembl:ENST00000451715
Ensembl:ENST00000452705 Ensembl:ENST00000458607
Ensembl:ENST00000547030 Ensembl:ENST00000548002
Ensembl:ENST00000549841 Ensembl:ENST00000550282
Ensembl:ENST00000552337 Ensembl:ENST00000552520 GeneID:56658
KEGG:hsa:56658 UCSC:uc003npz.3 UCSC:uc010jrz.3 CTD:56658
GeneCards:GC06P030294 HGNC:HGNC:10065 MIM:605700 neXtProt:NX_Q9HCM9
PharmGKB:PA35535 eggNOG:NOG238084 InParanoid:Q9HCM9 KO:K12015
OMA:KESNRCE EvolutionaryTrace:Q9HCM9 GenomeRNAi:56658 NextBio:62129
ArrayExpress:Q9HCM9 Bgee:Q9HCM9 CleanEx:HS_TRIM39
Genevestigator:Q9HCM9 GermOnline:ENSG00000204599 Uniprot:Q9HCM9
Length = 518
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 56/215 (26%), Positives = 96/215 (44%)
Query: 180 CTLCLKLLYEPITTPCGHSFCRSCL---FQSMDRGNKCPLCRAVLFITPRTCAVSVTLNS 236
C++CL+ L EP+ CGH+FC++C+ ++ ++R CP+CR R+ + L S
Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRY--RSLRPNRQLGS 86
Query: 237 IIQKNFPEEYAERKSEHDSLINFGVDLMPLFVMD----VVIPCQRFPLHIFEPRYRLMVR 292
+++ + +RK +SL + + LF + V + C H L
Sbjct: 87 MVEIAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPLD-D 145
Query: 293 RIMEGNHRMGMVIIDPTTGSVADFACEVEITEC---EPLPDGRFVLEIESRRRFRILRSW 349
E ++ ++P + EIT C E G +ESRR+ +ILR +
Sbjct: 146 ATQEYKEKL-QKCLEPLEQKLQ------EITRCKSSEEKKPGELKRLVESRRQ-QILREF 197
Query: 350 DQDGYRVAEIEWVQDIHPEGVEDRADLQDLTNNAA 384
++ R+ E + V E E++ LQ L NAA
Sbjct: 198 EELHRRLDEEQQVLLSRLEE-EEQDILQRLRENAA 231
>UNIPROTKB|Q9NZS9 [details] [associations]
symbol:BFAR "Bifunctional apoptosis regulator" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=TAS] [GO:0005887 "integral
to plasma membrane" evidence=TAS] [GO:0016020 "membrane"
evidence=IDA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IDA] InterPro:IPR001841 InterPro:IPR001660
PROSITE:PS50089 PROSITE:PS50105 SMART:SM00184 SMART:SM00454
Prosite:PS00518 GO:GO:0006915 GO:GO:0043066 GO:GO:0005887
GO:GO:0005789 GO:GO:0046872 GO:GO:0005198 GO:GO:0008270
EMBL:CH471112 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 InterPro:IPR017907 EMBL:AF173003
EMBL:AK291114 EMBL:BC003054 IPI:IPI00009811 RefSeq:NP_057645.1
UniGene:Hs.435556 ProteinModelPortal:Q9NZS9 SMR:Q9NZS9
IntAct:Q9NZS9 STRING:Q9NZS9 PhosphoSite:Q9NZS9 DMDM:74753089
PRIDE:Q9NZS9 DNASU:51283 Ensembl:ENST00000261658 GeneID:51283
KEGG:hsa:51283 UCSC:uc002dco.3 CTD:51283 GeneCards:GC16P014634
HGNC:HGNC:17613 HPA:HPA045905 neXtProt:NX_Q9NZS9 PharmGKB:PA38460
eggNOG:NOG251630 HOGENOM:HOG000285958 HOVERGEN:HBG056789
InParanoid:Q9NZS9 KO:K15684 OMA:FEDIQQN OrthoDB:EOG4N5VWT
PhylomeDB:Q9NZS9 GenomeRNAi:51283 NextBio:54523 ArrayExpress:Q9NZS9
Bgee:Q9NZS9 CleanEx:HS_BFAR Genevestigator:Q9NZS9
GermOnline:ENSG00000103429 Uniprot:Q9NZS9
Length = 450
Score = 127 (49.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 177 DFDCTLCLKLLYEPITTPCGHSFCRSCL--FQSMDRGNKCPLCRAVLFITPRTCAVSVTL 234
+F C C +L P T CGHSFCR CL + + + +CP CR P+ VS+ L
Sbjct: 31 EFSCHCCYDILVNPTTLNCGHSFCRHCLALWWASSKKTECPECREKWEGFPK---VSILL 87
Query: 235 NSIIQKNFPE 244
I+K FP+
Sbjct: 88 RDAIEKLFPD 97
Score = 39 (18.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 246 YAERKSEHDSLINFGV 261
++ R+SEHD L++ V
Sbjct: 164 WSSRESEHDLLVHKAV 179
>UNIPROTKB|Q1L721 [details] [associations]
symbol:rnf138 "E3 ubiquitin-protein ligase RNF138"
species:8355 "Xenopus laevis" [GO:0019901 "protein kinase binding"
evidence=IPI] [GO:0031624 "ubiquitin conjugating enzyme binding"
evidence=IPI] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0051865 "protein autoubiquitination" evidence=IDA]
InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184
SMART:SM00355 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016055
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042787 GO:GO:0051865
HOVERGEN:HBG074331 CTD:51444 KO:K10668 EMBL:DQ011285
RefSeq:NP_001089974.1 UniGene:Xl.52927 ProteinModelPortal:Q1L721
GeneID:735045 KEGG:xla:735045 Xenbase:XB-GENE-1001378
Uniprot:Q1L721
Length = 222
Score = 118 (46.6 bits), Expect = 0.00012, P = 0.00012
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 173 ERTDDFDCTLCLKLLYEPITTP-CGHSFCRSCLFQSMDRGNK-CPLCRAVLFITPRTCAV 230
E T++F C +C ++L P+ T C H FCR C +M G CPLCR + + R+ V
Sbjct: 10 EITEEFLCPVCQEILQTPVRTQTCRHVFCRKCFMLAMKSGGAYCPLCRGPVNKSERSAPV 69
Query: 231 SVT 233
T
Sbjct: 70 RAT 72
>UNIPROTKB|A5PJN7 [details] [associations]
symbol:BFAR "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001660 PROSITE:PS50089 PROSITE:PS50105 SMART:SM00184
SMART:SM00454 Prosite:PS00518 GO:GO:0016020 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 InterPro:IPR017907 CTD:51283
eggNOG:NOG251630 HOGENOM:HOG000285958 HOVERGEN:HBG056789 KO:K15684
OMA:FEDIQQN OrthoDB:EOG4N5VWT GeneTree:ENSGT00390000005386
EMBL:DAAA02057541 EMBL:BC142184 IPI:IPI00698967
RefSeq:NP_001092339.1 UniGene:Bt.9581 SMR:A5PJN7
Ensembl:ENSBTAT00000028683 GeneID:504902 KEGG:bta:504902
InParanoid:A5PJN7 NextBio:20866887 Uniprot:A5PJN7
Length = 450
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 25/71 (35%), Positives = 38/71 (53%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCL--FQSMDRGNKCPLCRAVLFITPRTCAVSVT 233
++F C C +L P T CGHSFCR CL + + + +CP CR P+ V++
Sbjct: 30 NEFSCHCCYDILVNPTTLNCGHSFCRHCLALWWASSKKTECPECREKWEGFPK---VNIL 86
Query: 234 LNSIIQKNFPE 244
L ++K FP+
Sbjct: 87 LRDAVEKLFPD 97
>ZFIN|ZDB-GENE-080215-17 [details] [associations]
symbol:ftr50 "finTRIM family, member 50"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-080215-17
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 OrthoDB:EOG4R23TJ
HOGENOM:HOG000234136 HOVERGEN:HBG106862 EMBL:BC154751
IPI:IPI00859163 RefSeq:NP_001108183.1 UniGene:Dr.114073
ProteinModelPortal:A8WGK6 GeneID:100137114 KEGG:dre:100137114
CTD:100137114 eggNOG:NOG319664 NextBio:20789406 Uniprot:A8WGK6
Length = 456
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 26/71 (36%), Positives = 38/71 (53%)
Query: 176 DDFDCTLCLKLLYEPITTPCGHSFCRSCLF-----QSMDRGNKCPLCRAVLFITPRTC-A 229
+ F C +C LL +P+T PCGHS+C SC+ + R CPLC+ TPR A
Sbjct: 11 NQFKCPVCPNLLQDPVTIPCGHSYCMSCITDCWNQEEQKRIYSCPLCKQSF--TPRPALA 68
Query: 230 VSVTLNSIIQK 240
+V +++K
Sbjct: 69 KNVVFAEMLEK 79
WARNING: HSPs involving 178 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.137 0.419 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 469 435 0.00087 118 3 11 22 0.50 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 428
No. of states in DFA: 621 (66 KB)
Total size of DFA: 286 KB (2149 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.45u 0.17s 38.62t Elapsed: 00:00:02
Total cpu time: 38.48u 0.17s 38.65t Elapsed: 00:00:02
Start: Thu May 9 17:07:02 2013 End: Thu May 9 17:07:04 2013
WARNINGS ISSUED: 2