BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012164
(469 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 97/267 (36%), Positives = 142/267 (53%), Gaps = 23/267 (8%)
Query: 166 GTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM 225
GT A W G VAVK L E+ + RV F E+A+++++RHPN+V F+GAVTQ +
Sbjct: 51 GTVHRAEWHGSDVAVKILMEQDFHAE-RVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL 109
Query: 226 MIVTEYLPKGDLRAFLKRKGA---LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
IVTEYL +G L L + GA L + A D+A+GMNYLH P PI+HRDL+
Sbjct: 110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP-PIVHRDLK-- 166
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSC--RYVAPEVFKNE 340
N+L D +KV DFG+S+L K L + + ++APEV ++E
Sbjct: 167 ---------SPNLLVDKKYTVKVCDFGLSRL---KASXFLXSKXAAGTPEWMAPEVLRDE 214
Query: 341 EYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELI 400
+ K DV+SF +IL E+ P+ + +V A + + + P L + + +I
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCK-RLEIPRNLNPQ-VAAII 272
Query: 401 EECWNEKPAKRPTFRQIITRLESINNS 427
E CW +P KRP+F I+ L + S
Sbjct: 273 EGCWTNEPWKRPSFATIMDLLRPLIKS 299
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 143/267 (53%), Gaps = 23/267 (8%)
Query: 166 GTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM 225
GT A W G VAVK L E+ + RV F E+A+++++RHPN+V F+GAVTQ +
Sbjct: 51 GTVHRAEWHGSDVAVKILMEQDFHAE-RVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL 109
Query: 226 MIVTEYLPKGDLRAFLKRKGA---LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
IVTEYL +G L L + GA L + A D+A+GMNYLH P PI+HR+L+
Sbjct: 110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP-PIVHRNLK-- 166
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSC--RYVAPEVFKNE 340
N+L D +KV DFG+S+L K L+ + + ++APEV ++E
Sbjct: 167 ---------SPNLLVDKKYTVKVCDFGLSRL---KASTFLSSKSAAGTPEWMAPEVLRDE 214
Query: 341 EYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELI 400
+ K DV+SF +IL E+ P+ + +V A + + + P L + + +I
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCK-RLEIPRNLNPQ-VAAII 272
Query: 401 EECWNEKPAKRPTFRQIITRLESINNS 427
E CW +P KRP+F I+ L + S
Sbjct: 273 EGCWTNEPWKRPSFATIMDLLRPLIKS 299
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 146/289 (50%), Gaps = 33/289 (11%)
Query: 147 EYEIDPHELDFTNSVEITKGTFIL---AFWRGI-QVAVKKLGEEVISDDDRVRAFRDELA 202
++ IDP EL F EI G F L +W +VA+K + E +S++D F +E
Sbjct: 2 KWVIDPSELTFVQ--EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----FIEEAE 55
Query: 203 LLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDIAR 261
++ K+ HP +VQ G + +P+ +VTE++ G L +L+ ++G T + LD+
Sbjct: 56 VMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 115
Query: 262 GMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRP 321
GM YL E +IHRDL RN L ++ +KV+DFG+++ + +
Sbjct: 116 GMAYLEE---ACVIHRDLAA-----------RNCLVGENQVIKVSDFGMTRFVLDDQYTS 161
Query: 322 LTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPK--AYA 378
T ++ +PEVF Y +K DV+SF +++ E+ EG P+ + ++EV + +
Sbjct: 162 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 221
Query: 379 ARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
R P A +Y +++ CW E+P RP F +++ +L I S
Sbjct: 222 FRLYKPRLASTHVY-----QIMNHCWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 143/286 (50%), Gaps = 33/286 (11%)
Query: 150 IDPHELDFTNSVEITKGTFIL---AFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQ 205
IDP EL F EI G F L +W +VA+K + E +S+DD F +E ++
Sbjct: 24 IDPSELTFVQ--EIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDD----FIEEAEVMM 77
Query: 206 KIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDIARGMN 264
K+ HP +VQ G + +P+ +V E++ G L +L+ ++G T + LD+ GM
Sbjct: 78 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA 137
Query: 265 YLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTC 324
YL E +IHRDL RN L ++ +KV+DFG+++ + + T
Sbjct: 138 YLEE---ACVIHRDLAA-----------RNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 183
Query: 325 QDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPK--AYAARQ 381
++ +PEVF Y +K DV+SF +++ E+ EG P+ + ++EV + + R
Sbjct: 184 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRL 243
Query: 382 RPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
P A +Y +++ CW E+P RP F +++ +L I S
Sbjct: 244 YKPRLASTHVY-----QIMNHCWKERPEDRPAFSRLLRQLAEIAES 284
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 144/286 (50%), Gaps = 33/286 (11%)
Query: 150 IDPHELDFTNSVEITKGTFIL---AFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQ 205
IDP EL F EI G F L +W +VA+K + E +S++D F +E ++
Sbjct: 4 IDPSELTFVQ--EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----FIEEAEVMM 57
Query: 206 KIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDIARGMN 264
K+ HP +VQ G + +P+ +V E++ G L +L+ ++G T + LD+ GM
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA 117
Query: 265 YLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTC 324
YL E +IHRDL RN L ++ +KV+DFG+++ + + T
Sbjct: 118 YLEE---ASVIHRDLAA-----------RNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 163
Query: 325 QDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPK--AYAARQ 381
++ +PEVF Y +K DV+SF +++ E+ EG P+ + ++EV + + R
Sbjct: 164 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRL 223
Query: 382 RPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
P A +Y +++ CW E+P RP F +++ +L +I S
Sbjct: 224 YKPRLASTHVY-----QIMNHCWKERPEDRPAFSRLLRQLAAIAAS 264
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 145/289 (50%), Gaps = 33/289 (11%)
Query: 147 EYEIDPHELDFTNSVEITKGTFIL---AFWRGI-QVAVKKLGEEVISDDDRVRAFRDELA 202
++ IDP EL F EI G F L +W +VA+K + E +S++D F +E
Sbjct: 4 KWVIDPSELTFVQ--EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----FIEEAE 57
Query: 203 LLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDIAR 261
++ K+ HP +VQ G + +P+ +V E++ G L +L+ ++G T + LD+
Sbjct: 58 VMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 117
Query: 262 GMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRP 321
GM YL E +IHRDL RN L ++ +KV+DFG+++ + +
Sbjct: 118 GMAYLEE---ACVIHRDLAA-----------RNCLVGENQVIKVSDFGMTRFVLDDQYTS 163
Query: 322 LTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPK--AYA 378
T ++ +PEVF Y +K DV+SF +++ E+ EG P+ + ++EV + +
Sbjct: 164 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 223
Query: 379 ARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
R P A +Y +++ CW E+P RP F +++ +L I S
Sbjct: 224 FRLYKPRLASTHVY-----QIMNHCWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 143/286 (50%), Gaps = 33/286 (11%)
Query: 150 IDPHELDFTNSVEITKGTFIL---AFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQ 205
IDP EL F EI G F L +W +VA+K + E +S++D F +E ++
Sbjct: 4 IDPSELTFVQ--EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----FIEEAEVMM 57
Query: 206 KIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDIARGMN 264
K+ HP +VQ G + +P+ +V E++ G L +L+ ++G T + LD+ GM
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA 117
Query: 265 YLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTC 324
YL E +IHRDL RN L ++ +KV+DFG+++ + + T
Sbjct: 118 YLEE---ACVIHRDLAA-----------RNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 163
Query: 325 QDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPK--AYAARQ 381
++ +PEVF Y +K DV+SF +++ E+ EG P+ + ++EV + + R
Sbjct: 164 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRL 223
Query: 382 RPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
P A +Y +++ CW E+P RP F +++ +L I S
Sbjct: 224 YKPRLASTHVY-----QIMNHCWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 143/286 (50%), Gaps = 33/286 (11%)
Query: 150 IDPHELDFTNSVEITKGTFIL---AFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQ 205
IDP EL F EI G F L +W +VA+K + E +S++D F +E ++
Sbjct: 2 IDPSELTFVQ--EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----FIEEAEVMM 55
Query: 206 KIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDIARGMN 264
K+ HP +VQ G + +P+ +V E++ G L +L+ ++G T + LD+ GM
Sbjct: 56 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA 115
Query: 265 YLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTC 324
YL E +IHRDL RN L ++ +KV+DFG+++ + + T
Sbjct: 116 YLEE---ACVIHRDLAA-----------RNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 161
Query: 325 QDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPK--AYAARQ 381
++ +PEVF Y +K DV+SF +++ E+ EG P+ + ++EV + + R
Sbjct: 162 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRL 221
Query: 382 RPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
P A +Y +++ CW E+P RP F +++ +L I S
Sbjct: 222 YKPRLASTHVY-----QIMNHCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 140/272 (51%), Gaps = 32/272 (11%)
Query: 166 GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G L W+G VAVK + E +S+D+ F E + K+ HP +V+F G ++ P
Sbjct: 22 GVVKLGKWKGQYDVAVKMIKEGSMSEDE----FFQEAQTMMKLSHPKLVKFYGVCSKEYP 77
Query: 225 MMIVTEYLPKGDLRAFLKRKG-ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSD 283
+ IVTEY+ G L +L+ G L+PS + D+ GM +L ++ IHRDL
Sbjct: 78 IYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAA-- 132
Query: 284 LYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS--CRYVAPEVFKNEE 341
RN L D +KV+DFG+++ V +D+ ++ T ++ APEVF +
Sbjct: 133 ---------RNCLVDRDLCVKVSDFGMTRY--VLDDQYVSSVGTKFPVKWSAPEVFHYFK 181
Query: 342 YDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAARQR--PPFKAPAKLYARGLKE 398
Y +K DV++F +++ E+ G P+ + ++EV + R P A +Y +
Sbjct: 182 YSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIY-----Q 236
Query: 399 LIEECWNEKPAKRPTFRQIITRLESINNSINH 430
++ CW+E P KRPTF+Q+++ +E + H
Sbjct: 237 IMYSCWHELPEKRPTFQQLLSSIEPLREKDKH 268
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 136/272 (50%), Gaps = 33/272 (12%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L + I VA+K L +V + + R F E +++ + HPN+++ G VT+
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 222 SSPMMIVTEYLPKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S P+MIVTEY+ G L +FL++ A V IA GM YL + + +HRDL
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGFVHRDLA 174
Query: 281 PSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPE 335
RNIL + + KV+DFG+S++L ED P T R+ +PE
Sbjct: 175 A-----------RNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPIRWTSPE 220
Query: 336 VFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLY 392
++ + DV+S+ ++L E++ G P+ + +V KA R PP PA LY
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY 280
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+L+ +CW + RP F QI++ L+ +
Sbjct: 281 -----QLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 136/272 (50%), Gaps = 33/272 (12%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L + I VA+K L +V + + R F E +++ + HPN+++ G VT+
Sbjct: 58 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 115
Query: 222 SSPMMIVTEYLPKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S P+MIVTEY+ G L +FL++ A V IA GM YL + + +HRDL
Sbjct: 116 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 172
Query: 281 PSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPE 335
RNIL + + KV+DFG+S++L ED P T R+ +PE
Sbjct: 173 A-----------RNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPIRWTSPE 218
Query: 336 VFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLY 392
++ + DV+S+ ++L E++ G P+ + +V KA R PP PA LY
Sbjct: 219 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY 278
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+L+ +CW + RP F QI++ L+ +
Sbjct: 279 -----QLMLDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 136/272 (50%), Gaps = 33/272 (12%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L + I VA+K L +V + + R F E +++ + HPN+++ G VT+
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 222 SSPMMIVTEYLPKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S P+MIVTEY+ G L +FL++ A V IA GM YL + + +HRDL
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 174
Query: 281 PSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPE 335
RNIL + + KV+DFG+S++L ED P T R+ +PE
Sbjct: 175 A-----------RNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPIRWTSPE 220
Query: 336 VFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLY 392
++ + DV+S+ ++L E++ G P+ + +V KA R PP PA LY
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY 280
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+L+ +CW + RP F QI++ L+ +
Sbjct: 281 -----QLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 136/272 (50%), Gaps = 33/272 (12%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L + I VA+K L +V + + R F E +++ + HPN+++ G VT+
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 222 SSPMMIVTEYLPKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S P+MIVTEY+ G L +FL++ A V IA GM YL + + +HRDL
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 174
Query: 281 PSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPE 335
RNIL + + KV+DFG+S++L ED P T R+ +PE
Sbjct: 175 A-----------RNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPIRWTSPE 220
Query: 336 VFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLY 392
++ + DV+S+ ++L E++ G P+ + +V KA R PP PA LY
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY 280
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+L+ +CW + RP F QI++ L+ +
Sbjct: 281 -----QLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 136/283 (48%), Gaps = 21/283 (7%)
Query: 149 EIDPHELDFTNSVEITK-GTFILAFWRGIQVAVKKLGEEVISD-DDRVRAFRDELALLQK 206
EID EL + I G AFW G +VAVK + D + R E L
Sbjct: 3 EIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAM 62
Query: 207 IRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++HPN++ G + + +V E+ G L L K + P V +A+ IARGMNYL
Sbjct: 63 LKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK-RIPPDILVNWAVQIARGMNYL 121
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGN--LKVADFGVSKLLTVKEDRPLTC 324
H+ VPIIHRDL+ S++ + + + D N LK+ DFG++ +E T
Sbjct: 122 HDEAIVPIIHRDLKSSNILIL-----QKVENGDLSNKILKITDFGLA-----REWHRTTK 171
Query: 325 QDTSCRY--VAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYA-ARQ 381
+ Y +APEV + + DV+S+ ++L E++ G PF + + + AY A
Sbjct: 172 MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF--RGIDGLAVAYGVAMN 229
Query: 382 RPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+ P+ +L+E+CWN P RP+F I+ +L +I
Sbjct: 230 KLALPIPSTC-PEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 136/272 (50%), Gaps = 33/272 (12%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L + I VA+K L +V + + R F E +++ + HPN+++ G VT+
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 222 SSPMMIVTEYLPKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S P+MIVTEY+ G L +FL++ A V IA GM YL + + +HRDL
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 174
Query: 281 PSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPE 335
RNIL + + KV+DFG+S++L ED P T R+ +PE
Sbjct: 175 A-----------RNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPIRWTSPE 220
Query: 336 VFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLY 392
++ + DV+S+ ++L E++ G P+ + +V KA R PP PA LY
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY 280
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+L+ +CW + RP F QI++ L+ +
Sbjct: 281 -----QLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 136/272 (50%), Gaps = 33/272 (12%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L + I VA+K L +V + + R F E +++ + HPN+++ G VT+
Sbjct: 31 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 88
Query: 222 SSPMMIVTEYLPKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S P+MIVTEY+ G L +FL++ A V IA GM YL + + +HRDL
Sbjct: 89 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 145
Query: 281 PSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPE 335
RNIL + + KV+DFG+S++L ED P T R+ +PE
Sbjct: 146 A-----------RNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPIRWTSPE 191
Query: 336 VFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLY 392
++ + DV+S+ ++L E++ G P+ + +V KA R PP PA LY
Sbjct: 192 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY 251
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+L+ +CW + RP F QI++ L+ +
Sbjct: 252 -----QLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 136/272 (50%), Gaps = 33/272 (12%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L + I VA+K L +V + + R F E +++ + HPN+++ G VT+
Sbjct: 48 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 105
Query: 222 SSPMMIVTEYLPKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S P+MIVTEY+ G L +FL++ A V IA GM YL + + +HRDL
Sbjct: 106 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 162
Query: 281 PSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPE 335
RNIL + + KV+DFG+S++L ED P T R+ +PE
Sbjct: 163 A-----------RNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPIRWTSPE 208
Query: 336 VFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLY 392
++ + DV+S+ ++L E++ G P+ + +V KA R PP PA LY
Sbjct: 209 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY 268
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+L+ +CW + RP F QI++ L+ +
Sbjct: 269 -----QLMLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 136/272 (50%), Gaps = 33/272 (12%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L + I VA+K L +V + + R F E +++ + HPN+++ G VT+
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 222 SSPMMIVTEYLPKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S P+MIVTEY+ G L +FL++ A V IA GM YL + + +HRDL
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 174
Query: 281 PSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPE 335
RNIL + + KV+DFG+S++L ED P T R+ +PE
Sbjct: 175 A-----------RNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPIRWTSPE 220
Query: 336 VFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLY 392
++ + DV+S+ ++L E++ G P+ + +V KA R PP PA LY
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY 280
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+L+ +CW + RP F QI++ L+ +
Sbjct: 281 -----QLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 139/280 (49%), Gaps = 43/280 (15%)
Query: 163 ITKGTF---ILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAV 219
I KG F +L +RG +VAVK I +D +AF E +++ ++RH N+VQ LG +
Sbjct: 29 IGKGEFGDVMLGDYRGNKVAVK-----CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 220 T-QSSPMMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
+ + IVTEY+ KG L +L+ +G L ++F+LD+ M YL N +H
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 140
Query: 277 RDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVA 333
RDL RN+L + KV+DFG++K + QDT ++ A
Sbjct: 141 RDLAA-----------RNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTA 182
Query: 334 PEVFKNEEYDTKVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAYAA-RQRPPFKAPAK 390
PE + +++ TK DV+SF ++L E+ G P+ + + VP+ + P P
Sbjct: 183 PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPA 242
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSINH 430
+Y E+++ CW+ A RP+F Q+ +LE I H
Sbjct: 243 VY-----EVMKNCWHLDAAMRPSFLQLREQLEHIKTHELH 277
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 139/280 (49%), Gaps = 43/280 (15%)
Query: 163 ITKGTF---ILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAV 219
I KG F +L +RG +VAVK I +D +AF E +++ ++RH N+VQ LG +
Sbjct: 14 IGKGEFGDVMLGDYRGNKVAVK-----CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 220 T-QSSPMMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
+ + IVTEY+ KG L +L+ +G L ++F+LD+ M YL N +H
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 125
Query: 277 RDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVA 333
RDL RN+L + KV+DFG++K + QDT ++ A
Sbjct: 126 RDLAA-----------RNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTA 167
Query: 334 PEVFKNEEYDTKVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAYAA-RQRPPFKAPAK 390
PE + +++ TK DV+SF ++L E+ G P+ + + VP+ + P P
Sbjct: 168 PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPA 227
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSINH 430
+Y E+++ CW+ A RP+F Q+ +LE I H
Sbjct: 228 VY-----EVMKNCWHLDAAMRPSFLQLREQLEHIKTHELH 262
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 138/274 (50%), Gaps = 43/274 (15%)
Query: 163 ITKGTF---ILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAV 219
I KG F +L +RG +VAVK I +D +AF E +++ ++RH N+VQ LG +
Sbjct: 201 IGKGEFGDVMLGDYRGNKVAVK-----CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 220 T-QSSPMMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
+ + IVTEY+ KG L +L+ +G L ++F+LD+ M YL N +H
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 312
Query: 277 RDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVA 333
RDL RN+L + KV+DFG++K + QDT ++ A
Sbjct: 313 RDLAA-----------RNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTA 354
Query: 334 PEVFKNEEYDTKVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAYAA-RQRPPFKAPAK 390
PE + +++ TK DV+SF ++L E+ G P+ + + VP+ + P P
Sbjct: 355 PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPA 414
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+Y ++++ CW+ A RPTF Q+ +LE I
Sbjct: 415 VY-----DVMKNCWHLDAATRPTFLQLREQLEHI 443
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 136/272 (50%), Gaps = 33/272 (12%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L + I VA+K L +V + + R F E +++ + HPN+++ G VT+
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 222 SSPMMIVTEYLPKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S P+MIVTEY+ G L +FL++ A V IA GM YL + + +HRDL
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 174
Query: 281 PSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPE 335
RNIL + + KV+DFG++++L ED P T R+ +PE
Sbjct: 175 A-----------RNILINSNLVCKVSDFGLARVL---EDDPEAAYTTRGGKIPIRWTSPE 220
Query: 336 VFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLY 392
++ + DV+S+ ++L E++ G P+ + +V KA R PP PA LY
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY 280
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+L+ +CW + RP F QI++ L+ +
Sbjct: 281 -----QLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 135/272 (49%), Gaps = 33/272 (12%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L + I VA+K L +V + + R F E +++ + HPN+++ G VT+
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 222 SSPMMIVTEYLPKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S P+MIVTEY+ G L +FL++ A V IA GM YL + + +HRDL
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 174
Query: 281 PSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPE 335
RNIL + + KV+DFG+ ++L ED P T R+ +PE
Sbjct: 175 A-----------RNILINSNLVCKVSDFGLGRVL---EDDPEAAYTTRGGKIPIRWTSPE 220
Query: 336 VFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLY 392
++ + DV+S+ ++L E++ G P+ + +V KA R PP PA LY
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY 280
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+L+ +CW + RP F QI++ L+ +
Sbjct: 281 -----QLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 136/274 (49%), Gaps = 43/274 (15%)
Query: 163 ITKGTF---ILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAV 219
I KG F +L +RG +VAVK I +D +AF E +++ ++RH N+VQ LG +
Sbjct: 20 IGKGEFGDVMLGDYRGNKVAVK-----CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 220 T-QSSPMMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
+ + IVTEY+ KG L +L+ +G L ++F+LD+ M YL N +H
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 131
Query: 277 RDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVA 333
RDL RN+L + KV+DFG++K + QDT ++ A
Sbjct: 132 RDLAA-----------RNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTA 173
Query: 334 PEVFKNEEYDTKVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAYAA-RQRPPFKAPAK 390
PE + + TK DV+SF ++L E+ G P+ + + VP+ + P P
Sbjct: 174 PEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPA 233
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+Y E+++ CW+ A RP+F Q+ +LE I
Sbjct: 234 VY-----EVMKNCWHLDAAMRPSFLQLREQLEHI 262
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 135/272 (49%), Gaps = 33/272 (12%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L + I VA+K L +V + + R F E +++ + HPN+++ G VT+
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 222 SSPMMIVTEYLPKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S P+MIVTE + G L +FL++ A V IA GM YL + + +HRDL
Sbjct: 118 SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 174
Query: 281 PSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPE 335
RNIL + + KV+DFG+S++L ED P T R+ +PE
Sbjct: 175 A-----------RNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPIRWTSPE 220
Query: 336 VFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLY 392
++ + DV+S+ ++L E++ G P+ + +V KA R PP PA LY
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY 280
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+L+ +CW + RP F QI++ L+ +
Sbjct: 281 -----QLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 135/272 (49%), Gaps = 33/272 (12%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L + I VA+K L +V + + R F E +++ + HPN+++ G VT+
Sbjct: 31 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 88
Query: 222 SSPMMIVTEYLPKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S P+MIVTE + G L +FL++ A V IA GM YL + + +HRDL
Sbjct: 89 SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 145
Query: 281 PSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPE 335
RNIL + + KV+DFG+S++L ED P T R+ +PE
Sbjct: 146 A-----------RNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPIRWTSPE 191
Query: 336 VFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLY 392
++ + DV+S+ ++L E++ G P+ + +V KA R PP PA LY
Sbjct: 192 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY 251
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+L+ +CW + RP F QI++ L+ +
Sbjct: 252 -----QLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 135/272 (49%), Gaps = 33/272 (12%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L + I VA+K L +V + + R F E +++ + HPN+++ G VT+
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 222 SSPMMIVTEYLPKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S P+MIVTE + G L +FL++ A V IA GM YL + + +HRDL
Sbjct: 118 SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGAVHRDLA 174
Query: 281 PSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPE 335
RNIL + + KV+DFG+S++L ED P T R+ +PE
Sbjct: 175 A-----------RNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPIRWTSPE 220
Query: 336 VFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLY 392
++ + DV+S+ ++L E++ G P+ + +V KA R PP PA LY
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY 280
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+L+ +CW + RP F QI++ L+ +
Sbjct: 281 -----QLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 136/281 (48%), Gaps = 33/281 (11%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G + R I VA+K L + D + R F E +++ + HPN++ G VT+
Sbjct: 23 EVCSGRLKVPGKREICVAIKTL--KAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTK 80
Query: 222 SSPMMIVTEYLPKGDLRAFLKRK-GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
P+MI+TEY+ G L AFL++ G V I GM YL + + +HRDL
Sbjct: 81 CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---MSYVHRDLA 137
Query: 281 PSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPE 335
RNIL + + KV+DFG+S++L ED P T R+ APE
Sbjct: 138 A-----------RNILVNSNLVCKVSDFGMSRVL---EDDPEAAYTTRGGKIPIRWTAPE 183
Query: 336 VFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLY 392
++ + DV+S+ +++ E++ G P+ + +V KA R PP P L+
Sbjct: 184 AIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALH 243
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESINNSINHKRR 433
+L+ +CW ++ + RP F QI+ L+ + + N +R
Sbjct: 244 -----QLMLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLKR 279
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 136/281 (48%), Gaps = 33/281 (11%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G + R I VA+K L + D + R F E +++ + HPN++ G VT+
Sbjct: 29 EVCSGRLKVPGKREICVAIKTL--KAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTK 86
Query: 222 SSPMMIVTEYLPKGDLRAFLKRK-GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
P+MI+TEY+ G L AFL++ G V I GM YL + + +HRDL
Sbjct: 87 CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---MSYVHRDLA 143
Query: 281 PSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPE 335
RNIL + + KV+DFG+S++L ED P T R+ APE
Sbjct: 144 A-----------RNILVNSNLVCKVSDFGMSRVL---EDDPEAAYTTRGGKIPIRWTAPE 189
Query: 336 VFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLY 392
++ + DV+S+ +++ E++ G P+ + +V KA R PP P L+
Sbjct: 190 AIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALH 249
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESINNSINHKRR 433
+L+ +CW ++ + RP F QI+ L+ + + N +R
Sbjct: 250 -----QLMLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLKR 285
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 136/281 (48%), Gaps = 33/281 (11%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G + R I VA+K L + D + R F E +++ + HPN++ G VT+
Sbjct: 44 EVCSGRLKVPGKREICVAIKTL--KAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTK 101
Query: 222 SSPMMIVTEYLPKGDLRAFLKRK-GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
P+MI+TEY+ G L AFL++ G V I GM YL + + +HRDL
Sbjct: 102 CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---MSAVHRDLA 158
Query: 281 PSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPE 335
RNIL + + KV+DFG+S++L ED P T R+ APE
Sbjct: 159 A-----------RNILVNSNLVCKVSDFGMSRVL---EDDPEAAYTTRGGKIPIRWTAPE 204
Query: 336 VFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLY 392
++ + DV+S+ +++ E++ G P+ + +V KA R PP P L+
Sbjct: 205 AIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALH 264
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESINNSINHKRR 433
+L+ +CW ++ + RP F QI+ L+ + + N +R
Sbjct: 265 -----QLMLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLKR 300
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 138/275 (50%), Gaps = 29/275 (10%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L R + VA+K L +V + + R F E +++ + HPNVV G VT+
Sbjct: 58 EVCSGRLKLPGKRDVAVAIKTL--KVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTR 115
Query: 222 SSPMMIVTEYLPKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
P+MIV E++ G L AFL K G V IA GM YL + + +HRDL
Sbjct: 116 GKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLAD---MGYVHRDLA 172
Query: 281 PSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPE 335
RNIL + + KV+DFG+S+++ ED P T+ R+ APE
Sbjct: 173 A-----------RNILVNSNLVCKVSDFGLSRVI---EDDPEAVYTTTGGKIPVRWTAPE 218
Query: 336 VFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYAR 394
+ ++ + DV+S+ +++ E++ G P+ + +V KA R P AP A
Sbjct: 219 AIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLP--APMDCPA- 275
Query: 395 GLKELIEECWNEKPAKRPTFRQIITRLESINNSIN 429
GL +L+ +CW ++ A+RP F QI+ L+ + + N
Sbjct: 276 GLHQLMLDCWQKERAERPKFEQIVGILDKMIRNPN 310
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 126/269 (46%), Gaps = 36/269 (13%)
Query: 166 GTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS 223
G + W+ + VAVK L E D V F E A++++I+HPN+VQ LG T
Sbjct: 46 GEVYVGVWKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEP 101
Query: 224 PMMIVTEYLPKGDLRAFLKRKGALKPSTAV---RFALDIARGMNYLHENKPVPIIHRDLE 280
P IVTEY+P G+L +L R+ + TAV A I+ M YL + IHRDL
Sbjct: 102 PFYIVTEYMPYGNLLDYL-RECNREEVTAVVLLYMATQISSAMEYLEKKN---FIHRDLA 157
Query: 281 PSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNE 340
RN L ++ +KVADFG+S+L+T ++ APE
Sbjct: 158 A-----------RNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 206
Query: 341 EYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRPPFKAPAKLYARG 395
+ K DV++F ++L E+ G P+ ++V K Y R P P K+Y
Sbjct: 207 TFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGY--RMEQPEGCPPKVY--- 261
Query: 396 LKELIEECWNEKPAKRPTFRQIITRLESI 424
EL+ CW PA RP+F + E++
Sbjct: 262 --ELMRACWKWSPADRPSFAETHQAFETM 288
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 133/272 (48%), Gaps = 33/272 (12%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L R + VA+K L +V + + R F E +++ + HPN++ G VT+
Sbjct: 37 EVCSGRLKLPGKRELPVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTK 94
Query: 222 SSPMMIVTEYLPKGDLRAFLKRK-GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S P+MIVTEY+ G L FLK+ G V I+ GM YL + + +HRDL
Sbjct: 95 SKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSD---MGYVHRDLA 151
Query: 281 PSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPE 335
RNIL + + KV+DFG+S++L ED P T R+ APE
Sbjct: 152 A-----------RNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPIRWTAPE 197
Query: 336 VFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLY 392
++ + DV+S+ +++ E++ G P+ + +V KA R P PA LY
Sbjct: 198 AIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPMDCPAALY 257
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+L+ +CW ++ RP F +I+ L+ +
Sbjct: 258 -----QLMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 138/282 (48%), Gaps = 33/282 (11%)
Query: 148 YEIDPHELDFTNSVEITKGTF-ILAF--WRG-IQVAVKKLGEEVISDDDRVRAFRDELAL 203
+EIDP +L F E+ G F ++ + WRG VA+K + E +S+D+ F +E +
Sbjct: 19 WEIDPKDLTFLK--ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKV 72
Query: 204 LQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR-KGALKPSTAVRFALDIARG 262
+ + H +VQ G T+ P+ I+TEY+ G L +L+ + + + D+
Sbjct: 73 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 132
Query: 263 MNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPL 322
M YL + +HRDL RN L +D G +KV+DFG+S+ + E+
Sbjct: 133 MEYLESKQ---FLHRDLAA-----------RNCLVNDQGVVKVSDFGLSRYVLDDEETSS 178
Query: 323 TCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAA 379
R+ PEV ++ +K D+++F +++ E+ G P+ ++E + A
Sbjct: 179 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 238
Query: 380 RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRL 421
R P A K+Y ++ CW+EK +RPTF+ +++ +
Sbjct: 239 RLYRPHLASEKVYT-----IMYSCWHEKADERPTFKILLSNI 275
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 122/258 (47%), Gaps = 29/258 (11%)
Query: 166 GTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM 225
G A WR VA+K+ I + +AF EL L ++ HPN+V+ GA +P+
Sbjct: 22 GVVCKAKWRAKDVAIKQ-----IESESERKAFIVELRQLSRVNHPNIVKLYGACL--NPV 74
Query: 226 MIVTEYLPKGDLRAFLKRKGALKPSTA---VRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+V EY G L L L TA + + L ++G+ YLH +P +IHRDL+P
Sbjct: 75 CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPP 134
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY 342
+L +L LK+ DFG + + +T S ++APEVF+ Y
Sbjct: 135 NL----------LLVAGGTVLKICDFGTACDIQTH----MTNNKGSAAWMAPEVFEGSNY 180
Query: 343 DTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQ--RPPFKAPAKLYARGLKELI 400
K DVFS+ +IL E+I PF +A RPP K + ++ L+
Sbjct: 181 SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPL---IKNLPKPIESLM 237
Query: 401 EECWNEKPAKRPTFRQII 418
CW++ P++RP+ +I+
Sbjct: 238 TRCWSKDPSQRPSMEEIV 255
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 122/258 (47%), Gaps = 29/258 (11%)
Query: 166 GTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM 225
G A WR VA+K+ I + +AF EL L ++ HPN+V+ GA +P+
Sbjct: 23 GVVCKAKWRAKDVAIKQ-----IESESERKAFIVELRQLSRVNHPNIVKLYGACL--NPV 75
Query: 226 MIVTEYLPKGDLRAFLKRKGALKPSTA---VRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+V EY G L L L TA + + L ++G+ YLH +P +IHRDL+P
Sbjct: 76 CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPP 135
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY 342
+L +L LK+ DFG + + +T S ++APEVF+ Y
Sbjct: 136 NL----------LLVAGGTVLKICDFGTACDIQTH----MTNNKGSAAWMAPEVFEGSNY 181
Query: 343 DTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQ--RPPFKAPAKLYARGLKELI 400
K DVFS+ +IL E+I PF +A RPP K + ++ L+
Sbjct: 182 SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPL---IKNLPKPIESLM 238
Query: 401 EECWNEKPAKRPTFRQII 418
CW++ P++RP+ +I+
Sbjct: 239 TRCWSKDPSQRPSMEEIV 256
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 136/280 (48%), Gaps = 47/280 (16%)
Query: 171 AFWRGIQVAVKKLGEEVIS------DDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
F + I+V ++ GE ++ D++ R F E+ +++ + HPNV++F+G + +
Sbjct: 22 CFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKR 81
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKP-STAVRFALDIARGMNYLHENKPVPIIHRDLEPSD 283
+ +TEY+ G LR +K + P S V FA DIA GM YLH + IIHRDL
Sbjct: 82 LNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDL---- 134
Query: 284 LYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRP-----LTCQDTSCRY------- 331
N N L ++ N+ VADFG+++L+ ++ +P L D RY
Sbjct: 135 -------NSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPY 187
Query: 332 -VAPEVFKNEEYDTKVDVFSFALILQEMIEGCP------PFTMKHDNEVPKAYAARQRPP 384
+APE+ YD KVDVFSF ++L E+I P TM V + + R PP
Sbjct: 188 WMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNV-RGFLDRYCPP 246
Query: 385 FKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
P + + C + P KRP+F ++ LE++
Sbjct: 247 -NCPPSFFP-----ITVRCCDLDPEKRPSFVKLEHWLETL 280
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 137/282 (48%), Gaps = 33/282 (11%)
Query: 148 YEIDPHELDFTNSVEITKGTF-ILAF--WRG-IQVAVKKLGEEVISDDDRVRAFRDELAL 203
+EIDP +L F E+ G F ++ + WRG VA+K + E +S+D+ F +E +
Sbjct: 3 WEIDPKDLTFLK--ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKV 56
Query: 204 LQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR-KGALKPSTAVRFALDIARG 262
+ + H +VQ G T+ P+ I+TEY+ G L +L+ + + + D+
Sbjct: 57 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 116
Query: 263 MNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPL 322
M YL + +HRDL RN L +D G +KV+DFG+S+ + E
Sbjct: 117 MEYLESKQ---FLHRDLAA-----------RNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 162
Query: 323 TCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAA 379
R+ PEV ++ +K D+++F +++ E+ G P+ ++E + A
Sbjct: 163 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 222
Query: 380 RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRL 421
R P A K+Y ++ CW+EK +RPTF+ +++ +
Sbjct: 223 RLYRPHLASEKVYT-----IMYSCWHEKADERPTFKILLSNI 259
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 137/282 (48%), Gaps = 33/282 (11%)
Query: 148 YEIDPHELDFTNSVEITKGTF-ILAF--WRG-IQVAVKKLGEEVISDDDRVRAFRDELAL 203
+EIDP +L F E+ G F ++ + WRG VA+K + E +S+D+ F +E +
Sbjct: 4 WEIDPKDLTFLK--ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKV 57
Query: 204 LQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR-KGALKPSTAVRFALDIARG 262
+ + H +VQ G T+ P+ I+TEY+ G L +L+ + + + D+
Sbjct: 58 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 117
Query: 263 MNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPL 322
M YL + +HRDL RN L +D G +KV+DFG+S+ + E
Sbjct: 118 MEYLESKQ---FLHRDLAA-----------RNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 163
Query: 323 TCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAA 379
R+ PEV ++ +K D+++F +++ E+ G P+ ++E + A
Sbjct: 164 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 223
Query: 380 RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRL 421
R P A K+Y ++ CW+EK +RPTF+ +++ +
Sbjct: 224 RLYRPHLASEKVYT-----IMYSCWHEKADERPTFKILLSNI 260
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 137/282 (48%), Gaps = 33/282 (11%)
Query: 148 YEIDPHELDFTNSVEITKGTF-ILAF--WRG-IQVAVKKLGEEVISDDDRVRAFRDELAL 203
+EIDP +L F E+ G F ++ + WRG VA+K + E +S+D+ F +E +
Sbjct: 10 WEIDPKDLTFLK--ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKV 63
Query: 204 LQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR-KGALKPSTAVRFALDIARG 262
+ + H +VQ G T+ P+ I+TEY+ G L +L+ + + + D+
Sbjct: 64 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 123
Query: 263 MNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPL 322
M YL + +HRDL RN L +D G +KV+DFG+S+ + E
Sbjct: 124 MEYLESKQ---FLHRDLAA-----------RNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 169
Query: 323 TCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAA 379
R+ PEV ++ +K D+++F +++ E+ G P+ ++E + A
Sbjct: 170 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 229
Query: 380 RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRL 421
R P A K+Y ++ CW+EK +RPTF+ +++ +
Sbjct: 230 RLYRPHLASEKVYT-----IMYSCWHEKADERPTFKILLSNI 266
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 137/282 (48%), Gaps = 33/282 (11%)
Query: 148 YEIDPHELDFTNSVEITKGTF-ILAF--WRG-IQVAVKKLGEEVISDDDRVRAFRDELAL 203
+EIDP +L F E+ G F ++ + WRG VA+K + E +S+D+ F +E +
Sbjct: 19 WEIDPKDLTFLK--ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKV 72
Query: 204 LQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR-KGALKPSTAVRFALDIARG 262
+ + H +VQ G T+ P+ I+TEY+ G L +L+ + + + D+
Sbjct: 73 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 132
Query: 263 MNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPL 322
M YL + +HRDL RN L +D G +KV+DFG+S+ + E
Sbjct: 133 MEYLESKQ---FLHRDLAA-----------RNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 178
Query: 323 TCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAA 379
R+ PEV ++ +K D+++F +++ E+ G P+ ++E + A
Sbjct: 179 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 238
Query: 380 RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRL 421
R P A K+Y ++ CW+EK +RPTF+ +++ +
Sbjct: 239 RLYRPHLASEKVYT-----IMYSCWHEKADERPTFKILLSNI 275
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 137/282 (48%), Gaps = 33/282 (11%)
Query: 148 YEIDPHELDFTNSVEITKGTF-ILAF--WRG-IQVAVKKLGEEVISDDDRVRAFRDELAL 203
+EIDP +L F E+ G F ++ + WRG VA+K + E +S+D+ F +E +
Sbjct: 4 WEIDPKDLTFLK--ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKV 57
Query: 204 LQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR-KGALKPSTAVRFALDIARG 262
+ + H +VQ G T+ P+ I+TEY+ G L +L+ + + + D+
Sbjct: 58 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 117
Query: 263 MNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPL 322
M YL + +HRDL RN L +D G +KV+DFG+S+ + E
Sbjct: 118 MEYLESKQ---FLHRDLAA-----------RNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 163
Query: 323 TCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAA 379
R+ PEV ++ +K D+++F +++ E+ G P+ ++E + A
Sbjct: 164 RGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 223
Query: 380 RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRL 421
R P A K+Y ++ CW+EK +RPTF+ +++ +
Sbjct: 224 RLYRPHLASEKVYT-----IMYSCWHEKADERPTFKILLSNI 260
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 132/272 (48%), Gaps = 33/272 (12%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 45 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 102
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM YL K +HRD
Sbjct: 103 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRD 157
Query: 279 LEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPE 335
L RN + D+ +KVADFG+++ + KE + T +++A E
Sbjct: 158 LAA-----------RNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALE 206
Query: 336 VFKNEEYDTKVDVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLY 392
+ +++ TK DV+SF ++L E M G PP+ D V R P P LY
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY 266
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
E++ +CW+ K RP+F ++++R+ +I
Sbjct: 267 -----EVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 128/268 (47%), Gaps = 47/268 (17%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLPK 234
+ A+K++ E DD R F EL +L K+ HPN++ LGA + + EY P
Sbjct: 53 MDAAIKRMKEYASKDDHR--DFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 110
Query: 235 GDLRAFLKRKGALK--PSTAV--------------RFALDIARGMNYLHENKPVPIIHRD 278
G+L FL++ L+ P+ A+ FA D+ARGM+YL + + IHRD
Sbjct: 111 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRD 167
Query: 279 LEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFK 338
L RNIL ++ K+ADFG+S+ V + T R++A E
Sbjct: 168 LAA-----------RNILVGENYVAKIADFGLSRGQEVYVKK--TMGRLPVRWMAIESLN 214
Query: 339 NEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNE----VPKAYAARQRPPFKAPAKLYA 393
Y T DV+S+ ++L E++ G P+ E +P+ Y R P ++Y
Sbjct: 215 YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY--RLEKPLNCDDEVY- 271
Query: 394 RGLKELIEECWNEKPAKRPTFRQIITRL 421
+L+ +CW EKP +RP+F QI+ L
Sbjct: 272 ----DLMRQCWREKPYERPSFAQILVSL 295
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 128/268 (47%), Gaps = 47/268 (17%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLPK 234
+ A+K++ E DD R F EL +L K+ HPN++ LGA + + EY P
Sbjct: 43 MDAAIKRMKEYASKDDHR--DFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 100
Query: 235 GDLRAFLKRKGALK--PSTAV--------------RFALDIARGMNYLHENKPVPIIHRD 278
G+L FL++ L+ P+ A+ FA D+ARGM+YL + + IHRD
Sbjct: 101 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRD 157
Query: 279 LEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFK 338
L RNIL ++ K+ADFG+S+ V + T R++A E
Sbjct: 158 LAA-----------RNILVGENYVAKIADFGLSRGQEVYVKK--TMGRLPVRWMAIESLN 204
Query: 339 NEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNE----VPKAYAARQRPPFKAPAKLYA 393
Y T DV+S+ ++L E++ G P+ E +P+ Y R P ++Y
Sbjct: 205 YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY--RLEKPLNCDDEVY- 261
Query: 394 RGLKELIEECWNEKPAKRPTFRQIITRL 421
+L+ +CW EKP +RP+F QI+ L
Sbjct: 262 ----DLMRQCWREKPYERPSFAQILVSL 285
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 131/281 (46%), Gaps = 39/281 (13%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E D V F E A++++I+HP
Sbjct: 17 HKLGGGQFGEVYEGV-----WKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHP 67
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAV--RFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + S V A I+ M YL +
Sbjct: 68 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 127
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
IHRDL RN L ++ +KVADFG+S+L+T
Sbjct: 128 KN---FIHRDLAA-----------RNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 173
Query: 329 CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRP 383
++ APE ++ K DV++F ++L E+ G P+ ++V K Y R
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDY--RMER 231
Query: 384 PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
P P K+Y EL+ CW P+ RP+F +I E++
Sbjct: 232 PEGCPEKVY-----ELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 134/276 (48%), Gaps = 33/276 (11%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 44 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 101
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM YL K +HRD
Sbjct: 102 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRD 156
Query: 279 LEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPE 335
L RN + D+ +KVADFG+++ + KE + T +++A E
Sbjct: 157 LAA-----------RNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 205
Query: 336 VFKNEEYDTKVDVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLY 392
+ +++ TK DV+SF ++L E M G PP+ D V R P P LY
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY 265
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 428
E++ +CW+ K RP+F ++++R+ +I ++
Sbjct: 266 -----EVMLKCWHPKAEMRPSFSELVSRISAIFSTF 296
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 134/276 (48%), Gaps = 33/276 (11%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 45 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 102
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM YL K +HRD
Sbjct: 103 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRD 157
Query: 279 LEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPE 335
L RN + D+ +KVADFG+++ + KE + T +++A E
Sbjct: 158 LAA-----------RNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 206
Query: 336 VFKNEEYDTKVDVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLY 392
+ +++ TK DV+SF ++L E M G PP+ D V R P P LY
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY 266
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 428
E++ +CW+ K RP+F ++++R+ +I ++
Sbjct: 267 -----EVMLKCWHPKAEMRPSFSELVSRISAIFSTF 297
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 134/276 (48%), Gaps = 33/276 (11%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM YL K +HRD
Sbjct: 104 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRD 158
Query: 279 LEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPE 335
L RN + D+ +KVADFG+++ + KE + T +++A E
Sbjct: 159 LAA-----------RNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 336 VFKNEEYDTKVDVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLY 392
+ +++ TK DV+SF ++L E M G PP+ D V R P P LY
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY 267
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 428
E++ +CW+ K RP+F ++++R+ +I ++
Sbjct: 268 -----EVMLKCWHPKAEMRPSFSELVSRISAIFSTF 298
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 134/276 (48%), Gaps = 33/276 (11%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM YL K +HRD
Sbjct: 104 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRD 158
Query: 279 LEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPE 335
L RN + D+ +KVADFG+++ + KE + T +++A E
Sbjct: 159 LAA-----------RNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 336 VFKNEEYDTKVDVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLY 392
+ +++ TK DV+SF ++L E M G PP+ D V R P P LY
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY 267
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 428
E++ +CW+ K RP+F ++++R+ +I ++
Sbjct: 268 -----EVMLKCWHPKAEMRPSFSELVSRISAIFSTF 298
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 134/276 (48%), Gaps = 33/276 (11%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 41 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 98
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM YL K +HRD
Sbjct: 99 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRD 153
Query: 279 LEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPE 335
L RN + D+ +KVADFG+++ + KE + T +++A E
Sbjct: 154 LAA-----------RNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 202
Query: 336 VFKNEEYDTKVDVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLY 392
+ +++ TK DV+SF ++L E M G PP+ D V R P P LY
Sbjct: 203 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY 262
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 428
E++ +CW+ K RP+F ++++R+ +I ++
Sbjct: 263 -----EVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 132/272 (48%), Gaps = 33/272 (12%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 64 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 121
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM YL K +HRD
Sbjct: 122 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRD 176
Query: 279 LEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPE 335
L RN + D+ +KVADFG+++ + KE + T +++A E
Sbjct: 177 LAA-----------RNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 225
Query: 336 VFKNEEYDTKVDVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLY 392
+ +++ TK DV+SF ++L E M G PP+ D V R P P LY
Sbjct: 226 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY 285
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
E++ +CW+ K RP+F ++++R+ +I
Sbjct: 286 -----EVMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 131/281 (46%), Gaps = 39/281 (13%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E D V F E A++++I+HP
Sbjct: 17 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHP 67
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAV--RFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + S V A I+ M YL +
Sbjct: 68 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 127
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
IHRDL RN L ++ +KVADFG+S+L+T
Sbjct: 128 KN---FIHRDLAA-----------RNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFP 173
Query: 329 CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRP 383
++ APE ++ K DV++F ++L E+ G P+ ++V K Y R
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDY--RMER 231
Query: 384 PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
P P K+Y EL+ CW P+ RP+F +I E++
Sbjct: 232 PEGCPEKVY-----ELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 134/276 (48%), Gaps = 33/276 (11%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 43 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 100
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM YL K +HRD
Sbjct: 101 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRD 155
Query: 279 LEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPE 335
L RN + D+ +KVADFG+++ + KE + T +++A E
Sbjct: 156 LAA-----------RNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 204
Query: 336 VFKNEEYDTKVDVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLY 392
+ +++ TK DV+SF ++L E M G PP+ D V R P P LY
Sbjct: 205 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY 264
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 428
E++ +CW+ K RP+F ++++R+ +I ++
Sbjct: 265 -----EVMLKCWHPKAEMRPSFSELVSRISAIFSTF 295
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 134/276 (48%), Gaps = 33/276 (11%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 38 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 95
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM YL K +HRD
Sbjct: 96 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRD 150
Query: 279 LEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPE 335
L RN + D+ +KVADFG+++ + KE + T +++A E
Sbjct: 151 LAA-----------RNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 199
Query: 336 VFKNEEYDTKVDVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLY 392
+ +++ TK DV+SF ++L E M G PP+ D V R P P LY
Sbjct: 200 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY 259
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 428
E++ +CW+ K RP+F ++++R+ +I ++
Sbjct: 260 -----EVMLKCWHPKAEMRPSFSELVSRISAIFSTF 290
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 131/281 (46%), Gaps = 39/281 (13%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E D V F E A++++I+HP
Sbjct: 19 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHP 69
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAV--RFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + S V A I+ M YL +
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
IHRDL RN L ++ +KVADFG+S+L+T
Sbjct: 130 KN---FIHRDLAA-----------RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 329 CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRP 383
++ APE ++ K DV++F ++L E+ G P+ ++V K Y R
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMER 233
Query: 384 PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
P P K+Y EL+ CW P+ RP+F +I E++
Sbjct: 234 PEGCPEKVY-----ELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 131/281 (46%), Gaps = 39/281 (13%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E D V F E A++++I+HP
Sbjct: 19 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHP 69
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAV--RFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + S V A I+ M YL +
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
IHRDL RN L ++ +KVADFG+S+L+T
Sbjct: 130 KN---FIHRDLAA-----------RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 329 CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRP 383
++ APE ++ K DV++F ++L E+ G P+ ++V K Y R
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMER 233
Query: 384 PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
P P K+Y EL+ CW P+ RP+F +I E++
Sbjct: 234 PEGCPEKVY-----ELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 134/276 (48%), Gaps = 33/276 (11%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 65 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 122
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPST--AVRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM YL K +HRD
Sbjct: 123 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRD 177
Query: 279 LEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPE 335
L RN + D+ +KVADFG+++ + KE + T +++A E
Sbjct: 178 LAA-----------RNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 226
Query: 336 VFKNEEYDTKVDVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLY 392
+ +++ TK DV+SF ++L E M G PP+ D V R P P LY
Sbjct: 227 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY 286
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 428
E++ +CW+ K RP+F ++++R+ +I ++
Sbjct: 287 -----EVMLKCWHPKAEMRPSFSELVSRISAIFSTF 317
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 132/281 (46%), Gaps = 39/281 (13%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E+ + V F E A++++I+HP
Sbjct: 24 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 74
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAV--RFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + S V A I+ M YL +
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 134
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
IHRDL RN L ++ +KVADFG+S+L+T
Sbjct: 135 KN---FIHRDLAA-----------RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 329 CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRP 383
++ APE ++ K DV++F ++L E+ G P+ ++V K Y R
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMER 238
Query: 384 PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
P P K+Y EL+ CW P+ RP+F +I E++
Sbjct: 239 PEGCPEKVY-----ELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 116/250 (46%), Gaps = 39/250 (15%)
Query: 197 FRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFL--------------- 241
FR E L +++HPNVV LG VT+ P+ ++ Y GDL FL
Sbjct: 59 FRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDD 118
Query: 242 -KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDS 300
K AL+P V IA GM YL + ++H+DL RN+L D
Sbjct: 119 RTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLA-----------TRNVLVYDK 164
Query: 301 GNLKVADFGVSKLLTVKEDRPLTCQD-TSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI 359
N+K++D G+ + + + L R++APE ++ D++S+ ++L E+
Sbjct: 165 LNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 224
Query: 360 E-GCPPFTMKHDNEVPKAYAARQRPPF--KAPAKLYARGLKELIEECWNEKPAKRPTFRQ 416
G P+ + +V + RQ P PA +YA L+ ECWNE P++RP F+
Sbjct: 225 SYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYA-----LMIECWNEFPSRRPRFKD 279
Query: 417 IITRLESINN 426
I +RL + N
Sbjct: 280 IHSRLRAWGN 289
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 116/250 (46%), Gaps = 39/250 (15%)
Query: 197 FRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFL--------------- 241
FR E L +++HPNVV LG VT+ P+ ++ Y GDL FL
Sbjct: 76 FRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDD 135
Query: 242 -KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDS 300
K AL+P V IA GM YL + ++H+DL RN+L D
Sbjct: 136 RTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLA-----------TRNVLVYDK 181
Query: 301 GNLKVADFGVSKLLTVKEDRPLTCQD-TSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI 359
N+K++D G+ + + + L R++APE ++ D++S+ ++L E+
Sbjct: 182 LNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 241
Query: 360 E-GCPPFTMKHDNEVPKAYAARQRPPF--KAPAKLYARGLKELIEECWNEKPAKRPTFRQ 416
G P+ + +V + RQ P PA +YA L+ ECWNE P++RP F+
Sbjct: 242 SYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYA-----LMIECWNEFPSRRPRFKD 296
Query: 417 IITRLESINN 426
I +RL + N
Sbjct: 297 IHSRLRAWGN 306
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 135/280 (48%), Gaps = 33/280 (11%)
Query: 150 IDPHELDFTNSVEITKGTF-ILAF--WRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQ 205
IDP +L F E+ G F ++ + WRG VA+K + E +S+D+ F +E ++
Sbjct: 1 IDPKDLTFLK--ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMM 54
Query: 206 KIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR-KGALKPSTAVRFALDIARGMN 264
+ H +VQ G T+ P+ I+TEY+ G L +L+ + + + D+ M
Sbjct: 55 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 114
Query: 265 YLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTC 324
YL + +HRDL RN L +D G +KV+DFG+S+ + E
Sbjct: 115 YLESKQ---FLHRDLAA-----------RNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 160
Query: 325 QDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQ 381
R+ PEV ++ +K D+++F +++ E+ G P+ ++E + A R
Sbjct: 161 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL 220
Query: 382 RPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRL 421
P A K+Y ++ CW+EK +RPTF+ +++ +
Sbjct: 221 YRPHLASEKVYT-----IMYSCWHEKADERPTFKILLSNI 255
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 129/271 (47%), Gaps = 29/271 (10%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L R I VA+K L + + R F E +++ + HPNV+ G VT+
Sbjct: 48 EVCSGHLKLPGKREIFVAIKTLKSGYT--EKQRRDFLSEASIMGQFDHPNVIHLEGVVTK 105
Query: 222 SSPMMIVTEYLPKGDLRAFLKRK-GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S+P+MI+TE++ G L +FL++ G V IA GM YL + + +HRDL
Sbjct: 106 STPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLA 162
Query: 281 PSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS----CRYVAPEV 336
RNIL + + KV+DFG+S+ L P R+ APE
Sbjct: 163 A-----------RNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 211
Query: 337 FKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAARQR--PPFKAPAKLYA 393
+ ++ + DV+S+ +++ E++ G P+ + +V A R PP P+ L+
Sbjct: 212 IQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALH- 270
Query: 394 RGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+L+ +CW + RP F QI+ L+ +
Sbjct: 271 ----QLMLDCWQKDRNHRPKFGQIVNTLDKM 297
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 128/258 (49%), Gaps = 33/258 (12%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+ VA+K L + ++ RV F E ++ + H N+++ G +++ PMMI+TEY+ G
Sbjct: 74 VPVAIKTL-KAGYTEKQRVD-FLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENG 131
Query: 236 DLRAFLKRK-GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L FL+ K G V IA GM YL + +HRDL RN
Sbjct: 132 ALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAA-----------RN 177
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPEVFKNEEYDTKVDVF 349
IL + + KV+DFG+S++L ED P TS R+ APE ++ + DV+
Sbjct: 178 ILVNSNLVCKVSDFGLSRVL---EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVW 234
Query: 350 SFALILQE-MIEGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNE 406
SF +++ E M G P+ ++EV KA R P P+ +Y +L+ +CW +
Sbjct: 235 SFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIY-----QLMMQCWQQ 289
Query: 407 KPAKRPTFRQIITRLESI 424
+ A+RP F I++ L+ +
Sbjct: 290 ERARRPKFADIVSILDKL 307
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 39/281 (13%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E+ + V F E A++++I+HP
Sbjct: 24 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 74
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR--KGALKPSTAVRFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + + + A I+ M YL +
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 134
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
IHRDL RN L ++ +KVADFG+S+L+T
Sbjct: 135 KN---FIHRDLAA-----------RNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 180
Query: 329 CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRP 383
++ APE ++ K DV++F ++L E+ G P+ ++V K Y R
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMER 238
Query: 384 PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
P P K+Y EL+ CW P+ RP+F +I E++
Sbjct: 239 PEGCPEKVY-----ELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 131/281 (46%), Gaps = 39/281 (13%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E D V F E A++++I+HP
Sbjct: 21 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHP 71
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR--KGALKPSTAVRFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + + + A I+ M YL +
Sbjct: 72 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 131
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
IHRDL RN L ++ +KVADFG+S+L+T
Sbjct: 132 KN---FIHRDLAA-----------RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 177
Query: 329 CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRP 383
++ APE ++ K DV++F ++L E+ G P+ ++V K Y R
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMER 235
Query: 384 PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
P P K+Y EL+ CW P+ RP+F +I E++
Sbjct: 236 PEGCPEKVY-----ELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 128/268 (47%), Gaps = 47/268 (17%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLPK 234
+ A+K++ E DD R F EL +L K+ HPN++ LGA + + EY P
Sbjct: 50 MDAAIKRMKEYASKDDHR--DFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 107
Query: 235 GDLRAFLKRKGALK--PSTAV--------------RFALDIARGMNYLHENKPVPIIHRD 278
G+L FL++ L+ P+ A+ FA D+ARGM+YL + + IHR+
Sbjct: 108 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRN 164
Query: 279 LEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFK 338
L RNIL ++ K+ADFG+S+ V + T R++A E
Sbjct: 165 LAA-----------RNILVGENYVAKIADFGLSRGQEVYVKK--TMGRLPVRWMAIESLN 211
Query: 339 NEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNE----VPKAYAARQRPPFKAPAKLYA 393
Y T DV+S+ ++L E++ G P+ E +P+ Y R P ++Y
Sbjct: 212 YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY--RLEKPLNCDDEVY- 268
Query: 394 RGLKELIEECWNEKPAKRPTFRQIITRL 421
+L+ +CW EKP +RP+F QI+ L
Sbjct: 269 ----DLMRQCWREKPYERPSFAQILVSL 292
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 131/281 (46%), Gaps = 39/281 (13%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E D V F E A++++I+HP
Sbjct: 32 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHP 82
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR--KGALKPSTAVRFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + + + A I+ M YL +
Sbjct: 83 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 142
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
IHRDL RN L ++ +KVADFG+S+L+T
Sbjct: 143 KN---FIHRDLAA-----------RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 188
Query: 329 CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRP 383
++ APE ++ K DV++F ++L E+ G P+ ++V K Y R
Sbjct: 189 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMER 246
Query: 384 PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
P P K+Y EL+ CW P+ RP+F +I E++
Sbjct: 247 PEGCPEKVY-----ELMRACWQWNPSDRPSFAEIHQAFETM 282
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 143/295 (48%), Gaps = 40/295 (13%)
Query: 152 PHELDFTNSVE-ITKGTFILAF--------WRGIQVAVKKLGEEVISDDDRVRAFRDELA 202
PHE T+S I KG F + + IQ A+K L I++ +V AF E
Sbjct: 17 PHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSR--ITEMQQVEAFLREGL 74
Query: 203 LLQKIRHPNVVQFLGAVTQSSPM-MIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDI 259
L++ + HPNV+ +G + + ++ Y+ GDL F+ R P+ + F L +
Sbjct: 75 LMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFI-RSPQRNPTVKDLISFGLQV 133
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
ARGM YL E K +HRDL RN + D+S +KVADFG+++ + +E
Sbjct: 134 ARGMEYLAEQK---FVHRDLAA-----------RNCMLDESFTVKVADFGLARDILDREY 179
Query: 320 RPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPK 375
+ + ++ A E + + TK DV+SF ++L E++ G PP+ ++
Sbjct: 180 YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTH 239
Query: 376 AYAARQR--PPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 428
A +R P P LY +++++CW PA RPTFR ++ +E I +++
Sbjct: 240 FLAQGRRLPQPEYCPDSLY-----QVMQQCWEADPAVRPTFRVLVGEVEQIVSAL 289
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 130/281 (46%), Gaps = 39/281 (13%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E D V F E A++++I+HP
Sbjct: 17 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHP 67
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAV--RFALDIARGMNYLHE 268
N+VQ LG T+ P I+ E++ G+L +L+ + S V A I+ M YL +
Sbjct: 68 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 127
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
IHRDL RN L ++ +KVADFG+S+L+T
Sbjct: 128 KN---FIHRDLAA-----------RNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 173
Query: 329 CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRP 383
++ APE ++ K DV++F ++L E+ G P+ ++V K Y R
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDY--RMER 231
Query: 384 PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
P P K+Y EL+ CW P+ RP+F +I E++
Sbjct: 232 PEGCPEKVY-----ELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 39/281 (13%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E+ + V F E A++++I+HP
Sbjct: 21 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 71
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR--KGALKPSTAVRFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + + + A I+ M YL +
Sbjct: 72 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 131
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
IHRDL RN L ++ +KVADFG+S+L+T
Sbjct: 132 KN---FIHRDLAA-----------RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 177
Query: 329 CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRP 383
++ APE ++ K DV++F ++L E+ G P+ ++V K Y R
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMER 235
Query: 384 PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
P P K+Y EL+ CW P+ RP+F +I E++
Sbjct: 236 PEGCPEKVY-----ELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 39/281 (13%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E+ + V F E A++++I+HP
Sbjct: 24 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 74
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR--KGALKPSTAVRFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + + + A I+ M YL +
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 134
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
IHRDL RN L ++ +KVADFG+S+L+T
Sbjct: 135 KN---FIHRDLAA-----------RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 329 CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRP 383
++ APE ++ K DV++F ++L E+ G P+ ++V K Y R
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMER 238
Query: 384 PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
P P K+Y EL+ CW P+ RP+F +I E++
Sbjct: 239 PEGCPEKVY-----ELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 131/281 (46%), Gaps = 39/281 (13%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E D V F E A++++I+HP
Sbjct: 23 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHP 73
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR--KGALKPSTAVRFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + + + A I+ M YL +
Sbjct: 74 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 133
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
IHRDL RN L ++ +KVADFG+S+L+T
Sbjct: 134 KN---FIHRDLAA-----------RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 179
Query: 329 CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRP 383
++ APE ++ K DV++F ++L E+ G P+ ++V K Y R
Sbjct: 180 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMER 237
Query: 384 PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
P P K+Y EL+ CW P+ RP+F +I E++
Sbjct: 238 PEGCPEKVY-----ELMRACWQWNPSDRPSFAEIHQAFETM 273
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 131/281 (46%), Gaps = 39/281 (13%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E D V F E A++++I+HP
Sbjct: 24 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHP 74
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR--KGALKPSTAVRFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + + + A I+ M YL +
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 134
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
IHRDL RN L ++ +KVADFG+S+L+T
Sbjct: 135 KN---FIHRDLAA-----------RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 329 CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRP 383
++ APE ++ K DV++F ++L E+ G P+ ++V K Y R
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMER 238
Query: 384 PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
P P K+Y EL+ CW P+ RP+F +I E++
Sbjct: 239 PEGCPEKVY-----ELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 131/281 (46%), Gaps = 39/281 (13%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E D V F E A++++I+HP
Sbjct: 19 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHP 69
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR--KGALKPSTAVRFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + + + A I+ M YL +
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 129
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
IHRDL RN L ++ +KVADFG+S+L+T
Sbjct: 130 KN---FIHRDLAA-----------RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 329 CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRP 383
++ APE ++ K DV++F ++L E+ G P+ ++V K Y R
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMER 233
Query: 384 PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
P P K+Y EL+ CW P+ RP+F +I E++
Sbjct: 234 PEGCPEKVY-----ELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 131/281 (46%), Gaps = 39/281 (13%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E D V F E A++++I+HP
Sbjct: 19 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHP 69
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR--KGALKPSTAVRFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + + + A I+ M YL +
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 129
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
IHRDL RN L ++ +KVADFG+S+L+T
Sbjct: 130 KN---FIHRDLAA-----------RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 329 CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRP 383
++ APE ++ K DV++F ++L E+ G P+ ++V K Y R
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMER 233
Query: 384 PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
P P K+Y EL+ CW P+ RP+F +I E++
Sbjct: 234 PEGCPEKVY-----ELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 145/299 (48%), Gaps = 34/299 (11%)
Query: 150 IDPHELDFTNSVEITKGTFILAFWRGIQVAVKKLGEEVISD----DDRVRAFRDELALLQ 205
+DP EL FT +I KG+F F +GI +K+ I D +D + + E+ +L
Sbjct: 3 LDPEEL-FTKLEKIGKGSFGEVF-KGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS 60
Query: 206 KIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNY 265
+ P V ++ G+ + + + I+ EYL G L+ G L + +I +G++Y
Sbjct: 61 QCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDY 119
Query: 266 LHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ 325
LH K IHRD++ + N+L + G +K+ADFGV+ LT + + T
Sbjct: 120 LHSEKK---IHRDIKAA-----------NVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV 165
Query: 326 DTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPF 385
T ++APEV K YD+K D++S + E+ G PP + H +V P
Sbjct: 166 GTPF-WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTL 224
Query: 386 KAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS---------INHKRRWK 435
+ Y++ LKE +E C N++P+ RPT ++++ + N+ I+ +RWK
Sbjct: 225 EGN---YSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYKRWK 280
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 131/281 (46%), Gaps = 39/281 (13%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E D V F E A++++I+HP
Sbjct: 21 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHP 71
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR--KGALKPSTAVRFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + + + A I+ M YL +
Sbjct: 72 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 131
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
IHRDL RN L ++ +KVADFG+S+L+T
Sbjct: 132 KN---FIHRDLAA-----------RNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFP 177
Query: 329 CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRP 383
++ APE ++ K DV++F ++L E+ G P+ ++V K Y R
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMER 235
Query: 384 PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
P P K+Y EL+ CW P+ RP+F +I E++
Sbjct: 236 PEGCPEKVY-----ELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 131/281 (46%), Gaps = 39/281 (13%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E D V F E A++++I+HP
Sbjct: 20 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHP 70
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR--KGALKPSTAVRFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + + + A I+ M YL +
Sbjct: 71 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 130
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
IHRDL RN L ++ +KVADFG+S+L+T
Sbjct: 131 KN---FIHRDLAA-----------RNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFP 176
Query: 329 CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRP 383
++ APE ++ K DV++F ++L E+ G P+ ++V K Y R
Sbjct: 177 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMER 234
Query: 384 PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
P P K+Y EL+ CW P+ RP+F +I E++
Sbjct: 235 PEGCPEKVY-----ELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 132/272 (48%), Gaps = 33/272 (12%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 47 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 104
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM +L K +HRD
Sbjct: 105 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRD 159
Query: 279 LEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPE 335
L RN + D+ +KVADFG+++ + KE + T +++A E
Sbjct: 160 LAA-----------RNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 208
Query: 336 VFKNEEYDTKVDVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLY 392
+ +++ TK DV+SF ++L E M G PP+ D V R P P LY
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY 268
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
E++ +CW+ K RP+F ++++R+ +I
Sbjct: 269 -----EVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 132/272 (48%), Gaps = 33/272 (12%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 47 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 104
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM +L K +HRD
Sbjct: 105 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRD 159
Query: 279 LEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPE 335
L RN + D+ +KVADFG+++ + KE + T +++A E
Sbjct: 160 LAA-----------RNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALE 208
Query: 336 VFKNEEYDTKVDVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLY 392
+ +++ TK DV+SF ++L E M G PP+ D V R P P LY
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY 268
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
E++ +CW+ K RP+F ++++R+ +I
Sbjct: 269 -----EVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 132/272 (48%), Gaps = 33/272 (12%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 44 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 101
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM +L K +HRD
Sbjct: 102 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRD 156
Query: 279 LEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPE 335
L RN + D+ +KVADFG+++ + KE + T +++A E
Sbjct: 157 LAA-----------RNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 205
Query: 336 VFKNEEYDTKVDVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLY 392
+ +++ TK DV+SF ++L E M G PP+ D V R P P LY
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY 265
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
E++ +CW+ K RP+F ++++R+ +I
Sbjct: 266 -----EVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 132/281 (46%), Gaps = 39/281 (13%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E+ + V F E A++++I+HP
Sbjct: 226 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 276
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAV--RFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + S V A I+ M YL +
Sbjct: 277 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 336
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
IHR+L RN L ++ +KVADFG+S+L+T
Sbjct: 337 KN---FIHRNLAA-----------RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 382
Query: 329 CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRP 383
++ APE ++ K DV++F ++L E+ G P+ ++V K Y R
Sbjct: 383 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMER 440
Query: 384 PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
P P K+Y EL+ CW P+ RP+F +I E++
Sbjct: 441 PEGCPEKVY-----ELMRACWQWNPSDRPSFAEIHQAFETM 476
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 132/272 (48%), Gaps = 33/272 (12%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 51 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 108
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM +L K +HRD
Sbjct: 109 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRD 163
Query: 279 LEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPE 335
L RN + D+ +KVADFG+++ + KE + T +++A E
Sbjct: 164 LAA-----------RNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 212
Query: 336 VFKNEEYDTKVDVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLY 392
+ +++ TK DV+SF ++L E M G PP+ D V R P P LY
Sbjct: 213 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY 272
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
E++ +CW+ K RP+F ++++R+ +I
Sbjct: 273 -----EVMLKCWHPKAEMRPSFSELVSRISAI 299
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 132/272 (48%), Gaps = 33/272 (12%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM +L K +HRD
Sbjct: 104 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRD 158
Query: 279 LEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPE 335
L RN + D+ +KVADFG+++ + KE + T +++A E
Sbjct: 159 LAA-----------RNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 336 VFKNEEYDTKVDVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLY 392
+ +++ TK DV+SF ++L E M G PP+ D V R P P LY
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY 267
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
E++ +CW+ K RP+F ++++R+ +I
Sbjct: 268 -----EVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 134/276 (48%), Gaps = 33/276 (11%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM +L K +HRD
Sbjct: 104 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRD 158
Query: 279 LEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPE 335
L RN + D+ +KVADFG+++ + KE + T +++A E
Sbjct: 159 LAA-----------RNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 336 VFKNEEYDTKVDVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLY 392
+ +++ TK DV+SF ++L E M G PP+ D V R P P LY
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY 267
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 428
E++ +CW+ K RP+F ++++R+ +I ++
Sbjct: 268 -----EVMLKCWHPKAEMRPSFSELVSRISAIFSTF 298
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 132/272 (48%), Gaps = 33/272 (12%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 105 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 162
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM +L K +HRD
Sbjct: 163 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRD 217
Query: 279 LEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPE 335
L RN + D+ +KVADFG+++ + KE + T +++A E
Sbjct: 218 LAA-----------RNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 266
Query: 336 VFKNEEYDTKVDVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLY 392
+ +++ TK DV+SF ++L E M G PP+ D V R P P LY
Sbjct: 267 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY 326
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
E++ +CW+ K RP+F ++++R+ +I
Sbjct: 327 -----EVMLKCWHPKAEMRPSFSELVSRISAI 353
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 130/281 (46%), Gaps = 39/281 (13%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E D V F E A++++I+HP
Sbjct: 19 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHP 69
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAV--RFALDIARGMNYLHE 268
N+VQ LG T+ P I+ E++ G+L +L+ + S V A I+ M YL +
Sbjct: 70 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
IHRDL RN L ++ +KVADFG+S+L+T
Sbjct: 130 KN---FIHRDLAA-----------RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 329 CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRP 383
++ APE ++ K DV++F ++L E+ G P+ ++V K Y R
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMER 233
Query: 384 PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
P P K+Y EL+ CW P+ RP+F +I E++
Sbjct: 234 PEGCPEKVY-----ELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 130/281 (46%), Gaps = 39/281 (13%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E D V F E A++++I+HP
Sbjct: 19 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHP 69
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAV--RFALDIARGMNYLHE 268
N+VQ LG T+ P I+ E++ G+L +L+ + S V A I+ M YL +
Sbjct: 70 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
IHRDL RN L ++ +KVADFG+S+L+T
Sbjct: 130 KN---FIHRDLAA-----------RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 329 CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRP 383
++ APE ++ K DV++F ++L E+ G P+ ++V K Y R
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMER 233
Query: 384 PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
P P K+Y EL+ CW P+ RP+F +I E++
Sbjct: 234 PEGCPEKVY-----ELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 132/266 (49%), Gaps = 36/266 (13%)
Query: 166 GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + ++ G +VAVK L + +S D AF E L+++++H +V+ VTQ P
Sbjct: 22 GEVWMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-P 76
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPST--AVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+ I+TEY+ G L FLK +K + + A IA GM ++ E IHRDL +
Sbjct: 77 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 133
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKN 339
NIL D+ + K+ADFG+++L+ ED T ++ + ++ APE
Sbjct: 134 -----------NILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINY 179
Query: 340 EEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGL 396
+ K DV+SF ++L E++ G P+ + EV + R P P +LY
Sbjct: 180 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY---- 235
Query: 397 KELIEECWNEKPAKRPTFRQIITRLE 422
+L+ CW E+P RPTF + + LE
Sbjct: 236 -QLMRLCWKERPEDRPTFDYLRSVLE 260
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 132/266 (49%), Gaps = 36/266 (13%)
Query: 166 GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + ++ G +VAVK L + +S D AF E L+++++H +V+ VTQ P
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-P 81
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPST--AVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+ I+TEY+ G L FLK +K + + A IA GM ++ E IHRDL +
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 138
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKN 339
NIL D+ + K+ADFG+++L+ ED T ++ + ++ APE
Sbjct: 139 -----------NILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINY 184
Query: 340 EEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGL 396
+ K DV+SF ++L E++ G P+ + EV + R P P +LY
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY---- 240
Query: 397 KELIEECWNEKPAKRPTFRQIITRLE 422
+L+ CW E+P RPTF + + LE
Sbjct: 241 -QLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 140/287 (48%), Gaps = 37/287 (12%)
Query: 146 PEYEIDPHELDFTNSVEITK-GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELAL 203
PE+E+ L + + G + ++ G +VAVK L + +S D AF E L
Sbjct: 2 PEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANL 57
Query: 204 LQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPST--AVRFALDIAR 261
+++++H +V+ VTQ P+ I+TEY+ G L FLK +K + + A IA
Sbjct: 58 MKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 116
Query: 262 GMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRP 321
GM ++ E IHR+L + NIL D+ + K+ADFG+++L+ ED
Sbjct: 117 GMAFIEERN---YIHRNLRAA-----------NILVSDTLSCKIADFGLARLI---EDNE 159
Query: 322 LTCQDTS---CRYVAPEVFKNEEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPKAY 377
T ++ + ++ APE + K DV+SF ++L E++ G P+ + EV +
Sbjct: 160 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 219
Query: 378 --AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLE 422
R P P +LY +L+ CW E+P RPTF + + LE
Sbjct: 220 ERGYRMVRPDNCPEELY-----QLMRLCWKERPEDRPTFDYLRSVLE 261
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 132/266 (49%), Gaps = 36/266 (13%)
Query: 166 GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + ++ G +VAVK L + +S D AF E L+++++H +V+ VTQ P
Sbjct: 28 GEVWMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-P 82
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPST--AVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+ I+TEY+ G L FLK +K + + A IA GM ++ E IHRDL +
Sbjct: 83 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 139
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKN 339
NIL D+ + K+ADFG+++L+ ED T ++ + ++ APE
Sbjct: 140 -----------NILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINY 185
Query: 340 EEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGL 396
+ K DV+SF ++L E++ G P+ + EV + R P P +LY
Sbjct: 186 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY---- 241
Query: 397 KELIEECWNEKPAKRPTFRQIITRLE 422
+L+ CW E+P RPTF + + LE
Sbjct: 242 -QLMRLCWKERPEDRPTFDYLRSVLE 266
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 132/266 (49%), Gaps = 36/266 (13%)
Query: 166 GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + ++ G +VAVK L + +S D AF E L+++++H +V+ VTQ P
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-P 81
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPST--AVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+ I+TEY+ G L FLK +K + + A IA GM ++ E IHRDL +
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 138
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKN 339
NIL D+ + K+ADFG+++L+ ED T ++ + ++ APE
Sbjct: 139 -----------NILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINY 184
Query: 340 EEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGL 396
+ K DV+SF ++L E++ G P+ + EV + R P P +LY
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY---- 240
Query: 397 KELIEECWNEKPAKRPTFRQIITRLE 422
+L+ CW E+P RPTF + + LE
Sbjct: 241 -QLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 132/266 (49%), Gaps = 36/266 (13%)
Query: 166 GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + ++ G +VAVK L + +S D AF E L+++++H +V+ VTQ P
Sbjct: 33 GEVWMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-P 87
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPST--AVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+ I+TEY+ G L FLK +K + + A IA GM ++ E IHRDL +
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 144
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKN 339
NIL D+ + K+ADFG+++L+ ED T ++ + ++ APE
Sbjct: 145 -----------NILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINY 190
Query: 340 EEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGL 396
+ K DV+SF ++L E++ G P+ + EV + R P P +LY
Sbjct: 191 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY---- 246
Query: 397 KELIEECWNEKPAKRPTFRQIITRLE 422
+L+ CW E+P RPTF + + LE
Sbjct: 247 -QLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 132/266 (49%), Gaps = 36/266 (13%)
Query: 166 GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + ++ G +VAVK L + +S D AF E L+++++H +V+ VTQ P
Sbjct: 32 GEVWMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-P 86
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPST--AVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+ I+TEY+ G L FLK +K + + A IA GM ++ E IHRDL +
Sbjct: 87 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 143
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKN 339
NIL D+ + K+ADFG+++L+ ED T ++ + ++ APE
Sbjct: 144 -----------NILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINY 189
Query: 340 EEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGL 396
+ K DV+SF ++L E++ G P+ + EV + R P P +LY
Sbjct: 190 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY---- 245
Query: 397 KELIEECWNEKPAKRPTFRQIITRLE 422
+L+ CW E+P RPTF + + LE
Sbjct: 246 -QLMRLCWKERPEDRPTFDYLRSVLE 270
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 132/266 (49%), Gaps = 36/266 (13%)
Query: 166 GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + ++ G +VAVK L + +S D AF E L+++++H +V+ VTQ P
Sbjct: 29 GEVWMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-P 83
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPST--AVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+ I+TEY+ G L FLK +K + + A IA GM ++ E IHRDL +
Sbjct: 84 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 140
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKN 339
NIL D+ + K+ADFG+++L+ ED T ++ + ++ APE
Sbjct: 141 -----------NILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINY 186
Query: 340 EEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGL 396
+ K DV+SF ++L E++ G P+ + EV + R P P +LY
Sbjct: 187 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY---- 242
Query: 397 KELIEECWNEKPAKRPTFRQIITRLE 422
+L+ CW E+P RPTF + + LE
Sbjct: 243 -QLMRLCWKERPEDRPTFDYLRSVLE 267
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 129/279 (46%), Gaps = 35/279 (12%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E D V F E A++++I+HP
Sbjct: 20 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHP 70
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR--KGALKPSTAVRFALDIARGMNYLHE 268
N+VQ LG T+ P I+ E++ G+L +L+ + + + A I+ M YL +
Sbjct: 71 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 130
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
IHRDL RN L ++ +KVADFG+S+L+T
Sbjct: 131 KN---FIHRDLAA-----------RNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 176
Query: 329 CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAA--RQRPPF 385
++ APE ++ K DV++F ++L E+ G P+ ++V + R P
Sbjct: 177 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE 236
Query: 386 KAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
P K+Y EL+ CW P+ RP+F +I E++
Sbjct: 237 GCPEKVY-----ELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 132/281 (46%), Gaps = 39/281 (13%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E+ + V F E A++++I+HP
Sbjct: 223 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 273
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK--RKGALKPSTAVRFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + + + A I+ M YL +
Sbjct: 274 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 333
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
IHR+L RN L ++ +KVADFG+S+L+T
Sbjct: 334 KN---FIHRNLAA-----------RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 379
Query: 329 CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRP 383
++ APE ++ K DV++F ++L E+ G P+ ++V K Y R
Sbjct: 380 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMER 437
Query: 384 PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
P P K+Y EL+ CW P+ RP+F +I E++
Sbjct: 438 PEGCPEKVY-----ELMRACWQWNPSDRPSFAEIHQAFETM 473
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 128/271 (47%), Gaps = 29/271 (10%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L R I VA+K L + + R F E +++ + HPNV+ G VT+
Sbjct: 22 EVCSGHLKLPGKREIFVAIKTLKSGYT--EKQRRDFLSEASIMGQFDHPNVIHLEGVVTK 79
Query: 222 SSPMMIVTEYLPKGDLRAFLKRK-GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S+P+MI+TE++ G L +FL++ G V IA GM YL + + +HR L
Sbjct: 80 STPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRALA 136
Query: 281 PSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS----CRYVAPEV 336
RNIL + + KV+DFG+S+ L P R+ APE
Sbjct: 137 A-----------RNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 185
Query: 337 FKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAARQR--PPFKAPAKLYA 393
+ ++ + DV+S+ +++ E++ G P+ + +V A R PP P+ L+
Sbjct: 186 IQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALH- 244
Query: 394 RGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+L+ +CW + RP F QI+ L+ +
Sbjct: 245 ----QLMLDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 132/266 (49%), Gaps = 36/266 (13%)
Query: 166 GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + ++ G +VAVK L + +S D AF E L+++++H +V+ VTQ P
Sbjct: 37 GEVWMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-P 91
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPST--AVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+ I+TEY+ G L FLK +K + + A IA GM ++ E IHRDL +
Sbjct: 92 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 148
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKN 339
NIL D+ + K+ADFG+++L+ ED T ++ + ++ APE
Sbjct: 149 -----------NILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINY 194
Query: 340 EEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGL 396
+ K DV+SF ++L E++ G P+ + EV + R P P +LY
Sbjct: 195 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY---- 250
Query: 397 KELIEECWNEKPAKRPTFRQIITRLE 422
+L+ CW E+P RPTF + + LE
Sbjct: 251 -QLMRLCWKERPEDRPTFDYLRSVLE 275
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 132/281 (46%), Gaps = 39/281 (13%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E+ + V F E A++++I+HP
Sbjct: 265 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 315
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK--RKGALKPSTAVRFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + + + A I+ M YL +
Sbjct: 316 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 375
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
IHR+L RN L ++ +KVADFG+S+L+T
Sbjct: 376 KN---FIHRNLAA-----------RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 421
Query: 329 CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRP 383
++ APE ++ K DV++F ++L E+ G P+ ++V K Y R
Sbjct: 422 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMER 479
Query: 384 PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
P P K+Y EL+ CW P+ RP+F +I E++
Sbjct: 480 PEGCPEKVY-----ELMRACWQWNPSDRPSFAEIHQAFETM 515
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 132/266 (49%), Gaps = 36/266 (13%)
Query: 166 GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + ++ G +VAVK L + +S D AF E L+++++H +V+ VTQ P
Sbjct: 35 GEVWMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-P 89
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPST--AVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+ I+TEY+ G L FLK +K + + A IA GM ++ E IHRDL +
Sbjct: 90 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 146
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKN 339
NIL D+ + K+ADFG+++L+ ED T ++ + ++ APE
Sbjct: 147 -----------NILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINY 192
Query: 340 EEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGL 396
+ K DV+SF ++L E++ G P+ + EV + R P P +LY
Sbjct: 193 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY---- 248
Query: 397 KELIEECWNEKPAKRPTFRQIITRLE 422
+L+ CW E+P RPTF + + LE
Sbjct: 249 -QLMRLCWKERPEDRPTFDYLRSVLE 273
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 132/266 (49%), Gaps = 36/266 (13%)
Query: 166 GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + ++ G +VAVK L + +S D AF E L+++++H +V+ VTQ P
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-P 81
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPST--AVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+ I+TEY+ G L FLK +K + + A IA GM ++ E IHRDL +
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 138
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKN 339
NIL D+ + K+ADFG+++L+ ED T ++ + ++ APE
Sbjct: 139 -----------NILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINY 184
Query: 340 EEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGL 396
+ K DV+SF ++L E++ G P+ + EV + R P P +LY
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY---- 240
Query: 397 KELIEECWNEKPAKRPTFRQIITRLE 422
+L+ CW E+P RPTF + + LE
Sbjct: 241 -QLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 132/266 (49%), Gaps = 36/266 (13%)
Query: 166 GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + ++ G +VAVK L + +S D AF E L+++++H +V+ VTQ P
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-P 81
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPST--AVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+ I+TEY+ G L FLK +K + + A IA GM ++ E IHRDL +
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 138
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKN 339
NIL D+ + K+ADFG+++L+ ED T ++ + ++ APE
Sbjct: 139 -----------NILVSDTLSCKIADFGLARLI---EDAEXTAREGAKFPIKWTAPEAINY 184
Query: 340 EEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGL 396
+ K DV+SF ++L E++ G P+ + EV + R P P +LY
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY---- 240
Query: 397 KELIEECWNEKPAKRPTFRQIITRLE 422
+L+ CW E+P RPTF + + LE
Sbjct: 241 -QLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 132/266 (49%), Gaps = 36/266 (13%)
Query: 166 GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + ++ G +VAVK L + +S D AF E L+++++H +V+ VTQ P
Sbjct: 33 GEVWMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-P 87
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPST--AVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+ I+TEY+ G L FLK +K + + A IA GM ++ E IHRDL +
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 144
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKN 339
NIL D+ + K+ADFG+++L+ ED T ++ + ++ APE
Sbjct: 145 -----------NILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINY 190
Query: 340 EEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGL 396
+ K DV+SF ++L E++ G P+ + EV + R P P +LY
Sbjct: 191 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY---- 246
Query: 397 KELIEECWNEKPAKRPTFRQIITRLE 422
+L+ CW E+P RPTF + + LE
Sbjct: 247 -QLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 144/299 (48%), Gaps = 34/299 (11%)
Query: 150 IDPHELDFTNSVEITKGTFILAFWRGIQVAVKKLGEEVISD----DDRVRAFRDELALLQ 205
+DP EL FT +I KG+F F +GI +K+ I D +D + + E+ +L
Sbjct: 3 LDPEEL-FTKLEKIGKGSFGEVF-KGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS 60
Query: 206 KIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNY 265
+ P V ++ G+ + + + I+ EYL G L+ G L + +I +G++Y
Sbjct: 61 QCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDY 119
Query: 266 LHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ 325
LH K IHRD++ + N+L + G +K+ADFGV+ LT + +
Sbjct: 120 LHSEKK---IHRDIKAA-----------NVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV 165
Query: 326 DTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPF 385
T ++APEV K YD+K D++S + E+ G PP + H +V P
Sbjct: 166 GTPF-WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTL 224
Query: 386 KAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS---------INHKRRWK 435
+ Y++ LKE +E C N++P+ RPT ++++ + N+ I+ +RWK
Sbjct: 225 EGN---YSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYKRWK 280
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 132/266 (49%), Gaps = 36/266 (13%)
Query: 166 GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + ++ G +VAVK L + +S D AF E L+++++H +V+ VTQ P
Sbjct: 36 GEVWMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-P 90
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPST--AVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+ I+TEY+ G L FLK +K + + A IA GM ++ E IHRDL +
Sbjct: 91 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 147
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKN 339
NIL D+ + K+ADFG+++L+ ED T ++ + ++ APE
Sbjct: 148 -----------NILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINY 193
Query: 340 EEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGL 396
+ K DV+SF ++L E++ G P+ + EV + R P P +LY
Sbjct: 194 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY---- 249
Query: 397 KELIEECWNEKPAKRPTFRQIITRLE 422
+L+ CW E+P RPTF + + LE
Sbjct: 250 -QLMRLCWKERPEDRPTFDYLRSVLE 274
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 130/281 (46%), Gaps = 39/281 (13%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E D V F E A++++I+HP
Sbjct: 24 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHP 74
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR--KGALKPSTAVRFALDIARGMNYLHE 268
N+VQ LG T+ P I+ E++ G+L +L+ + + + A I+ M YL +
Sbjct: 75 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 134
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
IHRDL RN L ++ +KVADFG+S+L+T
Sbjct: 135 KN---FIHRDLAA-----------RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 329 CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRP 383
++ APE ++ K DV++F ++L E+ G P+ ++V K Y R
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMER 238
Query: 384 PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
P P K+Y EL+ CW P+ RP+F +I E++
Sbjct: 239 PEGCPEKVY-----ELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 138/275 (50%), Gaps = 29/275 (10%)
Query: 150 IDPHELDFTNSVEITKGTFILAFWRGIQ------VAVKKLGEEVISDDDRVRAFRDELAL 203
+DP EL FT +I KG+F F +GI VA+K + ++ +D + + E+ +
Sbjct: 23 MDPEEL-FTKLEKIGKGSFGEVF-KGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITV 78
Query: 204 LQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGM 263
L + P V ++ G+ + + + I+ EYL G L+ G L + +I +G+
Sbjct: 79 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGL 137
Query: 264 NYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLT 323
+YLH K IHRD++ + N+L + G +K+ADFGV+ LT + + T
Sbjct: 138 DYLHSEKK---IHRDIKAA-----------NVLLSEHGEVKLADFGVAGQLTDTQIKRNT 183
Query: 324 CQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRP 383
T ++APEV K YD+K D++S + E+ G PP + H +V P
Sbjct: 184 FVGTPF-WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPP 242
Query: 384 PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
+ Y++ LKE +E C N++P+ RPT ++++
Sbjct: 243 TLEGN---YSKPLKEFVEACLNKEPSFRPTAKELL 274
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 140/306 (45%), Gaps = 35/306 (11%)
Query: 131 KPLMAPMHVKHAREVPEYEIDPHELDFTNSVEITKGTFILAFWRGIQ-----VAVKKLGE 185
+PL V R VP+ + + D +I +G F F ++ VAVK
Sbjct: 90 QPLTKKSGVVLHRAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSC-R 148
Query: 186 EVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKG 245
E + D + + F E +L++ HPN+V+ +G TQ P+ IV E + GD FL+ +G
Sbjct: 149 ETLPPDLKAK-FLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG 207
Query: 246 A-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLK 304
A L+ T ++ D A GM YL E+K IHRDL RN L + LK
Sbjct: 208 ARLRVKTLLQMVGDAAAGMEYL-ESKCC--IHRDLAA-----------RNCLVTEKNVLK 253
Query: 305 VADFGVSKLLTVKEDRPLTCQDTSCR-----YVAPEVFKNEEYDTKVDVFSFALILQEMI 359
++DFG+S+ +E + R + APE Y ++ DV+SF ++L E
Sbjct: 254 ISDFGMSR----EEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETF 309
Query: 360 E-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
G P+ + + + R P +L + L+E+CW +P +RP+F I
Sbjct: 310 SLGASPYPNLSNQQTREFVEKGGRLPC---PELCPDAVFRLMEQCWAYEPGQRPSFSTIY 366
Query: 419 TRLESI 424
L+SI
Sbjct: 367 QELQSI 372
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 140/306 (45%), Gaps = 35/306 (11%)
Query: 131 KPLMAPMHVKHAREVPEYEIDPHELDFTNSVEITKGTFILAFWRGIQ-----VAVKKLGE 185
+PL V R VP+ + + D +I +G F F ++ VAVK
Sbjct: 90 QPLTKKSGVVLHRAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSC-R 148
Query: 186 EVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKG 245
E + D + + F E +L++ HPN+V+ +G TQ P+ IV E + GD FL+ +G
Sbjct: 149 ETLPPDLKAK-FLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG 207
Query: 246 A-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLK 304
A L+ T ++ D A GM YL E+K IHRDL RN L + LK
Sbjct: 208 ARLRVKTLLQMVGDAAAGMEYL-ESKCC--IHRDLAA-----------RNCLVTEKNVLK 253
Query: 305 VADFGVSKLLTVKEDRPLTCQDTSCR-----YVAPEVFKNEEYDTKVDVFSFALILQEMI 359
++DFG+S+ +E + R + APE Y ++ DV+SF ++L E
Sbjct: 254 ISDFGMSR----EEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETF 309
Query: 360 E-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
G P+ + + + R P +L + L+E+CW +P +RP+F I
Sbjct: 310 SLGASPYPNLSNQQTREFVEKGGRLPC---PELCPDAVFRLMEQCWAYEPGQRPSFSTIY 366
Query: 419 TRLESI 424
L+SI
Sbjct: 367 QELQSI 372
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 143/298 (47%), Gaps = 34/298 (11%)
Query: 151 DPHELDFTNSVEITKGTFILAFWRGIQVAVKKLGEEVISD----DDRVRAFRDELALLQK 206
DP EL FT +I KG+F F +GI +K+ I D +D + + E+ +L +
Sbjct: 19 DPEEL-FTKLEKIGKGSFGEVF-KGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ 76
Query: 207 IRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
P V ++ G+ + + + I+ EYL G L+ G L + +I +G++YL
Sbjct: 77 CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYL 135
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD 326
H K IHRD++ + N+L + G +K+ADFGV+ LT + +
Sbjct: 136 HSEKK---IHRDIKAA-----------NVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVG 181
Query: 327 TSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFK 386
T ++APEV K YD+K D++S + E+ G PP + H +V P +
Sbjct: 182 TPF-WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLE 240
Query: 387 APAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS---------INHKRRWK 435
Y++ LKE +E C N++P+ RPT ++++ + N+ I+ +RWK
Sbjct: 241 GN---YSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYKRWK 295
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 124/261 (47%), Gaps = 35/261 (13%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+QVAVK L EV S+ D + F E ++ K+ H N+V+ +G QS P I+ E + G
Sbjct: 62 LQVAVKTL-PEVCSEQDELD-FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGG 119
Query: 236 DLRAFLK--RKGALKPST-----AVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAY 288
DL++FL+ R +PS+ + A DIA G YL EN IHRD+
Sbjct: 120 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIA-------- 168
Query: 289 WQNDRNILRDDSGNLKVA---DFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
RN L G +VA DFG+++ + R C +++ PE F + +
Sbjct: 169 ---ARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS 225
Query: 345 KVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARGLKELIE 401
K D +SF ++L E+ G P+ K + EV + R PP P +Y ++
Sbjct: 226 KTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMT 280
Query: 402 ECWNEKPAKRPTFRQIITRLE 422
+CW +P RP F I+ R+E
Sbjct: 281 QCWQHQPEDRPNFAIILERIE 301
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 124/261 (47%), Gaps = 35/261 (13%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+QVAVK L EV S+ D + F E ++ K+ H N+V+ +G QS P I+ E + G
Sbjct: 76 LQVAVKTL-PEVCSEQDELD-FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGG 133
Query: 236 DLRAFLK--RKGALKPST-----AVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAY 288
DL++FL+ R +PS+ + A DIA G YL EN IHRD+
Sbjct: 134 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIA-------- 182
Query: 289 WQNDRNILRDDSGNLKVA---DFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
RN L G +VA DFG+++ + R C +++ PE F + +
Sbjct: 183 ---ARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS 239
Query: 345 KVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARGLKELIE 401
K D +SF ++L E+ G P+ K + EV + R PP P +Y ++
Sbjct: 240 KTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMT 294
Query: 402 ECWNEKPAKRPTFRQIITRLE 422
+CW +P RP F I+ R+E
Sbjct: 295 QCWQHQPEDRPNFAIILERIE 315
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 123/261 (47%), Gaps = 35/261 (13%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+QVAVK L EV S+ D + F E ++ K H N+V+ +G QS P I+ E + G
Sbjct: 61 LQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGG 118
Query: 236 DLRAFLK--RKGALKPST-----AVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAY 288
DL++FL+ R +PS+ + A DIA G YL EN IHRD+
Sbjct: 119 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIA-------- 167
Query: 289 WQNDRNILRDDSGNLKVA---DFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
RN L G +VA DFG+++ + R C +++ PE F + +
Sbjct: 168 ---ARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS 224
Query: 345 KVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARGLKELIE 401
K D +SF ++L E+ G P+ K + EV + R PP P +Y ++
Sbjct: 225 KTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMT 279
Query: 402 ECWNEKPAKRPTFRQIITRLE 422
+CW +P RP F I+ R+E
Sbjct: 280 QCWQHQPEDRPNFAIILERIE 300
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 123/261 (47%), Gaps = 35/261 (13%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+QVAVK L EV S+ D + F E ++ K H N+V+ +G QS P I+ E + G
Sbjct: 76 LQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGG 133
Query: 236 DLRAFLK--RKGALKPST-----AVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAY 288
DL++FL+ R +PS+ + A DIA G YL EN IHRD+
Sbjct: 134 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIA-------- 182
Query: 289 WQNDRNILRDDSGNLKVA---DFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
RN L G +VA DFG+++ + R C +++ PE F + +
Sbjct: 183 ---ARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS 239
Query: 345 KVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARGLKELIE 401
K D +SF ++L E+ G P+ K + EV + R PP P +Y ++
Sbjct: 240 KTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMT 294
Query: 402 ECWNEKPAKRPTFRQIITRLE 422
+CW +P RP F I+ R+E
Sbjct: 295 QCWQHQPEDRPNFAIILERIE 315
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 123/261 (47%), Gaps = 35/261 (13%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+QVAVK L EV S+ D + F E ++ K H N+V+ +G QS P I+ E + G
Sbjct: 68 LQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 125
Query: 236 DLRAFLK--RKGALKPST-----AVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAY 288
DL++FL+ R +PS+ + A DIA G YL EN IHRD+
Sbjct: 126 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIA-------- 174
Query: 289 WQNDRNILRDDSGNLKVA---DFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
RN L G +VA DFG+++ + R C +++ PE F + +
Sbjct: 175 ---ARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS 231
Query: 345 KVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARGLKELIE 401
K D +SF ++L E+ G P+ K + EV + R PP P +Y ++
Sbjct: 232 KTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMT 286
Query: 402 ECWNEKPAKRPTFRQIITRLE 422
+CW +P RP F I+ R+E
Sbjct: 287 QCWQHQPEDRPNFAIILERIE 307
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 123/261 (47%), Gaps = 35/261 (13%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+QVAVK L EV S+ D + F E ++ K H N+V+ +G QS P I+ E + G
Sbjct: 53 LQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 110
Query: 236 DLRAFLK--RKGALKPST-----AVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAY 288
DL++FL+ R +PS+ + A DIA G YL EN IHRD+
Sbjct: 111 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIA-------- 159
Query: 289 WQNDRNILRDDSGNLKVA---DFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
RN L G +VA DFG+++ + R C +++ PE F + +
Sbjct: 160 ---ARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS 216
Query: 345 KVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARGLKELIE 401
K D +SF ++L E+ G P+ K + EV + R PP P +Y ++
Sbjct: 217 KTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMT 271
Query: 402 ECWNEKPAKRPTFRQIITRLE 422
+CW +P RP F I+ R+E
Sbjct: 272 QCWQHQPEDRPNFAIILERIE 292
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 123/261 (47%), Gaps = 35/261 (13%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+QVAVK L EV S+ D + F E ++ K H N+V+ +G QS P I+ E + G
Sbjct: 62 LQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 119
Query: 236 DLRAFLK--RKGALKPST-----AVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAY 288
DL++FL+ R +PS+ + A DIA G YL EN IHRD+
Sbjct: 120 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIA-------- 168
Query: 289 WQNDRNILRDDSGNLKVA---DFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
RN L G +VA DFG+++ + R C +++ PE F + +
Sbjct: 169 ---ARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS 225
Query: 345 KVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARGLKELIE 401
K D +SF ++L E+ G P+ K + EV + R PP P +Y ++
Sbjct: 226 KTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMT 280
Query: 402 ECWNEKPAKRPTFRQIITRLE 422
+CW +P RP F I+ R+E
Sbjct: 281 QCWQHQPEDRPNFAIILERIE 301
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 123/261 (47%), Gaps = 35/261 (13%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+QVAVK L EV S+ D + F E ++ K H N+V+ +G QS P I+ E + G
Sbjct: 61 LQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 118
Query: 236 DLRAFLK--RKGALKPST-----AVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAY 288
DL++FL+ R +PS+ + A DIA G YL EN IHRD+
Sbjct: 119 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIA-------- 167
Query: 289 WQNDRNILRDDSGNLKVA---DFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
RN L G +VA DFG+++ + R C +++ PE F + +
Sbjct: 168 ---ARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS 224
Query: 345 KVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARGLKELIE 401
K D +SF ++L E+ G P+ K + EV + R PP P +Y ++
Sbjct: 225 KTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMT 279
Query: 402 ECWNEKPAKRPTFRQIITRLE 422
+CW +P RP F I+ R+E
Sbjct: 280 QCWQHQPEDRPNFAIILERIE 300
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 123/261 (47%), Gaps = 35/261 (13%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+QVAVK L EV S+ D + F E ++ K H N+V+ +G QS P I+ E + G
Sbjct: 78 LQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 135
Query: 236 DLRAFLK--RKGALKPST-----AVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAY 288
DL++FL+ R +PS+ + A DIA G YL EN IHRD+
Sbjct: 136 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIA-------- 184
Query: 289 WQNDRNILRDDSGNLKVA---DFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
RN L G +VA DFG+++ + R C +++ PE F + +
Sbjct: 185 ---ARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS 241
Query: 345 KVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARGLKELIE 401
K D +SF ++L E+ G P+ K + EV + R PP P +Y ++
Sbjct: 242 KTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMT 296
Query: 402 ECWNEKPAKRPTFRQIITRLE 422
+CW +P RP F I+ R+E
Sbjct: 297 QCWQHQPEDRPNFAIILERIE 317
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 123/261 (47%), Gaps = 35/261 (13%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+QVAVK L EV S+ D + F E ++ K H N+V+ +G QS P I+ E + G
Sbjct: 88 LQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 145
Query: 236 DLRAFLK--RKGALKPST-----AVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAY 288
DL++FL+ R +PS+ + A DIA G YL EN IHRD+
Sbjct: 146 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIA-------- 194
Query: 289 WQNDRNILRDDSGNLKVA---DFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
RN L G +VA DFG+++ + R C +++ PE F + +
Sbjct: 195 ---ARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS 251
Query: 345 KVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARGLKELIE 401
K D +SF ++L E+ G P+ K + EV + R PP P +Y ++
Sbjct: 252 KTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMT 306
Query: 402 ECWNEKPAKRPTFRQIITRLE 422
+CW +P RP F I+ R+E
Sbjct: 307 QCWQHQPEDRPNFAIILERIE 327
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 133/276 (48%), Gaps = 29/276 (10%)
Query: 159 NSVEITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGA 218
+S E+ G + R + VA+K L + + + R F E +++ + HPN+++ G
Sbjct: 61 DSGEVCYGRLRVPGQRDVPVAIKAL--KAGYTERQRRDFLSEASIMGQFDHPNIIRLEGV 118
Query: 219 VTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHR 277
VT+ MIVTEY+ G L FL+ G V + GM YL + + +HR
Sbjct: 119 VTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHR 175
Query: 278 DLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYV 332
DL RN+L D + KV+DFG+S++L ED P T+ R+
Sbjct: 176 DLAA-----------RNVLVDSNLVCKVSDFGLSRVL---EDDPDAAXTTTGGKIPIRWT 221
Query: 333 APEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKL 391
APE + + DV+SF +++ E++ G P+ + +V + R P AP
Sbjct: 222 APEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLP--APMGC 279
Query: 392 YARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
L +L+ +CW++ A+RP F QI++ L+++ S
Sbjct: 280 -PHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 123/261 (47%), Gaps = 35/261 (13%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+QVAVK L EV S+ D + F E ++ K H N+V+ +G QS P I+ E + G
Sbjct: 62 LQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 119
Query: 236 DLRAFLK--RKGALKPST-----AVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAY 288
DL++FL+ R +PS+ + A DIA G YL EN IHRD+
Sbjct: 120 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIA-------- 168
Query: 289 WQNDRNILRDDSGNLKVA---DFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
RN L G +VA DFG+++ + R C +++ PE F + +
Sbjct: 169 ---ARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS 225
Query: 345 KVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARGLKELIE 401
K D +SF ++L E+ G P+ K + EV + R PP P +Y ++
Sbjct: 226 KTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMT 280
Query: 402 ECWNEKPAKRPTFRQIITRLE 422
+CW +P RP F I+ R+E
Sbjct: 281 QCWQHQPEDRPNFAIILERIE 301
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 133/276 (48%), Gaps = 29/276 (10%)
Query: 159 NSVEITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGA 218
+S E+ G + R + VA+K L + + + R F E +++ + HPN+++ G
Sbjct: 61 DSGEVCYGRLRVPGQRDVPVAIKAL--KAGYTERQRRDFLSEASIMGQFDHPNIIRLEGV 118
Query: 219 VTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHR 277
VT+ MIVTEY+ G L FL+ G V + GM YL + + +HR
Sbjct: 119 VTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHR 175
Query: 278 DLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYV 332
DL RN+L D + KV+DFG+S++L ED P T+ R+
Sbjct: 176 DLAA-----------RNVLVDSNLVCKVSDFGLSRVL---EDDPDAAYTTTGGKIPIRWT 221
Query: 333 APEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKL 391
APE + + DV+SF +++ E++ G P+ + +V + R P AP
Sbjct: 222 APEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLP--APMGC 279
Query: 392 YARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
L +L+ +CW++ A+RP F QI++ L+++ S
Sbjct: 280 -PHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 123/261 (47%), Gaps = 35/261 (13%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+QVAVK L EV S+ D + F E ++ K H N+V+ +G QS P I+ E + G
Sbjct: 102 LQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 159
Query: 236 DLRAFLK--RKGALKPST-----AVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAY 288
DL++FL+ R +PS+ + A DIA G YL EN IHRD+
Sbjct: 160 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIA-------- 208
Query: 289 WQNDRNILRDDSGNLKVA---DFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
RN L G +VA DFG+++ + R C +++ PE F + +
Sbjct: 209 ---ARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTS 265
Query: 345 KVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARGLKELIE 401
K D +SF ++L E+ G P+ K + EV + R PP P +Y ++
Sbjct: 266 KTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMT 320
Query: 402 ECWNEKPAKRPTFRQIITRLE 422
+CW +P RP F I+ R+E
Sbjct: 321 QCWQHQPEDRPNFAIILERIE 341
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 123/261 (47%), Gaps = 35/261 (13%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+QVAVK L EV S+ D + F E ++ K H N+V+ +G QS P I+ E + G
Sbjct: 79 LQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 136
Query: 236 DLRAFLK--RKGALKPST-----AVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAY 288
DL++FL+ R +PS+ + A DIA G YL EN IHRD+
Sbjct: 137 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIA-------- 185
Query: 289 WQNDRNILRDDSGNLKVA---DFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
RN L G +VA DFG+++ + R C +++ PE F + +
Sbjct: 186 ---ARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTS 242
Query: 345 KVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARGLKELIE 401
K D +SF ++L E+ G P+ K + EV + R PP P +Y ++
Sbjct: 243 KTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMT 297
Query: 402 ECWNEKPAKRPTFRQIITRLE 422
+CW +P RP F I+ R+E
Sbjct: 298 QCWQHQPEDRPNFAIILERIE 318
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 123/261 (47%), Gaps = 35/261 (13%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+QVAVK L EV S+ D + F E ++ K H N+V+ +G QS P I+ E + G
Sbjct: 76 LQVAVKTL-PEVYSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 133
Query: 236 DLRAFLK--RKGALKPST-----AVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAY 288
DL++FL+ R +PS+ + A DIA G YL EN IHRD+
Sbjct: 134 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIA-------- 182
Query: 289 WQNDRNILRDDSGNLKVA---DFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
RN L G +VA DFG+++ + R C +++ PE F + +
Sbjct: 183 ---ARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS 239
Query: 345 KVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARGLKELIE 401
K D +SF ++L E+ G P+ K + EV + R PP P +Y ++
Sbjct: 240 KTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMT 294
Query: 402 ECWNEKPAKRPTFRQIITRLE 422
+CW +P RP F I+ R+E
Sbjct: 295 QCWQHQPEDRPNFAIILERIE 315
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 129/254 (50%), Gaps = 34/254 (13%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+VAVK L +S V+AF +E L++ ++H +V+ VT+ P+ I+TEY+ KG
Sbjct: 39 KVAVKTLKPGTMS----VQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGS 94
Query: 237 LRAFLK--RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L FLK G + + F+ IA GM Y+ IHRDL + N
Sbjct: 95 LLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAA-----------N 140
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFSF 351
+L +S K+ADFG+++++ ED T ++ + ++ APE + K DV+SF
Sbjct: 141 VLVSESLMCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSF 197
Query: 352 ALILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPF--KAPAKLYARGLKELIEECWNEKP 408
++L E++ G P+ + + +V A + R P P +LY ++++ CW EK
Sbjct: 198 GILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDELY-----DIMKMCWKEKA 252
Query: 409 AKRPTFRQIITRLE 422
+RPTF + + L+
Sbjct: 253 EERPTFDYLQSVLD 266
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 122/262 (46%), Gaps = 48/262 (18%)
Query: 196 AFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKG----ALKPS 250
A EL +L + H N+V LGA T P +++TEY GDL FL+RK K S
Sbjct: 90 ALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 149
Query: 251 TAV--------------RFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
A+ F+ +A+GM +L IHRDL RNIL
Sbjct: 150 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAA-----------RNIL 195
Query: 297 RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFSFAL 353
K+ DFG+++ +K D + + +++APE N Y + DV+S+ +
Sbjct: 196 LTHGRITKICDFGLAR--DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 253
Query: 354 ILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPA 409
L E+ G P+ M D++ K R P APA++Y ++++ CW+ P
Sbjct: 254 FLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMY-----DIMKTCWDADPL 308
Query: 410 KRPTFRQIITRLE-SINNSINH 430
KRPTF+QI+ +E I+ S NH
Sbjct: 309 KRPTFKQIVQLIEKQISESTNH 330
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 125/261 (47%), Gaps = 26/261 (9%)
Query: 166 GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + W G +VA+K L +S + +F +E +++K++H +VQ L AV P
Sbjct: 23 GEVWMGTWNGNTKVAIKTLKPGTMSPE----SFLEEAQIMKKLKHDKLVQ-LYAVVSEEP 77
Query: 225 MMIVTEYLPKGDLRAFLK--RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+ IVTEY+ KG L FLK ALK V A +A GM Y+ + IHRDL +
Sbjct: 78 IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSA 134
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY 342
NIL + K+ADFG+++L+ E ++ APE +
Sbjct: 135 -----------NILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRF 183
Query: 343 DTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 401
K DV+SF ++L E++ +G P+ ++ EV + R P + L EL+
Sbjct: 184 TIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPI---SLHELMI 240
Query: 402 ECWNEKPAKRPTFRQIITRLE 422
CW + P +RPTF + + LE
Sbjct: 241 HCWKKDPEERPTFEYLQSFLE 261
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 122/262 (46%), Gaps = 48/262 (18%)
Query: 196 AFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKG----ALKPS 250
A EL +L + H N+V LGA T P +++TEY GDL FL+RK K S
Sbjct: 88 ALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 147
Query: 251 TAV--------------RFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
A+ F+ +A+GM +L IHRDL RNIL
Sbjct: 148 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAA-----------RNIL 193
Query: 297 RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFSFAL 353
K+ DFG+++ +K D + + +++APE N Y + DV+S+ +
Sbjct: 194 LTHGRITKICDFGLAR--DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 251
Query: 354 ILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPA 409
L E+ G P+ M D++ K R P APA++Y ++++ CW+ P
Sbjct: 252 FLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMY-----DIMKTCWDADPL 306
Query: 410 KRPTFRQIITRLE-SINNSINH 430
KRPTF+QI+ +E I+ S NH
Sbjct: 307 KRPTFKQIVQLIEKQISESTNH 328
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 122/262 (46%), Gaps = 48/262 (18%)
Query: 196 AFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKG----ALKPS 250
A EL +L + H N+V LGA T P +++TEY GDL FL+RK K S
Sbjct: 72 ALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 131
Query: 251 TAV--------------RFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
A+ F+ +A+GM +L IHRDL RNIL
Sbjct: 132 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAA-----------RNIL 177
Query: 297 RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFSFAL 353
K+ DFG+++ +K D + + +++APE N Y + DV+S+ +
Sbjct: 178 LTHGRITKICDFGLAR--DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 235
Query: 354 ILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPA 409
L E+ G P+ M D++ K R P APA++Y ++++ CW+ P
Sbjct: 236 FLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMY-----DIMKTCWDADPL 290
Query: 410 KRPTFRQIITRLE-SINNSINH 430
KRPTF+QI+ +E I+ S NH
Sbjct: 291 KRPTFKQIVQLIEKQISESTNH 312
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 122/262 (46%), Gaps = 48/262 (18%)
Query: 196 AFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKG----ALKPS 250
A EL +L + H N+V LGA T P +++TEY GDL FL+RK K S
Sbjct: 95 ALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 154
Query: 251 TAV--------------RFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
A+ F+ +A+GM +L IHRDL RNIL
Sbjct: 155 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAA-----------RNIL 200
Query: 297 RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFSFAL 353
K+ DFG+++ +K D + + +++APE N Y + DV+S+ +
Sbjct: 201 LTHGRITKICDFGLAR--DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 258
Query: 354 ILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPA 409
L E+ G P+ M D++ K R P APA++Y ++++ CW+ P
Sbjct: 259 FLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMY-----DIMKTCWDADPL 313
Query: 410 KRPTFRQIITRLE-SINNSINH 430
KRPTF+QI+ +E I+ S NH
Sbjct: 314 KRPTFKQIVQLIEKQISESTNH 335
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 122/262 (46%), Gaps = 48/262 (18%)
Query: 196 AFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKG----ALKPS 250
A EL +L + H N+V LGA T P +++TEY GDL FL+RK K S
Sbjct: 95 ALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 154
Query: 251 TAV--------------RFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
A+ F+ +A+GM +L IHRDL RNIL
Sbjct: 155 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAA-----------RNIL 200
Query: 297 RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFSFAL 353
K+ DFG+++ +K D + + +++APE N Y + DV+S+ +
Sbjct: 201 LTHGRITKICDFGLAR--HIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 258
Query: 354 ILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPA 409
L E+ G P+ M D++ K R P APA++Y ++++ CW+ P
Sbjct: 259 FLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMY-----DIMKTCWDADPL 313
Query: 410 KRPTFRQIITRLE-SINNSINH 430
KRPTF+QI+ +E I+ S NH
Sbjct: 314 KRPTFKQIVQLIEKQISESTNH 335
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 120/241 (49%), Gaps = 26/241 (10%)
Query: 192 DRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL-RAFLKRKGALKPS 250
++ + F+ E+ ++ + HPN+V+ G + +P +V E++P GDL L + +K S
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWS 122
Query: 251 TAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGV 310
+R LDIA G+ Y+ P PI+HRDL ++++ + + KVADFG+
Sbjct: 123 VKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCA------KVADFGL 175
Query: 311 SKLLTVKEDRPLTCQDTSCRYVAPEVFKNEE--YDTKVDVFSFALILQEMIEGCPPFTMK 368
S+ + ++ + +++APE EE Y K D +SFA+IL ++ G PF
Sbjct: 176 SQ----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY 231
Query: 369 HDNEVPKAYAARQ---RP--PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 423
++ R+ RP P P +L + +IE CW+ P KRP F I+ L
Sbjct: 232 SYGKIKFINMIREEGLRPTIPEDCPPRL-----RNVIELCWSGDPKKRPHFSYIVKELSE 286
Query: 424 I 424
+
Sbjct: 287 L 287
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 128/272 (47%), Gaps = 42/272 (15%)
Query: 174 RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYL 232
R +VAVK L + D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 59 RVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 233 PKGDLRAFLKRKG------ALKPS----------TAVRFALDIARGMNYLHENKPVPIIH 276
KG+LR +L+ + + PS V A +ARGM YL K IH
Sbjct: 117 SKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 173
Query: 277 RDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPE 335
RDL RN+L + +K+ADFG+++ + + + T +++APE
Sbjct: 174 RDLAA-----------RNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPE 222
Query: 336 VFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLY 392
+ Y + DV+SF ++L E+ G P+ E+ K R P +LY
Sbjct: 223 ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELY 282
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++ +CW+ P++RPTF+Q++ L+ I
Sbjct: 283 M-----MMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 119/241 (49%), Gaps = 26/241 (10%)
Query: 192 DRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL-RAFLKRKGALKPS 250
++ + F+ E+ ++ + HPN+V+ G + +P +V E++P GDL L + +K S
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWS 122
Query: 251 TAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGV 310
+R LDIA G+ Y+ P PI+HRDL ++++ + + KVADFG
Sbjct: 123 VKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCA------KVADFGT 175
Query: 311 SKLLTVKEDRPLTCQDTSCRYVAPEVFKNEE--YDTKVDVFSFALILQEMIEGCPPFTMK 368
S+ + ++ + +++APE EE Y K D +SFA+IL ++ G PF
Sbjct: 176 SQ----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY 231
Query: 369 HDNEVPKAYAARQ---RP--PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 423
++ R+ RP P P +L + +IE CW+ P KRP F I+ L
Sbjct: 232 SYGKIKFINMIREEGLRPTIPEDCPPRL-----RNVIELCWSGDPKKRPHFSYIVKELSE 286
Query: 424 I 424
+
Sbjct: 287 L 287
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 145/316 (45%), Gaps = 41/316 (12%)
Query: 138 HVKHAREVPEYE---IDPHELDFTNSVEITKGTFILAFWRGIQ------VAVKKLGEEVI 188
H A +VP + DP EL FT I KG+F F +GI VA+K + ++
Sbjct: 4 HSPVAVQVPGMQNNIADPEEL-FTKLERIGKGSFGEVF-KGIDNRTQQVVAIKII--DLE 59
Query: 189 SDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK 248
+D + + E+ +L + V ++ G+ + S + I+ EYL G L R G
Sbjct: 60 EAEDEIEDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLL-RAGPFD 118
Query: 249 PSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADF 308
+I +G++YLH K IHRD++ + N+L + G++K+ADF
Sbjct: 119 EFQIATMLKEILKGLDYLHSEKK---IHRDIKAA-----------NVLLSEQGDVKLADF 164
Query: 309 GVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMK 368
GV+ LT + + T T ++APEV + YD+K D++S + E+ +G PP +
Sbjct: 165 GVAGQLTDTQIKRNTFVGTPF-WMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDM 223
Query: 369 HDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS- 427
H V P + + KE I+ C N+ P+ RPT ++++ + NS
Sbjct: 224 HPMRVLFLIPKNNPPTLVGD---FTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNSK 280
Query: 428 --------INHKRRWK 435
I+ +RWK
Sbjct: 281 KTSYLTELIDRFKRWK 296
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 129/254 (50%), Gaps = 34/254 (13%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+VAVK L +S V+AF +E L++ ++H +V+ VT+ P+ I+TE++ KG
Sbjct: 38 KVAVKTLKPGTMS----VQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGS 93
Query: 237 LRAFLK--RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L FLK G + + F+ IA GM Y+ IHRDL + N
Sbjct: 94 LLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAA-----------N 139
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFSF 351
+L +S K+ADFG+++++ ED T ++ + ++ APE + K +V+SF
Sbjct: 140 VLVSESLMCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSF 196
Query: 352 ALILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPF--KAPAKLYARGLKELIEECWNEKP 408
++L E++ G P+ + + +V A + R P P +LY ++++ CW EK
Sbjct: 197 GILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDELY-----DIMKMCWKEKA 251
Query: 409 AKRPTFRQIITRLE 422
+RPTF + + L+
Sbjct: 252 EERPTFDYLQSVLD 265
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 112/238 (47%), Gaps = 27/238 (11%)
Query: 195 RAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAV 253
R F E +++ + HPN+++ G VT S P+MI+TE++ G L +FL+ G V
Sbjct: 62 REFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLV 121
Query: 254 RFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKL 313
IA GM YL E + +HRDL RNIL + + KV+DFG+S+
Sbjct: 122 GMLRGIASGMRYLAE---MSYVHRDLAA-----------RNILVNSNLVCKVSDFGLSRF 167
Query: 314 LTVKEDRPLTCQDTS----CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMK 368
L P R+ APE ++ + D +S+ +++ E++ G P+
Sbjct: 168 LEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDM 227
Query: 369 HDNEVPKAYAARQR--PPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+ +V A R PP P L+ +L+ +CW + RP F Q+++ L+ +
Sbjct: 228 SNQDVINAIEQDYRLPPPPDCPTSLH-----QLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 144/301 (47%), Gaps = 38/301 (12%)
Query: 150 IDPHELDFTNSVEITKGTFILAFWRGIQ------VAVKKLGEEVISDDDRVRAFRDELAL 203
+DP EL FT I KG+F ++GI VA+K + ++ +D + + E+ +
Sbjct: 15 VDPEEL-FTKLDRIGKGSF-GEVYKGIDNHTKEVVAIKII--DLEEAEDEIEDIQQEITV 70
Query: 204 LQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGM 263
L + P + ++ G+ +S+ + I+ EYL G LK G L+ + +I +G+
Sbjct: 71 LSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLK-PGPLEETYIATILREILKGL 129
Query: 264 NYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLT 323
+YLH + IHRD++ + N+L + G++K+ADFGV+ LT + +
Sbjct: 130 DYLHSERK---IHRDIKAA-----------NVLLSEQGDVKLADFGVAGQLTDTQIKRNX 175
Query: 324 CQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRP 383
T ++APEV K YD K D++S + E+ +G PP + H V P
Sbjct: 176 FVGTPF-WMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPP 234
Query: 384 PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI-----ITRLES----INNSINHKRRW 434
+ +++ KE +E C N+ P RPT +++ ITR + I+ +RW
Sbjct: 235 TLEGQ---HSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYTKKTSFLTELIDRYKRW 291
Query: 435 K 435
K
Sbjct: 292 K 292
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 112/238 (47%), Gaps = 27/238 (11%)
Query: 195 RAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAV 253
R F E +++ + HPN+++ G VT S P+MI+TE++ G L +FL+ G V
Sbjct: 60 REFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLV 119
Query: 254 RFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKL 313
IA GM YL E + +HRDL RNIL + + KV+DFG+S+
Sbjct: 120 GMLRGIASGMRYLAE---MSYVHRDLAA-----------RNILVNSNLVCKVSDFGLSRF 165
Query: 314 LTVKEDRPLTCQDTS----CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMK 368
L P R+ APE ++ + D +S+ +++ E++ G P+
Sbjct: 166 LEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDM 225
Query: 369 HDNEVPKAYAARQR--PPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+ +V A R PP P L+ +L+ +CW + RP F Q+++ L+ +
Sbjct: 226 SNQDVINAIEQDYRLPPPPDCPTSLH-----QLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 174 RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYL 232
R +VAVK L + D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 52 RVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 109
Query: 233 PKGDLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
KG+LR +L+ + L V A +ARGM YL K IH
Sbjct: 110 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 166
Query: 277 RDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPE 335
RDL RN+L + +K+ADFG+++ + + + T +++APE
Sbjct: 167 RDLAA-----------RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE 215
Query: 336 VFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLY 392
+ Y + DV+SF ++L E+ G P+ E+ K R P +LY
Sbjct: 216 ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELY 275
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++ +CW+ P++RPTF+Q++ L+ I
Sbjct: 276 M-----MMRDCWHAVPSQRPTFKQLVEDLDRI 302
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 174 RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYL 232
R +VAVK L + D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 51 RVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 108
Query: 233 PKGDLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
KG+LR +L+ + L V A +ARGM YL K IH
Sbjct: 109 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 165
Query: 277 RDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPE 335
RDL RN+L + +K+ADFG+++ + + + T +++APE
Sbjct: 166 RDLAA-----------RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE 214
Query: 336 VFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLY 392
+ Y + DV+SF ++L E+ G P+ E+ K R P +LY
Sbjct: 215 ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELY 274
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++ +CW+ P++RPTF+Q++ L+ I
Sbjct: 275 M-----MMRDCWHAVPSQRPTFKQLVEDLDRI 301
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 174 RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYL 232
R +VAVK L + D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 59 RVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 233 PKGDLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
KG+LR +L+ + L V A +ARGM YL K IH
Sbjct: 117 SKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 173
Query: 277 RDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPE 335
RDL RN+L + +K+ADFG+++ + + + T +++APE
Sbjct: 174 RDLAA-----------RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE 222
Query: 336 VFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLY 392
+ Y + DV+SF ++L E+ G P+ E+ K R P +LY
Sbjct: 223 ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELY 282
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++ +CW+ P++RPTF+Q++ L+ I
Sbjct: 283 M-----MMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 174 RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYL 232
R +VAVK L + D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 48 RVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 105
Query: 233 PKGDLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
KG+LR +L+ + L V A +ARGM YL K IH
Sbjct: 106 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 162
Query: 277 RDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPE 335
RDL RN+L + +K+ADFG+++ + + + T +++APE
Sbjct: 163 RDLAA-----------RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE 211
Query: 336 VFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLY 392
+ Y + DV+SF ++L E+ G P+ E+ K R P +LY
Sbjct: 212 ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELY 271
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++ +CW+ P++RPTF+Q++ L+ I
Sbjct: 272 M-----MMRDCWHAVPSQRPTFKQLVEDLDRI 298
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 174 RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYL 232
R +VAVK L + D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 59 RVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 233 PKGDLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
KG+LR +L+ + L V A +ARGM YL K IH
Sbjct: 117 SKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 173
Query: 277 RDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPE 335
RDL RN+L + +K+ADFG+++ + + + T +++APE
Sbjct: 174 RDLAA-----------RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE 222
Query: 336 VFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLY 392
+ Y + DV+SF ++L E+ G P+ E+ K R P +LY
Sbjct: 223 ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELY 282
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++ +CW+ P++RPTF+Q++ L+ I
Sbjct: 283 M-----MMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 174 RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYL 232
R +VAVK L + D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 59 RVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 233 PKGDLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
KG+LR +L+ + L V A +ARGM YL K IH
Sbjct: 117 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 173
Query: 277 RDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPE 335
RDL RN+L + +K+ADFG+++ + + + T +++APE
Sbjct: 174 RDLAA-----------RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE 222
Query: 336 VFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLY 392
+ Y + DV+SF ++L E+ G P+ E+ K R P +LY
Sbjct: 223 ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELY 282
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++ +CW+ P++RPTF+Q++ L+ I
Sbjct: 283 M-----MMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 174 RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYL 232
R +VAVK L + D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 44 RVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 101
Query: 233 PKGDLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
KG+LR +L+ + L V A +ARGM YL K IH
Sbjct: 102 SKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 158
Query: 277 RDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPE 335
RDL RN+L + +K+ADFG+++ + + + T +++APE
Sbjct: 159 RDLAA-----------RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE 207
Query: 336 VFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLY 392
+ Y + DV+SF ++L E+ G P+ E+ K R P +LY
Sbjct: 208 ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELY 267
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++ +CW+ P++RPTF+Q++ L+ I
Sbjct: 268 M-----MMRDCWHAVPSQRPTFKQLVEDLDRI 294
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 174 RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYL 232
R +VAVK L + D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 100 RVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 157
Query: 233 PKGDLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
KG+LR +L+ + L V A +ARGM YL K IH
Sbjct: 158 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 214
Query: 277 RDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPE 335
RDL RN+L + +K+ADFG+++ + + + T +++APE
Sbjct: 215 RDLAA-----------RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE 263
Query: 336 VFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLY 392
+ Y + DV+SF ++L E+ G P+ E+ K R P +LY
Sbjct: 264 ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELY 323
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++ +CW+ P++RPTF+Q++ L+ I
Sbjct: 324 M-----MMRDCWHAVPSQRPTFKQLVEDLDRI 350
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 134/277 (48%), Gaps = 35/277 (12%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 244
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IVTEY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 245 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNY 301
Query: 275 IHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRY 331
+HRDL + NIL ++ KVADFG+++L+ ED T + + ++
Sbjct: 302 VHRDLRAA-----------NILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKW 347
Query: 332 VAPEVFKNEEYDTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAK 390
APE + K DV+SF ++L E+ +G P+ + EV R P P +
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPE 405
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
L +L+ +CW ++P +RPTF + LE S
Sbjct: 406 C-PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 134/277 (48%), Gaps = 35/277 (12%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 244
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IVTEY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 245 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNY 301
Query: 275 IHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRY 331
+HRDL + NIL ++ KVADFG+++L+ ED T + + ++
Sbjct: 302 VHRDLRAA-----------NILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKW 347
Query: 332 VAPEVFKNEEYDTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAK 390
APE + K DV+SF ++L E+ +G P+ + EV R P P +
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPE 405
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
L +L+ +CW ++P +RPTF + LE S
Sbjct: 406 C-PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 149/294 (50%), Gaps = 35/294 (11%)
Query: 148 YEIDPHELDFTNSVEITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRDELALL 204
+EI+ E+ S I G+F + W G VAVK L + V ++ +AFR+E+A+L
Sbjct: 31 WEIEASEVML--STRIGSGSFGTVYKGKWHG-DVAVKIL-KVVDPTPEQFQAFRNEVAVL 86
Query: 205 QKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDIARGM 263
+K RH N++ F+G +T+ + + IVT++ L L ++ + + A A+GM
Sbjct: 87 RKTRHVNILLFMGYMTKDN-LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGM 145
Query: 264 NYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLT 323
+YLH IIHRD++ + NI + +K+ DFG++ + +
Sbjct: 146 DYLHAKN---IIHRDMKSN-----------NIFLHEGLTVKIGDFGLATVKSRWSGSQQV 191
Query: 324 CQDT-SCRYVAPEVFK---NEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNE-----VP 374
Q T S ++APEV + N + + DV+S+ ++L E++ G P++ ++ + V
Sbjct: 192 EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVG 251
Query: 375 KAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 428
+ YA+ P K + +K L+ +C + +RP F QI++ +E + +S+
Sbjct: 252 RGYAS---PDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 133/278 (47%), Gaps = 37/278 (13%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 14 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 68
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IVTEY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 69 YAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNY 125
Query: 275 IHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAP 334
+HRDL + NIL ++ KVADFG+++L+ E ++ AP
Sbjct: 126 VHRDLRAA-----------NILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAP 174
Query: 335 EVFKNEEYDTKVDVFSFALILQEM-IEGCPPFTMKHDNE----VPKAYAARQRPPFKAPA 389
E + K DV+SF ++L E+ +G P+ + E V + Y R P + P
Sbjct: 175 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY--RMPCPPECPE 232
Query: 390 KLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
L+ +L+ +CW ++P +RPTF + LE S
Sbjct: 233 SLH-----DLMCQCWRKEPEERPTFEYLQAFLEDYFTS 265
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 128/271 (47%), Gaps = 42/271 (15%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ VAVK L ++ D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 67 AVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 234 KGDLRAFL--KRKGALKPS--------------TAVRFALDIARGMNYLHENKPVPIIHR 277
KG+LR +L +R ++ S V +ARGM YL K IHR
Sbjct: 125 KGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHR 181
Query: 278 DLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEV 336
DL RN+L ++ +K+ADFG+++ + + + T +++APE
Sbjct: 182 DLAA-----------RNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEA 230
Query: 337 FKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYA 393
+ Y + DV+SF +++ E+ G P+ E+ K R P +LY
Sbjct: 231 LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM 290
Query: 394 RGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++ +CW+ P++RPTF+Q++ L+ I
Sbjct: 291 -----MMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 128/271 (47%), Gaps = 49/271 (18%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLPK 234
++VAVK L +D+ A EL ++ + +H N+V LGA T P++++TEY
Sbjct: 77 LKVAVKMLKSTAHADEKE--ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCY 134
Query: 235 GDLRAFLKRKG---------ALKPSTA-----VRFALDIARGMNYLHENKPVPIIHRDLE 280
GDL FL+RK A+ STA + F+ +A+GM +L IHRD+
Sbjct: 135 GDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVA 191
Query: 281 PSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVF 337
RN+L + K+ DFG+++ + D + + +++APE
Sbjct: 192 A-----------RNVLLTNGHVAKIGDFGLAR--DIMNDSNYIVKGNARLPVKWMAPESI 238
Query: 338 KNEEYDTKVDVFSFALILQEMIE-GCPPF-----TMKHDNEVPKAYAARQRPPFKAPAKL 391
+ Y + DV+S+ ++L E+ G P+ K V Y Q P F AP +
Sbjct: 239 FDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQ-PAF-APKNI 296
Query: 392 YARGLKELIEECWNEKPAKRPTFRQIITRLE 422
Y+ +++ CW +P RPTF+QI + L+
Sbjct: 297 YS-----IMQACWALEPTHRPTFQQICSFLQ 322
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 133/277 (48%), Gaps = 35/277 (12%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++KIRH +VQ L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKIRHEKLVQ-L 78
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IVTEY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 79 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 275 IHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRY 331
+HRDL + NIL ++ KVADFG+++L+ ED T + + ++
Sbjct: 136 VHRDLRAA-----------NILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKW 181
Query: 332 VAPEVFKNEEYDTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAK 390
APE + K DV+SF ++L E+ +G P+ + EV R P P +
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPE 239
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
L +L+ +CW + P +RPTF + LE S
Sbjct: 240 C-PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 134/277 (48%), Gaps = 35/277 (12%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 17 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 71
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IVTEY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 72 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNY 128
Query: 275 IHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRY 331
+HRDL + NIL ++ KVADFG+++L+ ED T + + ++
Sbjct: 129 VHRDLRAA-----------NILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKW 174
Query: 332 VAPEVFKNEEYDTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAK 390
APE + K DV+SF ++L E+ +G P+ + EV R P P +
Sbjct: 175 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPE 232
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
L +L+ +CW ++P +RPTF + LE S
Sbjct: 233 C-PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 268
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 119/241 (49%), Gaps = 26/241 (10%)
Query: 192 DRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL-RAFLKRKGALKPS 250
++ + F+ E+ ++ + HPN+V+ G + +P +V E++P GDL L + +K S
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWS 122
Query: 251 TAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGV 310
+R LDIA G+ Y+ P PI+HRDL ++++ + + KVADF +
Sbjct: 123 VKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCA------KVADFSL 175
Query: 311 SKLLTVKEDRPLTCQDTSCRYVAPEVFKNEE--YDTKVDVFSFALILQEMIEGCPPFTMK 368
S+ + ++ + +++APE EE Y K D +SFA+IL ++ G PF
Sbjct: 176 SQ----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY 231
Query: 369 HDNEVPKAYAARQ---RP--PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 423
++ R+ RP P P +L + +IE CW+ P KRP F I+ L
Sbjct: 232 SYGKIKFINMIREEGLRPTIPEDCPPRL-----RNVIELCWSGDPKKRPHFSYIVKELSE 286
Query: 424 I 424
+
Sbjct: 287 L 287
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 136/276 (49%), Gaps = 43/276 (15%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 273 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 327
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IVTEY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 328 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNY 384
Query: 275 IHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRY 331
+HRDL + NIL ++ KVADFG+++L+ ED T + + ++
Sbjct: 385 VHRDLRAA-----------NILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKW 430
Query: 332 VAPEVFKNEEYDTKVDVFSFALILQEM-IEGCPPFTMKHDNE----VPKAYAARQRPPFK 386
APE + K DV+SF ++L E+ +G P+ + E V + Y R P +
Sbjct: 431 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY--RMPCPPE 488
Query: 387 APAKLYARGLKELIEECWNEKPAKRPTFRQIITRLE 422
P L+ +L+ +CW ++P +RPTF + LE
Sbjct: 489 CPESLH-----DLMCQCWRKEPEERPTFEYLQAFLE 519
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 128/271 (47%), Gaps = 42/271 (15%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ VAVK L ++ D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 67 AVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 234 KGDLRAFL--KRKGALKPS--------------TAVRFALDIARGMNYLHENKPVPIIHR 277
KG+LR +L +R ++ S V +ARGM YL K IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHR 181
Query: 278 DLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEV 336
DL RN+L ++ +K+ADFG+++ + + + T +++APE
Sbjct: 182 DLAA-----------RNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEA 230
Query: 337 FKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYA 393
+ Y + DV+SF +++ E+ G P+ E+ K R P +LY
Sbjct: 231 LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM 290
Query: 394 RGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++ +CW+ P++RPTF+Q++ L+ I
Sbjct: 291 -----MMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 129/271 (47%), Gaps = 42/271 (15%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ VAVK L ++ +D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 67 AVTVAVKMLKDDATEED--LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 234 KGDLRAFL--KRKGALKPST--------------AVRFALDIARGMNYLHENKPVPIIHR 277
KG+LR +L +R ++ S V +ARGM YL K IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHR 181
Query: 278 DLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEV 336
DL RN+L ++ +K+ADFG+++ + + + T +++APE
Sbjct: 182 DLAA-----------RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEA 230
Query: 337 FKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYA 393
+ Y + DV+SF +++ E+ G P+ E+ K R P +LY
Sbjct: 231 LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM 290
Query: 394 RGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++ +CW+ P++RPTF+Q++ L+ I
Sbjct: 291 -----MMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 133/277 (48%), Gaps = 35/277 (12%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 78
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IVTEY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 79 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 275 IHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRY 331
+HRDL + NIL ++ KVADFG+++L+ ED T + + ++
Sbjct: 136 VHRDLRAA-----------NILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKW 181
Query: 332 VAPEVFKNEEYDTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAK 390
APE + K DV+SF ++L E+ +G P+ + EV R P P +
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPE 239
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
L +L+ +CW + P +RPTF + LE S
Sbjct: 240 C-PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 133/277 (48%), Gaps = 35/277 (12%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 78
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IVTEY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 79 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 275 IHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRY 331
+HRDL + NIL ++ KVADFG+++L+ ED T + + ++
Sbjct: 136 VHRDLAAA-----------NILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKW 181
Query: 332 VAPEVFKNEEYDTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAK 390
APE + K DV+SF ++L E+ +G P+ + EV R P P +
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPE 239
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
L +L+ +CW + P +RPTF + LE S
Sbjct: 240 C-PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 115/244 (47%), Gaps = 21/244 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G +VAVK L + I D V R E+ L+ RHP++++ ++ S + +V EY+
Sbjct: 41 GHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSG 100
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G+L ++ + G L + R I G++Y H + ++HRDL+P N
Sbjct: 101 GELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPE-----------N 146
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY-DTKVDVFSFAL 353
+L D N K+ADFG+S +++ E +C S Y APEV Y +VD++S +
Sbjct: 147 VLLDAHMNAKIADFGLSNMMSDGEFLRXSC--GSPNYAAPEVISGRLYAGPEVDIWSSGV 204
Query: 354 ILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPT 413
IL ++ G PF D+ VP + F P L + L++ P KR T
Sbjct: 205 ILYALLCGTLPFD---DDHVPTLFKKICDGIFYTPQYLNP-SVISLLKHMLQVDPMKRAT 260
Query: 414 FRQI 417
+ I
Sbjct: 261 IKDI 264
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 133/277 (48%), Gaps = 35/277 (12%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 15 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 69
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IVTEY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 70 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNY 126
Query: 275 IHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRY 331
+HRDL + NIL ++ KVADFG+++L+ ED T + + ++
Sbjct: 127 VHRDLRAA-----------NILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKW 172
Query: 332 VAPEVFKNEEYDTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAK 390
APE + K DV+SF ++L E+ +G P+ + EV R P P +
Sbjct: 173 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPE 230
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
L +L+ +CW + P +RPTF + LE S
Sbjct: 231 C-PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 266
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 133/277 (48%), Gaps = 35/277 (12%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 13 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 67
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IVTEY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 68 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNY 124
Query: 275 IHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRY 331
+HRDL + NIL ++ KVADFG+++L+ ED T + + ++
Sbjct: 125 VHRDLRAA-----------NILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKW 170
Query: 332 VAPEVFKNEEYDTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAK 390
APE + K DV+SF ++L E+ +G P+ + EV R P P +
Sbjct: 171 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPE 228
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
L +L+ +CW + P +RPTF + LE S
Sbjct: 229 C-PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 264
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 128/271 (47%), Gaps = 42/271 (15%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ VAVK L ++ D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 54 AVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 111
Query: 234 KGDLRAFL--KRKGALKPST--------------AVRFALDIARGMNYLHENKPVPIIHR 277
KG+LR +L +R ++ S V +ARGM YL K IHR
Sbjct: 112 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHR 168
Query: 278 DLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEV 336
DL RN+L ++ +K+ADFG+++ + + + T +++APE
Sbjct: 169 DL-----------TARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEA 217
Query: 337 FKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYA 393
+ Y + DV+SF +++ E+ G P+ E+ K R P +LY
Sbjct: 218 LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM 277
Query: 394 RGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++ +CW+ P++RPTF+Q++ L+ I
Sbjct: 278 -----MMRDCWHAVPSQRPTFKQLVEDLDRI 303
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 128/271 (47%), Gaps = 42/271 (15%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ VAVK L ++ D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 67 AVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYAS 124
Query: 234 KGDLRAFL--KRKGALKPST--------------AVRFALDIARGMNYLHENKPVPIIHR 277
KG+LR +L +R ++ S V +ARGM YL K IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHR 181
Query: 278 DLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEV 336
DL RN+L ++ +K+ADFG+++ + + + T +++APE
Sbjct: 182 DLAA-----------RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEA 230
Query: 337 FKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYA 393
+ Y + DV+SF +++ E+ G P+ E+ K R P +LY
Sbjct: 231 LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM 290
Query: 394 RGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++ +CW+ P++RPTF+Q++ L+ I
Sbjct: 291 -----MMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 128/271 (47%), Gaps = 42/271 (15%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ VAVK L ++ D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 59 AVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 116
Query: 234 KGDLRAFL--KRKGALKPST--------------AVRFALDIARGMNYLHENKPVPIIHR 277
KG+LR +L +R ++ S V +ARGM YL K IHR
Sbjct: 117 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHR 173
Query: 278 DLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEV 336
DL RN+L ++ +K+ADFG+++ + + + T +++APE
Sbjct: 174 DLAA-----------RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEA 222
Query: 337 FKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYA 393
+ Y + DV+SF +++ E+ G P+ E+ K R P +LY
Sbjct: 223 LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM 282
Query: 394 RGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++ +CW+ P++RPTF+Q++ L+ I
Sbjct: 283 -----MMRDCWHAVPSQRPTFKQLVEDLDRI 308
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 128/271 (47%), Gaps = 42/271 (15%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ VAVK L ++ D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 56 AVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 113
Query: 234 KGDLRAFL--KRKGALKPST--------------AVRFALDIARGMNYLHENKPVPIIHR 277
KG+LR +L +R ++ S V +ARGM YL K IHR
Sbjct: 114 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHR 170
Query: 278 DLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEV 336
DL RN+L ++ +K+ADFG+++ + + + T +++APE
Sbjct: 171 DLAA-----------RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEA 219
Query: 337 FKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYA 393
+ Y + DV+SF +++ E+ G P+ E+ K R P +LY
Sbjct: 220 LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM 279
Query: 394 RGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++ +CW+ P++RPTF+Q++ L+ I
Sbjct: 280 -----MMRDCWHAVPSQRPTFKQLVEDLDRI 305
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 134/277 (48%), Gaps = 35/277 (12%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 21 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 75
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IVTEY+ KG L FLK + L+ V + IA GM Y+ +
Sbjct: 76 YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNY 132
Query: 275 IHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRY 331
+HRDL + NIL ++ KVADFG+++L+ ED T + + ++
Sbjct: 133 VHRDLRAA-----------NILVGENLVCKVADFGLARLI---EDNEWTARQGAKFPIKW 178
Query: 332 VAPEVFKNEEYDTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAK 390
APE + K DV+SF ++L E+ +G P+ + EV R P P +
Sbjct: 179 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPE 236
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
L +L+ +CW ++P +RPTF + LE S
Sbjct: 237 C-PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 272
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 128/271 (47%), Gaps = 42/271 (15%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ VAVK L ++ D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 67 AVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 234 KGDLRAFL--KRKGALKPST--------------AVRFALDIARGMNYLHENKPVPIIHR 277
KG+LR +L +R ++ S V +ARGM YL K IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHR 181
Query: 278 DLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEV 336
DL RN+L ++ +K+ADFG+++ + + + T +++APE
Sbjct: 182 DLAA-----------RNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEA 230
Query: 337 FKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYA 393
+ Y + DV+SF +++ E+ G P+ E+ K R P +LY
Sbjct: 231 LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM 290
Query: 394 RGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++ +CW+ P++RPTF+Q++ L+ I
Sbjct: 291 -----MMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 134/277 (48%), Gaps = 35/277 (12%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 21 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 75
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IVTEY+ KG L FLK + L+ V + IA GM Y+ +
Sbjct: 76 YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNY 132
Query: 275 IHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRY 331
+HRDL + NIL ++ KVADFG+++L+ ED T + + ++
Sbjct: 133 VHRDLRAA-----------NILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKW 178
Query: 332 VAPEVFKNEEYDTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAK 390
APE + K DV+SF ++L E+ +G P+ + EV R P P +
Sbjct: 179 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPE 236
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
L +L+ +CW ++P +RPTF + LE S
Sbjct: 237 C-PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 272
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 128/271 (47%), Gaps = 42/271 (15%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ VAVK L ++ D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 67 AVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYAS 124
Query: 234 KGDLRAFL--KRKGALKPST--------------AVRFALDIARGMNYLHENKPVPIIHR 277
KG+LR +L +R ++ S V +ARGM YL K IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHR 181
Query: 278 DLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEV 336
DL RN+L ++ +K+ADFG+++ + + + T +++APE
Sbjct: 182 DLAA-----------RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEA 230
Query: 337 FKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYA 393
+ Y + DV+SF +++ E+ G P+ E+ K R P +LY
Sbjct: 231 LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM 290
Query: 394 RGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++ +CW+ P++RPTF+Q++ L+ I
Sbjct: 291 -----MMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 133/277 (48%), Gaps = 35/277 (12%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 244
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IV EY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 245 YAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNY 301
Query: 275 IHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRY 331
+HRDL + NIL ++ KVADFG+++L+ ED T + + ++
Sbjct: 302 VHRDLRAA-----------NILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKW 347
Query: 332 VAPEVFKNEEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPKAYAARQRPPFKAPAK 390
APE + K DV+SF ++L E+ +G P+ + EV R P P +
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPE 405
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
L +L+ +CW ++P +RPTF + LE S
Sbjct: 406 C-PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 128/271 (47%), Gaps = 42/271 (15%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ VAVK L ++ D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 113 AVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 170
Query: 234 KGDLRAFL--KRKGALKPST--------------AVRFALDIARGMNYLHENKPVPIIHR 277
KG+LR +L +R ++ S V +ARGM YL K IHR
Sbjct: 171 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHR 227
Query: 278 DLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEV 336
DL RN+L ++ +K+ADFG+++ + + + T +++APE
Sbjct: 228 DLAA-----------RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEA 276
Query: 337 FKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYA 393
+ Y + DV+SF +++ E+ G P+ E+ K R P +LY
Sbjct: 277 LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM 336
Query: 394 RGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++ +CW+ P++RPTF+Q++ L+ I
Sbjct: 337 -----MMRDCWHAVPSQRPTFKQLVEDLDRI 362
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 133/277 (48%), Gaps = 35/277 (12%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 78
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IVTEY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 79 YAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 275 IHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRY 331
+HRDL + NIL ++ KVADFG+++L+ ED T + + ++
Sbjct: 136 VHRDLRAA-----------NILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKW 181
Query: 332 VAPEVFKNEEYDTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAK 390
APE + K DV+SF ++L E+ +G P+ + EV R P P +
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPE 239
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
L +L+ +CW + P +RPTF + LE S
Sbjct: 240 C-PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 127/271 (46%), Gaps = 49/271 (18%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLPK 234
++VAVK L +D+ A EL ++ + +H N+V LGA T P++++TEY
Sbjct: 77 LKVAVKMLKSTAHADEKE--ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCY 134
Query: 235 GDLRAFLKRKG---------ALKPST-----AVRFALDIARGMNYLHENKPVPIIHRDLE 280
GDL FL+RK A+ ST + F+ +A+GM +L IHRD+
Sbjct: 135 GDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKN---CIHRDVA 191
Query: 281 PSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVF 337
RN+L + K+ DFG+++ + D + + +++APE
Sbjct: 192 A-----------RNVLLTNGHVAKIGDFGLAR--DIMNDSNYIVKGNARLPVKWMAPESI 238
Query: 338 KNEEYDTKVDVFSFALILQEMIE-GCPPF-----TMKHDNEVPKAYAARQRPPFKAPAKL 391
+ Y + DV+S+ ++L E+ G P+ K V Y Q P F AP +
Sbjct: 239 FDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQ-PAF-APKNI 296
Query: 392 YARGLKELIEECWNEKPAKRPTFRQIITRLE 422
Y+ +++ CW +P RPTF+QI + L+
Sbjct: 297 YS-----IMQACWALEPTHRPTFQQICSFLQ 322
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 125/267 (46%), Gaps = 45/267 (16%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLPK 234
++VAVK L +D+ A EL ++ + +H N+V LGA T P++++TEY
Sbjct: 69 LKVAVKMLKSTAHADEKE--ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCY 126
Query: 235 GDLRAFLKRKGA----------LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
GDL FL+RK L+ + F+ +A+GM +L IHRD+
Sbjct: 127 GDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAA--- 180
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEE 341
RN+L + K+ DFG+++ + D + + +++APE +
Sbjct: 181 --------RNVLLTNGHVAKIGDFGLAR--DIMNDSNYIVKGNARLPVKWMAPESIFDCV 230
Query: 342 YDTKVDVFSFALILQEMIE-GCPPF-----TMKHDNEVPKAYAARQRPPFKAPAKLYARG 395
Y + DV+S+ ++L E+ G P+ K V Y Q P F AP +Y+
Sbjct: 231 YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQ-PAF-APKNIYS-- 286
Query: 396 LKELIEECWNEKPAKRPTFRQIITRLE 422
+++ CW +P RPTF+QI + L+
Sbjct: 287 ---IMQACWALEPTHRPTFQQICSFLQ 310
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 132/277 (47%), Gaps = 35/277 (12%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 191 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPE----AFLQEAQVMKKLRHEKLVQ-L 245
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IVTEY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 246 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNY 302
Query: 275 IHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRY 331
+HRDL + NIL ++ KVADFG+ +L+ ED T + + ++
Sbjct: 303 VHRDLRAA-----------NILVGENLVCKVADFGLGRLI---EDNEYTARQGAKFPIKW 348
Query: 332 VAPEVFKNEEYDTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAK 390
APE + K DV+SF ++L E+ +G P+ + EV R P P +
Sbjct: 349 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPE 406
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
L +L+ +CW + P +RPTF + LE S
Sbjct: 407 C-PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 442
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 130/277 (46%), Gaps = 53/277 (19%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ--SSPMMIVTEYL 232
G QVAVK L E S + + + E+ +L+ + H N+V++ G T+ + + ++ E+L
Sbjct: 50 GEQVAVKSLKPE--SGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 107
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
P G L+ +L K K + +++A+ I +GM+YL + +HRDL
Sbjct: 108 PSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAA---------- 154
Query: 292 DRNILRDDSGNLKVADFGVSKLL-------TVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
RN+L + +K+ DFG++K + TVK+DR D+ + APE ++
Sbjct: 155 -RNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDR-----DSPVFWYAPECLMQSKFYI 208
Query: 345 KVDVFSFALILQEMIEGC----PPFT------------MKHDNEVPKAYAARQRP-PFKA 387
DV+SF + L E++ C P M V ++ P P
Sbjct: 209 ASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNC 268
Query: 388 PAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
P ++Y +L+ +CW +P+ R +F+ +I E++
Sbjct: 269 PDEVY-----QLMRKCWEFQPSNRTSFQNLIEGFEAL 300
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 125/267 (46%), Gaps = 45/267 (16%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLPK 234
++VAVK L +D+ A EL ++ + +H N+V LGA T P++++TEY
Sbjct: 77 LKVAVKMLKSTAHADEKE--ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCY 134
Query: 235 GDLRAFLKRKGA----------LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
GDL FL+RK L+ + F+ +A+GM +L IHRD+
Sbjct: 135 GDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAA--- 188
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEE 341
RN+L + K+ DFG+++ + D + + +++APE +
Sbjct: 189 --------RNVLLTNGHVAKIGDFGLAR--DIMNDSNYIVKGNARLPVKWMAPESIFDCV 238
Query: 342 YDTKVDVFSFALILQEMIE-GCPPF-----TMKHDNEVPKAYAARQRPPFKAPAKLYARG 395
Y + DV+S+ ++L E+ G P+ K V Y Q P F AP +Y+
Sbjct: 239 YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQ-PAF-APKNIYS-- 294
Query: 396 LKELIEECWNEKPAKRPTFRQIITRLE 422
+++ CW +P RPTF+QI + L+
Sbjct: 295 ---IMQACWALEPTHRPTFQQICSFLQ 318
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 130/277 (46%), Gaps = 53/277 (19%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ--SSPMMIVTEYL 232
G QVAVK L E S + + + E+ +L+ + H N+V++ G T+ + + ++ E+L
Sbjct: 38 GEQVAVKSLKPE--SGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 95
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
P G L+ +L K K + +++A+ I +GM+YL + +HRDL
Sbjct: 96 PSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAA---------- 142
Query: 292 DRNILRDDSGNLKVADFGVSKLL-------TVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
RN+L + +K+ DFG++K + TVK+DR D+ + APE ++
Sbjct: 143 -RNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDR-----DSPVFWYAPECLMQSKFYI 196
Query: 345 KVDVFSFALILQEMIEGC----PPFT------------MKHDNEVPKAYAARQRP-PFKA 387
DV+SF + L E++ C P M V ++ P P
Sbjct: 197 ASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNC 256
Query: 388 PAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
P ++Y +L+ +CW +P+ R +F+ +I E++
Sbjct: 257 PDEVY-----QLMRKCWEFQPSNRTSFQNLIEGFEAL 288
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 128/271 (47%), Gaps = 42/271 (15%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ VAVK L ++ D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 67 AVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 234 KGDLRAFL--KRKGALKPST--------------AVRFALDIARGMNYLHENKPVPIIHR 277
KG+LR +L +R ++ S V +ARGM YL K IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHR 181
Query: 278 DLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEV 336
DL RN+L ++ +++ADFG+++ + + + T +++APE
Sbjct: 182 DLAA-----------RNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEA 230
Query: 337 FKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYA 393
+ Y + DV+SF +++ E+ G P+ E+ K R P +LY
Sbjct: 231 LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM 290
Query: 394 RGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++ +CW+ P++RPTF+Q++ L+ I
Sbjct: 291 -----MMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 57/279 (20%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VAVK L E + +R E +L+++ HP+V++ GA +Q P++++ EY G L
Sbjct: 56 VAVKMLKEN--ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 238 RAFLKRKGALKPST------------------------AVRFALDIARGMNYLHENKPVP 273
R FL+ + P + FA I++GM YL E K
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--- 170
Query: 274 IIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD-TSCRYV 332
++HRDL RNIL + +K++DFG+S+ + ++ Q +++
Sbjct: 171 LVHRDLAA-----------RNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWM 219
Query: 333 APEVFKNEEYDTKVDVFSFALILQEMIE-------GCPPFTMKHDNEVPKAYAARQRPPF 385
A E + Y T+ DV+SF ++L E++ G PP + + + R P
Sbjct: 220 AIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKT----GHRMERPD 275
Query: 386 KAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++Y L+ +CW ++P KRP F I LE +
Sbjct: 276 NCSEEMY-----RLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 128/274 (46%), Gaps = 29/274 (10%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 78
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IV EY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 79 YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 275 IHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAP 334
+HRDL + NIL ++ KVADFG+++L+ E ++ AP
Sbjct: 136 VHRDLRAA-----------NILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAP 184
Query: 335 EVFKNEEYDTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYA 393
E + K DV+SF ++L E+ +G P+ + EV R P P +
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPEC-P 241
Query: 394 RGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
L +L+ +CW + P +RPTF + LE S
Sbjct: 242 ESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 57/279 (20%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VAVK L E + +R E +L+++ HP+V++ GA +Q P++++ EY G L
Sbjct: 56 VAVKMLKEN--ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 238 RAFLKRKGALKPST------------------------AVRFALDIARGMNYLHENKPVP 273
R FL+ + P + FA I++GM YL E K
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--- 170
Query: 274 IIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD-TSCRYV 332
++HRDL RNIL + +K++DFG+S+ + ++ Q +++
Sbjct: 171 LVHRDLAA-----------RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWM 219
Query: 333 APEVFKNEEYDTKVDVFSFALILQEMIE-------GCPPFTMKHDNEVPKAYAARQRPPF 385
A E + Y T+ DV+SF ++L E++ G PP + + + R P
Sbjct: 220 AIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKT----GHRMERPD 275
Query: 386 KAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++Y L+ +CW ++P KRP F I LE +
Sbjct: 276 NCSEEMY-----RLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 132/277 (47%), Gaps = 35/277 (12%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 78
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IV EY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 79 YAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 275 IHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRY 331
+HRDL + NIL ++ KVADFG+++L+ ED T + + ++
Sbjct: 136 VHRDLRAA-----------NILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKW 181
Query: 332 VAPEVFKNEEYDTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAK 390
APE + K DV+SF ++L E+ +G P+ + EV R P P +
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPE 239
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
L +L+ +CW + P +RPTF + LE S
Sbjct: 240 C-PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G +VAVK L + I D V + E+ L+ RHP++++ ++ + +V EY+
Sbjct: 36 GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G+L ++ + G ++ A R I ++Y H + ++HRDL+P N
Sbjct: 96 GELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPE-----------N 141
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY-DTKVDVFSFAL 353
+L D N K+ADFG+S +++ E +C S Y APEV Y +VD++S +
Sbjct: 142 VLLDAHMNAKIADFGLSNMMSDGEFLRTSC--GSPNYAAPEVISGRLYAGPEVDIWSCGV 199
Query: 354 ILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPT 413
IL ++ G PF D VP + + F P L R + L+ P KR T
Sbjct: 200 ILYALLCGTLPFD---DEHVPTLFKKIRGGVFYIPEYL-NRSVATLLMHMLQVDPLKRAT 255
Query: 414 FRQI 417
+ I
Sbjct: 256 IKDI 259
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 132/277 (47%), Gaps = 35/277 (12%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 78
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IV EY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 79 YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 275 IHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRY 331
+HRDL + NIL ++ KVADFG+++L+ ED T + + ++
Sbjct: 136 VHRDLRAA-----------NILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKW 181
Query: 332 VAPEVFKNEEYDTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAK 390
APE + K DV+SF ++L E+ +G P+ + EV R P P +
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPE 239
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
L +L+ +CW + P +RPTF + LE S
Sbjct: 240 C-PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 126/280 (45%), Gaps = 58/280 (20%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLPK 234
++VAVK L +D+ A EL ++ + +H N+V LGA T P++++TEY
Sbjct: 62 LKVAVKMLKSTAHADEKE--ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCY 119
Query: 235 GDLRAFLKRK--GALKPSTA---------------------VRFALDIARGMNYLHENKP 271
GDL FL+RK L PS A + F+ +A+GM +L
Sbjct: 120 GDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN- 178
Query: 272 VPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS--- 328
IHRD+ RN+L + K+ DFG+++ + D + +
Sbjct: 179 --CIHRDVAA-----------RNVLLTNGHVAKIGDFGLAR--DIMNDSNYIVKGNARLP 223
Query: 329 CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPF-----TMKHDNEVPKAYAARQR 382
+++APE + Y + DV+S+ ++L E+ G P+ K V Y Q
Sbjct: 224 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQ- 282
Query: 383 PPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLE 422
P AP +Y+ +++ CW +P RPTF+QI + L+
Sbjct: 283 -PAFAPKNIYS-----IMQACWALEPTHRPTFQQICSFLQ 316
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 127/254 (50%), Gaps = 35/254 (13%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+VAVK + +S V AF E +++ ++H +V+ L AV P+ I+TE++ KG
Sbjct: 214 KVAVKTMKPGSMS----VEAFLAEANVMKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGS 268
Query: 237 LRAFLKR-KGALKP-STAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L FLK +G+ +P + F+ IA GM ++ + IHRDL + N
Sbjct: 269 LLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAA-----------N 314
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFSF 351
IL S K+ADFG+++++ ED T ++ + ++ APE + K DV+SF
Sbjct: 315 ILVSASLVCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSF 371
Query: 352 ALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKP 408
++L E++ G P+ + EV +A R P P +LY ++ CW +P
Sbjct: 372 GILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELY-----NIMMRCWKNRP 426
Query: 409 AKRPTFRQIITRLE 422
+RPTF I + L+
Sbjct: 427 EERPTFEYIQSVLD 440
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 116/257 (45%), Gaps = 35/257 (13%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 36 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 87
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
+ ++ EY P+G++ L++ + ++A ++Y H + +IHRD++P
Sbjct: 88 VYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE-- 142
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR---YVAPEVFKNEE 341
N+L +G LK+ADFG S P + + T C Y+ PE+ +
Sbjct: 143 ---------NLLLGSAGELKIADFGWSV------HAPSSRRTTLCGTLDYLPPEMIEGRM 187
Query: 342 YDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 401
+D KVD++S ++ E + G PPF N + Y R F P G ++LI
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLIS 243
Query: 402 ECWNEKPAKRPTFRQII 418
P++RP R+++
Sbjct: 244 RLLKHNPSQRPMLREVL 260
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 124/279 (44%), Gaps = 57/279 (20%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VAVK L E + +R E +L+++ HP+V++ GA +Q P++++ EY G L
Sbjct: 56 VAVKMLKEN--ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 238 RAFLKRKGALKPST------------------------AVRFALDIARGMNYLHENKPVP 273
R FL+ + P + FA I++GM YL E +
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MS 170
Query: 274 IIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD-TSCRYV 332
++HRDL RNIL + +K++DFG+S+ + ++ Q +++
Sbjct: 171 LVHRDLAA-----------RNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWM 219
Query: 333 APEVFKNEEYDTKVDVFSFALILQEMIE-------GCPPFTMKHDNEVPKAYAARQRPPF 385
A E + Y T+ DV+SF ++L E++ G PP + + + R P
Sbjct: 220 AIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKT----GHRMERPD 275
Query: 386 KAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++Y L+ +CW ++P KRP F I LE +
Sbjct: 276 NCSEEMY-----RLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 115/257 (44%), Gaps = 35/257 (13%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 32 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 83
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P
Sbjct: 84 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE-- 138
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR---YVAPEVFKNEE 341
N+L +G LK+ADFG S P + +DT C Y+ PE+ +
Sbjct: 139 ---------NLLLGSAGELKIADFGWSV------HAPSSRRDTLCGTLDYLPPEMIEGRM 183
Query: 342 YDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 401
+D KVD++S ++ E + G PPF N + Y R F P G ++LI
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLIS 239
Query: 402 ECWNEKPAKRPTFRQII 418
P++RP R+++
Sbjct: 240 RLLKHNPSQRPMLREVL 256
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 127/271 (46%), Gaps = 42/271 (15%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ VAVK L ++ D + E+ +++ I +H N++ LGA TQ P+ ++ Y
Sbjct: 67 AVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYAS 124
Query: 234 KGDLRAFL--KRKGALKPST--------------AVRFALDIARGMNYLHENKPVPIIHR 277
KG+LR +L +R ++ S V +ARGM YL K IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHR 181
Query: 278 DLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEV 336
DL RN+L ++ +K+ADFG+++ + + + T +++APE
Sbjct: 182 DLAA-----------RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEA 230
Query: 337 FKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYA 393
+ Y + DV+SF +++ E+ G P+ E+ K R P +LY
Sbjct: 231 LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM 290
Query: 394 RGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++ +CW+ P++RPTF+Q++ L+ I
Sbjct: 291 -----MMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 127/254 (50%), Gaps = 35/254 (13%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+VAVK + +S V AF E +++ ++H +V+ L AV P+ I+TE++ KG
Sbjct: 41 KVAVKTMKPGSMS----VEAFLAEANVMKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGS 95
Query: 237 LRAFLKR-KGALKP-STAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L FLK +G+ +P + F+ IA GM ++ + IHRDL + N
Sbjct: 96 LLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAA-----------N 141
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFSF 351
IL S K+ADFG+++++ ED T ++ + ++ APE + K DV+SF
Sbjct: 142 ILVSASLVCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSF 198
Query: 352 ALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKP 408
++L E++ G P+ + EV +A R P P +LY ++ CW +P
Sbjct: 199 GILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELY-----NIMMRCWKNRP 253
Query: 409 AKRPTFRQIITRLE 422
+RPTF I + L+
Sbjct: 254 EERPTFEYIQSVLD 267
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 127/271 (46%), Gaps = 42/271 (15%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ VAVK L ++ D + E+ +++ I +H N++ LGA TQ P+ ++ Y
Sbjct: 67 AVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYAS 124
Query: 234 KGDLRAFL--KRKGALKPST--------------AVRFALDIARGMNYLHENKPVPIIHR 277
KG+LR +L +R ++ S V +ARGM YL K IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHR 181
Query: 278 DLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEV 336
DL RN+L ++ +K+ADFG+++ + + + T +++APE
Sbjct: 182 DLAA-----------RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEA 230
Query: 337 FKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYA 393
+ Y + DV+SF +++ E+ G P+ E+ K R P +LY
Sbjct: 231 LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM 290
Query: 394 RGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++ +CW+ P++RPTF+Q++ L+ I
Sbjct: 291 -----MMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 132/277 (47%), Gaps = 35/277 (12%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 78
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IV EY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 79 YAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 275 IHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRY 331
+HRDL + NIL ++ KVADFG+++L+ ED T + + ++
Sbjct: 136 VHRDLRAA-----------NILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKW 181
Query: 332 VAPEVFKNEEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPKAYAARQRPPFKAPAK 390
APE + K DV+SF ++L E+ +G P+ + EV R P P +
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPE 239
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
L +L+ +CW + P +RPTF + LE S
Sbjct: 240 C-PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G +VAVK L + I D V + E+ L+ RHP++++ ++ + +V EY+
Sbjct: 36 GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G+L ++ + G ++ A R I ++Y H + ++HRDL+P N
Sbjct: 96 GELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPE-----------N 141
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY-DTKVDVFSFAL 353
+L D N K+ADFG+S +++ E +C S Y APEV Y +VD++S +
Sbjct: 142 VLLDAHMNAKIADFGLSNMMSDGEFLRDSC--GSPNYAAPEVISGRLYAGPEVDIWSCGV 199
Query: 354 ILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPT 413
IL ++ G PF D VP + + F P L R + L+ P KR T
Sbjct: 200 ILYALLCGTLPFD---DEHVPTLFKKIRGGVFYIPEYL-NRSVATLLMHMLQVDPLKRAT 255
Query: 414 FRQI 417
+ I
Sbjct: 256 IKDI 259
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 124/267 (46%), Gaps = 26/267 (9%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ +G + I VAVK ++ D+ F E +++ + HP++V+ +G + +
Sbjct: 27 EVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE--KFMSEAVIMKNLDHPHIVKLIG-IIE 83
Query: 222 SSPMMIVTEYLPKGDLRAFLKR-KGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
P I+ E P G+L +L+R K +LK T V ++L I + M YL + + +HRD+
Sbjct: 84 EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL---ESINCVHRDIA 140
Query: 281 PSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNE 340
RNIL +K+ DFG+S+ + ++ + ++++PE
Sbjct: 141 V-----------RNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 189
Query: 341 EYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAARQR--PPFKAPAKLYARGLK 397
+ T DV+ FA+ + E++ G PF + +V R P P LY
Sbjct: 190 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYT---- 245
Query: 398 ELIEECWNEKPAKRPTFRQIITRLESI 424
L+ CW+ P+ RP F +++ L +
Sbjct: 246 -LMTRCWDYDPSDRPRFTELVCSLSDV 271
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 26/267 (9%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ +G + I VAVK ++ D+ F E +++ + HP++V+ +G + +
Sbjct: 39 EVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE--KFMSEAVIMKNLDHPHIVKLIG-IIE 95
Query: 222 SSPMMIVTEYLPKGDLRAFLKR-KGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
P I+ E P G+L +L+R K +LK T V ++L I + M YL + +HRD+
Sbjct: 96 EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES---INCVHRDIA 152
Query: 281 PSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNE 340
RNIL +K+ DFG+S+ + ++ + ++++PE
Sbjct: 153 V-----------RNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 201
Query: 341 EYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAARQR--PPFKAPAKLYARGLK 397
+ T DV+ FA+ + E++ G PF + +V R P P LY
Sbjct: 202 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYT---- 257
Query: 398 ELIEECWNEKPAKRPTFRQIITRLESI 424
L+ CW+ P+ RP F +++ L +
Sbjct: 258 -LMTRCWDYDPSDRPRFTELVCSLSDV 283
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 124/267 (46%), Gaps = 26/267 (9%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ +G + I VAVK ++ D+ F E +++ + HP++V+ +G + +
Sbjct: 23 EVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE--KFMSEAVIMKNLDHPHIVKLIG-IIE 79
Query: 222 SSPMMIVTEYLPKGDLRAFLKR-KGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
P I+ E P G+L +L+R K +LK T V ++L I + M YL + + +HRD+
Sbjct: 80 EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL---ESINCVHRDIA 136
Query: 281 PSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNE 340
RNIL +K+ DFG+S+ + ++ + ++++PE
Sbjct: 137 V-----------RNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 185
Query: 341 EYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAARQR--PPFKAPAKLYARGLK 397
+ T DV+ FA+ + E++ G PF + +V R P P LY
Sbjct: 186 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYT---- 241
Query: 398 ELIEECWNEKPAKRPTFRQIITRLESI 424
L+ CW+ P+ RP F +++ L +
Sbjct: 242 -LMTRCWDYDPSDRPRFTELVCSLSDV 267
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 111/251 (44%), Gaps = 29/251 (11%)
Query: 168 FILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
FILA + ++K G E R E+ + +RHPN+++ G S+ + +
Sbjct: 34 FILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDSTRVYL 85
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVA 287
+ EY P G + L++ + ++A ++Y H K +IHRD++P
Sbjct: 86 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKK---VIHRDIKPE----- 137
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVD 347
N+L +G LK+ADFG S + R C + Y+ PE+ + +D KVD
Sbjct: 138 ------NLLLGSAGELKIADFGWS-VHAPSSRRAALC--GTLDYLPPEMIEGRMHDEKVD 188
Query: 348 VFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEK 407
++S ++ E + G PPF N Y R F P G ++LI
Sbjct: 189 LWSLGVLCYEFLVGKPPFEA---NTYQDTYKRISRVEFTFP-DFVTEGARDLISRLLKHN 244
Query: 408 PAKRPTFRQII 418
P++RP R+++
Sbjct: 245 PSQRPMLREVL 255
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 114/254 (44%), Gaps = 29/254 (11%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 36 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 87
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
+ ++ EY P+G++ L++ + ++A ++Y H + +IHRD++P
Sbjct: 88 VYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE-- 142
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
N+L +G LK+ADFG S + R T Y+ PE+ + +D
Sbjct: 143 ---------NLLLGSAGELKIADFGWS--VHAPSSRRXXLXGT-LDYLPPEMIEGRMHDE 190
Query: 345 KVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECW 404
KVD++S ++ E + G PPF N + Y R F P G ++LI
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLL 246
Query: 405 NEKPAKRPTFRQII 418
P++RP R+++
Sbjct: 247 KHNPSQRPMLREVL 260
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 128/272 (47%), Gaps = 44/272 (16%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVK+L S D+ R F+ E+ +L+ + +V++ G + +V EYL
Sbjct: 39 GALVAVKQLQH---SGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 95
Query: 233 PKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
P G LR FL+R A L S + ++ I +GM YL + +HRDL
Sbjct: 96 PSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAA---------- 142
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVF 349
RNIL + ++K+ADFG++KLL + +D + + + + APE + + + DV+
Sbjct: 143 -RNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVW 201
Query: 350 SFALILQEMI----EGCPPFT-----MKHDNEVPK--------AYAARQRPPFKAPAKLY 392
SF ++L E+ + C P M + +VP R P PA+++
Sbjct: 202 SFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSRLLELLEEGQRLPAPPACPAEVH 261
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
EL++ CW P RP+F + +L+ +
Sbjct: 262 -----ELMKLCWAPSPQDRPSFSALGPQLDML 288
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 124/273 (45%), Gaps = 51/273 (18%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLPK 234
++VAVK L +D+ A EL ++ + +H N+V LGA T P++++TEY
Sbjct: 77 LKVAVKMLKSTAHADEKE--ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCY 134
Query: 235 GDLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRD 278
GDL FL+RK L + F+ +A+GM +L IHRD
Sbjct: 135 GDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKN---CIHRD 191
Query: 279 LEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPE 335
+ RN+L + K+ DFG+++ + D + + +++APE
Sbjct: 192 VAA-----------RNVLLTNGHVAKIGDFGLAR--DIMNDSNYIVKGNARLPVKWMAPE 238
Query: 336 VFKNEEYDTKVDVFSFALILQEMIE-GCPPF-----TMKHDNEVPKAYAARQRPPFKAPA 389
+ Y + DV+S+ ++L E+ G P+ K V Y Q P F AP
Sbjct: 239 SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQ-PAF-APK 296
Query: 390 KLYARGLKELIEECWNEKPAKRPTFRQIITRLE 422
+Y+ +++ CW +P RPTF+QI + L+
Sbjct: 297 NIYS-----IMQACWALEPTHRPTFQQICSFLQ 324
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 106/229 (46%), Gaps = 26/229 (11%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
EL +L + P +V F GA + I E++ G L LK+ G + + ++ +
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+G+ YL E I+HRD++PS NIL + G +K+ DFGVS L D
Sbjct: 114 IKGLTYLREKH--KIMHRDVKPS-----------NILVNSRGEIKLCDFGVSGQLI---D 157
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEG---CPPFTMKHDNEVPKA 376
+ Y++PE + Y + D++S L L EM G PP K D+ P A
Sbjct: 158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMA 217
Query: 377 ------YAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIIT 419
Y + PP K P+ +++ ++ + +C + PA+R +Q++
Sbjct: 218 IFELLDYIVNEPPP-KLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 265
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 130/272 (47%), Gaps = 44/272 (16%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLG-AVTQSSP-MMIVTEYL 232
G VAVK+L S D+ R F+ E+ +L+ + +V++ G + P + +V EYL
Sbjct: 36 GALVAVKQLQH---SGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYL 92
Query: 233 PKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
P G LR FL+R A L S + ++ I +GM YL + +HRDL
Sbjct: 93 PSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAA---------- 139
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVF 349
RNIL + ++K+ADFG++KLL + +D + + + + APE + + + DV+
Sbjct: 140 -RNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVW 198
Query: 350 SFALILQEMI----EGCPPFT-----MKHDNEVPK--------AYAARQRPPFKAPAKLY 392
SF ++L E+ + C P M + +VP R P PA+++
Sbjct: 199 SFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVH 258
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
EL++ CW P RP+F + +L+ +
Sbjct: 259 -----ELMKLCWAPSPQDRPSFSALGPQLDML 285
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 128/272 (47%), Gaps = 44/272 (16%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVK+L S D+ R F+ E+ +L+ + +V++ G + +V EYL
Sbjct: 52 GALVAVKQLQH---SGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 108
Query: 233 PKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
P G LR FL+R A L S + ++ I +GM YL + +HRDL
Sbjct: 109 PSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAA---------- 155
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVF 349
RNIL + ++K+ADFG++KLL + +D + + + + APE + + + DV+
Sbjct: 156 -RNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVW 214
Query: 350 SFALILQEMI----EGCPPFT-----MKHDNEVPK--------AYAARQRPPFKAPAKLY 392
SF ++L E+ + C P M + +VP R P PA+++
Sbjct: 215 SFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVH 274
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
EL++ CW P RP+F + +L+ +
Sbjct: 275 -----ELMKLCWAPSPQDRPSFSALGPQLDML 301
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 114/257 (44%), Gaps = 35/257 (13%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 34 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 85
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P
Sbjct: 86 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE-- 140
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR---YVAPEVFKNEE 341
N+L +G LK+ADFG S P + + T C Y+ PE+ +
Sbjct: 141 ---------NLLLGSAGELKIADFGWSV------HAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 342 YDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 401
+D KVD++S ++ E + G PPF N + Y R F P G ++LI
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLIS 241
Query: 402 ECWNEKPAKRPTFRQII 418
P++RP R+++
Sbjct: 242 RLLKHNPSQRPMLREVL 258
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 128/272 (47%), Gaps = 44/272 (16%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVK+L S D+ R F+ E+ +L+ + +V++ G + +V EYL
Sbjct: 40 GALVAVKQLQH---SGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 96
Query: 233 PKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
P G LR FL+R A L S + ++ I +GM YL + +HRDL
Sbjct: 97 PSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAA---------- 143
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVF 349
RNIL + ++K+ADFG++KLL + +D + + + + APE + + + DV+
Sbjct: 144 -RNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVW 202
Query: 350 SFALILQEMI----EGCPPFT-----MKHDNEVPK--------AYAARQRPPFKAPAKLY 392
SF ++L E+ + C P M + +VP R P PA+++
Sbjct: 203 SFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVH 262
Query: 393 ARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
EL++ CW P RP+F + +L+ +
Sbjct: 263 -----ELMKLCWAPSPQDRPSFSALGPQLDML 289
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 29/254 (11%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 32 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 83
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P
Sbjct: 84 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE-- 138
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
N+L +G LK+ADFG S R T T Y+ PE+ + +D
Sbjct: 139 ---------NLLLGSAGELKIADFGWS--CHAPSSRRTTLSGT-LDYLPPEMIEGRMHDE 186
Query: 345 KVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECW 404
KVD++S ++ E + G PPF N + Y R F P G ++LI
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLL 242
Query: 405 NEKPAKRPTFRQII 418
P++RP R+++
Sbjct: 243 KHNPSQRPMLREVL 256
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 114/257 (44%), Gaps = 35/257 (13%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 34 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 85
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P
Sbjct: 86 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE-- 140
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR---YVAPEVFKNEE 341
N+L +G LK+ADFG S P + + T C Y+ PE+ +
Sbjct: 141 ---------NLLLGSAGELKIADFGWSV------HAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 342 YDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 401
+D KVD++S ++ E + G PPF N + Y R F P G ++LI
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLIS 241
Query: 402 ECWNEKPAKRPTFRQII 418
P++RP R+++
Sbjct: 242 RLLKHNPSQRPMLREVL 258
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 114/257 (44%), Gaps = 35/257 (13%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 30 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 81
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P
Sbjct: 82 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE-- 136
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR---YVAPEVFKNEE 341
N+L +G LK+ADFG S P + + T C Y+ PE+ +
Sbjct: 137 ---------NLLLGSAGELKIADFGWSV------HAPSSRRTTLCGTLDYLPPEMIEGRM 181
Query: 342 YDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 401
+D KVD++S ++ E + G PPF N + Y R F P G ++LI
Sbjct: 182 HDEKVDLWSLGVLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLIS 237
Query: 402 ECWNEKPAKRPTFRQII 418
P++RP R+++
Sbjct: 238 RLLKHNPSQRPMLREVL 254
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 113/254 (44%), Gaps = 35/254 (13%)
Query: 168 FILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
FILA + ++K G E R E+ + +RHPN+++ G ++ + +
Sbjct: 31 FILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 82
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVA 287
+ EY P G + L++ + ++A ++Y H + +IHRD++P
Sbjct: 83 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE----- 134
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR---YVAPEVFKNEEYDT 344
N+L +G LK+ADFG S P + + T C Y+ PE+ + +D
Sbjct: 135 ------NLLLGSAGELKIADFGWSV------HAPSSRRTTLCGTLDYLPPEMIEGRMHDE 182
Query: 345 KVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECW 404
KVD++S ++ E + G PPF N + Y R F P G ++LI
Sbjct: 183 KVDLWSLGVLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLL 238
Query: 405 NEKPAKRPTFRQII 418
P++RP R+++
Sbjct: 239 KHNPSQRPMLREVL 252
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 29/254 (11%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 48 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 99
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P
Sbjct: 100 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE-- 154
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
N+L +G LK+ADFG S + R C + Y+ PE+ + +D
Sbjct: 155 ---------NLLLGSAGELKIADFGWS-VHAPSSRRTTLC--GTLDYLPPEMIEGRMHDE 202
Query: 345 KVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECW 404
KVD++S ++ E + G PPF N + Y R F P G ++LI
Sbjct: 203 KVDLWSLGVLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLL 258
Query: 405 NEKPAKRPTFRQII 418
P++RP R+++
Sbjct: 259 KHNPSQRPMLREVL 272
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 114/257 (44%), Gaps = 35/257 (13%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 34 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 85
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P
Sbjct: 86 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE-- 140
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR---YVAPEVFKNEE 341
N+L +G LK+ADFG S P + +D C Y+ PE+ +
Sbjct: 141 ---------NLLLGSAGELKIADFGWSV------HAPSSRRDDLCGTLDYLPPEMIEGRM 185
Query: 342 YDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 401
+D KVD++S ++ E + G PPF N + Y R F P G ++LI
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLIS 241
Query: 402 ECWNEKPAKRPTFRQII 418
P++RP R+++
Sbjct: 242 RLLKHNPSQRPMLREVL 258
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 114/257 (44%), Gaps = 35/257 (13%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 36 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 87
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P
Sbjct: 88 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE-- 142
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR---YVAPEVFKNEE 341
N+L +G LK+ADFG S P + + T C Y+ PE+ +
Sbjct: 143 ---------NLLLGSAGELKIADFGWSV------HAPSSRRTTLCGTLDYLPPEMIEGRM 187
Query: 342 YDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 401
+D KVD++S ++ E + G PPF N + Y R F P G ++LI
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLIS 243
Query: 402 ECWNEKPAKRPTFRQII 418
P++RP R+++
Sbjct: 244 RLLKHNPSQRPMLREVL 260
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 114/257 (44%), Gaps = 35/257 (13%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 35 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 86
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P
Sbjct: 87 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE-- 141
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR---YVAPEVFKNEE 341
N+L +G LK+ADFG S P + + T C Y+ PE+ +
Sbjct: 142 ---------NLLLGSAGELKIADFGWSV------HAPSSRRTTLCGTLDYLPPEMIEGRM 186
Query: 342 YDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 401
+D KVD++S ++ E + G PPF N + Y R F P G ++LI
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLIS 242
Query: 402 ECWNEKPAKRPTFRQII 418
P++RP R+++
Sbjct: 243 RLLKHNPSQRPMLREVL 259
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 120/257 (46%), Gaps = 34/257 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L +E++ +V DE +L + HP +++ G + + ++ +Y+
Sbjct: 31 GRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEG 90
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G+L + L++ A +A ++ + YLH II+RDL+P N
Sbjct: 91 GELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPE-----------N 136
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
IL D +G++K+ DFG +K V + C + Y+APEV + Y+ +D +SF ++
Sbjct: 137 ILLDKNGHIKITDFGFAKY--VPDVTYXLC--GTPDYIAPEVVSTKPYNKSIDWWSFGIL 192
Query: 355 LQEMIEGCPPFTMKHDNEVPKAY-----AARQRPPF------KAPAKLYARGLKELIEEC 403
+ EM+ G PF +D+ K Y A + PPF ++L R L + +
Sbjct: 193 IYEMLAGYTPF---YDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNL 249
Query: 404 WN--EKPAKRPTFRQII 418
N E P F++++
Sbjct: 250 QNGTEDVKNHPWFKEVV 266
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 29/254 (11%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 31 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 82
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P
Sbjct: 83 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE-- 137
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
N+L +G LK+ADFG S + R C + Y+ PE+ + +D
Sbjct: 138 ---------NLLLGSAGELKIADFGWS-VHAPSSRRTXLC--GTLDYLPPEMIEGRMHDE 185
Query: 345 KVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECW 404
KVD++S ++ E + G PPF N + Y R F P G ++LI
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLL 241
Query: 405 NEKPAKRPTFRQII 418
P++RP R+++
Sbjct: 242 KHNPSQRPMLREVL 255
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 113/257 (43%), Gaps = 35/257 (13%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 36 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 87
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P
Sbjct: 88 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE-- 142
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR---YVAPEVFKNEE 341
N+L +G LK+ADFG S P + + T C Y+ PE +
Sbjct: 143 ---------NLLLGSAGELKIADFGWSV------HAPSSRRTTLCGTLDYLPPEXIEGRX 187
Query: 342 YDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 401
+D KVD++S ++ E + G PPF N + Y R F P G ++LI
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLIS 243
Query: 402 ECWNEKPAKRPTFRQII 418
P++RP R+++
Sbjct: 244 RLLKHNPSQRPXLREVL 260
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 32/288 (11%)
Query: 147 EYEIDPHELDFTNSV------EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDE 200
+YEI ++ + ++ +G ++ + VA+K + SD R + ++
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTC-KNCTSDSVREKFLQEA 62
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
L + Q HP++V+ +G +T++ P+ I+ E G+LR+FL+ RK +L ++ + +A +
Sbjct: 63 LTMRQ-FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQL 120
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+ + YL + +HRD+ RN+L + +K+ DFG+S+ +
Sbjct: 121 STALAYLESKR---FVHRDIAA-----------RNVLVSSNDCVKLGDFGLSRYMEDSTX 166
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQE-MIEGCPPFTMKHDNEVPKAYA 378
+ +++APE + + DV+ F + + E ++ G PF +N+V
Sbjct: 167 XKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 226
Query: 379 ARQRPPF--KAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+R P P LY+ L+ +CW P++RP F ++ +L +I
Sbjct: 227 NGERLPMPPNCPPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 29/254 (11%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 34 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 85
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P
Sbjct: 86 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE-- 140
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
N+L +G LK+ADFG S + R C + Y+ PE+ + +D
Sbjct: 141 ---------NLLLGSAGELKIADFGWS-VHAPSSRRXXLC--GTLDYLPPEMIEGRMHDE 188
Query: 345 KVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECW 404
KVD++S ++ E + G PPF N + Y R F P G ++LI
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLL 244
Query: 405 NEKPAKRPTFRQII 418
P++RP R+++
Sbjct: 245 KHNPSQRPMLREVL 258
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 29/254 (11%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 34 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 85
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P
Sbjct: 86 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE-- 140
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
N+L +G LK+ADFG S + R C + Y+ PE+ + +D
Sbjct: 141 ---------NLLLGSAGELKIADFGWS-VHAPSSRRAALC--GTLDYLPPEMIEGRMHDE 188
Query: 345 KVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECW 404
KVD++S ++ E + G PPF N + Y R F P G ++LI
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLL 244
Query: 405 NEKPAKRPTFRQII 418
P++RP R+++
Sbjct: 245 KHNPSQRPMLREVL 258
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 29/254 (11%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 31 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 82
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P
Sbjct: 83 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE-- 137
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
N+L +G LK+ADFG S + R C + Y+ PE+ + +D
Sbjct: 138 ---------NLLLGSAGELKIADFGWS-VHAPSSRRXXLC--GTLDYLPPEMIEGRMHDE 185
Query: 345 KVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECW 404
KVD++S ++ E + G PPF N + Y R F P G ++LI
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLL 241
Query: 405 NEKPAKRPTFRQII 418
P++RP R+++
Sbjct: 242 KHNPSQRPMLREVL 255
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 29/254 (11%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 33 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 84
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P
Sbjct: 85 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE-- 139
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
N+L +G LK+ADFG S + R C + Y+ PE+ + +D
Sbjct: 140 ---------NLLLGSAGELKIADFGWS-VHAPSSRRXXLC--GTLDYLPPEMIEGRMHDE 187
Query: 345 KVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECW 404
KVD++S ++ E + G PPF N + Y R F P G ++LI
Sbjct: 188 KVDLWSLGVLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLL 243
Query: 405 NEKPAKRPTFRQII 418
P++RP R+++
Sbjct: 244 KHNPSQRPMLREVL 257
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 129/278 (46%), Gaps = 47/278 (16%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 57 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 113
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
P G LR +L K K + +++ I +GM YL + IHRDL
Sbjct: 114 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLAT---------- 160
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVF 349
RNIL ++ +K+ DFG++K+L ++ + ++ + APE ++ DV+
Sbjct: 161 -RNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 219
Query: 350 SFALILQEMI-----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAK 390
SF ++L E+ PP + H E+ K RP P +
Sbjct: 220 SFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDE 278
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 428
+Y ++ ECWN +RP+FR + R++ I +++
Sbjct: 279 IYM-----IMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 129/278 (46%), Gaps = 47/278 (16%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 39 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
P G LR +L K K + +++ I +GM YL + IHRDL
Sbjct: 96 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLAT---------- 142
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVF 349
RNIL ++ +K+ DFG++K+L ++ + ++ + APE ++ DV+
Sbjct: 143 -RNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 201
Query: 350 SFALILQEMI-----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAK 390
SF ++L E+ PP + H E+ K RP P +
Sbjct: 202 SFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDE 260
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 428
+Y ++ ECWN +RP+FR + R++ I +++
Sbjct: 261 IYM-----IMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 114/257 (44%), Gaps = 35/257 (13%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 31 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 82
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P
Sbjct: 83 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE-- 137
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR---YVAPEVFKNEE 341
N+L +G LK+ADFG S P + + T C Y+ PE+ +
Sbjct: 138 ---------NLLLGSAGELKIADFGWSV------HAPSSRRTTLCGTLDYLPPEMIEGRM 182
Query: 342 YDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 401
+D KVD++S ++ E + G PPF N + Y R F P G ++LI
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLIS 238
Query: 402 ECWNEKPAKRPTFRQII 418
P++RP R+++
Sbjct: 239 RLLKHNPSQRPMLREVL 255
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 114/257 (44%), Gaps = 35/257 (13%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 57 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 108
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P
Sbjct: 109 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE-- 163
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR---YVAPEVFKNEE 341
N+L +G LK+ADFG S P + +D C Y+ PE+ +
Sbjct: 164 ---------NLLLGSAGELKIADFGWSV------HAPSSRRDDLCGTLDYLPPEMIEGRM 208
Query: 342 YDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 401
+D KVD++S ++ E + G PPF N + Y R F P G ++LI
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLIS 264
Query: 402 ECWNEKPAKRPTFRQII 418
P++RP R+++
Sbjct: 265 RLLKHNPSQRPMLREVL 281
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 129/278 (46%), Gaps = 47/278 (16%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 39 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
P G LR +L K K + +++ I +GM YL + IHRDL
Sbjct: 96 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLAT---------- 142
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVF 349
RNIL ++ +K+ DFG++K+L ++ + ++ + APE ++ DV+
Sbjct: 143 -RNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 201
Query: 350 SFALILQEMI-----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAK 390
SF ++L E+ PP + H E+ K RP P +
Sbjct: 202 SFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDE 260
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 428
+Y ++ ECWN +RP+FR + R++ I +++
Sbjct: 261 IYM-----IMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 29/254 (11%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 31 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 82
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P
Sbjct: 83 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE-- 137
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
N+L +G LK+ADFG S + R C + Y+ PE+ + +D
Sbjct: 138 ---------NLLLGSAGELKIADFGWS-VHAPSSRRAALC--GTLDYLPPEMIEGRMHDE 185
Query: 345 KVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECW 404
KVD++S ++ E + G PPF N + Y R F P G ++LI
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLL 241
Query: 405 NEKPAKRPTFRQII 418
P++RP R+++
Sbjct: 242 KHNPSQRPMLREVL 255
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 129/278 (46%), Gaps = 47/278 (16%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 42 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 98
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
P G LR +L K K + +++ I +GM YL + IHRDL
Sbjct: 99 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLAT---------- 145
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVF 349
RNIL ++ +K+ DFG++K+L ++ + ++ + APE ++ DV+
Sbjct: 146 -RNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 204
Query: 350 SFALILQEMI-----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAK 390
SF ++L E+ PP + H E+ K RP P +
Sbjct: 205 SFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDE 263
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 428
+Y ++ ECWN +RP+FR + R++ I +++
Sbjct: 264 IYM-----IMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 129/278 (46%), Gaps = 47/278 (16%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 46 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 102
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
P G LR +L K K + +++ I +GM YL + IHRDL
Sbjct: 103 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLAT---------- 149
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVF 349
RNIL ++ +K+ DFG++K+L ++ + ++ + APE ++ DV+
Sbjct: 150 -RNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 208
Query: 350 SFALILQEMI-----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAK 390
SF ++L E+ PP + H E+ K RP P +
Sbjct: 209 SFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDE 267
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 428
+Y ++ ECWN +RP+FR + R++ I +++
Sbjct: 268 IYM-----IMTECWNNNVNQRPSFRDLALRVDQIRDNM 300
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 129/278 (46%), Gaps = 47/278 (16%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 45 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 101
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
P G LR +L K K + +++ I +GM YL + IHRDL
Sbjct: 102 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLAT---------- 148
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVF 349
RNIL ++ +K+ DFG++K+L ++ + ++ + APE ++ DV+
Sbjct: 149 -RNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 207
Query: 350 SFALILQEMI-----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAK 390
SF ++L E+ PP + H E+ K RP P +
Sbjct: 208 SFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDE 266
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 428
+Y ++ ECWN +RP+FR + R++ I +++
Sbjct: 267 IYM-----IMTECWNNNVNQRPSFRDLALRVDQIRDNM 299
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 129/278 (46%), Gaps = 47/278 (16%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 57 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 113
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
P G LR +L K K + +++ I +GM YL + IHRDL
Sbjct: 114 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLAT---------- 160
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVF 349
RNIL ++ +K+ DFG++K+L ++ + ++ + APE ++ DV+
Sbjct: 161 -RNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 219
Query: 350 SFALILQEMI-----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAK 390
SF ++L E+ PP + H E+ K RP P +
Sbjct: 220 SFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDE 278
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 428
+Y ++ ECWN +RP+FR + R++ I +++
Sbjct: 279 IYM-----IMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 129/278 (46%), Gaps = 47/278 (16%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 38 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 94
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
P G LR +L K K + +++ I +GM YL + IHRDL
Sbjct: 95 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLAT---------- 141
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVF 349
RNIL ++ +K+ DFG++K+L ++ + ++ + APE ++ DV+
Sbjct: 142 -RNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 200
Query: 350 SFALILQEMI-----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAK 390
SF ++L E+ PP + H E+ K RP P +
Sbjct: 201 SFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDE 259
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 428
+Y ++ ECWN +RP+FR + R++ I +++
Sbjct: 260 IYM-----IMTECWNNNVNQRPSFRDLALRVDQIRDNM 292
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 129/278 (46%), Gaps = 47/278 (16%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 44 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 100
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
P G LR +L K K + +++ I +GM YL + IHRDL
Sbjct: 101 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLAT---------- 147
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVF 349
RNIL ++ +K+ DFG++K+L ++ + ++ + APE ++ DV+
Sbjct: 148 -RNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 206
Query: 350 SFALILQEMI-----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAK 390
SF ++L E+ PP + H E+ K RP P +
Sbjct: 207 SFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDE 265
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 428
+Y ++ ECWN +RP+FR + R++ I +++
Sbjct: 266 IYM-----IMTECWNNNVNQRPSFRDLALRVDQIRDNM 298
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 129/278 (46%), Gaps = 47/278 (16%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 43 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 99
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
P G LR +L K K + +++ I +GM YL + IHRDL
Sbjct: 100 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLAT---------- 146
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVF 349
RNIL ++ +K+ DFG++K+L ++ + ++ + APE ++ DV+
Sbjct: 147 -RNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 205
Query: 350 SFALILQEMI-----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAK 390
SF ++L E+ PP + H E+ K RP P +
Sbjct: 206 SFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDE 264
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 428
+Y ++ ECWN +RP+FR + R++ I +++
Sbjct: 265 IYM-----IMTECWNNNVNQRPSFRDLALRVDQIRDNM 297
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 32/288 (11%)
Query: 147 EYEIDPHELDFTNSV------EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDE 200
+YEI ++ + ++ +G ++ + VA+K + SD R + ++
Sbjct: 7 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC-KNCTSDSVREKFLQEA 65
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
L + Q HP++V+ +G +T++ P+ I+ E G+LR+FL+ RK +L ++ + +A +
Sbjct: 66 LTMRQ-FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 123
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+ + YL + +HRD+ RN+L + +K+ DFG+S+ +
Sbjct: 124 STALAYLESKR---FVHRDIAA-----------RNVLVSSNDCVKLGDFGLSRYMEDSTY 169
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQE-MIEGCPPFTMKHDNEVPKAYA 378
+ +++APE + + DV+ F + + E ++ G PF +N+V
Sbjct: 170 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 229
Query: 379 ARQRPPF--KAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+R P P LY+ L+ +CW P++RP F ++ +L +I
Sbjct: 230 NGERLPMPPNCPPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTI 272
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 29/254 (11%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 57 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 108
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P
Sbjct: 109 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE-- 163
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
N+L +G LK+ADFG S + R C + Y+ PE+ + +D
Sbjct: 164 ---------NLLLGSAGELKIADFGWS-VHAPSSRRTTLC--GTLDYLPPEMIEGRMHDE 211
Query: 345 KVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECW 404
KVD++S ++ E + G PPF N + Y R F P G ++LI
Sbjct: 212 KVDLWSLGVLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLL 267
Query: 405 NEKPAKRPTFRQII 418
P++RP R+++
Sbjct: 268 KHNPSQRPMLREVL 281
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 32/288 (11%)
Query: 147 EYEIDPHELDFTNSV------EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDE 200
+YEI ++ + ++ +G ++ + VA+K + SD R + ++
Sbjct: 9 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC-KNCTSDSVREKFLQEA 67
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
L + Q HP++V+ +G +T++ P+ I+ E G+LR+FL+ RK +L ++ + +A +
Sbjct: 68 LTMRQ-FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 125
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+ + YL + +HRD+ RN+L + +K+ DFG+S+ +
Sbjct: 126 STALAYLESKR---FVHRDIAA-----------RNVLVSSNDCVKLGDFGLSRYMEDSTY 171
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQE-MIEGCPPFTMKHDNEVPKAYA 378
+ +++APE + + DV+ F + + E ++ G PF +N+V
Sbjct: 172 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 231
Query: 379 ARQRPPF--KAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+R P P LY+ L+ +CW P++RP F ++ +L +I
Sbjct: 232 NGERLPMPPNCPPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTI 274
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 32/288 (11%)
Query: 147 EYEIDPHELDFTNSV------EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDE 200
+YEI ++ + ++ +G ++ + VA+K + SD R + ++
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC-KNCTSDSVREKFLQEA 62
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
L + Q HP++V+ +G +T++ P+ I+ E G+LR+FL+ RK +L ++ + +A +
Sbjct: 63 LTMRQ-FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 120
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+ + YL + +HRD+ RN+L + +K+ DFG+S+ +
Sbjct: 121 STALAYLESKR---FVHRDIAA-----------RNVLVSSNDCVKLGDFGLSRYMEDSTY 166
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQE-MIEGCPPFTMKHDNEVPKAYA 378
+ +++APE + + DV+ F + + E ++ G PF +N+V
Sbjct: 167 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 226
Query: 379 ARQRPPF--KAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+R P P LY+ L+ +CW P++RP F ++ +L +I
Sbjct: 227 NGERLPMPPNCPPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 32/288 (11%)
Query: 147 EYEIDPHELDFTNSV------EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDE 200
+YEI ++ + ++ +G ++ + VA+K + SD R + ++
Sbjct: 6 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC-KNCTSDSVREKFLQEA 64
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
L + Q HP++V+ +G +T++ P+ I+ E G+LR+FL+ RK +L ++ + +A +
Sbjct: 65 LTMRQ-FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 122
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+ + YL + +HRD+ RN+L + +K+ DFG+S+ +
Sbjct: 123 STALAYLESKR---FVHRDIAA-----------RNVLVSSNDCVKLGDFGLSRYMEDSTY 168
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQE-MIEGCPPFTMKHDNEVPKAYA 378
+ +++APE + + DV+ F + + E ++ G PF +N+V
Sbjct: 169 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 228
Query: 379 ARQRPPF--KAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+R P P LY+ L+ +CW P++RP F ++ +L +I
Sbjct: 229 NGERLPMPPNCPPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTI 271
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 128/278 (46%), Gaps = 47/278 (16%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 37 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 93
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
P G LR +L K K + +++ I +GM YL + IHRDL
Sbjct: 94 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLAT---------- 140
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVF 349
RNIL ++ +K+ DFG++K+L ++ + ++ + APE ++ DV+
Sbjct: 141 -RNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 199
Query: 350 SFALILQEMI-----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAK 390
SF ++L E+ PP + H E+ K RP P +
Sbjct: 200 SFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDE 258
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 428
+Y ++ ECWN +RP+FR + R++ I + +
Sbjct: 259 IYM-----IMTECWNNNVNQRPSFRDLALRVDQIRDQM 291
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 32/288 (11%)
Query: 147 EYEIDPHELDFTNSV------EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDE 200
+YEI ++ + ++ +G ++ + VA+K + SD R + ++
Sbjct: 32 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC-KNCTSDSVREKFLQEA 90
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
L + Q HP++V+ +G +T++ P+ I+ E G+LR+FL+ RK +L ++ + +A +
Sbjct: 91 LTMRQ-FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 148
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+ + YL + +HRD+ RN+L + +K+ DFG+S+ +
Sbjct: 149 STALAYLESKR---FVHRDIAA-----------RNVLVSSNDCVKLGDFGLSRYMEDSTY 194
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQE-MIEGCPPFTMKHDNEVPKAYA 378
+ +++APE + + DV+ F + + E ++ G PF +N+V
Sbjct: 195 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 254
Query: 379 ARQRPPF--KAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+R P P LY+ L+ +CW P++RP F ++ +L +I
Sbjct: 255 NGERLPMPPNCPPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTI 297
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 32/288 (11%)
Query: 147 EYEIDPHELDFTNSV------EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDE 200
+YEI ++ + ++ +G ++ + VA+K + SD R + ++
Sbjct: 1 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC-KNCTSDSVREKFLQEA 59
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
L + Q HP++V+ +G +T++ P+ I+ E G+LR+FL+ RK +L ++ + +A +
Sbjct: 60 LTMRQ-FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 117
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+ + YL + +HRD+ RN+L + +K+ DFG+S+ +
Sbjct: 118 STALAYLESKR---FVHRDIAA-----------RNVLVSSNDCVKLGDFGLSRYMEDSTY 163
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQE-MIEGCPPFTMKHDNEVPKAYA 378
+ +++APE + + DV+ F + + E ++ G PF +N+V
Sbjct: 164 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 223
Query: 379 ARQRPPF--KAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+R P P LY+ L+ +CW P++RP F ++ +L +I
Sbjct: 224 NGERLPMPPNCPPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTI 266
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 32/288 (11%)
Query: 147 EYEIDPHELDFTNSV------EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDE 200
+YEI ++ + ++ +G ++ + VA+K + SD R + ++
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTC-KNCTSDSVREKFLQEA 62
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
L + Q HP++V+ +G +T++ P+ I+ E G+LR+FL+ RK +L ++ + +A +
Sbjct: 63 LTMRQ-FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 120
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+ + YL + +HRD+ RN+L + +K+ DFG+S+ +
Sbjct: 121 STALAYLESKR---FVHRDIAA-----------RNVLVSSNDCVKLGDFGLSRYMEDSTY 166
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQE-MIEGCPPFTMKHDNEVPKAYA 378
+ +++APE + + DV+ F + + E ++ G PF +N+V
Sbjct: 167 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 226
Query: 379 ARQRPPF--KAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+R P P LY+ L+ +CW P++RP F ++ +L +I
Sbjct: 227 NGERLPMPPNCPPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 29/254 (11%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 36 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 87
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P
Sbjct: 88 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE-- 142
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
N+L +G LK+ADFG S + R C + Y+ PE+ + +D
Sbjct: 143 ---------NLLLGSAGELKIADFGWS-VHAPSSRRTDLC--GTLDYLPPEMIEGRMHDE 190
Query: 345 KVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECW 404
KVD++S ++ E + G PPF N + Y R F P G ++LI
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLL 246
Query: 405 NEKPAKRPTFRQII 418
P++RP R+++
Sbjct: 247 KHNPSQRPMLREVL 260
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 128/278 (46%), Gaps = 47/278 (16%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 70 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 126
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
P G LR +L K K + +++ I +GM YL + IHRDL
Sbjct: 127 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLAT---------- 173
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVF 349
RNIL ++ +K+ DFG++K+L ++ + ++ + APE ++ DV+
Sbjct: 174 -RNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 232
Query: 350 SFALILQEMI-----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAK 390
SF ++L E+ PP + H E+ K RP P +
Sbjct: 233 SFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDE 291
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 428
+Y ++ ECWN +RP+FR + R++ I + +
Sbjct: 292 IYM-----IMTECWNNNVNQRPSFRDLALRVDQIRDQM 324
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 29/254 (11%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 31 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 82
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P
Sbjct: 83 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE-- 137
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
N+L +G LK+ADFG S + R C + Y+ PE+ + +D
Sbjct: 138 ---------NLLLGSAGELKIADFGWS-VHAPSSRRTDLC--GTLDYLPPEMIEGRMHDE 185
Query: 345 KVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECW 404
KVD++S ++ E + G PPF N + Y R F P G ++LI
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLL 241
Query: 405 NEKPAKRPTFRQII 418
P++RP R+++
Sbjct: 242 KHNPSQRPMLREVL 255
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 29/254 (11%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 31 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 82
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P
Sbjct: 83 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE-- 137
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
N+L +G LK+ADFG S + R C + Y+ PE+ + +D
Sbjct: 138 ---------NLLLGSAGELKIADFGWS-VHAPSSRRTELC--GTLDYLPPEMIEGRMHDE 185
Query: 345 KVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECW 404
KVD++S ++ E + G PPF N + Y R F P G ++LI
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLL 241
Query: 405 NEKPAKRPTFRQII 418
P++RP R+++
Sbjct: 242 KHNPSQRPMLREVL 255
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 29/254 (11%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 31 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 82
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P
Sbjct: 83 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE-- 137
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
N+L +G LK+ADFG S + R C + Y+ PE+ + +D
Sbjct: 138 ---------NLLLGSAGELKIADFGWS-VHAPSSRRTDLC--GTLDYLPPEMIEGRMHDE 185
Query: 345 KVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECW 404
KVD++S ++ E + G PPF N + Y R F P G ++LI
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLL 241
Query: 405 NEKPAKRPTFRQII 418
P++RP R+++
Sbjct: 242 KHNPSQRPMLREVL 255
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 32/288 (11%)
Query: 147 EYEIDPHELDFTNSV------EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDE 200
+YEI ++ + ++ +G ++ + VA+K + SD R + ++
Sbjct: 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTC-KNCTSDSVREKFLQEA 442
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
L + Q HP++V+ +G +T++ P+ I+ E G+LR+FL+ RK +L ++ + +A +
Sbjct: 443 LTMRQ-FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQL 500
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+ + YL + +HRD+ RN+L + +K+ DFG+S+ +
Sbjct: 501 STALAYLESKR---FVHRDIAA-----------RNVLVSSNDCVKLGDFGLSRYMEDSTY 546
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQE-MIEGCPPFTMKHDNEVPKAYA 378
+ +++APE + + DV+ F + + E ++ G PF +N+V
Sbjct: 547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 606
Query: 379 ARQRPPF--KAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+R P P LY+ L+ +CW P++RP F ++ +L +I
Sbjct: 607 NGERLPMPPNCPPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 29/254 (11%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 32 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 83
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P
Sbjct: 84 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE-- 138
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
N+L +G LK+ADFG S + R C + Y+ PE+ + +D
Sbjct: 139 ---------NLLLGSAGELKIADFGWS-VHAPSSRRTDLC--GTLDYLPPEMIEGRMHDE 186
Query: 345 KVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECW 404
KVD++S ++ E + G PPF N + Y R F P G ++LI
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLL 242
Query: 405 NEKPAKRPTFRQII 418
P++RP R+++
Sbjct: 243 KHNPSQRPMLREVL 256
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 129/278 (46%), Gaps = 47/278 (16%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 39 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
P G LR +L K K + +++ I +GM YL + IHRDL
Sbjct: 96 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLAT---------- 142
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKED--RPLTCQDTSCRYVAPEVFKNEEYDTKVDVF 349
RNIL ++ +K+ DFG++K+L ++ + ++ + APE ++ DV+
Sbjct: 143 -RNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVW 201
Query: 350 SFALILQEMI-----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAK 390
SF ++L E+ PP + H E+ K RP P +
Sbjct: 202 SFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDE 260
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 428
+Y ++ ECWN +RP+FR + R++ I +++
Sbjct: 261 IYM-----IMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 32/288 (11%)
Query: 147 EYEIDPHELDFTNSV------EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDE 200
+YEI ++ + ++ +G ++ + VA+K + SD R + ++
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTC-KNCTSDSVREKFLQEA 62
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
L + Q HP++V+ +G +T++ P+ I+ E G+LR+FL+ RK +L ++ + +A +
Sbjct: 63 LTMRQ-FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQL 120
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+ + YL + +HRD+ RN+L + +K+ DFG+S+ +
Sbjct: 121 STALAYLESKR---FVHRDIAA-----------RNVLVSATDCVKLGDFGLSRYMEDSTY 166
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQE-MIEGCPPFTMKHDNEVPKAYA 378
+ +++APE + + DV+ F + + E ++ G PF +N+V
Sbjct: 167 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 226
Query: 379 ARQRPPF--KAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+R P P LY+ L+ +CW P++RP F ++ +L +I
Sbjct: 227 NGERLPMPPNCPPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 32/288 (11%)
Query: 147 EYEIDPHELDFTNSV------EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDE 200
+YEI ++ + ++ +G ++ + VA+K + SD R + ++
Sbjct: 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTC-KNCTSDSVREKFLQEA 442
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
L + Q HP++V+ +G +T++ P+ I+ E G+LR+FL+ RK +L ++ + +A +
Sbjct: 443 LTMRQ-FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQL 500
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+ + YL + +HRD+ RN+L + +K+ DFG+S+ +
Sbjct: 501 STALAYLESKR---FVHRDIAA-----------RNVLVSATDCVKLGDFGLSRYMEDSTY 546
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQE-MIEGCPPFTMKHDNEVPKAYA 378
+ +++APE + + DV+ F + + E ++ G PF +N+V
Sbjct: 547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 606
Query: 379 ARQRPPF--KAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+R P P LY+ L+ +CW P++RP F ++ +L +I
Sbjct: 607 NGERLPMPPNCPPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 114/257 (44%), Gaps = 35/257 (13%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 34 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 85
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P
Sbjct: 86 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE-- 140
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR---YVAPEVFKNEE 341
N+L +G LK+A+FG S P + + T C Y+ PE+ +
Sbjct: 141 ---------NLLLGSAGELKIANFGWSV------HAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 342 YDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 401
+D KVD++S ++ E + G PPF N + Y R F P G ++LI
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLIS 241
Query: 402 ECWNEKPAKRPTFRQII 418
P++RP R+++
Sbjct: 242 RLLKHNPSQRPMLREVL 258
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 114/257 (44%), Gaps = 35/257 (13%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 33 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 84
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P
Sbjct: 85 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE-- 139
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR---YVAPEVFKNEE 341
N+L +G LK+A+FG S P + + T C Y+ PE+ +
Sbjct: 140 ---------NLLLGSAGELKIANFGWSV------HAPSSRRTTLCGTLDYLPPEMIEGRM 184
Query: 342 YDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 401
+D KVD++S ++ E + G PPF N + Y R F P G ++LI
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLIS 240
Query: 402 ECWNEKPAKRPTFRQII 418
P++RP R+++
Sbjct: 241 RLLKHNPSQRPMLREVL 257
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 129/278 (46%), Gaps = 47/278 (16%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ E+L
Sbjct: 42 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFL 98
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
P G LR +L K K + +++ I +GM YL + IHRDL
Sbjct: 99 PYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLAT---------- 145
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVF 349
RNIL ++ +K+ DFG++K+L ++ + ++ + APE ++ DV+
Sbjct: 146 -RNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 204
Query: 350 SFALILQEMI-----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAK 390
SF ++L E+ PP + H E+ K RP P +
Sbjct: 205 SFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDE 263
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 428
+Y ++ ECWN +RP+FR + R++ I +++
Sbjct: 264 IYM-----IMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 136/294 (46%), Gaps = 40/294 (13%)
Query: 144 EVPEYEIDPHELDFTNSVEITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRDE 200
E+P+ +I T I G+F + W G VAVK L + +++AF++E
Sbjct: 8 EIPDGQI-------TVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNE 58
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFL-KRKGALKPSTAVRFALDI 259
+ +L+K RH N++ F+G T+ + IVT++ L L + + + A
Sbjct: 59 VGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQT 117
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
ARGM+YLH IIHRDL+ + NI + +K+ DFG L TVK
Sbjct: 118 ARGMDYLHAKS---IIHRDLKSN-----------NIFLHEDNTVKIGDFG---LATVKSR 160
Query: 320 RPLTCQ----DTSCRYVAPEVFKNEE---YDTKVDVFSFALILQEMIEGCPPFT--MKHD 370
+ Q S ++APEV + ++ Y + DV++F ++L E++ G P++ D
Sbjct: 161 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 220
Query: 371 NEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+ P + +K L+ EC +K +RP+F +I+ +E +
Sbjct: 221 QIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 274
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 122/263 (46%), Gaps = 32/263 (12%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS-----PM-MIVT 229
++VAVK L ++I+ D + F E A +++ HP+V + +G +S P+ M++
Sbjct: 52 VKVAVKMLKADIIASSD-IEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVIL 110
Query: 230 EYLPKGDLRAFL--KRKGA----LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSD 283
++ GDL AFL R G L T VRF +DIA GM YL IHRDL
Sbjct: 111 PFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAA-- 165
Query: 284 LYVAYWQNDRNILRDDSGNLKVADFGVS-KLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY 342
RN + + + VADFG+S K+ + R +++A E + Y
Sbjct: 166 ---------RNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLY 216
Query: 343 DTKVDVFSFALILQE-MIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 401
DV++F + + E M G P+ + E+ R K P + + +L+
Sbjct: 217 TVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNR--LKQPPECMEE-VYDLMY 273
Query: 402 ECWNEKPAKRPTFRQIITRLESI 424
+CW+ P +RP+F + LE+I
Sbjct: 274 QCWSADPKQRPSFTCLRMELENI 296
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 131/278 (47%), Gaps = 38/278 (13%)
Query: 147 EYEIDPHELDFTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDEL 201
+YE D + + V + KGT+ + + +++A+K++ E D + +E+
Sbjct: 4 DYEYDEN----GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER---DSRYSQPLHEEI 56
Query: 202 ALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRK-GALKPS--TAVRFALD 258
AL + ++H N+VQ+LG+ +++ + I E +P G L A L+ K G LK + T +
Sbjct: 57 ALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ 116
Query: 259 IARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKE 318
I G+ YLH+N+ I+HRD+ + D ++ SG LK++DFG SK L
Sbjct: 117 ILEGLKYLHDNQ---IVHRDI----------KGDNVLINTYSGVLKISDFGTSKRLAGIN 163
Query: 319 DRPLTCQDT---SCRYVAPEVFKN--EEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 373
C +T + +Y+APE+ Y D++S + EM G PPF + +
Sbjct: 164 ----PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA 219
Query: 374 PKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKR 411
+ + P + A K I +C+ P KR
Sbjct: 220 AMFKVGMFKVHPEIPESMSAEA-KAFILKCFEPDPDKR 256
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 117/242 (48%), Gaps = 22/242 (9%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+VA+K + +++ D E++ L+ +RHP++++ +T + +++V EY G+
Sbjct: 36 KVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGE 94
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
L ++ K + RF I + Y H +K I+HRDL+P N+L
Sbjct: 95 LFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPE-----------NLL 140
Query: 297 RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY-DTKVDVFSFALIL 355
DD+ N+K+ADFG+S ++T +C S Y APEV + Y +VDV+S ++L
Sbjct: 141 LDDNLNVKIADFGLSNIMTDGNFLKTSC--GSPNYAAPEVINGKLYAGPEVDVWSCGIVL 198
Query: 356 QEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 415
M+ G PF D +P + + P L + G + LI P +R T +
Sbjct: 199 YVMLVGRLPFD---DEFIPNLFKKVNSCVYVMPDFL-SPGAQSLIRRMIVADPMQRITIQ 254
Query: 416 QI 417
+I
Sbjct: 255 EI 256
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 131/278 (47%), Gaps = 38/278 (13%)
Query: 147 EYEIDPHELDFTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDEL 201
+YE D + + V + KGT+ + + +++A+K++ E D + +E+
Sbjct: 18 DYEYDEN----GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER---DSRYSQPLHEEI 70
Query: 202 ALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRK-GALKPS--TAVRFALD 258
AL + ++H N+VQ+LG+ +++ + I E +P G L A L+ K G LK + T +
Sbjct: 71 ALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ 130
Query: 259 IARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKE 318
I G+ YLH+N+ I+HRD+ + D ++ SG LK++DFG SK L
Sbjct: 131 ILEGLKYLHDNQ---IVHRDI----------KGDNVLINTYSGVLKISDFGTSKRLAGIN 177
Query: 319 DRPLTCQDT---SCRYVAPEVFKN--EEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 373
C +T + +Y+APE+ Y D++S + EM G PPF + +
Sbjct: 178 ----PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA 233
Query: 374 PKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKR 411
+ + P + A K I +C+ P KR
Sbjct: 234 AMFKVGMFKVHPEIPESMSAEA-KAFILKCFEPDPDKR 270
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 126/274 (45%), Gaps = 29/274 (10%)
Query: 152 PHELDFTNSVEITKGTFI---LA--FWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
PH ++ I KG F LA G +VAVK + + ++ + FR E+ +++
Sbjct: 11 PHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKV 69
Query: 207 IRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
+ HPN+V+ + + +V EY G++ +L G +K A I + Y
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD 326
H+ I+HRDL+ N+L D N+K+ADFG S T C
Sbjct: 130 HQK---FIVHRDLKAE-----------NLLLDADMNIKIADFGFSNEFTFGNKLDTFC-- 173
Query: 327 TSCRYVAPEVFKNEEYDT-KVDVFSFALILQEMIEGCPPFTMKHDNEV-PKAYAARQRPP 384
S Y APE+F+ ++YD +VDV+S +IL ++ G PF ++ E+ + + R P
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 233
Query: 385 FKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
F + + L+++ P+KR T QI+
Sbjct: 234 F-----YMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 125/274 (45%), Gaps = 29/274 (10%)
Query: 152 PHELDFTNSVEITKGTFI---LA--FWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
PH ++ I KG F LA G +VAVK + + ++ + FR E+ +++
Sbjct: 11 PHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKV 69
Query: 207 IRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
+ HPN+V+ + + +V EY G++ +L G +K A I + Y
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD 326
H+ I+HRDL+ N+L D N+K+ADFG S T C
Sbjct: 130 HQK---FIVHRDLKAE-----------NLLLDADMNIKIADFGFSNEFTFGNKLDTFC-- 173
Query: 327 TSCRYVAPEVFKNEEYDT-KVDVFSFALILQEMIEGCPPFTMKHDNEV-PKAYAARQRPP 384
S Y APE+F+ ++YD +VDV+S +IL ++ G PF ++ E+ + + R P
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 233
Query: 385 FKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
F + L+++ P+KR T QI+
Sbjct: 234 FYMSTD-----CENLLKKFLILNPSKRGTLEQIM 262
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 126/274 (45%), Gaps = 29/274 (10%)
Query: 152 PHELDFTNSVEITKGTFI---LA--FWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
PH ++ I KG F LA G +VA+K + + ++ + FR E+ +++
Sbjct: 9 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKI 67
Query: 207 IRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
+ HPN+V+ + + ++ EY G++ +L G +K A I + Y
Sbjct: 68 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYC 127
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD 326
H+ + I+HRDL+ N+L D N+K+ADFG S TV C
Sbjct: 128 HQKR---IVHRDLKAE-----------NLLLDADMNIKIADFGFSNEFTVGGKLDTFC-- 171
Query: 327 TSCRYVAPEVFKNEEYDT-KVDVFSFALILQEMIEGCPPFTMKHDNEV-PKAYAARQRPP 384
S Y APE+F+ ++YD +VDV+S +IL ++ G PF ++ E+ + + R P
Sbjct: 172 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 231
Query: 385 FKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
F + + L++ P KR T QI+
Sbjct: 232 F-----YMSTDCENLLKRFLVLNPIKRGTLEQIM 260
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 120/267 (44%), Gaps = 41/267 (15%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VAVK L + + D+ + F E LL ++H ++V+F G + P+++V EY+ G
Sbjct: 44 ILVAVKTLKD---ASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHG 100
Query: 236 DLRAFLKRKG-------------ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
DL FL+ G L S + A IA GM YL +HRDL
Sbjct: 101 DLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLA-- 155
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEE 341
RN L ++ +K+ DFG+S+ + + R R++ PE +
Sbjct: 156 ---------TRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRK 206
Query: 342 YDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAYA---ARQRPPFKAPAKLYARGLK 397
+ T+ DV+S ++L E+ G P+ +NEV + QRP P ++Y
Sbjct: 207 FTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPR-TCPQEVY----- 260
Query: 398 ELIEECWNEKPAKRPTFRQIITRLESI 424
EL+ CW +P R + I T L+++
Sbjct: 261 ELMLGCWQREPHMRKNIKGIHTLLQNL 287
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 129/278 (46%), Gaps = 47/278 (16%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 40 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 96
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
P G LR +L K K + +++ I +GM YL + IHR+L
Sbjct: 97 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRNLAT---------- 143
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVF 349
RNIL ++ +K+ DFG++K+L ++ + ++ + APE ++ DV+
Sbjct: 144 -RNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVW 202
Query: 350 SFALILQEMI-----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAK 390
SF ++L E+ PP + H E+ K RP P +
Sbjct: 203 SFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDE 261
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 428
+Y ++ ECWN +RP+FR + R++ I +++
Sbjct: 262 IYM-----IMTECWNNNVNQRPSFRDLALRVDQIRDNM 294
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 141/292 (48%), Gaps = 51/292 (17%)
Query: 158 TNSVEITKGTFILAF---WRGI-------QVAVKKLGEEVISDDDRVRAFRDELALLQKI 207
T S E+ +G+F + + +G+ +VA+K + E S +R+ F +E +++++
Sbjct: 18 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIE-FLNEASVMKEF 75
Query: 208 RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTA-------------VR 254
+VV+ LG V+Q P +++ E + +GDL+++L+ +L+P+ A ++
Sbjct: 76 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR---SLRPAMANNPVLAPPSLSKMIQ 132
Query: 255 FALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-L 313
A +IA GM YL+ NK +HRDL RN + + +K+ DFG+++ +
Sbjct: 133 MAGEIADGMAYLNANK---FVHRDLAA-----------RNCMVAEDFTVKIGDFGMTRDI 178
Query: 314 LTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNE 372
R R+++PE K+ + T DV+SF ++L E+ P+ + +
Sbjct: 179 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 238
Query: 373 VPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLE 422
V + P P L+ EL+ CW P RP+F +II+ ++
Sbjct: 239 VLRFVMEGGLLDKPDNCPDMLF-----ELMRMCWQYNPKMRPSFLEIISSIK 285
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 122/251 (48%), Gaps = 39/251 (15%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+VAVK + +S V AF E +++ ++H +V+ L AV P+ I+TE++ KG
Sbjct: 208 KVAVKTMKPGSMS----VEAFLAEANVMKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGS 262
Query: 237 LRAFLKR-KGALKP-STAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L FLK +G+ +P + F+ IA GM ++ + IHRDL + N
Sbjct: 263 LLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAA-----------N 308
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
IL S K+ADFG+++ V P+ ++ APE + K DV+SF ++
Sbjct: 309 ILVSASLVCKIADFGLAR---VGAKFPI-------KWTAPEAINFGSFTIKSDVWSFGIL 358
Query: 355 LQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKR 411
L E++ G P+ + EV +A R P P +LY ++ CW +P +R
Sbjct: 359 LMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELY-----NIMMRCWKNRPEER 413
Query: 412 PTFRQIITRLE 422
PTF I + L+
Sbjct: 414 PTFEYIQSVLD 424
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 140/292 (47%), Gaps = 51/292 (17%)
Query: 158 TNSVEITKGTFILAF---WRGI-------QVAVKKLGEEVISDDDRVRAFRDELALLQKI 207
T S E+ +G+F + + +G+ +VA+K + E S +R+ F +E +++++
Sbjct: 22 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-NEAASMRERIE-FLNEASVMKEF 79
Query: 208 RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKP-------------STAVR 254
+VV+ LG V+Q P +++ E + +GDL+++L+ +L+P S ++
Sbjct: 80 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR---SLRPEMENNPVLAPPSLSKMIQ 136
Query: 255 FALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-L 313
A +IA GM YL+ NK +HRDL RN + + +K+ DFG+++ +
Sbjct: 137 MAGEIADGMAYLNANK---FVHRDLAA-----------RNCMVAEDFTVKIGDFGMTRDI 182
Query: 314 LTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNE 372
R R+++PE K+ + T DV+SF ++L E+ P+ + +
Sbjct: 183 XETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 242
Query: 373 VPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLE 422
V + P P L+ EL+ CW P RP+F +II+ ++
Sbjct: 243 VLRFVMEGGLLDKPDNCPDMLF-----ELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 115/246 (46%), Gaps = 24/246 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G +VAVK + + ++ + FR E+ +++ + HPN+V+ + + +V EY
Sbjct: 32 GKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 90
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ +L G +K A I + Y H+ I+HRDL+ N
Sbjct: 91 GEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQK---FIVHRDLKAE-----------N 136
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT-KVDVFSFAL 353
+L D N+K+ADFG S T C S Y APE+F+ ++YD +VDV+S +
Sbjct: 137 LLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPELFQGKKYDGPEVDVWSLGV 194
Query: 354 ILQEMIEGCPPFTMKHDNEV-PKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
IL ++ G PF ++ E+ + + R PF + L+++ P+KR
Sbjct: 195 ILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTD-----CENLLKKFLILNPSKRG 249
Query: 413 TFRQII 418
T QI+
Sbjct: 250 TLEQIM 255
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 125/277 (45%), Gaps = 58/277 (20%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQ-SSPMMIVTEYLPKG 235
VAVK L E + R A EL +L I H NVV LGA T+ P+M++TE+ G
Sbjct: 51 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 236 DLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDL 279
+L +L+ K L + ++ +A+GM +L K IHRDL
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 165
Query: 280 EPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDR--------PLTCQDTSCRY 331
RNIL + +K+ DFG+++ + D PL ++
Sbjct: 166 AA-----------RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL-------KW 207
Query: 332 VAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKA 387
+APE + Y + DV+SF ++L E+ G P+ +K D E + R R P
Sbjct: 208 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYT 267
Query: 388 PAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++Y L +CW+ +P++RPTF +++ L ++
Sbjct: 268 TPEMYQTML-----DCWHGEPSQRPTFSELVEHLGNL 299
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 128/278 (46%), Gaps = 47/278 (16%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 42 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 98
Query: 233 PKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
P G LR +L+ + +++ I +GM YL + IHRDL
Sbjct: 99 PYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLAT---------- 145
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVF 349
RNIL ++ +K+ DFG++K+L ++ + ++ + APE ++ DV+
Sbjct: 146 -RNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 204
Query: 350 SFALILQEMI-----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAK 390
SF ++L E+ PP + H E+ K RP P +
Sbjct: 205 SFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDE 263
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 428
+Y ++ ECWN +RP+FR + R++ I +++
Sbjct: 264 IYM-----IMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 142/301 (47%), Gaps = 46/301 (15%)
Query: 144 EVPEYEIDPHELDFTNSVEITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRDE 200
E+P+ +I T I G+F + W G VAVK L + +++AF++E
Sbjct: 32 EIPDGQI-------TVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNE 82
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
+ +L+K RH N++ F+G T+ + IVT++ L L + + + A
Sbjct: 83 VGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 141
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
A+GM+YLH IIHRDL+ + NI + +K+ DFG L TVK
Sbjct: 142 AQGMDYLHAKS---IIHRDLKSN-----------NIFLHEDLTVKIGDFG---LATVKSR 184
Query: 320 RPLTCQ----DTSCRYVAPEVFKNEE---YDTKVDVFSFALILQEMIEGCPPFTMKHDNE 372
+ Q S ++APEV + ++ Y + DV++F ++L E++ G P++ ++ +
Sbjct: 185 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 244
Query: 373 -----VPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
V + Y + P + +K L+ EC +K +RP F QI+ +E + S
Sbjct: 245 QIIFMVGRGYLS---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 301
Query: 428 I 428
+
Sbjct: 302 L 302
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 141/292 (48%), Gaps = 51/292 (17%)
Query: 158 TNSVEITKGTFILAF---WRGI-------QVAVKKLGEEVISDDDRVRAFRDELALLQKI 207
T S E+ +G+F + + +G+ +VA+K + E S +R+ F +E +++++
Sbjct: 28 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIE-FLNEASVMKEF 85
Query: 208 RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTA-------------VR 254
+VV+ LG V+Q P +++ E + +GDL+++L+ +L+P+ A ++
Sbjct: 86 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR---SLRPAMANNPVLAPPSLSKMIQ 142
Query: 255 FALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-L 313
A +IA GM YL+ NK +HRDL RN + + +K+ DFG+++ +
Sbjct: 143 MAGEIADGMAYLNANK---FVHRDLAA-----------RNCMVAEDFTVKIGDFGMTRDI 188
Query: 314 LTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNE 372
R R+++PE K+ + T DV+SF ++L E+ P+ + +
Sbjct: 189 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 248
Query: 373 VPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLE 422
V + P P L+ EL+ CW P RP+F +II+ ++
Sbjct: 249 VLRFVMEGGLLDKPDNCPDMLF-----ELMRMCWQYNPKMRPSFLEIISSIK 295
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 122/266 (45%), Gaps = 40/266 (15%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQ-SSPMMIVTEYLPKG 235
VAVK L E + R A EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 60 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 236 DLRAFLKRK------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSD 283
+L +L+ K L + ++ +A+GM +L K IHRDL
Sbjct: 118 NLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRK---XIHRDLAA-- 172
Query: 284 LYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD-TSCRYVAPEVFKNEEY 342
RNIL + +K+ DFG+++ + D +++APE + Y
Sbjct: 173 ---------RNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 223
Query: 343 DTKVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKE 398
+ DV+SF ++L E+ G P+ +K D E + R R P ++Y L
Sbjct: 224 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRAPDYTTPEMYQTML-- 281
Query: 399 LIEECWNEKPAKRPTFRQIITRLESI 424
+CW+ +P++RPTF +++ L ++
Sbjct: 282 ---DCWHGEPSQRPTFSELVEHLGNL 304
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 125/277 (45%), Gaps = 58/277 (20%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQ-SSPMMIVTEYLPKG 235
VAVK L E + R A EL +L I H NVV LGA T+ P+M++TE+ G
Sbjct: 51 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 236 DLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDL 279
+L +L+ K L + ++ +A+GM +L K IHRDL
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 165
Query: 280 EPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDR--------PLTCQDTSCRY 331
RNIL + +K+ DFG+++ + D PL ++
Sbjct: 166 AA-----------RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL-------KW 207
Query: 332 VAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKA 387
+APE + Y + DV+SF ++L E+ G P+ +K D E + R R P
Sbjct: 208 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYT 267
Query: 388 PAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++Y L +CW+ +P++RPTF +++ L ++
Sbjct: 268 TPEMYQTML-----DCWHGEPSQRPTFSELVEHLGNL 299
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 142/301 (47%), Gaps = 46/301 (15%)
Query: 144 EVPEYEIDPHELDFTNSVEITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRDE 200
E+P+ +I T I G+F + W G VAVK L + +++AF++E
Sbjct: 31 EIPDGQI-------TVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNE 81
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
+ +L+K RH N++ F+G T+ + IVT++ L L + + + A
Sbjct: 82 VGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 140
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
A+GM+YLH IIHRDL+ + NI + +K+ DFG L TVK
Sbjct: 141 AQGMDYLHAKS---IIHRDLKSN-----------NIFLHEDLTVKIGDFG---LATVKSR 183
Query: 320 RPLTCQ----DTSCRYVAPEVFKNEE---YDTKVDVFSFALILQEMIEGCPPFTMKHDNE 372
+ Q S ++APEV + ++ Y + DV++F ++L E++ G P++ ++ +
Sbjct: 184 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 243
Query: 373 -----VPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
V + Y + P + +K L+ EC +K +RP F QI+ +E + S
Sbjct: 244 QIIFMVGRGYLS---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 300
Query: 428 I 428
+
Sbjct: 301 L 301
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 125/277 (45%), Gaps = 58/277 (20%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQ-SSPMMIVTEYLPKG 235
VAVK L E + R A EL +L I H NVV LGA T+ P+M++TE+ G
Sbjct: 51 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 236 DLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDL 279
+L +L+ K L + ++ +A+GM +L K IHRDL
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 165
Query: 280 EPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDR--------PLTCQDTSCRY 331
RNIL + +K+ DFG+++ + D PL ++
Sbjct: 166 AA-----------RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL-------KW 207
Query: 332 VAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKA 387
+APE + Y + DV+SF ++L E+ G P+ +K D E + R R P
Sbjct: 208 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYT 267
Query: 388 PAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++Y L +CW+ +P++RPTF +++ L ++
Sbjct: 268 TPEMYQTML-----DCWHGEPSQRPTFSELVEHLGNL 299
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 140/292 (47%), Gaps = 51/292 (17%)
Query: 158 TNSVEITKGTFILAF---WRGI-------QVAVKKLGEEVISDDDRVRAFRDELALLQKI 207
T S E+ +G+F + + +G+ +VA+K + E S +R+ F +E +++++
Sbjct: 50 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIE-FLNEASVMKEF 107
Query: 208 RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKP-------------STAVR 254
+VV+ LG V+Q P +++ E + +GDL+++L+ +L+P S ++
Sbjct: 108 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR---SLRPEMENNPVLAPPSLSKMIQ 164
Query: 255 FALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-L 313
A +IA GM YL+ NK +HRDL RN + + +K+ DFG+++ +
Sbjct: 165 MAGEIADGMAYLNANK---FVHRDLAA-----------RNCMVAEDFTVKIGDFGMTRDI 210
Query: 314 LTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNE 372
R R+++PE K+ + T DV+SF ++L E+ P+ + +
Sbjct: 211 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 270
Query: 373 VPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLE 422
V + P P L+ EL+ CW P RP+F +II+ ++
Sbjct: 271 VLRFVMEGGLLDKPDNCPDMLF-----ELMRMCWQYNPKMRPSFLEIISSIK 317
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 125/274 (45%), Gaps = 29/274 (10%)
Query: 152 PHELDFTNSVEITKGTFI---LA--FWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
PH ++ I KG F LA G +VAV+ + + ++ + FR E+ +++
Sbjct: 11 PHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKV 69
Query: 207 IRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
+ HPN+V+ + + +V EY G++ +L G +K A I + Y
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD 326
H+ I+HRDL+ N+L D N+K+ADFG S T C
Sbjct: 130 HQK---FIVHRDLKAE-----------NLLLDADMNIKIADFGFSNEFTFGNKLDTFC-- 173
Query: 327 TSCRYVAPEVFKNEEYDT-KVDVFSFALILQEMIEGCPPFTMKHDNEV-PKAYAARQRPP 384
S Y APE+F+ ++YD +VDV+S +IL ++ G PF ++ E+ + + R P
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 233
Query: 385 FKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
F + L+++ P+KR T QI+
Sbjct: 234 FYMSTD-----CENLLKKFLILNPSKRGTLEQIM 262
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 125/277 (45%), Gaps = 53/277 (19%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAV--TQSSPMMIVTEYL 232
G VAVK L + + ++ E+ +L+ + H +++++ G ++ + +V EY+
Sbjct: 60 GEMVAVKALKAD--AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYV 117
Query: 233 PKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQND 292
P G LR +L R ++ + + FA I GM YLH IHRDL
Sbjct: 118 PLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAA----------- 162
Query: 293 RNILRDDSGNLKVADFGVSKLLT-------VKEDRPLTCQDTSCRYVAPEVFKNEEYDTK 345
RN+L D+ +K+ DFG++K + V+ED D+ + APE K ++
Sbjct: 163 RNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVRED-----GDSPVFWYAPECLKEYKFYYA 217
Query: 346 VDVFSFALILQEMIEGC-----PPFTMKHDNEVPKAY------------AARQRPPFKAP 388
DV+SF + L E++ C PP + + R P K P
Sbjct: 218 SDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCP 277
Query: 389 AKLYARGLKELIEECWNEKPAKRPTFRQIITRLESIN 425
A++Y L++ CW + + RPTF +I L++++
Sbjct: 278 AEVY-----HLMKNCWETEASFRPTFENLIPILKTVH 309
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 142/301 (47%), Gaps = 46/301 (15%)
Query: 144 EVPEYEIDPHELDFTNSVEITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRDE 200
E+P+ +I T I G+F + W G VAVK L + +++AF++E
Sbjct: 9 EIPDGQI-------TVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNE 59
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
+ +L+K RH N++ F+G T+ + IVT++ L L + + + A
Sbjct: 60 VGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 118
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
A+GM+YLH IIHRDL+ + NI + +K+ DFG L TVK
Sbjct: 119 AQGMDYLHAKS---IIHRDLKSN-----------NIFLHEDLTVKIGDFG---LATVKSR 161
Query: 320 RPLTCQ----DTSCRYVAPEVFKNEE---YDTKVDVFSFALILQEMIEGCPPFTMKHDNE 372
+ Q S ++APEV + ++ Y + DV++F ++L E++ G P++ ++ +
Sbjct: 162 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 221
Query: 373 -----VPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
V + Y + P + +K L+ EC +K +RP F QI+ +E + S
Sbjct: 222 QIIFMVGRGYLS---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 278
Query: 428 I 428
+
Sbjct: 279 L 279
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 142/301 (47%), Gaps = 46/301 (15%)
Query: 144 EVPEYEIDPHELDFTNSVEITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRDE 200
E+P+ +I T I G+F + W G VAVK L + +++AF++E
Sbjct: 6 EIPDGQI-------TVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNE 56
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
+ +L+K RH N++ F+G T+ + IVT++ L L + + + A
Sbjct: 57 VGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 115
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
A+GM+YLH IIHRDL+ + NI + +K+ DFG L TVK
Sbjct: 116 AQGMDYLHAKS---IIHRDLKSN-----------NIFLHEDLTVKIGDFG---LATVKSR 158
Query: 320 RPLTCQ----DTSCRYVAPEVFKNEE---YDTKVDVFSFALILQEMIEGCPPFTMKHDNE 372
+ Q S ++APEV + ++ Y + DV++F ++L E++ G P++ ++ +
Sbjct: 159 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 218
Query: 373 -----VPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
V + Y + P + +K L+ EC +K +RP F QI+ +E + S
Sbjct: 219 QIIFMVGRGYLS---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 275
Query: 428 I 428
+
Sbjct: 276 L 276
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 126/274 (45%), Gaps = 29/274 (10%)
Query: 152 PHELDFTNSVEITKGTFI---LA--FWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
PH ++ I KG F LA G +VAVK + + ++ + FR E+ +++
Sbjct: 11 PHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKV 69
Query: 207 IRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
+ HPN+V+ + + +V EY G++ +L G +K A I + Y
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD 326
H+ I+HRDL+ N+L D N+K+ADFG S T C
Sbjct: 130 HQK---FIVHRDLKAE-----------NLLLDADMNIKIADFGFSNEFTFGNKLDAFC-- 173
Query: 327 TSCRYVAPEVFKNEEYDT-KVDVFSFALILQEMIEGCPPFTMKHDNEV-PKAYAARQRPP 384
+ Y APE+F+ ++YD +VDV+S +IL ++ G PF ++ E+ + + R P
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 233
Query: 385 FKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
F + + L+++ P+KR T QI+
Sbjct: 234 F-----YMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 142/301 (47%), Gaps = 46/301 (15%)
Query: 144 EVPEYEIDPHELDFTNSVEITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRDE 200
E+P+ +I T I G+F + W G VAVK L + +++AF++E
Sbjct: 9 EIPDGQI-------TVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNE 59
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
+ +L+K RH N++ F+G T+ + IVT++ L L + + + A
Sbjct: 60 VGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 118
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
A+GM+YLH IIHRDL+ + NI + +K+ DFG L TVK
Sbjct: 119 AQGMDYLHAKS---IIHRDLKSN-----------NIFLHEDLTVKIGDFG---LATVKSR 161
Query: 320 RPLTCQ----DTSCRYVAPEVFKNEE---YDTKVDVFSFALILQEMIEGCPPFTMKHDNE 372
+ Q S ++APEV + ++ Y + DV++F ++L E++ G P++ ++ +
Sbjct: 162 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 221
Query: 373 -----VPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
V + Y + P + +K L+ EC +K +RP F QI+ +E + S
Sbjct: 222 QIIFMVGRGYLS---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 278
Query: 428 I 428
+
Sbjct: 279 L 279
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 140/292 (47%), Gaps = 51/292 (17%)
Query: 158 TNSVEITKGTFILAF---WRGI-------QVAVKKLGEEVISDDDRVRAFRDELALLQKI 207
T S E+ +G+F + + +G+ +VA+K + E S +R+ F +E +++++
Sbjct: 22 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-NEAASMRERIE-FLNEASVMKEF 79
Query: 208 RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKP-------------STAVR 254
+VV+ LG V+Q P +++ E + +GDL+++L+ +L+P S ++
Sbjct: 80 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR---SLRPEMENNPVLAPPSLSKMIQ 136
Query: 255 FALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-L 313
A +IA GM YL+ NK +HRDL RN + + +K+ DFG+++ +
Sbjct: 137 MAGEIADGMAYLNANK---FVHRDLAA-----------RNCMVAEDFTVKIGDFGMTRDI 182
Query: 314 LTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNE 372
R R+++PE K+ + T DV+SF ++L E+ P+ + +
Sbjct: 183 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 242
Query: 373 VPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLE 422
V + P P L+ EL+ CW P RP+F +II+ ++
Sbjct: 243 VLRFVMEGGLLDKPDNCPDMLF-----ELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 140/292 (47%), Gaps = 51/292 (17%)
Query: 158 TNSVEITKGTFILAF---WRGI-------QVAVKKLGEEVISDDDRVRAFRDELALLQKI 207
T S E+ +G+F + + +G+ +VA+K + E S +R+ F +E +++++
Sbjct: 15 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-NEAASMRERIE-FLNEASVMKEF 72
Query: 208 RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKP-------------STAVR 254
+VV+ LG V+Q P +++ E + +GDL+++L+ +L+P S ++
Sbjct: 73 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR---SLRPEMENNPVLAPPSLSKMIQ 129
Query: 255 FALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-L 313
A +IA GM YL+ NK +HRDL RN + + +K+ DFG+++ +
Sbjct: 130 MAGEIADGMAYLNANK---FVHRDLAA-----------RNCMVAEDFTVKIGDFGMTRDI 175
Query: 314 LTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNE 372
R R+++PE K+ + T DV+SF ++L E+ P+ + +
Sbjct: 176 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 235
Query: 373 VPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLE 422
V + P P L+ EL+ CW P RP+F +II+ ++
Sbjct: 236 VLRFVMEGGLLDKPDNCPDMLF-----ELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 140/292 (47%), Gaps = 51/292 (17%)
Query: 158 TNSVEITKGTFILAF---WRGI-------QVAVKKLGEEVISDDDRVRAFRDELALLQKI 207
T S E+ +G+F + + +G+ +VA+K + E S +R+ F +E +++++
Sbjct: 21 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIE-FLNEASVMKEF 78
Query: 208 RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKP-------------STAVR 254
+VV+ LG V+Q P +++ E + +GDL+++L+ +L+P S ++
Sbjct: 79 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR---SLRPEMENNPVLAPPSLSKMIQ 135
Query: 255 FALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-L 313
A +IA GM YL+ NK +HRDL RN + + +K+ DFG+++ +
Sbjct: 136 MAGEIADGMAYLNANK---FVHRDLAA-----------RNCMVAEDFTVKIGDFGMTRDI 181
Query: 314 LTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNE 372
R R+++PE K+ + T DV+SF ++L E+ P+ + +
Sbjct: 182 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 241
Query: 373 VPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLE 422
V + P P L+ EL+ CW P RP+F +II+ ++
Sbjct: 242 VLRFVMEGGLLDKPDNCPDMLF-----ELMRMCWQYNPKMRPSFLEIISSIK 288
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 142/301 (47%), Gaps = 46/301 (15%)
Query: 144 EVPEYEIDPHELDFTNSVEITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRDE 200
E+P+ +I T I G+F + W G VAVK L + +++AF++E
Sbjct: 4 EIPDGQI-------TVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNE 54
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
+ +L+K RH N++ F+G T+ + IVT++ L L + + + A
Sbjct: 55 VGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 113
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
A+GM+YLH IIHRDL+ + NI + +K+ DFG L TVK
Sbjct: 114 AQGMDYLHAKS---IIHRDLKSN-----------NIFLHEDLTVKIGDFG---LATVKSR 156
Query: 320 RPLTCQ----DTSCRYVAPEVFKNEE---YDTKVDVFSFALILQEMIEGCPPFTMKHDNE 372
+ Q S ++APEV + ++ Y + DV++F ++L E++ G P++ ++ +
Sbjct: 157 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 216
Query: 373 -----VPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
V + Y + P + +K L+ EC +K +RP F QI+ +E + S
Sbjct: 217 QIIFMVGRGYLS---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 273
Query: 428 I 428
+
Sbjct: 274 L 274
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 140/292 (47%), Gaps = 51/292 (17%)
Query: 158 TNSVEITKGTFILAF---WRGI-------QVAVKKLGEEVISDDDRVRAFRDELALLQKI 207
T S E+ +G+F + + +G+ +VA+K + E S +R+ F +E +++++
Sbjct: 19 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIE-FLNEASVMKEF 76
Query: 208 RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKP-------------STAVR 254
+VV+ LG V+Q P +++ E + +GDL+++L+ +L+P S ++
Sbjct: 77 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR---SLRPEMENNPVLAPPSLSKMIQ 133
Query: 255 FALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-L 313
A +IA GM YL+ NK +HRDL RN + + +K+ DFG+++ +
Sbjct: 134 MAGEIADGMAYLNANK---FVHRDLAA-----------RNCMVAEDFTVKIGDFGMTRDI 179
Query: 314 LTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNE 372
R R+++PE K+ + T DV+SF ++L E+ P+ + +
Sbjct: 180 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 239
Query: 373 VPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLE 422
V + P P L+ EL+ CW P RP+F +II+ ++
Sbjct: 240 VLRFVMEGGLLDKPDNCPDMLF-----ELMRMCWQYNPKMRPSFLEIISSIK 286
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 126/274 (45%), Gaps = 29/274 (10%)
Query: 152 PHELDFTNSVEITKGTFI---LA--FWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
PH ++ I KG F LA G +VA+K + + ++ + FR E+ +++
Sbjct: 12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKI 70
Query: 207 IRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
+ HPN+V+ + + ++ EY G++ +L G +K A I + Y
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYC 130
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD 326
H+ + I+HRDL+ N+L D N+K+ADFG S TV C
Sbjct: 131 HQKR---IVHRDLKAE-----------NLLLDADMNIKIADFGFSNEFTVGGKLDAFC-- 174
Query: 327 TSCRYVAPEVFKNEEYDT-KVDVFSFALILQEMIEGCPPFTMKHDNEV-PKAYAARQRPP 384
+ Y APE+F+ ++YD +VDV+S +IL ++ G PF ++ E+ + + R P
Sbjct: 175 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 234
Query: 385 FKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
F + + L++ P KR T QI+
Sbjct: 235 F-----YMSTDCENLLKRFLVLNPIKRGTLEQIM 263
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 124/273 (45%), Gaps = 54/273 (19%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQ-SSPMMIVTEYLPKG 235
VAVK L E + R A EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 60 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 236 DLRAFLKRK------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSD 283
+L +L+ K L + ++ +A+GM +L K IHRDL
Sbjct: 118 NLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRK---XIHRDLAA-- 172
Query: 284 LYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDR--------PLTCQDTSCRYVAPE 335
RNIL + +K+ DFG+++ + D PL +++APE
Sbjct: 173 ---------RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL-------KWMAPE 216
Query: 336 VFKNEEYDTKVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKAPAKL 391
+ Y + DV+SF ++L E+ G P+ +K D E + R R P ++
Sbjct: 217 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM 276
Query: 392 YARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
Y L +CW+ +P++RPTF +++ L ++
Sbjct: 277 YQTML-----DCWHGEPSQRPTFSELVEHLGNL 304
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 140/292 (47%), Gaps = 51/292 (17%)
Query: 158 TNSVEITKGTFILAF---WRGI-------QVAVKKLGEEVISDDDRVRAFRDELALLQKI 207
T S E+ +G+F + + +G+ +VA+K + E S +R+ F +E +++++
Sbjct: 21 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIE-FLNEASVMKEF 78
Query: 208 RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKP-------------STAVR 254
+VV+ LG V+Q P +++ E + +GDL+++L+ +L+P S ++
Sbjct: 79 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR---SLRPEMENNPVLAPPSLSKMIQ 135
Query: 255 FALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-L 313
A +IA GM YL+ NK +HRDL RN + + +K+ DFG+++ +
Sbjct: 136 MAGEIADGMAYLNANK---FVHRDLAA-----------RNCMVAEDFTVKIGDFGMTRDI 181
Query: 314 LTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNE 372
R R+++PE K+ + T DV+SF ++L E+ P+ + +
Sbjct: 182 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 241
Query: 373 VPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLE 422
V + P P L+ EL+ CW P RP+F +II+ ++
Sbjct: 242 VLRFVMEGGLLDKPDNCPDMLF-----ELMRMCWQYNPKMRPSFLEIISSIK 288
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 142/301 (47%), Gaps = 46/301 (15%)
Query: 144 EVPEYEIDPHELDFTNSVEITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRDE 200
E+P+ +I T I G+F + W G VAVK L + +++AF++E
Sbjct: 4 EIPDGQI-------TVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNE 54
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
+ +L+K RH N++ F+G T + + IVT++ L L + + + A
Sbjct: 55 VGVLRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 113
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
A+GM+YLH IIHRDL+ + NI + +K+ DFG L TVK
Sbjct: 114 AQGMDYLHAKS---IIHRDLKSN-----------NIFLHEDLTVKIGDFG---LATVKSR 156
Query: 320 RPLTCQ----DTSCRYVAPEVFKNEE---YDTKVDVFSFALILQEMIEGCPPFTMKHDNE 372
+ Q S ++APEV + ++ Y + DV++F ++L E++ G P++ ++ +
Sbjct: 157 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 216
Query: 373 -----VPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
V + Y + P + +K L+ EC +K +RP F QI+ +E + S
Sbjct: 217 QIIFMVGRGYLS---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 273
Query: 428 I 428
+
Sbjct: 274 L 274
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 122/268 (45%), Gaps = 42/268 (15%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQ-SSPMMIVTEYLPKG 235
VAVK L E + R A EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 62 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 236 DLRAFLKRK--------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEP 281
+L +L+ K L + ++ +A+GM +L K IHRDL
Sbjct: 120 NLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRK---XIHRDLAA 176
Query: 282 SDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD-TSCRYVAPEVFKNE 340
RNIL + +K+ DFG+++ + D +++APE +
Sbjct: 177 -----------RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDR 225
Query: 341 EYDTKVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKAPAKLYARGL 396
Y + DV+SF ++L E+ G P+ +K D E + R R P ++Y L
Sbjct: 226 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML 285
Query: 397 KELIEECWNEKPAKRPTFRQIITRLESI 424
+CW+ +P++RPTF +++ L ++
Sbjct: 286 -----DCWHGEPSQRPTFSELVEHLGNL 308
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 124/276 (44%), Gaps = 57/276 (20%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQ-SSPMMIVTEYLPKG 235
VAVK L E + R A EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 61 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 118
Query: 236 DLRAFLKRK---------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
+L +L+ K L + ++ +A+GM +L K IHRDL
Sbjct: 119 NLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLA 175
Query: 281 PSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDR--------PLTCQDTSCRYV 332
RNIL + +K+ DFG+++ + D PL +++
Sbjct: 176 A-----------RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL-------KWM 217
Query: 333 APEVFKNEEYDTKVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKAP 388
APE + Y + DV+SF ++L E+ G P+ +K D E + R R P
Sbjct: 218 APETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTT 277
Query: 389 AKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++Y L +CW+ +P++RPTF +++ L ++
Sbjct: 278 PEMYQTML-----DCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 131/286 (45%), Gaps = 31/286 (10%)
Query: 150 IDPHELDFTNSV-EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIR 208
ID +L+F + E G W+G + VK L S + R F +E L+
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTR-KSRDFNEECPRLRIFS 65
Query: 209 HPNVVQFLGAVTQSSPM---MIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGM 263
HPNV+ LGA QS P ++T ++P G L L + S AV+FALD+ARGM
Sbjct: 66 HPNVLPVLGAC-QSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGM 124
Query: 264 NYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLT 323
+LH LEP L + N R+++ D+ +++ + VK
Sbjct: 125 AFLHT----------LEP--LIPRHALNSRSVMIDEDMTARIS------MADVKFSFQSP 166
Query: 324 CQDTSCRYVAPEVFKNEEYDT---KVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAAR 380
+ + +VAPE + + DT D++SFA++L E++ PF + E+ A
Sbjct: 167 GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALE 226
Query: 381 QRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINN 426
P P + + +L++ C NE PAKRP F I+ LE + +
Sbjct: 227 GLRPTIPPG--ISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 139/291 (47%), Gaps = 51/291 (17%)
Query: 158 TNSVEITKGTFILAF---WRGI-------QVAVKKLGEEVISDDDRVRAFRDELALLQKI 207
T S E+ +G+F + + +G+ +VA+K + E S +R+ F +E +++++
Sbjct: 28 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE-AASMRERIE-FLNEASVMKEF 85
Query: 208 RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKP-------------STAVR 254
+VV+ LG V+Q P +++ E + +GDL+++L+ +L+P S ++
Sbjct: 86 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR---SLRPEMENNPVLAPPSLSKMIQ 142
Query: 255 FALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK-L 313
A +IA GM YL+ NK +HRDL RN + + +K+ DFG+++ +
Sbjct: 143 MAGEIADGMAYLNANK---FVHRDLAA-----------RNCMVAEDFTVKIGDFGMTRDI 188
Query: 314 LTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNE 372
R R+++PE K+ + T DV+SF ++L E+ P+ + +
Sbjct: 189 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 248
Query: 373 VPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRL 421
V + P P L+ EL+ CW P RP+F +II+ +
Sbjct: 249 VLRFVMEGGLLDKPDNCPDMLF-----ELMRMCWQYNPKMRPSFLEIISSI 294
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 118/274 (43%), Gaps = 61/274 (22%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VAVK L EE + D F+ E AL+ + +PN+V+ LG PM ++ EY+ GDL
Sbjct: 80 VAVKMLKEE--ASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDL 137
Query: 238 RAFLKRKGALKPSTAVRF---------------------------ALDIARGMNYLHENK 270
FL+ ++ P T A +A GM YL E K
Sbjct: 138 NEFLR---SMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK 194
Query: 271 PVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT-SC 329
+HRDL RN L ++ +K+ADFG+S+ + + D
Sbjct: 195 ---FVHRDLA-----------TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPI 240
Query: 330 RYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPP-FTMKHDNEVPKAYAARQ----RP 383
R++ PE Y T+ DV+++ ++L E+ G P + M H+ + Y R
Sbjct: 241 RWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVI---YYVRDGNILAC 297
Query: 384 PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 417
P P +LY L+ CW++ PA RP+F I
Sbjct: 298 PENCPLELY-----NLMRLCWSKLPADRPSFCSI 326
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 125/274 (45%), Gaps = 29/274 (10%)
Query: 152 PHELDFTNSVEITKGTFI---LA--FWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
PH ++ I KG F LA G +VAV+ + + ++ + FR E+ +++
Sbjct: 11 PHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKV 69
Query: 207 IRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
+ HPN+V+ + + +V EY G++ +L G +K A I + Y
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD 326
H+ I+HRDL+ N+L D N+K+ADFG S T C
Sbjct: 130 HQK---FIVHRDLKAE-----------NLLLDADMNIKIADFGFSNEFTFGNKLDEFC-- 173
Query: 327 TSCRYVAPEVFKNEEYDT-KVDVFSFALILQEMIEGCPPFTMKHDNEV-PKAYAARQRPP 384
S Y APE+F+ ++YD +VDV+S +IL ++ G PF ++ E+ + + R P
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 233
Query: 385 FKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
F + L+++ P+KR T QI+
Sbjct: 234 FYMSTD-----CENLLKKFLILNPSKRGTLEQIM 262
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 139/293 (47%), Gaps = 51/293 (17%)
Query: 157 FTNSVEITKGTFILAF---WRGI-------QVAVKKLGEEVISDDDRVRAFRDELALLQK 206
T S E+ +G+F + + +G+ +VA+K + E S +R+ F +E +++++
Sbjct: 12 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIE-FLNEASVMKE 69
Query: 207 IRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKP-------------STAV 253
+VV+ LG V+Q P +++ E + +GDL+++L+ +L+P S +
Sbjct: 70 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR---SLRPEMENNPVLAPPSLSKMI 126
Query: 254 RFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK- 312
+ A +IA GM YL+ NK +HRDL RN + + +K+ DFG+++
Sbjct: 127 QMAGEIADGMAYLNANK---FVHRDLAA-----------RNCMVAEDFTVKIGDFGMTRD 172
Query: 313 LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDN 371
+ R R+++PE K+ + T DV+SF ++L E+ P+ +
Sbjct: 173 IXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 232
Query: 372 EVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLE 422
+V + P P L EL+ CW P RP+F +II+ ++
Sbjct: 233 QVLRFVMEGGLLDKPDNCPDMLL-----ELMRMCWQYNPKMRPSFLEIISSIK 280
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 135/294 (45%), Gaps = 40/294 (13%)
Query: 144 EVPEYEIDPHELDFTNSVEITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRDE 200
E+P+ +I T I G+F + W G VAVK L + +++AF++E
Sbjct: 20 EIPDGQI-------TVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNE 70
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFL-KRKGALKPSTAVRFALDI 259
+ +L+K RH N++ F+G T+ + IVT++ L L + + + A
Sbjct: 71 VGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQT 129
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
ARGM+YLH IIHRDL+ + NI + +K+ DFG L T K
Sbjct: 130 ARGMDYLHAKS---IIHRDLKSN-----------NIFLHEDNTVKIGDFG---LATEKSR 172
Query: 320 RPLTCQ----DTSCRYVAPEVFKNEE---YDTKVDVFSFALILQEMIEGCPPFT--MKHD 370
+ Q S ++APEV + ++ Y + DV++F ++L E++ G P++ D
Sbjct: 173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 232
Query: 371 NEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+ P + +K L+ EC +K +RP+F +I+ +E +
Sbjct: 233 QIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 113/241 (46%), Gaps = 24/241 (9%)
Query: 152 PHELDFTNSVEITKGTFI---LA--FWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
PH ++ I KG F LA G +VAVK + + ++ + FR E+ +++
Sbjct: 12 PHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR-EVRIMKI 70
Query: 207 IRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
+ HPN+V+ + + +V EY G++ +L G +K A I + Y
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC 130
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD 326
H+ I+HRDL+ N+L D N+K+ADFG S TV C
Sbjct: 131 HQKY---IVHRDLKAE-----------NLLLDGDMNIKIADFGFSNEFTVGNKLDTFC-- 174
Query: 327 TSCRYVAPEVFKNEEYDT-KVDVFSFALILQEMIEGCPPFTMKHDNEV-PKAYAARQRPP 384
S Y APE+F+ ++YD +VDV+S +IL ++ G PF ++ E+ + + R P
Sbjct: 175 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 234
Query: 385 F 385
F
Sbjct: 235 F 235
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 124/277 (44%), Gaps = 58/277 (20%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQ-SSPMMIVTEYLPKG 235
VAVK L E + R A EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 51 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 108
Query: 236 DLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDL 279
+L +L+ K L + ++ +A+GM +L K IHRDL
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 165
Query: 280 EPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDR--------PLTCQDTSCRY 331
RNIL + +K+ DFG+++ + D PL ++
Sbjct: 166 AA-----------RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL-------KW 207
Query: 332 VAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKA 387
+APE + Y + DV+SF ++L E+ G P+ +K D E + R R P
Sbjct: 208 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYT 267
Query: 388 PAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++Y L +CW+ +P++RPTF +++ L ++
Sbjct: 268 TPEMYQTML-----DCWHGEPSQRPTFSELVEHLGNL 299
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 124/277 (44%), Gaps = 58/277 (20%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQ-SSPMMIVTEYLPKG 235
VAVK L E + R A EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 60 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 236 DLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDL 279
+L +L+ K L + ++ +A+GM +L K IHRDL
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 174
Query: 280 EPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDR--------PLTCQDTSCRY 331
RNIL + +K+ DFG+++ + D PL ++
Sbjct: 175 AA-----------RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL-------KW 216
Query: 332 VAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKA 387
+APE + Y + DV+SF ++L E+ G P+ +K D E + R R P
Sbjct: 217 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYT 276
Query: 388 PAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++Y L +CW+ +P++RPTF +++ L ++
Sbjct: 277 TPEMYQTML-----DCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 135/294 (45%), Gaps = 40/294 (13%)
Query: 144 EVPEYEIDPHELDFTNSVEITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRDE 200
E+P+ +I T I G+F + W G VAVK L + +++AF++E
Sbjct: 20 EIPDGQI-------TVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNE 70
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFL-KRKGALKPSTAVRFALDI 259
+ +L+K RH N++ F+G T + + IVT++ L L + + + A
Sbjct: 71 VGVLRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQT 129
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
ARGM+YLH IIHRDL+ + NI + +K+ DFG L T K
Sbjct: 130 ARGMDYLHAKS---IIHRDLKSN-----------NIFLHEDNTVKIGDFG---LATEKSR 172
Query: 320 RPLTCQ----DTSCRYVAPEVFKNEE---YDTKVDVFSFALILQEMIEGCPPFT--MKHD 370
+ Q S ++APEV + ++ Y + DV++F ++L E++ G P++ D
Sbjct: 173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 232
Query: 371 NEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+ P + +K L+ EC +K +RP+F +I+ +E +
Sbjct: 233 QIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 124/277 (44%), Gaps = 58/277 (20%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQ-SSPMMIVTEYLPKG 235
VAVK L E + R A EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 60 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 236 DLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDL 279
+L +L+ K L + ++ +A+GM +L K IHRDL
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 174
Query: 280 EPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDR--------PLTCQDTSCRY 331
RNIL + +K+ DFG+++ + D PL ++
Sbjct: 175 AA-----------RNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPL-------KW 216
Query: 332 VAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKA 387
+APE + Y + DV+SF ++L E+ G P+ +K D E + R R P
Sbjct: 217 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYT 276
Query: 388 PAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++Y L +CW+ +P++RPTF +++ L ++
Sbjct: 277 TPEMYQTML-----DCWHGEPSQRPTFSELVEHLGNL 308
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 124/277 (44%), Gaps = 58/277 (20%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQ-SSPMMIVTEYLPKG 235
VAVK L E + R A EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 60 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 236 DLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDL 279
+L +L+ K L + ++ +A+GM +L K IHRDL
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 174
Query: 280 EPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDR--------PLTCQDTSCRY 331
RNIL + +K+ DFG+++ + D PL ++
Sbjct: 175 AA-----------RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL-------KW 216
Query: 332 VAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKA 387
+APE + Y + DV+SF ++L E+ G P+ +K D E + R R P
Sbjct: 217 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYT 276
Query: 388 PAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++Y L +CW+ +P++RPTF +++ L ++
Sbjct: 277 TPEMYQTML-----DCWHGEPSQRPTFSELVEHLGNL 308
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 124/277 (44%), Gaps = 58/277 (20%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQ-SSPMMIVTEYLPKG 235
VAVK L E + R A EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 97 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 154
Query: 236 DLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDL 279
+L +L+ K L + ++ +A+GM +L K IHRDL
Sbjct: 155 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 211
Query: 280 EPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDR--------PLTCQDTSCRY 331
RNIL + +K+ DFG+++ + D PL ++
Sbjct: 212 AA-----------RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL-------KW 253
Query: 332 VAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKA 387
+APE + Y + DV+SF ++L E+ G P+ +K D E + R R P
Sbjct: 254 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYT 313
Query: 388 PAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++Y L +CW+ +P++RPTF +++ L ++
Sbjct: 314 TPEMYQTML-----DCWHGEPSQRPTFSELVEHLGNL 345
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 124/277 (44%), Gaps = 58/277 (20%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQ-SSPMMIVTEYLPKG 235
VAVK L E + R A EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 62 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 236 DLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDL 279
+L +L+ K L + ++ +A+GM +L K IHRDL
Sbjct: 120 NLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 176
Query: 280 EPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDR--------PLTCQDTSCRY 331
RNIL + +K+ DFG+++ + D PL ++
Sbjct: 177 AA-----------RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL-------KW 218
Query: 332 VAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKA 387
+APE + Y + DV+SF ++L E+ G P+ +K D E + R R P
Sbjct: 219 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYT 278
Query: 388 PAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
++Y L +CW+ +P++RPTF +++ L ++
Sbjct: 279 TPEMYQTML-----DCWHGEPSQRPTFSELVEHLGNL 310
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 126/276 (45%), Gaps = 30/276 (10%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G + AVK + + + + E+ LL+++ HPN+++ +V E
Sbjct: 51 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 110
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G+L + + A R + G+ Y+H+NK I+HRDL+P +L + D N
Sbjct: 111 GELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDAN 167
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
I ++ DFG+S + + + + + Y+APEV YD K DV+S +I
Sbjct: 168 I--------RIIDFGLSTHF--EASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVI 216
Query: 355 LQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPA-KLYARGLKELIEECWNEKPAKRPT 413
L ++ GCPPF ++ ++ K + + F+ P K + K+LI + P+ R +
Sbjct: 217 LYILLSGCPPFNGANEYDILKK-VEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRIS 275
Query: 414 FR--------------QIITRLESINNSINHKRRWK 435
R QI + S++N+I + R+++
Sbjct: 276 ARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQ 311
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 126/276 (45%), Gaps = 30/276 (10%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G + AVK + + + + E+ LL+++ HPN+++ +V E
Sbjct: 74 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 133
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G+L + + A R + G+ Y+H+NK I+HRDL+P +L + D N
Sbjct: 134 GELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDAN 190
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
I ++ DFG+S + + + + + Y+APEV YD K DV+S +I
Sbjct: 191 I--------RIIDFGLSTHF--EASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVI 239
Query: 355 LQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPA-KLYARGLKELIEECWNEKPAKRPT 413
L ++ GCPPF ++ ++ K + + F+ P K + K+LI + P+ R +
Sbjct: 240 LYILLSGCPPFNGANEYDILKK-VEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRIS 298
Query: 414 FR--------------QIITRLESINNSINHKRRWK 435
R QI + S++N+I + R+++
Sbjct: 299 ARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQ 334
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 20/223 (8%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
EL +L + P +V F GA + I E++ G L LK+ G + + ++ +
Sbjct: 73 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 132
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+G+ YL E I+HRD++PS NIL + G +K+ DFGVS L D
Sbjct: 133 IKGLTYLREKH--KIMHRDVKPS-----------NILVNSRGEIKLCDFGVSGQLI---D 176
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKA--- 376
+ Y++PE + Y + D++S L L EM G P +
Sbjct: 177 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLD 236
Query: 377 YAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIIT 419
Y + PP K P+ +++ ++ + +C + PA+R +Q++
Sbjct: 237 YIVNEPPP-KLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 278
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 126/276 (45%), Gaps = 30/276 (10%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G + AVK + + + + E+ LL+++ HPN+++ +V E
Sbjct: 75 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 134
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G+L + + A R + G+ Y+H+NK I+HRDL+P +L + D N
Sbjct: 135 GELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDAN 191
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
I ++ DFG+S + + + + + Y+APEV YD K DV+S +I
Sbjct: 192 I--------RIIDFGLSTHF--EASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVI 240
Query: 355 LQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPA-KLYARGLKELIEECWNEKPAKRPT 413
L ++ GCPPF ++ ++ K + + F+ P K + K+LI + P+ R +
Sbjct: 241 LYILLSGCPPFNGANEYDILKK-VEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRIS 299
Query: 414 FR--------------QIITRLESINNSINHKRRWK 435
R QI + S++N+I + R+++
Sbjct: 300 ARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQ 335
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 112/257 (43%), Gaps = 35/257 (13%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 35 QSKFILALKVLFKTQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 86
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P
Sbjct: 87 VYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR---VIHRDIKPE-- 141
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR---YVAPEVFKNEE 341
N+L +G LK+ADFG S P + +DT C Y+ PE+ +
Sbjct: 142 ---------NLLLGSNGELKIADFGWSV------HAPSSRRDTLCGTLDYLPPEMIEGRM 186
Query: 342 YDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 401
+D KVD++S ++ E + G PPF E Y R F P G ++LI
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQET---YRRISRVEFTFP-DFVTEGARDLIS 242
Query: 402 ECWNEKPAKRPTFRQII 418
++R T +++
Sbjct: 243 RLLKHNASQRLTLAEVL 259
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 141/301 (46%), Gaps = 46/301 (15%)
Query: 144 EVPEYEIDPHELDFTNSVEITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRDE 200
E+P+ +I T I G+F + W G VAVK L + +++AF++E
Sbjct: 32 EIPDGQI-------TVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNE 82
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
+ +L+K RH N++ F+G T+ + IVT++ L L + + + A
Sbjct: 83 VGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 141
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
A+GM+YLH IIHRDL+ + NI + +K+ DFG L T K
Sbjct: 142 AQGMDYLHAKS---IIHRDLKSN-----------NIFLHEDLTVKIGDFG---LATEKSR 184
Query: 320 RPLTCQ----DTSCRYVAPEVFKNEE---YDTKVDVFSFALILQEMIEGCPPFTMKHDNE 372
+ Q S ++APEV + ++ Y + DV++F ++L E++ G P++ ++ +
Sbjct: 185 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 244
Query: 373 -----VPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
V + Y + P + +K L+ EC +K +RP F QI+ +E + S
Sbjct: 245 QIIFMVGRGYLS---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 301
Query: 428 I 428
+
Sbjct: 302 L 302
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 141/301 (46%), Gaps = 46/301 (15%)
Query: 144 EVPEYEIDPHELDFTNSVEITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRDE 200
E+P+ +I T I G+F + W G VAVK L + +++AF++E
Sbjct: 24 EIPDGQI-------TVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNE 74
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
+ +L+K RH N++ F+G T+ + IVT++ L L + + + A
Sbjct: 75 VGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 133
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
A+GM+YLH IIHRDL+ + NI + +K+ DFG L T K
Sbjct: 134 AQGMDYLHAKS---IIHRDLKSN-----------NIFLHEDLTVKIGDFG---LATEKSR 176
Query: 320 RPLTCQ----DTSCRYVAPEVFKNEE---YDTKVDVFSFALILQEMIEGCPPFTMKHDNE 372
+ Q S ++APEV + ++ Y + DV++F ++L E++ G P++ ++ +
Sbjct: 177 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 236
Query: 373 -----VPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
V + Y + P + +K L+ EC +K +RP F QI+ +E + S
Sbjct: 237 QIIFMVGRGYLS---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 293
Query: 428 I 428
+
Sbjct: 294 L 294
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 139/293 (47%), Gaps = 51/293 (17%)
Query: 157 FTNSVEITKGTFILAF---WRGI-------QVAVKKLGEEVISDDDRVRAFRDELALLQK 206
T S E+ +G+F + + +G+ +VA+K + E S +R+ F +E +++++
Sbjct: 14 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIE-FLNEASVMKE 71
Query: 207 IRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKP-------------STAV 253
+VV+ LG V+Q P +++ E + +GDL+++L+ +L+P S +
Sbjct: 72 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR---SLRPEMENNPVLAPPSLSKMI 128
Query: 254 RFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK- 312
+ A +IA GM YL+ NK +HRDL + VA + +K+ DFG+++
Sbjct: 129 QMAGEIADGMAYLNANK---FVHRDLAARNCXVA-----------EDFTVKIGDFGMTRD 174
Query: 313 LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDN 371
+ R R+++PE K+ + T DV+SF ++L E+ P+ +
Sbjct: 175 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 234
Query: 372 EVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLE 422
+V + P P L EL+ CW P RP+F +II+ ++
Sbjct: 235 QVLRFVMEGGLLDKPDNCPDMLL-----ELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 109/248 (43%), Gaps = 27/248 (10%)
Query: 174 RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ + VAVK L +V+S + + F E+ + + H N+++ G V + PM +VTE P
Sbjct: 35 KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAP 93
Query: 234 KGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQND 292
G L L K +G T R+A+ +A GM YL + IHRDL
Sbjct: 94 LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAA----------- 139
Query: 293 RNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSC--RYVAPEVFKNEEYDTKVDVFS 350
RN+L +K+ DFG+ + L +D + + + APE K + D +
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 199
Query: 351 FALILQEMIE-GCPPFTMKHDNEVPKAY---AARQRPPFKAPAKLYARGLKELIEECWNE 406
F + L EM G P+ + +++ R P P +Y ++ +CW
Sbjct: 200 FGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY-----NVMVQCWAH 254
Query: 407 KPAKRPTF 414
KP RPTF
Sbjct: 255 KPEDRPTF 262
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 122/229 (53%), Gaps = 24/229 (10%)
Query: 162 EITKGTFILAF----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLG 217
++ +GT+ + + +G VA+K++ + + A R E++LL+++ HPN+V +
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR-EISLLKELHHPNIVSLID 86
Query: 218 AVTQSSPMMIVTEYLPKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
+ + +V E++ K DL+ L + K L+ S + + RG+ + H+++ I+H
Sbjct: 87 VIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR---ILH 142
Query: 277 RDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEV 336
RDL+P +N+L + G LK+ADFG+++ + R T + + Y AP+V
Sbjct: 143 RDLKP-----------QNLLINSDGALKLADFGLARAFGIPV-RSYTHEVVTLWYRAPDV 190
Query: 337 F-KNEEYDTKVDVFSFALILQEMIEGCPPF-TMKHDNEVPKAYAARQRP 383
+++Y T VD++S I EMI G P F + D+++PK ++ P
Sbjct: 191 LMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP 239
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 122/229 (53%), Gaps = 24/229 (10%)
Query: 162 EITKGTFILAF----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLG 217
++ +GT+ + + +G VA+K++ + + A R E++LL+++ HPN+V +
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR-EISLLKELHHPNIVSLID 86
Query: 218 AVTQSSPMMIVTEYLPKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
+ + +V E++ K DL+ L + K L+ S + + RG+ + H+++ I+H
Sbjct: 87 VIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR---ILH 142
Query: 277 RDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEV 336
RDL+P +N+L + G LK+ADFG+++ + R T + + Y AP+V
Sbjct: 143 RDLKP-----------QNLLINSDGALKLADFGLARAFGIPV-RSYTHEVVTLWYRAPDV 190
Query: 337 F-KNEEYDTKVDVFSFALILQEMIEGCPPF-TMKHDNEVPKAYAARQRP 383
+++Y T VD++S I EMI G P F + D+++PK ++ P
Sbjct: 191 LMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP 239
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 119/238 (50%), Gaps = 24/238 (10%)
Query: 186 EVISDDDRVRAFR---DELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK 242
+VI D ++F+ D + + + H ++V+ LG SS + +VT+YLP G L ++
Sbjct: 48 KVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSS-LQLVTQYLPLGSLLDHVR 106
Query: 243 R-KGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSG 301
+ +GAL P + + + IA+GM YL E+ ++HR+L RN+L
Sbjct: 107 QHRGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAA-----------RNVLLKSPS 152
Query: 302 NLKVADFGVSKLLTVKEDRPLTCQ-DTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE 360
++VADFGV+ LL + + L + T +++A E +Y + DV+S+ + + E++
Sbjct: 153 QVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
Query: 361 -GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 417
G P+ EVP +R A ++ + ++ +CW RPTF+++
Sbjct: 213 FGAEPYAGLRLAEVPDLLEKGER---LAQPQICTIDVYMVMVKCWMIDENIRPTFKEL 267
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 108/246 (43%), Gaps = 27/246 (10%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+ VAVK L +V+S + + F E+ + + H N+++ G V + PM +VTE P G
Sbjct: 47 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLG 105
Query: 236 DLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L L K +G T R+A+ +A GM YL + IHRDL RN
Sbjct: 106 SLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAA-----------RN 151
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSC--RYVAPEVFKNEEYDTKVDVFSFA 352
+L +K+ DFG+ + L +D + + + APE K + D + F
Sbjct: 152 LLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 211
Query: 353 LILQEMIE-GCPPFTMKHDNEVPKAY---AARQRPPFKAPAKLYARGLKELIEECWNEKP 408
+ L EM G P+ + +++ R P P +Y ++ +CW KP
Sbjct: 212 VTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY-----NVMVQCWAHKP 266
Query: 409 AKRPTF 414
RPTF
Sbjct: 267 EDRPTF 272
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 141/301 (46%), Gaps = 46/301 (15%)
Query: 144 EVPEYEIDPHELDFTNSVEITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRDE 200
E+P+ +I T I G+F + W G VAVK L + +++AF++E
Sbjct: 4 EIPDGQI-------TVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNE 54
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
+ +L+K RH N++ F+G T+ + IVT++ L L + + + A
Sbjct: 55 VGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 113
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
A+GM+YLH IIHRDL+ + NI + +K+ DFG L T K
Sbjct: 114 AQGMDYLHAKS---IIHRDLKSN-----------NIFLHEDLTVKIGDFG---LATEKSR 156
Query: 320 RPLTCQ----DTSCRYVAPEVFKNEE---YDTKVDVFSFALILQEMIEGCPPFTMKHDNE 372
+ Q S ++APEV + ++ Y + DV++F ++L E++ G P++ ++ +
Sbjct: 157 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 216
Query: 373 -----VPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
V + Y + P + +K L+ EC +K +RP F QI+ +E + S
Sbjct: 217 QIIFMVGRGYLS---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 273
Query: 428 I 428
+
Sbjct: 274 L 274
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 95/191 (49%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
GD+ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 126 GDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 171
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G +KVADFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 172 LLIDQQGYIKVADFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 122/273 (44%), Gaps = 29/273 (10%)
Query: 152 PHELDFTNSVEITKGTFI---LA--FWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
PH ++ I KG F LA G +VAVK + + ++ + FR E+ + +
Sbjct: 11 PHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKV 69
Query: 207 IRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
+ HPN+V+ + + +V EY G++ +L G K A I + Y
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYC 129
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD 326
H+ I+HRDL+ N+L D N+K+ADFG S T C
Sbjct: 130 HQK---FIVHRDLKAE-----------NLLLDADXNIKIADFGFSNEFTFGNKLDAFC-- 173
Query: 327 TSCRYVAPEVFKNEEYDT-KVDVFSFALILQEMIEGCPPFTMKHDNEV-PKAYAARQRPP 384
+ Y APE+F+ ++YD +VDV+S +IL ++ G PF ++ E+ + + R P
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 233
Query: 385 FKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 417
F + L+++ P+KR T QI
Sbjct: 234 FYXSTD-----CENLLKKFLILNPSKRGTLEQI 261
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 95/191 (49%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
GD+ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 126 GDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPE-----------N 171
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G +KVADFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 172 LLIDQQGYIKVADFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 112/242 (46%), Gaps = 16/242 (6%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G + AVK + + + + E+ LL+++ HPN+++ +V E
Sbjct: 57 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 116
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G+L + + A R + G+ Y+H+NK I+HRDL+P +L + D N
Sbjct: 117 GELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDAN 173
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
I ++ DFG+S + + + + + Y+APEV YD K DV+S +I
Sbjct: 174 I--------RIIDFGLSTHF--EASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVI 222
Query: 355 LQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPA-KLYARGLKELIEECWNEKPAKRPT 413
L ++ GCPPF ++ ++ K + + F+ P K + K+LI + P+ R +
Sbjct: 223 LYILLSGCPPFNGANEYDILKK-VEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRIS 281
Query: 414 FR 415
R
Sbjct: 282 AR 283
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 121/242 (50%), Gaps = 30/242 (12%)
Query: 143 REVPEYEIDPHEL-DFTNSVEITKGTF---ILAFWRGIQ--VAVKKLGEEVISDDDRVRA 196
R+ P +D +L DF + + KG+F +LA +G + A+K L ++V+ DD V
Sbjct: 6 RKQPSNNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVEC 65
Query: 197 FRDE---LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAV 253
E LALL K P + Q + V EY+ GDL +++ G K AV
Sbjct: 66 TMVEKRVLALLDK--PPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAV 123
Query: 254 RFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK- 312
+A +I+ G+ +LH+ II+RDL+ N++ D G++K+ADFG+ K
Sbjct: 124 FYAAEISIGLFFLHKRG---IIYRDLKLD-----------NVMLDSEGHIKIADFGMCKE 169
Query: 313 -LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDN 371
++ R + Y+APE+ + Y VD +++ ++L EM+ G PPF + ++
Sbjct: 170 HMMDGVTTREFC---GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED 226
Query: 372 EV 373
E+
Sbjct: 227 EL 228
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 119/238 (50%), Gaps = 24/238 (10%)
Query: 186 EVISDDDRVRAFR---DELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK 242
+VI D ++F+ D + + + H ++V+ LG SS + +VT+YLP G L ++
Sbjct: 66 KVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSS-LQLVTQYLPLGSLLDHVR 124
Query: 243 R-KGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSG 301
+ +GAL P + + + IA+GM YL E+ ++HR+L RN+L
Sbjct: 125 QHRGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAA-----------RNVLLKSPS 170
Query: 302 NLKVADFGVSKLLTVKEDRPLTCQ-DTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE 360
++VADFGV+ LL + + L + T +++A E +Y + DV+S+ + + E++
Sbjct: 171 QVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
Query: 361 -GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 417
G P+ EVP +R A ++ + ++ +CW RPTF+++
Sbjct: 231 FGAEPYAGLRLAEVPDLLEKGER---LAQPQICTIDVYMVMVKCWMIDENIRPTFKEL 285
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 108/246 (43%), Gaps = 27/246 (10%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+ VAVK L +V+S + + F E+ + + H N+++ G V + PM +VTE P G
Sbjct: 41 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLG 99
Query: 236 DLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L L K +G T R+A+ +A GM YL + IHRDL RN
Sbjct: 100 SLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAA-----------RN 145
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSC--RYVAPEVFKNEEYDTKVDVFSFA 352
+L +K+ DFG+ + L +D + + + APE K + D + F
Sbjct: 146 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 205
Query: 353 LILQEMIE-GCPPFTMKHDNEVPKAY---AARQRPPFKAPAKLYARGLKELIEECWNEKP 408
+ L EM G P+ + +++ R P P +Y ++ +CW KP
Sbjct: 206 VTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY-----NVMVQCWAHKP 260
Query: 409 AKRPTF 414
RPTF
Sbjct: 261 EDRPTF 266
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 108/246 (43%), Gaps = 27/246 (10%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+ VAVK L +V+S + + F E+ + + H N+++ G V + PM +VTE P G
Sbjct: 41 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLG 99
Query: 236 DLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L L K +G T R+A+ +A GM YL + IHRDL RN
Sbjct: 100 SLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAA-----------RN 145
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSC--RYVAPEVFKNEEYDTKVDVFSFA 352
+L +K+ DFG+ + L +D + + + APE K + D + F
Sbjct: 146 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 205
Query: 353 LILQEMIE-GCPPFTMKHDNEVPKAY---AARQRPPFKAPAKLYARGLKELIEECWNEKP 408
+ L EM G P+ + +++ R P P +Y ++ +CW KP
Sbjct: 206 VTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY-----NVMVQCWAHKP 260
Query: 409 AKRPTF 414
RPTF
Sbjct: 261 EDRPTF 266
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 109/248 (43%), Gaps = 27/248 (10%)
Query: 174 RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ + VAVK L +V+S + + F E+ + + H N+++ G V + PM +VTE P
Sbjct: 35 KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAP 93
Query: 234 KGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQND 292
G L L K +G T R+A+ +A GM YL + IHRDL
Sbjct: 94 LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAA----------- 139
Query: 293 RNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSC--RYVAPEVFKNEEYDTKVDVFS 350
RN+L +K+ DFG+ + L +D + + + APE K + D +
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 199
Query: 351 FALILQEMIE-GCPPFTMKHDNEVPKAY---AARQRPPFKAPAKLYARGLKELIEECWNE 406
F + L EM G P+ + +++ R P P +Y ++ +CW
Sbjct: 200 FGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY-----NVMVQCWAH 254
Query: 407 KPAKRPTF 414
KP RPTF
Sbjct: 255 KPEDRPTF 262
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 17/243 (6%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ AVK + + + D R E+ LL+K+ HPN+++ + SS IV E G+
Sbjct: 49 EYAVKVINKASAKNKDTSTILR-EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGE 107
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
L + ++ A R + G+ Y+H++ I+HRDL+P ++ + + D +I
Sbjct: 108 LFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDI- 163
Query: 297 RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQ 356
K+ DFG+S +++ + + + Y+APEV + YD K DV+S +IL
Sbjct: 164 -------KIIDFGLSTCF--QQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILY 213
Query: 357 EMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPA-KLYARGLKELIEECWNEKPAKRPTFR 415
++ G PPF K++ ++ K + F P + + K+LI + P+ R T
Sbjct: 214 ILLSGTPPFYGKNEYDILKR-VETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITAT 272
Query: 416 QII 418
Q +
Sbjct: 273 QCL 275
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 24/223 (10%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
EL +L + P +V F GA + I E++ G L LK+ G + + ++ +
Sbjct: 57 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 116
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+G+ YL E I+HRD++PS NIL + G +K+ DFGVS L +
Sbjct: 117 IKGLTYLREKH--KIMHRDVKPS-----------NILVNSRGEIKLCDFGVSGQLIDEMA 163
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEG---CPPFTMKHDNEVPKA 376
+ Y++PE + Y + D++S L L EM G PP + +
Sbjct: 164 NEFVGTRS---YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLD---- 216
Query: 377 YAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIIT 419
Y + PP K P+ +++ ++ + +C + PA+R +Q++
Sbjct: 217 YIVNEPPP-KLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMV 258
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 109/248 (43%), Gaps = 27/248 (10%)
Query: 174 RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ + VAVK L +V+S + + F E+ + + H N+++ G V + PM +VTE P
Sbjct: 35 KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAP 93
Query: 234 KGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQND 292
G L L K +G T R+A+ +A GM YL + IHRDL
Sbjct: 94 LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAA----------- 139
Query: 293 RNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSC--RYVAPEVFKNEEYDTKVDVFS 350
RN+L +K+ DFG+ + L +D + + + APE K + D +
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 199
Query: 351 FALILQEMIE-GCPPFTMKHDNEVPKAY---AARQRPPFKAPAKLYARGLKELIEECWNE 406
F + L EM G P+ + +++ R P P +Y ++ +CW
Sbjct: 200 FGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY-----NVMVQCWAH 254
Query: 407 KPAKRPTF 414
KP RPTF
Sbjct: 255 KPEDRPTF 262
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 129/295 (43%), Gaps = 43/295 (14%)
Query: 143 REVPEYEIDPHELDFTNSVEITKGTFILAFWRGIQ-----VAVKKLGEEVISDDDRVRAF 197
+E P +I DF + KG+F F + A+K L ++V+ DD V
Sbjct: 5 KERPSLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECT 64
Query: 198 RDELALLQ-KIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFA 256
E +L HP + + V EYL GDL ++ S A +A
Sbjct: 65 MVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYA 124
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTV 316
+I G+ +LH I++RDL+ NIL D G++K+ADFG+ K +
Sbjct: 125 AEIILGLQFLHSKG---IVYRDLKLD-----------NILLDKDGHIKIADFGMCKENML 170
Query: 317 KEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKA 376
+ + T Y+APE+ ++Y+ VD +SF ++L EM+ G PF + + E+
Sbjct: 171 GDAKTNXFCGTP-DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL--F 227
Query: 377 YAARQRPPFKAPAKLYARGL----KELIEECWNEKPAKR----------PTFRQI 417
++ R PF Y R L K+L+ + + +P KR P FR+I
Sbjct: 228 HSIRMDNPF------YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 276
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 102/192 (53%), Gaps = 19/192 (9%)
Query: 189 SDDDR-VRAFR----DELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR 243
SDD++ + F +E++LL+ + HPN+++ +VTE+ G+L +
Sbjct: 80 SDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN 139
Query: 244 KGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNL 303
+ A I G+ YLH++ I+HRD++P ++ + +N ++L N+
Sbjct: 140 RHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILL---ENKNSLL-----NI 188
Query: 304 KVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCP 363
K+ DFG+S + +D L + + Y+APEV K ++Y+ K DV+S +I+ ++ G P
Sbjct: 189 KIVDFGLSSFFS--KDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYP 245
Query: 364 PFTMKHDNEVPK 375
PF ++D ++ K
Sbjct: 246 PFGGQNDQDIIK 257
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 108/246 (43%), Gaps = 27/246 (10%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+ VAVK L +V+S + + F E+ + + H N+++ G V + PM +VTE P G
Sbjct: 47 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLG 105
Query: 236 DLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L L K +G T R+A+ +A GM YL + IHRDL RN
Sbjct: 106 SLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAA-----------RN 151
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSC--RYVAPEVFKNEEYDTKVDVFSFA 352
+L +K+ DFG+ + L +D + + + APE K + D + F
Sbjct: 152 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 211
Query: 353 LILQEMIE-GCPPFTMKHDNEVPKAY---AARQRPPFKAPAKLYARGLKELIEECWNEKP 408
+ L EM G P+ + +++ R P P +Y ++ +CW KP
Sbjct: 212 VTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY-----NVMVQCWAHKP 266
Query: 409 AKRPTF 414
RPTF
Sbjct: 267 EDRPTF 272
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 116/245 (47%), Gaps = 22/245 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G +VA+K + ++V++ D E++ L+ +RHP++++ + +++V EY
Sbjct: 39 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AG 97
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
+L ++ ++ + A RF I + Y H +K I+HRDL+P N
Sbjct: 98 NELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKP-----------EN 143
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY-DTKVDVFSFAL 353
+L D+ N+K+ADFG+S ++T +C S Y APEV + Y +VDV+S +
Sbjct: 144 LLLDEHLNVKIADFGLSNIMTDGNFLKTSC--GSPNYAAPEVISGKLYAGPEVDVWSCGV 201
Query: 354 ILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPT 413
IL M+ PF D +P + + P K + G LI+ P R +
Sbjct: 202 ILYVMLCRRLPFD---DESIPVLFKNISNGVYTLP-KFLSPGAAGLIKRMLIVNPLNRIS 257
Query: 414 FRQII 418
+I+
Sbjct: 258 IHEIM 262
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 17/243 (6%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ AVK + + + D R E+ LL+K+ HPN+++ + SS IV E G+
Sbjct: 49 EYAVKVINKASAKNKDTSTILR-EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGE 107
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
L + ++ A R + G+ Y+H++ I+HRDL+P ++ + + D +I
Sbjct: 108 LFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDI- 163
Query: 297 RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQ 356
K+ DFG+S +++ + + + Y+APEV + YD K DV+S +IL
Sbjct: 164 -------KIIDFGLSTCF--QQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILY 213
Query: 357 EMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPA-KLYARGLKELIEECWNEKPAKRPTFR 415
++ G PPF K++ ++ K + F P + + K+LI + P+ R T
Sbjct: 214 ILLSGTPPFYGKNEYDILKR-VETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITAT 272
Query: 416 QII 418
Q +
Sbjct: 273 QCL 275
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 116/245 (47%), Gaps = 22/245 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G +VA+K + ++V++ D E++ L+ +RHP++++ + +++V EY
Sbjct: 38 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AG 96
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
+L ++ ++ + A RF I + Y H +K I+HRDL+P N
Sbjct: 97 NELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKP-----------EN 142
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY-DTKVDVFSFAL 353
+L D+ N+K+ADFG+S ++T +C S Y APEV + Y +VDV+S +
Sbjct: 143 LLLDEHLNVKIADFGLSNIMTDGNFLKTSC--GSPNYAAPEVISGKLYAGPEVDVWSCGV 200
Query: 354 ILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPT 413
IL M+ PF D +P + + P K + G LI+ P R +
Sbjct: 201 ILYVMLCRRLPFD---DESIPVLFKNISNGVYTLP-KFLSPGAAGLIKRMLIVNPLNRIS 256
Query: 414 FRQII 418
+I+
Sbjct: 257 IHEIM 261
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 17/243 (6%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ AVK + + + D R E+ LL+K+ HPN+++ + SS IV E G+
Sbjct: 49 EYAVKVINKASAKNKDTSTILR-EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGE 107
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
L + ++ A R + G+ Y+H++ I+HRDL+P ++ + + D +I
Sbjct: 108 LFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDI- 163
Query: 297 RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQ 356
K+ DFG+S +++ + + + Y+APEV + YD K DV+S +IL
Sbjct: 164 -------KIIDFGLSTCF--QQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILY 213
Query: 357 EMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPA-KLYARGLKELIEECWNEKPAKRPTFR 415
++ G PPF K++ ++ K + F P + + K+LI + P+ R T
Sbjct: 214 ILLSGTPPFYGKNEYDILKR-VETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITAT 272
Query: 416 QII 418
Q +
Sbjct: 273 QCL 275
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 116/245 (47%), Gaps = 22/245 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G +VA+K + ++V++ D E++ L+ +RHP++++ + +++V EY
Sbjct: 29 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AG 87
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
+L ++ ++ + A RF I + Y H +K I+HRDL+P N
Sbjct: 88 NELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKP-----------EN 133
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY-DTKVDVFSFAL 353
+L D+ N+K+ADFG+S ++T +C S Y APEV + Y +VDV+S +
Sbjct: 134 LLLDEHLNVKIADFGLSNIMTDGNFLKTSC--GSPNYAAPEVISGKLYAGPEVDVWSCGV 191
Query: 354 ILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPT 413
IL M+ PF D +P + + P K + G LI+ P R +
Sbjct: 192 ILYVMLCRRLPFD---DESIPVLFKNISNGVYTLP-KFLSPGAAGLIKRMLIVNPLNRIS 247
Query: 414 FRQII 418
+I+
Sbjct: 248 IHEIM 252
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 21/199 (10%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+K + +E + + + + +E+A+L KI+HPN+V + ++ + + G+L
Sbjct: 46 VAIKCIAKEAL--EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 238 RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILR 297
+ KG A R + + YLH+ + I+HRDL+P +L D I+
Sbjct: 104 FDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIM- 159
Query: 298 DDSGNLKVADFGVSKLLTVKEDRPLTCQDTSC---RYVAPEVFKNEEYDTKVDVFSFALI 354
++DFG+SK+ + P + T+C YVAPEV + Y VD +S +I
Sbjct: 160 -------ISDFGLSKM-----EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
Query: 355 LQEMIEGCPPFTMKHDNEV 373
++ G PPF ++D ++
Sbjct: 208 AYILLCGYPPFYDENDAKL 226
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 129/295 (43%), Gaps = 43/295 (14%)
Query: 143 REVPEYEIDPHELDFTNSVEITKGTFILAFWRGIQ-----VAVKKLGEEVISDDDRVRAF 197
+E P +I DF + KG+F F + A+K L ++V+ DD V
Sbjct: 6 KERPSLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECT 65
Query: 198 RDELALLQ-KIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFA 256
E +L HP + + V EYL GDL ++ S A +A
Sbjct: 66 MVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYA 125
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTV 316
+I G+ +LH I++RDL+ NIL D G++K+ADFG+ K +
Sbjct: 126 AEIILGLQFLHSKG---IVYRDLKLD-----------NILLDKDGHIKIADFGMCKENML 171
Query: 317 KEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKA 376
+ + T Y+APE+ ++Y+ VD +SF ++L EM+ G PF + + E+
Sbjct: 172 GDAKTNEFCGTP-DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL--F 228
Query: 377 YAARQRPPFKAPAKLYARGL----KELIEECWNEKPAKR----------PTFRQI 417
++ R PF Y R L K+L+ + + +P KR P FR+I
Sbjct: 229 HSIRMDNPF------YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 277
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 21/199 (10%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+K + +E + + + + +E+A+L KI+HPN+V + ++ + + G+L
Sbjct: 46 VAIKCIAKEAL--EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 238 RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILR 297
+ KG A R + + YLH+ + I+HRDL+P +L D I+
Sbjct: 104 FDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIM- 159
Query: 298 DDSGNLKVADFGVSKLLTVKEDRPLTCQDTSC---RYVAPEVFKNEEYDTKVDVFSFALI 354
++DFG+SK+ + P + T+C YVAPEV + Y VD +S +I
Sbjct: 160 -------ISDFGLSKM-----EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
Query: 355 LQEMIEGCPPFTMKHDNEV 373
++ G PPF ++D ++
Sbjct: 208 AYILLCGYPPFYDENDAKL 226
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 116/245 (47%), Gaps = 22/245 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G +VA+K + ++V++ D E++ L+ +RHP++++ + +++V EY
Sbjct: 33 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AG 91
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
+L ++ ++ + A RF I + Y H +K I+HRDL+P N
Sbjct: 92 NELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKP-----------EN 137
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY-DTKVDVFSFAL 353
+L D+ N+K+ADFG+S ++T +C S Y APEV + Y +VDV+S +
Sbjct: 138 LLLDEHLNVKIADFGLSNIMTDGNFLKTSC--GSPNYAAPEVISGKLYAGPEVDVWSCGV 195
Query: 354 ILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPT 413
IL M+ PF D +P + + P K + G LI+ P R +
Sbjct: 196 ILYVMLCRRLPFD---DESIPVLFKNISNGVYTLP-KFLSPGAAGLIKRMLIVNPLNRIS 251
Query: 414 FRQII 418
+I+
Sbjct: 252 IHEIM 256
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 121/277 (43%), Gaps = 53/277 (19%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVK L + ++ E+ +L+ + H +++++ G + +V EY+
Sbjct: 43 GEMVAVKALKADC--GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 233 PKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQND 292
P G LR +L R ++ + + FA I GM YLH IHR+L
Sbjct: 101 PLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHSQH---YIHRNLAA----------- 145
Query: 293 RNILRDDSGNLKVADFGVSKLLT-------VKEDRPLTCQDTSCRYVAPEVFKNEEYDTK 345
RN+L D+ +K+ DFG++K + V+ED D+ + APE K ++
Sbjct: 146 RNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED-----GDSPVFWYAPECLKEYKFYYA 200
Query: 346 VDVFSFALILQEMIEGC-----PPFTMKHDNEVPKAY------------AARQRPPFKAP 388
DV+SF + L E++ C PP + + R P K P
Sbjct: 201 SDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCP 260
Query: 389 AKLYARGLKELIEECWNEKPAKRPTFRQIITRLESIN 425
++Y L++ CW + + RPTF +I L++++
Sbjct: 261 CEVY-----HLMKNCWETEASFRPTFENLIPILKTVH 292
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 21/199 (10%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+K + +E + + + + +E+A+L KI+HPN+V + ++ + + G+L
Sbjct: 46 VAIKCIAKEAL--EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 238 RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILR 297
+ KG A R + + YLH+ + I+HRDL+P +L D I+
Sbjct: 104 FDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIM- 159
Query: 298 DDSGNLKVADFGVSKLLTVKEDRPLTCQDTSC---RYVAPEVFKNEEYDTKVDVFSFALI 354
++DFG+SK+ + P + T+C YVAPEV + Y VD +S +I
Sbjct: 160 -------ISDFGLSKM-----EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
Query: 355 LQEMIEGCPPFTMKHDNEV 373
++ G PPF ++D ++
Sbjct: 208 AYILLCGYPPFYDENDAKL 226
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 121/277 (43%), Gaps = 53/277 (19%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVK L + ++ E+ +L+ + H +++++ G + +V EY+
Sbjct: 43 GEMVAVKALKADC--GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 233 PKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQND 292
P G LR +L R ++ + + FA I GM YLH IHR+L
Sbjct: 101 PLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQH---YIHRNLAA----------- 145
Query: 293 RNILRDDSGNLKVADFGVSKLLT-------VKEDRPLTCQDTSCRYVAPEVFKNEEYDTK 345
RN+L D+ +K+ DFG++K + V+ED D+ + APE K ++
Sbjct: 146 RNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED-----GDSPVFWYAPECLKEYKFYYA 200
Query: 346 VDVFSFALILQEMIEGC-----PPFTMKHDNEVPKAY------------AARQRPPFKAP 388
DV+SF + L E++ C PP + + R P K P
Sbjct: 201 SDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCP 260
Query: 389 AKLYARGLKELIEECWNEKPAKRPTFRQIITRLESIN 425
++Y L++ CW + + RPTF +I L++++
Sbjct: 261 CEVY-----HLMKNCWETEASFRPTFENLIPILKTVH 292
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 110/243 (45%), Gaps = 25/243 (10%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
+A+K L + + + R E+ + +RHPN+++ + ++ E+ P+G+L
Sbjct: 43 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL 102
Query: 238 RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILR 297
L++ G + F ++A ++Y HE K +IHRD++P +L + Y
Sbjct: 103 YKELQKHGRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGY--------- 150
Query: 298 DDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQE 357
G LK+ADFG S R + + Y+ PE+ + + +D KVD++ ++ E
Sbjct: 151 --KGELKIADFGWSVHAPSLRRRXMC---GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYE 205
Query: 358 MIEGCPPFTMKHDNEVPKAYAA--RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 415
+ G PPF E + + PPF + G K+LI + P +R +
Sbjct: 206 FLVGMPPFDSPSHTETHRRIVNVDLKFPPF------LSDGSKDLISKLLRYHPPQRLPLK 259
Query: 416 QII 418
++
Sbjct: 260 GVM 262
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 110/243 (45%), Gaps = 25/243 (10%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
+A+K L + + + R E+ + +RHPN+++ + ++ E+ P+G+L
Sbjct: 42 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL 101
Query: 238 RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILR 297
L++ G + F ++A ++Y HE K +IHRD++P +L + Y
Sbjct: 102 YKELQKHGRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGY--------- 149
Query: 298 DDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQE 357
G LK+ADFG S R + + Y+ PE+ + + +D KVD++ ++ E
Sbjct: 150 --KGELKIADFGWSVHAPSLRRRXMC---GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYE 204
Query: 358 MIEGCPPFTMKHDNEVPKAYAA--RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 415
+ G PPF E + + PPF + G K+LI + P +R +
Sbjct: 205 FLVGMPPFDSPSHTETHRRIVNVDLKFPPF------LSDGSKDLISKLLRYHPPQRLPLK 258
Query: 416 QII 418
++
Sbjct: 259 GVM 261
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 111/257 (43%), Gaps = 35/257 (13%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 35 QSKFILALKVLFKTQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 86
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P
Sbjct: 87 VYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR---VIHRDIKPE-- 141
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR---YVAPEVFKNEE 341
N+L +G LK+ADFG S P + + T C Y+ PE+ +
Sbjct: 142 ---------NLLLGSNGELKIADFGWSV------HAPSSRRTTLCGTLDYLPPEMIEGRM 186
Query: 342 YDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 401
+D KVD++S ++ E + G PPF E Y R F P G ++LI
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQET---YRRISRVEFTFP-DFVTEGARDLIS 242
Query: 402 ECWNEKPAKRPTFRQII 418
++R T +++
Sbjct: 243 RLLKHNASQRLTLAEVL 259
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 110/243 (45%), Gaps = 25/243 (10%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
+A+K L + + + R E+ + +RHPN+++ + ++ E+ P+G+L
Sbjct: 42 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL 101
Query: 238 RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILR 297
L++ G + F ++A ++Y HE K +IHRD++P +L + Y
Sbjct: 102 YKELQKHGRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGY--------- 149
Query: 298 DDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQE 357
G LK+ADFG S R + + Y+ PE+ + + +D KVD++ ++ E
Sbjct: 150 --KGELKIADFGWSVHAPSLRRRXMC---GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYE 204
Query: 358 MIEGCPPFTMKHDNEVPKAYAA--RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 415
+ G PPF E + + PPF + G K+LI + P +R +
Sbjct: 205 FLVGMPPFDSPSHTETHRRIVNVDLKFPPF------LSDGSKDLISKLLRYHPPQRLPLK 258
Query: 416 QII 418
++
Sbjct: 259 GVM 261
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 118/268 (44%), Gaps = 35/268 (13%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVTE 230
++VAVK + + S + F E A ++ HPNV++ LG + S M++
Sbjct: 63 LKVAVKTMKLDN-SSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILP 121
Query: 231 YLPKGDLRAFLKRK------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
++ GDL +L + T ++F +DIA GM YL +HRDL
Sbjct: 122 FMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAA--- 175
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYD 343
RN + D + VADFG+SK + + R +++A E + Y
Sbjct: 176 --------RNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYT 227
Query: 344 TKVDVFSFALILQEM-IEGCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARGLKELI 400
+K DV++F + + E+ G P+ ++E+ + R + P +LY E++
Sbjct: 228 SKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLDELY-----EIM 282
Query: 401 EECWNEKPAKRPTFRQIITRLESINNSI 428
CW P RPTF + +LE + S+
Sbjct: 283 YSCWRTDPLDRPTFSVLRLQLEKLLESL 310
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 87/172 (50%), Gaps = 21/172 (12%)
Query: 198 RDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFAL 257
+ E +L++++HP +V + A + ++ EYL G+L L+R+G TA +
Sbjct: 69 KAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA 128
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVK 317
+I+ + +LH+ II+RDL+P NI+ + G++K+ DFG+ K +
Sbjct: 129 EISMALGHLHQKG---IIYRDLKP-----------ENIMLNHQGHVKLTDFGLCK----E 170
Query: 318 EDRPLTCQDTSC---RYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFT 366
T T C Y+APE+ ++ VD +S ++ +M+ G PPFT
Sbjct: 171 SIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFT 222
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 95/191 (49%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 171
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G +KVADFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 172 LLIDQQGYIKVADFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 109/244 (44%), Gaps = 24/244 (9%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLG---AVTQSSPM-MIVTEYLP 233
VAVK L ++ D FR E + HP +V A T + P+ IV EY+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDR 293
LR + +G + P A+ D + +N+ H+N IIHRD++P+
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA----------- 145
Query: 294 NILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT--SCRYVAPEVFKNEEYDTKVDVFSF 351
NIL + +KV DFG+++ + + + +Y++PE + + D + DV+S
Sbjct: 146 NILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 352 ALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKR 411
+L E++ G PPFT D+ V AY + P P GL ++ + AK
Sbjct: 206 GCVLYEVLTGEPPFT--GDSPVSVAYQHVREDPI--PPSARHEGLSADLDAVVLKALAKN 261
Query: 412 PTFR 415
P R
Sbjct: 262 PENR 265
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 22/200 (11%)
Query: 179 AVKKLGEEVISDDDRVRAFRDELALL-QKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
A++ + +E+++DD+ + + E + Q HP +V S + V EY+ GDL
Sbjct: 81 AMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL 140
Query: 238 RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILR 297
++R+ L A ++ +I+ +NYLHE II+RDL+ N+L
Sbjct: 141 MFHMQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLD-----------NVLL 186
Query: 298 DDSGNLKVADFGVSKLLTVKEDRPLTCQDTSC---RYVAPEVFKNEEYDTKVDVFSFALI 354
D G++K+ D+G+ K + RP T C Y+APE+ + E+Y VD ++ ++
Sbjct: 187 DSEGHIKLTDYGMCK----EGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVL 242
Query: 355 LQEMIEGCPPFTMKHDNEVP 374
+ EM+ G PF + ++ P
Sbjct: 243 MFEMMAGRSPFDIVGSSDNP 262
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 98/199 (49%), Gaps = 21/199 (10%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+K + ++ + + + + +E+A+L KI+HPN+V + ++ + + G+L
Sbjct: 46 VAIKCIAKKAL--EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 238 RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILR 297
+ KG A R + + YLH+ + I+HRDL+P +L D I+
Sbjct: 104 FDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIM- 159
Query: 298 DDSGNLKVADFGVSKLLTVKEDRPLTCQDTSC---RYVAPEVFKNEEYDTKVDVFSFALI 354
++DFG+SK+ + P + T+C YVAPEV + Y VD +S +I
Sbjct: 160 -------ISDFGLSKM-----EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
Query: 355 LQEMIEGCPPFTMKHDNEV 373
++ G PPF ++D ++
Sbjct: 208 AYILLCGYPPFYDENDAKL 226
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 130/272 (47%), Gaps = 31/272 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
DF + KG+F + G++VA+K + ++ + V+ ++E+ + +++HP
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPST---AVRFALDIARGMNYLH 267
++++ S+ + +V E G++ +LK + +KP + A F I GM YLH
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLH 129
Query: 268 ENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT 327
+ I+HRDL S+L + RN+ N+K+ADFG++ L + ++ T T
Sbjct: 130 SHG---ILHRDLTLSNLLLT-----RNM------NIKIADFGLATQLKMPHEKHYTLCGT 175
Query: 328 SCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF-TMKHDNEVPKAYAARQRPPFK 386
Y++PE+ + + DV+S + ++ G PPF T N + K A ++
Sbjct: 176 P-NYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA----DYE 230
Query: 387 APAKLYARGLKELIEECWNEKPAKRPTFRQII 418
P+ L K+LI + PA R + ++
Sbjct: 231 MPSFLSIEA-KDLIHQLLRRNPADRLSLSSVL 261
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 122/276 (44%), Gaps = 30/276 (10%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G + AVK + + + + E+ LL+++ HPN+ + +V E
Sbjct: 51 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTG 110
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G+L + + A R + G+ Y H+NK I+HRDL+P +L + D N
Sbjct: 111 GELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNK---IVHRDLKPENLLLESKSKDAN 167
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
I ++ DFG+S + + + Y+APEV YD K DV+S +I
Sbjct: 168 I--------RIIDFGLSTHFEAS--KKXKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVI 216
Query: 355 LQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPA-KLYARGLKELIEECWNEKPAKRPT 413
L ++ GCPPF ++ ++ K + + F+ P K + K+LI + P+ R +
Sbjct: 217 LYILLSGCPPFNGANEYDILKK-VEKGKYTFELPQWKKVSESAKDLIRKXLTYVPSXRIS 275
Query: 414 FR--------------QIITRLESINNSINHKRRWK 435
R QI + S++N+I + R+++
Sbjct: 276 ARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQ 311
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 24/244 (9%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLG---AVTQSSPM-MIVTEYLP 233
VAVK L ++ D FR E + HP +V A T + P+ IV EY+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVD 99
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDR 293
LR + +G + P A+ D + +N+ H+N IIHRD++P+
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA----------- 145
Query: 294 NILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT--SCRYVAPEVFKNEEYDTKVDVFSF 351
NI+ + +KV DFG+++ + + + +Y++PE + + D + DV+S
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 352 ALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKR 411
+L E++ G PPFT D+ V AY + P P GL ++ + AK
Sbjct: 206 GCVLYEVLTGEPPFT--GDSPVSVAYQHVREDPI--PPSARHEGLSADLDAVVLKALAKN 261
Query: 412 PTFR 415
P R
Sbjct: 262 PENR 265
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 122/251 (48%), Gaps = 27/251 (10%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G Q +K++ +S +R + R E+A+L ++HPN+VQ+ + ++ + IV +Y
Sbjct: 49 GRQYVIKEINISRMSSKEREES-RREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEG 107
Query: 235 GDL-RAFLKRKGAL-KPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQND 292
GDL + +KG L + + + + I + ++H+ K I+HRD++
Sbjct: 108 GDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIK-----------S 153
Query: 293 RNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFA 352
+NI G +++ DFG++++L + C T Y++PE+ +N+ Y+ K D+++
Sbjct: 154 QNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTP-YYLSPEICENKPYNNKSDIWALG 212
Query: 353 LILQEMIEGCPPFTMKHDNEVP--KAYAARQRPPFKAPAKL-YARGLKELIEECWNEKPA 409
+L E+ T+KH E K + P L Y+ L+ L+ + + P
Sbjct: 213 CVLYELC------TLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPR 266
Query: 410 KRPTFRQIITR 420
RP+ I+ +
Sbjct: 267 DRPSVNSILEK 277
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 114/244 (46%), Gaps = 23/244 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G+ VA+KK+ + D E+ LL+++ HPNV+++ + + + + IV E
Sbjct: 57 GVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADA 116
Query: 235 GDL----RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQ 290
GDL + F K+K + T ++ + + + ++H + ++HRD++P+++++
Sbjct: 117 GDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFIT--- 170
Query: 291 NDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFS 350
+G +K+ D G+ + + K + T Y++PE Y+ K D++S
Sbjct: 171 --------ATGVVKLGDLGLGRFFSSKTTAAHSLVGTP-YYMSPERIHENGYNFKSDIWS 221
Query: 351 FALILQEMIEGCPPFTMKHDN--EVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKP 408
+L EM PF N + K PP P+ Y+ L++L+ C N P
Sbjct: 222 LGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPL--PSDHYSEELRQLVNMCINPDP 279
Query: 409 AKRP 412
KRP
Sbjct: 280 EKRP 283
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 119/269 (44%), Gaps = 41/269 (15%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VAVK L E + + + F+ E LL ++H ++V+F G T+ P+++V EY+ GDL
Sbjct: 74 VAVKALKE---ASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL 130
Query: 238 RAFLKRK---------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
FL+ G L + A +A GM YL + +HRDL
Sbjct: 131 NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLA-- 185
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEE 341
RN L +K+ DFG+S+ + + R R++ PE +
Sbjct: 186 ---------TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRK 236
Query: 342 YDTKVDVFSFALILQEMIEGC--PPFTMKHDNEVPKAYAARQ-RPPFKAPAKLYARGLKE 398
+ T+ DV+SF ++L E+ P + + + + R+ P P ++YA
Sbjct: 237 FTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYA----- 291
Query: 399 LIEECWNEKPAKRPTFRQIITRLESINNS 427
++ CW +P +R + + + RL+++ +
Sbjct: 292 IMRGCWQREPQQRHSIKDVHARLQALAQA 320
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 14/190 (7%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I+VA+K + ++ ++ F E+ ++ H N+V + + +V EY+
Sbjct: 37 IKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGP 96
Query: 236 DLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNI 295
L +++ G L TA+ F I G+ + H+ + I+HRD++P +NI
Sbjct: 97 TLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKP-----------QNI 142
Query: 296 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 355
L D + LK+ DFG++K L+ + +Y +PE K E D D++S ++L
Sbjct: 143 LIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVL 202
Query: 356 QEMIEGCPPF 365
EM+ G PPF
Sbjct: 203 YEMLVGEPPF 212
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 119/269 (44%), Gaps = 41/269 (15%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VAVK L E + + + F+ E LL ++H ++V+F G T+ P+++V EY+ GDL
Sbjct: 45 VAVKALKE---ASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL 101
Query: 238 RAFLKRK---------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
FL+ G L + A +A GM YL + +HRDL
Sbjct: 102 NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLA-- 156
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEE 341
RN L +K+ DFG+S+ + + R R++ PE +
Sbjct: 157 ---------TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRK 207
Query: 342 YDTKVDVFSFALILQEMIEGC--PPFTMKHDNEVPKAYAARQ-RPPFKAPAKLYARGLKE 398
+ T+ DV+SF ++L E+ P + + + + R+ P P ++YA
Sbjct: 208 FTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYA----- 262
Query: 399 LIEECWNEKPAKRPTFRQIITRLESINNS 427
++ CW +P +R + + + RL+++ +
Sbjct: 263 IMRGCWQREPQQRHSIKDVHARLQALAQA 291
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 119/269 (44%), Gaps = 41/269 (15%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VAVK L E + + + F+ E LL ++H ++V+F G T+ P+++V EY+ GDL
Sbjct: 51 VAVKALKE---ASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL 107
Query: 238 RAFLKRK---------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
FL+ G L + A +A GM YL + +HRDL
Sbjct: 108 NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLA-- 162
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEE 341
RN L +K+ DFG+S+ + + R R++ PE +
Sbjct: 163 ---------TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRK 213
Query: 342 YDTKVDVFSFALILQEMIEGC--PPFTMKHDNEVPKAYAARQ-RPPFKAPAKLYARGLKE 398
+ T+ DV+SF ++L E+ P + + + + R+ P P ++YA
Sbjct: 214 FTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYA----- 268
Query: 399 LIEECWNEKPAKRPTFRQIITRLESINNS 427
++ CW +P +R + + + RL+++ +
Sbjct: 269 IMRGCWQREPQQRHSIKDVHARLQALAQA 297
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 104/242 (42%), Gaps = 41/242 (16%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK--------RKGALKPST 251
E+ + + HPN+V + + + +V + L G + +K + G L ST
Sbjct: 58 EIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEST 117
Query: 252 AVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVS 311
++ G+ YLH+N IHRD++ NIL + G++++ADFGVS
Sbjct: 118 IATILREVLEGLEYLHKNGQ---IHRDVKAG-----------NILLGEDGSVQIADFGVS 163
Query: 312 KLLTVKEDRPL-----TCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMIEGCPPF 365
L D T T C ++APEV + YD K D++SF + E+ G P+
Sbjct: 164 AFLATGGDITRNKVRKTFVGTPC-WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 222
Query: 366 ---------TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQ 416
+ N+ P Q K K Y + +++I C + P KRPT +
Sbjct: 223 HKYPPMKVLMLTLQNDPPSLETGVQD---KEMLKKYGKSFRKMISLCLQKDPEKRPTAAE 279
Query: 417 II 418
++
Sbjct: 280 LL 281
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 93/168 (55%), Gaps = 18/168 (10%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR-KGALKPSTAVRFALD 258
E+++L++++H N+V+ + +++V E+L + DL+ L +G L+ TA F L
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQ 108
Query: 259 IARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKE 318
+ G+ Y H+ + ++HRDL+P +N+L + G LK+ADFG+++ +
Sbjct: 109 LLNGIAYCHDRR---VLHRDLKP-----------QNLLINREGELKIADFGLARAFGIPV 154
Query: 319 DRPLTCQDTSCRYVAPEVF-KNEEYDTKVDVFSFALILQEMIEGCPPF 365
R T + + Y AP+V +++Y T +D++S I EM+ G P F
Sbjct: 155 -RKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLF 201
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 104/242 (42%), Gaps = 41/242 (16%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK--------RKGALKPST 251
E+ + + HPN+V + + + +V + L G + +K + G L ST
Sbjct: 63 EIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEST 122
Query: 252 AVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVS 311
++ G+ YLH+N IHRD++ NIL + G++++ADFGVS
Sbjct: 123 IATILREVLEGLEYLHKNGQ---IHRDVKAG-----------NILLGEDGSVQIADFGVS 168
Query: 312 KLLTVKEDRPL-----TCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMIEGCPPF 365
L D T T C ++APEV + YD K D++SF + E+ G P+
Sbjct: 169 AFLATGGDITRNKVRKTFVGTPC-WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 227
Query: 366 ---------TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQ 416
+ N+ P Q K K Y + +++I C + P KRPT +
Sbjct: 228 HKYPPMKVLMLTLQNDPPSLETGVQD---KEMLKKYGKSFRKMISLCLQKDPEKRPTAAE 284
Query: 417 II 418
++
Sbjct: 285 LL 286
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 24/244 (9%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLG---AVTQSSPM-MIVTEYLP 233
VAVK L ++ D FR E + HP +V A T + P+ IV EY+
Sbjct: 57 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 116
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDR 293
LR + +G + P A+ D + +N+ H+N IIHRD++P+
Sbjct: 117 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA----------- 162
Query: 294 NILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT--SCRYVAPEVFKNEEYDTKVDVFSF 351
NI+ + +KV DFG+++ + + + +Y++PE + + D + DV+S
Sbjct: 163 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 222
Query: 352 ALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKR 411
+L E++ G PPFT D+ V AY + P P GL ++ + AK
Sbjct: 223 GCVLYEVLTGEPPFT--GDSPVSVAYQHVREDPI--PPSARHEGLSADLDAVVLKALAKN 278
Query: 412 PTFR 415
P R
Sbjct: 279 PENR 282
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 93/168 (55%), Gaps = 18/168 (10%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR-KGALKPSTAVRFALD 258
E+++L++++H N+V+ + +++V E+L + DL+ L +G L+ TA F L
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQ 108
Query: 259 IARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKE 318
+ G+ Y H+ + ++HRDL+P +N+L + G LK+ADFG+++ +
Sbjct: 109 LLNGIAYCHDRR---VLHRDLKP-----------QNLLINREGELKIADFGLARAFGIPV 154
Query: 319 DRPLTCQDTSCRYVAPEVF-KNEEYDTKVDVFSFALILQEMIEGCPPF 365
R T + + Y AP+V +++Y T +D++S I EM+ G P F
Sbjct: 155 -RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLF 201
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 93/168 (55%), Gaps = 18/168 (10%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR-KGALKPSTAVRFALD 258
E+++L++++H N+V+ + +++V E+L + DL+ L +G L+ TA F L
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQ 108
Query: 259 IARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKE 318
+ G+ Y H+ + ++HRDL+P +N+L + G LK+ADFG+++ +
Sbjct: 109 LLNGIAYCHDRR---VLHRDLKP-----------QNLLINREGELKIADFGLARAFGIPV 154
Query: 319 DRPLTCQDTSCRYVAPEVF-KNEEYDTKVDVFSFALILQEMIEGCPPF 365
R T + + Y AP+V +++Y T +D++S I EM+ G P F
Sbjct: 155 -RKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLF 201
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 22/200 (11%)
Query: 179 AVKKLGEEVISDDDRVRAFRDELALL-QKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
A+K + +E+++DD+ + + E + Q HP +V S + V EY+ GDL
Sbjct: 34 AMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL 93
Query: 238 RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILR 297
++R+ L A ++ +I+ +NYLHE II+RDL+ N+L
Sbjct: 94 MFHMQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLD-----------NVLL 139
Query: 298 DDSGNLKVADFGVSKLLTVKEDRPLTCQDTSC---RYVAPEVFKNEEYDTKVDVFSFALI 354
D G++K+ D+G+ K + RP C Y+APE+ + E+Y VD ++ ++
Sbjct: 140 DSEGHIKLTDYGMCK----EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVL 195
Query: 355 LQEMIEGCPPFTMKHDNEVP 374
+ EM+ G PF + ++ P
Sbjct: 196 MFEMMAGRSPFDIVGSSDNP 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 24/244 (9%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLG---AVTQSSPM-MIVTEYLP 233
VAVK L ++ D FR E + HP +V A T + P+ IV EY+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDR 293
LR + +G + P A+ D + +N+ H+N IIHRD++P+
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA----------- 145
Query: 294 NILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT--SCRYVAPEVFKNEEYDTKVDVFSF 351
NI+ + +KV DFG+++ + + + +Y++PE + + D + DV+S
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 352 ALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKR 411
+L E++ G PPFT D+ V AY + P P GL ++ + AK
Sbjct: 206 GCVLYEVLTGEPPFT--GDSPVSVAYQHVREDPI--PPSARHEGLSADLDAVVLKALAKN 261
Query: 412 PTFR 415
P R
Sbjct: 262 PENR 265
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 22/200 (11%)
Query: 179 AVKKLGEEVISDDDRVRAFRDELALL-QKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
A+K + +E+++DD+ + + E + Q HP +V S + V EY+ GDL
Sbjct: 49 AMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL 108
Query: 238 RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILR 297
++R+ L A ++ +I+ +NYLHE II+RDL+ N+L
Sbjct: 109 MFHMQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLD-----------NVLL 154
Query: 298 DDSGNLKVADFGVSKLLTVKEDRPLTCQDTSC---RYVAPEVFKNEEYDTKVDVFSFALI 354
D G++K+ D+G+ K + RP C Y+APE+ + E+Y VD ++ ++
Sbjct: 155 DSEGHIKLTDYGMCK----EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVL 210
Query: 355 LQEMIEGCPPFTMKHDNEVP 374
+ EM+ G PF + ++ P
Sbjct: 211 MFEMMAGRSPFDIVGSSDNP 230
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 24/244 (9%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLG---AVTQSSPM-MIVTEYLP 233
VAVK L ++ D FR E + HP +V A T + P+ IV EY+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDR 293
LR + +G + P A+ D + +N+ H+N IIHRD++P+
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA----------- 145
Query: 294 NILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT--SCRYVAPEVFKNEEYDTKVDVFSF 351
NI+ + +KV DFG+++ + + + +Y++PE + + D + DV+S
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 352 ALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKR 411
+L E++ G PPFT D+ V AY + P P GL ++ + AK
Sbjct: 206 GCVLYEVLTGEPPFT--GDSPVSVAYQHVREDPI--PPSARHEGLSADLDAVVLKALAKN 261
Query: 412 PTFR 415
P R
Sbjct: 262 PENR 265
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 87/169 (51%), Gaps = 15/169 (8%)
Query: 198 RDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFAL 257
+ E +L++++HP +V + A + ++ EYL G+L L+R+G TA +
Sbjct: 69 KAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA 128
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVK 317
+I+ + +LH+ II+RDL+P NI+ + G++K+ DFG+ K ++
Sbjct: 129 EISMALGHLHQKG---IIYRDLKP-----------ENIMLNHQGHVKLTDFGLCK-ESIH 173
Query: 318 EDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFT 366
+ + Y+APE+ ++ VD +S ++ +M+ G PPFT
Sbjct: 174 DGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFT 222
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 17/220 (7%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALD 258
E++++Q+ P+VV++ G+ +++ + IV EY G + ++ R L
Sbjct: 74 EISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQS 133
Query: 259 IARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKE 318
+G+ YLH + IHRD++ NIL + G+ K+ADFGV+ LT
Sbjct: 134 TLKGLEYLHFMRK---IHRDIKAG-----------NILLNTEGHAKLADFGVAGQLTDXM 179
Query: 319 DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYA 378
+ T ++APEV + Y+ D++S + EM EG PP+ H
Sbjct: 180 AKRNXVIGTPF-WMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIP 238
Query: 379 ARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
P F+ P +L++ + +++C + P +R T Q++
Sbjct: 239 TNPPPTFRKP-ELWSDNFTDFVKQCLVKSPEQRATATQLL 277
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 22/200 (11%)
Query: 179 AVKKLGEEVISDDDRVRAFRDELALL-QKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
A+K + +E+++DD+ + + E + Q HP +V S + V EY+ GDL
Sbjct: 38 AMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL 97
Query: 238 RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILR 297
++R+ L A ++ +I+ +NYLHE II+RDL+ N+L
Sbjct: 98 MFHMQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLD-----------NVLL 143
Query: 298 DDSGNLKVADFGVSKLLTVKEDRPLTCQDTSC---RYVAPEVFKNEEYDTKVDVFSFALI 354
D G++K+ D+G+ K + RP C Y+APE+ + E+Y VD ++ ++
Sbjct: 144 DSEGHIKLTDYGMCK----EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVL 199
Query: 355 LQEMIEGCPPFTMKHDNEVP 374
+ EM+ G PF + ++ P
Sbjct: 200 MFEMMAGRSPFDIVGSSDNP 219
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 118/272 (43%), Gaps = 32/272 (11%)
Query: 151 DPHELDFTNSVEITKGTF-ILAFWRGIQ----VAVKKLGEEVISDDDRVRAFRDELALLQ 205
DP +L F++ EI G+F + F R ++ VA+KK+ +++ + E+ LQ
Sbjct: 12 DPEKL-FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70
Query: 206 KIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNY 265
K+RHPN +Q+ G + +V EY K L+ +G+ Y
Sbjct: 71 KLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAY 130
Query: 266 LHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ 325
LH + +IHRD++ NIL + G +K+ DFG + ++ P
Sbjct: 131 LHSHN---MIHRDVKAG-----------NILLSEPGLVKLGDFGSASIMA-----PANXF 171
Query: 326 DTSCRYVAPEV---FKNEEYDTKVDVFSFALILQEMIEGCPP-FTMKHDNEVPKAYAARQ 381
+ ++APEV +YD KVDV+S + E+ E PP F M N + Y Q
Sbjct: 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM---NAMSALYHIAQ 228
Query: 382 RPPFKAPAKLYARGLKELIEECWNEKPAKRPT 413
+ ++ + ++ C + P RPT
Sbjct: 229 NESPALQSGHWSEYFRNFVDSCLQKIPQDRPT 260
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 131/269 (48%), Gaps = 30/269 (11%)
Query: 161 VEITKGTFILAFWRG------IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQ 214
+EI +G+F + +G ++VA +L + ++ +R R F++E L+ ++HPN+V+
Sbjct: 32 IEIGRGSFKTVY-KGLDTETTVEVAWCELQDRKLTKSERQR-FKEEAEXLKGLQHPNIVR 89
Query: 215 FL----GAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENK 270
F V +++VTE G L+ +LKR K + I +G+ +LH
Sbjct: 90 FYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRT 149
Query: 271 PVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 330
P PIIHRDL+ ++++ +G++K+ D G L T+K +
Sbjct: 150 P-PIIHRDLKCDNIFIT----------GPTGSVKIGDLG---LATLKRASFAKAVIGTPE 195
Query: 331 YVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFT-MKHDNEVPKAYAARQRPPFKAPA 389
+ APE ++ E+YD VDV++F E P++ ++ ++ + + +P +
Sbjct: 196 FXAPEXYE-EKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPA--SFD 252
Query: 390 KLYARGLKELIEECWNEKPAKRPTFRQII 418
K+ +KE+IE C + +R + + ++
Sbjct: 253 KVAIPEVKEIIEGCIRQNKDERYSIKDLL 281
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 107/224 (47%), Gaps = 21/224 (9%)
Query: 156 DFTNSVEITKGTF---ILAFWRGIQV--AVKKLGEEVISDDDRVRAFRDEL-ALLQKIRH 209
DF I KG+F +LA + +V AVK L ++ I + E LL+ ++H
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 210 PNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHEN 269
P +V + + + V +Y+ G+L L+R+ A +A +IA + YLH
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHS- 157
Query: 270 KPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSC 329
+ I++RDL+P NIL D G++ + DFG+ K ++ + + +
Sbjct: 158 --LNIVYRDLKP-----------ENILLDSQGHIVLTDFGLCKE-NIEHNSTTSTFCGTP 203
Query: 330 RYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 373
Y+APEV + YD VD + +L EM+ G PPF ++ E+
Sbjct: 204 EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM 247
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 118/272 (43%), Gaps = 32/272 (11%)
Query: 151 DPHELDFTNSVEITKGTF-ILAFWRGIQ----VAVKKLGEEVISDDDRVRAFRDELALLQ 205
DP +L F++ EI G+F + F R ++ VA+KK+ +++ + E+ LQ
Sbjct: 51 DPEKL-FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 109
Query: 206 KIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNY 265
K+RHPN +Q+ G + +V EY K L+ +G+ Y
Sbjct: 110 KLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAY 169
Query: 266 LHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ 325
LH + +IHRD++ NIL + G +K+ DFG + ++ P
Sbjct: 170 LHSHN---MIHRDVKAG-----------NILLSEPGLVKLGDFGSASIMA-----PANXF 210
Query: 326 DTSCRYVAPEV---FKNEEYDTKVDVFSFALILQEMIEGCPP-FTMKHDNEVPKAYAARQ 381
+ ++APEV +YD KVDV+S + E+ E PP F M N + Y Q
Sbjct: 211 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM---NAMSALYHIAQ 267
Query: 382 RPPFKAPAKLYARGLKELIEECWNEKPAKRPT 413
+ ++ + ++ C + P RPT
Sbjct: 268 NESPALQSGHWSEYFRNFVDSCLQKIPQDRPT 299
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 131/310 (42%), Gaps = 36/310 (11%)
Query: 137 MHVKHAREVPEYEIDPHELDFTNSVEITKGTFILAF----WRGIQVAVKKLGEEVISDDD 192
+H+ + E+ +F+N + +G F + G VAVK+L EE +
Sbjct: 20 VHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGE 79
Query: 193 RVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPS-- 250
F+ E+ ++ H N+++ G + ++V Y+ G + + L+ + +P
Sbjct: 80 L--QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLD 137
Query: 251 --TAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADF 308
R AL ARG+ YLH++ IIHRD++ + NIL D+ V DF
Sbjct: 138 WPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAA-----------NILLDEEFEAVVGDF 186
Query: 309 GVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFT-- 366
G++KL+ K+ + ++APE + K DVF + ++L E+I G F
Sbjct: 187 GLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLA 246
Query: 367 -MKHDNEV-----PKAYAARQRPPFKAPAKLYARGLKELIEE-------CWNEKPAKRPT 413
+ +D++V K ++ L E +E+ C P +RP
Sbjct: 247 RLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPK 306
Query: 414 FRQIITRLES 423
+++ LE
Sbjct: 307 MSEVVRMLEG 316
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 118/270 (43%), Gaps = 42/270 (15%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VAVK L + ++ + F+ E LL ++H ++V+F G P+++V EY+ GDL
Sbjct: 48 VAVKALKDPTLAAR---KDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDL 104
Query: 238 RAFLK----------------RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEP 281
FL+ KG L S + A IA GM YL +HRDL
Sbjct: 105 NKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLA- 160
Query: 282 SDLYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNE 340
RN L + +K+ DFG+S+ + + R R++ PE
Sbjct: 161 ----------TRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYR 210
Query: 341 EYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAARQ--RPPFKAPAKLYARGLK 397
++ T+ DV+SF +IL E+ G P+ + EV + + P P ++Y
Sbjct: 211 KFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVY----- 265
Query: 398 ELIEECWNEKPAKRPTFRQIITRLESINNS 427
+++ CW +P +R ++I L ++ +
Sbjct: 266 DVMLGCWQREPQQRLNIKEIYKILHALGKA 295
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 122/263 (46%), Gaps = 41/263 (15%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+VAVK + E S +R+ F +E ++++ +VV+ LG V++ P ++V E + GD
Sbjct: 46 RVAVKTVNESA-SLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD 103
Query: 237 LRAFLKRKGALKPST-------------AVRFALDIARGMNYLHENKPVPIIHRDLEPSD 283
L+++L+ +L+P ++ A +IA GM YL+ K +HRDL +
Sbjct: 104 LKSYLR---SLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARN 157
Query: 284 LYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEY 342
VA+ +K+ DFG+++ + R R++APE K+ +
Sbjct: 158 CMVAH-----------DFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVF 206
Query: 343 DTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKEL 399
T D++SF ++L E+ P+ + +V K P P ++ +L
Sbjct: 207 TTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERV-----TDL 261
Query: 400 IEECWNEKPAKRPTFRQIITRLE 422
+ CW P RPTF +I+ L+
Sbjct: 262 MRMCWQFNPKMRPTFLEIVNLLK 284
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 122/263 (46%), Gaps = 41/263 (15%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+VAVK + E S +R+ F +E ++++ +VV+ LG V++ P ++V E + GD
Sbjct: 49 RVAVKTVNESA-SLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD 106
Query: 237 LRAFLKRKGALKPST-------------AVRFALDIARGMNYLHENKPVPIIHRDLEPSD 283
L+++L+ +L+P ++ A +IA GM YL+ K +HRDL +
Sbjct: 107 LKSYLR---SLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARN 160
Query: 284 LYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEY 342
VA+ +K+ DFG+++ + R R++APE K+ +
Sbjct: 161 CMVAH-----------DFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVF 209
Query: 343 DTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKEL 399
T D++SF ++L E+ P+ + +V K P P ++ +L
Sbjct: 210 TTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERV-----TDL 264
Query: 400 IEECWNEKPAKRPTFRQIITRLE 422
+ CW P RPTF +I+ L+
Sbjct: 265 MRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 95/191 (49%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 126
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 172
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K + + R T T Y+APE+ ++ Y+ VD ++ ++
Sbjct: 173 LLIDQQGYIQVTDFGFAKRV---KGRTWTLCGTP-EYLAPEIILSKGYNKAVDWWALGVL 228
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 229 IYEMAAGYPPF 239
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 95/191 (49%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 52 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 111
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 112 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPE-----------N 157
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K + + R T T Y+APE+ ++ Y+ VD ++ ++
Sbjct: 158 LLIDQQGYIQVTDFGFAKRV---KGRTWTLCGTP-EYLAPEIILSKGYNKAVDWWALGVL 213
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 214 IYEMAAGYPPF 224
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 66 GNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 171
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 172 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 28/207 (13%)
Query: 166 GTFILAFWRGIQVAVKKLGEEV-ISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + VAVKKL V I+ ++ + F E+ ++ K +H N+V+ LG +
Sbjct: 45 GVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDD 104
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPST---AVRFALDIARGMNYLHENKPVPIIHRDLEP 281
+ +V Y+P G L L P + + A A G+N+LHEN IHRD++
Sbjct: 105 LCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKS 161
Query: 282 SDLYVAYWQNDRNILRDDSGNLKVADFGVSK-----LLTVKEDRPLTCQDTSCRYVAPEV 336
+ NIL D++ K++DFG+++ TV R + + Y+APE
Sbjct: 162 A-----------NILLDEAFTAKISDFGLARASEKFAQTVMXSRIV----GTTAYMAPEA 206
Query: 337 FKNEEYDTKVDVFSFALILQEMIEGCP 363
+ E K D++SF ++L E+I G P
Sbjct: 207 LRG-EITPKSDIYSFGVVLLEIITGLP 232
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 122/263 (46%), Gaps = 41/263 (15%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+VAVK + E S +R+ F +E ++++ +VV+ LG V++ P ++V E + GD
Sbjct: 49 RVAVKTVNESA-SLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD 106
Query: 237 LRAFLKRKGALKPST-------------AVRFALDIARGMNYLHENKPVPIIHRDLEPSD 283
L+++L+ +L+P ++ A +IA GM YL+ K +HRDL +
Sbjct: 107 LKSYLR---SLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARN 160
Query: 284 LYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEY 342
VA+ +K+ DFG+++ + R R++APE K+ +
Sbjct: 161 CMVAH-----------DFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVF 209
Query: 343 DTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKEL 399
T D++SF ++L E+ P+ + +V K P P + + +L
Sbjct: 210 TTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPER-----VTDL 264
Query: 400 IEECWNEKPAKRPTFRQIITRLE 422
+ CW P RPTF +I+ L+
Sbjct: 265 MRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 66 GNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 171
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 172 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 126
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 172
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 173 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 229 IYEMAAGYPPF 239
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 66 GNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 171
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 172 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 108/265 (40%), Gaps = 59/265 (22%)
Query: 207 IRHPNVVQFLGA---VTQSSPM--MIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIAR 261
+ H N+ +F+ VT M ++V EY P G L +L + S+ R A + R
Sbjct: 64 MEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSC-RLAHSVTR 122
Query: 262 GMNYLHENKPV------PIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLT 315
G+ YLH P I HRDL N RN+L + G ++DFG+S LT
Sbjct: 123 GLAYLHTELPRGDHYKPAISHRDL-----------NSRNVLVKNDGTCVISDFGLSMRLT 171
Query: 316 V-------KEDRPLTCQDTSCRYVAPEVFKN-------EEYDTKVDVFSFALILQEMIEG 361
+ED + + RY+APEV + E +VD+++ LI E+
Sbjct: 172 GNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMR 231
Query: 362 C---------PPFTMKHDNEVPK----------AYAARQRPPFKAPAK---LYARGLKEL 399
C P + M EV +QRP F K L R LKE
Sbjct: 232 CTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKET 291
Query: 400 IEECWNEKPAKRPTFRQIITRLESI 424
IE+CW++ R T + R+ +
Sbjct: 292 IEDCWDQDAEARLTAQXAEERMAEL 316
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 171
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 172 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 117/277 (42%), Gaps = 54/277 (19%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLPK 234
IQVAVK L E+ +D A EL ++ ++ H N+V LGA T S P+ ++ EY
Sbjct: 76 IQVAVKMLKEK--ADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCY 133
Query: 235 GDLRAFLKRK-----------------------GALKPSTAVRFALDIARGMNYLHENKP 271
GDL +L+ K L + FA +A+GM +L
Sbjct: 134 GDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC 193
Query: 272 VPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS--- 328
V HRDL RN+L +K+ DFG+++ + D + +
Sbjct: 194 V---HRDLAA-----------RNVLVTHGKVVKICDFGLAR--DIMSDSNYVVRGNARLP 237
Query: 329 CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPP 384
+++APE Y K DV+S+ ++L E+ G P+ + D K + P
Sbjct: 238 VKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQP 297
Query: 385 FKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRL 421
F A ++Y +++ CW KRP+F + + L
Sbjct: 298 FYATEEIYI-----IMQSCWAFDSRKRPSFPNLTSFL 329
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 126
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 172
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 173 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 229 IYEMAAGYPPF 239
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 126
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 172
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 173 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 229 IYEMAAGYPPF 239
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 126 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPE-----------N 171
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 172 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 59 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 118
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 119 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 164
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 165 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 220
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 221 IYEMAAGYPPF 231
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 126
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPE-----------N 172
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 173 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 229 IYEMAAGYPPF 239
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 171
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 172 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 28/207 (13%)
Query: 166 GTFILAFWRGIQVAVKKLGEEV-ISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + VAVKKL V I+ ++ + F E+ ++ K +H N+V+ LG +
Sbjct: 45 GVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDD 104
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPST---AVRFALDIARGMNYLHENKPVPIIHRDLEP 281
+ +V Y+P G L L P + + A A G+N+LHEN IHRD++
Sbjct: 105 LCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKS 161
Query: 282 SDLYVAYWQNDRNILRDDSGNLKVADFGVSK-----LLTVKEDRPLTCQDTSCRYVAPEV 336
+ NIL D++ K++DFG+++ TV R + + Y+APE
Sbjct: 162 A-----------NILLDEAFTAKISDFGLARASEKFAQTVMXXRIV----GTTAYMAPEA 206
Query: 337 FKNEEYDTKVDVFSFALILQEMIEGCP 363
+ E K D++SF ++L E+I G P
Sbjct: 207 LRG-EITPKSDIYSFGVVLLEIITGLP 232
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 126 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 171
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 172 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 59 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 118
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 119 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 164
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 165 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 220
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 221 IYEMAAGYPPF 231
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 133/301 (44%), Gaps = 58/301 (19%)
Query: 166 GTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRD-ELALLQKIRHPNVVQFLGA----VT 220
G W G VAVK + S D FR+ E+ +RH N++ F+ +
Sbjct: 22 GEVWRGLWHGESVAVK-----IFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSRN 76
Query: 221 QSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLH------ENKPVPI 274
S+ + ++T Y G L FL+R+ L+P A+R A+ A G+ +LH + KP I
Sbjct: 77 SSTQLWLITHYHEHGSLYDFLQRQ-TLEPHLALRLAVSAACGLAHLHVEIFGTQGKPA-I 134
Query: 275 IHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD---TSCRY 331
HRD + RN+L + +AD G++ + + D + + RY
Sbjct: 135 AHRDFK-----------SRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRY 183
Query: 332 VAPEVFKNE------EYDTKVDVFSFALILQEM-----IEGC-----PPF--TMKHD--- 370
+APEV + E D+++F L+L E+ + G PPF + +D
Sbjct: 184 MAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPSF 243
Query: 371 NEVPKAYAARQRPPFKAPAKLYA----RGLKELIEECWNEKPAKRPTFRQIITRLESINN 426
++ K Q+ P P +L A GL +++ ECW P+ R T +I L+ I+N
Sbjct: 244 EDMKKVVCVDQQTP-TIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQKISN 302
Query: 427 S 427
S
Sbjct: 303 S 303
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 171
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 172 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 126
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 127 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 172
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 173 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 229 IYEMAAGYPPF 239
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 87 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 146
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 147 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 192
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 193 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 248
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 249 IYEMAAGYPPF 259
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 108/244 (44%), Gaps = 24/244 (9%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLG---AVTQSSPM-MIVTEYLP 233
VAVK L ++ D FR E + HP +V A T + P+ IV EY+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDR 293
LR + +G + P A+ D + +N+ H+N IIHRD++P+
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA----------- 145
Query: 294 NILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT--SCRYVAPEVFKNEEYDTKVDVFSF 351
NI+ + +KV DFG+++ + + + +Y++PE + + D + DV+S
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 352 ALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKR 411
+L E++ G PPFT + V AY + P P GL ++ + AK
Sbjct: 206 GCVLYEVLTGEPPFTGDSPDSV--AYQHVREDPI--PPSARHEGLSADLDAVVLKALAKN 261
Query: 412 PTFR 415
P R
Sbjct: 262 PENR 265
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPG 126
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P +L +
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMI-------- 175
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
D G +KV DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 176 ---DQQGYIKVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 229 IYEMAAGYPPF 239
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + + +E +LQ + P +V+ + +S + +V EY P
Sbjct: 66 GNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P +L +
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMI-------- 174
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
D G +KV DFG++K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 175 ---DQQGYIKVTDFGLAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P +L +
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMI-------- 174
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
D G +KV DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 175 ---DQQGYIKVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P +L +
Sbjct: 126 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMI-------- 174
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
D G +KV DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 175 ---DQQGYIKVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 126/277 (45%), Gaps = 39/277 (14%)
Query: 161 VEITKGTFILAFWRGIQVAVKKLGEEVISD--DDRVRAFRDELALLQKI-RHPNVVQFLG 217
VE+ ++G V +L + D D + E+ +L+K H N+ + G
Sbjct: 29 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYG 88
Query: 218 AVTQSSP------MMIVTEYLPKGDLRAFLK--RKGALKPSTAVRFALDIARGMNYLHEN 269
A + +P + +V E+ G + +K + LK +I RG+++LH++
Sbjct: 89 AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH 148
Query: 270 KPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT-- 327
K +IHRD++ +N+L ++ +K+ DFGVS L DR + ++T
Sbjct: 149 K---VIHRDIK-----------GQNVLLTENAEVKLVDFGVSAQL----DRTVGRRNTFI 190
Query: 328 -SCRYVAPEVFKNEE-----YDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQ 381
+ ++APEV +E YD K D++S + EM EG PP H + + +
Sbjct: 191 GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH--PMRALFLIPR 248
Query: 382 RPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
P + +K +++ + IE C + ++RP Q++
Sbjct: 249 NPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLM 285
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 122/263 (46%), Gaps = 41/263 (15%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+VAVK + E S +R+ F +E ++++ +VV+ LG V++ P ++V E + GD
Sbjct: 49 RVAVKTVNESA-SLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD 106
Query: 237 LRAFLKRKGALKPST-------------AVRFALDIARGMNYLHENKPVPIIHRDLEPSD 283
L+++L+ +L+P ++ A +IA GM YL+ K +HRDL +
Sbjct: 107 LKSYLR---SLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARN 160
Query: 284 LYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEY 342
VA+ +K+ DFG+++ + R R++APE K+ +
Sbjct: 161 CMVAH-----------DFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVF 209
Query: 343 DTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKEL 399
T D++SF ++L E+ P+ + +V K P P ++ +L
Sbjct: 210 TTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERV-----TDL 264
Query: 400 IEECWNEKPAKRPTFRQIITRLE 422
+ CW P RPTF +I+ L+
Sbjct: 265 MRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 122/263 (46%), Gaps = 41/263 (15%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+VAVK + E S +R+ F +E ++++ +VV+ LG V++ P ++V E + GD
Sbjct: 48 RVAVKTVNESA-SLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD 105
Query: 237 LRAFLKRKGALKPST-------------AVRFALDIARGMNYLHENKPVPIIHRDLEPSD 283
L+++L+ +L+P ++ A +IA GM YL+ K +HRDL +
Sbjct: 106 LKSYLR---SLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARN 159
Query: 284 LYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEY 342
VA+ +K+ DFG+++ + R R++APE K+ +
Sbjct: 160 CMVAH-----------DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVF 208
Query: 343 DTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKEL 399
T D++SF ++L E+ P+ + +V K P P ++ +L
Sbjct: 209 TTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERV-----TDL 263
Query: 400 IEECWNEKPAKRPTFRQIITRLE 422
+ CW P RPTF +I+ L+
Sbjct: 264 MRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E + Q + P +V+ + +S + +V EY P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPG 126
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPE-----------N 172
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G +KVADFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 173 LLIDQQGYIKVADFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 229 IYEMAAGYPPF 239
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 122/263 (46%), Gaps = 41/263 (15%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+VAVK + E S +R+ F +E ++++ +VV+ LG V++ P ++V E + GD
Sbjct: 49 RVAVKTVNESA-SLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD 106
Query: 237 LRAFLKRKGALKPST-------------AVRFALDIARGMNYLHENKPVPIIHRDLEPSD 283
L+++L+ +L+P ++ A +IA GM YL+ K +HRDL +
Sbjct: 107 LKSYLR---SLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARN 160
Query: 284 LYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEY 342
VA+ +K+ DFG+++ + R R++APE K+ +
Sbjct: 161 CMVAH-----------DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVF 209
Query: 343 DTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKEL 399
T D++SF ++L E+ P+ + +V K P P ++ +L
Sbjct: 210 TTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERV-----TDL 264
Query: 400 IEECWNEKPAKRPTFRQIITRLE 422
+ CW P RPTF +I+ L+
Sbjct: 265 MRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 16/199 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L + + DRVR + E +L + HP VV+ A + ++ ++L
Sbjct: 56 GHLYAMKVLKKATLKVRDRVRT-KMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRG 114
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
GDL L ++ + ++A G+++LH + II+RDL+P N
Sbjct: 115 GDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHS---LGIIYRDLKPE-----------N 160
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
IL D+ G++K+ DFG+SK E + + T Y+APEV + + D +S+ ++
Sbjct: 161 ILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGT-VEYMAPEVVNRQGHSHSADWWSYGVL 219
Query: 355 LQEMIEGCPPFTMKHDNEV 373
+ EM+ G PF K E
Sbjct: 220 MFEMLTGSLPFQGKDRKET 238
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 129/310 (41%), Gaps = 36/310 (11%)
Query: 137 MHVKHAREVPEYEIDPHELDFTNSVEITKGTFILAF----WRGIQVAVKKLGEEVISDDD 192
+H+ + E+ +F N + +G F + G VAVK+L EE +
Sbjct: 12 VHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGE 71
Query: 193 RVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPS-- 250
F+ E+ ++ H N+++ G + ++V Y+ G + + L+ + +P
Sbjct: 72 L--QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLD 129
Query: 251 --TAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADF 308
R AL ARG+ YLH++ IIHRD++ + NIL D+ V DF
Sbjct: 130 WPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAA-----------NILLDEEFEAVVGDF 178
Query: 309 GVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFT-- 366
G++KL+ K+ ++APE + K DVF + ++L E+I G F
Sbjct: 179 GLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLA 238
Query: 367 -MKHDNEV-----PKAYAARQRPPFKAPAKLYARGLKELIEE-------CWNEKPAKRPT 413
+ +D++V K ++ L E +E+ C P +RP
Sbjct: 239 RLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPK 298
Query: 414 FRQIITRLES 423
+++ LE
Sbjct: 299 MSEVVRMLEG 308
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 29/235 (12%)
Query: 196 AFRDELA----LLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPST 251
A +DEL ++Q++ +P +V+ +G + ++ M+V E G L +L++ +K
Sbjct: 50 ALKDELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKN 108
Query: 252 AVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVS 311
+ ++ GM YL E+ +HRDL RN+L K++DFG+S
Sbjct: 109 IIELVHQVSMGMKYLEESN---FVHRDLAA-----------RNVLLVTQHYAKISDFGLS 154
Query: 312 KLLTVKED--RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMK 368
K L E+ + T ++ APE ++ +K DV+SF +++ E G P+
Sbjct: 155 KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 214
Query: 369 HDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRL 421
+EV R P P ++Y +L+ CW RP F + RL
Sbjct: 215 KGSEVTAMLEKGERMGCPAGCPREMY-----DLMNLCWTYDVENRPGFAAVELRL 264
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 106/237 (44%), Gaps = 29/237 (12%)
Query: 196 AFRDELA----LLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPST 251
A +DEL ++Q++ +P +V+ +G + ++ M+V E G L +L++ +K
Sbjct: 54 ALKDELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKN 112
Query: 252 AVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVS 311
+ ++ GM YL E+ +HRDL RN+L K++DFG+S
Sbjct: 113 IIELVHQVSMGMKYLEESN---FVHRDLAA-----------RNVLLVTQHYAKISDFGLS 158
Query: 312 KLLTVKED--RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMK 368
K L E+ + T ++ APE ++ +K DV+SF +++ E G P+
Sbjct: 159 KALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 218
Query: 369 HDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 423
+EV R P P ++Y +L+ CW RP F + RL +
Sbjct: 219 KGSEVTAMLEKGERMGCPAGCPREMY-----DLMNLCWTYDVENRPGFAAVELRLRN 270
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 116/244 (47%), Gaps = 20/244 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G +VA++++ + + +E+ ++++ ++PN+V +L + + +V EYL
Sbjct: 45 GQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 101
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G L + + + + + +LH N+ +IHRD++ SD N
Sbjct: 102 GSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIK-SD----------N 146
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
IL G++K+ DFG +T ++ + T T ++APEV + Y KVD++S ++
Sbjct: 147 ILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTP-YWMAPEVVTRKAYGPKVDIWSLGIM 205
Query: 355 LQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTF 414
EMIEG PP+ ++ A P + P KL A ++ + C + KR +
Sbjct: 206 AIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI-FRDFLNRCLDMDVEKRGSA 264
Query: 415 RQII 418
++++
Sbjct: 265 KELL 268
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 29/235 (12%)
Query: 196 AFRDELA----LLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPST 251
A +DEL ++Q++ +P +V+ +G + ++ M+V E G L +L++ +K
Sbjct: 48 ALKDELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKN 106
Query: 252 AVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVS 311
+ ++ GM YL E+ +HRDL RN+L K++DFG+S
Sbjct: 107 IIELVHQVSMGMKYLEESN---FVHRDLAA-----------RNVLLVTQHYAKISDFGLS 152
Query: 312 KLLTVKED--RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMK 368
K L E+ + T ++ APE ++ +K DV+SF +++ E G P+
Sbjct: 153 KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 212
Query: 369 HDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRL 421
+EV R P P ++Y +L+ CW RP F + RL
Sbjct: 213 KGSEVTAMLEKGERMGCPAGCPREMY-----DLMNLCWTYDVENRPGFAAVELRL 262
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 122/282 (43%), Gaps = 31/282 (10%)
Query: 150 IDPHELDFTNSV-EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIR 208
ID +L+F + E G W+G + VK L S + R F +E L+
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTR-KSRDFNEECPRLRIFS 65
Query: 209 HPNVVQFLGAVTQSSPM---MIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGM 263
HPNV+ LGA QS P ++T + P G L L + S AV+FALD ARG
Sbjct: 66 HPNVLPVLGAC-QSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGX 124
Query: 264 NYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLT 323
+LH LEP L + N R++ D+ +++ VK
Sbjct: 125 AFLHT----------LEP--LIPRHALNSRSVXIDEDXTARIS------XADVKFSFQSP 166
Query: 324 CQDTSCRYVAPEVFKNEEYDT---KVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAAR 380
+ + +VAPE + + DT D +SFA++L E++ PF + E+ A
Sbjct: 167 GRXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALE 226
Query: 381 QRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLE 422
P P + + +L + C NE PAKRP F I+ LE
Sbjct: 227 GLRPTIPPG--ISPHVSKLXKICXNEDPAKRPKFDXIVPILE 266
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 106/237 (44%), Gaps = 29/237 (12%)
Query: 196 AFRDELA----LLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPST 251
A +DEL ++Q++ +P +V+ +G + ++ M+V E G L +L++ +K
Sbjct: 54 ALKDELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKN 112
Query: 252 AVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVS 311
+ ++ GM YL E+ +HRDL RN+L K++DFG+S
Sbjct: 113 IIELVHQVSMGMKYLEESN---FVHRDLAA-----------RNVLLVTQHYAKISDFGLS 158
Query: 312 KLLTVKED--RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMK 368
K L E+ + T ++ APE ++ +K DV+SF +++ E G P+
Sbjct: 159 KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 218
Query: 369 HDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 423
+EV R P P ++Y +L+ CW RP F + RL +
Sbjct: 219 KGSEVTAMLEKGERMGCPAGCPREMY-----DLMNLCWTYDVENRPGFAAVELRLRN 270
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 29/235 (12%)
Query: 196 AFRDELA----LLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPST 251
A +DEL ++Q++ +P +V+ +G + ++ M+V E G L +L++ +K
Sbjct: 60 ALKDELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKN 118
Query: 252 AVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVS 311
+ ++ GM YL E+ +HRDL RN+L K++DFG+S
Sbjct: 119 IIELVHQVSMGMKYLEESN---FVHRDLAA-----------RNVLLVTQHYAKISDFGLS 164
Query: 312 KLLTVKED--RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMK 368
K L E+ + T ++ APE ++ +K DV+SF +++ E G P+
Sbjct: 165 KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 224
Query: 369 HDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRL 421
+EV R P P ++Y +L+ CW RP F + RL
Sbjct: 225 KGSEVTAMLEKGERMGCPAGCPREMY-----DLMNLCWTYDVENRPGFAAVELRL 274
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 29/235 (12%)
Query: 196 AFRDELA----LLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPST 251
A +DEL ++Q++ +P +V+ +G + ++ M+V E G L +L++ +K
Sbjct: 68 ALKDELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKN 126
Query: 252 AVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVS 311
+ ++ GM YL E+ +HRDL RN+L K++DFG+S
Sbjct: 127 IIELVHQVSMGMKYLEESN---FVHRDLAA-----------RNVLLVTQHYAKISDFGLS 172
Query: 312 KLLTVKED--RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMK 368
K L E+ + T ++ APE ++ +K DV+SF +++ E G P+
Sbjct: 173 KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 232
Query: 369 HDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRL 421
+EV R P P ++Y +L+ CW RP F + RL
Sbjct: 233 KGSEVTAMLEKGERMGCPAGCPREMY-----DLMNLCWTYDVENRPGFAAVELRL 282
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRA-FLKRKGALKPSTAVRFALD 258
E+ +L HPN+V+ L A + + I+ E+ G + A L+ + L S
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 259 IARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKE 318
+NYLH+NK IIHRDL+ NIL G++K+ADFGVS K
Sbjct: 144 TLDALNYLHDNK---IIHRDLKAG-----------NILFTLDGDIKLADFGVS----AKN 185
Query: 319 DRPLTCQDT---SCRYVAPEVF-----KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHD 370
R + +D+ + ++APEV K+ YD K DV+S + L EM E PP +
Sbjct: 186 TRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNP 245
Query: 371 NEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
V A + P P++ ++ K+ +++C + R T Q++
Sbjct: 246 MRVLLKIAKSEPPTLAQPSR-WSSNFKDFLKKCLEKNVDARWTTSQLL 292
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 97/190 (51%), Gaps = 20/190 (10%)
Query: 178 VAVKK--LGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
VA+KK LG + D R E+ LLQ++ HPN++ L A S + +V +++ +
Sbjct: 38 VAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ET 96
Query: 236 DLRAFLKRKG-ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
DL +K L PS + L +G+ YLH++ I+HRDL+P+ N
Sbjct: 97 DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPN-----------N 142
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPE-VFKNEEYDTKVDVFSFAL 353
+L D++G LK+ADFG++K +R Q + Y APE +F Y VD+++
Sbjct: 143 LLLDENGVLKLADFGLAKSFG-SPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGC 201
Query: 354 ILQEMIEGCP 363
IL E++ P
Sbjct: 202 ILAELLLRVP 211
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 29/235 (12%)
Query: 196 AFRDELA----LLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPST 251
A +DEL ++Q++ +P +V+ +G + ++ M+V E G L +L++ +K
Sbjct: 70 ALKDELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKN 128
Query: 252 AVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVS 311
+ ++ GM YL E+ +HRDL RN+L K++DFG+S
Sbjct: 129 IIELVHQVSMGMKYLEESN---FVHRDLAA-----------RNVLLVTQHYAKISDFGLS 174
Query: 312 KLLTVKED--RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMK 368
K L E+ + T ++ APE ++ +K DV+SF +++ E G P+
Sbjct: 175 KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 234
Query: 369 HDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRL 421
+EV R P P ++Y +L+ CW RP F + RL
Sbjct: 235 KGSEVTAMLEKGERMGCPAGCPREMY-----DLMNLCWTYDVENRPGFAAVELRL 284
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 29/235 (12%)
Query: 196 AFRDELA----LLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPST 251
A +DEL ++Q++ +P +V+ +G + ++ M+V E G L +L++ +K
Sbjct: 70 ALKDELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKN 128
Query: 252 AVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVS 311
+ ++ GM YL E+ +HRDL RN+L K++DFG+S
Sbjct: 129 IIELVHQVSMGMKYLEESN---FVHRDLAA-----------RNVLLVTQHYAKISDFGLS 174
Query: 312 KLLTVKED--RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMK 368
K L E+ + T ++ APE ++ +K DV+SF +++ E G P+
Sbjct: 175 KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 234
Query: 369 HDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRL 421
+EV R P P ++Y +L+ CW RP F + RL
Sbjct: 235 KGSEVTAMLEKGERMGCPAGCPREMY-----DLMNLCWTYDVENRPGFAAVELRL 284
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRA-FLKRKGALKPSTAVRFALD 258
E+ +L HPN+V+ L A + + I+ E+ G + A L+ + L S
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 259 IARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKE 318
+NYLH+NK IIHRDL+ NIL G++K+ADFGVS K
Sbjct: 144 TLDALNYLHDNK---IIHRDLKAG-----------NILFTLDGDIKLADFGVS----AKN 185
Query: 319 DRPLTCQDT---SCRYVAPEVF-----KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHD 370
R + +D+ + ++APEV K+ YD K DV+S + L EM E PP +
Sbjct: 186 TRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNP 245
Query: 371 NEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
V A + P P++ ++ K+ +++C + R T Q++
Sbjct: 246 MRVLLKIAKSEPPTLAQPSR-WSSNFKDFLKKCLEKNVDARWTTSQLL 292
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P +L +
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMI-------- 174
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 175 ---DQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 23/227 (10%)
Query: 200 ELALLQKIRHPNVVQFLGAVT--QSSPMMIVTEYLPKGDLRAFL----KRKGALKPSTAV 253
E+ LL++++HPN+V++ + ++ + IV EY GDL + + K + L +
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 254 RFALDIARGMNYLH--ENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVS 311
R + + H + ++HRDL+P+ N+ D N+K+ DFG++
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPA-----------NVFLDGKQNVKLGDFGLA 163
Query: 312 KLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDN 371
++L ED T Y++PE Y+ K D++S +L E+ PPFT
Sbjct: 164 RILNHDEDFAKEFVGTP-YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK 222
Query: 372 EVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
E+ A R+ + P + Y+ L E+I N K RP+ +I+
Sbjct: 223 EL--AGKIREGKFRRIPYR-YSDELNEIITRMLNLKDYHRPSVEEIL 266
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + + +E +LQ + P +V+ + +S + +V EY P
Sbjct: 66 GNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P +L +
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMI-------- 174
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
D G ++V DFG++K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 175 ---DQQGYIQVTDFGLAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 128/287 (44%), Gaps = 35/287 (12%)
Query: 154 ELDFTNSVEITKGTFILAFWRGIQVAVK--KLGEEVISDDDRVRAFRDELALLQKIRHPN 211
EL N + +G + + + I VA+K K G E ++ +R E ++ ++ +P
Sbjct: 17 ELGCGNFGSVRQGVYRMRK-KQIDVAIKVLKQGTEKADTEEMMR----EAQIMHQLDNPY 71
Query: 212 VVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFAL-DIARGMNYLHENK 270
+V+ +G V Q+ +M+V E G L FL K P + V L ++ GM YL E
Sbjct: 72 IVRLIG-VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN 130
Query: 271 PVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-- 328
+HRDL RN+L + K++DFG+SK L +D T +
Sbjct: 131 ---FVHRDLAA-----------RNVLLVNRHYAKISDFGLSKALGA-DDSYYTARSAGKW 175
Query: 329 -CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQRPP 384
++ APE ++ ++ DV+S+ + + E + G P+ EV R P
Sbjct: 176 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECP 235
Query: 385 FKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSINHK 431
+ P +LYA L+ +CW K RP F + R+ + S+ K
Sbjct: 236 PECPPELYA-----LMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 277
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 107/260 (41%), Gaps = 56/260 (21%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
EL +L + P +V F GA + I E++ G L LK+ G + + ++ +
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+G+ YL E I+HRD++PS NIL + G +K+ DFGVS L D
Sbjct: 114 IKGLTYLREKH--KIMHRDVKPS-----------NILVNSRGEIKLCDFGVSGQLI---D 157
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEG---CPP---------FTM 367
+ Y++PE + Y + D++S L L EM G PP F
Sbjct: 158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGC 217
Query: 368 KHDNEVPK-------------AYAARQRPPF---------------KAPAKLYARGLKEL 399
+ + + + +Y RPP K P+ +++ ++
Sbjct: 218 QVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDF 277
Query: 400 IEECWNEKPAKRPTFRQIIT 419
+ +C + PA+R +Q++
Sbjct: 278 VNKCLIKNPAERADLKQLMV 297
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 107/260 (41%), Gaps = 56/260 (21%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
EL +L + P +V F GA + I E++ G L LK+ G + + ++ +
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+G+ YL E I+HRD++PS NIL + G +K+ DFGVS L D
Sbjct: 114 IKGLTYLREKH--KIMHRDVKPS-----------NILVNSRGEIKLCDFGVSGQLI---D 157
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEG---CPP---------FTM 367
+ Y++PE + Y + D++S L L EM G PP F
Sbjct: 158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGC 217
Query: 368 KHDNEVPK-------------AYAARQRPPF---------------KAPAKLYARGLKEL 399
+ + + + +Y RPP K P+ +++ ++
Sbjct: 218 QVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDF 277
Query: 400 IEECWNEKPAKRPTFRQIIT 419
+ +C + PA+R +Q++
Sbjct: 278 VNKCLIKNPAERADLKQLMV 297
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 119/271 (43%), Gaps = 45/271 (16%)
Query: 175 GIQVAVKKLGEEVISDDDRVRA-FRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEY 231
G VAVK L E ++R+ ++ E+ +L+ + H ++V++ G + +V EY
Sbjct: 38 GEMVAVKALKEGC---GPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY 94
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
+P G LR +L R + + + FA I GM YLH IHR L
Sbjct: 95 VPLGSLRDYLPRH-CVGLAQLLLFAQQICEGMAYLHAQH---YIHRALAA---------- 140
Query: 292 DRNILRDDSGNLKVADFGVSKLL-------TVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
RN+L D+ +K+ DFG++K + V+ED D+ + APE K ++
Sbjct: 141 -RNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED-----GDSPVFWYAPECLKECKFYY 194
Query: 345 KVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARG--------- 395
DV+SF + L E++ C H + + +L RG
Sbjct: 195 ASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRC 254
Query: 396 ---LKELIEECWNEKPAKRPTFRQIITRLES 423
+ L++ CW + + RPTF+ ++ L++
Sbjct: 255 PCEIYHLMKNCWETEASFRPTFQNLVPILQT 285
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 119/271 (43%), Gaps = 45/271 (16%)
Query: 175 GIQVAVKKLGEEVISDDDRVRA-FRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEY 231
G VAVK L E ++R+ ++ E+ +L+ + H ++V++ G + +V EY
Sbjct: 37 GEMVAVKALKEGC---GPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY 93
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
+P G LR +L R + + + FA I GM YLH IHR L
Sbjct: 94 VPLGSLRDYLPRH-CVGLAQLLLFAQQICEGMAYLHAQH---YIHRALAA---------- 139
Query: 292 DRNILRDDSGNLKVADFGVSKLL-------TVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
RN+L D+ +K+ DFG++K + V+ED D+ + APE K ++
Sbjct: 140 -RNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED-----GDSPVFWYAPECLKECKFYY 193
Query: 345 KVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARG--------- 395
DV+SF + L E++ C H + + +L RG
Sbjct: 194 ASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRC 253
Query: 396 ---LKELIEECWNEKPAKRPTFRQIITRLES 423
+ L++ CW + + RPTF+ ++ L++
Sbjct: 254 PCEIYHLMKNCWETEASFRPTFQNLVPILQT 284
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P + + + +S + +V EY P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPG 126
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P +L +
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMI-------- 175
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
D G +KV DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 176 ---DQQGYIKVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 229 IYEMAAGYPPF 239
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P + + + +S + +V EY P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPG 126
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P +L +
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMI-------- 175
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
D G +KV DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 176 ---DQQGYIKVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 229 IYEMAAGYPPF 239
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 115/244 (47%), Gaps = 20/244 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G +VA++++ + + +E+ ++++ ++PN+V +L + + +V EYL
Sbjct: 46 GQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 102
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G L + + + + + +LH N+ +IHR+++ SD N
Sbjct: 103 GSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQ---VIHRNIK-SD----------N 147
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
IL G++K+ DFG +T ++ + T T ++APEV + Y KVD++S ++
Sbjct: 148 ILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTP-YWMAPEVVTRKAYGPKVDIWSLGIM 206
Query: 355 LQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTF 414
EMIEG PP+ ++ A P + P KL A ++ + C KR +
Sbjct: 207 AIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI-FRDFLNRCLEMDVEKRGSA 265
Query: 415 RQII 418
+++I
Sbjct: 266 KELI 269
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 107/260 (41%), Gaps = 56/260 (21%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
EL +L + P +V F GA + I E++ G L LK+ G + + ++ +
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+G+ YL E I+HRD++PS NIL + G +K+ DFGVS L D
Sbjct: 114 IKGLTYLREKH--KIMHRDVKPS-----------NILVNSRGEIKLCDFGVSGQLI---D 157
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEG---CPP---------FTM 367
+ Y++PE + Y + D++S L L EM G PP F
Sbjct: 158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGC 217
Query: 368 KHDNEVPK-------------AYAARQRPPF---------------KAPAKLYARGLKEL 399
+ + + + +Y RPP K P+ +++ ++
Sbjct: 218 QVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDF 277
Query: 400 IEECWNEKPAKRPTFRQIIT 419
+ +C + PA+R +Q++
Sbjct: 278 VNKCLIKNPAERADLKQLMV 297
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P + + + +S + +V EY P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPG 126
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P +L +
Sbjct: 127 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMI-------- 175
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
D G +KV DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 176 ---DQQGYIKVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 229 IYEMAAGYPPF 239
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 166 GTFILAFWRGIQVAVKKLGEEV-ISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + VAVKKL V I+ ++ + F E+ ++ K +H N+V+ LG +
Sbjct: 39 GVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDD 98
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPST---AVRFALDIARGMNYLHENKPVPIIHRDLEP 281
+ +V Y+P G L L P + + A A G+N+LHEN IHRD++
Sbjct: 99 LCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKS 155
Query: 282 SDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT-SCRYVAPEVFKNE 340
+ NIL D++ K++DFG+++ + + + Y+APE +
Sbjct: 156 A-----------NILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRG- 203
Query: 341 EYDTKVDVFSFALILQEMIEGCP 363
E K D++SF ++L E+I G P
Sbjct: 204 EITPKSDIYSFGVVLLEIITGLP 226
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 107/260 (41%), Gaps = 56/260 (21%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
EL +L + P +V F GA + I E++ G L LK+ G + + ++ +
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+G+ YL E I+HRD++PS NIL + G +K+ DFGVS L D
Sbjct: 114 IKGLTYLREKH--KIMHRDVKPS-----------NILVNSRGEIKLCDFGVSGQLI---D 157
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEG---CPP---------FTM 367
+ Y++PE + Y + D++S L L EM G PP F
Sbjct: 158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGC 217
Query: 368 KHDNEVPK-------------AYAARQRPPF---------------KAPAKLYARGLKEL 399
+ + + + +Y RPP K P+ +++ ++
Sbjct: 218 QVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDF 277
Query: 400 IEECWNEKPAKRPTFRQIIT 419
+ +C + PA+R +Q++
Sbjct: 278 VNKCLIKNPAERADLKQLMV 297
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 29/235 (12%)
Query: 196 AFRDEL----ALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPST 251
A +DEL ++Q++ +P +V+ +G + ++ M+V E G L +L++ +K
Sbjct: 413 ALKDELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKN 471
Query: 252 AVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVS 311
+ ++ GM YL E+ +HRDL RN+L K++DFG+S
Sbjct: 472 IIELVHQVSMGMKYLEESN---FVHRDLAA-----------RNVLLVTQHYAKISDFGLS 517
Query: 312 KLLTVKED--RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMK 368
K L E+ + T ++ APE ++ +K DV+SF +++ E G P+
Sbjct: 518 KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 577
Query: 369 HDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRL 421
+EV R P P ++Y +L+ CW RP F + RL
Sbjct: 578 KGSEVTAMLEKGERMGCPAGCPREMY-----DLMNLCWTYDVENRPGFAAVELRL 627
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 53 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 112
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 113 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPE-----------N 158
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D+ G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 159 LLIDEQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 214
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 215 IYEMAAGYPPF 225
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 28/228 (12%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRA-FLKRKGALKPSTAVRFALD 258
E+ +L HPN+V+ L A + + I+ E+ G + A L+ + L S
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 259 IARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKE 318
+NYLH+NK IIHRDL+ NIL G++K+ADFGVS K
Sbjct: 144 TLDALNYLHDNK---IIHRDLKAG-----------NILFTLDGDIKLADFGVS----AKN 185
Query: 319 DRPLTCQDT---SCRYVAPEVF-----KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHD 370
R + +D + ++APEV K+ YD K DV+S + L EM E PP +
Sbjct: 186 TRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNP 245
Query: 371 NEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
V A + P P++ ++ K+ +++C + R T Q++
Sbjct: 246 MRVLLKIAKSEPPTLAQPSR-WSSNFKDFLKKCLEKNVDARWTTSQLL 292
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 29/207 (14%)
Query: 175 GIQVAVK--KLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYL 232
G+ VA+K KL E + +R E++L+++++H N+V+ + + + +V E++
Sbjct: 30 GVYVALKEVKLDSEEGTPSTAIR----EISLMKELKHENIVRLYDVIHTENKLTLVFEFM 85
Query: 233 PKGDLRAFLKRKG------ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYV 286
DL+ ++ + L+ + F + +G+ + HENK I+HRDL+P
Sbjct: 86 -DNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKP----- 136
Query: 287 AYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVF-KNEEYDTK 345
+N+L + G LK+ DFG+++ + + + + + Y AP+V + Y T
Sbjct: 137 ------QNLLINKRGQLKLGDFGLARAFGIPVNT-FSSEVVTLWYRAPDVLMGSRTYSTS 189
Query: 346 VDVFSFALILQEMIEGCPPFTMKHDNE 372
+D++S IL EMI G P F +D E
Sbjct: 190 IDIWSCGCILAEMITGKPLFPGTNDEE 216
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 122/263 (46%), Gaps = 41/263 (15%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+VAVK + E S +R+ F +E ++++ +VV+ LG V++ P ++V E + GD
Sbjct: 50 RVAVKTVNESA-SLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD 107
Query: 237 LRAFLKRKGALKPST-------------AVRFALDIARGMNYLHENKPVPIIHRDLEPSD 283
L+++L+ +L+P ++ A +IA GM YL+ K +HR+L +
Sbjct: 108 LKSYLR---SLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARN 161
Query: 284 LYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEY 342
VA+ +K+ DFG+++ + R R++APE K+ +
Sbjct: 162 CMVAH-----------DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVF 210
Query: 343 DTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKEL 399
T D++SF ++L E+ P+ + +V K P P + + +L
Sbjct: 211 TTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPER-----VTDL 265
Query: 400 IEECWNEKPAKRPTFRQIITRLE 422
+ CW P RPTF +I+ L+
Sbjct: 266 MRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 114/244 (46%), Gaps = 20/244 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G +VA++++ + + +E+ ++++ ++PN+V +L + + +V EYL
Sbjct: 46 GQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 102
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G L + + + + + +LH N+ +IHRD++ SD N
Sbjct: 103 GSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIK-SD----------N 147
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
IL G++K+ DFG +T ++ + T ++APEV + Y KVD++S ++
Sbjct: 148 ILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTP-YWMAPEVVTRKAYGPKVDIWSLGIM 206
Query: 355 LQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTF 414
EMIEG PP+ ++ A P + P KL A ++ + C KR +
Sbjct: 207 AIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI-FRDFLNRCLEMDVEKRGSA 265
Query: 415 RQII 418
+++I
Sbjct: 266 KELI 269
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 122/263 (46%), Gaps = 41/263 (15%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+VAVK + E S +R+ F +E ++++ +VV+ LG V++ P ++V E + GD
Sbjct: 49 RVAVKTVNESA-SLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD 106
Query: 237 LRAFLKRKGALKPST-------------AVRFALDIARGMNYLHENKPVPIIHRDLEPSD 283
L+++L+ +L+P ++ A +IA GM YL+ K +HR+L +
Sbjct: 107 LKSYLR---SLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARN 160
Query: 284 LYVAYWQNDRNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEY 342
VA+ +K+ DFG+++ + R R++APE K+ +
Sbjct: 161 CMVAH-----------DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVF 209
Query: 343 DTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKEL 399
T D++SF ++L E+ P+ + +V K P P + + +L
Sbjct: 210 TTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPER-----VTDL 264
Query: 400 IEECWNEKPAKRPTFRQIITRLE 422
+ CW P RPTF +I+ L+
Sbjct: 265 MRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 29/235 (12%)
Query: 196 AFRDEL----ALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPST 251
A +DEL ++Q++ +P +V+ +G + ++ M+V E G L +L++ +K
Sbjct: 412 ALKDELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKN 470
Query: 252 AVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVS 311
+ ++ GM YL E+ +HRDL RN+L K++DFG+S
Sbjct: 471 IIELVHQVSMGMKYLEESN---FVHRDLAA-----------RNVLLVTQHYAKISDFGLS 516
Query: 312 KLLTVKED--RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMK 368
K L E+ + T ++ APE ++ +K DV+SF +++ E G P+
Sbjct: 517 KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 576
Query: 369 HDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRL 421
+EV R P P ++Y +L+ CW RP F + RL
Sbjct: 577 KGSEVTAMLEKGERMGCPAGCPREMY-----DLMNLCWTYDVENRPGFAAVELRL 626
>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or265.
pdb|4HQD|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or265
Length = 169
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 61/107 (57%), Gaps = 5/107 (4%)
Query: 24 KEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQ 83
K A++N D DG L + A E E +K L+ G DVN +D D RT LH AA +
Sbjct: 59 KGADVNAKDSDGR-----TPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKE 113
Query: 84 GFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
G E+V LL+ +GADV+ D G TPL A + N E++KLLEK G
Sbjct: 114 GHKEIVKLLISKGADVNTSDSDGRTPLDLAREHGNEEIVKLLEKQGG 160
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
Query: 26 AELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGF 85
A++N D DG L + A E E +K L+ G DVN +D D RT LH AA +G
Sbjct: 28 ADVNASDSDGR-----TPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGH 82
Query: 86 TEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
E+V LL+ +GADV+ KD G TPL A + E++KLL GA
Sbjct: 83 KEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGA 127
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%)
Query: 43 RLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPK 102
RL+ A + + +K+L+++G DVN D D RT LH AA +G E+V LL+ +GADV+ K
Sbjct: 7 RLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAK 66
Query: 103 DRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
D G TPL A + E++KLL GA
Sbjct: 67 DSDGRTPLHYAAKEGHKEIVKLLISKGA 94
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 24/235 (10%)
Query: 179 AVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLR 238
A+K L + + DRVR + E +L ++ HP +V+ A + ++ ++L GDL
Sbjct: 57 AMKVLKKATLKVRDRVRT-KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLF 115
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRD 298
L ++ + ++A +++LH + II+RDL+P NIL D
Sbjct: 116 TRLSKEVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPE-----------NILLD 161
Query: 299 DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 358
+ G++K+ DFG+SK E + + T Y+APEV + D +SF +++ EM
Sbjct: 162 EEGHIKLTDFGLSKESIDHEKKAYSFCGT-VEYMAPEVVNRRGHTQSADWWSFGVLMFEM 220
Query: 359 IEGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKR 411
+ G PF K E A P F +P + L+ + PA R
Sbjct: 221 LTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEA------QSLLRMLFKRNPANR 269
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 24/235 (10%)
Query: 179 AVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLR 238
A+K L + + DRVR + E +L ++ HP +V+ A + ++ ++L GDL
Sbjct: 56 AMKVLKKATLKVRDRVRT-KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLF 114
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRD 298
L ++ + ++A +++LH + II+RDL+P NIL D
Sbjct: 115 TRLSKEVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPE-----------NILLD 160
Query: 299 DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 358
+ G++K+ DFG+SK E + + T Y+APEV + D +SF +++ EM
Sbjct: 161 EEGHIKLTDFGLSKESIDHEKKAYSFCGT-VEYMAPEVVNRRGHTQSADWWSFGVLMFEM 219
Query: 359 IEGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKR 411
+ G PF K E A P F +P + L+ + PA R
Sbjct: 220 LTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEA------QSLLRMLFKRNPANR 268
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 19/193 (9%)
Query: 179 AVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLR 238
A+K + ++ + + VR EL ++Q + HP +V + M +V + L GDLR
Sbjct: 44 AMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLR 103
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRD 298
L++ K T F ++ ++YL + IIHRD++P NIL D
Sbjct: 104 YHLQQNVHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPD-----------NILLD 149
Query: 299 DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVF---KNEEYDTKVDVFSFALIL 355
+ G++ + DF ++ +L + +T + Y+APE+F K Y VD +S +
Sbjct: 150 EHGHVHITDFNIAAMLP--RETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTA 207
Query: 356 QEMIEGCPPFTMK 368
E++ G P+ ++
Sbjct: 208 YELLRGRRPYHIR 220
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 171
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 172 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 171
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 172 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 171
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 172 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 87 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 146
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 147 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 192
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 193 LLIDQQGYIQVTDFGFAK--RVKGATWTLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 248
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 249 IYEMAAGYPPF 259
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 171
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 172 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 126
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 172
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 173 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 229 IYEMAAGYPPF 239
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 171
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 172 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 24/235 (10%)
Query: 179 AVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLR 238
A+K L + + DRVR + E +L ++ HP +V+ A + ++ ++L GDL
Sbjct: 56 AMKVLKKATLKVRDRVRT-KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLF 114
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRD 298
L ++ + ++A +++LH + II+RDL+P NIL D
Sbjct: 115 TRLSKEVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPE-----------NILLD 160
Query: 299 DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 358
+ G++K+ DFG+SK E + + T Y+APEV + D +SF +++ EM
Sbjct: 161 EEGHIKLTDFGLSKESIDHEKKAYSFCGT-VEYMAPEVVNRRGHTQSADWWSFGVLMFEM 219
Query: 359 IEGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKR 411
+ G PF K E A P F +P + L+ + PA R
Sbjct: 220 LTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEA------QSLLRMLFKRNPANR 268
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 126 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 171
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 172 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 61 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 120
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 121 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPE-----------N 166
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 167 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 222
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 223 IYEMAAGYPPF 233
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 171
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 172 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 107/260 (41%), Gaps = 56/260 (21%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
EL +L + P +V F GA + I E++ G L LK+ G + + ++ +
Sbjct: 116 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 175
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+G+ YL E I+HRD++PS NIL + G +K+ DFGVS L D
Sbjct: 176 IKGLTYLREKH--KIMHRDVKPS-----------NILVNSRGEIKLCDFGVSGQLI---D 219
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEG---CPP---------FTM 367
+ Y++PE + Y + D++S L L EM G PP F
Sbjct: 220 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGC 279
Query: 368 KHDNEVPK-------------AYAARQRPPF---------------KAPAKLYARGLKEL 399
+ + + + +Y RPP K P+ +++ ++
Sbjct: 280 QVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDF 339
Query: 400 IEECWNEKPAKRPTFRQIIT 419
+ +C + PA+R +Q++
Sbjct: 340 VNKCLIKNPAERADLKQLMV 359
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 131/289 (45%), Gaps = 41/289 (14%)
Query: 163 ITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAV 219
I KG F + W G +VA++ + E ++D+++AF+ E+ ++ RH NVV F+GA
Sbjct: 41 IGKGRFGQVYHGRWHG-EVAIRLIDIER-DNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 220 TQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRD 278
+ I+T L + ++ K L + + A +I +GM YLH I+H+D
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKD 155
Query: 279 LEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTV-----KEDRPLTCQDTSCRYVA 333
L+ +++ D+G + + DFG+ + V +ED+ L Q+ ++A
Sbjct: 156 LKSKNVFY------------DNGKVVITDFGLFSISGVLQAGRREDK-LRIQNGWLCHLA 202
Query: 334 PEVFKNEEYDTK---------VDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPP 384
PE+ + DT+ DVF+ I E+ PF + + +P
Sbjct: 203 PEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPN 262
Query: 385 FKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI---NNSINH 430
+ + +++ CW + +RPTF +++ LE + N ++H
Sbjct: 263 LSQIG--MGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSH 309
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 126 GEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPE-----------N 171
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 172 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 115/244 (47%), Gaps = 20/244 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G +VA++++ + + +E+ ++++ ++PN+V +L + + +V EYL
Sbjct: 45 GQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 101
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G L + + + + + +LH N+ +IHRD++ SD N
Sbjct: 102 GSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIK-SD----------N 146
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
IL G++K+ DFG +T ++ + T ++APEV + Y KVD++S ++
Sbjct: 147 ILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTP-YWMAPEVVTRKAYGPKVDIWSLGIM 205
Query: 355 LQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTF 414
EMIEG PP+ ++ A P + P KL A ++ + C + KR +
Sbjct: 206 AIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI-FRDFLNRCLDMDVEKRGSA 264
Query: 415 RQII 418
++++
Sbjct: 265 KELL 268
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 126 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPE-----------N 171
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 172 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 118/253 (46%), Gaps = 27/253 (10%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 22 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 81
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVA 287
EY G+L ++ + A RF + G+ YLH + I HRD++P
Sbjct: 82 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPE----- 133
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK- 345
N+L D+ NLK++DFG++ + +R L + YVAPE+ K E+ +
Sbjct: 134 ------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 346 VDVFSFALILQEMIEGCPPFTMKHDNEVPKAYA-ARQRPPFKAPAKLYARGLKELIEECW 404
VDV+S ++L M+ G P+ D+ + Y+ +++ + P K L+ +
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSX--QEYSDWKEKKTYLNPWKKIDSAPLALLHKIL 245
Query: 405 NEKPAKRPTFRQI 417
E P+ R T I
Sbjct: 246 VENPSARITIPDI 258
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 87 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 146
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 147 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 192
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 193 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 248
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 249 IYEMAAGYPPF 259
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 126 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 171
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 172 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 22 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 81
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVA 287
EY G+L ++ + A RF + G+ YLH + I HRD++P
Sbjct: 82 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPE----- 133
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK- 345
N+L D+ NLK++DFG++ + +R L + YVAPE+ K E+ +
Sbjct: 134 ------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 346 VDVFSFALILQEMIEGCPPFTMKHDN 371
VDV+S ++L M+ G P+ D+
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 114/244 (46%), Gaps = 20/244 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G +VA++++ + + +E+ ++++ ++PN+V +L + + +V EYL
Sbjct: 45 GQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 101
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G L + + + + + +LH N+ +IHRD++ SD N
Sbjct: 102 GSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIK-SD----------N 146
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
IL G++K+ DFG +T ++ + T ++APEV + Y KVD++S ++
Sbjct: 147 ILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTP-YWMAPEVVTRKAYGPKVDIWSLGIM 205
Query: 355 LQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTF 414
EMIEG PP+ ++ A P + P KL A ++ + C KR +
Sbjct: 206 AIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI-FRDFLNRCLEMDVEKRGSA 264
Query: 415 RQII 418
++++
Sbjct: 265 KELL 268
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 22 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 81
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVA 287
EY G+L ++ + A RF + G+ YLH + I HRD++P
Sbjct: 82 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPE----- 133
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK- 345
N+L D+ NLK++DFG++ + +R L + YVAPE+ K E+ +
Sbjct: 134 ------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 346 VDVFSFALILQEMIEGCPPFTMKHDN 371
VDV+S ++L M+ G P+ D+
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 108/221 (48%), Gaps = 16/221 (7%)
Query: 199 DELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALD 258
+E+A+L+ + HPN+++ +V E G+L + + A
Sbjct: 85 EEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQ 144
Query: 259 IARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKE 318
+ G+ YLH++ I+HRDL+P +L + + D I K+ DFG+S + +
Sbjct: 145 VLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALI--------KIVDFGLSAVF--EN 191
Query: 319 DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYA 378
+ + + + Y+APEV + ++YD K DV+S +IL ++ G PPF + D E+ +
Sbjct: 192 QKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRK-V 249
Query: 379 ARQRPPFKAPA-KLYARGLKELIEECWNEKPAKRPTFRQII 418
+ + F +P K + G K+LI++ +R + +Q +
Sbjct: 250 EKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQAL 290
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 22 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYL 81
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVA 287
EY G+L ++ + A RF + G+ YLH + I HRD++P
Sbjct: 82 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPE----- 133
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK- 345
N+L D+ NLK++DFG++ + +R L + YVAPE+ K E+ +
Sbjct: 134 ------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 346 VDVFSFALILQEMIEGCPPFTMKHDN 371
VDV+S ++L M+ G P+ D+
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 23 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYL 82
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVA 287
EY G+L ++ + A RF + G+ YLH + I HRD++P
Sbjct: 83 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPE----- 134
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK- 345
N+L D+ NLK++DFG++ + +R L + YVAPE+ K E+ +
Sbjct: 135 ------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 188
Query: 346 VDVFSFALILQEMIEGCPPFTMKHDN 371
VDV+S ++L M+ G P+ D+
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 106/261 (40%), Gaps = 58/261 (22%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
EL +L + P +V F GA + I E++ G L LK+ G + + ++ +
Sbjct: 81 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 140
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+G+ YL E I+HRD++PS NIL + G +K+ DFGVS L D
Sbjct: 141 IKGLTYLREKH--KIMHRDVKPS-----------NILVNSRGEIKLCDFGVSGQLI---D 184
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEG---CPPFTMKH------- 369
+ Y++PE + Y + D++S L L EM G PP K
Sbjct: 185 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGC 244
Query: 370 -------------------------DNEVPKA------YAARQRPPFKAPAKLYARGLKE 398
D+ P A Y + PP K P+ +++ ++
Sbjct: 245 QVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPP-KLPSGVFSLEFQD 303
Query: 399 LIEECWNEKPAKRPTFRQIIT 419
+ +C + PA+R +Q++
Sbjct: 304 FVNKCLIKNPAERADLKQLMV 324
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 23/227 (10%)
Query: 200 ELALLQKIRHPNVVQFLGAVT--QSSPMMIVTEYLPKGDLRAFL----KRKGALKPSTAV 253
E+ LL++++HPN+V++ + ++ + IV EY GDL + + K + L +
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 254 RFALDIARGMNYLH--ENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVS 311
R + + H + ++HRDL+P+ N+ D N+K+ DFG++
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPA-----------NVFLDGKQNVKLGDFGLA 163
Query: 312 KLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDN 371
++L T T Y++PE Y+ K D++S +L E+ PPFT
Sbjct: 164 RILNHDTSFAKTFVGTP-YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK 222
Query: 372 EVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
E+ A R+ + P + Y+ L E+I N K RP+ +I+
Sbjct: 223 EL--AGKIREGKFRRIPYR-YSDELNEIITRMLNLKDYHRPSVEEIL 266
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P +L +
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLII-------- 174
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 175 ---DQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIIISKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 21 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 80
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVA 287
EY G+L ++ + A RF + G+ YLH + I HRD++P
Sbjct: 81 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPE----- 132
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK- 345
N+L D+ NLK++DFG++ + +R L + YVAPE+ K E+ +
Sbjct: 133 ------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 186
Query: 346 VDVFSFALILQEMIEGCPPFTMKHDN 371
VDV+S ++L M+ G P+ D+
Sbjct: 187 VDVWSCGIVLTAMLAGELPWDQPSDS 212
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 22 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 81
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVA 287
EY G+L ++ + A RF + G+ YLH + I HRD++P
Sbjct: 82 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPE----- 133
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK- 345
N+L D+ NLK++DFG++ + +R L + YVAPE+ K E+ +
Sbjct: 134 ------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 346 VDVFSFALILQEMIEGCPPFTMKHDN 371
VDV+S ++L M+ G P+ D+
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 171
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K + + R T Y+APE+ ++ Y+ VD ++ ++
Sbjct: 172 LLIDQQGYIQVTDFGFAKRV---KGRTWXLXGTP-EYLAPEIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 171
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+APE+ ++ Y+ VD ++ ++
Sbjct: 172 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ +M G PPF
Sbjct: 228 IYQMAAGYPPF 238
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 22 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 81
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVA 287
EY G+L ++ + A RF + G+ YLH + I HRD++P
Sbjct: 82 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPE----- 133
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK- 345
N+L D+ NLK++DFG++ + +R L + YVAPE+ K E+ +
Sbjct: 134 ------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 346 VDVFSFALILQEMIEGCPPFTMKHDN 371
VDV+S ++L M+ G P+ D+
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 22 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 81
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVA 287
EY G+L ++ + A RF + G+ YLH + I HRD++P
Sbjct: 82 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPE----- 133
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK- 345
N+L D+ NLK++DFG++ + +R L + YVAPE+ K E+ +
Sbjct: 134 ------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 346 VDVFSFALILQEMIEGCPPFTMKHDN 371
VDV+S ++L M+ G P+ D+
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 21/225 (9%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRA-FLKRKGALKPSTAVRFALD 258
E+ +L HPN+V+ L A + + I+ E+ G + A L+ + L S
Sbjct: 57 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 116
Query: 259 IARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKE 318
+NYLH+NK IIHRDL+ NIL G++K+ADFGVS T
Sbjct: 117 TLDALNYLHDNK---IIHRDLKAG-----------NILFTLDGDIKLADFGVSAKNTRTX 162
Query: 319 DRPLTCQDTSCRYVAPEVF-----KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 373
+ + ++APEV K+ YD K DV+S + L EM E PP + V
Sbjct: 163 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV 222
Query: 374 PKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
A + P P++ ++ K+ +++C + R T Q++
Sbjct: 223 LLKIAKSEPPTLAQPSR-WSSNFKDFLKKCLEKNVDARWTTSQLL 266
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 22 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 81
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVA 287
EY G+L ++ + A RF + G+ YLH + I HRD++P
Sbjct: 82 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPE----- 133
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK- 345
N+L D+ NLK++DFG++ + +R L + YVAPE+ K E+ +
Sbjct: 134 ------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 346 VDVFSFALILQEMIEGCPPFTMKHDN 371
VDV+S ++L M+ G P+ D+
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 22 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 81
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVA 287
EY G+L ++ + A RF + G+ YLH + I HRD++P
Sbjct: 82 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPE----- 133
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK- 345
N+L D+ NLK++DFG++ + +R L + YVAPE+ K E+ +
Sbjct: 134 ------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 346 VDVFSFALILQEMIEGCPPFTMKHDN 371
VDV+S ++L M+ G P+ D+
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 23 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVA 287
EY G+L ++ + A RF + G+ YLH + I HRD++P
Sbjct: 83 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPE----- 134
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK- 345
N+L D+ NLK++DFG++ + +R L + YVAPE+ K E+ +
Sbjct: 135 ------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 346 VDVFSFALILQEMIEGCPPFTMKHDN 371
VDV+S ++L M+ G P+ D+
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 156 DFTNSVEITKGTF---ILAFWRGIQ--VAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
DF + + KG+F +L+ +G AVK L ++V+ DD V E +L P
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 211 NVVQFLGAVTQS-SPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHEN 269
+ L + Q+ + V EY+ GDL +++ G K AV +A +IA G+ +L
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK 140
Query: 270 KPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSC 329
II+RDL+ N++ D G++K+ADFG+ K + + +
Sbjct: 141 G---IIYRDLKLD-----------NVMLDSEGHIKIADFGMCKE-NIWDGVTTKXFCGTP 185
Query: 330 RYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 373
Y+APE+ + Y VD ++F ++L EM+ G PF + ++E+
Sbjct: 186 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL 229
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 23 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVA 287
EY G+L ++ + A RF + G+ YLH + I HRD++P
Sbjct: 83 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPE----- 134
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK- 345
N+L D+ NLK++DFG++ + +R L + YVAPE+ K E+ +
Sbjct: 135 ------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 346 VDVFSFALILQEMIEGCPPFTMKHDN 371
VDV+S ++L M+ G P+ D+
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 171
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K + + R T Y+APE+ ++ Y+ VD ++ ++
Sbjct: 172 LLIDQQGYIQVTDFGFAKRV---KGRTWXLAGTP-EYLAPEIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 22 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 81
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVA 287
EY G+L ++ + A RF + G+ YLH + I HRD++P
Sbjct: 82 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKP------ 132
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK- 345
N+L D+ NLK++DFG++ + +R L + YVAPE+ K E+ +
Sbjct: 133 -----ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 346 VDVFSFALILQEMIEGCPPFTMKHDN 371
VDV+S ++L M+ G P+ D+
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 23 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVA 287
EY G+L ++ + A RF + G+ YLH + I HRD++P
Sbjct: 83 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKP------ 133
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK- 345
N+L D+ NLK++DFG++ + +R L + YVAPE+ K E+ +
Sbjct: 134 -----ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 346 VDVFSFALILQEMIEGCPPFTMKHDN 371
VDV+S ++L M+ G P+ D+
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 22 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 81
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVA 287
EY G+L ++ + A RF + G+ YLH + I HRD++P
Sbjct: 82 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPE----- 133
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK- 345
N+L D+ NLK++DFG++ + +R L + YVAPE+ K E+ +
Sbjct: 134 ------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 346 VDVFSFALILQEMIEGCPPFTMKHDN 371
VDV+S ++L M+ G P+ D+
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 23 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVA 287
EY G+L ++ + A RF + G+ YLH + I HRD++P
Sbjct: 83 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPE----- 134
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK- 345
N+L D+ NLK++DFG++ + +R L + YVAPE+ K E+ +
Sbjct: 135 ------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 346 VDVFSFALILQEMIEGCPPFTMKHDN 371
VDV+S ++L M+ G P+ D+
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 23 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVA 287
EY G+L ++ + A RF + G+ YLH + I HRD++P
Sbjct: 83 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPE----- 134
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK- 345
N+L D+ NLK++DFG++ + +R L + YVAPE+ K E+ +
Sbjct: 135 ------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 346 VDVFSFALILQEMIEGCPPFTMKHDN 371
VDV+S ++L M+ G P+ D+
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 23 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVA 287
EY G+L ++ + A RF + G+ YLH + I HRD++P
Sbjct: 83 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPE----- 134
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK- 345
N+L D+ NLK++DFG++ + +R L + YVAPE+ K E+ +
Sbjct: 135 ------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 346 VDVFSFALILQEMIEGCPPFTMKHDN 371
VDV+S ++L M+ G P+ D+
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 22 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYL 81
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVA 287
EY G+L ++ + A RF + G+ YLH + I HRD++P
Sbjct: 82 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPE----- 133
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK- 345
N+L D+ NLK++DFG++ + +R L + YVAPE+ K E+ +
Sbjct: 134 ------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 346 VDVFSFALILQEMIEGCPPFTMKHDN 371
VDV+S ++L M+ G P+ D+
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 21/225 (9%)
Query: 146 PEYEIDPHELDFTNSVEITKGTF---ILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDE 200
P++ + +E ++ + KGTF IL + G A+K L +EVI D V E
Sbjct: 141 PKHRVTMNEFEYLKL--LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTE 198
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIA 260
+LQ RHP + + + V EY G+L L R+ A + +I
Sbjct: 199 NRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 258
Query: 261 RGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDR 320
++YLH K V ++RDL+ N++ D G++K+ DFG+ K +K+
Sbjct: 259 SALDYLHSEKNV--VYRDLKLE-----------NLMLDKDGHIKITDFGLCK-EGIKDGA 304
Query: 321 PLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 365
+ + Y+APEV ++ +Y VD + +++ EM+ G PF
Sbjct: 305 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 21/225 (9%)
Query: 146 PEYEIDPHELDFTNSVEITKGTF---ILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDE 200
P++ + +E ++ + KGTF IL + G A+K L +EVI D V E
Sbjct: 144 PKHRVTMNEFEYLKL--LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTE 201
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIA 260
+LQ RHP + + + V EY G+L L R+ A + +I
Sbjct: 202 NRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 261
Query: 261 RGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDR 320
++YLH K V ++RDL+ N++ D G++K+ DFG+ K +K+
Sbjct: 262 SALDYLHSEKNV--VYRDLKLE-----------NLMLDKDGHIKITDFGLCK-EGIKDGA 307
Query: 321 PLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 365
+ + Y+APEV ++ +Y VD + +++ EM+ G PF
Sbjct: 308 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 128/287 (44%), Gaps = 35/287 (12%)
Query: 154 ELDFTNSVEITKGTFILAFWRGIQVAVK--KLGEEVISDDDRVRAFRDELALLQKIRHPN 211
EL N + +G + + + I VA+K K G E ++ +R E ++ ++ +P
Sbjct: 343 ELGCGNFGSVRQGVYRMRK-KQIDVAIKVLKQGTEKADTEEMMR----EAQIMHQLDNPY 397
Query: 212 VVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFAL-DIARGMNYLHENK 270
+V+ +G V Q+ +M+V E G L FL K P + V L ++ GM YL E
Sbjct: 398 IVRLIG-VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN 456
Query: 271 PVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-- 328
+HR+L RN+L + K++DFG+SK L +D T +
Sbjct: 457 ---FVHRNLAA-----------RNVLLVNRHYAKISDFGLSKALGA-DDSYYTARSAGKW 501
Query: 329 -CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQRPP 384
++ APE ++ ++ DV+S+ + + E + G P+ EV R P
Sbjct: 502 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECP 561
Query: 385 FKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSINHK 431
+ P +LYA L+ +CW K RP F + R+ + S+ K
Sbjct: 562 PECPPELYA-----LMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 603
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 87/182 (47%), Gaps = 20/182 (10%)
Query: 203 LLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARG 262
LL+ +HPN++ + +VTE + G+L + R+ A I +
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKT 128
Query: 263 MNYLHENKPVPIIHRDLEPSD-LYVAYWQNDRNILRDDSGN---LKVADFGVSKLLTVKE 318
+ YLH ++HRDL+PS+ LYV D+SGN +++ DFG +K L E
Sbjct: 129 VEYLHAQG---VVHRDLKPSNILYV-----------DESGNPESIRICDFGFAKQLRA-E 173
Query: 319 DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYA 378
+ L + +VAPEV + + YD D++S ++L M+ G PF D + P+
Sbjct: 174 NGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD-DTPEEIL 232
Query: 379 AR 380
AR
Sbjct: 233 AR 234
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 156 DFTNSVEITKGTF---ILAFWRGIQ--VAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
DF + + KG+F +L+ +G AVK L ++V+ DD V E +L P
Sbjct: 342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 401
Query: 211 NVVQFLGAVTQS-SPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHEN 269
+ L + Q+ + V EY+ GDL +++ G K AV +A +IA G+ +L
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK 461
Query: 270 KPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSC 329
II+RDL+ N++ D G++K+ADFG+ K + + +
Sbjct: 462 G---IIYRDLKLD-----------NVMLDSEGHIKIADFGMCKE-NIWDGVTTKXFCGTP 506
Query: 330 RYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 373
Y+APE+ + Y VD ++F ++L EM+ G PF + ++E+
Sbjct: 507 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL 550
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + H NVV+F G + + +
Sbjct: 23 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQYL 82
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVA 287
EY G+L ++ + A RF + G+ YLH + I HRD++P
Sbjct: 83 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPE----- 134
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK- 345
N+L D+ NLK++DFG++ + +R L + YVAPE+ K E+ +
Sbjct: 135 ------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 346 VDVFSFALILQEMIEGCPPFTMKHDN 371
VDV+S ++L M+ G P+ D+
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 14/201 (6%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G + A+K + + ++ A DE+A+L+++ HPN+++ +V E
Sbjct: 46 GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRG 105
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G+L + + A + G YLH++ I+HRDL+P +L + R+
Sbjct: 106 GELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHN---IVHRDLKPENLLLE--SKSRD 160
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
L +K+ DFG+S V + + + Y+APEV + ++YD K DV+S +I
Sbjct: 161 AL------IKIVDFGLSAHFEV--GGKMKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVI 211
Query: 355 LQEMIEGCPPFTMKHDNEVPK 375
L ++ G PPF + D E+ K
Sbjct: 212 LYILLCGYPPFGGQTDQEILK 232
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 106/229 (46%), Gaps = 30/229 (13%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR--KGALKPSTAVRFAL 257
E+ +L HP +V+ LGA + I+ E+ P G + A + +G +P V
Sbjct: 58 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-VCR 116
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVK 317
+ +N+LH + IIHRDL+ N+L G++++ADFGVS K
Sbjct: 117 QMLEALNFLHSKR---IIHRDLKAG-----------NVLMTLEGDIRLADFGVS----AK 158
Query: 318 EDRPLTCQDT---SCRYVAPEV-----FKNEEYDTKVDVFSFALILQEMIEGCPPFTMKH 369
+ L +D+ + ++APEV K+ YD K D++S + L EM + PP +
Sbjct: 159 NLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN 218
Query: 370 DNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
V A P P+K ++ ++ ++ ++ P RP+ Q++
Sbjct: 219 PMRVLLKIAKSDPPTLLTPSK-WSVEFRDFLKIALDKNPETRPSAAQLL 266
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 106/229 (46%), Gaps = 30/229 (13%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR--KGALKPSTAVRFAL 257
E+ +L HP +V+ LGA + I+ E+ P G + A + +G +P V
Sbjct: 66 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-VCR 124
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVK 317
+ +N+LH + IIHRDL+ N+L G++++ADFGVS K
Sbjct: 125 QMLEALNFLHSKR---IIHRDLKAG-----------NVLMTLEGDIRLADFGVS----AK 166
Query: 318 EDRPLTCQDT---SCRYVAPEV-----FKNEEYDTKVDVFSFALILQEMIEGCPPFTMKH 369
+ L +D+ + ++APEV K+ YD K D++S + L EM + PP +
Sbjct: 167 NLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN 226
Query: 370 DNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
V A P P+K ++ ++ ++ ++ P RP+ Q++
Sbjct: 227 PMRVLLKIAKSDPPTLLTPSK-WSVEFRDFLKIALDKNPETRPSAAQLL 274
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 95/207 (45%), Gaps = 28/207 (13%)
Query: 166 GTFILAFWRGIQVAVKKLGEEV-ISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + VAVKKL V I+ ++ + F E+ + K +H N+V+ LG +
Sbjct: 36 GVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDD 95
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPST---AVRFALDIARGMNYLHENKPVPIIHRDLEP 281
+ +V Y P G L L P + + A A G+N+LHEN IHRD++
Sbjct: 96 LCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKS 152
Query: 282 SDLYVAYWQNDRNILRDDSGNLKVADFGVSK-----LLTVKEDRPLTCQDTSCRYVAPEV 336
+ NIL D++ K++DFG+++ V R + + Y APE
Sbjct: 153 A-----------NILLDEAFTAKISDFGLARASEKFAQXVXXSRIV----GTTAYXAPEA 197
Query: 337 FKNEEYDTKVDVFSFALILQEMIEGCP 363
+ E K D++SF ++L E+I G P
Sbjct: 198 LRG-EITPKSDIYSFGVVLLEIITGLP 223
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 29/198 (14%)
Query: 199 DELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFA 256
+E +L+K+ VV A + +V + GDL+ + G + AV +A
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTV 316
+I G+ LH + I++RDL+P NIL DD G+++++D G++ + V
Sbjct: 293 AEICCGLEDLHRER---IVYRDLKPE-----------NILLDDHGHIRISDLGLA--VHV 336
Query: 317 KEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHD------ 370
E + + + + Y+APEV KNE Y D ++ +L EMI G PF +
Sbjct: 337 PEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE 396
Query: 371 -----NEVPKAYAARQRP 383
EVP+ Y+ R P
Sbjct: 397 VERLVKEVPEEYSERFSP 414
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 171
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C + Y+AP + ++ Y+ VD ++ ++
Sbjct: 172 LLIDQQGYIQVTDFGFAK--RVKGRTWXLC--GTPEYLAPAIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 14/201 (6%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G + A+K + + ++ A DE+A+L+++ HPN+++ +V E
Sbjct: 29 GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRG 88
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G+L + + A + G YLH++ I+HRDL+P +L + R+
Sbjct: 89 GELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHN---IVHRDLKPENLLLE--SKSRD 143
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
L +K+ DFG+S V + + + Y+APEV + ++YD K DV+S +I
Sbjct: 144 AL------IKIVDFGLSAHFEV--GGKMKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVI 194
Query: 355 LQEMIEGCPPFTMKHDNEVPK 375
L ++ G PPF + D E+ K
Sbjct: 195 LYILLCGYPPFGGQTDQEILK 215
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 32/204 (15%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQF------LGAVTQSSPMMIV 228
G QVA+K+ +E +S +R R + E+ +++K+ HPNVV L + + ++
Sbjct: 39 GEQVAIKQCRQE-LSPKNRER-WCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLA 96
Query: 229 TEYLPKGDLRAFLKR---KGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLY 285
EY GDLR +L + LK DI+ + YLHEN+ IIHRDL+P ++
Sbjct: 97 MEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENI- 152
Query: 286 VAYWQNDRNILRDDSGNL--KVADFGVSKLLTVKEDRPLTCQD--TSCRYVAPEVFKNEE 341
+L+ L K+ D G +K L D+ C + + +Y+APE+ + ++
Sbjct: 153 ---------VLQPGPQRLIHKIIDLGYAKEL----DQGELCTEFVGTLQYLAPELLEQKK 199
Query: 342 YDTKVDVFSFALILQEMIEGCPPF 365
Y VD +SF + E I G PF
Sbjct: 200 YTVTVDYWSFGTLAFECITGFRPF 223
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 19/175 (10%)
Query: 196 AFRD-----ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPS 250
AFRD E+A+L+KI+H N+V ++ +V + + G+L + +G
Sbjct: 47 AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEK 106
Query: 251 TAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGV 310
A + + YLHEN I+HRDL+P +L + +++ + + DFG+
Sbjct: 107 DASLVIQQVLSAVKYLHENG---IVHRDLKPENLLY--------LTPEENSKIMITDFGL 155
Query: 311 SKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 365
SK+ +++ ++ + YVAPEV + Y VD +S +I ++ G PPF
Sbjct: 156 SKM---EQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF 207
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 29/198 (14%)
Query: 199 DELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFA 256
+E +L+K+ VV A + +V + GDL+ + G + AV +A
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTV 316
+I G+ LH + I++RDL+P NIL DD G+++++D G++ + V
Sbjct: 293 AEICCGLEDLHRER---IVYRDLKPE-----------NILLDDHGHIRISDLGLA--VHV 336
Query: 317 KEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHD------ 370
E + + + + Y+APEV KNE Y D ++ +L EMI G PF +
Sbjct: 337 PEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE 396
Query: 371 -----NEVPKAYAARQRP 383
EVP+ Y+ R P
Sbjct: 397 VERLVKEVPEEYSERFSP 414
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 32/204 (15%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQF------LGAVTQSSPMMIV 228
G QVA+K+ +E +S +R R + E+ +++K+ HPNVV L + + ++
Sbjct: 40 GEQVAIKQCRQE-LSPKNRER-WCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLA 97
Query: 229 TEYLPKGDLRAFLKR---KGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLY 285
EY GDLR +L + LK DI+ + YLHEN+ IIHRDL+P ++
Sbjct: 98 MEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENI- 153
Query: 286 VAYWQNDRNILRDDSGNL--KVADFGVSKLLTVKEDRPLTCQD--TSCRYVAPEVFKNEE 341
+L+ L K+ D G +K L D+ C + + +Y+APE+ + ++
Sbjct: 154 ---------VLQPGPQRLIHKIIDLGYAKEL----DQGELCTEFVGTLQYLAPELLEQKK 200
Query: 342 YDTKVDVFSFALILQEMIEGCPPF 365
Y VD +SF + E I G PF
Sbjct: 201 YTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 19/167 (11%)
Query: 203 LLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARG 262
LL+ +HPN++ + +VTE + G+L + R+ A I +
Sbjct: 74 LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKT 133
Query: 263 MNYLHENKPVPIIHRDLEPSD-LYVAYWQNDRNILRDDSGN---LKVADFGVSKLLTVKE 318
+ YLH ++HRDL+PS+ LYV D+SGN L++ DFG +K L E
Sbjct: 134 VEYLHSQG---VVHRDLKPSNILYV-----------DESGNPECLRICDFGFAKQLRA-E 178
Query: 319 DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 365
+ L + +VAPEV K + YD D++S ++L M+ G PF
Sbjct: 179 NGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 19/167 (11%)
Query: 203 LLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARG 262
LL+ +HPN++ + +VTE + G+L + R+ A I +
Sbjct: 74 LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKT 133
Query: 263 MNYLHENKPVPIIHRDLEPSD-LYVAYWQNDRNILRDDSGN---LKVADFGVSKLLTVKE 318
+ YLH ++HRDL+PS+ LYV D+SGN L++ DFG +K L E
Sbjct: 134 VEYLHSQG---VVHRDLKPSNILYV-----------DESGNPECLRICDFGFAKQLRA-E 178
Query: 319 DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 365
+ L + +VAPEV K + YD D++S ++L M+ G PF
Sbjct: 179 NGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 18/229 (7%)
Query: 142 AREVPEYEIDPHELD-----FTNSVEITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRA 196
A VP+Y ID D F E+ +G + + + K +V+ +
Sbjct: 35 ASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKI 94
Query: 197 FRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFA 256
R E+ +L ++ HPN+++ + + +V E + G+L + KG A
Sbjct: 95 VRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAV 154
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTV 316
I + YLHEN I+HRDL+P +L A D LK+ADFG+SK++
Sbjct: 155 KQILEAVAYLHENG---IVHRDLKPENLLYATPAPD--------APLKIADFGLSKIVEH 203
Query: 317 KEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 365
+ C Y APE+ + Y +VD++S +I ++ G PF
Sbjct: 204 QVLMKTVCGTPG--YCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPF 250
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 106/235 (45%), Gaps = 39/235 (16%)
Query: 200 ELALLQKIRHPNVVQFLGAVT--QSSPMMIVTEYLPKGDLRAFL----KRKGALKPSTAV 253
E+ LL++++HPN+V++ + ++ + IV EY GDL + + K + L +
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 254 RFALDIARGMNYLH--ENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVS 311
R + + H + ++HRDL+P+ N+ D N+K+ DFG++
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPA-----------NVFLDGKQNVKLGDFGLA 163
Query: 312 KLLTVKEDRPLTCQDTSC--------RYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCP 363
++L DTS Y++PE Y+ K D++S +L E+ P
Sbjct: 164 RILN---------HDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMP 214
Query: 364 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
PFT E+ A R+ + P + Y+ L E+I N K RP+ +I+
Sbjct: 215 PFTAFSQKEL--AGKIREGKFRRIPYR-YSDELNEIITRMLNLKDYHRPSVEEIL 266
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 14/191 (7%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L +EVI D V E +LQ RHP + + + V EY
Sbjct: 33 GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 92
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G+L L R+ A + +I ++YLH K V ++RDL+ N
Sbjct: 93 GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNV--VYRDLKLE-----------N 139
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
++ D G++K+ DFG+ K +K+ + + Y+APEV ++ +Y VD + ++
Sbjct: 140 LMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 198
Query: 355 LQEMIEGCPPF 365
+ EM+ G PF
Sbjct: 199 MYEMMCGRLPF 209
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 14/191 (7%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L +EVI D V E +LQ RHP + + + V EY
Sbjct: 34 GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 93
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G+L L R+ A + +I ++YLH K V ++RDL+ N
Sbjct: 94 GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNV--VYRDLKLE-----------N 140
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
++ D G++K+ DFG+ K +K+ + + Y+APEV ++ +Y VD + ++
Sbjct: 141 LMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 199
Query: 355 LQEMIEGCPPF 365
+ EM+ G PF
Sbjct: 200 MYEMMCGRLPF 210
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 14/191 (7%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L +EVI D V E +LQ RHP + + + V EY
Sbjct: 35 GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 94
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G+L L R+ A + +I ++YLH K V ++RDL+ N
Sbjct: 95 GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNV--VYRDLKLE-----------N 141
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
++ D G++K+ DFG+ K +K+ + + Y+APEV ++ +Y VD + ++
Sbjct: 142 LMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 200
Query: 355 LQEMIEGCPPF 365
+ EM+ G PF
Sbjct: 201 MYEMMCGRLPF 211
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 103/204 (50%), Gaps = 26/204 (12%)
Query: 220 TQSSPMMIVTEYLPKGDLRAFL-KRKG-ALKPSTAVRFALDIARGMNYLHENKPVPIIHR 277
+++ + I E+ KG L ++ KR+G L A+ I +G++Y+H K +IHR
Sbjct: 104 SKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK---LIHR 160
Query: 278 DLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVF 337
DL+PS++++ D+ +K+ DFG+ + ++K D T + RY++PE
Sbjct: 161 DLKPSNIFLV-----------DTKQVKIGDFGL--VTSLKNDGKRTRSKGTLRYMSPEQI 207
Query: 338 KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLK 397
+++Y +VD+++ LIL E++ C E K + + + ++ + K
Sbjct: 208 SSQDYGKEVDLYALGLILAELLHVCDTAF-----ETSKFFTDLRDGII---SDIFDKKEK 259
Query: 398 ELIEECWNEKPAKRPTFRQIITRL 421
L+++ ++KP RP +I+ L
Sbjct: 260 TLLQKLLSKKPEDRPNTSEILRTL 283
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 98/198 (49%), Gaps = 27/198 (13%)
Query: 176 IQVAVKKLGEEVISDDDRVR-AFRDELALLQKIR-HPNVVQFLGAVTQSSPMMIVTEYLP 233
++V ++L E + + VR A R E +L+++ HP+++ + + SS M +V + +
Sbjct: 127 MEVTAERLSPEQLEE---VREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMR 183
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDR 293
KG+L +L K AL + +++LH N I+HRDL+P
Sbjct: 184 KGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPE----------- 229
Query: 294 NILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFK------NEEYDTKVD 347
NIL DD+ ++++DFG S L E C Y+APE+ K + Y +VD
Sbjct: 230 NILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPG--YLAPEILKCSMDETHPGYGKEVD 287
Query: 348 VFSFALILQEMIEGCPPF 365
+++ +IL ++ G PPF
Sbjct: 288 LWACGVILFTLLAGSPPF 305
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 18/191 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G++ + L+R G A +A I YLH + +I+RDL+P N
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKP-----------EN 171
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+L D G ++V DFG +K VK C +APE+ ++ Y+ VD ++ ++
Sbjct: 172 LLIDQQGYIQVTDFGFAK--RVKGRTWXLCGTPEA--LAPEIILSKGYNKAVDWWALGVL 227
Query: 355 LQEMIEGCPPF 365
+ EM G PPF
Sbjct: 228 IYEMAAGYPPF 238
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 108/227 (47%), Gaps = 38/227 (16%)
Query: 154 ELDFTNSVEITKGTFILAFWRGI----QVAVKKLGEEVISDDDRVRAFRDELALLQKIRH 209
E+ +TN I G+F + F + +VA+KK + D R + EL +++ ++H
Sbjct: 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKK-----VLQDKRFK--NRELQIMRIVKH 91
Query: 210 PNVVQFLGAVTQSSP-------MMIVTEYLPKGDLRA---FLKRKGALKPSTAVRFALDI 259
PNVV L A S+ + +V EY+P+ RA + K K + + +
Sbjct: 92 PNVVD-LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQL 150
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
R + Y+H + I HRD++P +L +L SG LK+ DFG +K+L E
Sbjct: 151 LRSLAYIHS---IGICHRDIKPQNL----------LLDPPSGVLKLIDFGSAKILIAGE- 196
Query: 320 RPLTCQDTSCRYVAPE-VFKNEEYDTKVDVFSFALILQEMIEGCPPF 365
P S Y APE +F Y T +D++S ++ E+++G P F
Sbjct: 197 -PNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLF 242
>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or264.
pdb|4GPM|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or264
Length = 169
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
Query: 24 KEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQ 83
K A++N D DG L A E +K L+ G DVN +D D RT LH AA
Sbjct: 59 KGADVNAKDSDGR-----TPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAEN 113
Query: 84 GFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
G EVV LL+ +GADV+ D G TPL A + N EV+KLLEK G
Sbjct: 114 GHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Query: 43 RLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPK 102
RL+ A + + +K+L+++G DVN D D RT LH AA G EVV LL+ +GADV+ K
Sbjct: 7 RLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAK 66
Query: 103 DRWGSTPLGDAIYYKNHEVIKLLEKHGA------KPLMAPMHVKHAREVPEYEI 150
D G TPL A + EV+KLL GA P+H HA E E+
Sbjct: 67 DSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLH--HAAENGHKEV 118
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 26 AELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGF 85
A++N D DG L A E +K L+ G DVN +D D RT LH AA G
Sbjct: 28 ADVNASDSDGR-----TPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGH 82
Query: 86 TEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
EVV LL+ +GADV+ KD G TPL A + EV+KLL GA
Sbjct: 83 KEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGA 127
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 110/212 (51%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 62
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+++ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P +N+L + G +K+ADFG+++ V R T + +
Sbjct: 122 HR---VLHRDLKP-----------QNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVT 166
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 128/297 (43%), Gaps = 30/297 (10%)
Query: 129 GAKPLMAPMHVKHAREVPEYEIDPHELD-FTNSVEITKGTFILAFWRGIQ-----VAVKK 182
G+ P AP+ +E+P+ +DP + + + KG F + A K
Sbjct: 4 GSDPKSAPL-----KEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKV 58
Query: 183 LGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK 242
+ + ++ + E+A+ + + +P+VV F G + +V E + L K
Sbjct: 59 VPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHK 118
Query: 243 RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGN 302
R+ A+ A F +G+ YLH N+ +IHRDL+ +L++ +D +
Sbjct: 119 RRKAVTEPEARYFMRQTIQGVQYLHNNR---VIHRDLKLGNLFL-----------NDDMD 164
Query: 303 LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGC 362
+K+ DFG++ + +R T Y+APEV + + +VD++S IL ++ G
Sbjct: 165 VKIGDFGLATKIEFDGERKKDLCGTP-NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
Query: 363 PPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIIT 419
PPF E Y ++ + P + LI + P RP+ +++T
Sbjct: 224 PPFETSCLKE---TYIRIKKNEYSVPRHINPVA-SALIRRMLHADPTLRPSVAELLT 276
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 19/220 (8%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+A+ + + +P+VV F G + +V E + L KR+ A+ A F
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 151
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+G+ YLH N+ +IHRDL+ +L++ +D ++K+ DFG++ + +
Sbjct: 152 IQGVQYLHNNR---VIHRDLKLGNLFL-----------NDDMDVKIGDFGLATKIEFDGE 197
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAA 379
R T T Y+APEV + + +VD++S IL ++ G PPF E Y
Sbjct: 198 RKKTLCGTP-NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKE---TYIR 253
Query: 380 RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIIT 419
++ + P + LI + P RP+ +++T
Sbjct: 254 IKKNEYSVPRHINPVA-SALIRRMLHADPTLRPSVAELLT 292
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 19/181 (10%)
Query: 196 AFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK---PSTA 252
+ +E+A+L+KI+H N+V + + +V + + G+L + KG ST
Sbjct: 66 SIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTL 125
Query: 253 VRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK 312
+R LD + YLH + I+HRDL+P +L Y+ +D+ + ++DFG+SK
Sbjct: 126 IRQVLD---AVYYLHR---MGIVHRDLKPENLL--YYS------QDEESKIMISDFGLSK 171
Query: 313 LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNE 372
+ + C YVAPEV + Y VD +S +I ++ G PPF ++D++
Sbjct: 172 MEGKGDVMSTACGTPG--YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSK 229
Query: 373 V 373
+
Sbjct: 230 L 230
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 121/252 (48%), Gaps = 23/252 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 48 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 104
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L +++ K + + + + IA+GMNYL + + ++HRDL RN
Sbjct: 105 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAA-----------RN 150
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG++KLL +E + +++A E + Y + DV+S+ +
Sbjct: 151 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 210
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ +E+ +R P + P + + ++ +CW RP
Sbjct: 211 TVWELMTFGSKPYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMRKCWMIDADSRP 267
Query: 413 TFRQIITRLESI 424
FR++I +
Sbjct: 268 KFRELIIEFSKM 279
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 114/240 (47%), Gaps = 42/240 (17%)
Query: 200 ELALLQKIRHPNVVQFLG----------------AVTQSSPMMIVTEYLPKGDLRAFL-K 242
E+ L K+ H N+V + G + +++ + I E+ KG L ++ K
Sbjct: 54 EVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 113
Query: 243 RKG-ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSG 301
R+G L A+ I +G++Y+H K +I+RDL+PS++++ D+
Sbjct: 114 RRGEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLV-----------DTK 159
Query: 302 NLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEG 361
+K+ DFG+ + ++K D + RY++PE +++Y +VD+++ LIL E++
Sbjct: 160 QVKIGDFGL--VTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHV 217
Query: 362 CPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRL 421
C E K + + + ++ + K L+++ ++KP RP +I+ L
Sbjct: 218 CDTAF-----ETSKFFTDLRDGII---SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTL 269
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 121/252 (48%), Gaps = 23/252 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 45 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 101
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L +++ K + + + + IA+GMNYL + + ++HRDL RN
Sbjct: 102 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAA-----------RN 147
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG++KLL +E + +++A E + Y + DV+S+ +
Sbjct: 148 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 207
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ +E+ +R P + P + + ++ +CW RP
Sbjct: 208 TVWELMTFGSKPYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMRKCWMIDADSRP 264
Query: 413 TFRQIITRLESI 424
FR++I +
Sbjct: 265 KFRELIIEFSKM 276
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 109/212 (51%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 69
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P +N+L + G +K+ADFG+++ V R T + +
Sbjct: 129 HR---VLHRDLKP-----------QNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVT 173
Query: 329 CRYVAPEVFKNEE-YDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 174 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMV 205
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 120/283 (42%), Gaps = 25/283 (8%)
Query: 142 AREVPEYEIDPHELDFTNSVE-ITKGTFILAFWRGIQ-----VAVKKLGEEVISDDDRVR 195
A+E+PE +DP + KG F F A K + + ++ +
Sbjct: 3 AKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE 62
Query: 196 AFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRF 255
E+++ + + H +VV F G + + +V E + L KR+ AL A +
Sbjct: 63 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYY 122
Query: 256 ALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLT 315
I G YLH N+ +IHRDL+ +L++ ++ +K+ DFG++ +
Sbjct: 123 LRQIVLGCQYLHRNR---VIHRDLKLGNLFL-----------NEDLEVKIGDFGLATKVE 168
Query: 316 VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPK 375
+R T T Y+APEV + + +VDV+S I+ ++ G PPF E
Sbjct: 169 YDGERKKTLCGTP-NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE--- 224
Query: 376 AYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
Y ++ + P + LI++ P RPT +++
Sbjct: 225 TYLRIKKNEYSIPKHINPVA-ASLIQKMLQTDPTARPTINELL 266
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 109/212 (51%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 62
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P +N+L + G +K+ADFG+++ V R T + +
Sbjct: 122 HR---VLHRDLKP-----------QNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVT 166
Query: 329 CRYVAPEVFKNEE-YDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 167 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMV 198
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 121/252 (48%), Gaps = 23/252 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 45 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 101
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L +++ K + + + + IA+GMNYL + + ++HRDL RN
Sbjct: 102 XLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAA-----------RN 147
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG++KLL +E + +++A E + Y + DV+S+ +
Sbjct: 148 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 207
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ +E+ +R P + P + + ++ +CW RP
Sbjct: 208 TVWELMTFGSKPYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRP 264
Query: 413 TFRQIITRLESI 424
FR++I +
Sbjct: 265 KFRELIIEFSKM 276
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 104/242 (42%), Gaps = 50/242 (20%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFR-DELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLP 233
G Q AVKK+ R+ FR +EL + P +V GAV + + I E L
Sbjct: 118 GFQCAVKKV---------RLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLE 168
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDR 293
G L +K +G L A+ + G+ YLH + I+H D+ + D
Sbjct: 169 GGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRR---ILHGDV----------KADN 215
Query: 294 NILRDDSGNLKVADF---------GVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
+L D + + DF G+ K L + P T +T ++APEV D
Sbjct: 216 VLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGT--ET---HMAPEVVLGRSCDA 270
Query: 345 KVDVFSFALILQEMIEGCPPFT--------MKHDNEVPKAYAARQRPPFKAPAKLYARGL 396
KVDV+S ++ M+ GC P+T +K +E P R+ PP AP L A+ +
Sbjct: 271 KVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPP---VREIPPSCAP--LTAQAI 325
Query: 397 KE 398
+E
Sbjct: 326 QE 327
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 121/252 (48%), Gaps = 23/252 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 55 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 111
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L +++ K + + + + IA+GMNYL + + ++HRDL RN
Sbjct: 112 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAA-----------RN 157
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG++KLL +E + +++A E + Y + DV+S+ +
Sbjct: 158 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 217
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ +E+ +R P + P + + ++ +CW RP
Sbjct: 218 TVWELMTFGSKPYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMRKCWMIDADSRP 274
Query: 413 TFRQIITRLESI 424
FR++I +
Sbjct: 275 KFRELIIEFSKM 286
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 120/283 (42%), Gaps = 25/283 (8%)
Query: 142 AREVPEYEIDPHELDFTNSVE-ITKGTFILAFWRGIQ-----VAVKKLGEEVISDDDRVR 195
A+E+PE +DP + KG F F A K + + ++ +
Sbjct: 3 AKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE 62
Query: 196 AFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRF 255
E+++ + + H +VV F G + + +V E + L KR+ AL A +
Sbjct: 63 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYY 122
Query: 256 ALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLT 315
I G YLH N+ +IHRDL+ +L++ ++ +K+ DFG++ +
Sbjct: 123 LRQIVLGCQYLHRNR---VIHRDLKLGNLFL-----------NEDLEVKIGDFGLATKVE 168
Query: 316 VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPK 375
+R T T Y+APEV + + +VDV+S I+ ++ G PPF E
Sbjct: 169 YDGERKKTLCGTP-NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE--- 224
Query: 376 AYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
Y ++ + P + LI++ P RPT +++
Sbjct: 225 TYLRIKKNEYSIPKHINPVA-ASLIQKMLQTDPTARPTINELL 266
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 25/226 (11%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFL----KRKGALKPSTAVRF 255
E+ +L+ + HPN+++ M IV E G+L + R AL
Sbjct: 70 EIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAEL 129
Query: 256 ALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDS---GNLKVADFGVSK 312
+ + Y H ++H+DL+P NIL D+ +K+ DFG+++
Sbjct: 130 MKQMMNALAYFHSQH---VVHKDLKP-----------ENILFQDTSPHSPIKIIDFGLAE 175
Query: 313 LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNE 372
L K D T + Y+APEVFK + K D++S +++ ++ GC PFT E
Sbjct: 176 LF--KSDEHSTNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE 232
Query: 373 VPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
V + A + P + + +L+++ + P +RP+ Q++
Sbjct: 233 VQQK-ATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVL 277
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 120/283 (42%), Gaps = 25/283 (8%)
Query: 142 AREVPEYEIDPHELDFTNSVE-ITKGTFILAFWRGIQ-----VAVKKLGEEVISDDDRVR 195
A+E+PE +DP + KG F F A K + + ++ +
Sbjct: 7 AKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE 66
Query: 196 AFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRF 255
E+++ + + H +VV F G + + +V E + L KR+ AL A +
Sbjct: 67 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYY 126
Query: 256 ALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLT 315
I G YLH N+ +IHRDL+ +L++ ++ +K+ DFG++ +
Sbjct: 127 LRQIVLGCQYLHRNR---VIHRDLKLGNLFL-----------NEDLEVKIGDFGLATKVE 172
Query: 316 VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPK 375
+R T T Y+APEV + + +VDV+S I+ ++ G PPF E
Sbjct: 173 YDGERKKTLCGTP-NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE--- 228
Query: 376 AYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
Y ++ + P + LI++ P RPT +++
Sbjct: 229 TYLRIKKNEYSIPKHINPVA-ASLIQKMLQTDPTARPTINELL 270
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 109/212 (51%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 61
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P +N+L + G +K+ADFG+++ V R T + +
Sbjct: 121 HR---VLHRDLKP-----------QNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVT 165
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 16/203 (7%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIR-HPNVVQFLGAVTQSSPMMIVTEYLP 233
G AVK L ++VI DD V E +L R HP + Q + V E++
Sbjct: 48 GDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVN 107
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDR 293
GDL +++ + A +A +I + +LH+ II+RDL+
Sbjct: 108 GGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLD----------- 153
Query: 294 NILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
N+L D G+ K+ADFG+ K T T Y+APE+ + Y VD ++ +
Sbjct: 154 NVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTP-DYIAPEILQEMLYGPAVDWWAMGV 212
Query: 354 ILQEMIEGCPPFTMKHDNEVPKA 376
+L EM+ G PF ++++++ +A
Sbjct: 213 LLYEMLCGHAPFEAENEDDLFEA 235
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 109/212 (51%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 66
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P +N+L + G +K+ADFG+++ V R T + +
Sbjct: 126 HR---VLHRDLKP-----------QNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVT 170
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 202
>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or266.
pdb|4GMR|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or266
Length = 169
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 55/90 (61%)
Query: 43 RLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPK 102
RL+ A + + +K+LL++G DVN D D +T LH+AA G EVV LLL +GAD + K
Sbjct: 7 RLIEAAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAK 66
Query: 103 DRWGSTPLGDAIYYKNHEVIKLLEKHGAKP 132
D G TPL A + EV+KLL GA P
Sbjct: 67 DSDGKTPLHLAAENGHKEVVKLLLSQGADP 96
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 55/101 (54%)
Query: 30 GLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEVV 89
G D + ++ + L A E +K LL G D N +D D +T LH+AA G EVV
Sbjct: 60 GADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVV 119
Query: 90 SLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
LLL +GAD + D G TPL A + N EV+KLLEK G
Sbjct: 120 KLLLSQGADPNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 26 AELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGF 85
A++N D DG+ L A E +K LL G D N +D D +T LH+AA G
Sbjct: 28 ADVNASDSDGK-----TPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGH 82
Query: 86 TEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGAKP 132
EVV LLL +GAD + KD G TPL A + EV+KLL GA P
Sbjct: 83 KEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADP 129
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 109/212 (51%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 62
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P +N+L + G +K+ADFG+++ V R T + +
Sbjct: 122 HR---VLHRDLKP-----------QNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVT 166
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 109/212 (51%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 61
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P +N+L + G +K+ADFG+++ V R T + +
Sbjct: 121 HR---VLHRDLKP-----------QNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVT 165
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 109/212 (51%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 62
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P +N+L + G +K+ADFG+++ V R T + +
Sbjct: 122 HR---VLHRDLKP-----------QNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVT 166
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 121/252 (48%), Gaps = 23/252 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 51 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 107
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L +++ K + + + + IA+GMNYL + + ++HRDL RN
Sbjct: 108 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAA-----------RN 153
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG++KLL +E + +++A E + Y + DV+S+ +
Sbjct: 154 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 213
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ +E+ +R P + P + + ++ +CW RP
Sbjct: 214 TVWELMTFGSKPYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRP 270
Query: 413 TFRQIITRLESI 424
FR++I +
Sbjct: 271 KFRELIIEFSKM 282
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 121/252 (48%), Gaps = 23/252 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 39 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 95
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L +++ K + + + + IA+GMNYL + + ++HRDL RN
Sbjct: 96 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAA-----------RN 141
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG++KLL +E + +++A E + Y + DV+S+ +
Sbjct: 142 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 201
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ +E+ +R P + P + + ++ +CW RP
Sbjct: 202 TVWELMTFGSKPYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRP 258
Query: 413 TFRQIITRLESI 424
FR++I +
Sbjct: 259 KFRELIIEFSKM 270
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 121/252 (48%), Gaps = 23/252 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 48 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 104
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L +++ K + + + + IA+GMNYL + + ++HRDL RN
Sbjct: 105 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAA-----------RN 150
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG++KLL +E + +++A E + Y + DV+S+ +
Sbjct: 151 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 210
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ +E+ +R P + P + + ++ +CW RP
Sbjct: 211 TVWELMTFGSKPYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRP 267
Query: 413 TFRQIITRLESI 424
FR++I +
Sbjct: 268 KFRELIIEFSKM 279
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 109/212 (51%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 69
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P +N+L + G +K+ADFG+++ V R T + +
Sbjct: 129 HR---VLHRDLKP-----------QNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVT 173
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 174 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 205
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 109/212 (51%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 63
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P +N+L + G +K+ADFG+++ V R T + +
Sbjct: 123 HR---VLHRDLKP-----------QNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVT 167
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 121/252 (48%), Gaps = 23/252 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 48 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 104
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L +++ K + + + + IA+GMNYL + + ++HRDL RN
Sbjct: 105 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAA-----------RN 150
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG++KLL +E + +++A E + Y + DV+S+ +
Sbjct: 151 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 210
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ +E+ +R P + P + + ++ +CW RP
Sbjct: 211 TVWELMTFGSKPYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRP 267
Query: 413 TFRQIITRLESI 424
FR++I +
Sbjct: 268 KFRELIIEFSKM 279
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 121/252 (48%), Gaps = 23/252 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 45 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 101
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L +++ K + + + + IA+GMNYL + + ++HRDL RN
Sbjct: 102 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAA-----------RN 147
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG++KLL +E + +++A E + Y + DV+S+ +
Sbjct: 148 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 207
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ +E+ +R P + P + + ++ +CW RP
Sbjct: 208 TVWELMTFGSKPYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRP 264
Query: 413 TFRQIITRLESI 424
FR++I +
Sbjct: 265 KFRELIIEFSKM 276
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 121/252 (48%), Gaps = 23/252 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 47 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 103
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L +++ K + + + + IA+GMNYL + + ++HRDL RN
Sbjct: 104 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAA-----------RN 149
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG++KLL +E + +++A E + Y + DV+S+ +
Sbjct: 150 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 209
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ +E+ +R P + P + + ++ +CW RP
Sbjct: 210 TVWELMTFGSKPYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRP 266
Query: 413 TFRQIITRLESI 424
FR++I +
Sbjct: 267 KFRELIIEFSKM 278
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 121/252 (48%), Gaps = 23/252 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 52 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 108
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L +++ K + + + + IA+GMNYL + + ++HRDL RN
Sbjct: 109 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAA-----------RN 154
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG++KLL +E + +++A E + Y + DV+S+ +
Sbjct: 155 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 214
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ +E+ +R P + P + + ++ +CW RP
Sbjct: 215 TVWELMTFGSKPYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRP 271
Query: 413 TFRQIITRLESI 424
FR++I +
Sbjct: 272 KFRELIIEFSKM 283
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 121/252 (48%), Gaps = 23/252 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 52 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 108
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L +++ K + + + + IA+GMNYL + + ++HRDL RN
Sbjct: 109 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAA-----------RN 154
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG++KLL +E + +++A E + Y + DV+S+ +
Sbjct: 155 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 214
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ +E+ +R P + P + + ++ +CW RP
Sbjct: 215 TVWELMTFGSKPYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRP 271
Query: 413 TFRQIITRLESI 424
FR++I +
Sbjct: 272 KFRELIIEFSKM 283
>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four
Identical Consensus Repeats
Length = 126
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 60/101 (59%)
Query: 30 GLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEVV 89
G D + ++ L A +E +K LL++G DVN +D + RT LH+AA G EVV
Sbjct: 25 GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVV 84
Query: 90 SLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
LLLE GADV+ KD+ G TPL A + EV+KLL + GA
Sbjct: 85 KLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 55/87 (63%)
Query: 44 LMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKD 103
L A +E +K LL++G DVN +D + RT LH+AA G EVV LLLE GADV+ KD
Sbjct: 6 LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKD 65
Query: 104 RWGSTPLGDAIYYKNHEVIKLLEKHGA 130
+ G TPL A + EV+KLL + GA
Sbjct: 66 KNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 39/59 (66%)
Query: 72 DNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
+ RT LH+AA G EVV LLLE GADV+ KD+ G TPL A + EV+KLL + GA
Sbjct: 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 59
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 19/193 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFR-DELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLP 233
G Q AVKK+ R+ FR +EL + P +V GAV + + I E L
Sbjct: 83 GFQCAVKKV---------RLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE 133
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDR 293
G L +K+ G L A+ + G+ YLH + I+H D++ ++ ++ R
Sbjct: 134 GGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSS-DGSR 189
Query: 294 NILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
L D L + G+ K L + P T +T ++APEV + D KVD++S
Sbjct: 190 AALCDFGHALCLQPDGLGKSLLTGDYIPGT--ET---HMAPEVVMGKPCDAKVDIWSSCC 244
Query: 354 ILQEMIEGCPPFT 366
++ M+ GC P+T
Sbjct: 245 MMLHMLNGCHPWT 257
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 121/252 (48%), Gaps = 23/252 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 45 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 101
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L +++ K + + + + IA+GMNYL + + ++HRDL RN
Sbjct: 102 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAA-----------RN 147
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG++KLL +E + +++A E + Y + DV+S+ +
Sbjct: 148 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 207
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ +E+ +R P + P + + ++ +CW RP
Sbjct: 208 TVWELMTFGSKPYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRP 264
Query: 413 TFRQIITRLESI 424
FR++I +
Sbjct: 265 KFRELIIEFSKM 276
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 121/252 (48%), Gaps = 23/252 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 70 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 126
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L +++ K + + + + IA+GMNYL + + ++HRDL RN
Sbjct: 127 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAA-----------RN 172
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG++KLL +E + +++A E + Y + DV+S+ +
Sbjct: 173 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 232
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ +E+ +R P + P + + ++ +CW RP
Sbjct: 233 TVWELMTFGSKPYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRP 289
Query: 413 TFRQIITRLESI 424
FR++I +
Sbjct: 290 KFRELIIEFSKM 301
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 99/205 (48%), Gaps = 30/205 (14%)
Query: 178 VAVKKL--GEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
VAVK + GE++ D+ V+ E+ + +RHPN+V+F + + + IV EY G
Sbjct: 47 VAVKYIERGEKI---DENVKR---EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGG 100
Query: 236 DLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNI 295
+L + G A F + G++Y H + + HRDL+ N
Sbjct: 101 ELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQ---VAHRDLKL-----------ENT 146
Query: 296 LRDDS--GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKV-DVFSFA 352
L D S LK+ADFG SK +V +P + T Y+APEV +EYD KV DV+S
Sbjct: 147 LLDGSPAPRLKIADFGYSK-ASVLHSQPKSAVGTPA-YIAPEVLLKKEYDGKVADVWSCG 204
Query: 353 LILQEMIEGCPPFTMKHDNEVPKAY 377
+ L M+ G PF D E PK +
Sbjct: 205 VTLYVMLVGAYPF---EDPEEPKNF 226
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 19/193 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFR-DELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLP 233
G Q AVKK+ R+ FR +EL + P +V GAV + + I E L
Sbjct: 99 GFQCAVKKV---------RLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE 149
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDR 293
G L +K+ G L A+ + G+ YLH + I+H D++ ++ ++ R
Sbjct: 150 GGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSS-DGSR 205
Query: 294 NILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
L D L + G+ K L + P T +T ++APEV + D KVD++S
Sbjct: 206 AALCDFGHALCLQPDGLGKSLLTGDYIPGT--ET---HMAPEVVMGKPCDAKVDIWSSCC 260
Query: 354 ILQEMIEGCPPFT 366
++ M+ GC P+T
Sbjct: 261 MMLHMLNGCHPWT 273
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 19/193 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFR-DELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLP 233
G Q AVKK+ R+ FR +EL + P +V GAV + + I E L
Sbjct: 97 GFQCAVKKV---------RLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE 147
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDR 293
G L +K+ G L A+ + G+ YLH + I+H D++ ++ ++ R
Sbjct: 148 GGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSS-DGSR 203
Query: 294 NILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
L D L + G+ K L + P T +T ++APEV + D KVD++S
Sbjct: 204 AALCDFGHALCLQPDGLGKSLLTGDYIPGT--ET---HMAPEVVMGKPCDAKVDIWSSCC 258
Query: 354 ILQEMIEGCPPFT 366
++ M+ GC P+T
Sbjct: 259 MMLHMLNGCHPWT 271
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 20/182 (10%)
Query: 203 LLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARG 262
LL+ +HPN++ + +VTE G+L + R+ A I +
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKT 128
Query: 263 MNYLHENKPVPIIHRDLEPSD-LYVAYWQNDRNILRDDSGN---LKVADFGVSKLLTVKE 318
+ YLH ++HRDL+PS+ LYV D+SGN +++ DFG +K L E
Sbjct: 129 VEYLHAQG---VVHRDLKPSNILYV-----------DESGNPESIRICDFGFAKQLRA-E 173
Query: 319 DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYA 378
+ L + +VAPEV + + YD D++S ++L + G PF D + P+
Sbjct: 174 NGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPD-DTPEEIL 232
Query: 379 AR 380
AR
Sbjct: 233 AR 234
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 116/245 (47%), Gaps = 23/245 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K L E + F DE ++ + HP++V+ LG V S + +VT+ +P G
Sbjct: 45 IPVAIKILNETTGPKANV--EFMDEALIMASMDHPHLVRLLG-VCLSPTIQLVTQLMPHG 101
Query: 236 DLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L ++ + K + + + + IA+GM YL E + ++HRDL RN
Sbjct: 102 CLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAA-----------RN 147
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG+++LL E + +++A E ++ + DV+S+ +
Sbjct: 148 VLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGV 207
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ E+P +R P + P + + ++ +CW RP
Sbjct: 208 TIWELMTFGGKPYDGIPTREIPDLLEKGERLP-QPP--ICTIDVYMVMVKCWMIDADSRP 264
Query: 413 TFRQI 417
F+++
Sbjct: 265 KFKEL 269
>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three
Identical Consensus Repeats
pdb|1N0Q|B Chain B, 3ank: A Designed Ankyrin Repeat Protein With Three
Identical Consensus Repeats
Length = 93
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 55/87 (63%)
Query: 44 LMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKD 103
L A +E +K LL++G DVN +D + RT LH+AA G EVV LLLE GADV+ KD
Sbjct: 6 LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKD 65
Query: 104 RWGSTPLGDAIYYKNHEVIKLLEKHGA 130
+ G TPL A + EV+KLL + GA
Sbjct: 66 KNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 39/59 (66%)
Query: 72 DNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
+ RT LH+AA G EVV LLLE GADV+ KD+ G TPL A + EV+KLL + GA
Sbjct: 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 59
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 39/68 (57%)
Query: 30 GLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEVV 89
G D + ++ L A +E +K LL++G DVN +D + RT LH+AA G EVV
Sbjct: 25 GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVV 84
Query: 90 SLLLERGA 97
LLLE GA
Sbjct: 85 KLLLEAGA 92
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 116/245 (47%), Gaps = 23/245 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K L E + F DE ++ + HP++V+ LG V S + +VT+ +P G
Sbjct: 68 IPVAIKILNETTGPKANV--EFMDEALIMASMDHPHLVRLLG-VCLSPTIQLVTQLMPHG 124
Query: 236 DLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L ++ + K + + + + IA+GM YL E + ++HRDL RN
Sbjct: 125 CLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAA-----------RN 170
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG+++LL E + +++A E ++ + DV+S+ +
Sbjct: 171 VLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGV 230
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ E+P +R P + P + + ++ +CW RP
Sbjct: 231 TIWELMTFGGKPYDGIPTREIPDLLEKGERLP-QPP--ICTIDVYMVMVKCWMIDADSRP 287
Query: 413 TFRQI 417
F+++
Sbjct: 288 KFKEL 292
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 104/242 (42%), Gaps = 50/242 (20%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFR-DELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLP 233
G Q AVKK+ R+ FR +EL + P +V GAV + + I E L
Sbjct: 99 GFQCAVKKV---------RLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLE 149
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDR 293
G L +K +G L A+ + G+ YLH + I+H D+ + D
Sbjct: 150 GGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRR---ILHGDV----------KADN 196
Query: 294 NILRDDSGNLKVADF---------GVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
+L D + + DF G+ K L + P T +T ++APEV D
Sbjct: 197 VLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGT--ET---HMAPEVVLGRSCDA 251
Query: 345 KVDVFSFALILQEMIEGCPPFT--------MKHDNEVPKAYAARQRPPFKAPAKLYARGL 396
KVDV+S ++ M+ GC P+T +K +E P R+ PP AP L A+ +
Sbjct: 252 KVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPP---VREIPPSCAP--LTAQAI 306
Query: 397 KE 398
+E
Sbjct: 307 QE 308
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 134/292 (45%), Gaps = 58/292 (19%)
Query: 173 WRGIQVAVKKLGEEVISDDDRVRAFRD-ELALLQKIRHPNVVQFLGAVT----QSSPMMI 227
W+G VAVK + S D FR+ EL +RH N++ F+ + S+ + +
Sbjct: 58 WQGENVAVK-----IFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 112
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLH------ENKPVPIIHRDLEP 281
+T Y G L +L+ L + +R L IA G+ +LH + KP I HRDL+
Sbjct: 113 ITHYHEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA-IAHRDLK- 169
Query: 282 SDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD---TSCRYVAPEVF- 337
+NIL +G +AD G++ + + ++ + + RY+APEV
Sbjct: 170 ----------SKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLD 219
Query: 338 ---KNEEYDT--KVDVFSFALILQE----MIEGC------PPF--TMKHD---NEVPKAY 377
+ + +D+ +VD+++F L+L E M+ PPF + +D ++ K
Sbjct: 220 ETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVV 279
Query: 378 AARQRPPFKAPAKLYA----RGLKELIEECWNEKPAKRPTFRQIITRLESIN 425
Q+ P P + ++ L +L++ECW + P+ R T +I L I+
Sbjct: 280 CVDQQRP-NIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKID 330
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 123/275 (44%), Gaps = 30/275 (10%)
Query: 151 DPHEL--DFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
DP E +F E + G +A + G QVAVKK+ + R +E+ +++
Sbjct: 42 DPREYLANFIKIGEGSTGIVCIATEKHTGKQVAVKKMD---LRKQQRRELLFNEVVIMRD 98
Query: 207 IRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
H NVV + + +V E+L G L + + A L + R ++YL
Sbjct: 99 YHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAT-VCLSVLRALSYL 157
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD 326
H +IHRD++ SD +IL G +K++DFG ++ KE
Sbjct: 158 HNQG---VIHRDIK-SD----------SILLTSDGRIKLSDFGFCAQVS-KEVPKRKXLV 202
Query: 327 TSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQR---P 383
+ ++APEV Y T+VD++S +++ EMI+G PP+ NE P R R P
Sbjct: 203 GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYF----NEPPLQAMRRIRDSLP 258
Query: 384 PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
P + L+ ++ +P++R T ++++
Sbjct: 259 PRVKDLHKVSSVLRGFLDLMLVREPSQRATAQELL 293
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 94/203 (46%), Gaps = 26/203 (12%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VAVK + D++ R E+ + +RHPN+V+F + + + I+ EY G+L
Sbjct: 48 VAVKYIERGAAIDENVQR----EIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGEL 103
Query: 238 RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILR 297
+ G A F + G++Y H + I HRDL+ N L
Sbjct: 104 YERICNAGRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKL-----------ENTLL 149
Query: 298 DDS--GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKV-DVFSFALI 354
D S LK+ DFG SK +V +P + T Y+APEV +EYD K+ DV+S +
Sbjct: 150 DGSPAPRLKICDFGYSK-SSVLHSQPKSTVGTPA-YIAPEVLLRQEYDGKIADVWSCGVT 207
Query: 355 LQEMIEGCPPFTMKHDNEVPKAY 377
L M+ G PF D E P+ Y
Sbjct: 208 LYVMLVGAYPF---EDPEEPRDY 227
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 120/252 (47%), Gaps = 23/252 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 42 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 98
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L +++ K + + + + IA GMNYL + + ++HRDL RN
Sbjct: 99 CLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRR---LVHRDLAA-----------RN 144
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG++KLL +E + +++A E + Y + DV+S+ +
Sbjct: 145 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 204
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ +E+ +R P + P + + ++ +CW RP
Sbjct: 205 TVWELMTFGSKPYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRP 261
Query: 413 TFRQIITRLESI 424
FR++I +
Sbjct: 262 KFRELIIEFSKM 273
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 139/303 (45%), Gaps = 63/303 (20%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRD-ELALLQKIRHPNVVQFLGAVT 220
E+ +G+ W+G VAVK + S D FR+ EL +RH N++ F+ +
Sbjct: 23 EVWRGS-----WQGENVAVK-----IFSSRDEKSWFRETELYNTVMLRHENILGFIASDM 72
Query: 221 ----QSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLH------ENK 270
S+ + ++T Y G L +L+ L + +R L IA G+ +LH + K
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEIFGTQGK 131
Query: 271 PVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD---T 327
P I HRDL+ +NIL +G +AD G++ + + ++ +
Sbjct: 132 PA-IAHRDLK-----------SKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVG 179
Query: 328 SCRYVAPEVF----KNEEYDT--KVDVFSFALILQE----MIEGC------PPF--TMKH 369
+ RY+APEV + + +D+ +VD+++F L+L E M+ PPF + +
Sbjct: 180 TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN 239
Query: 370 D---NEVPKAYAARQRPPFKAPAKLYA----RGLKELIEECWNEKPAKRPTFRQIITRLE 422
D ++ K Q+ P P + ++ L +L++ECW + P+ R T +I L
Sbjct: 240 DPSFEDMRKVVCVDQQRP-NIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLT 298
Query: 423 SIN 425
I+
Sbjct: 299 KID 301
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 124/276 (44%), Gaps = 34/276 (12%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+++L+++ HPN++ + ++++ E + G+L FL +K +L A F I
Sbjct: 65 EVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
G+NYLH K I H DL+P ++ + D+NI ++K+ DFG++ +++
Sbjct: 125 LDGVNYLHTKK---IAHFDLKPENIMLL----DKNI---PIPHIKLIDFGLAH--EIEDG 172
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF-------TMKHDNE 372
+ +VAPE+ E + D++S +I ++ G PF T+ +
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITA 232
Query: 373 VPKAYAARQRPPFKAPAKLYARGL--KELIEECWNEKPAKRPTF-----RQIITRLESIN 425
V + AK + R L KE + ++ + P +Q + R ES+
Sbjct: 233 VSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQAMVRRESVV 292
Query: 426 NSINHK-----RRWKIR---TMKCFHNLEAMLKKDH 453
N N K RRWK+ C H +++KK H
Sbjct: 293 NLENFKKQYVRRRWKLSFSIVSLCNHLTRSLMKKVH 328
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 120/252 (47%), Gaps = 23/252 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 47 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 103
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L +++ K + + + + IA+GMNYL + + ++HRDL RN
Sbjct: 104 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAA-----------RN 149
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG +KLL +E + +++A E + Y + DV+S+ +
Sbjct: 150 VLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 209
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ +E+ +R P + P + + ++ +CW RP
Sbjct: 210 TVWELMTFGSKPYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMRKCWMIDADSRP 266
Query: 413 TFRQIITRLESI 424
FR++I +
Sbjct: 267 KFRELIIEFSKM 278
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 109/215 (50%), Gaps = 25/215 (11%)
Query: 153 HELDFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKI 207
H +F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++
Sbjct: 2 HMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 60
Query: 208 RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNY 265
HPN+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 266 LHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ 325
H ++ ++HRDL+P +N+L + G +K+ADFG+++ V R +
Sbjct: 120 CHSHR---VLHRDLKP-----------QNLLINTEGAIKLADFGLARAFGVPV-RTYXHE 164
Query: 326 DTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
+ Y APE+ + Y T VD++S I EM+
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 97/205 (47%), Gaps = 30/205 (14%)
Query: 178 VAVKKL--GEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
VAVK + GE++ ++ R E+ + +RHPN+V+F + + + IV EY G
Sbjct: 47 VAVKYIERGEKIAANVKR------EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGG 100
Query: 236 DLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNI 295
+L + G A F + G++Y H + + HRDL+ N
Sbjct: 101 ELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ---VCHRDLKL-----------ENT 146
Query: 296 LRDDS--GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKV-DVFSFA 352
L D S LK+ DFG SK +V +P + T Y+APEV +EYD KV DV+S
Sbjct: 147 LLDGSPAPRLKICDFGYSK-SSVLHSQPKSTVGTPA-YIAPEVLLKKEYDGKVADVWSCG 204
Query: 353 LILQEMIEGCPPFTMKHDNEVPKAY 377
+ L M+ G PF D E PK +
Sbjct: 205 VTLYVMLVGAYPF---EDPEEPKNF 226
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 111/262 (42%), Gaps = 22/262 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G VA+K + + + D + + E+ L+ +RH ++ Q + ++ + +V EY P
Sbjct: 35 GEMVAIKIMDKNTLGSD--LPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPG 92
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G+L ++ + L I + Y+H HRDL+P N
Sbjct: 93 GELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKP-----------EN 138
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY-DTKVDVFSFAL 353
+L D+ LK+ DFG+ +D L S Y APE+ + + Y ++ DV+S +
Sbjct: 139 LLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGI 198
Query: 354 ILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPT 413
+L ++ G PF D+ V Y R + P L + L+++ P KR +
Sbjct: 199 LLYVLMCGFLPFD---DDNVMALYKKIMRGKYDVPKWLSPSSIL-LLQQMLQVDPKKRIS 254
Query: 414 FRQIITRLESINNSINHKRRWK 435
+ ++ I N+ W+
Sbjct: 255 MKNLLNH-PWIMQDYNYPVEWQ 275
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 139/303 (45%), Gaps = 63/303 (20%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRD-ELALLQKIRHPNVVQFLGAVT 220
E+ +G+ W+G VAVK + S D FR+ EL +RH N++ F+ +
Sbjct: 23 EVWRGS-----WQGENVAVK-----IFSSRDEKSWFRETELYNTVMLRHENILGFIASDM 72
Query: 221 ----QSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLH------ENK 270
S+ + ++T Y G L +L+ L + +R L IA G+ +LH + K
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEIFGTQGK 131
Query: 271 PVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD---T 327
P I HRDL+ +NIL +G +AD G++ + + ++ +
Sbjct: 132 PA-IAHRDLK-----------SKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVG 179
Query: 328 SCRYVAPEVF----KNEEYDT--KVDVFSFALILQE----MIEGC------PPF--TMKH 369
+ RY+APEV + + +D+ +VD+++F L+L E M+ PPF + +
Sbjct: 180 TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN 239
Query: 370 D---NEVPKAYAARQRPPFKAPAKLYA----RGLKELIEECWNEKPAKRPTFRQIITRLE 422
D ++ K Q+ P P + ++ L +L++ECW + P+ R T +I L
Sbjct: 240 DPSFEDMRKVVCVDQQRP-NIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLT 298
Query: 423 SIN 425
I+
Sbjct: 299 KID 301
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 19/220 (8%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+A+ + + +P+VV F G + +V E + L KR+ A+ A F
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 151
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+G+ YLH N+ +IHRDL+ +L++ +D ++K+ DFG++ + +
Sbjct: 152 IQGVQYLHNNR---VIHRDLKLGNLFL-----------NDDMDVKIGDFGLATKIEFDGE 197
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAA 379
R T Y+APEV + + +VD++S IL ++ G PPF E Y
Sbjct: 198 RKKXLCGTP-NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKE---TYIR 253
Query: 380 RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIIT 419
++ + P + LI + P RP+ +++T
Sbjct: 254 IKKNEYSVPRHINPVA-SALIRRMLHADPTLRPSVAELLT 292
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 119/283 (42%), Gaps = 25/283 (8%)
Query: 142 AREVPEYEIDPHELDFTNSVE-ITKGTFILAFWRGIQ-----VAVKKLGEEVISDDDRVR 195
A+E+PE +DP + KG F F A K + + ++ +
Sbjct: 1 AKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE 60
Query: 196 AFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRF 255
E+++ + + H +VV F G + + +V E + L KR+ AL A +
Sbjct: 61 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYY 120
Query: 256 ALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLT 315
I G YLH N+ +IHRDL+ +L++ ++ +K+ DFG++ +
Sbjct: 121 LRQIVLGCQYLHRNR---VIHRDLKLGNLFL-----------NEDLEVKIGDFGLATKVE 166
Query: 316 VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPK 375
+R T Y+APEV + + +VDV+S I+ ++ G PPF E
Sbjct: 167 YDGERKKVLCGTP-NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE--- 222
Query: 376 AYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
Y ++ + P + LI++ P RPT +++
Sbjct: 223 TYLRIKKNEYSIPKHINPVA-ASLIQKMLQTDPTARPTINELL 264
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 109/212 (51%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 61
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E++ + DL+ F+ P ++ + + +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P +N+L + G +K+ADFG+++ V R T + +
Sbjct: 121 HR---VLHRDLKP-----------QNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVT 165
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 108/212 (50%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 65
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P +N+L + G +K+ADFG+++ V R + +
Sbjct: 125 HR---VLHRDLKP-----------QNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVT 169
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 24/174 (13%)
Query: 204 LQKIRHPNVVQFLGAVTQS-----SPMMIVTEYLPKGDLRAFLKR--KGALKPSTAVRFA 256
L+ HPNVV+ T S + + +V E++ + DL +L + + + T
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMM 126
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTV 316
+ RG+++LH ++ ++HRDL+P +NIL SG +K+ADFG++++ +
Sbjct: 127 FQLLRGLDFLHSHR---VVHRDLKP-----------QNILVTSSGQIKLADFGLARIYSF 172
Query: 317 KEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHD 370
+ LT + Y APEV Y T VD++S I EM P F D
Sbjct: 173 Q--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD 224
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 19/220 (8%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+A+ + + +P+VV F G + +V E + L KR+ A+ A F
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 151
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+G+ YLH N+ +IHRDL+ +L++ +D ++K+ DFG++ + +
Sbjct: 152 IQGVQYLHNNR---VIHRDLKLGNLFL-----------NDDMDVKIGDFGLATKIEFDGE 197
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAA 379
R T Y+APEV + + +VD++S IL ++ G PPF E Y
Sbjct: 198 RKKDLCGTP-NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKE---TYIR 253
Query: 380 RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIIT 419
++ + P + LI + P RP+ +++T
Sbjct: 254 IKKNEYSVPRHINPVA-SALIRRMLHADPTLRPSVAELLT 292
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 120/252 (47%), Gaps = 23/252 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++ + +P G
Sbjct: 46 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLIMQLMPFG 102
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L +++ K + + + + IA+GMNYL + + ++HRDL RN
Sbjct: 103 XLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAA-----------RN 148
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG++KLL +E + +++A E + Y + DV+S+ +
Sbjct: 149 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 208
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ +E+ +R P + P + + ++ +CW RP
Sbjct: 209 TVWELMTFGSKPYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRP 265
Query: 413 TFRQIITRLESI 424
FR++I +
Sbjct: 266 KFRELIIEFSKM 277
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 120/252 (47%), Gaps = 23/252 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 45 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 101
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L +++ K + + + + IA+GMNYL + + ++HRDL RN
Sbjct: 102 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAA-----------RN 147
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG +KLL +E + +++A E + Y + DV+S+ +
Sbjct: 148 VLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 207
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ +E+ +R P + P + + ++ +CW RP
Sbjct: 208 TVWELMTFGSKPYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRP 264
Query: 413 TFRQIITRLESI 424
FR++I +
Sbjct: 265 KFRELIIEFSKM 276
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 24/174 (13%)
Query: 204 LQKIRHPNVVQFLGAVTQS-----SPMMIVTEYLPKGDLRAFLKR--KGALKPSTAVRFA 256
L+ HPNVV+ T S + + +V E++ + DL +L + + + T
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMM 126
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTV 316
+ RG+++LH ++ ++HRDL+P +NIL SG +K+ADFG++++ +
Sbjct: 127 FQLLRGLDFLHSHR---VVHRDLKP-----------QNILVTSSGQIKLADFGLARIYSF 172
Query: 317 KEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHD 370
+ LT + Y APEV Y T VD++S I EM P F D
Sbjct: 173 Q--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD 224
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 24/174 (13%)
Query: 204 LQKIRHPNVVQFLGAVTQS-----SPMMIVTEYLPKGDLRAFLKR--KGALKPSTAVRFA 256
L+ HPNVV+ T S + + +V E++ + DL +L + + + T
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMM 126
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTV 316
+ RG+++LH ++ ++HRDL+P +NIL SG +K+ADFG++++ +
Sbjct: 127 FQLLRGLDFLHSHR---VVHRDLKP-----------QNILVTSSGQIKLADFGLARIYSF 172
Query: 317 KEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHD 370
+ LT + Y APEV Y T VD++S I EM P F D
Sbjct: 173 Q--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD 224
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 120/252 (47%), Gaps = 23/252 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 52 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 108
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L +++ K + + + + IA+GMNYL + + ++HRDL RN
Sbjct: 109 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAA-----------RN 154
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG +KLL +E + +++A E + Y + DV+S+ +
Sbjct: 155 VLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 214
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ +E+ +R P + P + + ++ +CW RP
Sbjct: 215 TVWELMTFGSKPYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRP 271
Query: 413 TFRQIITRLESI 424
FR++I +
Sbjct: 272 KFRELIIEFSKM 283
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 20/215 (9%)
Query: 156 DFTNSVEITKGTF---ILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
DF + KGTF IL + G A+K L +EVI D V E +LQ RHP
Sbjct: 9 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 68
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENK 270
+ A + V EY G+L L R+ A + +I + YLH
Sbjct: 69 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 128
Query: 271 PVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 330
+++RD++ N++ D G++K+ DFG+ K + + + +
Sbjct: 129 ---VVYRDIKLE-----------NLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPE 173
Query: 331 YVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 365
Y+APEV ++ +Y VD + +++ EM+ G PF
Sbjct: 174 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 20/215 (9%)
Query: 156 DFTNSVEITKGTF---ILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
DF + KGTF IL + G A+K L +EVI D V E +LQ RHP
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENK 270
+ A + V EY G+L L R+ A + +I + YLH
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 271 PVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 330
+++RD++ N++ D G++K+ DFG+ K + + + +
Sbjct: 126 ---VVYRDIKLE-----------NLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPE 170
Query: 331 YVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 365
Y+APEV ++ +Y VD + +++ EM+ G PF
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 108/212 (50%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 65
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P +N+L + G +K+ADFG+++ V R + +
Sbjct: 125 HR---VLHRDLKP-----------QNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVT 169
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 108/212 (50%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 64
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P +N+L + G +K+ADFG+++ V R + +
Sbjct: 124 HR---VLHRDLKP-----------QNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVT 168
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 108/212 (50%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 62
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P +N+L + G +K+ADFG+++ V R + +
Sbjct: 122 HR---VLHRDLKP-----------QNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVT 166
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 98/205 (47%), Gaps = 30/205 (14%)
Query: 178 VAVKKL--GEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
VAVK + GE++ D+ V+ E+ + +RHPN+V+F + + + IV EY G
Sbjct: 46 VAVKYIERGEKI---DENVKR---EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGG 99
Query: 236 DLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNI 295
+L + G A F + G++Y H + + HRDL+ N
Sbjct: 100 ELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ---VCHRDLKL-----------ENT 145
Query: 296 LRDDS--GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKV-DVFSFA 352
L D S LK+ DFG SK +V +P + T Y+APEV +EYD KV DV+S
Sbjct: 146 LLDGSPAPRLKICDFGYSK-SSVLHSQPKSTVGTPA-YIAPEVLLKKEYDGKVADVWSCG 203
Query: 353 LILQEMIEGCPPFTMKHDNEVPKAY 377
+ L M+ G PF D E PK +
Sbjct: 204 VTLYVMLVGAYPF---EDPEEPKNF 225
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 108/212 (50%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+ K+ + ++ A R E++LL+++ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELNHP 62
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P +N+L + G +K+ADFG+++ V R T + +
Sbjct: 122 HR---VLHRDLKP-----------QNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVT 166
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 108/212 (50%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 65
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P +N+L + G +K+ADFG+++ V R + +
Sbjct: 125 HR---VLHRDLKP-----------QNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVT 169
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 108/212 (50%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+ K+ + ++ A R E++LL+++ HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELNHP 61
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P +N+L + G +K+ADFG+++ V R T + +
Sbjct: 121 HR---VLHRDLKP-----------QNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVT 165
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 108/212 (50%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 61
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P +N+L + G +K+ADFG+++ V R + +
Sbjct: 121 HR---VLHRDLKP-----------QNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVT 165
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 20/215 (9%)
Query: 156 DFTNSVEITKGTF---ILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
DF + KGTF IL + G A+K L +EVI D V E +LQ RHP
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENK 270
+ A + V EY G+L L R+ A + +I + YLH
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 271 PVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 330
+++RD++ N++ D G++K+ DFG+ K + + + +
Sbjct: 126 ---VVYRDIKLE-----------NLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPE 170
Query: 331 YVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 365
Y+APEV ++ +Y VD + +++ EM+ G PF
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 108/212 (50%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 62
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P +N+L + G +K+ADFG+++ V R + +
Sbjct: 122 HR---VLHRDLKP-----------QNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVT 166
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 108/212 (50%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 61
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P +N+L + G +K+ADFG+++ V R + +
Sbjct: 121 HR---VLHRDLKP-----------QNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVT 165
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 108/212 (50%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 63
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P +N+L + G +K+ADFG+++ V R + +
Sbjct: 123 HR---VLHRDLKP-----------QNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVT 167
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 108/212 (50%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 62
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P +N+L + G +K+ADFG+++ V R + +
Sbjct: 122 HR---VLHRDLKP-----------QNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVT 166
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 108/212 (50%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 64
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P +N+L + G +K+ADFG+++ V R + +
Sbjct: 124 HR---VLHRDLKP-----------QNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVT 168
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 120/252 (47%), Gaps = 23/252 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++ + +P G
Sbjct: 52 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLIMQLMPFG 108
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L +++ K + + + + IA+GMNYL + + ++HRDL RN
Sbjct: 109 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAA-----------RN 154
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG++KLL +E + +++A E + Y + DV+S+ +
Sbjct: 155 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 214
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ +E+ +R P + P + + ++ +CW RP
Sbjct: 215 TVWELMTFGSKPYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRP 271
Query: 413 TFRQIITRLESI 424
FR++I +
Sbjct: 272 KFRELIIEFSKM 283
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 108/212 (50%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 66
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P +N+L + G +K+ADFG+++ V R + +
Sbjct: 126 HR---VLHRDLKP-----------QNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVT 170
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 202
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 108/212 (50%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 62
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P +N+L + G +K+ADFG+++ V R + +
Sbjct: 122 HR---VLHRDLKP-----------QNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVT 166
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 120/252 (47%), Gaps = 23/252 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++ + +P G
Sbjct: 45 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLIMQLMPFG 101
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L +++ K + + + + IA+GMNYL + + ++HRDL RN
Sbjct: 102 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAA-----------RN 147
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG++KLL +E + +++A E + Y + DV+S+ +
Sbjct: 148 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 207
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ +E+ +R P + P + + ++ +CW RP
Sbjct: 208 TVWELMTFGSKPYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRP 264
Query: 413 TFRQIITRLESI 424
FR++I +
Sbjct: 265 KFRELIIEFSKM 276
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 120/252 (47%), Gaps = 23/252 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++ + +P G
Sbjct: 46 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLIMQLMPFG 102
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L +++ K + + + + IA+GMNYL + + ++HRDL RN
Sbjct: 103 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAA-----------RN 148
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG++KLL +E + +++A E + Y + DV+S+ +
Sbjct: 149 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 208
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ +E+ +R P + P + + ++ +CW RP
Sbjct: 209 TVWELMTFGSKPYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRP 265
Query: 413 TFRQIITRLESI 424
FR++I +
Sbjct: 266 KFRELIIEFSKM 277
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 120/252 (47%), Gaps = 23/252 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++ + +P G
Sbjct: 48 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLIMQLMPFG 104
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L +++ K + + + + IA+GMNYL + + ++HRDL RN
Sbjct: 105 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAA-----------RN 150
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG++KLL +E + +++A E + Y + DV+S+ +
Sbjct: 151 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 210
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ +E+ +R P + P + + ++ +CW RP
Sbjct: 211 TVWELMTFGSKPYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRP 267
Query: 413 TFRQIITRLESI 424
FR++I +
Sbjct: 268 KFRELIIEFSKM 279
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 20/215 (9%)
Query: 156 DFTNSVEITKGTF---ILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
DF + KGTF IL + G A+K L +EVI D V E +LQ RHP
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENK 270
+ A + V EY G+L L R+ A + +I + YLH
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 271 PVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 330
+++RD++ N++ D G++K+ DFG+ K + + + +
Sbjct: 126 ---VVYRDIKLE-----------NLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPE 170
Query: 331 YVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 365
Y+APEV ++ +Y VD + +++ EM+ G PF
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 120/252 (47%), Gaps = 23/252 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++ + +P G
Sbjct: 47 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLIMQLMPFG 103
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L +++ K + + + + IA+GMNYL + + ++HRDL RN
Sbjct: 104 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAA-----------RN 149
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG++KLL +E + +++A E + Y + DV+S+ +
Sbjct: 150 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 209
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ +E+ +R P + P + + ++ +CW RP
Sbjct: 210 TVWELMTFGSKPYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRP 266
Query: 413 TFRQIITRLESI 424
FR++I +
Sbjct: 267 KFRELIIEFSKM 278
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 20/215 (9%)
Query: 156 DFTNSVEITKGTF---ILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
DF + KGTF IL + G A+K L +EVI D V E +LQ RHP
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENK 270
+ A + V EY G+L L R+ A + +I + YLH
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 271 PVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 330
+++RD++ N++ D G++K+ DFG+ K + + + +
Sbjct: 126 ---VVYRDIKLE-----------NLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPE 170
Query: 331 YVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 365
Y+APEV ++ +Y VD + +++ EM+ G PF
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 123/290 (42%), Gaps = 35/290 (12%)
Query: 146 PEYEIDPHELDFTNSVEITKGTF-----ILAFWRGIQVAVKKLGEEVISDDDRVRAFRDE 200
PE D D + EI +G + ++ G +AVK++ + + ++ + D
Sbjct: 13 PEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRI-RSTVDEKEQKQLLMDL 71
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR-----KGALKPSTAVRF 255
+++ P +VQF GA+ + I E L F K + +
Sbjct: 72 DVVMRSSDCPYIVQFYGALFREGDCWICME-LMSTSFDKFYKYVYSVLDDVIPEEILGKI 130
Query: 256 ALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLT 315
L + +N+L EN + IIHRD++PS NIL D SGN+K+ DFG+S L
Sbjct: 131 TLATVKALNHLKEN--LKIIHRDIKPS-----------NILLDRSGNIKLCDFGISGQLV 177
Query: 316 VKEDRPLTCQDTSCR-YVAPEVF----KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHD 370
D +D CR Y+APE + YD + DV+S + L E+ G P+ +
Sbjct: 178 ---DSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNS 234
Query: 371 NEVPKAYAARQRPP--FKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
+ PP + + ++ + C + +KRP +++++
Sbjct: 235 VFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELL 284
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 120/252 (47%), Gaps = 23/252 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++ + +P G
Sbjct: 49 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLIMQLMPFG 105
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L +++ K + + + + IA+GMNYL + + ++HRDL RN
Sbjct: 106 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAA-----------RN 151
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG++KLL +E + +++A E + Y + DV+S+ +
Sbjct: 152 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 211
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ +E+ +R P + P + + ++ +CW RP
Sbjct: 212 TVWELMTFGSKPYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRP 268
Query: 413 TFRQIITRLESI 424
FR++I +
Sbjct: 269 KFRELIIEFSKM 280
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 117/247 (47%), Gaps = 23/247 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K L E ++ DE ++ + P V + LG + +S + +VT+ +P G
Sbjct: 47 IPVAIKVLRENTSPKANK--EILDEAYVMAGVGSPYVSRLLG-ICLTSTVQLVTQLMPYG 103
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L ++ +G L + + + IA+GM+YL + V ++HRDL RN
Sbjct: 104 CLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLED---VRLVHRDLAA-----------RN 149
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG+++LL + E + +++A E + + DV+S+ +
Sbjct: 150 VLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGV 209
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ E+P +R P + P + + ++ +CW RP
Sbjct: 210 TVWELMTFGAKPYDGIPAREIPDLLEKGERLP-QPP--ICTIDVYMIMVKCWMIDSECRP 266
Query: 413 TFRQIIT 419
FR++++
Sbjct: 267 RFRELVS 273
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 24/171 (14%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVR-FALD 258
E++LL+ ++H N+V + + +V EYL K DL+ +L G + V+ F
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQ 108
Query: 259 IARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKE 318
+ RG+ Y H K ++HRDL+P +N+L ++ G LK+ADFG+++ ++
Sbjct: 109 LLRGLAYCHRQK---VLHRDLKP-----------QNLLINERGELKLADFGLARAKSI-- 152
Query: 319 DRPLTCQD---TSCRYVAPEV-FKNEEYDTKVDVFSFALILQEMIEGCPPF 365
P D + Y P++ + +Y T++D++ I EM G P F
Sbjct: 153 --PTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLF 201
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 20/215 (9%)
Query: 156 DFTNSVEITKGTF---ILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
DF + KGTF IL + G A+K L +EVI D V E +LQ RHP
Sbjct: 11 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 70
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENK 270
+ A + V EY G+L L R+ A + +I + YLH
Sbjct: 71 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 130
Query: 271 PVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 330
+++RD++ N++ D G++K+ DFG+ K + + + +
Sbjct: 131 ---VVYRDIKLE-----------NLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPE 175
Query: 331 YVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 365
Y+APEV ++ +Y VD + +++ EM+ G PF
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex)
Length = 169
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 63/120 (52%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRD 70
LL+ + D E + NG D + + L A +E ++ LL G DVN D
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAID 77
Query: 71 IDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
I T LH+AA G E+V +LL+ GADV+ D WG TPL A + E++++L KHGA
Sbjct: 78 IXGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGA 137
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%)
Query: 53 VEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGD 112
+E ++ LL G DVN D T LH+AA G E+V +LL+ GADV+ +D++G T
Sbjct: 93 LEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDKFGKTAFDI 152
Query: 113 AIYYKNHEVIKLLEK 127
+I N ++ ++L+K
Sbjct: 153 SIDNGNEDLAEILQK 167
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+++ + + H +VV F G + + +V E + L KR+ AL A + I
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 148
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
G YLH N+ +IHRDL+ +L++ ++ +K+ DFG++ + +
Sbjct: 149 VLGCQYLHRNR---VIHRDLKLGNLFL-----------NEDLEVKIGDFGLATKVEYDGE 194
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAA 379
R T Y+APEV + + +VDV+S I+ ++ G PPF E Y
Sbjct: 195 RKKVLCGTP-NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE---TYLR 250
Query: 380 RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
++ + P + LI++ P RPT +++
Sbjct: 251 IKKNEYSIPKHINPVA-ASLIQKMLQTDPTARPTINELL 288
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 27/224 (12%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G+++AVKKL S R +R EL LL+ ++H NV+ L T ++ + + +
Sbjct: 76 GLKIAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLV 134
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 135 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 187
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 188 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDI 235
Query: 349 FSFALILQEMIEGCPPF-TMKHDNEVPKAYAARQRPPFKAPAKL 391
+S I+ E++ G F H N++ + PP +++
Sbjct: 236 WSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRM 279
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 20/215 (9%)
Query: 156 DFTNSVEITKGTF---ILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
DF + KGTF IL + G A+K L +EVI D V E +LQ RHP
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENK 270
+ A + V EY G+L L R+ A + +I + YLH
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 271 PVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 330
+++RD++ N++ D G++K+ DFG+ K + + + +
Sbjct: 126 ---VVYRDIKLE-----------NLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPE 170
Query: 331 YVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 365
Y+APEV ++ +Y VD + +++ EM+ G PF
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or267.
pdb|4HB5|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or267
Length = 169
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 24 KEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQ 83
K A+ N D DG L + A E +K LL G D N +D D RT LH AA
Sbjct: 59 KGADPNAKDSDGR-----TPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAEN 113
Query: 84 GFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
G E+V LLL +GAD + D G TPL A + N E++KLLEK G
Sbjct: 114 GHKEIVKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLLEKQGG 160
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 53/90 (58%)
Query: 43 RLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPK 102
RL+ A + + +K+LL++G D N D D RT LH AA G E+V LLL +GAD + K
Sbjct: 7 RLIEAAENGNKDRVKDLLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAK 66
Query: 103 DRWGSTPLGDAIYYKNHEVIKLLEKHGAKP 132
D G TPL A + E++KLL GA P
Sbjct: 67 DSDGRTPLHYAAENGHKEIVKLLLSKGADP 96
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 54/104 (51%)
Query: 29 NGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEV 88
NG D + + L + A E +K LL G D N +D D RT LH AA G E+
Sbjct: 26 NGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEI 85
Query: 89 VSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGAKP 132
V LLL +GAD + KD G TPL A + E++KLL GA P
Sbjct: 86 VKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGADP 129
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+++ + + H +VV F G + + +V E + L KR+ AL A + I
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 150
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
G YLH N+ +IHRDL+ +L++ ++ +K+ DFG++ + +
Sbjct: 151 VLGCQYLHRNR---VIHRDLKLGNLFL-----------NEDLEVKIGDFGLATKVEYDGE 196
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAA 379
R T Y+APEV + + +VDV+S I+ ++ G PPF E Y
Sbjct: 197 RKKVLCGTP-NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE---TYLR 252
Query: 380 RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
++ + P + LI++ P RPT +++
Sbjct: 253 IKKNEYSIPKHINPVA-ASLIQKMLQTDPTARPTINELL 290
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 111/229 (48%), Gaps = 21/229 (9%)
Query: 199 DELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFAL 257
DE ++ + +P+V + LG + +S + ++T+ +P G L +++ K + + + +
Sbjct: 100 DEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 158
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVK 317
IA+GMNYL + + ++HRDL RN+L ++K+ DFG++KLL +
Sbjct: 159 QIAKGMNYLEDRR---LVHRDLAA-----------RNVLVKTPQHVKITDFGLAKLLGAE 204
Query: 318 E-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPK 375
E + +++A E + Y + DV+S+ + + E++ G P+ +E+
Sbjct: 205 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 264
Query: 376 AYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+R P + P + + ++ +CW RP FR++I +
Sbjct: 265 ILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 310
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 107/212 (50%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 64
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R + +
Sbjct: 124 HR---VLHRDLKP-----------ENLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVT 168
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 107/212 (50%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 63
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R + +
Sbjct: 123 HR---VLHRDLKP-----------ENLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVT 167
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 119/277 (42%), Gaps = 34/277 (12%)
Query: 156 DFTNSVEITKGTFILAFWR------GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRH 209
D N E+ GT W+ G +AVK++ ++++ R D +L+
Sbjct: 26 DLENLGEMGSGT-CGQVWKMRFRKTGHVIAVKQMRRSGNKEENK-RILMDLDVVLKSHDC 83
Query: 210 PNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHEN 269
P +VQ G ++ + I E + + + +G + + + I + + YL E
Sbjct: 84 PYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK 143
Query: 270 KPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLT--VKEDRPLTCQDT 327
V IHRD++PS NIL D+ G +K+ DFG+S L +DR C
Sbjct: 144 HGV--IHRDVKPS-----------NILLDERGQIKLCDFGISGRLVDDKAKDRSAGC--- 187
Query: 328 SCRYVAPEVF-----KNEEYDTKVDVFSFALILQEMIEGCPPF-TMKHDNEVPKAYAARQ 381
Y+APE +YD + DV+S + L E+ G P+ K D EV ++
Sbjct: 188 -AAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEV-LTKVLQE 245
Query: 382 RPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
PP ++ + +++C + KRP + +++
Sbjct: 246 EPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLL 282
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 124/300 (41%), Gaps = 56/300 (18%)
Query: 166 GTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRD-ELALLQKIRHPNVVQFLGA----VT 220
G + WRG +VAVK V + FR+ E+ +RH N++ F+ A
Sbjct: 51 GEVWMGKWRGEKVAVK-----VFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTG 105
Query: 221 QSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLH------ENKPVPI 274
+ + ++T+Y G L +LK L + ++ A G+ +LH + KP I
Sbjct: 106 SWTQLYLITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA-I 163
Query: 275 IHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVS-KLL--TVKEDRPLTCQDTSCRY 331
HRDL+ +NIL +G +AD G++ K + T + D P + + RY
Sbjct: 164 AHRDLK-----------SKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRY 212
Query: 332 VAPEVFKNE------EYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPK---------- 375
+ PEV + D++SF LIL E+ C + + ++P
Sbjct: 213 MPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSY 272
Query: 376 ------AYAARQRPPF--KAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 427
+ RP F + + R + +L+ ECW PA R T ++ L ++ S
Sbjct: 273 EDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332
>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein
pdb|4ATZ|E Chain E, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein
pdb|4ATZ|F Chain F, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein
Length = 154
Score = 70.5 bits (171), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/120 (37%), Positives = 66/120 (55%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRD 70
LL+ + D E + NG D + + L A +E ++ LL +G DVN D
Sbjct: 6 LLEAARAGQDDEVRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVD 65
Query: 71 IDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
+ T LH+AA G E+V +LL+ GADV+ KD G TPL A Y+ + E++++L KHGA
Sbjct: 66 TNGTTPLHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGA 125
Score = 55.1 bits (131), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 58/104 (55%), Gaps = 5/104 (4%)
Query: 23 RKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAAC 82
R A++N +D +G L A+ +E ++ LL G DVN +D T L++AA
Sbjct: 56 RNGADVNAVDTNGTT-----PLHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAY 110
Query: 83 QGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLE 126
G E+V +LL+ GADV+ +D++G T +I N ++ ++L+
Sbjct: 111 WGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDIGNEDLAEILQ 154
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 107/212 (50%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 65
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L DL+ F+ P ++ + + +G+ + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P +N+L + G +K+ADFG+++ V R + +
Sbjct: 125 HR---VLHRDLKP-----------QNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVT 169
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 107/212 (50%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 64
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L DL+ F+ P ++ + + +G+ + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P +N+L + G +K+ADFG+++ V R + +
Sbjct: 124 HR---VLHRDLKP-----------QNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVT 168
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 106/212 (50%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 63
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L DL+ F+ P ++ + + +G+ + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R + +
Sbjct: 123 HR---VLHRDLKP-----------ENLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVT 167
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 106/212 (50%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 65
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L DL+ F+ P ++ + + +G+ + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R + +
Sbjct: 125 HR---VLHRDLKP-----------ENLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVT 169
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 91/191 (47%), Gaps = 17/191 (8%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 56 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 115
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL
Sbjct: 116 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKP-----------ENIL 161
Query: 297 RDDSGNLKVADFGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
++ ++++ DFG +K+L+ K+ R + T+ +YV+PE+ + D+++ I
Sbjct: 162 LNEDMHIQITDFGTAKVLSPESKQARANSFVGTA-QYVSPELLTEKSACKSSDLWALGCI 220
Query: 355 LQEMIEGCPPF 365
+ +++ G PPF
Sbjct: 221 IYQLVAGLPPF 231
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 107/212 (50%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 62
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R + +
Sbjct: 122 HR---VLHRDLKP-----------ENLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVT 166
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 119/252 (47%), Gaps = 23/252 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++ + +P G
Sbjct: 47 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLIMQLMPFG 103
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L +++ K + + + + IA+GMNYL + + ++HRDL RN
Sbjct: 104 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAA-----------RN 149
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG +KLL +E + +++A E + Y + DV+S+ +
Sbjct: 150 VLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 209
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ +E+ +R P + P + + ++ +CW RP
Sbjct: 210 TVWELMTFGSKPYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMRKCWMIDADSRP 266
Query: 413 TFRQIITRLESI 424
FR++I +
Sbjct: 267 KFRELIIEFSKM 278
>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin
pdb|4DRX|F Chain F, Gtp-Tubulin In Complex With A Darpin
Length = 169
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 63/120 (52%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRD 70
LL+ + D E + NG D + + L A +E ++ LL G DVN D
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAID 77
Query: 71 IDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
I T LH+AA G E+V +LL+ GADV+ D WG TPL A + E++++L KHGA
Sbjct: 78 IMGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGA 137
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%)
Query: 53 VEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGD 112
+E ++ LL G DVN D T LH+AA G E+V +LL+ GADV+ +D++G T
Sbjct: 93 LEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDKFGKTAFDI 152
Query: 113 AIYYKNHEVIKLLEK 127
+I N ++ ++L+K
Sbjct: 153 SIDNGNEDLAEILQK 167
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 42/207 (20%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIR-HPNVVQFLGAV--------TQSSPM 225
G + A+K+L + +++++ RA E+ ++K+ HPN+VQF A T +
Sbjct: 53 GREYALKRL---LSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEF 109
Query: 226 MIVTEYLPKGDLRAFLKR---KGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+++TE L KG L FLK+ +G L T ++ R + ++H KP PIIHRDL+
Sbjct: 110 LLLTE-LCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKP-PIIHRDLKV- 166
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ-----------DTSCRY 331
N+L + G +K+ DFG + ++ D + Q +T+ Y
Sbjct: 167 ----------ENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMY 216
Query: 332 VAPEV---FKNEEYDTKVDVFSFALIL 355
PE+ + N K D+++ IL
Sbjct: 217 RTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 26/197 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 106 THLMGADLNNIVKXQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 158
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 159 --------NEDXELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 206
Query: 349 FSFALILQEMIEGCPPF 365
+S I+ E++ G F
Sbjct: 207 WSVGCIMAELLTGRTLF 223
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 74/166 (44%), Gaps = 16/166 (9%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
EL +L + P +V F GA + I E++ G L LK + + ++ +
Sbjct: 64 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAV 123
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
RG+ YL E I+HRD++PS NIL + G +K+ DFGVS L D
Sbjct: 124 LRGLAYLREKH--QIMHRDVKPS-----------NILVNSRGEIKLCDFGVSGQLI---D 167
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 365
+ Y+APE + Y + D++S L L E+ G P
Sbjct: 168 SMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 106 THLMGADLNNIVKSQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 158
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+ + D +T + Y APE+ N Y+ VD+
Sbjct: 159 --------NEDSELKILDFGLCR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 206
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 207 WSVGCIMAELLTG 219
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 109/237 (45%), Gaps = 21/237 (8%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 118
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL
Sbjct: 119 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKP-----------ENIL 164
Query: 297 RDDSGNLKVADFGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
++ ++++ DFG +K+L+ K+ R T+ +YV+PE+ + D+++ I
Sbjct: 165 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSAXKSSDLWALGCI 223
Query: 355 LQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKR 411
+ +++ G PPF ++ + +A + + P K + + ++L+E+ KR
Sbjct: 224 IYQLVAGLPPFRAGNEGLI---FAKIIKLEYDFPEKFFPKA-RDLVEKLLVLDATKR 276
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 91/191 (47%), Gaps = 17/191 (8%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 60 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 119
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL
Sbjct: 120 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKP-----------ENIL 165
Query: 297 RDDSGNLKVADFGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
++ ++++ DFG +K+L+ K+ R + T+ +YV+PE+ + D+++ I
Sbjct: 166 LNEDMHIQITDFGTAKVLSPESKQARANSFVGTA-QYVSPELLTEKSACKSSDLWALGCI 224
Query: 355 LQEMIEGCPPF 365
+ +++ G PPF
Sbjct: 225 IYQLVAGLPPF 235
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 106 THLMGADLNNIVKXQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 158
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 159 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 206
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 207 WSVGCIMAELLTG 219
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 111
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 112 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 164
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 165 --------NEDSELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 212
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 213 WSVGCIMAELLTG 225
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 107
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 108 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 160
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 161 --------NEDSELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 208
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 209 WSVGCIMAELLTG 221
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 111
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 112 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 164
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 165 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 212
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 213 WSVGCIMAELLTG 225
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 119/252 (47%), Gaps = 23/252 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++ + +P G
Sbjct: 47 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLIMQLMPFG 103
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L +++ K + + + + IA+GMNYL + + ++HRDL RN
Sbjct: 104 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAA-----------RN 149
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG +KLL +E + +++A E + Y + DV+S+ +
Sbjct: 150 VLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 209
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ +E+ +R P + P + + ++ +CW RP
Sbjct: 210 TVWELMTFGSKPYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRP 266
Query: 413 TFRQIITRLESI 424
FR++I +
Sbjct: 267 KFRELIIEFSKM 278
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL + S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 59 GLRVAVKKLSKPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 117
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 118 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 170
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 171 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 218
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 219 WSVGCIMAELLTG 231
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 108/212 (50%), Gaps = 25/212 (11%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 65
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E++ + DL+ F+ P ++ + + +G+ + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 328
++ ++HRDL+P +N+L + G +K+ADFG+++ V R + +
Sbjct: 125 HR---VLHRDLKP-----------QNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVT 169
Query: 329 CRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 359
Y APE+ + Y T VD++S I EM+
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 116
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL
Sbjct: 117 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKP-----------ENIL 162
Query: 297 RDDSGNLKVADFGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
++ ++++ DFG +K+L+ K+ R T+ +YV+PE+ + D+++ I
Sbjct: 163 LNEDMHIQITDFGTAKVLSPESKQARANAFVGTA-QYVSPELLTEKSACKSSDLWALGCI 221
Query: 355 LQEMIEGCPPF 365
+ +++ G PPF
Sbjct: 222 IYQLVAGLPPF 232
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 92/220 (41%), Gaps = 19/220 (8%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPS----TAVRF 255
E +L K+ +V A + + +V + GD+R + P A+ +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 256 ALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLT 315
I G+ +LH+ II+RDL+P N+L DD GN++++D G++ L
Sbjct: 295 TAQIVSGLEHLHQRN---IIYRDLKPE-----------NVLLDDDGNVRISDLGLAVELK 340
Query: 316 VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPK 375
+ + T ++APE+ EEYD VD F+ + L EMI PF + + K
Sbjct: 341 AGQTKTKGYAGTP-GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK 399
Query: 376 AYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 415
R ++ K+ E + P KR FR
Sbjct: 400 ELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFR 439
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGC 118
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL
Sbjct: 119 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKP-----------ENIL 164
Query: 297 RDDSGNLKVADFGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
++ ++++ DFG +K+L+ K+ R + T+ +YV+PE+ + D+++ I
Sbjct: 165 LNEDMHIQITDFGTAKVLSPESKQARANSFVGTA-QYVSPELLTEKSASKSSDLWALGCI 223
Query: 355 LQEMIEGCPPF 365
+ +++ G PPF
Sbjct: 224 IYQLVAGLPPF 234
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 158
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 159 --------NEDCELKILDFGLAR----HTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDI 206
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 207 WSVGCIMAELLTG 219
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 94/205 (45%), Gaps = 34/205 (16%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKI---RHPNVVQF------LGAVTQSSPM 225
G+ VA+KK + D R R EL ++Q + HPN+VQ LG +
Sbjct: 48 GMSVAIKK-----VIQDPRFR--NRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIY 100
Query: 226 M-IVTEYLPKG---DLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEP 281
+ +V EY+P R + +R+ A P F + R + LH V + HRD++P
Sbjct: 101 LNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS-VNVCHRDIKP 159
Query: 282 SDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPE-VFKNE 340
++ V + G LK+ DFG +K L+ E P S Y APE +F N+
Sbjct: 160 HNVLV----------NEADGTLKLCDFGSAKKLSPSE--PNVAYICSRYYRAPELIFGNQ 207
Query: 341 EYDTKVDVFSFALILQEMIEGCPPF 365
Y T VD++S I EM+ G P F
Sbjct: 208 HYTTAVDIWSVGCIFAEMMLGEPIF 232
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 119/252 (47%), Gaps = 23/252 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++ + +P G
Sbjct: 49 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLIMQLMPFG 105
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
L +++ K + + + + IA+GMNYL + + ++HRDL RN
Sbjct: 106 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAA-----------RN 151
Query: 295 ILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+L ++K+ DFG +KLL +E + +++A E + Y + DV+S+ +
Sbjct: 152 VLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 211
Query: 354 ILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 412
+ E++ G P+ +E+ +R P + P + + ++ +CW RP
Sbjct: 212 TVWELMTFGSKPYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRP 268
Query: 413 TFRQIITRLESI 424
FR++I +
Sbjct: 269 KFRELIIEFSKM 280
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 56 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 115
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL
Sbjct: 116 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKP-----------ENIL 161
Query: 297 RDDSGNLKVADFGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
++ ++++ DFG +K+L+ K+ R T+ +YV+PE+ + D+++ I
Sbjct: 162 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCI 220
Query: 355 LQEMIEGCPPF 365
+ +++ G PPF
Sbjct: 221 IYQLVAGLPPF 231
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 92/220 (41%), Gaps = 19/220 (8%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPS----TAVRF 255
E +L K+ +V A + + +V + GD+R + P A+ +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 256 ALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLT 315
I G+ +LH+ II+RDL+P N+L DD GN++++D G++ L
Sbjct: 295 TAQIVSGLEHLHQRN---IIYRDLKP-----------ENVLLDDDGNVRISDLGLAVELK 340
Query: 316 VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPK 375
+ + T ++APE+ EEYD VD F+ + L EMI PF + + K
Sbjct: 341 AGQTKTKGYAGTPG-FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK 399
Query: 376 AYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 415
R ++ K+ E + P KR FR
Sbjct: 400 ELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFR 439
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 92/220 (41%), Gaps = 19/220 (8%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPS----TAVRF 255
E +L K+ +V A + + +V + GD+R + P A+ +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 256 ALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLT 315
I G+ +LH+ II+RDL+P N+L DD GN++++D G++ L
Sbjct: 295 TAQIVSGLEHLHQRN---IIYRDLKP-----------ENVLLDDDGNVRISDLGLAVELK 340
Query: 316 VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPK 375
+ + T ++APE+ EEYD VD F+ + L EMI PF + + K
Sbjct: 341 AGQTKTKGYAGTP-GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK 399
Query: 376 AYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 415
R ++ K+ E + P KR FR
Sbjct: 400 ELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFR 439
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 109/237 (45%), Gaps = 21/237 (8%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 118
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL
Sbjct: 119 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKP-----------ENIL 164
Query: 297 RDDSGNLKVADFGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
++ ++++ DFG +K+L+ K+ R T+ +YV+PE+ + D+++ I
Sbjct: 165 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCI 223
Query: 355 LQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKR 411
+ +++ G PPF ++ + +A + + P K + + ++L+E+ KR
Sbjct: 224 IYQLVAGLPPFRAGNEGLI---FAKIIKLEYDFPEKFFPKA-RDLVEKLLVLDATKR 276
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 28/194 (14%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFAL-DIARGMNYLHENKPVPIIHRDLEPSDLYVAY 288
+L DL +K + V+F + I RG+ Y+H IIHRDL+PS+L V
Sbjct: 106 THLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV-- 158
Query: 289 WQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNE-EYDTKVD 347
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD
Sbjct: 159 ---------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNAMHYNQTVD 205
Query: 348 VFSFALILQEMIEG 361
++S I+ E++ G
Sbjct: 206 IWSVGCIMAELLTG 219
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 27/243 (11%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+K L + I + R E+ + + HPN+++ + ++ EY P+G+L
Sbjct: 51 VALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGEL 110
Query: 238 RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILR 297
L++ ++A + Y H K +IHRD++P N+L
Sbjct: 111 YKELQKSCTFDEQRTATIMEELADALMYCHGKK---VIHRDIKPE-----------NLLL 156
Query: 298 DDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR---YVAPEVFKNEEYDTKVDVFSFALI 354
G LK+ADFG S P + T C Y+ PE+ + ++ KVD++ ++
Sbjct: 157 GLKGELKIADFGWSV------HAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVL 210
Query: 355 LQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTF 414
E++ G PPF NE Y + K PA + G ++LI + P++R
Sbjct: 211 CYELLVGNPPFESASHNE---TYRRIVKVDLKFPASV-PTGAQDLISKLLRHNPSERLPL 266
Query: 415 RQI 417
Q+
Sbjct: 267 AQV 269
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 41 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 100
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL
Sbjct: 101 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKP-----------ENIL 146
Query: 297 RDDSGNLKVADFGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
++ ++++ DFG +K+L+ K+ R T+ +YV+PE+ + D+++ I
Sbjct: 147 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCI 205
Query: 355 LQEMIEGCPPF 365
+ +++ G PPF
Sbjct: 206 IYQLVAGLPPF 216
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 43 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 101
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 102 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 154
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 155 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 202
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 203 WSVGCIMAELLTG 215
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 116
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL
Sbjct: 117 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKP-----------ENIL 162
Query: 297 RDDSGNLKVADFGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
++ ++++ DFG +K+L+ K+ R T+ +YV+PE+ + D+++ I
Sbjct: 163 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCI 221
Query: 355 LQEMIEGCPPF 365
+ +++ G PPF
Sbjct: 222 IYQLVAGLPPF 232
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 111
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 112 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 164
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 165 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 212
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 213 WSVGCIMAELLTG 225
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 92/220 (41%), Gaps = 19/220 (8%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPS----TAVRF 255
E +L K+ +V A + + +V + GD+R + P A+ +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 256 ALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLT 315
I G+ +LH+ II+RDL+P N+L DD GN++++D G++ L
Sbjct: 295 TAQIVSGLEHLHQRN---IIYRDLKP-----------ENVLLDDDGNVRISDLGLAVELK 340
Query: 316 VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPK 375
+ + T ++APE+ EEYD VD F+ + L EMI PF + + K
Sbjct: 341 AGQTKTKGYAGTP-GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK 399
Query: 376 AYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 415
R ++ K+ E + P KR FR
Sbjct: 400 ELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFR 439
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 44 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 102
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 103 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 155
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 156 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 203
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 204 WSVGCIMAELLTG 216
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 26/195 (13%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVTEY 231
+VAVKKL S R +R EL LL+ ++H NV+ L T ++ + + +
Sbjct: 55 KVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT 113
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
L DL +K + AL + RG+ Y+H IIHRDL+PS
Sbjct: 114 LMGADLNNIVKSQ-ALSDEHVQFLVYQLLRGLKYIHS---AGIIHRDLKPS--------- 160
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFS 350
N+ ++ L++ DFG+++ + D +T + Y APE+ N Y+ VD++S
Sbjct: 161 --NVAVNEDSELRILDFGLAR----QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 214
Query: 351 FALILQEMIEGCPPF 365
I+ E+++G F
Sbjct: 215 VGCIMAELLQGKALF 229
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 107
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 108 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 160
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 161 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 208
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 209 WSVGCIMAELLTG 221
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 44 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 102
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 103 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 155
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 156 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 203
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 204 WSVGCIMAELLTG 216
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 110
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 111 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 163
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 164 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 211
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 212 WSVGCIMAELLTG 224
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 35 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 94
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL
Sbjct: 95 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPE-----------NIL 140
Query: 297 RDDSGNLKVADFGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
++ ++++ DFG +K+L+ K+ R T+ +YV+PE+ + D+++ I
Sbjct: 141 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCI 199
Query: 355 LQEMIEGCPPF 365
+ +++ G PPF
Sbjct: 200 IYQLVAGLPPF 210
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 64 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGE 123
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL
Sbjct: 124 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKP-----------ENIL 169
Query: 297 RDDSGNLKVADFGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
++ ++++ DFG +K+L+ K+ R T+ +YV+PE+ + D+++ I
Sbjct: 170 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCI 228
Query: 355 LQEMIEGCPPF 365
+ +++ G PPF
Sbjct: 229 IYQLVAGLPPF 239
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 116
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL
Sbjct: 117 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKP-----------ENIL 162
Query: 297 RDDSGNLKVADFGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
++ ++++ DFG +K+L+ K+ R T+ +YV+PE+ + D+++ I
Sbjct: 163 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCI 221
Query: 355 LQEMIEGCPPF 365
+ +++ G PPF
Sbjct: 222 IYQLVAGLPPF 232
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 58 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 116
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 117 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 169
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 170 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 217
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 218 WSVGCIMAELLTG 230
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 34 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 93
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL
Sbjct: 94 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPE-----------NIL 139
Query: 297 RDDSGNLKVADFGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
++ ++++ DFG +K+L+ K+ R T+ +YV+PE+ + D+++ I
Sbjct: 140 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCI 198
Query: 355 LQEMIEGCPPF 365
+ +++ G PPF
Sbjct: 199 IYQLVAGLPPF 209
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 118
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL
Sbjct: 119 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKP-----------ENIL 164
Query: 297 RDDSGNLKVADFGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
++ ++++ DFG +K+L+ K+ R T+ +YV+PE+ + D+++ I
Sbjct: 165 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCI 223
Query: 355 LQEMIEGCPPF 365
+ +++ G PPF
Sbjct: 224 IYQLVAGLPPF 234
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 118
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL
Sbjct: 119 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKP-----------ENIL 164
Query: 297 RDDSGNLKVADFGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
++ ++++ DFG +K+L+ K+ R T+ +YV+PE+ + D+++ I
Sbjct: 165 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCI 223
Query: 355 LQEMIEGCPPF 365
+ +++ G PPF
Sbjct: 224 IYQLVAGLPPF 234
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 116
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL
Sbjct: 117 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKP-----------ENIL 162
Query: 297 RDDSGNLKVADFGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
++ ++++ DFG +K+L+ K+ R T+ +YV+PE+ + D+++ I
Sbjct: 163 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCI 221
Query: 355 LQEMIEGCPPF 365
+ +++ G PPF
Sbjct: 222 IYQLVAGLPPF 232
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 118
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL
Sbjct: 119 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKP-----------ENIL 164
Query: 297 RDDSGNLKVADFGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
++ ++++ DFG +K+L+ K+ R T+ +YV+PE+ + D+++ I
Sbjct: 165 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCI 223
Query: 355 LQEMIEGCPPF 365
+ +++ G PPF
Sbjct: 224 IYQLVAGLPPF 234
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 158
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 159 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 206
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 207 WSVGCIMAELLTG 219
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 110
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 111 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 163
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 164 --------NEDXELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 211
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 212 WSVGCIMAELLTG 224
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 28/194 (14%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFAL-DIARGMNYLHENKPVPIIHRDLEPSDLYVAY 288
+L DL +K + V+F + I RG+ Y+H IIHRDL+PS+L V
Sbjct: 106 THLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV-- 158
Query: 289 WQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVD 347
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD
Sbjct: 159 ---------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 348 VFSFALILQEMIEG 361
++S I+ E++ G
Sbjct: 206 IWSVGCIMAELLTG 219
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 60 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 119
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL
Sbjct: 120 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKP-----------ENIL 165
Query: 297 RDDSGNLKVADFGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
++ ++++ DFG +K+L+ K+ R T+ +YV+PE+ + D+++ I
Sbjct: 166 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCI 224
Query: 355 LQEMIEGCPPF 365
+ +++ G PPF
Sbjct: 225 IYQLVAGLPPF 235
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 58 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 116
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 117 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 169
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 170 --------NEDXELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 217
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 218 WSVGCIMAELLTG 230
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 70 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 128
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 129 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 181
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 182 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 229
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 230 WSVGCIMAELLTG 242
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 158
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 159 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 206
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 207 WSVGCIMAELLTG 219
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 158
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 159 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 206
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 207 WSVGCIMAELLTG 219
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 36 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 95
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL
Sbjct: 96 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPE-----------NIL 141
Query: 297 RDDSGNLKVADFGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
++ ++++ DFG +K+L+ K+ R T+ +YV+PE+ + D+++ I
Sbjct: 142 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCI 200
Query: 355 LQEMIEGCPPF 365
+ +++ G PPF
Sbjct: 201 IYQLVAGLPPF 211
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 45 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 103
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 104 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 156
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 157 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 204
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 205 WSVGCIMAELLTG 217
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 59 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 117
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 118 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 170
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 171 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 218
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 219 WSVGCIMAELLTG 231
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 59 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 117
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 118 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 170
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 171 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 218
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 219 WSVGCIMAELLTG 231
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 110
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 111 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 163
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 164 --------NEDXELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 211
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 212 WSVGCIMAELLTG 224
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 37 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 96
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL
Sbjct: 97 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPE-----------NIL 142
Query: 297 RDDSGNLKVADFGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
++ ++++ DFG +K+L+ K+ R T+ +YV+PE+ + D+++ I
Sbjct: 143 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCI 201
Query: 355 LQEMIEGCPPF 365
+ +++ G PPF
Sbjct: 202 IYQLVAGLPPF 212
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 67 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 125
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 126 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 178
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 179 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 226
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 227 WSVGCIMAELLTG 239
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 62 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 121
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL
Sbjct: 122 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKP-----------ENIL 167
Query: 297 RDDSGNLKVADFGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
++ ++++ DFG +K+L+ K+ R T+ +YV+PE+ + D+++ I
Sbjct: 168 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCI 226
Query: 355 LQEMIEGCPPF 365
+ +++ G PPF
Sbjct: 227 IYQLVAGLPPF 237
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 158
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 159 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 206
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 207 WSVGCIMAELLTG 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 112
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 113 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 165
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 166 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 213
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 214 WSVGCIMAELLTG 226
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 107
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 108 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 160
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 161 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 208
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 209 WSVGCIMAELLTG 221
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 66 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 124
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 125 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 177
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 178 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 225
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 226 WSVGCIMAELLTG 238
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 110
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 111 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 163
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 164 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 211
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 212 WSVGCIMAELLTG 224
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 28/194 (14%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFAL-DIARGMNYLHENKPVPIIHRDLEPSDLYVAY 288
+L DL +K + V+F + I RG+ Y+H IIHRDL+PS+L V
Sbjct: 106 THLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV-- 158
Query: 289 WQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVD 347
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD
Sbjct: 159 ---------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 348 VFSFALILQEMIEG 361
++S I+ E++ G
Sbjct: 206 IWSVGCIMAELLTG 219
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 46 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 104
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 105 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 157
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 158 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 205
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 206 WSVGCIMAELLTG 218
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 16/173 (9%)
Query: 197 FRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL-RAFLKRKGA---LKPSTA 252
+ E ++ ++HP++V+ L + + +V E++ DL +KR A + A
Sbjct: 73 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 132
Query: 253 VRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK 312
+ I + Y H+N IIHRD++P ++ +A +N S +K+ DFGV+
Sbjct: 133 SHYMRQILEALRYCHDNN---IIHRDVKPENVLLASKEN--------SAPVKLGDFGVAI 181
Query: 313 LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 365
L + + + ++APEV K E Y VDV+ +IL ++ GC PF
Sbjct: 182 QLG-ESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 113/247 (45%), Gaps = 20/247 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G++ A K + + +S D + R E + +K++HPN+V+ ++ + S +V + +
Sbjct: 31 GLEFAAKIINTKKLSARDFQKLER-EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 89
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G+L + + + A I + Y H N I+HR+L+P +L +A
Sbjct: 90 GELFEDIVAREFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLAS------ 140
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+ +K+ADFG++ + V + + Y++PEV K + Y VD+++ +I
Sbjct: 141 --KAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVI 196
Query: 355 LQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLY---ARGLKELIEECWNEKPAKR 411
L ++ G PPF D + + YA + + P+ + K LI+ P KR
Sbjct: 197 LYILLVGYPPFW---DEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKR 253
Query: 412 PTFRQII 418
T Q +
Sbjct: 254 ITADQAL 260
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 158
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 159 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 206
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 207 WSVGCIMAELLTG 219
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 107
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 108 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 160
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 161 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 208
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 209 WSVGCIMAELLTG 221
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 17/164 (10%)
Query: 209 HPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHE 268
HPN+V+ +V E L G+L +K+K + A + ++++H+
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHD 124
Query: 269 NKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNL--KVADFGVSKLLTVKEDRPLTCQD 326
V ++HRDL+P +L + D++ NL K+ DFG ++L +++PL
Sbjct: 125 ---VGVVHRDLKPENL----------LFTDENDNLEIKIIDFGFARL-KPPDNQPLKTPC 170
Query: 327 TSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHD 370
+ Y APE+ YD D++S +IL M+ G PF HD
Sbjct: 171 FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPF-QSHD 213
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 113/247 (45%), Gaps = 20/247 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G++ A K + + +S D + R E + +K++HPN+V+ ++ + S +V + +
Sbjct: 30 GLEFAAKIINTKKLSARDFQKLER-EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 88
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G+L + + + A I + Y H N I+HR+L+P +L +A
Sbjct: 89 GELFEDIVAREFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLAS------ 139
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+ +K+ADFG++ + V + + Y++PEV K + Y VD+++ +I
Sbjct: 140 --KAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVI 195
Query: 355 LQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLY---ARGLKELIEECWNEKPAKR 411
L ++ G PPF D + + YA + + P+ + K LI+ P KR
Sbjct: 196 LYILLVGYPPFW---DEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKR 252
Query: 412 PTFRQII 418
T Q +
Sbjct: 253 ITADQAL 259
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 113/247 (45%), Gaps = 20/247 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G++ A K + + +S D + R E + +K++HPN+V+ ++ + S +V + +
Sbjct: 31 GLEFAAKIINTKKLSARDFQKLER-EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 89
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G+L + + + A I + Y H N I+HR+L+P +L +A
Sbjct: 90 GELFEDIVAREFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLAS------ 140
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+ +K+ADFG++ + V + + Y++PEV K + Y VD+++ +I
Sbjct: 141 --KAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVI 196
Query: 355 LQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLY---ARGLKELIEECWNEKPAKR 411
L ++ G PPF D + + YA + + P+ + K LI+ P KR
Sbjct: 197 LYILLVGYPPFW---DEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKR 253
Query: 412 PTFRQII 418
T Q +
Sbjct: 254 ITADQAL 260
>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r
pdb|2Y0B|H Chain H, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r
Length = 136
Score = 68.6 bits (166), Expect = 7e-12, Method: Composition-based stats.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 5/102 (4%)
Query: 26 AELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGF 85
A++N +DD G + P L A +E ++ LL G DVN RDI RT LH+AA G
Sbjct: 38 ADVNAMDDAG--VTP---LHLAAKRGHLEIVEVLLKHGADVNARDIWGRTPLHLAATVGH 92
Query: 86 TEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEK 127
E+V +LLE GADV+ +D++G T +I N ++ ++L+K
Sbjct: 93 LEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 60.1 bits (144), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 56 IKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIY 115
++ L+ +G DVN D T LH+AA +G E+V +LL+ GADV+ +D WG TPL A
Sbjct: 30 VRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWGRTPLHLAAT 89
Query: 116 YKNHEVIKLLEKHGA 130
+ E++++L ++GA
Sbjct: 90 VGHLEIVEVLLEYGA 104
Score = 34.7 bits (78), Expect = 0.13, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 84 GFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
G + V +L+ GADV+ D G TPL A + E++++L KHGA
Sbjct: 25 GQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGA 71
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+ +L++IRHPN++ + ++++ E + G+L FL K +L A +F I
Sbjct: 65 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 124
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
G++YLH + I H DL+P ++ + D+N+ + +K+ DFG++ ++
Sbjct: 125 LDGVHYLHSKR---IAHFDLKPENIMLL----DKNV---PNPRIKLIDFGIAH--KIEAG 172
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 365
+ +VAPE+ E + D++S +I ++ G PF
Sbjct: 173 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 112/247 (45%), Gaps = 20/247 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G++ A K + + +S D + E + +K++HPN+V+ ++ + S +V + +
Sbjct: 54 GLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 112
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
G+L + + + A I + Y H N I+HR+L+P +L +A
Sbjct: 113 GELFEDIVAREFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLAS------ 163
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 354
+ +K+ADFG++ + V + + Y++PEV K + Y VD+++ +I
Sbjct: 164 --KAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVI 219
Query: 355 LQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLY---ARGLKELIEECWNEKPAKR 411
L ++ G PPF D + + YA + + P+ + K LI+ P KR
Sbjct: 220 LYILLVGYPPF---WDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKR 276
Query: 412 PTFRQII 418
T Q +
Sbjct: 277 ITADQAL 283
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 134/303 (44%), Gaps = 51/303 (16%)
Query: 134 MAPMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEE 186
MAP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 21 MAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKD 79
Query: 187 VISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDL 237
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 80 RISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDL 136
Query: 238 RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILR 297
F+ +GAL+ A F + + + H ++HRD++ D NIL
Sbjct: 137 FDFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIK-----------DENILI 182
Query: 298 D-DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALIL 355
D + G LK+ DFG LL +D T D + Y PE + Y + V+S ++L
Sbjct: 183 DLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 239
Query: 356 QEMIEGCPPFTMKHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTF 414
+M+ G PF +HD E+ + RQR + + LI C +P+ RPTF
Sbjct: 240 YDMVCGDIPF--EHDEEIIRGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTF 288
Query: 415 RQI 417
+I
Sbjct: 289 EEI 291
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+ +L++IRHPN++ + ++++ E + G+L FL K +L A +F I
Sbjct: 58 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 117
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
G++YLH + I H DL+P ++ + D+N+ + +K+ DFG++ ++
Sbjct: 118 LDGVHYLHSKR---IAHFDLKPENIMLL----DKNV---PNPRIKLIDFGIAH--KIEAG 165
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 365
+ +VAPE+ E + D++S +I ++ G PF
Sbjct: 166 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure
Length = 115
Score = 68.6 bits (166), Expect = 8e-12, Method: Composition-based stats.
Identities = 36/77 (46%), Positives = 49/77 (63%)
Query: 54 EGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDA 113
E +K+LL G DVN R D T LH+AA G E+V LLL +GADV+ + + G+TP A
Sbjct: 23 EEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLA 82
Query: 114 IYYKNHEVIKLLEKHGA 130
+HE++KLL+ GA
Sbjct: 83 KKNGHHEIVKLLDAKGA 99
Score = 45.8 bits (107), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 24 KEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQ 83
K A++N DG L A E +K LL G DVN R D T H+A
Sbjct: 31 KGADVNARSKDGNT-----PLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKN 85
Query: 84 GFTEVVSLLLERGADVDPKDRWGST 108
G E+V LL +GADV+ + WGS+
Sbjct: 86 GHHEIVKLLDAKGADVNARS-WGSS 109
Score = 45.1 bits (105), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 34/59 (57%)
Query: 72 DNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
D T LH AA G E V LL +GADV+ + + G+TPL A + E++KLL GA
Sbjct: 8 DGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGA 66
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 27/176 (15%)
Query: 200 ELALLQKIR---HPNVVQFLGAVTQSSP-----MMIVTEYLPKGDLRAFLKRKG--ALKP 249
E+ALL+++ HPNVV+ + S + +V E++ + DLR +L + L
Sbjct: 61 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 119
Query: 250 STAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFG 309
T RG+++LH N I+HRDL+P NIL G +K+ADFG
Sbjct: 120 ETIKDLMRQFLRGLDFLHANC---IVHRDLKPE-----------NILVTSGGTVKLADFG 165
Query: 310 VSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 365
++++ + + LT + Y APEV Y T VD++S I EM P F
Sbjct: 166 LARIYSYQMA--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 219
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 97/205 (47%), Gaps = 30/205 (14%)
Query: 178 VAVKKL--GEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
VAVK + GE++ D+ V+ E+ + +RHPN+V+F + + + IV EY G
Sbjct: 47 VAVKYIERGEKI---DENVKR---EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGG 100
Query: 236 DLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNI 295
+L + G A F + G++Y H + + HRDL+ N
Sbjct: 101 ELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ---VCHRDLKL-----------ENT 146
Query: 296 LRDDS--GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKV-DVFSFA 352
L D S LK+ FG SK +V +P + T Y+APEV +EYD KV DV+S
Sbjct: 147 LLDGSPAPRLKICAFGYSK-SSVLHSQPKSTVGTPA-YIAPEVLLKKEYDGKVADVWSCG 204
Query: 353 LILQEMIEGCPPFTMKHDNEVPKAY 377
+ L M+ G PF D E PK +
Sbjct: 205 VTLYVMLVGAYPF---EDPEEPKNF 226
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+ +L++IRHPN++ + ++++ E + G+L FL K +L A +F I
Sbjct: 79 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 138
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
G++YLH + I H DL+P ++ + D+N+ + +K+ DFG++ ++
Sbjct: 139 LDGVHYLHSKR---IAHFDLKPENIMLL----DKNV---PNPRIKLIDFGIAH--KIEAG 186
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 365
+ +VAPE+ E + D++S +I ++ G PF
Sbjct: 187 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 15/194 (7%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRD---ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY 231
G+Q A K + + R + D E+++L++I+HPNV+ + ++++ E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGEL 95
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
+ G+L FL K +L A F I G+ YLH + I H DL+P ++ +
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLL---- 148
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 351
DRN+ + +K+ DFG++ + + + +VAPE+ E + D++S
Sbjct: 149 DRNVPKP---RIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSI 203
Query: 352 ALILQEMIEGCPPF 365
+I ++ G PF
Sbjct: 204 GVITYILLSGASPF 217
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 26/195 (13%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVTEY 231
+VAVKKL S R +R EL LL+ ++H NV+ L T ++ + + +
Sbjct: 55 KVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT 113
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
L DL +K + AL + RG+ Y+H IIHRDL+PS
Sbjct: 114 LMGADLNNIVKCQ-ALSDEHVQFLVYQLLRGLKYIHS---AGIIHRDLKPS--------- 160
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFS 350
N+ ++ L++ DFG+++ + D +T + Y APE+ N Y+ VD++S
Sbjct: 161 --NVAVNEDSELRILDFGLAR----QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 214
Query: 351 FALILQEMIEGCPPF 365
I+ E+++G F
Sbjct: 215 VGCIMAELLQGKALF 229
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 23/173 (13%)
Query: 200 ELALLQKIR-HPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALD 258
E+ +L+K+ HPN++Q ++ +V + + KG+L +L K L +
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132
Query: 259 IARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKE 318
+ + LH+ + I+HRDL+P NIL DD N+K+ DFG S L E
Sbjct: 133 LLEVICALHK---LNIVHRDLKP-----------ENILLDDDMNIKLTDFGFSCQLDPGE 178
Query: 319 DRPLTCQDTSCRYVAPEVFK------NEEYDTKVDVFSFALILQEMIEGCPPF 365
C S Y+APE+ + + Y +VD++S +I+ ++ G PPF
Sbjct: 179 KLRSVCGTPS--YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 15/194 (7%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRD---ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY 231
G+Q A K + + R + D E+++L++I+HPNV+ + ++++ E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
+ G+L FL K +L A F I G+ YLH + I H DL+P ++ +
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLL---- 148
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 351
DRN+ + +K+ DFG++ + + + +VAPE+ E + D++S
Sbjct: 149 DRNVPKP---RIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSI 203
Query: 352 ALILQEMIEGCPPF 365
+I ++ G PF
Sbjct: 204 GVITYILLSGASPF 217
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 15/194 (7%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRD---ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY 231
G+Q A K + + R + D E+++L++I+HPNV+ + ++++ E
Sbjct: 35 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 94
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
+ G+L FL K +L A F I G+ YLH + I H DL+P ++ +
Sbjct: 95 VAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLL---- 147
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 351
DRN+ + +K+ DFG++ + + + +VAPE+ E + D++S
Sbjct: 148 DRNVPKP---RIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSI 202
Query: 352 ALILQEMIEGCPPF 365
+I ++ G PF
Sbjct: 203 GVITYILLSGASPF 216
>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein
Length = 166
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 62/105 (59%), Gaps = 5/105 (4%)
Query: 26 AELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGF 85
A++N D+DG P L A+ +E ++ LL +G DVN D+ T LH+AA G
Sbjct: 38 ADVNATDNDG--YTP---LHLAASNGHLEIVEVLLKNGADVNASDLTGITPLHLAAATGH 92
Query: 86 TEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
E+V +LL+ GADV+ D G TPL A Y + E++++L KHGA
Sbjct: 93 LEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGA 137
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%)
Query: 56 IKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIY 115
++ L+ +G DVN D D T LH+AA G E+V +LL+ GADV+ D G TPL A
Sbjct: 30 VRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTGITPLHLAAA 89
Query: 116 YKNHEVIKLLEKHGA 130
+ E++++L KHGA
Sbjct: 90 TGHLEIVEVLLKHGA 104
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 29 NGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEV 88
NG D + ++ L A +E ++ LL G DVN D D T LH+AA G E+
Sbjct: 69 NGADVNASDLTGITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEI 128
Query: 89 VSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLE 126
V +LL+ GADV+ +D++G T +I N ++ ++L+
Sbjct: 129 VEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 15/194 (7%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRD---ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY 231
G+Q A K + + R + D E+++L++I+HPNV+ + ++++ E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
+ G+L FL K +L A F I G+ YLH + I H DL+P ++ +
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLL---- 148
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 351
DRN+ + +K+ DFG++ + + + +VAPE+ E + D++S
Sbjct: 149 DRNVPKP---RIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSI 203
Query: 352 ALILQEMIEGCPPF 365
+I ++ G PF
Sbjct: 204 GVITYILLSGASPF 217
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 15/194 (7%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRD---ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY 231
G+Q A K + + R + D E+++L++I+HPNV+ + ++++ E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
+ G+L FL K +L A F I G+ YLH + I H DL+P ++ +
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLL---- 148
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 351
DRN+ + +K+ DFG++ + + + +VAPE+ E + D++S
Sbjct: 149 DRNVPKP---RIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSI 203
Query: 352 ALILQEMIEGCPPF 365
+I ++ G PF
Sbjct: 204 GVITYILLSGASPF 217
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 15/194 (7%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRD---ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY 231
G+Q A K + + R + D E+++L++I+HPNV+ + ++++ E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
+ G+L FL K +L A F I G+ YLH + I H DL+P ++ +
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLL---- 148
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 351
DRN+ + +K+ DFG++ + + + +VAPE+ E + D++S
Sbjct: 149 DRNVPKP---RIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSI 203
Query: 352 ALILQEMIEGCPPF 365
+I ++ G PF
Sbjct: 204 GVITYILLSGASPF 217
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 15/194 (7%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRD---ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY 231
G+Q A K + + R + D E+++L++I+HPNV+ + ++++ E
Sbjct: 35 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 94
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
+ G+L FL K +L A F I G+ YLH + I H DL+P ++ +
Sbjct: 95 VAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLL---- 147
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 351
DRN+ + +K+ DFG++ + + + +VAPE+ E + D++S
Sbjct: 148 DRNVPKP---RIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSI 202
Query: 352 ALILQEMIEGCPPF 365
+I ++ G PF
Sbjct: 203 GVITYILLSGASPF 216
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 23/173 (13%)
Query: 200 ELALLQKIR-HPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALD 258
E+ +L+K+ HPN++Q ++ +V + + KG+L +L K L +
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132
Query: 259 IARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKE 318
+ + LH+ + I+HRDL+P NIL DD N+K+ DFG S L E
Sbjct: 133 LLEVICALHK---LNIVHRDLKP-----------ENILLDDDMNIKLTDFGFSCQLDPGE 178
Query: 319 DRPLTCQDTSCRYVAPEVFK------NEEYDTKVDVFSFALILQEMIEGCPPF 365
C S Y+APE+ + + Y +VD++S +I+ ++ G PPF
Sbjct: 179 KLREVCGTPS--YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 166 GTFILAFWRGIQV--AVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS 223
G +A +G ++ A KK+ + + D DR F+ E+ +++ + HPN+++ ++
Sbjct: 23 GEVKIAVQKGTRIRRAAKKIPKYFVEDVDR---FKQEIEIMKSLDHPNIIRLYETFEDNT 79
Query: 224 PMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSD 283
+ +V E G+L + K + S A R D+ + Y H+ + + HRDL+P +
Sbjct: 80 DIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPEN 136
Query: 284 LYVAYWQNDRNILRDDSGN--LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEE 341
+ DS + LK+ DFG++ K + + + + YV+P+V +
Sbjct: 137 F----------LFLTDSPDSPLKLIDFGLAARF--KPGKMMRTKVGTPYYVSPQVLEG-L 183
Query: 342 YDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 373
Y + D +S +++ ++ G PPF+ D EV
Sbjct: 184 YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEV 215
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 129/313 (41%), Gaps = 80/313 (25%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQ-SSPMMIVTEYLPKG 235
VAVK L E + R A EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 53 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 110
Query: 236 DLRAFLK-RKGALKP--STAVRF----------ALDIARGMNY-----------LHENKP 271
+L +L+ ++ P + RF +D+ R ++ E K
Sbjct: 111 NLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS 170
Query: 272 VPIIHRDLEPSDLYVAYWQND----------------------------RNILRDDSGNL 303
+ + + P DLY + + RNIL + +
Sbjct: 171 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVV 230
Query: 304 KVADFGVSKLLTVKEDR--------PLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 355
K+ DFG+++ + D PL +++APE + Y + DV+SF ++L
Sbjct: 231 KICDFGLARDIYKDPDYVRKGDARLPL-------KWMAPETIFDRVYTIQSDVWSFGVLL 283
Query: 356 QEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKR 411
E+ G P+ +K D E + R R P ++Y L +CW+ +P++R
Sbjct: 284 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML-----DCWHGEPSQR 338
Query: 412 PTFRQIITRLESI 424
PTF +++ L ++
Sbjct: 339 PTFSELVEHLGNL 351
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 23/173 (13%)
Query: 200 ELALLQKIR-HPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALD 258
E+ +L+K+ HPN++Q ++ +V + + KG+L +L K L +
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 119
Query: 259 IARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKE 318
+ + LH+ + I+HRDL+P NIL DD N+K+ DFG S L E
Sbjct: 120 LLEVICALHK---LNIVHRDLKP-----------ENILLDDDMNIKLTDFGFSCQLDPGE 165
Query: 319 DRPLTCQDTSCRYVAPEVFK------NEEYDTKVDVFSFALILQEMIEGCPPF 365
C S Y+APE+ + + Y +VD++S +I+ ++ G PPF
Sbjct: 166 KLREVCGTPS--YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 158
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ D+G+++ D +T + Y APE+ N Y+ VD+
Sbjct: 159 --------NEDCELKILDYGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 206
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 207 WSVGCIMAELLTG 219
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 166 GTFILAFWRGIQV--AVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS 223
G +A +G ++ A KK+ + + D DR F+ E+ +++ + HPN+++ ++
Sbjct: 40 GEVKIAVQKGTRIRRAAKKIPKYFVEDVDR---FKQEIEIMKSLDHPNIIRLYETFEDNT 96
Query: 224 PMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSD 283
+ +V E G+L + K + S A R D+ + Y H+ + + HRDL+P +
Sbjct: 97 DIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPEN 153
Query: 284 LYVAYWQNDRNILRDDSGN--LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEE 341
+ DS + LK+ DFG++ K + + + + YV+P+V +
Sbjct: 154 F----------LFLTDSPDSPLKLIDFGLAARF--KPGKMMRTKVGTPYYVSPQVLEG-L 200
Query: 342 YDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 373
Y + D +S +++ ++ G PPF+ D EV
Sbjct: 201 YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEV 232
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 15/194 (7%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRD---ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY 231
G+Q A K + + R + D E+++L++I+HPNV+ + ++++ E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
+ G+L FL K +L A F I G+ YLH + I H DL+P ++ +
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLL---- 148
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 351
DRN+ + +K+ DFG++ + + + +VAPE+ E + D++S
Sbjct: 149 DRNVPKP---RIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSI 203
Query: 352 ALILQEMIEGCPPF 365
+I ++ G PF
Sbjct: 204 GVITYILLSGASPF 217
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 128/313 (40%), Gaps = 80/313 (25%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQ-SSPMMIVTEYLPKG 235
VAVK L E + R A EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 55 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 112
Query: 236 DLRAFLKRK-GALKP--STAVRF----------ALDIARGMNY-----------LHENKP 271
+L +L+ K P + RF +D+ R ++ E K
Sbjct: 113 NLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS 172
Query: 272 VPIIHRDLEPSDLYVAYWQND----------------------------RNILRDDSGNL 303
+ + + P DLY + + RNIL + +
Sbjct: 173 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVV 232
Query: 304 KVADFGVSKLLTVKEDR--------PLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 355
K+ DFG+++ + D PL +++APE + Y + DV+SF ++L
Sbjct: 233 KICDFGLARDIYKDPDYVRKGDARLPL-------KWMAPETIFDRVYTIQSDVWSFGVLL 285
Query: 356 QEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKR 411
E+ G P+ +K D E + R R P ++Y L +CW+ +P++R
Sbjct: 286 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML-----DCWHGEPSQR 340
Query: 412 PTFRQIITRLESI 424
PTF +++ L ++
Sbjct: 341 PTFSELVEHLGNL 353
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 93/194 (47%), Gaps = 28/194 (14%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G +VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 101
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFAL-DIARGMNYLHENKPVPIIHRDLEPSDLYVAY 288
+L DL +K A V+F + I RG+ Y+H IIHRDL+PS+L V
Sbjct: 102 THLMGADLNNIVK--CAKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV-- 154
Query: 289 WQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVD 347
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD
Sbjct: 155 ---------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 201
Query: 348 VFSFALILQEMIEG 361
++S I+ E++ G
Sbjct: 202 IWSVGCIMAELLTG 215
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 89/201 (44%), Gaps = 34/201 (16%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
GI VAVKKL + RA+R EL LL+ + H N++ L T P + E+
Sbjct: 49 GINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLLNVFT---PQKTLEEF--- 101
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSDL 284
D+ ++ A + LD R G+ +LH IIHRDL+PS
Sbjct: 102 QDVYLVMELMDA-NLCQVIHMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPS-- 155
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
NI+ LK+ DFG+++ T + +T + Y APEV Y
Sbjct: 156 ---------NIVVKSDCTLKILDFGLAR--TACTNFMMTPYVVTRYYRAPEVILGMGYAA 204
Query: 345 KVDVFSFALILQEMIEGCPPF 365
VD++S I+ E+++GC F
Sbjct: 205 NVDIWSVGCIMGELVKGCVIF 225
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 15/194 (7%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRD---ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY 231
G+Q A K + + R + D E+++L++I+HPNV+ + ++++ E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
+ G+L FL K +L A F I G+ YLH + I H DL+P ++ +
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLL---- 148
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 351
DRN+ + +K+ DFG++ + + + +VAPE+ E + D++S
Sbjct: 149 DRNVPKP---RIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSI 203
Query: 352 ALILQEMIEGCPPF 365
+I ++ G PF
Sbjct: 204 GVITYILLSGASPF 217
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 128/313 (40%), Gaps = 80/313 (25%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQ-SSPMMIVTEYLPKG 235
VAVK L E + R A EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 62 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 236 DLRAFLKRK-GALKP--STAVRF----------ALDIARGMNY-----------LHENKP 271
+L +L+ K P + RF +D+ R ++ E K
Sbjct: 120 NLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS 179
Query: 272 VPIIHRDLEPSDLYVAYWQND----------------------------RNILRDDSGNL 303
+ + + P DLY + + RNIL + +
Sbjct: 180 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVV 239
Query: 304 KVADFGVSKLLTVKEDR--------PLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 355
K+ DFG+++ + D PL +++APE + Y + DV+SF ++L
Sbjct: 240 KICDFGLARDIYKDPDYVRKGDARLPL-------KWMAPETIFDRVYTIQSDVWSFGVLL 292
Query: 356 QEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKR 411
E+ G P+ +K D E + R R P ++Y L +CW+ +P++R
Sbjct: 293 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML-----DCWHGEPSQR 347
Query: 412 PTFRQIITRLESI 424
PTF +++ L ++
Sbjct: 348 PTFSELVEHLGNL 360
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 15/194 (7%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRD---ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY 231
G+Q A K + + R + D E+++L++I+HPNV+ + ++++ E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
+ G+L FL K +L A F I G+ YLH + I H DL+P ++ +
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLL---- 148
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 351
DRN+ + +K+ DFG++ + + + +VAPE+ E + D++S
Sbjct: 149 DRNVPKP---RIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSI 203
Query: 352 ALILQEMIEGCPPF 365
+I ++ G PF
Sbjct: 204 GVITYILLSGASPF 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 15/194 (7%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRD---ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY 231
G+Q A K + + R + D E+++L++I+HPNV+ + ++++ E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
+ G+L FL K +L A F I G+ YLH + I H DL+P ++ +
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLL---- 148
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 351
DRN+ + +K+ DFG++ + + + +VAPE+ E + D++S
Sbjct: 149 DRNVPKP---RIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSI 203
Query: 352 ALILQEMIEGCPPF 365
+I ++ G PF
Sbjct: 204 GVITYILLSGASPF 217
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G +VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 53 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 111
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 112 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 164
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 165 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 212
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 213 WSVGCIMAELLTG 225
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 109/259 (42%), Gaps = 49/259 (18%)
Query: 176 IQVAVKK------LGEEVISDDDRVRAFRDELALLQKIR----HPNVVQFLGAV-TQSSP 224
+QVA+K LG +SD E+ALL K+ HP V++ L TQ
Sbjct: 57 LQVAIKVIPRNRVLGWSPLSDSVTCPL---EVALLWKVGAGGGHPGVIRLLDWFETQEGF 113
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDL 284
M+++ LP DL ++ KG L + F + + + H ++HRD++
Sbjct: 114 MLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIK---- 166
Query: 285 YVAYWQNDRNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYD 343
D NIL D G K+ DFG LL D P T D + Y PE +Y
Sbjct: 167 -------DENILIDLRRGCAKLIDFGSGALL---HDEPYTDFDGTRVYSPPEWISRHQYH 216
Query: 344 T-KVDVFSFALILQEMIEGCPPFTMKHDNEVPKA---YAARQRPPFKAPAKLYARGLKEL 399
V+S ++L +M+ G PF + D E+ +A + A P A L
Sbjct: 217 ALPATVWSLGILLYDMVCGDIPF--ERDQEILEAELHFPAHVSPDCCA-----------L 263
Query: 400 IEECWNEKPAKRPTFRQII 418
I C KP+ RP+ +I+
Sbjct: 264 IRRCLAPKPSSRPSLEEIL 282
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 129/313 (41%), Gaps = 80/313 (25%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQ-SSPMMIVTEYLPKG 235
VAVK L E + R A EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 60 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 236 DLRAFLK-RKGALKP--STAVRF----------ALDIARGMNY-----------LHENKP 271
+L +L+ ++ P + RF +D+ R ++ E K
Sbjct: 118 NLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS 177
Query: 272 VPIIHRDLEPSDLYVAYWQND----------------------------RNILRDDSGNL 303
+ + + P DLY + + RNIL + +
Sbjct: 178 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVV 237
Query: 304 KVADFGVSKLLTVKEDR--------PLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 355
K+ DFG+++ + D PL +++APE + Y + DV+SF ++L
Sbjct: 238 KICDFGLARDIYKDPDYVRKGDARLPL-------KWMAPETIFDRVYTIQSDVWSFGVLL 290
Query: 356 QEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKR 411
E+ G P+ +K D E + R R P ++Y L +CW+ +P++R
Sbjct: 291 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML-----DCWHGEPSQR 345
Query: 412 PTFRQIITRLESI 424
PTF +++ L ++
Sbjct: 346 PTFSELVEHLGNL 358
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 15/194 (7%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRD---ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY 231
G+Q A K + + R + D E+++L++I+HPNV+ + ++++ E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
+ G+L FL K +L A F I G+ YLH + I H DL+P ++ +
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLL---- 148
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 351
DRN+ + +K+ DFG++ + + + +VAPE+ E + D++S
Sbjct: 149 DRNVPKP---RIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSI 203
Query: 352 ALILQEMIEGCPPF 365
+I ++ G PF
Sbjct: 204 GVITYILLSGASPF 217
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 15/194 (7%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRD---ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY 231
G+Q A K + + R + D E+++L++I+HPNV+ + ++++ E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
+ G+L FL K +L A F I G+ YLH + I H DL+P ++ +
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLL---- 148
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 351
DRN+ + +K+ DFG++ + + + +VAPE+ E + D++S
Sbjct: 149 DRNVPKP---RIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSI 203
Query: 352 ALILQEMIEGCPPF 365
+I ++ G PF
Sbjct: 204 GVITYILLSGASPF 217
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 26/195 (13%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVTEY 231
+VAVKKL S R +R EL LL+ ++H NV+ L T ++ + + +
Sbjct: 47 KVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT 105
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
L DL +K + AL + RG+ Y+H IIHRDL+PS
Sbjct: 106 LMGADLNNIVKCQ-ALSDEHVQFLVYQLLRGLKYIHS---AGIIHRDLKPS--------- 152
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFS 350
N+ ++ L++ DFG+++ + D +T + Y APE+ N Y+ VD++S
Sbjct: 153 --NVAVNEDCELRILDFGLAR----QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 206
Query: 351 FALILQEMIEGCPPF 365
I+ E+++G F
Sbjct: 207 VGCIMAELLQGKALF 221
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G +VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 158
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 159 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 206
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 207 WSVGCIMAELLTG 219
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G +VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 57 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 115
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 116 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 168
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 169 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 216
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 217 WSVGCIMAELLTG 229
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 119/266 (44%), Gaps = 51/266 (19%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSP----MMIVTEYLPKGDLRAFLKRKGALKPSTAVRF 255
E+ L ++H N++QF+GA + + + ++T + KG L FLK + +
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN-VVSWNELCHI 126
Query: 256 ALDIARGMNYLHENKPV-------PIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADF 308
A +ARG+ YLHE+ P I HRD++ +N+L ++ +ADF
Sbjct: 127 AETMARGLAYLHEDIPGLKDGHKPAISHRDIK-----------SKNVLLKNNLTACIADF 175
Query: 309 GVS-KLLTVKEDRPLTCQDTSCRYVAPEVFK---NEEYDT--KVDVFSFALILQEMIEGC 362
G++ K K Q + RY+APEV + N + D ++D+++ L+L E+ C
Sbjct: 176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRC 235
Query: 363 PP-------FTMKHDNEVPK----------AYAARQRPPFKAPAKLYA--RGLKELIEEC 403
+ + + E+ + ++RP + + +A L E IEEC
Sbjct: 236 TAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEEC 295
Query: 404 WNEKPAKRPTFRQI---ITRLESINN 426
W+ R + + IT+++ + N
Sbjct: 296 WDHDAEARLSAGCVGERITQMQRLTN 321
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G +VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 67 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 125
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 126 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 178
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 179 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 226
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 227 WSVGCIMAELLTG 239
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G +VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 101
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 102 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 154
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 155 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 202
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 203 WSVGCIMAELLTG 215
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 107/239 (44%), Gaps = 34/239 (14%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY--- 231
G +VA+KKL S+ RA+R EL LL+ +RH NV+ L T + T++
Sbjct: 50 GAKVAIKKLYRPFQSELFAKRAYR-ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLV 108
Query: 232 LP--KGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+P DL +K + L + +G+ Y+H IIHRDL+P +L V
Sbjct: 109 MPFMGTDLGKLMKHE-KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAV--- 161
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ + D + + Y APEV N Y VD+
Sbjct: 162 --------NEDCELKILDFGLAR----QADSEMXGXVVTRWYRAPEVILNWMRYTQTVDI 209
Query: 349 FSFALILQEMIEGCPPFTMK-HDNEVPKAYAARQRPPFKA-------PAKLYARGLKEL 399
+S I+ EMI G F H +++ + PP + AK Y +GL EL
Sbjct: 210 WSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPEL 268
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G +VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 66 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 124
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 125 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 177
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 178 --------NEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 225
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 226 WSVGCIMAELLTG 238
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 96/205 (46%), Gaps = 30/205 (14%)
Query: 178 VAVKKL--GEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
VAVK + GE++ D+ V+ E+ + +RHPN+V+F + + + IV EY G
Sbjct: 47 VAVKYIERGEKI---DENVKR---EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGG 100
Query: 236 DLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNI 295
+L + G A F + G++Y H + + HRDL+ N
Sbjct: 101 ELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ---VCHRDLKL-----------ENT 146
Query: 296 LRDDS--GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKV-DVFSFA 352
L D S LK+ FG SK +V +P T Y+APEV +EYD KV DV+S
Sbjct: 147 LLDGSPAPRLKICAFGYSK-SSVLHSQPKDTVGTPA-YIAPEVLLKKEYDGKVADVWSCG 204
Query: 353 LILQEMIEGCPPFTMKHDNEVPKAY 377
+ L M+ G PF D E PK +
Sbjct: 205 VTLYVMLVGAYPF---EDPEEPKNF 226
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 70 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 128
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 129 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 181
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D + + Y APE+ N Y+ VD+
Sbjct: 182 --------NEDCELKILDFGLAR----HTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDI 229
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 230 WSVGCIMAELLTG 242
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 15/194 (7%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRD---ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY 231
G+Q A K + + R + D E+++L++I+HPNV+ + ++++ E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
+ G+L FL K +L A F I G+ YLH + I H DL+P ++ +
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLL---- 148
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 351
DRN+ + +K+ DFG++ + + + +VAPE+ E + D++S
Sbjct: 149 DRNVPKP---RIKIIDFGLAHKIDFGNE--FKNIFGTPAFVAPEIVNYEPLGLEADMWSI 203
Query: 352 ALILQEMIEGCPPF 365
+I ++ G PF
Sbjct: 204 GVITYILLSGASPF 217
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 112
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 113 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 165
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ T E +T + Y APE+ N Y+ VD+
Sbjct: 166 --------NEDCELKILDFGLAR-HTADE---MTGYVATRWYRAPEIMLNWMHYNQTVDI 213
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 214 WSVGCIMAELLTG 226
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 112
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 113 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 165
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ T E +T + Y APE+ N Y+ VD+
Sbjct: 166 --------NEDCELKILDFGLAR-HTADE---MTGYVATRWYRAPEIMLNWMHYNQTVDI 213
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 214 WSVGCIMAELLTG 226
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 143/326 (43%), Gaps = 53/326 (16%)
Query: 111 GDAIYYKNHEVIKLLEKHGAKPLMAPMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFI 169
G+ +Y++ + K+ A AP + HA ++ P E +P E + + G F
Sbjct: 8 GENLYFQGSLLSKI--NSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG 65
Query: 170 LAFWRGIQV------AVKKLGEEVISD------DDRVRAFRDELALLQKIRH--PNVVQF 215
+ + GI+V A+K + ++ ISD RV E+ LL+K+ V++
Sbjct: 66 -SVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRL 121
Query: 216 LGAVTQSSPMMIVTEYL-PKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPI 274
L + +++ E P DL F+ +GAL+ A F + + + H +
Sbjct: 122 LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CGV 178
Query: 275 IHRDLEPSDLYVAYWQNDRNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVA 333
+HRD++ D NIL D + G LK+ DFG LL +D T D + Y
Sbjct: 179 LHRDIK-----------DENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSP 224
Query: 334 PEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAA-RQRPPFKAPAKL 391
PE + Y + V+S ++L +M+ G PF +HD E+ + RQR
Sbjct: 225 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQR--------- 273
Query: 392 YARGLKELIEECWNEKPAKRPTFRQI 417
+ + LI C +P+ RPTF +I
Sbjct: 274 VSSECQHLIRWCLALRPSDRPTFEEI 299
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 95/194 (48%), Gaps = 28/194 (14%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 112
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFAL-DIARGMNYLHENKPVPIIHRDLEPSDLYVAY 288
+L DL +K + V+F + I RG+ Y+H IIHRDL+PS+L V
Sbjct: 113 THLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV-- 165
Query: 289 WQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVD 347
++ LK+ DFG+++ T E +T + Y APE+ N Y+ VD
Sbjct: 166 ---------NEDCELKILDFGLAR-HTADE---MTGYVATRWYRAPEIMLNWMHYNQTVD 212
Query: 348 VFSFALILQEMIEG 361
++S I+ E++ G
Sbjct: 213 IWSVGCIMAELLTG 226
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 34/224 (15%)
Query: 200 ELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLRAFLKRKGALKPSTAVRFA 256
E+ LL+K+ V++ L + +++ E + P DL F+ +GAL+ A F
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFF 120
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRD-DSGNLKVADFGVSKLLT 315
+ + + H ++HRD++ D NIL D + G LK+ DFG LL
Sbjct: 121 WQVLEAVRHCHN---CGVLHRDIK-----------DENILIDLNRGELKLIDFGSGALL- 165
Query: 316 VKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTMKHDNEVP 374
+D T D + Y PE + Y + V+S ++L +M+ G PF +HD E+
Sbjct: 166 --KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 221
Query: 375 KAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 417
+ RQR + + LI C +P+ RPTF +I
Sbjct: 222 RGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 158
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ FG+++ D +T + Y APE+ N Y+ VD+
Sbjct: 159 --------NEDCELKILGFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 206
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 207 WSVGCIMAELLTG 219
>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEH|B Chain B, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEH|C Chain C, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module
Length = 157
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 68/120 (56%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRD 70
LL+ + D E + NG D + ++ L A E +E ++ LL +G DVN +D
Sbjct: 6 LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKD 65
Query: 71 IDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
D T LH+AA +G E+V +LL+ GADV+ KD+ G TPL A + E++++L K GA
Sbjct: 66 KDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGA 125
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 62/102 (60%), Gaps = 5/102 (4%)
Query: 26 AELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGF 85
A++N D DG P L A E +E ++ LL +G DVN +D D T LH+AA +G
Sbjct: 59 ADVNAKDKDG--YTP---LHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGH 113
Query: 86 TEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEK 127
E+V +LL+ GADV+ +D++G TP AI + ++ ++L+K
Sbjct: 114 LEIVEVLLKAGADVNAQDKFGKTPFDLAIREGHEDIAEVLQK 155
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 58/95 (61%), Gaps = 7/95 (7%)
Query: 56 IKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIY 115
++ L+ +G DVN +D D T LH+AA +G E+V +LL+ GADV+ KD+ G TPL A
Sbjct: 18 VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAR 77
Query: 116 YKNHEVIKLLEKHGA------KPLMAPMHVKHARE 144
+ E++++L K GA K P+H+ ARE
Sbjct: 78 EGHLEIVEVLLKAGADVNAKDKDGYTPLHLA-ARE 111
>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4
pdb|2XZD|H Chain H, Caspase-3 In Complex With An Inhibitory Darpin-3.4
Length = 136
Score = 66.2 bits (160), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 26 AELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGF 85
A++N +DD G + P L A +E ++ LL G DVN DI RT LH+AA G
Sbjct: 38 ADVNAMDDAG--VTP---LHLAAKRGHLEIVEVLLKHGADVNASDIWGRTPLHLAATVGH 92
Query: 86 TEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEK 127
E+V +LLE GADV+ +D++G T +I N ++ ++L+K
Sbjct: 93 LEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 59.7 bits (143), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 48/75 (64%)
Query: 56 IKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIY 115
++ L+ +G DVN D T LH+AA +G E+V +LL+ GADV+ D WG TPL A
Sbjct: 30 VRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWGRTPLHLAAT 89
Query: 116 YKNHEVIKLLEKHGA 130
+ E++++L ++GA
Sbjct: 90 VGHLEIVEVLLEYGA 104
Score = 34.7 bits (78), Expect = 0.12, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 84 GFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
G + V +L+ GADV+ D G TPL A + E++++L KHGA
Sbjct: 25 GQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGA 71
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 27/176 (15%)
Query: 200 ELALLQKIR---HPNVVQFLGAVTQSSP-----MMIVTEYLPKGDLRAFLKRKG--ALKP 249
E+ALL+++ HPNVV+ + S + +V E++ + DLR +L + L
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 111
Query: 250 STAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFG 309
T RG+++LH N I+HRDL+P NIL G +K+ADFG
Sbjct: 112 ETIKDLMRQFLRGLDFLHANC---IVHRDLKPE-----------NILVTSGGTVKLADFG 157
Query: 310 VSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 365
++++ + + L + Y APEV Y T VD++S I EM P F
Sbjct: 158 LARIYSYQ--MALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 211
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 133/302 (44%), Gaps = 51/302 (16%)
Query: 135 APMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEEV 187
AP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 15 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDR 73
Query: 188 ISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLR 238
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 74 ISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 130
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRD 298
F+ +GAL+ A F + + + H ++HRD++ D NIL D
Sbjct: 131 DFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIK-----------DENILID 176
Query: 299 -DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 356
+ G LK+ DFG LL +D T D + Y PE + Y + V+S ++L
Sbjct: 177 LNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLY 233
Query: 357 EMIEGCPPFTMKHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 415
+M+ G PF +HD E+ + RQR + + LI C +P+ RPTF
Sbjct: 234 DMVCGDIPF--EHDEEIIRGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFE 282
Query: 416 QI 417
+I
Sbjct: 283 EI 284
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 18/177 (10%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+ +L+K+ HP +++ + + IV E + G+L + LK +T + +
Sbjct: 65 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+ YLHEN IIHRDL+P ++ ++ + D I K+ DFG SK+L
Sbjct: 124 LLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLI--------KITDFGHSKILGETSL 172
Query: 320 RPLTCQDTSCRYVAPEVF---KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 373
C + Y+APEV Y+ VD +S +IL + G PPF+ +H +V
Sbjct: 173 MRTLCGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS-EHRTQV 226
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 18/177 (10%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+ +L+K+ HP +++ + + IV E + G+L + LK +T + +
Sbjct: 65 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+ YLHEN IIHRDL+P ++ ++ + D I K+ DFG SK+L
Sbjct: 124 LLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLI--------KITDFGHSKILGETSL 172
Query: 320 RPLTCQDTSCRYVAPEVF---KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 373
C + Y+APEV Y+ VD +S +IL + G PPF+ +H +V
Sbjct: 173 MRTLCGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS-EHRTQV 226
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 18/177 (10%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+ +L+K+ HP +++ + + IV E + G+L + LK +T + +
Sbjct: 65 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+ YLHEN IIHRDL+P ++ ++ + D I K+ DFG SK+L
Sbjct: 124 LLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLI--------KITDFGHSKILGETSL 172
Query: 320 RPLTCQDTSCRYVAPEVF---KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 373
C + Y+APEV Y+ VD +S +IL + G PPF+ +H +V
Sbjct: 173 MRTLCGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS-EHRTQV 226
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 18/177 (10%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+ +L+K+ HP +++ + + IV E + G+L + LK +T + +
Sbjct: 71 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 129
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+ YLHEN IIHRDL+P ++ ++ + D I K+ DFG SK+L
Sbjct: 130 LLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLI--------KITDFGHSKILGETSL 178
Query: 320 RPLTCQDTSCRYVAPEVF---KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 373
C + Y+APEV Y+ VD +S +IL + G PPF+ +H +V
Sbjct: 179 MRTLCGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS-EHRTQV 232
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 18/177 (10%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+ +L+K+ HP +++ + + IV E + G+L + LK +T + +
Sbjct: 64 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 122
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+ YLHEN IIHRDL+P ++ ++ + D I K+ DFG SK+L
Sbjct: 123 LLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLI--------KITDFGHSKILGETSL 171
Query: 320 RPLTCQDTSCRYVAPEVF---KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 373
C + Y+APEV Y+ VD +S +IL + G PPF+ +H +V
Sbjct: 172 MRTLCGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS-EHRTQV 225
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 18/177 (10%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+ +L+K+ HP +++ + + IV E + G+L + LK +T + +
Sbjct: 190 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 248
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+ YLHEN IIHRDL+P ++ ++ + D I K+ DFG SK+L
Sbjct: 249 LLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLI--------KITDFGHSKILGETSL 297
Query: 320 RPLTCQDTSCRYVAPEVF---KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 373
C + Y+APEV Y+ VD +S +IL + G PPF+ +H +V
Sbjct: 298 MRTLCGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS-EHRTQV 351
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 18/177 (10%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+ +L+K+ HP +++ + + IV E + G+L + LK +T + +
Sbjct: 204 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 262
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+ YLHEN IIHRDL+P ++ ++ + D I K+ DFG SK+L
Sbjct: 263 LLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLI--------KITDFGHSKILGETSL 311
Query: 320 RPLTCQDTSCRYVAPEVF---KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 373
C + Y+APEV Y+ VD +S +IL + G PPF+ +H +V
Sbjct: 312 MRTLCGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS-EHRTQV 365
>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEE|B Chain B, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEE|C Chain C, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEE|D Chain D, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module
Length = 157
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 68/120 (56%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRD 70
LL+ + D E + NG D + ++ L A E +E ++ LL +G DVN +D
Sbjct: 6 LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKD 65
Query: 71 IDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
D T LH+AA +G E+V +LL+ GADV+ KD+ G TPL A + E++++L K GA
Sbjct: 66 KDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGA 125
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 5/102 (4%)
Query: 26 AELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGF 85
A++N D DG P L A E +E ++ LL +G DVN +D D T LH+AA +G
Sbjct: 59 ADVNAKDKDG--YTP---LHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGH 113
Query: 86 TEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEK 127
E+V +LL+ GADV+ +D++G TP AI N ++ ++L+K
Sbjct: 114 LEIVEVLLKAGADVNAQDKFGKTPFDLAIDNGNEDIAEVLQK 155
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 58/95 (61%), Gaps = 7/95 (7%)
Query: 56 IKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIY 115
++ L+ +G DVN +D D T LH+AA +G E+V +LL+ GADV+ KD+ G TPL A
Sbjct: 18 VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAR 77
Query: 116 YKNHEVIKLLEKHGA------KPLMAPMHVKHARE 144
+ E++++L K GA K P+H+ ARE
Sbjct: 78 EGHLEIVEVLLKAGADVNAKDKDGYTPLHLA-ARE 111
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 133/302 (44%), Gaps = 51/302 (16%)
Query: 135 APMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEEV 187
AP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 35 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDR 93
Query: 188 ISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLR 238
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 94 ISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 150
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRD 298
F+ +GAL+ A F + + + H ++HRD++ D NIL D
Sbjct: 151 DFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIK-----------DENILID 196
Query: 299 -DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 356
+ G LK+ DFG LL +D T D + Y PE + Y + V+S ++L
Sbjct: 197 LNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLY 253
Query: 357 EMIEGCPPFTMKHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 415
+M+ G PF +HD E+ + RQR + + LI C +P+ RPTF
Sbjct: 254 DMVCGDIPF--EHDEEIIRGQVFFRQRVSXEC---------QHLIRWCLALRPSDRPTFE 302
Query: 416 QI 417
+I
Sbjct: 303 EI 304
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 133/302 (44%), Gaps = 51/302 (16%)
Query: 135 APMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEEV 187
AP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 3 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDR 61
Query: 188 ISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLR 238
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 62 ISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 118
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRD 298
F+ +GAL+ A F + + + H ++HRD++ D NIL D
Sbjct: 119 DFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIK-----------DENILID 164
Query: 299 -DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 356
+ G LK+ DFG LL +D T D + Y PE + Y + V+S ++L
Sbjct: 165 LNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLY 221
Query: 357 EMIEGCPPFTMKHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 415
+M+ G PF +HD E+ + RQR + + LI C +P+ RPTF
Sbjct: 222 DMVCGDIPF--EHDEEIIRGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFE 270
Query: 416 QI 417
+I
Sbjct: 271 EI 272
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 133/302 (44%), Gaps = 51/302 (16%)
Query: 135 APMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEEV 187
AP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 2 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDR 60
Query: 188 ISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLR 238
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 61 ISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 117
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRD 298
F+ +GAL+ A F + + + H ++HRD++ D NIL D
Sbjct: 118 DFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIK-----------DENILID 163
Query: 299 -DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 356
+ G LK+ DFG LL +D T D + Y PE + Y + V+S ++L
Sbjct: 164 LNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLY 220
Query: 357 EMIEGCPPFTMKHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 415
+M+ G PF +HD E+ + RQR + + LI C +P+ RPTF
Sbjct: 221 DMVCGDIPF--EHDEEIIRGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFE 269
Query: 416 QI 417
+I
Sbjct: 270 EI 271
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 133/302 (44%), Gaps = 51/302 (16%)
Query: 135 APMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEEV 187
AP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 30 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDR 88
Query: 188 ISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLR 238
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 89 ISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 145
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRD 298
F+ +GAL+ A F + + + H ++HRD++ D NIL D
Sbjct: 146 DFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIK-----------DENILID 191
Query: 299 -DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 356
+ G LK+ DFG LL +D T D + Y PE + Y + V+S ++L
Sbjct: 192 LNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLY 248
Query: 357 EMIEGCPPFTMKHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 415
+M+ G PF +HD E+ + RQR + + LI C +P+ RPTF
Sbjct: 249 DMVCGDIPF--EHDEEIIRGQVFFRQR---------VSXECQHLIRWCLALRPSDRPTFE 297
Query: 416 QI 417
+I
Sbjct: 298 EI 299
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 133/302 (44%), Gaps = 51/302 (16%)
Query: 135 APMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEEV 187
AP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 2 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDR 60
Query: 188 ISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLR 238
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 61 ISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 117
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRD 298
F+ +GAL+ A F + + + H ++HRD++ D NIL D
Sbjct: 118 DFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIK-----------DENILID 163
Query: 299 -DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 356
+ G LK+ DFG LL +D T D + Y PE + Y + V+S ++L
Sbjct: 164 LNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLY 220
Query: 357 EMIEGCPPFTMKHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 415
+M+ G PF +HD E+ + RQR + + LI C +P+ RPTF
Sbjct: 221 DMVCGDIPF--EHDEEIIRGQVFFRQR---------VSXECQHLIRWCLALRPSDRPTFE 269
Query: 416 QI 417
+I
Sbjct: 270 EI 271
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 31/226 (13%)
Query: 157 FTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 102
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + +VT +L DL LK + L F I RG+ Y+
Sbjct: 103 IIGINDIIRAPTIEQMKDVYLVT-HLMGADLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 160
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRP--LTC 324
H ++HRDL+PS N+L + + +LK+ DFG++++ D LT
Sbjct: 161 HSAN---VLHRDLKPS-----------NLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 206
Query: 325 QDTSCRYVAPEVFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 369
+ Y APE+ N + Y +D++S IL EM+ P F KH
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 133/302 (44%), Gaps = 51/302 (16%)
Query: 135 APMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEEV 187
AP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 3 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDR 61
Query: 188 ISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLR 238
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 62 ISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 118
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRD 298
F+ +GAL+ A F + + + H ++HRD++ D NIL D
Sbjct: 119 DFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIK-----------DENILID 164
Query: 299 -DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 356
+ G LK+ DFG LL +D T D + Y PE + Y + V+S ++L
Sbjct: 165 LNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLY 221
Query: 357 EMIEGCPPFTMKHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 415
+M+ G PF +HD E+ + RQR + + LI C +P+ RPTF
Sbjct: 222 DMVCGDIPF--EHDEEIIRGQVFFRQR---------VSXECQHLIRWCLALRPSDRPTFE 270
Query: 416 QI 417
+I
Sbjct: 271 EI 272
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 27/176 (15%)
Query: 200 ELALLQKIR---HPNVVQFLGAVTQSSP-----MMIVTEYLPKGDLRAFLKRKG--ALKP 249
E+ALL+++ HPNVV+ + S + +V E++ + DLR +L + L
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 111
Query: 250 STAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFG 309
T RG+++LH N I+HRDL+P NIL G +K+ADFG
Sbjct: 112 ETIKDLMRQFLRGLDFLHANC---IVHRDLKPE-----------NILVTSGGTVKLADFG 157
Query: 310 VSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 365
++++ + + L + Y APEV Y T VD++S I EM P F
Sbjct: 158 LARIYSYQ--MALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 211
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 135/303 (44%), Gaps = 53/303 (17%)
Query: 162 EITKGTFILAFWRGIQ------VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQF 215
++ KG + + W+ I VAVKK+ + + D R FR+ + L + H N+V
Sbjct: 16 KLGKGAYGIV-WKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNL 74
Query: 216 LGAVTQSS--PMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVP 273
L + + + +V +Y+ + DL A + R L+P + + + YLH
Sbjct: 75 LNVLRADNDRDVYLVFDYM-ETDLHAVI-RANILEPVHKQYVVYQLIKVIKYLHSGG--- 129
Query: 274 IIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKL------------LTVKE--- 318
++HRD++PS NIL + ++KVADFG+S+ L++ E
Sbjct: 130 LLHRDMKPS-----------NILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTE 178
Query: 319 ----DRPLTCQDTSCR-YVAPEV-FKNEEYDTKVDVFSFALILQEMIEGCPPF----TMK 368
D+P+ + R Y APE+ + +Y +D++S IL E++ G P F TM
Sbjct: 179 NFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM- 237
Query: 369 HDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 428
N++ + P + + + K +IE + ++ R I T+ +++ I
Sbjct: 238 --NQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKI 295
Query: 429 NHK 431
N K
Sbjct: 296 NPK 298
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 90/174 (51%), Gaps = 24/174 (13%)
Query: 253 VRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK 312
+ ++ +ARGM +L K IHRDL RNIL ++ +K+ DFG+++
Sbjct: 202 ISYSFQVARGMEFLSSRK---CIHRDLAA-----------RNILLSENNVVKICDFGLAR 247
Query: 313 LLTVKEDRPLTCQDTSC--RYVAPEVFKNEEYDTKVDVFSFALILQEM--IEGCPPFTMK 368
+ D + DT +++APE ++ Y TK DV+S+ ++L E+ + G P ++
Sbjct: 248 DIYKNPDY-VRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQ 306
Query: 369 HDNEVPKAYAARQRPPFKAPAKLYAR-GLKELIEECWNEKPAKRPTFRQIITRL 421
D + + +R R + A Y+ + +++ +CW+ P +RP F +++ +L
Sbjct: 307 MDED----FCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 158
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ D G+++ D +T + Y APE+ N Y+ VD+
Sbjct: 159 --------NEDCELKILDAGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 206
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 207 WSVGCIMAELLTG 219
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 27/176 (15%)
Query: 200 ELALLQKIR---HPNVVQFLGAVTQSSP-----MMIVTEYLPKGDLRAFLKRKG--ALKP 249
E+ALL+++ HPNVV+ + S + +V E++ + DLR +L + L
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 111
Query: 250 STAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFG 309
T RG+++LH N I+HRDL+P NIL G +K+ADFG
Sbjct: 112 ETIKDLMRQFLRGLDFLHANC---IVHRDLKPE-----------NILVTSGGTVKLADFG 157
Query: 310 VSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 365
++++ + + L + Y APEV Y T VD++S I EM P F
Sbjct: 158 LARIYSYQ--MALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 211
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+++L+++ H NV+ + ++++ E + G+L FL +K +L A F I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
G+NYLH K I H DL+P ++ + D+NI ++K+ DFG++ +++
Sbjct: 125 LDGVNYLHTKK---IAHFDLKPENIMLL----DKNI---PIPHIKLIDFGLAH--EIEDG 172
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 365
+ +VAPE+ E + D++S +I ++ G PF
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 26/197 (13%)
Query: 182 KLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFL 241
K + IS + F++EL ++ I++ + G +T + I+ EY+ + F
Sbjct: 75 KSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFD 134
Query: 242 -------KRKGALKPSTAVRFAL-DIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDR 293
K P ++ + + +Y+H K I HRD++PS
Sbjct: 135 EYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPS----------- 181
Query: 294 NILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNE-EYD-TKVDVFSF 351
NIL D +G +K++DFG S+ + D+ + + ++ PE F NE Y+ KVD++S
Sbjct: 182 NILMDKNGRVKLSDFGESEYMV---DKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSL 238
Query: 352 ALILQEMIEGCPPFTMK 368
+ L M PF++K
Sbjct: 239 GICLYVMFYNVVPFSLK 255
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 24/203 (11%)
Query: 174 RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMI----VT 229
R +VA+KK+ + E+ +L + RH NV+ + S+ + +
Sbjct: 67 RKTRVAIKKISP--FEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIV 124
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+ L + DL LK + L F I RG+ Y+H ++HRDL+PS
Sbjct: 125 QDLMETDLYKLLKSQ-QLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPS------- 173
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRP--LTCQDTSCRYVAPEVFKNEE-YDTKV 346
N+L + + +LK+ DFG++++ + D LT + Y APE+ N + Y +
Sbjct: 174 ----NLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSI 229
Query: 347 DVFSFALILQEMIEGCPPFTMKH 369
D++S IL EM+ P F KH
Sbjct: 230 DIWSVGCILAEMLSNRPIFPGKH 252
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+++L+++ H NV+ + ++++ E + G+L FL +K +L A F I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
G+NYLH K I H DL+P ++ + D+NI ++K+ DFG++ +++
Sbjct: 125 LDGVNYLHTKK---IAHFDLKPENIMLL----DKNI---PIPHIKLIDFGLAH--EIEDG 172
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 365
+ +VAPE+ E + D++S +I ++ G PF
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 122/287 (42%), Gaps = 41/287 (14%)
Query: 95 RGADVDPKDRWGSTPLGDAIYYKNHE--VIKLLEKHGAKPLMAPMHVKHAREVPEYEIDP 152
RG DVD + G G N++ V + +++ +P+ +KH + Y+I
Sbjct: 5 RGYDVDEQ---GKIVRGKGTVSSNYDNYVFDIWKQYYPQPV----EIKHDHVLDHYDI-- 55
Query: 153 HELDFTNSVEITKGTF-----ILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKI 207
HE E+ G F + G A K + SD + VR E+ + +
Sbjct: 56 HE-------ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRK---EIQTMSVL 105
Query: 208 RHPNVVQFLGAVTQSSPMMIVTEYLPKGDL-RAFLKRKGALKPSTAVRFALDIARGMNYL 266
RHP +V A + M+++ E++ G+L + AV + + +G+ ++
Sbjct: 106 RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 165
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD 326
HEN +H DL+P ++ S LK+ DFG++ L K+ +T
Sbjct: 166 HENN---YVHLDLKPENIM---------FTTKRSNELKLIDFGLTAHLDPKQSVKVTT-- 211
Query: 327 TSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 373
+ + APEV + + D++S ++ ++ G PF ++D+E
Sbjct: 212 GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET 258
>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin
Length = 166
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 68/120 (56%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRD 70
LL+ + D E + NG D + ++ L A E +E ++ LL +G DVN +D
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKD 77
Query: 71 IDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
D T LH+AA +G E+V +LL+ GADV+ KD+ G TPL A + E++++L K GA
Sbjct: 78 KDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGA 137
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 58/95 (61%), Gaps = 7/95 (7%)
Query: 56 IKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIY 115
++ L+ +G DVN +D D T LH+AA +G E+V +LL+ GADV+ KD+ G TPL A
Sbjct: 30 VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAR 89
Query: 116 YKNHEVIKLLEKHGA------KPLMAPMHVKHARE 144
+ E++++L K GA K P+H+ ARE
Sbjct: 90 EGHLEIVEVLLKAGADVNAKDKDGYTPLHLA-ARE 123
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 26 AELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGF 85
A++N D DG P L A E +E ++ LL +G DVN +D D T LH+AA +G
Sbjct: 71 ADVNAKDKDG--YTP---LHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGH 125
Query: 86 TEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLE 126
E+V +LL+ GADV+ +D++G T +I N ++ ++L+
Sbjct: 126 LEIVEVLLKAGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 132/302 (43%), Gaps = 51/302 (16%)
Query: 135 APMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEEV 187
AP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 15 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDR 73
Query: 188 ISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLR 238
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 74 ISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 130
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRD 298
F+ +GAL+ A F + + + H ++HRD++ D NIL D
Sbjct: 131 DFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIK-----------DENILID 176
Query: 299 -DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 356
+ G LK+ DFG LL +D T D + Y PE + Y + V+S ++L
Sbjct: 177 LNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLY 233
Query: 357 EMIEGCPPFTMKHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 415
+M+ G PF +HD E+ RQR + + LI C +P+ RPTF
Sbjct: 234 DMVCGDIPF--EHDEEIIGGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFE 282
Query: 416 QI 417
+I
Sbjct: 283 EI 284
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+++L+++ H NV+ + ++++ E + G+L FL +K +L A F I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
G+NYLH K I H DL+P ++ + D+NI ++K+ DFG++ +++
Sbjct: 125 LDGVNYLHTKK---IAHFDLKPENIMLL----DKNI---PIPHIKLIDFGLAH--EIEDG 172
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 365
+ +VAPE+ E + D++S +I ++ G PF
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+++L+++ H NV+ + ++++ E + G+L FL +K +L A F I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
G+NYLH K I H DL+P ++ + D+NI ++K+ DFG++ +++
Sbjct: 125 LDGVNYLHTKK---IAHFDLKPENIMLL----DKNI---PIPHIKLIDFGLAH--EIEDG 172
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 365
+ +VAPE+ E + D++S +I ++ G PF
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 132/302 (43%), Gaps = 51/302 (16%)
Query: 135 APMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEEV 187
AP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 3 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDR 61
Query: 188 ISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLR 238
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 62 ISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 118
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRD 298
F+ +GAL+ A F + + + H ++HRD++ D NIL D
Sbjct: 119 DFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIK-----------DENILID 164
Query: 299 -DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 356
+ G LK+ DFG LL +D T D + Y PE + Y + V+S ++L
Sbjct: 165 LNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLY 221
Query: 357 EMIEGCPPFTMKHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 415
+M+ G PF +HD E+ + RQR + + LI C +P RPTF
Sbjct: 222 DMVCGDIPF--EHDEEIIRGQVFFRQR---------VSXECQHLIRWCLALRPXDRPTFE 270
Query: 416 QI 417
+I
Sbjct: 271 EI 272
>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 169
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 65/120 (54%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRD 70
LL+ + D E + NG D + + + L A E ++ LL G DVN RD
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARD 77
Query: 71 IDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
D T LH+AA G E+V +LL+ GADV+ +D +G TPL A + E++++L KHGA
Sbjct: 78 TDGWTPLHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGA 137
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 60/105 (57%), Gaps = 5/105 (4%)
Query: 23 RKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAAC 82
+ A++N D DG P L A+ +E ++ LL G DVN +D T LH+AA
Sbjct: 68 KHGADVNARDTDG--WTP---LHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAAD 122
Query: 83 QGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEK 127
+G E+V +LL+ GADV+ +D++G T +I N ++ ++L+K
Sbjct: 123 RGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Query: 225 MMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
++IV E L G+L + ++ +G A A I + YLH + I HRD++P
Sbjct: 140 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 196
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY 342
+L Y N + LK+ DFG +K T LT + YVAPEV E+Y
Sbjct: 197 NLL--YTSKRPNAI------LKLTDFGFAKETT--SHNSLTTPCYTPYYVAPEVLGPEKY 246
Query: 343 DTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQR 382
D D++S +I+ ++ G PPF H + R R
Sbjct: 247 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 286
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 122/287 (42%), Gaps = 41/287 (14%)
Query: 95 RGADVDPKDRWGSTPLGDAIYYKNHE--VIKLLEKHGAKPLMAPMHVKHAREVPEYEIDP 152
RG DVD + G G N++ V + +++ +P+ +KH + Y+I
Sbjct: 111 RGYDVDEQ---GKIVRGKGTVSSNYDNYVFDIWKQYYPQPV----EIKHDHVLDHYDI-- 161
Query: 153 HELDFTNSVEITKGTF-----ILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKI 207
HE E+ G F + G A K + SD + VR E+ + +
Sbjct: 162 HE-------ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRK---EIQTMSVL 211
Query: 208 RHPNVVQFLGAVTQSSPMMIVTEYLPKGDL-RAFLKRKGALKPSTAVRFALDIARGMNYL 266
RHP +V A + M+++ E++ G+L + AV + + +G+ ++
Sbjct: 212 RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 271
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD 326
HEN +H DL+P ++ S LK+ DFG++ L K+ +T
Sbjct: 272 HENN---YVHLDLKPENIM---------FTTKRSNELKLIDFGLTAHLDPKQSVKVTT-- 317
Query: 327 TSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 373
+ + APEV + + D++S ++ ++ G PF ++D+E
Sbjct: 318 GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET 364
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Query: 225 MMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
++IV E L G+L + ++ +G A A I + YLH + I HRD++P
Sbjct: 104 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 160
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY 342
+L Y N + LK+ DFG +K T LT + YVAPEV E+Y
Sbjct: 161 NLL--YTSKRPNAI------LKLTDFGFAKETT--SHNSLTTPCYTPYYVAPEVLGPEKY 210
Query: 343 DTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQR 382
D D++S +I+ ++ G PPF H + R R
Sbjct: 211 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 250
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 132/302 (43%), Gaps = 51/302 (16%)
Query: 135 APMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEEV 187
AP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 16 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDR 74
Query: 188 ISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLR 238
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 75 ISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 131
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRD 298
F+ +GAL+ A F + + + H ++HRD++ D NIL D
Sbjct: 132 DFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIK-----------DENILID 177
Query: 299 -DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 356
+ G LK+ DFG LL +D T D + Y PE + Y + V+S ++L
Sbjct: 178 LNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLY 234
Query: 357 EMIEGCPPFTMKHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 415
+M+ G PF +HD E+ RQR + + LI C +P+ RPTF
Sbjct: 235 DMVCGDIPF--EHDEEIIGGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFE 283
Query: 416 QI 417
+I
Sbjct: 284 EI 285
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 158
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ D G+++ D +T + Y APE+ N Y+ VD+
Sbjct: 159 --------NEDCELKILDGGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 206
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 207 WSVGCIMAELLTG 219
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Query: 225 MMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
++IV E L G+L + ++ +G A A I + YLH + I HRD++P
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 146
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY 342
+L Y N + LK+ DFG +K T LT + YVAPEV E+Y
Sbjct: 147 NL--LYTSKRPNAI------LKLTDFGFAKETT--SHNSLTTPCYTPYYVAPEVLGPEKY 196
Query: 343 DTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQR 382
D D++S +I+ ++ G PPF H + R R
Sbjct: 197 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 236
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 132/302 (43%), Gaps = 51/302 (16%)
Query: 135 APMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEEV 187
AP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 16 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDR 74
Query: 188 ISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLR 238
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 75 ISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 131
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRD 298
F+ +GAL+ A F + + + H ++HRD++ D NIL D
Sbjct: 132 DFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIK-----------DENILID 177
Query: 299 -DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 356
+ G LK+ DFG LL +D T D + Y PE + Y + V+S ++L
Sbjct: 178 LNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLY 234
Query: 357 EMIEGCPPFTMKHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 415
+M+ G PF +HD E+ RQR + + LI C +P+ RPTF
Sbjct: 235 DMVCGDIPF--EHDEEIIGGQVFFRQRVSXEC---------QHLIRWCLALRPSDRPTFE 283
Query: 416 QI 417
+I
Sbjct: 284 EI 285
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 132/302 (43%), Gaps = 51/302 (16%)
Query: 135 APMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEEV 187
AP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 15 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDR 73
Query: 188 ISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLR 238
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 74 ISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 130
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRD 298
F+ +GAL+ A F + + + H ++HRD++ D NIL D
Sbjct: 131 DFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIK-----------DENILID 176
Query: 299 -DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 356
+ G LK+ DFG LL +D T D + Y PE + Y + V+S ++L
Sbjct: 177 LNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLY 233
Query: 357 EMIEGCPPFTMKHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 415
+M+ G PF +HD E+ RQR + + LI C +P+ RPTF
Sbjct: 234 DMVCGDIPF--EHDEEIIGGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFE 282
Query: 416 QI 417
+I
Sbjct: 283 EI 284
>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity
Complementary Protein-Protein Interface
pdb|3Q9U|D Chain D, In Silico And In Vitro Co-Evolution Of A High Affinity
Complementary Protein-Protein Interface
pdb|3Q9N|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity
Complementary Protein-Protein Interface
pdb|3Q9N|D Chain D, In Silico And In Vitro Co-Evolution Of A High Affinity
Complementary Protein-Protein Interface
Length = 158
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 68/125 (54%), Gaps = 10/125 (8%)
Query: 11 LLKQSSLAPDRERK-----EAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGID 65
LL+ ++ D E + A++N DD+G + P L A +E ++ LL +G D
Sbjct: 10 LLEAAAAGQDDEVRILMANGADVNATDDNG--LTP---LHLAAANGQLEIVEVLLKNGAD 64
Query: 66 VNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLL 125
VN D T LH+AA G E+V +LL+ GADV+ DR G TPL A E++++L
Sbjct: 65 VNASDSAGITPLHLAAYDGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVL 124
Query: 126 EKHGA 130
KHGA
Sbjct: 125 LKHGA 129
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 23 RKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAAC 82
+ A++N D G I P L A + +E ++ LL G DVN D T LH+AA
Sbjct: 60 KNGADVNASDSAG--ITP---LHLAAYDGHLEIVEVLLKHGADVNAYDRAGWTPLHLAAL 114
Query: 83 QGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLE 126
G E+V +LL+ GADV+ +D G T +I ++ ++L+
Sbjct: 115 SGQLEIVEVLLKHGADVNAQDALGLTAFDISINQGQEDLAEILQ 158
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+++L+++ H NV+ + ++++ E + G+L FL +K +L A F I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
G+NYLH K I H DL+P ++ + D+NI ++K+ DFG++ +++
Sbjct: 125 LDGVNYLHTKK---IAHFDLKPENIMLL----DKNI---PIPHIKLIDFGLAH--EIEDG 172
Query: 320 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 365
+ +VAPE+ E + D++S +I ++ G PF
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Query: 225 MMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
++IV E L G+L + ++ +G A A I + YLH + I HRD++P
Sbjct: 96 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 152
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY 342
+L Y N + LK+ DFG +K T LT + YVAPEV E+Y
Sbjct: 153 NL--LYTSKRPNAI------LKLTDFGFAKETT--SHNSLTTPCYTPYYVAPEVLGPEKY 202
Query: 343 DTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQR 382
D D++S +I+ ++ G PPF H + R R
Sbjct: 203 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 242
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 89/193 (46%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G +VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 67 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 125
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 126 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 178
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D + + Y APE+ N Y+ VD+
Sbjct: 179 --------NEDCELKILDFGLAR----HTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDI 226
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 227 WSVGCIMAELLTG 239
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 23/163 (14%)
Query: 204 LQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRF------AL 257
L RHP++V +G + + M+++ +Y+ G+L+ L G+ P+ ++ + +
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHL--YGSDLPTMSMSWEQRLEICI 146
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLT-V 316
ARG++YLH IIHRD++ NIL D++ K+ DFG+SK T +
Sbjct: 147 GAARGLHYLHTR---AIIHRDVKSI-----------NILLDENFVPKITDFGISKKGTEL 192
Query: 317 KEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI 359
+ + Y+ PE F K DV+SF ++L E++
Sbjct: 193 GQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 95/198 (47%), Gaps = 23/198 (11%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTE-YLP 233
G +VA+KKL S+ RA+R EL LL+ ++H NV+ L T +S + + YL
Sbjct: 49 GEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 107
Query: 234 KGDLRAFLKRKGALKPS--TAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
++ L++ LK S + +G+ Y+H ++HRDL+P +L V
Sbjct: 108 MPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAV----- 159
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFS 350
++ LK+ DFG+++ D +T + Y APEV + Y+ VD++S
Sbjct: 160 ------NEDCELKILDFGLAR----HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWS 209
Query: 351 FALILQEMIEGCPPFTMK 368
I+ EM+ G F K
Sbjct: 210 VGCIMAEMLTGKTLFKGK 227
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 132/302 (43%), Gaps = 51/302 (16%)
Query: 135 APMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEEV 187
AP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 16 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDR 74
Query: 188 ISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLR 238
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 75 ISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 131
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRD 298
F+ +GAL+ A F + + + H ++HRD++ D NIL D
Sbjct: 132 DFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIK-----------DENILID 177
Query: 299 -DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 356
+ G LK+ DFG LL +D T D + Y PE + Y + V+S ++L
Sbjct: 178 LNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLY 234
Query: 357 EMIEGCPPFTMKHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 415
+M+ G PF +HD E+ RQR + + LI C +P+ RPTF
Sbjct: 235 DMVCGDIPF--EHDEEIIGGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFE 283
Query: 416 QI 417
+I
Sbjct: 284 EI 285
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 158
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ D G+++ D +T + Y APE+ N Y+ VD+
Sbjct: 159 --------NEDCELKILDRGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 206
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 207 WSVGCIMAELLTG 219
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Query: 225 MMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
++IV E L G+L + ++ +G A A I + YLH + I HRD++P
Sbjct: 134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 190
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY 342
+L Y N + LK+ DFG +K T LT + YVAPEV E+Y
Sbjct: 191 NLL--YTSKRPNAI------LKLTDFGFAKETT--SHNSLTTPCYTPYYVAPEVLGPEKY 240
Query: 343 DTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQR 382
D D++S +I+ ++ G PPF H + R R
Sbjct: 241 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 280
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 31/226 (13%)
Query: 157 FTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 80
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 138
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRP--LTC 324
H ++HRDL+PS N+L + + +LK+ DFG++++ D LT
Sbjct: 139 HSAN---VLHRDLKPS-----------NLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 184
Query: 325 QDTSCRYVAPEVFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 369
+ Y APE+ N + Y +D++S IL EM+ P F KH
Sbjct: 185 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 132/302 (43%), Gaps = 51/302 (16%)
Query: 135 APMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEEV 187
AP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 16 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDR 74
Query: 188 ISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLR 238
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 75 ISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 131
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRD 298
F+ +GAL+ A F + + + H ++HRD++ D NIL D
Sbjct: 132 DFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIK-----------DENILID 177
Query: 299 -DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 356
+ G LK+ DFG LL +D T D + Y PE + Y + V+S ++L
Sbjct: 178 LNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLY 234
Query: 357 EMIEGCPPFTMKHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 415
+M+ G PF +HD E+ RQR + + LI C +P+ RPTF
Sbjct: 235 DMVCGDIPF--EHDEEIIGGQVFFRQRVSXEC---------QHLIRWCLALRPSDRPTFE 283
Query: 416 QI 417
+I
Sbjct: 284 EI 285
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 132/302 (43%), Gaps = 51/302 (16%)
Query: 135 APMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEEV 187
AP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 15 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDR 73
Query: 188 ISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLR 238
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 74 ISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 130
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRD 298
F+ +GAL+ A F + + + H ++HRD++ D NIL D
Sbjct: 131 DFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIK-----------DENILID 176
Query: 299 -DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 356
+ G LK+ DFG LL +D T D + Y PE + Y + V+S ++L
Sbjct: 177 LNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLY 233
Query: 357 EMIEGCPPFTMKHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 415
+M+ G PF +HD E+ RQR + + LI C +P+ RPTF
Sbjct: 234 DMVCGDIPF--EHDEEIIGGQVFFRQR---------VSXECQHLIRWCLALRPSDRPTFE 282
Query: 416 QI 417
+I
Sbjct: 283 EI 284
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 16/173 (9%)
Query: 197 FRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLR-AFLKRKGA---LKPSTA 252
+ E ++ ++HP++V+ L + + +V E++ DL +KR A + A
Sbjct: 75 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 134
Query: 253 VRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK 312
+ I + Y H+N IIHRD++P + +A +N S +K+ FGV+
Sbjct: 135 SHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKEN--------SAPVKLGGFGVAI 183
Query: 313 LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 365
L + + + ++APEV K E Y VDV+ +IL ++ GC PF
Sbjct: 184 QLG-ESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 235
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Query: 225 MMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
++IV E L G+L + ++ +G A A I + YLH + I HRD++P
Sbjct: 94 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 150
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY 342
+L Y N + LK+ DFG +K T LT + YVAPEV E+Y
Sbjct: 151 NL--LYTSKRPNAI------LKLTDFGFAKETT--SHNSLTTPCYTPYYVAPEVLGPEKY 200
Query: 343 DTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQR 382
D D++S +I+ ++ G PPF H + R R
Sbjct: 201 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 240
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 31/226 (13%)
Query: 157 FTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 80
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 138
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRP--LTC 324
H ++HRDL+PS N+L + + +LK+ DFG++++ D LT
Sbjct: 139 HSAN---VLHRDLKPS-----------NLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 184
Query: 325 QDTSCRYVAPEVFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 369
+ Y APE+ N + Y +D++S IL EM+ P F KH
Sbjct: 185 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Query: 225 MMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
++IV E L G+L + ++ +G A A I + YLH + I HRD++P
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 146
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY 342
+L Y N + LK+ DFG +K T LT + YVAPEV E+Y
Sbjct: 147 NL--LYTSKRPNAI------LKLTDFGFAKETT--SHNSLTTPCYTPYYVAPEVLGPEKY 196
Query: 343 DTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQR 382
D D++S +I+ ++ G PPF H + R R
Sbjct: 197 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 236
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 16/173 (9%)
Query: 197 FRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL-RAFLKRKGA---LKPSTA 252
+ E ++ ++HP++V+ L + + +V E++ DL +KR A + A
Sbjct: 73 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 132
Query: 253 VRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK 312
+ I + Y H+N IIHRD++P + +A +N S +K+ FGV+
Sbjct: 133 SHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKEN--------SAPVKLGGFGVAI 181
Query: 313 LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 365
L + + + ++APEV K E Y VDV+ +IL ++ GC PF
Sbjct: 182 QLG-ESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 31/226 (13%)
Query: 157 FTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 87
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 145
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRP--LTC 324
H ++HRDL+PS N+L + + +LK+ DFG++++ D LT
Sbjct: 146 HSAN---VLHRDLKPS-----------NLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 191
Query: 325 QDTSCRYVAPEVFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 369
+ Y APE+ N + Y +D++S IL EM+ P F KH
Sbjct: 192 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 31/226 (13%)
Query: 157 FTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 86
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 144
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRP--LTC 324
H ++HRDL+PS N+L + + +LK+ DFG++++ D LT
Sbjct: 145 HSAN---VLHRDLKPS-----------NLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 190
Query: 325 QDTSCRYVAPEVFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 369
+ Y APE+ N + Y +D++S IL EM+ P F KH
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Query: 225 MMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
++IV E L G+L + ++ +G A A I + YLH + I HRD++P
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 144
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY 342
+L Y N + LK+ DFG +K T LT + YVAPEV E+Y
Sbjct: 145 NL--LYTSKRPNAI------LKLTDFGFAKETT--SHNSLTTPCYTPYYVAPEVLGPEKY 194
Query: 343 DTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQR 382
D D++S +I+ ++ G PPF H + R R
Sbjct: 195 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 234
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 31/226 (13%)
Query: 157 FTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 88
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 89 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 146
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRP--LTC 324
H ++HRDL+PS N+L + + +LK+ DFG++++ D LT
Sbjct: 147 HSAN---VLHRDLKPS-----------NLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 192
Query: 325 QDTSCRYVAPEVFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 369
+ Y APE+ N + Y +D++S IL EM+ P F KH
Sbjct: 193 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 238
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 31/226 (13%)
Query: 157 FTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 79
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 80 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 137
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRP--LTC 324
H ++HRDL+PS N+L + + +LK+ DFG++++ D LT
Sbjct: 138 HSAN---VLHRDLKPS-----------NLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 183
Query: 325 QDTSCRYVAPEVFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 369
+ Y APE+ N + Y +D++S IL EM+ P F KH
Sbjct: 184 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 229
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 31/226 (13%)
Query: 157 FTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 86
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 144
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRP--LTC 324
H ++HRDL+PS N+L + + +LK+ DFG++++ D LT
Sbjct: 145 HSAN---VLHRDLKPS-----------NLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 190
Query: 325 QDTSCRYVAPEVFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 369
+ Y APE+ N + Y +D++S IL EM+ P F KH
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 81/172 (47%), Gaps = 16/172 (9%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+ LL++++H N+V+ + + +V E+ + + F G L P F +
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQL 110
Query: 260 ARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKED 319
+G+ + H ++HRDL+P +N+L + +G LK+ADFG+++ +
Sbjct: 111 LKGLGFCHSRN---VLHRDLKP-----------QNLLINRNGELKLADFGLARAFGIPV- 155
Query: 320 RPLTCQDTSCRYVAPEV-FKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHD 370
R + + + Y P+V F + Y T +D++S I E+ P +D
Sbjct: 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGND 207
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 35/228 (15%)
Query: 157 FTNSVEITKGTFILAF-----WRGIQVAVKKLG--EEVISDDDRVRAFRDELALLQKIRH 209
+TN I +G + + ++VA+KK+ E +R E+ +L + RH
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLR----EIKILLRFRH 84
Query: 210 PNVVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMN 264
N++ + Q + IV + L + DL LK + L F I RG+
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLK 142
Query: 265 YLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRP--L 322
Y+H ++HRDL+PS N+L + + +LK+ DFG++++ D L
Sbjct: 143 YIHSAN---VLHRDLKPS-----------NLLLNTTXDLKICDFGLARVADPDHDHTGFL 188
Query: 323 TCQDTSCRYVAPEVFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 369
T + Y APE+ N + Y +D++S IL EM+ P F KH
Sbjct: 189 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat
Protein
pdb|2BKG|B Chain B, Crystal Structure Of E3_19 An Designed Ankyrin Repeat
Protein
Length = 166
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 66/120 (55%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRD 70
LL+ + D E + NG D + E+ + L A +E ++ LL +G DVN D
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALD 77
Query: 71 IDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
T LH+AA +G E+V +LL+ GADV+ D GSTPL A + E++++L K+GA
Sbjct: 78 FSGSTPLHLAAKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGA 137
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%)
Query: 29 NGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEV 88
NG D + + L A +E ++ LL G DVN D T LH+AA G E+
Sbjct: 69 NGADVNALDFSGSTPLHLAAKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEI 128
Query: 89 VSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLE 126
V +LL+ GADV+ +D++G T +I N ++ ++L+
Sbjct: 129 VEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Query: 225 MMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
++IV E L G+L + ++ +G A A I + YLH + I HRD++P
Sbjct: 95 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 151
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY 342
+L Y N + LK+ DFG +K T LT + YVAPEV E+Y
Sbjct: 152 NL--LYTSKRPNAI------LKLTDFGFAKETT--SHNSLTTPCYTPYYVAPEVLGPEKY 201
Query: 343 DTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQR 382
D D++S +I+ ++ G PPF H + R R
Sbjct: 202 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 241
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 23/163 (14%)
Query: 204 LQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRF------AL 257
L RHP++V +G + + M+++ +Y+ G+L+ L G+ P+ ++ + +
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHL--YGSDLPTMSMSWEQRLEICI 146
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLT-V 316
ARG++YLH IIHRD++ NIL D++ K+ DFG+SK T +
Sbjct: 147 GAARGLHYLHTR---AIIHRDVKSI-----------NILLDENFVPKITDFGISKKGTEL 192
Query: 317 KEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI 359
+ + Y+ PE F K DV+SF ++L E++
Sbjct: 193 DQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 34/224 (15%)
Query: 200 ELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEY-LPKGDLRAFLKRKGALKPSTAVRFA 256
E+ LL+K+ V++ L + +++ E P DL F+ +GAL+ A F
Sbjct: 57 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 116
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRD-DSGNLKVADFGVSKLLT 315
+ + + H ++HRD++ D NIL D + G LK+ DFG LL
Sbjct: 117 WQVLEAVRHCHNXG---VLHRDIK-----------DENILIDLNRGELKLIDFGSGALL- 161
Query: 316 VKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTMKHDNEVP 374
+D T D + Y PE + Y + V+S ++L +M+ G PF +HD E+
Sbjct: 162 --KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 217
Query: 375 KAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 417
+ RQR + + LI C +P+ RPTF +I
Sbjct: 218 RGQVFFRQRVSXEC---------QHLIRWCLALRPSDRPTFEEI 252
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Query: 225 MMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
++IV E L G+L + ++ +G A A I + YLH + I HRD++P
Sbjct: 89 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 145
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY 342
+L Y N + LK+ DFG +K T LT + YVAPEV E+Y
Sbjct: 146 NL--LYTSKRPNAI------LKLTDFGFAKETT--SHNSLTTPCYTPYYVAPEVLGPEKY 195
Query: 343 DTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQR 382
D D++S +I+ ++ G PPF H + R R
Sbjct: 196 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 235
>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Maltose Binding Protein
Length = 169
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 6/90 (6%)
Query: 56 IKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIY 115
++ L+ +G DVN D T LH+AA G E+V +LL+ GADVD D +G TPL A Y
Sbjct: 30 VRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAY 89
Query: 116 YKNHEVIKLLEKHGA------KPLMAPMHV 139
+ + E++++L K+GA M P+H+
Sbjct: 90 WGHLEIVEVLLKNGADVNAMDSDGMTPLHL 119
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 62/120 (51%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRD 70
LL+ + D E + NG D + + L A +E ++ LL G DV+ D
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASD 77
Query: 71 IDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
+ T LH+AA G E+V +LL+ GADV+ D G TPL A + E++++L KHGA
Sbjct: 78 VFGYTPLHLAAYWGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGA 137
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%)
Query: 29 NGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEV 88
+G D D ++ L A +E ++ LL +G DVN D D T LH+AA G+ E+
Sbjct: 69 HGADVDASDVFGYTPLHLAAYWGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEI 128
Query: 89 VSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEK 127
V +LL+ GADV+ +D++G T +I N ++ ++L+K
Sbjct: 129 VEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 96/189 (50%), Gaps = 13/189 (6%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+K++ E + A R E++LL++++H N+++ + + + ++ EY + DL
Sbjct: 62 VAIKRIRLEHEEEGVPGTAIR-EVSLLKELQHRNIIELKSVIHHNHRLHLIFEY-AENDL 119
Query: 238 RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILR 297
+ ++ + + F + G+N+ H + +HRDL+P +L ++ +D +
Sbjct: 120 KKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSV--SDAS--- 171
Query: 298 DDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEV-FKNEEYDTKVDVFSFALILQ 356
++ LK+ DFG+++ + R T + + Y PE+ + Y T VD++S A I
Sbjct: 172 -ETPVLKIGDFGLARAFGIP-IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWA 229
Query: 357 EMIEGCPPF 365
EM+ P F
Sbjct: 230 EMLMKTPLF 238
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 83/177 (46%), Gaps = 27/177 (15%)
Query: 197 FRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRF- 255
F +E ++ P VVQ A + +V EY+P GDL + P RF
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV--PEKWARFY 178
Query: 256 ALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLT 315
++ ++ +H + IHRD++P N+L D SG+LK+ADFG +
Sbjct: 179 TAEVVLALDAIHS---MGFIHRDVKPD-----------NMLLDKSGHLKLADFGTC--MK 222
Query: 316 VKEDRPLTCQDTSCR---YVAPEVFKNEE----YDTKVDVFSFALILQEMIEGCPPF 365
+ ++ + C DT+ Y++PEV K++ Y + D +S + L EM+ G PF
Sbjct: 223 MNKEGMVRC-DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 31/226 (13%)
Query: 157 FTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 82
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 140
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRP--LTC 324
H ++HRDL+PS N+L + + +LK+ DFG++++ D LT
Sbjct: 141 HSAN---VLHRDLKPS-----------NLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 186
Query: 325 QDTSCRYVAPEVFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 369
+ Y APE+ N + Y +D++S IL EM+ P F KH
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 26/202 (12%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQF-----LGAVTQSSPMMIVTE 230
++VA+KK+ + E+ +L + RH N++ + Q + IV +
Sbjct: 49 VRVAIKKISP--FEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 106
Query: 231 YLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQ 290
L + DL LK + L F I RG+ Y+H ++HRDL+PS
Sbjct: 107 -LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPS-------- 153
Query: 291 NDRNILRDDSGNLKVADFGVSKLLTVKEDRP--LTCQDTSCRYVAPEVFKNEE-YDTKVD 347
N+L + + +LK+ DFG++++ D LT + Y APE+ N + Y +D
Sbjct: 154 ---NLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 210
Query: 348 VFSFALILQEMIEGCPPFTMKH 369
++S IL EM+ P F KH
Sbjct: 211 IWSVGCILAEMLSNRPIFPGKH 232
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 83/177 (46%), Gaps = 27/177 (15%)
Query: 197 FRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRF- 255
F +E ++ P VVQ A + +V EY+P GDL + P RF
Sbjct: 116 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV--PEKWARFY 173
Query: 256 ALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLT 315
++ ++ +H + IHRD++P N+L D SG+LK+ADFG +
Sbjct: 174 TAEVVLALDAIHS---MGFIHRDVKPD-----------NMLLDKSGHLKLADFGTC--MK 217
Query: 316 VKEDRPLTCQDTSC---RYVAPEVFKNEE----YDTKVDVFSFALILQEMIEGCPPF 365
+ ++ + C DT+ Y++PEV K++ Y + D +S + L EM+ G PF
Sbjct: 218 MNKEGMVRC-DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 83/177 (46%), Gaps = 27/177 (15%)
Query: 197 FRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRF- 255
F +E ++ P VVQ A + +V EY+P GDL + P RF
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV--PEKWARFY 178
Query: 256 ALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLT 315
++ ++ +H + IHRD++P N+L D SG+LK+ADFG +
Sbjct: 179 TAEVVLALDAIHS---MGFIHRDVKPD-----------NMLLDKSGHLKLADFGTC--MK 222
Query: 316 VKEDRPLTCQDTSCR---YVAPEVFKNEE----YDTKVDVFSFALILQEMIEGCPPF 365
+ ++ + C DT+ Y++PEV K++ Y + D +S + L EM+ G PF
Sbjct: 223 MNKEGMVRC-DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 31/226 (13%)
Query: 157 FTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 84
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 142
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRP--LTC 324
H ++HRDL+PS N+L + + +LK+ DFG++++ D LT
Sbjct: 143 HSAN---VLHRDLKPS-----------NLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 188
Query: 325 QDTSCRYVAPEVFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 369
+ Y APE+ N + Y +D++S IL EM+ P F KH
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 26/202 (12%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQF-----LGAVTQSSPMMIVTE 230
++VA+KK+ + E+ +L + RH N++ + Q + IV +
Sbjct: 49 VRVAIKKISP--FEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 106
Query: 231 YLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQ 290
L + DL LK + L F I RG+ Y+H ++HRDL+PS
Sbjct: 107 -LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPS-------- 153
Query: 291 NDRNILRDDSGNLKVADFGVSKLLTVKEDRP--LTCQDTSCRYVAPEVFKNEE-YDTKVD 347
N+L + + +LK+ DFG++++ D LT + Y APE+ N + Y +D
Sbjct: 154 ---NLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 210
Query: 348 VFSFALILQEMIEGCPPFTMKH 369
++S IL EM+ P F KH
Sbjct: 211 IWSVGCILAEMLSNRPIFPGKH 232
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 101/220 (45%), Gaps = 23/220 (10%)
Query: 198 RDELALLQKIRH-PNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFA 256
R E +L+ IR P +V A + + ++ +Y+ G+L L ++ +
Sbjct: 106 RTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYV 165
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTV 316
+I + +LH+ + II+RD++ NIL D +G++ + DFG+SK
Sbjct: 166 GEIVLALEHLHK---LGIIYRDIKL-----------ENILLDSNGHVVLTDFGLSKEFVA 211
Query: 317 KEDRPLTCQDTSCRYVAPEVFKNEE--YDTKVDVFSFALILQEMIEGCPPFTMKHDNEVP 374
E + Y+AP++ + + +D VD +S +++ E++ G PFT+ +
Sbjct: 212 DETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ 271
Query: 375 KAYAAR---QRPPFKAPAKLYARGLKELIEECWNEKPAKR 411
+ R PP+ P ++ A K+LI+ + P KR
Sbjct: 272 AEISRRILKSEPPY--PQEMSALA-KDLIQRLLMKDPKKR 308
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 25/207 (12%)
Query: 175 GIQVAVKKLGEEVISDDDRV--RAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYL 232
G VA+KK E SDDD++ + E+ LL+++RH N+V L + +V E++
Sbjct: 50 GRIVAIKKFLE---SDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFV 106
Query: 233 PKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQND 292
L L ++ I G+ + H + IIHRD++P
Sbjct: 107 DHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPE---------- 153
Query: 293 RNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR-YVAPEVFKNE-EYDTKVDVFS 350
NIL SG +K+ DFG ++ L + + + + R Y APE+ + +Y VDV++
Sbjct: 154 -NILVSQSGVVKLCDFGFARTLAAPGE--VYDDEVATRWYRAPELLVGDVKYGKAVDVWA 210
Query: 351 FALILQEMIEGCPPFTMKHDNEVPKAY 377
++ EM G P F D+++ + Y
Sbjct: 211 IGCLVTEMFMGEPLFP--GDSDIDQLY 235
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 31/226 (13%)
Query: 157 FTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 90
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 91 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 148
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRP--LTC 324
H ++HRDL+PS N+L + + +LK+ DFG++++ D LT
Sbjct: 149 HSAN---VLHRDLKPS-----------NLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 194
Query: 325 QDTSCRYVAPEVFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 369
+ Y APE+ N + Y +D++S IL EM+ P F KH
Sbjct: 195 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 240
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 31/226 (13%)
Query: 157 FTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 82
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 140
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRP--LTC 324
H ++HRDL+PS N+L + + +LK+ DFG++++ D LT
Sbjct: 141 HSAN---VLHRDLKPS-----------NLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 186
Query: 325 QDTSCRYVAPEVFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 369
+ Y APE+ N + Y +D++S IL EM+ P F KH
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 89/193 (46%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G +VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 158
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D + + Y APE+ N Y+ VD+
Sbjct: 159 --------NEDCELKILDFGLAR----HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDI 206
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 207 WSVGCIMAELLTG 219
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 89/193 (46%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G +VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 101
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 102 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 154
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D + + Y APE+ N Y+ VD+
Sbjct: 155 --------NEDCELKILDFGLAR----HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDI 202
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 203 WSVGCIMAELLTG 215
>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex
Length = 169
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 50/75 (66%)
Query: 56 IKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIY 115
++ L+ +G DVN D +T LH+AA +G E+V +LL+ GADV+ D+ G TPL A
Sbjct: 30 VRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMGDTPLHLAAL 89
Query: 116 YKNHEVIKLLEKHGA 130
Y + E++++L K+GA
Sbjct: 90 YGHLEIVEVLLKNGA 104
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 65/120 (54%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRD 70
LL+ + D E + NG D + E+ + L A + +E ++ LL G DVN D
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAAD 77
Query: 71 IDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
T LH+AA G E+V +LL+ GADV+ D +G TPL A + E++++L K+GA
Sbjct: 78 KMGDTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGA 137
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%)
Query: 53 VEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGD 112
+E ++ LL +G DVN D T LH+AA G E+V +LL+ GADV+ +D++G T
Sbjct: 93 LEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVNAQDKFGKTAFDI 152
Query: 113 AIYYKNHEVIKLLEK 127
+I N ++ ++L+K
Sbjct: 153 SIDNGNEDLAEILQK 167
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 31/226 (13%)
Query: 157 FTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 102
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 103 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 160
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRP--LTC 324
H ++HRDL+PS N+L + + +LK+ DFG++++ D LT
Sbjct: 161 HSAN---VLHRDLKPS-----------NLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 206
Query: 325 QDTSCRYVAPEVFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 369
+ Y APE+ N + Y +D++S IL EM+ P F KH
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 31/226 (13%)
Query: 157 FTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 86
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKCQ-HLSNDHICYFLYQILRGLKYI 144
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRP--LTC 324
H ++HRDL+PS N+L + + +LK+ DFG++++ D LT
Sbjct: 145 HSAN---VLHRDLKPS-----------NLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 190
Query: 325 QDTSCRYVAPEVFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 369
+ Y APE+ N + Y +D++S IL EM+ P F KH
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 89/193 (46%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G +VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 158
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DFG+++ D + + Y APE+ N Y+ VD+
Sbjct: 159 --------NEDCELKILDFGLAR----HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDI 206
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 207 WSVGCIMAELLTG 219
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 34/224 (15%)
Query: 200 ELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEY-LPKGDLRAFLKRKGALKPSTAVRFA 256
E+ LL+K+ V++ L + +++ E P DL F+ +GAL+ A F
Sbjct: 60 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 119
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRD-DSGNLKVADFGVSKLLT 315
+ + + H ++HRD++ D NIL D + G LK+ DFG LL
Sbjct: 120 WQVLEAVRHCHN---CGVLHRDIK-----------DENILIDLNRGELKLIDFGSGALL- 164
Query: 316 VKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTMKHDNEVP 374
+D T D + Y PE + Y + V+S ++L +M+ G PF +HD E+
Sbjct: 165 --KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 220
Query: 375 KAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 417
+ RQR + + LI C +P+ RPTF +I
Sbjct: 221 RGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFEEI 255
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 34/224 (15%)
Query: 200 ELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEY-LPKGDLRAFLKRKGALKPSTAVRFA 256
E+ LL+K+ V++ L + +++ E P DL F+ +GAL+ A F
Sbjct: 57 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 116
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRD-DSGNLKVADFGVSKLLT 315
+ + + H ++HRD++ D NIL D + G LK+ DFG LL
Sbjct: 117 WQVLEAVRHCHN---CGVLHRDIK-----------DENILIDLNRGELKLIDFGSGALL- 161
Query: 316 VKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTMKHDNEVP 374
+D T D + Y PE + Y + V+S ++L +M+ G PF +HD E+
Sbjct: 162 --KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 217
Query: 375 KAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 417
+ RQR + + LI C +P+ RPTF +I
Sbjct: 218 RGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFEEI 252
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 26/202 (12%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQF-----LGAVTQSSPMMIVTE 230
++VA+KK+ + E+ +L + RH N++ + Q + IV +
Sbjct: 49 VRVAIKKISP--FEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 106
Query: 231 YLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQ 290
L + DL LK + L F I RG+ Y+H ++HRDL+PS
Sbjct: 107 -LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPS-------- 153
Query: 291 NDRNILRDDSGNLKVADFGVSKLLTVKEDRP--LTCQDTSCRYVAPEVFKNEE-YDTKVD 347
N+L + + +LK+ DFG++++ D LT + Y APE+ N + Y +D
Sbjct: 154 ---NLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 210
Query: 348 VFSFALILQEMIEGCPPFTMKH 369
++S IL EM+ P F KH
Sbjct: 211 IWSVGCILAEMLSNRPIFPGKH 232
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 34/224 (15%)
Query: 200 ELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLRAFLKRKGALKPSTAVRFA 256
E+ LL+K+ V++ L + +++ E P DL F+ +GAL+ A F
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRD-DSGNLKVADFGVSKLLT 315
+ + + H ++HRD++ D NIL D + G LK+ DFG LL
Sbjct: 122 WQVLEAVRHCHN---CGVLHRDIK-----------DENILIDLNRGELKLIDFGSGALL- 166
Query: 316 VKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTMKHDNEVP 374
+D T D + Y PE + Y + V+S ++L +M+ G PF +HD E+
Sbjct: 167 --KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 222
Query: 375 KAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 417
+ RQR + + LI C +P+ RPTF +I
Sbjct: 223 RGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 120/274 (43%), Gaps = 19/274 (6%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A K + + +S D + R E + + ++HPN+V+ ++++ +V + + G+
Sbjct: 58 EYAAKIINTKKLSARDHQKLER-EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGE 116
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
L + + + A I +N++H++ I+HRDL+P +L +A
Sbjct: 117 LFEDIVAREYYSEADASHCIHQILESVNHIHQHD---IVHRDLKPENLLLAS-------- 165
Query: 297 RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQ 356
+ +K+ADFG++ + ++ T Y++PEV + + Y VD+++ +IL
Sbjct: 166 KCKGAAVKLADFGLAIEVQGEQQAWFGFAGTP-GYLSPEVLRKDPYGKPVDIWACGVILY 224
Query: 357 EMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLY---ARGLKELIEECWNEKPAKRPT 413
++ G PPF D + K Y + + P+ + K LI + PAKR T
Sbjct: 225 ILLVGYPPFW---DEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRIT 281
Query: 414 FRQIITRLESINNSINHKRRWKIRTMKCFHNLEA 447
Q + S + T++C A
Sbjct: 282 ADQALKHPWVCQRSTVASMMHRQETVECLRKFNA 315
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 24/178 (13%)
Query: 200 ELALLQKIRHPNVVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVR 254
E+ +L + RH N++ + Q + IV + L + DL LK + L
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICY 132
Query: 255 FALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLL 314
F I RG+ Y+H ++HRDL+PS N+L + + +LK+ DFG++++
Sbjct: 133 FLYQILRGLKYIHSAN---VLHRDLKPS-----------NLLLNTTCDLKICDFGLARVA 178
Query: 315 TVKEDRP--LTCQDTSCRYVAPEVFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 369
D LT + Y APE+ N + Y +D++S IL EM+ P F KH
Sbjct: 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 34/224 (15%)
Query: 200 ELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLRAFLKRKGALKPSTAVRFA 256
E+ LL+K+ V++ L + +++ E P DL F+ +GAL+ A F
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRD-DSGNLKVADFGVSKLLT 315
+ + + H ++HRD++ D NIL D + G LK+ DFG LL
Sbjct: 122 WQVLEAVRHCHN---CGVLHRDIK-----------DENILIDLNRGELKLIDFGSGALL- 166
Query: 316 VKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTMKHDNEVP 374
+D T D + Y PE + Y + V+S ++L +M+ G PF +HD E+
Sbjct: 167 --KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 222
Query: 375 KAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 417
+ RQR + + LI C +P+ RPTF +I
Sbjct: 223 RGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Query: 225 MMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
++IV E L G+L + ++ +G A A I + YLH + I HRD++P
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 144
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY 342
+L Y N + LK+ DFG +K T C + YVAPEV E+Y
Sbjct: 145 NL--LYTSKRPNAI------LKLTDFGFAKETTSHNSLTEPCY--TPYYVAPEVLGPEKY 194
Query: 343 DTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQR 382
D D++S +I+ ++ G PPF H + R R
Sbjct: 195 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 234
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 113/254 (44%), Gaps = 43/254 (16%)
Query: 176 IQVAVKKLGEEVISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMI 227
+ VA+K + ++ ISD RV E+ LL+K+ V++ L + ++
Sbjct: 77 LPVAIKHVEKDRISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVL 133
Query: 228 VTEYL-PKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYV 286
+ E P DL F+ +GAL+ A F + + + H ++HRD++
Sbjct: 134 ILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIK------ 184
Query: 287 AYWQNDRNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK 345
D NIL D + G LK+ DFG LL +D T D + Y PE + Y +
Sbjct: 185 -----DENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGR 236
Query: 346 -VDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEEC 403
V+S ++L +M+ G PF +HD E+ + RQR + + LI C
Sbjct: 237 SAAVWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQR---------VSSECQHLIRWC 285
Query: 404 WNEKPAKRPTFRQI 417
+P+ RPTF +I
Sbjct: 286 LALRPSDRPTFEEI 299
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 34/224 (15%)
Query: 200 ELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLRAFLKRKGALKPSTAVRFA 256
E+ LL+K+ V++ L + +++ E P DL F+ +GAL+ A F
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 120
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRD-DSGNLKVADFGVSKLLT 315
+ + + H ++HRD++ D NIL D + G LK+ DFG LL
Sbjct: 121 WQVLEAVRHCHN---CGVLHRDIK-----------DENILIDLNRGELKLIDFGSGALL- 165
Query: 316 VKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTMKHDNEVP 374
+D T D + Y PE + Y + V+S ++L +M+ G PF +HD E+
Sbjct: 166 --KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 221
Query: 375 KAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 417
+ RQR + + LI C +P+ RPTF +I
Sbjct: 222 RGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 31/226 (13%)
Query: 157 FTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L RH N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLAFRHEN 84
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 142
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRP--LTC 324
H ++HRDL+PS N+L + + +LK+ DFG++++ D LT
Sbjct: 143 HSAN---VLHRDLKPS-----------NLLLNTTSDLKICDFGLARVADPDHDHTGFLTE 188
Query: 325 QDTSCRYVAPEVFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 369
+ Y APE+ N + Y +D++S IL EM+ P F KH
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 129/302 (42%), Gaps = 35/302 (11%)
Query: 129 GAKPLMAPMHVKHA--REVPEYEIDPHE----LD-FTNSVEITKGTFILAFWR--GIQVA 179
G+ P P V H R + +DP + LD F E + G +A R G VA
Sbjct: 1 GSSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVA 60
Query: 180 VKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRA 239
VKK+ + R +E+ +++ +H NVV+ + + +V E+L G L
Sbjct: 61 VKKMD---LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD 117
Query: 240 FLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDD 299
+ + A L + + ++ LH +IHRD++ SD +IL
Sbjct: 118 IVTHTRMNEEQIAA-VCLAVLQALSVLHAQG---VIHRDIK-SD----------SILLTH 162
Query: 300 SGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI 359
G +K++DFG ++ + R T ++APE+ Y +VD++S +++ EM+
Sbjct: 163 DGRVKLSDFGFCAQVSKEVPRRKXLVGTPY-WMAPELISRLPYGPEVDIWSLGIMVIEMV 221
Query: 360 EGCPPFTMKHDNEVPKAYAARQR---PPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQ 416
+G PP+ NE P R PP + LK ++ PA+R T +
Sbjct: 222 DGEPPYF----NEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAE 277
Query: 417 II 418
++
Sbjct: 278 LL 279
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 34/224 (15%)
Query: 200 ELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLRAFLKRKGALKPSTAVRFA 256
E+ LL+K+ V++ L + +++ E P DL F+ +GAL+ A F
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRD-DSGNLKVADFGVSKLLT 315
+ + + H ++HRD++ D NIL D + G LK+ DFG LL
Sbjct: 122 WQVLEAVRHCHN---CGVLHRDIK-----------DENILIDLNRGELKLIDFGSGALL- 166
Query: 316 VKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTMKHDNEVP 374
+D T D + Y PE + Y + V+S ++L +M+ G PF +HD E+
Sbjct: 167 --KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 222
Query: 375 KAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 417
+ RQR + + LI C +P+ RPTF +I
Sbjct: 223 RGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 31/226 (13%)
Query: 157 FTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 86
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 144
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRP-LTCQ 325
H ++HRDL+PS N+L + + +LK+ DFG++++ D +
Sbjct: 145 HSAN---VLHRDLKPS-----------NLLLNTTCDLKICDFGLARVADPDHDHTGFLXE 190
Query: 326 DTSCR-YVAPEVFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 369
+ R Y APE+ N + Y +D++S IL EM+ P F KH
Sbjct: 191 XVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 31/226 (13%)
Query: 157 FTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 87
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 145
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRP-LTCQ 325
H ++HRDL+PS N+L + + +LK+ DFG++++ D +
Sbjct: 146 HSAN---VLHRDLKPS-----------NLLLNTTCDLKICDFGLARVADPDHDHTGFLXE 191
Query: 326 DTSCR-YVAPEVFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 369
+ R Y APE+ N + Y +D++S IL EM+ P F KH
Sbjct: 192 XVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 34/224 (15%)
Query: 200 ELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLRAFLKRKGALKPSTAVRFA 256
E+ LL+K+ V++ L + +++ E P DL F+ +GAL+ A F
Sbjct: 84 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 143
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRD-DSGNLKVADFGVSKLLT 315
+ + + H ++HRD++ D NIL D + G LK+ DFG LL
Sbjct: 144 WQVLEAVRHCHN---CGVLHRDIK-----------DENILIDLNRGELKLIDFGSGALL- 188
Query: 316 VKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTMKHDNEVP 374
+D T D + Y PE + Y + V+S ++L +M+ G PF +HD E+
Sbjct: 189 --KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 244
Query: 375 KAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 417
+ RQR + + LI C +P+ RPTF +I
Sbjct: 245 RGQVFFRQRVSXEC---------QHLIRWCLALRPSDRPTFEEI 279
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 88/201 (43%), Gaps = 34/201 (16%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
GI VAVKKL + RA+R EL LL+ + H N++ L T P + E+
Sbjct: 47 GINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLLNVFT---PQKTLEEF--- 99
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSDL 284
D+ ++ A + LD R G+ +LH IIHRDL+PS
Sbjct: 100 QDVYLVMELMDA-NLCQVIHMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPS-- 153
Query: 285 YVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 344
NI+ LK+ DFG+++ T + +T + Y APEV Y
Sbjct: 154 ---------NIVVKSDCTLKILDFGLAR--TASTNFMMTPYVVTRYYRAPEVILGMGYKE 202
Query: 345 KVDVFSFALILQEMIEGCPPF 365
VD++S I+ E+++G F
Sbjct: 203 NVDIWSVGCIMGELVKGSVIF 223
>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s
pdb|2XZT|H Chain H, Caspase-3 In Complex With Darpin-3.4_i78s
Length = 136
Score = 63.9 bits (154), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 59/102 (57%), Gaps = 5/102 (4%)
Query: 26 AELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGF 85
A++N +DD G + P L A +E ++ LL G DVN D RT LH+AA G
Sbjct: 38 ADVNAMDDAG--VTP---LHLAAKRGHLEIVEVLLKHGADVNASDSWGRTPLHLAATVGH 92
Query: 86 TEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEK 127
E+V +LLE GADV+ +D++G T +I N ++ ++L+K
Sbjct: 93 LEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 60.5 bits (145), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 48/75 (64%)
Query: 56 IKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIY 115
++ L+ +G DVN D T LH+AA +G E+V +LL+ GADV+ D WG TPL A
Sbjct: 30 VRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWGRTPLHLAAT 89
Query: 116 YKNHEVIKLLEKHGA 130
+ E++++L ++GA
Sbjct: 90 VGHLEIVEVLLEYGA 104
Score = 34.7 bits (78), Expect = 0.12, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 84 GFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
G + V +L+ GADV+ D G TPL A + E++++L KHGA
Sbjct: 25 GQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGA 71
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 89/193 (46%), Gaps = 26/193 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G +VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
+L DL +K + L I RG+ Y+H IIHRDL+PS+L V
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAV--- 158
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDV 348
++ LK+ DF +++ D +T + Y APE+ N Y+ VD+
Sbjct: 159 --------NEDCELKILDFYLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 206
Query: 349 FSFALILQEMIEG 361
+S I+ E++ G
Sbjct: 207 WSVGCIMAELLTG 219
>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex
pdb|2V4H|D Chain D, Nemo Cc2-Lz Domain - 1d5 Darpin Complex
Length = 136
Score = 63.5 bits (153), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 63/117 (53%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRD 70
LL+ + D E + NG D + + K L A+ +E ++ LL G DVN D
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHD 77
Query: 71 IDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEK 127
D T LH+AA G E+V +LL+ GADV+ +D++G T +I N ++ ++L+K
Sbjct: 78 NDGSTPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 58.9 bits (141), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 47/75 (62%)
Query: 56 IKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIY 115
++ L+ +G DVN D T LH+AA E+V +LL+ GADV+ D GSTPL A
Sbjct: 30 VRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDGSTPLHLAAL 89
Query: 116 YKNHEVIKLLEKHGA 130
+ + E++++L KHGA
Sbjct: 90 FGHLEIVEVLLKHGA 104
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 225 MMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
++IV E L G+L + ++ +G A A I + YLH + I HRD++P
Sbjct: 134 LLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHS---INIAHRDVKPE 190
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY 342
+L Y N + LK+ DFG +K T LT + YVAPEV E+Y
Sbjct: 191 NLL--YTSKRPNAI------LKLTDFGFAKETT--SHNSLTTPCYTPYYVAPEVLGPEKY 240
Query: 343 DTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQR 382
D D +S +I ++ G PPF H + R R
Sbjct: 241 DKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIR 280
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 31/226 (13%)
Query: 157 FTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L RH N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLAFRHEN 84
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 142
Query: 267 HENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRP--LTC 324
H ++HRDL+PS N+L + + +LK+ DFG++++ D LT
Sbjct: 143 HSAN---VLHRDLKPS-----------NLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 188
Query: 325 QDTSCRYVAPEVFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 369
+ Y APE+ N + Y +D++S IL EM+ P F KH
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 34/224 (15%)
Query: 200 ELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEY-LPKGDLRAFLKRKGALKPSTAVRFA 256
E+ LL+K+ V++ L + +++ E P DL F+ +GAL+ A F
Sbjct: 57 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 116
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRD-DSGNLKVADFGVSKLLT 315
+ + + H ++HRD++ D NIL D + G LK+ DFG LL
Sbjct: 117 WQVLEAVRHCHN---CGVLHRDIK-----------DENILIDLNRGELKLIDFGSGALL- 161
Query: 316 VKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTMKHDNEVP 374
+D T D + Y PE + Y + V+S ++L +M+ G PF +HD E+
Sbjct: 162 --KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 217
Query: 375 KAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 417
RQR + + LI C +P+ RPTF +I
Sbjct: 218 GGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFEEI 252
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 116/260 (44%), Gaps = 24/260 (9%)
Query: 162 EITKGTF-----ILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
E+ KG F + G + A K + + +S D + R E + + ++HPN+V+
Sbjct: 11 ELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLER-EARICRLLKHPNIVRLH 69
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
++++ +V + + G+L + + + A I +N+ H N I+H
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG---IVH 126
Query: 277 RDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEV 336
RDL+P +L +A + +K+ADFG++ + + T Y++PEV
Sbjct: 127 RDLKPENLLLAS--------KSKGAAVKLADFGLAIEVQGDQQAWFGFAGTP-GYLSPEV 177
Query: 337 FKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLY---A 393
+ + Y VD+++ +IL ++ G PPF D + + Y + + P+ +
Sbjct: 178 LRKDPYGKPVDMWACGVILYILLVGYPPFW---DEDQHRLYQQIKAGAYDFPSPEWDTVT 234
Query: 394 RGLKELIEECWNEKPAKRPT 413
K+LI + PAKR T
Sbjct: 235 PEAKDLINKMLTINPAKRIT 254
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 116/260 (44%), Gaps = 24/260 (9%)
Query: 162 EITKGTF-----ILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
E+ KG F + G + A K + + +S D + R E + + ++HPN+V+
Sbjct: 11 ELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLER-EARICRLLKHPNIVRLH 69
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
++++ +V + + G+L + + + A I +N+ H N I+H
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG---IVH 126
Query: 277 RDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEV 336
RDL+P +L +A + +K+ADFG++ + + T Y++PEV
Sbjct: 127 RDLKPENLLLAS--------KSKGAAVKLADFGLAIEVQGDQQAWFGFAGTP-GYLSPEV 177
Query: 337 FKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLY---A 393
+ + Y VD+++ +IL ++ G PPF D + + Y + + P+ +
Sbjct: 178 LRKDPYGKPVDMWACGVILYILLVGYPPFW---DEDQHRLYQQIKAGAYDFPSPEWDTVT 234
Query: 394 RGLKELIEECWNEKPAKRPT 413
K+LI + PAKR T
Sbjct: 235 PEAKDLINKMLTINPAKRIT 254
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 23/198 (11%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTE-YLP 233
G +VA+KKL S+ RA+R EL LL+ ++H NV+ L T +S + + YL
Sbjct: 67 GEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 125
Query: 234 KGDLRAFLKRKGALKPS--TAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
++ L++ ++ S + +G+ Y+H ++HRDL+P +L V
Sbjct: 126 MPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAV----- 177
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFS 350
++ LK+ DFG+++ D +T + Y APEV + Y+ VD++S
Sbjct: 178 ------NEDCELKILDFGLAR----HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWS 227
Query: 351 FALILQEMIEGCPPFTMK 368
I+ EM+ G F K
Sbjct: 228 VGCIMAEMLTGKTLFKGK 245
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 20/187 (10%)
Query: 188 ISDDDR---VRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRK 244
+ DDD A R E+ LL++++H N+V+ + + +V E+ + + F
Sbjct: 37 LDDDDEGVPSSALR-EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN 95
Query: 245 GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLK 304
G L P F + +G+ + H ++HRDL+P +N+L + +G LK
Sbjct: 96 GDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKP-----------QNLLINRNGELK 141
Query: 305 VADFGVSKLLTVKEDRPLTCQDTSCRYVAPEV-FKNEEYDTKVDVFSFALILQEMIEGCP 363
+A+FG+++ + R + + + Y P+V F + Y T +D++S I E+
Sbjct: 142 LANFGLARAFGIPV-RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGR 200
Query: 364 PFTMKHD 370
P +D
Sbjct: 201 PLFPGND 207
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 123/275 (44%), Gaps = 30/275 (10%)
Query: 151 DPHELDFTNSVEITKG-TFILAFWR----GIQVAVKKLGEEVISDDDRVRAFRDELALLQ 205
DP L + V+I +G T I+ R G QVAVK + + R +E+ +++
Sbjct: 42 DPRLL-LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMD---LRKQQRRELLFNEVVIMR 97
Query: 206 KIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNY 265
+H NVV+ + + ++ E+L G L + + L + + + Y
Sbjct: 98 DYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV-RLNEEQIATVCEAVLQALAY 156
Query: 266 LHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ 325
LH +IHRD++ SD +IL G +K++DFG + +D P
Sbjct: 157 LHAQG---VIHRDIK-SD----------SILLTLDGRVKLSDFGFCA--QISKDVPKRKX 200
Query: 326 DTSCRY-VAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPP 384
Y +APEV Y T+VD++S +++ EM++G PP+ D+ V R PP
Sbjct: 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYF--SDSPVQAMKRLRDSPP 258
Query: 385 FKAP-AKLYARGLKELIEECWNEKPAKRPTFRQII 418
K + + L++ +E P +R T ++++
Sbjct: 259 PKLKNSHKVSPVLRDFLERMLVRDPQERATAQELL 293
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 34/198 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFT---PQKSLEEF---QDV 104
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSDLYVA 287
++ A S ++ LD R G+ +LH IIHRDL+PS
Sbjct: 105 YIVMELMDA-NLSQVIQMELDHERMSYLLYQMLVGIKHLHS---AGIIHRDLKPS----- 155
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVD 347
NI+ LK+ DFG+++ T +T + Y APEV Y VD
Sbjct: 156 ------NIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 207
Query: 348 VFSFALILQEMIEGCPPF 365
++S +I+ EMI+G F
Sbjct: 208 IWSVGVIMGEMIKGGVLF 225
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 35/181 (19%)
Query: 197 FRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR-----KGALKPST 251
F +E ++ P VVQ A + +V EY+P GDL + K A +
Sbjct: 122 FWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTA 181
Query: 252 AVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVS 311
V ALD M +IHRD++P N+L D G+LK+ADFG
Sbjct: 182 EVVLALDAIHSMG---------LIHRDVKPD-----------NMLLDKHGHLKLADFGTC 221
Query: 312 KLLTVKEDRPLTCQDTSCR---YVAPEVFKNEE----YDTKVDVFSFALILQEMIEGCPP 364
+ + E + C DT+ Y++PEV K++ Y + D +S + L EM+ G P
Sbjct: 222 --MKMDETGMVHC-DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
Query: 365 F 365
F
Sbjct: 279 F 279
>pdb|3UTM|A Chain A, Crystal Structure Of A Mouse Tankyrase-Axin Complex
pdb|3UTM|B Chain B, Crystal Structure Of A Mouse Tankyrase-Axin Complex
Length = 351
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 58/137 (42%), Gaps = 12/137 (8%)
Query: 28 LNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTE 87
+N DG + P L A V ++ LL G DV+ +D LH A G E
Sbjct: 49 VNCHASDGRKSTP---LHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYE 105
Query: 88 VVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGAKPLMAPMHVKHA----- 142
V LLL+ GA V+ D W TPL +A EV LL HGA P + H K A
Sbjct: 106 VTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAP 165
Query: 143 ----REVPEYEIDPHEL 155
RE YE H L
Sbjct: 166 TPELRERLTYEFKGHSL 182
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 36 EEIKPEFR---LMFLANERDVEGIKELLDSGIDVNFRD-IDNRTALHVAACQGF---TEV 88
E + EF+ L+ A E D+ +K+ L I +NF+ + TALH A +V
Sbjct: 171 ERLTYEFKGHSLLQAAREADLAKVKKTLALEI-INFKQPQSHETALHCAVASLHPKRKQV 229
Query: 89 VSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGAK 131
LLL +GA+V+ K++ TPL A +++V+++L KHGAK
Sbjct: 230 AELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAK 272
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%)
Query: 59 LLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKN 118
LL G +VN ++ D T LHVAA + +V+ +L + GA ++ D G T L A +
Sbjct: 233 LLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGH 292
Query: 119 HEVIKLLEKHGAKP 132
+ +LL +G+ P
Sbjct: 293 LQTCRLLLSYGSDP 306
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 34/198 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFT---PQKSLEEF---QDV 104
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSDLYVA 287
++ A S ++ LD R G+ +LH IIHRDL+PS
Sbjct: 105 YIVMELMDA-NLSQVIQMELDHERMSYLLYQMLVGIKHLHS---AGIIHRDLKPS----- 155
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVD 347
NI+ LK+ DFG+++ T +T + Y APEV Y VD
Sbjct: 156 ------NIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 207
Query: 348 VFSFALILQEMIEGCPPF 365
++S +I+ EMI+G F
Sbjct: 208 IWSVGVIMGEMIKGGVLF 225
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G+++A K + + D + V+ +E++++ ++ H N++Q A + +++V EY+
Sbjct: 114 GLKLAAKIIKTRGMKDKEEVK---NEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG 170
Query: 235 GDL-RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDR 293
G+L + L + F I G+ ++H+ + I+H DL+P ++
Sbjct: 171 GELFDRIIDESYNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILC------- 220
Query: 294 NILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
+ D+ +K+ DFG+++ +E L + ++APEV + D++S +
Sbjct: 221 --VNRDAKQIKIIDFGLARRYKPRE--KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGV 276
Query: 354 ILQEMIEGCPPFTMKHDNEV 373
I ++ G PF +D E
Sbjct: 277 IAYMLLSGLSPFLGDNDAET 296
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 16/143 (11%)
Query: 225 MMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
++I+ E + G+L + ++ +G A A DI + +LH + I HRD++P
Sbjct: 82 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPE 138
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY 342
+L + D LK+ DFG +K T L + YVAPEV E+Y
Sbjct: 139 NLLYTSKEKD--------AVLKLTDFGFAKETT---QNALQTPCYTPYYVAPEVLGPEKY 187
Query: 343 DTKVDVFSFALILQEMIEGCPPF 365
D D++S +I+ ++ G PPF
Sbjct: 188 DKSCDMWSLGVIMYILLCGFPPF 210
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 16/143 (11%)
Query: 225 MMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
++I+ E + G+L + ++ +G A A DI + +LH + I HRD++P
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPE 157
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY 342
+L + D LK+ DFG +K T L + YVAPEV E+Y
Sbjct: 158 NLLYTSKEKD--------AVLKLTDFGFAKETT---QNALQTPCYTPYYVAPEVLGPEKY 206
Query: 343 DTKVDVFSFALILQEMIEGCPPF 365
D D++S +I+ ++ G PPF
Sbjct: 207 DKSCDMWSLGVIMYILLCGFPPF 229
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 87/198 (43%), Gaps = 34/198 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFT---PQKSLEEF---QDV 104
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSDLYVA 287
++ A S ++ LD R G+ +LH IIHRDL+PS
Sbjct: 105 YIVMELMDA-NLSQVIQMELDHERMSYLLYQMLVGIKHLHS---AGIIHRDLKPS----- 155
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVD 347
NI+ LK+ DFG+++ T +T + Y APEV Y VD
Sbjct: 156 ------NIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 207
Query: 348 VFSFALILQEMIEGCPPF 365
++S I+ EMI+G F
Sbjct: 208 IWSVGCIMGEMIKGGVLF 225
>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat
Protein (Darpin)
pdb|2P2C|Q Chain Q, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat
Protein (Darpin)
pdb|2P2C|R Chain R, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat
Protein (Darpin)
pdb|2P2C|S Chain S, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat
Protein (Darpin)
pdb|2P2C|T Chain T, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat
Protein (Darpin)
pdb|2P2C|U Chain U, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat
Protein (Darpin)
Length = 169
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 63/120 (52%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRD 70
LL+ + D E + NG D + + L A +E ++ LL G DVN D
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWD 77
Query: 71 IDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
T LH+AA G E+V +LL+ GADV+ KD G TPL A Y + E++++L K+GA
Sbjct: 78 NYGATPLHLAADNGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGA 137
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%)
Query: 44 LMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKD 103
L A+ +E ++ LL G DVN +D + T LH+AA G E+V +LL+ GADV+ +D
Sbjct: 84 LHLAADNGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQD 143
Query: 104 RWGSTPLGDAIYYKNHEVIKLLEK 127
++G T +I N ++ ++L+K
Sbjct: 144 KFGKTAFDISIDNGNEDLAEILQK 167
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 87/198 (43%), Gaps = 34/198 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFT---PQKSLEEF---QDV 104
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSDLYVA 287
++ A S ++ LD R G+ +LH IIHRDL+PS
Sbjct: 105 YIVMELMDA-NLSQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPS----- 155
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVD 347
NI+ LK+ DFG+++ T +T + Y APEV Y VD
Sbjct: 156 ------NIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 207
Query: 348 VFSFALILQEMIEGCPPF 365
++S I+ EMI+G F
Sbjct: 208 IWSVGCIMGEMIKGGVLF 225
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 111/260 (42%), Gaps = 50/260 (19%)
Query: 191 DDRVRAFRDELALLQKIRHPNVVQF-------------LGAVTQSSPMMIVTEYLPKGDL 237
++++ E+ LL + H VV++ + AV + S + I EY G L
Sbjct: 43 EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTL 102
Query: 238 RAFLKRKGALKPSTAV-RFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
+ + + R I ++Y+H IIHRDL+P ++++
Sbjct: 103 YDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFI---------- 149
Query: 297 RDDSGNLKVADFGVSK-----LLTVKEDRP--------LTCQDTSCRYVAPEVFKNE-EY 342
D+S N+K+ DFG++K L +K D LT + YVA EV Y
Sbjct: 150 -DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHY 208
Query: 343 DTKVDVFSFALILQEMIEGCPPFT--MKHDNEVPKAYAAR-QRPPFKAPAKLYARGLKEL 399
+ K+D++S +I EMI PF+ M+ N + K + + PP K+ K++
Sbjct: 209 NEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVE--KKI 263
Query: 400 IEECWNEKPAKRPTFRQIIT 419
I + P KRP R ++
Sbjct: 264 IRLLIDHDPNKRPGARTLLN 283
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 87/198 (43%), Gaps = 34/198 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFT---PQKSLEEF---QDV 104
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSDLYVA 287
++ A S ++ LD R G+ +LH IIHRDL+PS
Sbjct: 105 YIVMELMDA-NLSQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPS----- 155
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVD 347
NI+ LK+ DFG+++ T +T + Y APEV Y VD
Sbjct: 156 ------NIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 207
Query: 348 VFSFALILQEMIEGCPPF 365
++S I+ EMI+G F
Sbjct: 208 IWSVGCIMGEMIKGGVLF 225
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 116/268 (43%), Gaps = 28/268 (10%)
Query: 156 DFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVV 213
+F E + G +A R G VAVKK+ + R +E+ +++ +H NVV
Sbjct: 28 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVV 84
Query: 214 QFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVP 273
+ + + +V E+L G L + + A L + + ++ LH
Sbjct: 85 EMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-VCLAVLQALSVLHAQG--- 140
Query: 274 IIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVA 333
+IHRD++ SD +IL G +K++DFG ++ + R T ++A
Sbjct: 141 VIHRDIK-SD----------SILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY-WMA 188
Query: 334 PEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQR---PPFKAPAK 390
PE+ Y +VD++S +++ EM++G PP+ NE P R PP
Sbjct: 189 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF----NEPPLKAMKMIRDNLPPRLKNLH 244
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQII 418
+ LK ++ PA+R T +++
Sbjct: 245 KVSPSLKGFLDRLLVRDPAQRATAAELL 272
>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|D Chain D, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 136
Score = 61.2 bits (147), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 49/75 (65%)
Query: 56 IKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIY 115
++ L+ +G DVN D D T LH+AA G E+V +LL+ GADV+ +D +G TPL A
Sbjct: 30 VRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAI 89
Query: 116 YKNHEVIKLLEKHGA 130
+ E++++L KHGA
Sbjct: 90 RGHLEIVEVLLKHGA 104
Score = 60.5 bits (145), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 26 AELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGF 85
A++N LD+DG + P L A +E ++ LL G DVN D T LH+AA +G
Sbjct: 38 ADVNALDEDG--LTP---LHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAIRGH 92
Query: 86 TEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEK 127
E+V +LL+ GADV+ +D++G T +I N ++ ++L+K
Sbjct: 93 LEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 24/194 (12%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G QVA+KK+ + R R EL +L+ +H N++ + + P + V
Sbjct: 79 GQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVV 137
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
L + DL + L F + RG+ Y+H + +IHRDL+PS
Sbjct: 138 LDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPS------- 187
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVK--EDRPLTCQDTSCR-YVAPEVFKN-EEYDTK 345
N+L +++ LK+ DFG+++ L E + + + R Y APE+ + EY
Sbjct: 188 ----NLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQA 243
Query: 346 VDVFSFALILQEMI 359
+D++S I EM+
Sbjct: 244 IDLWSVGCIFGEML 257
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 127/299 (42%), Gaps = 35/299 (11%)
Query: 132 PLMAPMHVKHA--REVPEYEIDPHE----LD-FTNSVEITKGTFILAFWR--GIQVAVKK 182
P P V H R + +DP + LD F E + G +A R G VAVKK
Sbjct: 2 PQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKK 61
Query: 183 LGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK 242
+ + R +E+ +++ +H NVV+ + + +V E+L G L +
Sbjct: 62 MD---LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT 118
Query: 243 RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGN 302
+ A L + + ++ LH +IHRD++ SD +IL G
Sbjct: 119 HTRMNEEQIAA-VCLAVLQALSVLHAQG---VIHRDIK-SD----------SILLTHDGR 163
Query: 303 LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGC 362
+K++DFG ++ + R T ++APE+ Y +VD++S +++ EM++G
Sbjct: 164 VKLSDFGFCAQVSKEVPRRKXLVGTPY-WMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 222
Query: 363 PPFTMKHDNEVPKAYAARQR---PPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
PP+ NE P R PP + LK ++ PA+R T +++
Sbjct: 223 PPYF----NEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 277
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 116/268 (43%), Gaps = 28/268 (10%)
Query: 156 DFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVV 213
+F E + G +A R G VAVKK+ + R +E+ +++ +H NVV
Sbjct: 24 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVV 80
Query: 214 QFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVP 273
+ + + +V E+L G L + + A L + + ++ LH
Sbjct: 81 EMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-VCLAVLQALSVLHAQG--- 136
Query: 274 IIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVA 333
+IHRD++ SD +IL G +K++DFG ++ + R T ++A
Sbjct: 137 VIHRDIK-SD----------SILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY-WMA 184
Query: 334 PEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQR---PPFKAPAK 390
PE+ Y +VD++S +++ EM++G PP+ NE P R PP
Sbjct: 185 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF----NEPPLKAMKMIRDNLPPRLKNLH 240
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQII 418
+ LK ++ PA+R T +++
Sbjct: 241 KVSPSLKGFLDRLLVRDPAQRATAAELL 268
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 175 GIQVAVKKLGEEVISDDDRV--RAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYL 232
G VA+KK E S+DD V + E+ +L++++HPN+V L + + +V EY
Sbjct: 28 GQIVAIKKFLE---SEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYC 84
Query: 233 PKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQND 292
L + + + + +N+ H++ IHRD++P
Sbjct: 85 DHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPE---------- 131
Query: 293 RNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR-YVAPEVF-KNEEYDTKVDVFS 350
NIL +K+ DFG ++LLT D + + R Y +PE+ + +Y VDV++
Sbjct: 132 -NILITKHSVIKLCDFGFARLLTGPSD--YYDDEVATRWYRSPELLVGDTQYGPPVDVWA 188
Query: 351 FALILQEMIEGCPPFTMKHDNEVPKAYAARQ 381
+ E++ G P + K D V + Y R+
Sbjct: 189 IGCVFAELLSGVPLWPGKSD--VDQLYLIRK 217
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 106/213 (49%), Gaps = 35/213 (16%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQF--------------LGAVTQS 222
+VA+KK+ V++D V+ E+ +++++ H N+V+ +G++T+
Sbjct: 38 RVAIKKI---VLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTEL 94
Query: 223 SPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+ + IV EY+ + DL L+ +G L A F + RG+ Y+H ++HRDL+P+
Sbjct: 95 NSVYIVQEYM-ETDLANVLE-QGPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPA 149
Query: 283 DLYVAYWQNDRNILRDDSGNLKVADFGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKN- 339
+L++ N +++ LK+ DFG+++++ L+ + Y +P + +
Sbjct: 150 NLFI----NTEDLV------LKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSP 199
Query: 340 EEYDTKVDVFSFALILQEMIEGCPPFTMKHDNE 372
Y +D+++ I EM+ G F H+ E
Sbjct: 200 NNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE 232
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 24/194 (12%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G QVA+KK+ + R R EL +L+ +H N++ + + P + V
Sbjct: 80 GQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVV 138
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
L + DL + L F + RG+ Y+H + +IHRDL+PS
Sbjct: 139 LDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPS------- 188
Query: 290 QNDRNILRDDSGNLKVADFGVSKLLTVK--EDRPLTCQDTSCR-YVAPEVFKN-EEYDTK 345
N+L +++ LK+ DFG+++ L E + + + R Y APE+ + EY
Sbjct: 189 ----NLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQA 244
Query: 346 VDVFSFALILQEMI 359
+D++S I EM+
Sbjct: 245 IDLWSVGCIFGEML 258
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 116/268 (43%), Gaps = 28/268 (10%)
Query: 156 DFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVV 213
+F E + G +A R G VAVKK+ + R +E+ +++ +H NVV
Sbjct: 78 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVV 134
Query: 214 QFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVP 273
+ + + +V E+L G L + + A L + + ++ LH
Sbjct: 135 EMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-VCLAVLQALSVLHAQG--- 190
Query: 274 IIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVA 333
+IHRD++ SD +IL G +K++DFG ++ + R T ++A
Sbjct: 191 VIHRDIK-SD----------SILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY-WMA 238
Query: 334 PEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQR---PPFKAPAK 390
PE+ Y +VD++S +++ EM++G PP+ NE P R PP
Sbjct: 239 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF----NEPPLKAMKMIRDNLPPRLKNLH 294
Query: 391 LYARGLKELIEECWNEKPAKRPTFRQII 418
+ LK ++ PA+R T +++
Sbjct: 295 KVSPSLKGFLDRLLVRDPAQRATAAELL 322
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 30/211 (14%)
Query: 170 LAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVT 229
++ G + AVK + E + R R FR+ L Q + N+++ + + +V
Sbjct: 33 VSLQNGKEYAVKII--EKQAGHSRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVF 90
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYW 289
E L G + A ++++ A R D+A +++LH I HRDL+P
Sbjct: 91 EKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKG---IAHRDLKP-------- 139
Query: 290 QNDRNILRDDS---GNLKVADFGVSKLLTVKED-RPLTCQD-----TSCRYVAP---EVF 337
NIL + +K+ DF + + + P+T + S Y+AP EVF
Sbjct: 140 ---ENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVF 196
Query: 338 KNEE--YDTKVDVFSFALILQEMIEGCPPFT 366
++ YD + D++S ++L M+ G PPF
Sbjct: 197 TDQATFYDKRCDLWSLGVVLYIMLSGYPPFV 227
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 110/253 (43%), Gaps = 28/253 (11%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G +AVK++ V S + + R D ++ + P V F GA+ + + I E +
Sbjct: 76 GQIMAVKRIRATVNSQEQK-RLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM-D 133
Query: 235 GDLRAFLKR---KGALKPSTAV-RFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQ 290
L F K+ KG P + + A+ I + + +LH + +IHRD++PS
Sbjct: 134 TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPS-------- 183
Query: 291 NDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR-YVAPEVFKNE----EYDTK 345
N+L + G +K+ DFG+S L D D C+ Y+APE E Y K
Sbjct: 184 ---NVLINALGQVKMCDFGISGYLV---DSVAKTIDAGCKPYMAPERINPELNQKGYSVK 237
Query: 346 VDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWN 405
D++S + + E+ P+ + + P + PA ++ + +C
Sbjct: 238 SDIWSLGITMIELAILRFPYD-SWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLK 296
Query: 406 EKPAKRPTFRQII 418
+ +RPT+ +++
Sbjct: 297 KNSKERPTYPELM 309
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 34/194 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFT---PQKSLEEF---QDV 104
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSDLYVA 287
++ A S ++ LD R G+ +LH IIHRDL+PS
Sbjct: 105 YIVMELMDA-NLSQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPS----- 155
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVD 347
NI+ LK+ DFG+++ T +T + Y APEV Y VD
Sbjct: 156 ------NIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 207
Query: 348 VFSFALILQEMIEG 361
++S I+ EMI+G
Sbjct: 208 IWSVGCIMGEMIKG 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 26/190 (13%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM------MIVTEY 231
VA+KKL + RA+R EL L++ + H N++ L T + IV E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME- 109
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
L +L ++ + L + G+ +LH IIHRDL+PS
Sbjct: 110 LMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPS--------- 155
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 351
NI+ LK+ DFG+++ T +T + + Y APEV Y VD++S
Sbjct: 156 --NIVVKSDCTLKILDFGLAR--TAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSV 211
Query: 352 ALILQEMIEG 361
I+ EMI+G
Sbjct: 212 GCIMGEMIKG 221
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 28/243 (11%)
Query: 132 PLMAPMHVKHA--REVPEYEIDPHE----LD-FTNSVEITKGTFILAFWR--GIQVAVKK 182
P P V H R + +DP + LD F E + G +A R G VAVKK
Sbjct: 124 PQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKK 183
Query: 183 LGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK 242
+ + R +E+ +++ +H NVV+ + + +V E+L G L +
Sbjct: 184 MD---LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT 240
Query: 243 RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGN 302
+ A L + + ++ LH +IHRD++ SD +IL G
Sbjct: 241 HTRMNEEQIAA-VCLAVLQALSVLHAQG---VIHRDIK-SD----------SILLTHDGR 285
Query: 303 LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGC 362
+K++DFG ++ + R T ++APE+ Y +VD++S +++ EM++G
Sbjct: 286 VKLSDFGFCAQVSKEVPRRKXLVGTPY-WMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 344
Query: 363 PPF 365
PP+
Sbjct: 345 PPY 347
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 113/260 (43%), Gaps = 49/260 (18%)
Query: 207 IRHPNVVQFLGAVTQSS----PMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARG 262
++H N++QF+ A + S + ++T + KG L +LK + + A ++RG
Sbjct: 66 MKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLK-GNIITWNELCHVAETMSRG 124
Query: 263 MNYLHENKPV--------PIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVS-KL 313
++YLHE+ P I HRD + +N+L +ADFG++ +
Sbjct: 125 LSYLHEDVPWCRGEGHKPSIAHRDFK-----------SKNVLLKSDLTAVLADFGLAVRF 173
Query: 314 LTVKEDRPLTCQDTSCRYVAPEVFK---NEEYDT--KVDVFSFALILQEMIEGCP----- 363
K Q + RY+APEV + N + D ++D+++ L+L E++ C
Sbjct: 174 EPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGP 233
Query: 364 ------PF---TMKHDN--EVPKAYAARQRPPFKAPAKLYARGLKEL---IEECWNEKPA 409
PF +H + E+ + ++ P L GL +L IEECW+
Sbjct: 234 VDEYMLPFEEEIGQHPSLEELQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDHDAE 293
Query: 410 KRPTFRQIITRLESINNSIN 429
R + + R+ I S+N
Sbjct: 294 ARLSAGCVEERVSLIRRSVN 313
>pdb|3TWR|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human 3bp2
pdb|3TWR|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human 3bp2
pdb|3TWR|C Chain C, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human 3bp2
pdb|3TWR|D Chain D, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human 3bp2
pdb|3TWS|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Terf1 (Chimeric Peptide)
pdb|3TWS|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Terf1 (Chimeric Peptide)
pdb|3TWS|C Chain C, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Terf1 (Chimeric Peptide)
pdb|3TWS|D Chain D, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Terf1 (Chimeric Peptide)
pdb|3TWT|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Mcl1 (Chimeric Peptide)
pdb|3TWT|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Mcl1 (Chimeric Peptide)
pdb|3TWT|C Chain C, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Mcl1 (Chimeric Peptide)
pdb|3TWT|D Chain D, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Mcl1 (Chimeric Peptide)
pdb|3TWV|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Numa1 (Chimeric Peptide)
pdb|3TWV|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Numa1 (Chimeric Peptide)
pdb|3TWV|C Chain C, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Numa1 (Chimeric Peptide)
pdb|3TWV|D Chain D, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Numa1 (Chimeric Peptide)
pdb|3TWW|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Lnpep (Chimeric Peptide)
pdb|3TWW|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Lnpep (Chimeric Peptide)
pdb|3TWX|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Fnbp1 (Chimeric Peptide)
pdb|3TWX|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Fnbp1 (Chimeric Peptide)
Length = 165
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 27 ELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFT 86
+N D +G + P L F A V ++ LL G DV+ +D LH A G
Sbjct: 32 SVNCRDIEGRQSTP---LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHY 88
Query: 87 EVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGAKP 132
EV LL++ GA V+ D W TPL +A +E+ KLL +HGA P
Sbjct: 89 EVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADP 134
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 59 LLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPL 110
L+ G VN D+ T LH AA +G E+ LLL+ GAD K+R G+TPL
Sbjct: 94 LVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPL 145
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 123/294 (41%), Gaps = 24/294 (8%)
Query: 162 EITKGTF-----ILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
+I KG F + G + A K + + +S D + R E + + ++H N+V+
Sbjct: 11 DIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLER-EARICRLLKHSNIVRLH 69
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
++++ +V + + G+L + + + A I + + H+ + ++H
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ---MGVVH 126
Query: 277 RDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEV 336
RDL+P +L +A + +K+ADFG++ + + T Y++PEV
Sbjct: 127 RDLKPENLLLAS--------KCKGAAVKLADFGLAIEVQGDQQAWFGFAGTP-GYLSPEV 177
Query: 337 FKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLY---A 393
+ E Y VD+++ +IL ++ G PPF D + K Y + + P+ +
Sbjct: 178 LRKEAYGKPVDIWACGVILYILLVGYPPFW---DEDQHKLYQQIKAGAYDFPSPEWDTVT 234
Query: 394 RGLKELIEECWNEKPAKRPTFRQIITRLESINNSINHKRRWKIRTMKCFHNLEA 447
K LI + PAKR T + + S + T++C A
Sbjct: 235 PEAKNLINQMLTINPAKRITAHEALKHPWVCQRSTVASMMHRQETVECLKKFNA 288
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 111/253 (43%), Gaps = 28/253 (11%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G +AVK++ V S + + R D ++ + P V F GA+ + + I E L
Sbjct: 32 GQIMAVKRIRATVNSQEQK-RLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME-LMD 89
Query: 235 GDLRAFLKR---KGALKPSTAV-RFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQ 290
L F K+ KG P + + A+ I + + +LH + +IHRD++PS
Sbjct: 90 TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPS-------- 139
Query: 291 NDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR-YVAPEVFKNE----EYDTK 345
N+L + G +K+ DFG+S L + + D C+ Y+APE E Y K
Sbjct: 140 ---NVLINALGQVKMCDFGISGYLVDDVAKDI---DAGCKPYMAPERINPELNQKGYSVK 193
Query: 346 VDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWN 405
D++S + + E+ P+ + + P + PA ++ + +C
Sbjct: 194 SDIWSLGITMIELAILRFPYD-SWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLK 252
Query: 406 EKPAKRPTFRQII 418
+ +RPT+ +++
Sbjct: 253 KNSKERPTYPELM 265
>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb:
Plasticity Of The Interface
pdb|3NOC|E Chain E, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb:
Plasticity Of The Interface
Length = 169
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 56 IKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIY 115
++ L+ +G DVN RD T LH+AA G E+V +LL+ GADV+ KD G TPL A
Sbjct: 30 VRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLGVTPLHLAAR 89
Query: 116 YKNHEVIKLLEKHGA 130
+ E++++L K+GA
Sbjct: 90 RGHLEIVEVLLKNGA 104
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 65/120 (54%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRD 70
LL+ + D E + NG D + + L A+ +E ++ LL +G DVN +D
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKD 77
Query: 71 IDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
T LH+AA +G E+V +LL+ GADV+ D G TPL A + E++++L K+GA
Sbjct: 78 SLGVTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGA 137
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%)
Query: 29 NGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEV 88
NG D + ++ L A +E ++ LL +G DVN D T LH+AA +G E+
Sbjct: 69 NGADVNAKDSLGVTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEI 128
Query: 89 VSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEK 127
V +LL+ GADV+ +D++G T +I N ++ ++L+K
Sbjct: 129 VEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167
>pdb|2V5Q|C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|D Chain D, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 167
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%)
Query: 56 IKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIY 115
++ L+ +G DVN D T LH+AA G E+V +LL+ GADVD D +G TPL A
Sbjct: 30 VRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYGFTPLHLAAM 89
Query: 116 YKNHEVIKLLEKHGA 130
+ E++++L K+GA
Sbjct: 90 TGHLEIVEVLLKYGA 104
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
Query: 26 AELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGF 85
A++N +D+ G + P L A +E ++ LL G DV+ D+ T LH+AA G
Sbjct: 38 ADVNAVDNTG--LTP---LHLAAVSGHLEIVEVLLKHGADVDAADVYGFTPLHLAAMTGH 92
Query: 86 TEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
E+V +LL+ GADV+ D GSTPL A + E++++L K+GA
Sbjct: 93 LEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGA 137
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%)
Query: 29 NGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEV 88
+G D D ++ L A +E ++ LL G DVN D+ T LH+AA +G E+
Sbjct: 69 HGADVDAADVYGFTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEI 128
Query: 89 VSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIK 123
V +LL+ GADV+ +D++G T +I N ++ K
Sbjct: 129 VEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAK 163
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 83/190 (43%), Gaps = 26/190 (13%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM------MIVTEY 231
VA+KKL + RA+R EL L++ + H N++ L T + IV E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME- 109
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
L +L ++ + L + G+ +LH IIHRDL+PS
Sbjct: 110 LMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPS--------- 155
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 351
NI+ LK+ DFG+++ T +T + Y APEV Y VD++S
Sbjct: 156 --NIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 211
Query: 352 ALILQEMIEG 361
I+ EMI+G
Sbjct: 212 GCIMGEMIKG 221
>pdb|3TWU|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Mcl1
Length = 167
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 27 ELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFT 86
+N D +G + P L F A V ++ LL G DV+ +D LH A G
Sbjct: 34 SVNCRDIEGRQSTP---LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHY 90
Query: 87 EVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGAKP 132
EV LL++ GA V+ D W TPL +A +E+ KLL +HGA P
Sbjct: 91 EVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADP 136
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 59 LLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPL 110
L+ G VN D+ T LH AA +G E+ LLL+ GAD K+R G+TPL
Sbjct: 96 LVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPL 147
>pdb|3TWQ|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo
Form)
pdb|3TWQ|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo
Form)
Length = 175
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 27 ELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFT 86
+N D +G + P L F A V ++ LL G DV+ +D LH A G
Sbjct: 36 SVNCRDIEGRQSTP---LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHY 92
Query: 87 EVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGAKP 132
EV LL++ GA V+ D W TPL +A +E+ KLL +HGA P
Sbjct: 93 EVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADP 138
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 59 LLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPL 110
L+ G VN D+ T LH AA +G E+ LLL+ GAD K+R G+TPL
Sbjct: 98 LVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPL 149
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 83/190 (43%), Gaps = 26/190 (13%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM------MIVTEY 231
VA+KKL + RA+R EL L++ + H N++ L T + IV E
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME- 110
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
L +L ++ + L + G+ +LH IIHRDL+PS
Sbjct: 111 LMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPS--------- 156
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 351
NI+ LK+ DFG+++ T +T + Y APEV Y VD++S
Sbjct: 157 --NIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 212
Query: 352 ALILQEMIEG 361
I+ EMI+G
Sbjct: 213 GCIMGEMIKG 222
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 25/224 (11%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSP--MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFAL 257
E+A+L+K+ HPNVV+ + + + + +V E + +G + K L A +
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK-PLSEDQARFYFQ 144
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVK 317
D+ +G+ YLH K IIHRD++PS+L V + G++K+ADFGVS
Sbjct: 145 DLIKGIEYLHYQK---IIHRDIKPSNLLVG-----------EDGHIKIADFGVSNEFK-G 189
Query: 318 EDRPLTCQDTSCRYVAPEVFKNEE---YDTKVDVFSFALILQEMIEGCPPFTMKHDNEVP 374
D L+ + ++APE +DV++ + L + G PF D +
Sbjct: 190 SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM---DERIM 246
Query: 375 KAYAARQRPPFKAPAKL-YARGLKELIEECWNEKPAKRPTFRQI 417
++ + + P + A LK+LI ++ P R +I
Sbjct: 247 CLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEI 290
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 83/190 (43%), Gaps = 26/190 (13%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM------MIVTEY 231
VA+KKL + RA+R EL L++ + H N++ L T + IV E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME- 109
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
L +L ++ + L + G+ +LH IIHRDL+PS
Sbjct: 110 LMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPS--------- 155
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 351
NI+ LK+ DFG+++ T +T + Y APEV Y VD++S
Sbjct: 156 --NIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 211
Query: 352 ALILQEMIEG 361
I+ EMI+G
Sbjct: 212 GCIMGEMIKG 221
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 131/293 (44%), Gaps = 38/293 (12%)
Query: 148 YEIDPHELDFTNSVEITKGTFILAFWRGIQVAVKKLGE----EVI------SDDDRVRAF 197
++I +L F S + +GTF F +G++ V G+ EV+ + + +F
Sbjct: 3 HKIRNEDLIFNES--LGQGTFTKIF-KGVRREVGDYGQLHETEVLLKVLDKAHRNYSESF 59
Query: 198 RDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR-KGALKPSTAVRFA 256
+ +++ K+ H ++V G ++V E++ G L +LK+ K + + A
Sbjct: 60 FEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVA 119
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGN---LKVADFGVSKL 313
+A M++L EN +IH ++ ++ + + DR +GN +K++D G+S
Sbjct: 120 KQLAAAMHFLEENT---LIHGNVCAKNILLIR-EEDRK-----TGNPPFIKLSDPGIS-- 168
Query: 314 LTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMIEGC-PPFTMKHDN 371
+TV P +V PE +N + + D +SF L E+ G P +
Sbjct: 169 ITV---LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ 225
Query: 372 EVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+ Y R + P AP A L LI C + +P RP+FR II L S+
Sbjct: 226 RKLQFYEDRHQLP--APK---AAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIA 260
L+L+ P +V A + + + + GDL L + G + +A +I
Sbjct: 242 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 301
Query: 261 RGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDR 320
G+ ++H +++RDL+P+ NIL D+ G+++++D G++ + K +
Sbjct: 302 LGLEHMHNRF---VVYRDLKPA-----------NILLDEHGHVRISDLGLACDFSKK--K 345
Query: 321 PLTCQDTSCRYVAPEVF-KNEEYDTKVDVFSFALILQEMIEGCPPF 365
P T Y+APEV K YD+ D FS +L +++ G PF
Sbjct: 346 PHASVGTHG-YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIA 260
L+L+ P +V A + + + + GDL L + G + +A +I
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 261 RGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDR 320
G+ ++H +++RDL+P+ NIL D+ G+++++D G++ + K +
Sbjct: 303 LGLEHMHNRF---VVYRDLKPA-----------NILLDEHGHVRISDLGLACDFSKK--K 346
Query: 321 PLTCQDTSCRYVAPEVF-KNEEYDTKVDVFSFALILQEMIEGCPPF 365
P T Y+APEV K YD+ D FS +L +++ G PF
Sbjct: 347 PHASVGTHG-YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By
Darpin Inhibitors
pdb|2J8S|E Chain E, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By
Darpin Inhibitors
pdb|4DX5|D Chain D, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
pdb|4DX5|E Chain E, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
pdb|4DX6|D Chain D, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
pdb|4DX6|E Chain E, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
pdb|4DX7|D Chain D, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
pdb|4DX7|E Chain E, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
Length = 169
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 64/120 (53%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRD 70
LL+ + D E + NG D + ++ L A +E ++ LL +G DVN D
Sbjct: 18 LLEAARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYD 77
Query: 71 IDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
T LH+AA G E+V +LL+ GADV+ KD G TPL A + E++++L K+GA
Sbjct: 78 TLGSTPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGA 137
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 58/99 (58%)
Query: 29 NGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEV 88
NG D + + L A+ +E ++ LL +G DVN +D + T LH+AA +G E+
Sbjct: 69 NGADVNAYDTLGSTPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEI 128
Query: 89 VSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEK 127
V +LL+ GADV+ +D++G T +I N ++ ++L+K
Sbjct: 129 VEVLLKYGADVNAQDKFGKTAFDISINNGNEDLAEILQK 167
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIA 260
L+L+ P +V A + + + + GDL L + G + +A +I
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 261 RGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDR 320
G+ ++H +++RDL+P+ NIL D+ G+++++D G++ + K +
Sbjct: 303 LGLEHMHNRF---VVYRDLKPA-----------NILLDEHGHVRISDLGLACDFSKK--K 346
Query: 321 PLTCQDTSCRYVAPEVF-KNEEYDTKVDVFSFALILQEMIEGCPPF 365
P T Y+APEV K YD+ D FS +L +++ G PF
Sbjct: 347 PHASVGTH-GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIA 260
L+L+ P +V A + + + + GDL L + G + +A +I
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 261 RGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDR 320
G+ ++H +++RDL+P+ NIL D+ G+++++D G++ + K +
Sbjct: 303 LGLEHMHNRF---VVYRDLKPA-----------NILLDEHGHVRISDLGLACDFSKK--K 346
Query: 321 PLTCQDTSCRYVAPEVF-KNEEYDTKVDVFSFALILQEMIEGCPPF 365
P T Y+APEV K YD+ D FS +L +++ G PF
Sbjct: 347 PHASVGTH-GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb:
Plasticity Of The Interface
pdb|3NOG|E Chain E, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb:
Plasticity Of The Interface
Length = 169
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 63/120 (52%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRD 70
LL+ + D E + NG D + + L A +E ++ LL +G DVN D
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADD 77
Query: 71 IDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
T LH+AA +G EVV +LL+ GADV+ D G TPL A + E++++L KHGA
Sbjct: 78 SLGVTPLHLAADRGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGA 137
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 29 NGLD---DDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGF 85
NG D DD + P L A+ +E ++ LL +G DVN D + T LH+AA G
Sbjct: 69 NGADVNADDSLGVTP---LHLAADRGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGH 125
Query: 86 TEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEK 127
E+V +LL+ GADV+ +D++G T +I N ++ ++L+K
Sbjct: 126 LEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 22/187 (11%)
Query: 193 RVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTA 252
R R FR+ L Q H NV++ + + +V E + G + + + ++ A
Sbjct: 54 RSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEA 113
Query: 253 VRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK 312
D+A +++LH I HRDL+P ++ + + +K+ DFG+
Sbjct: 114 SVVVQDVASALDFLHNKG---IAHRDLKPENILCEH--------PNQVSPVKICDFGLGS 162
Query: 313 LLTVKED-RPLTCQD-----TSCRYVAPEVFK--NEE---YDTKVDVFSFALILQEMIEG 361
+ + D P++ + S Y+APEV + +EE YD + D++S +IL ++ G
Sbjct: 163 GIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
Query: 362 CPPFTMK 368
PPF +
Sbjct: 223 YPPFVGR 229
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 131/293 (44%), Gaps = 38/293 (12%)
Query: 148 YEIDPHELDFTNSVEITKGTFILAFWRGIQVAVKKLGE----EVI------SDDDRVRAF 197
++I +L F S + +GTF F +G++ V G+ EV+ + + +F
Sbjct: 3 HKIRNEDLIFNES--LGQGTFTKIF-KGVRREVGDYGQLHETEVLLKVLDKAHRNYSESF 59
Query: 198 RDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR-KGALKPSTAVRFA 256
+ +++ K+ H ++V G ++V E++ G L +LK+ K + + A
Sbjct: 60 FEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVA 119
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGN---LKVADFGVSKL 313
+A M++L EN +IH ++ ++ + + DR +GN +K++D G+S
Sbjct: 120 KQLAWAMHFLEENT---LIHGNVCAKNILLIR-EEDRK-----TGNPPFIKLSDPGIS-- 168
Query: 314 LTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMIEGC-PPFTMKHDN 371
+TV P +V PE +N + + D +SF L E+ G P +
Sbjct: 169 ITV---LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ 225
Query: 372 EVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 424
+ Y R + P AP A L LI C + +P RP+FR II L S+
Sbjct: 226 RKLQFYEDRHQLP--APK---AAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4
pdb|2Y1L|F Chain F, Caspase-8 In Complex With Darpin-8.4
Length = 169
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 63/120 (52%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRD 70
LL+ + D E + NG D + E+ L A +E ++ LL +G DVN D
Sbjct: 18 LLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVD 77
Query: 71 IDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
T L +AA G E+V +LL+ GADV+ D G TPL A + + E++++L K+GA
Sbjct: 78 HAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGA 137
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 62/105 (59%), Gaps = 5/105 (4%)
Query: 23 RKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAAC 82
+ A++N +D G + P RL L ++ ++ LL +G DVN D++ T LH+AA
Sbjct: 68 KNGADVNAVDHAG--MTP-LRLAALFGHLEI--VEVLLKNGADVNANDMEGHTPLHLAAM 122
Query: 83 QGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEK 127
G E+V +LL+ GADV+ +D++G T +I N ++ ++L+K
Sbjct: 123 FGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167
>pdb|3HG0|D Chain D, Crystal Structure Of A Darpin In Complex With Orf49 From
Lactococcal Phage Tp901-1
Length = 136
Score = 57.8 bits (138), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 61/117 (52%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRD 70
LL+ + D E + NG D + E+ L A +E ++ LL +G DVN D
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAID 77
Query: 71 IDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEK 127
T LH+ A G E+V +LL+ GADV+ +D++G T +I N ++ ++L+K
Sbjct: 78 AIGETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 57.0 bits (136), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 45/75 (60%)
Query: 56 IKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIY 115
++ L+ +G DVN D T LH+AA E+V +LL+ GADV+ D G TPL
Sbjct: 30 VRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIGETPLHLVAM 89
Query: 116 YKNHEVIKLLEKHGA 130
Y + E++++L KHGA
Sbjct: 90 YGHLEIVEVLLKHGA 104
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 50/260 (19%)
Query: 191 DDRVRAFRDELALLQKIRHPNVVQF-------------LGAVTQSSPMMIVTEYLPKGDL 237
++++ E+ LL + H VV++ + AV + S + I EY L
Sbjct: 43 EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTL 102
Query: 238 RAFLKRKGALKPSTAV-RFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNIL 296
+ + + R I ++Y+H IIHRDL+P ++++
Sbjct: 103 YDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFI---------- 149
Query: 297 RDDSGNLKVADFGVSK-----LLTVKEDRP--------LTCQDTSCRYVAPEVFKNE-EY 342
D+S N+K+ DFG++K L +K D LT + YVA EV Y
Sbjct: 150 -DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHY 208
Query: 343 DTKVDVFSFALILQEMIEGCPPFT--MKHDNEVPKAYAAR-QRPPFKAPAKLYARGLKEL 399
+ K+D++S +I EMI PF+ M+ N + K + + PP K+ K++
Sbjct: 209 NEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVE--KKI 263
Query: 400 IEECWNEKPAKRPTFRQIIT 419
I + P KRP R ++
Sbjct: 264 IRLLIDHDPNKRPGARTLLN 283
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 98/209 (46%), Gaps = 18/209 (8%)
Query: 162 EITKGTF-----ILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
E+ KG F + G + A K + + +S D + R E + + ++HPN+V+
Sbjct: 29 ELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLER-EARICRLLKHPNIVRLH 87
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
++++ ++ + + G+L + + + A I + + H+ + ++H
Sbjct: 88 DSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ---MGVVH 144
Query: 277 RDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEV 336
RDL+P +L +A + +K+ADFG++ + ++ T Y++PEV
Sbjct: 145 RDLKPENLLLAS--------KLKGAAVKLADFGLAIEVEGEQQAWFGFAGTP-GYLSPEV 195
Query: 337 FKNEEYDTKVDVFSFALILQEMIEGCPPF 365
+ + Y VD+++ +IL ++ G PPF
Sbjct: 196 LRKDPYGKPVDLWACGVILYILLVGYPPF 224
>pdb|2XEN|A Chain A, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module
Length = 91
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 48/72 (66%)
Query: 56 IKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIY 115
++ L+ +G DVN +D D T LH+AA +G E+V +LL+ GADV+ +D++G T +I
Sbjct: 18 VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISID 77
Query: 116 YKNHEVIKLLEK 127
N ++ ++L+K
Sbjct: 78 NGNEDLAEILQK 89
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 80 AACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
AA G + V +L+ GADV+ KD+ G TPL A + E++++L K GA
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGA 59
>pdb|2BKK|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase Aph
(3')-Iiia In Complex With The Inhibitor Ar_3a
pdb|2BKK|D Chain D, Crystal Structure Of Aminoglycoside Phosphotransferase Aph
(3')-Iiia In Complex With The Inhibitor Ar_3a
Length = 169
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 62/120 (51%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRD 70
LL+ + D E + NG D + + L + N +E I+ LL DVN D
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASD 77
Query: 71 IDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
T LH+AA +G E+V +LL+ GADV+ D G TPL A + E++++L K+GA
Sbjct: 78 KSGWTPLHLAAYRGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGA 137
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%)
Query: 53 VEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGD 112
+E ++ LL G DVN D T LH+AA G E+V +LL+ GADV+ +D++G T
Sbjct: 93 LEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDKFGKTAFDI 152
Query: 113 AIYYKNHEVIKLLEK 127
+I N ++ ++L+K
Sbjct: 153 SIDNGNEDLAEILQK 167
>pdb|4GRG|A Chain A, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige
Inhibitor
pdb|4GRG|B Chain B, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige
Inhibitor
Length = 135
Score = 57.0 bits (136), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 45/75 (60%)
Query: 56 IKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIY 115
++ L +G DVN D T LH+AA G E+V +LL+ GADV+ G TPL A +
Sbjct: 30 VRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTGRTPLHLAAW 89
Query: 116 YKNHEVIKLLEKHGA 130
+ E++++L KHGA
Sbjct: 90 ADHLEIVEVLLKHGA 104
Score = 55.8 bits (133), Expect = 5e-08, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 60/117 (51%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRD 70
LL+ + D E + NG D + + L A +E ++ LL +G DVN
Sbjct: 18 LLEAARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATG 77
Query: 71 IDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEK 127
RT LH+AA E+V +LL+ GADV+ +D++G T +I N ++ ++L+K
Sbjct: 78 NTGRTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
>pdb|1K1B|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Bcl-3: A
Unique Member Of The Ikappab Protein Family
pdb|1K1A|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Bcl-3: A
Unique Member Of The Ikappab Protein Family
Length = 241
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Query: 56 IKELLDSG----IDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKD-RWGSTPL 110
++ LLDS +D+ R+ D TALHVA E V LLLERGAD+D D + G +PL
Sbjct: 95 LRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPL 154
Query: 111 GDAIYYKNHEVIKLLEKHGAK 131
A+ + +++LL +HGA
Sbjct: 155 IHAVENNSLSMVQLLLQHGAN 175
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Query: 30 GLDDDGEEIKPEFRLMFLANERD-VEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEV 88
G D D +IK + A E + + ++ LL G +VN + +ALH A+ +G +
Sbjct: 139 GADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPL 198
Query: 89 VSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGAKP 132
V L+ GAD K+ TPL + ++ VI +L +P
Sbjct: 199 VRTLVRSGADSSLKNCHNDTPL---MVARSRRVIDILRGKATRP 239
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 70 DIDNRTALHVAACQG----FTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLL 125
D D T LH+A QG +V+L + G ++D + TPL A+ V++LL
Sbjct: 6 DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLL 65
Query: 126 EKHGAKPLMAPMHVKHA 142
GA P+ H + A
Sbjct: 66 VTAGASPMALDRHGQTA 82
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 81/188 (43%), Gaps = 26/188 (13%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM------MIVTEY 231
VA+KKL + RA+R EL L++ + H N++ L T + +V E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME- 109
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
L +L ++ + L + G+ +LH IIHRDL+PS
Sbjct: 110 LMDANLXQVIQME--LDHERMSYLLYQMLXGIKHLHS---AGIIHRDLKPS--------- 155
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 351
NI+ LK+ DFG+++ T +T + Y APEV Y VD++S
Sbjct: 156 --NIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 211
Query: 352 ALILQEMI 359
I+ EM+
Sbjct: 212 GCIMGEMV 219
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 34/192 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVFT---PQKTLEEF---QDV 104
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSDLYVA 287
++ A ++ LD R G+ +LH IIHRDL+PS
Sbjct: 105 YLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPS----- 155
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVD 347
NI+ LK+ DFG+++ T +T + Y APEV Y VD
Sbjct: 156 ------NIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 207
Query: 348 VFSFALILQEMI 359
++S I+ EM+
Sbjct: 208 IWSVGCIMGEMV 219
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 34/192 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVFT---PQKTLEEF---QDV 104
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSDLYVA 287
++ A ++ LD R G+ +LH IIHRDL+PS
Sbjct: 105 YLVMELMDA-NLXQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPS----- 155
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVD 347
NI+ LK+ DFG+++ T +T + Y APEV Y VD
Sbjct: 156 ------NIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 207
Query: 348 VFSFALILQEMI 359
++S I+ EM+
Sbjct: 208 IWSVGCIMGEMV 219
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 34/192 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 51 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFT---PQKTLEEF---QDV 103
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSDLYVA 287
++ A ++ LD R G+ +LH IIHRDL+PS
Sbjct: 104 YLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPS----- 154
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVD 347
NI+ LK+ DFG+++ T +T + Y APEV Y VD
Sbjct: 155 ------NIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 206
Query: 348 VFSFALILQEMI 359
++S I+ EM+
Sbjct: 207 IWSVGCIMGEMV 218
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 34/192 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFT---PQKTLEEF---QDV 105
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSDLYVA 287
++ A ++ LD R G+ +LH IIHRDL+PS
Sbjct: 106 YLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPS----- 156
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVD 347
NI+ LK+ DFG+++ T +T + Y APEV Y VD
Sbjct: 157 ------NIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 208
Query: 348 VFSFALILQEMI 359
++S I+ EM+
Sbjct: 209 IWSVGCIMGEMV 220
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 34/192 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFT---PQKTLEEF---QDV 104
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSDLYVA 287
++ A ++ LD R G+ +LH IIHRDL+PS
Sbjct: 105 YLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPS----- 155
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVD 347
NI+ LK+ DFG+++ T +T + Y APEV Y VD
Sbjct: 156 ------NIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 207
Query: 348 VFSFALILQEMI 359
++S I+ EM+
Sbjct: 208 IWSVGCIMGEMV 219
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 34/192 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFT---PQKTLEEF---QDV 105
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSDLYVA 287
++ A ++ LD R G+ +LH IIHRDL+PS
Sbjct: 106 YLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPS----- 156
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVD 347
NI+ LK+ DFG+++ T +T + Y APEV Y VD
Sbjct: 157 ------NIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 208
Query: 348 VFSFALILQEMI 359
++S I+ EM+
Sbjct: 209 IWSVGCIMGEMV 220
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 82/190 (43%), Gaps = 26/190 (13%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM------MIVTEY 231
VA+KKL + RA+R EL L++ + H N++ L T + IV E
Sbjct: 54 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME- 111
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
L +L ++ + L + G+ +LH IIHRDL+PS
Sbjct: 112 LMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPS--------- 157
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 351
NI+ LK+ DFG+++ T + + Y APEV Y VD++S
Sbjct: 158 --NIVVKSDCTLKILDFGLAR--TAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSV 213
Query: 352 ALILQEMIEG 361
I+ EMI+G
Sbjct: 214 GCIMGEMIKG 223
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 34/192 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFT---PQKTLEEF---QDV 104
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSDLYVA 287
++ A ++ LD R G+ +LH IIHRDL+PS
Sbjct: 105 YLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPS----- 155
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVD 347
NI+ LK+ DFG+++ T +T + Y APEV Y VD
Sbjct: 156 ------NIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 207
Query: 348 VFSFALILQEMI 359
++S I+ EM+
Sbjct: 208 IWSVGCIMGEMV 219
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 81/188 (43%), Gaps = 26/188 (13%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM------MIVTEY 231
VA+KKL + RA+R EL L++ + H N++ L T + +V E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME- 109
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
L +L ++ + L + G+ +LH IIHRDL+PS
Sbjct: 110 LMDANLXQVIQME--LDHERMSYLLYQMLXGIKHLHS---AGIIHRDLKPS--------- 155
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 351
NI+ LK+ DFG+++ T +T + Y APEV Y VD++S
Sbjct: 156 --NIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 211
Query: 352 ALILQEMI 359
I+ EM+
Sbjct: 212 GCIMGEMV 219
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 81/188 (43%), Gaps = 26/188 (13%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM------MIVTEY 231
VA+KKL + RA+R EL L++ + H N++ L T + +V E
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME- 102
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
L +L ++ + L + G+ +LH IIHRDL+PS
Sbjct: 103 LMDANLXQVIQME--LDHERMSYLLYQMLXGIKHLHS---AGIIHRDLKPS--------- 148
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 351
NI+ LK+ DFG+++ T +T + Y APEV Y VD++S
Sbjct: 149 --NIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 204
Query: 352 ALILQEMI 359
I+ EM+
Sbjct: 205 GCIMGEMV 212
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 34/192 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFT---PQKTLEEF---QDV 97
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSDLYVA 287
++ A ++ LD R G+ +LH IIHRDL+PS
Sbjct: 98 YLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPS----- 148
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVD 347
NI+ LK+ DFG+++ T +T + Y APEV Y VD
Sbjct: 149 ------NIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 200
Query: 348 VFSFALILQEMI 359
++S I+ EM+
Sbjct: 201 IWSVGCIMGEMV 212
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 34/192 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFT---PQKTLEEF---QDV 142
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSDLYVA 287
++ A ++ LD R G+ +LH IIHRDL+PS
Sbjct: 143 YLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPS----- 193
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVD 347
NI+ LK+ DFG+++ T +T + Y APEV Y VD
Sbjct: 194 ------NIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 245
Query: 348 VFSFALILQEMI 359
++S I+ EM+
Sbjct: 246 IWSVGCIMGEMV 257
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 34/192 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFT---PQKTLEEF---QDV 98
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSDLYVA 287
++ A ++ LD R G+ +LH IIHRDL+PS
Sbjct: 99 YLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPS----- 149
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVD 347
NI+ LK+ DFG+++ T +T + Y APEV Y VD
Sbjct: 150 ------NIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 201
Query: 348 VFSFALILQEMI 359
++S I+ EM+
Sbjct: 202 IWSVGCIMGEMV 213
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 34/192 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFT---PQKTLEEF---QDV 98
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSDLYVA 287
++ A ++ LD R G+ +LH IIHRDL+PS
Sbjct: 99 YLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPS----- 149
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVD 347
NI+ LK+ DFG+++ T +T + Y APEV Y VD
Sbjct: 150 ------NIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 201
Query: 348 VFSFALILQEMI 359
++S I+ EM+
Sbjct: 202 IWSVGCIMGEMV 213
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 34/192 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFT---PQKTLEEF---QDV 142
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSDLYVA 287
++ A ++ LD R G+ +LH IIHRDL+PS
Sbjct: 143 YLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPS----- 193
Query: 288 YWQNDRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVD 347
NI+ LK+ DFG+++ T +T + Y APEV Y VD
Sbjct: 194 ------NIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 245
Query: 348 VFSFALILQEMI 359
++S I+ EM+
Sbjct: 246 IWSVGCIMGEMV 257
>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar
Affinity To Her2
pdb|2JAB|B Chain B, A Designed Ankyrin Repeat Protein Evolved To Picomolar
Affinity To Her2
pdb|2JAB|C Chain C, A Designed Ankyrin Repeat Protein Evolved To Picomolar
Affinity To Her2
Length = 136
Score = 55.8 bits (133), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 46/75 (61%)
Query: 56 IKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIY 115
++ L+ +G DVN +D T L++A G E+V +LL+ GADV+ D G TPL A +
Sbjct: 30 VRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89
Query: 116 YKNHEVIKLLEKHGA 130
+ E+ ++L KHGA
Sbjct: 90 IGHLEIAEVLLKHGA 104
Score = 54.7 bits (130), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 6/120 (5%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRL--MFLANER-DVEGIKELLDSGIDVN 67
LL+ + D E + NG D + K E+ L ++LA +E ++ LL +G DVN
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNA---KDEYGLTPLYLATAHGHLEIVEVLLKNGADVN 74
Query: 68 FRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEK 127
D T LH+AA G E+ +LL+ GADV+ +D++G T +I N ++ ++L+K
Sbjct: 75 AVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 40/186 (21%)
Query: 200 ELALLQKIRHPNVVQFLGA---------VTQSSP---MMIVTEYLPKGDLRAFLKRKGAL 247
E+ L K+ HP +V++ A + SSP + I + K +L+ ++ + +
Sbjct: 53 EVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTI 112
Query: 248 KP---STAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLK 304
+ S + L IA + +LH ++HRDL+PS+++ DD +K
Sbjct: 113 EERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTM---------DDV--VK 158
Query: 305 VADFGVSKLLTVKEDR-----PL------TCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 353
V DFG+ + E+ P+ T Q + Y++PE Y KVD+FS L
Sbjct: 159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGL 218
Query: 354 ILQEMI 359
IL E++
Sbjct: 219 ILFELL 224
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 101/225 (44%), Gaps = 32/225 (14%)
Query: 200 ELALLQKIRH-PNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFA 256
E+A+L+ + P V+ +S ++++ EY G++ + + A + + +R
Sbjct: 78 EIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLI 137
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDS---GNLKVADFGVS-K 312
I G+ YLH+N I+H DL+P +NIL G++K+ DFG+S K
Sbjct: 138 KQILEGVYYLHQNN---IVHLDLKP-----------QNILLSSIYPLGDIKIVDFGMSRK 183
Query: 313 LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNE 372
+ E R + + Y+APE+ + T D+++ +I ++ PF + + E
Sbjct: 184 IGHACELREIM---GTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE 240
Query: 373 ----VPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPT 413
+ + F + ++L ++ L+ + P KRPT
Sbjct: 241 TYLNISQVNVDYSEETFSSVSQLATDFIQSLLV----KNPEKRPT 281
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 81/188 (43%), Gaps = 26/188 (13%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM------MIVTEY 231
VA+KKL + RA+R EL L++ + H N++ L T + IV E
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME- 103
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
L +L ++ + L + G+ +LH IIHRDL+PS
Sbjct: 104 LMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPS--------- 149
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 351
NI+ LK+ DFG+++ T +T + Y APEV Y VD++S
Sbjct: 150 --NIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSV 205
Query: 352 ALILQEMI 359
I+ EM+
Sbjct: 206 GCIMGEMV 213
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 81/188 (43%), Gaps = 26/188 (13%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM------MIVTEY 231
VA+KKL + RA+R EL L++ + H N++ L T + IV E
Sbjct: 57 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME- 114
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQN 291
L +L ++ + L + G+ +LH IIHRDL+PS
Sbjct: 115 LMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPS--------- 160
Query: 292 DRNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 351
NI+ LK+ DFG+++ T +T + Y APEV Y VD++S
Sbjct: 161 --NIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSV 216
Query: 352 ALILQEMI 359
I+ EM+
Sbjct: 217 GCIMGEMV 224
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 25/179 (13%)
Query: 200 ELALLQKIRHPNVVQFLGAV--TQSSPMMIVTEYLPKGDLRAFLKRKG---ALKPSTAVR 254
E +L+K+ H N+V+ T + +++ E+ P G L L+ L S +
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI 116
Query: 255 FALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSKLL 314
D+ GMN+L EN I+HR+++P ++ R I D K+ DFG ++ L
Sbjct: 117 VLRDVVGGMNHLRENG---IVHRNIKPGNIM-------RVIGEDGQSVYKLTDFGAAREL 166
Query: 315 TVKEDRPLTCQDTSCRYVAPEVFK--------NEEYDTKVDVFSFALILQEMIEGCPPF 365
++D + Y+ P++++ ++Y VD++S + G PF
Sbjct: 167 --EDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 85/187 (45%), Gaps = 22/187 (11%)
Query: 193 RVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTA 252
R R FR+ L Q H NV++ + + +V E + G + + + ++ A
Sbjct: 54 RSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEA 113
Query: 253 VRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDDSGNLKVADFGVSK 312
D+A +++LH I HRDL+P ++ + + +K+ DF +
Sbjct: 114 SVVVQDVASALDFLHNKG---IAHRDLKPENILCEH--------PNQVSPVKICDFDLGS 162
Query: 313 LLTVKED-RPLTCQD-----TSCRYVAPEVFK--NEE---YDTKVDVFSFALILQEMIEG 361
+ + D P++ + S Y+APEV + +EE YD + D++S +IL ++ G
Sbjct: 163 GIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
Query: 362 CPPFTMK 368
PPF +
Sbjct: 223 YPPFVGR 229
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 100/241 (41%), Gaps = 28/241 (11%)
Query: 181 KKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG-DLRA 239
+K+ E+ +D ++ E+A+L ++ H N+++ L +V E G DL A
Sbjct: 60 EKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFA 119
Query: 240 FLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRNILRDD 299
F+ R L A + + YL IIHRD++ D NI+ +
Sbjct: 120 FIDRHPRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIK-----------DENIVIAE 165
Query: 300 SGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY-DTKVDVFSFALILQEM 358
+K+ DFG + L + C + Y APEV Y +++++S + L +
Sbjct: 166 DFTIKLIDFGSAAYLERGKLFYTFC--GTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTL 223
Query: 359 IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 418
+ PF E+ + A PP+ L ++ L L+ P +R T +++
Sbjct: 224 VFEENPFC-----ELEETVEAAIHPPY-----LVSKELMSLVSGLLQPVPERRTTLEKLV 273
Query: 419 T 419
T
Sbjct: 274 T 274
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 104/248 (41%), Gaps = 28/248 (11%)
Query: 179 AVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLR 238
AVK++ V S + + R D + + P V F GA+ + + I E L L
Sbjct: 63 AVKRIRATVNSQEQK-RLLXDLDISXRTVDCPFTVTFYGALFREGDVWICXE-LXDTSLD 120
Query: 239 AFLKR---KGALKPSTAV-RFALDIARGMNYLHENKPVPIIHRDLEPSDLYVAYWQNDRN 294
F K+ KG P + + A+ I + + +LH + +IHRD++PS N
Sbjct: 121 KFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPS-----------N 167
Query: 295 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR-YVAPEVFKNE----EYDTKVDVF 349
+L + G +K DFG+S L + + D C+ Y APE E Y K D++
Sbjct: 168 VLINALGQVKXCDFGISGYLVDDVAKDI---DAGCKPYXAPERINPELNQKGYSVKSDIW 224
Query: 350 SFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPA 409
S + E+ P+ + + P + PA ++ + +C +
Sbjct: 225 SLGITXIELAILRFPYD-SWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSK 283
Query: 410 KRPTFRQI 417
+RPT+ ++
Sbjct: 284 ERPTYPEL 291
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,589,251
Number of Sequences: 62578
Number of extensions: 592771
Number of successful extensions: 4779
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 357
Number of HSP's that attempted gapping in prelim test: 1499
Number of HSP's gapped (non-prelim): 1442
length of query: 469
length of database: 14,973,337
effective HSP length: 102
effective length of query: 367
effective length of database: 8,590,381
effective search space: 3152669827
effective search space used: 3152669827
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)