Query 012165
Match_columns 469
No_of_seqs 444 out of 3333
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 04:02:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012165.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012165hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lxd_A FAD-dependent pyridine 100.0 1.5E-56 5E-61 450.7 43.1 377 49-450 7-407 (415)
2 3fg2_P Putative rubredoxin red 100.0 3.5E-56 1.2E-60 446.2 44.4 375 51-451 1-397 (404)
3 3ef6_A Toluene 1,2-dioxygenase 100.0 2.5E-56 8.6E-61 447.8 40.3 372 51-450 2-395 (410)
4 1q1r_A Putidaredoxin reductase 100.0 5.8E-52 2E-56 418.5 42.6 384 50-457 3-413 (431)
5 3klj_A NAD(FAD)-dependent dehy 100.0 6.2E-53 2.1E-57 418.5 30.7 354 49-457 7-383 (385)
6 2gqw_A Ferredoxin reductase; f 100.0 8.7E-52 3E-56 414.4 38.8 372 50-455 6-402 (408)
7 1m6i_A Programmed cell death p 100.0 1.3E-49 4.4E-54 407.7 29.8 386 48-442 8-479 (493)
8 4eqs_A Coenzyme A disulfide re 100.0 8.5E-47 2.9E-51 381.0 33.7 374 52-455 1-425 (437)
9 1xhc_A NADH oxidase /nitrite r 100.0 5.1E-46 1.7E-50 367.0 31.2 337 52-436 9-363 (367)
10 2bc0_A NADH oxidase; flavoprot 100.0 1.9E-46 6.5E-51 384.5 28.7 388 50-461 34-483 (490)
11 2cdu_A NADPH oxidase; flavoenz 100.0 3.3E-46 1.1E-50 379.3 27.3 382 52-458 1-435 (452)
12 3oc4_A Oxidoreductase, pyridin 100.0 1.6E-45 5.3E-50 374.2 31.2 377 52-454 3-426 (452)
13 3iwa_A FAD-dependent pyridine 100.0 8.2E-46 2.8E-50 378.4 28.6 390 51-457 3-448 (472)
14 3cgb_A Pyridine nucleotide-dis 100.0 4.9E-45 1.7E-49 373.1 30.1 405 29-459 15-472 (480)
15 2v3a_A Rubredoxin reductase; a 100.0 2.8E-44 9.7E-49 357.5 33.4 349 50-433 3-377 (384)
16 3kd9_A Coenzyme A disulfide re 100.0 1E-44 3.4E-49 368.1 28.4 378 50-454 2-428 (449)
17 3ntd_A FAD-dependent pyridine 100.0 2.6E-44 8.8E-49 375.8 30.9 369 51-442 1-437 (565)
18 1nhp_A NADH peroxidase; oxidor 100.0 6.5E-45 2.2E-49 369.2 25.6 383 52-460 1-436 (447)
19 3ics_A Coenzyme A-disulfide re 100.0 2.3E-42 7.7E-47 362.4 36.5 389 29-442 15-453 (588)
20 1mo9_A ORF3; nucleotide bindin 100.0 2.6E-40 8.9E-45 341.3 35.5 386 47-465 39-519 (523)
21 2qae_A Lipoamide, dihydrolipoy 100.0 1.5E-41 5E-46 346.6 23.7 383 51-466 2-464 (468)
22 1xdi_A RV3303C-LPDA; reductase 100.0 8.2E-41 2.8E-45 343.6 26.0 382 51-465 2-466 (499)
23 1zk7_A HGII, reductase, mercur 100.0 1.1E-39 3.9E-44 332.6 32.7 380 50-464 3-456 (467)
24 1zmd_A Dihydrolipoyl dehydroge 100.0 7.3E-40 2.5E-44 334.6 31.4 383 50-463 5-466 (474)
25 2a8x_A Dihydrolipoyl dehydroge 100.0 3.7E-41 1.3E-45 343.2 20.2 382 51-466 3-460 (464)
26 1dxl_A Dihydrolipoamide dehydr 100.0 4.9E-41 1.7E-45 343.1 20.5 385 49-466 4-466 (470)
27 1ojt_A Surface protein; redox- 100.0 1.8E-40 6.2E-45 339.6 24.0 382 50-465 5-472 (482)
28 2hqm_A GR, grase, glutathione 100.0 1.4E-40 4.9E-45 339.9 22.9 379 50-460 10-471 (479)
29 1ebd_A E3BD, dihydrolipoamide 100.0 3.8E-40 1.3E-44 335.0 25.8 378 51-463 3-454 (455)
30 1v59_A Dihydrolipoamide dehydr 100.0 2.2E-40 7.4E-45 338.9 23.6 385 51-465 5-473 (478)
31 2eq6_A Pyruvate dehydrogenase 100.0 4.7E-40 1.6E-44 334.8 22.8 379 51-466 6-457 (464)
32 3urh_A Dihydrolipoyl dehydroge 100.0 1.7E-39 5.9E-44 333.2 25.5 386 48-466 22-487 (491)
33 2wpf_A Trypanothione reductase 100.0 1.2E-40 4.1E-45 341.4 16.4 299 130-460 117-475 (495)
34 1onf_A GR, grase, glutathione 100.0 3.5E-40 1.2E-44 338.7 19.5 384 51-460 2-496 (500)
35 1fec_A Trypanothione reductase 100.0 1.9E-40 6.5E-45 339.7 17.3 376 50-460 2-471 (490)
36 3l8k_A Dihydrolipoyl dehydroge 100.0 7.1E-40 2.4E-44 333.8 20.6 383 51-463 4-457 (466)
37 1ges_A Glutathione reductase; 100.0 1.8E-40 6E-45 336.6 15.9 373 50-458 3-448 (450)
38 3lad_A Dihydrolipoamide dehydr 100.0 9.1E-39 3.1E-43 326.7 27.2 384 50-466 2-467 (476)
39 2r9z_A Glutathione amide reduc 100.0 6E-39 2E-43 326.4 24.6 374 50-460 3-448 (463)
40 2yqu_A 2-oxoglutarate dehydrog 100.0 3.2E-38 1.1E-42 320.8 28.6 380 52-466 2-451 (455)
41 1lvl_A Dihydrolipoamide dehydr 100.0 3.4E-39 1.2E-43 327.9 21.2 377 50-466 4-454 (458)
42 4dna_A Probable glutathione re 100.0 1.1E-39 3.7E-44 332.2 17.3 378 50-463 4-453 (463)
43 3dk9_A Grase, GR, glutathione 100.0 3.4E-39 1.2E-43 330.0 21.0 378 49-458 18-476 (478)
44 2vdc_G Glutamate synthase [NAD 100.0 3.9E-40 1.3E-44 332.9 13.6 317 3-357 60-441 (456)
45 3dgh_A TRXR-1, thioredoxin red 100.0 2.4E-39 8.1E-44 331.5 19.3 381 49-460 7-475 (483)
46 4b1b_A TRXR, thioredoxin reduc 100.0 2.9E-39 9.9E-44 331.6 19.8 382 51-464 42-525 (542)
47 3dgz_A Thioredoxin reductase 2 100.0 3.6E-38 1.2E-42 323.0 27.0 381 50-461 5-476 (488)
48 3ic9_A Dihydrolipoamide dehydr 100.0 1.7E-38 5.9E-43 325.3 23.1 381 50-465 7-468 (492)
49 3qfa_A Thioredoxin reductase 1 100.0 3.4E-38 1.2E-42 325.0 25.4 384 49-462 30-505 (519)
50 3o0h_A Glutathione reductase; 100.0 6.8E-39 2.3E-43 328.0 17.2 377 50-462 25-472 (484)
51 1gte_A Dihydropyrimidine dehyd 100.0 2.3E-38 7.7E-43 349.3 16.8 335 3-371 117-526 (1025)
52 2x8g_A Thioredoxin glutathione 100.0 2.6E-37 8.8E-42 324.5 23.9 383 49-461 105-583 (598)
53 4g6h_A Rotenone-insensitive NA 100.0 6.4E-38 2.2E-42 320.7 18.5 282 46-357 37-398 (502)
54 4gcm_A TRXR, thioredoxin reduc 100.0 1.5E-36 5.1E-41 293.2 21.2 280 48-356 3-302 (312)
55 3ab1_A Ferredoxin--NADP reduct 100.0 4.8E-36 1.6E-40 295.6 21.5 300 49-374 12-342 (360)
56 3lzw_A Ferredoxin--NADP reduct 100.0 9.9E-37 3.4E-41 296.7 15.2 281 50-357 6-312 (332)
57 2zbw_A Thioredoxin reductase; 100.0 6.9E-36 2.4E-40 291.4 19.1 282 49-357 3-314 (335)
58 4a5l_A Thioredoxin reductase; 100.0 3.8E-36 1.3E-40 290.5 16.5 286 49-356 2-308 (314)
59 3f8d_A Thioredoxin reductase ( 100.0 4.7E-35 1.6E-39 283.6 22.6 277 50-357 14-314 (323)
60 3fbs_A Oxidoreductase; structu 100.0 3E-35 1E-39 281.6 20.9 267 51-357 2-289 (297)
61 3cty_A Thioredoxin reductase; 100.0 1.1E-34 3.8E-39 281.0 23.6 276 50-357 15-313 (319)
62 3hyw_A Sulfide-quinone reducta 100.0 1.6E-35 5.6E-40 298.4 18.1 283 51-357 2-330 (430)
63 2q7v_A Thioredoxin reductase; 100.0 1.7E-34 5.7E-39 280.5 23.8 275 50-357 7-309 (325)
64 3vrd_B FCCB subunit, flavocyto 100.0 9.7E-35 3.3E-39 290.5 21.9 278 51-357 2-321 (401)
65 4fk1_A Putative thioredoxin re 100.0 2.2E-35 7.4E-40 284.1 16.4 272 48-356 3-296 (304)
66 1fl2_A Alkyl hydroperoxide red 100.0 9.4E-35 3.2E-39 280.2 20.5 274 51-357 1-302 (310)
67 2q0l_A TRXR, thioredoxin reduc 100.0 3E-34 1E-38 276.8 23.2 277 51-357 1-306 (311)
68 3r9u_A Thioredoxin reductase; 100.0 2.7E-34 9.2E-39 277.4 22.8 276 50-357 3-309 (315)
69 3itj_A Thioredoxin reductase 1 100.0 1.6E-34 5.6E-39 281.7 17.4 284 47-357 18-332 (338)
70 3sx6_A Sulfide-quinone reducta 100.0 5.9E-34 2E-38 287.8 19.5 285 51-357 4-341 (437)
71 1trb_A Thioredoxin reductase; 100.0 6.2E-34 2.1E-38 275.7 18.1 276 50-357 4-311 (320)
72 1vdc_A NTR, NADPH dependent th 100.0 7.8E-34 2.7E-38 276.7 18.7 278 49-357 6-320 (333)
73 3h8l_A NADH oxidase; membrane 100.0 3E-33 1E-37 280.4 21.6 272 51-357 1-333 (409)
74 2a87_A TRXR, TR, thioredoxin r 100.0 4E-33 1.4E-37 272.0 19.4 276 48-356 11-312 (335)
75 1hyu_A AHPF, alkyl hydroperoxi 100.0 2.3E-32 8E-37 281.5 23.7 276 49-357 210-513 (521)
76 4a9w_A Monooxygenase; baeyer-v 100.0 9.6E-33 3.3E-37 271.0 16.9 276 51-357 3-349 (357)
77 3h28_A Sulfide-quinone reducta 100.0 2.6E-32 8.8E-37 275.3 16.0 279 51-357 2-330 (430)
78 3d1c_A Flavin-containing putat 100.0 3E-31 1E-35 262.0 19.3 286 51-359 4-338 (369)
79 1y56_A Hypothetical protein PH 100.0 9.5E-32 3.3E-36 275.2 13.9 253 51-357 108-374 (493)
80 1o94_A Tmadh, trimethylamine d 100.0 5.2E-32 1.8E-36 289.2 11.4 304 29-390 364-720 (729)
81 1cjc_A Protein (adrenodoxin re 100.0 5.8E-31 2E-35 266.5 10.9 272 50-357 5-392 (460)
82 2gag_A Heterotetrameric sarcos 100.0 6.1E-30 2.1E-34 280.3 17.7 271 51-357 128-441 (965)
83 2xve_A Flavin-containing monoo 100.0 1.6E-29 5.6E-34 256.7 18.7 283 52-360 3-341 (464)
84 3k30_A Histamine dehydrogenase 100.0 1.9E-30 6.6E-35 276.0 10.2 276 29-358 366-673 (690)
85 1lqt_A FPRA; NADP+ derivative, 100.0 1.6E-29 5.6E-34 255.6 10.1 268 50-357 2-384 (456)
86 1ps9_A 2,4-dienoyl-COA reducta 100.0 1.3E-28 4.3E-33 261.4 17.1 270 19-355 336-671 (671)
87 3s5w_A L-ornithine 5-monooxyge 100.0 5.4E-28 1.8E-32 246.2 18.7 272 50-327 29-421 (463)
88 2gv8_A Monooxygenase; FMO, FAD 100.0 7.2E-28 2.5E-32 244.0 16.9 286 49-359 4-361 (447)
89 3gwf_A Cyclohexanone monooxyge 99.9 2.1E-25 7.3E-30 229.8 18.2 281 50-356 7-453 (540)
90 3uox_A Otemo; baeyer-villiger 99.9 1.6E-23 5.4E-28 216.2 16.0 181 49-234 7-212 (545)
91 4ap3_A Steroid monooxygenase; 99.9 4.8E-23 1.6E-27 212.7 19.4 178 49-234 19-218 (549)
92 1w4x_A Phenylacetone monooxyge 99.9 3.1E-22 1.1E-26 207.2 19.2 284 49-357 14-463 (542)
93 2ywl_A Thioredoxin reductase r 99.8 9.5E-19 3.2E-23 154.3 14.5 134 209-357 3-168 (180)
94 4b63_A L-ornithine N5 monooxyg 99.8 1.7E-17 5.9E-22 169.7 21.1 273 49-324 37-457 (501)
95 3fpz_A Thiazole biosynthetic e 99.6 2E-19 6.7E-24 174.3 -15.6 294 4-356 18-321 (326)
96 2e5v_A L-aspartate oxidase; ar 99.5 4.3E-16 1.5E-20 158.1 -0.2 206 129-357 128-370 (472)
97 2gqf_A Hypothetical protein HI 99.5 3.1E-15 1E-19 148.6 -1.9 122 50-175 3-169 (401)
98 2cul_A Glucose-inhibited divis 99.4 2E-12 7E-17 118.4 14.5 137 208-357 4-229 (232)
99 2bry_A NEDD9 interacting prote 99.3 5.9E-13 2E-17 135.9 2.2 170 3-175 22-231 (497)
100 2ywl_A Thioredoxin reductase r 99.2 7E-11 2.4E-15 103.5 8.7 108 51-175 1-111 (180)
101 1rp0_A ARA6, thiazole biosynth 99.1 2.7E-10 9.3E-15 107.5 12.1 112 241-357 131-272 (284)
102 3k7m_X 6-hydroxy-L-nicotine ox 99.1 3.6E-11 1.2E-15 120.6 5.8 89 235-326 209-307 (431)
103 3pl8_A Pyranose 2-oxidase; sub 99.0 2.9E-12 9.9E-17 134.0 -9.6 60 240-299 270-335 (623)
104 2cul_A Glucose-inhibited divis 98.9 1.9E-09 6.3E-14 98.6 8.2 117 50-175 2-126 (232)
105 4dgk_A Phytoene dehydrogenase; 98.9 3.2E-09 1.1E-13 108.5 10.3 52 235-287 226-277 (501)
106 3v76_A Flavoprotein; structura 98.9 2.2E-09 7.6E-14 106.7 8.3 125 46-174 22-187 (417)
107 3alj_A 2-methyl-3-hydroxypyrid 98.9 2.2E-09 7.6E-14 105.6 7.1 121 50-175 10-161 (379)
108 3ces_A MNMG, tRNA uridine 5-ca 98.9 4.9E-09 1.7E-13 108.3 9.5 157 50-234 27-217 (651)
109 3nlc_A Uncharacterized protein 98.8 9.4E-09 3.2E-13 105.2 9.3 124 49-175 105-278 (549)
110 2i0z_A NAD(FAD)-utilizing dehy 98.8 8.1E-09 2.8E-13 103.9 7.9 124 48-174 23-191 (447)
111 1yvv_A Amine oxidase, flavin-c 98.7 3.5E-08 1.2E-12 95.1 10.3 119 51-173 2-161 (336)
112 2e4g_A Tryptophan halogenase; 98.7 4.1E-08 1.4E-12 101.4 11.1 54 235-289 199-253 (550)
113 2x3n_A Probable FAD-dependent 98.7 1.4E-08 4.9E-13 100.5 6.9 122 50-174 5-166 (399)
114 1d4d_A Flavocytochrome C fumar 98.7 3.3E-08 1.1E-12 102.5 9.9 38 50-90 125-162 (572)
115 3dme_A Conserved exported prot 98.7 3.5E-08 1.2E-12 96.2 9.4 47 128-174 158-209 (369)
116 3nix_A Flavoprotein/dehydrogen 98.7 1.7E-08 5.8E-13 100.6 7.1 122 50-174 4-166 (421)
117 3fmw_A Oxygenase; mithramycin, 98.7 2.7E-08 9.1E-13 103.0 8.7 123 49-174 47-207 (570)
118 2vou_A 2,6-dihydroxypyridine h 98.7 7.9E-08 2.7E-12 95.1 11.3 123 49-174 3-153 (397)
119 3i3l_A Alkylhalidase CMLS; fla 98.7 4.9E-08 1.7E-12 101.3 10.0 123 49-174 21-188 (591)
120 1s3e_A Amine oxidase [flavin-c 98.7 2.4E-08 8.2E-13 102.5 7.4 50 236-287 218-267 (520)
121 3cgv_A Geranylgeranyl reductas 98.7 3.8E-08 1.3E-12 97.1 8.4 122 50-174 3-162 (397)
122 3qj4_A Renalase; FAD/NAD(P)-bi 98.7 4.8E-08 1.6E-12 94.6 8.7 119 51-172 1-163 (342)
123 2xdo_A TETX2 protein; tetracyc 98.7 1.6E-07 5.6E-12 92.8 12.8 124 49-175 24-183 (398)
124 2zxi_A TRNA uridine 5-carboxym 98.6 2.4E-08 8.2E-13 102.8 6.0 157 50-234 26-216 (637)
125 3ps9_A TRNA 5-methylaminomethy 98.6 9.5E-08 3.3E-12 101.2 9.6 47 129-175 426-474 (676)
126 3ihg_A RDME; flavoenzyme, anth 98.6 8.6E-08 2.9E-12 98.7 8.7 38 49-89 3-40 (535)
127 1ryi_A Glycine oxidase; flavop 98.6 7.3E-08 2.5E-12 94.6 7.8 38 48-88 14-51 (382)
128 3oz2_A Digeranylgeranylglycero 98.6 4.5E-08 1.5E-12 96.3 5.9 122 50-174 3-162 (397)
129 3pvc_A TRNA 5-methylaminomethy 98.6 1.4E-06 4.7E-11 92.5 17.7 53 235-289 417-470 (689)
130 3cp8_A TRNA uridine 5-carboxym 98.6 3.9E-08 1.3E-12 101.5 5.2 159 49-234 19-211 (641)
131 2yqu_A 2-oxoglutarate dehydrog 98.6 9.3E-08 3.2E-12 96.4 7.9 99 50-176 166-266 (455)
132 1y56_B Sarcosine oxidase; dehy 98.6 6.2E-08 2.1E-12 95.2 6.3 46 128-174 157-205 (382)
133 2gmh_A Electron transfer flavo 98.6 1.7E-07 5.9E-12 97.3 10.0 37 50-89 34-76 (584)
134 2qa1_A PGAE, polyketide oxygen 98.5 5.1E-08 1.7E-12 99.4 5.7 123 49-174 9-165 (500)
135 3rp8_A Flavoprotein monooxygen 98.5 6.5E-08 2.2E-12 96.0 6.3 125 47-174 19-181 (407)
136 3e1t_A Halogenase; flavoprotei 98.5 1.4E-07 4.8E-12 96.6 8.4 124 49-175 5-173 (512)
137 3dje_A Fructosyl amine: oxygen 98.5 1.7E-07 6E-12 93.8 8.7 49 129-177 170-224 (438)
138 2bry_A NEDD9 interacting prote 98.5 2.2E-08 7.5E-13 102.0 2.1 129 162-291 37-233 (497)
139 2qa2_A CABE, polyketide oxygen 98.5 7.1E-08 2.4E-12 98.3 5.8 122 49-174 10-166 (499)
140 3atr_A Conserved archaeal prot 98.5 1.3E-08 4.5E-13 102.6 0.2 123 50-175 5-163 (453)
141 2gag_B Heterotetrameric sarcos 98.5 1.3E-07 4.5E-12 93.5 6.5 46 128-174 182-230 (405)
142 1k0i_A P-hydroxybenzoate hydro 98.4 2.6E-07 9.1E-12 91.1 7.9 122 51-175 2-164 (394)
143 1y0p_A Fumarate reductase flav 98.4 2.7E-07 9.2E-12 95.7 8.1 37 50-89 125-161 (571)
144 1qo8_A Flavocytochrome C3 fuma 98.4 2E-07 6.7E-12 96.6 7.0 38 49-89 119-156 (566)
145 2gqw_A Ferredoxin reductase; f 98.4 3.5E-07 1.2E-11 90.7 8.2 97 50-175 144-240 (408)
146 2uzz_A N-methyl-L-tryptophan o 98.4 4.4E-07 1.5E-11 88.7 8.5 46 129-175 158-205 (372)
147 3nrn_A Uncharacterized protein 98.4 2.8E-06 9.4E-11 84.6 14.4 51 235-289 194-244 (421)
148 3ka7_A Oxidoreductase; structu 98.4 1.4E-06 4.7E-11 86.8 11.9 53 235-289 201-253 (425)
149 2v3a_A Rubredoxin reductase; a 98.4 4.9E-07 1.7E-11 89.0 8.4 98 51-175 145-244 (384)
150 3axb_A Putative oxidoreductase 98.4 4E-07 1.4E-11 91.5 7.7 60 236-297 187-262 (448)
151 2r9z_A Glutathione amide reduc 98.4 4E-07 1.4E-11 91.9 7.7 99 50-176 165-266 (463)
152 3nyc_A D-arginine dehydrogenas 98.4 4.3E-07 1.5E-11 88.9 7.6 45 129-174 163-209 (381)
153 1ges_A Glutathione reductase; 98.4 4.2E-07 1.4E-11 91.4 7.6 98 50-175 166-266 (450)
154 1lvl_A Dihydrolipoamide dehydr 98.4 3.3E-07 1.1E-11 92.4 6.1 97 50-176 170-270 (458)
155 1xhc_A NADH oxidase /nitrite r 98.4 4.7E-07 1.6E-11 88.5 6.8 92 52-175 144-235 (367)
156 2eq6_A Pyruvate dehydrogenase 98.3 5E-07 1.7E-11 91.2 7.1 97 51-175 169-272 (464)
157 4eqs_A Coenzyme A disulfide re 98.3 1E-06 3.5E-11 88.1 9.3 95 51-175 147-241 (437)
158 3lxd_A FAD-dependent pyridine 98.3 8.8E-07 3E-11 88.1 8.7 98 51-175 152-252 (415)
159 1nhp_A NADH peroxidase; oxidor 98.3 8.2E-07 2.8E-11 89.2 8.3 98 50-175 148-247 (447)
160 1onf_A GR, grase, glutathione 98.3 9.7E-07 3.3E-11 90.0 8.8 98 51-176 176-277 (500)
161 2gf3_A MSOX, monomeric sarcosi 98.3 4E-07 1.4E-11 89.5 5.8 37 50-89 2-38 (389)
162 3ef6_A Toluene 1,2-dioxygenase 98.3 4.4E-07 1.5E-11 90.1 5.9 99 50-175 142-242 (410)
163 3kkj_A Amine oxidase, flavin-c 98.3 4.8E-07 1.7E-11 83.7 5.7 37 50-89 1-37 (336)
164 3c96_A Flavin-containing monoo 98.3 3.9E-07 1.3E-11 90.5 5.1 37 50-89 3-40 (410)
165 3klj_A NAD(FAD)-dependent dehy 98.3 2.2E-06 7.4E-11 84.3 10.3 84 206-293 8-121 (385)
166 2hqm_A GR, grase, glutathione 98.3 9.5E-07 3.3E-11 89.6 7.9 99 50-176 184-287 (479)
167 2oln_A NIKD protein; flavoprot 98.3 2.2E-06 7.4E-11 84.6 10.2 35 51-88 4-38 (397)
168 3fg2_P Putative rubredoxin red 98.3 1E-06 3.5E-11 87.2 7.8 98 51-175 142-242 (404)
169 4hb9_A Similarities with proba 98.3 3.5E-06 1.2E-10 83.2 11.6 34 53-89 3-36 (412)
170 2pyx_A Tryptophan halogenase; 98.3 2.5E-06 8.5E-11 87.5 10.9 53 236-289 181-234 (526)
171 3ics_A Coenzyme A-disulfide re 98.3 1E-06 3.5E-11 91.8 7.9 97 51-175 187-283 (588)
172 1ebd_A E3BD, dihydrolipoamide 98.3 6.4E-07 2.2E-11 90.2 6.2 98 50-175 169-271 (455)
173 2wpf_A Trypanothione reductase 98.3 1.1E-06 3.6E-11 89.5 7.7 98 50-175 190-293 (495)
174 1fec_A Trypanothione reductase 98.3 1.2E-06 4E-11 89.1 7.6 99 50-176 186-290 (490)
175 1q1r_A Putidaredoxin reductase 98.3 1.5E-06 5.2E-11 86.8 8.1 99 50-175 148-251 (431)
176 1mo9_A ORF3; nucleotide bindin 98.2 1.4E-06 4.8E-11 89.3 7.9 97 52-176 215-318 (523)
177 2aqj_A Tryptophan halogenase, 98.2 7.5E-07 2.6E-11 91.7 5.9 45 130-175 175-223 (538)
178 4b1b_A TRXR, thioredoxin reduc 98.2 1.8E-06 6.1E-11 88.4 8.6 98 49-175 221-320 (542)
179 1ojt_A Surface protein; redox- 98.2 8.1E-07 2.8E-11 90.2 5.8 99 50-176 184-288 (482)
180 2weu_A Tryptophan 5-halogenase 98.2 3E-06 1E-10 86.6 10.0 53 236-289 179-231 (511)
181 1kf6_A Fumarate reductase flav 98.2 9.8E-07 3.4E-11 91.8 6.4 37 51-88 5-41 (602)
182 1v59_A Dihydrolipoamide dehydr 98.2 1.2E-06 4E-11 88.8 6.7 98 51-176 183-289 (478)
183 1zmd_A Dihydrolipoyl dehydroge 98.2 1.6E-06 5.4E-11 87.8 7.3 98 51-175 178-283 (474)
184 1xdi_A RV3303C-LPDA; reductase 98.2 2.1E-06 7.2E-11 87.5 8.1 99 50-176 181-281 (499)
185 2a8x_A Dihydrolipoyl dehydroge 98.2 1.6E-06 5.6E-11 87.4 6.9 98 50-175 170-272 (464)
186 2qcu_A Aerobic glycerol-3-phos 98.2 2E-06 6.9E-11 87.6 7.5 35 50-87 2-36 (501)
187 2bc0_A NADH oxidase; flavoprot 98.2 2.5E-06 8.7E-11 86.7 8.2 99 49-175 192-292 (490)
188 2qae_A Lipoamide, dihydrolipoy 98.2 2.4E-06 8.1E-11 86.4 7.5 98 50-175 173-277 (468)
189 3sx6_A Sulfide-quinone reducta 98.2 6.8E-06 2.3E-10 82.2 10.7 82 208-294 5-118 (437)
190 3hyw_A Sulfide-quinone reducta 98.2 3.6E-06 1.2E-10 84.0 8.5 77 208-289 3-110 (430)
191 2dkh_A 3-hydroxybenzoate hydro 98.2 1.5E-06 5.1E-11 91.3 5.9 37 50-89 31-68 (639)
192 3c4n_A Uncharacterized protein 98.2 7E-07 2.4E-11 88.5 3.2 35 50-87 35-71 (405)
193 3iwa_A FAD-dependent pyridine 98.2 2.3E-06 7.9E-11 86.5 7.0 98 51-175 159-259 (472)
194 3oc4_A Oxidoreductase, pyridin 98.1 4.9E-06 1.7E-10 83.6 9.1 97 51-175 147-245 (452)
195 3nlc_A Uncharacterized protein 98.1 7.2E-06 2.4E-10 83.9 10.2 61 238-299 228-290 (549)
196 1dxl_A Dihydrolipoamide dehydr 98.1 1.9E-06 6.6E-11 87.1 5.9 98 50-175 176-280 (470)
197 3jsk_A Cypbp37 protein; octame 98.1 1.2E-06 4.2E-11 83.7 4.1 38 50-90 78-117 (344)
198 3o0h_A Glutathione reductase; 98.1 3.6E-06 1.2E-10 85.4 7.8 98 50-175 190-289 (484)
199 2cdu_A NADPH oxidase; flavoenz 98.1 3.3E-06 1.1E-10 84.9 7.5 99 50-175 148-248 (452)
200 3ntd_A FAD-dependent pyridine 98.1 3.2E-06 1.1E-10 87.5 7.5 97 51-175 151-268 (565)
201 3cgb_A Pyridine nucleotide-dis 98.1 2.9E-06 9.9E-11 86.0 6.8 97 50-175 185-283 (480)
202 2gjc_A Thiazole biosynthetic e 98.1 3.8E-05 1.3E-09 72.9 13.9 37 50-89 64-102 (326)
203 2r0c_A REBC; flavin adenine di 98.1 3.7E-06 1.2E-10 86.7 7.2 37 50-89 25-61 (549)
204 1zk7_A HGII, reductase, mercur 98.1 4.5E-06 1.6E-10 84.2 7.7 96 50-175 175-272 (467)
205 4a9w_A Monooxygenase; baeyer-v 98.1 2.2E-05 7.5E-10 75.7 11.9 78 208-287 4-131 (357)
206 3da1_A Glycerol-3-phosphate de 98.1 6.7E-06 2.3E-10 84.9 8.6 36 49-87 16-51 (561)
207 3ic9_A Dihydrolipoamide dehydr 98.1 4.8E-06 1.6E-10 84.7 7.4 97 50-175 173-275 (492)
208 3d1c_A Flavin-containing putat 98.1 5.3E-06 1.8E-10 80.7 7.3 104 51-175 166-273 (369)
209 3vrd_B FCCB subunit, flavocyto 98.1 1.5E-05 5E-10 78.7 10.5 82 207-293 2-113 (401)
210 4at0_A 3-ketosteroid-delta4-5a 98.1 8.6E-06 2.9E-10 83.2 9.1 37 50-89 40-76 (510)
211 4dna_A Probable glutathione re 98.1 5.9E-06 2E-10 83.3 7.8 97 50-175 169-269 (463)
212 1chu_A Protein (L-aspartate ox 98.1 1.5E-05 5E-10 81.9 10.8 36 50-89 7-42 (540)
213 3h8l_A NADH oxidase; membrane 98.1 9E-06 3.1E-10 80.5 8.9 79 208-291 2-116 (409)
214 1pj5_A N,N-dimethylglycine oxi 98.0 4.8E-06 1.6E-10 90.2 7.3 45 129-174 160-207 (830)
215 1trb_A Thioredoxin reductase; 98.0 5.8E-06 2E-10 78.8 7.1 96 50-175 144-248 (320)
216 3lad_A Dihydrolipoamide dehydr 98.0 6.1E-06 2.1E-10 83.5 7.6 99 50-176 179-282 (476)
217 1m6i_A Programmed cell death p 98.0 6.6E-06 2.3E-10 83.6 7.5 101 51-175 180-283 (493)
218 1fl2_A Alkyl hydroperoxide red 98.0 1.6E-05 5.4E-10 75.3 9.6 82 209-290 3-117 (310)
219 3cty_A Thioredoxin reductase; 98.0 8.2E-06 2.8E-10 77.8 7.2 91 51-175 155-253 (319)
220 3lzw_A Ferredoxin--NADP reduct 98.0 1.6E-05 5.5E-10 75.9 9.3 82 208-291 8-129 (332)
221 2zbw_A Thioredoxin reductase; 98.0 5.8E-06 2E-10 79.3 6.1 96 50-175 151-253 (335)
222 3urh_A Dihydrolipoyl dehydroge 98.0 9.1E-06 3.1E-10 82.6 7.8 98 50-175 197-301 (491)
223 3dgh_A TRXR-1, thioredoxin red 98.0 5.9E-06 2E-10 83.8 6.4 97 50-175 186-290 (483)
224 3dk9_A Grase, GR, glutathione 98.0 6.5E-06 2.2E-10 83.4 6.6 99 50-176 186-295 (478)
225 3nix_A Flavoprotein/dehydrogen 98.0 1.6E-05 5.4E-10 79.0 9.3 81 208-288 6-166 (421)
226 4ap3_A Steroid monooxygenase; 98.0 6.7E-05 2.3E-09 77.1 14.0 85 207-291 21-164 (549)
227 3fbs_A Oxidoreductase; structu 98.0 1.5E-05 5.1E-10 74.8 8.5 81 208-291 3-115 (297)
228 2q7v_A Thioredoxin reductase; 98.0 8.7E-06 3E-10 77.8 6.9 91 51-175 152-250 (325)
229 3h28_A Sulfide-quinone reducta 98.0 1.6E-05 5.5E-10 79.3 8.9 79 208-291 3-112 (430)
230 3oz2_A Digeranylgeranylglycero 98.0 3.9E-05 1.3E-09 75.0 11.6 79 209-288 6-162 (397)
231 3itj_A Thioredoxin reductase 1 98.0 1.1E-05 3.9E-10 77.2 7.5 92 50-175 172-272 (338)
232 3dgz_A Thioredoxin reductase 2 98.0 1.1E-05 3.8E-10 81.9 7.6 97 50-175 184-288 (488)
233 3kd9_A Coenzyme A disulfide re 98.0 9.3E-06 3.2E-10 81.5 6.9 98 50-175 147-245 (449)
234 3r9u_A Thioredoxin reductase; 98.0 1.1E-05 3.9E-10 76.3 7.2 93 50-175 146-245 (315)
235 2a87_A TRXR, TR, thioredoxin r 98.0 1.9E-05 6.4E-10 75.9 8.7 92 50-175 154-253 (335)
236 2q0l_A TRXR, thioredoxin reduc 97.9 1.4E-05 4.8E-10 75.7 7.7 92 50-175 142-242 (311)
237 1vdc_A NTR, NADPH dependent th 97.9 1.5E-05 5E-10 76.5 7.2 92 50-175 158-260 (333)
238 3ab1_A Ferredoxin--NADP reduct 97.9 5.3E-05 1.8E-09 73.5 11.2 80 207-287 14-130 (360)
239 3v76_A Flavoprotein; structura 97.9 3E-05 1E-09 76.8 9.5 81 206-289 26-188 (417)
240 2wdq_A Succinate dehydrogenase 97.9 1.7E-05 5.7E-10 82.3 7.9 35 51-88 7-41 (588)
241 3f8d_A Thioredoxin reductase ( 97.9 3.6E-05 1.2E-09 73.1 9.4 81 208-291 16-128 (323)
242 2h88_A Succinate dehydrogenase 97.9 1.8E-05 6.1E-10 82.4 7.6 34 51-87 18-51 (621)
243 3gwf_A Cyclohexanone monooxyge 97.9 0.00011 3.6E-09 75.4 12.8 83 208-290 9-151 (540)
244 4g6h_A Rotenone-insensitive NA 97.8 1.5E-05 5E-10 81.1 5.8 99 52-175 218-333 (502)
245 1pn0_A Phenol 2-monooxygenase; 97.8 9.4E-06 3.2E-10 85.5 4.4 36 51-89 8-48 (665)
246 1hyu_A AHPF, alkyl hydroperoxi 97.8 5.4E-05 1.9E-09 77.4 9.6 84 207-290 212-328 (521)
247 3qfa_A Thioredoxin reductase 1 97.8 3.6E-05 1.2E-09 78.7 8.0 97 50-175 209-316 (519)
248 4fk1_A Putative thioredoxin re 97.8 6.1E-05 2.1E-09 71.2 9.1 81 209-291 8-120 (304)
249 4gut_A Lysine-specific histone 97.8 0.0001 3.4E-09 78.7 11.6 38 49-89 334-371 (776)
250 4hb9_A Similarities with proba 97.8 6.8E-05 2.3E-09 73.8 9.8 46 243-289 122-167 (412)
251 3l8k_A Dihydrolipoyl dehydroge 97.8 2.4E-05 8.1E-10 78.9 6.4 96 50-176 171-274 (466)
252 2x3n_A Probable FAD-dependent 97.8 8.4E-05 2.9E-09 73.1 10.3 81 208-289 7-167 (399)
253 3alj_A 2-methyl-3-hydroxypyrid 97.8 0.00011 3.9E-09 71.7 11.0 78 207-289 11-161 (379)
254 2i0z_A NAD(FAD)-utilizing dehy 97.8 0.0001 3.4E-09 73.9 10.7 49 239-288 143-191 (447)
255 2gv8_A Monooxygenase; FMO, FAD 97.8 4.9E-05 1.7E-09 76.1 8.2 81 50-175 211-293 (447)
256 3dme_A Conserved exported prot 97.7 8.2E-05 2.8E-09 72.0 9.3 59 238-298 158-219 (369)
257 3s5w_A L-ornithine 5-monooxyge 97.7 4.4E-05 1.5E-09 76.8 7.6 122 50-175 226-378 (463)
258 4gde_A UDP-galactopyranose mut 97.7 1.6E-05 5.4E-10 81.1 4.2 47 236-286 228-274 (513)
259 3uox_A Otemo; baeyer-villiger 97.7 6.2E-05 2.1E-09 77.3 8.2 83 208-290 10-151 (545)
260 3i6d_A Protoporphyrinogen oxid 97.7 1.5E-05 5.3E-10 80.1 3.5 41 245-287 248-288 (470)
261 1qo8_A Flavocytochrome C3 fuma 97.7 8.3E-05 2.8E-09 76.9 9.1 50 240-289 260-313 (566)
262 2x8g_A Thioredoxin glutathione 97.7 6E-05 2.1E-09 78.5 8.0 97 50-175 285-396 (598)
263 3k30_A Histamine dehydrogenase 97.7 3.5E-05 1.2E-09 81.7 6.2 99 50-175 522-625 (690)
264 3cgv_A Geranylgeranyl reductas 97.7 9.8E-05 3.4E-09 72.4 8.9 80 208-288 5-162 (397)
265 3ihm_A Styrene monooxygenase A 97.6 2.9E-05 1E-09 77.4 4.7 36 49-87 20-55 (430)
266 3i3l_A Alkylhalidase CMLS; fla 97.6 0.00015 5.2E-09 75.0 9.9 81 207-288 23-188 (591)
267 1c0p_A D-amino acid oxidase; a 97.6 4.3E-05 1.5E-09 74.2 5.5 36 49-87 4-39 (363)
268 3e1t_A Halogenase; flavoprotei 97.6 0.00021 7.1E-09 72.9 10.6 81 208-289 8-173 (512)
269 1k0i_A P-hydroxybenzoate hydro 97.6 0.00017 5.8E-09 70.7 9.7 82 208-290 3-165 (394)
270 3nks_A Protoporphyrinogen oxid 97.6 4.8E-05 1.6E-09 76.8 5.4 51 235-287 239-289 (477)
271 2b9w_A Putative aminooxidase; 97.6 6.3E-05 2.2E-09 74.7 6.2 40 49-91 4-44 (424)
272 1yvv_A Amine oxidase, flavin-c 97.6 0.00024 8.1E-09 67.9 9.7 44 244-289 119-163 (336)
273 2e1m_A L-glutamate oxidase; L- 97.6 7.5E-05 2.6E-09 72.6 6.0 42 46-90 39-81 (376)
274 1ps9_A 2,4-dienoyl-COA reducta 97.6 0.00012 4.1E-09 77.3 8.0 48 127-175 580-629 (671)
275 2bcg_G Secretory pathway GDP d 97.6 7.2E-05 2.5E-09 75.1 6.0 54 235-289 247-301 (453)
276 1rsg_A FMS1 protein; FAD bindi 97.6 4.1E-05 1.4E-09 78.2 4.2 40 49-91 6-46 (516)
277 2zxi_A TRNA uridine 5-carboxym 97.5 0.00029 9.8E-09 72.6 10.3 82 207-290 27-182 (637)
278 2xve_A Flavin-containing monoo 97.5 0.00083 2.8E-08 67.5 13.6 84 208-291 3-171 (464)
279 2vou_A 2,6-dihydroxypyridine h 97.5 0.00035 1.2E-08 68.6 10.6 81 207-289 5-154 (397)
280 2yg5_A Putrescine oxidase; oxi 97.5 4.6E-05 1.6E-09 76.4 4.1 38 50-90 4-41 (453)
281 3atr_A Conserved archaeal prot 97.5 0.00025 8.7E-09 71.0 9.5 82 208-290 7-164 (453)
282 1v0j_A UDP-galactopyranose mut 97.5 8.4E-05 2.9E-09 73.3 5.8 38 50-90 6-44 (399)
283 3ces_A MNMG, tRNA uridine 5-ca 97.5 0.00026 9E-09 73.2 9.6 80 208-289 29-182 (651)
284 1w4x_A Phenylacetone monooxyge 97.5 0.0007 2.4E-08 69.5 12.8 80 208-287 17-153 (542)
285 3qj4_A Renalase; FAD/NAD(P)-bi 97.5 0.00031 1.1E-08 67.5 9.5 42 243-286 122-163 (342)
286 4a5l_A Thioredoxin reductase; 97.5 0.00029 9.9E-09 66.6 8.9 83 208-293 5-126 (314)
287 3rp8_A Flavoprotein monooxygen 97.5 0.00028 9.6E-09 69.6 8.9 81 206-290 22-183 (407)
288 2xag_A Lysine-specific histone 97.5 4.9E-05 1.7E-09 81.7 3.6 80 5-91 223-315 (852)
289 2jae_A L-amino acid oxidase; o 97.5 0.00011 3.8E-09 74.4 6.0 40 49-91 9-48 (489)
290 2gqf_A Hypothetical protein HI 97.4 0.00045 1.5E-08 68.0 10.0 49 239-289 118-169 (401)
291 3hdq_A UDP-galactopyranose mut 97.4 0.00012 4E-09 71.8 5.7 40 48-90 26-65 (397)
292 1y56_B Sarcosine oxidase; dehy 97.4 0.00052 1.8E-08 66.9 10.3 49 239-289 158-206 (382)
293 3fmw_A Oxygenase; mithramycin, 97.4 0.00022 7.5E-09 73.6 7.8 79 208-288 50-207 (570)
294 3lov_A Protoporphyrinogen oxid 97.4 0.00012 4E-09 73.9 5.5 40 50-90 3-42 (475)
295 4gcm_A TRXR, thioredoxin reduc 97.4 0.00048 1.6E-08 65.1 9.4 81 209-293 8-121 (312)
296 3ps9_A TRNA 5-methylaminomethy 97.4 0.00057 1.9E-08 72.2 10.6 47 240-288 427-473 (676)
297 3nyc_A D-arginine dehydrogenas 97.4 0.00032 1.1E-08 68.2 8.0 49 237-288 161-209 (381)
298 2vdc_G Glutamate synthase [NAD 97.4 0.00016 5.5E-09 72.5 5.9 96 49-175 262-379 (456)
299 1y0p_A Fumarate reductase flav 97.4 0.00073 2.5E-08 69.8 10.8 48 241-288 266-317 (571)
300 3cp8_A TRNA uridine 5-carboxym 97.4 0.00061 2.1E-08 70.4 10.0 82 206-289 20-175 (641)
301 2ivd_A PPO, PPOX, protoporphyr 97.4 0.00013 4.5E-09 73.6 5.0 39 49-90 14-52 (478)
302 2gag_A Heterotetrameric sarcos 97.3 0.0002 6.8E-09 78.6 6.2 88 51-175 284-384 (965)
303 4dsg_A UDP-galactopyranose mut 97.3 0.0002 6.7E-09 72.5 5.7 40 49-90 7-46 (484)
304 3c4a_A Probable tryptophan hyd 97.3 0.00017 5.8E-09 70.5 5.0 35 52-89 1-37 (381)
305 1d4d_A Flavocytochrome C fumar 97.3 0.0011 3.9E-08 68.3 11.4 50 240-289 265-318 (572)
306 1sez_A Protoporphyrinogen oxid 97.3 0.00019 6.4E-09 73.0 5.2 38 50-90 12-49 (504)
307 1o94_A Tmadh, trimethylamine d 97.3 0.00023 7.9E-09 75.7 5.9 98 50-175 527-647 (729)
308 2qa2_A CABE, polyketide oxygen 97.3 0.00095 3.3E-08 67.7 10.2 81 206-288 11-166 (499)
309 2z3y_A Lysine-specific histone 97.2 0.0001 3.5E-09 77.6 2.9 40 48-90 104-143 (662)
310 2iid_A L-amino-acid oxidase; f 97.2 0.00025 8.6E-09 71.9 5.6 40 48-90 30-69 (498)
311 2gmh_A Electron transfer flavo 97.2 0.0013 4.4E-08 68.1 11.0 50 240-289 154-218 (584)
312 3g5s_A Methylenetetrahydrofola 97.2 0.00029 1E-08 67.9 5.5 35 51-88 1-35 (443)
313 2bi7_A UDP-galactopyranose mut 97.2 0.00024 8.3E-09 69.5 5.1 37 51-90 3-39 (384)
314 2vvm_A Monoamine oxidase N; FA 97.2 0.00022 7.5E-09 72.3 4.9 51 235-287 260-311 (495)
315 2xdo_A TETX2 protein; tetracyc 97.2 0.0013 4.3E-08 64.7 10.2 83 206-290 25-184 (398)
316 1i8t_A UDP-galactopyranose mut 97.2 0.00023 7.9E-09 69.2 4.6 36 52-90 2-37 (367)
317 3g3e_A D-amino-acid oxidase; F 97.2 0.0002 6.9E-09 69.1 3.9 35 53-87 2-39 (351)
318 2qa1_A PGAE, polyketide oxygen 97.2 0.001 3.6E-08 67.4 9.1 82 205-288 9-165 (500)
319 2gag_B Heterotetrameric sarcos 97.2 0.0013 4.6E-08 64.4 9.7 48 240-289 184-231 (405)
320 1ryi_A Glycine oxidase; flavop 97.1 0.001 3.5E-08 64.7 8.4 54 240-297 174-227 (382)
321 3ihg_A RDME; flavoenzyme, anth 97.1 0.0013 4.4E-08 67.4 9.2 50 238-288 128-183 (535)
322 2bs2_A Quinol-fumarate reducta 97.1 0.00029 9.9E-09 73.8 4.1 35 51-88 5-39 (660)
323 1d5t_A Guanine nucleotide diss 97.1 0.00055 1.9E-08 68.1 5.8 53 235-289 239-291 (433)
324 3p1w_A Rabgdi protein; GDI RAB 97.0 0.00059 2E-08 68.3 5.1 53 235-287 261-313 (475)
325 2gf3_A MSOX, monomeric sarcosi 97.0 0.0023 7.8E-08 62.4 9.2 56 238-297 158-213 (389)
326 2aqj_A Tryptophan halogenase, 97.0 0.0052 1.8E-07 62.9 12.2 47 243-290 178-224 (538)
327 3c96_A Flavin-containing monoo 96.9 0.0015 5.2E-08 64.4 7.9 80 207-289 4-170 (410)
328 1pj5_A N,N-dimethylglycine oxi 96.9 0.0027 9.1E-08 68.7 10.4 49 238-288 159-207 (830)
329 2rgh_A Alpha-glycerophosphate 96.9 0.00067 2.3E-08 70.0 5.2 51 237-288 195-250 (571)
330 1gte_A Dihydropyrimidine dehyd 96.9 0.0014 4.6E-08 72.5 7.9 93 51-174 332-442 (1025)
331 3gyx_A Adenylylsulfate reducta 96.9 0.00052 1.8E-08 71.9 4.0 36 50-88 21-62 (662)
332 3da1_A Glycerol-3-phosphate de 96.8 0.0021 7.3E-08 66.1 8.2 49 239-288 179-232 (561)
333 4at0_A 3-ketosteroid-delta4-5a 96.8 0.0039 1.3E-07 63.3 10.0 49 240-288 212-264 (510)
334 2uzz_A N-methyl-L-tryptophan o 96.8 0.0041 1.4E-07 60.2 9.7 46 240-288 159-204 (372)
335 3jsk_A Cypbp37 protein; octame 96.8 0.0034 1.1E-07 59.9 8.8 120 207-326 79-304 (344)
336 1jnr_A Adenylylsulfate reducta 96.7 0.001 3.5E-08 69.6 4.9 36 50-88 21-60 (643)
337 1lqt_A FPRA; NADP+ derivative, 96.7 0.0014 4.9E-08 65.5 5.1 44 133-176 265-328 (456)
338 1b37_A Protein (polyamine oxid 96.6 0.0019 6.4E-08 65.0 5.5 41 244-286 228-268 (472)
339 1kdg_A CDH, cellobiose dehydro 96.6 0.0016 5.5E-08 66.8 5.0 58 241-299 207-272 (546)
340 2oln_A NIKD protein; flavoprot 96.6 0.0061 2.1E-07 59.6 8.9 54 240-297 163-216 (397)
341 1y56_A Hypothetical protein PH 96.5 0.0017 5.9E-08 65.7 4.6 83 207-291 108-222 (493)
342 2wdq_A Succinate dehydrogenase 96.5 0.012 4.2E-07 60.8 10.9 50 238-287 151-205 (588)
343 4gde_A UDP-galactopyranose mut 96.5 0.0024 8.4E-08 64.7 5.5 27 208-234 11-38 (513)
344 3ayj_A Pro-enzyme of L-phenyla 96.3 0.0016 5.5E-08 68.2 3.3 39 51-89 56-100 (721)
345 2dkh_A 3-hydroxybenzoate hydro 96.3 0.0064 2.2E-07 63.6 7.7 51 238-288 149-211 (639)
346 1cjc_A Protein (adrenodoxin re 96.3 0.0012 4.1E-08 66.2 1.8 72 206-288 5-106 (460)
347 1ju2_A HydroxynitrIle lyase; f 96.3 0.0016 5.5E-08 66.6 2.7 59 240-298 204-271 (536)
348 3t37_A Probable dehydrogenase; 96.2 0.0025 8.5E-08 65.0 3.9 60 239-299 220-282 (526)
349 3q9t_A Choline dehydrogenase a 96.2 0.0029 1E-07 65.1 4.2 58 241-298 217-280 (577)
350 1chu_A Protein (L-aspartate ox 96.1 0.019 6.4E-07 58.7 9.7 45 243-287 152-207 (540)
351 2rgh_A Alpha-glycerophosphate 96.1 0.03 1E-06 57.6 11.1 29 206-234 31-59 (571)
352 3c4n_A Uncharacterized protein 95.9 0.0099 3.4E-07 58.4 6.3 54 241-298 183-246 (405)
353 3qvp_A Glucose oxidase; oxidor 95.9 0.0048 1.6E-07 63.5 4.1 60 239-298 236-303 (583)
354 2qcu_A Aerobic glycerol-3-phos 95.9 0.028 9.5E-07 56.9 9.7 47 241-289 160-211 (501)
355 1kf6_A Fumarate reductase flav 95.9 0.019 6.6E-07 59.4 8.6 45 242-287 146-196 (602)
356 1n4w_A CHOD, cholesterol oxida 95.8 0.0062 2.1E-07 61.7 4.7 59 239-297 230-297 (504)
357 2r0c_A REBC; flavin adenine di 95.8 0.031 1.1E-06 57.2 9.9 27 208-234 27-53 (549)
358 2e5v_A L-aspartate oxidase; ar 95.8 0.026 8.9E-07 56.6 9.0 47 241-289 130-177 (472)
359 1coy_A Cholesterol oxidase; ox 95.8 0.0078 2.7E-07 61.1 5.1 57 241-297 238-302 (507)
360 2h88_A Succinate dehydrogenase 95.7 0.033 1.1E-06 57.8 9.6 46 242-288 167-217 (621)
361 1gpe_A Protein (glucose oxidas 95.5 0.009 3.1E-07 61.7 4.6 59 240-298 241-307 (587)
362 1pn0_A Phenol 2-monooxygenase; 95.5 0.03 1E-06 58.7 8.7 27 208-234 9-40 (665)
363 2jbv_A Choline oxidase; alcoho 95.5 0.0087 3E-07 61.3 4.3 58 241-298 220-283 (546)
364 3fim_B ARYL-alcohol oxidase; A 95.4 0.0061 2.1E-07 62.5 2.7 63 236-298 214-286 (566)
365 2bs2_A Quinol-fumarate reducta 95.3 0.08 2.7E-06 55.3 10.9 48 240-288 168-220 (660)
366 3fwz_A Inner membrane protein 95.2 0.025 8.4E-07 46.4 5.2 37 48-87 4-40 (140)
367 4gut_A Lysine-specific histone 95.0 0.075 2.6E-06 56.6 9.7 41 244-286 543-583 (776)
368 3i6d_A Protoporphyrinogen oxid 95.0 0.064 2.2E-06 53.3 8.7 28 207-234 5-38 (470)
369 4b63_A L-ornithine N5 monooxyg 94.9 0.026 9E-07 57.0 5.6 50 242-291 157-217 (501)
370 1jnr_A Adenylylsulfate reducta 94.8 0.095 3.3E-06 54.7 9.8 46 242-287 163-217 (643)
371 3lk7_A UDP-N-acetylmuramoylala 94.6 0.017 5.9E-07 57.5 3.4 72 206-293 8-89 (451)
372 1id1_A Putative potassium chan 94.6 0.046 1.6E-06 45.4 5.6 34 50-86 2-35 (153)
373 3llv_A Exopolyphosphatase-rela 94.4 0.037 1.3E-06 45.2 4.5 34 51-87 6-39 (141)
374 3p1w_A Rabgdi protein; GDI RAB 94.4 0.051 1.7E-06 54.2 6.2 41 48-91 17-57 (475)
375 3eag_A UDP-N-acetylmuramate:L- 94.4 0.035 1.2E-06 52.7 4.8 73 206-294 3-84 (326)
376 2g1u_A Hypothetical protein TM 94.3 0.047 1.6E-06 45.5 5.0 37 48-87 16-52 (155)
377 3dje_A Fructosyl amine: oxygen 94.1 0.069 2.4E-06 52.7 6.6 52 236-288 167-221 (438)
378 3dfz_A SIRC, precorrin-2 dehyd 93.8 0.072 2.4E-06 47.3 5.3 99 206-325 30-141 (223)
379 1vg0_A RAB proteins geranylger 93.8 0.072 2.5E-06 55.1 6.0 55 235-289 383-438 (650)
380 3gyx_A Adenylylsulfate reducta 93.7 0.14 4.7E-06 53.5 8.1 43 244-286 182-231 (662)
381 3ic5_A Putative saccharopine d 93.6 0.062 2.1E-06 42.0 4.2 33 51-86 5-38 (118)
382 3dfz_A SIRC, precorrin-2 dehyd 93.2 0.087 3E-06 46.8 4.8 37 48-87 28-64 (223)
383 1lss_A TRK system potassium up 92.9 0.11 3.8E-06 41.9 4.7 32 52-86 5-36 (140)
384 2hmt_A YUAA protein; RCK, KTN, 92.6 0.12 4E-06 42.0 4.5 33 51-86 6-38 (144)
385 4ffl_A PYLC; amino acid, biosy 92.1 0.15 5.3E-06 48.9 5.4 37 51-90 1-37 (363)
386 3i83_A 2-dehydropantoate 2-red 92.0 0.44 1.5E-05 44.8 8.4 81 208-296 3-91 (320)
387 3c85_A Putative glutathione-re 91.9 0.16 5.6E-06 43.4 4.8 36 49-87 37-73 (183)
388 3kkj_A Amine oxidase, flavin-c 91.9 0.12 3.9E-06 46.6 4.0 29 209-237 4-32 (336)
389 2x5o_A UDP-N-acetylmuramoylala 91.8 0.13 4.3E-06 51.0 4.5 35 51-88 5-39 (439)
390 4hv4_A UDP-N-acetylmuramate--L 91.8 0.096 3.3E-06 52.7 3.6 70 205-292 20-97 (494)
391 1kyq_A Met8P, siroheme biosynt 91.5 0.092 3.2E-06 48.2 2.9 36 49-87 11-46 (274)
392 3lk7_A UDP-N-acetylmuramoylala 91.3 0.18 6.3E-06 50.0 5.0 132 49-233 7-141 (451)
393 1f0y_A HCDH, L-3-hydroxyacyl-C 90.7 0.29 9.9E-06 45.6 5.5 38 47-87 11-48 (302)
394 3hn7_A UDP-N-acetylmuramate-L- 90.3 0.22 7.5E-06 50.5 4.6 72 205-293 17-97 (524)
395 1jw9_B Molybdopterin biosynthe 89.7 0.33 1.1E-05 43.9 4.8 36 51-88 31-66 (249)
396 1vl6_A Malate oxidoreductase; 89.6 0.33 1.1E-05 46.5 4.9 38 48-87 189-226 (388)
397 3l4b_C TRKA K+ channel protien 89.6 0.26 8.9E-06 43.4 4.0 32 53-87 2-33 (218)
398 2a9f_A Putative malic enzyme ( 89.6 0.33 1.1E-05 46.6 4.8 38 48-87 185-222 (398)
399 4e12_A Diketoreductase; oxidor 88.9 0.48 1.6E-05 43.7 5.4 35 50-87 3-37 (283)
400 4dio_A NAD(P) transhydrogenase 88.8 0.47 1.6E-05 46.0 5.3 35 50-87 189-223 (405)
401 2x5o_A UDP-N-acetylmuramoylala 88.7 0.094 3.2E-06 52.0 0.4 70 206-293 4-81 (439)
402 3hwr_A 2-dehydropantoate 2-red 88.7 0.81 2.8E-05 42.9 7.0 76 205-288 17-98 (318)
403 3eag_A UDP-N-acetylmuramate:L- 88.5 0.47 1.6E-05 44.8 5.2 35 50-87 3-38 (326)
404 1y6j_A L-lactate dehydrogenase 88.4 0.53 1.8E-05 44.2 5.4 37 50-87 6-42 (318)
405 3hn2_A 2-dehydropantoate 2-red 88.3 0.56 1.9E-05 43.9 5.5 81 208-295 3-88 (312)
406 3rui_A Ubiquitin-like modifier 88.3 0.53 1.8E-05 44.4 5.3 37 50-88 33-69 (340)
407 3tl2_A Malate dehydrogenase; c 88.3 0.58 2E-05 43.9 5.5 37 48-86 5-41 (315)
408 3p2y_A Alanine dehydrogenase/p 87.9 0.48 1.6E-05 45.5 4.8 35 50-87 183-217 (381)
409 3fwz_A Inner membrane protein 87.9 0.83 2.8E-05 37.0 5.7 71 207-288 7-83 (140)
410 3fpz_A Thiazole biosynthetic e 87.8 0.48 1.7E-05 44.5 4.8 46 207-252 65-138 (326)
411 2vvm_A Monoamine oxidase N; FA 87.6 0.72 2.5E-05 46.1 6.2 37 52-91 40-76 (495)
412 2bcg_G Secretory pathway GDP d 87.6 0.63 2.1E-05 46.1 5.6 40 49-91 9-48 (453)
413 1zud_1 Adenylyltransferase THI 87.5 0.54 1.8E-05 42.5 4.7 37 50-88 27-63 (251)
414 3pqe_A L-LDH, L-lactate dehydr 87.5 0.67 2.3E-05 43.7 5.5 37 49-86 3-39 (326)
415 3h8v_A Ubiquitin-like modifier 87.4 0.51 1.7E-05 43.6 4.5 37 50-88 35-71 (292)
416 1pjq_A CYSG, siroheme synthase 87.3 0.46 1.6E-05 47.2 4.4 35 50-87 11-45 (457)
417 3nrn_A Uncharacterized protein 87.2 0.92 3.1E-05 44.2 6.6 44 130-173 199-242 (421)
418 3i83_A 2-dehydropantoate 2-red 87.2 0.62 2.1E-05 43.8 5.1 32 52-86 3-34 (320)
419 3d0o_A L-LDH 1, L-lactate dehy 87.0 0.72 2.5E-05 43.3 5.4 36 50-86 5-40 (317)
420 1vg0_A RAB proteins geranylger 87.0 1.2 4.1E-05 46.0 7.4 39 49-90 6-44 (650)
421 1pzg_A LDH, lactate dehydrogen 86.9 0.8 2.8E-05 43.3 5.7 36 50-87 8-43 (331)
422 3gpi_A NAD-dependent epimerase 86.7 0.77 2.6E-05 42.0 5.4 34 51-87 3-36 (286)
423 3gvi_A Malate dehydrogenase; N 86.5 0.82 2.8E-05 43.0 5.5 37 49-87 5-41 (324)
424 3ego_A Probable 2-dehydropanto 86.5 1.2 4.1E-05 41.5 6.6 66 209-284 4-75 (307)
425 3q2o_A Phosphoribosylaminoimid 86.5 1.1 3.6E-05 43.4 6.5 38 49-89 12-49 (389)
426 3t37_A Probable dehydrogenase; 86.3 0.81 2.8E-05 46.2 5.8 26 208-233 18-44 (526)
427 1pjq_A CYSG, siroheme synthase 86.2 0.6 2E-05 46.3 4.6 70 206-292 11-89 (457)
428 1x13_A NAD(P) transhydrogenase 86.2 0.73 2.5E-05 44.8 5.1 34 51-87 172-205 (401)
429 3llv_A Exopolyphosphatase-rela 86.1 1.1 3.9E-05 36.0 5.5 43 207-249 6-54 (141)
430 3hn2_A 2-dehydropantoate 2-red 86.0 0.65 2.2E-05 43.4 4.6 32 52-86 3-34 (312)
431 1ldn_A L-lactate dehydrogenase 86.0 0.92 3.2E-05 42.5 5.6 36 50-86 5-40 (316)
432 1d5t_A Guanine nucleotide diss 85.9 0.47 1.6E-05 46.7 3.7 39 50-91 5-43 (433)
433 3k96_A Glycerol-3-phosphate de 85.8 0.85 2.9E-05 43.6 5.3 38 47-87 25-62 (356)
434 3fi9_A Malate dehydrogenase; s 85.6 0.94 3.2E-05 42.9 5.4 36 50-86 7-43 (343)
435 3ghy_A Ketopantoate reductase 85.6 0.91 3.1E-05 42.9 5.4 31 52-85 4-34 (335)
436 3orq_A N5-carboxyaminoimidazol 85.5 1.2 4.2E-05 42.8 6.4 38 49-89 10-47 (377)
437 2dpo_A L-gulonate 3-dehydrogen 85.5 0.73 2.5E-05 43.3 4.6 35 50-87 5-39 (319)
438 1l7d_A Nicotinamide nucleotide 85.5 0.9 3.1E-05 43.9 5.4 35 50-87 171-205 (384)
439 3ghy_A Ketopantoate reductase 85.2 1.1 3.8E-05 42.3 5.8 72 208-287 4-81 (335)
440 1kjq_A GART 2, phosphoribosylg 85.1 0.94 3.2E-05 43.7 5.3 40 46-88 6-45 (391)
441 3ado_A Lambda-crystallin; L-gu 85.0 0.81 2.8E-05 42.9 4.6 34 51-87 6-39 (319)
442 2ew2_A 2-dehydropantoate 2-red 85.0 0.89 3.1E-05 42.2 5.0 32 52-86 4-35 (316)
443 3h5n_A MCCB protein; ubiquitin 84.9 0.83 2.8E-05 43.6 4.7 37 50-88 117-153 (353)
444 1bg6_A N-(1-D-carboxylethyl)-L 84.9 0.92 3.1E-05 43.1 5.1 32 52-86 5-36 (359)
445 2ew2_A 2-dehydropantoate 2-red 84.9 0.72 2.5E-05 42.9 4.3 41 208-248 4-50 (316)
446 3nv9_A Malic enzyme; rossmann 84.7 0.83 2.8E-05 44.6 4.5 40 49-88 217-256 (487)
447 4huj_A Uncharacterized protein 84.7 0.75 2.6E-05 40.6 4.1 34 50-86 22-56 (220)
448 3l9w_A Glutathione-regulated p 84.6 0.8 2.7E-05 44.7 4.6 33 52-87 5-37 (413)
449 1lld_A L-lactate dehydrogenase 84.6 1.1 3.6E-05 42.0 5.3 34 52-86 8-41 (319)
450 3ius_A Uncharacterized conserv 84.6 0.74 2.5E-05 42.1 4.1 33 51-86 5-37 (286)
451 1rp0_A ARA6, thiazole biosynth 84.5 0.75 2.6E-05 42.3 4.1 29 208-236 40-69 (284)
452 3phh_A Shikimate dehydrogenase 84.4 1.2 4E-05 40.7 5.2 33 51-86 118-150 (269)
453 3ihm_A Styrene monooxygenase A 84.2 0.69 2.3E-05 45.5 4.0 28 207-234 22-49 (430)
454 2raf_A Putative dinucleotide-b 84.2 1.3 4.3E-05 38.7 5.3 35 51-88 19-53 (209)
455 3p7m_A Malate dehydrogenase; p 84.0 1.3 4.6E-05 41.5 5.6 37 49-87 3-39 (321)
456 4e4t_A Phosphoribosylaminoimid 84.0 1.2 4.1E-05 43.6 5.5 38 48-88 32-69 (419)
457 3vh1_A Ubiquitin-like modifier 83.9 0.99 3.4E-05 45.9 4.9 37 50-88 326-362 (598)
458 4dgk_A Phytoene dehydrogenase; 83.9 1.4 4.9E-05 43.9 6.3 46 128-173 229-277 (501)
459 1y8q_A Ubiquitin-like 1 activa 83.7 1.1 3.7E-05 42.6 5.0 37 50-88 35-71 (346)
460 3dhn_A NAD-dependent epimerase 83.6 1 3.5E-05 39.5 4.5 34 51-87 4-38 (227)
461 1pjc_A Protein (L-alanine dehy 83.5 1.1 3.9E-05 42.8 5.0 34 51-87 167-200 (361)
462 4gsl_A Ubiquitin-like modifier 83.5 1.2 4.1E-05 45.4 5.3 37 50-88 325-361 (615)
463 3vtf_A UDP-glucose 6-dehydroge 83.2 1.4 4.6E-05 43.3 5.5 39 46-87 16-54 (444)
464 3k5i_A Phosphoribosyl-aminoimi 83.2 1.3 4.5E-05 43.0 5.5 37 49-89 22-58 (403)
465 2iid_A L-amino-acid oxidase; f 83.0 1.1 3.9E-05 44.7 5.1 29 206-234 32-60 (498)
466 3g17_A Similar to 2-dehydropan 83.0 0.96 3.3E-05 41.9 4.2 32 52-86 3-34 (294)
467 3ax6_A Phosphoribosylaminoimid 83.0 1.3 4.6E-05 42.5 5.4 35 52-89 2-36 (380)
468 3doj_A AT3G25530, dehydrogenas 82.8 1.4 4.7E-05 41.1 5.2 35 49-86 19-53 (310)
469 3k7m_X 6-hydroxy-L-nicotine ox 82.8 1.3 4.5E-05 43.2 5.3 35 51-88 1-35 (431)
470 3nks_A Protoporphyrinogen oxid 82.8 1.3 4.3E-05 44.0 5.3 40 51-91 2-41 (477)
471 2i6t_A Ubiquitin-conjugating e 82.7 1.4 4.8E-05 41.0 5.2 36 51-87 14-49 (303)
472 1nyt_A Shikimate 5-dehydrogena 82.7 1.4 4.9E-05 40.2 5.2 34 50-86 118-151 (271)
473 1ez4_A Lactate dehydrogenase; 82.5 1.3 4.6E-05 41.5 5.0 35 51-86 5-39 (318)
474 3g5s_A Methylenetetrahydrofola 82.5 1 3.5E-05 43.5 4.2 27 208-234 2-28 (443)
475 3vku_A L-LDH, L-lactate dehydr 82.4 1.6 5.3E-05 41.1 5.4 37 49-86 7-43 (326)
476 3pvc_A TRNA 5-methylaminomethy 82.3 1.7 5.7E-05 45.6 6.2 47 129-175 421-470 (689)
477 3c24_A Putative oxidoreductase 82.3 1.7 6E-05 39.8 5.7 33 51-86 11-44 (286)
478 3oj0_A Glutr, glutamyl-tRNA re 82.3 0.51 1.7E-05 38.4 1.8 33 51-86 21-53 (144)
479 3jyo_A Quinate/shikimate dehyd 82.3 1.6 5.4E-05 40.2 5.3 36 49-86 125-160 (283)
480 2v6b_A L-LDH, L-lactate dehydr 82.2 1.5 5.1E-05 40.9 5.2 34 53-87 2-35 (304)
481 2uyy_A N-PAC protein; long-cha 82.2 1.7 5.7E-05 40.6 5.6 33 51-86 30-62 (316)
482 1lss_A TRK system potassium up 82.1 2.4 8.1E-05 33.7 5.8 28 207-234 4-31 (140)
483 3r6d_A NAD-dependent epimerase 82.0 1.7 5.8E-05 37.9 5.3 34 50-86 4-39 (221)
484 2ewd_A Lactate dehydrogenase,; 82.0 1.6 5.6E-05 40.8 5.5 35 51-87 4-38 (317)
485 4g65_A TRK system potassium up 82.0 0.48 1.6E-05 47.1 1.7 32 53-87 5-36 (461)
486 2zqz_A L-LDH, L-lactate dehydr 81.9 1.6 5.4E-05 41.1 5.3 37 49-86 7-43 (326)
487 3vps_A TUNA, NAD-dependent epi 81.9 1.6 5.6E-05 40.4 5.4 36 50-88 6-42 (321)
488 1tt5_B Ubiquitin-activating en 81.8 1.4 4.9E-05 43.1 5.1 37 50-88 39-75 (434)
489 1hdo_A Biliverdin IX beta redu 81.8 1.6 5.5E-05 37.3 5.0 33 52-87 4-37 (206)
490 3qha_A Putative oxidoreductase 81.7 1.1 3.7E-05 41.6 4.0 34 51-87 15-48 (296)
491 4aj2_A L-lactate dehydrogenase 81.6 2 6.7E-05 40.5 5.8 38 48-86 16-53 (331)
492 1ks9_A KPA reductase;, 2-dehyd 81.6 1.5 5.3E-05 40.0 5.1 32 53-87 2-33 (291)
493 3i6i_A Putative leucoanthocyan 81.6 1.5 5.1E-05 41.4 5.1 35 50-87 9-44 (346)
494 2g1u_A Hypothetical protein TM 81.6 1.6 5.5E-05 35.9 4.7 30 205-234 17-46 (155)
495 2dvm_A Malic enzyme, 439AA lon 81.6 1.3 4.6E-05 43.3 4.7 36 49-84 184-219 (439)
496 2egg_A AROE, shikimate 5-dehyd 81.5 1.5 5.2E-05 40.6 4.9 35 50-86 140-174 (297)
497 3pwz_A Shikimate dehydrogenase 81.4 1.8 6.1E-05 39.5 5.3 36 49-86 118-153 (272)
498 3tri_A Pyrroline-5-carboxylate 81.3 1.7 5.9E-05 39.8 5.2 36 51-86 3-38 (280)
499 1t2d_A LDH-P, L-lactate dehydr 81.3 1.8 6E-05 40.7 5.3 35 51-87 4-38 (322)
500 2dwc_A PH0318, 433AA long hypo 81.1 2.1 7.3E-05 41.8 6.2 40 46-88 14-53 (433)
No 1
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=1.5e-56 Score=450.67 Aligned_cols=377 Identities=30% Similarity=0.518 Sum_probs=330.2
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHh
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 128 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (469)
++++||||||||+||++||.+|++.|+ +.+|+|||++++++|++|++++.++..... ...+ .....+
T Consensus 7 ~~~~~vvIIGaG~aGl~aA~~L~~~g~-~~~V~lie~~~~~~y~~~~l~~~~~~~~~~-~~~~-----------~~~~~~ 73 (415)
T 3lxd_A 7 AERADVVIVGAGHGGAQAAIALRQNGF-EGRVLVIGREPEIPYERPPLSKEYLAREKT-FERI-----------CIRPAQ 73 (415)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTC-CSCEEEEESSSSCCBCSGGGGTTTTTTSSC-SGGG-----------BSSCHH
T ss_pred CCCCcEEEECChHHHHHHHHHHHccCc-CCCEEEEecCCCCCcCcccCCHHHHcCCCC-HHHh-----------ccCCHH
Confidence 346899999999999999999999997 677999999999999999998766543211 1111 245678
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCCcCCCCCCCCcCcEEEecCHHHHHHHHHhhhc-C
Q 012165 129 WYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEK-A 207 (469)
Q Consensus 129 ~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~-~ 207 (469)
++.+.+++++.+++|..++++.+.|.+.+++.+.||+||+|||++|+ .|+++|.+.++++++++..+...+...+.. +
T Consensus 74 ~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~~~-~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~ 152 (415)
T 3lxd_A 74 FWEDKAVEMKLGAEVVSLDPAAHTVKLGDGSAIEYGKLIWATGGDPR-RLSCVGADLAGVHAVRTKEDADRLMAELDAGA 152 (415)
T ss_dssp HHHHTTEEEEETCCEEEEETTTTEEEETTSCEEEEEEEEECCCEECC-CCBTTSSCCBTEECCCSHHHHHHHHHHHHTTC
T ss_pred HHHHCCcEEEeCCEEEEEECCCCEEEECCCCEEEeeEEEEccCCccC-CCCCCCccccCEEEEcCHHHHHHHHHHhhhcC
Confidence 89999999999999999999999999999999999999999999987 466778778899999999999888887777 9
Q ss_pred CeEEEEcCChHHHHHHHHHHhCCCeEe-------------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEE
Q 012165 208 KKVVVVGGGYIGMEVAAAAVGWKLDTT-------------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVK 268 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~v~-------------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~ 268 (469)
++++|||+|++|+|+|..+.++|.+++ .+.+.+++.||++++++.|++++.+ ++++..|.
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~v~ 231 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGD-GTKVTGVR 231 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEES-SSBEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEec-CCcEEEEE
Confidence 999999999999999999999999987 4567788999999999999999853 56777899
Q ss_pred cCCCCEEeCCEEEEccCCccCCchhhhcCCcccCCCEEeCCCCCCCCCceEEeccccccCCccC-CcccccchHHHHHHH
Q 012165 269 LEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMY-DRTARVEHVDHARQS 347 (469)
Q Consensus 269 ~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~-~~~~~~~~~~~A~~~ 347 (469)
+++|+++++|.||+|+|.+|++++++.+|+..+ ++|.||+++||++|+|||+|||+..+.... |...++++|..|..|
T Consensus 232 l~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~gi~vd~~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~q 310 (415)
T 3lxd_A 232 MQDGSVIPADIVIVGIGIVPCVGALISAGASGG-NGVDVDEFCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDM 310 (415)
T ss_dssp ESSSCEEECSEEEECSCCEESCHHHHHTTCCCS-SSEECCTTCBCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHH
T ss_pred eCCCCEEEcCEEEECCCCccChHHHHhCCCCcC-CCEEECCCCCcCCCCEEEEEeeeeecCcccCCcceeechHHHHHHH
Confidence 999999999999999999999999999999887 469999999999999999999999887655 777778899999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCceeeecccccCCCcceeeEEeecCCC--cEEEEccCC-CcEEEEEEeCCEEEEEEeecCC
Q 012165 348 AQHCIKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG--ETIEIGNFD-PKIATFWIDSGKLKGVLVESGS 424 (469)
Q Consensus 348 a~~~a~~i~~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~--~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~ 424 (469)
|+.+|+||++. ..+|..+|||||++|+.. ++++|...+ +.+..++.+ .+|.++|+++|+|+|+++ +|+
T Consensus 311 g~~aa~~i~g~-~~~~~~~p~~~~~~~~~~-------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~ 381 (415)
T 3lxd_A 311 ATAAAKDICGA-PVPYKATPWFWSNQYDLK-------LQTVGLSTGHDNAVLRGDPATRSFSVVYLKGGKVVALDC-VNM 381 (415)
T ss_dssp HHHHHHHHTTC-CCCCCCCCEEEEEETTEE-------EEEEECCTTCSEEEEEEEGGGTEEEEEEEETTEEEEEEE-ESC
T ss_pred HHHHHHHhcCC-CCCCCCCCeeEeeeCCcE-------EEEEeCCCCCCEEEEEecCCCCeEEEEEEECCEEEEEEE-ECC
Confidence 99999999975 468999999999999865 899998654 456666664 679999999999999996 899
Q ss_pred hHHhHHHHHHHhCCCCCChhhhcCCC
Q 012165 425 PEEFQLLPTLARSQPFVDKAKLQQAS 450 (469)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (469)
+..+..+++|++.+..+++..|.++.
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~l~~~~ 407 (415)
T 3lxd_A 382 VKDYVQGKKLVEARAQIAPEQLADAG 407 (415)
T ss_dssp HHHHHHHHHHHHHTCCCCHHHHTCTT
T ss_pred hHHHHHHHHHHHCCCCCCHHHhcCCC
Confidence 99999999999999999988887664
No 2
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=3.5e-56 Score=446.16 Aligned_cols=375 Identities=30% Similarity=0.477 Sum_probs=329.5
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (469)
+++|+|||||+||++||.+|++.|+ +.+|+|||++++++|++|++++.++.... ....+ .....+++
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~-~~~V~lie~~~~~~y~~~~l~~~~l~~~~-~~~~~-----------~~~~~~~~ 67 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKY-PGRIALINDEKHLPYQRPPLSKAYLKSGG-DPNSL-----------MFRPEKFF 67 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-CSCEEEECCSSSSSBCSGGGGTGGGGSCC-CTTSS-----------BSSCHHHH
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCc-CCCEEEEeCCCCCCCCCccCCHHHHCCCC-CHHHc-----------cCCCHHHH
Confidence 3689999999999999999999997 67899999999999999999886664422 12222 24577889
Q ss_pred HHCCcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCCcCCCCCCCCcCcEEEecCHHHHHHHHHhhhcCCeE
Q 012165 131 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKV 210 (469)
Q Consensus 131 ~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~v 210 (469)
.+.+++++. ++|+.++++.+.|++.+++++.||+||+|||++|+ .|.++|.+.++++++++..+...+...+..++++
T Consensus 68 ~~~~i~~~~-~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~-~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~v 145 (404)
T 3fg2_P 68 QDQAIELIS-DRMVSIDREGRKLLLASGTAIEYGHLVLATGARNR-MLDVPNASLPDVLYLRTLDESEVLRQRMPDKKHV 145 (404)
T ss_dssp HHTTEEEEC-CCEEEEETTTTEEEESSSCEEECSEEEECCCEEEC-CCCSTTTTSTTEECCSSHHHHHHHHHHGGGCSEE
T ss_pred HhCCCEEEE-EEEEEEECCCCEEEECCCCEEECCEEEEeeCCCcc-CCCCCCCCCCcEEEECCHHHHHHHHHHhhcCCeE
Confidence 999999999 89999999999999999999999999999999887 4567787788999999999999988888889999
Q ss_pred EEEcCChHHHHHHHHHHhCCCeEe-------------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCC
Q 012165 211 VVVGGGYIGMEVAAAAVGWKLDTT-------------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED 271 (469)
Q Consensus 211 vVvG~G~~g~e~A~~l~~~g~~v~-------------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~ 271 (469)
+|||+|++|+|+|..+.++|.+++ .+.+.+++.||++++++.|++++.+ ++.+..|.+++
T Consensus 146 vViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~V~~~d 224 (404)
T 3fg2_P 146 VVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAAE-GDRVTGVVLSD 224 (404)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETT
T ss_pred EEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEECCEEEEEEec-CCcEEEEEeCC
Confidence 999999999999999999999887 4567788999999999999999854 56777899999
Q ss_pred CCEEeCCEEEEccCCccCCchhhhcCCcccCCCEEeCCCCCCCCCceEEeccccccCCccCCcccccchHHHHHHHHHHH
Q 012165 272 GSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHC 351 (469)
Q Consensus 272 g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~ 351 (469)
|+++++|.||+|+|.+|++++++.+|+..++ +|.||+++||++|+|||+|||+..+....|...++++|..|..||+.+
T Consensus 225 G~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~-Gi~vd~~~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~a 303 (404)
T 3fg2_P 225 GNTLPCDLVVVGVGVIPNVEIAAAAGLPTAA-GIIVDQQLLTSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCV 303 (404)
T ss_dssp SCEEECSEEEECCCEEECCHHHHHTTCCBSS-SEEECTTSBCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHH
T ss_pred CCEEEcCEEEECcCCccCHHHHHhCCCCCCC-CEEECCCcccCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHH
Confidence 9999999999999999999999999999884 599999999999999999999998876677777788999999999999
Q ss_pred HHHHhcCCCCCCCCCCceeeecccccCCCcceeeEEeecCCC--cEEEEccCC-CcEEEEEEeCCEEEEEEeecCChHHh
Q 012165 352 IKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG--ETIEIGNFD-PKIATFWIDSGKLKGVLVESGSPEEF 428 (469)
Q Consensus 352 a~~i~~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~--~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~ 428 (469)
|++|++. ..+|..+||||+++|+.. ++++|...+ +.+..++.+ .+|.++|+++|+|+|+++ +|+++.+
T Consensus 304 a~~i~g~-~~~~~~~p~~~~~~~~~~-------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~ 374 (404)
T 3fg2_P 304 AARLTGD-AKPYDGYPWFWSDQGDDK-------LQIVGLTAGFDQVVIRGSVAERSFSAFCYKAGKLIGIES-VNRAADH 374 (404)
T ss_dssp HHHTTTC-CCCCCCCCEEEEEETTEE-------EEEEECCTTCCEEEEEEETTTTEEEEEEEETTEEEEEEE-ESCHHHH
T ss_pred HHHhCCC-CCCCCCCCceEeEECCcE-------EEEEeCCCCCCEEEEEecCCCCcEEEEEEECCEEEEEEE-eCCHHHH
Confidence 9999975 468999999999999865 889998653 456677664 579999999999999996 8999999
Q ss_pred HHHHHHHhCCCCCChhhhcCCCc
Q 012165 429 QLLPTLARSQPFVDKAKLQQASS 451 (469)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~ 451 (469)
..+++||+++..+++..|.++..
T Consensus 375 ~~~~~~~~~~~~~~~~~l~~~~~ 397 (404)
T 3fg2_P 375 VFGRKILPLDKSVTPEQAADLSF 397 (404)
T ss_dssp HHHHHHTTTTCCCCHHHHHCTTS
T ss_pred HHHHHHHHcCCCCCHHHhcCCCC
Confidence 99999999999999988877643
No 3
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=2.5e-56 Score=447.81 Aligned_cols=372 Identities=27% Similarity=0.451 Sum_probs=323.8
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (469)
+++|||||||+||++||.+|++.|+ +.+|+|||++++++|++|++++.++..... ...+ ....+++
T Consensus 2 ~~~vvIIGaG~AGl~aA~~L~~~g~-~~~V~li~~~~~~~y~~~~l~~~~~~g~~~-~~~~------------~~~~~~~ 67 (410)
T 3ef6_A 2 ATHVAIIGNGVGGFTTAQALRAEGF-EGRISLIGDEPHLPYDRPSLSKAVLDGSLE-RPPI------------LAEADWY 67 (410)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-CSEEEEEECSSSSSBCSGGGGTHHHHTSSS-SCCB------------SSCTTHH
T ss_pred CCCEEEEcccHHHHHHHHHHHccCc-CCeEEEEECCCCCCcCCccccHHHhCCCCC-HHHh------------cCCHHHH
Confidence 4699999999999999999999997 677999999999999999998865533211 1111 2356788
Q ss_pred HHCCcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCCcCCCCCCCCcCcEEEecCHHHHHHHHHhhhcCCeE
Q 012165 131 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKV 210 (469)
Q Consensus 131 ~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~v 210 (469)
++.+++++.+++|+.++++.++|++.+|+++.||+||||||++|+ .|+++|.+.++++++++..+...+.+.+..++++
T Consensus 68 ~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~-~~~ipG~~~~~v~~~~~~~d~~~l~~~~~~~~~v 146 (410)
T 3ef6_A 68 GEARIDMLTGPEVTALDVQTRTISLDDGTTLSADAIVIATGSRAR-TMALPGSQLPGVVTLRTYGDVQVLRDSWTSATRL 146 (410)
T ss_dssp HHTTCEEEESCCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC-CCCCTTTTSTTEECCCSHHHHHHHHHHCCTTCEE
T ss_pred HHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEccCCccc-CCCCCCccccceEEeccHHHHHHHHHHhccCCeE
Confidence 999999999999999999999999999999999999999999987 4667887788999999999998888877789999
Q ss_pred EEEcCChHHHHHHHHHHhCCCeEe-------------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCC
Q 012165 211 VVVGGGYIGMEVAAAAVGWKLDTT-------------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED 271 (469)
Q Consensus 211 vVvG~G~~g~e~A~~l~~~g~~v~-------------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~ 271 (469)
+|||+|++|+|+|..+.++|.+++ .+.+.+++.||++++++.+++++.+ +.+..|.++|
T Consensus 147 vViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~v~~~d 224 (410)
T 3ef6_A 147 LIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVGFSGE--GQLEQVMASD 224 (410)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCCEEEEECS--SSCCEEEETT
T ss_pred EEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEecc--CcEEEEEECC
Confidence 999999999999999999999988 4467788999999999999999853 3555789999
Q ss_pred CCEEeCCEEEEccCCccCCchhhhcCCcccCCCEEeCCCCCCCCCceEEeccccccCCccCCcccccchHHHHHHHHHHH
Q 012165 272 GSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHC 351 (469)
Q Consensus 272 g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~ 351 (469)
|+++++|.||+|+|.+|++++++++|++.+ ++|.||++++|++|+|||+|||+..+... |...+.++|..|..||+.+
T Consensus 225 g~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~gi~vd~~~~t~~~~IyA~GD~a~~~~~~-g~~~~~~~~~~A~~qg~~a 302 (410)
T 3ef6_A 225 GRSFVADSALICVGAEPADQLARQAGLACD-RGVIVDHCGATLAKGVFAVGDVASWPLRA-GGRRSLETYMNAQRQAAAV 302 (410)
T ss_dssp SCEEECSEEEECSCEEECCHHHHHTTCCBS-SSEECCTTSBCSSTTEEECGGGEEEEBTT-SSEECCCCHHHHHHHHHHH
T ss_pred CCEEEcCEEEEeeCCeecHHHHHhCCCccC-CeEEEccCeeECCCCEEEEEcceeccCCC-CCeeeechHHHHHHHHHHH
Confidence 999999999999999999999999999988 56999999999999999999999987655 6666788899999999999
Q ss_pred HHHHhcCCCCCCCCCCceeeecccccCCCcceeeEEeecCCC--cEEEEccCC-CcEEEEEEeCCEEEEEEeecCChHHh
Q 012165 352 IKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG--ETIEIGNFD-PKIATFWIDSGKLKGVLVESGSPEEF 428 (469)
Q Consensus 352 a~~i~~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~--~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~ 428 (469)
|++|++. ..+|..+||||+++|++. ++++|...+ +.+..++.+ ..|.+||+++|+|+|+++ .|++..+
T Consensus 303 a~~i~g~-~~~~~~~p~~~~~~~~~~-------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~-~~~~~~~ 373 (410)
T 3ef6_A 303 AAAILGK-NVSAPQLPVSWTEIAGHR-------MQMAGDIEGPGDFVSRGMPGSGAALLFRLQERRIQAVVA-VDAPRDF 373 (410)
T ss_dssp HHHHTTC-CCCCCBCCEEEEEETTEE-------EEEESCSSSSSEEEEESCTTSSSEEEEEEETTEEEEEEE-ESCHHHH
T ss_pred HHHHcCC-CCCCCCCCeeEEEECCce-------EEEEcCCCCCCEEEEEeeCCCCeEEEEEEECCEEEEEEE-ECChHHH
Confidence 9999975 468999999999999865 888997654 566677765 579999999999999996 8999999
Q ss_pred HHHHHHHhCCCCCChhhhcCCC
Q 012165 429 QLLPTLARSQPFVDKAKLQQAS 450 (469)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~ 450 (469)
..+++|++.+..+++..|.++.
T Consensus 374 ~~~~~~i~~~~~~~~~~l~~~~ 395 (410)
T 3ef6_A 374 ALATRLVEARAAIEPARLADLS 395 (410)
T ss_dssp HHHHHHHHHTCBCCHHHHHCTT
T ss_pred HHHHHHHhCCCCCCHHHhcCCC
Confidence 9999999999999988887654
No 4
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=5.8e-52 Score=418.47 Aligned_cols=384 Identities=29% Similarity=0.477 Sum_probs=320.8
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
+++||+|||||+||+++|..|++.|+ +.+|+|||+++..+|.++++++.++.... ....+ .....++
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~-~~~V~lie~~~~~~~~~~~l~~~~~~~~~-~~~~~-----------~~~~~~~ 69 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGW-EGNIRLVGDATVIPHHLPPLSKAYLAGKA-TAESL-----------YLRTPDA 69 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTC-CSEEEEECSCCSCCBCSGGGGTTTTTTCS-CSGGG-----------BSSCHHH
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCc-CCCEEEEECCCCCCCcCCCCcHHHhCCCC-ChHHh-----------cccCHHH
Confidence 45899999999999999999999987 66899999999999999888876553221 11111 1345678
Q ss_pred HHHCCcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCCcCCCCCCCCcCc---EEEecCHHHHHHHHHhhhc
Q 012165 130 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPG---VHYIRDVADADALISSLEK 206 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~~~---v~~~~~~~~~~~~~~~~~~ 206 (469)
+++.+++++.+++|+.++++.++|++.+|+++.||+||+|||++|+ .|+++|.+.++ ++++++..+...+.+.+..
T Consensus 70 ~~~~gv~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~p~-~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l~~ 148 (431)
T 1q1r_A 70 YAAQNIQLLGGTQVTAINRDRQQVILSDGRALDYDRLVLATGGRPR-PLPVASGAVGKANNFRYLRTLEDAECIRRQLIA 148 (431)
T ss_dssp HHHTTEEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC-CCGGGTTHHHHSTTEEESSSHHHHHHHHHTCCT
T ss_pred HHhCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEcCCCCcc-CCCCCCcccCCCceEEEECCHHHHHHHHHHhhc
Confidence 8999999999999999999989999999989999999999999987 45667765566 8889999988888777777
Q ss_pred CCeEEEEcCChHHHHHHHHHHhCCCeEe-------------------eeHHHHHHcCcEEEcCCeEEEEEeC-CCCcEEE
Q 012165 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTT-------------------RYEQLYQQNGVKFVKGASIKNLEAG-SDGRVAA 266 (469)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~v~-------------------~~~~~l~~~gV~~~~~~~v~~i~~~-~~~~v~~ 266 (469)
+++++|||+|++|+|+|..|.++|.+|+ .+.+.+++.||++++++.+++++.. +++.+..
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~ 228 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTA 228 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccchhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEE
Confidence 9999999999999999999999999987 3456788899999999999999852 3466667
Q ss_pred EEcCCCCEEeCCEEEEccCCccCCchhhhcCCcccCCCEEeCCCCCCCCCceEEeccccccCCccCCcccccchHHHHHH
Q 012165 267 VKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQ 346 (469)
Q Consensus 267 v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~ 346 (469)
|.+++|+++++|.||+|+|.+|++++++++|++.+ ++|.||+++||+.|+|||+|||+..+....|...++++|..|..
T Consensus 229 v~~~~G~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~-~gi~Vd~~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~ 307 (431)
T 1q1r_A 229 VLCEDGTRLPADLVIAGIGLIPNCELASAAGLQVD-NGIVINEHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALE 307 (431)
T ss_dssp EEETTSCEEECSEEEECCCEEECCHHHHHTTCCBS-SSEECCTTSBCSSTTEEECGGGEEEEETTTTEEEECCSHHHHHH
T ss_pred EEeCCCCEEEcCEEEECCCCCcCcchhhccCCCCC-CCEEECCCcccCCCCEEEEEeEEEEccccCCceEeeCHHHHHHH
Confidence 88999999999999999999999999999999887 46999999999999999999999987655566666778999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCceeeecccccCCCcceeeEEeecCCC--cEEEEccCC-CcEEEEEEeCCEEEEEEeecC
Q 012165 347 SAQHCIKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG--ETIEIGNFD-PKIATFWIDSGKLKGVLVESG 423 (469)
Q Consensus 347 ~a~~~a~~i~~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~--~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~ 423 (469)
||+.+|++|++. ..+|..+|++|+++|+.. ++.+|.... +....++.+ ..|.++|.++|+|+|+++ .+
T Consensus 308 qg~~aa~~i~g~-~~~~~~~p~~~~~~~~~~-------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~-~g 378 (431)
T 1q1r_A 308 QARKIAAILCGK-VPRDEAAPWFWSDQYEIG-------LKMVGLSEGYDRIIVRGSLAQPDFSVFYLQGDRVLAVDT-VN 378 (431)
T ss_dssp HHHHHHHHHTTC-CCCCCCCCEEEEEETTEE-------EEEEECCTTCSEEEEEEETTTTEEEEEEEETTEEEEEEE-ES
T ss_pred HHHHHHHHhcCC-CCCCCCCCeEEEEECCce-------EEEEeCCCCCCEEEEEccCCCCeEEEEEEeCCEEEEEEE-EC
Confidence 999999999964 457888999999998754 777887543 345555554 458888999999999996 78
Q ss_pred ChHHhHHHHHHHhCCCCCChhhhcCCC-cHHHHHH
Q 012165 424 SPEEFQLLPTLARSQPFVDKAKLQQAS-SVEEALE 457 (469)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 457 (469)
+......++.++..+..++...|.++. .+.+.++
T Consensus 379 ~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~ 413 (431)
T 1q1r_A 379 RPVEFNQSKQIITDRLPVEPNLLGDESVPLKEIIA 413 (431)
T ss_dssp CHHHHHHHHHHHHTTCCCCHHHHTCTTSCHHHHHH
T ss_pred ChHHHHHHHHHHHCCCCCCHHHhhCCCCCHHHHHH
Confidence 888888899999999999988876654 4444443
No 5
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=6.2e-53 Score=418.45 Aligned_cols=354 Identities=21% Similarity=0.314 Sum_probs=297.3
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHh
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 128 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (469)
.++.+|||||||+||++||.+|++. ..+|+|||++++++|.+|.+++. +.... ...++ .....+
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~---~~~itlie~~~~~~y~~~~l~~~-l~g~~-~~~~l-----------~~~~~~ 70 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGK---CDDITMINSEKYLPYYRPRLNEI-IAKNK-SIDDI-----------LIKKND 70 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTT---CSCEEEECSSSSCCBCGGGHHHH-HHSCC-CGGGT-----------BSSCHH
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCC---CCEEEEEECCCCCCcccChhhHH-HcCCC-CHHHc-----------cCCCHH
Confidence 4557999999999999999999443 45899999999999999999873 33211 11122 346788
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCCcCCCCCCCCcCcEEEecCHHHHHHHHHhhhcCC
Q 012165 129 WYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAK 208 (469)
Q Consensus 129 ~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~ 208 (469)
++++.+++++++++|+++|++.++|++++|+++.||+||||||++|+ .|+++|.+ +++++++..+...+.+.+..++
T Consensus 71 ~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~-~p~i~G~~--~v~~~~~~~d~~~l~~~l~~~~ 147 (385)
T 3klj_A 71 WYEKNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIAN-KIKVPHAD--EIFSLYSYDDALKIKDECKNKG 147 (385)
T ss_dssp HHHHTTCEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC-CCCCTTCS--CEECCSSHHHHHHHHHHHHHHS
T ss_pred HHHHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEecCCCcC-CCCCCCCC--CeEEeCCHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999999987 45677755 8899999999998888777889
Q ss_pred eEEEEcCChHHHHHHHHHHhCCCeEe-------------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEc
Q 012165 209 KVVVVGGGYIGMEVAAAAVGWKLDTT-------------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL 269 (469)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g~~v~-------------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~ 269 (469)
+++|||+|++|+|+|..|+++|.+|+ .+.+.+++.||++++++.++++
T Consensus 148 ~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i------------- 214 (385)
T 3klj_A 148 KAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEM------------- 214 (385)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGGC-------------
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEEc-------------
Confidence 99999999999999999999999988 4567788999999999877655
Q ss_pred CCCCEEeCCEEEEccCCccCCchhhhcCCcccCCCEEeCCCCCCCCCceEEeccccccCCccCCcccccchHHHHHHHHH
Q 012165 270 EDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQ 349 (469)
Q Consensus 270 ~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~ 349 (469)
|+++++|.||+++|++|++++++++|+..+ ++|.||+++||+.|+|||+|||+..+... ..+|..|..||+
T Consensus 215 --g~~~~~D~vv~a~G~~p~~~~~~~~gl~~~-~gi~vd~~~~t~~~~IyA~GD~a~~~~~~------~~~~~~A~~qg~ 285 (385)
T 3klj_A 215 --GDLIRSSCVITAVGVKPNLDFIKDTEIASK-RGILVNDHMETSIKDIYACGDVAEFYGKN------PGLINIANKQGE 285 (385)
T ss_dssp --HHHHHHSEEEECCCEEECCGGGTTSCCCBS-SSEEECTTCBCSSTTEEECGGGEEETTBC------CCCHHHHHHHHH
T ss_pred --CeEEecCeEEECcCcccChhhhhhcCCCcC-CCEEECCCcccCCCCEEEEEeeEecCCCc------ccHHHHHHHHHH
Confidence 567999999999999999999999999887 45999999999999999999999876432 236888999999
Q ss_pred HHHHHHhcCCCCCCCC-CCceeeecccccCCCcceeeEEeecCCC---cEEEEccCCCcEEEEEEeCCEEEEEEeecCCh
Q 012165 350 HCIKALLSAQTHTYDY-LPYFYSRVFEYEGSPRKVWWQFFGDNVG---ETIEIGNFDPKIATFWIDSGKLKGVLVESGSP 425 (469)
Q Consensus 350 ~~a~~i~~~~~~~~~~-~p~~~~~~~~~~g~~~~~~~~~~G~~~~---~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 425 (469)
.+|++|++. ..+|.. +|++|+++|+.. ++.+|.... +.+.....+..|.++|+++|+|+|+++ .|+.
T Consensus 286 ~aa~~i~g~-~~~~~~~~~~~~~~~~~~~-------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~-~g~~ 356 (385)
T 3klj_A 286 VAGLNACGE-DASYSEIIPSPILKVSGIS-------IISCGDIENNKPSKVFRSTQEDKYIVCMLKENKIDAAAV-IGDV 356 (385)
T ss_dssp HHHHHHTTC-CCCCCCCCCCCEEEETTEE-------EEEESCCTTCCCSEEEEEECSSCEEEEEEETTEEEEEEE-ESCH
T ss_pred HHHHHhcCC-CcCCCCCCCcEEEEeCCCc-------EEEEcCCCCCCCeEEEEECCCCeEEEEEEECCEEEEEEE-ECCc
Confidence 999999974 456765 699999999865 788887653 334442224579999999999999996 7888
Q ss_pred HHhHHHHHHHhCCCCCChhhhcCCCcHHHHHH
Q 012165 426 EEFQLLPTLARSQPFVDKAKLQQASSVEEALE 457 (469)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (469)
.....++.+++++.+++.- ++++|.|+
T Consensus 357 ~~~~~~~~~i~~~~~~~~~-----~~~~E~~~ 383 (385)
T 3klj_A 357 SLGTKLKKAIDSSKSFDNI-----SSLDAILN 383 (385)
T ss_dssp HHHHHHHHHHHTTCBCSCC-----SCHHHHHT
T ss_pred HHHHHHHHHHHcCCCcccc-----cCHHHHHh
Confidence 8888899999998877644 89999886
No 6
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=8.7e-52 Score=414.42 Aligned_cols=372 Identities=26% Similarity=0.403 Sum_probs=309.0
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
+++||+|||||+||+++|..|++.|+ +.+|+|||+++..+|.+|.+++.++.... ..++ ... +
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~-~~~V~lie~~~~~~~~~~~~~~~~~~~~~--~~~~-------------~~~-~ 68 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGY-QGLITVVGDEAERPYDRPPLSKDFMAHGD--AEKI-------------RLD-C 68 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTC-CSCEEEEESSCSCCBCSGGGGTHHHHHCC--GGGS-------------BCC-C
T ss_pred CCCcEEEECChHHHHHHHHHHHccCC-CCeEEEEECCCCCcccCCCCCHHHhCCCc--hhhh-------------hHH-H
Confidence 45799999999999999999999997 66899999999999998888765543211 1111 011 4
Q ss_pred HHHCCcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCCcCCCC-CCCCcCcEEEecCHHHHHHHHHhhhcCC
Q 012165 130 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEK-IGGYLPGVHYIRDVADADALISSLEKAK 208 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~-~g~~~~~v~~~~~~~~~~~~~~~~~~~~ 208 (469)
+++.+++++.+++|+.++++.++|++.+|+++.||+||+|||++|+ .|++ +|.+ ++++++++..+...+.+.+..++
T Consensus 69 ~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~~~-~~~i~~G~~-~~v~~~~~~~~~~~l~~~~~~~~ 146 (408)
T 2gqw_A 69 KRAPEVEWLLGVTAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPR-ALPTLQGAT-MPVHTLRTLEDARRIQAGLRPQS 146 (408)
T ss_dssp TTSCSCEEEETCCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC-CCGGGTTCS-SCEEECCSHHHHHHHHTTCCTTC
T ss_pred HHHCCCEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCC-CCCccCCCC-CcEEEECCHHHHHHHHHHhhcCC
Confidence 5678999999988999999999999999989999999999999987 4556 7766 78989999988888877666789
Q ss_pred eEEEEcCChHHHHHHHHHHhCCCeEe-------------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEc
Q 012165 209 KVVVVGGGYIGMEVAAAAVGWKLDTT-------------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL 269 (469)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g~~v~-------------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~ 269 (469)
+++|||+|++|+|+|..|.++|.+|+ .+.+.+++.||++++++.+++++ + + .|++
T Consensus 147 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~--~---~v~~ 220 (408)
T 2gqw_A 147 RLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSV-D--G---VVLL 220 (408)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEE-T--T---EEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEeCCEEEEEE-C--C---EEEE
Confidence 99999999999999999999999987 34567889999999999999998 3 2 5778
Q ss_pred CCCCEEeCCEEEEccCCccCCchhhhcCCcccCCCEEeCCCCCCCCCceEEeccccccCCccCCcccccchHHHHHHHHH
Q 012165 270 EDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQ 349 (469)
Q Consensus 270 ~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~ 349 (469)
++|+++++|.||+|+|.+|++++++++|++.++ +|.||+++||++|+|||+|||+..+....|...+.+++..|..||+
T Consensus 221 ~~g~~i~~D~vi~a~G~~p~~~l~~~~gl~~~~-gi~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~ 299 (408)
T 2gqw_A 221 DDGTRIAADMVVVGIGVLANDALARAAGLACDD-GIFVDAYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGI 299 (408)
T ss_dssp TTSCEEECSEEEECSCEEECCHHHHHHTCCBSS-SEECCTTCBCSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHH
T ss_pred CCCCEEEcCEEEECcCCCccHHHHHhCCCCCCC-CEEECCCCccCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHH
Confidence 899999999999999999999999999998874 5999999999999999999999987655555555678899999999
Q ss_pred HHHHHHhcCCCCCCCCCCceeeecccccCCCcceeeEEeec-CCCcEEEEccCC---CcEEEEEEeCCEEEEEEeecCCh
Q 012165 350 HCIKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGD-NVGETIEIGNFD---PKIATFWIDSGKLKGVLVESGSP 425 (469)
Q Consensus 350 ~~a~~i~~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~-~~~~~~~~~~~~---~~~~~~~~~~~~l~g~~~~~~~~ 425 (469)
.+|+||++....+|..+|++|+++|+.. ++.+|. ...+....++.+ ..|.++|+++++|+|+++ .++.
T Consensus 300 ~aa~~i~g~~~~~~~~~p~~~~~~~~~~-------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~-~g~~ 371 (408)
T 2gqw_A 300 AVARHLVDPTAPGYAELPWYWSDQGALR-------IQVAGLASGDEEIVRGEVSLDAPKFTLIELQKGRIVGATC-VNNA 371 (408)
T ss_dssp HHHHHHHCTTSCCCCCCCEEEEEETTEE-------EEEEECSCCSEEEEESCCCSSSCCEEEEEEETTEEEEEEE-ESCH
T ss_pred HHHHHhcCCCCCcCCCCCeEEEEECCce-------EEEECCCCCCEEEEEccCCCCCCeEEEEEEeCCEEEEEEE-ECCh
Confidence 9999999754327888999999999864 777886 222455565553 468899999999999997 6777
Q ss_pred HHhHHHHHHHhCCCCCChhhhcCCC-cHHHH
Q 012165 426 EEFQLLPTLARSQPFVDKAKLQQAS-SVEEA 455 (469)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 455 (469)
.....++.+++.+..++...+.++. .+.+.
T Consensus 372 ~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~ 402 (408)
T 2gqw_A 372 RDFAPLRRLLAVGAKPDRAALADPATDLRKL 402 (408)
T ss_dssp HHHHHHHHHHHTTCCCCHHHHHCTTCCHHHH
T ss_pred HHHHHHHHHHHCCCCCChHHhcCCCCCHHHH
Confidence 7788899999999999988877664 34433
No 7
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=1.3e-49 Score=407.74 Aligned_cols=386 Identities=23% Similarity=0.351 Sum_probs=289.4
Q ss_pred CCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCC---CCCCCccccCCCCCC
Q 012165 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPA---RLPGFHTCVGSGGER 124 (469)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 124 (469)
++.++||||||||+||++||..|++.++ ..+|+|||++++++|.+|++++.++........ +++++.... .....
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~~-g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~-~~~~~ 85 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARDP-GARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKE-RSIYF 85 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHST-TCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCE-EESBS
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcCC-CCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhccccccccccc-ccccc
Confidence 3456899999999999999999999864 669999999999999999988866543221000 000000000 00000
Q ss_pred CCHhH---------HHHCCcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCCcCCCCCCCC----cCcEEEe
Q 012165 125 QTPEW---------YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGY----LPGVHYI 191 (469)
Q Consensus 125 ~~~~~---------~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~----~~~v~~~ 191 (469)
...++ +.+.+++++.+++|+.+|++.++|++++|+++.||+||||||++|+.+| .++.. .++++++
T Consensus 86 ~~~~~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g~~i~yd~lviATGs~p~~~~-~~~~~~~~~~~~v~~~ 164 (493)
T 1m6i_A 86 QPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLS-AIDRAGAEVKSRTTLF 164 (493)
T ss_dssp SCGGGSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEETTSCEEEEEEEEECCCEEECCCH-HHHTSCHHHHHTEEEC
T ss_pred cchHhhcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCCCCC-CcccccccccCceEEE
Confidence 01111 1356899999999999999999999999999999999999999987544 33321 3578888
Q ss_pred cCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHh----CCCeEe-------------------eeHHHHHHcCcEEE
Q 012165 192 RDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVG----WKLDTT-------------------RYEQLYQQNGVKFV 248 (469)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~----~g~~v~-------------------~~~~~l~~~gV~~~ 248 (469)
++..++..+...+..+++++|||+|++|+|+|..|++ .|.+++ .+.+.+++.||+++
T Consensus 165 ~~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~ 244 (493)
T 1m6i_A 165 RKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVM 244 (493)
T ss_dssp CSHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEE
T ss_pred cCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHHHHHHHHHHhcCCEEE
Confidence 9998888888777789999999999999999999876 466665 33567888999999
Q ss_pred cCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCchhhhcCCccc--CCCEEeCCCCCCCCCceEEeccccc
Q 012165 249 KGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS--VGGIQVDGQFRTRMPGIFAIGDVAA 326 (469)
Q Consensus 249 ~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~--~g~i~Vd~~~~t~~~~Vfa~GD~a~ 326 (469)
+++.|++++.+ ++.+ .+.+++|+++++|.||+++|.+||+++++++|++.+ +|+|.||++||| .|+|||+|||+.
T Consensus 245 ~~~~V~~i~~~-~~~~-~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~gl~~~~~~ggi~Vd~~l~t-~~~IyA~GD~a~ 321 (493)
T 1m6i_A 245 PNAIVQSVGVS-SGKL-LIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQA-RSNIWVAGDAAC 321 (493)
T ss_dssp CSCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECCCEEECCTTHHHHTCCBCTTTCSEECCTTCEE-ETTEEECGGGEE
T ss_pred eCCEEEEEEec-CCeE-EEEECCCCEEECCEEEECCCCCccHHHHHHcCCccccCCCcEEECCCccc-CCCeeEeeeeEe
Confidence 99999999853 3444 688899999999999999999999999999998876 379999999998 699999999998
Q ss_pred cCCccCCcccccchHHHHHHHHHHHHHHHhcCCCCCCCCCCceeeecccccCCCc----ceeeEEeecCCC-----c---
Q 012165 327 FPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYDYLPYFYSRVFEYEGSPR----KVWWQFFGDNVG-----E--- 394 (469)
Q Consensus 327 ~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~~~~~~~p~~~~~~~~~~g~~~----~~~~~~~G~~~~-----~--- 394 (469)
.+....|.. ++++|++|..||+.+|.||++ ...+|...||||++++...+... ...++.+|.... .
T Consensus 322 ~~~~~~g~~-~~~~~~~A~~qg~~aa~ni~g-~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~G~~~~~~~~~~~~~ 399 (493)
T 1m6i_A 322 FYDIKLGRR-RVEHHDHAVVSGRLAGENMTG-AAKPYWHQSMFWSDLGPDVGYEAIGLVDSSLPTVGVFAKATAQDNPKS 399 (493)
T ss_dssp EEETTTEEE-CCCCHHHHHHHHHHHHHHHTS-CCCCCCCCCEEEEESSTTCEEEEEECCCTTSCEEEEEECCCTTCSHHH
T ss_pred ccCcccCcc-ccchHHHHHHHHHHHHHHhcC-CCCCcCCcCceeeeeccCcceEEEeccCCCcceEEeeccccccccccc
Confidence 765444443 467899999999999999996 45789999999999983211000 001233332100 0
Q ss_pred ---------------------EEEE----c-------c-CCCcEEEEEEeCCEEEEEEeecCChHHhHHHHHHHhCCCCC
Q 012165 395 ---------------------TIEI----G-------N-FDPKIATFWIDSGKLKGVLVESGSPEEFQLLPTLARSQPFV 441 (469)
Q Consensus 395 ---------------------~~~~----~-------~-~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~ 441 (469)
.... + + ...+|.+||+++|+|+|+++ +|+++.++.+++||+.+..+
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~li~~~~~~ 478 (493)
T 1m6i_A 400 ATEQSGTGIRSESETESEASEITIPPSTPAVPQAPVQGEDYGKGVIFYLRDKVVVGIVL-WNIFNRMPIARKIIKDGEQH 478 (493)
T ss_dssp HHHHHSCSCHHHHSCSCCCC--------------------CCEEEEEEEETTEEEEEEE-ESCCSCHHHHHHHHHHCCBC
T ss_pred ccccccccccccccccccccccccccccccccccccccccCCcEEEEEEeCCEEEEEEE-ecCcchHHHHHHHHhCCCCC
Confidence 0000 0 1 12456889999999999996 89999999999999888765
Q ss_pred C
Q 012165 442 D 442 (469)
Q Consensus 442 ~ 442 (469)
+
T Consensus 479 ~ 479 (493)
T 1m6i_A 479 E 479 (493)
T ss_dssp S
T ss_pred C
Confidence 4
No 8
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=8.5e-47 Score=381.02 Aligned_cols=374 Identities=21% Similarity=0.286 Sum_probs=284.5
Q ss_pred CcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCC-CCCCCCCCCccccCCCCCCCCHhHH
Q 012165 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLD-KKPARLPGFHTCVGSGGERQTPEWY 130 (469)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (469)
++|||||||+||++||.+|++.|+ +.+|+|||++++.+|.++.+++. +.... .....+ .....+++
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~-~~~V~lie~~~~~~~~~~~l~~~-~~~~~~~~~~~~-----------~~~~~~~~ 67 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDK-ESDIIIFEKDRDMSFANCALPYV-IGEVVEDRRYAL-----------AYTPEKFY 67 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCS-SSCEEEEESSSCSSBCGGGHHHH-HTTSSCCGGGTB-----------CCCHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC-CCcEEEEeCCCCCCCCcchhHHH-HcCCccchhhhh-----------hcCHHHHH
Confidence 379999999999999999999986 77899999999999998877652 22111 111111 12446778
Q ss_pred HHCCcEEEeCCcEEEEeCCCcEEEeCC-----CeEEEeccEEeccCCCCCcCCCCCCCCcCcEEEecCHHHHHHHHHhhh
Q 012165 131 KEKGIEMIYQDPVTSIDIEKQTLITNS-----GKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE 205 (469)
Q Consensus 131 ~~~~i~~~~~~~v~~id~~~~~v~~~~-----g~~~~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~ 205 (469)
++.+++++.+++|+.+|.+.+.+.+.+ +.++.||+||||||++|+. |.+++ ++++++++..++..+.+.+.
T Consensus 68 ~~~~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~-p~i~g---~~~~~~~~~~~~~~l~~~~~ 143 (437)
T 4eqs_A 68 DRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANS-LGFES---DITFTLRNLEDTDAIDQFIK 143 (437)
T ss_dssp HHHCCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEECC-CCCCC---TTEECCSSHHHHHHHHHHHH
T ss_pred HhcCCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCcccc-ccccC---ceEEeeccHHHHHHHHHhhh
Confidence 899999999999999999998776643 2468999999999999874 44444 56788888888887766543
Q ss_pred --cCCeEEEEcCChHHHHHHHHHHhCCCeEe------------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEE
Q 012165 206 --KAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVA 265 (469)
Q Consensus 206 --~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~ 265 (469)
.+++++|||+|++|+|+|..+.++|.+|+ .+.+.++++||++++++.+++++..
T Consensus 144 ~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~------ 217 (437)
T 4eqs_A 144 ANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLNEEINAINGN------ 217 (437)
T ss_dssp HHTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTSCGGGGHHHHHHHHHTTCCEEESCCEEEEETT------
T ss_pred ccCCcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccccccchhHHHHHHHhhccceEEEeccEEEEecCC------
Confidence 47899999999999999999999999998 5678899999999999999998732
Q ss_pred EEEcCCCCEEeCCEEEEccCCccCCchhhhcCCccc-CCCEEeCCCCCCCCCceEEeccccccCCccCCcccccchHHHH
Q 012165 266 AVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHA 344 (469)
Q Consensus 266 ~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A 344 (469)
.+.+++|+++++|.|++++|++||+++++.+|++.+ +|+|.||+++||++|||||+|||+..+....+.......+..|
T Consensus 218 ~v~~~~g~~~~~D~vl~a~G~~Pn~~~~~~~gl~~~~~G~I~vd~~~~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A 297 (437)
T 4eqs_A 218 EITFKSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGA 297 (437)
T ss_dssp EEEETTSCEEECSEEEECCCEEESCGGGTTSSCCCCTTSCEECCTTCBCSSTTEEECGGGEEEEBSSSSSEECCCSHHHH
T ss_pred eeeecCCeEEeeeeEEEEeceecCcHHHHhhhhhhccCCcEecCCCccCCCCCEEEEEEccCcccccCCccccchhHHHH
Confidence 578899999999999999999999999999999876 5779999999999999999999999887766766666778889
Q ss_pred HHHHHHHHHHHhcCCCCCCC-CCCceeeecccccCCCcceeeEEeecCCCc-------EEE--EccC-------CCcEEE
Q 012165 345 RQSAQHCIKALLSAQTHTYD-YLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------TIE--IGNF-------DPKIAT 407 (469)
Q Consensus 345 ~~~a~~~a~~i~~~~~~~~~-~~p~~~~~~~~~~g~~~~~~~~~~G~~~~~-------~~~--~~~~-------~~~~~~ 407 (469)
.+||+.+|+||++....++. ..+..+...++.+ +..+|.++.+ ... .... ...+.|
T Consensus 298 ~~~g~~~a~ni~g~~~~~~~~~~~~~~~~~~~p~-------ia~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~K 370 (437)
T 4eqs_A 298 HRAASIVAEQIAGNDTIEFKGFLGNNIVKFFDYT-------FASVGVKPNELKQFDYKMVEVTQGAHANYYPGNSPLHLR 370 (437)
T ss_dssp HHHHHHHHHHHHSCTTCCCCCBCCCEEEEETTEE-------EEEEESCGGGGGGSCEEEEEEEEESSCTTSSSCCEEEEE
T ss_pred HHHHHHHHHHHcCCCCcccccceeEEeeeeccce-------EEEeeCCHHHHHhCCceEEEEecCCchhhcCCCCcEEEE
Confidence 99999999999986554442 3333333333222 4556654321 111 1110 112667
Q ss_pred EEEe--CCEEEEEEeecCC-hHHhHH-HHHHHhCCCCCCh-hhh--cCCCcHHHH
Q 012165 408 FWID--SGKLKGVLVESGS-PEEFQL-LPTLARSQPFVDK-AKL--QQASSVEEA 455 (469)
Q Consensus 408 ~~~~--~~~l~g~~~~~~~-~~~~~~-~~~~~~~~~~~~~-~~~--~~~~~~~~~ 455 (469)
++++ +++|+|+++++.+ ++++.. +..+|+.+.+++. ..+ ..||+++++
T Consensus 371 li~d~~~~~ilGa~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~yhP~~s~~ 425 (437)
T 4eqs_A 371 VYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFEVAFAPPYSHP 425 (437)
T ss_dssp EEEETTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCCCCCCTTTCCS
T ss_pred EEEECCCCEEEEEEEECcCCHHHHHHHHHHHHHcCCcHHHHhcCccccCCCCCch
Confidence 7774 5899999987654 665544 5556788887763 222 346777654
No 9
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=5.1e-46 Score=367.03 Aligned_cols=337 Identities=24% Similarity=0.401 Sum_probs=264.0
Q ss_pred CcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHHH
Q 012165 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYK 131 (469)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (469)
.|++|||||+||++||..|++.| +|+|||+++..+|.++.+++ ++... .....+ .....++++
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g----~V~lie~~~~~~~~~~~l~~-~~~g~-~~~~~~-----------~~~~~~~~~ 71 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY----EVTVIDKEPVPYYSKPMLSH-YIAGF-IPRNRL-----------FPYSLDWYR 71 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS----EEEEECSSSSCCCCSTTHHH-HHTTS-SCGGGG-----------CSSCHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHhhcC----CEEEEECCCCCccccchhHH-HHhCC-CCHHHh-----------ccCCHHHHH
Confidence 58999999999999999998875 79999999998888887765 23211 111111 234677889
Q ss_pred HCCcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCCcCCCCCCCCcCcEEEecCHHHHHHHHHhhhcCCeEE
Q 012165 132 EKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVV 211 (469)
Q Consensus 132 ~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vv 211 (469)
+.+++++.+++|+.+|++.++|+ .+++++.||+||||||++|+ .|+++| .++++++++..+...+.+.+.++++++
T Consensus 72 ~~~v~~~~g~~v~~id~~~~~V~-~~g~~~~~d~lViATGs~p~-~p~i~G--~~~v~~~~~~~~~~~l~~~~~~~~~vv 147 (367)
T 1xhc_A 72 KRGIEIRLAEEAKLIDRGRKVVI-TEKGEVPYDTLVLATGARAR-EPQIKG--KEYLLTLRTIFDADRIKESIENSGEAI 147 (367)
T ss_dssp HHTEEEECSCCEEEEETTTTEEE-ESSCEEECSEEEECCCEEEC-CCCSBT--GGGEECCCSHHHHHHHHHHHHHHSEEE
T ss_pred hCCcEEEECCEEEEEECCCCEEE-ECCcEEECCEEEECCCCCCC-CCCCCC--cCCEEEEcCHHHHHHHHHHhhcCCcEE
Confidence 99999999988999999988888 67888999999999999987 455676 577888888888888777666779999
Q ss_pred EEcCChHHHHHHHHHHhCCCeEe-----------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCE
Q 012165 212 VVGGGYIGMEVAAAAVGWKLDTT-----------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGST 274 (469)
Q Consensus 212 VvG~G~~g~e~A~~l~~~g~~v~-----------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~ 274 (469)
|||+|++|+|+|..|+++|.+|+ .+.+.+++.||++++++++++++. + .+.+++|+
T Consensus 148 ViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~--~----~v~~~~g~- 220 (367)
T 1xhc_A 148 IIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLGLDEELSNMIKDMLEETGVKFFLNSELLEANE--E----GVLTNSGF- 220 (367)
T ss_dssp EEECSHHHHHHHHHHHHTTCEEEEECSSSCCTTCCHHHHHHHHHHHHHTTEEEECSCCEEEECS--S----EEEETTEE-
T ss_pred EECCCHHHHHHHHHHHhCCCEEEEEeCCCeeccCCHHHHHHHHHHHHHCCCEEEcCCEEEEEEe--e----EEEECCCE-
Confidence 99999999999999999999998 235678899999999999999972 1 47788887
Q ss_pred EeCCEEEEccCCccCCchhhhcCCcccCCCEEeCCCCCCCCCceEEeccccccCCccCCcccccchHHHHHHHHHHHHHH
Q 012165 275 IDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKA 354 (469)
Q Consensus 275 i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~ 354 (469)
+++|.||+|+|++||++++++++++.+ ++|.||+++||+.|+|||+|||+..+... ...+..|..||+.+|+|
T Consensus 221 i~~D~vi~a~G~~p~~~ll~~~gl~~~-~gi~Vd~~~~t~~~~IyA~GD~a~~~~~~------~~~~~~A~~qg~~aa~~ 293 (367)
T 1xhc_A 221 IEGKVKICAIGIVPNVDLARRSGIHTG-RGILIDDNFRTSAKDVYAIGDCAEYSGII------AGTAKAAMEQARVLADI 293 (367)
T ss_dssp EECSCEEEECCEEECCHHHHHTTCCBS-SSEECCTTSBCSSTTEEECGGGEEBTTBC------CCSHHHHHHHHHHHHHH
T ss_pred EEcCEEEECcCCCcCHHHHHhCCCCCC-CCEEECCCcccCCCCEEEeEeeeecCCCC------ccHHHHHHHHHHHHHHH
Confidence 999999999999999999999999887 56999999999999999999999753321 12677899999999999
Q ss_pred HhcCCCCCCCCCCceee-ecccccCCCcceeeEEeecCCCcEEEEccCCCcEEEEEEeCCEEEEEEeecCChHHhHHHHH
Q 012165 355 LLSAQTHTYDYLPYFYS-RVFEYEGSPRKVWWQFFGDNVGETIEIGNFDPKIATFWIDSGKLKGVLVESGSPEEFQLLPT 433 (469)
Q Consensus 355 i~~~~~~~~~~~p~~~~-~~~~~~g~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 433 (469)
|++. ..+|...+.+|+ .+++.. +..+|....+.... ..|.++++++++|+|+++ .+.......+++
T Consensus 294 i~g~-~~~~~~~~~~~~~~~~~~~-------~~~vG~~~~~~~~~----~~~~k~~~~~~~ilG~~~-~g~~~~~~~~~~ 360 (367)
T 1xhc_A 294 LKGE-PRRYNFKFRSTVFKFGKLQ-------IAIIGNTKGEGKWI----EDNTKVFYENGKIIGAVV-FNDIRKATKLEK 360 (367)
T ss_dssp HTTC-CCCCCSSCCEEEEEETTEE-------EEEEECCSSCEEEE----ETTEEEEC-----CEEEE-ESCHHHHHHHC-
T ss_pred hcCC-CccCCCCCCceEEEECCce-------EEEECCCCCCCccc----ceEEEEEEECCEEEEEEE-ECChHHHHHHHH
Confidence 9964 456666555554 444432 67788766532211 346788888999999997 677777888887
Q ss_pred HHh
Q 012165 434 LAR 436 (469)
Q Consensus 434 ~~~ 436 (469)
++.
T Consensus 361 ~i~ 363 (367)
T 1xhc_A 361 EIL 363 (367)
T ss_dssp ---
T ss_pred HHh
Confidence 763
No 10
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=1.9e-46 Score=384.51 Aligned_cols=388 Identities=18% Similarity=0.280 Sum_probs=291.4
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
+++||+|||||+||+++|..|++.|.+..+|+|||+++..+|....+.. ++.........+ .....++
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~-~~~~~~~~~~~~-----------~~~~~~~ 101 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMAL-WIGEQIAGPEGL-----------FYSDKEE 101 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHH-HHTTSSSCSGGG-----------BSCCHHH
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccch-hhcCccCCHHHh-----------hhcCHHH
Confidence 4589999999999999999999987113489999999877665332221 111110111111 2245677
Q ss_pred HHHCCcEEEeCCcEEEEeCCCcEEEeC-CC--eEEEeccEEeccCCCCCcCCCCCCCC-----------cCcEEEecCHH
Q 012165 130 YKEKGIEMIYQDPVTSIDIEKQTLITN-SG--KLLKYGSLIVATGCTASRFPEKIGGY-----------LPGVHYIRDVA 195 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~~~v~~~-~g--~~~~yd~lVlAtG~~~~~~~~~~g~~-----------~~~v~~~~~~~ 195 (469)
+++.+++++.+++|+.++.+.++|++. ++ .++.||+||||||++|. .|+++|.+ .+++++++++.
T Consensus 102 ~~~~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~-~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~ 180 (490)
T 2bc0_A 102 LESLGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPI-LPPIKGAEIKEGSLEFEATLENLQFVKLYQ 180 (490)
T ss_dssp HHHTTCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCEEEC-CCSCBTCCBCTTCTTCCBSSTTEEECSSHH
T ss_pred HHhCCCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcC-CCCCCCccccccccccccccCCEEEeCCHH
Confidence 888999999999999999988888876 53 47999999999999987 56677766 57899999999
Q ss_pred HHHHHHHhh--hcCCeEEEEcCChHHHHHHHHHHhCCCeEe-------------------eeHHHHHHcCcEEEcCCeEE
Q 012165 196 DADALISSL--EKAKKVVVVGGGYIGMEVAAAAVGWKLDTT-------------------RYEQLYQQNGVKFVKGASIK 254 (469)
Q Consensus 196 ~~~~~~~~~--~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~-------------------~~~~~l~~~gV~~~~~~~v~ 254 (469)
+.+.+.+.. ..+++++|||+|++|+|+|..|+++|.+|+ .+.+.+++.||++++++.++
T Consensus 181 ~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~ 260 (490)
T 2bc0_A 181 NSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVK 260 (490)
T ss_dssp HHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEETCCEE
T ss_pred HHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEE
Confidence 998888877 678999999999999999999999999987 34567888999999999999
Q ss_pred EEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCchhhhcCCccc-CCCEEeCCCCCCCCCceEEeccccccCCccCC
Q 012165 255 NLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYD 333 (469)
Q Consensus 255 ~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~ 333 (469)
+++. ++.+..+.+ +|+++++|.||+|+|++|+++++++. ++.+ +|+|.||+++||+.|+|||+|||+..+....+
T Consensus 261 ~i~~--~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~ll~~~-l~~~~~G~I~Vd~~~~t~~~~IyA~GD~~~~~~~~~g 336 (490)
T 2bc0_A 261 EVAG--NGKVEKIIT-DKNEYDVDMVILAVGFRPNTTLGNGK-IDLFRNGAFLVNKRQETSIPGVYAIGDCATIYDNATR 336 (490)
T ss_dssp EEEC--SSSCCEEEE-SSCEEECSEEEECCCEEECCGGGTTC-SCBCTTSCBCCCTTCBCSSTTEEECGGGBCEEETTTT
T ss_pred EEEc--CCcEEEEEE-CCcEEECCEEEECCCCCcChHHHHhh-hccCCCCCEEECCCcccCCCCEEEeeeeEEeccccCC
Confidence 9984 444434555 67899999999999999999988877 7764 57799999999999999999999987654444
Q ss_pred cccccchHHHHHHHHHHHHHHHhcCCCCCCCCCCceeeecccccCCCcceeeEEeecCCC-------cEEE-------Ec
Q 012165 334 RTARVEHVDHARQSAQHCIKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG-------ETIE-------IG 399 (469)
Q Consensus 334 ~~~~~~~~~~A~~~a~~~a~~i~~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~-------~~~~-------~~ 399 (469)
...+...+..|..||+.+|+||++.........|++|+.+|+.. +..+|.... +... ..
T Consensus 337 ~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~-------~~~vG~~~~~a~~~g~~~~~~~~~~~~~~ 409 (490)
T 2bc0_A 337 DTNYIALASNAVRTGIVAAHNACGTDLEGIGVQGSNGISIYGLH-------MVSTGLTLEKAKRLGFDAAVTEYTDNQKP 409 (490)
T ss_dssp EEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEE-------EEEEECCHHHHHHTTCCEEEEEEEEESSC
T ss_pred ceeecccHHHHHHHHHHHHHHhcCCCCCCCCcccceEEEECCcE-------eEEeeCCHHHHHHcCCceEEEEEecCCcc
Confidence 44345578889999999999999643222334678888888643 666776431 1111 11
Q ss_pred cC----C-CcEEEEEEe--CCEEEEEEeecC-ChHH-hHHHHHHHhCCCCCChhh---hcCCCcHHHHHHHHHh
Q 012165 400 NF----D-PKIATFWID--SGKLKGVLVESG-SPEE-FQLLPTLARSQPFVDKAK---LQQASSVEEALEIARA 461 (469)
Q Consensus 400 ~~----~-~~~~~~~~~--~~~l~g~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 461 (469)
.. + ..+.|++++ +++|+|+++++. ++.+ +..+..+|+.+.+++.-. +..+|++.|++..+..
T Consensus 410 ~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~~~~~~ 483 (490)
T 2bc0_A 410 EFIEHGNFPVTIKIVYDKDSRRILGAQMAAREDVSMGIHMFSLAIQEGVTIEKLALTDIFFLPHFNKPYNYITM 483 (490)
T ss_dssp TTCCSSCCEEEEEEEEETTTCBEEEEEEEESSCCTTHHHHHHHHHHHTCBHHHHHHSCCCCCTTTCCTTCHHHH
T ss_pred cccCCCCceEEEEEEEECCCCEEEEEEEEcCcCHHHHHHHHHHHHHcCCCHHHHhhcceecCCCCCchhHHHHH
Confidence 11 1 136677774 599999998766 4544 556677888888876432 4678999886554443
No 11
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=3.3e-46 Score=379.27 Aligned_cols=382 Identities=20% Similarity=0.271 Sum_probs=290.3
Q ss_pred CcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCC--CCCCCCCCccccCCCCCCCCHhH
Q 012165 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDK--KPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
+||+|||||+||+++|..|++.+. ..+|+|||+++..+|....+.. ++..... ....+ .....++
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~-g~~V~lie~~~~~~~~~~~~~~-~~~g~~~~~~~~~~-----------~~~~~~~ 67 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHP-DADVTAYEMNDNISFLSCGIAL-YLGKEIKNNDPRGL-----------FYSSPEE 67 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCT-TCEEEEEESSSCCCBCGGGHHH-HHTTCBGGGCGGGG-----------BSCCHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhhCc-CCcEEEEECCCCCCcccccchh-hhcCCcccCCHHHh-----------hhcCHHH
Confidence 489999999999999999999832 3489999999877665433221 1111100 01111 2345677
Q ss_pred HHHCCcEEEeCCcEEEEeCCCcEEEeCC-----CeEEEeccEEeccCCCCCcCCCCCCCCcCcEEEecCHHHHHHHHHhh
Q 012165 130 YKEKGIEMIYQDPVTSIDIEKQTLITNS-----GKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL 204 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~~~v~~~~-----g~~~~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~ 204 (469)
+++.+++++.+++|..++.+.+++.+.+ +.++.||+||+|||++|+ .|.++|.+.+++++++++.+...+.+..
T Consensus 68 ~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~-~p~i~g~~~~~v~~~~~~~~~~~~~~~~ 146 (452)
T 2cdu_A 68 LSNLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPT-VPPIPGIDSSRVYLCKNYNDAKKLFEEA 146 (452)
T ss_dssp HHHTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEEC-CCCCTTTTSTTEEECSSHHHHHHHHHHG
T ss_pred HHHcCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcC-CCCCCCCCCCCEEEeCcHHHHHHHHHHh
Confidence 8899999989888999998888887753 567999999999999987 5667787677899999999998888888
Q ss_pred hcCCeEEEEcCChHHHHHHHHHHhCCCeEe-------------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEE
Q 012165 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTT-------------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVA 265 (469)
Q Consensus 205 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~-------------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~ 265 (469)
..+++++|||+|++|+|+|..|.++|.+|+ .+.+.+++.||++++++.|++++.. ++.+.
T Consensus 147 ~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~v~ 225 (452)
T 2cdu_A 147 PKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEV-DDEII 225 (452)
T ss_dssp GGCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEESSCEEEEEEE-TTEEE
T ss_pred ccCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcC-CCeEE
Confidence 889999999999999999999999999987 3467788999999999999999853 45555
Q ss_pred EEEcCCCCEEeCCEEEEccCCccCCchhhhcCCccc-CCCEEeCCCCCCCCCceEEeccccccCCccCCcccccchHHHH
Q 012165 266 AVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHA 344 (469)
Q Consensus 266 ~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A 344 (469)
.+.+ +|+++++|.||+|+|++|++++++.. ++.+ +|+|.||+++||+.|+|||+|||+..+....+...+...+..|
T Consensus 226 ~v~~-~g~~i~~D~vv~a~G~~p~~~ll~~~-l~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A 303 (452)
T 2cdu_A 226 TKTL-DGKEIKSDIAILCIGFRPNTELLKGK-VAMLDNGAIITDEYMHSSNRDIFAAGDSAAVHYNPTNSNAYIPLATNA 303 (452)
T ss_dssp EEET-TSCEEEESEEEECCCEEECCGGGTTT-SCBCTTSCBCCCTTSBCSSTTEEECSTTBCEEETTTTEEECCCCHHHH
T ss_pred EEEe-CCCEEECCEEEECcCCCCCHHHHHHh-hhcCCCCCEEECCCcCcCCCCEEEcceEEEeccccCCCeeecchHHHH
Confidence 5665 78899999999999999999988877 7764 5779999999999999999999998765444444445678889
Q ss_pred HHHHHHHHHHHhcCCCCCC-CCCCceeeecccccCCCcceeeEEeecCCC-------cEEE-----Ecc--C--C--CcE
Q 012165 345 RQSAQHCIKALLSAQTHTY-DYLPYFYSRVFEYEGSPRKVWWQFFGDNVG-------ETIE-----IGN--F--D--PKI 405 (469)
Q Consensus 345 ~~~a~~~a~~i~~~~~~~~-~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~-------~~~~-----~~~--~--~--~~~ 405 (469)
..||+.+|+||++.. .++ ...|++|+.+|+.. +..+|.... +... ... . . ..+
T Consensus 304 ~~~g~~aa~~i~g~~-~~~~~~~~~~~~~~~~~~-------~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 375 (452)
T 2cdu_A 304 VRQGRLVGLNLTEDK-VKDMGTQSSSGLKLYGRT-------YVSTGINTALAKANNLKVSEVIIADNYRPEFMLSTDEVL 375 (452)
T ss_dssp HHHHHHHHHTSSSCC-CCCCCBCCCEEEEETTEE-------EEEEECCHHHHHHTTCCCEEEEEEEESSCTTBSCCCEEE
T ss_pred HHHHHHHHHHhCCCC-CcCCCccceEEEEECCee-------eEeecCCHHHHHHcCCceEEEEEecCCccccCCCCceEE
Confidence 999999999999643 334 44678889888643 666776532 1111 011 0 1 236
Q ss_pred EEEEEe--CCEEEEEEeecC-ChHH-hHHHHHHHhCCCCCChhh---hcCCCcHHHHHHH
Q 012165 406 ATFWID--SGKLKGVLVESG-SPEE-FQLLPTLARSQPFVDKAK---LQQASSVEEALEI 458 (469)
Q Consensus 406 ~~~~~~--~~~l~g~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 458 (469)
.|++++ +++|+|+++++. ++.+ +..+..+|+.+.+++.-. +..||++.|++..
T Consensus 376 ~k~~~~~~~~~ilG~~~~g~~~~~~~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~~~ 435 (452)
T 2cdu_A 376 MSLVYDPKTRVILGGALSSMHDVSQSANVLSVCIQNKNTIDDLAMVDMLFQPQFDRPFNY 435 (452)
T ss_dssp EEEEECTTTCBEEEEEEEESSCCHHHHHHHHHHHHTTCBHHHHHHSCCCCCTTTCCSSCH
T ss_pred EEEEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhhhhccCCCCCchHHH
Confidence 677774 599999998766 4544 455677788888776432 3568888885443
No 12
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=1.6e-45 Score=374.22 Aligned_cols=377 Identities=19% Similarity=0.222 Sum_probs=279.6
Q ss_pred CcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHHH
Q 012165 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYK 131 (469)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (469)
+||+|||||+||++||.+|++.+. ..+|+|||+++..+|.++.+.. ++.........+ .....+++.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~-g~~V~vie~~~~~g~~~~~~~~-~~~~~~~~~~~~-----------~~~~~~~~~ 69 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYP-QAEISLIDKQATVGYLSGGLSA-YFNHTINELHEA-----------RYITEEELR 69 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCS-SSEEEEECSSSCCSSCCC----------------------------CCCCHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhhCc-CCcEEEEECCCCCcccCccchh-hhcCCCCCHHHh-----------hcCCHHHHH
Confidence 699999999999999999999843 4589999999998887554432 222111111111 234678889
Q ss_pred HCCcEEEeCCcEEEEeCCCcEEEeC---CCeEEEeccEEeccCCCCCcCCCCCCCCcCcEEEecCHHHHHHHHHhhhcCC
Q 012165 132 EKGIEMIYQDPVTSIDIEKQTLITN---SGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAK 208 (469)
Q Consensus 132 ~~~i~~~~~~~v~~id~~~~~v~~~---~g~~~~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~ 208 (469)
+.+++++.+++|+.++++.+.+.+. ++.++.||+||||||++|. .|+++|.+.+++++.++..+...+.+....++
T Consensus 70 ~~gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~-~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~ 148 (452)
T 3oc4_A 70 RQKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQF-STQIRGSQTEKLLKYKFLSGALAAVPLLENSQ 148 (452)
T ss_dssp HTTEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCCBC-CCCCBTTTCTTEEEGGGCC----CCHHHHTCS
T ss_pred HCCCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCcccC-CCCCCCCCCCCEEEeCCHHHHHHHHHHHhcCC
Confidence 9999999999999999999888763 5567999999999999987 56678877788888877777766666667899
Q ss_pred eEEEEcCChHHHHHHHHHHhCCCeEe-------------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEc
Q 012165 209 KVVVVGGGYIGMEVAAAAVGWKLDTT-------------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL 269 (469)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g~~v~-------------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~ 269 (469)
+++|||+|.+|+|+|..+.++|.+++ .+.+.+++.||++++++.|++++.. ++.+ .+.+
T Consensus 149 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v-~v~~ 226 (452)
T 3oc4_A 149 TVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEET-ANGI-VLET 226 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEEEEETCCEEEEEEC-SSCE-EEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccccCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEcc-CCeE-EEEE
Confidence 99999999999999999999999987 3567788899999999999999854 4455 6777
Q ss_pred CCCCEEeCCEEEEccCCccCCchhhhcCCccc-CCCEEeCCCCCCCCCceEEeccccccCCccCCcccccchHHHHHHHH
Q 012165 270 EDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSA 348 (469)
Q Consensus 270 ~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a 348 (469)
++| ++++|.||+|+|++|++++++.. +..+ +|+|.||+++||+.|+|||+|||+..+....+.......+..|..+|
T Consensus 227 ~~g-~i~aD~Vv~A~G~~p~~~~l~~~-~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g 304 (452)
T 3oc4_A 227 SEQ-EISCDSGIFALNLHPQLAYLDKK-IQRNLDQTIAVDAYLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTG 304 (452)
T ss_dssp SSC-EEEESEEEECSCCBCCCSSCCTT-SCBCTTSCBCCCTTCBCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHH
T ss_pred CCC-EEEeCEEEECcCCCCChHHHHhh-hccCCCCCEEECcCccCCCCCEEEEEeeEEeccccCCceeecchHHHHHHHH
Confidence 777 89999999999999999988664 6654 67899999999999999999999987654444433345677899999
Q ss_pred HHHHHHHhcCCCCCCC-CCCceeeecccccCCCcceeeEEeecCCCc-------EE--EEc-------cCCCcEEEEEEe
Q 012165 349 QHCIKALLSAQTHTYD-YLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------TI--EIG-------NFDPKIATFWID 411 (469)
Q Consensus 349 ~~~a~~i~~~~~~~~~-~~p~~~~~~~~~~g~~~~~~~~~~G~~~~~-------~~--~~~-------~~~~~~~~~~~~ 411 (469)
+.+|+||++.. ..+. ..+..++.+|+.+ +..+|.++.+ .. ... +....|.|+.++
T Consensus 305 ~~aa~~i~g~~-~~~~~~~~~~~~~~~~~~-------~a~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~kli~~ 376 (452)
T 3oc4_A 305 LVVANNLEEKT-HRFIGSLRTMGTKVGDYY-------LASTGLTETEGLFFPQTLASIIVRQPAPPLQHGTEILGKLIYD 376 (452)
T ss_dssp HHHTTSSSSCC-CCCCCCCCCEEEEETTEE-------EEEEECCSGGGGGSSSCEEEEEEEEECTTTTCSCEEEEEEEEE
T ss_pred HHHHHHhcCCC-ccCCCccccEEEEEcCee-------EEEecCCHHHHHHCCCceEEEEEecCCccCCCCCeEEEEEEEE
Confidence 99999998753 3343 3445667777643 6667765421 11 110 011247788776
Q ss_pred C--CEEEEEEeecC-ChHH-hHHHHHHHhCCCCCCh-hh--hcCCCcHHH
Q 012165 412 S--GKLKGVLVESG-SPEE-FQLLPTLARSQPFVDK-AK--LQQASSVEE 454 (469)
Q Consensus 412 ~--~~l~g~~~~~~-~~~~-~~~~~~~~~~~~~~~~-~~--~~~~~~~~~ 454 (469)
. ++|+|++++++ ++.+ +..+..+|+.+.+++. .. +..+|++.|
T Consensus 377 ~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~P~~~~ 426 (452)
T 3oc4_A 377 KVTQRVLGAQLCSKNNCLEKINTLALSIQTGQTLTDLLQKDYFYQPSLTN 426 (452)
T ss_dssp TTTCBEEEEEEEESSCCTHHHHHHHHHHHTTCBHHHHHTCCCCCCTTTSC
T ss_pred CCCCEEEEEEEEeCCCHHHHHHHHHHHHHcCCCHHHHHhhHhccCCCCCC
Confidence 4 99999998776 5654 5556667888887763 22 356777776
No 13
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=8.2e-46 Score=378.44 Aligned_cols=390 Identities=22% Similarity=0.325 Sum_probs=267.4
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (469)
++||+|||||+||++||.+|++.+. ..+|+|||+++.++|.++.++. ++.........+.... .. .....+++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~-g~~Vtvie~~~~~~~~~~gl~~-~~~g~~~~~~~~~~~~----~~-~~~~~~~~ 75 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDP-EAHVTMIDQASRISYGGCGIPY-YVSGEVSNIESLQATP----YN-VVRDPEFF 75 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCT-TSEEEEECCC--------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCc-CCCEEEEECCCcccccccccch-hhcCCCCchHHhcccc----ch-hccCHHHH
Confidence 5799999999999999999999943 4589999999999888766654 2211111111110000 00 11233344
Q ss_pred H-HCCcEEEeCCcEEEEeCCCcEEEeCC---Ce--EEEeccEEeccCCCCCcCCCCCCCCcCcEEEecCHHHHHHHHHhh
Q 012165 131 K-EKGIEMIYQDPVTSIDIEKQTLITNS---GK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL 204 (469)
Q Consensus 131 ~-~~~i~~~~~~~v~~id~~~~~v~~~~---g~--~~~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~ 204 (469)
. +.+++++.+++|+.++++.+.+.+.+ |. .+.||+||+|||++|. .|.++|.+.++++++++..+...+.+.+
T Consensus 76 ~~~~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~-~p~i~G~~~~~v~~~~~~~~~~~l~~~l 154 (472)
T 3iwa_A 76 RINKDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKAN-RPPVEGMDLAGVTPVTNLDEAEFVQHAI 154 (472)
T ss_dssp -----CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC-CCSCTTTTSBTEEECCSHHHHHHHHHHC
T ss_pred hhhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcC-CCCCCCCCCCCEEEeCCHHHHHHHHHHh
Confidence 4 58999999999999999999888764 55 7999999999999987 5667887778899998888888776655
Q ss_pred h--cCCeEEEEcCChHHHHHHHHHHhC-CCeEe-------------------eeHHHHHHcCcEEEcCCeEEEEEeCCCC
Q 012165 205 E--KAKKVVVVGGGYIGMEVAAAAVGW-KLDTT-------------------RYEQLYQQNGVKFVKGASIKNLEAGSDG 262 (469)
Q Consensus 205 ~--~~~~vvVvG~G~~g~e~A~~l~~~-g~~v~-------------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~ 262 (469)
. .+++++|||+|.+|+|+|..+.++ |.+++ .+.+.+++.||++++++.|++++.. ++
T Consensus 155 ~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~ 233 (472)
T 3iwa_A 155 SAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGE-NG 233 (472)
T ss_dssp CTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SS
T ss_pred hcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEcc-CC
Confidence 3 479999999999999999999999 99887 3456788999999999999999863 45
Q ss_pred cEEEEEcCCCCEEeCCEEEEccCCccCCchhhhcCCccc-CCCEEeCCCCCCCCCceEEeccccccCCccCCcccccchH
Q 012165 263 RVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHV 341 (469)
Q Consensus 263 ~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~ 341 (469)
.+. +.+++|+++++|.||+|+|++|++++++++|++.+ +|+|.||+++||+.|+|||+|||+..+....|.......+
T Consensus 234 ~v~-v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~ 312 (472)
T 3iwa_A 234 KVA-RVITDKRTLDADLVILAAGVSPNTQLARDAGLELDPRGAIIVDTRMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLG 312 (472)
T ss_dssp BEE-EEEESSCEEECSEEEECSCEEECCHHHHHHTCCBCTTCCEECCTTCBCSSTTEEECGGGEEEEBTTTSSEECCCCT
T ss_pred eEE-EEEeCCCEEEcCEEEECCCCCcCHHHHHhCCccCCCCCCEEECCCcccCCCCEEEeccceecccccCCceeecchH
Confidence 553 77889999999999999999999999888899875 6889999999999999999999998766555554445566
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceeeecccccCCCcceeeEEeecCCCc-------EE--EEc---------cCCC
Q 012165 342 DHARQSAQHCIKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------TI--EIG---------NFDP 403 (469)
Q Consensus 342 ~~A~~~a~~~a~~i~~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~~-------~~--~~~---------~~~~ 403 (469)
..|..||+.+|+||++........+|++|+.+|+.+ +..+|.+..+ .. ... +...
T Consensus 313 ~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~-------~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~ 385 (472)
T 3iwa_A 313 SMANRQGRVIGTNLADGDATFPGAVGSWAVKLFEGS-------ASGAGLTVEGALREGYDAVNVHVEQFDRAHFYPEKTI 385 (472)
T ss_dssp THHHHHHHHHHHHHTTCCCCCCCBCCCEEEECSSCE-------EEEEECCHHHHHHTTCCEEEEEEEC-----------C
T ss_pred HHHHHHHHHHHHHhcCCCccCCCCCcceEEEECCce-------eEEEECCHHHHHHcCCceEEEEEecCCccCccCCCce
Confidence 779999999999999754433345677887777643 6667765321 11 110 0112
Q ss_pred cEEEEEEe--CCEEEEEEeecC---Ch-HHhHHHHHHHhCCCCCCh-hhh-cC-CCcHHHHHH
Q 012165 404 KIATFWID--SGKLKGVLVESG---SP-EEFQLLPTLARSQPFVDK-AKL-QQ-ASSVEEALE 457 (469)
Q Consensus 404 ~~~~~~~~--~~~l~g~~~~~~---~~-~~~~~~~~~~~~~~~~~~-~~~-~~-~~~~~~~~~ 457 (469)
.|.|+.++ +++|+|+++++. .+ +.+..+..+|+.+.+++. ..+ .. +|++.|++.
T Consensus 386 ~~~kli~~~~~~~ilG~~~~g~~~~~~~~~i~~~~~ai~~~~t~~~l~~~~~~~~P~~~~~~~ 448 (472)
T 3iwa_A 386 MTLQLVVDRPTRRVLGIQGFSTLGDALTARINAVATMLASKPTVEDISNAEVVYSPPFASAMD 448 (472)
T ss_dssp EEEEEEEETTTCBEEEEEEEESCHHHHHHHHHHHHHHHTTCCBHHHHHTCCCC--------CC
T ss_pred EEEEEEEECCCCEEEEEEEECCCcccHHHHHHHHHHHHHcCCCHHHHhcccccCCCCCCCccc
Confidence 36777774 699999998666 22 335555666788877663 222 33 388888543
No 14
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=4.9e-45 Score=373.09 Aligned_cols=405 Identities=19% Similarity=0.274 Sum_probs=288.1
Q ss_pred cCCcccccccccccccccCCCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCC
Q 012165 29 HSSAKNFQRRGFVVAYSSFANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKP 108 (469)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~ 108 (469)
..+||...++. .....+....++||+|||||+||+++|..|++.+. ..+|+|||+++..+|.++.++. ++.......
T Consensus 15 ~~~np~~g~~~-~~~~~~~~~~~~dvvIIG~G~aGl~aA~~l~~~~~-g~~V~lie~~~~~~~~~~~~~~-~~~~~~~~~ 91 (480)
T 3cgb_A 15 MTGGQQMGRTL-YDDDDKDRWGSMNYVIIGGDAAGMSAAMQIVRNDE-NANVVTLEKGEIYSYAQCGLPY-VISGAIAST 91 (480)
T ss_dssp -----------------------CEEEEECCSHHHHHHHHHHHHHCT-TCEEEEECSSSCCSBCGGGHHH-HHTTSSSCG
T ss_pred ccchhhhcccc-cCCCCcCccccceEEEECCCHHHHHHHHHHHhhCc-CCcEEEEECCCCCCCCCCCcch-hhcCCcCCH
Confidence 45666544432 21112222235799999999999999999999743 4489999999887776554432 221111111
Q ss_pred CCCCCCccccCCCCCCCCHhHH-HHCCcEEEeCCcEEEEeCCCcEEEeCC---Ce--EEEeccEEeccCCCCCcCCCCCC
Q 012165 109 ARLPGFHTCVGSGGERQTPEWY-KEKGIEMIYQDPVTSIDIEKQTLITNS---GK--LLKYGSLIVATGCTASRFPEKIG 182 (469)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~v~~id~~~~~v~~~~---g~--~~~yd~lVlAtG~~~~~~~~~~g 182 (469)
..+ .....+++ +..+++++.+++|+.++.+.++|.+.+ |+ ++.||+||+|||++|+ .|.++|
T Consensus 92 ~~l-----------~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~-~p~i~G 159 (480)
T 3cgb_A 92 EKL-----------IARNVKTFRDKYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPV-MPEWEG 159 (480)
T ss_dssp GGG-----------BSSCHHHHHHTTCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC-CCCCBT
T ss_pred HHh-----------hhcCHHHHHhhcCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCccc-CCCCCC
Confidence 111 12345666 445999999889999999888887753 65 7999999999999987 566778
Q ss_pred CCcCcEEEecCHHHHHHHHHhhh--cCCeEEEEcCChHHHHHHHHHHhCCCeEe------------------eeHHHHHH
Q 012165 183 GYLPGVHYIRDVADADALISSLE--KAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------------RYEQLYQQ 242 (469)
Q Consensus 183 ~~~~~v~~~~~~~~~~~~~~~~~--~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------------~~~~~l~~ 242 (469)
.+.++++++++..+...+.+.+. .+++++|||+|++|+|+|..|.++|.+|+ .+.+.+++
T Consensus 160 ~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~ 239 (480)
T 3cgb_A 160 RDLQGVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTIYDGDMAEYIYKEADK 239 (480)
T ss_dssp TTSBTEECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSSSCHHHHHHHHHHHHH
T ss_pred ccCCCEEEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhcCCHHHHHHHHHHHHH
Confidence 76678888888888877776665 78999999999999999999999999987 34567888
Q ss_pred cCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCchhhhcCCccc-CCCEEeCCCCCCCCCceEEe
Q 012165 243 NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAI 321 (469)
Q Consensus 243 ~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~Vd~~~~t~~~~Vfa~ 321 (469)
.||++++++.+++++.+ +.+..+.++ +.++++|.||+|+|++|++++++++|++.+ +|+|.||+++||++|+|||+
T Consensus 240 ~Gv~i~~~~~v~~i~~~--~~v~~v~~~-~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~~~G~I~Vd~~~~ts~p~IyA~ 316 (480)
T 3cgb_A 240 HHIEILTNENVKAFKGN--ERVEAVETD-KGTYKADLVLVSVGVKPNTDFLEGTNIRTNHKGAIEVNAYMQTNVQDVYAA 316 (480)
T ss_dssp TTCEEECSCCEEEEEES--SBEEEEEET-TEEEECSEEEECSCEEESCGGGTTSCCCBCTTSCBCCCTTSBCSSTTEEEC
T ss_pred cCcEEEcCCEEEEEEcC--CcEEEEEEC-CCEEEcCEEEECcCCCcChHHHHhCCcccCCCCCEEECCCccCCCCCEEEe
Confidence 99999999999999853 445456665 458999999999999999999999998875 57899999999999999999
Q ss_pred ccccccCCccCCcccccchHHHHHHHHHHHHHHHhcCCCCCCC-CCCceeeecccccCCCcceeeEEeecCCC-------
Q 012165 322 GDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYD-YLPYFYSRVFEYEGSPRKVWWQFFGDNVG------- 393 (469)
Q Consensus 322 GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~~~~~-~~p~~~~~~~~~~g~~~~~~~~~~G~~~~------- 393 (469)
|||+..+....|...+...+..|..||+.+|++|++. ..++. ..+++|+.+++.. +..+|....
T Consensus 317 GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~-~~~~~~~~~~~~~~~~~~~-------~~~vG~~~~~a~~~g~ 388 (480)
T 3cgb_A 317 GDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLDK-RRAFKGTLGTGIIKFMNLT-------LARTGLNEKEAKGLHI 388 (480)
T ss_dssp GGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTC-CCCCCCBCCCEEEEETTEE-------EEEEECCHHHHHHTTC
T ss_pred eeEEEecCCCCCcceecchHHHHHHHHHHHHHHhcCC-CccCCCccceeEEEECCcE-------EEEeCCCHHHHHHcCC
Confidence 9999876544444434457888999999999999964 34443 3456677777643 666775432
Q ss_pred cE---EEEcc--C----C--CcEEEEEEe--CCEEEEEEeecCC-hH-HhHHHHHHHhCCCCCCh-hh--hcCCCcHHHH
Q 012165 394 ET---IEIGN--F----D--PKIATFWID--SGKLKGVLVESGS-PE-EFQLLPTLARSQPFVDK-AK--LQQASSVEEA 455 (469)
Q Consensus 394 ~~---~~~~~--~----~--~~~~~~~~~--~~~l~g~~~~~~~-~~-~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~ 455 (469)
+. ..... . . ..|.+++++ +++|+|+++++.. +. .+..+..+|+.+.+++. .. +..+|++.|+
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~vg~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~ 468 (480)
T 3cgb_A 389 PYKTVKVDSTNMAGYYPNAKPLYLKLLYRSDTKQLLGGQVIGEEGVDKRIDVIAMALFNKMSIHDLEDVDLSYAPPYNSV 468 (480)
T ss_dssp CEEEEEEEEESSCTTSTTCCEEEEEEEEETTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCCCCCCTTTCCS
T ss_pred ceEEEEEecCCcccccCCCceEEEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCHHHHhhcccccCCCCCCc
Confidence 11 11111 0 1 126677774 6999999987776 54 45566778898888773 33 2467998886
Q ss_pred HHHH
Q 012165 456 LEIA 459 (469)
Q Consensus 456 ~~~~ 459 (469)
+..+
T Consensus 469 ~~~~ 472 (480)
T 3cgb_A 469 WDPI 472 (480)
T ss_dssp SCHH
T ss_pred hhHH
Confidence 5444
No 15
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=2.8e-44 Score=357.46 Aligned_cols=349 Identities=21% Similarity=0.259 Sum_probs=270.1
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCC-CCHh
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGER-QTPE 128 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 128 (469)
.++||+|||||+||++||..|++.|+ +.+|+++|+++...|.++.+++.+.. ......+ .. ....
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~-~~~V~lie~~~g~~~~~~~l~~~~~~--~~~~~~~-----------~~~~~~~ 68 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDG-ETPLLMITADDGRSYSKPMLSTGFSK--NKDADGL-----------AMAEPGA 68 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCS-SSCEEEECSSCCCEECGGGGGGTTTT--TCCHHHH-----------EEECHHH
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCC-CCCEEEEECCCCCccCcccccHHHhC--CCCHHHh-----------hccCHHH
Confidence 35899999999999999999999986 66899999998777777766653221 1111111 11 2345
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCCcCCCCCCCCcCcEEEecCHHHHHHHHHhhhcCC
Q 012165 129 WYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAK 208 (469)
Q Consensus 129 ~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~ 208 (469)
++++.+++++.+++|..++.+.++|.+.++ ++.||+||+|||++|. .|+++|.+.+++++.+++.+...+...+..++
T Consensus 69 ~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~-~~~~d~lviAtG~~p~-~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~ 146 (384)
T 2v3a_A 69 MAEQLNARILTHTRVTGIDPGHQRIWIGEE-EVRYRDLVLAWGAEPI-RVPVEGDAQDALYPINDLEDYARFRQAAAGKR 146 (384)
T ss_dssp HHHHTTCEEECSCCCCEEEGGGTEEEETTE-EEECSEEEECCCEEEC-CCCCBSTTTTCEEECSSHHHHHHHHHHHTTCC
T ss_pred HHHhCCcEEEeCCEEEEEECCCCEEEECCc-EEECCEEEEeCCCCcC-CCCCCCcCcCCEEEECCHHHHHHHHHhhccCC
Confidence 668899999988899999998889988654 6999999999999987 56677766678899999998888877777899
Q ss_pred eEEEEcCChHHHHHHHHHHhCCCeEe-------------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEc
Q 012165 209 KVVVVGGGYIGMEVAAAAVGWKLDTT-------------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL 269 (469)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g~~v~-------------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~ 269 (469)
+++|||+|++|+|+|..|.++|.+++ .+.+.+++.||++++++.+++++.++ +. ..+.+
T Consensus 147 ~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~-~~v~~ 224 (384)
T 2v3a_A 147 RVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAG-EG-LEAHL 224 (384)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEET-TE-EEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecC-CE-EEEEE
Confidence 99999999999999999999999987 34567788999999999999998643 33 36788
Q ss_pred CCCCEEeCCEEEEccCCccCCchhhhcCCcccCCCEEeCCCCCCCCCceEEeccccccCCccCCcccccchHHHHHHHHH
Q 012165 270 EDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQ 349 (469)
Q Consensus 270 ~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~ 349 (469)
++|+++++|.||+|+|.+|++++++++|++.++| |.||+++||+.|+|||+|||+..+... ..++..|..||+
T Consensus 225 ~~g~~i~~d~vv~a~G~~p~~~l~~~~g~~~~~g-i~vd~~~~t~~~~IyA~GD~~~~~~~~------~~~~~~a~~~g~ 297 (384)
T 2v3a_A 225 SDGEVIPCDLVVSAVGLRPRTELAFAAGLAVNRG-IVVDRSLRTSHANIYALGDCAEVDGLN------LLYVMPLMACAR 297 (384)
T ss_dssp TTSCEEEESEEEECSCEEECCHHHHHTTCCBSSS-EEECTTCBCSSTTEEECGGGEEETTBC------CCSHHHHHHHHH
T ss_pred CCCCEEECCEEEECcCCCcCHHHHHHCCCCCCCC-EEECCCCCCCCCCEEEeeeeeeECCCC------cchHHHHHHHHH
Confidence 8999999999999999999998999999988765 999999999999999999999754321 236777999999
Q ss_pred HHHHHHhcCCCCCC--CCCCceeeecccccCCCcceeeEEeecCCC---cEEEEccCCCcEEEEEEe-CCEEEEEEeecC
Q 012165 350 HCIKALLSAQTHTY--DYLPYFYSRVFEYEGSPRKVWWQFFGDNVG---ETIEIGNFDPKIATFWID-SGKLKGVLVESG 423 (469)
Q Consensus 350 ~~a~~i~~~~~~~~--~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~---~~~~~~~~~~~~~~~~~~-~~~l~g~~~~~~ 423 (469)
.+|+||++.. .++ ..+|+.+ |.. + ..++..|.... .....++ ...|.+++++ +|+|+|+++++.
T Consensus 298 ~~a~~i~g~~-~~~~~~~~p~~~---~~~-~----~~~~~~g~~~~~~~~~~~~~~-~~g~~~~~~~~~~~i~G~~~~g~ 367 (384)
T 2v3a_A 298 ALAQTLAGNP-SQVAYGPMPVTV---KTP-A----CPLVVSPPPRGMDGQWLVEGS-GTDLKVLCRDTAGRVIGYALTGA 367 (384)
T ss_dssp HHHHHHTTCC-CCCCCCCCCEEE---CCT-T----SCEEEECCCTTCCCEEEEEEE-TTEEEEEEECTTSCEEEEEEEGG
T ss_pred HHHHHhcCCC-ccCCCCCcceEE---EEC-C----eeEEEecCCCCCCceEEEEec-CCcEEEEEEccCCEEEEEEEECc
Confidence 9999999743 444 4566532 211 1 12666775432 2233333 2347788775 799999998777
Q ss_pred ChHHhHHHHH
Q 012165 424 SPEEFQLLPT 433 (469)
Q Consensus 424 ~~~~~~~~~~ 433 (469)
.+.++..+.+
T Consensus 368 ~a~e~~~~~~ 377 (384)
T 2v3a_A 368 AVNEKLALNK 377 (384)
T ss_dssp GGGGHHHHHT
T ss_pred chHHHHHHHH
Confidence 7766555443
No 16
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=1e-44 Score=368.06 Aligned_cols=378 Identities=21% Similarity=0.260 Sum_probs=278.7
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
+++||+|||||+||+++|..|++.+. ..+|+|||+++..+|....++. ++... .....+ .....++
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~-~~~V~vie~~~~~~~~~~~~p~-~~~~~-~~~~~~-----------~~~~~~~ 67 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKP-EWDVKVFEATEWVSHAPCGIPY-VVEGL-STPDKL-----------MYYPPEV 67 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCT-TSEEEEECSSSCCC-------------------------------------CT
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCc-CCCEEEEECCCccccCCcCCcc-ccCCC-CCHHHh-----------hhcCHHH
Confidence 35799999999999999999999854 5589999999987665433332 11111 111111 1223344
Q ss_pred H-HHCCcEEEeCCcEEEEeCCCcEEEeCCC-eEEEeccEEeccCCCCCcCCCCCCCCcCcEEEecCHHHHHHHHHhhh--
Q 012165 130 Y-KEKGIEMIYQDPVTSIDIEKQTLITNSG-KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE-- 205 (469)
Q Consensus 130 ~-~~~~i~~~~~~~v~~id~~~~~v~~~~g-~~~~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~-- 205 (469)
+ ++.+++++.+++|+.++.+.+.+.+.++ .++.||+||||||++|+ .|.++|.+.+++++.++..+...+.+...
T Consensus 68 ~~~~~gi~v~~~~~v~~i~~~~~~v~~~~g~~~~~~d~lviAtG~~p~-~p~i~G~~~~~v~~~~~~~~~~~~~~~~~~~ 146 (449)
T 3kd9_A 68 FIKKRGIDLHLNAEVIEVDTGYVRVRENGGEKSYEWDYLVFANGASPQ-VPAIEGVNLKGVFTADLPPDALAIREYMEKY 146 (449)
T ss_dssp HHHHTTCEEETTCEEEEECSSEEEEECSSSEEEEECSEEEECCCEEEC-CCSCBTTTSTTEECSCSTHHHHHHHHHHSSS
T ss_pred HHHhcCcEEEecCEEEEEecCCCEEEECCceEEEEcCEEEECCCCCCC-CCCCCCCCCCCEEEeCCHHHHHHHHHHHHhc
Confidence 4 6899999999999999998888988887 47999999999999986 56778877788888888888877777665
Q ss_pred cCCeEEEEcCChHHHHHHHHHHhCCCeEe-------------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEE
Q 012165 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTT-------------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAA 266 (469)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~v~-------------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~ 266 (469)
.+++++|||+|++|+|+|..|.++|.+|+ .+.+.+++. |++++++.+.+++.+ +.+..
T Consensus 147 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~--~~v~~ 223 (449)
T 3kd9_A 147 KVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEVTDILEEKLKKH-VNLRLQEITMKIEGE--ERVEK 223 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHTTT-SEEEESCCEEEEECS--SSCCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhC-cEEEeCCeEEEEecc--CcEEE
Confidence 78999999999999999999999999987 345667778 999999999999853 23323
Q ss_pred EEcCCCCEEeCCEEEEccCCccCCchhhhcCCccc-CCCEEeCCCCCCCCCceEEeccccccCCccCCcccccchHHHHH
Q 012165 267 VKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHAR 345 (469)
Q Consensus 267 v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~ 345 (469)
+ +.+++++++|.||+|+|++|++++++.+|++.+ +|+|.||+++||+.|+|||+|||+..+....|.......+..|.
T Consensus 224 v-~~~g~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~ 302 (449)
T 3kd9_A 224 V-VTDAGEYKAELVILATGIKPNIELAKQLGVRIGETGAIWTNEKMQTSVENVYAAGDVAETRHVITGRRVWVPLAPAGN 302 (449)
T ss_dssp E-EETTEEEECSEEEECSCEEECCHHHHHTTCCBCTTSSBCCCTTCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHH
T ss_pred E-EeCCCEEECCEEEEeeCCccCHHHHHhCCccCCCCCCEEECCCCccCCCCEEEeeeeeeeccccCCceEEeccHHHHH
Confidence 3 457788999999999999999999999999876 57799999999999999999999987655445444455778899
Q ss_pred HHHHHHHHHHhcCCCCCC-CCCCceeeecccccCCCcceeeEEeecCCC-------cEEE-----Ecc--C----CCcEE
Q 012165 346 QSAQHCIKALLSAQTHTY-DYLPYFYSRVFEYEGSPRKVWWQFFGDNVG-------ETIE-----IGN--F----DPKIA 406 (469)
Q Consensus 346 ~~a~~~a~~i~~~~~~~~-~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~-------~~~~-----~~~--~----~~~~~ 406 (469)
.+|+.+|+||++... .+ ...|++|+.+++.+ +..+|.+.. +... .+. . ...|.
T Consensus 303 ~~g~~aa~~i~g~~~-~~~~~~~~~~~~~~~~~-------~~~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (449)
T 3kd9_A 303 KMGYVAGSNIAGKEL-HFPGVLGTAVTKFMDVE-------IGKTGLTEMEALKEGYDVRTAFIKASTRPHYYPGGREIWL 374 (449)
T ss_dssp HHHHHHHHHHTTCCC-CCCCBCCCEEEEETTEE-------EEEEECCHHHHHHTTCCEEEEEEEEESSCTTSTTCCEEEE
T ss_pred HHHHHHHHHhcCCCc-cCCCcccceEEEEcCcE-------EEEecCCHHHHHHCCCceEEEEEecCCccccCCCCceEEE
Confidence 999999999997543 44 34577788777654 667776532 1111 110 0 12377
Q ss_pred EEEEeC--CEEEEEEeecCChHHhHH-HHHHHhCCCCCCh-hh--hcCCCcHHH
Q 012165 407 TFWIDS--GKLKGVLVESGSPEEFQL-LPTLARSQPFVDK-AK--LQQASSVEE 454 (469)
Q Consensus 407 ~~~~~~--~~l~g~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~--~~~~~~~~~ 454 (469)
|+.++. ++|+|+++++.++.++.. +..+|+.+.+++. .. +..+|++++
T Consensus 375 kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~p~~~~ 428 (449)
T 3kd9_A 375 KGVVDNETNRLLGVQVVGSDILPRIDTAAAMLMAGFTTKDAFFTDLAYAPPFAP 428 (449)
T ss_dssp EEEEETTTCBEEEEEEEESSCHHHHHHHHHHHHTTCBHHHHHTCCCCCBTTTBC
T ss_pred EEEEECCCCEEEEEEEEChHHHHHHHHHHHHHHcCCcHHHHhhcccccCCCCCC
Confidence 887764 999999998777765444 5556788877653 22 245666665
No 17
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=2.6e-44 Score=375.82 Aligned_cols=369 Identities=20% Similarity=0.347 Sum_probs=282.4
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (469)
|++|+|||||+||++||.+|++.+. ..+|+|||+++.++|.++.++. ++.........+ .....+++
T Consensus 1 M~~VvIIGgG~AGl~aA~~L~~~~~-~~~V~lie~~~~~~~~~~~l~~-~~~~~~~~~~~~-----------~~~~~~~~ 67 (565)
T 3ntd_A 1 MKKILIIGGVAGGASAAARARRLSE-TAEIIMFERGEYVSFANCGLPY-HISGEIAQRSAL-----------VLQTPESF 67 (565)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCS-SSEEEEECSSSCSSBCGGGHHH-HHTSSSCCGGGG-----------BCCCHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCc-CCCEEEEECCCCccccccCchH-HhcCCcCChHHh-----------hccCHHHH
Confidence 3689999999999999999999964 5699999999998887666553 222111111110 12344555
Q ss_pred H-HCCcEEEeCCcEEEEeCCCcEEEeCC---Ce--EEEeccEEeccCCCCCcCCCCCCCCcCcEEEecCHHHHHHHHHhh
Q 012165 131 K-EKGIEMIYQDPVTSIDIEKQTLITNS---GK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL 204 (469)
Q Consensus 131 ~-~~~i~~~~~~~v~~id~~~~~v~~~~---g~--~~~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~ 204 (469)
. +.+++++.+++|+.++++.+.+++.+ |. ++.||+||||||++|+ .|.++|.+.+++++.++..+.+.+.+.+
T Consensus 68 ~~~~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~-~p~ipG~~~~~v~~~~~~~~~~~l~~~~ 146 (565)
T 3ntd_A 68 KARFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPI-VPPIPGVDNPLTHSLRNIPDMDRILQTI 146 (565)
T ss_dssp HHHHCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC-CCCCTTCCSTTEECCSSHHHHHHHHHHH
T ss_pred HHhcCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCC-CCCCCCCCCCCEEEeCCHHHHHHHHHHH
Confidence 4 58999999999999999999887753 43 7899999999999987 5667887778888888888887776543
Q ss_pred --hcCCeEEEEcCChHHHHHHHHHHhCCCeEe------------------eeHHHHHHcCcEEEcCCeEEEEEeC-----
Q 012165 205 --EKAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------------RYEQLYQQNGVKFVKGASIKNLEAG----- 259 (469)
Q Consensus 205 --~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------------~~~~~l~~~gV~~~~~~~v~~i~~~----- 259 (469)
..+++++|||+|++|+|+|..|.++|.+|+ .+.+.+++.||++++++.+++++.+
T Consensus 147 ~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~ 226 (565)
T 3ntd_A 147 QMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTPVDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHV 226 (565)
T ss_dssp HHTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCC
T ss_pred hhCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchhcCHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccc
Confidence 357899999999999999999999999987 3456788999999999999999862
Q ss_pred -------------CCCcEEEEEcCCCCEEeCCEEEEccCCccCCchhhhcCCccc-CCCEEeCCCCCCCCCceEEecccc
Q 012165 260 -------------SDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVA 325 (469)
Q Consensus 260 -------------~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~Vd~~~~t~~~~Vfa~GD~a 325 (469)
+++.+ .+.+.+|+++++|.||+|+|++|++++++.+|++.+ +|+|.||+++||+.|+|||+|||+
T Consensus 227 ~~~~~~~~~~~~~~~~~~-~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~ 305 (565)
T 3ntd_A 227 ASDAAGEDTAHQHIKGHL-SLTLSNGELLETDLLIMAIGVRPETQLARDAGLAIGELGGIKVNAMMQTSDPAIYAVGDAV 305 (565)
T ss_dssp CCGGGTCCCTTCCTTCEE-EEEETTSCEEEESEEEECSCEEECCHHHHHHTCCBCTTSSBCCCTTCBCSSTTEEECGGGB
T ss_pred cccccccccccccCCCcE-EEEEcCCCEEEcCEEEECcCCccchHHHHhCCcccCCCCCEEECCCcccCCCCEEEeeeeE
Confidence 24444 467789999999999999999999999988898876 688999999999999999999999
Q ss_pred ccCCccCCcccccchHHHHHHHHHHHHHHHhcCCCCCCCCC-CceeeecccccCCCcceeeEEeecCCCc---------E
Q 012165 326 AFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYDYL-PYFYSRVFEYEGSPRKVWWQFFGDNVGE---------T 395 (469)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~~~~~~~-p~~~~~~~~~~g~~~~~~~~~~G~~~~~---------~ 395 (469)
..+....|......++..|..||+.+|+||++.. ..|... ++.|+.+|+.+ +..+|.+..+ .
T Consensus 306 ~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~~~~~~~~~~~-------~~~vG~~e~~a~~~g~~~~~ 377 (565)
T 3ntd_A 306 EEQDFVTGQACLVPLAGPANRQGRMAADNMFGRE-ERYQGTQGTAICKVFDLA-------VGATGKNEKQLKQAGIAFEK 377 (565)
T ss_dssp CEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCC-CCCCCBCCCEEEEETTEE-------EEEEECCHHHHHHTTCCCEE
T ss_pred eeccccCCceeecccHHHHHHHHHHHHHHhcCCC-ccCCCcccceEEEEcCcE-------EEEecCCHHHHHHcCCCeEE
Confidence 8776555655455678889999999999999754 346544 45556677643 6667765321 1
Q ss_pred EEE---cc--C--C--CcEEEEEEe--CCEEEEEEeecCCh-HH-hHHHHHHHhCCCCCC
Q 012165 396 IEI---GN--F--D--PKIATFWID--SGKLKGVLVESGSP-EE-FQLLPTLARSQPFVD 442 (469)
Q Consensus 396 ~~~---~~--~--~--~~~~~~~~~--~~~l~g~~~~~~~~-~~-~~~~~~~~~~~~~~~ 442 (469)
... +. . . ..|.|+.++ +++|+|+++++.++ .+ +..+..+|+.+.+++
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~k~v~~~~~~~ilG~~~~g~~a~~e~i~~~~~ai~~~~~~~ 437 (565)
T 3ntd_A 378 VYVHTASHASYYPGAEVVSFKLLFDPVKGTIFGAQAVGKDGIDKRIDVMAVAQRAGMTVE 437 (565)
T ss_dssp EEEEEESSCTTSTTCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBHH
T ss_pred EEEecCcccCcCCCCceEEEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCHH
Confidence 111 10 1 1 136788874 69999999988776 44 555555677777665
No 18
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=6.5e-45 Score=369.22 Aligned_cols=383 Identities=20% Similarity=0.285 Sum_probs=285.5
Q ss_pred CcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHHH
Q 012165 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYK 131 (469)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (469)
+||+|||||+||++||..|++.+. ..+|+|||+++..+|....+.. ++........++ .....++++
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~-g~~V~lie~~~~~~~~~~~~~~-~~~~~~~~~~~~-----------~~~~~~~~~ 67 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHP-DAEIQWYEKGDFISFLSAGMQL-YLEGKVKDVNSV-----------RYMTGEKME 67 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT-TSEEEEEESSSSSSBCGGGHHH-HHTTSSCCGGGS-----------BSCCHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHhCc-CCeEEEEECCCccCcccccchh-hhcCccCCHHHh-----------hcCCHHHHH
Confidence 389999999999999999999842 4489999999887665333221 111110111111 234567888
Q ss_pred HCCcEEEeCCcEEEEeCCCcEEEeCC---Ce--EEEeccEEeccCCCCCcCCCCCCCCcCcEEEecCHHHHHHHHHhhh-
Q 012165 132 EKGIEMIYQDPVTSIDIEKQTLITNS---GK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE- 205 (469)
Q Consensus 132 ~~~i~~~~~~~v~~id~~~~~v~~~~---g~--~~~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~- 205 (469)
+.+++++.+++++.++.+.++|.+.+ |+ ++.||+||||||++|. .|.++|.+.++++++++..+...+.+.+.
T Consensus 68 ~~gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~-~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~ 146 (447)
T 1nhp_A 68 SRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPF-ELDIPGKDLDNIYLMRGRQWAIKLKQKTVD 146 (447)
T ss_dssp HTTCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC-CCCSTTTTSBSEECCCHHHHHHHHHHHHTC
T ss_pred HCCCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcC-CCCCCCCCCCCeEEECCHHHHHHHHHHhhh
Confidence 89999989999999999888887753 54 4899999999999987 56678876778888888888877777666
Q ss_pred -cCCeEEEEcCChHHHHHHHHHHhCCCeEe-------------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEE
Q 012165 206 -KAKKVVVVGGGYIGMEVAAAAVGWKLDTT-------------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVA 265 (469)
Q Consensus 206 -~~~~vvVvG~G~~g~e~A~~l~~~g~~v~-------------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~ 265 (469)
.+++++|||+|++|+|+|..|+++|.+++ .+.+.+++.||++++++.+++++.+ +.+.
T Consensus 147 ~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~v~ 224 (447)
T 1nhp_A 147 PEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGD--GRVQ 224 (447)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEESCCEEEEECS--SBCC
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccccCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEcc--CcEE
Confidence 78999999999999999999999999987 3456678899999999999999843 4443
Q ss_pred EEEcCCCCEEeCCEEEEccCCccCCchhhhcCCccc-CCCEEeCCCCCCCCCceEEeccccccCCccCCcccccchHHHH
Q 012165 266 AVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHA 344 (469)
Q Consensus 266 ~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A 344 (469)
.+.+ +++++++|.||+|+|.+|+++++++. ++.+ +|+|.||+++||+.|+|||+|||+..+....+...+..++..|
T Consensus 225 ~v~~-~~~~i~~d~vi~a~G~~p~~~~~~~~-~~~~~~G~i~Vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A 302 (447)
T 1nhp_A 225 KVVT-DKNAYDADLVVVAVGVRPNTAWLKGT-LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNA 302 (447)
T ss_dssp EEEE-SSCEEECSEEEECSCEEESCGGGTTT-SCBCTTSCBCCCTTCBCSSTTEEECGGGSCEEEGGGTEEECCCCHHHH
T ss_pred EEEE-CCCEEECCEEEECcCCCCChHHHHhh-hhhcCCCcEEECccccCCCCCEEEeeeEEEeeccCCCCceechhHHHH
Confidence 4555 56789999999999999999988877 7664 5779999999999999999999998655444443345578889
Q ss_pred HHHHHHHHHHHhcCCCCCCC-CCCceeeecccccCCCcceeeEEeecCCC-------cEE---E--Ecc--C--C--CcE
Q 012165 345 RQSAQHCIKALLSAQTHTYD-YLPYFYSRVFEYEGSPRKVWWQFFGDNVG-------ETI---E--IGN--F--D--PKI 405 (469)
Q Consensus 345 ~~~a~~~a~~i~~~~~~~~~-~~p~~~~~~~~~~g~~~~~~~~~~G~~~~-------~~~---~--~~~--~--~--~~~ 405 (469)
..||+.+|+||++.. .++. ..+++|+..++.. +..+|.... +.. . ... . . ..|
T Consensus 303 ~~qg~~aa~~i~g~~-~~~~~~~~~~~~~~~~~~-------~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 374 (447)
T 1nhp_A 303 RKQGRFAVKNLEEPV-KPFPGVQGSSGLAVFDYK-------FASTGINEVMAQKLGKETKAVTVVEDYLMDFNPDKQKAW 374 (447)
T ss_dssp HHHHHHHHHTSSSCC-CCCCCBCCCEEEEETTEE-------EEEEECCHHHHHHHTCCCEEEEEEEESSCTTCTTCCEEE
T ss_pred HHHHHHHHHhhcCCC-CCCCCccccEEEEECCee-------eEEecCCHHHHHHcCCceEEEEEEcCCccccCCCCceEE
Confidence 999999999999643 3443 4577888877653 566775432 111 1 110 0 1 136
Q ss_pred EEEEEe--CCEEEEEEeecCC-hHH-hHHHHHHHhCCCCCChhh---hcCCCcHHHHHHHHH
Q 012165 406 ATFWID--SGKLKGVLVESGS-PEE-FQLLPTLARSQPFVDKAK---LQQASSVEEALEIAR 460 (469)
Q Consensus 406 ~~~~~~--~~~l~g~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 460 (469)
.|++++ +++|+|+++++.. +.+ +..+..+|+.+.+++.-. +..||+++|++..+.
T Consensus 375 ~k~~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~~~~~ 436 (447)
T 1nhp_A 375 FKLVYDPETTQILGAQLMSKADLTANINAISLAIQAKMTIEDLAYADFFFQPAFDKPWNIIN 436 (447)
T ss_dssp EEEEECTTTCBEEEEEEEESSCCTTHHHHHHHHHHTTCBHHHHHTCCCCCCTTTCCSSCHHH
T ss_pred EEEEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhcceecCCCCCCcccHHH
Confidence 677775 5999999987776 544 555677888888877433 356888888654443
No 19
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=2.3e-42 Score=362.37 Aligned_cols=389 Identities=20% Similarity=0.302 Sum_probs=279.3
Q ss_pred cCCcccccccccccccccCCCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCC
Q 012165 29 HSSAKNFQRRGFVVAYSSFANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKP 108 (469)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~ 108 (469)
..+||...++. .....+..+++++|+|||||+||++||.+|++.+. ..+|+|+|+++.++|..+.++. ++.......
T Consensus 15 ~~~np~~g~e~-~~~~~~~~~~~~~VvIIGgG~AGl~aA~~L~~~~~-g~~V~vie~~~~~~~~~~~lp~-~~~g~~~~~ 91 (588)
T 3ics_A 15 MTGGQQMGRTL-YDDDDKDRWGSRKIVVVGGVAGGASVAARLRRLSE-EDEIIMVERGEYISFANCGLPY-YIGGVITER 91 (588)
T ss_dssp --------------------CCCCEEEEECCSHHHHHHHHHHHHHCS-SSEEEEECSSSCSSBCGGGHHH-HHTTSSCCG
T ss_pred cccchhcCccc-cCcccCCcccCCCEEEECCcHHHHHHHHHHHhhCc-CCCEEEEECCCCccccCCCCch-hhcCcCCCh
Confidence 34677644442 22222334567899999999999999999999953 4589999999998887665543 222111111
Q ss_pred CCCCCCccccCCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeC---CCe--EEEeccEEeccCCCCCcCCCCCCC
Q 012165 109 ARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITN---SGK--LLKYGSLIVATGCTASRFPEKIGG 183 (469)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~---~g~--~~~yd~lVlAtG~~~~~~~~~~g~ 183 (469)
..+ .......+.++.+++++++++|+.++.+.+.+.+. +|. ++.||+||||||++|. .|.++|.
T Consensus 92 ~~~----------~~~~~~~~~~~~gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~-~p~i~G~ 160 (588)
T 3ics_A 92 QKL----------LVQTVERMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPI-VPSIPGI 160 (588)
T ss_dssp GGG----------BSSCHHHHHHHTTCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC-CCCCTTT
T ss_pred HHh----------hccCHHHHHHhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCC-CCCCCCc
Confidence 110 01233445568899999999999999999888774 455 6899999999999987 5667786
Q ss_pred -CcCcEEEecCHHHHHHHHHhh--hcCCeEEEEcCChHHHHHHHHHHhCCCeEe------------------eeHHHHHH
Q 012165 184 -YLPGVHYIRDVADADALISSL--EKAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------------RYEQLYQQ 242 (469)
Q Consensus 184 -~~~~v~~~~~~~~~~~~~~~~--~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------------~~~~~l~~ 242 (469)
+.+++++.++..+...+...+ ..+++++|||+|++|+|+|..|.++|.+|+ .+.+.+++
T Consensus 161 ~~~~~v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~ 240 (588)
T 3ics_A 161 EEAKALFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPPIDYEMAAYVHEHMKN 240 (588)
T ss_dssp TTCTTEEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHH
T ss_pred ccCCCeEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccccCCHHHHHHHHHHHHH
Confidence 678899999988887776654 368999999999999999999999999987 45677889
Q ss_pred cCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCchhhhcCCccc-CCCEEeCCCCCCCCCceEEe
Q 012165 243 NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAI 321 (469)
Q Consensus 243 ~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~Vd~~~~t~~~~Vfa~ 321 (469)
.||++++++.|++++.. ++ .|.+.+|+++++|.||+|+|++|++++++.+|++.+ +|+|.||+++||+.|+|||+
T Consensus 241 ~GV~i~~~~~v~~i~~~-~~---~v~~~~g~~i~~D~Vi~a~G~~p~~~~l~~~g~~~~~~g~i~vd~~~~t~~~~IyA~ 316 (588)
T 3ics_A 241 HDVELVFEDGVDALEEN-GA---VVRLKSGSVIQTDMLILAIGVQPESSLAKGAGLALGVRGTIKVNEKFQTSDPHIYAI 316 (588)
T ss_dssp TTCEEECSCCEEEEEGG-GT---EEEETTSCEEECSEEEECSCEEECCHHHHHTTCCBCGGGCBCCCTTSBCSSTTEEEC
T ss_pred cCCEEEECCeEEEEecC-CC---EEEECCCCEEEcCEEEEccCCCCChHHHHhcCceEcCCCCEEECCccccCCCCEEEe
Confidence 99999999999999853 22 477889999999999999999999999999999875 68899999999999999999
Q ss_pred ccccccCCccCCcccccchHHHHHHHHHHHHHHHhcCCCCCC-CCCCceeeecccccCCCcceeeEEeecCCCc------
Q 012165 322 GDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTY-DYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE------ 394 (469)
Q Consensus 322 GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~~~~-~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~~------ 394 (469)
|||+..+....|.......+..|..||+.+|++|++.....+ ..+|..+...|+.+ +..+|.++.+
T Consensus 317 GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~-------~a~vGlte~~a~~~g~ 389 (588)
T 3ics_A 317 GDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHGHTDSLYKGTLGTSVAKVFDLT-------VATTGLNEKILKRLNI 389 (588)
T ss_dssp GGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCSSCCCCBCCCEEEEETTEE-------EEEEECCHHHHHHTTC
T ss_pred eeeeecccccCCcccccccHHHHHHHHHHHHHHhcCCCccccCCcccceEEEECCeE-------EEEecCCHHHHHHcCC
Confidence 999987655445444455777899999999999997223334 34555544444432 5556654311
Q ss_pred ---EEE---Ecc--C----CCcEEEEEEe--CCEEEEEEeecCC-hHH-hHHHHHHHhCCCCCC
Q 012165 395 ---TIE---IGN--F----DPKIATFWID--SGKLKGVLVESGS-PEE-FQLLPTLARSQPFVD 442 (469)
Q Consensus 395 ---~~~---~~~--~----~~~~~~~~~~--~~~l~g~~~~~~~-~~~-~~~~~~~~~~~~~~~ 442 (469)
... ... . ...+.|+.++ +++|+|+++++.+ +.+ +..+..+|+.+.+++
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~k~i~~~~~~~ilG~~~~g~~~~~e~i~~~~~ai~~~~t~~ 453 (588)
T 3ics_A 390 PYEVVHVQANSHAGYYPNATPVLIKLIFNKDSGKIYGAQTLGRDGVDKRMDVIATAIKANLTVL 453 (588)
T ss_dssp CCEEEEEEEESSCTTSTTCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBTT
T ss_pred CeEEEEEecCCccccCCCCceEEEEEEEECCCCeEEEEEEEcCCcHHHHHHHHHHHHHcCCCHH
Confidence 111 111 0 1236777774 6999999986654 554 555566678887776
No 20
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=2.6e-40 Score=341.33 Aligned_cols=386 Identities=21% Similarity=0.289 Sum_probs=270.0
Q ss_pred CCCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC----CCCCcccccC-----------C----CCCC
Q 012165 47 FANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE----RPALTKGYLF-----------P----LDKK 107 (469)
Q Consensus 47 ~~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~----~~~l~~~~~~-----------~----~~~~ 107 (469)
.++.++||+|||||+||+++|.+|++.|+ +|+|||+++..+.. .+..++.++. . ....
T Consensus 39 ~~~~~~dVvIIGgG~aGl~aA~~l~~~G~---~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~ 115 (523)
T 1mo9_A 39 NDPREYDAIFIGGGAAGRFGSAYLRAMGG---RQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDM 115 (523)
T ss_dssp TCCSCBSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCC
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHHCCC---CEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHH
Confidence 34556899999999999999999999987 79999998743211 0000010000 0 0000
Q ss_pred CCCCCCCccccCCCCCCCCH---hHH-----HHCCcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCCcCCC
Q 012165 108 PARLPGFHTCVGSGGERQTP---EWY-----KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPE 179 (469)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~---~~~-----~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~~~~~ 179 (469)
...++...... ........ +++ ++.++++++..++..++. ++|.+. ++.+.||+||+|||++|. .|.
T Consensus 116 ~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~--~~v~~~-g~~~~~d~lViATGs~p~-~p~ 190 (523)
T 1mo9_A 116 TEKVVGIKEVV-DLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN--HTVEAA-GKVFKAKNLILAVGAGPG-TLD 190 (523)
T ss_dssp TTCCCCHHHHH-HHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET--TEEEET-TEEEEBSCEEECCCEECC-CCC
T ss_pred HhhhhhHHHHH-HHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC--CEEEEC-CEEEEeCEEEECCCCCCC-CCC
Confidence 00000000000 00000022 455 778999984568888885 567776 778999999999999987 566
Q ss_pred CCCCCcCcEEEecCHHHHHHHH-HhhhcC-CeEEEEcCChHHHHHHHHHHhCCCeEe------------------eeHHH
Q 012165 180 KIGGYLPGVHYIRDVADADALI-SSLEKA-KKVVVVGGGYIGMEVAAAAVGWKLDTT------------------RYEQL 239 (469)
Q Consensus 180 ~~g~~~~~v~~~~~~~~~~~~~-~~~~~~-~~vvVvG~G~~g~e~A~~l~~~g~~v~------------------~~~~~ 239 (469)
++|.+.+++++. +.+. .....+ ++++|||+|++|+|+|..+.++|.+++ .+.+.
T Consensus 191 i~G~~~~~v~~~------~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~ 264 (523)
T 1mo9_A 191 VPGVNAKGVFDH------ATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLIKDNETRAYVLDR 264 (523)
T ss_dssp STTTTSBTEEEH------HHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTCCSHHHHHHHHHH
T ss_pred CCCcccCcEeeH------HHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccccccHHHHHHHHHH
Confidence 777655566543 2222 222234 999999999999999999999999987 44677
Q ss_pred HHHcCcEEEcCCeEEEEEeCCCCcE--EEEEcCCCC-EEeCCEEEEccCCccCCc-hhhhcCCccc-CCCEEeCCCCCCC
Q 012165 240 YQQNGVKFVKGASIKNLEAGSDGRV--AAVKLEDGS-TIDADTIVIGIGAKPTVS-PFERVGLNSS-VGGIQVDGQFRTR 314 (469)
Q Consensus 240 l~~~gV~~~~~~~v~~i~~~~~~~v--~~v~~~~g~-~i~~D~vi~a~G~~p~~~-~~~~~gl~~~-~g~i~Vd~~~~t~ 314 (469)
+++.||++++++.|++++..+++.+ ..|.+++|+ ++++|.||+|+|++|+++ +++++|++.+ +|+|.||+++||+
T Consensus 265 l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~~~l~~~gl~~~~~G~i~Vd~~~~t~ 344 (523)
T 1mo9_A 265 MKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAELAKILGLDLGPKGEVLVNEYLQTS 344 (523)
T ss_dssp HHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCHHHHHHHTCCBCTTSCBCCCTTSBCS
T ss_pred HHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCccCHHHcCCccCCCCCEEECCCCccC
Confidence 8899999999999999986545543 357888887 899999999999999998 7999999875 6779999999999
Q ss_pred CCceEEeccccccCCccCCcccccchHHHHHHHHHHHHHHHhcCCCC-CCCCCCceeeecccccCCCcceeeEEeecCCC
Q 012165 315 MPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTH-TYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG 393 (469)
Q Consensus 315 ~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~~-~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~ 393 (469)
.|+|||+|||+..+. .+..|..||+.+|.||++.... .+..+|+++..... +..+|....
T Consensus 345 ~~~IyA~GD~~~~~~----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~---------~a~vG~~e~ 405 (523)
T 1mo9_A 345 VPNVYAVGDLIGGPM----------EMFKARKSGCYAARNVMGEKISYTPKNYPDFLHTHYE---------VSFLGMGEE 405 (523)
T ss_dssp STTEEECGGGGCSSC----------SHHHHHHHHHHHHHHHTTCCCCCCCCSCCEEEESSSE---------EEEEECCHH
T ss_pred CCCEEEEeecCCCcc----------cHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEECCCc---------eEEEeCCHH
Confidence 999999999997542 3445999999999999974322 25667875432111 445554321
Q ss_pred -------cEEEE----c------------------------cCCCcEEEEEEe--CCEEEEEEeecCChHH-hHHHHHHH
Q 012165 394 -------ETIEI----G------------------------NFDPKIATFWID--SGKLKGVLVESGSPEE-FQLLPTLA 435 (469)
Q Consensus 394 -------~~~~~----~------------------------~~~~~~~~~~~~--~~~l~g~~~~~~~~~~-~~~~~~~~ 435 (469)
++... . .....|.|++++ +++|+|+++++..+.+ +..+..+|
T Consensus 406 ~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai 485 (523)
T 1mo9_A 406 EARAAGHEIVTIKMPPDTENGLNVALPASDRTMLYAFGKGTAHMSGFQKIVIDAKTRKVLGAHHVGYGAKDAFQYLNVLI 485 (523)
T ss_dssp HHHHTTCCEEEEEESCCSTTTTCSSCSCCTTTHHHHHSTTTGGGGCEEEEEEETTTCBEEEEEEEESSCHHHHHHHHHHH
T ss_pred HHHhCCCCEEEEEEecccccccccccccccccccceEEeecCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHH
Confidence 11110 0 011237788775 6999999987776655 55567778
Q ss_pred hCCCCCCh--hh--hcCCCcHHHHHHHHHhcCCc
Q 012165 436 RSQPFVDK--AK--LQQASSVEEALEIARAALPV 465 (469)
Q Consensus 436 ~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~ 465 (469)
+.+.+++. .. +..||++.|+++.+.+.+.+
T Consensus 486 ~~~~t~~~l~~~~~~~~~Pt~~e~~~~~~~~~~~ 519 (523)
T 1mo9_A 486 KQGLTVDELGDMDELFLNPTHFIQLSRLRAGSKN 519 (523)
T ss_dssp HTTCBHHHHHTSCCCSSCSCCHHHHHHHHTTCSS
T ss_pred HCCCCHHHHHhCCcceECCCHHHHHHHHHHhhHh
Confidence 88888762 22 57789999999999887654
No 21
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=1.5e-41 Score=346.59 Aligned_cols=383 Identities=17% Similarity=0.231 Sum_probs=261.8
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC---CCC-cccccC---------------C--C-CCCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER---PAL-TKGYLF---------------P--L-DKKP 108 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~---~~l-~~~~~~---------------~--~-~~~~ 108 (469)
++||+|||||+||++||.+|++.|+ +|+|||+++.++..- ... ++.++. . . ....
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~---~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 78 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGM---KTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVT 78 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC---eEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCc
Confidence 4799999999999999999999987 799999986542110 000 000000 0 0 0000
Q ss_pred CCCCCCcccc---CCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCC--eEEEeccEEeccCCCCCcCCCCCCC
Q 012165 109 ARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEKIGG 183 (469)
Q Consensus 109 ~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g--~~~~yd~lVlAtG~~~~~~~~~~g~ 183 (469)
.++..+.... .........+++++.+++++.++ +..++....+|.+.+| .++.||+||+|||++|.. |+++|.
T Consensus 79 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~-~~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~-p~~~g~ 156 (468)
T 2qae_A 79 MDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGE-GSFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTE-LPFLPF 156 (468)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEE-EEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECC-BTTBCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEeeCCEEEEEecCCceEEEEcCEEEECCCCCcCC-CCCCCC
Confidence 0000000000 00000001345667899999875 4558876667777777 689999999999999874 445564
Q ss_pred CcCcEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe------------------eeHHHH-HHcC
Q 012165 184 YLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------------RYEQLY-QQNG 244 (469)
Q Consensus 184 ~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------------~~~~~l-~~~g 244 (469)
+.+++++ ..+ +......+++++|||+|++|+|+|..|.++|.+|+ .+.+.+ ++.|
T Consensus 157 ~~~~v~t---~~~---~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~~g 230 (468)
T 2qae_A 157 DEKVVLS---STG---ALALPRVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPTLDEDVTNALVGALAKNEK 230 (468)
T ss_dssp CSSSEEC---HHH---HHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTC
T ss_pred CcCceec---hHH---HhhcccCCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccccCCHHHHHHHHHHHhhcCC
Confidence 4444433 233 22223457999999999999999999999999987 345678 8999
Q ss_pred cEEEcCCeEEEEEeCCCCcEEEEEcC--CC--CEEeCCEEEEccCCccCCch--hhhcCCccc-CCCEEeCCCCCCCCCc
Q 012165 245 VKFVKGASIKNLEAGSDGRVAAVKLE--DG--STIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPG 317 (469)
Q Consensus 245 V~~~~~~~v~~i~~~~~~~v~~v~~~--~g--~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~Vd~~~~t~~~~ 317 (469)
|++++++++++++.++++ + .+.++ +| +++++|.||+|+|++||+++ ++++|++.+ +|+|.||+++||+.|+
T Consensus 231 v~i~~~~~v~~i~~~~~~-~-~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~ 308 (468)
T 2qae_A 231 MKFMTSTKVVGGTNNGDS-V-SLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFETSIPD 308 (468)
T ss_dssp CEEECSCEEEEEEECSSS-E-EEEEECC---EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCCTTSBCSSTT
T ss_pred cEEEeCCEEEEEEEcCCe-E-EEEEEcCCCceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeECCCcccCCCC
Confidence 999999999999865333 3 45554 66 67999999999999999988 788898876 5779999999999999
Q ss_pred eEEeccccc-cCCccCCcccccchHHHHHHHHHHHHHHHhcCCCCC--CCCCCceeeecccccCCCcceeeEEeecCCC-
Q 012165 318 IFAIGDVAA-FPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHT--YDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG- 393 (469)
Q Consensus 318 Vfa~GD~a~-~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~~~--~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~- 393 (469)
|||+|||+. .+. .+..|..||+.+|.+|++.. .+ +..+|+ ...++.+ +..+|....
T Consensus 309 IyA~GD~~~~~~~----------~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~--~~~~~~~-------~a~vG~~e~~ 368 (468)
T 2qae_A 309 VYAIGDVVDKGPM----------LAHKAEDEGVACAEILAGKP-GHVNYGVIPA--VIYTMPE-------VASVGKSEDE 368 (468)
T ss_dssp EEECGGGBSSSCS----------CHHHHHHHHHHHHHHHTTCC-CCCCTTSCCE--EECSSSE-------EEEEECCHHH
T ss_pred EEEeeccCCCCCc----------cHhHHHHHHHHHHHHHcCCC-ccCCCCCCCE--EEECCCc-------eEEEeCCHHH
Confidence 999999998 432 34569999999999999743 33 444564 2222221 555665421
Q ss_pred ------cEEEEc------------cCCCcEEEEEEe--CCEEEEEEeecCChHH-hHHHHHHHhCCCCCCh--hhhcCCC
Q 012165 394 ------ETIEIG------------NFDPKIATFWID--SGKLKGVLVESGSPEE-FQLLPTLARSQPFVDK--AKLQQAS 450 (469)
Q Consensus 394 ------~~~~~~------------~~~~~~~~~~~~--~~~l~g~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~ 450 (469)
+..... .....|.|++++ +++|+|+++++..+.+ +..+..+|+.+.+++. ..+..||
T Consensus 369 a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~P 448 (468)
T 2qae_A 369 LKKEGVAYKVGKFPFNANSRAKAVSTEDGFVKVLVDKATDRILGVHIVCTTAGELIGEACLAMEYGASSEDVGRTCHAHP 448 (468)
T ss_dssp HHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSS
T ss_pred HHhcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCC
Confidence 111110 112358888886 6999999987777655 5556667888887763 2347789
Q ss_pred cHHHHHHHHHhcCCcc
Q 012165 451 SVEEALEIARAALPVE 466 (469)
Q Consensus 451 ~~~~~~~~~~~~~~~~ 466 (469)
++.|+++.|++++..+
T Consensus 449 t~~e~~~~~~~~~~~~ 464 (468)
T 2qae_A 449 TMSEALKEACMALFAK 464 (468)
T ss_dssp CTHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHHhcc
Confidence 9999999998765543
No 22
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=8.2e-41 Score=343.57 Aligned_cols=382 Identities=18% Similarity=0.206 Sum_probs=265.7
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHc---CCCCCcEEEEcCCCCCCCC---CCCC-ccccc---------CC--CCCC-----
Q 012165 51 NREFVIVGGGNAAGYAARTFVEH---GMADGRLCIVSKEAYAPYE---RPAL-TKGYL---------FP--LDKK----- 107 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~---g~~~~~V~vie~~~~~~~~---~~~l-~~~~~---------~~--~~~~----- 107 (469)
++||+|||||+||+++|.+|++. |. +|+|||+++ .+.. .... ++.++ .. ....
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~---~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~ 77 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETT---QVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFD 77 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTE---EEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC----
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcC---EEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccC
Confidence 47999999999999999999999 76 899999986 2110 0000 00000 00 0000
Q ss_pred --CCCCCCCcccc---CCCCCCCCHhHHHHCCcEEEeCCcEEEEeC------CCcEEEeCCCe--EEEeccEEeccCCCC
Q 012165 108 --PARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDI------EKQTLITNSGK--LLKYGSLIVATGCTA 174 (469)
Q Consensus 108 --~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~v~~id~------~~~~v~~~~g~--~~~yd~lVlAtG~~~ 174 (469)
..++..+.... .........+++++.+++++.+ ++..+++ ....|.+.+|+ .+.||+||+|||++|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p 156 (499)
T 1xdi_A 78 DAKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAG-RGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASP 156 (499)
T ss_dssp --CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-EEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCC
Confidence 00000000000 0000001245567789999997 5777887 23355566676 799999999999998
Q ss_pred CcCCCCCCCCcCcEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe------------------ee
Q 012165 175 SRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------------RY 236 (469)
Q Consensus 175 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------------~~ 236 (469)
. .|+++|.+..++++..+.. .....+++++|||+|++|+|+|..+.++|.+|+ .+
T Consensus 157 ~-~p~i~g~~~~~v~~~~~~~------~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l 229 (499)
T 1xdi_A 157 R-ILPSAQPDGERILTWRQLY------DLDALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPYEDADAALVL 229 (499)
T ss_dssp C-CCGGGCCCSSSEEEGGGGG------GCSSCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCCSSHHHHHHH
T ss_pred C-CCCCCCCCcCcEEehhHhh------hhhccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHH
Confidence 7 4556675555565543222 222357899999999999999999999999887 44
Q ss_pred HHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCch--hhhcCCccc-CCCEEeCCCCCC
Q 012165 237 EQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRT 313 (469)
Q Consensus 237 ~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~Vd~~~~t 313 (469)
.+.+++.||++++++.|++++.++ +.+ .+.+.+|+++++|.||+|+|++|++++ ++++|++.+ +|+|.||+++||
T Consensus 230 ~~~l~~~GV~i~~~~~V~~i~~~~-~~v-~v~~~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~~~t 307 (499)
T 1xdi_A 230 EESFAERGVRLFKNARAASVTRTG-AGV-LVTMTDGRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRVSRT 307 (499)
T ss_dssp HHHHHHTTCEEETTCCEEEEEECS-SSE-EEEETTSCEEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCCSSSBC
T ss_pred HHHHHHCCCEEEeCCEEEEEEEeC-CEE-EEEECCCcEEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEECCCccc
Confidence 677889999999999999998643 334 577888989999999999999999988 788898876 477999999999
Q ss_pred CCCceEEeccccccCCccCCcccccchHHHHHHHHHHHHHHHhcCCCC--CCCCCCceeeecccccCCCcceeeEEeecC
Q 012165 314 RMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRKVWWQFFGDN 391 (469)
Q Consensus 314 ~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~~--~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~ 391 (469)
+.|+|||+|||+..+. .+..|..+|+.+|++|++.... .|..+|+++ .++. .+..+|..
T Consensus 308 ~~~~IyA~GD~~~~~~----------l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~--~~~~-------~~a~vG~~ 368 (499)
T 1xdi_A 308 LATGIYAAGDCTGLLP----------LASVAAMQGRIAMYHALGEGVSPIRLRTVAATV--FTRP-------EIAAVGVP 368 (499)
T ss_dssp SSTTEEECSGGGTSCS----------CHHHHHHHHHHHHHHHTTCCCCCCCGGGCEEEE--CSSS-------EEEEEESC
T ss_pred CCCCEEEEeccCCCcc----------cHHHHHHHHHHHHHHhcCCCCccCCCCCCcEEE--EecC-------CceEeCCC
Confidence 9999999999998542 3446999999999999975222 345566543 2221 15667754
Q ss_pred CC-------cEEE-E-----------ccCCCcEEEEEEe--CCEEEEEEeecCChHH-hHHHHHHHhCCCCCCh--hhhc
Q 012165 392 VG-------ETIE-I-----------GNFDPKIATFWID--SGKLKGVLVESGSPEE-FQLLPTLARSQPFVDK--AKLQ 447 (469)
Q Consensus 392 ~~-------~~~~-~-----------~~~~~~~~~~~~~--~~~l~g~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~ 447 (469)
.. +... . ......|.|++++ +|+|+|+++++..+.+ +..+..+|+.+.+++. ..+.
T Consensus 369 e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~ 448 (499)
T 1xdi_A 369 QSVIDAGSVAARTIMLPLRTNARAKMSEMRHGFVKIFCRRSTGVVIGGVVVAPIASELILPIAVAVQNRITVNELAQTLA 448 (499)
T ss_dssp HHHHHHTSSCEEEEEEESTTSHHHHHTTCSSCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSBC
T ss_pred HHHHHhCCCCEEEEEEecCcccceeecCCCceEEEEEEECCCCEEEEEEEECCchHHHHHHHHHHHHCCCCHHHHhcccc
Confidence 32 1111 0 0112347888887 5999999987777655 4556667888887763 2356
Q ss_pred CCCcHHHHHHHHHhcCCc
Q 012165 448 QASSVEEALEIARAALPV 465 (469)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~ 465 (469)
.+|++.|+++.|+.++..
T Consensus 449 ~~Pt~~e~~~~~~~~~~~ 466 (499)
T 1xdi_A 449 VYPSLSGSITEAARRLMA 466 (499)
T ss_dssp CSSSTHHHHHHHHHHHCC
T ss_pred cCCCchHHHHHHHHHHhc
Confidence 789999999999876554
No 23
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=1.1e-39 Score=332.56 Aligned_cols=380 Identities=17% Similarity=0.204 Sum_probs=262.5
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC---------------------CCCCcccc-cCCCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE---------------------RPALTKGY-LFPLDKK 107 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~---------------------~~~l~~~~-~~~~~~~ 107 (469)
.++||+|||||+||+++|.+|++.|+ +|+|||++.. +.. .+..+. + -......
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~---~V~lie~~~~-GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~-~~g~~~~~~ 77 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGA---QVTLIERGTI-GGTCVNVGCVPSKIMIRAAHIAHLRRESPF-DGGIAATVP 77 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSST-THHHHHHSHHHHHHHHHHHHHHHHHHCCTT-TTTSCCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC---EEEEEeCCCC-CccccCCCccchHHHHHHHHHHHHHhhhhh-cCCccCCCC
Confidence 46899999999999999999999987 8999998832 100 000000 0 0000000
Q ss_pred CCCCCCCccccC---CCCC-CCCHhHHHHC-CcEEEeCCcEEEEeCCCcEEEeCCC--eEEEeccEEeccCCCCCcCCCC
Q 012165 108 PARLPGFHTCVG---SGGE-RQTPEWYKEK-GIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEK 180 (469)
Q Consensus 108 ~~~~~~~~~~~~---~~~~-~~~~~~~~~~-~i~~~~~~~v~~id~~~~~v~~~~g--~~~~yd~lVlAtG~~~~~~~~~ 180 (469)
..++..+..... .... ....+++++. +++++.+ ++..++....+|.+.+| ++++||+||||||++|+ .|++
T Consensus 78 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~-~p~i 155 (467)
T 1zk7_A 78 TIDRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHG-EARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPA-VPPI 155 (467)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEE-EEEEEETTEEEEEETTSSEEEEECSEEEECCCEEEC-CCCC
T ss_pred ccCHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEE-EEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCCCC-CCCC
Confidence 000000000000 0000 0123455666 9999986 68888887777888888 67999999999999987 4656
Q ss_pred CCCCcCcEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe-----------------eeHHHHHHc
Q 012165 181 IGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT-----------------RYEQLYQQN 243 (469)
Q Consensus 181 ~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~-----------------~~~~~l~~~ 243 (469)
+|.+..+++ + .+.+.+....+++++|||+|++|+|+|..|.++|.+|+ .+.+.+++.
T Consensus 156 ~G~~~~~~~---~---~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~l~~~l~~~ 229 (467)
T 1zk7_A 156 PGLKESPYW---T---STEALASDTIPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFREDPAIGEAVTAAFRAE 229 (467)
T ss_dssp TTTTTSCCB---C---HHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTSCHHHHHHHHHHHHHT
T ss_pred CCCCcCcee---c---HHHHhcccccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCCCCHHHHHHHHHHHHhC
Confidence 664333322 2 33333334468999999999999999999999999987 345678889
Q ss_pred CcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCch--hhhcCCccc-CCCEEeCCCCCCCCCceEE
Q 012165 244 GVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFA 320 (469)
Q Consensus 244 gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~Vd~~~~t~~~~Vfa 320 (469)
||++++++.|++++.+ ++ ...+.++ +.++++|.||+|+|.+|++++ ++.++++.+ +|+|.||+++||+.|+|||
T Consensus 230 Gv~i~~~~~v~~i~~~-~~-~~~v~~~-~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~iya 306 (467)
T 1zk7_A 230 GIEVLEHTQASQVAHM-DG-EFVLTTT-HGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRTSNPNIYA 306 (467)
T ss_dssp TCEEETTCCEEEEEEE-TT-EEEEEET-TEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBCSSTTEEE
T ss_pred CCEEEcCCEEEEEEEe-CC-EEEEEEC-CcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECCCcccCCCCEEE
Confidence 9999999999999853 33 3356665 458999999999999999875 578888876 5679999999999999999
Q ss_pred eccccccCCccCCcccccchHHHHHHHHHHHHHHHhcCCC-CCCCCCCceeeecccccCCCcceeeEEeecCCC------
Q 012165 321 IGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG------ 393 (469)
Q Consensus 321 ~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~-~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~------ 393 (469)
+|||+..+. .+..|..+|+.+|.||++... ..+..+|++ ..+.. .+..+|....
T Consensus 307 ~GD~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~--~~~~~-------~~a~vG~~~~~a~~~g 367 (467)
T 1zk7_A 307 AGDCTDQPQ----------FVYVAAAAGTRAAINMTGGDAALDLTAMPAV--VFTDP-------QVATVGYSEAEAHHDG 367 (467)
T ss_dssp CSTTBSSCC----------CHHHHHHHHHHHHHHHTTCCCCCCCTTCEEE--ECSSS-------EEEEEECCHHHHHHTT
T ss_pred EeccCCCcc----------cHHHHHHHHHHHHHHHcCCCcccCCCCCCEE--EecCC-------ceEEEecCHHHHHhcC
Confidence 999998653 355699999999999987532 234455643 22221 1555665422
Q ss_pred -cEEEE------------ccCCCcEEEEEEe--CCEEEEEEeecCChHH-hHHHHHHHhCCCCCCh--hhhcCCCcHHHH
Q 012165 394 -ETIEI------------GNFDPKIATFWID--SGKLKGVLVESGSPEE-FQLLPTLARSQPFVDK--AKLQQASSVEEA 455 (469)
Q Consensus 394 -~~~~~------------~~~~~~~~~~~~~--~~~l~g~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 455 (469)
+.... ......|.+++++ +++|+|+++++.++.+ +..+..+|+.+.+++. .....+||+.|+
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~ 447 (467)
T 1zk7_A 368 IETDSRTLTLDNVPRALANFDTRGFIKLVIEEGSHRLIGVQAVAPEAGELIQTAALAIRNRMTVQELADQLFPYLTMVEG 447 (467)
T ss_dssp CCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTSTTHH
T ss_pred CCeEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHHH
Confidence 11111 0112357888886 6999999987776655 4556778888887763 224678999999
Q ss_pred HHHHHhcCC
Q 012165 456 LEIARAALP 464 (469)
Q Consensus 456 ~~~~~~~~~ 464 (469)
++.|+.++.
T Consensus 448 ~~~~~~~~~ 456 (467)
T 1zk7_A 448 LKLAAQTFN 456 (467)
T ss_dssp HHHHHHTTT
T ss_pred HHHHHHHHh
Confidence 999988654
No 24
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=7.3e-40 Score=334.58 Aligned_cols=383 Identities=18% Similarity=0.251 Sum_probs=262.2
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC---CC-cccccC----------------CC--CCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP---AL-TKGYLF----------------PL--DKK 107 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~---~l-~~~~~~----------------~~--~~~ 107 (469)
+++||+|||||+||+++|..|++.|+ +|+|||+++..+.... .. ++.++. .. ...
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~---~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~ 81 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGF---KTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEV 81 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCC---eEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCC
Confidence 45799999999999999999999987 7999999865421100 00 000000 00 000
Q ss_pred CCCCCCCcccc---CCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCC-C-eEEEeccEEeccCCCCCcCCCCCC
Q 012165 108 PARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNS-G-KLLKYGSLIVATGCTASRFPEKIG 182 (469)
Q Consensus 108 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~-g-~~~~yd~lVlAtG~~~~~~~~~~g 182 (469)
..+++.+.... .........+++++.+++++.+ ++..++.....|.+.+ + +++.||+||+|||++|.. |+++|
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g-~~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~-p~i~g 159 (474)
T 1zmd_A 82 RLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNG-YGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTP-FPGIT 159 (474)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-EEEEEETTEEEEECTTSCEEEEEEEEEEECCCEEECC-CTTCC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEecCCEEEEEecCCCcEEEEeCEEEECCCCCCCC-CCCCC
Confidence 00000000000 0000000134567789999997 5556776656677766 4 579999999999999874 55566
Q ss_pred CCcCcEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe-------------------eeHHHHHHc
Q 012165 183 GYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT-------------------RYEQLYQQN 243 (469)
Q Consensus 183 ~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~-------------------~~~~~l~~~ 243 (469)
.+..++++ ..+ +......+++++|||+|++|+|+|..|.++|.+|+ .+.+.+++.
T Consensus 160 ~~~~~v~t---~~~---~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~ 233 (474)
T 1zmd_A 160 IDEDTIVS---STG---ALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQ 233 (474)
T ss_dssp CCSSSEEC---HHH---HTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSSCCHHHHHHHHHHHHHT
T ss_pred CCcCcEEc---HHH---HhhccccCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcccCHHHHHHHHHHHHHC
Confidence 44334432 222 22222357999999999999999999999999987 345678899
Q ss_pred CcEEEcCCeEEEEEeCCCCcEEEEE-----cCCCCEEeCCEEEEccCCccCCch--hhhcCCccc-CCCEEeCCCCCCCC
Q 012165 244 GVKFVKGASIKNLEAGSDGRVAAVK-----LEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRM 315 (469)
Q Consensus 244 gV~~~~~~~v~~i~~~~~~~v~~v~-----~~~g~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~Vd~~~~t~~ 315 (469)
||+++++++|++++.++++.+ .+. ..+++++++|.||+|+|++|++++ ++++|++.+ +|+|.||+++||+.
T Consensus 234 Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~ 312 (474)
T 1zmd_A 234 GFKFKLNTKVTGATKKSDGKI-DVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKI 312 (474)
T ss_dssp TCEEECSEEEEEEEECTTSCE-EEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCCTTCBCSS
T ss_pred CCEEEeCceEEEEEEcCCceE-EEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEECcCCccCC
Confidence 999999999999986544323 344 356678999999999999999987 788888876 57799999999999
Q ss_pred CceEEeccccccCCccCCcccccchHHHHHHHHHHHHHHHhcCCC-CCCCCCCceeeecccccCCCcceeeEEeecCCC-
Q 012165 316 PGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG- 393 (469)
Q Consensus 316 ~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~-~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~- 393 (469)
|+|||+|||+..+. .+..|..||+.+|.||++... ..|..+|++| |..+ .+..+|....
T Consensus 313 ~~IyA~GD~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~---~~~~------~~a~vG~~e~~ 373 (474)
T 1zmd_A 313 PNIYAIGDVVAGPM----------LAHKAEDEGIICVEGMAGGAVHIDYNCVPSVI---YTHP------EVAWVGKSEEQ 373 (474)
T ss_dssp TTEEECGGGSSSCC----------CHHHHHHHHHHHHHHHTTCCCCCCGGGCCEEE---CSSS------EEEEEECCHHH
T ss_pred CCEEEeeecCCCCc----------cHHHHHHHHHHHHHHhcCCCCcCCCCCCCEEE---ECCC------CeEEEeCCHHH
Confidence 99999999997542 345699999999999997432 2345577643 2211 1555665432
Q ss_pred ------cEEEEc------------cCCCcEEEEEEe--CCEEEEEEeecCChHH-hHHHHHHHhCCCCCCh--hhhcCCC
Q 012165 394 ------ETIEIG------------NFDPKIATFWID--SGKLKGVLVESGSPEE-FQLLPTLARSQPFVDK--AKLQQAS 450 (469)
Q Consensus 394 ------~~~~~~------------~~~~~~~~~~~~--~~~l~g~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~ 450 (469)
+..... .....|.|++++ +++|+|+++++..+.+ +..+..+|+.+.+++. ..+..||
T Consensus 374 a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~P 453 (474)
T 1zmd_A 374 LKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHP 453 (474)
T ss_dssp HHHHTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHHSCCCTT
T ss_pred HHhcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCC
Confidence 111100 112358888887 6999999987776644 5566777888887762 3357789
Q ss_pred cHHHHHHHHHhcC
Q 012165 451 SVEEALEIARAAL 463 (469)
Q Consensus 451 ~~~~~~~~~~~~~ 463 (469)
++.|++..|+.++
T Consensus 454 t~~e~~~~~~~~~ 466 (474)
T 1zmd_A 454 TLSEAFREANLAA 466 (474)
T ss_dssp CTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 9999999998754
No 25
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=3.7e-41 Score=343.23 Aligned_cols=382 Identities=20% Similarity=0.230 Sum_probs=257.9
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC---CCCC-ccccc------------CCCCCC----CCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE---RPAL-TKGYL------------FPLDKK----PAR 110 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~---~~~l-~~~~~------------~~~~~~----~~~ 110 (469)
++||+|||||+||+++|..|++.|+ +|+|||++. .+.. .... ++.++ ...... ..+
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~---~V~liE~~~-~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~ 78 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGL---STAIVEPKY-WGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFD 78 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCC---eEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccC
Confidence 4799999999999999999999987 799999973 2100 0000 00000 000000 000
Q ss_pred CCCCcccc---CCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCC--eEEEeccEEeccCCCCCcCCCCCCCCc
Q 012165 111 LPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEKIGGYL 185 (469)
Q Consensus 111 ~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g--~~~~yd~lVlAtG~~~~~~~~~~g~~~ 185 (469)
+..+.... .........+++++.+++++.++.+. ++.+..+|.+.+| +++.||+||+|||++|+. |++++.+.
T Consensus 79 ~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~-id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~-~~~~g~~~ 156 (464)
T 2a8x_A 79 YGIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTF-ADANTLLVDLNDGGTESVTFDNAIIATGSSTRL-VPGTSLSA 156 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEE-SSSSEEEEEETTSCCEEEEEEEEEECCCEEECC-CTTCCCBT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-ecCCeEEEEeCCCceEEEEcCEEEECCCCCCCC-CCCCCCCc
Confidence 00000000 00000001345667899999875443 5554456667777 689999999999999864 44455322
Q ss_pred CcEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe------------------eeHHHHHHcCcEE
Q 012165 186 PGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------------RYEQLYQQNGVKF 247 (469)
Q Consensus 186 ~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------------~~~~~l~~~gV~~ 247 (469)
. + .+..+ .......+++++|||+|++|+|+|..|.++|.+|+ .+.+.+++.||++
T Consensus 157 ~-~---~~~~~---~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i 229 (464)
T 2a8x_A 157 N-V---VTYEE---QILSRELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTI 229 (464)
T ss_dssp T-E---ECHHH---HHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEE
T ss_pred e-E---EecHH---HhhccccCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHcCCEE
Confidence 2 2 23333 22223357999999999999999999999999988 3567788999999
Q ss_pred EcCCeEEEEEeCCCCcEEEEEcC-CC--CEEeCCEEEEccCCccCCch--hhhcCCccc-CCCEEeCCCCCCCCCceEEe
Q 012165 248 VKGASIKNLEAGSDGRVAAVKLE-DG--STIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAI 321 (469)
Q Consensus 248 ~~~~~v~~i~~~~~~~v~~v~~~-~g--~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~Vd~~~~t~~~~Vfa~ 321 (469)
++++.+++++.+++ .+ .+.++ +| +++++|.||+|+|++||+++ ++++|+..+ +|+|.||+++||+.|+|||+
T Consensus 230 ~~~~~v~~i~~~~~-~~-~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~ 307 (464)
T 2a8x_A 230 LTATKVESIADGGS-QV-TVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYMRTNVGHIYAI 307 (464)
T ss_dssp ECSCEEEEEEECSS-CE-EEEEESSSCEEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCCTTSBCSSTTEEEC
T ss_pred EeCcEEEEEEEcCC-eE-EEEEEcCCceEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeECcCCccCCCCEEEe
Confidence 99999999986433 33 45554 66 67999999999999999987 788898876 57799999999999999999
Q ss_pred ccccccCCccCCcccccchHHHHHHHHHHHHHHHhcCCCCC---CCCCCceeeecccccCCCcceeeEEeecCCC-----
Q 012165 322 GDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHT---YDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG----- 393 (469)
Q Consensus 322 GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~~~---~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~----- 393 (469)
|||+..+. .+..|..||+.+|+||++....+ |..+|++ ..++.+ +..+|....
T Consensus 308 GD~~~~~~----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~--~~~~~~-------~a~vG~~e~~a~~~ 368 (464)
T 2a8x_A 308 GDVNGLLQ----------LAHVAEAQGVVAAETIAGAETLTLGDHRMLPRA--TFCQPN-------VASFGLTEQQARNE 368 (464)
T ss_dssp GGGGCSSC----------SHHHHHHHHHHHHHHHHTCCCCCCCCGGGSCEE--ECSSSE-------EEEEECCHHHHHHT
T ss_pred ECcCCCcc----------CHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEE--EECCCC-------eEEEcCCHHHHHhc
Confidence 99997542 34569999999999999733333 4556653 222211 455564321
Q ss_pred --cEEEEc------------cCCCcEEEEEEe--CCEEEEEEeecCChHH-hHHHHHHHhCCCCCCh--hhhcCCCcHHH
Q 012165 394 --ETIEIG------------NFDPKIATFWID--SGKLKGVLVESGSPEE-FQLLPTLARSQPFVDK--AKLQQASSVEE 454 (469)
Q Consensus 394 --~~~~~~------------~~~~~~~~~~~~--~~~l~g~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 454 (469)
+..... .....|.|++++ +++|+|+++++..+.+ +..+..+|+.+.+++. ..+..||++.|
T Consensus 369 g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e 448 (464)
T 2a8x_A 369 GYDVVVAKFPFTANAKAHGVGDPSGFVKLVADAKHGELLGGHLVGHDVAELLPELTLAQRWDLTASELARNVHTHPTMSE 448 (464)
T ss_dssp TCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTTEEEEEEEEETTGGGGHHHHHHHHHTTCBHHHHTTSCCCTTCTTH
T ss_pred CCCEEEEEEEcchhhhhhhcCCCcEEEEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhhCccCCCChHH
Confidence 111100 112358888886 6999999987777654 5556667888887762 23477899999
Q ss_pred HHHHHHhcCCcc
Q 012165 455 ALEIARAALPVE 466 (469)
Q Consensus 455 ~~~~~~~~~~~~ 466 (469)
+++.|++++..+
T Consensus 449 ~~~~~~~~~~~~ 460 (464)
T 2a8x_A 449 ALQECFHGLVGH 460 (464)
T ss_dssp HHHHHHHHHHSC
T ss_pred HHHHHHHHHhcc
Confidence 999998765443
No 26
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=4.9e-41 Score=343.06 Aligned_cols=385 Identities=20% Similarity=0.294 Sum_probs=261.5
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC---CC-cccccC---------------CC--CCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP---AL-TKGYLF---------------PL--DKK 107 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~---~l-~~~~~~---------------~~--~~~ 107 (469)
+.++||+|||||+||+++|..|++.|+ +|+|||+++.++.... .. ++.++. .. ...
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~---~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~ 80 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGF---KTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNV 80 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTC---CEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCE
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCC---eEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 346899999999999999999999987 7999999865432100 00 000000 00 000
Q ss_pred CCCCCCCcccc---CCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCC--eEEEeccEEeccCCCCCcCCCCCC
Q 012165 108 PARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEKIG 182 (469)
Q Consensus 108 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g--~~~~yd~lVlAtG~~~~~~~~~~g 182 (469)
..++..+.... .........+++++.+++++.++.+ .++.....|.+.+| .++.||+||+|||++|.. |+++|
T Consensus 81 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~-p~~~g 158 (470)
T 1dxl_A 81 EIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGK-FVSPSEISVDTIEGENTVVKGKHIIIATGSDVKS-LPGVT 158 (470)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEE-EEETTEEEECCSSSCCEEEECSEEEECCCEEECC-BTTBC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEE-EecCCEEEEEeCCCceEEEEcCEEEECCCCCCCC-CCCCC
Confidence 00000000000 0000000123556779999998654 47765556666677 679999999999999874 44556
Q ss_pred CCcCcEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe------------------eeHHHHHHcC
Q 012165 183 GYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------------RYEQLYQQNG 244 (469)
Q Consensus 183 ~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------------~~~~~l~~~g 244 (469)
.+.+++.+ .. .+......+++++|||+|++|+|+|..|.++|.+|+ .+.+.+++.|
T Consensus 159 ~~~~~v~~---~~---~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~g 232 (470)
T 1dxl_A 159 IDEKKIVS---ST---GALALSEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPTMDAEIRKQFQRSLEKQG 232 (470)
T ss_dssp CCSSSEEC---HH---HHTTCSSCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHSS
T ss_pred CCcccEEe---HH---HhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccccccHHHHHHHHHHHHHcC
Confidence 44344432 22 222222357999999999999999999999999987 3567788999
Q ss_pred cEEEcCCeEEEEEeCCCCcEEEEEcC---CC--CEEeCCEEEEccCCccCCch--hhhcCCccc-CCCEEeCCCCCCCCC
Q 012165 245 VKFVKGASIKNLEAGSDGRVAAVKLE---DG--STIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMP 316 (469)
Q Consensus 245 V~~~~~~~v~~i~~~~~~~v~~v~~~---~g--~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~Vd~~~~t~~~ 316 (469)
|++++++.+.+++.++++ + .+.++ +| +++++|.||+|+|++||+++ ++++|++.+ +|+|.||+++||+.|
T Consensus 233 v~i~~~~~v~~i~~~~~~-~-~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~ 310 (470)
T 1dxl_A 233 MKFKLKTKVVGVDTSGDG-V-KLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFSTNVS 310 (470)
T ss_dssp CCEECSEEEEEEECSSSS-E-EEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCCTTCBCSST
T ss_pred CEEEeCCEEEEEEEcCCe-E-EEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECcCCccCCC
Confidence 999999999999854333 3 35543 44 68999999999999999988 788898876 577999999999999
Q ss_pred ceEEeccccccCCccCCcccccchHHHHHHHHHHHHHHHhcCCCCC--CCCCCceeeecccccCCCcceeeEEeecCCC-
Q 012165 317 GIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHT--YDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG- 393 (469)
Q Consensus 317 ~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~~~--~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~- 393 (469)
+|||+|||+..+. .+..|..+|+.+|.+|++. ..+ |..+|+ ...++.+ +..+|....
T Consensus 311 ~Iya~GD~~~~~~----------~~~~A~~~g~~aa~~i~g~-~~~~~~~~~p~--~~~~~~~-------~a~vG~~e~~ 370 (470)
T 1dxl_A 311 GVYAIGDVIPGPM----------LAHKAEEDGVACVEYLAGK-VGHVDYDKVPG--VVYTNPE-------VASVGKTEEQ 370 (470)
T ss_dssp TEEECSTTSSSCC----------CHHHHHHHHHHHHHHHTTS-CCCCCTTSCCE--EECSSSE-------EEEEECCHHH
T ss_pred CEEEEeccCCCCc----------cHHHHHHHHHHHHHHHcCC-CcCCCCCCCCE--EEECCCc-------eEEEcCCHHH
Confidence 9999999997542 3456999999999999964 333 444554 3322221 455664321
Q ss_pred ------cEEEEc------------cCCCcEEEEEEe--CCEEEEEEeecCChHH-hHHHHHHHhCCCCCCh--hhhcCCC
Q 012165 394 ------ETIEIG------------NFDPKIATFWID--SGKLKGVLVESGSPEE-FQLLPTLARSQPFVDK--AKLQQAS 450 (469)
Q Consensus 394 ------~~~~~~------------~~~~~~~~~~~~--~~~l~g~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~ 450 (469)
+..... .....|.|++++ +++|+|+++++..+.+ +..+..+|+.+.+++. ..+..||
T Consensus 371 a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~P 450 (470)
T 1dxl_A 371 VKETGVEYRVGKFPFMANSRAKAIDNAEGLVKIIAEKETDKILGVHIMAPNAGELIHEAAIALQYDASSEDIARVCHAHP 450 (470)
T ss_dssp HHHTTCCEEEEEEEGGGCHHHHHHSCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSS
T ss_pred HHhcCCcEEEEEEecccchHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCC
Confidence 111100 112358888886 6999999997777655 5556667888887763 2347789
Q ss_pred cHHHHHHHHHhcCCcc
Q 012165 451 SVEEALEIARAALPVE 466 (469)
Q Consensus 451 ~~~~~~~~~~~~~~~~ 466 (469)
++.|+++.|++++..+
T Consensus 451 t~~e~~~~~~~~~~~~ 466 (470)
T 1dxl_A 451 TMSEAIKEAAMATYDK 466 (470)
T ss_dssp CTTHHHHHHHHHHHSC
T ss_pred ChHHHHHHHHHHHhcC
Confidence 9999999998765543
No 27
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=1.8e-40 Score=339.58 Aligned_cols=382 Identities=17% Similarity=0.229 Sum_probs=255.9
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC---CCCC-ccccc------------C----CCCCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE---RPAL-TKGYL------------F----PLDKKPA 109 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~---~~~l-~~~~~------------~----~~~~~~~ 109 (469)
.++||+|||||+||+++|..|++.|. +|+|||+++..+.. .... ++.++ . .......
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~---~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~ 81 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGL---KVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPEL 81 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCC---eEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCcc
Confidence 35799999999999999999999987 79999997654210 0000 00000 0 0000000
Q ss_pred CCCCCcccc---CCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCC------------eEEEeccEEeccCCCC
Q 012165 110 RLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG------------KLLKYGSLIVATGCTA 174 (469)
Q Consensus 110 ~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g------------~~~~yd~lVlAtG~~~ 174 (469)
++..+.... ..........++++.+++++.++.+. ++.....|.+.+| .++.||+||+|||++|
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p 160 (482)
T 1ojt_A 82 DIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF-LDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRV 160 (482)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE-EETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE-ccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCC
Confidence 000000000 00000001234567899999875443 5543334444455 5799999999999998
Q ss_pred CcCCCCCCCCcCcEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe------------------ee
Q 012165 175 SRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------------RY 236 (469)
Q Consensus 175 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------------~~ 236 (469)
..+|.++. + ..+. +..+ +......+++++|||+|++|+|+|..|.++|.+|+ .+
T Consensus 161 ~~~~~i~~-~-~~v~---~~~~---~~~~~~~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l 232 (482)
T 1ojt_A 161 TKLPFIPE-D-PRII---DSSG---ALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGADRDLVKVW 232 (482)
T ss_dssp CCCSSCCC-C-TTEE---CHHH---HTTCCCCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHH
T ss_pred CCCCCCCc-c-CcEE---cHHH---HhcccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccccCHHHHHHH
Confidence 75442432 1 2332 3233 22223357999999999999999999999999988 44
Q ss_pred HHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCC----CCEEeCCEEEEccCCccCCch--hhhcCCccc-CCCEEeCC
Q 012165 237 EQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED----GSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDG 309 (469)
Q Consensus 237 ~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~----g~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~Vd~ 309 (469)
.+.+++.||++++++.+++++.+++ . ..+.+.+ |+++++|.||+|+|++||+++ ++++|++.+ +|+|.||+
T Consensus 233 ~~~l~~~gV~i~~~~~v~~i~~~~~-~-~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~ 310 (482)
T 1ojt_A 233 QKQNEYRFDNIMVNTKTVAVEPKED-G-VYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDK 310 (482)
T ss_dssp HHHHGGGEEEEECSCEEEEEEEETT-E-EEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCCCCCT
T ss_pred HHHHHhcCCEEEECCEEEEEEEcCC-e-EEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCEeeCC
Confidence 6778899999999999999986432 2 3566766 778999999999999999987 688899876 47799999
Q ss_pred CCCCCCCceEEeccccccCCccCCcccccchHHHHHHHHHHHHHHHhcCCCCC--CCCCCceeeecccccCCCcceeeEE
Q 012165 310 QFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHT--YDYLPYFYSRVFEYEGSPRKVWWQF 387 (469)
Q Consensus 310 ~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~~~--~~~~p~~~~~~~~~~g~~~~~~~~~ 387 (469)
++||+.|+|||+|||+..+. .+..|..||+.+|.||++.. .+ +..+|++ ..+..+ +..
T Consensus 311 ~~~t~~~~IyA~GD~~~~~~----------l~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~--~~~~~~-------~a~ 370 (482)
T 1ojt_A 311 QMRTNVPHIYAIGDIVGQPM----------LAHKAVHEGHVAAENCAGHK-AYFDARVIPGV--AYTSPE-------VAW 370 (482)
T ss_dssp TSBCSSTTEEECGGGTCSSC----------CHHHHHHHHHHHHHHHTTCC-CCCCCCCCCEE--ECSSSC-------EEE
T ss_pred CcccCCCCEEEEEcccCCCc----------cHHHHHHHHHHHHHHHcCCC-ccCCCCCCCEE--EEcCCC-------eEE
Confidence 99999999999999998542 34569999999999999743 33 4445642 222221 455
Q ss_pred eecCCC-------cEEEEc------------cCCCcEEEEEE--eCCEEEEEEeecCChHH-hHHHHHHHhCCCCCCh--
Q 012165 388 FGDNVG-------ETIEIG------------NFDPKIATFWI--DSGKLKGVLVESGSPEE-FQLLPTLARSQPFVDK-- 443 (469)
Q Consensus 388 ~G~~~~-------~~~~~~------------~~~~~~~~~~~--~~~~l~g~~~~~~~~~~-~~~~~~~~~~~~~~~~-- 443 (469)
+|.+.. +..... .....|.|+++ ++++|+|+++++..+.+ +..+..+|+.+.+++.
T Consensus 371 vG~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~ 450 (482)
T 1ojt_A 371 VGETELSAKASARKITKANFPWAASGRAIANGCDKPFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADIG 450 (482)
T ss_dssp EECCHHHHHHHTCCEEEEEEEGGGCHHHHHTTCCSCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHH
T ss_pred EeCCHHHHHhcCCCEEEEEEEcCcchHHhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHh
Confidence 665421 111100 11234888888 46999999987777655 4445667888887763
Q ss_pred hhhcCCCcHHHHHHHHHhcCCc
Q 012165 444 AKLQQASSVEEALEIARAALPV 465 (469)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~ 465 (469)
..+..||++.|++..|+.++..
T Consensus 451 ~~~~~~Pt~~e~~~~a~~~~~~ 472 (482)
T 1ojt_A 451 KTIHPHPTLGESIGMAAEVALG 472 (482)
T ss_dssp TSCCCSSSSTTHHHHHHHHHHT
T ss_pred cCccCCCCHHHHHHHHHHHHhc
Confidence 2357899999999999876543
No 28
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-40 Score=339.94 Aligned_cols=379 Identities=19% Similarity=0.221 Sum_probs=257.1
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC--CCCCCc-ccc---------cCCCCCCCCCC------
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY--ERPALT-KGY---------LFPLDKKPARL------ 111 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~--~~~~l~-~~~---------~~~~~~~~~~~------ 111 (469)
.++||+|||||+||+++|..|++.|. +|+|||++...+- +...++ +.+ +..........
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~---~V~liE~~~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 86 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGA---KTLLVEAKALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDK 86 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSC---CEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSG
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCC---cEEEEeCCCcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccccc
Confidence 45899999999999999999999987 7999999742100 000000 000 00000000000
Q ss_pred --CCC--ccccC------CCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCe--EEEeccEEeccCCCCCcCC-
Q 012165 112 --PGF--HTCVG------SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGK--LLKYGSLIVATGCTASRFP- 178 (469)
Q Consensus 112 --~~~--~~~~~------~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~--~~~yd~lVlAtG~~~~~~~- 178 (469)
+.+ ..... ..........+++.+++++.+ ++..++.....|.+.+|+ ++.||+||||||++|.. |
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~-p~ 164 (479)
T 2hqm_A 87 EHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFG-WARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIF-PE 164 (479)
T ss_dssp GGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEE-EEEECTTSCEEEEESSSCCEEEEEEEEEECCCEEECC-CT
T ss_pred ccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCC-CC
Confidence 000 00000 000000123455789999987 577777766677777776 79999999999999874 4
Q ss_pred CCCCCCcCcEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe------------------eeHHHH
Q 012165 179 EKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------------RYEQLY 240 (469)
Q Consensus 179 ~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------------~~~~~l 240 (469)
.++|. +. ..+ ++.+......+++++|||+|++|+|+|..|.++|.+|+ .+.+.+
T Consensus 165 ~i~g~--~~---~~~---~~~~~~l~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l 236 (479)
T 2hqm_A 165 NIPGF--EL---GTD---SDGFFRLEEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRKFDECIQNTITDHY 236 (479)
T ss_dssp TSTTG--GG---SBC---HHHHHHCSSCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHH
T ss_pred CCCCc--cc---ccc---hHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccccCHHHHHHHHHHH
Confidence 55553 11 122 33333334568999999999999999999999999988 356778
Q ss_pred HHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCC-CEEeCCEEEEccCCccCCch-hhhcCCccc-CCCEEeCCCCCCCCCc
Q 012165 241 QQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG-STIDADTIVIGIGAKPTVSP-FERVGLNSS-VGGIQVDGQFRTRMPG 317 (469)
Q Consensus 241 ~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g-~~i~~D~vi~a~G~~p~~~~-~~~~gl~~~-~g~i~Vd~~~~t~~~~ 317 (469)
++.||+++++++|++++.++++.+..+.+++| +++++|.||+|+|++||+.+ ++.+|++.+ +|+|.||+++||+.|+
T Consensus 237 ~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~ 316 (479)
T 2hqm_A 237 VKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHLGMGSENVGIKLNSHDQIIADEYQNTNVPN 316 (479)
T ss_dssp HHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECCCSSGGGGTCCBCTTSCBCCCTTCBCSSTT
T ss_pred HhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCccccChhhcCceECCCCCEeECCCCccCCCC
Confidence 89999999999999998654453346888899 78999999999999999977 788899876 5789999999999999
Q ss_pred eEEeccccccCCccCCcccccchHHHHHHHHHHHHHHHhcCC---C--CCCCCCCceeeecccccCCCcceeeEEeecCC
Q 012165 318 IFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQ---T--HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNV 392 (469)
Q Consensus 318 Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~---~--~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~ 392 (469)
|||+|||+..+. .+..|..+|+.+|+||++.. . ..|..+|+ ..|..+. +..+|...
T Consensus 317 IyA~GD~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~p~---~~~~~~~------~~~vGl~e 377 (479)
T 2hqm_A 317 IYSLGDVVGKVE----------LTPVAIAAGRKLSNRLFGPEKFRNDKLDYENVPS---VIFSHPE------AGSIGISE 377 (479)
T ss_dssp EEECGGGTTSSC----------CHHHHHHHHHHHHHHHHSCGGGTTCCCCCTTCCE---EECCSSC------EEEEECCH
T ss_pred EEEEEecCCCcc----------cHHHHHHHHHHHHHHhcCCCccCcccCCCCCCCe---EEECCCC------eEEEeCCH
Confidence 999999986432 45679999999999999643 2 23445664 2232211 44455432
Q ss_pred Cc---------EEEE------------ccCCCcEEEEEEe--CCEEEEEEeecCChHHhHHH-HHHHhCCCCCCh--hhh
Q 012165 393 GE---------TIEI------------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVDK--AKL 446 (469)
Q Consensus 393 ~~---------~~~~------------~~~~~~~~~~~~~--~~~l~g~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~ 446 (469)
.+ .... ......|.|++++ +++|+|+++++.++.++... ..+|+.+.+++. ..+
T Consensus 378 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~ 457 (479)
T 2hqm_A 378 KEAIEKYGKENIKVYNSKFTAMYYAMLSEKSPTRYKIVCAGPNEKVVGLHIVGDSSAEILQGFGVAIKMGATKADFDNCV 457 (479)
T ss_dssp HHHHHHHCGGGEEEEEEEECCGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSC
T ss_pred HHHHhcCCCCcEEEEEEeccHHHHHhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCc
Confidence 10 1110 0112347788775 59999999977777665544 456788877662 235
Q ss_pred cCCCcHHHHHHHHH
Q 012165 447 QQASSVEEALEIAR 460 (469)
Q Consensus 447 ~~~~~~~~~~~~~~ 460 (469)
..||++.|+++.|+
T Consensus 458 ~~hPt~~e~~~~~~ 471 (479)
T 2hqm_A 458 AIHPTSAEELVTMR 471 (479)
T ss_dssp CCSSCSGGGGGSCC
T ss_pred CCCCChHHHHHHHH
Confidence 78999999987654
No 29
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.8e-40 Score=335.00 Aligned_cols=378 Identities=21% Similarity=0.277 Sum_probs=256.0
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC---CCCC-cccccC--------------C--CCCCCCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE---RPAL-TKGYLF--------------P--LDKKPAR 110 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~---~~~l-~~~~~~--------------~--~~~~~~~ 110 (469)
++||+|||||+||+++|.+|++.|+ +|+|||++. .+.. .... ++.++. . ......+
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~---~V~lie~~~-~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 78 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQ---KVTIVEKGN-LGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTID 78 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCC---eEEEEECCC-CCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccC
Confidence 4799999999999999999999987 799999973 2100 0000 000000 0 0000000
Q ss_pred CCCCcccc---CCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCC-eEEEeccEEeccCCCCCcCCCCCCCCcC
Q 012165 111 LPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG-KLLKYGSLIVATGCTASRFPEKIGGYLP 186 (469)
Q Consensus 111 ~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g-~~~~yd~lVlAtG~~~~~~~~~~g~~~~ 186 (469)
++.+.... .........+++++.+++++.++. ..++.....|.+.+| +++.||+||+|||++|.. |++++.+..
T Consensus 79 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~-~~id~~~v~V~~~~G~~~i~~d~lViATGs~p~~-~~~~g~~~~ 156 (455)
T 1ebd_A 79 FAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEA-YFVDANTVRVVNGDSAQTYTFKNAIIATGSRPIE-LPNFKFSNR 156 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEE-EEEETTEEEEEETTEEEEEECSEEEECCCEEECC-BTTBCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEE-EEccCCeEEEEeCCCcEEEEeCEEEEecCCCCCC-CCCCCccce
Confidence 00000000 000000013456678999999754 447776667777777 679999999999999874 444553222
Q ss_pred cEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe------------------eeHHHHHHcCcEEE
Q 012165 187 GVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------------RYEQLYQQNGVKFV 248 (469)
Q Consensus 187 ~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------------~~~~~l~~~gV~~~ 248 (469)
+ .+..+ .......+++++|||+|++|+|+|..|+++|.+|+ .+.+.+++.||+++
T Consensus 157 -v---~~~~~---~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~ 229 (455)
T 1ebd_A 157 -I---LDSTG---ALNLGEVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVV 229 (455)
T ss_dssp -E---ECHHH---HHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEE
T ss_pred -E---ecHHH---HhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEE
Confidence 2 23233 22223357999999999999999999999999987 34567889999999
Q ss_pred cCCeEEEEEeCCCCcEEEEEcC---CCCEEeCCEEEEccCCccCCch--hhhcCCccc-CCCEEeCCCCCCCCCceEEec
Q 012165 249 KGASIKNLEAGSDGRVAAVKLE---DGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIG 322 (469)
Q Consensus 249 ~~~~v~~i~~~~~~~v~~v~~~---~g~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~Vd~~~~t~~~~Vfa~G 322 (469)
+++++++++.+++ .+ .+.+. +++++++|.||+|+|++|++++ ++++|++.+ +|+|.||+++||+.|+|||+|
T Consensus 230 ~~~~v~~i~~~~~-~~-~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~G 307 (455)
T 1ebd_A 230 TNALAKGAEERED-GV-TVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSVPNIFAIG 307 (455)
T ss_dssp ESEEEEEEEEETT-EE-EEEEEETTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCCTTCBCSSTTEEECG
T ss_pred eCCEEEEEEEeCC-eE-EEEEEeCCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeCCCcccCCCCEEEEe
Confidence 9999999985433 23 34543 4568999999999999999987 678888876 577999999999999999999
Q ss_pred cccccCCccCCcccccchHHHHHHHHHHHHHHHhcCCCCC--CCCCCceeeecccccCCCcceeeEEeecCCC-------
Q 012165 323 DVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHT--YDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG------- 393 (469)
Q Consensus 323 D~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~~~--~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~------- 393 (469)
||+..+. .+..|..+|+.+|++|++. ..+ |..+|+ ...++.+ +..+|....
T Consensus 308 D~~~~~~----------~~~~A~~~g~~aa~~i~~~-~~~~~~~~~p~--~~~~~~~-------~a~vG~~e~~a~~~g~ 367 (455)
T 1ebd_A 308 DIVPGPA----------LAHKASYEGKVAAEAIAGH-PSAVDYVAIPA--VVFSDPE-------CASVGYFEQQAKDEGI 367 (455)
T ss_dssp GGSSSCC----------CHHHHHHHHHHHHHHHTSC-CCCCCCSCCCE--EECSSSC-------EEEEECCHHHHHTTTC
T ss_pred ccCCCcc----------cHHHHHHHHHHHHHHHcCC-CccCCCCCCCE--EEECCCc-------eEEEeCCHHHHHhcCC
Confidence 9997542 3456999999999999974 333 444564 3322221 445554321
Q ss_pred cEEEEc------------cCCCcEEEEEEe--CCEEEEEEeecCChHH-hHHHHHHHhCCCCCCh--hhhcCCCcHHHHH
Q 012165 394 ETIEIG------------NFDPKIATFWID--SGKLKGVLVESGSPEE-FQLLPTLARSQPFVDK--AKLQQASSVEEAL 456 (469)
Q Consensus 394 ~~~~~~------------~~~~~~~~~~~~--~~~l~g~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 456 (469)
+..... .....|.|++++ +++|+|+++++.++.+ +..+..+|+.+.+++. ..+..||+++|++
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~ 447 (455)
T 1ebd_A 368 DVIAAKFPFAANGRALALNDTDGFLKLVVRKEDGVIIGAQIIGPNASDMIAELGLAIEAGMTAEDIALTIHAHPTLGEIA 447 (455)
T ss_dssp CEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHHTCBHHHHHHSCCCTTSSTHHH
T ss_pred CEEEEEEEcCcchHHhhcCCCcEEEEEEEECCCCEEEEEEEeCCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHH
Confidence 111110 112358888886 6999999987777655 5555667888887762 3357889999999
Q ss_pred HHHHhcC
Q 012165 457 EIARAAL 463 (469)
Q Consensus 457 ~~~~~~~ 463 (469)
+.|++++
T Consensus 448 ~~~~~~~ 454 (455)
T 1ebd_A 448 MEAAEVA 454 (455)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9998754
No 30
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=2.2e-40 Score=338.94 Aligned_cols=385 Identities=19% Similarity=0.271 Sum_probs=258.4
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC---CCC-cccccC------------CCCCC------C
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER---PAL-TKGYLF------------PLDKK------P 108 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~---~~l-~~~~~~------------~~~~~------~ 108 (469)
++||+|||||+||+++|..|++.|+ +|+|||+++.++... ... ++.++. ..... .
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~---~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~ 81 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGF---NTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIK 81 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCC---eEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCc
Confidence 5799999999999999999999987 799999965432100 000 000000 00000 0
Q ss_pred CCCCCCcccc---CCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCC--eE------EEeccEEeccCCCCCcC
Q 012165 109 ARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KL------LKYGSLIVATGCTASRF 177 (469)
Q Consensus 109 ~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g--~~------~~yd~lVlAtG~~~~~~ 177 (469)
.++..+.... .........+++++.+++++.++.+. .+....+|.+.+| ++ +.||+||+|||++|+.+
T Consensus 82 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p~~~ 160 (478)
T 1v59_A 82 INVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSF-EDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVTPF 160 (478)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE-SSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEECCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-ccCCeEEEEecCCCcccccccceEEeCEEEECcCCCCCCC
Confidence 0000000000 00000002235667899999986554 3444445666666 56 99999999999987533
Q ss_pred CCCCCCCcCcEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe------------------eeHHH
Q 012165 178 PEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------------RYEQL 239 (469)
Q Consensus 178 ~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------------~~~~~ 239 (469)
| +...++ ..+.+..+.. .....+++++|||+|++|+|+|..|+++|.+|+ .+.+.
T Consensus 161 ~---g~~~~~-~~v~~~~~~~---~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~ 233 (478)
T 1v59_A 161 P---GIEIDE-EKIVSSTGAL---SLKEIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASMDGEVAKATQKF 233 (478)
T ss_dssp T---TCCCCS-SSEECHHHHT---TCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSSSCHHHHHHHHHH
T ss_pred C---CCCCCC-ceEEcHHHHH---hhhccCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccccCHHHHHHHHHH
Confidence 3 333333 1223333332 222357999999999999999999999999988 45677
Q ss_pred HHHcCcEEEcCCeEEEEEeCCCCcEEEEEcC-----CCCEEeCCEEEEccCCccCCc--hhhhcCCccc-CCCEEeCCCC
Q 012165 240 YQQNGVKFVKGASIKNLEAGSDGRVAAVKLE-----DGSTIDADTIVIGIGAKPTVS--PFERVGLNSS-VGGIQVDGQF 311 (469)
Q Consensus 240 l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~-----~g~~i~~D~vi~a~G~~p~~~--~~~~~gl~~~-~g~i~Vd~~~ 311 (469)
+++.||++++++.+++++..+++....+.++ +++++++|.||+|+|++||++ +++++|++.+ +|+|.||+++
T Consensus 234 l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~ 313 (478)
T 1v59_A 234 LKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVIDDQF 313 (478)
T ss_dssp HHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTCCBCTTSCBCCCTTS
T ss_pred HHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCceeCCCCCEeECcCC
Confidence 8899999999999999985212333356655 456899999999999999998 7889999876 6779999999
Q ss_pred CCCCCceEEeccccccCCccCCcccccchHHHHHHHHHHHHHHHhcCCC-CCCCCCCceeeecccccCCCcceeeEEeec
Q 012165 312 RTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQFFGD 390 (469)
Q Consensus 312 ~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~-~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~ 390 (469)
||+.|+|||+|||+..+. .+..|..||+.+|++|++... ..|..+|++|..... +..+|.
T Consensus 314 ~t~~~~IyA~GD~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~---------~a~vG~ 374 (478)
T 1v59_A 314 NSKFPHIKVVGDVTFGPM----------LAHKAEEEGIAAVEMLKTGHGHVNYNNIPSVMYSHPE---------VAWVGK 374 (478)
T ss_dssp BCSSTTEEECGGGSSSCC----------CHHHHHHHHHHHHHHHHHSCCCCCTTSCCEEECSSSE---------EEEEEC
T ss_pred ccCCCCEEEeeccCCCcc----------cHHHHHHHHHHHHHHHcCCCCCCCCCCCCEEEEcCCc---------EEEEEC
Confidence 999999999999998543 345699999999999997432 346778876654322 444554
Q ss_pred CCC-------cEEEEc------------cCCCcEEEEEEe--CCEEEEEEeecCChHH-hHHHHHHHhCCCCCC-hhh-h
Q 012165 391 NVG-------ETIEIG------------NFDPKIATFWID--SGKLKGVLVESGSPEE-FQLLPTLARSQPFVD-KAK-L 446 (469)
Q Consensus 391 ~~~-------~~~~~~------------~~~~~~~~~~~~--~~~l~g~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~-~ 446 (469)
... +..... .....+.|++++ +++|+|+++++..+.+ +..+..+|+.+.+++ ... .
T Consensus 375 ~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~ 454 (478)
T 1v59_A 375 TEEQLKEAGIDYKIGKFPFAANSRAKTNQDTEGFVKILIDSKTERILGAHIIGPNAGEMIAEAGLALEYGASAEDVARVC 454 (478)
T ss_dssp CHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSC
T ss_pred CHHHHHHcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCC
Confidence 321 111100 012346677665 6999999987776644 666777888888775 333 4
Q ss_pred cCCCcHHHHHHHHHhcCCc
Q 012165 447 QQASSVEEALEIARAALPV 465 (469)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~ 465 (469)
..+|++.|++..|+.++..
T Consensus 455 ~~~Pt~~e~~~~~~~~~~~ 473 (478)
T 1v59_A 455 HAHPTLSEAFKEANMAAYD 473 (478)
T ss_dssp CCTTCTTHHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHHHHhc
Confidence 6789999999999876544
No 31
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=4.7e-40 Score=334.75 Aligned_cols=379 Identities=20% Similarity=0.266 Sum_probs=256.6
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC--CCCCC-cccccC--------------CC-CCCCCCCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY--ERPAL-TKGYLF--------------PL-DKKPARLP 112 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~--~~~~l-~~~~~~--------------~~-~~~~~~~~ 112 (469)
++||+|||||+||+++|..|++.|+ +|+|||+++..+. ....+ ++.++. +. .....++.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~---~V~lie~~~~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 82 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGL---KVLAVEAGEVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLK 82 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC---eEEEEeCCCCCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHH
Confidence 5899999999999999999999987 7999999862100 00000 000000 00 00000000
Q ss_pred CCcccc---CCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCCcCCCCCCCCcCcEE
Q 012165 113 GFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVH 189 (469)
Q Consensus 113 ~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~~~v~ 189 (469)
.+.... ..........++++.+++++.++ +..++. ++|.+. |++++||+||||||++|+.+|.+++. ..++
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~-~~~~~~--~~v~v~-g~~~~~d~lViATGs~p~~p~gi~~~--~~v~ 156 (464)
T 2eq6_A 83 KLGGWRDQVVKKLTGGVGTLLKGNGVELLRGF-ARLVGP--KEVEVG-GERYGAKSLILATGSEPLELKGFPFG--EDVW 156 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-EEEEET--TEEEET-TEEEEEEEEEECCCEEECCBTTBCCS--SSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEeee-EEEccC--CEEEEc-cEEEEeCEEEEcCCCCCCCCCCCCCC--CcEE
Confidence 000000 00000001235667899999975 444653 577776 77899999999999998754434441 1232
Q ss_pred EecCHHHHHHHHHhhh-cCCeEEEEcCChHHHHHHHHHHhCCCeEe------------------eeHHHHHHcCcEEEcC
Q 012165 190 YIRDVADADALISSLE-KAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------------RYEQLYQQNGVKFVKG 250 (469)
Q Consensus 190 ~~~~~~~~~~~~~~~~-~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------------~~~~~l~~~gV~~~~~ 250 (469)
+..+. ..... .+++++|||+|++|+|+|..|+++|.+|+ .+.+.+++.||+++++
T Consensus 157 ---~~~~~---~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~ 230 (464)
T 2eq6_A 157 ---DSTRA---LKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTK 230 (464)
T ss_dssp ---CHHHH---TCGGGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECS
T ss_pred ---cHHHH---HhhhhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccccCHHHHHHHHHHHHhcCCEEEcC
Confidence 32333 22223 57999999999999999999999999988 3467788999999999
Q ss_pred CeEEEEEeCCCCcEEEEEcC-C--CC--EEeCCEEEEccCCccCCch--hhhcCCccc-CCCEEeCCCCCCCCCceEEec
Q 012165 251 ASIKNLEAGSDGRVAAVKLE-D--GS--TIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIG 322 (469)
Q Consensus 251 ~~v~~i~~~~~~~v~~v~~~-~--g~--~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~Vd~~~~t~~~~Vfa~G 322 (469)
+.+++++.++ +.+ .+.+. + |+ ++++|.||+|+|++|++++ ++.+|+..+ +|+|.||+++||+.|+|||+|
T Consensus 231 ~~v~~i~~~~-~~~-~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~G 308 (464)
T 2eq6_A 231 TKAVGYEKKK-DGL-HVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYAIG 308 (464)
T ss_dssp EEEEEEEEET-TEE-EEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCCTTCBCSSTTEEECG
T ss_pred CEEEEEEEeC-CEE-EEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEECCCcccCCCCEEEEe
Confidence 9999998643 333 46665 6 76 8999999999999999986 578888875 577999999999999999999
Q ss_pred cccccCCccCCcccccchHHHHHHHHHHHHHHHhcCCC-CCCCCCCceeeecccccCCCcceeeEEeecCCC-------c
Q 012165 323 DVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG-------E 394 (469)
Q Consensus 323 D~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~-~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~-------~ 394 (469)
||+..+. .+..|..||+.+|++|++... ..+. +|++ . |..+ .+..+|.... +
T Consensus 309 D~~~~~~----------l~~~A~~~g~~aa~~i~g~~~~~~~~-~p~~--~-~~~~------~~a~vG~~e~~a~~~g~~ 368 (464)
T 2eq6_A 309 DAARPPL----------LAHKAMREGLIAAENAAGKDSAFDYQ-VPSV--V-YTSP------EWAGVGLTEEEAKRAGYK 368 (464)
T ss_dssp GGTCSSC----------CHHHHHHHHHHHHHHHTTCCCCCCCC-CCEE--E-CSSS------EEEEEECCHHHHHHTTCC
T ss_pred ccCCCcc----------cHHHHHHHHHHHHHHhcCCCcccCCC-CCeE--E-ECCC------CEEEEeCCHHHHHhcCCC
Confidence 9997543 345699999999999997432 1344 6652 2 2211 1455664321 1
Q ss_pred EEE--E----------ccCCCcEEEEEEe--CCEEEEEEeecCChHH-hHHHHHHHhCCCCCCh--hhhcCCCcHHHHHH
Q 012165 395 TIE--I----------GNFDPKIATFWID--SGKLKGVLVESGSPEE-FQLLPTLARSQPFVDK--AKLQQASSVEEALE 457 (469)
Q Consensus 395 ~~~--~----------~~~~~~~~~~~~~--~~~l~g~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 457 (469)
... . ......|.|++++ +++|+|+++++..+.+ +..+..+|+.+.+++. ..+..||++.|++.
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~g~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~ 448 (464)
T 2eq6_A 369 VKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSESLM 448 (464)
T ss_dssp EEEEEEEGGGCHHHHHTSCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCTTHHHH
T ss_pred EEEEEEEcCcchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHH
Confidence 111 0 0112347788886 6999999997777755 4556677888887763 33578999999999
Q ss_pred HHHhcCCcc
Q 012165 458 IARAALPVE 466 (469)
Q Consensus 458 ~~~~~~~~~ 466 (469)
.|++++..+
T Consensus 449 ~~~~~~~~~ 457 (464)
T 2eq6_A 449 EAAEAFHKQ 457 (464)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHhcC
Confidence 998765543
No 32
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.7e-39 Score=333.22 Aligned_cols=386 Identities=18% Similarity=0.272 Sum_probs=257.6
Q ss_pred CCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC------CCC----------------CcccccCCCC
Q 012165 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE------RPA----------------LTKGYLFPLD 105 (469)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~------~~~----------------l~~~~~~~~~ 105 (469)
+++++||+|||||+||++||..|++.|+ +|+|||+.+.++.. .|. +.. +-....
T Consensus 22 ~m~~~dVvVIGgG~aGl~aA~~la~~G~---~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~-~g~~~~ 97 (491)
T 3urh_A 22 SMMAYDLIVIGSGPGGYVCAIKAAQLGM---KVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEA-LGVEVA 97 (491)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGG-GTEECC
T ss_pred hcccCCEEEECCCHHHHHHHHHHHHCCC---eEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhh-cCcccC
Confidence 3456999999999999999999999987 79999987654211 000 000 000000
Q ss_pred CCCCCCCCCccc---cCCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCC--eEEEeccEEeccCCCCCcCCCC
Q 012165 106 KKPARLPGFHTC---VGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEK 180 (469)
Q Consensus 106 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g--~~~~yd~lVlAtG~~~~~~~~~ 180 (469)
....+++..... ...........++++.+++++.+ .+..++.....|.+.+| .++.||+||||||++|..+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p~~i--- 173 (491)
T 3urh_A 98 NPKLNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQG-TGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDVAGI--- 173 (491)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-EEEECSSSEEEEECTTSCEEEEECSEEEECCCEECCCB---
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEecCCEEEEEeCCCceEEEEeCEEEEccCCCCCCC---
Confidence 000000000000 00000001123456789999986 55566766667777777 5799999999999986433
Q ss_pred CCCC--cCcEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe------------------eeHHHH
Q 012165 181 IGGY--LPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------------RYEQLY 240 (469)
Q Consensus 181 ~g~~--~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------------~~~~~l 240 (469)
||.. .++...+ +...+......+++++|||+|++|+|+|..|.++|.+|+ .+.+.+
T Consensus 174 pg~~~~~~~~~~~----~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l 249 (491)
T 3urh_A 174 PGVEVAFDEKTIV----SSTGALALEKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGGMDGEVAKQLQRML 249 (491)
T ss_dssp TTBCCCCCSSSEE----CHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSSSCHHHHHHHHHHH
T ss_pred CCcccccCCeeEE----ehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccccCCHHHHHHHHHHH
Confidence 3322 2222222 233333334568999999999999999999999999987 356778
Q ss_pred HHcCcEEEcCCeEEEEEeCCCCcEEEEEcCC---C--CEEeCCEEEEccCCccCCch--hhhcCCccc-CCCEEeCCCCC
Q 012165 241 QQNGVKFVKGASIKNLEAGSDGRVAAVKLED---G--STIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFR 312 (469)
Q Consensus 241 ~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~---g--~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~Vd~~~~ 312 (469)
++.||++++++++++++.++++ + .+.+.+ | +++++|.||+|+|++|++++ ++..++..+ +|+|.||+++|
T Consensus 250 ~~~gV~v~~~~~v~~i~~~~~~-~-~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~ 327 (491)
T 3urh_A 250 TKQGIDFKLGAKVTGAVKSGDG-A-KVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHFQ 327 (491)
T ss_dssp HHTTCEEECSEEEEEEEEETTE-E-EEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCTTCB
T ss_pred HhCCCEEEECCeEEEEEEeCCE-E-EEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECCCCC
Confidence 8999999999999999865333 2 355542 5 57999999999999999987 788888876 57799999999
Q ss_pred CCCCceEEeccccccCCccCCcccccchHHHHHHHHHHHHHHHhcCCC-CCCCCCCceeeecccccCCCcceeeEEeecC
Q 012165 313 TRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDN 391 (469)
Q Consensus 313 t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~-~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~ 391 (469)
|+.|+|||+|||+..+. .+..|..+|+.+|++|++... ..+..+|+ .. |..+. +..+|.+
T Consensus 328 t~~~~IyA~GD~~~~~~----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~--~~-~~~p~------~a~vGlt 388 (491)
T 3urh_A 328 TSIAGVYAIGDVVRGPM----------LAHKAEDEGVAVAEIIAGQAGHVNYDVIPG--VV-YTQPE------VASVGKT 388 (491)
T ss_dssp CSSTTEEECGGGSSSCC----------CHHHHHHHHHHHHHHHTTSCCCCCTTCCCE--EE-CSSSC------EEEEECC
T ss_pred CCCCCEEEEEecCCCcc----------chhHHHHHHHHHHHHHcCCCcccCCCCCCE--EE-EccCC------eEEEeCC
Confidence 99999999999996542 455699999999999997432 23455664 22 33221 5556654
Q ss_pred CC-------cEEE-Ec-----------cCCCcEEEEEEe--CCEEEEEEeecCChHHhHH-HHHHHhCCCCCCh--hhhc
Q 012165 392 VG-------ETIE-IG-----------NFDPKIATFWID--SGKLKGVLVESGSPEEFQL-LPTLARSQPFVDK--AKLQ 447 (469)
Q Consensus 392 ~~-------~~~~-~~-----------~~~~~~~~~~~~--~~~l~g~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~ 447 (469)
+. +... .- .....+.|+.++ +++|+|+++++.++.++.. +..+|+.+.+++. ..+.
T Consensus 389 e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~ 468 (491)
T 3urh_A 389 EEELKAAGVAYKIGKFPFTANGRARAMLQTDGFVKILADKETDRVLGGHIIGFGAGEMIHEIAVLMEFGGSSEDLGRTCH 468 (491)
T ss_dssp HHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCC
T ss_pred HHHHHhCCCCEEEEEEecCcchhhhcCCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCcc
Confidence 32 1111 10 011347777775 5999999998887766554 4556788887763 2247
Q ss_pred CCCcHHHHHHHHHhcCCcc
Q 012165 448 QASSVEEALEIARAALPVE 466 (469)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~ 466 (469)
.||++.|++++|+.++..+
T Consensus 469 ~hPt~~e~~~~~~~~~~~~ 487 (491)
T 3urh_A 469 AHPTMSEAVKEAALSTFFK 487 (491)
T ss_dssp CSSCTTHHHHHHHHHHHC-
T ss_pred CCCChHHHHHHHHHHhhhc
Confidence 7899999999999876544
No 33
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=1.2e-40 Score=341.40 Aligned_cols=299 Identities=20% Similarity=0.302 Sum_probs=220.9
Q ss_pred HHHC-CcEEEeCCcEEEEeCCCcEEEeC---C-----CeEEEeccEEeccCCCCCcCCCCCCCCcCcEEEecCHHHHHHH
Q 012165 130 YKEK-GIEMIYQDPVTSIDIEKQTLITN---S-----GKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADAL 200 (469)
Q Consensus 130 ~~~~-~i~~~~~~~v~~id~~~~~v~~~---~-----g~~~~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~ 200 (469)
+++. +++++.+ ++..++. ++|.+. + ++++.||+||||||++|+ .|.++|. +.+.+ .+.+
T Consensus 117 l~~~~gv~~~~g-~~~~i~~--~~v~v~~~~~~~~~~~~~~~~d~lViATGs~p~-~p~i~G~--~~~~~------~~~~ 184 (495)
T 2wpf_A 117 FNDTEGLDFFLG-WGSLESK--NVVVVRETADPKSAVKERLQADHILLATGSWPQ-MPAIPGI--EHCIS------SNEA 184 (495)
T ss_dssp HHHCTTEEEEES-EEEEEET--TEEEEESSSSTTSCEEEEEEEEEEEECCCEEEC-CCCCTTG--GGCEE------HHHH
T ss_pred HhcCCCeEEEEe-EEEEeeC--CEEEEeecCCccCCCCeEEEcCEEEEeCCCCcC-CCCCCCc--ccccc------HHHH
Confidence 4567 9999987 5777764 567775 4 678999999999999987 4555553 22222 2333
Q ss_pred HHhhhcCCeEEEEcCChHHHHHHHHHHhC---CCeEe------------------eeHHHHHHcCcEEEcCCeEEEEEeC
Q 012165 201 ISSLEKAKKVVVVGGGYIGMEVAAAAVGW---KLDTT------------------RYEQLYQQNGVKFVKGASIKNLEAG 259 (469)
Q Consensus 201 ~~~~~~~~~vvVvG~G~~g~e~A~~l~~~---g~~v~------------------~~~~~l~~~gV~~~~~~~v~~i~~~ 259 (469)
......+++++|||+|++|+|+|..|.++ |.+|+ .+.+.+++.||++++++.|++++.+
T Consensus 185 ~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~ 264 (495)
T 2wpf_A 185 FYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLN 264 (495)
T ss_dssp TTCSSCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEEEC
T ss_pred HhhhhcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEc
Confidence 33334579999999999999999999999 99987 3467788999999999999999865
Q ss_pred CCCcEEEEEcCCCCEEeCCEEEEccCCccCCch--hhhcCCccc-CCCEEeCCCCCCCCCceEEeccccccCCccCCccc
Q 012165 260 SDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTA 336 (469)
Q Consensus 260 ~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~ 336 (469)
+++. ..+.+++|+++++|.||+|+|++||+++ ++++|++.+ +|+|.||+++||++|+|||+|||+..+.
T Consensus 265 ~~~~-~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~~------- 336 (495)
T 2wpf_A 265 TDGS-KHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDITDRLM------- 336 (495)
T ss_dssp TTSC-EEEEETTSCEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBCCCTTCBCSSTTEEECGGGGCSCC-------
T ss_pred CCce-EEEEECCCcEEEcCEEEECCCCcccccccchhhcCccCCCCCCEEECCCCccCCCCEEEEeccCCCcc-------
Confidence 3333 3678889999999999999999999984 688898876 6789999999999999999999996432
Q ss_pred ccchHHHHHHHHHHHHHHHhcCCC--CCCCCCCceeeecccccCCCcceeeEEeecCCCc-------EEE-E--------
Q 012165 337 RVEHVDHARQSAQHCIKALLSAQT--HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------TIE-I-------- 398 (469)
Q Consensus 337 ~~~~~~~A~~~a~~~a~~i~~~~~--~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~~-------~~~-~-------- 398 (469)
.+..|..||+.+|.+|++... ..|..+|+ ..|..+. +..+|....+ ... .
T Consensus 337 ---l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~---~~~~~~~------~a~vGl~e~~a~~~~~~~~v~~~~~~~~~~ 404 (495)
T 2wpf_A 337 ---LTPVAINEGAALVDTVFGNKPRKTDHTRVAS---AVFSIPP------IGTCGLIEEVAAKEFEKVAVYMSSFTPLMH 404 (495)
T ss_dssp ---CHHHHHHHHHHHHHHHHSSCCCCCCCSSCEE---EECCSSC------EEEEECCHHHHHHHSSEEEEEEEEECCTHH
T ss_pred ---CHHHHHHHHHHHHHHhcCCCCCcCCCCCCCE---EEECCCC------eEEEeCCHHHHHhcCCCEEEEEEecCchhh
Confidence 456799999999999997443 23555553 2232221 5556654321 111 1
Q ss_pred ---ccCCCcE-EEEEEe--CCEEEEEEeecCChHHhHH-HHHHHhCCCCCCh--hhhcCCCcHHHHHHHHH
Q 012165 399 ---GNFDPKI-ATFWID--SGKLKGVLVESGSPEEFQL-LPTLARSQPFVDK--AKLQQASSVEEALEIAR 460 (469)
Q Consensus 399 ---~~~~~~~-~~~~~~--~~~l~g~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 460 (469)
+.....| .|++++ +++|+|+++++.++.++.. +..+|+.+.+++. ..++.||++.|+++.++
T Consensus 405 ~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 475 (495)
T 2wpf_A 405 NISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPTSAEELCSMR 475 (495)
T ss_dssp HHHSCTTCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGGGGSCC
T ss_pred hhhcCCCcEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHHHH
Confidence 1112347 888886 6999999997777765444 5556788887762 33578999999988765
No 34
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.5e-40 Score=338.70 Aligned_cols=384 Identities=17% Similarity=0.233 Sum_probs=245.3
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC--CCCCCc-ccc---------c-----CCCCC-CCCCCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY--ERPALT-KGY---------L-----FPLDK-KPARLP 112 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~--~~~~l~-~~~---------~-----~~~~~-~~~~~~ 112 (469)
++||+|||||+||+++|.+|++.|. +|+|||+++..+- .+...+ +.+ + +.... ...+++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~---~V~liE~~~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 78 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNA---KVALVEKSRLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLP 78 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSTTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCC---cEEEEeCCCcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHH
Confidence 4799999999999999999999987 7999999852100 000000 000 0 00000 000100
Q ss_pred CCccccC---CCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCC-------------CeEEEeccEEeccCCCCCc
Q 012165 113 GFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNS-------------GKLLKYGSLIVATGCTASR 176 (469)
Q Consensus 113 ~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~-------------g~~~~yd~lVlAtG~~~~~ 176 (469)
.+..... .........++++.+++++.+. +..++. +++++.+ +.++.||+||||||++|.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~id~--~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~- 154 (500)
T 1onf_A 79 LLVERRDKYIQRLNNIYRQNLSKDKVDLYEGT-ASFLSE--NRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPV- 154 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-CCCC----------------------------CBSSEEECCCCCBC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEeeC--CEEEEEeccccccccccCCCceEEEeCEEEECCCCCCC-
Confidence 0000000 0000011234567899999874 444554 4455533 567999999999999987
Q ss_pred CCCCCCCCcCcEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe------------------eeHH
Q 012165 177 FPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------------RYEQ 238 (469)
Q Consensus 177 ~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------------~~~~ 238 (469)
.|.++|. +.+.+ .+.+..... +++++|||+|++|+|+|..|+++|.+|+ .+.+
T Consensus 155 ~p~i~G~--~~~~~------~~~~~~~~~-~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~ 225 (500)
T 1onf_A 155 FPPVKGI--ENTIS------SDEFFNIKE-SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRKFDESVINVLEN 225 (500)
T ss_dssp CCSCTTG--GGCEE------HHHHTTCCC-CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTTSCHHHHHHHHH
T ss_pred CCCCCCC--CcccC------HHHHhccCC-CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcccchhhHHHHHH
Confidence 4555553 22222 223222222 8999999999999999999999999998 4467
Q ss_pred HHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCE-EeCCEEEEccCCccCCc-h-hhhcCCcccCCCEEeCCCCCCCC
Q 012165 239 LYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGST-IDADTIVIGIGAKPTVS-P-FERVGLNSSVGGIQVDGQFRTRM 315 (469)
Q Consensus 239 ~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~-i~~D~vi~a~G~~p~~~-~-~~~~gl~~~~g~i~Vd~~~~t~~ 315 (469)
.+++.||++++++.+++++.++++.+ .+.+++|++ +++|.||+|+|++|+++ + ++++|++.++|+|.||+++||++
T Consensus 226 ~l~~~gv~i~~~~~v~~i~~~~~~~~-~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~G~i~vd~~~~t~~ 304 (500)
T 1onf_A 226 DMKKNNINIVTFADVVEIKKVSDKNL-SIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVETNNNYIVVDENQRTSV 304 (500)
T ss_dssp HHHHTTCEEECSCCEEEEEESSTTCE-EEEETTSCEEEEESEEEECCCBCCTTTTSSCTTTTCCBSSSCEEECTTCBCSS
T ss_pred HHHhCCCEEEECCEEEEEEEcCCceE-EEEECCCcEEEECCEEEECCCCCcCCCCCCchhcCccccCCEEEECCCcccCC
Confidence 78899999999999999986544433 578889988 99999999999999986 4 68888887667899999999999
Q ss_pred CceEEeccccccCCcc-----------------------CC-cccccchHHHHHHHHHHHHHHHhcCCC--CCCCCCCce
Q 012165 316 PGIFAIGDVAAFPLKM-----------------------YD-RTARVEHVDHARQSAQHCIKALLSAQT--HTYDYLPYF 369 (469)
Q Consensus 316 ~~Vfa~GD~a~~~~~~-----------------------~~-~~~~~~~~~~A~~~a~~~a~~i~~~~~--~~~~~~p~~ 369 (469)
|+|||+|||+..+... .+ .......+..|..||+.+|+||+++.. ..|..+|+.
T Consensus 305 ~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~ 384 (500)
T 1onf_A 305 NNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFLKKTRKTNYKLIPTV 384 (500)
T ss_dssp SSEEECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHHSCTTCCCCCSSCCEE
T ss_pred CCEEEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhCCCCccCCCCCCCeE
Confidence 9999999999432100 00 001244677899999999999997543 235556642
Q ss_pred eeecccccCCCcceeeEEeecCCC---------cEEE----------------EccCCCcEEEEEEe--CCEEEEEEeec
Q 012165 370 YSRVFEYEGSPRKVWWQFFGDNVG---------ETIE----------------IGNFDPKIATFWID--SGKLKGVLVES 422 (469)
Q Consensus 370 ~~~~~~~~g~~~~~~~~~~G~~~~---------~~~~----------------~~~~~~~~~~~~~~--~~~l~g~~~~~ 422 (469)
.|..+. +..+|.... +... .......|.|+.++ +++|+|+++++
T Consensus 385 ---~~~~~~------~a~vGl~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g 455 (500)
T 1onf_A 385 ---IFSHPP------IGTIGLSEEAAIQIYGKENVKIYESKFTNLFFSVYDIEPELKEKTYLKLVCVGKDELIKGLHIIG 455 (500)
T ss_dssp ---ECCSSC------EEEEECCHHHHHHHTCGGGEEEEEEEECCGGGTTSCSCGGGSCCEEEEEEEETTTTEEEEEEEES
T ss_pred ---EEcCcc------eEEEeCCHHHHHhcCCCccEEEEEEECchhhhhhccccccCCCceEEEEEEECCCCEEEEEEEEC
Confidence 232111 444554311 1111 01112347788774 69999999877
Q ss_pred CChHHhHHH-HHHHhCCCCCCh--hhhcCCCcHHHHHHHHH
Q 012165 423 GSPEEFQLL-PTLARSQPFVDK--AKLQQASSVEEALEIAR 460 (469)
Q Consensus 423 ~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 460 (469)
.++.++... ..+++.+.+++. ..+..||++.|++..++
T Consensus 456 ~~a~~~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~ 496 (500)
T 1onf_A 456 LNADEIVQGFAVALKMNATKKDFDETIPIHPTAAEEFLTLQ 496 (500)
T ss_dssp TTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCSTTHHHHCC
T ss_pred CCHHHHHHHHHHHHHcCCCHHHHhccccCCCCHHHHHHHhc
Confidence 767665544 455788877662 23578999999998764
No 35
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=1.9e-40 Score=339.66 Aligned_cols=376 Identities=18% Similarity=0.232 Sum_probs=254.5
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHH-cCCCCCcEEEEcC--------CCCCCCCC---CCCc-cccc--------------C
Q 012165 50 ENREFVIVGGGNAAGYAARTFVE-HGMADGRLCIVSK--------EAYAPYER---PALT-KGYL--------------F 102 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~-~g~~~~~V~vie~--------~~~~~~~~---~~l~-~~~~--------------~ 102 (469)
.++||+|||||+||+++|.+|++ .|. +|+|||+ ...++... -..+ +.++ +
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~---~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~ 78 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKK---RVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGF 78 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCC---CEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGG
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCC---EEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhc
Confidence 35899999999999999999999 887 7999993 22111100 0000 0000 0
Q ss_pred CCCC--C--CCCCCCCccccC---CCCCCCCHhHHHHC-CcEEEeCCcEEEEeCCCcEEEeC-----CC---eEEEeccE
Q 012165 103 PLDK--K--PARLPGFHTCVG---SGGERQTPEWYKEK-GIEMIYQDPVTSIDIEKQTLITN-----SG---KLLKYGSL 166 (469)
Q Consensus 103 ~~~~--~--~~~~~~~~~~~~---~~~~~~~~~~~~~~-~i~~~~~~~v~~id~~~~~v~~~-----~g---~~~~yd~l 166 (469)
.... . ..++..+..... ..........+++. +++++.+ ++..++. +++.+. +| .++.||+|
T Consensus 79 g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g-~~~~i~~--~~v~v~~~~~~~g~~~~~~~~d~l 155 (490)
T 1fec_A 79 GWELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQG-FGALQDN--HTVLVRESADPNSAVLETLDTEYI 155 (490)
T ss_dssp TEECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEES-EEEEEET--TEEEEESSSSTTSCEEEEEEEEEE
T ss_pred CcccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEe-EEEEeeC--CEEEEEeeccCCCCceEEEEcCEE
Confidence 0000 0 000000000000 00000012234567 9999987 5777875 455553 66 67999999
Q ss_pred EeccCCCCCcCCCCCCCCcCcEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhC---CCeEe---------
Q 012165 167 IVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGW---KLDTT--------- 234 (469)
Q Consensus 167 VlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~---g~~v~--------- 234 (469)
|||||++|. .|.++|. +. +.+ .+.+......+++++|||+|++|+|+|..|.++ |.+|+
T Consensus 156 viAtGs~p~-~p~i~g~--~~---~~~---~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l 226 (490)
T 1fec_A 156 LLATGSWPQ-HLGIEGD--DL---CIT---SNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL 226 (490)
T ss_dssp EECCCEEEC-CCCSBTG--GG---CBC---HHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS
T ss_pred EEeCCCCCC-CCCCCCc--cc---eec---HHHHhhhhhcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc
Confidence 999999987 4555553 22 222 233333334579999999999999999999999 99987
Q ss_pred ---------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCc-h-hhhcCCccc-C
Q 012165 235 ---------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS-P-FERVGLNSS-V 302 (469)
Q Consensus 235 ---------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~-~-~~~~gl~~~-~ 302 (469)
.+.+.+++.||++++++.+++++.++++.+ .+.+++|+++++|.||+|+|++|+++ + ++.+|++.+ +
T Consensus 227 ~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~ 305 (490)
T 1fec_A 227 RGFDSELRKQLTEQLRANGINVRTHENPAKVTKNADGTR-HVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKN 305 (490)
T ss_dssp TTSCHHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCE-EEEETTSCEEEESEEEECSCEEESCTTSCGGGGTCCBCTT
T ss_pred cccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEE-EEEECCCcEEEcCEEEEccCCCcCccccCchhcCccCCCC
Confidence 356778899999999999999986543433 67888998999999999999999987 4 688899876 6
Q ss_pred CCEEeCCCCCCCCCceEEeccccccCCccCCcccccchHHHHHHHHHHHHHHHhcCCC--CCCCCCCceeeecccccCCC
Q 012165 303 GGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT--HTYDYLPYFYSRVFEYEGSP 380 (469)
Q Consensus 303 g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~--~~~~~~p~~~~~~~~~~g~~ 380 (469)
|+|.||+++||++|+|||+|||+..+ ..+..|..+|+.+|.+|++... ..|..+|+ ..|..+.
T Consensus 306 G~I~Vd~~~~t~~~~IyA~GD~~~~~----------~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~---~~~~~~~-- 370 (490)
T 1fec_A 306 GAIKVDAYSKTNVDNIYAIGDVTDRV----------MLTPVAINEGAAFVDTVFANKPRATDHTKVAC---AVFSIPP-- 370 (490)
T ss_dssp SCBCCCTTCBCSSTTEEECGGGGCSC----------CCHHHHHHHHHHHHHHHHSSCCCCCCCSSCCE---EECCSSC--
T ss_pred CCEEECCCCccCCCCEEEEeccCCCc----------cCHHHHHHHHHHHHHHhcCCCCCcCCCCCccE---EEECCCC--
Confidence 78999999999999999999999642 2456799999999999997433 34555664 2232221
Q ss_pred cceeeEEeecCCCc-------EEE-E-----------ccCCCcEE-EEEEe--CCEEEEEEeecCChHHhH-HHHHHHhC
Q 012165 381 RKVWWQFFGDNVGE-------TIE-I-----------GNFDPKIA-TFWID--SGKLKGVLVESGSPEEFQ-LLPTLARS 437 (469)
Q Consensus 381 ~~~~~~~~G~~~~~-------~~~-~-----------~~~~~~~~-~~~~~--~~~l~g~~~~~~~~~~~~-~~~~~~~~ 437 (469)
+..+|....+ ... . ......|. |++++ +++|+|+++++.++.++. .+..+|+.
T Consensus 371 ----~a~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~ 446 (490)
T 1fec_A 371 ----MGVCGYVEEDAAKKYDQVAVYESSFTPLMHNISGSTYKKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLKM 446 (490)
T ss_dssp ----EEEEECCHHHHHHHCSEEEEEEEEECCHHHHHHSCTTCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHT
T ss_pred ----eEEEeCCHHHHHhcCCCEEEEEeecChhhhhhhcCCCeEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHc
Confidence 5566654321 111 1 11123477 88886 699999999777776644 45556788
Q ss_pred CCCCCh--hhhcCCCcHHHHHHHHH
Q 012165 438 QPFVDK--AKLQQASSVEEALEIAR 460 (469)
Q Consensus 438 ~~~~~~--~~~~~~~~~~~~~~~~~ 460 (469)
+.+++. ..++.||++.|+++.++
T Consensus 447 ~~t~~~l~~~~~~hPt~~e~~~~~~ 471 (490)
T 1fec_A 447 GAKISDFYNTIGVHPTSAEELCSMR 471 (490)
T ss_dssp TCBHHHHHTSCCCSSCSGGGGGSCC
T ss_pred CCCHHHHhccccCCCCHHHHHHHHH
Confidence 887662 23578999999998765
No 36
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=7.1e-40 Score=333.77 Aligned_cols=383 Identities=16% Similarity=0.183 Sum_probs=258.5
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC---CCC-ccccc-----------CCCCCCCCCCCCCc
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER---PAL-TKGYL-----------FPLDKKPARLPGFH 115 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~---~~l-~~~~~-----------~~~~~~~~~~~~~~ 115 (469)
++||+|||||+||+++|..|++.|. +|+|||+.+.++..- ... ++.++ ........+++.+.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~---~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~ 80 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKY---NVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQ 80 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCC---eEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHH
Confidence 4899999999999999999999987 799999776543110 000 00000 00000000110000
Q ss_pred cccCC--CCC--CCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCeE--EEeccEEeccCCCCCcCCCCCCCCcCcEE
Q 012165 116 TCVGS--GGE--RQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKL--LKYGSLIVATGCTASRFPEKIGGYLPGVH 189 (469)
Q Consensus 116 ~~~~~--~~~--~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~--~~yd~lVlAtG~~~~~~~~~~g~~~~~v~ 189 (469)
..... ... .....++++.+++++.+ ++..++.....|.+.+|++ +.||+||||||+.|. .|.++|.+ +
T Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~-~p~i~G~~--~-- 154 (466)
T 3l8k_A 81 DRKDYVQELRFKQHKRNMSQYETLTFYKG-YVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETA-KLRLPGVE--Y-- 154 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTEEEESE-EEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEEC-CCCCTTGG--G--
T ss_pred HHHHhheeccccchHHHHHHhCCCEEEEe-EEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCcc-CCCCCCcc--c--
Confidence 00000 000 01122334568999886 8889998878888888888 999999999999987 45555533 3
Q ss_pred EecCHHHHHHHH-HhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe-----------e----eHHHH-HHcCcEEEcCCe
Q 012165 190 YIRDVADADALI-SSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT-----------R----YEQLY-QQNGVKFVKGAS 252 (469)
Q Consensus 190 ~~~~~~~~~~~~-~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~-----------~----~~~~l-~~~gV~~~~~~~ 252 (469)
+.+..+...+. .....+++++|||+|++|+|+|..|.++|.+|+ . +.+.+ +...|++++++.
T Consensus 155 -~~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~v~i~~~~~ 233 (466)
T 3l8k_A 155 -CLTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITLEDQDIVNTLLSILKLNIKFNSP 233 (466)
T ss_dssp -SBCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCCHHHHHHHHHHHCCCEECSCC
T ss_pred -eEeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCCCCHHHHHHHHhcCEEEEEECCE
Confidence 33333333111 222357899999999999999999999999988 1 11122 223499999999
Q ss_pred EEEEEeCCCCcEEEEEcC--CCC--EEeCCEEEEccCCccCCch-hhhcCCcccCCCEEeCCCCCCCCCceEEecccccc
Q 012165 253 IKNLEAGSDGRVAAVKLE--DGS--TIDADTIVIGIGAKPTVSP-FERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAF 327 (469)
Q Consensus 253 v~~i~~~~~~~v~~v~~~--~g~--~i~~D~vi~a~G~~p~~~~-~~~~gl~~~~g~i~Vd~~~~t~~~~Vfa~GD~a~~ 327 (469)
+++++..+++.+ .+.++ +|+ ++++|.||+|+|++|++++ ++++|++.+.++|.||+++||++|+|||+|||+..
T Consensus 234 v~~i~~~~~~~v-~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~l~l~~~gl~~~~~Gi~vd~~~~t~~~~Iya~GD~~~~ 312 (466)
T 3l8k_A 234 VTEVKKIKDDEY-EVIYSTKDGSKKSIFTNSVVLAAGRRPVIPEGAREIGLSISKTGIVVDETMKTNIPNVFATGDANGL 312 (466)
T ss_dssp EEEEEEEETTEE-EEEECCTTSCCEEEEESCEEECCCEEECCCTTTGGGTCCBCSSSBCCCTTCBCSSTTEEECGGGTCS
T ss_pred EEEEEEcCCCcE-EEEEEecCCceEEEEcCEEEECcCCCcccccchhhcCceeCCCCEeECCCccCCCCCEEEEEecCCC
Confidence 999986432444 46776 676 8999999999999999985 78889987643499999999999999999999986
Q ss_pred CCccCCcccccchHHHHHHHHHHHHHHHhcC--CCC--CCCCCCceeeecccccCCCcceeeEEeecCCC-------cEE
Q 012165 328 PLKMYDRTARVEHVDHARQSAQHCIKALLSA--QTH--TYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG-------ETI 396 (469)
Q Consensus 328 ~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~--~~~--~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~-------~~~ 396 (469)
+. .+..|..+|+.+|+||++. ... .+..+|+ ..|..+. +..+|.+.. +..
T Consensus 313 ~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~---~~~~~~~------~a~vG~te~~a~~~g~~~~ 373 (466)
T 3l8k_A 313 AP----------YYHAAVRMSIAAANNIMANGMPVDYVDVKSIPV---TIYTIPS------LSYVGILPSKARKMGIEIV 373 (466)
T ss_dssp CC----------SHHHHHHHHHHHHHHHHTTTSCCCCCCSTTSCE---EECSSSC------EEEEECCHHHHHHHTCCEE
T ss_pred Cc----------cHhHHHHHHHHHHHHHhCCCCCccccCCCCCcE---EEECCCC------eEEecCCHHHHHhCCCCEE
Confidence 32 4556999999999999975 332 3445554 2343221 556665432 111
Q ss_pred E-Ec-----------cCCCcEEEEEEe--CCEEEEEEeecCChHHhH-HHHHHHhCCCCCCh--hhhcCCCcHHHHHHHH
Q 012165 397 E-IG-----------NFDPKIATFWID--SGKLKGVLVESGSPEEFQ-LLPTLARSQPFVDK--AKLQQASSVEEALEIA 459 (469)
Q Consensus 397 ~-~~-----------~~~~~~~~~~~~--~~~l~g~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 459 (469)
. .- .....+.|++++ +++|+|+++++.++.++. .+..+|+.+.+++. ..+..||++.|+++.|
T Consensus 374 ~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~ 453 (466)
T 3l8k_A 374 EAEYNMEEDVSAQIYGQKEGVLKLIFERGSMRLIGAWMIGVHSQYLINELGLAVAYGLNAKQLASFAEQHPSTNEIISYT 453 (466)
T ss_dssp EEEEEGGGSHHHHHHTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHCCCCTTSTTHHHHHH
T ss_pred EEEEEcccChhheecCCCeEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCcCCHHHHhccccCCCChHHHHHHH
Confidence 1 10 012347787775 499999999888776544 45556788887762 3357899999999999
Q ss_pred HhcC
Q 012165 460 RAAL 463 (469)
Q Consensus 460 ~~~~ 463 (469)
+.+.
T Consensus 454 ~~~~ 457 (466)
T 3l8k_A 454 ARKV 457 (466)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 37
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=1.8e-40 Score=336.59 Aligned_cols=373 Identities=18% Similarity=0.218 Sum_probs=251.8
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC--CCCC-cccccC----------CCCC-------CCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE--RPAL-TKGYLF----------PLDK-------KPA 109 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~--~~~l-~~~~~~----------~~~~-------~~~ 109 (469)
.++||+|||||+||+++|.+|++.|. +|+|||++...+-. .... ++.++. .... ...
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~---~V~liE~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~ 79 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQ---KCALIEAKELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKF 79 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTC---CEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCC---eEEEEcCCCCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCcc
Confidence 35799999999999999999999886 79999997421000 0000 000000 0000 000
Q ss_pred CCCCCcccc---CCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCCcCCCCCCCCcC
Q 012165 110 RLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLP 186 (469)
Q Consensus 110 ~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~~ 186 (469)
++..+.... ...........+++.+++++.+ ++..++. ++|.+ +++++.||+||||||++|. .|.++|. +
T Consensus 80 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~i~~--~~v~~-~g~~~~~d~lviAtGs~p~-~p~i~g~--~ 152 (450)
T 1ges_A 80 NWETLIASRTAYIDRIHTSYENVLGKNNVDVIKG-FARFVDA--KTLEV-NGETITADHILIATGGRPS-HPDIPGV--E 152 (450)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CCEEEET--TEEEE-TTEEEEEEEEEECCCEEEC-CCCSTTG--G
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEecC--CEEEE-CCEEEEeCEEEECCCCCCC-CCCCCCc--c
Confidence 000000000 0000000123346789999987 5566764 56777 6778999999999999987 4555553 2
Q ss_pred cEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe------------------eeHHHHHHcCcEEE
Q 012165 187 GVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------------RYEQLYQQNGVKFV 248 (469)
Q Consensus 187 ~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------------~~~~~l~~~gV~~~ 248 (469)
. ..+. +.+......+++++|||+|++|+|+|..|+++|.+|+ .+.+.+++.||+++
T Consensus 153 ~---~~~~---~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~ 226 (450)
T 1ges_A 153 Y---GIDS---DGFFALPALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLH 226 (450)
T ss_dssp G---SBCH---HHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEEE
T ss_pred c---eecH---HHhhhhhhcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhhhhHHHHHHHHHHHHHCCCEEE
Confidence 1 2222 3333333467999999999999999999999999988 44677888999999
Q ss_pred cCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCch--hhhcCCccc-CCCEEeCCCCCCCCCceEEecccc
Q 012165 249 KGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVA 325 (469)
Q Consensus 249 ~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~Vd~~~~t~~~~Vfa~GD~a 325 (469)
+++++++++.++++.+ .+.+++|+++++|.||+|+|++|++++ ++++|++.+ +|+|.||+++||++|+|||+|||+
T Consensus 227 ~~~~v~~i~~~~~~~~-~v~~~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~~~t~~~~IyA~GD~~ 305 (450)
T 1ges_A 227 TNAIPKAVVKNTDGSL-TLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGDNT 305 (450)
T ss_dssp CSCCEEEEEECTTSCE-EEEETTSCEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECSGGG
T ss_pred eCCEEEEEEEeCCcEE-EEEECCCcEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeECCCCccCCCCEEEEeccC
Confidence 9999999986544433 678889999999999999999999973 688888876 677999999999999999999998
Q ss_pred ccCCccCCcccccchHHHHHHHHHHHHHHHhcCCC---CCCCCCCceeeecccccCCCcceeeEEeecCCC---------
Q 012165 326 AFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT---HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG--------- 393 (469)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~---~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~--------- 393 (469)
..+. .+..|..||+.+|.||++... ..|..+|+. .|..+. +..+|....
T Consensus 306 ~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~---~~~~~~------~a~vG~~e~~a~~~~g~~ 366 (450)
T 1ges_A 306 GAVE----------LTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTV---VFSHPP------IGTVGLTEPQAREQYGDD 366 (450)
T ss_dssp TSCC----------CHHHHHHHHHHHHHHHHTTCTTCCCCCSSCCEE---ECCSSC------EEEEECCHHHHHHHHCGG
T ss_pred CCCc----------cHHHHHHHHHHHHHHHcCCCCcccCCCCCCCeE---EECCCc------eEEEeCCHHHHHhcCCCC
Confidence 6432 455699999999999997432 245556652 232211 444554311
Q ss_pred cEEEE------------ccCCCcEEEEEEe--CCEEEEEEeecCChHHhHHH-HHHHhCCCCCCh--hhhcCCCcHHHHH
Q 012165 394 ETIEI------------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVDK--AKLQQASSVEEAL 456 (469)
Q Consensus 394 ~~~~~------------~~~~~~~~~~~~~--~~~l~g~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~ 456 (469)
..... ......|.|+.++ +++|+|+++++.++.++... ..+++.+.+++. ..++.|||+.|++
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~ 446 (450)
T 1ges_A 367 QVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEF 446 (450)
T ss_dssp GEEEEEEEEECHHHHTSSSCCEEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGG
T ss_pred cEEEEEEECchhhHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCChHHHH
Confidence 11110 0112236777775 69999999977777665554 445788877662 2357899999987
Q ss_pred HH
Q 012165 457 EI 458 (469)
Q Consensus 457 ~~ 458 (469)
+.
T Consensus 447 ~~ 448 (450)
T 1ges_A 447 VT 448 (450)
T ss_dssp GS
T ss_pred Hh
Confidence 64
No 38
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=9.1e-39 Score=326.74 Aligned_cols=384 Identities=17% Similarity=0.218 Sum_probs=261.1
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcc----------------------------ccc
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTK----------------------------GYL 101 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~----------------------------~~~ 101 (469)
+++||+|||||+||++||..|++.|+ +|+|||+++..+.. ..+.. .+-
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~---~V~liEk~~~~gG~-~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g 77 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGL---KTALIEKYKGKEGK-TALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHG 77 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTC---CEEEEECCBCTTSS-BCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCC---EEEEEeCCCccCCC-CCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 46899999999999999999999987 79999998632111 00000 000
Q ss_pred CCCCCCCCCCCCCcccc---CCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCC--eEEEeccEEeccCCCCCc
Q 012165 102 FPLDKKPARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASR 176 (469)
Q Consensus 102 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g--~~~~yd~lVlAtG~~~~~ 176 (469)
........+++...... ..........++++.+++++.+ .+..++.....|.+.+| .++.||+||||||++|..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~ 156 (476)
T 3lad_A 78 ISTGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEG-HGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVE 156 (476)
T ss_dssp EECSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEES-EEEECSTTCEEEECTTSCEEEECCSCEEECCCEEECC
T ss_pred cccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEecCCEEEEEcCCCceEEEEcCEEEEcCCCCCCC
Confidence 00000000000000000 0000000113455679999986 56667777777877777 579999999999999874
Q ss_pred CCCCCCCCcCcEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe------------------eeHH
Q 012165 177 FPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------------RYEQ 238 (469)
Q Consensus 177 ~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------------~~~~ 238 (469)
+|. ++.+.+.+++ +..+......+++++|||+|++|+|+|..|.++|.+|+ .+.+
T Consensus 157 ~~~-~~~~~~~v~~------~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~ 229 (476)
T 3lad_A 157 IPP-APVDQDVIVD------STGALDFQNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPAVDEQVAKEAQK 229 (476)
T ss_dssp CTT-SCCCSSSEEE------HHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHH
T ss_pred CCC-CCCCcccEEe------chhhhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcccCHHHHHHHHH
Confidence 443 3323344443 23333333567999999999999999999999999987 4567
Q ss_pred HHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCC---CEEeCCEEEEccCCccCCch--hhhcCCccc-CCCEEeCCCCC
Q 012165 239 LYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG---STIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFR 312 (469)
Q Consensus 239 ~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g---~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~Vd~~~~ 312 (469)
.+++.||++++++.+++++.++++ + .+.+.++ +++++|.||+|+|++|++++ ++.+++..+ +|+|.||+++|
T Consensus 230 ~l~~~Gv~v~~~~~v~~i~~~~~~-~-~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~ 307 (476)
T 3lad_A 230 ILTKQGLKILLGARVTGTEVKNKQ-V-TVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYCA 307 (476)
T ss_dssp HHHHTTEEEEETCEEEEEEECSSC-E-EEEEESSSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCCTTSB
T ss_pred HHHhCCCEEEECCEEEEEEEcCCE-E-EEEEEeCCCcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeCCCcc
Confidence 788999999999999999865333 3 3566554 67999999999999999874 678888876 57799999999
Q ss_pred CCCCceEEeccccccCCccCCcccccchHHHHHHHHHHHHHHHhcCCC-CCCCCCCceeeecccccCCCcceeeEEeecC
Q 012165 313 TRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDN 391 (469)
Q Consensus 313 t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~-~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~ 391 (469)
|++|+|||+|||+..+. ....|..+|+.+|++|++... ..+..+|+ . .|..+ .+..+|.+
T Consensus 308 t~~~~Iya~GD~~~~~~----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~--~-~~~~~------~~a~vGlt 368 (476)
T 3lad_A 308 TSVPGVYAIGDVVRGAM----------LAHKASEEGVVVAERIAGHKAQMNYDLIPA--V-IYTHP------EIAGVGKT 368 (476)
T ss_dssp CSSTTEEECGGGSSSCC----------CHHHHHHHHHHHHHHHHHCCCCCCTTCCCE--E-ECSSS------EEEEEECC
T ss_pred cCCCCEEEEEccCCCcc----------cHHHHHHHHHHHHHHhcCCCcccCCCCCCE--E-EECcC------CEEEeeCC
Confidence 99999999999996543 345699999999999997542 23455664 2 23322 14556654
Q ss_pred CC-------cEEE-Ecc-----------CCCcEEEEEEe--CCEEEEEEeecCChHHhHH-HHHHHhCCCCCCh--hhhc
Q 012165 392 VG-------ETIE-IGN-----------FDPKIATFWID--SGKLKGVLVESGSPEEFQL-LPTLARSQPFVDK--AKLQ 447 (469)
Q Consensus 392 ~~-------~~~~-~~~-----------~~~~~~~~~~~--~~~l~g~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~ 447 (469)
+. +... .-. ....+.|+.++ +++|+|+++++.++.++.. +..+|+.+.+++. ..++
T Consensus 369 e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~ 448 (476)
T 3lad_A 369 EQALKAEGVAINVGVFPFAASGRAMAANDTAGFVKVIADAKTDRVLGVHVIGPSAAELVQQGAIAMEFGTSAEDLGMMVF 448 (476)
T ss_dssp HHHHHHTTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSCC
T ss_pred HHHHHhcCCCEEEEEEeccccchheecCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCcc
Confidence 32 1111 000 12346777765 5999999998887766554 4556788887763 2347
Q ss_pred CCCcHHHHHHHHHhcCCcc
Q 012165 448 QASSVEEALEIARAALPVE 466 (469)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~ 466 (469)
.||++.|++++|+.++..+
T Consensus 449 ~hPt~~e~~~~~~~~~~~~ 467 (476)
T 3lad_A 449 AHPALSEALHEAALAVSGH 467 (476)
T ss_dssp CSSCSHHHHHHHHHHHTTC
T ss_pred CCCChHHHHHHHHHHHhcc
Confidence 8899999999999876554
No 39
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=6e-39 Score=326.39 Aligned_cols=374 Identities=17% Similarity=0.264 Sum_probs=252.4
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC--CCCCC-ccc----------------ccCCCCCCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY--ERPAL-TKG----------------YLFPLDKKPAR 110 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~--~~~~l-~~~----------------~~~~~~~~~~~ 110 (469)
.++||+|||||+||+++|.+|++.|. +|+|||++...+- .+... ++. +-........+
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~---~V~liE~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 79 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGK---RVALIESKALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLD 79 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCC---cEEEEcCCCCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcC
Confidence 45899999999999999999999887 7999999742100 00000 000 00000000000
Q ss_pred CCCCccccC---CCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCCcCCCCCCCCcCc
Q 012165 111 LPGFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPG 187 (469)
Q Consensus 111 ~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~~~ 187 (469)
++.+..... ..........+++.+++++.+ ++..++. ++|++ +++++.||+||||||++|. .|.++|. +.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~~--~~v~~-~g~~~~~d~lviAtGs~p~-~p~i~G~--~~ 152 (463)
T 2r9z_A 80 WPRLVAGRDRYIGAINSFWDGYVERLGITRVDG-HARFVDA--HTIEV-EGQRLSADHIVIATGGRPI-VPRLPGA--EL 152 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEEEET--TEEEE-TTEEEEEEEEEECCCEEEC-CCSCTTG--GG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEe-EEEEccC--CEEEE-CCEEEEcCEEEECCCCCCC-CCCCCCc--cc
Confidence 000000000 000000122346789999987 5666764 56777 6778999999999999987 4555553 11
Q ss_pred EEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe------------------eeHHHHHHcCcEEEc
Q 012165 188 VHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------------RYEQLYQQNGVKFVK 249 (469)
Q Consensus 188 v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------------~~~~~l~~~gV~~~~ 249 (469)
..+ .+.+......+++++|||+|.+|+|+|..|.++|.+|+ .+.+.+++.||++++
T Consensus 153 ---~~~---~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~ 226 (463)
T 2r9z_A 153 ---GIT---SDGFFALQQQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHL 226 (463)
T ss_dssp ---SBC---HHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEES
T ss_pred ---eec---HHHHhhhhccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEe
Confidence 222 23333333457999999999999999999999999987 346778899999999
Q ss_pred CCeEEEEEeCCCCcEEEEEcCCCC-EEeCCEEEEccCCccCCch--hhhcCCccc-CCCEEeCCCCCCCCCceEEecccc
Q 012165 250 GASIKNLEAGSDGRVAAVKLEDGS-TIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVA 325 (469)
Q Consensus 250 ~~~v~~i~~~~~~~v~~v~~~~g~-~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~Vd~~~~t~~~~Vfa~GD~a 325 (469)
++.+++++.++++ ..+.+++|+ ++++|.||+|+|++|++++ ++++|++.+ +|+|.||+++||+.|+|||+|||+
T Consensus 227 ~~~v~~i~~~~~~--~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~ 304 (463)
T 2r9z_A 227 EFAVAALERDAQG--TTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAYQNTNVPGVYALGDIT 304 (463)
T ss_dssp SCCEEEEEEETTE--EEEEETTCCEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCCTTSBCSSTTEEECGGGG
T ss_pred CCEEEEEEEeCCe--EEEEEeCCcEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECCCCccCCCCEEEEeecC
Confidence 9999999864333 367888998 8999999999999999874 577888876 677999999999999999999998
Q ss_pred ccCCccCCcccccchHHHHHHHHHHHHHHHhcCCC---CCCCCCCceeeecccccCCCcceeeEEeecCCC--------c
Q 012165 326 AFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT---HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG--------E 394 (469)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~---~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~--------~ 394 (469)
..+. .+..|..+|+.+|.||++... ..|..+|+. .|..+. +..+|.... +
T Consensus 305 ~~~~----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~---~~~~~~------~a~vGl~e~~a~~~~g~~ 365 (463)
T 2r9z_A 305 GRDQ----------LTPVAIAAGRRLAERLFDGQSERKLDYDNIPTV---VFAHPP------LSKVGLSEPEARERLGDV 365 (463)
T ss_dssp TSCC----------CHHHHHHHHHHHHHHHHSCCTTCCCCCSSCCEE---ECCSSC------EEEEECCHHHHHHHHCSC
T ss_pred CCcc----------cHHHHHHHHHHHHHHHcCCCCcccCCCCCCCEE---EeCCCC------eEEEcCCHHHHHhcCCCC
Confidence 6432 456699999999999997542 345566652 232221 444553311 1
Q ss_pred EEEE------------ccCCCcEEEEEEe--CCEEEEEEeecCChHHhHH-HHHHHhCCCCCCh--hhhcCCCcHHHHHH
Q 012165 395 TIEI------------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQL-LPTLARSQPFVDK--AKLQQASSVEEALE 457 (469)
Q Consensus 395 ~~~~------------~~~~~~~~~~~~~--~~~l~g~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 457 (469)
+... ......|.|++++ +++|+|+++++.++.++.. +..+++.+.+++. ..++.||+++|+++
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~ 445 (463)
T 2r9z_A 366 LTVYETSFTPMRYALNEHGPKTAMKLVCAGPEQRVVGVHVIGDGADEMLQGFAVAVKMGATKADFDNTVAIHPGSAEELV 445 (463)
T ss_dssp EEEEEEEECCGGGTTSSSCCCEEEEEEEETTTTEEEEEEEESTTGGGTSHHHHHHHHTTCBHHHHHTSCCCSSSSGGGGG
T ss_pred EEEEEEEcccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHHHHH
Confidence 1110 1112347788775 6999999987776766444 4455778777662 23578999999987
Q ss_pred HHH
Q 012165 458 IAR 460 (469)
Q Consensus 458 ~~~ 460 (469)
.++
T Consensus 446 ~~~ 448 (463)
T 2r9z_A 446 TLK 448 (463)
T ss_dssp CCC
T ss_pred HHH
Confidence 654
No 40
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=3.2e-38 Score=320.77 Aligned_cols=380 Identities=20% Similarity=0.252 Sum_probs=254.3
Q ss_pred CcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC---CCC-cccccC----------CCC-----CCCCCCC
Q 012165 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER---PAL-TKGYLF----------PLD-----KKPARLP 112 (469)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~---~~l-~~~~~~----------~~~-----~~~~~~~ 112 (469)
+||+|||||+||+++|..|++.|. +|+|||+++.++... ... ++.++. ... ....++.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~---~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~ 78 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGM---KVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLP 78 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCC---eEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHH
Confidence 699999999999999999999987 799999986542110 000 000000 000 0000000
Q ss_pred CCcccc---CCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeC-CCeEEEeccEEeccCCCCCcCCCCCCCCcCcE
Q 012165 113 GFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITN-SGKLLKYGSLIVATGCTASRFPEKIGGYLPGV 188 (469)
Q Consensus 113 ~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~-~g~~~~yd~lVlAtG~~~~~~~~~~g~~~~~v 188 (469)
.+.... .........+++++.+++++.+. +..++. +.+.+. +|.++.||+||+|||++|.. |++++.+.+++
T Consensus 79 ~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~-~~~i~~--~~~~v~~~g~~~~~d~lviAtG~~p~~-~~~~g~~~~~v 154 (455)
T 2yqu_A 79 ALMAHKDKVVQANTQGVEFLFKKNGIARHQGT-ARFLSE--RKVLVEETGEELEARYILIATGSAPLI-PPWAQVDYERV 154 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEESC-EEESSS--SEEEETTTCCEEEEEEEEECCCEEECC-CTTBCCCSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEecC--CeEEEeeCCEEEEecEEEECCCCCCCC-CCCCCCCcCcE
Confidence 000000 00000001245567799999874 444554 344443 56789999999999999874 44555433344
Q ss_pred EEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe------------------eeHHHHHHcCcEEEcC
Q 012165 189 HYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------------RYEQLYQQNGVKFVKG 250 (469)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------------~~~~~l~~~gV~~~~~ 250 (469)
.+ ...+......+++++|||+|++|+|+|..|+++|.+++ .+.+.+++.||+++++
T Consensus 155 ~~------~~~~~~~~~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~ 228 (455)
T 2yqu_A 155 VT------STEALSFPEVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTG 228 (455)
T ss_dssp EC------HHHHTCCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECS
T ss_pred ec------hHHhhccccCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccccCHHHHHHHHHHHHHCCCEEEEC
Confidence 32 22222222357999999999999999999999999987 3467788899999999
Q ss_pred CeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCch--hhhcCCccc-CCCEEeCCCCCCCCCceEEecccccc
Q 012165 251 ASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAF 327 (469)
Q Consensus 251 ~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~Vd~~~~t~~~~Vfa~GD~a~~ 327 (469)
+++++++.++ +.+ .+.+++|+++++|.||+|+|.+|++++ ++.+|+..+ +|+|.||+++||+.|+|||+|||+..
T Consensus 229 ~~V~~i~~~~-~~v-~v~~~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~~~~t~~~~iya~GD~~~~ 306 (455)
T 2yqu_A 229 VRVTAVVPEA-KGA-RVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHLRTRVPHIYAIGDVVRG 306 (455)
T ss_dssp CCEEEEEEET-TEE-EEEETTSCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCTTSBCSSTTEEECGGGSSS
T ss_pred CEEEEEEEeC-CEE-EEEECCCeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeECCCcccCCCCEEEEecCCCC
Confidence 9999998643 333 567778889999999999999999887 678888875 47799999999999999999999975
Q ss_pred CCccCCcccccchHHHHHHHHHHHHHHHhcCCCCCC--CCCCceeeecccccCCCcceeeEEeecCCC-------cEEEE
Q 012165 328 PLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTY--DYLPYFYSRVFEYEGSPRKVWWQFFGDNVG-------ETIEI 398 (469)
Q Consensus 328 ~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~~~~--~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~-------~~~~~ 398 (469)
+. .+..|..+|+.+|++|++. ..++ ..+|+ ...++.+ +..+|.... +....
T Consensus 307 ~~----------~~~~A~~~g~~aa~~i~~~-~~~~~~~~~p~--~~~~~~~-------~a~~G~~~~~a~~~g~~~~~~ 366 (455)
T 2yqu_A 307 PM----------LAHKASEEGIAAVEHMVRG-FGHVDYQAIPS--VVYTHPE-------IAAVGYTEEELKAQGIPYKVG 366 (455)
T ss_dssp CC----------CHHHHHHHHHHHHHHHHHS-CCCCCGGGCCE--EECSSSE-------EEEEECCHHHHHHHTCCEEEE
T ss_pred cc----------CHHHHHHhHHHHHHHHcCC-CccCCCCCCCE--EEEcCCc-------eEEEECCHHHHHHcCCCEEEE
Confidence 42 3456999999999999974 3333 33453 2222211 344453321 11110
Q ss_pred ------------ccCCCcEEEEEEe--CCEEEEEEeecCChHH-hHHHHHHHhCCCCCCh--hhhcCCCcHHHHHHHHHh
Q 012165 399 ------------GNFDPKIATFWID--SGKLKGVLVESGSPEE-FQLLPTLARSQPFVDK--AKLQQASSVEEALEIARA 461 (469)
Q Consensus 399 ------------~~~~~~~~~~~~~--~~~l~g~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 461 (469)
......|.+++++ +++|+|+++++..+.+ +..+..+++.+.+++. .....||++.|+++.|++
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~~~~~~~~~Pt~~e~~~~~~~ 446 (455)
T 2yqu_A 367 KFPYSASGRARAMGETEGFIKVLAHAKTDRILGVHGIGARVGDVLAEAALALFFKASAEDLGRAPHAHPSLSEILKEAAL 446 (455)
T ss_dssp EEEGGGCHHHHHHTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCTHHHHHHHHH
T ss_pred EEEcccchHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHHH
Confidence 0112347788885 7999999986666654 4445566788888763 235788999999999987
Q ss_pred cCCcc
Q 012165 462 ALPVE 466 (469)
Q Consensus 462 ~~~~~ 466 (469)
++..+
T Consensus 447 ~~~~~ 451 (455)
T 2yqu_A 447 AAWER 451 (455)
T ss_dssp HHHSC
T ss_pred HHhcC
Confidence 65443
No 41
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.4e-39 Score=327.86 Aligned_cols=377 Identities=16% Similarity=0.205 Sum_probs=251.4
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC---CCCC-ccccc-----------------CCC--CC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE---RPAL-TKGYL-----------------FPL--DK 106 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~---~~~l-~~~~~-----------------~~~--~~ 106 (469)
.++||+|||||+||++||.+|++.|. +|+|||++. .+.. .... ++.++ .+. ..
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~---~V~lie~~~-~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~ 79 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGI---PTVLVEGQA-LGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVAS 79 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTC---CEEEECSSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC---EEEEEccCC-CCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCC
Confidence 35899999999999999999999987 799999943 2100 0000 00000 000 00
Q ss_pred CCCCCCCCcccc---CCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCCcCCCCCCC
Q 012165 107 KPARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGG 183 (469)
Q Consensus 107 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~ 183 (469)
...++..+.... .........+++++.+++++.+..+ .++ .++|.+++ .++.||+||||||++|+.+|.++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~-~~~--~~~v~v~~-~~~~~d~lviATGs~p~~~~~~~~- 154 (458)
T 1lvl_A 80 PRLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAK-VLD--GKQVEVDG-QRIQCEHLLLATGSSSVELPMLPL- 154 (458)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEE-EEE--TTEEEETT-EEEECSEEEECCCEEECCBTTBCC-
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEE-Ecc--CCEEEEee-EEEEeCEEEEeCCCCCCCCCCCCc-
Confidence 000000000000 0000000124567889999997544 455 46788876 779999999999999875443332
Q ss_pred CcCcEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe------------------eeHHHHHHcCc
Q 012165 184 YLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------------RYEQLYQQNGV 245 (469)
Q Consensus 184 ~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------------~~~~~l~~~gV 245 (469)
+ ..+. +.. ........+++++|||+|++|+|+|..|+++|.+|+ .+.+.+++.||
T Consensus 155 ~-~~v~---~~~---~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv 227 (458)
T 1lvl_A 155 G-GPVI---SST---EALAPKALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPTYDSELTAPVAESLKKLGI 227 (458)
T ss_dssp B-TTEE---CHH---HHTCCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTC
T ss_pred c-CcEe---cHH---HHhhhhccCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCC
Confidence 1 1222 222 222222357999999999999999999999999988 34667888999
Q ss_pred EEEcCCeEEEEEeCCCCcEEEEEcCCC--CEEeCCEEEEccCCccCCch--hhhcCCcccCCCEEeCCCCCCCCCceEEe
Q 012165 246 KFVKGASIKNLEAGSDGRVAAVKLEDG--STIDADTIVIGIGAKPTVSP--FERVGLNSSVGGIQVDGQFRTRMPGIFAI 321 (469)
Q Consensus 246 ~~~~~~~v~~i~~~~~~~v~~v~~~~g--~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~~g~i~Vd~~~~t~~~~Vfa~ 321 (469)
++++++.+++++. + .+ .+...+| +++++|.||+|+|++|++++ ++.+|+..++++|.||+++||+.|+|||+
T Consensus 228 ~i~~~~~v~~i~~--~-~v-~v~~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~~i~vd~~~~t~~~~Iya~ 303 (458)
T 1lvl_A 228 ALHLGHSVEGYEN--G-CL-LANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGAAIAIDERCQTSMHNVWAI 303 (458)
T ss_dssp EEETTCEEEEEET--T-EE-EEECSSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETTEECCCTTCBCSSTTEEEC
T ss_pred EEEECCEEEEEEe--C-CE-EEEECCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCCEEeECCCCcCCCCCEEEe
Confidence 9999999999984 2 23 4554566 68999999999999999886 58888887633899999999999999999
Q ss_pred ccccccCCccCCcccccchHHHHHHHHHHHHHHHhcCCCCC--CCCCCceeeecccccCCCcceeeEEeecCCC------
Q 012165 322 GDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHT--YDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG------ 393 (469)
Q Consensus 322 GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~~~--~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~------ 393 (469)
|||+..+. .+..|..+|+.+|++|++. ..+ +..+|+ ...++.. +..+|....
T Consensus 304 GD~~~~~~----------~~~~A~~~g~~aa~~i~g~-~~~~~~~~~p~--~~~~~p~-------~a~vG~~e~~a~~~g 363 (458)
T 1lvl_A 304 GDVAGEPM----------LAHRAMAQGEMVAEIIAGK-ARRFEPAAIAA--VCFTDPE-------VVVVGKTPEQASQQG 363 (458)
T ss_dssp GGGGCSSC----------CHHHHHHHHHHHHHHHTTC-CCCCCCSCCCE--EECSSSE-------EEEEECCHHHHHHTT
T ss_pred eccCCCcc----------cHHHHHHHHHHHHHHhcCC-CccCCCCCCCE--EEECCCC-------eEEEeCCHHHHHHcC
Confidence 99998542 3456999999999999963 333 444553 2222211 334443211
Q ss_pred -cEEEE------------ccCCCcEEEEEEe--CCEEEEEEeecCChHH-hHHHHHHHhCCCCCCh--hhhcCCCcHHHH
Q 012165 394 -ETIEI------------GNFDPKIATFWID--SGKLKGVLVESGSPEE-FQLLPTLARSQPFVDK--AKLQQASSVEEA 455 (469)
Q Consensus 394 -~~~~~------------~~~~~~~~~~~~~--~~~l~g~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 455 (469)
+.... ......|.|++++ +++|+|+++++..+.+ +..+..+|+.+.+++. ..+..||++.|+
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~g~~kl~~d~~~~~ilG~~~vg~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~ 443 (458)
T 1lvl_A 364 LDCIVAQFPFAANGRAMSLESKSGFVRVVARRDNHLILGWQAVGVAVSELSTAFAQSLEMGACLEDVAGTIHAHPTLGEA 443 (458)
T ss_dssp CCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTGGGHHHHHHHHHHHTCBHHHHHTSCCCTTCTTHH
T ss_pred CCEEEEEEECccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCCHHHH
Confidence 11110 0112347888884 6999999987666644 5555667888887763 224779999999
Q ss_pred HHHHHhcCCcc
Q 012165 456 LEIARAALPVE 466 (469)
Q Consensus 456 ~~~~~~~~~~~ 466 (469)
++.|++++..+
T Consensus 444 ~~~a~~~~~~~ 454 (458)
T 1lvl_A 444 VQEAALRALGH 454 (458)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHhcc
Confidence 99998776544
No 42
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.1e-39 Score=332.23 Aligned_cols=378 Identities=20% Similarity=0.258 Sum_probs=258.8
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC---CCCCc-c----------------cccCCCCCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE---RPALT-K----------------GYLFPLDKKPA 109 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~---~~~l~-~----------------~~~~~~~~~~~ 109 (469)
.++||+|||||++|+++|..|++.|+ +|+|||+.. .+.. ....+ + .+.........
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~---~V~liEk~~-~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~ 79 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGK---KVAIAEEFR-YGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRF 79 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTC---CEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEE
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC---EEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCc
Confidence 45899999999999999999999987 799999943 2110 00000 0 00000000000
Q ss_pred CCCCCcccc---CCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEe-CCCeEEEeccEEeccCCCCCcCCCCCCCCc
Q 012165 110 RLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLIT-NSGKLLKYGSLIVATGCTASRFPEKIGGYL 185 (469)
Q Consensus 110 ~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~-~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~ 185 (469)
+++.+.... ..........++++.+++++.+ ++..++ .+++.+ .+++.+.||+||+|||++|...|.++|.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~--~~~v~~~~~~~~~~~d~lviAtG~~p~~~p~i~G~~- 155 (463)
T 4dna_A 80 DWAKLVAAKEQEIARLEGLYRKGLANAGAEILDT-RAELAG--PNTVKLLASGKTVTAERIVIAVGGHPSPHDALPGHE- 155 (463)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEES-CEEESS--SSEEEETTTTEEEEEEEEEECCCEEECCCTTSTTGG-
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEee--CCEEEEecCCeEEEeCEEEEecCCCcccCCCCCCcc-
Confidence 000000000 0000001223455679999986 666655 467777 57788999999999999886245545532
Q ss_pred CcEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe------------------eeHHHHHHcCcEE
Q 012165 186 PGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------------RYEQLYQQNGVKF 247 (469)
Q Consensus 186 ~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------------~~~~~l~~~gV~~ 247 (469)
...+ .+.+......+++++|||+|++|+|+|..+.++|.+++ .+.+.+++.||++
T Consensus 156 ----~~~~---~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i 228 (463)
T 4dna_A 156 ----LCIT---SNEAFDLPALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRI 228 (463)
T ss_dssp ----GCBC---HHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEE
T ss_pred ----cccc---HHHHhhhhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEE
Confidence 2222 33333333468999999999999999999999999887 4456788999999
Q ss_pred EcCCeEEEEEeCCCCcEEEEE-cCCCCEEeCCEEEEccCCccCCch--hhhcCCccc-CCCEEeCCCCCCCCCceEEecc
Q 012165 248 VKGASIKNLEAGSDGRVAAVK-LEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGD 323 (469)
Q Consensus 248 ~~~~~v~~i~~~~~~~v~~v~-~~~g~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~Vd~~~~t~~~~Vfa~GD 323 (469)
++++.|++++.++++.+ .|. +++|+ +++|.||+|+|++|++.+ ++.+|++.+ +|+|.||+++||++|+|||+||
T Consensus 229 ~~~~~v~~i~~~~~~~~-~v~~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~iya~GD 306 (463)
T 4dna_A 229 LCEDIIQSVSADADGRR-VATTMKHGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAFSRTSTPGIYALGD 306 (463)
T ss_dssp ECSCCEEEEEECTTSCE-EEEESSSCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCTTCBCSSTTEEECSG
T ss_pred ECCCEEEEEEEcCCCEE-EEEEcCCCe-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeECcCCCCCCCCEEEEEe
Confidence 99999999987545543 678 88997 999999999999999987 788899876 5789999999999999999999
Q ss_pred ccccCCccCCcccccchHHHHHHHHHHHHHHHhcCCCC--CCCCCCceeeecccccCCCcceeeEEeecCCCc-------
Q 012165 324 VAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE------- 394 (469)
Q Consensus 324 ~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~~--~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~~------- 394 (469)
|+..+. .+..|..+|+.+|+||++.... .+..+|+ ..|..+. +..+|.++.+
T Consensus 307 ~~~~~~----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~---~~~~~p~------~a~vG~te~~a~~~~~~ 367 (463)
T 4dna_A 307 VTDRVQ----------LTPVAIHEAMCFIETEYKNNPTSPDHDLIAT---AVFSQPE------IGTVGITEEEAARKFQE 367 (463)
T ss_dssp GGSSCC----------CHHHHHHHHHHHHHHHHSSCCCCCCCSCCCE---EECSSSC------EEEEECCHHHHHHHSSE
T ss_pred cCCCCC----------ChHHHHHHHHHHHHHHcCCCCcccCCCCCCE---EEECCCC------eEEecCCHHHHHHcCCC
Confidence 998432 4456999999999999975433 3455564 3343221 5556654321
Q ss_pred EEE-Ec---c--------CCCcEEEEEEe--CCEEEEEEeecCChHHhHH-HHHHHhCCCCCCh--hhhcCCCcHHHHHH
Q 012165 395 TIE-IG---N--------FDPKIATFWID--SGKLKGVLVESGSPEEFQL-LPTLARSQPFVDK--AKLQQASSVEEALE 457 (469)
Q Consensus 395 ~~~-~~---~--------~~~~~~~~~~~--~~~l~g~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 457 (469)
... .. . ....+.|+.++ +++|+|+++++.++.++.. +..+|+.+.+++. ..++.|||+.|+++
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~ 447 (463)
T 4dna_A 368 IEVYRAEFRPMKATLSGRKEKTIMKLVVNAADRKVVGAHILGHDAGEMAQLLGISLRAGCTKDDFDRTMAVHPTAAEELV 447 (463)
T ss_dssp EEEEEEEECCTTHHHHCCCCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCSGGGGT
T ss_pred eEEEEEeccccchhhcCCCceEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHH
Confidence 111 10 0 11236777775 5999999998877766554 4556788887763 33578999999999
Q ss_pred HHHhcC
Q 012165 458 IARAAL 463 (469)
Q Consensus 458 ~~~~~~ 463 (469)
+++...
T Consensus 448 ~~~~~~ 453 (463)
T 4dna_A 448 TMYQPS 453 (463)
T ss_dssp CCCSCS
T ss_pred HHhhhc
Confidence 887543
No 43
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=3.4e-39 Score=329.97 Aligned_cols=378 Identities=20% Similarity=0.221 Sum_probs=254.1
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC--CC---CC--------C------cccccCCCCCCCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY--ER---PA--------L------TKGYLFPLDKKPA 109 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~--~~---~~--------l------~~~~~~~~~~~~~ 109 (469)
+.++||+|||||+||+++|..|++.|+ +|+|||++...+- .. |. . ...+.........
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~---~V~liE~~~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~ 94 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGA---RAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKF 94 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCC---eEEEEecCCCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCcc
Confidence 446899999999999999999999987 7999997742100 00 00 0 0000000000000
Q ss_pred CCCCCcccc---CCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCCcCC--CCCCCC
Q 012165 110 RLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFP--EKIGGY 184 (469)
Q Consensus 110 ~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~~~~--~~~g~~ 184 (469)
++..+.... ...........++..+++++.+ ++..++.....|. .+++++.||+||||||++|..++ .++|..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~~~~~~~~v~-~~g~~~~~d~lviAtG~~p~~p~~~~i~G~~ 172 (478)
T 3dk9_A 95 NWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRG-HAAFTSDPKPTIE-VSGKKYTAPHILIATGGMPSTPHESQIPGAS 172 (478)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEECSCSSCEEE-ETTEEEECSCEEECCCEEECCCCTTTSTTGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEeeCCeEEEE-ECCEEEEeeEEEEccCCCCCCCCcCCCCCCc
Confidence 000000000 0000001122345679999986 6777777777777 46677999999999999987431 444432
Q ss_pred cCcEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe------------------eeHHHHHHcCcE
Q 012165 185 LPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------------RYEQLYQQNGVK 246 (469)
Q Consensus 185 ~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------------~~~~~l~~~gV~ 246 (469)
... +.+.+......+++++|||+|++|+|+|..|+++|.+|+ .+.+.+++.||+
T Consensus 173 -----~~~---~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~gv~ 244 (478)
T 3dk9_A 173 -----LGI---TSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVE 244 (478)
T ss_dssp -----GSB---CHHHHTTCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCE
T ss_pred -----eeE---chHHhhchhhcCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccccCHHHHHHHHHHHHHCCCE
Confidence 122 233443334457999999999999999999999999988 356778899999
Q ss_pred EEcCCeEEEEEeCCCCcEEEEEcCC---C----CEEeCCEEEEccCCccCCc-h-hhhcCCccc-CCCEEeCCCCCCCCC
Q 012165 247 FVKGASIKNLEAGSDGRVAAVKLED---G----STIDADTIVIGIGAKPTVS-P-FERVGLNSS-VGGIQVDGQFRTRMP 316 (469)
Q Consensus 247 ~~~~~~v~~i~~~~~~~v~~v~~~~---g----~~i~~D~vi~a~G~~p~~~-~-~~~~gl~~~-~g~i~Vd~~~~t~~~ 316 (469)
+++++.+++++..+++....+.+.+ | +++++|.||+|+|++|+++ + ++.+|++.+ +|+|.||+++||++|
T Consensus 245 i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~ 324 (478)
T 3dk9_A 245 VLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVK 324 (478)
T ss_dssp EETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCTTCBCSST
T ss_pred EEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCCCcccCCC
Confidence 9999999999875555233566765 2 5799999999999999987 4 788898875 678999999999999
Q ss_pred ceEEeccccccCCccCCcccccchHHHHHHHHHHHHHHHhcCC-C--CCCCCCCceeeecccccCCCcceeeEEeecCCC
Q 012165 317 GIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQ-T--HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG 393 (469)
Q Consensus 317 ~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~-~--~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~ 393 (469)
+|||+|||+..+. .+..|..+|+.+|++|++.. . ..|..+|+ ..|..+. +..+|.++.
T Consensus 325 ~IyA~GD~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~---~~~~~p~------~a~vGlte~ 385 (478)
T 3dk9_A 325 GIYAVGDVCGKAL----------LTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPT---VVFSHPP------IGTVGLTED 385 (478)
T ss_dssp TEEECGGGGCSSC----------CHHHHHHHHHHHHHHHHSCCTTCCCCCTTCCE---EECCSSC------EEEEECCHH
T ss_pred CEEEEEecCCCCc----------cHhHHHHHHHHHHHHHcCCCCcccCCCCCCCe---EEECCCc------eEEeeCCHH
Confidence 9999999996443 34568999999999999752 2 34556664 3343221 455565432
Q ss_pred c---------EEEE----c--------cCCCcEEEEEEe--CCEEEEEEeecCChHHhHH-HHHHHhCCCCCCh--hhhc
Q 012165 394 E---------TIEI----G--------NFDPKIATFWID--SGKLKGVLVESGSPEEFQL-LPTLARSQPFVDK--AKLQ 447 (469)
Q Consensus 394 ~---------~~~~----~--------~~~~~~~~~~~~--~~~l~g~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~ 447 (469)
+ .... . +....+.|++++ +++|+|+++++.++.++.. +..+|+.+.+++. ..++
T Consensus 386 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~ 465 (478)
T 3dk9_A 386 EAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVA 465 (478)
T ss_dssp HHHHHHCGGGEEEEEEEECCGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCC
T ss_pred HHHhhCCCccEEEEEeecCcchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhccc
Confidence 1 1110 0 011237777764 5999999998777766554 4556788887762 3357
Q ss_pred CCCcHHHHHHH
Q 012165 448 QASSVEEALEI 458 (469)
Q Consensus 448 ~~~~~~~~~~~ 458 (469)
.|||+.|++..
T Consensus 466 ~hPt~~e~~~~ 476 (478)
T 3dk9_A 466 IHPTSSEELVT 476 (478)
T ss_dssp CSSSSGGGGGS
T ss_pred CCCChHHHHHh
Confidence 89999998864
No 44
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=100.00 E-value=3.9e-40 Score=332.86 Aligned_cols=317 Identities=19% Similarity=0.169 Sum_probs=228.2
Q ss_pred cccccccccccccccc--CCCCcccccc---cCCccccccccccc------ccc---cCCCCCCcEEEEcCcHHHHHHHH
Q 012165 3 SVSNSLSFKHGLSLWC--PQSPSLHRIR---HSSAKNFQRRGFVV------AYS---SFANENREFVIVGGGNAAGYAAR 68 (469)
Q Consensus 3 ~~~~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~~------~~~---~~~~~~~~vvIIGgG~AGl~aA~ 68 (469)
.++||||.+|||+|++ +|+..|.+.. .++++..++++..+ +.+ +.....++|+|||||+||+++|.
T Consensus 60 ~~~n~~p~~~grvCp~~~~Ce~~C~~~~~~~~~v~I~~le~~~~~~~~~~~~~~~~~~~~~~~~~V~IIGgGpAGl~aA~ 139 (456)
T 2vdc_G 60 QATNNFPEICGRICPQDRLCEGNCVIEQSTHGAVTIGSVEKYINDTAWDQGWVKPRTPSRELGLSVGVIGAGPAGLAAAE 139 (456)
T ss_dssp HHHCSCHHHHHHHCCGGGSGGGGCGGGGSSSCSCCHHHHHHHHHHHHHHHTCCCCCCSCSSCCCCEEEECCSHHHHHHHH
T ss_pred HhhCCCCccccccCCCCcchHHhcccCCCCCCCccHHHHHHHHHHHHHHcCCCCCCCCcCCCCCEEEEECCCHHHHHHHH
Confidence 4689999999999999 9999999874 67888877776532 111 22345789999999999999999
Q ss_pred HHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHHHHCCcEEEeCCcEEEEeC
Q 012165 69 TFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDI 148 (469)
Q Consensus 69 ~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~id~ 148 (469)
.|++.|+ +|+|+|+.+.++.. +. +-.+. .+++. ....+..+++++.+++++.++.+.
T Consensus 140 ~L~~~G~---~V~v~e~~~~~GG~---l~--~gip~----~~~~~-------~~~~~~~~~l~~~gv~~~~~~~v~---- 196 (456)
T 2vdc_G 140 ELRAKGY---EVHVYDRYDRMGGL---LV--YGIPG----FKLEK-------SVVERRVKLLADAGVIYHPNFEVG---- 196 (456)
T ss_dssp HHHHHTC---CEEEECSSSSCSTH---HH--HTSCT----TTSCH-------HHHHHHHHHHHHTTCEEETTCCBT----
T ss_pred HHHHCCC---eEEEEeccCCCCCe---ee--ecCCC----ccCCH-------HHHHHHHHHHHHCCcEEEeCCEec----
Confidence 9999998 79999998764311 00 10110 01110 001233467788999999986542
Q ss_pred CCcEEEeCCCeEEEeccEEeccCCCCCcCCCCCCCCcCcEEEecCHHHHHHHH--H----------hhhcCCeEEEEcCC
Q 012165 149 EKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALI--S----------SLEKAKKVVVVGGG 216 (469)
Q Consensus 149 ~~~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~--~----------~~~~~~~vvVvG~G 216 (469)
+.++++++. +.||+||||||+.+...+.++|.+.+++++..++....... . ....+++|+|||+|
T Consensus 197 --~~v~~~~~~-~~~d~vvlAtG~~~~~~~~ipG~~~~gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG 273 (456)
T 2vdc_G 197 --RDASLPELR-RKHVAVLVATGVYKARDIKAPGSGLGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGG 273 (456)
T ss_dssp --TTBCHHHHH-SSCSEEEECCCCCEECCTTCSCCTTTTEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSS
T ss_pred --cEEEhhHhH-hhCCEEEEecCCCCCCCCCCCCCcCCCcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCC
Confidence 223333332 57999999999974335667887788887654333222111 0 01357899999999
Q ss_pred hHHHHHHHHHHhCCCe-Ee--------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEc---------C--
Q 012165 217 YIGMEVAAAAVGWKLD-TT--------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL---------E-- 270 (469)
Q Consensus 217 ~~g~e~A~~l~~~g~~-v~--------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~---------~-- 270 (469)
.+|+|+|..+.++|.+ |+ .-.+.+++.||++++++.+.++.. ++++.++++ .
T Consensus 274 ~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~~~~e~~~~~~~Gv~~~~~~~~~~i~~--~g~v~~v~~~~~~~~~~d~~G 351 (456)
T 2vdc_G 274 DTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQREVAHAEEEGVEFIWQAAPEGFTG--DTVVTGVRAVRIHLGVADATG 351 (456)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECSSCSTTCSSCHHHHHHHHHTTCEEECCSSSCCEEE--EEEEETTEEEEEEEEEEEECT
T ss_pred hhHHHHHHHHHHcCCCEEEEEEeCCccCCCCCHHHHHHHHHCCCEEEeCCCceEEeC--CCcEEEEEEEEEEecccCCcC
Confidence 9999999999999874 76 113457789999999999988874 343322222 1
Q ss_pred -------CC--CEEeCCEEEEccCCccCCc--hhhhcCCccc-CCCEEeCCC-CCCCCCceEEeccccccCCccCCcccc
Q 012165 271 -------DG--STIDADTIVIGIGAKPTVS--PFERVGLNSS-VGGIQVDGQ-FRTRMPGIFAIGDVAAFPLKMYDRTAR 337 (469)
Q Consensus 271 -------~g--~~i~~D~vi~a~G~~p~~~--~~~~~gl~~~-~g~i~Vd~~-~~t~~~~Vfa~GD~a~~~~~~~~~~~~ 337 (469)
+| +++++|.||+|+|+.|++. ++++++++.+ +|+|.||++ ++|+.|+|||+|||+..+.
T Consensus 352 ~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl~~~~~G~i~vd~~~~~Ts~~~VfA~GD~~~g~~-------- 423 (456)
T 2vdc_G 352 RQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPELKVTRWGTLLVDHRTKMTNMDGVFAAGDIVRGAS-------- 423 (456)
T ss_dssp TCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHSTTSCBCTTSSBCCCTTTCBCSSTTEEECGGGGSSCC--------
T ss_pred CccccccCCcEEEEECCEEEECCCCCCCcchhhcccCCeeECCCCCEEECCCCCcCCCCCEEEeccccCCch--------
Confidence 23 4799999999999999876 7888888875 688999997 9999999999999997643
Q ss_pred cchHHHHHHHHHHHHHHHhc
Q 012165 338 VEHVDHARQSAQHCIKALLS 357 (469)
Q Consensus 338 ~~~~~~A~~~a~~~a~~i~~ 357 (469)
.+..|+.+|+.+|.+|..
T Consensus 424 --~v~~A~~~G~~aA~~i~~ 441 (456)
T 2vdc_G 424 --LVVWAIRDGRDAAEGIHA 441 (456)
T ss_dssp --SHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHH
Confidence 455688899999988864
No 45
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=2.4e-39 Score=331.50 Aligned_cols=381 Identities=20% Similarity=0.245 Sum_probs=255.2
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCC-------CCCCC-----Cc-c----------------c
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP-------YERPA-----LT-K----------------G 99 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~-------~~~~~-----l~-~----------------~ 99 (469)
+..+||+|||||+||++||..|++.|+ +|+|||+....+ +--.. .+ + .
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~---~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~ 83 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGA---RVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAA 83 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTC---CEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCC---EEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHh
Confidence 456899999999999999999999987 799999522110 00000 00 0 0
Q ss_pred ccCCCCC-CCCCCCCCccccC---CCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCe-EEEeccEEeccCCCC
Q 012165 100 YLFPLDK-KPARLPGFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGK-LLKYGSLIVATGCTA 174 (469)
Q Consensus 100 ~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~-~~~yd~lVlAtG~~~ 174 (469)
+-..... ...++..+..... ..........++..+++++.+ .+..++.....|.+.+|. ++.||+||||||++|
T Consensus 84 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~a~~~~~~~v~v~~~~g~~~~~~d~lviATGs~p 162 (483)
T 3dgh_A 84 YGWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYING-LGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRP 162 (483)
T ss_dssp TTBCCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEETTEEEEECTTCCEEEEEEEEEECCCEEE
T ss_pred cCcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEccCCEEEEEeCCCeEEEEcCEEEEeCCCCc
Confidence 0000000 0000000000000 000000112345679998875 667777766677777774 799999999999998
Q ss_pred CcCCCCCCCCcCcEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe-----------------eeH
Q 012165 175 SRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT-----------------RYE 237 (469)
Q Consensus 175 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~-----------------~~~ 237 (469)
+ .|.++|.+... .+ ++.+......+++++|||+|++|+|+|..|.++|.+|+ .+.
T Consensus 163 ~-~p~i~G~~~~~----~~---~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~~~d~~~~~~l~ 234 (483)
T 3dgh_A 163 R-YPDIPGAVEYG----IT---SDDLFSLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLRGFDQQMAELVA 234 (483)
T ss_dssp C-CCSSTTHHHHC----BC---HHHHTTCSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSSTTSCHHHHHHHH
T ss_pred C-CCCCCCccccc----Cc---HHHHhhhhhcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCcccCHHHHHHHH
Confidence 7 45555532111 12 33333333467899999999999999999999999987 346
Q ss_pred HHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCC-----EEeCCEEEEccCCccCCchh--hhcCCcccCCCEEeCCC
Q 012165 238 QLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS-----TIDADTIVIGIGAKPTVSPF--ERVGLNSSVGGIQVDGQ 310 (469)
Q Consensus 238 ~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~-----~i~~D~vi~a~G~~p~~~~~--~~~gl~~~~g~i~Vd~~ 310 (469)
+.+++.||++++++.+.+++..+++.+ .+.+.++. ++++|.||+|+|++|+++++ +.+|++.+.|+|.||++
T Consensus 235 ~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~G~i~vd~~ 313 (483)
T 3dgh_A 235 ASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKDKIPVDSQ 313 (483)
T ss_dssp HHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBTTBBCCCTT
T ss_pred HHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccccCCEEEECcC
Confidence 778899999999999999986545544 46666553 79999999999999999886 88888887788999999
Q ss_pred CCCCCCceEEeccccccCCccCCcccccchHHHHHHHHHHHHHHHhcCCCC--CCCCCCceeeecccccCCCcceeeEEe
Q 012165 311 FRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRKVWWQFF 388 (469)
Q Consensus 311 ~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~~--~~~~~p~~~~~~~~~~g~~~~~~~~~~ 388 (469)
+||+.|+|||+|||+.... ..+..|..+|+.+|+||++.... .|..+|+. .|..+ .+..+
T Consensus 314 ~~t~~~~IyA~GD~~~~~~---------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~---~~~~p------~~a~v 375 (483)
T 3dgh_A 314 EATNVANIYAVGDIIYGKP---------ELTPVAVLAGRLLARRLYGGSTQRMDYKDVATT---VFTPL------EYACV 375 (483)
T ss_dssp CBCSSTTEEECSTTBTTSC---------CCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEE---ECSSS------EEEEE
T ss_pred CccCCCCEEEEEcccCCCC---------ccHHHHHHHHHHHHHHHcCCCCCcCCCCCCCEE---EECCC------ccEEE
Confidence 9999999999999984211 14556999999999999975432 45566753 23221 14445
Q ss_pred ecCCC---------cEEE-Ec------------cCCCcEEEEEEe---CCEEEEEEeecCChHHhHH-HHHHHhCCCCCC
Q 012165 389 GDNVG---------ETIE-IG------------NFDPKIATFWID---SGKLKGVLVESGSPEEFQL-LPTLARSQPFVD 442 (469)
Q Consensus 389 G~~~~---------~~~~-~~------------~~~~~~~~~~~~---~~~l~g~~~~~~~~~~~~~-~~~~~~~~~~~~ 442 (469)
|.+.. .... .. .....|.|+.++ +++|+|+++++.++.++.. +..+|+.+.+++
T Consensus 376 Glte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~ 455 (483)
T 3dgh_A 376 GLSEEDAVKQFGADEIEVFHGYYKPTEFFIPQKSVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTIN 455 (483)
T ss_dssp ECCHHHHHHHHCGGGEEEEEEECCCGGGTTTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHH
T ss_pred eCCHHHHHhhCCCCCEEEEEEeecchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHH
Confidence 54421 0111 10 011237777764 4899999998887766554 455678888776
Q ss_pred h--hhhcCCCcHHHHHHHHH
Q 012165 443 K--AKLQQASSVEEALEIAR 460 (469)
Q Consensus 443 ~--~~~~~~~~~~~~~~~~~ 460 (469)
. ..++.|||++|++..+.
T Consensus 456 ~l~~~~~~hPt~~e~~~~~~ 475 (483)
T 3dgh_A 456 TLINTVGIHPTTAEEFTRLA 475 (483)
T ss_dssp HHHTSCCCSSCSGGGGGGCC
T ss_pred HHhhcccCCCChHHHHHHHH
Confidence 3 33578999999988755
No 46
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=2.9e-39 Score=331.60 Aligned_cols=382 Identities=18% Similarity=0.224 Sum_probs=239.1
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC-CCCC-----------cccccC----------CC----
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE-RPAL-----------TKGYLF----------PL---- 104 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~-~~~l-----------~~~~~~----------~~---- 104 (469)
.||++|||||+||++||.++++.|. +|+|||+.....+. +..+ +|.++. ..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~---kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~G 118 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGA---RVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYG 118 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTC---CEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGT
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC---eEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcC
Confidence 4899999999999999999999987 79999976532211 0001 111100 00
Q ss_pred ---CCCCCCCCCCccccC---CCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeC----CCeEEEeccEEeccCCCC
Q 012165 105 ---DKKPARLPGFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITN----SGKLLKYGSLIVATGCTA 174 (469)
Q Consensus 105 ---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~----~g~~~~yd~lVlAtG~~~ 174 (469)
.....+++.+..... ..........+++.+|+++.+ ...-+++..-.|... +++++.+|++|||||++|
T Consensus 119 i~~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G-~a~f~~~~~v~V~~~~~~~~~~~i~a~~iiIATGs~P 197 (542)
T 4b1b_A 119 WKFDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYING-LAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCRP 197 (542)
T ss_dssp EEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECE-EEEEEETTEEEEEEC--CCCEEEEEEEEEEECCCEEE
T ss_pred cccCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEee-eEEEcCCCcceEeecccCCceEEEeeeeEEeccCCCC
Confidence 000000000000000 000001123356789999876 555566544444333 345799999999999999
Q ss_pred CcCCCCCCCCcCcEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe-----------------eeH
Q 012165 175 SRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT-----------------RYE 237 (469)
Q Consensus 175 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~-----------------~~~ 237 (469)
..+|.+++. ...+ .+++.++.....+++++|||||++|+|+|..++++|.+|+ .+.
T Consensus 198 ~~P~~~~~~-~~~~------~ts~~~l~l~~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~~~D~ei~~~l~ 270 (542)
T 4b1b_A 198 HIPDDVEGA-KELS------ITSDDIFSLKKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLRGFDQQCAVKVK 270 (542)
T ss_dssp CCCSSSBTH-HHHC------BCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSSTTSCHHHHHHHH
T ss_pred CCCCcccCC-Cccc------cCchhhhccccCCceEEEECCCHHHHHHHHHHHhcCCeEEEecccccccccchhHHHHHH
Confidence 754432221 1111 1355555555678999999999999999999999999998 567
Q ss_pred HHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCch--hhhcCCccc-CCC-EEeCCCCCC
Q 012165 238 QLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGG-IQVDGQFRT 313 (469)
Q Consensus 238 ~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~-i~Vd~~~~t 313 (469)
+.|++.||+++++..+++++.. ++.+ .+.+.+++++.+|.|++|+|++||++. ++.+++..+ .++ +.||+++||
T Consensus 271 ~~l~~~gi~~~~~~~v~~~~~~-~~~~-~v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~T 348 (542)
T 4b1b_A 271 LYMEEQGVMFKNGILPKKLTKM-DDKI-LVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCT 348 (542)
T ss_dssp HHHHHTTCEEEETCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTTSBC
T ss_pred HHHHhhcceeecceEEEEEEec-CCeE-EEEEcCCCeEEEEEEEEcccccCCccccCcccceeeecccCceEeccccccc
Confidence 8899999999999999999865 3333 578889999999999999999999986 566777765 344 578899999
Q ss_pred CCCceEEecccccc-CCccCCcccccchHHHHHHHHHHHHHHHhcCCCC--CCCCCCceeeecccccCCCcceeeEEeec
Q 012165 314 RMPGIFAIGDVAAF-PLKMYDRTARVEHVDHARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRKVWWQFFGD 390 (469)
Q Consensus 314 ~~~~Vfa~GD~a~~-~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~~--~~~~~p~~~~~~~~~~g~~~~~~~~~~G~ 390 (469)
++|+|||+|||+.. |. ..| .|..+|+.++++|++.... .|..+|+ ..|..+- +..+|.
T Consensus 349 s~p~IyAiGDv~~~~p~--------La~--~A~~eg~~aa~~i~g~~~~~~d~~~iP~---~vft~Pe------iA~VGl 409 (542)
T 4b1b_A 349 NIPSIFAVGDVAENVPE--------LAP--VAIKAGEILARRLFKDSDEIMDYSYIPT---SIYTPIE------YGACGY 409 (542)
T ss_dssp SSTTEEECTTSBTTCCC--------CHH--HHHHHHHHHHHHHHSCCCCCCCCSSCCE---EECSSSC------EEEEEC
T ss_pred cCCCeEEeccccCCchh--------HHH--HHHHHHHHHHHHHhcCCCcccCCCCCce---EEeCCCC------eEEEeC
Confidence 99999999999964 22 223 4889999999999975543 4566775 3444332 444444
Q ss_pred CCCc---------E-EEE--------------------------ccCCCcEEEEEE-e--CCEEEEEEeecCChHHhHHH
Q 012165 391 NVGE---------T-IEI--------------------------GNFDPKIATFWI-D--SGKLKGVLVESGSPEEFQLL 431 (469)
Q Consensus 391 ~~~~---------~-~~~--------------------------~~~~~~~~~~~~-~--~~~l~g~~~~~~~~~~~~~~ 431 (469)
++.+ + +.. ......|.|+.. + +++|+|+++++.++.++...
T Consensus 410 TE~eA~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vKli~~~~~t~~ILGa~ivG~~A~ElI~~ 489 (542)
T 4b1b_A 410 SEEKAYELYGKSNVEVFLQEFNNLEISAVHRQKHIRAQKDEYDLDVSSTCLAKLVCLKNEDNRVIGFHYVGPNAGEVTQG 489 (542)
T ss_dssp CHHHHHHHHCTTTEEEEEC-----------------------------CCCEEEEEETTTTTBEEEEEEESTTHHHHHHH
T ss_pred CHHHHHHhCCCCcEEEEEeeccchhhhhhhhhhhhhcccccccccCCCceEEEEEEEeCCCCEEEEEEEECCCHHHHHHH
Confidence 3210 0 000 000123556553 3 58999999988888776655
Q ss_pred H-HHHhCCCCCCh--hhhcCCCcHHHHHHHHHhcCC
Q 012165 432 P-TLARSQPFVDK--AKLQQASSVEEALEIARAALP 464 (469)
Q Consensus 432 ~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 464 (469)
- -+|+.+.+++. ..++.|||++|+++++..++.
T Consensus 490 ~alAi~~~~t~~dl~~~i~~HPTlsE~l~~~~~t~~ 525 (542)
T 4b1b_A 490 MALALRLKVKKKDFDNCIGIHPTDAESFMNLFVTIS 525 (542)
T ss_dssp HHHHHHTCCBHHHHHHC-------------------
T ss_pred HHHHHHcCCCHHHHhccCCcCCCHHHHHHHHHHHHH
Confidence 4 45688877763 335789999999999987654
No 47
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=3.6e-38 Score=323.03 Aligned_cols=381 Identities=19% Similarity=0.231 Sum_probs=254.8
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC-CCCCccc----------cc---------------CC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE-RPALTKG----------YL---------------FP 103 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~-~~~l~~~----------~~---------------~~ 103 (469)
.++||+|||||+||++||..|++.|. +|+|||+.+..++. +..+-.. .+ ++
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~---~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g 81 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGK---KVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYG 81 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCC---eEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcC
Confidence 45899999999999999999999987 79999974322211 0000000 00 00
Q ss_pred CC---CCCCCCCCCcccc---CCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCC--eEEEeccEEeccCCCCC
Q 012165 104 LD---KKPARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTAS 175 (469)
Q Consensus 104 ~~---~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g--~~~~yd~lVlAtG~~~~ 175 (469)
.. ....++..+.... ...........++..+++++.+ .+..+++....|.+.+| .++.||+||||||++|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g-~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~ 160 (488)
T 3dgz_A 82 WEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNI-KASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPR 160 (488)
T ss_dssp CCCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECC-EEEESSSSEEEEECTTSCEEEEEEEEEEECCCEEEC
T ss_pred cccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEccCCeEEEEeCCCceEEEECCEEEEcCCCCCC
Confidence 00 0000000000000 0000000112345679998875 67777776667777777 47999999999999987
Q ss_pred cCCC-CCCCCcCcEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe-----------------eeH
Q 012165 176 RFPE-KIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT-----------------RYE 237 (469)
Q Consensus 176 ~~~~-~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~-----------------~~~ 237 (469)
. |. ++|.+.. . .+ ++.+......+++++|||+|++|+|+|..|+++|.+|+ .+.
T Consensus 161 ~-p~~i~G~~~~-~---~~---~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~~~d~~~~~~l~ 232 (488)
T 3dgz_A 161 Y-PTQVKGALEY-G---IT---SDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLRGFDQQMSSLVT 232 (488)
T ss_dssp C-CSSCBTHHHH-C---BC---HHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTTSCHHHHHHHH
T ss_pred C-CCCCCCcccc-c---Cc---HHHHHhhhhcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcccccCCHHHHHHHH
Confidence 4 54 5553211 1 12 33333333467899999999999999999999999987 456
Q ss_pred HHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCC---CC--EEeCCEEEEccCCccCCch--hhhcCCccc--CCCEEeC
Q 012165 238 QLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED---GS--TIDADTIVIGIGAKPTVSP--FERVGLNSS--VGGIQVD 308 (469)
Q Consensus 238 ~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~---g~--~i~~D~vi~a~G~~p~~~~--~~~~gl~~~--~g~i~Vd 308 (469)
+.+++.||++++++.+++++..+++.+ .+.+.+ |+ ++++|.||+++|++|++++ ++..++..+ +|+|.||
T Consensus 233 ~~l~~~gv~~~~~~~v~~i~~~~~~~~-~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd 311 (488)
T 3dgz_A 233 EHMESHGTQFLKGCVPSHIKKLPTNQL-QVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVD 311 (488)
T ss_dssp HHHHHTTCEEEETEEEEEEEECTTSCE-EEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBCCC
T ss_pred HHHHHCCCEEEeCCEEEEEEEcCCCcE-EEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEeEC
Confidence 778899999999999999986444443 354443 54 4799999999999999987 678888875 5789999
Q ss_pred CCCCCCCCceEEeccccccCCccCCcccccchHHHHHHHHHHHHHHHhcCCCC--CCCCCCceeeecccccCCCcceeeE
Q 012165 309 GQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRKVWWQ 386 (469)
Q Consensus 309 ~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~~--~~~~~p~~~~~~~~~~g~~~~~~~~ 386 (469)
+++||++|+|||+|||+.... ..+..|..+|+.+|+||++.... .+..+|+. .|..+ .+.
T Consensus 312 ~~~~t~~~~IyA~GD~~~~~~---------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~---~~~~p------~~a 373 (488)
T 3dgz_A 312 AQEATSVPHIYAIGDVAEGRP---------ELTPTAIKAGKLLAQRLFGKSSTLMDYSNVPTT---VFTPL------EYG 373 (488)
T ss_dssp TTSBCSSTTEEECGGGBTTCC---------CCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEE---ECSSS------EEE
T ss_pred CCCccCCCCEEEeEEecCCCC---------cchhHHHHHHHHHHHHHcCCCCccCCCCCCCEE---EECCC------CeE
Confidence 999999999999999985211 14556999999999999975433 45566753 23222 145
Q ss_pred EeecCCC---------cEEE-Ecc------------CCCcEEEEEEe---CCEEEEEEeecCChHHhHH-HHHHHhCCCC
Q 012165 387 FFGDNVG---------ETIE-IGN------------FDPKIATFWID---SGKLKGVLVESGSPEEFQL-LPTLARSQPF 440 (469)
Q Consensus 387 ~~G~~~~---------~~~~-~~~------------~~~~~~~~~~~---~~~l~g~~~~~~~~~~~~~-~~~~~~~~~~ 440 (469)
.+|.+.. .... ... ....+.|+.++ +++|+|+++++.++.++.. +..+|+.+.+
T Consensus 374 ~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t 453 (488)
T 3dgz_A 374 CVGLSEEEAVALHGQEHVEVYHAYYKPLEFTVADRDASQCYIKMVCMREPPQLVLGLHFLGPNAGEVTQGFALGIKCGAS 453 (488)
T ss_dssp EEECCHHHHHHHHCGGGEEEEEEECCCHHHHHTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTCB
T ss_pred EEeCCHHHHHhhCCCCcEEEEEccccchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCC
Confidence 5554431 1111 100 02347777775 4999999998887766554 4556788887
Q ss_pred CCh--hhhcCCCcHHHHHHHHHh
Q 012165 441 VDK--AKLQQASSVEEALEIARA 461 (469)
Q Consensus 441 ~~~--~~~~~~~~~~~~~~~~~~ 461 (469)
++. ..++.|||++|++..+..
T Consensus 454 ~~~l~~~~~~hPt~~e~~~~~~~ 476 (488)
T 3dgz_A 454 YAQVMQTVGIHPTCSEEVVKLHI 476 (488)
T ss_dssp HHHHHTSCCCSSCSTHHHHTCCE
T ss_pred HHHHhccccCCCChHHHHHHHHH
Confidence 763 335789999999987653
No 48
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=1.7e-38 Score=325.30 Aligned_cols=381 Identities=18% Similarity=0.157 Sum_probs=249.3
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC--CCCC-cccccCCC--CCCCCCCCCC--c----ccc
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE--RPAL-TKGYLFPL--DKKPARLPGF--H----TCV 118 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~--~~~l-~~~~~~~~--~~~~~~~~~~--~----~~~ 118 (469)
.++||+|||||+||++||..|++.|. +|+|||+++.-+-. +... ++.++... .....+++.+ . ...
T Consensus 7 ~~~DvvVIGgG~aGl~aA~~la~~G~---~V~liE~~~~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 83 (492)
T 3ic9_A 7 INVDVAIIGTGTAGMGAYRAAKKHTD---KVVLIEGGAYGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRISVN 83 (492)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTCS---CEEEEESSCSSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEEEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCC---cEEEEeCCCCCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCCccC
Confidence 35899999999999999999999987 79999997521100 0000 00000000 0000000000 0 000
Q ss_pred CCCCCCCCH-----------hHHHHC-CcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCCcCCCCCCCCcC
Q 012165 119 GSGGERQTP-----------EWYKEK-GIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLP 186 (469)
Q Consensus 119 ~~~~~~~~~-----------~~~~~~-~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~~ 186 (469)
......+.. ..+... +++++.+ .....+ .++|.+.+++++.||+||||||++|. .|++++...+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g-~a~~~~--~~~v~~~~~~~~~~d~lViATGs~p~-~p~~~~~~~~ 159 (492)
T 3ic9_A 84 GKAVMKRIQTERDRFVGFVVESVESFDEQDKIRG-FAKFLD--EHTLQVDDHSQVIAKRIVIATGSRPN-YPEFLAAAGS 159 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEES-CEEEEE--TTEEEETTTEEEEEEEEEECCCEECC-CCHHHHTTGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEE-EEEEec--CCEEEEcCCcEEEeCEEEEccCCCCc-CCCCCCccCC
Confidence 000000000 111111 3445554 333333 56888888889999999999999987 4543333233
Q ss_pred cEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe------------------eeHHHHHHcCcEEE
Q 012165 187 GVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------------RYEQLYQQNGVKFV 248 (469)
Q Consensus 187 ~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------------~~~~~l~~~gV~~~ 248 (469)
.+++ ++.+......+++++|||+|++|+|+|..|.++|.+|+ .+.+.+++. |+++
T Consensus 160 ~v~t------~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~-V~i~ 232 (492)
T 3ic9_A 160 RLLT------NDNLFELNDLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANLQDEEMKRYAEKTFNEE-FYFD 232 (492)
T ss_dssp GEEC------HHHHTTCSSCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTCCCHHHHHHHHHHHHTT-SEEE
T ss_pred cEEc------HHHHhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccccCCHHHHHHHHHHHhhC-cEEE
Confidence 4433 33333334568999999999999999999999999988 345667677 9999
Q ss_pred cCCeEEEEEeCCCCcEEEEEcC--CC--CEEeCCEEEEccCCccCCch--hhhcCCccc-CCCEEeC-CCCCCCCCceEE
Q 012165 249 KGASIKNLEAGSDGRVAAVKLE--DG--STIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVD-GQFRTRMPGIFA 320 (469)
Q Consensus 249 ~~~~v~~i~~~~~~~v~~v~~~--~g--~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~Vd-~~~~t~~~~Vfa 320 (469)
+++.+++++..++ .+ .+.+. +| +++++|.||+|+|++|++++ ++.+|++.+ +|+|.|| +++||+.|+|||
T Consensus 233 ~~~~v~~i~~~~~-~v-~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t~~~~IyA 310 (492)
T 3ic9_A 233 AKARVISTIEKED-AV-EVIYFDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQTSVDHIFV 310 (492)
T ss_dssp TTCEEEEEEECSS-SE-EEEEECTTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCBCSSTTEEE
T ss_pred ECCEEEEEEEcCC-EE-EEEEEeCCCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECcccccCCCCCEEE
Confidence 9999999986533 33 35553 67 68999999999999999988 788899876 6789999 899999999999
Q ss_pred eccccccCCccCCcccccchHHHHHHHHHHHHHHHhcC-CCC--CCCCCCceeeecccccCCCcceeeEEeecCCC----
Q 012165 321 IGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSA-QTH--TYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG---- 393 (469)
Q Consensus 321 ~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~-~~~--~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~---- 393 (469)
+|||+..+. .+..|..+|+.+|.+|++. ... .+..+|+ ..|..+ .+..+|.+..
T Consensus 311 ~GD~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~---~~~~~p------~~a~vGlte~~a~~ 371 (492)
T 3ic9_A 311 AGDANNTLT----------LLHEAADDGKVAGTNAGAYPVIAQGQRRAPLS---VVFTEP------QVASVGLSLRQIED 371 (492)
T ss_dssp CGGGGTSSC----------SHHHHHHHHHHHHHHHHHTTSCCEECCCCCEE---EECSSS------EEEEEESCHHHHHH
T ss_pred EEecCCCCc----------cHHHHHHHHHHHHHHHcCCCCCcccCCCCCcE---EEECCC------CeEEecCCHHHHHh
Confidence 999997643 4556999999999999973 222 2333443 233221 1444554321
Q ss_pred --------cEEE-Ecc-----------CCCcEEEEEEe--CCEEEEEEeecCChHHhHH-HHHHHhCCCCCCh--hhhcC
Q 012165 394 --------ETIE-IGN-----------FDPKIATFWID--SGKLKGVLVESGSPEEFQL-LPTLARSQPFVDK--AKLQQ 448 (469)
Q Consensus 394 --------~~~~-~~~-----------~~~~~~~~~~~--~~~l~g~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~ 448 (469)
+... .-. ....+.|+.++ +++|+|+++++.++.++.. +..+|+.+.+++. ..++.
T Consensus 372 ~~g~~~g~~~~~~~~~~~~~~~a~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~ 451 (492)
T 3ic9_A 372 LYADQDAANYVVGQVSFEGQGRSRVMGKNKGLLNVYADRTSGEFLGAEMFGPAAEHIGHLLAWARQQQMTVQAMLTMPFY 451 (492)
T ss_dssp HCSCSSSCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHTTSCCC
T ss_pred ccCccCCccEEEEEEEeccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCCCC
Confidence 1111 000 12347777775 5999999998888866555 4456788877662 33478
Q ss_pred CCcHHHHHHHHHhcCCc
Q 012165 449 ASSVEEALEIARAALPV 465 (469)
Q Consensus 449 ~~~~~~~~~~~~~~~~~ 465 (469)
|||+.|++++|++++.+
T Consensus 452 hPt~~e~~~~a~~~~~~ 468 (492)
T 3ic9_A 452 HPVIEEGLRTALRDAQQ 468 (492)
T ss_dssp TTCTHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHH
Confidence 99999999999887554
No 49
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=3.4e-38 Score=325.04 Aligned_cols=384 Identities=19% Similarity=0.238 Sum_probs=254.2
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC-CC----------c-cccc--------------C
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP-AL----------T-KGYL--------------F 102 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~-~l----------~-~~~~--------------~ 102 (469)
+..+||+|||||+||++||..|++.|. +|+|||+.+..+.... .+ + +.++ +
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~---~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~ 106 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGK---KVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNY 106 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTC---CEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCC---eEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhc
Confidence 456899999999999999999999987 7999998652211100 00 0 0000 0
Q ss_pred CCC---CCCCCCCCCccccC---CCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCe--EEEeccEEeccCCCC
Q 012165 103 PLD---KKPARLPGFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGK--LLKYGSLIVATGCTA 174 (469)
Q Consensus 103 ~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~--~~~yd~lVlAtG~~~ 174 (469)
+.. ....++..+..... ..........++..+++++.+ .+..+++....|.+.+|+ ++.||+||||||++|
T Consensus 107 g~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g-~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~p 185 (519)
T 3qfa_A 107 GWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENA-YGQFIGPHRIKATNNKGKEKIYSAERFLIATGERP 185 (519)
T ss_dssp TBCCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEETTEEEEECTTCCCCEEEEEEEEECCCEEE
T ss_pred CcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEeeCCEEEEEcCCCCEEEEECCEEEEECCCCc
Confidence 000 00000000000000 000000112345679999886 778888877777777764 799999999999998
Q ss_pred CcCCCCCCCCcCcEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe-----------------eeH
Q 012165 175 SRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT-----------------RYE 237 (469)
Q Consensus 175 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~-----------------~~~ 237 (469)
+ .|.++|... ...+ .+.+......+++++|||+|++|+|+|..|+++|.+|+ .+.
T Consensus 186 ~-~p~i~G~~~----~~~t---~~~~~~l~~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l~~~d~~~~~~~~ 257 (519)
T 3qfa_A 186 R-YLGIPGDKE----YCIS---SDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIG 257 (519)
T ss_dssp C-CCCCTTHHH----HCBC---HHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTTSCHHHHHHHH
T ss_pred C-CCCCCCccC----ceEc---HHHHhhhhhcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecccccccCCHHHHHHHH
Confidence 7 455555211 1112 33333333457889999999999999999999999987 445
Q ss_pred HHHHHcCcEEEcCCeEEEEEeCCC---CcE-EEEEcCCCC---EEeCCEEEEccCCccCCch--hhhcCCccc--CCCEE
Q 012165 238 QLYQQNGVKFVKGASIKNLEAGSD---GRV-AAVKLEDGS---TIDADTIVIGIGAKPTVSP--FERVGLNSS--VGGIQ 306 (469)
Q Consensus 238 ~~l~~~gV~~~~~~~v~~i~~~~~---~~v-~~v~~~~g~---~i~~D~vi~a~G~~p~~~~--~~~~gl~~~--~g~i~ 306 (469)
+.+++.||++++++.+++++..++ +.+ ..+...+|. ++++|.||+++|++||+++ ++.+|++.+ +|+|.
T Consensus 258 ~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~ 337 (519)
T 3qfa_A 258 EHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIP 337 (519)
T ss_dssp HHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBC
T ss_pred HHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCeEe
Confidence 678899999999988888765322 322 223345552 5789999999999999986 688888875 57899
Q ss_pred eCCCCCCCCCceEEeccccccCCccCCcccccchHHHHHHHHHHHHHHHhcCCCC--CCCCCCceeeecccccCCCccee
Q 012165 307 VDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRKVW 384 (469)
Q Consensus 307 Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~~--~~~~~p~~~~~~~~~~g~~~~~~ 384 (469)
||+++||++|+|||+|||+.... ..+..|..+|+.+|+||++.... .+..+|+ ..|..+.
T Consensus 338 Vd~~~~Ts~~~IyA~GD~~~g~~---------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~---~~~~~p~------ 399 (519)
T 3qfa_A 338 VTDEEQTNVPYIYAIGDILEDKV---------ELTPVAIQAGRLLAQRLYAGSTVKCDYENVPT---TVFTPLE------ 399 (519)
T ss_dssp CCTTSBCSSTTEEECGGGBSSSC---------CCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCE---EECSSSC------
T ss_pred eCCCCccCCCCEEEEEeccCCCC---------ccHHHHHHHHHHHHHHHcCCCCccCCCCcCcE---EEECCCc------
Confidence 99999999999999999994211 14556999999999999975432 3455564 3333221
Q ss_pred eEEeecCCC---------cEEE-Ec------------cCCCcEEEEEEe---CCEEEEEEeecCChHHhHH-HHHHHhCC
Q 012165 385 WQFFGDNVG---------ETIE-IG------------NFDPKIATFWID---SGKLKGVLVESGSPEEFQL-LPTLARSQ 438 (469)
Q Consensus 385 ~~~~G~~~~---------~~~~-~~------------~~~~~~~~~~~~---~~~l~g~~~~~~~~~~~~~-~~~~~~~~ 438 (469)
+..+|.++. .... .. .....|.|+.++ +++|+|+++++.++.++.. +..+|+.+
T Consensus 400 ~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~~ilGa~i~g~~a~e~i~~~~~ai~~~ 479 (519)
T 3qfa_A 400 YGACGLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCG 479 (519)
T ss_dssp EEEEECCHHHHHHHHCGGGEEEEEEEECCHHHHTTTCCTTTEEEEEEEETTTTCEEEEEEEESTTHHHHHHHHHHHHHTT
T ss_pred eEEecCCHHHHHhhCCCCCEEEEEEeccchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCC
Confidence 455665431 1111 00 012347787775 4899999997777765544 45567888
Q ss_pred CCCCh--hhhcCCCcHHHHHHHHHhc
Q 012165 439 PFVDK--AKLQQASSVEEALEIARAA 462 (469)
Q Consensus 439 ~~~~~--~~~~~~~~~~~~~~~~~~~ 462 (469)
.+++. ..++.|||++|+++++...
T Consensus 480 ~t~~~l~~~~~~hPt~~E~~~~~~~~ 505 (519)
T 3qfa_A 480 LTKKQLDSTIGIHPVCAEVFTTLSVT 505 (519)
T ss_dssp CBHHHHHHSCCCTTCGGGGGGGCCCB
T ss_pred CCHHHHhccccCCCChHHHHHHHHhh
Confidence 87763 3357899999999876644
No 50
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=6.8e-39 Score=328.05 Aligned_cols=377 Identities=20% Similarity=0.252 Sum_probs=255.9
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC---CCCC-cc----------------cccCCCCCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE---RPAL-TK----------------GYLFPLDKKPA 109 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~---~~~l-~~----------------~~~~~~~~~~~ 109 (469)
.++||+|||||+||+++|..|++.|+ +|+|||++. .+.. .... ++ .+.........
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~---~V~liEk~~-~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~ 100 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGK---RVAIAEEYR-IGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIF 100 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcC---EEEEEeCCC-CCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCcc
Confidence 46899999999999999999999987 799999943 2110 0000 00 00000000000
Q ss_pred CCCCCccc---cCCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeC-CCeEEEeccEEeccCCCCCcCCCCCCCCc
Q 012165 110 RLPGFHTC---VGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITN-SGKLLKYGSLIVATGCTASRFPEKIGGYL 185 (469)
Q Consensus 110 ~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~-~g~~~~yd~lVlAtG~~~~~~~~~~g~~~ 185 (469)
+++.+... ...........++++.+++++.+ .+..++. +.+.+. ++..+.||+||||||+.|...|.++|.+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~i~~--~~v~v~~~~~~~~~d~lviAtG~~p~~~p~i~G~~- 176 (484)
T 3o0h_A 101 NWEKLVAAKNKEISRLEGLYREGLQNSNVHIYES-RAVFVDE--HTLELSVTGERISAEKILIATGAKIVSNSAIKGSD- 176 (484)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEEEET--TEEEETTTCCEEEEEEEEECCCEEECCC--CBTGG-
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEeeC--CEEEEecCCeEEEeCEEEEccCCCcccCCCCCCcc-
Confidence 00000000 00000001223456679999986 7777764 567776 7788999999999999886345555532
Q ss_pred CcEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe------------------eeHHHHHHcCcEE
Q 012165 186 PGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------------RYEQLYQQNGVKF 247 (469)
Q Consensus 186 ~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------------~~~~~l~~~gV~~ 247 (469)
.+.+ .+.+......+++++|||+|++|+|+|..+.++|.+++ .+.+.+++.||++
T Consensus 177 -~~~~------~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i 249 (484)
T 3o0h_A 177 -LCLT------SNEIFDLEKLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISI 249 (484)
T ss_dssp -GSBC------TTTGGGCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEE
T ss_pred -cccc------HHHHHhHHhcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccccCHHHHHHHHHHHHHCCCEE
Confidence 1222 12222223458999999999999999999999999887 3456788899999
Q ss_pred EcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCch--hhhcCCccc-CCCEEeCCCCCCCCCceEEeccc
Q 012165 248 VKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDV 324 (469)
Q Consensus 248 ~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~Vd~~~~t~~~~Vfa~GD~ 324 (469)
++++.|++++.++ +.+ .+.+++|+++++|.||+|+|++|++.+ ++..|++.+ +|+|.||+++||++|+|||+|||
T Consensus 250 ~~~~~V~~i~~~~-~~v-~v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~ 327 (484)
T 3o0h_A 250 IYEATVSQVQSTE-NCY-NVVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTTNVSHIWAVGDV 327 (484)
T ss_dssp ESSCCEEEEEECS-SSE-EEEETTSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECGGG
T ss_pred EeCCEEEEEEeeC-CEE-EEEECCCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECCCCCCCCCCEEEEEec
Confidence 9999999998643 344 688899999999999999999999987 678888876 57799999999999999999999
Q ss_pred cccCCccCCcccccchHHHHHHHHHHHHHHHhcCCCC--CCCCCCceeeecccccCCCcceeeEEeecCCCc-------E
Q 012165 325 AAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------T 395 (469)
Q Consensus 325 a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~~--~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~~-------~ 395 (469)
+..+. .+..|..+|+.+|++|++.... .+..+|+ ..|..+. +..+|.++.+ .
T Consensus 328 ~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~---~~~~~p~------~a~vGlte~~a~~~g~~~ 388 (484)
T 3o0h_A 328 TGHIQ----------LTPVAIHDAMCFVKNAFENTSTTPDYDLITT---AVFSQPE------IGTVGLSEEDALHRYKRV 388 (484)
T ss_dssp GTSCC----------CHHHHHHHHHHHHHHHHC---CCCCCTTCCE---EECCSSC------EEEEECCHHHHHHHCSEE
T ss_pred CCCCc----------CHHHHHHHHHHHHHHHcCCCCCcCCCCCCcE---EEECCCC------EEEeeCCHHHHHHcCCCE
Confidence 97432 4456999999999999975433 4555664 3344322 5556654321 1
Q ss_pred EE-Ec-----------cCCCcEEEEEEe--CCEEEEEEeecCChHHhHH-HHHHHhCCCCCCh--hhhcCCCcHHHHHHH
Q 012165 396 IE-IG-----------NFDPKIATFWID--SGKLKGVLVESGSPEEFQL-LPTLARSQPFVDK--AKLQQASSVEEALEI 458 (469)
Q Consensus 396 ~~-~~-----------~~~~~~~~~~~~--~~~l~g~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 458 (469)
.. .. +....+.|+.++ +++|+|+++++.++.++.. +..+|+.+.+++. ..++.|||+.|++++
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~ 468 (484)
T 3o0h_A 389 EIYRTVFRPMRNVLSGSPEKMFMKLVVDGESRIVVGAHVLGENAGEIAQLIGISLKGKLTKDIFDKTMAVHPTMSEELVT 468 (484)
T ss_dssp EEEEEEECCHHHHHHTCCCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGGGGC
T ss_pred EEEEecCCcchhhccCCCCcEEEEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhccccCCCChHHHHHH
Confidence 11 10 012346777775 5999999998877766554 4456788877762 335789999999998
Q ss_pred HHhc
Q 012165 459 ARAA 462 (469)
Q Consensus 459 ~~~~ 462 (469)
++..
T Consensus 469 ~~~~ 472 (484)
T 3o0h_A 469 MYKP 472 (484)
T ss_dssp CCSC
T ss_pred Hhhh
Confidence 7743
No 51
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=100.00 E-value=2.3e-38 Score=349.31 Aligned_cols=335 Identities=18% Similarity=0.163 Sum_probs=236.6
Q ss_pred cccccccccccccccc--CCCCcccccc---cCCccccccccccccc---------cc--------CCCCCCcEEEEcCc
Q 012165 3 SVSNSLSFKHGLSLWC--PQSPSLHRIR---HSSAKNFQRRGFVVAY---------SS--------FANENREFVIVGGG 60 (469)
Q Consensus 3 ~~~~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~~~~---------~~--------~~~~~~~vvIIGgG 60 (469)
.++||||.+|||+||+ +|+..|.+.. .++++..++++..+.. .+ .....+||+|||||
T Consensus 117 ~~~n~~p~~~grvCp~~~~Ce~~C~~~~~~~~pv~I~~le~~~~d~~~~~~~~~~~~p~~~~~~~~~~~~~~~VvVIGgG 196 (1025)
T 1gte_A 117 FSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGSINIGGLQQFASEVFKAMNIPQIRNPCLPSQEKMPEAYSAKIALLGAG 196 (1025)
T ss_dssp HHHCTTHHHHHHHCCGGGSGGGGCGGGGSTTCCCCHHHHHHHHHHHHHHHTCCCCCCTTSCCGGGSCGGGGCCEEEECCS
T ss_pred HhcCChhHhhcCCCCChhhHHhhCccCCCCCCCccHhHHHHHHHHHHHHhCCccccCccccccccCCccCCCEEEEECcc
Confidence 4689999999999998 9999999964 6888888887655421 11 01235799999999
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHHHHCCcEEEeC
Q 012165 61 NAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQ 140 (469)
Q Consensus 61 ~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 140 (469)
+||++||.+|++.|+ . +|+|+|+++.++.. +. +..+. ..++. . ......+++++.|++++.+
T Consensus 197 pAGl~aA~~L~~~G~-~-~Vtv~E~~~~~GG~---~~--~~ip~----~~~~~--~-----~~~~~~~~~~~~gv~~~~~ 258 (1025)
T 1gte_A 197 PASISCASFLARLGY-S-DITIFEKQEYVGGL---ST--SEIPQ----FRLPY--D-----VVNFEIELMKDLGVKIICG 258 (1025)
T ss_dssp HHHHHHHHHHHHTTC-C-CEEEEESSSSCSTH---HH--HTSCT----TTSCH--H-----HHHHHHHHHHTTTCEEEES
T ss_pred HHHHHHHHHHHhcCC-C-cEEEEeCCCCCCcc---cc--ccCCc----ccCCH--H-----HHHHHHHHHHHCCcEEEcc
Confidence 999999999999997 2 69999998654321 00 00110 01100 0 0112246778899999998
Q ss_pred CcEEEEeCCCcEEEeCCCeEEEeccEEeccCC-CCCcCCCCCCCC-cCcEEEecCHHHHHHHHHh----------hhcCC
Q 012165 141 DPVTSIDIEKQTLITNSGKLLKYGSLIVATGC-TASRFPEKIGGY-LPGVHYIRDVADADALISS----------LEKAK 208 (469)
Q Consensus 141 ~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~-~~~~~~~~~g~~-~~~v~~~~~~~~~~~~~~~----------~~~~~ 208 (469)
+.+. .+.++++++.++.||+||||||+ .|+.+|.++|.. .+++++..++......... ...++
T Consensus 259 ~~v~-----~~~v~~~~~~~~~~d~vvlAtGa~~p~~l~~~~G~~~~~gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~ 333 (1025)
T 1gte_A 259 KSLS-----ENEITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRG 333 (1025)
T ss_dssp CCBS-----TTSBCHHHHHHTTCCEEEECCCCCEECCCGGGTTCCTTTTEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCS
T ss_pred cEec-----cceEEhhhcCccCCCEEEEecCCCCCCCCCCCCCCCCCCCEEEhHHHHHHHHhhcccccccccccccccCC
Confidence 6652 13455555555789999999999 476554434432 4677664332221110000 12357
Q ss_pred eEEEEcCChHHHHHHHHHHhCCC-eEee--------------eHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcC---
Q 012165 209 KVVVVGGGYIGMEVAAAAVGWKL-DTTR--------------YEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE--- 270 (469)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g~-~v~~--------------~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~--- 270 (469)
+|+|||||.+|+|+|..+.++|. +|+. ..+.+++.||+++++..+.++..+ ++++.++++.
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~~~~e~~~~~~~Gv~~~~~~~~~~i~~~-~g~v~~v~~~~~~ 412 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRAVPEEVELAKEEKCEFLPFLSPRKVIVK-GGRIVAVQFVRTE 412 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCCSCHHHHHHHHHTTCEEECSEEEEEEEEE-TTEEEEEEEEEEE
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCCCCHHHHHHHHHcCCEEEeCCCceEEEcc-CCeEEEEEEEEeE
Confidence 99999999999999999999996 7771 124577899999999999999753 5666556543
Q ss_pred ---CC---------CEEeCCEEEEccCCccC-Cchhhh-cCCccc-CCCEEeCC-CCCCCCCceEEeccccccCCccCCc
Q 012165 271 ---DG---------STIDADTIVIGIGAKPT-VSPFER-VGLNSS-VGGIQVDG-QFRTRMPGIFAIGDVAAFPLKMYDR 334 (469)
Q Consensus 271 ---~g---------~~i~~D~vi~a~G~~p~-~~~~~~-~gl~~~-~g~i~Vd~-~~~t~~~~Vfa~GD~a~~~~~~~~~ 334 (469)
+| +++++|.||+|+|++|+ ..++.+ .|++.+ +|+|.||+ ++||+.|+|||+|||+..+.
T Consensus 413 ~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl~~~~~G~I~vd~~~~~Ts~~~VfA~GD~~~~~~----- 487 (1025)
T 1gte_A 413 QDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQTSEPWVFAGGDIVGMAN----- 487 (1025)
T ss_dssp ECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTTSCBCTTSSBCCCTTTCBCSSTTEEECSGGGCSCC-----
T ss_pred EcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccCceECCCCCEEECCCCCccCCCCEEEeCCCCCCch-----
Confidence 23 36899999999999874 556666 478876 67899997 89999999999999998543
Q ss_pred ccccchHHHHHHHHHHHHHHHhc-------CCCCCCCCCCceee
Q 012165 335 TARVEHVDHARQSAQHCIKALLS-------AQTHTYDYLPYFYS 371 (469)
Q Consensus 335 ~~~~~~~~~A~~~a~~~a~~i~~-------~~~~~~~~~p~~~~ 371 (469)
.+..|+.+|+.+|.+|.+ .....++.+||||+
T Consensus 488 -----~~~~A~~~G~~aA~~i~~~L~~~~~~~~~~~~~~p~~~~ 526 (1025)
T 1gte_A 488 -----TTVESVNDGKQASWYIHKYIQAQYGASVSAKPELPLFYT 526 (1025)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCCBCCCCC
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHhccCCCcccCcCcccccc
Confidence 334588888988888863 12235678999998
No 52
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=2.6e-37 Score=324.51 Aligned_cols=383 Identities=16% Similarity=0.211 Sum_probs=248.2
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC-CCc----------cccc---------------C
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP-ALT----------KGYL---------------F 102 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~-~l~----------~~~~---------------~ 102 (469)
..++||+|||||+||++||.+|++.|+ +|+|+|+....+.... .+. ...+ +
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~---~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~ 181 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGA---KTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHF 181 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTC---CEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccEEEECCCccHHHHHHHHHhCCC---eEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhC
Confidence 456899999999999999999999987 7999997322111000 000 0000 0
Q ss_pred CCC--C--CCCCCCCCccccCC---CCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCC--eEEEeccEEeccCCC
Q 012165 103 PLD--K--KPARLPGFHTCVGS---GGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCT 173 (469)
Q Consensus 103 ~~~--~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g--~~~~yd~lVlAtG~~ 173 (469)
+.. . ...++..+...... .........+...+++++.+ .+..++.....+.+.+| .++.||+||||||++
T Consensus 182 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~-~~~~~~~~~v~v~~~~g~~~~~~~d~lviAtGs~ 260 (598)
T 2x8g_A 182 GWSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNA-KGRLISPHEVQITDKNQKVSTITGNKIILATGER 260 (598)
T ss_dssp TCCCCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEETTEEEEECTTCCEEEEEEEEEEECCCEE
T ss_pred CccccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEE-EEEEcCCCEEEEEeCCCCeEEEEeCEEEEeCCCC
Confidence 000 0 00000000000000 00000011245678998875 66777766555666666 469999999999999
Q ss_pred CCcCCCCCCCCcCcEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe-----------------ee
Q 012165 174 ASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT-----------------RY 236 (469)
Q Consensus 174 ~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~-----------------~~ 236 (469)
|+ .|.++|.... ..+ .+.+......+++++|||+|++|+|+|..|+++|.+|+ .+
T Consensus 261 p~-~p~i~G~~~~-~~~------~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~~~d~~~~~~~ 332 (598)
T 2x8g_A 261 PK-YPEIPGAVEY-GIT------SDDLFSLPYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRSILLRGFDQQMAEKV 332 (598)
T ss_dssp EC-CCSSTTHHHH-CEE------HHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTTSCHHHHHHH
T ss_pred CC-CCCCCCcccc-eEc------HHHHhhCccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCcCcCcCCHHHHHHH
Confidence 87 4555553211 111 23333323457899999999999999999999999987 33
Q ss_pred HHHHHHcCcEEEcCCeEEEEEeC-----CC---CcE-EEEEcCCCCEEe--CCEEEEccCCccCCch--hhhcCCccc-C
Q 012165 237 EQLYQQNGVKFVKGASIKNLEAG-----SD---GRV-AAVKLEDGSTID--ADTIVIGIGAKPTVSP--FERVGLNSS-V 302 (469)
Q Consensus 237 ~~~l~~~gV~~~~~~~v~~i~~~-----~~---~~v-~~v~~~~g~~i~--~D~vi~a~G~~p~~~~--~~~~gl~~~-~ 302 (469)
.+.+++.||++++++.+++++.. ++ +.+ ..+.+.+|++++ +|.||+|+|++||+++ ++.+|++.+ +
T Consensus 333 ~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~ 412 (598)
T 2x8g_A 333 GDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKN 412 (598)
T ss_dssp HHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBCGGGCCCBCTT
T ss_pred HHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCchhcCceECCC
Confidence 56678899999999988888532 12 333 223456787665 9999999999999987 577888875 5
Q ss_pred CCEEeCCCCCCCCCceEEeccccccCCccCCcccccchHHHHHHHHHHHHHHHhcCCC--CCCCCCCceeeecccccCCC
Q 012165 303 GGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT--HTYDYLPYFYSRVFEYEGSP 380 (469)
Q Consensus 303 g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~--~~~~~~p~~~~~~~~~~g~~ 380 (469)
|+|.||+++||+.|+|||+|||+.... ..+..|..+|+.+|.+|++... ..|..+|+.+ |..+.
T Consensus 413 G~i~vd~~~~ts~~~VyA~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~~---~~~~~-- 478 (598)
T 2x8g_A 413 GRVVCTDDEQTTVSNVYAIGDINAGKP---------QLTPVAIQAGRYLARRLFAGATELTDYSNVATTV---FTPLE-- 478 (598)
T ss_dssp SCBCCCTTSBCSSTTEEECGGGBTTSC---------CCHHHHHHHHHHHHHHHHHCCCCCCCCTTCCEEE---CSSSC--
T ss_pred CcEEeCCCCcCCCCCEEEEeeecCCCC---------ccHHHHHHhHHHHHHHHhcCCCcccCCCCCcEEE---ECCCc--
Confidence 779999999999999999999965321 1455699999999999997543 3455666532 32211
Q ss_pred cceeeEEeecCCC---------cEEEE------------c-cCCCcEEEEEEe---CCEEEEEEeecCChHHhHH-HHHH
Q 012165 381 RKVWWQFFGDNVG---------ETIEI------------G-NFDPKIATFWID---SGKLKGVLVESGSPEEFQL-LPTL 434 (469)
Q Consensus 381 ~~~~~~~~G~~~~---------~~~~~------------~-~~~~~~~~~~~~---~~~l~g~~~~~~~~~~~~~-~~~~ 434 (469)
+..+|.... ..... + .....|.|++++ +++|+|+++++.++.++.. +..+
T Consensus 479 ----~a~vGl~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~ilG~~~~g~~a~~~i~~~~~a 554 (598)
T 2x8g_A 479 ----YGACGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAHREDNVCYMKLVCRKSDNMRVLGLHVLGPNAGEITQGYAVA 554 (598)
T ss_dssp ----EEEEECCHHHHHHHHCGGGEEEEEEEECCTHHHHTTCCSSCEEEEEEEETTTTTEEEEEEEESTTHHHHHHHHHHH
T ss_pred ----eEEEeCCHHHHHhhCCCCcEEEEEEeccchhHHhhcCCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHH
Confidence 344554321 01110 0 012347777775 6999999987776765444 4556
Q ss_pred HhCCCCCCh--hhhcCCCcHHHHHHHHHh
Q 012165 435 ARSQPFVDK--AKLQQASSVEEALEIARA 461 (469)
Q Consensus 435 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 461 (469)
|+.+.+++. ..++.||++.|+++.++.
T Consensus 555 i~~~~t~~~l~~~~~~hPt~~e~~~~~~~ 583 (598)
T 2x8g_A 555 IKMGATKADFDRTIGIHPTCSETFTTLHV 583 (598)
T ss_dssp HHTTCBHHHHHHSCCCSSCSGGGGGSCCC
T ss_pred HHcCCCHHHHhhccccCCCHHHHHHHHHH
Confidence 788877762 335789999999988775
No 53
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=6.4e-38 Score=320.67 Aligned_cols=282 Identities=21% Similarity=0.277 Sum_probs=208.9
Q ss_pred cCCCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCC
Q 012165 46 SFANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQ 125 (469)
Q Consensus 46 ~~~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (469)
|....+++|||||||+||+++|..|++.++ +|||||+++++.|. |.|+. ...+ ......+ ...
T Consensus 37 p~~~~KprVVIIGgG~AGl~~A~~L~~~~~---~VtLId~~~~~~~~-PlL~~-va~G-~l~~~~i-----------~~p 99 (502)
T 4g6h_A 37 PQHSDKPNVLILGSGWGAISFLKHIDTKKY---NVSIISPRSYFLFT-PLLPS-APVG-TVDEKSI-----------IEP 99 (502)
T ss_dssp CCSCSSCEEEEECSSHHHHHHHHHSCTTTC---EEEEEESSSEEECG-GGGGG-TTTT-SSCGGGG-----------EEE
T ss_pred CCCCCCCCEEEECCcHHHHHHHHHhhhCCC---cEEEECCCCCcccc-cchhH-Hhhc-cccHHHh-----------hhh
Confidence 344566799999999999999999988765 89999999988664 65543 1111 1000000 001
Q ss_pred CHhHH--HHCCcEEEeCCcEEEEeCCCcEEEeC--------------------CCeEEEeccEEeccCCCCCcCCCCCCC
Q 012165 126 TPEWY--KEKGIEMIYQDPVTSIDIEKQTLITN--------------------SGKLLKYGSLIVATGCTASRFPEKIGG 183 (469)
Q Consensus 126 ~~~~~--~~~~i~~~~~~~v~~id~~~~~v~~~--------------------~g~~~~yd~lVlAtG~~~~~~~~~~g~ 183 (469)
..... ++.+++++.+ +|++||+++++|++. ++.++.||+||||||+.+.. +.+||.
T Consensus 100 ~~~~~~~~~~~v~~~~~-~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~-~~ipG~ 177 (502)
T 4g6h_A 100 IVNFALKKKGNVTYYEA-EATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNT-FGIPGV 177 (502)
T ss_dssp HHHHHTTCSSCEEEEEE-EEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECC-TTCTTH
T ss_pred HHHHHHhhcCCeEEEEE-EEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCccccc-CCccCc
Confidence 11222 3457888885 899999999988763 35679999999999999874 455553
Q ss_pred CcCcEEEecCHHHHHHHHHhhh-----------------cCCeEEEEcCChHHHHHHHHHHhCC--------------Ce
Q 012165 184 YLPGVHYIRDVADADALISSLE-----------------KAKKVVVVGGGYIGMEVAAAAVGWK--------------LD 232 (469)
Q Consensus 184 ~~~~v~~~~~~~~~~~~~~~~~-----------------~~~~vvVvG~G~~g~e~A~~l~~~g--------------~~ 232 (469)
. +..+.++++.++..+++.+. ...+++|||+|++|+|+|..|++++ .+
T Consensus 178 ~-e~a~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~ 256 (502)
T 4g6h_A 178 T-DYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQ 256 (502)
T ss_dssp H-HHCEECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCE
T ss_pred c-cccCCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccce
Confidence 2 23467888888877655431 1247999999999999999987643 34
Q ss_pred Ee------------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCC----EEeCCEEEEccCCccCC
Q 012165 233 TT------------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS----TIDADTIVIGIGAKPTV 290 (469)
Q Consensus 233 v~------------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~----~i~~D~vi~a~G~~p~~ 290 (469)
++ .+++.|++.||++++++.|++++ +++.+....+.||+ ++++|+||||+|.+|+.
T Consensus 257 V~lve~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~--~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~ 334 (502)
T 4g6h_A 257 IHLVEALPIVLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVE--EKQLLAKTKHEDGKITEETIPYGTLIWATGNKARP 334 (502)
T ss_dssp EEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEETTEEEEEEC--SSEEEEEEECTTSCEEEEEEECSEEEECCCEECCH
T ss_pred eEEeccccccccCCCHHHHHHHHHHHHhcceeeecCceEEEEe--CCceEEEEEecCcccceeeeccCEEEEccCCcCCH
Confidence 44 56788999999999999999997 34555556677774 69999999999999983
Q ss_pred ---chhhhcCCccc-CCCEEeCCCCCC-CCCceEEeccccccCCccCCcccccchHHHHHHHHHHHHHHHhc
Q 012165 291 ---SPFERVGLNSS-VGGIQVDGQFRT-RMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLS 357 (469)
Q Consensus 291 ---~~~~~~gl~~~-~g~i~Vd~~~~t-~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~ 357 (469)
.+....++..+ +|+|.||++||| ++|||||+|||+..+.+. ..+.|.+||+++|+||.+
T Consensus 335 ~~~~l~~~~~~~~~~~g~I~Vd~~lq~~~~~~IfAiGD~a~~~~p~--------~a~~A~qqg~~~A~ni~~ 398 (502)
T 4g6h_A 335 VITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFAGLPP--------TAQVAHQEAEYLAKNFDK 398 (502)
T ss_dssp HHHHHHHHSGGGTTCCSSEEBCTTSBBTTCSSEEECGGGEESSSCC--------CHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHhccccccCCCceeECCccccCCCCCEEEEEcccCCCCCC--------chHHHHHHHHHHHHHHHH
Confidence 23345555544 678999999999 899999999999876532 556799999999999954
No 54
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.5e-36 Score=293.24 Aligned_cols=280 Identities=23% Similarity=0.313 Sum_probs=200.6
Q ss_pred CCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCH
Q 012165 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (469)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (469)
+.+.|||+||||||||++||.+|++.|+ +|+|||++..- .. .+.. ....++|++....+.+......
T Consensus 3 te~~yDvvIIG~GpAGl~aA~~l~~~g~---~V~liE~~~~g-G~-------~~~~--~~i~~~p~~~~~~~~~~~~~~~ 69 (312)
T 4gcm_A 3 TEIDFDIAIIGAGPAGMTAAVYASRANL---KTVMIERGIPG-GQ-------MANT--EEVENFPGFEMITGPDLSTKMF 69 (312)
T ss_dssp -CCSEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCTT-GG-------GGGC--SCBCCSTTCSSBCHHHHHHHHH
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCC---CEEEEecCCCC-Ce-------eecc--cccCCcCCccccchHHHHHHHH
Confidence 3456999999999999999999999987 79999986321 00 1100 0111223222111111112233
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCCcCCCCCCCCc---CcEEEecCHHHHHHHHHhh
Q 012165 128 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADALISSL 204 (469)
Q Consensus 128 ~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~---~~v~~~~~~~~~~~~~~~~ 204 (469)
.++.+.+..+..+..+...+.....+...+++++.||+||||||++|+ .|++||.+. .++.+. .......
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~liiAtGs~~~-~~~ipG~~~~~~~~v~~~------~~~~~~~ 142 (312)
T 4gcm_A 70 EHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYK-KIGVPGEQELGGRGVSYC------AVCDGAF 142 (312)
T ss_dssp HHHHHTTCEEEECCCCEEEECSSCEEEECSSCEEEEEEEEECCCEEEC-CCCCTTTTTTBTTTEESC------HHHHGGG
T ss_pred HHHhhccccccceeeeeeeeeecceeeccCCeEEEeceeEEcccCccC-cCCCCChhhhCCccEEee------eccCccc
Confidence 455677888888777777777777888888889999999999999987 456677543 233332 1222234
Q ss_pred hcCCeEEEEcCChHHHHHHHHHHhCCCeEe-------------eeHHHHHHcCcEEEcCCeEEEEEeCCCC--cEEEEEc
Q 012165 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTT-------------RYEQLYQQNGVKFVKGASIKNLEAGSDG--RVAAVKL 269 (469)
Q Consensus 205 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~-------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~--~v~~v~~ 269 (469)
.++++++|||+|++|+|+|..|+++|.+|+ ...+.+++.++.......+..+...+.. .......
T Consensus 143 ~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (312)
T 4gcm_A 143 FKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTST 222 (312)
T ss_dssp GTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSCHHHHHHHHHCTTEEEECSEEEEEEEEETTEEEEEEEEET
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCcchhHHHHHHHhcCcceeeecceeeeeccccccccceeeee
Confidence 568999999999999999999999999998 2245567788888888777666543211 1111222
Q ss_pred C--CCCEEeCCEEEEccCCccCCchhhhcCCcccCCCEEeCCCCCCCCCceEEeccccccCCccCCcccccchHHHHHHH
Q 012165 270 E--DGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQS 347 (469)
Q Consensus 270 ~--~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~ 347 (469)
. ++..+++|.|++++|.+|++.+++..++..++|+|.||++||||+|+|||+|||+..+.. .+..|..+
T Consensus 223 ~~~~~~~~~~d~v~~~~g~~~~~~~~~~~g~~~~~G~I~vd~~~~Ts~pgIyA~GDv~~~~~~---------~~~~A~~~ 293 (312)
T 4gcm_A 223 KDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIVTKDDMTTSVPGIFAAGDVRDKGLR---------QIVTATGD 293 (312)
T ss_dssp TTCCEEEEECSEEEECSCEEESCGGGGGGTCBCTTSCBCCCTTSBCSSTTEEECSTTBSCSCC---------SHHHHHHH
T ss_pred cCCceeEEeeeeEEeecCCCcCchhHHhcceecCCCeEeeCCCCccCCCCEEEEeecCCCcch---------HHHHHHHH
Confidence 2 335799999999999999999999999988888899999999999999999999974321 34458889
Q ss_pred HHHHHHHHh
Q 012165 348 AQHCIKALL 356 (469)
Q Consensus 348 a~~~a~~i~ 356 (469)
|+.||.+|.
T Consensus 294 G~~AA~~i~ 302 (312)
T 4gcm_A 294 GSIAAQSAA 302 (312)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998885
No 55
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=4.8e-36 Score=295.62 Aligned_cols=300 Identities=22% Similarity=0.314 Sum_probs=208.3
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHh
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 128 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (469)
++++||+|||||+||+++|..|++.|+ +|+|||+.+.+..... .+.+ .......+++.............+
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~~gg~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~l~~ 82 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMNNI---SCRIIESMPQLGGQLA-----ALYP-EKHIYDVAGFPEVPAIDLVESLWA 82 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCHHHH-----HTCT-TSEECCSTTCSSEEHHHHHHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCC---CEEEEecCCCCCCccc-----ccCC-CcccccCCCCCCCCHHHHHHHHHH
Confidence 346899999999999999999999887 7999999875431100 0000 000111111110000000112234
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCc---EEEeCCCeEEEeccEEeccCCC---CCcCCCCCC-C-CcC--cEEEe-cCHHHH
Q 012165 129 WYKEKGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCT---ASRFPEKIG-G-YLP--GVHYI-RDVADA 197 (469)
Q Consensus 129 ~~~~~~i~~~~~~~v~~id~~~~---~v~~~~g~~~~yd~lVlAtG~~---~~~~~~~~g-~-~~~--~v~~~-~~~~~~ 197 (469)
.+++.+++++.+++|+.++.... .|++.+++++.||+||+|||+. |. .+.++| . ... ++++. ++..
T Consensus 83 ~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~-~~~i~g~~~~~~~~~v~~~~~~~~-- 159 (360)
T 3ab1_A 83 QAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPR-KLPQLGNIDHLTGSSVYYAVKSVE-- 159 (360)
T ss_dssp HHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBC-CCGGGCCCTTTBTTTEESSCSCGG--
T ss_pred HHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCCC-CCCCCCchhhCcCceEEEecCCHH--
Confidence 45667899999889999987643 7888888889999999999984 43 344555 2 222 24322 2111
Q ss_pred HHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe----------------eeHHHHHHcCcEEEcCCeEEEEEeCCC
Q 012165 198 DALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT----------------RYEQLYQQNGVKFVKGASIKNLEAGSD 261 (469)
Q Consensus 198 ~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~----------------~~~~~l~~~gV~~~~~~~v~~i~~~~~ 261 (469)
...+++++|||+|.+|+|+|..|.+.+.+++ .+.+.+++.||++++++.+.+++.+ +
T Consensus 160 ------~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~-~ 232 (360)
T 3ab1_A 160 ------DFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGHGKTAHEVERARANGTIDVYLETEVASIEES-N 232 (360)
T ss_dssp ------GGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSCSHHHHSSHHHHHHTSEEEESSEEEEEEEEE-T
T ss_pred ------HcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCCHHHHHHHHHHhhcCceEEEcCcCHHHhccC-C
Confidence 1257999999999999999999999998887 4567778889999999999999864 4
Q ss_pred CcEEEEEcC--CC--CEEeCCEEEEccCCccCCchhhhcCCcccCCCEEeCCCCCCCCCceEEeccccccCCccCCcccc
Q 012165 262 GRVAAVKLE--DG--STIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTAR 337 (469)
Q Consensus 262 ~~v~~v~~~--~g--~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~ 337 (469)
+.+..|.+. +| +++++|.||+++|++|++++++.+++..++|+|.||+++||++|+|||+|||+..+..
T Consensus 233 ~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~------- 305 (360)
T 3ab1_A 233 GVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLGPLARWDLELYENALVVDSHMKTSVDGLYAAGDIAYYPGK------- 305 (360)
T ss_dssp TEEEEEEEEETTCCEEEEECSEEEECCCBCCSCGGGGGSSCCEETTEEECCTTSBCSSTTEEECSTTEECTTC-------
T ss_pred CceEEEEEEecCCCeEEEeCCEEEECCCCCCCHHHHHhhccccccCeeeecCCCcCCCCCEEEecCccCCCCc-------
Confidence 555566664 77 5799999999999999999999988887778999999999999999999999986531
Q ss_pred cchHHHHHHHHHHHHHHHhcCCCCCCCCCCceeeecc
Q 012165 338 VEHVDHARQSAQHCIKALLSAQTHTYDYLPYFYSRVF 374 (469)
Q Consensus 338 ~~~~~~A~~~a~~~a~~i~~~~~~~~~~~p~~~~~~~ 374 (469)
...+..|..+|..+|++|.+.........+++|+..+
T Consensus 306 ~~~~~~A~~~g~~aa~~i~~~l~~~~~~~~~~~~~~~ 342 (360)
T 3ab1_A 306 LKIIQTGLSEATMAVRHSLSYIKPGEKIRNVFSSVKM 342 (360)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHSCC------------
T ss_pred cceeehhHHHHHHHHHHHHhhcCCccccCceeccchh
Confidence 2256678899999999997532211222344554433
No 56
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=9.9e-37 Score=296.71 Aligned_cols=281 Identities=17% Similarity=0.234 Sum_probs=206.7
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
+++||+|||||+||+++|..|++.|+ +|+|+|+++.+.... . ...+ .....+++++.............+.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~~gG~~---~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQA---SVKIIESLPQLGGQL---S--ALYP-EKYIYDVAGFPKIRAQELINNLKEQ 76 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCHHH---H--HHCT-TSEECCSTTCSSEEHHHHHHHHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCC---CEEEEEcCCCCCcee---h--hcCC-CceEeccCCCCCCCHHHHHHHHHHH
Confidence 34799999999999999999999987 799999987643110 0 0001 0111112221111001111223345
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc---EEEeCCCeEEEeccEEeccCC---CCCcCCCCCCCCc---CcEEEecCHHHHHHH
Q 012165 130 YKEKGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGC---TASRFPEKIGGYL---PGVHYIRDVADADAL 200 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~~---~v~~~~g~~~~yd~lVlAtG~---~~~~~~~~~g~~~---~~v~~~~~~~~~~~~ 200 (469)
+++.+++++++++|+.++...+ .|.+.+++ +.||+||+|||+ .|. .|.++|... ..+++ .+.+..
T Consensus 77 ~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~-~~~~~g~~~~~g~~~~~--~~~~~~-- 150 (332)
T 3lzw_A 77 MAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGAFKPR-KLELENAEQYEGKNLHY--FVDDLQ-- 150 (332)
T ss_dssp HTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSCCEEC-CCCCTTGGGGBTTTEES--SCSCGG--
T ss_pred HHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCcCCCC-CCCCCChhhccCceEEE--ecCCHH--
Confidence 5667999999999999998766 78888887 999999999999 665 455555432 23332 111111
Q ss_pred HHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEE
Q 012165 201 ISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVK 268 (469)
Q Consensus 201 ~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~ 268 (469)
...+++++|||+|.+|+|+|..|.+.+.+++ ...+.+++.||++++++.+.+++.++ + +..+.
T Consensus 151 ---~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~-~-~~~v~ 225 (332)
T 3lzw_A 151 ---KFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAHEHSVENLHASKVNVLTPFVPAELIGED-K-IEQLV 225 (332)
T ss_dssp ---GGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSSCHHHHHHHHHSSCEEETTEEEEEEECSS-S-CCEEE
T ss_pred ---HcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCccHHHHHHHhcCCeEEEeCceeeEEecCC-c-eEEEE
Confidence 1258999999999999999999999999887 22455789999999999999998542 2 33566
Q ss_pred cCC-----CCEEeCCEEEEccCCccCCchhhhcCCcccCCCEEeCCCCCCCCCceEEeccccccCCccCCcccccchHHH
Q 012165 269 LED-----GSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDH 343 (469)
Q Consensus 269 ~~~-----g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~ 343 (469)
+.+ ++++++|.||+++|++|++++++.++++.++|+|.||+++||+.|+|||+|||+..+.. ...+..
T Consensus 226 ~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~-------~~~~~~ 298 (332)
T 3lzw_A 226 LEEVKGDRKEILEIDDLIVNYGFVSSLGPIKNWGLDIEKNSIVVKSTMETNIEGFFAAGDICTYEGK-------VNLIAS 298 (332)
T ss_dssp EEETTSCCEEEEECSEEEECCCEECCCGGGGGSSCCEETTEEECCTTSBCSSTTEEECGGGEECTTC-------CCCHHH
T ss_pred EEecCCCceEEEECCEEEEeeccCCCchHHhhcCccccCCeEEeCCCCceecCCEEEccceecCCCC-------cceEee
Confidence 655 45799999999999999999999999988888999999999999999999999975432 225667
Q ss_pred HHHHHHHHHHHHhc
Q 012165 344 ARQSAQHCIKALLS 357 (469)
Q Consensus 344 A~~~a~~~a~~i~~ 357 (469)
|..+|+.+|.+|+.
T Consensus 299 A~~~g~~aa~~i~~ 312 (332)
T 3lzw_A 299 GFGEAPTAVNNAKA 312 (332)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred ehhhHHHHHHHHHH
Confidence 88899999998875
No 57
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=6.9e-36 Score=291.43 Aligned_cols=282 Identities=19% Similarity=0.259 Sum_probs=204.7
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHh
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 128 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (469)
++++||+|||||+||+++|..|++.|+ +|+|||+++.+..... ...+ .....+.+.+.............+
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~~gg~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~l~~ 73 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMRGL---SFRFVDPLPEPGGQLT-----ALYP-EKYIYDVAGFPKVYAKDLVKGLVE 73 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSSSCHHHH-----HTCT-TSEECCSTTCSSEEHHHHHHHHHH
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhCCC---CEEEEeCCCCCCCeee-----ccCC-CceeeccCCCCCCCHHHHHHHHHH
Confidence 446899999999999999999999887 7999999876431100 0000 000011111110000000112234
Q ss_pred HHHHCCcEEEeCCcEEEEeCCC--cEEEeCCCeEEEeccEEeccCCC---CCcCCCCCCCC-c--CcEEE-ecCHHHHHH
Q 012165 129 WYKEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCT---ASRFPEKIGGY-L--PGVHY-IRDVADADA 199 (469)
Q Consensus 129 ~~~~~~i~~~~~~~v~~id~~~--~~v~~~~g~~~~yd~lVlAtG~~---~~~~~~~~g~~-~--~~v~~-~~~~~~~~~ 199 (469)
.+++.+++++.+++|..++.+. .+|.+.+++++.||+||+|||+. |. .|.++|.. . .++++ +.+. .
T Consensus 74 ~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~-~~~i~g~~~~~~~~~~~~~~~~---~- 148 (335)
T 2zbw_A 74 QVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPR-RIGAPGEREFEGRGVYYAVKSK---A- 148 (335)
T ss_dssp HHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEEC-CCCCTTTTTTBTTTEESSCSCG---G-
T ss_pred HHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCCC-CCCCCChhhccCcEEEEecCch---h-
Confidence 4566789999899999998765 35777788889999999999994 44 34455532 1 12322 1111 1
Q ss_pred HHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe----------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCc
Q 012165 200 LISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT----------------RYEQLYQQNGVKFVKGASIKNLEAGSDGR 263 (469)
Q Consensus 200 ~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~----------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~ 263 (469)
...+++++|||+|.+|+|+|..|.+.+.+++ .+.+.+++.||++++++.+.+++. ++.
T Consensus 149 ----~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~~~~~~~~l~~~l~~~gv~v~~~~~v~~i~~--~~~ 222 (335)
T 2zbw_A 149 ----EFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRAHEASVKELMKAHEEGRLEVLTPYELRRVEG--DER 222 (335)
T ss_dssp ----GGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCSCHHHHHHHHHHHHTTSSEEETTEEEEEEEE--SSS
T ss_pred ----hcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCccHHHHHHHHhccccCCeEEecCCcceeEcc--CCC
Confidence 1257999999999999999999999998887 345566667999999999999986 344
Q ss_pred EEEEEcC---CC--CEEeCCEEEEccCCccCCchhhhcCCcccCCCEEeCCCCCCCCCceEEeccccccCCccCCccccc
Q 012165 264 VAAVKLE---DG--STIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARV 338 (469)
Q Consensus 264 v~~v~~~---~g--~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~ 338 (469)
+..+.+. +| +++++|.||+++|++|+++++++++++.++|+|.||+++||+.|+|||+|||+..+.. .
T Consensus 223 ~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~-------~ 295 (335)
T 2zbw_A 223 VRWAVVFHNQTQEELALEVDAVLILAGYITKLGPLANWGLALEKNKIKVDTTMATSIPGVYACGDIVTYPGK-------L 295 (335)
T ss_dssp EEEEEEEETTTCCEEEEECSEEEECCCEEEECGGGGGSCCCEETTEEECCTTCBCSSTTEEECSTTEECTTC-------C
T ss_pred eeEEEEEECCCCceEEEecCEEEEeecCCCCchHhhhcceeccCCeeeeCCCCCCCCCCEEEeccccccCcc-------h
Confidence 4456665 67 5799999999999999999999999887778999999999999999999999986532 2
Q ss_pred chHHHHHHHHHHHHHHHhc
Q 012165 339 EHVDHARQSAQHCIKALLS 357 (469)
Q Consensus 339 ~~~~~A~~~a~~~a~~i~~ 357 (469)
..+..|..+|..+|.+|.+
T Consensus 296 ~~~~~A~~~g~~aa~~i~~ 314 (335)
T 2zbw_A 296 PLIVLGFGEAAIAANHAAA 314 (335)
T ss_dssp CCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHHHH
Confidence 2566788899999999875
No 58
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=3.8e-36 Score=290.47 Aligned_cols=286 Identities=20% Similarity=0.213 Sum_probs=195.5
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCcc-ccCCCCCCCCH
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHT-CVGSGGERQTP 127 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 127 (469)
+.+|||+||||||||++||.+|+++|+ +|+|||++...... +. +.+. ......+++++.. ..+.+...+..
T Consensus 2 ~~~yDvvIIG~GpAGl~AA~~la~~g~---~v~liE~~~~gg~~-~~---G~~~-~~~~i~~~~g~~~~i~~~~l~~~~~ 73 (314)
T 4a5l_A 2 SNIHDVVIIGSGPAAHTAAIYLGRSSL---KPVMYEGFMAGGVA-AG---GQLT-TTTIIENFPGFPNGIDGNELMMNMR 73 (314)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTC---CCEEECCSSGGGCC-TT---CGGG-GSSEECCSTTCTTCEEHHHHHHHHH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC---CEEEEecCCCCCcc-cC---CCcC-ChHHhhhccCCcccCCHHHHHHHHH
Confidence 346899999999999999999999998 79999987542211 00 0010 0111122333221 11111112234
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCC--cEEEeCCCeEEEeccEEeccCCCCCcCCCCCCCCcCcEEEecCHHHHHHHHHhhh
Q 012165 128 EWYKEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE 205 (469)
Q Consensus 128 ~~~~~~~i~~~~~~~v~~id~~~--~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~ 205 (469)
+.+++.++.+... .+....... ..+.+.++.++.||+||||||++|+ .|++||.+.............+. .....
T Consensus 74 ~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~-~~~ipG~~~~~~~~~~~~~~~~~-~~~~~ 150 (314)
T 4a5l_A 74 TQSEKYGTTIITE-TIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAK-RMHVPGEDKYWQNGVSACAICDG-AVPIF 150 (314)
T ss_dssp HHHHHTTCEEECC-CEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEEC-CCCCTTHHHHBTTTEESCHHHHT-TSGGG
T ss_pred HHHhhcCcEEEEe-EEEEeecCCCceEEEECCCeEEEEeEEEEccccccc-ccCCCccccccccceeeehhhhh-hhhhc
Confidence 4566788888764 666665543 4677888889999999999999987 45666644322212221122222 22234
Q ss_pred cCCeEEEEcCChHHHHHHHHHHhCCCeEe-------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEE----
Q 012165 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTT-------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVK---- 268 (469)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~v~-------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~---- 268 (469)
.+++++|||+|++|+|+|..|+++|.+|+ ...+.....+++.+....+.++... +....++.
T Consensus 151 ~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~ 229 (314)
T 4a5l_A 151 RNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRASKTMQERVLNHPKIEVIWNSELVELEGD-GDLLNGAKIHNL 229 (314)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCSCHHHHHHHHTCTTEEEECSEEEEEEEES-SSSEEEEEEEET
T ss_pred CCCeEEEECCChHHHHHHHHHHHhCCeeeeecccccccccchhhhhhhcccceeeEeeeeeEEEEee-eeccceeEEeec
Confidence 68999999999999999999999999998 2234556678999999888888754 23233333
Q ss_pred -cCCCCEEeCCEEEEccCCccCCchhhhcCCcccCCCEEeCCCCCCCCCceEEeccccccCCccCCcccccchHHHHHHH
Q 012165 269 -LEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQS 347 (469)
Q Consensus 269 -~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~ 347 (469)
..+++++++|.|++++|++||++++... +..+++++.||+++|||+|+|||+|||+..+.. .+..|..+
T Consensus 230 ~~~~~~~i~~d~vi~a~G~~pn~~~l~~~-~~~~~~G~iv~~~~~Ts~pgIyA~GDv~~~~~~---------~~~~A~~~ 299 (314)
T 4a5l_A 230 VSGEYKVVPVAGLFYAIGHSPNSKFLGGQ-VKTADDGYILTEGPKTSVDGVFACGDVCDRVYR---------QAIVAAGS 299 (314)
T ss_dssp TTCCEEEEECSEEEECSCEEESCGGGTTS-SCBCTTSCBCCBTTBCSSTTEEECSTTTCSSCC---------CHHHHHHH
T ss_pred ccccceeeccccceEecccccChhHhccc-ceEcCCeeEeCCCCccCCCCEEEEEeccCCcch---------HHHHHHHH
Confidence 2345789999999999999999988653 555555677999999999999999999986542 23347788
Q ss_pred HHHHHHHHh
Q 012165 348 AQHCIKALL 356 (469)
Q Consensus 348 a~~~a~~i~ 356 (469)
|+.||.++.
T Consensus 300 G~~AA~~~~ 308 (314)
T 4a5l_A 300 GCMAALSCE 308 (314)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888887764
No 59
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=4.7e-35 Score=283.59 Aligned_cols=277 Identities=22% Similarity=0.244 Sum_probs=203.9
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
+++||+|||||+||+++|..|++.|+ +|+|||++ .+.. +.. ......++.+.............++
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~--~gg~-------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYML---KTLVIGET--PGGQ-------LTE--AGIVDDYLGLIEIQASDMIKVFNKH 79 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESS--TTGG-------GGG--CCEECCSTTSTTEEHHHHHHHHHHH
T ss_pred CccCEEEECccHHHHHHHHHHHHCCC---cEEEEecc--CCCe-------ecc--cccccccCCCCCCCHHHHHHHHHHH
Confidence 45899999999999999999999987 79999997 1110 000 0001111111110000111223455
Q ss_pred HHHCCcEEEeCCcEEEEeCCC--cEEEeCCCeEEEeccEEeccCCCCCcCCCCCCCCc---CcEEEecCHHHHHHHHHhh
Q 012165 130 YKEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADALISSL 204 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~--~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~---~~v~~~~~~~~~~~~~~~~ 204 (469)
+++.+++++. ++|..++.+. ..+.+.++.++.||+||+|||+.|. .|.+++... +++++.. ......
T Consensus 80 ~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~-~~~i~g~~~~~~~~~~~~~------~~~~~~ 151 (323)
T 3f8d_A 80 IEKYEVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRR-KLGVPGEQEFAGRGISYCS------VADAPL 151 (323)
T ss_dssp HHTTTCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEEC-CCCCTTTTTTBTTTEESCH------HHHGGG
T ss_pred HHHcCCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCCc-cCCCCchhhhcCCceEEec------cCCHhH
Confidence 6678999998 7999998774 3678888889999999999999986 455666543 4554321 112234
Q ss_pred hcCCeEEEEcCChHHHHHHHHHHhCCCeEe-------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCC
Q 012165 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTT-------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED 271 (469)
Q Consensus 205 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~-------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~ 271 (469)
..+++++|+|+|.+|+|+|..|.+.+.+++ .+++.+++.||++++++.+.+++.+ +.+..+.+.+
T Consensus 152 ~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~--~~~~~v~~~~ 229 (323)
T 3f8d_A 152 FKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGD--KVVKQVVVEN 229 (323)
T ss_dssp GTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCSCHHHHHHHHTCTTEEEECSEEEEEEEES--SSEEEEEEEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCcCHHHHHHHHhCCCcEEEeCCEEEEEecc--CceeEEEEEE
Confidence 568999999999999999999999999887 2233444559999999999999853 4555677765
Q ss_pred ---CC--EEeCCEEEEccCCccCCchhhhcCCccc-CCCEEeCCCCCCCCCceEEeccccccCCccCCcccccchHHHHH
Q 012165 272 ---GS--TIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHAR 345 (469)
Q Consensus 272 ---g~--~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~ 345 (469)
|+ ++++|.||+++|++|++++++.++++.+ +|+|.||++++|+.|+|||+|||+..+.. ...+..|.
T Consensus 230 ~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~g~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~-------~~~~~~A~ 302 (323)
T 3f8d_A 230 LKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLG-------FRQVITAV 302 (323)
T ss_dssp TTTCCEEEEECSEEEECCCEECCHHHHHHTTCCBCTTSSBCCCTTCBCSSTTEEECSTTBSTTTT-------CCCHHHHH
T ss_pred CCCCceEEEEcCEEEEEECCCCChhHHhhcCeeecCCCcEecCCCceecCCCEEEcceecCCCCc-------ccceeehh
Confidence 76 7999999999999999999999998865 68899999999999999999999986410 22566788
Q ss_pred HHHHHHHHHHhc
Q 012165 346 QSAQHCIKALLS 357 (469)
Q Consensus 346 ~~a~~~a~~i~~ 357 (469)
.+|+.+|.+|..
T Consensus 303 ~~g~~aa~~i~~ 314 (323)
T 3f8d_A 303 AQGAVAATSAYR 314 (323)
T ss_dssp HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHH
Confidence 888888888853
No 60
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=3e-35 Score=281.59 Aligned_cols=267 Identities=22% Similarity=0.197 Sum_probs=198.3
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (469)
++||+|||||+||+++|..|++.|+ +|+|+|+++..... +.....+. ...............+.+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~~~~~-~~~~~~~~-----------~~~~~~~~~~~~~~~~~~ 66 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARK---NILLVDAGERRNRF-ASHSHGFL-----------GQDGKAPGEIIAEARRQI 66 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC---CEEEEECCCCGGGG-CSCCCSST-----------TCTTCCHHHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC---CEEEEeCCCccccc-chhhcCCc-----------CCCCCCHHHHHHHHHHHH
Confidence 4799999999999999999999987 79999987532110 11111111 000000000011223334
Q ss_pred HHC-CcEEEeCCcEEEEeCCC--cEEEeCCCeEEEeccEEeccCCCCCcCCCCCCCCc---CcEEEecCHHHHHHHHHhh
Q 012165 131 KEK-GIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADALISSL 204 (469)
Q Consensus 131 ~~~-~i~~~~~~~v~~id~~~--~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~---~~v~~~~~~~~~~~~~~~~ 204 (469)
.+. +++++. .+|+.++++. ..|++.+++++.||+||+|||+.|+ .|.++|... .++++.. ......
T Consensus 67 ~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~-~~~~~g~~~~~~~~~~~~~------~~~~~~ 138 (297)
T 3fbs_A 67 ERYPTIHWVE-GRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDE-LPEIAGLRERWGSAVFHCP------YCHGYE 138 (297)
T ss_dssp TTCTTEEEEE-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEE-CCCCBTTGGGBTTTEESCH------HHHTGG
T ss_pred HhcCCeEEEE-eEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCC-CCCCCCchhhcCCeeEEcc------cCcchh
Confidence 444 788776 4999998765 4788888989999999999999886 466666432 3333321 111223
Q ss_pred hcCCeEEEEcCChHHHHHHHHHHhCCCeEe-----------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCC
Q 012165 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTT-----------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS 273 (469)
Q Consensus 205 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~-----------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~ 273 (469)
..+++++|||+|.+|+|+|..|.+++ +++ .+.+.+++.||+++. +.+++++.+ + .+.+++|+
T Consensus 139 ~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~~~~~~~~~l~~~gv~i~~-~~v~~i~~~--~---~v~~~~g~ 211 (297)
T 3fbs_A 139 LDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVEPDADQHALLAARGVRVET-TRIREIAGH--A---DVVLADGR 211 (297)
T ss_dssp GTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCCCCHHHHHHHHHTTCEEEC-SCEEEEETT--E---EEEETTSC
T ss_pred hcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCCCCHHHHHHHHHCCcEEEc-ceeeeeecC--C---eEEeCCCC
Confidence 46899999999999999999999998 887 456788999999996 889999742 2 57889999
Q ss_pred EEeCCEEEEccCCccCCchhhhcCCcccC---C-CEEeCCCCCCCCCceEEeccccccCCccCCcccccchHHHHHHHHH
Q 012165 274 TIDADTIVIGIGAKPTVSPFERVGLNSSV---G-GIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQ 349 (469)
Q Consensus 274 ~i~~D~vi~a~G~~p~~~~~~~~gl~~~~---g-~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~ 349 (469)
++++|.||+++|++|+++++++++++.+. | ++.||++++|+.|+|||+|||+..+. .+..|..+|+
T Consensus 212 ~~~~D~vi~a~G~~p~~~~~~~~g~~~~~~~~G~~i~vd~~~~t~~~~vya~GD~~~~~~----------~~~~A~~~g~ 281 (297)
T 3fbs_A 212 SIALAGLFTQPKLRITVDWIEKLGCAVEEGPMGSTIVTDPMKQTTARGIFACGDVARPAG----------SVALAVGDGA 281 (297)
T ss_dssp EEEESEEEECCEEECCCSCHHHHTCCEEEETTEEEECCCTTCBCSSTTEEECSGGGCTTC----------CHHHHHHHHH
T ss_pred EEEEEEEEEccCcccCchhHHhcCCccccCCCCceEEeCCCCccCCCCEEEEeecCCchH----------HHHHHHHhHH
Confidence 99999999999999999999999887653 4 79999999999999999999998633 4566888888
Q ss_pred HHHHHHhc
Q 012165 350 HCIKALLS 357 (469)
Q Consensus 350 ~~a~~i~~ 357 (469)
.+|.+|..
T Consensus 282 ~aa~~i~~ 289 (297)
T 3fbs_A 282 MAGAAAHR 289 (297)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88888753
No 61
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=1.1e-34 Score=280.96 Aligned_cols=276 Identities=25% Similarity=0.299 Sum_probs=202.0
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
+.+||+|||||+||+++|..|++.|+ +|+|+|+..... . ..... ....++++.............+.
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~gg-~-~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 81 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGF---SVAILDKAVAGG-L-TAEAP--------LVENYLGFKSIVGSELAKLFADH 81 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSTTG-G-GGGCS--------CBCCBTTBSSBCHHHHHHHHHHH
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC---cEEEEeCCCCCc-c-ccccc--------hhhhcCCCcccCHHHHHHHHHHH
Confidence 45899999999999999999999987 799999853211 0 00000 00111111000000001123345
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeCCCeEEEeccEEeccCCCCCcCCCCCCCCc---CcEEEecCHHHHHHHHHhh
Q 012165 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADALISSL 204 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~---~~v~~~~~~~~~~~~~~~~ 204 (469)
+++.+++++. .+|..++.+.. +|.+ ++.++.||+||+|||+.|+ .|.+++... .++++... .....
T Consensus 82 ~~~~~v~~~~-~~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~-~~~i~g~~~~~~~~~~~~~~------~~~~~ 152 (319)
T 3cty_A 82 AANYAKIREG-VEVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHK-HLGVKGESEYFGKGTSYCST------CDGYL 152 (319)
T ss_dssp HHTTSEEEET-CCEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEEC-CCCCBTTTTTBTTTEESCHH------HHGGG
T ss_pred HHHcCCEEEE-eeEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCcc-cCCCCChHHhCCceEEEEEe------cchhh
Confidence 5677999888 68999987665 5666 5567999999999999876 455555421 34443321 12234
Q ss_pred hcCCeEEEEcCChHHHHHHHHHHhCCCeEe------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcC--
Q 012165 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE-- 270 (469)
Q Consensus 205 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~-- 270 (469)
..+++++|||+|.+|+|+|..|.+++.+++ .+.+.+++.||+++++++++++..+ ++++..+.+.
T Consensus 153 ~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~ 231 (319)
T 3cty_A 153 FKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMCENAYVQEIKKRNIPYIMNAQVTEIVGD-GKKVTGVKYKDR 231 (319)
T ss_dssp GBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCSCHHHHHHHHHTTCCEECSEEEEEEEES-SSSEEEEEEEET
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCCCHHHHHHHhcCCcEEEcCCeEEEEecC-CceEEEEEEEEc
Confidence 568999999999999999999999998887 2456677899999999999999864 4445566664
Q ss_pred -CCC--EEeCCEEEEccCCccCCchhhhcCCccc-CCCEEeCCCCCCCCCceEEeccccccCCccCCcccccchHHHHHH
Q 012165 271 -DGS--TIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQ 346 (469)
Q Consensus 271 -~g~--~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~ 346 (469)
+|+ ++++|.||+|+|++||++++++++++.+ +|+|.||+++||+.|+|||+|||+..+. ..+..|..
T Consensus 232 ~~g~~~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~---------~~~~~A~~ 302 (319)
T 3cty_A 232 TTGEEKLIETDGVFIYVGLIPQTSFLKDSGVKLDERGYIVVDSRQRTSVPGVYAAGDVTSGNF---------AQIASAVG 302 (319)
T ss_dssp TTCCEEEECCSEEEECCCEEECCGGGTTSCCCBCTTSCBCCCTTCBCSSTTEEECSTTBTTCC---------CCHHHHHH
T ss_pred CCCceEEEecCEEEEeeCCccChHHHhhccccccCCccEeCCCCCccCCCCEEEeecccCcch---------hhHHHHHH
Confidence 675 6999999999999999999998888765 5889999999999999999999998632 14567899
Q ss_pred HHHHHHHHHhc
Q 012165 347 SAQHCIKALLS 357 (469)
Q Consensus 347 ~a~~~a~~i~~ 357 (469)
+|+.+|.+|..
T Consensus 303 ~g~~aa~~i~~ 313 (319)
T 3cty_A 303 DGCKAALSLYS 313 (319)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999864
No 62
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=100.00 E-value=1.6e-35 Score=298.36 Aligned_cols=283 Identities=20% Similarity=0.237 Sum_probs=200.8
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (469)
.++|||||||+||+++|.+|++.+. +.+|||||+++++.|. |.+.. +.... ....++ .....+++
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~-~~~VtlI~~~~~~~~~-p~l~~-v~~g~-~~~~~i-----------~~~~~~~~ 66 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMP-DLKITLISDRPYFGFT-PAFPH-LAMGW-RKFEDI-----------SVPLAPLL 66 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCT-TCEEEEECSSSEEECG-GGHHH-HHHTC-SCGGGS-----------EEESTTTG
T ss_pred CCcEEEECCCHHHHHHHHHHhccCc-CCeEEEEcCCCCCccC-ccHHH-HhcCC-CCHHHh-----------hhcHHHHH
Confidence 3689999999999999999999875 7899999999998774 65543 22111 111111 12334566
Q ss_pred HHCCcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCCcCCCCCCCCcCcEEEecCHHHHHHHHHhh---hcC
Q 012165 131 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL---EKA 207 (469)
Q Consensus 131 ~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~---~~~ 207 (469)
++.+++++.+ +|++||+++++|++++|++++||+||||||+++. + .++|.. ++.+.+.+..++.++++.+ ...
T Consensus 67 ~~~gv~~i~~-~v~~Id~~~~~V~~~~g~~i~YD~LViAtG~~~~-~-~i~G~~-e~~~~~~~~~~a~~~~~~l~~~~~~ 142 (430)
T 3hyw_A 67 PKFNIEFINE-KAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV-F-GAEGQE-ENSTSICTAEHALETQKKLQELYAN 142 (430)
T ss_dssp GGGTEEEECS-CEEEEETTTTEEEETTCCEEECSEEEECCCCEEE-C-CSBTHH-HHSCCCSSHHHHHHHHHHHHHHHHS
T ss_pred HHCCcEEEEe-EEEEEECCCCEEEECCCCEEECCEEEEeCCCCcc-C-CccCcc-cCcCCcccHHHHHHHHHHHHhhccC
Confidence 7889999885 8999999999999999999999999999999853 3 345532 3345667777777665544 345
Q ss_pred CeEEEEcCCh------HHHHHH----HHHHhCCC----eEe---------------------eeHHHHHHcCcEEEcCCe
Q 012165 208 KKVVVVGGGY------IGMEVA----AAAVGWKL----DTT---------------------RYEQLYQQNGVKFVKGAS 252 (469)
Q Consensus 208 ~~vvVvG~G~------~g~e~A----~~l~~~g~----~v~---------------------~~~~~l~~~gV~~~~~~~ 252 (469)
+.++|+|++. .+.|++ ..+.+.+. +++ .+++.++++||++++++.
T Consensus 143 ~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~GV~~~~~~~ 222 (430)
T 3hyw_A 143 PGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVA 222 (430)
T ss_dssp CCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCE
T ss_pred CceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccchhhhccchhhHHHHHHHHHHHHhCCeEEEeCce
Confidence 5566666542 233443 34455543 232 356778899999999999
Q ss_pred EEEEEeCCCCcEEEEEcCCC--CEEeCCEEEEccCCccCCchhhhcCC--ccc-CCCEEeCCCCC-CCCCceEEeccccc
Q 012165 253 IKNLEAGSDGRVAAVKLEDG--STIDADTIVIGIGAKPTVSPFERVGL--NSS-VGGIQVDGQFR-TRMPGIFAIGDVAA 326 (469)
Q Consensus 253 v~~i~~~~~~~v~~v~~~~g--~~i~~D~vi~a~G~~p~~~~~~~~gl--~~~-~g~i~Vd~~~~-t~~~~Vfa~GD~a~ 326 (469)
|++++. + .+ .+...+| +++++|++++++|.+|+ +++..+++ ..+ ++.|.||++|| |++|||||+|||+.
T Consensus 223 v~~v~~--~-~~-~~~~~~g~~~~i~~d~vi~~~G~~~~-~~~~~~~~~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~ 297 (430)
T 3hyw_A 223 VKAIEP--D-KV-IYEDLNGNTHEVPAKFTMFMPSFQGP-EVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTA 297 (430)
T ss_dssp EEEECS--S-EE-EEECTTSCEEEEECSEEEEECEEECC-HHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBC
T ss_pred EEEEeC--C-ce-EEEeeCCCceEeecceEEEeccCCCc-hHHHhcccccccCCceEEEecccccCCCCCCEEEeccEEe
Confidence 999973 2 22 2333443 57999999999999998 66666653 334 35689999999 79999999999998
Q ss_pred cCCccCCc--ccccchHHHHHHHHHHHHHHHhc
Q 012165 327 FPLKMYDR--TARVEHVDHARQSAQHCIKALLS 357 (469)
Q Consensus 327 ~~~~~~~~--~~~~~~~~~A~~~a~~~a~~i~~ 357 (469)
.|...... .......+.|.+||+.+|+||+.
T Consensus 298 ~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~ 330 (430)
T 3hyw_A 298 IPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVN 330 (430)
T ss_dssp CCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred cCCcccCcCcCccchHHHHHHHHHHHHHHHHHH
Confidence 76432111 01123456799999999999975
No 63
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=1.7e-34 Score=280.51 Aligned_cols=275 Identities=21% Similarity=0.260 Sum_probs=199.7
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCcc-ccCCCCCCCCHh
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHT-CVGSGGERQTPE 128 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 128 (469)
.++||+|||||+||+++|..|++.|+ +|+|+|+.. .+.. ..... ....++++.. ...........+
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~-~gg~-~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~ 73 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQL---STLILEKGM-PGGQ-IAWSE--------EVENFPGFPEPIAGMELAQRMHQ 73 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSC-TTGG-GGGCS--------CBCCSTTCSSCBCHHHHHHHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCC---cEEEEeCCC-CCcc-ccccc--------ccccCCCCCCCCCHHHHHHHHHH
Confidence 45899999999999999999999987 799999983 2111 00000 0001111100 000001112344
Q ss_pred HHHHCCcEEEeCCcEEEEeCC--C---cEEEeCCCeEEEeccEEeccCCCCCcCCCCCCCCc---CcEEEecCHHHHHHH
Q 012165 129 WYKEKGIEMIYQDPVTSIDIE--K---QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADAL 200 (469)
Q Consensus 129 ~~~~~~i~~~~~~~v~~id~~--~---~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~---~~v~~~~~~~~~~~~ 200 (469)
.+++.+++++. .+|..++.. + .+|.+.+|+++.||+||+|||+.|. .|.+++.+. +++++.. ..
T Consensus 74 ~~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~-~~~i~g~~~~~~~~~~~~~------~~ 145 (325)
T 2q7v_A 74 QAEKFGAKVEM-DEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPR-KLGIPGEDNFWGKGVSTCA------TC 145 (325)
T ss_dssp HHHHTTCEEEE-CCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEEC-CCCCTTTTTTBTTTEESCH------HH
T ss_pred HHHHcCCEEEe-eeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcC-CCCCCChhhccCceEEEec------cC
Confidence 56778999988 589999876 3 4677788888999999999999886 455566431 3444332 11
Q ss_pred HHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe------------eeHHHH-HHcCcEEEcCCeEEEEEeCCCCcEEEE
Q 012165 201 ISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------RYEQLY-QQNGVKFVKGASIKNLEAGSDGRVAAV 267 (469)
Q Consensus 201 ~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------~~~~~l-~~~gV~~~~~~~v~~i~~~~~~~v~~v 267 (469)
......+++++|||+|.+|+|+|..|.+++.+++ .+.+.+ ++.||+++++++++++.. ++.+..|
T Consensus 146 ~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~l~~~~gv~i~~~~~v~~i~~--~~~v~~v 223 (325)
T 2q7v_A 146 DGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRANKVAQARAFANPKMKFIWDTAVEEIQG--ADSVSGV 223 (325)
T ss_dssp HGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSCHHHHHHHHTCTTEEEECSEEEEEEEE--SSSEEEE
T ss_pred CHHHcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCcchHHHHHHHhcCCceEecCCceEEEcc--CCcEEEE
Confidence 2234568999999999999999999999999987 122334 446999999999999985 3455566
Q ss_pred EcC---CCC--EEeCCEEEEccCCccCCchhhhcCCccc-CCCEEeCCCCCCCCCceEEeccccccCCccCCcccccchH
Q 012165 268 KLE---DGS--TIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHV 341 (469)
Q Consensus 268 ~~~---~g~--~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~ 341 (469)
.+. +|+ ++++|.||+++|++||+++++++ +..+ +|+|.||++++|++|+|||+|||+..+. ..+
T Consensus 224 ~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~-~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~---------~~~ 293 (325)
T 2q7v_A 224 KLRNLKTGEVSELATDGVFIFIGHVPNTAFVKDT-VSLRDDGYVDVRDEIYTNIPMLFAAGDVSDYIY---------RQL 293 (325)
T ss_dssp EEEETTTCCEEEEECSEEEECSCEEESCGGGTTT-SCBCTTSCBCCBTTTBCSSTTEEECSTTTCSSC---------CCH
T ss_pred EEEECCCCcEEEEEcCEEEEccCCCCChHHHhhh-cccCCCccEecCCCCccCCCCEEEeecccCccH---------HHH
Confidence 665 675 79999999999999999998876 6654 6789999999999999999999998631 145
Q ss_pred HHHHHHHHHHHHHHhc
Q 012165 342 DHARQSAQHCIKALLS 357 (469)
Q Consensus 342 ~~A~~~a~~~a~~i~~ 357 (469)
..|..+|+.+|.+|..
T Consensus 294 ~~A~~~g~~aa~~i~~ 309 (325)
T 2q7v_A 294 ATSVGAGTRAAMMTER 309 (325)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6788999999998864
No 64
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=100.00 E-value=9.7e-35 Score=290.52 Aligned_cols=278 Identities=19% Similarity=0.199 Sum_probs=204.0
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (469)
.|+|||||||+||+++|.+|++.+. +.+|+|||+++++.|. |.+.. +.... .....+ ....+.+
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~-~~~Vtlie~~~~~~~~-p~~~~-v~~g~-~~~~~~------------~~~~~~~ 65 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADP-SIEVTLIEPNETYYTC-YMSNE-VIGGD-RELASL------------RVGYDGL 65 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCT-TSEEEEECSCSSEECS-TTHHH-HHHTS-SCGGGG------------EECSHHH
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCc-CCeEEEEeCCCCCCCc-cCHHH-HhcCC-CCHHHH------------hhCHHHH
Confidence 4789999999999999999999886 7799999998876443 44332 22211 111111 2344567
Q ss_pred HHCCcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCCcCCCCCCCC----cCcEEEecCHHHHHHHHHhhh-
Q 012165 131 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGY----LPGVHYIRDVADADALISSLE- 205 (469)
Q Consensus 131 ~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~----~~~v~~~~~~~~~~~~~~~~~- 205 (469)
.+.+++++.+ +|+.||++++++++.+|.++.||+||||||+++. .+.++|.. ...++.+.+..+...+.+.+.
T Consensus 66 ~~~gv~~i~~-~v~~id~~~~~v~~~~g~~i~yd~LviAtG~~~~-~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~ 143 (401)
T 3vrd_B 66 RAHGIQVVHD-SALGIDPDKKLVKTAGGAEFAYDRCVVAPGIDLL-YDKIEGYSEALAAKLPHAWKAGEQTALLRRQLES 143 (401)
T ss_dssp HHTTCEEECS-CEEEEETTTTEEEETTSCEEECSEEEECCCEEEC-GGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHH
T ss_pred HHCCCEEEEe-EEEEEEccCcEEEecccceeecceeeeccCCccc-cCCccCchhhcccCccceeccHHHHHHHHHHHHh
Confidence 7889999885 8999999999999999999999999999999886 45556643 123445556666666655443
Q ss_pred --cCCeEEEEcCC------h----HHHHHHHHHHhCC--CeEe--------------------eeHHHHHHcCcEEEcCC
Q 012165 206 --KAKKVVVVGGG------Y----IGMEVAAAAVGWK--LDTT--------------------RYEQLYQQNGVKFVKGA 251 (469)
Q Consensus 206 --~~~~vvVvG~G------~----~g~e~A~~l~~~g--~~v~--------------------~~~~~l~~~gV~~~~~~ 251 (469)
.+..+++.+++ . .+++++..+.+.+ .+++ .+.+.+++.||++++++
T Consensus 144 ~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~ 223 (401)
T 3vrd_B 144 MDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQTFSKQAQFTKGWERLYGFGTENALIEWHPGP 223 (401)
T ss_dssp SCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSSSCTTHHHHHHHHHHHSCTTSTTCSEEEECTT
T ss_pred cccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEcccccccccccccHHHHHHHHHHHHhcCcEEEeCc
Confidence 34444444321 1 3456666666655 3444 22334567899999999
Q ss_pred eEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCchhhhcCCcccCCCEEeCCC-CC-CCCCceEEecccccc-C
Q 012165 252 SIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQ-FR-TRMPGIFAIGDVAAF-P 328 (469)
Q Consensus 252 ~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~Vd~~-~~-t~~~~Vfa~GD~a~~-~ 328 (469)
++..++.+.++. .+.+++|+++++|++++++|.+|+ .+++++++..++|+|.||++ +| |++|||||+|||+.. +
T Consensus 224 ~v~~v~~~~~~~--~v~~~~g~~i~~D~vi~~~g~~~~-~~~~~~gl~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~ 300 (401)
T 3vrd_B 224 DAAVVKTDTEAM--TVETSFGETFKAAVINLIPPQRAG-KIAQSASLTNDSGWCPVDIRTFESSLQPGIHVIGDACNAAP 300 (401)
T ss_dssp TTCEEEEETTTT--EEEETTSCEEECSEEEECCCEEEC-HHHHHTTCCCTTSSBCBCTTTCBBSSSTTEEECGGGBCCTT
T ss_pred eEEEEEecccce--EEEcCCCcEEEeeEEEEecCcCCc-hhHhhccccccCCCEEECCCcceecCCCCEEEecccccCCC
Confidence 999988654443 578899999999999999999998 78899999877889999986 65 689999999999864 2
Q ss_pred CccCCcccccchHHHHHHHHHHHHHHHhc
Q 012165 329 LKMYDRTARVEHVDHARQSAQHCIKALLS 357 (469)
Q Consensus 329 ~~~~~~~~~~~~~~~A~~~a~~~a~~i~~ 357 (469)
.+ .....|..||+.+|+||+.
T Consensus 301 ~p--------k~a~~A~~qa~v~A~ni~~ 321 (401)
T 3vrd_B 301 MP--------KSAYSANSQAKVAAAAVVA 321 (401)
T ss_dssp SC--------BSHHHHHHHHHHHHHHHHH
T ss_pred CC--------chHHHHHHHHHHHHHHHHH
Confidence 22 2455689999999999864
No 65
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=2.2e-35 Score=284.08 Aligned_cols=272 Identities=14% Similarity=0.122 Sum_probs=190.6
Q ss_pred CCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccc---cCCCCCC
Q 012165 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTC---VGSGGER 124 (469)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 124 (469)
.|+++||+||||||||++||.+|++.|+ +|+|+|++...+ .+.. +++++... ...+...
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~---~v~lie~~~~gg----~~~~-----------~~~~~~~~~~~~~~~~~~ 64 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARK---QIALFDNNTNRN----RVTQ-----------NSHGFITRDGIKPEEFKE 64 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTC---CEEEEECSCCGG----GGSS-----------CBCCSTTCTTBCHHHHHH
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCC---CEEEEeCCCCCC----eeee-----------ecCCccCCCCCCHHHHHH
Confidence 4667999999999999999999999987 799999874321 0000 01111000 0000000
Q ss_pred CCHhHHHHC-CcEEEeCCcEEEEeCC---CcEEEeCCCeEEEeccEEeccCCCCCcCCCCCCCCc---CcEEEecCHHHH
Q 012165 125 QTPEWYKEK-GIEMIYQDPVTSIDIE---KQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADA 197 (469)
Q Consensus 125 ~~~~~~~~~-~i~~~~~~~v~~id~~---~~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~---~~v~~~~~~~~~ 197 (469)
...+.+.++ ++.+.. ..+..++.. .+++.+.+|+++.||+||||||++|+ .|+++|.+. .++++.
T Consensus 65 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~-~p~i~G~~~~~~~~v~~~------ 136 (304)
T 4fk1_A 65 IGLNEVMKYPSVHYYE-KTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQEE-FPSIPNVREYYGKSLFSC------ 136 (304)
T ss_dssp HHHHHHTTSTTEEEEE-CCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEEE-CCSCTTHHHHBTTTEESC------
T ss_pred HHHHHHHhcCCEEEEe-eEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCccc-cccccCccccccceeeec------
Confidence 111222333 345554 456655432 35788999999999999999999987 566666321 233332
Q ss_pred HHHHHhhhcCCeEEEEcCCh-HHHHHHHHHHhCCCeEe----------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEE
Q 012165 198 DALISSLEKAKKVVVVGGGY-IGMEVAAAAVGWKLDTT----------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAA 266 (469)
Q Consensus 198 ~~~~~~~~~~~~vvVvG~G~-~g~e~A~~l~~~g~~v~----------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~ 266 (469)
.........+++++|||||. .++|+|..+...+.+++ .+.+.+++.|++++.+. +..+.. +++.+..
T Consensus 137 ~~~~~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~~~~~~~~l~~~g~~~~~~~-v~~~~~-~~~~~~~ 214 (304)
T 4fk1_A 137 PYCDGWELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNELSQTIMDELSNKNIPVITES-IRTLQG-EGGYLKK 214 (304)
T ss_dssp HHHHSGGGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCCCHHHHHHHHTTTCCEECSC-EEEEES-GGGCCCE
T ss_pred cccchhHhcCCceeeecCCCchhhhHHHHHHhCCceEEEEeccccchhhhhhhhhccceeEeeee-EEEeec-CCCeeee
Confidence 22223344677888888775 56889999999998887 45677889999999874 777763 3566678
Q ss_pred EEcCCCCEEeCCEEEEccCCccCCchhhhcCCccc-CCCEEeCCCCCCCCCceEEeccccccCCccCCcccccchHHHHH
Q 012165 267 VKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHAR 345 (469)
Q Consensus 267 v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~ 345 (469)
+++++|+++++|.++++.|.+|++.+++++|++.+ +|+|.||+++|||+|+|||+|||+..+.. .+..|.
T Consensus 215 v~~~~g~~i~~~~~vi~~g~~~~~~~~~~~g~~~~~~G~I~vd~~~~Ts~p~IyA~GDv~~~~~~---------~~~~A~ 285 (304)
T 4fk1_A 215 VEFHSGLRIERAGGFIVPTFFRPNQFIEQLGCELQSNGTFVIDDFGRTSEKNIYLAGETTTQGPS---------SLIIAA 285 (304)
T ss_dssp EEETTSCEECCCEEEECCEEECSSCHHHHTTCCCCTTSSSCSSTTCBCSSTTEEECSHHHHTSCC---------CHHHHH
T ss_pred eeccccceeeecceeeeeccccCChhhhhcCeEECCCCCEEECcCCccCCCCEEEEeccCCCcch---------HHHHHH
Confidence 99999999999999999888888889999999876 56799999999999999999999975432 344578
Q ss_pred HHHHHHHHHHh
Q 012165 346 QSAQHCIKALL 356 (469)
Q Consensus 346 ~~a~~~a~~i~ 356 (469)
.+|+.||..|.
T Consensus 286 ~~G~~AA~~i~ 296 (304)
T 4fk1_A 286 SQGNKAAIAIN 296 (304)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888887764
No 66
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=9.4e-35 Score=280.24 Aligned_cols=274 Identities=23% Similarity=0.307 Sum_probs=199.0
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC-CCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE-RPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
++||+|||||+||+++|..|++.|+ +|+|||+.....+. .+.+. .++...............++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~---~v~li~~~~gG~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~ 65 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGI---RTGLMGERFGGQILDTVDIE------------NYISVPKTEGQKLAGALKVH 65 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTC---CEEEECSSTTGGGGGCCEEC------------CBTTBSSEEHHHHHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC---cEEEEeCCCCceeccccccc------------cccCcCCCCHHHHHHHHHHH
Confidence 3699999999999999999999987 79999764210000 00000 00000000000001123345
Q ss_pred HHHCCcEEEeCCcEEEEeCC-----CcEEEeCCCeEEEeccEEeccCCCCCcCCCCCCCC---cCcEEEecCHHHHHHHH
Q 012165 130 YKEKGIEMIYQDPVTSIDIE-----KQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADADALI 201 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~-----~~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~---~~~v~~~~~~~~~~~~~ 201 (469)
+++.+++++.+++|..++++ ...|.+++|+++.||+||+|||+.|. .|.++|.+ .+++++. ..+.
T Consensus 66 ~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~-~~~~~g~~~~~~~~~~~~------~~~~ 138 (310)
T 1fl2_A 66 VDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWR-NMNVPGEDQYRTKGVTYC------PHCD 138 (310)
T ss_dssp HHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEEC-CCCCTTTTTTBTTTEESC------HHHH
T ss_pred HHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcC-CCCCCChhhcccceeEEe------ccCc
Confidence 66789999998899999865 35788888888999999999999876 45555542 1334332 1223
Q ss_pred HhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe------------eeHHHHHH-cCcEEEcCCeEEEEEeCCCCcEEEEE
Q 012165 202 SSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------RYEQLYQQ-NGVKFVKGASIKNLEAGSDGRVAAVK 268 (469)
Q Consensus 202 ~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------~~~~~l~~-~gV~~~~~~~v~~i~~~~~~~v~~v~ 268 (469)
.....+++++|||+|.+|+|+|..|++.+.+++ .+.+.+++ .||+++++++++++..+ ++++..+.
T Consensus 139 ~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~l~~~~gv~v~~~~~v~~i~~~-~~~v~~v~ 217 (310)
T 1fl2_A 139 GPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQDKLRSLKNVDIILNAQTTEVKGD-GSKVVGLE 217 (310)
T ss_dssp GGGGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCCSCHHHHHHHHTCTTEEEESSEEEEEEEES-SSSEEEEE
T ss_pred HhhcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccCccHHHHHHHhhCCCeEEecCCceEEEEcC-CCcEEEEE
Confidence 345578999999999999999999999999887 23455666 69999999999999854 45555666
Q ss_pred cCC---CC--EEeCCEEEEccCCccCCchhhhcCCccc-CCCEEeCCCCCCCCCceEEeccccccCCccCCcccccchHH
Q 012165 269 LED---GS--TIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVD 342 (469)
Q Consensus 269 ~~~---g~--~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~ 342 (469)
+.+ |+ ++++|.||+++|++||++++++. +..+ +|+|.||+++||+.|+|||+|||+..+.. .+.
T Consensus 218 ~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~-l~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~---------~~~ 287 (310)
T 1fl2_A 218 YRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGA-VERNRMGEIIIDAKCETNVKGVFAAGDCTTVPYK---------QII 287 (310)
T ss_dssp EEETTTCCEEEEECSEEEECSCEEESCGGGTTT-SCBCTTSCBCCCTTCBCSSTTEEECSTTBSCSSC---------CHH
T ss_pred EEECCCCcEEEEEcCEEEEeeCCccCchHHhcc-ccccCCCcEEcCCCCccCCCCEEEeecccCCcch---------hhh
Confidence 653 53 68999999999999999888764 6654 57899999999999999999999986532 445
Q ss_pred HHHHHHHHHHHHHhc
Q 012165 343 HARQSAQHCIKALLS 357 (469)
Q Consensus 343 ~A~~~a~~~a~~i~~ 357 (469)
.|..+|+.+|.+|..
T Consensus 288 ~A~~~g~~aa~~i~~ 302 (310)
T 1fl2_A 288 IATGEGAKASLSAFD 302 (310)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred hhHhhHHHHHHHHHH
Confidence 688888888888863
No 67
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=3e-34 Score=276.83 Aligned_cols=277 Identities=18% Similarity=0.222 Sum_probs=200.6
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCcc-ccCCCCCCCCHhH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHT-CVGSGGERQTPEW 129 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 129 (469)
++||+|||||+||+++|..|++.|+ + +|+|+|++..... + ... .....++++.. ...........++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~-~-~v~lie~~~~gg~----~----~~~--~~~~~~~~~~~~~~~~~~~~~l~~~ 68 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATRGGV-K-NAVLFEKGMPGGQ----I----TGS--SEIENYPGVKEVVSGLDFMQPWQEQ 68 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC-S-SEEEECSSSTTCG----G----GGC--SCBCCSTTCCSCBCHHHHHHHHHHH
T ss_pred CceEEEECccHHHHHHHHHHHHCCC-C-cEEEEcCCCCCcc----c----ccc--cccccCCCCcccCCHHHHHHHHHHH
Confidence 3699999999999999999999876 2 7999998632110 0 000 00001111100 0000001122344
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeCCCeEEEeccEEeccCCCCCcCCCCCCCCc---CcEEEecCHHHHHHHHHhh
Q 012165 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADALISSL 204 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~---~~v~~~~~~~~~~~~~~~~ 204 (469)
+++.+++++. .+|..++.+.. +|.+.+++++.||+||+|||+.|+ .|.++|... ++++++.. .....
T Consensus 69 ~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~-~~~~~g~~~~~~~~~~~~~~------~~~~~ 140 (311)
T 2q0l_A 69 CFRFGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPK-RTGIKGESEYWGKGVSTCAT------CDGFF 140 (311)
T ss_dssp HHTTSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEEC-CCCCBTHHHHBTTTEESCHH------HHGGG
T ss_pred HHHcCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCC-CCCCCChhhccCCcEEEeec------CChhh
Confidence 5677999988 68999987766 677788888999999999999886 455555321 34444321 12234
Q ss_pred hcCCeEEEEcCChHHHHHHHHHHhCCCeEe------------eeHHHHH-HcCcEEEcCCeEEEEEeCCCCcEEEEEcC-
Q 012165 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------RYEQLYQ-QNGVKFVKGASIKNLEAGSDGRVAAVKLE- 270 (469)
Q Consensus 205 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------~~~~~l~-~~gV~~~~~~~v~~i~~~~~~~v~~v~~~- 270 (469)
..+++++|||+|.+|+|+|..|.+++.+++ .+.+.+. +.||++++++.++++..+ ++.+..+.+.
T Consensus 141 ~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~l~~~~gv~v~~~~~v~~i~~~-~~~v~~v~~~~ 219 (311)
T 2q0l_A 141 YKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRCAPITLEHAKNNDKIEFLTPYVVEEIKGD-ASGVSSLSIKN 219 (311)
T ss_dssp GTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCCSCHHHHHHHHTCTTEEEETTEEEEEEEEE-TTEEEEEEEEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccCCCHHHHHHHhhCCCeEEEeCCEEEEEECC-CCcEeEEEEEe
Confidence 568999999999999999999999999987 2234444 479999999999999854 3445456665
Q ss_pred --CCC--EEeCCEEEEccCCccCCchhhhcC----Cccc-CCCEEeCCCCCCCCCceEEeccccccCCccCCcccccchH
Q 012165 271 --DGS--TIDADTIVIGIGAKPTVSPFERVG----LNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHV 341 (469)
Q Consensus 271 --~g~--~i~~D~vi~a~G~~p~~~~~~~~g----l~~~-~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~ 341 (469)
+|+ ++++|.||+++|++|++++++..+ +..+ +|+|.||+++||++|+|||+|||+..+. ..+
T Consensus 220 ~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~l~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~---------~~~ 290 (311)
T 2q0l_A 220 TATNEKRELVVPGFFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDFSMKTNVQGLFAAGDIRIFAP---------KQV 290 (311)
T ss_dssp TTTCCEEEEECSEEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBCSSTTEEECSTTBTTCC---------CCH
T ss_pred cCCCceEEEecCEEEEEecCccChhhhhcccccceeEeccCCCEEeCCccccCCCCeEEcccccCcch---------HHH
Confidence 675 799999999999999999988775 7665 5889999999999999999999998631 156
Q ss_pred HHHHHHHHHHHHHHhc
Q 012165 342 DHARQSAQHCIKALLS 357 (469)
Q Consensus 342 ~~A~~~a~~~a~~i~~ 357 (469)
..|..+|+.+|.+|..
T Consensus 291 ~~A~~~g~~aa~~i~~ 306 (311)
T 2q0l_A 291 VCAASDGATAALSVIS 306 (311)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHH
Confidence 6799999999999863
No 68
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=2.7e-34 Score=277.36 Aligned_cols=276 Identities=21% Similarity=0.209 Sum_probs=197.9
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEE-EcCCCCCCCCCCCCcccccCCCCCCCCCCCCCc-cccCCCCCCCCH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCI-VSKEAYAPYERPALTKGYLFPLDKKPARLPGFH-TCVGSGGERQTP 127 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~v-ie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 127 (469)
.++||+|||||+||+++|..|++.|+ +|+| +|+.. ++.. +... .....+|++. ............
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~li~e~~~-~gG~-------~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 69 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGL---KNVVMFEKGM-PGGQ-------ITSS--SEIENYPGVAQVMDGISFMAPWS 69 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTC---SCEEEECSSS-TTGG-------GGGC--SCBCCSTTCCSCBCHHHHHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCC---CeEEEEeCCC-CCce-------eeee--ceeccCCCCCCCCCHHHHHHHHH
Confidence 46899999999999999999999987 6888 99843 2110 0000 0001111111 000000112234
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCC----cEEEeCCCeEEEeccEEeccCCCCCcCCCCCCCCc---CcEEEecCHHHHHHH
Q 012165 128 EWYKEKGIEMIYQDPVTSIDIEK----QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADAL 200 (469)
Q Consensus 128 ~~~~~~~i~~~~~~~v~~id~~~----~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~---~~v~~~~~~~~~~~~ 200 (469)
+++++.+++++.+ +|..+ .+. ..+.+..+.++.||+||+|||+.|. .|.++|... +++++. ...
T Consensus 70 ~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~~~~~d~lvlAtG~~~~-~~~~~g~~~~~~~~~~~~------~~~ 140 (315)
T 3r9u_A 70 EQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGKTELAKAVIVCTGSAPK-KAGFKGEDEFFGKGVSTC------ATC 140 (315)
T ss_dssp HHHTTTCCEEECC-CEEEE-EECTTSCEEEEETTSCEEEEEEEEECCCEEEC-CCCCBTTTTTBTTTEESC------HHH
T ss_pred HHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCCEEEeCEEEEeeCCCCC-CCCCCChhhcCCCeEEee------ecc
Confidence 4556789999987 89888 443 3421433338999999999999876 565666543 444433 222
Q ss_pred HHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe-------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEE
Q 012165 201 ISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT-------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAV 267 (469)
Q Consensus 201 ~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~-------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v 267 (469)
......+++++|||+|.+|+|+|..|.+++.+++ .+.+.+++.||++++++.+.+++.+ ++.+..+
T Consensus 141 ~~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~-~~~~~~v 219 (315)
T 3r9u_A 141 DGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRAAPSTVEKVKKNEKIELITSASVDEVYGD-KMGVAGV 219 (315)
T ss_dssp HGGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBSCHHHHHHHHHCTTEEEECSCEEEEEEEE-TTEEEEE
T ss_pred cccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCCCHHHHHHHHhcCCeEEEeCcEEEEEEcC-CCcEEEE
Confidence 3334578999999999999999999999999887 2355667899999999999999854 4455566
Q ss_pred EcC--CCC--EEeCCEEEEccCCccCCchhhh---cC-Cccc-CCCEEeCCCCCCCCCceEEeccccccCCccCCccccc
Q 012165 268 KLE--DGS--TIDADTIVIGIGAKPTVSPFER---VG-LNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARV 338 (469)
Q Consensus 268 ~~~--~g~--~i~~D~vi~a~G~~p~~~~~~~---~g-l~~~-~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~ 338 (469)
.+. +|+ ++++|.||+++|.+|++.+++. +| +..+ +|+|.||+++||+.|+|||+|||+..+.
T Consensus 220 ~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd~~~~t~~~~v~a~GD~~~~~~--------- 290 (315)
T 3r9u_A 220 KVKLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQTSVAGLFAAGDLRKDAP--------- 290 (315)
T ss_dssp EEECTTSCEEEECCSCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBCSSTTEEECGGGBTTCC---------
T ss_pred EEEcCCCCeEEeecCeEEEEEcCCCCchhhhcccccceeeecCCCcEEeCCCcccCCCCEEEeecccCCch---------
Confidence 665 786 7999999999999999988766 54 7765 5889999999999999999999986432
Q ss_pred chHHHHHHHHHHHHHHHhc
Q 012165 339 EHVDHARQSAQHCIKALLS 357 (469)
Q Consensus 339 ~~~~~A~~~a~~~a~~i~~ 357 (469)
..+..|..+|+.+|.+|..
T Consensus 291 ~~~~~A~~~g~~aa~~i~~ 309 (315)
T 3r9u_A 291 KQVICAAGDGAVAALSAMA 309 (315)
T ss_dssp CCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhHHhhHHHHHHHHHH
Confidence 2566788999999988863
No 69
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=1.6e-34 Score=281.70 Aligned_cols=284 Identities=18% Similarity=0.223 Sum_probs=200.3
Q ss_pred CCCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCcc-ccCCCCCCC
Q 012165 47 FANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHT-CVGSGGERQ 125 (469)
Q Consensus 47 ~~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 125 (469)
...+++||+|||||+||+++|..|++.|+ +|+|+|+.+..... + .. .+.. ......+|++.. .........
T Consensus 18 ~~~~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~vie~~~~~~~~-~--gg-~~~~-~~~~~~~~~~~~~~~~~~~~~~ 89 (338)
T 3itj_A 18 GSHVHNKVTIIGSGPAAHTAAIYLARAEI---KPILYEGMMANGIA-A--GG-QLTT-TTEIENFPGFPDGLTGSELMDR 89 (338)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHHTTC---CCEEECCSSBTTBC-T--TC-GGGG-SSEECCSTTCTTCEEHHHHHHH
T ss_pred CCCCCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEecCCCCCCC-c--Cc-cccc-chhhcccCCCcccCCHHHHHHH
Confidence 34556899999999999999999999987 79999996521111 0 00 1100 000111122110 000011123
Q ss_pred CHhHHHHCCcEEEeCCcEEEEeCCCcEEEe-----CCCeEEEeccEEeccCCCCCcCCCCCCCC---cCcEEEecCHHHH
Q 012165 126 TPEWYKEKGIEMIYQDPVTSIDIEKQTLIT-----NSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADA 197 (469)
Q Consensus 126 ~~~~~~~~~i~~~~~~~v~~id~~~~~v~~-----~~g~~~~yd~lVlAtG~~~~~~~~~~g~~---~~~v~~~~~~~~~ 197 (469)
..+++++.+++++.++ |..++.+...+.+ .++.++.||+||+|||+.+. .|.++|.. ..++.+.
T Consensus 90 ~~~~~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~-~~~~~g~~~~~~~~~~~~------ 161 (338)
T 3itj_A 90 MREQSTKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAK-RMHLPGEETYWQKGISAC------ 161 (338)
T ss_dssp HHHHHHHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEEC-CCCCTTHHHHBTTTEESC------
T ss_pred HHHHHHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcC-CCCCCCchhccCccEEEc------
Confidence 3456677899999986 9999988765544 46778999999999999876 45555532 1233322
Q ss_pred HHHHHh--hhcCCeEEEEcCChHHHHHHHHHHhCCCeEe------------eeHHHHHHc-CcEEEcCCeEEEEEeCCCC
Q 012165 198 DALISS--LEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------RYEQLYQQN-GVKFVKGASIKNLEAGSDG 262 (469)
Q Consensus 198 ~~~~~~--~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------~~~~~l~~~-gV~~~~~~~v~~i~~~~~~ 262 (469)
...... ...+++++|||+|.+|+|+|..|.+++.+++ .+.+.+.+. ||++++++.+.+++.+ ++
T Consensus 162 ~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~~~~~~~~l~~~~gv~i~~~~~v~~i~~~-~~ 240 (338)
T 3itj_A 162 AVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRASTIMQKRAEKNEKIEILYNTVALEAKGD-GK 240 (338)
T ss_dssp HHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCSCHHHHHHHHHCTTEEEECSEEEEEEEES-SS
T ss_pred hhcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCCCHHHHHHHHhcCCeEEeecceeEEEEcc-cC
Confidence 112222 3468999999999999999999999999988 234455554 9999999999999864 44
Q ss_pred cEEEEEcCC-----CCEEeCCEEEEccCCccCCchhhhcCCccc-CCCEEe-CCCCCCCCCceEEeccccccCCccCCcc
Q 012165 263 RVAAVKLED-----GSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQV-DGQFRTRMPGIFAIGDVAAFPLKMYDRT 335 (469)
Q Consensus 263 ~v~~v~~~~-----g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~V-d~~~~t~~~~Vfa~GD~a~~~~~~~~~~ 335 (469)
.+..|.+.+ ++++++|.||+++|++|+..+++. ++..+ +|++.| |++++|+.|+|||+|||+..+.
T Consensus 241 ~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~-~l~~~~~G~i~v~~~~~~t~~~~vya~GD~~~~~~------ 313 (338)
T 3itj_A 241 LLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAG-QVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKY------ 313 (338)
T ss_dssp SEEEEEEEETTTTEEEEEECSEEEECSCEEECCGGGBT-TBCBCTTSCBCCCTTSSBCSSTTEEECGGGGCSSC------
T ss_pred cEEEEEEEECCCCceEEEEeCEEEEEeCCCCChhHhhC-ceEecCCCcEEEcCcccccCCCCEEEeeccCCCCc------
Confidence 555677765 467999999999999999988876 78765 677874 8899999999999999997432
Q ss_pred cccchHHHHHHHHHHHHHHHhc
Q 012165 336 ARVEHVDHARQSAQHCIKALLS 357 (469)
Q Consensus 336 ~~~~~~~~A~~~a~~~a~~i~~ 357 (469)
..+..|..+|+.+|.+|..
T Consensus 314 ---~~~~~A~~~g~~aa~~i~~ 332 (338)
T 3itj_A 314 ---RQAITSAGSGCMAALDAEK 332 (338)
T ss_dssp ---CCHHHHHHHHHHHHHHHHH
T ss_pred ---cceeeehhhhHHHHHHHHH
Confidence 2456788899999988864
No 70
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=100.00 E-value=5.9e-34 Score=287.76 Aligned_cols=285 Identities=19% Similarity=0.207 Sum_probs=207.1
Q ss_pred CCcEEEEcCcHHHHHHHHHHHH---cCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCH
Q 012165 51 NREFVIVGGGNAAGYAARTFVE---HGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~---~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (469)
++||||||||+||+++|..|++ .++ +|+|||+++.+.|. |.+.. +... .....++ .....
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~---~Vtlie~~~~~~~~-~~~~~-~~~g-~~~~~~~-----------~~~l~ 66 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGH---EVTLISANDYFQFV-PSNPW-VGVG-WKERDDI-----------AFPIR 66 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGS---EEEEECSSSEEECG-GGHHH-HHHT-SSCHHHH-----------EEECH
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcC---EEEEEeCCCCCccc-CCccc-cccC-ccCHHHH-----------HHHHH
Confidence 5799999999999999999999 555 89999999987664 32221 1111 0001111 23456
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCCcCCCCCCCCc--CcEEEecCHHHHHHHHHhhh
Q 012165 128 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL--PGVHYIRDVADADALISSLE 205 (469)
Q Consensus 128 ~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~--~~v~~~~~~~~~~~~~~~~~ 205 (469)
+++++.+++++. .+|+.++++.++|++++++++.||+||+|||++++ .|.++|... ...+.+.+..+...+.+.+.
T Consensus 67 ~~~~~~gv~~~~-~~v~~id~~~~~V~~~~g~~i~~d~lviAtG~~~~-~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~ 144 (437)
T 3sx6_A 67 HYVERKGIHFIA-QSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLA-FENVPGSDPHEGPVQSICTVDHAERAFAEYQ 144 (437)
T ss_dssp HHHHTTTCEEEC-SCEEEEETTTTEEEETTSCEEECSEEEECCCCEEC-GGGSTTCSTTTSSEECCSSHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEE-eEEEEEEcCCCEEEECCCCEEECCEEEECCCCCcC-cccCCCCCcccCcceecccccHHHHHHHHHH
Confidence 778889999986 59999999999999999999999999999999986 456677543 24556667777766654332
Q ss_pred ---cCCeEEEEcCChH----H--HHHH----HHHHhCCCe-----Ee---------------------eeHHHHHHcCcE
Q 012165 206 ---KAKKVVVVGGGYI----G--MEVA----AAAVGWKLD-----TT---------------------RYEQLYQQNGVK 246 (469)
Q Consensus 206 ---~~~~vvVvG~G~~----g--~e~A----~~l~~~g~~-----v~---------------------~~~~~l~~~gV~ 246 (469)
.+++++|||+|.. | +|+| ..+.++|.+ ++ .+.+.+++.||+
T Consensus 145 ~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l~~~~~~~~~~~~~l~~~gI~ 224 (437)
T 3sx6_A 145 ALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLKEEGIE 224 (437)
T ss_dssp HHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTTTTCCTTHHHHHHHHHHHTTCE
T ss_pred HHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccccCcchHHHHHHHHHHHHCCCE
Confidence 2556788888554 4 7877 556677754 54 345778899999
Q ss_pred EEcCCeEEEEEeCCCCcEEEEEcCC-----CCEEeCCEEEEccCCccCCchhhhcCCcccCCCEEeCCCCCC-CCCceEE
Q 012165 247 FVKGASIKNLEAGSDGRVAAVKLED-----GSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRT-RMPGIFA 320 (469)
Q Consensus 247 ~~~~~~v~~i~~~~~~~v~~v~~~~-----g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~Vd~~~~t-~~~~Vfa 320 (469)
+++++.+++++. ++........+ ++++++|.+++++|++++..+.+..++..++|+|.||+++|| ++|||||
T Consensus 225 ~~~~~~v~~v~~--~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~~~~~~gl~~~~G~i~Vd~~l~t~~~~~Ifa 302 (437)
T 3sx6_A 225 AYTNCKVTKVED--NKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGLCNPGGFVLVDEHQRSKKYANIFA 302 (437)
T ss_dssp EECSEEEEEEET--TEEEEEEECTTSCEEEEEEEECSEEEEECCEECCHHHHTSTTTBCTTSCBCBCTTSBBSSCTTEEE
T ss_pred EEcCCEEEEEEC--CeEEEEecccCCccccceEEEEeEEEEcCCCcCchhhhccccccCCCCcEEeChhccCCCCCCEEE
Confidence 999999999973 22211112233 567999999999999988555444677656788999999999 9999999
Q ss_pred eccccccCCccCCcc---cccchHHHHHHHHHHHHHHHhc
Q 012165 321 IGDVAAFPLKMYDRT---ARVEHVDHARQSAQHCIKALLS 357 (469)
Q Consensus 321 ~GD~a~~~~~~~~~~---~~~~~~~~A~~~a~~~a~~i~~ 357 (469)
+|||+..+... +.. ........|..||+.+|+||..
T Consensus 303 ~GD~~~~~~~~-~~~~~~~~pk~~~~A~~qg~~aA~ni~~ 341 (437)
T 3sx6_A 303 AGIAIAIPPVE-TTPVPTGAPKTGYMIESMVSAAVHNIKA 341 (437)
T ss_dssp CGGGBCCCCSC-CCSSCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccCCcC-CCcCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 99999876421 110 1123566799999999999974
No 71
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=6.2e-34 Score=275.73 Aligned_cols=276 Identities=19% Similarity=0.257 Sum_probs=196.4
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCcc-ccCCCCCCCCHh
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHT-CVGSGGERQTPE 128 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 128 (469)
+++||+|||||+||+++|..|++.|+ +|+|+|+... ... +... .....+|.+.. ............
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~-gg~-------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 70 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANL---QPVLITGMEK-GGQ-------LTTT--TEVENWPGDPNDLTGPLLMERMHE 70 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTC---CCEEECCSST-TGG-------GGGC--SBCCCSTTCCSSCBHHHHHHHHHH
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCC---cEEEEccCCC-Cce-------Eecc--hhhhhCCCCCCCCCHHHHHHHHHH
Confidence 45799999999999999999999987 7999996421 100 0000 00011111110 000000112334
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCcEEE-eCCCeEEEeccEEeccCCCCCcCCCCCCCC---cCcEEEecCHHHHHHHHHhh
Q 012165 129 WYKEKGIEMIYQDPVTSIDIEKQTLI-TNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADADALISSL 204 (469)
Q Consensus 129 ~~~~~~i~~~~~~~v~~id~~~~~v~-~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~---~~~v~~~~~~~~~~~~~~~~ 204 (469)
++.+.+++++.+ ++..++.....++ +.++.++.||+||+|||+.|. .|.+++.. ..++++.. .....+
T Consensus 71 ~~~~~~~~~~~~-~v~~i~~~~~~~~v~~~~~~~~~~~lv~AtG~~~~-~~~~~g~~~~~~~~~~~~~------~~~~~~ 142 (320)
T 1trb_A 71 HATKFETEIIFD-HINKVDLQNRPFRLNGDNGEYTCDALIIATGASAR-YLGLPSEEAFKGRGVSACA------TSDGFF 142 (320)
T ss_dssp HHHHTTCEEECC-CEEEEECSSSSEEEEESSCEEEEEEEEECCCEEEC-CCCCHHHHHTBTTTEESCH------HHHGGG
T ss_pred HHHHCCCEEEEe-eeeEEEecCCEEEEEeCCCEEEcCEEEECCCCCcC-CCCCCChHHhCCceeEecc------cCCccc
Confidence 567789999987 5999988665443 567778999999999999876 45444421 12343322 122234
Q ss_pred hcCCeEEEEcCChHHHHHHHHHHhCCCeEe----------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEE
Q 012165 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTT----------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVK 268 (469)
Q Consensus 205 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~----------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~ 268 (469)
..+++++|||+|.+|+|+|..|.+++.+++ .+.+.+++.||++++++.+++++.+ ++.+.+|.
T Consensus 143 ~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~~v~ 221 (320)
T 1trb_A 143 YRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGD-QMGVTGVR 221 (320)
T ss_dssp GTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCCCHHHHHHHHHHHHTSSEEEECSCEEEEEEEC-SSSEEEEE
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccccCHHHHHHHHHhcccCCeEEEcCceeEEEEcC-CCceEEEE
Confidence 578999999999999999999999999887 2344556689999999999999864 44565677
Q ss_pred cCC----C--CEEeCCEEEEccCCccCCchhhhcCCcccCCCEEeCCCC-----CCCCCceEEeccccccCCccCCcccc
Q 012165 269 LED----G--STIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQF-----RTRMPGIFAIGDVAAFPLKMYDRTAR 337 (469)
Q Consensus 269 ~~~----g--~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~Vd~~~-----~t~~~~Vfa~GD~a~~~~~~~~~~~~ 337 (469)
+.+ | +++++|.||+|+|++|++++++ .++..++|++.||+++ +|++|+|||+|||+..+..
T Consensus 222 ~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~~-~~l~~~~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~~~~------- 293 (320)
T 1trb_A 222 LRDTQNSDNIESLDVAGLFVAIGHSPNTAIFE-GQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYR------- 293 (320)
T ss_dssp EECCTTCCCCEEEECSEEEECSCEEESCGGGT-TTSCEETTEECCCCSSSSCTTBCSSTTEEECGGGGCSSSC-------
T ss_pred EEeccCCCceEEEEcCEEEEEeCCCCChHHhc-ccccccCceEEECCCcccccccCCCCCEEEcccccCCcch-------
Confidence 654 4 5799999999999999998887 4566557889999987 7999999999999986421
Q ss_pred cchHHHHHHHHHHHHHHHhc
Q 012165 338 VEHVDHARQSAQHCIKALLS 357 (469)
Q Consensus 338 ~~~~~~A~~~a~~~a~~i~~ 357 (469)
.+..|..+|+.+|.+|..
T Consensus 294 --~~~~A~~~g~~aa~~i~~ 311 (320)
T 1trb_A 294 --QAITSAGTGCMAALDAER 311 (320)
T ss_dssp --CHHHHHHHHHHHHHHHHH
T ss_pred --hhhhhhccHHHHHHHHHH
Confidence 455688888888888753
No 72
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=7.8e-34 Score=276.66 Aligned_cols=278 Identities=19% Similarity=0.235 Sum_probs=195.5
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCC----CCCCCCCCCCcccccCCCCCCCCCCCCCcc-ccCCCCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE----AYAPYERPALTKGYLFPLDKKPARLPGFHT-CVGSGGE 123 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 123 (469)
++++||+|||||++|+++|..|++.|+ +|+|+|+. ...... +... .....++.+.. .......
T Consensus 6 ~~~~~vvIIG~G~aGl~~A~~l~~~g~---~v~lie~~~~~~~~~gg~-------~~~~--~~~~~~~~~~~~~~~~~~~ 73 (333)
T 1vdc_A 6 THNTRLCIVGSGPAAHTAAIYAARAEL---KPLLFEGWMANDIAPGGQ-------LTTT--TDVENFPGFPEGILGVELT 73 (333)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTC---CCEEECCSSBTTBCTTCG-------GGGC--SEECCSTTCTTCEEHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCC---eEEEEeccCccccCCCce-------eeec--cccccCCCCccCCCHHHHH
Confidence 345799999999999999999999987 79999982 211100 0000 00011121110 0000011
Q ss_pred CCCHhHHHHCCcEEEeCCcEEEEeCCCc--EEEeCCCeEEEeccEEeccCCCCCcCCCCCCCCc-------CcEEEecCH
Q 012165 124 RQTPEWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL-------PGVHYIRDV 194 (469)
Q Consensus 124 ~~~~~~~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~-------~~v~~~~~~ 194 (469)
....+++++.+++++.+. |..++.... +|++ ++.++.||+||+|||+++. .|.+++... .+++..
T Consensus 74 ~~l~~~~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~-~~~~~g~~~~~~~~~~~~~~~~--- 147 (333)
T 1vdc_A 74 DKFRKQSERFGTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAK-RLSFVGSGEVLGGFWNRGISAC--- 147 (333)
T ss_dssp HHHHHHHHHTTCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEEC-CCCCBTCSSSSSCCBTTTEESC---
T ss_pred HHHHHHHHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcC-CCCCCCccccccccccCcEEEe---
Confidence 123345667899999874 889987655 6766 7788999999999999876 455566432 223222
Q ss_pred HHHHHHHHhh--hcCCeEEEEcCChHHHHHHHHHHhCCCeEe------------ee-HHHHHHcCcEEEcCCeEEEEEeC
Q 012165 195 ADADALISSL--EKAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------RY-EQLYQQNGVKFVKGASIKNLEAG 259 (469)
Q Consensus 195 ~~~~~~~~~~--~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------~~-~~~l~~~gV~~~~~~~v~~i~~~ 259 (469)
..+.... ..+++++|||+|.+|+|+|..|.+++.+++ .+ ++.+++.||++++++.+.+++.+
T Consensus 148 ---~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~ 224 (333)
T 1vdc_A 148 ---AVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRASKIMQQRALSNPKIDVIWNSSVVEAYGD 224 (333)
T ss_dssp ---HHHHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCSCHHHHHHHHTCTTEEEECSEEEEEEEES
T ss_pred ---ccCccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCccHHHHHHHHhCCCeeEecCCceEEEeCC
Confidence 1122222 568999999999999999999999999987 12 24456789999999999999864
Q ss_pred CCC-cEEEEEcC---CC--CEEeCCEEEEccCCccCCchhhhcCCccc-CCCEEeCCC-CCCCCCceEEeccccccCCcc
Q 012165 260 SDG-RVAAVKLE---DG--STIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQ-FRTRMPGIFAIGDVAAFPLKM 331 (469)
Q Consensus 260 ~~~-~v~~v~~~---~g--~~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~Vd~~-~~t~~~~Vfa~GD~a~~~~~~ 331 (469)
+++ .+..+.+. +| +++++|.||+++|++|++++++ .++..+ +|+|.||++ ++|+.|+|||+|||+..+..
T Consensus 225 ~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~-~~l~~~~~G~i~vd~~~~~t~~~~vya~GD~~~~~~~- 302 (333)
T 1vdc_A 225 GERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLD-GGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYR- 302 (333)
T ss_dssp SSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGT-TSSCBCTTSCBCCCTTSCBCSSTTEEECGGGGCSSCC-
T ss_pred CCccceeeEEEEecCCCceEEEecCEEEEEeCCccchHHhh-ccccccCCCCEEechhhcccCCCCEEEeeeccCCCch-
Confidence 321 55456664 45 5799999999999999998876 467655 678999986 68999999999999986421
Q ss_pred CCcccccchHHHHHHHHHHHHHHHhc
Q 012165 332 YDRTARVEHVDHARQSAQHCIKALLS 357 (469)
Q Consensus 332 ~~~~~~~~~~~~A~~~a~~~a~~i~~ 357 (469)
.+..|..+|+.+|.+|..
T Consensus 303 --------~~~~A~~~g~~aa~~i~~ 320 (333)
T 1vdc_A 303 --------QAITAAGTGCMAALDAEH 320 (333)
T ss_dssp --------CHHHHHHHHHHHHHHHHH
T ss_pred --------hHHHHHHhHHHHHHHHHH
Confidence 455688888888887753
No 73
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=100.00 E-value=3e-33 Score=280.42 Aligned_cols=272 Identities=20% Similarity=0.200 Sum_probs=204.4
Q ss_pred CCcEEEEcCcHHHHHHHHHHHH---cCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCH
Q 012165 51 NREFVIVGGGNAAGYAARTFVE---HGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~---~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (469)
|++|+|||||+||+++|..|++ .|. +|+|||+++.+.|. |.++.. ... .....++ .....
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~g~---~V~vie~~~~~~~~-~~~~~~-~~~-~~~~~~~-----------~~~~~ 63 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGSKA---DVKVINKSRFSYFR-PALPHV-AIG-VRDVDEL-----------KVDLS 63 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGGGS---EEEEEESSSEEEEC-CSSCCC-CSS-CCCCCCE-----------EEEHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCC---eEEEEeCCCCceec-cchhhc-ccC-CcCHHHH-----------HHHHH
Confidence 3689999999999999999999 665 89999999876544 433321 111 1111111 22345
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCeE----EEeccEEeccCCCCCcCCCCCCCCcCcEEEecCHHHHHHHHHh
Q 012165 128 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKL----LKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISS 203 (469)
Q Consensus 128 ~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~----~~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~ 203 (469)
+++++.+++++.+ +|+.++++.+.|++.++.. +.||+||+|||++|. .|.++|... ....+.+..+...+.+.
T Consensus 64 ~~~~~~gv~~~~~-~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~-~~~ipG~~~-~~~~~~~~~~~~~~~~~ 140 (409)
T 3h8l_A 64 EALPEKGIQFQEG-TVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLA-TELVKGWDK-YGYSVCEPEFATKLREK 140 (409)
T ss_dssp HHTGGGTCEEEEC-EEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEEC-GGGSBTHHH-HCEESSSTTHHHHHHHH
T ss_pred HHHhhCCeEEEEe-eEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcC-ccCCCChhh-cCcCcCCHHHHHHHHHH
Confidence 6677889999987 9999999999999887753 999999999999876 455555322 34455666666666665
Q ss_pred hhcC-CeEEEEcCCh-------------------------HHHHHHH----HHHhCCC----eEe---------------
Q 012165 204 LEKA-KKVVVVGGGY-------------------------IGMEVAA----AAVGWKL----DTT--------------- 234 (469)
Q Consensus 204 ~~~~-~~vvVvG~G~-------------------------~g~e~A~----~l~~~g~----~v~--------------- 234 (469)
+... ++++|||+|. +++|+|. .+.+.|. +++
T Consensus 141 l~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~~l~~~~~~~ 220 (409)
T 3h8l_A 141 LESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGEYLSDLSPNS 220 (409)
T ss_dssp HHHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEEEECSSSSSTTBCHHH
T ss_pred HHHhcCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCccccccCHHH
Confidence 5442 6777999992 4677774 5556663 554
Q ss_pred --eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCchhhhc--CCcccCCCEEeCCC
Q 012165 235 --RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERV--GLNSSVGGIQVDGQ 310 (469)
Q Consensus 235 --~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~--gl~~~~g~i~Vd~~ 310 (469)
.+.+.+++.||++++++.|++++.+ .+.+++|+++++|.+|+++|++|+ ++++++ ++..++|+|.||++
T Consensus 221 ~~~~~~~l~~~gV~~~~~~~v~~i~~~------~v~~~~g~~~~~D~vi~a~G~~~~-~~l~~~~~~l~~~~G~i~vd~~ 293 (409)
T 3h8l_A 221 RKAVASIYNQLGIKLVHNFKIKEIREH------EIVDEKGNTIPADITILLPPYTGN-PALKNSTPDLVDDGGFIPTDLN 293 (409)
T ss_dssp HHHHHHHHHHHTCEEECSCCEEEECSS------EEEETTSCEEECSEEEEECCEECC-HHHHTSCGGGSCTTSCBCBBTT
T ss_pred HHHHHHHHHHCCCEEEcCCceEEECCC------eEEECCCCEEeeeEEEECCCCCcc-HHHHhccccCcCCCCCEEeCcc
Confidence 4567788999999999999999742 378899999999999999999998 677777 55445678999999
Q ss_pred CCC-CCCceEEeccccccCCccCCcccccchHHHHHHHHHHHHHHHhc
Q 012165 311 FRT-RMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLS 357 (469)
Q Consensus 311 ~~t-~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~ 357 (469)
+|| ++|||||+|||+..+.+. .+..|..||+.+|+||.+
T Consensus 294 ~~~~~~~~vfa~GD~~~~~~~~--------~~~~A~~q~~~aa~~i~~ 333 (409)
T 3h8l_A 294 MVSIKYDNVYAVGDANSMTVPK--------LGYLAVMTGRIAAQHLAN 333 (409)
T ss_dssp SBBSSCTTEEECGGGBTTCCSC--------CHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCEEEeehhccCCCCc--------HHHHHHHHHHHHHHHHHH
Confidence 999 899999999999864321 455689999999999975
No 74
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4e-33 Score=271.97 Aligned_cols=276 Identities=18% Similarity=0.292 Sum_probs=194.2
Q ss_pred CCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCcc-ccCCCCCCCC
Q 012165 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHT-CVGSGGERQT 126 (469)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 126 (469)
+++++||+|||||+||+++|..|++.|+ +|+|+|+..... . +... .....+|.+.. ..........
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~gg-~-------~~~~--~~~~~~~~~~~~~~~~~~~~~l 77 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAARAQL---APLVFEGTSFGG-A-------LMTT--TDVENYPGFRNGITGPELMDEM 77 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHHTTC---CCEEECCSSCSC-G-------GGSC--SCBCCSTTCTTCBCHHHHHHHH
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHhCCC---eEEEEecCCCCC-c-------eecc--chhhhcCCCCCCCCHHHHHHHH
Confidence 3456899999999999999999999987 799999652111 0 0000 00011121110 0000011123
Q ss_pred HhHHHHCCcEEEeCCcEEEEeCCC-cEE-EeCCCeEEEeccEEeccCCCCCcCCCCCCCC---cCcEEEecCHHHHHHHH
Q 012165 127 PEWYKEKGIEMIYQDPVTSIDIEK-QTL-ITNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADADALI 201 (469)
Q Consensus 127 ~~~~~~~~i~~~~~~~v~~id~~~-~~v-~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~---~~~v~~~~~~~~~~~~~ 201 (469)
.+++++.+++++.+. |..++..+ .+| .+++++++.||+||+|||+.|. .|.++|.. ..+++... ...
T Consensus 78 ~~~~~~~~v~~~~~~-v~~i~~~~~~~v~~~~~g~~~~~d~lviAtG~~~~-~~~i~g~~~~~~~~~~~~~------~~~ 149 (335)
T 2a87_A 78 REQALRFGADLRMED-VESVSLHGPLKSVVTADGQTHRARAVILAMGAAAR-YLQVPGEQELLGRGVSSCA------TCD 149 (335)
T ss_dssp HHHHHHTTCEEECCC-EEEEECSSSSEEEEETTSCEEEEEEEEECCCEEEC-CCCCTHHHHTBTTTEESCH------HHH
T ss_pred HHHHHHcCCEEEEee-EEEEEeCCcEEEEEeCCCCEEEeCEEEECCCCCcc-CCCCCchHhccCCceEEee------ccc
Confidence 345667899999874 99998732 467 7888888999999999999876 45444422 12333321 122
Q ss_pred HhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe------------eeH-HHHHHcCcEEEcCCeEEEEEeCCCCcEEEEE
Q 012165 202 SSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------RYE-QLYQQNGVKFVKGASIKNLEAGSDGRVAAVK 268 (469)
Q Consensus 202 ~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------~~~-~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~ 268 (469)
..+..+++++|||+|.+|+|+|..|.+++.+++ .+. +.+++.||++++++.+++++.+ +.+..+.
T Consensus 150 ~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~~~~~~~~~~~~~gV~v~~~~~v~~i~~~--~~~~~v~ 227 (335)
T 2a87_A 150 GFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRASKIMLDRARNNDKIRFLTNHTVVAVDGD--TTVTGLR 227 (335)
T ss_dssp GGGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSSCTTHHHHHHHCTTEEEECSEEEEEEECS--SSCCEEE
T ss_pred hhhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCccHHHHHHHhccCCcEEEeCceeEEEecC--CcEeEEE
Confidence 334578999999999999999999999999987 122 4557799999999999999853 2333444
Q ss_pred cC---CC--CEEeCCEEEEccCCccCCchhhhcCCccc-CCCEEeCCC-CCCCCCceEEeccccccCCccCCcccccchH
Q 012165 269 LE---DG--STIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQ-FRTRMPGIFAIGDVAAFPLKMYDRTARVEHV 341 (469)
Q Consensus 269 ~~---~g--~~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~Vd~~-~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~ 341 (469)
+. +| +++++|.||+++|++|++++++ .++..+ +|+|.||++ ++|+.|+|||+|||+..+.. .+
T Consensus 228 ~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~-~~l~~~~~G~i~vd~~~~~t~~~~iya~GD~~~~~~~---------~~ 297 (335)
T 2a87_A 228 VRDTNTGAETTLPVTGVFVAIGHEPRSGLVR-EAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYR---------QA 297 (335)
T ss_dssp EEEETTSCCEEECCSCEEECSCEEECCTTTB-TTBCBCTTSCBCCSTTSSBCSSTTEEECGGGTCCSCC---------CH
T ss_pred EEEcCCCceEEeecCEEEEccCCccChhHhh-cccccCCCccEEeCCCCCccCCCCEEEeeecCCccHH---------HH
Confidence 43 45 5799999999999999998886 466655 688999985 68999999999999986421 34
Q ss_pred HHHHHHHHHHHHHHh
Q 012165 342 DHARQSAQHCIKALL 356 (469)
Q Consensus 342 ~~A~~~a~~~a~~i~ 356 (469)
..|..+|+.+|.+|.
T Consensus 298 ~~A~~~g~~aA~~i~ 312 (335)
T 2a87_A 298 VTAAGSGCAAAIDAE 312 (335)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHH
Confidence 557788888888775
No 75
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=2.3e-32 Score=281.49 Aligned_cols=276 Identities=22% Similarity=0.316 Sum_probs=201.2
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC-CCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCH
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY-ERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (469)
...+||+|||||+||+++|.+|++.|+ +++|+|+.....+ ....+ ..++.+.............
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~---~v~lie~~~GG~~~~~~~~------------~~~~~~~~~~~~~l~~~l~ 274 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGI---RTGLMGERFGGQVLDTVDI------------ENYISVPKTEGQKLAGALK 274 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSTTGGGTTCSCB------------CCBTTBSSBCHHHHHHHHH
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCC---eEEEEECCCCCcccccccc------------cccCCCCCCCHHHHHHHHH
Confidence 346899999999999999999999987 7999986421100 00000 0011100000000011234
Q ss_pred hHHHHCCcEEEeCCcEEEEeCC-----CcEEEeCCCeEEEeccEEeccCCCCCcCCCCCCCC---cCcEEEecCHHHHHH
Q 012165 128 EWYKEKGIEMIYQDPVTSIDIE-----KQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADADA 199 (469)
Q Consensus 128 ~~~~~~~i~~~~~~~v~~id~~-----~~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~---~~~v~~~~~~~~~~~ 199 (469)
+.+++.+++++.+++|..++++ ..+|++++|.++.||+||+|||++|+ .|.++|.. ..++++....
T Consensus 275 ~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~-~~~ipG~~~~~~~~v~~~~~~----- 348 (521)
T 1hyu_A 275 AHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWR-NMNVPGEDQYRTKGVTYCPHC----- 348 (521)
T ss_dssp HHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEEC-CCCCTTTTTTTTTTEECCTTC-----
T ss_pred HHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcC-CCCCCChhhhcCceEEEeecC-----
Confidence 4566789999999899999864 45788889988999999999999876 45556642 2345443221
Q ss_pred HHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe------------eeHHHHHH-cCcEEEcCCeEEEEEeCCCCcEEE
Q 012165 200 LISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------RYEQLYQQ-NGVKFVKGASIKNLEAGSDGRVAA 266 (469)
Q Consensus 200 ~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------~~~~~l~~-~gV~~~~~~~v~~i~~~~~~~v~~ 266 (469)
......+++++|||+|.+|+|+|..|++.+.+|+ .+.+.+++ .||++++++.++++..+ ++++.+
T Consensus 349 -~~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~~~~l~~~l~~~~gV~v~~~~~v~~i~~~-~~~v~~ 426 (521)
T 1hyu_A 349 -DGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQDKVRSLKNVDIILNAQTTEVKGD-GSKVVG 426 (521)
T ss_dssp -CGGGGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCSCHHHHHHHTTCTTEEEECSEEEEEEEEC-SSSEEE
T ss_pred -chhhcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCcCHHHHHHHhcCCCcEEEeCCEEEEEEcC-CCcEEE
Confidence 1224578999999999999999999999999887 23455666 69999999999999853 456656
Q ss_pred EEcCC---CC--EEeCCEEEEccCCccCCchhhhcCCccc-CCCEEeCCCCCCCCCceEEeccccccCCccCCcccccch
Q 012165 267 VKLED---GS--TIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEH 340 (469)
Q Consensus 267 v~~~~---g~--~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~ 340 (469)
+.+.+ |+ ++++|.|++++|.+||++++++ .+..+ +|+|.||+++||++|+|||+|||+..+.. .
T Consensus 427 v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~l~~-~l~~~~~G~I~Vd~~~~ts~p~VfA~GD~~~~~~~---------~ 496 (521)
T 1hyu_A 427 LEYRDRVSGDIHSVALAGIFVQIGLLPNTHWLEG-ALERNRMGEIIIDAKCETSVKGVFAAGDCTTVPYK---------Q 496 (521)
T ss_dssp EEEEETTTCCEEEEECSEEEECCCEEESCGGGTT-TSCBCTTSCBCCCTTCBCSSTTEEECSTTBCCSSC---------C
T ss_pred EEEEeCCCCceEEEEcCEEEECcCCCCCchHHhh-hhccCCCCcEEeCCCCCCCCCCEEEeecccCCCcc---------e
Confidence 66653 53 6899999999999999998876 36654 67899999999999999999999986532 4
Q ss_pred HHHHHHHHHHHHHHHhc
Q 012165 341 VDHARQSAQHCIKALLS 357 (469)
Q Consensus 341 ~~~A~~~a~~~a~~i~~ 357 (469)
+..|+.+|..+|.+|..
T Consensus 497 ~~~A~~~g~~aa~~i~~ 513 (521)
T 1hyu_A 497 IIIATGEGAKASLSAFD 513 (521)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred eeehHHhHHHHHHHHHH
Confidence 45688888888888753
No 76
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=9.6e-33 Score=271.04 Aligned_cols=276 Identities=18% Similarity=0.278 Sum_probs=184.3
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC----CCCCcccccCCCCCCCCCCCCCccccC-------
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE----RPALTKGYLFPLDKKPARLPGFHTCVG------- 119 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~------- 119 (469)
++||+|||||++|+++|..|+++|+ +|+|+|+++.+... .+.+ .+.. ......++++.....
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~---~v~vie~~~~~gg~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~ 75 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGL---SYVILDAEASPGGAWQHAWHSL---HLFS-PAGWSSIPGWPMPASQGPYPAR 75 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSC---CEEEECCSSSSSGGGGGSCTTC---BCSS-CGGGSCCSSSCCCCCSSSSCBH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC---CEEEEECCCCCCCcccCCCCCc---EecC-chhhhhCCCCCCCCCccCCCCH
Confidence 5799999999999999999999987 79999998754210 0000 0000 000011111100000
Q ss_pred CCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcE---EEeCCCeEEEeccEEeccCC--CCCcCCCCCCCC-cCcE-EEec
Q 012165 120 SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQT---LITNSGKLLKYGSLIVATGC--TASRFPEKIGGY-LPGV-HYIR 192 (469)
Q Consensus 120 ~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~---v~~~~g~~~~yd~lVlAtG~--~~~~~~~~~g~~-~~~v-~~~~ 192 (469)
........+++++.+++++.+++|++++.++.. |+++++ ++.||+||+|||. .|. +|.++|.. ..+. .+..
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~~~-~~~~~g~~~~~~~~~~~~ 153 (357)
T 4a9w_A 76 AEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGEAY-TPEYQGLESFAGIQLHSA 153 (357)
T ss_dssp HHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGGBC-CCCCTTGGGCCSEEEEGG
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCCCC-CCCCCCccccCCcEEEec
Confidence 000112234456779999999999999987765 667777 7999999999995 443 45555532 1221 1111
Q ss_pred CHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe---------------------eeHHHHH----------
Q 012165 193 DVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT---------------------RYEQLYQ---------- 241 (469)
Q Consensus 193 ~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~---------------------~~~~~l~---------- 241 (469)
...+ .....+++++|||+|.+|+|+|..|++.+ +++ .+.+.+.
T Consensus 154 ~~~~-----~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (357)
T 4a9w_A 154 HYST-----PAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGRVLFERATERWKAQQEGREPDL 227 (357)
T ss_dssp GCCC-----SGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTHHHHTC----------------
T ss_pred cCCC-----hhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCccHHHHHHHHHhccccccCCCc
Confidence 1111 11236799999999999999999999987 565 0111111
Q ss_pred ------------------HcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCchhhhcCCcccCC
Q 012165 242 ------------------QNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVG 303 (469)
Q Consensus 242 ------------------~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g 303 (469)
+.|+ +..+..+.+++.. .+.+++|+++++|.||+++|++|++++++++++..++|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~g~-i~~~~~v~~~~~~------~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~G 300 (357)
T 4a9w_A 228 PPGGFGDIVMVPPVLDARARGV-LAAVPPPARFSPT------GMQWADGTERAFDAVIWCTGFRPALSHLKGLDLVTPQG 300 (357)
T ss_dssp ------CBCCCHHHHHHHHTTC-CCEECCCSEEETT------EEECTTSCEEECSEEEECCCBCCCCGGGTTTTCBCTTS
T ss_pred ccccccCcccChhHHHHHhcCc-eEEecCcceEeCC------eeEECCCCEecCCEEEECCCcCCCCcccCcccccCCCC
Confidence 3343 4444556666532 57899999999999999999999999999999996678
Q ss_pred CEEeCCC--CCCCCCceEEec--cccccCCccCCcccccchHHHHHHHHHHHHHHHhc
Q 012165 304 GIQVDGQ--FRTRMPGIFAIG--DVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLS 357 (469)
Q Consensus 304 ~i~Vd~~--~~t~~~~Vfa~G--D~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~ 357 (469)
+|.||++ ++|++|+|||+| ||+..... .+..|..+|+.+|++|..
T Consensus 301 ~i~vd~~~l~~t~~~~vya~Gd~d~~~~~~~---------~~~~A~~~g~~~a~~i~~ 349 (357)
T 4a9w_A 301 QVEVDGSGLRALAVPSVWLLGYGDWNGMASA---------TLIGVTRYAREAVRQVTA 349 (357)
T ss_dssp CBCBCTTSCBBSSCTTEEECSSCGGGSTTCS---------STTTHHHHHHHHHHHHHH
T ss_pred CccccCCcccCCCCCCeEEeccccccccchh---------hhhhhHHHHHHHHHHHHH
Confidence 8999999 899999999999 56652211 222377888888888864
No 77
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.98 E-value=2.6e-32 Score=275.25 Aligned_cols=279 Identities=20% Similarity=0.218 Sum_probs=197.0
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (469)
++||||||||+||+++|..|++.+. ..+|+|||+++.+.|. |.+.. +... .....++ .....+++
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~-g~~Vtlie~~~~~~~~-~~~~~-~~~g-~~~~~~~-----------~~~~~~~~ 66 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMP-DLKITLISDRPYFGFT-PAFPH-LAMG-WRKFEDI-----------SVPLAPLL 66 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCT-TCEEEEECSSSEEECG-GGHHH-HHHT-CSCGGGS-----------EEESTTTG
T ss_pred CCCEEEECccHHHHHHHHHHHcCCC-CCeEEEECCCCCCCcC-CCcch-hccC-ccCHHHH-----------HHHHHHHH
Confidence 4799999999999999999999432 4489999999887664 33221 1111 0011111 12344556
Q ss_pred HHCCcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCCcCCCCCCCCcCc-EEEecCHHHHHHHHHhh---hc
Q 012165 131 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPG-VHYIRDVADADALISSL---EK 206 (469)
Q Consensus 131 ~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~~~-v~~~~~~~~~~~~~~~~---~~ 206 (469)
++.+++++.+ +|+.++++.++|.+++++++.||+||+|||+++. .|.. ...+ ...+.+..+...+.+.+ ..
T Consensus 67 ~~~gv~~~~~-~v~~id~~~~~v~~~~g~~i~~d~liiAtG~~~~-~pg~---~~~g~~~~~~~~~~a~~~~~~~~~~~~ 141 (430)
T 3h28_A 67 PKFNIEFINE-KAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV-FGAE---GQEENSTSICTAEHALETQKKLQELYA 141 (430)
T ss_dssp GGGTEEEECS-CEEEEETTTTEEEETTCCEEECSEEEECCCCEEE-CCSB---THHHHSCCCSSHHHHHHHHHHHHHHHH
T ss_pred HhcCCEEEEE-EEEEEECCCCEEEECCCcEEECCEEEEcCCcccc-cCCC---CCcCCccCcCCHHHHHHHHHHHHHHHh
Confidence 7789999975 9999999999999999989999999999999875 3421 1111 22344555555544322 23
Q ss_pred CCeEEEEcCChHH------HHHHH----HHHhCCC----eEe---------------------eeHHHHHHcCcEEEcCC
Q 012165 207 AKKVVVVGGGYIG------MEVAA----AAVGWKL----DTT---------------------RYEQLYQQNGVKFVKGA 251 (469)
Q Consensus 207 ~~~vvVvG~G~~g------~e~A~----~l~~~g~----~v~---------------------~~~~~l~~~gV~~~~~~ 251 (469)
+++++|||+|..+ +|+|. .+.++|. +++ .+.+.+++.||++++++
T Consensus 142 ~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~~~~~~~l~~~l~~~GV~i~~~~ 221 (430)
T 3h28_A 142 NPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANV 221 (430)
T ss_dssp SCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSC
T ss_pred cCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCccccccccCcchHHHHHHHHHHHHCCCEEEeCC
Confidence 5567788887543 88774 4556663 343 34577889999999999
Q ss_pred eEEEEEeCCCCcEEEEEcCC----CCEEeCCEEEEccCCccCCchhhh--cCCcccCC-CEEeCCCCCC-CCCceEEecc
Q 012165 252 SIKNLEAGSDGRVAAVKLED----GSTIDADTIVIGIGAKPTVSPFER--VGLNSSVG-GIQVDGQFRT-RMPGIFAIGD 323 (469)
Q Consensus 252 ~v~~i~~~~~~~v~~v~~~~----g~~i~~D~vi~a~G~~p~~~~~~~--~gl~~~~g-~i~Vd~~~~t-~~~~Vfa~GD 323 (469)
.|++++.+ .+.+++ ++++++|.+++++|++|+ .++.+ .++..++| +|.||+++|| ++|||||+||
T Consensus 222 ~v~~v~~~------~v~~~~~~~~g~~i~~D~vv~a~G~~~~-~~l~~~~~gl~~~~G~~i~Vd~~l~t~~~~~Ifa~GD 294 (430)
T 3h28_A 222 AVKAIEPD------KVIYEDLNGNTHEVPAKFTMFMPSFQGP-EVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGV 294 (430)
T ss_dssp EEEEECSS------EEEEECTTSCEEEEECSEEEEECEEECC-HHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECST
T ss_pred EEEEEeCC------eEEEEecCCCceEEeeeEEEECCCCccc-hhHhhccccCcCCCCCEEecCccccCCCCCCEEEEEe
Confidence 99999732 244444 678999999999999987 45555 57755577 8999999999 9999999999
Q ss_pred ccccCCccCCcc---cccchHHHHHHHHHHHHHHHhc
Q 012165 324 VAAFPLKMYDRT---ARVEHVDHARQSAQHCIKALLS 357 (469)
Q Consensus 324 ~a~~~~~~~~~~---~~~~~~~~A~~~a~~~a~~i~~ 357 (469)
|+..+... +.. ........|..||+.+|+||..
T Consensus 295 ~~~~~~~~-~~~~~~~~pk~~~~A~~~g~~aa~ni~~ 330 (430)
T 3h28_A 295 VTAIPPIE-KTPIPTGVPKTGMMIEQMAMAVAHNIVN 330 (430)
T ss_dssp TBCCCCSS-CCSSCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred eeccCCcc-CCCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 99876421 111 0123556799999999999964
No 78
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.97 E-value=3e-31 Score=262.01 Aligned_cols=286 Identities=17% Similarity=0.191 Sum_probs=191.5
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCC-------CC----CCCCcccccCCCCCCCCCCCCC-ccc-
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP-------YE----RPALTKGYLFPLDKKPARLPGF-HTC- 117 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~-------~~----~~~l~~~~~~~~~~~~~~~~~~-~~~- 117 (469)
++||+|||||+||+++|..|++.|+ . +|+|||+++ .+ .. .+.+.... ++........+.. ...
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~-~-~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~ 79 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGI-T-DVIILEKGT-VGHSFKHWPKSTRTITPSFTSNG-FGMPDMNAISMDTSPAFT 79 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-C-CEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGG-GTCCCTTCSSTTCCHHHH
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCC-C-cEEEEecCC-CCCccccCcccccccCcchhccc-CCchhhhhcccccccccc
Confidence 5799999999999999999999886 2 799999986 21 10 01000000 0000000000000 000
Q ss_pred cCCC------CCCCCHhHHHHCCcEEEeCCcEEEEeCCC--cEEEeCCCeEEEeccEEeccCCCCCcCCCCCCCCcCcEE
Q 012165 118 VGSG------GERQTPEWYKEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVH 189 (469)
Q Consensus 118 ~~~~------~~~~~~~~~~~~~i~~~~~~~v~~id~~~--~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~~~v~ 189 (469)
.... .......++++.+++++.+++|+.+++++ ..|.+.++ ++.||+||+|||+.+. |.+|+ ..+.
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~--p~ip~---~~~~ 153 (369)
T 3d1c_A 80 FNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNF--PKKPF---KYGI 153 (369)
T ss_dssp HCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTS--BCCCS---SSCE
T ss_pred ccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCc--cCCCC---Ccee
Confidence 0000 00011234467899999998999998763 46777776 5899999999999764 33343 1222
Q ss_pred EecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe-------e------------------eHHHHHHcC
Q 012165 190 YIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT-------R------------------YEQLYQQNG 244 (469)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~-------~------------------~~~~l~~~g 244 (469)
+...+.+.. ..++++|+|||+|.+|+|+|..|.+.+.+|+ . +.+.+++.|
T Consensus 154 ~~~~~~~~~-----~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g 228 (369)
T 3d1c_A 154 HYSEIEDFD-----NFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGA 228 (369)
T ss_dssp EGGGCSCGG-----GSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CTTSCCHHHHHHHHHHHHTTC
T ss_pred chhhcCChh-----hcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCC
Confidence 222111111 1256899999999999999999999999887 1 123345565
Q ss_pred -cEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEe-CCEEEEccCCccCCchhhhcCCcccCCCEEeCCC-CCCCCCceEEe
Q 012165 245 -VKFVKGASIKNLEAGSDGRVAAVKLEDGSTID-ADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQ-FRTRMPGIFAI 321 (469)
Q Consensus 245 -V~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~-~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~Vd~~-~~t~~~~Vfa~ 321 (469)
|++++++.|.+++.. ++. ..+.+.+|+++. +|.||+++|++|+++++.+.+++.++|++.||++ ++|++|+|||+
T Consensus 229 ~v~~~~~~~v~~i~~~-~~~-~~v~~~~g~~~~~~d~vi~a~G~~~~~~~~~~~~~~~~~g~i~v~~~~~~t~~~~v~a~ 306 (369)
T 3d1c_A 229 RIEMNVHYTVKDIDFN-NGQ-YHISFDSGQSVHTPHEPILATGFDATKNPIVQQLFVTTNQDIKLTTHDESTRYPNIFMI 306 (369)
T ss_dssp CEEEECSCCEEEEEEE-TTE-EEEEESSSCCEEESSCCEECCCBCGGGSHHHHHHSCCTTSCCCBCTTSBBSSSTTEEEC
T ss_pred cEEEecCcEEEEEEec-CCc-eEEEecCCeEeccCCceEEeeccCCccchhhhhhccCCCCCEEechhhcccCCCCeEEe
Confidence 999999999999743 232 357788997765 6999999999999877766556544677999975 67899999999
Q ss_pred ccccccCCccCCcccccchHHHHHHHHHHHHHHHhcCC
Q 012165 322 GDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQ 359 (469)
Q Consensus 322 GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~ 359 (469)
|||+..+.... ..+..+..||+.+|++|.+..
T Consensus 307 GD~~~~~~~~~------~~~~~~~~~a~~~a~~l~~~~ 338 (369)
T 3d1c_A 307 GATVENDNAKL------CYIYKFRARFAVLAHLLTQRE 338 (369)
T ss_dssp STTCCCSSCCC------CSHHHHGGGHHHHHHHHHHHT
T ss_pred ccccccCCeeE------EEEehhhHHHHHHHHHHhccc
Confidence 99998765432 134457788999999998643
No 79
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.97 E-value=9.5e-32 Score=275.23 Aligned_cols=253 Identities=16% Similarity=0.169 Sum_probs=191.3
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (469)
++||+|||||+||+++|.+|++. + +|+|+|+++..++.....+.... . ++. . ......++
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~---~V~vie~~~~~GG~~~~~~~~~~-g-------~~~-~-------~~~~~~~l 167 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-L---TVALIEERGWLGGDMWLKGIKQE-G-------FNK-D-------SRKVVEEL 167 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-C---CEEEECTTSSSSCSGGGTCSEET-T-------TTE-E-------HHHHHHHH
T ss_pred cCCEEEECccHHHHHHHHHHHhc-C---CEEEEeCCCCCCCeeeccccccC-C-------CCC-C-------HHHHHHHH
Confidence 46999999999999999999998 5 89999999887665332221110 0 000 0 00111121
Q ss_pred H---HCCcEEEeCCcEEEEeCCCcEEEe---CCCe--EEEeccEEeccCCCCCcCCCCCCCCcCcEEEecCHHHHHHHHH
Q 012165 131 K---EKGIEMIYQDPVTSIDIEKQTLIT---NSGK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALIS 202 (469)
Q Consensus 131 ~---~~~i~~~~~~~v~~id~~~~~v~~---~~g~--~~~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~ 202 (469)
. +.+++++.+++|.+++.+++.+.+ ++++ .+.||+||||||+.|+ .|.++|.+.+++++.. +...+.+
T Consensus 168 ~~~l~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~-~~~~~g~~~~gv~~~~---~~~~~~~ 243 (493)
T 1y56_A 168 VGKLNENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDS-TMLFENNDMPGVFRRD---FALEVMN 243 (493)
T ss_dssp HHTCCTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEEC-CCCCTTTTSTTEEEHH---HHHHHHH
T ss_pred HHHHhcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCcc-CCCCCCCCCCCEEEcH---HHHHHHH
Confidence 1 458999888888888877653322 4454 6899999999999987 4567888888887653 3344433
Q ss_pred h--hhcCCeEEEEcCChHHHHHHHHHHhCCCeEeeeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEE
Q 012165 203 S--LEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTI 280 (469)
Q Consensus 203 ~--~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~v 280 (469)
. ..++++++|+|+|++|+| +.+++.||++++++.+.+++.+ +.+..+.+++|+++++|.|
T Consensus 244 ~~~~~~~~~vvViGgG~~gle----------------~~l~~~GV~v~~~~~v~~i~~~--~~v~~v~~~~g~~i~aD~V 305 (493)
T 1y56_A 244 VWEVAPGRKVAVTGSKADEVI----------------QELERWGIDYVHIPNVKRVEGN--EKVERVIDMNNHEYKVDAL 305 (493)
T ss_dssp TSCBCSCSEEEEESTTHHHHH----------------HHHHHHTCEEEECSSEEEEECS--SSCCEEEETTCCEEECSEE
T ss_pred hcccCCCCEEEEECCCHHHHH----------------HHHHhCCcEEEeCCeeEEEecC--CceEEEEeCCCeEEEeCEE
Confidence 2 235689999999999998 4677889999999999999843 3455677889999999999
Q ss_pred EEccCCccCCchhhhcCCcc--c-CCCEE-eCCCCCCCCCceEEeccccccCCccCCcccccchHHHHHHHHHHHHHHHh
Q 012165 281 VIGIGAKPTVSPFERVGLNS--S-VGGIQ-VDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALL 356 (469)
Q Consensus 281 i~a~G~~p~~~~~~~~gl~~--~-~g~i~-Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~ 356 (469)
|+++|++|++++++.+|++. + +|++. ||++++ +.|+|||+|||+..+ .+..|..+|+.+|.+|.
T Consensus 306 v~a~G~~p~~~l~~~~g~~~~~~~~g~i~~vd~~~~-s~~~vya~GD~~~~~-----------~~~~A~~~g~~aa~~i~ 373 (493)
T 1y56_A 306 IFADGRRPDINPITQAGGKLRFRRGYYSPVLDEYHR-IKDGIYVAGSAVSIK-----------PHYANYLEGKLVGAYIL 373 (493)
T ss_dssp EECCCEEECCHHHHHTTCCEEEETTEEEECCCTTSE-EETTEEECSTTTCCC-----------CHHHHHHHHHHHHHHHH
T ss_pred EECCCcCcCchHHHhcCCCccccCCceeeccccccC-cCCCEEEEeccCCcc-----------CHHHHHHHHHHHHHHHH
Confidence 99999999999999988864 2 56676 899999 999999999999742 45568999999999997
Q ss_pred c
Q 012165 357 S 357 (469)
Q Consensus 357 ~ 357 (469)
+
T Consensus 374 ~ 374 (493)
T 1y56_A 374 K 374 (493)
T ss_dssp H
T ss_pred H
Confidence 5
No 80
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.97 E-value=5.2e-32 Score=289.16 Aligned_cols=304 Identities=15% Similarity=0.157 Sum_probs=200.0
Q ss_pred cCCccccccccc-c--cccccCCCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCC
Q 012165 29 HSSAKNFQRRGF-V--VAYSSFANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLD 105 (469)
Q Consensus 29 ~~~~~~~~~~~~-~--~~~~~~~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~ 105 (469)
|.+|+....+.. . ....+....++||+|||||+||++||..|++.|+ +|+|+|+++..... +.. .
T Consensus 364 C~~n~~~g~e~~~~~~~~~~~~~~~~~~VvIIGgGpAGl~aA~~L~~~G~---~Vtlie~~~~~GG~---~~~--~---- 431 (729)
T 1o94_A 364 CTQNATAGEEYRRGWHPEKFRQTKNKDSVLIVGAGPSGSEAARVLMESGY---TVHLTDTAEKIGGH---LNQ--V---- 431 (729)
T ss_dssp CSSCTTTTTHHHHCCCTTCCCCCSSCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSTTTT---HHH--H----
T ss_pred eccCccccccccccccccccccccCCceEEEECCCHHHHHHHHHHHHCCC---eEEEEeCCCCcCCe---eee--c----
Confidence 888886543321 1 1112234557899999999999999999999987 79999998765322 000 0
Q ss_pred CCCCCCCCCccccCCCCCCCCHhHHHHCCcEEE--eCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCC-------c
Q 012165 106 KKPARLPGFHTCVGSGGERQTPEWYKEKGIEMI--YQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS-------R 176 (469)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~-------~ 176 (469)
..+|++.. .....+++.. .++.+ .+..+..++. ++.++++++..+.||+||||||+.++ .
T Consensus 432 ---~~~pg~~~------~~~~~~~~~~-~i~~~~~~~~~~v~i~~-~~~v~~~~~~~~~~d~vviAtG~~~~~~~~~~p~ 500 (729)
T 1o94_A 432 ---AALPGLGE------WSYHRDYRET-QITKLLKKNKESQLALG-QKPMTADDVLQYGADKVIIATGARWNTDGTNCLT 500 (729)
T ss_dssp ---TTSTTCGG------GHHHHHHHHH-HHHHHHHHSTTCEEECS-CCCCCHHHHHTSCCSEEEECCCEEECSSCCCTTT
T ss_pred ---ccCCChHH------HHHHHHHHHH-HHHHhhcccCCceEEEe-CeEEehhhccccCCCEEEEcCCCCcccccccCcc
Confidence 01111100 0011112111 11100 0112222322 23444555556899999999999842 2
Q ss_pred CCCCCCCC--cCcEEEecCHHHHHHHHHhhhcCCeEEEEc--CChHHHHHHHHHHhCCCeEe------------------
Q 012165 177 FPEKIGGY--LPGVHYIRDVADADALISSLEKAKKVVVVG--GGYIGMEVAAAAVGWKLDTT------------------ 234 (469)
Q Consensus 177 ~~~~~g~~--~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG--~G~~g~e~A~~l~~~g~~v~------------------ 234 (469)
.|.++|.+ .+++++. .+. +......+++|+||| +|.+|+|+|..|+++|.+|+
T Consensus 501 ~~~ipG~~~~~~~v~~~---~~~--l~~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~l~~~~~~~~~~~ 575 (729)
T 1o94_A 501 HDPIPGADASLPDQLTP---EQV--MDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLANYMHFTLEYP 575 (729)
T ss_dssp SSCCTTCCTTSTTEECH---HHH--HHCCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTTHHHHHTTCHH
T ss_pred CCCCCCccccCCCEEEH---HHH--hcCCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEecccccccccccccHH
Confidence 45566655 4566543 222 222334678999999 99999999999999999887
Q ss_pred eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCC-CE------------------EeCCEEEEccCCccCCchhhh
Q 012165 235 RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG-ST------------------IDADTIVIGIGAKPTVSPFER 295 (469)
Q Consensus 235 ~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g-~~------------------i~~D~vi~a~G~~p~~~~~~~ 295 (469)
.+.+.+++.||++++++.+++++. ++......+.++ ++ +++|.||+++|.+|+++++++
T Consensus 576 ~~~~~l~~~GV~i~~~~~v~~i~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l~~~ 653 (729)
T 1o94_A 576 NMMRRLHELHVEELGDHFCSRIEP--GRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECTLWNE 653 (729)
T ss_dssp HHHHHHHHTTCEEECSEEEEEEET--TEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECCHHHHH
T ss_pred HHHHHHHhCCCEEEcCcEEEEEEC--CeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCChHHHHH
Confidence 123556789999999999999973 222111122333 33 999999999999999988775
Q ss_pred cCCcccCCCEEeCCCCCCCCCceEEeccccccCCccCCcccccchHHHHHHHHHHHHHHHhcCCCCCCCCCCceeeeccc
Q 012165 296 VGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYDYLPYFYSRVFE 375 (469)
Q Consensus 296 ~gl~~~~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~~~~~~~p~~~~~~~~ 375 (469)
++. .+|++++|++|+|||+|||+... .+..|..+|+.+|.+|.+. ..+..+|| |+++|+
T Consensus 654 l~~-------~vd~~~~t~~~~VyAiGD~~~~~-----------~~~~A~~~G~~aA~~i~~~--l~~~~~p~-~~~~~~ 712 (729)
T 1o94_A 654 LKA-------RESEWAENDIKGIYLIGDAEAPR-----------LIADATFTGHRVAREIEEA--NPQIAIPY-KRETIA 712 (729)
T ss_dssp HHH-------TGGGTGGGTCCEEEECGGGTSCC-----------CHHHHHHHHHHHHHTTTSS--CTTSCCCC-CCCCCC
T ss_pred Hhh-------hcccccccCCCCeEEEeCccchh-----------hHHHHHHHHHHHHHHhhhh--cccCCCCe-eeeccc
Confidence 421 26788999999999999998621 4567999999999999753 45677888 888887
Q ss_pred ccCCCcceeeEEeec
Q 012165 376 YEGSPRKVWWQFFGD 390 (469)
Q Consensus 376 ~~g~~~~~~~~~~G~ 390 (469)
+. +|++|.
T Consensus 713 ~~-------~~~~~~ 720 (729)
T 1o94_A 713 WG-------TPHMPG 720 (729)
T ss_dssp TT-------CCSSTT
T ss_pred Cc-------ccccCC
Confidence 64 566654
No 81
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.97 E-value=5.8e-31 Score=266.48 Aligned_cols=272 Identities=16% Similarity=0.173 Sum_probs=187.1
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
.+++|+|||||+||+++|..|++.+. +.+|+|||+++.+ |.. +... ..+.......+ .....++
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~-~~~V~vie~~~~~-gg~--~~~g-~~p~~~~~~~~-----------~~~~~~~ 68 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHS-RAHVDIYEKQLVP-FGL--VRFG-VAPDHPEVKNV-----------INTFTQT 68 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCS-SCEEEEECSSSSS-CTH--HHHT-SCTTCGGGGGH-----------HHHHHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCC-CCCEEEEeCCCcC-Cce--eecc-cCCCCccHHHH-----------HHHHHHH
Confidence 35799999999999999999999983 4589999998765 321 1000 00100000000 1123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCCcCCCCCCCCcCcEEEecCHHHHHH----HHHh--
Q 012165 130 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADA----LISS-- 203 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~----~~~~-- 203 (469)
+++.+++++.++.+ .+.|++++. .+.||+||||||+.+...|.++|.+.+++++.+++..... ....
T Consensus 69 ~~~~gv~~~~~~~v------~~~V~~~~~-~~~~d~lVlAtGs~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~ 141 (460)
T 1cjc_A 69 ARSDRCAFYGNVEV------GRDVTVQEL-QDAYHAVVLSYGAEDHQALDIPGEELPGVFSARAFVGWYNGLPENRELAP 141 (460)
T ss_dssp HTSTTEEEEBSCCB------TTTBCHHHH-HHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCC
T ss_pred HHhCCcEEEeeeEE------eeEEEeccc-eEEcCEEEEecCcCCCCCCCCCCCCCCcEEEHHHHHHHhhcCcccccccc
Confidence 67789999988655 233444443 3689999999999964456788877888887654321100 0000
Q ss_pred hhcCCeEEEEcCChHHHHHHHHHH--------------------hCCC-eEeee--------------------------
Q 012165 204 LEKAKKVVVVGGGYIGMEVAAAAV--------------------GWKL-DTTRY-------------------------- 236 (469)
Q Consensus 204 ~~~~~~vvVvG~G~~g~e~A~~l~--------------------~~g~-~v~~~-------------------------- 236 (469)
...+++++|||+|++|+|+|..|+ +.+. +|+.+
T Consensus 142 ~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~ 221 (460)
T 1cjc_A 142 DLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTRP 221 (460)
T ss_dssp CTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCTTEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcCCCcee
Confidence 114789999999999999999998 5666 56511
Q ss_pred ------------------------HH----HHHH--------------cCcEEEcCCeEEEEEeCCCC-cEEEEEcC---
Q 012165 237 ------------------------EQ----LYQQ--------------NGVKFVKGASIKNLEAGSDG-RVAAVKLE--- 270 (469)
Q Consensus 237 ------------------------~~----~l~~--------------~gV~~~~~~~v~~i~~~~~~-~v~~v~~~--- 270 (469)
.+ .+++ .||+++++..+.+|..++++ ++.+|++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~ 301 (460)
T 1cjc_A 222 MLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTR 301 (460)
T ss_dssp ECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEE
T ss_pred EechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEEEEEEEEE
Confidence 01 1223 78999999999999864335 56555553
Q ss_pred ------------CC--CEEeCCEEEEccCCccCCchhhhcCC-ccc-CCCEEeCCCCCCC-CCceEEeccccccCCccCC
Q 012165 271 ------------DG--STIDADTIVIGIGAKPTVSPFERVGL-NSS-VGGIQVDGQFRTR-MPGIFAIGDVAAFPLKMYD 333 (469)
Q Consensus 271 ------------~g--~~i~~D~vi~a~G~~p~~~~~~~~gl-~~~-~g~i~Vd~~~~t~-~~~Vfa~GD~a~~~~~~~~ 333 (469)
+| +++++|+||+++|++|++ + .|+ +.+ +++|.||+++||+ +|+|||+|||+..+..
T Consensus 302 l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~-l---~gl~~~d~~g~i~vn~~~rt~~~p~vya~Gd~~~g~~~--- 374 (460)
T 1cjc_A 302 LEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRP-I---DPSVPFDPKLGVVPNMEGRVVDVPGLYCSGWVKRGPTG--- 374 (460)
T ss_dssp EESSGGGCEEEEEEEEEEEECSEEEECCCEECCC-C---CTTSCCBTTTTBCCEETTEETTCTTEEECTHHHHCTTC---
T ss_pred EccccCCCcccCCCceEEEEcCEEEECCCCCCCC-C---CCCcccccCCCeeECCCCcCcCCCCEEEEEeCCcCCCc---
Confidence 34 579999999999999996 3 566 555 5889999999998 7999999999975432
Q ss_pred cccccchHHHHHHHHHHHHHHHhc
Q 012165 334 RTARVEHVDHARQSAQHCIKALLS 357 (469)
Q Consensus 334 ~~~~~~~~~~A~~~a~~~a~~i~~ 357 (469)
.+..|+.+|..+|.+|++
T Consensus 375 ------~i~~a~~~g~~aa~~i~~ 392 (460)
T 1cjc_A 375 ------VITTTMTDSFLTGQILLQ 392 (460)
T ss_dssp ------CHHHHHHHHHHHHHHHHH
T ss_pred ------cHHHHHHHHHHHHHHHHH
Confidence 244577777777777764
No 82
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.97 E-value=6.1e-30 Score=280.34 Aligned_cols=271 Identities=15% Similarity=0.165 Sum_probs=197.8
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (469)
.+||||||||+||++||.+|++.|+ +|+|||+++.++..-...++.+ +++... .++.....+.+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~---~V~lie~~~~~GG~~~~~~k~~----------i~~~~~---~~~~~~~~~~l 191 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGA---RVMLLDERAEAGGTLLDTAGEQ----------IDGMDS---SAWIEQVTSEL 191 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSSGGGGGSSCCE----------ETTEEH---HHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC---cEEEEeCCCCCCceeccCCccc----------cCCCCH---HHHHHHHHHHH
Confidence 5789999999999999999999987 7999999876532100000100 110000 00001112334
Q ss_pred HH-CCcEEEeCCcEEEEeCCCcEEEe-----------------CCCeEEEeccEEeccCCCCCcCCCCCCCCcCcEEEec
Q 012165 131 KE-KGIEMIYQDPVTSIDIEKQTLIT-----------------NSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIR 192 (469)
Q Consensus 131 ~~-~~i~~~~~~~v~~id~~~~~v~~-----------------~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~ 192 (469)
.+ .+++++.+++|..++..+....+ .++.++.||+||||||+.|+ +|+++|.+.+++++..
T Consensus 192 ~~~~~v~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~-~~~ipG~~~~gv~~~~ 270 (965)
T 2gag_A 192 AEAEETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHER-PIVFENNDRPGIMLAG 270 (965)
T ss_dssp HHSTTEEEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEEC-CCCCBTCCSTTEEEHH
T ss_pred hhcCCcEEEeCCEEEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccC-CCCCCCCCCCCEEEhH
Confidence 44 48999998899998875532211 11236899999999999986 4567888888988764
Q ss_pred CHHHHHHHHHh--hhcCCeEEEEcCChHHHHHHHHHHhCCCeEeee---------HHHHHHcCcEEEcCCeEEEEEeCCC
Q 012165 193 DVADADALISS--LEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTRY---------EQLYQQNGVKFVKGASIKNLEAGSD 261 (469)
Q Consensus 193 ~~~~~~~~~~~--~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~~~---------~~~l~~~gV~~~~~~~v~~i~~~~~ 261 (469)
+. +.+... ..++++++|||+|++|+|+|..|.++|.+++.+ .+.+++.||++++++.+++++.+++
T Consensus 271 ~~---~~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~ 347 (965)
T 2gag_A 271 AV---RSYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARSSISAAAAQAVADGVQVISGSVVVDTEADEN 347 (965)
T ss_dssp HH---HHHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCHHHHHHHHTTCCEEETEEEEEEEECTT
T ss_pred HH---HHHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccchhHHHHHhCCeEEEeCCEeEEEeccCC
Confidence 33 222221 235689999999999999999999999988711 4678899999999999999985324
Q ss_pred CcEEEEEcCC-------C--CEEeCCEEEEccCCccCCchhhhcCCcccCCCEEeCCCCC-----CCCCceEEecccccc
Q 012165 262 GRVAAVKLED-------G--STIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFR-----TRMPGIFAIGDVAAF 327 (469)
Q Consensus 262 ~~v~~v~~~~-------g--~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~Vd~~~~-----t~~~~Vfa~GD~a~~ 327 (469)
+++..|++.+ | +++++|.|++++|++||+++++.. .++|.+|++++ |+.|+|||+|||+..
T Consensus 348 ~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~~-----~g~i~vd~~~~~~v~~ts~p~IyAaGD~a~~ 422 (965)
T 2gag_A 348 GELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQR-----QGKLDWDTTIHAFVPADAVANQHLAGAMTGR 422 (965)
T ss_dssp SCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHHHT-----TCCEEEETTTTEEEECSCCTTEEECGGGGTC
T ss_pred CCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHHhC-----CCcEEEcCcccccccCCCCCCEEEEEecCCc
Confidence 5555676664 5 679999999999999999887654 36899999887 899999999999975
Q ss_pred CCccCCcccccchHHHHHHHHHHHHHHHhc
Q 012165 328 PLKMYDRTARVEHVDHARQSAQHCIKALLS 357 (469)
Q Consensus 328 ~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~ 357 (469)
+. ...|..+|+.+|.+|++
T Consensus 423 ~~-----------l~~A~~~G~~aA~~i~~ 441 (965)
T 2gag_A 423 LD-----------TASALSTGAATGAAAAT 441 (965)
T ss_dssp CS-----------HHHHHHHHHHHHHHHHH
T ss_pred hh-----------HHHHHHHHHHHHHHHHH
Confidence 42 22688999999999865
No 83
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.96 E-value=1.6e-29 Score=256.69 Aligned_cols=283 Identities=15% Similarity=0.152 Sum_probs=187.5
Q ss_pred CcEEEEcCcHHHHHHHHHHHH---cCCCCCcEEEEcCCCCCC----CCC-CC-----------CcccccCCCCCCCCCCC
Q 012165 52 REFVIVGGGNAAGYAARTFVE---HGMADGRLCIVSKEAYAP----YER-PA-----------LTKGYLFPLDKKPARLP 112 (469)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~---~g~~~~~V~vie~~~~~~----~~~-~~-----------l~~~~~~~~~~~~~~~~ 112 (469)
+||+|||||+||+++|..|++ .|....+|+|+|+++..+ |.. +. +...+..........++
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 699999999999999999999 887212399999986543 110 00 00000000000000111
Q ss_pred CCcccc------C-----CCCCCCCHhHHHHCCcE--EEeCCcEEEEeCCCc----EEEeCC---C--eEEEeccEEecc
Q 012165 113 GFHTCV------G-----SGGERQTPEWYKEKGIE--MIYQDPVTSIDIEKQ----TLITNS---G--KLLKYGSLIVAT 170 (469)
Q Consensus 113 ~~~~~~------~-----~~~~~~~~~~~~~~~i~--~~~~~~v~~id~~~~----~v~~~~---g--~~~~yd~lVlAt 170 (469)
++.... . ........+++++.+++ ++++++|+.++.... +|++.+ | .++.||+||+||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 110000 0 00001122334556887 888889999987654 677654 4 568999999999
Q ss_pred C--CCCCcCCCCCCCC-cCc-EEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEeeeHH---HHH--
Q 012165 171 G--CTASRFPEKIGGY-LPG-VHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTRYEQ---LYQ-- 241 (469)
Q Consensus 171 G--~~~~~~~~~~g~~-~~~-v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~~~~~---~l~-- 241 (469)
| +.|+ .|.++|.+ .++ +.+..++.+. ....+++|+|||+|.+|+|+|..|++.+.+|+.+.. .+.
T Consensus 163 G~~s~p~-~p~ipG~~~~~g~~~hs~~~~~~-----~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~~~~ 236 (464)
T 2xve_A 163 GHFSTPY-VPEFEGFEKFGGRILHAHDFRDA-----LEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPMGYK 236 (464)
T ss_dssp CSSSSBC-CCCCBTTTTCCSEEEEGGGCCCG-----GGGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCCCCC
T ss_pred CCCCCCc-cCCCCCcccCCceEEehhhhCCH-----hHcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCCCCC
Confidence 9 7776 56667753 234 3332211111 123689999999999999999999999999882211 011
Q ss_pred -HcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCchhhh-cCCcccCC-CEEeCC---CCCCCC
Q 012165 242 -QNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFER-VGLNSSVG-GIQVDG---QFRTRM 315 (469)
Q Consensus 242 -~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~-~gl~~~~g-~i~Vd~---~~~t~~ 315 (469)
..||+++ ..|++++. + +|.++||+++++|.||+|+|++|+++++.. +++..+++ .+ ++. .++|+.
T Consensus 237 ~~~~V~~~--~~V~~i~~--~----~V~~~dG~~i~~D~Vi~atG~~p~~~~l~~~~gl~~~~~~~v-~~~~~~~~~t~~ 307 (464)
T 2xve_A 237 WPENWDER--PNLVRVDT--E----NAYFADGSSEKVDAIILCTGYIHHFPFLNDDLRLVTNNRLWP-LNLYKGVVWEDN 307 (464)
T ss_dssp CCTTEEEC--SCEEEECS--S----EEEETTSCEEECSEEEECCCBCCCCTTBCTTTCCCCCSSSCC-SSEETTTEESSS
T ss_pred CCCceEEc--CCeEEEeC--C----EEEECCCCEEeCCEEEECCCCCCCCCCcCcccccccCCCccc-ccccceEecCCC
Confidence 2578887 56888852 2 478899999999999999999999998876 67776654 44 443 356899
Q ss_pred CceEEeccccccCCccCCcccccchHHHHHHHHHHHHHHHhcCCC
Q 012165 316 PGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT 360 (469)
Q Consensus 316 ~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~~ 360 (469)
|+|||+|||+... .+..|..||+.+|++|.+...
T Consensus 308 p~i~aiGd~~~~~-----------~~~~a~~qa~~~a~~l~G~~~ 341 (464)
T 2xve_A 308 PKFFYIGMQDQWY-----------SFNMFDAQAWYARDVIMGRLP 341 (464)
T ss_dssp TTEEECSCSCCSS-----------CHHHHHHHHHHHHHHHTTSSC
T ss_pred CCEEEEeCccccc-----------chHHHHHHHHHHHHHHcCCCC
Confidence 9999999988632 455689999999999987543
No 84
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.96 E-value=1.9e-30 Score=275.98 Aligned_cols=276 Identities=17% Similarity=0.124 Sum_probs=188.9
Q ss_pred cCCcccccccccc---cccccCCCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCC
Q 012165 29 HSSAKNFQRRGFV---VAYSSFANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLD 105 (469)
Q Consensus 29 ~~~~~~~~~~~~~---~~~~~~~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~ 105 (469)
|.+||...++... +...+....++||+|||||+||++||..|+++|+ +|+|+|+++..+.. .... ...+..
T Consensus 366 C~vnp~~g~e~~~~~~~~~~~~~~~~~~VvIIGgG~AGl~aA~~La~~G~---~V~liE~~~~~GG~-~~~~--~~~p~~ 439 (690)
T 3k30_A 366 CTQNPSMGEEWRRGWHPERIRAKESDARVLVVGAGPSGLEAARALGVRGY---DVVLAEAGRDLGGR-VTQE--SALPGL 439 (690)
T ss_dssp CSSCTTTTTTTTTCCCSSCCCCCSSCCEEEEECCSHHHHHHHHHHHHHTC---EEEEECSSSSSCTH-HHHH--HTSTTC
T ss_pred CCcCcccCcccccccCccccCcccccceEEEECCCHHHHHHHHHHHHCCC---eEEEEecCCCCCCE-eeec--cCCCch
Confidence 8899875544321 1222344567899999999999999999999987 79999998765432 0000 001100
Q ss_pred CCCCCCCCCccccCCCCCCCCHhHHHHC-CcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCC-------cC
Q 012165 106 KKPARLPGFHTCVGSGGERQTPEWYKEK-GIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS-------RF 177 (469)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~-------~~ 177 (469)
.....+ .......+.+. +++++++++++ .+++.++.||+||+|||+.++ ..
T Consensus 440 ~~~~~~-----------~~~~~~~~~~~~gv~~~~~~~v~----------~~~~~~~~~d~lvlAtG~~~~~~~~~~~~~ 498 (690)
T 3k30_A 440 SAWGRV-----------KEYREAVLAELPNVEIYRESPMT----------GDDIVEFGFEHVITATGATWRTDGVARFHT 498 (690)
T ss_dssp GGGGHH-----------HHHHHHHHHTCTTEEEESSCCCC----------HHHHHHTTCCEEEECCCEEECSSCCSSSCS
T ss_pred hHHHHH-----------HHHHHHHHHHcCCCEEEECCeec----------HHHHhhcCCCEEEEcCCCccccccccccCC
Confidence 000000 11223445555 88888875432 233445789999999999853 13
Q ss_pred CCCCCCCcCcEEEecCHHHHHHHHHhhhcCCeEEEEc--CChHHHHHHHHHHhCCCeEe-------------------ee
Q 012165 178 PEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVG--GGYIGMEVAAAAVGWKLDTT-------------------RY 236 (469)
Q Consensus 178 ~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG--~G~~g~e~A~~l~~~g~~v~-------------------~~ 236 (469)
|.++|.+.+++++. .+ .+......+++++||| +|.+|+|+|..|.++|.+|+ .+
T Consensus 499 ~~i~G~~~~~v~~~---~~--~l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~~~~~~~l 573 (690)
T 3k30_A 499 TALPIAEGMQVLGP---DD--LFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTFEVNRI 573 (690)
T ss_dssp SCCCBCTTSEEECH---HH--HHTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGGGGTCHHHH
T ss_pred CCCCCCCCCcEEcH---HH--HhCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccccchhHHHH
Confidence 45566554444432 22 2222345678899999 99999999999999999887 34
Q ss_pred HHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCchhhhcCCcccCCCEEeCCCCCCCCC
Q 012165 237 EQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMP 316 (469)
Q Consensus 237 ~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~Vd~~~~t~~~ 316 (469)
.+.+++.||++++++.|++++.+ +..+..+...+++++++|.||+|+|++|++.+++.++... . +|+.|
T Consensus 574 ~~~l~~~GV~i~~~~~V~~i~~~-~~~v~~~~~~~~~~i~aD~VV~A~G~~p~~~l~~~l~~~~---~-------~t~~~ 642 (690)
T 3k30_A 574 QRRLIENGVARVTDHAVVAVGAG-GVTVRDTYASIERELECDAVVMVTARLPREELYLDLVARR---D-------AGEIA 642 (690)
T ss_dssp HHHHHHTTCEEEESEEEEEEETT-EEEEEETTTCCEEEEECSEEEEESCEEECCHHHHHHHHHH---H-------HTSCS
T ss_pred HHHHHHCCCEEEcCcEEEEEECC-eEEEEEccCCeEEEEECCEEEECCCCCCChHHHHHHhhhh---c-------ccCCC
Confidence 67788999999999999999832 2111111123556899999999999999998877643221 1 78999
Q ss_pred ceEEeccccccCCccCCcccccchHHHHHHHHHHHHHHHhcC
Q 012165 317 GIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSA 358 (469)
Q Consensus 317 ~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~ 358 (469)
+|||+|||+..+ .+..|..+|+.+|.+|.+.
T Consensus 643 ~VyaiGD~~~~~-----------~~~~A~~~g~~aa~~i~~~ 673 (690)
T 3k30_A 643 SVRGIGDAWAPG-----------TIAAAVWSGRRAAEEFDAV 673 (690)
T ss_dssp EEEECGGGTSCB-----------CHHHHHHHHHHHHHHTTCC
T ss_pred CEEEEeCCCchh-----------hHHHHHHHHHHHHHHHHhh
Confidence 999999999742 3455999999999999864
No 85
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.96 E-value=1.6e-29 Score=255.56 Aligned_cols=268 Identities=18% Similarity=0.226 Sum_probs=180.7
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHH-c------CCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVE-H------GMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGG 122 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~-~------g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (469)
.+++|+|||||+||+++|..|++ . +. +|+|||+++.+ |... ..+ ..+.......+
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~---~V~lie~~~~~-gg~~--~~g-v~p~~~~~~~~----------- 63 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDM---AVDMLEMLPTP-WGLV--RSG-VAPDHPKIKSI----------- 63 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCE---EEEEEESSSSC-STHH--HHT-SCTTCTGGGGG-----------
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCC---eEEEEecCCCC-CCcc--ccc-cCCCCCCHHHH-----------
Confidence 35799999999999999999999 7 65 89999998764 3211 000 11110000000
Q ss_pred CCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCCcCCCCCCCCcCcEEEecCHHHHH----
Q 012165 123 ERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADAD---- 198 (469)
Q Consensus 123 ~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~---- 198 (469)
.....+++++.+++++.+..+ ++.|+++++ ++.||+||||||+.+...+.++|.+.+++++.+++....
T Consensus 64 ~~~~~~~~~~~~v~~~~~v~v------~~~v~~~~~-~~~~d~lViAtG~~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~ 136 (456)
T 1lqt_A 64 SKQFEKTAEDPRFRFFGNVVV------GEHVQPGEL-SERYDAVIYAVGAQSDRMLNIPGEDLPGSIAAVDFVGWYNAHP 136 (456)
T ss_dssp HHHHHHHHTSTTEEEEESCCB------TTTBCHHHH-HHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCG
T ss_pred HHHHHHHHhcCCCEEEeeEEE------CCEEEECCC-eEeCCEEEEeeCCCCCCCCCCCCCCCCCcEEHHHHHhhhhcCc
Confidence 122345566789999887543 234555555 379999999999973235567887778887754332100
Q ss_pred HHHHhh--hcCCeEEEEcCChHHHHHHHHHHhC--------------------CC-eEe------ee-------------
Q 012165 199 ALISSL--EKAKKVVVVGGGYIGMEVAAAAVGW--------------------KL-DTT------RY------------- 236 (469)
Q Consensus 199 ~~~~~~--~~~~~vvVvG~G~~g~e~A~~l~~~--------------------g~-~v~------~~------------- 236 (469)
.+.... ..+++++|||+|++|+|+|..|.+. +. +|+ .+
T Consensus 137 d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~ 216 (456)
T 1lqt_A 137 HFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELA 216 (456)
T ss_dssp GGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGG
T ss_pred ccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHhh
Confidence 000001 1578999999999999999999874 43 565 00
Q ss_pred --------------------------------HHHH----HH------cCcEEEcCCeEEEEEeCCCCcEEEEEcC----
Q 012165 237 --------------------------------EQLY----QQ------NGVKFVKGASIKNLEAGSDGRVAAVKLE---- 270 (469)
Q Consensus 237 --------------------------------~~~l----~~------~gV~~~~~~~v~~i~~~~~~~v~~v~~~---- 270 (469)
.+.+ ++ +||++++++.+.++..+ +.+.+|++.
T Consensus 217 ~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~--~~v~~v~~~~~~~ 294 (456)
T 1lqt_A 217 DLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGK--RKVERIVLGRNEL 294 (456)
T ss_dssp GCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECS--SSCCEEEEEEEEE
T ss_pred cCCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecC--CcEeEEEEEEEEe
Confidence 1122 23 78999999999999843 444345443
Q ss_pred ------------CC--CEEeCCEEEEccCCccCCchhhhcCCccc-CCCEEeCCCCC-CCCCceEEeccccccCCccCCc
Q 012165 271 ------------DG--STIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFR-TRMPGIFAIGDVAAFPLKMYDR 334 (469)
Q Consensus 271 ------------~g--~~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~Vd~~~~-t~~~~Vfa~GD~a~~~~~~~~~ 334 (469)
+| ++++||+||+++|++|++ + .++..+ ++++.+|+++| |+.|+|||+|||+..|...
T Consensus 295 ~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~-l---~gl~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp~~~--- 367 (456)
T 1lqt_A 295 VSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVP-T---PGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTGV--- 367 (456)
T ss_dssp EECSSSSEEEEEEEEEEEEECSEEEECSCEECCC-C---TTSCCBTTTTBCCEETTEETTCSSEEECTHHHHCSCSC---
T ss_pred cCCCcccccccCCCceEEEEcCEEEEccccccCC-C---CCCcccCCCCeeECCCCcCCCCCCEEEEeccCCCCchh---
Confidence 34 469999999999999986 3 355554 57899999999 7999999999999765421
Q ss_pred ccccchHHHHHHHHHHHHHHHhc
Q 012165 335 TARVEHVDHARQSAQHCIKALLS 357 (469)
Q Consensus 335 ~~~~~~~~~A~~~a~~~a~~i~~ 357 (469)
+..|+.+|..+|.+|+.
T Consensus 368 ------i~~a~~~g~~~a~~i~~ 384 (456)
T 1lqt_A 368 ------IGTNKKDAQDTVDTLIK 384 (456)
T ss_dssp ------TTHHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHHHHH
Confidence 22366777777777754
No 86
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.96 E-value=1.3e-28 Score=261.39 Aligned_cols=270 Identities=18% Similarity=0.182 Sum_probs=186.1
Q ss_pred CCCCccccc-------ccCCcccccccccccccccCCCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC
Q 012165 19 PQSPSLHRI-------RHSSAKNFQRRGFVVAYSSFANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY 91 (469)
Q Consensus 19 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~ 91 (469)
.|+..|... .|.+||....+. ... ......++||+|||||+||++||..|++.|+ +|+|||+++.+++
T Consensus 336 ~c~~~C~~~~~~~~~~~C~~np~~~~e~-~~~-~~~~~~~~~vvIIGgG~AGl~aA~~l~~~g~---~V~lie~~~~~gg 410 (671)
T 1ps9_A 336 GCNQACLDQIFVGKVTSCLVNPRACHET-KMP-ILPAVQKKNLAVVGAGPAGLAFAINAAARGH---QVTLFDAHSEIGG 410 (671)
T ss_dssp CCCTTTHHHHHTTCCCCCSSCTTTTCTT-TSC-CCSCSSCCEEEEECCSHHHHHHHHHHHTTTC---EEEEEESSSSSCT
T ss_pred ccccccchhccCCCceEEEeCccccccc-ccC-CCCCCCCCeEEEECCCHHHHHHHHHHHhCCC---eEEEEeCCCCCCC
Confidence 566656421 188888654332 111 2234557899999999999999999999987 7999999887654
Q ss_pred CCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCeEE-EeccEEecc
Q 012165 92 ERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLL-KYGSLIVAT 170 (469)
Q Consensus 92 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~-~yd~lVlAt 170 (469)
. ..++. ..+... . +... .....+++++.+++++.++.|.. ..+ .||+|||||
T Consensus 411 ~-~~~~~--~~~~~~---~---~~~~-----~~~~~~~~~~~gv~~~~~~~v~~-------------~~~~~~d~lviAt 463 (671)
T 1ps9_A 411 Q-FNIAK--QIPGKE---E---FYET-----LRYYRRMIEVTGVTLKLNHTVTA-------------DQLQAFDETILAS 463 (671)
T ss_dssp T-HHHHT--TSTTCT---T---HHHH-----HHHHHHHHHHHTCEEEESCCCCS-------------SSSCCSSEEEECC
T ss_pred e-eeccc--cCCCHH---H---HHHH-----HHHHHHHHHHcCCEEEeCcEecH-------------HHhhcCCEEEEcc
Confidence 3 11111 001000 0 0000 01233556778999999865531 114 899999999
Q ss_pred CCCCCcCCCCCCCCcCcEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeE-----------------
Q 012165 171 GCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDT----------------- 233 (469)
Q Consensus 171 G~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v----------------- 233 (469)
|++|+ .|.++|.+.+++++.. +.+......+++|+|||+|.+|+|+|..|++.|.++
T Consensus 464 G~~p~-~~~i~G~~~~~v~~~~-----~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~ 537 (671)
T 1ps9_A 464 GIVPR-TPPIDGIDHPKVLSYL-----DVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSL 537 (671)
T ss_dssp CEEEC-CCCCBTTTSTTEEEHH-----HHHTSCCCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTC
T ss_pred CCCcC-CCCCCCCCCCcEeeHH-----HHhhCCCCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccc
Confidence 99987 4667776656666542 222222346799999999999999999999877432
Q ss_pred --------------------e-------------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCC--
Q 012165 234 --------------------T-------------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG-- 272 (469)
Q Consensus 234 --------------------~-------------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g-- 272 (469)
+ .+.+.+++.||++++++.+++++. ++ + .+. .+|
T Consensus 538 ~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~--~~-v-~~~-~~G~~ 612 (671)
T 1ps9_A 538 QQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDD--DG-L-HVV-INGET 612 (671)
T ss_dssp CSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEET--TE-E-EEE-ETTEE
T ss_pred cccccccccccccCCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEeC--Ce-E-EEe-cCCeE
Confidence 1 125678899999999999999973 32 2 232 577
Q ss_pred CEEeCCEEEEccCCccCCchhhhcCCcccCCCEEeCCCCCCCCCceEEeccccccCCccCCcccccchHHHHHHHHHHHH
Q 012165 273 STIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCI 352 (469)
Q Consensus 273 ~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a 352 (469)
+++++|.||+++|++||+++++.+. ...++||++|||+..... .+..|+.+|..+|
T Consensus 613 ~~i~~D~Vi~a~G~~p~~~l~~~l~---------------~~g~~v~aiGD~~~~~~~---------~~~~A~~~g~~aA 668 (671)
T 1ps9_A 613 QVLAVDNVVICAGQEPNRALAQPLI---------------DSGKTVHLIGGCDVAMEL---------DARRAIAQGTRLA 668 (671)
T ss_dssp EEECCSEEEECCCEEECCTTHHHHH---------------TTTCCEEECGGGTCCSSC---------CHHHHHHHHHHHH
T ss_pred EEEeCCEEEECCCccccHHHHHHHH---------------hcCCCEEEECCcCccCch---------hHHHHHHHHHHHH
Confidence 5799999999999999998876531 123689999999975421 4667999999999
Q ss_pred HHH
Q 012165 353 KAL 355 (469)
Q Consensus 353 ~~i 355 (469)
.+|
T Consensus 669 ~~i 671 (671)
T 1ps9_A 669 LEI 671 (671)
T ss_dssp HHC
T ss_pred HhC
Confidence 875
No 87
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.95 E-value=5.4e-28 Score=246.19 Aligned_cols=272 Identities=15% Similarity=0.130 Sum_probs=170.8
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCC---CcEEEEcCCCCCCCCCCCCcccccCC--C--C----CCCCCCCCCccc-
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMAD---GRLCIVSKEAYAPYERPALTKGYLFP--L--D----KKPARLPGFHTC- 117 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~---~~V~vie~~~~~~~~~~~l~~~~~~~--~--~----~~~~~~~~~~~~- 117 (469)
.++||+|||||+||+++|..|++.|. + .+|+|||+++.++|....+....... . + ..+.....+...
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~-~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l 107 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQ-AQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYL 107 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHH-HHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhccc-ccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhh
Confidence 35699999999999999999999982 2 38999999998765432111000000 0 0 000000000000
Q ss_pred --cC--------CCCC-------CCCHhHHHHCCcEEEeCCcEEEEeCC---Cc----EEEeCCCe----EEEeccEEec
Q 012165 118 --VG--------SGGE-------RQTPEWYKEKGIEMIYQDPVTSIDIE---KQ----TLITNSGK----LLKYGSLIVA 169 (469)
Q Consensus 118 --~~--------~~~~-------~~~~~~~~~~~i~~~~~~~v~~id~~---~~----~v~~~~g~----~~~yd~lVlA 169 (469)
.+ .... .......++.++.++++++|+.++.. ++ +|++.++. ++.||+||+|
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlA 187 (463)
T 3s5w_A 108 HKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVS 187 (463)
T ss_dssp HHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEEC
T ss_pred hhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEEC
Confidence 00 0000 00111223457889999899999876 43 66666665 7999999999
Q ss_pred cCCCCCcCCC-CCCCCcC-cEEEecCHHH-HHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhC--CCeEeee--------
Q 012165 170 TGCTASRFPE-KIGGYLP-GVHYIRDVAD-ADALISSLEKAKKVVVVGGGYIGMEVAAAAVGW--KLDTTRY-------- 236 (469)
Q Consensus 170 tG~~~~~~~~-~~g~~~~-~v~~~~~~~~-~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~--g~~v~~~-------- 236 (469)
||+.|. .|. +++.... .+.+.....+ ...+......+++|+|||+|.+|+|+|..|.+. +.+|+.+
T Consensus 188 tG~~p~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p 266 (463)
T 3s5w_A 188 PGGTPR-IPQVFRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKP 266 (463)
T ss_dssp CCCEEC-CCGGGGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCB
T ss_pred CCCCCC-CcchhhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcC
Confidence 999876 443 2221111 3343332222 112211122589999999999999999999998 7777610
Q ss_pred ------------------------------HHHHHH--------------------------cCcEEEcCCeEEEEEeCC
Q 012165 237 ------------------------------EQLYQQ--------------------------NGVKFVKGASIKNLEAGS 260 (469)
Q Consensus 237 ------------------------------~~~l~~--------------------------~gV~~~~~~~v~~i~~~~ 260 (469)
.+.+.. .||++++++.|++++.++
T Consensus 267 ~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~ 346 (463)
T 3s5w_A 267 ADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATA 346 (463)
T ss_dssp CCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEET
T ss_pred ccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecC
Confidence 011111 599999999999998643
Q ss_pred CCcEEEEEcC---CCCE--EeCCEEEEccCCccC--CchhhhcCCcccCCCEEeCCCCCCC-----CCceEEecccccc
Q 012165 261 DGRVAAVKLE---DGST--IDADTIVIGIGAKPT--VSPFERVGLNSSVGGIQVDGQFRTR-----MPGIFAIGDVAAF 327 (469)
Q Consensus 261 ~~~v~~v~~~---~g~~--i~~D~vi~a~G~~p~--~~~~~~~gl~~~~g~i~Vd~~~~t~-----~~~Vfa~GD~a~~ 327 (469)
+ . ..+.+. +|+. +++|.||+|+|++|+ .++++++.... |++.||+++++. .|+|||+|||...
T Consensus 347 ~-~-~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~~l~~~~--g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~ 421 (463)
T 3s5w_A 347 Q-G-IELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPLAEYL--GDHEIGRDYRLQTDERCKVAIYAQGFSQAS 421 (463)
T ss_dssp T-E-EEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTGGGGGGB--C--CCCTTSBCCBCTTBCSEEEESSCCHHH
T ss_pred C-E-EEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhHHHHHHh--CCcccCcccccccCCCCCCeEEEcCCCccc
Confidence 3 3 245555 6754 999999999999999 67777654433 789999999873 4679999999864
No 88
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.95 E-value=7.2e-28 Score=243.96 Aligned_cols=286 Identities=12% Similarity=0.081 Sum_probs=184.8
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCC----CCCC-C----Cccc-------ccCC-------CC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP----YERP-A----LTKG-------YLFP-------LD 105 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~----~~~~-~----l~~~-------~~~~-------~~ 105 (469)
++.+||+|||||+||+++|..|++.|. ..+|+|+|+.+..+ |... . ++.. .+.. ..
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~-~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~ 82 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKA-FDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPS 82 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTC-CSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCC
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCC-CCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccC
Confidence 346899999999999999999999986 45799999986442 1110 0 0000 0000 00
Q ss_pred CCCC-----------CCCCCccccCCCC-------CCCCHhHHHHCCcEEEeCCcEEEEeCCCc--EEEeCC---Ce---
Q 012165 106 KKPA-----------RLPGFHTCVGSGG-------ERQTPEWYKEKGIEMIYQDPVTSIDIEKQ--TLITNS---GK--- 159 (469)
Q Consensus 106 ~~~~-----------~~~~~~~~~~~~~-------~~~~~~~~~~~~i~~~~~~~v~~id~~~~--~v~~~~---g~--- 159 (469)
.... .++++........ .....++.++.+..++++++|+.++.... +|++.+ |+
T Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~ 162 (447)
T 2gv8_A 83 PLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPIS 162 (447)
T ss_dssp CCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEE
T ss_pred chhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeE
Confidence 0000 0000000000000 00112233344667888999999987654 566654 65
Q ss_pred EEEeccEEeccCC--CCCcCCCCCCCCc-----Cc-EEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCC
Q 012165 160 LLKYGSLIVATGC--TASRFPEKIGGYL-----PG-VHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKL 231 (469)
Q Consensus 160 ~~~yd~lVlAtG~--~~~~~~~~~g~~~-----~~-v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~ 231 (469)
++.||+||+|||. .|+ .|.++|.+. ++ +.+..++.+.. ...+++|+|||+|.+|+|+|..|++.+.
T Consensus 163 ~~~~d~VVvAtG~~s~p~-~p~i~G~~~~~~~~~g~v~~~~~~~~~~-----~~~~k~VvVvG~G~sg~e~A~~l~~~~~ 236 (447)
T 2gv8_A 163 KDIFDAVSICNGHYEVPY-IPNIKGLDEYAKAVPGSVLHSSLFREPE-----LFVGESVLVVGGASSANDLVRHLTPVAK 236 (447)
T ss_dssp EEEESEEEECCCSSSSBC-BCCCBTHHHHHHHSTTSEEEGGGCCCGG-----GGTTCCEEEECSSHHHHHHHHHHTTTSC
T ss_pred EEEeCEEEECCCCCCCCC-CCCCCChhhhhccCCccEEEecccCChh-----hcCCCEEEEEccCcCHHHHHHHHHHHhC
Confidence 7999999999998 554 555565321 22 44332222211 1368999999999999999999999999
Q ss_pred e-EeeeHH---HHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCE-EeCCEEEEccCCccCCch-----hhhc--CCc
Q 012165 232 D-TTRYEQ---LYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGST-IDADTIVIGIGAKPTVSP-----FERV--GLN 299 (469)
Q Consensus 232 ~-v~~~~~---~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~-i~~D~vi~a~G~~p~~~~-----~~~~--gl~ 299 (469)
+ |+.+.. .++..||.+ ...|+++..+ ++ .|.++||+. +++|.||+|+|++|++++ ++++ ++.
T Consensus 237 ~~V~l~~r~~~~l~~~~i~~--~~~v~~~~~~-~~---~v~~~dG~~~~~~D~vi~atG~~~~~~~l~~~~l~~~~~~i~ 310 (447)
T 2gv8_A 237 HPIYQSLLGGGDIQNESLQQ--VPEITKFDPT-TR---EIYLKGGKVLSNIDRVIYCTGYLYSVPFPSLAKLKSPETKLI 310 (447)
T ss_dssp SSEEEECTTCCSCBCSSEEE--ECCEEEEETT-TT---EEEETTTEEECCCSEEEECCCBCCCCCCHHHHSCCSTTTCCC
T ss_pred CcEEEEeCCCCcCCCCCeEE--ecCeEEEecC-CC---EEEECCCCEeccCCEEEECCCCCcCCCCCcccccccccCcee
Confidence 8 872221 145667875 4568888632 22 578899976 799999999999999999 7654 233
Q ss_pred ccCCCEEeCCCCC---CCCCceEEeccccccCCccCCcccccchHHHHHHHHHHHHHHHhcCC
Q 012165 300 SSVGGIQVDGQFR---TRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQ 359 (469)
Q Consensus 300 ~~~g~i~Vd~~~~---t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~~~ 359 (469)
.+ +.+.++.+.+ +++|++|++||+.... .+..|..||+.+|++|.+..
T Consensus 311 ~~-~~~~~~~~~~v~~~~~p~l~~~G~~~~~~-----------~~~~a~~qa~~~a~~~~g~~ 361 (447)
T 2gv8_A 311 DD-GSHVHNVYQHIFYIPDPTLAFVGLALHVV-----------PFPTSQAQAAFLARVWSGRL 361 (447)
T ss_dssp SS-SSSCCSEETTTEETTCTTEEESSCCBSSC-----------HHHHHHHHHHHHHHHHTTSS
T ss_pred cC-CCcccccccccccCCCCcEEEEecccccc-----------CchHHHHHHHHHHHHHcCCC
Confidence 32 4455555555 6899999999997631 45678999999999998743
No 89
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.93 E-value=2.1e-25 Score=229.85 Aligned_cols=281 Identities=17% Similarity=0.208 Sum_probs=180.6
Q ss_pred CCCcEEEEcCcHHHHHHHHHHH-HcCCCCCcEEEEcCCCCCCC-----CCCCC----c-ccccCCCCCC---CCCCCCCc
Q 012165 50 ENREFVIVGGGNAAGYAARTFV-EHGMADGRLCIVSKEAYAPY-----ERPAL----T-KGYLFPLDKK---PARLPGFH 115 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~-~~g~~~~~V~vie~~~~~~~-----~~~~l----~-~~~~~~~~~~---~~~~~~~~ 115 (469)
+++||+|||||+||+++|..|+ +.|+ +|+|+|+++..+. ..|.. . +.+....... ...+....
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~---~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~ 83 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGL---TTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTY 83 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCC---CEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCC---CEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccC
Confidence 4579999999999999999999 8776 8999999765431 11111 0 0010000000 00000000
Q ss_pred cccCCCCCCCCHhHHHHCCc--EEEeCCcEEEEeCCCc----EEEeCCCeEEEeccEEeccC--CCCCcCCCCCCCC-cC
Q 012165 116 TCVGSGGERQTPEWYKEKGI--EMIYQDPVTSIDIEKQ----TLITNSGKLLKYGSLIVATG--CTASRFPEKIGGY-LP 186 (469)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~i--~~~~~~~v~~id~~~~----~v~~~~g~~~~yd~lVlAtG--~~~~~~~~~~g~~-~~ 186 (469)
....+......+..++.++ .++++++|++++.+.. +|++++|+++.||+||+||| +.|. .|.++|.+ ..
T Consensus 84 -~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~-~p~ipG~~~f~ 161 (540)
T 3gwf_A 84 -ITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAIN-FPNLPGLDTFE 161 (540)
T ss_dssp -EEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBC-CCCCTTGGGCC
T ss_pred -CCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCC-CCCCCCccccC
Confidence 0000001112334567787 7888999999987665 78899999999999999999 5665 56666643 33
Q ss_pred cEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe-------------------eeHHHHH------
Q 012165 187 GVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT-------------------RYEQLYQ------ 241 (469)
Q Consensus 187 ~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~-------------------~~~~~l~------ 241 (469)
+.......+. ......+++|+|||+|.+|+|+|..|++.+.+++ .+++.++
T Consensus 162 g~~~~~~~~~----~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~~~~ 237 (540)
T 3gwf_A 162 GETIHTAAWP----EGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKADYDRI 237 (540)
T ss_dssp SEEEEGGGCC----SSCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHHHHHHHTHHHH
T ss_pred CCEEEeecCC----CccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHHHHHHhccHHH
Confidence 3221111110 1123468999999999999999999999998887 0111111
Q ss_pred --------------------------------------------------------------------------------
Q 012165 242 -------------------------------------------------------------------------------- 241 (469)
Q Consensus 242 -------------------------------------------------------------------------------- 241 (469)
T Consensus 238 ~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp~~~ 317 (540)
T 3gwf_A 238 WERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIEDPETA 317 (540)
T ss_dssp HHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHHHHHHCCSHHHH
T ss_pred HHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence
Q ss_pred ------------------------HcCcEEEc--CCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCchhhh
Q 012165 242 ------------------------QNGVKFVK--GASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFER 295 (469)
Q Consensus 242 ------------------------~~gV~~~~--~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~ 295 (469)
+.+|+++. +..|++|+++ +|.++||+++++|+||+|||+++++.++..
T Consensus 318 ~~l~P~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~------gv~~~dG~~~~~DvIV~ATGf~~~~~~~~~ 391 (540)
T 3gwf_A 318 RKLMPKGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAK------GVVTEDGVLHELDVLVFATGFDAVDGNYRR 391 (540)
T ss_dssp HHHCCCSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSS------EEEETTCCEEECSEEEECCCBSCSSHHHHT
T ss_pred HhCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEecC------eEEcCCCCEEECCEEEECCccCccccCcCc
Confidence 45788885 6789999743 688999999999999999999998766665
Q ss_pred cCCcccCCCEEeCC--------C--CCC-CCCceEEe-ccccccCCccCCcccccchHHHHHHHHHHHHHHHh
Q 012165 296 VGLNSSVGGIQVDG--------Q--FRT-RMPGIFAI-GDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALL 356 (469)
Q Consensus 296 ~gl~~~~g~i~Vd~--------~--~~t-~~~~Vfa~-GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~ 356 (469)
.++... +|+.+++ + +.+ ..||+|.+ |+.+.... ....+..|++++++.|.
T Consensus 392 ~~i~g~-~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~~s----------~~~~~e~q~~~i~~~i~ 453 (540)
T 3gwf_A 392 IEIRGR-DGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGPFTN----------LPPSIETQVEWISDTIG 453 (540)
T ss_dssp SEEECG-GGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCBCSC----------HHHHHHHHHHHHHHHHH
T ss_pred ceEECC-CCcCHHHhhccChhhccccccCCCCceEEEecCCCCCcc----------HHHHHHHHHHHHHHHHH
Confidence 444322 2333332 1 222 78999999 87654111 23346677888877663
No 90
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.90 E-value=1.6e-23 Score=216.15 Aligned_cols=181 Identities=18% Similarity=0.170 Sum_probs=109.4
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC-----CCCCC----cc---cccCCCCC-CCCCCCCCc
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY-----ERPAL----TK---GYLFPLDK-KPARLPGFH 115 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~-----~~~~l----~~---~~~~~~~~-~~~~~~~~~ 115 (469)
+.++||||||||+||+++|..|++.|+ +|+|+|+++..+. ..|.. .. .+.+.... ....+....
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~---~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~ 83 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGM---KVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENF 83 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCC---CEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccC
Confidence 446899999999999999999999887 7999999865421 00110 00 00000000 000000000
Q ss_pred cccCCCCCCCCHhHHHHCCc--EEEeCCcEEEEeCCCc----EEEeCCCeEEEeccEEeccC--CCCCcCCCCCCCC-cC
Q 012165 116 TCVGSGGERQTPEWYKEKGI--EMIYQDPVTSIDIEKQ----TLITNSGKLLKYGSLIVATG--CTASRFPEKIGGY-LP 186 (469)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~i--~~~~~~~v~~id~~~~----~v~~~~g~~~~yd~lVlAtG--~~~~~~~~~~g~~-~~ 186 (469)
....+.........++.++ .++++++|++++.+.. +|++++|+++.||+||+||| +.|. .|.++|.+ ..
T Consensus 84 -~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~-~p~ipG~~~f~ 161 (545)
T 3uox_A 84 -ASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASR-MPDIKGIDSFK 161 (545)
T ss_dssp -CBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC----CCCTTGGGCC
T ss_pred -CCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCc-CCCCCCccccC
Confidence 0000000112233456676 6888899999987654 88899999999999999999 7776 56666643 23
Q ss_pred cE--EEecCHHHHHHHH-HhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe
Q 012165 187 GV--HYIRDVADADALI-SSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT 234 (469)
Q Consensus 187 ~v--~~~~~~~~~~~~~-~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~ 234 (469)
+. ++.....+..... .....+++|+|||+|.+|+|+|..|++.+.+++
T Consensus 162 g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vt 212 (545)
T 3uox_A 162 GESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELY 212 (545)
T ss_dssp SEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEE
T ss_pred CCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEE
Confidence 32 2211111100000 012368999999999999999999999988876
No 91
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.90 E-value=4.8e-23 Score=212.71 Aligned_cols=178 Identities=18% Similarity=0.169 Sum_probs=112.1
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC----C-CCCC----cc-cccCCCCCC---CCCCCCCc
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY----E-RPAL----TK-GYLFPLDKK---PARLPGFH 115 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~----~-~~~l----~~-~~~~~~~~~---~~~~~~~~ 115 (469)
..++||+|||||+||+++|..|++.|+ +|+|+|+++..+. . .|.. .. .+....... ...+....
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~---~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~ 95 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGL---TVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKY 95 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSS
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCC---CEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCC
Confidence 445799999999999999999999887 8999999765431 0 0111 00 000000000 00000000
Q ss_pred cccCCCCCCCCHhHHHHCCc--EEEeCCcEEEEeCCCc----EEEeCCCeEEEeccEEeccC--CCCCcCCCCCCCC-cC
Q 012165 116 TCVGSGGERQTPEWYKEKGI--EMIYQDPVTSIDIEKQ----TLITNSGKLLKYGSLIVATG--CTASRFPEKIGGY-LP 186 (469)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~i--~~~~~~~v~~id~~~~----~v~~~~g~~~~yd~lVlAtG--~~~~~~~~~~g~~-~~ 186 (469)
....+......+..++.++ .++++++|++++.+.. +|++.+|+++.||+||+||| +.|. .|.++|.+ ..
T Consensus 96 -~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~-~p~ipG~~~f~ 173 (549)
T 4ap3_A 96 -ATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNAN-TPAFDGLDRFT 173 (549)
T ss_dssp -CBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECC-CCCCTTGGGCC
T ss_pred -CCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCC-CCCCCCcccCC
Confidence 0000000112234566777 7888999999987665 88899999999999999999 7776 56667643 33
Q ss_pred cEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe
Q 012165 187 GVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT 234 (469)
Q Consensus 187 ~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~ 234 (469)
+.......++.+ .....+++|+|||+|.+|+|+|..|++.+.+++
T Consensus 174 g~~~~~~~~~~~---~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vt 218 (549)
T 4ap3_A 174 GDIVHTARWPHD---GVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLF 218 (549)
T ss_dssp SEEEEGGGCCTT---CCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEE
T ss_pred CceEEecccccc---ccccCCCEEEEECCCchHHHHHHHHHhhCCEEE
Confidence 322211111100 012368999999999999999999999988886
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.89 E-value=3.1e-22 Score=207.17 Aligned_cols=284 Identities=16% Similarity=0.229 Sum_probs=173.6
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC-----CCCCCcc---cccCCCCCCC-----CCCCCCc
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY-----ERPALTK---GYLFPLDKKP-----ARLPGFH 115 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~-----~~~~l~~---~~~~~~~~~~-----~~~~~~~ 115 (469)
+..+||+|||||++|+++|..|++.|+ +|+|+|+++..+. ..|...- .......... ..++...
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~---~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~ 90 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGR---SVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERY 90 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCC---CEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCccccc
Confidence 345799999999999999999999987 7999999875421 0011100 0000000000 0000000
Q ss_pred cccCCCCCCCCHhHHHHCC--cEEEeCCcEEEEeCCC----cEEEeCCCeEEEeccEEeccCC--CCCcCCCCCCCC-cC
Q 012165 116 TCVGSGGERQTPEWYKEKG--IEMIYQDPVTSIDIEK----QTLITNSGKLLKYGSLIVATGC--TASRFPEKIGGY-LP 186 (469)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~--i~~~~~~~v~~id~~~----~~v~~~~g~~~~yd~lVlAtG~--~~~~~~~~~g~~-~~ 186 (469)
..............++.+ ..++++++|++++.+. .+|++++|+++.||+||+|||. .|. .|.++|.+ ..
T Consensus 91 -~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~-~p~i~G~~~f~ 168 (542)
T 1w4x_A 91 -ASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQ-LPNFPGLKDFA 168 (542)
T ss_dssp -CBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCC-CCCCTTGGGCC
T ss_pred -CCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCC-CCCCCCcccCC
Confidence 000000001112234444 5688899999987643 2688888988999999999994 554 56666643 34
Q ss_pred cEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe-------e------------e-----------
Q 012165 187 GVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT-------R------------Y----------- 236 (469)
Q Consensus 187 ~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~-------~------------~----------- 236 (469)
|.......+..+. ....+++|+|||+|.+|+|++..+++.+.+++ . .
T Consensus 169 G~~~hs~~~~~~~---~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~~~~~~~~~~~~~~~~p~l 245 (542)
T 1w4x_A 169 GNLYHTGNWPHEP---VDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDPEFLADLKKRYAEF 245 (542)
T ss_dssp SEEEEGGGCCSSC---CCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCCCBCCHHHHHHHHTTHHHH
T ss_pred CceEECCCCCCch---hccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCCCCCCHHHHHHHHhhCHHH
Confidence 4222111111000 12368999999999999999999988877665 0 0
Q ss_pred --------------------------------HH----------------------------------------------
Q 012165 237 --------------------------------EQ---------------------------------------------- 238 (469)
Q Consensus 237 --------------------------------~~---------------------------------------------- 238 (469)
..
T Consensus 246 ~~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (542)
T 1w4x_A 246 REESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDPEVAER 325 (542)
T ss_dssp HHHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHHHHHHHHCSSHHHHHH
T ss_pred HHHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHcCCHHHHHh
Confidence 00
Q ss_pred ---------------------HHHHcCcEEE--cCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCchhhh
Q 012165 239 ---------------------LYQQNGVKFV--KGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFER 295 (469)
Q Consensus 239 ---------------------~l~~~gV~~~--~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~ 295 (469)
.+.+.+|+++ .+..|++++.+ +|.++| +++++|.||+|||+++++.++..
T Consensus 326 l~P~~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~~------gv~~~d-~~~~~D~ii~atG~~~~~~~~~~ 398 (542)
T 1w4x_A 326 LVPKGYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPR------GVRTSE-REYELDSLVLATGFDALTGALFK 398 (542)
T ss_dssp HSCCSSCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECSS------EEEESS-CEEECSEEEECCCCCCTTHHHHT
T ss_pred cCCCCCCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEcCC------eEEeCC-eEEecCEEEEcCCccccccCcCc
Confidence 0011346665 35668888632 578889 89999999999999998888776
Q ss_pred cCCcccCCCEEeCCCCC----------C-CCCceEEe-ccccccCCccCCcccccchH-HHHHHHHHHHHHHHhc
Q 012165 296 VGLNSSVGGIQVDGQFR----------T-RMPGIFAI-GDVAAFPLKMYDRTARVEHV-DHARQSAQHCIKALLS 357 (469)
Q Consensus 296 ~gl~~~~g~i~Vd~~~~----------t-~~~~Vfa~-GD~a~~~~~~~~~~~~~~~~-~~A~~~a~~~a~~i~~ 357 (469)
.++... +++.+++.++ + ..||+|++ ||.+... ..++ ..+..|+++++++|..
T Consensus 399 ~~i~g~-~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~---------~~~~~~~~e~q~~~ia~~i~~ 463 (542)
T 1w4x_A 399 IDIRGV-GNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSA---------LSNMLVSIEQHVEWVTDHIAY 463 (542)
T ss_dssp SEEECG-GGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGG---------GSCHHHHHHHHHHHHHHHHHH
T ss_pred eeeECC-CCCCHHHhhcCchheecccccCCCCceEEEcCCCCCcc---------cccHHHHHHHHHHHHHHHHHH
Confidence 554433 3455543221 1 56777776 7665311 2244 5688899999998864
No 93
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.79 E-value=9.5e-19 Score=154.29 Aligned_cols=134 Identities=24% Similarity=0.261 Sum_probs=112.5
Q ss_pred eEEEEcCChHHHHHHHHHHhCCCeEe--------------------------------eeHHHHHHcCcEEEcCCeEEEE
Q 012165 209 KVVVVGGGYIGMEVAAAAVGWKLDTT--------------------------------RYEQLYQQNGVKFVKGASIKNL 256 (469)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g~~v~--------------------------------~~~~~l~~~gV~~~~~~~v~~i 256 (469)
+++|||+|++|+++|..|+++|.+++ .+.+.+++.||+++.+ +++++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i 81 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVKGV 81 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEE
Confidence 68999999999999999999988876 1235567789999999 99999
Q ss_pred EeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCchhhhcCCcccCCCEEeCCCCCCCCCceEEeccccccCCccCCccc
Q 012165 257 EAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTA 336 (469)
Q Consensus 257 ~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~~~~~~ 336 (469)
+.++++ ..+.+++| ++++|.||+|+|.+|+ +++.+|++.++|.|.||+++||+.|+|||+|||+..+.+
T Consensus 82 ~~~~~~--~~v~~~~g-~i~ad~vI~A~G~~~~--~~~~~g~~~~~g~i~vd~~~~t~~~~i~a~GD~~~~~~~------ 150 (180)
T 2ywl_A 82 RDMGGV--FEVETEEG-VEKAERLLLCTHKDPT--LPSLLGLTRRGAYIDTDEGGRTSYPRVYAAGVARGKVPG------ 150 (180)
T ss_dssp EECSSS--EEEECSSC-EEEEEEEEECCTTCCH--HHHHHTCCEETTEECCCTTCBCSSTTEEECGGGGTCCSC------
T ss_pred EEcCCE--EEEEECCC-EEEECEEEECCCCCCC--ccccCCCCccCceEEeCCCCCcCCCCEEEeecccCcchh------
Confidence 865333 35788888 8999999999999984 567778877766788999999999999999999986531
Q ss_pred ccchHHHHHHHHHHHHHHHhc
Q 012165 337 RVEHVDHARQSAQHCIKALLS 357 (469)
Q Consensus 337 ~~~~~~~A~~~a~~~a~~i~~ 357 (469)
.+..|..+|+.+|.+|.+
T Consensus 151 ---~~~~A~~~g~~aa~~i~~ 168 (180)
T 2ywl_A 151 ---HAIISAGDGAYVAVHLVS 168 (180)
T ss_dssp ---CHHHHHHHHHHHHHHHHH
T ss_pred ---hHHHHHHhHHHHHHHHHH
Confidence 456789999999999975
No 94
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.77 E-value=1.7e-17 Score=169.69 Aligned_cols=273 Identities=17% Similarity=0.224 Sum_probs=151.0
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCC-----------CCcEEEEcCCCCCCCCCCCCccc------ccCC---CCCCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMA-----------DGRLCIVSKEAYAPYERPALTKG------YLFP---LDKKP 108 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~-----------~~~V~vie~~~~~~~~~~~l~~~------~~~~---~~~~~ 108 (469)
...+||||||+||+||++|..|.+.+.+ ....+.+|+.+.+.|+.-.+..+ ++.. .....
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~ 116 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPR 116 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTT
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCC
Confidence 3458999999999999999999886532 23567888887766542111100 0000 00000
Q ss_pred CCCCCCcc-----------ccCCCC------CCCCHhHH-HHCCcEEEeCCcEEEEeCCC----------cEEEeCCC--
Q 012165 109 ARLPGFHT-----------CVGSGG------ERQTPEWY-KEKGIEMIYQDPVTSIDIEK----------QTLITNSG-- 158 (469)
Q Consensus 109 ~~~~~~~~-----------~~~~~~------~~~~~~~~-~~~~i~~~~~~~v~~id~~~----------~~v~~~~g-- 158 (469)
..+ .|.. ...... ...+.+|+ ++.+..++++++|+++.+.. .+|++.++
T Consensus 117 s~~-sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~ 195 (501)
T 4b63_A 117 SSF-TFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVET 195 (501)
T ss_dssp CTT-SHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTT
T ss_pred Ccc-chHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCC
Confidence 000 0000 000000 00111222 34466688899999986432 35666443
Q ss_pred ---eEEEeccEEeccCCCCCcCCCCCCCCcCcEEEecCHHHH-HHHHHhhhcCCeEEEEcCChHHHHHHHHHHhC--CCe
Q 012165 159 ---KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADA-DALISSLEKAKKVVVVGGGYIGMEVAAAAVGW--KLD 232 (469)
Q Consensus 159 ---~~~~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~-~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~--g~~ 232 (469)
+++.+++||+|||..|. +|...+. .+.+++.....+. +.+......+|+|+|||+|.+|+|++..|++. +.+
T Consensus 196 g~~~~~~ar~vVlatG~~P~-iP~~~~~-~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ei~~~L~~~~~~~~ 273 (501)
T 4b63_A 196 GEISARRTRKVVIAIGGTAK-MPSGLPQ-DPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAEIFHDLQKRYPNSR 273 (501)
T ss_dssp CCEEEEEEEEEEECCCCEEC-CCTTSCC-CTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHHHHHHHHHHSTTCE
T ss_pred ceEEEEEeCEEEECcCCCCC-CCCCCCC-CcceeeccccccchhhccccccCCcEEEEECCcHHHHHHHHHHHhcCCCce
Confidence 36899999999998876 4543332 2345544333222 22222234789999999999999999999764 455
Q ss_pred Ee-------------------------------------------------------ee----HHHHH---------HcC
Q 012165 233 TT-------------------------------------------------------RY----EQLYQ---------QNG 244 (469)
Q Consensus 233 v~-------------------------------------------------------~~----~~~l~---------~~g 244 (469)
++ .+ ...++ ...
T Consensus 274 v~~~~R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~~~~~~~~~~ 353 (501)
T 4b63_A 274 TTLIMRDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMYLQRVKNPDETQWQ 353 (501)
T ss_dssp EEEECSSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCSCGGGCS
T ss_pred EEEEeCCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhccCCCcccccc
Confidence 54 00 00000 012
Q ss_pred cEEEcCCeEEEEEeCCC-CcE-----------EEEEcCCCCEEeCCEEEEccCCccCCc-hh-hhc-CCcc-cCCCEEeC
Q 012165 245 VKFVKGASIKNLEAGSD-GRV-----------AAVKLEDGSTIDADTIVIGIGAKPTVS-PF-ERV-GLNS-SVGGIQVD 308 (469)
Q Consensus 245 V~~~~~~~v~~i~~~~~-~~v-----------~~v~~~~g~~i~~D~vi~a~G~~p~~~-~~-~~~-gl~~-~~g~i~Vd 308 (469)
..+..+..+..+..... +++ .++.+.+|+++++|.||+|||++++.. +| ..+ .+.. +.|...|+
T Consensus 354 ~~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~~~~~l~~d~~g~~~v~ 433 (501)
T 4b63_A 354 HRILPERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLLSKVQHLRPTGQDQWKPH 433 (501)
T ss_dssp SEEECSEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHTGGGGGGSSTTCCSCCBC
T ss_pred eeecCCcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhcchhhhcCcCcCCCeeeC
Confidence 24555555555553221 221 134567889999999999999998853 22 211 1222 24667777
Q ss_pred CCCCC--------CCCceEEeccc
Q 012165 309 GQFRT--------RMPGIFAIGDV 324 (469)
Q Consensus 309 ~~~~t--------~~~~Vfa~GD~ 324 (469)
.+++. ..++||+-|-+
T Consensus 434 rdy~~~~~~~~~~~~~~i~~qg~~ 457 (501)
T 4b63_A 434 RDYRVEMDPSKVSSEAGIWLQGCN 457 (501)
T ss_dssp TTSBBCCCTTTBCTTCEEEECSCC
T ss_pred CCcEEeecCCccCCCceEEecCCC
Confidence 65542 24679999843
No 95
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.62 E-value=2e-19 Score=174.26 Aligned_cols=294 Identities=11% Similarity=0.014 Sum_probs=153.9
Q ss_pred cccccccccccccccCCCCcccccccCCccccccccccccc--ccCCCCCCcEEEEcCcHHHHHHHHHHHHc--CCCCCc
Q 012165 4 VSNSLSFKHGLSLWCPQSPSLHRIRHSSAKNFQRRGFVVAY--SSFANENREFVIVGGGNAAGYAARTFVEH--GMADGR 79 (469)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~vvIIGgG~AGl~aA~~L~~~--g~~~~~ 79 (469)
.+||+...+...|...+..++.. .++....++|.+.... .......+||+|||||||||+||.+|+++ |+ +
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~DV~IIGaGPAGlsAA~~la~~r~G~---~ 92 (326)
T 3fpz_A 18 NSTPVTHCLSDIVKKEDWSDFKF--APIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDL---K 92 (326)
T ss_dssp GGSCCCCTTTTTCCSTTCTTCCC--CCCCHHHHHHHHHHHHHHHHHHTTEESEEEECCSHHHHHHHHHHHHHCTTS---C
T ss_pred hcCCchhhhhhhccccccccccc--CCccHHHHHHHHHHHHHhhhhhccCCCEEEECCCHHHHHHHHHHHHhCCCC---e
Confidence 46888888888887766654422 2233333333322211 11234568999999999999999999754 66 8
Q ss_pred EEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCe
Q 012165 80 LCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGK 159 (469)
Q Consensus 80 V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~ 159 (469)
|+|+|+++.++.. .+..... ++.. ........++++.++++..+...
T Consensus 93 V~viEk~~~~GG~-------~~~~~~~----~~~~------~l~~~~~~~~~e~Gv~~~~~~~~---------------- 139 (326)
T 3fpz_A 93 VCIIESSVAPGGG-------SWLGGQL----FSAM------VMRKPAHLFLQELEIPYEDEGDY---------------- 139 (326)
T ss_dssp EEEECSSSSCCTT-------TTCCSTT----CCCE------EEETTTHHHHHHTTCCCEECSSE----------------
T ss_pred EEEEECCCCCCce-------EEeCCcc----CCHH------HHHHHHHHHHHHcCCEEEECCcc----------------
Confidence 9999998765432 1111010 0000 00123456678888877654221
Q ss_pred EEEeccEEeccCCCCCcCCCCCCCCcC---cEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEeee
Q 012165 160 LLKYGSLIVATGCTASRFPEKIGGYLP---GVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTRY 236 (469)
Q Consensus 160 ~~~yd~lVlAtG~~~~~~~~~~g~~~~---~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~~~ 236 (469)
....+.++++++..++. +..+|.... ++..+.. . ......+++++++|+|.++++.|..+...+.+++..
T Consensus 140 ~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~---~---~~~~~~~~~v~viggg~~av~~a~~~~~~~~~v~i~ 212 (326)
T 3fpz_A 140 VVVKHAALFISTVLSKV-LQLPNVKLFNATCVEDLVT---R---PPTEKGEVTVAGVVTNWTLVTQAHGTQCAMDPNVIE 212 (326)
T ss_dssp EEESCHHHHHHHHHHHH-HTSTTEEEETTEEEEEEEE---E---SSCSSSSCEEEEEEEEEHHHHTCTTSSSCCCCEEEE
T ss_pred eecceeEEEEcchhhhc-cccccceeecccccceeec---c---CCcccCCCEEEEEccCceeeehhhhhhhccCcEEEE
Confidence 22334455666655443 233332211 1111110 0 112346789999999999999999888888777621
Q ss_pred HHHHHHcCcEEEcCCeEEEEEeC-CCCcEEEEEcCCCCEEeCCEEEEccCCccCCchhhhcCCcccCCCEEeCCCCCCCC
Q 012165 237 EQLYQQNGVKFVKGASIKNLEAG-SDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRM 315 (469)
Q Consensus 237 ~~~l~~~gV~~~~~~~v~~i~~~-~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~Vd~~~~t~~ 315 (469)
.........+.........++.. .++.. ........+.+|.++.+.|.+|... ....+.|++|..++|++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~-------~~~e~~iv~~~~~~t~v 283 (326)
T 3fpz_A 213 LAGYKNDGTRDLSQKHGVILSTTGHDGPF--GAFCAKRIVDIDQNQKLGGMKGLDM-------NHAEHDVVIHSGAYAGV 283 (326)
T ss_dssp ESCBCTTSSBCTTSCCCEEEECCCSCSSS--CSHHHHHHHHHCTTCCCCCCCCBCH-------HHHHHHHHHHCEECTTS
T ss_pred eecccccccccceeecceEEEEecceeeE--eecceeEEEecCceeeecceecccc-------cccCCeEEECCCeEECC
Confidence 11000011110000000001100 01000 0000011345566666666665321 22234677788899999
Q ss_pred CceEEeccccccCCcc--CCcccccchHHHHHHHHHHHHHHHh
Q 012165 316 PGIFAIGDVAAFPLKM--YDRTARVEHVDHARQSAQHCIKALL 356 (469)
Q Consensus 316 ~~Vfa~GD~a~~~~~~--~~~~~~~~~~~~A~~~a~~~a~~i~ 356 (469)
|+|||+||++...... .|. ....++..|+.||+.|+
T Consensus 284 pGv~aaGDaa~~v~g~~rmGp-----~~g~mi~SG~~AAe~I~ 321 (326)
T 3fpz_A 284 DNMYFAGMEVAELDGLNRMGP-----TFGAMALSGVHAAEQIL 321 (326)
T ss_dssp BTEEECTHHHHHHHTCCBCCS-----CCHHHHHHHHHHHHHHH
T ss_pred CCEEEEchHhccccCCCcCch-----HHHHHHHHHHHHHHHHH
Confidence 9999999998632111 111 12234556888887775
No 96
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.54 E-value=4.3e-16 Score=158.14 Aligned_cols=206 Identities=15% Similarity=0.107 Sum_probs=110.6
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCcEE---EeC-CCeEEEeccEEeccCCCCCcCCCCCCCCcCcEEEecCHHHHHHH----
Q 012165 129 WYKEKGIEMIYQDPVTSIDIEKQTL---ITN-SGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADAL---- 200 (469)
Q Consensus 129 ~~~~~~i~~~~~~~v~~id~~~~~v---~~~-~g~~~~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~---- 200 (469)
.+++.+++++.++.| .+..++..+ .+. ++.++.+|.||+|||+.+..++...+. ++ .+...+.-+.+.
T Consensus 128 ~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~~~~~~~~--~~-~tGdgi~~a~~aGa~~ 203 (472)
T 2e5v_A 128 LAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSYLYEYSSTQ--ST-NIGDGMAIAFKAGTIL 203 (472)
T ss_dssp HHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGGGSSSBSSC--TT-CSCHHHHHHHHTTCCE
T ss_pred HHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcccCccccCC--CC-CchHHHHHHHHcCCCE
Confidence 345679999999889 887655543 332 233578999999999987643321110 11 111000001000
Q ss_pred H--HhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe-------------------------eeHHHHHHcCcEEEcCCeE
Q 012165 201 I--SSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT-------------------------RYEQLYQQNGVKFVKGASI 253 (469)
Q Consensus 201 ~--~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~-------------------------~~~~~l~~~gV~~~~~~~v 253 (469)
. +..+....++++|+| +++++..+...|..+. .+.+.+++.|. ++++..
T Consensus 204 ~d~e~~q~~p~~~~~ggg--~~~~ae~~~~~G~~~v~~~g~rf~~~~~~~~el~~rd~v~~~i~~~~~~~~~-v~ld~~- 279 (472)
T 2e5v_A 204 ADMEFVQFHPTVTSLDGE--VFLLTETLRGEGAQIINENGERFLFNYDKRGELAPRDILSRAIYIEMLKGHK-VFIDLS- 279 (472)
T ss_dssp ECTTCEEEEEEEECGGGC--CEECCTHHHHTTCEEEETTCCCGGGGTCTTGGGSCHHHHHHHHHHHHHHTCC-EEEECT-
T ss_pred eCCcceEEEeEEEccCCC--ceeeehhhcCCceEEECCCCCCCCccCCcccCcCchhHHHHHHHHHHHhCCc-EEEecc-
Confidence 0 000111233445666 7777777777766554 11122223332 221110
Q ss_pred EEEEeCCCCcEEEEEcCCCCEEe-CCEEEEccCCccCCchhhhcCCc-ccCCCEEeCCCCCCCCCceEEeccccccCCcc
Q 012165 254 KNLEAGSDGRVAAVKLEDGSTID-ADTIVIGIGAKPTVSPFERVGLN-SSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKM 331 (469)
Q Consensus 254 ~~i~~~~~~~v~~v~~~~g~~i~-~D~vi~a~G~~p~~~~~~~~gl~-~~~g~i~Vd~~~~t~~~~Vfa~GD~a~~~~~~ 331 (469)
.+ +. +. +.++ .|.++++.|..|+ ++++-.... ...|+|.||+++||++|+|||+|||+......
T Consensus 280 -~~----~~------~~--~~~~~~~~~~~~~G~dp~-~~i~v~p~~~~~~GGI~vd~~~~t~ipgLyAaGd~a~~~~hg 345 (472)
T 2e5v_A 280 -KI----ED------FE--RKFPVVAKYLARHGHNYK-VKIPIFPAAHFVDGGIRVNIRGESNIVNLYAIGEVSDSGLHG 345 (472)
T ss_dssp -TC----TT------HH--HHCHHHHHHHHHTTCCTT-SCEECEEEEEEESCEEECCTTCBCSSBTEEECGGGEECSSST
T ss_pred -ch----HH------HH--HHhHHHHHHHHHhCcCcc-cceEeehhhceeCCCeEECCCCccccCCEEecchhcccccCC
Confidence 00 00 00 1233 4667888899998 654422111 23589999999999999999999998732110
Q ss_pred CCcccccchHHHHHHHHHHHHHHHhc
Q 012165 332 YDRTARVEHVDHARQSAQHCIKALLS 357 (469)
Q Consensus 332 ~~~~~~~~~~~~A~~~a~~~a~~i~~ 357 (469)
..+ ....+...+...|+.+++++.+
T Consensus 346 ~~r-l~~~sl~~~~v~G~~a~~~~a~ 370 (472)
T 2e5v_A 346 ANR-LASNSLLEGLVFGINLPRYVDS 370 (472)
T ss_dssp TSC-CTTHHHHHHHHHHHHGGGTTTS
T ss_pred CCC-CCcccHHHHHHHHHHHHHHHHh
Confidence 011 1122455667778877777754
No 97
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.46 E-value=3.1e-15 Score=148.55 Aligned_cols=122 Identities=19% Similarity=0.173 Sum_probs=73.2
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC-------CCCCCcc------cccCCCCCCCCC----C-
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY-------ERPALTK------GYLFPLDKKPAR----L- 111 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~-------~~~~l~~------~~~~~~~~~~~~----~- 111 (469)
+++||+|||||++|+++|..|+++|. +|+|+|+.+.... .+..+.. .++......... +
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~---~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~ 79 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGK---SVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYT 79 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSC
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCC---CEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCC
Confidence 35899999999999999999999987 7999999875310 0111110 011000000000 0
Q ss_pred ----------CCCcc-------c----cCCCCCCCCHhHHHHCCcEEEeCCcEEEEeCC----C--cEEEeCCCeEEEec
Q 012165 112 ----------PGFHT-------C----VGSGGERQTPEWYKEKGIEMIYQDPVTSIDIE----K--QTLITNSGKLLKYG 164 (469)
Q Consensus 112 ----------~~~~~-------~----~~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~----~--~~v~~~~g~~~~yd 164 (469)
.+... . ........+.+.+++.|++++.+++|+++..+ . ..|.+.++ ++.+|
T Consensus 80 ~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad 158 (401)
T 2gqf_A 80 NWDFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCK 158 (401)
T ss_dssp HHHHHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEES
T ss_pred HHHHHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECC
Confidence 00000 0 00000011233456679999999999998744 2 35666666 69999
Q ss_pred cEEeccCCCCC
Q 012165 165 SLIVATGCTAS 175 (469)
Q Consensus 165 ~lVlAtG~~~~ 175 (469)
+||+|||+.+.
T Consensus 159 ~VVlAtG~~s~ 169 (401)
T 2gqf_A 159 NLIVATGGLSM 169 (401)
T ss_dssp EEEECCCCSSC
T ss_pred EEEECCCCccC
Confidence 99999998863
No 98
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.42 E-value=2e-12 Score=118.40 Aligned_cols=137 Identities=18% Similarity=0.251 Sum_probs=98.7
Q ss_pred CeEEEEcCChHHHHHHHHHHhCCCeEeee------------------------------------------HHHHHHc-C
Q 012165 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTRY------------------------------------------EQLYQQN-G 244 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~v~~~------------------------------------------~~~l~~~-g 244 (469)
.+|+|||+|++|+++|..|+++|.+++.+ .+.+++. |
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~~g 83 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGLRP 83 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTCTT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcCCC
Confidence 47999999999999999999999887621 2445565 9
Q ss_pred cEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCC--------------------ch---hhhcCCccc
Q 012165 245 VKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV--------------------SP---FERVGLNSS 301 (469)
Q Consensus 245 V~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~--------------------~~---~~~~gl~~~ 301 (469)
++++ +++++++..+ ++.+..|.+.+|+++++|.||+|+|..++. .+ +++.++...
T Consensus 84 v~i~-~~~v~~i~~~-~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~~l~~~g~~~~ 161 (232)
T 2cul_A 84 LHLF-QATATGLLLE-GNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLEDLSRLGFRFV 161 (232)
T ss_dssp EEEE-ECCEEEEEEE-TTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHHHHHHHTTCCEE
T ss_pred cEEE-EeEEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhCHHHHhCCCeEE
Confidence 9999 5689999864 456667888899899999999999995432 22 234444433
Q ss_pred CCC----------------EEeCC------C-CCCCCCceEEeccccccCCccCCcccccchHHHHHHHHHHHHHHHhc
Q 012165 302 VGG----------------IQVDG------Q-FRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLS 357 (469)
Q Consensus 302 ~g~----------------i~Vd~------~-~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~ 357 (469)
++. ..... . .+|++|+|||+|||+ ... .+..+..+|+.+|.+|+.
T Consensus 162 ~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~g----------~~~~~~~~g~~~a~~i~~ 229 (232)
T 2cul_A 162 EREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-REG----------DYARMSEEGKRLAEHLLH 229 (232)
T ss_dssp EEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SCC----------CHHHHHHHHHHHHHHHHH
T ss_pred ccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-cCc----------cHHHHHHHHHHHHHHHHh
Confidence 111 00110 1 126899999999999 432 455688999999999974
No 99
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.28 E-value=5.9e-13 Score=135.89 Aligned_cols=170 Identities=15% Similarity=-0.033 Sum_probs=101.8
Q ss_pred cccccccccccccccc---CCCCcccccc-cCCccccccccccc------------------ccccCCCCCCcEEEEcCc
Q 012165 3 SVSNSLSFKHGLSLWC---PQSPSLHRIR-HSSAKNFQRRGFVV------------------AYSSFANENREFVIVGGG 60 (469)
Q Consensus 3 ~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~------------------~~~~~~~~~~~vvIIGgG 60 (469)
.++||||.+||++|++ .|...|.+.. .++.++.+.+.... .........+||+|||||
T Consensus 22 ~~~~~~~~~~~rvc~~~~~l~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG 101 (497)
T 2bry_A 22 FETFVQAQLCQDVLSSFQGLCRALGVESGGGLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAG 101 (497)
T ss_dssp HHHHHHCCSHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCS
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHhCCCCCCCcEeehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECcc
Confidence 3689999999999998 7888888755 22333222221111 111123457899999999
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC-CCccc---ccCCCCC--CCCCC--CCCccccCCCCCCCCHhHHHH
Q 012165 61 NAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP-ALTKG---YLFPLDK--KPARL--PGFHTCVGSGGERQTPEWYKE 132 (469)
Q Consensus 61 ~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~-~l~~~---~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~ 132 (469)
++|+++|..|++.|. +|+|||+.+..+..+. .+... .+..... ....+ ..+...........+.+.+++
T Consensus 102 ~aGl~aA~~La~~G~---~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 178 (497)
T 2bry_A 102 PCGLRAAVELALLGA---RVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALL 178 (497)
T ss_dssp HHHHHHHHHHHHTTC---EEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCC---eEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHh
Confidence 999999999999987 8999999876432110 00000 0000000 00000 000000000001122344556
Q ss_pred CCcEEEeCCcEEEEeCC-----CcEEEe--C-CC--eEEEeccEEeccCCCCC
Q 012165 133 KGIEMIYQDPVTSIDIE-----KQTLIT--N-SG--KLLKYGSLIVATGCTAS 175 (469)
Q Consensus 133 ~~i~~~~~~~v~~id~~-----~~~v~~--~-~g--~~~~yd~lVlAtG~~~~ 175 (469)
.+++++.+++|+++..+ ...|++ . +| .++.+|+||+|+|..+.
T Consensus 179 ~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 179 LGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp TTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCC
T ss_pred CCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcc
Confidence 79999999999999763 236666 3 56 46899999999998764
No 100
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.16 E-value=7e-11 Score=103.53 Aligned_cols=108 Identities=18% Similarity=0.193 Sum_probs=74.1
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCc-cccCCCCCCCCHhH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFH-TCVGSGGERQTPEW 129 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 129 (469)
++||+|||||++|+.+|..|++.|. +|+|+|+.+........+ ..++++. ............+.
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~g~---~v~lie~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~ 65 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARAGL---KVLVLDGGRSKVKGVSRV------------PNYPGLLDEPSGEELLRRLEAH 65 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC---CEEEEECSCCTTTTCSCC------------CCSTTCTTCCCHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC---cEEEEeCCCCcccCchhh------------hccCCCcCCCCHHHHHHHHHHH
Confidence 3689999999999999999999987 799999887432110000 1111110 00000011233455
Q ss_pred HHHCCcEEEeCCcEEEEeCCC--cEEEeCCCeEEEeccEEeccCCCCC
Q 012165 130 YKEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~--~~v~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
+++.+++++.+ +|++++.++ ..+++++| ++++|+||+|+|..|.
T Consensus 66 ~~~~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~ 111 (180)
T 2ywl_A 66 ARRYGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPT 111 (180)
T ss_dssp HHHTTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCH
T ss_pred HHHcCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCC
Confidence 67889999998 999997643 36777788 7999999999998873
No 101
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.13 E-value=2.7e-10 Score=107.52 Aligned_cols=112 Identities=16% Similarity=0.202 Sum_probs=71.2
Q ss_pred HHcCcEEEcCCeEEEEEeCCCCcEEEEEcC---------CC-----CEEeCCEEEEccCCccCCch-----hhhcC----
Q 012165 241 QQNGVKFVKGASIKNLEAGSDGRVAAVKLE---------DG-----STIDADTIVIGIGAKPTVSP-----FERVG---- 297 (469)
Q Consensus 241 ~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~---------~g-----~~i~~D~vi~a~G~~p~~~~-----~~~~g---- 297 (469)
++.||++++++.++++..+ ++.+.++.+. +| .++++|.||+|+|..++... +...+
T Consensus 131 ~~~gv~i~~~~~V~~i~~~-~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~~~~~~~~g~~~~ 209 (284)
T 1rp0_A 131 ARPNVKLFNAVAAEDLIVK-GNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDH 209 (284)
T ss_dssp TSTTEEEEETEEEEEEEEE-TTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHHHHHHHHTTSSSC
T ss_pred hcCCCEEEcCcEEEEEEec-CCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHHHHHhhhccCCCC
Confidence 3479999999999999854 4555556542 32 57999999999998876532 22222
Q ss_pred CcccCCCEEeCC-------CCCCCCCceEEeccccccCCccCCcccccchHHHHHHHHHHHHHHHhc
Q 012165 298 LNSSVGGIQVDG-------QFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLS 357 (469)
Q Consensus 298 l~~~~g~i~Vd~-------~~~t~~~~Vfa~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~~a~~i~~ 357 (469)
+... .++.+|. +.+++.|++|++||++... ++.......+..+..+|..+|.++..
T Consensus 210 v~~~-~g~~~~~~~~~~v~~~~~~~p~i~a~G~~~~~~---~g~~~~gp~~~~~~~sG~~~a~~i~~ 272 (284)
T 1rp0_A 210 VPGM-KALDMNTAEDAIVRLTREVVPGMIVTGMEVAEI---DGAPRMGPTFGAMMISGQKAGQLALK 272 (284)
T ss_dssp CCCC-EEECHHHHHHHHHHHCEEEETTEEECTHHHHHH---HTCEECCSCCHHHHHHHHHHHHHHHH
T ss_pred cCCc-CCchhhhhhHHHhhccccccCCEEEEeeehhhh---cCCCCcChHHHHHHHhHHHHHHHHHH
Confidence 1111 2333332 3456789999999987431 11111112355677888999888875
No 102
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.12 E-value=3.6e-11 Score=120.56 Aligned_cols=89 Identities=17% Similarity=0.275 Sum_probs=67.3
Q ss_pred eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccC--------CccCCchhhh--cCCcccCCC
Q 012165 235 RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIG--------AKPTVSPFER--VGLNSSVGG 304 (469)
Q Consensus 235 ~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G--------~~p~~~~~~~--~gl~~~~g~ 304 (469)
.++..+++.| ++++++.|++|+..++ .+ .|.+.+|+++.+|.||+|+| +.|+.+.... .+.......
T Consensus 209 l~~~~~~~~g-~i~~~~~V~~i~~~~~-~v-~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~~~~~~ 285 (431)
T 3k7m_X 209 LVDAMSQEIP-EIRLQTVVTGIDQSGD-VV-NVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEGHGGQG 285 (431)
T ss_dssp HHHHHHTTCS-CEESSCCEEEEECSSS-SE-EEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHCCCCCE
T ss_pred HHHHHHhhCC-ceEeCCEEEEEEEcCC-eE-EEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhCCCcce
Confidence 3455566677 9999999999986543 34 47888998899999999999 8888765322 211122346
Q ss_pred EEeCCCCCCCCCceEEeccccc
Q 012165 305 IQVDGQFRTRMPGIFAIGDVAA 326 (469)
Q Consensus 305 i~Vd~~~~t~~~~Vfa~GD~a~ 326 (469)
++|+..++|+.+++|+.||+..
T Consensus 286 ~kv~~~~~~~~~~i~~~~d~~~ 307 (431)
T 3k7m_X 286 LKILIHVRGAEAGIECVGDGIF 307 (431)
T ss_dssp EEEEEEEESCCTTEEEEBSSSS
T ss_pred EEEEEEECCCCcCceEcCCCCE
Confidence 8999999999999999999843
No 103
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.98 E-value=2.9e-12 Score=133.97 Aligned_cols=60 Identities=13% Similarity=0.262 Sum_probs=46.8
Q ss_pred HHHcCcEEEcCCeEEEEEeCCC-CcEEEEEcC---CCC--EEeCCEEEEccCCccCCchhhhcCCc
Q 012165 240 YQQNGVKFVKGASIKNLEAGSD-GRVAAVKLE---DGS--TIDADTIVIGIGAKPTVSPFERVGLN 299 (469)
Q Consensus 240 l~~~gV~~~~~~~v~~i~~~~~-~~v~~v~~~---~g~--~i~~D~vi~a~G~~p~~~~~~~~gl~ 299 (469)
+++.||++++++.|++|..+++ +++.+|++. +|+ ++.+|.||+|+|..++..+|..+|+.
T Consensus 270 ~~~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~sgiG 335 (623)
T 3pl8_A 270 APEERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFG 335 (623)
T ss_dssp EEEEEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHTTTSS
T ss_pred ccCCCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHhcCCC
Confidence 3445899999999999986533 367777775 354 68899999999999998887776653
No 104
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.92 E-value=1.9e-09 Score=98.57 Aligned_cols=117 Identities=15% Similarity=0.165 Sum_probs=71.2
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCC-CCCccccCC---CCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARL-PGFHTCVGS---GGERQ 125 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~ 125 (469)
+++||+|||||++|+++|..|++.|. +|+|||+...... .+ ... ...... ...+ ..+....+. .....
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~---~v~lie~~~~~~G-~~-~~~-~~~~~~--~~~~~~~~~d~~g~~~~~~~~~ 73 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGV---RVGLLTQSLDAVM-MP-FLP-PKPPFP--PGSLLERAYDPKDERVWAFHAR 73 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESCGGGTT-CC-SSC-CCSCCC--TTCHHHHHCCTTCCCHHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEecCCCcCC-cc-cCc-cccccc--hhhHHhhhccCCCCCHHHHHHH
Confidence 45899999999999999999999987 7999998732111 00 000 000000 0000 000000000 00011
Q ss_pred CHhHHHHC-CcEEEeCCcEEEEeCCCc---EEEeCCCeEEEeccEEeccCCCCC
Q 012165 126 TPEWYKEK-GIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 126 ~~~~~~~~-~i~~~~~~~v~~id~~~~---~v~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
..+.+++. +++++. ++|+++..++. .|.+.+|+++.+|+||+|||....
T Consensus 74 l~~~~~~~~gv~i~~-~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 74 AKYLLEGLRPLHLFQ-ATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLG 126 (232)
T ss_dssp HHHHHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSS
T ss_pred HHHHHHcCCCcEEEE-eEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 23445565 899885 69999876543 467788888999999999998654
No 105
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.91 E-value=3.2e-09 Score=108.47 Aligned_cols=52 Identities=23% Similarity=0.360 Sum_probs=44.7
Q ss_pred eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCc
Q 012165 235 RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 287 (469)
Q Consensus 235 ~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~ 287 (469)
.+.+.+++.|++|++++.|++|..+ ++++.+|+++||+++.+|.||++++..
T Consensus 226 aL~~~~~~~Gg~I~~~~~V~~I~~~-~~~~~gV~~~~g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 226 GMIKLFQDLGGEVVLNARVSHMETT-GNKIEAVHLEDGRRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTSCEEECSCEEECCC--
T ss_pred HHHHHHHHhCCceeeecceeEEEee-CCeEEEEEecCCcEEEcCEEEECCCHH
Confidence 5667788999999999999999864 678889999999999999999987754
No 106
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.90 E-value=2.2e-09 Score=106.73 Aligned_cols=125 Identities=21% Similarity=0.273 Sum_probs=72.9
Q ss_pred cCCCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC-------CCCCc------ccccCCCCCCC----
Q 012165 46 SFANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE-------RPALT------KGYLFPLDKKP---- 108 (469)
Q Consensus 46 ~~~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~-------~~~l~------~~~~~~~~~~~---- 108 (469)
+|++.++||+|||||+||+++|..|++.|. +|+|+|+.+..... +..+. ..++.......
T Consensus 22 ~M~~~~~dViIIGgG~AGl~aA~~La~~G~---~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l 98 (417)
T 3v76_A 22 SMVAEKQDVVIIGAGAAGMMCAIEAGKRGR---RVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSAL 98 (417)
T ss_dssp ------CCEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHH
T ss_pred cccCCCCCEEEECcCHHHHHHHHHHHHCCC---cEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHH
Confidence 345667899999999999999999999987 79999998754210 00000 00000000000
Q ss_pred --------------------CCCCCCccccC--CCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCc--EEEeCCCeEEEec
Q 012165 109 --------------------ARLPGFHTCVG--SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYG 164 (469)
Q Consensus 109 --------------------~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~yd 164 (469)
..-.+...... ......+.+.+++.|++++.+++|+++..++. .|.+.+| ++.+|
T Consensus 99 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad 177 (417)
T 3v76_A 99 ARYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAA 177 (417)
T ss_dssp HHSCHHHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEES
T ss_pred HhcCHHHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEee
Confidence 00000000000 00001122345567999999999999976544 5677777 79999
Q ss_pred cEEeccCCCC
Q 012165 165 SLIVATGCTA 174 (469)
Q Consensus 165 ~lVlAtG~~~ 174 (469)
+||+|||..+
T Consensus 178 ~VIlAtG~~S 187 (417)
T 3v76_A 178 SLVVASGGKS 187 (417)
T ss_dssp EEEECCCCSS
T ss_pred EEEECCCCcc
Confidence 9999999875
No 107
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.87 E-value=2.2e-09 Score=105.62 Aligned_cols=121 Identities=17% Similarity=0.184 Sum_probs=76.2
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCC---------------cccccCCCCCCCC-----
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPAL---------------TKGYLFPLDKKPA----- 109 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l---------------~~~~~~~~~~~~~----- 109 (469)
+++||+|||||++|+++|..|++.|. +|+|+|+.+........+ ...+.. ......
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~---~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~-~~~~~~~~~~~ 85 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGW---DVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQ-GSHTPPTYETW 85 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHT-TCBCCSCEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC---CEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHh-hCCCccceEEE
Confidence 45899999999999999999999987 799999987643210000 000000 000000
Q ss_pred -------CCC--CCc--cccCCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCC
Q 012165 110 -------RLP--GFH--TCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 110 -------~~~--~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
.++ +.. ..........+.+.+.+.|++++.+++|++++.++ .|++.+|+++.+|.||.|+|....
T Consensus 86 ~~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~v~~~~g~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 86 MHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVG-RLTLQTGEVLEADLIVGADGVGSK 161 (379)
T ss_dssp ETTEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTT-EEEETTSCEEECSEEEECCCTTCH
T ss_pred eCCceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCC-EEEECCCCEEEcCEEEECCCccHH
Confidence 000 000 00000000112234556799999999999998766 888989989999999999998753
No 108
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.86 E-value=4.9e-09 Score=108.29 Aligned_cols=157 Identities=13% Similarity=0.133 Sum_probs=88.0
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCC-CCCCCCCCcccccC---------CCCCC-----------C
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY-APYERPALTKGYLF---------PLDKK-----------P 108 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~-~~~~~~~l~~~~~~---------~~~~~-----------~ 108 (469)
..+||+|||||+||++||..|++.|. +|+|||+.+. .+...+..+.+... ..... .
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~---kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f 103 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQ---QTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQF 103 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCC---CEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccch
Confidence 45899999999999999999999987 7999998742 22111111110000 00000 0
Q ss_pred -----CCCCCCcc----ccCCCCCCCCHhHHHH-CCcEEEeCCcEEEEeCCCc---EEEeCCCeEEEeccEEeccCCCCC
Q 012165 109 -----ARLPGFHT----CVGSGGERQTPEWYKE-KGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 109 -----~~~~~~~~----~~~~~~~~~~~~~~~~-~~i~~~~~~~v~~id~~~~---~v~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
..-+.... ...........+.+++ .|++++ +++|+.+..++. .|.+.+|.++.+|.||+|||+.+.
T Consensus 104 ~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 104 RILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp EEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred hhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 00000000 0000000011233445 589985 469999975543 467788888999999999998865
Q ss_pred cCCCCCCCCcCcEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe
Q 012165 176 RFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT 234 (469)
Q Consensus 176 ~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~ 234 (469)
. +.+ +|.... .+.+ +| |.++++++..|.++|.+++
T Consensus 183 ~-~~i-----~G~~~~--------------~~gr---iG-g~~a~eLA~~L~~lG~~v~ 217 (651)
T 3ces_A 183 G-KIH-----IGLDNY--------------SGGR---AG-DPPSIPLSRRLRELPLRVG 217 (651)
T ss_dssp C-EEE-----CC-------------------------------CCHHHHHHHTTTCCEE
T ss_pred C-ccc-----cCcccC--------------CCCC---cc-chhhhHHHHHHHhcCCeEE
Confidence 3 222 222111 1222 46 7889999999999998876
No 109
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.80 E-value=9.4e-09 Score=105.23 Aligned_cols=124 Identities=17% Similarity=0.214 Sum_probs=75.9
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCC--------------CCC---CCCc--ccccCCCCCCCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP--------------YER---PALT--KGYLFPLDKKPA 109 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~--------------~~~---~~l~--~~~~~~~~~~~~ 109 (469)
...+||+|||||++|+++|..|++.|+ +|+|+|+.+... +.. ..+. ....+.......
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~---kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~ 181 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGF---NPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYS 181 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTC---CCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCC---eEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEE
Confidence 445899999999999999999999987 799999985320 000 0000 000000000000
Q ss_pred CCC--CC--------------c-ccc-------C----CCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCc---EEEeCCC
Q 012165 110 RLP--GF--------------H-TCV-------G----SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQ---TLITNSG 158 (469)
Q Consensus 110 ~~~--~~--------------~-~~~-------~----~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~---~v~~~~g 158 (469)
.+. .+ . ... + ......+.+.+++.|++++.+++|+++..++. .|++.+|
T Consensus 182 ~i~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G 261 (549)
T 3nlc_A 182 QVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNG 261 (549)
T ss_dssp CSCCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTS
T ss_pred EeccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCC
Confidence 000 00 0 000 0 00001122334667999999999999977653 4778899
Q ss_pred eEEEeccEEeccCCCCC
Q 012165 159 KLLKYGSLIVATGCTAS 175 (469)
Q Consensus 159 ~~~~yd~lVlAtG~~~~ 175 (469)
+++.+|+||+|+|..++
T Consensus 262 ~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 262 EEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp CEEECSCEEECCCTTCH
T ss_pred CEEECCEEEECCCCChh
Confidence 89999999999998763
No 110
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.78 E-value=8.1e-09 Score=103.90 Aligned_cols=124 Identities=19% Similarity=0.298 Sum_probs=74.3
Q ss_pred CCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC-------CCCCCcc-----ccc--CCCCCCCC----
Q 012165 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY-------ERPALTK-----GYL--FPLDKKPA---- 109 (469)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~-------~~~~l~~-----~~~--~~~~~~~~---- 109 (469)
..+++||+|||||+||+++|..|++.|. +|+|+|+.+.... .+..+.. .++ ........
T Consensus 23 ~~~~~dVvIIGgG~aGl~aA~~la~~G~---~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (447)
T 2i0z_A 23 NAMHYDVIVIGGGPSGLMAAIGAAEEGA---NVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAF 99 (447)
T ss_dssp --CCCSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHH
T ss_pred ccCCCCEEEECCcHHHHHHHHHHHHCCC---CEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHH
Confidence 3456899999999999999999999987 7999999865320 0000000 000 00000000
Q ss_pred -CC-----------CCCcc---ccC---------CCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCc---EEEeCCCeEEE
Q 012165 110 -RL-----------PGFHT---CVG---------SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQ---TLITNSGKLLK 162 (469)
Q Consensus 110 -~~-----------~~~~~---~~~---------~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~---~v~~~~g~~~~ 162 (469)
.+ .+... ..+ ......+.+.+++.|++++.+++|+++..++. .|++.+|+++.
T Consensus 100 ~~~~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~ 179 (447)
T 2i0z_A 100 SIFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLE 179 (447)
T ss_dssp HHSCHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEE
T ss_pred HhcCHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEE
Confidence 00 00000 000 00001122345667999999999999975443 47778887799
Q ss_pred eccEEeccCCCC
Q 012165 163 YGSLIVATGCTA 174 (469)
Q Consensus 163 yd~lVlAtG~~~ 174 (469)
+|.||+|||...
T Consensus 180 Ad~VVlAtGg~s 191 (447)
T 2i0z_A 180 TNHVVIAVGGKS 191 (447)
T ss_dssp CSCEEECCCCSS
T ss_pred CCEEEECCCCCc
Confidence 999999999876
No 111
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.73 E-value=3.5e-08 Score=95.11 Aligned_cols=119 Identities=17% Similarity=0.208 Sum_probs=69.2
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCC---------CcccccCCCC-------------CCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPA---------LTKGYLFPLD-------------KKP 108 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~---------l~~~~~~~~~-------------~~~ 108 (469)
++||+|||||++|+++|..|++.|. +|+|+|+.+........ ....++.... ...
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~---~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGH---QVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHV 78 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCC---cEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCe
Confidence 4799999999999999999999987 79999998643110000 0000000000 000
Q ss_pred CCC----------------CCCccccCCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCc--EEEeCCCeEEE-eccEEec
Q 012165 109 ARL----------------PGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLK-YGSLIVA 169 (469)
Q Consensus 109 ~~~----------------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~-yd~lVlA 169 (469)
..+ ................+.+. .+++++++++|++++.++. +|++.+|+.+. +|+||+|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~vV~a 157 (336)
T 1yvv_A 79 AEWTPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMR-GDMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIA 157 (336)
T ss_dssp EEECCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHH-TTCCEECSCCEEEEEECSSCEEEEETTSCEEEEESEEEEC
T ss_pred eeccccceeccCcccccCCCCCccEEcCccHHHHHHHHH-ccCcEEecCEEEEEEEeCCEEEEEeCCCcCccccCEEEEc
Confidence 000 00000000000011112222 3889999999999976543 67778887664 9999999
Q ss_pred cCCC
Q 012165 170 TGCT 173 (469)
Q Consensus 170 tG~~ 173 (469)
+|..
T Consensus 158 ~g~~ 161 (336)
T 1yvv_A 158 TPAP 161 (336)
T ss_dssp SCHH
T ss_pred CCHH
Confidence 9964
No 112
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.72 E-value=4.1e-08 Score=101.39 Aligned_cols=54 Identities=20% Similarity=0.400 Sum_probs=44.9
Q ss_pred eeHHHHHHc-CcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccC
Q 012165 235 RYEQLYQQN-GVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 289 (469)
Q Consensus 235 ~~~~~l~~~-gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 289 (469)
.+.+.+++. ||+++.+ +|++++.++++.+..|.+.+|+++.+|.||.|+|....
T Consensus 199 ~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 199 FLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGL 253 (550)
T ss_dssp HHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchh
Confidence 345566677 9999999 99999876567677888999988999999999998765
No 113
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.71 E-value=1.4e-08 Score=100.50 Aligned_cols=122 Identities=14% Similarity=0.194 Sum_probs=72.5
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCC--c-------------ccc------------cC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPAL--T-------------KGY------------LF 102 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l--~-------------~~~------------~~ 102 (469)
.++||+|||||++|+++|..|++.|+ +|+|+|+.+......... . ..+ +.
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~---~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 81 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGH---RVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVY 81 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCC---cEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEe
Confidence 35799999999999999999999987 799999986541110000 0 000 00
Q ss_pred CCCCCCCCCC--CC-----ccccC-CCCCCCCHhHHHHC-CcEEEeCCcEEEEeCCCc----EEEeCCCeEEEeccEEec
Q 012165 103 PLDKKPARLP--GF-----HTCVG-SGGERQTPEWYKEK-GIEMIYQDPVTSIDIEKQ----TLITNSGKLLKYGSLIVA 169 (469)
Q Consensus 103 ~~~~~~~~~~--~~-----~~~~~-~~~~~~~~~~~~~~-~i~~~~~~~v~~id~~~~----~v~~~~g~~~~yd~lVlA 169 (469)
........++ .. ..... ......+.+.+++. |++++.+++|++++.++. .|++.+|+++.+|.||.|
T Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~A 161 (399)
T 2x3n_A 82 HDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGA 161 (399)
T ss_dssp ETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEEC
T ss_pred CCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEEC
Confidence 0000000000 00 00000 00000111223344 899999999999976543 678888888999999999
Q ss_pred cCCCC
Q 012165 170 TGCTA 174 (469)
Q Consensus 170 tG~~~ 174 (469)
+|...
T Consensus 162 dG~~s 166 (399)
T 2x3n_A 162 DGIAS 166 (399)
T ss_dssp CCTTC
T ss_pred CCCCh
Confidence 99764
No 114
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.71 E-value=3.3e-08 Score=102.51 Aligned_cols=38 Identities=29% Similarity=0.427 Sum_probs=33.7
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~ 90 (469)
..+||+|||+|+||+++|..|++.|. +|+|+|+.+...
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~---~v~~~e~~~~~~ 162 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGA---KVILLEKEPIPG 162 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSC---CEEEECSSSSSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCC---cEEEEecCCCCC
Confidence 35799999999999999999999987 799999987543
No 115
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.70 E-value=3.5e-08 Score=96.22 Aligned_cols=47 Identities=19% Similarity=0.235 Sum_probs=37.7
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCC---cEEEeCCC--eEEEeccEEeccCCCC
Q 012165 128 EWYKEKGIEMIYQDPVTSIDIEK---QTLITNSG--KLLKYGSLIVATGCTA 174 (469)
Q Consensus 128 ~~~~~~~i~~~~~~~v~~id~~~---~~v~~~~g--~~~~yd~lVlAtG~~~ 174 (469)
+.+++.|++++.+++|+++..++ ..|.+.+| .++.+|+||+|+|...
T Consensus 158 ~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 158 GDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcch
Confidence 34567899999999999998753 35777777 4799999999999764
No 116
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.69 E-value=1.7e-08 Score=100.62 Aligned_cols=122 Identities=19% Similarity=0.238 Sum_probs=72.1
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC-CCccc---ccC-----------------------
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP-ALTKG---YLF----------------------- 102 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~-~l~~~---~~~----------------------- 102 (469)
+.+||+|||||++|+++|..|++.|+ +|+|+|+.+...+..- .+... .+.
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~---~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 80 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGF---KVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVR 80 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTC---CEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEE
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCC---CEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEe
Confidence 44799999999999999999999987 7999999864322110 00000 000
Q ss_pred CCCCCCCCCC-------CCccccC-CCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCc----EEEeCCCe--EEEeccEEe
Q 012165 103 PLDKKPARLP-------GFHTCVG-SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQ----TLITNSGK--LLKYGSLIV 168 (469)
Q Consensus 103 ~~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~----~v~~~~g~--~~~yd~lVl 168 (469)
........+. ....... ..+...+.+.+++.|++++.+++|++++.++. .+.+.+|+ ++.+|.||.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~ 160 (421)
T 3nix_A 81 GKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIID 160 (421)
T ss_dssp TTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEE
T ss_pred CCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEE
Confidence 0000000000 0000000 00000112334456999999999999976543 34557787 699999999
Q ss_pred ccCCCC
Q 012165 169 ATGCTA 174 (469)
Q Consensus 169 AtG~~~ 174 (469)
|+|...
T Consensus 161 A~G~~s 166 (421)
T 3nix_A 161 ASGYGR 166 (421)
T ss_dssp CCGGGC
T ss_pred CCCCch
Confidence 999764
No 117
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.69 E-value=2.7e-08 Score=102.99 Aligned_cols=123 Identities=18% Similarity=0.172 Sum_probs=71.4
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC---------------CCCcccccCCCCCCCCC-CC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER---------------PALTKGYLFPLDKKPAR-LP 112 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~---------------~~l~~~~~~~~~~~~~~-~~ 112 (469)
.+.+||+|||||++|+++|..|++.|+ +|+|||+.+...... ..+...+.......... +.
T Consensus 47 ~~~~DVvIVGaG~aGL~~A~~La~~G~---~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~ 123 (570)
T 3fmw_A 47 ALTTDVVVVGGGPVGLMLAGELRAGGV---GALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFA 123 (570)
T ss_dssp ----CEEEECCSHHHHHHHHHHHHTTC---CEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeC
Confidence 346899999999999999999999998 799999976542110 00000000000000000 00
Q ss_pred C-----Ccc-ccCCC--C---------CCCCHhHHHHCCcEEEeCCcEEEEeCCCc--EEEe--CCC-eEEEeccEEecc
Q 012165 113 G-----FHT-CVGSG--G---------ERQTPEWYKEKGIEMIYQDPVTSIDIEKQ--TLIT--NSG-KLLKYGSLIVAT 170 (469)
Q Consensus 113 ~-----~~~-~~~~~--~---------~~~~~~~~~~~~i~~~~~~~v~~id~~~~--~v~~--~~g-~~~~yd~lVlAt 170 (469)
+ +.. ..... . ...+.+.+++.|++++.+++|++++.+.. +|++ .+| +++.+|+||.|.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~AD 203 (570)
T 3fmw_A 124 GIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCD 203 (570)
T ss_dssp TBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECS
T ss_pred CcccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcC
Confidence 0 000 00000 0 00112334456999999999999976554 5555 677 689999999999
Q ss_pred CCCC
Q 012165 171 GCTA 174 (469)
Q Consensus 171 G~~~ 174 (469)
|...
T Consensus 204 G~~S 207 (570)
T 3fmw_A 204 GGRS 207 (570)
T ss_dssp CSSC
T ss_pred CCCc
Confidence 9764
No 118
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.68 E-value=7.9e-08 Score=95.10 Aligned_cols=123 Identities=11% Similarity=0.064 Sum_probs=73.3
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC-C--Cccc---cc--CCCC--CCCCCCCCCccc-
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP-A--LTKG---YL--FPLD--KKPARLPGFHTC- 117 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~-~--l~~~---~~--~~~~--~~~~~~~~~~~~- 117 (469)
++++||+|||||++|+++|..|++.|+ +|+|+|+.+.....+. . +... .+ .+.. ............
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~G~---~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 79 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDAGV---DVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVD 79 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCC---CEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEe
Confidence 456899999999999999999999987 7999999865311100 0 0000 00 0000 000000000000
Q ss_pred --cCC-------CC-C---CCCHhHHHH--CCcEEEeCCcEEEEeCCC--cEEEeCCCeEEEeccEEeccCCCC
Q 012165 118 --VGS-------GG-E---RQTPEWYKE--KGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTA 174 (469)
Q Consensus 118 --~~~-------~~-~---~~~~~~~~~--~~i~~~~~~~v~~id~~~--~~v~~~~g~~~~yd~lVlAtG~~~ 174 (469)
.+. .. . ....+.+.+ .+++++.+++|+++..+. .+|++.+|+++.+|.||.|+|...
T Consensus 80 ~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S 153 (397)
T 2vou_A 80 ALTGERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGAS 153 (397)
T ss_dssp TTTCCEEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTC
T ss_pred cCCCCccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcch
Confidence 000 00 0 001122222 378999999999997544 367788898899999999999764
No 119
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.67 E-value=4.9e-08 Score=101.25 Aligned_cols=123 Identities=22% Similarity=0.333 Sum_probs=73.4
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC--------------CCcc-------------ccc
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP--------------ALTK-------------GYL 101 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~--------------~l~~-------------~~~ 101 (469)
|+.+||+|||||+||+++|..|++.|+ +|+|+|+.+....... .+.. .+.
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~---~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~ 97 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGH---DVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFL 97 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCC---CEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEE
Confidence 456899999999999999999999987 7999999864332110 0000 000
Q ss_pred CCCCCCC--CCCCCC-------c--ccc-CCCCCCCCHhHHHHCCcEEEeCCcEEEEeCC-C--cEEEeC-CC--eEEEe
Q 012165 102 FPLDKKP--ARLPGF-------H--TCV-GSGGERQTPEWYKEKGIEMIYQDPVTSIDIE-K--QTLITN-SG--KLLKY 163 (469)
Q Consensus 102 ~~~~~~~--~~~~~~-------~--~~~-~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~-~--~~v~~~-~g--~~~~y 163 (469)
....... ..+... . ... ...+...+.+.+++.|++++.+++|+++..+ + ..|++. +| .++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~A 177 (591)
T 3i3l_A 98 WGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVES 177 (591)
T ss_dssp CSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEE
T ss_pred ecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEc
Confidence 0000000 000000 0 000 0000001123345689999999999999864 2 256665 66 57999
Q ss_pred ccEEeccCCCC
Q 012165 164 GSLIVATGCTA 174 (469)
Q Consensus 164 d~lVlAtG~~~ 174 (469)
|.||.|+|...
T Consensus 178 dlVV~AdG~~S 188 (591)
T 3i3l_A 178 DFVIDAGGSGG 188 (591)
T ss_dssp SEEEECCGGGC
T ss_pred CEEEECCCCcc
Confidence 99999999754
No 120
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.67 E-value=2.4e-08 Score=102.51 Aligned_cols=50 Identities=12% Similarity=0.139 Sum_probs=39.6
Q ss_pred eHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCc
Q 012165 236 YEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 287 (469)
Q Consensus 236 ~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~ 287 (469)
...+.+..|+++++++.|++|+.. ++.+ .|.+.+|+++.+|.||++++..
T Consensus 218 ~~~l~~~lg~~i~~~~~V~~i~~~-~~~v-~v~~~~g~~~~ad~VI~a~p~~ 267 (520)
T 1s3e_A 218 SERIMDLLGDRVKLERPVIYIDQT-RENV-LVETLNHEMYEAKYVISAIPPT 267 (520)
T ss_dssp HHHHHHHHGGGEESSCCEEEEECS-SSSE-EEEETTSCEEEESEEEECSCGG
T ss_pred HHHHHHHcCCcEEcCCeeEEEEEC-CCeE-EEEECCCeEEEeCEEEECCCHH
Confidence 344455568999999999999864 4445 3888899999999999999864
No 121
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.66 E-value=3.8e-08 Score=97.12 Aligned_cols=122 Identities=18% Similarity=0.208 Sum_probs=72.2
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCC---Cccccc-----CCCCCC-CCCCCCCccc--c
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPA---LTKGYL-----FPLDKK-PARLPGFHTC--V 118 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~---l~~~~~-----~~~~~~-~~~~~~~~~~--~ 118 (469)
+++||+|||||++|+++|..|++.|+ +|+|+|+.+..+..... ++...+ .+.... ...+.+.... .
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~---~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 79 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGL---KTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPS 79 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTT
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCC---CEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCC
Confidence 34799999999999999999999987 79999998754321110 000000 000000 0000000000 0
Q ss_pred CCC---------------------CCCCCHhHHHHCCcEEEeCCcEEEEeCCCcE---EEe---CCCeEEEeccEEeccC
Q 012165 119 GSG---------------------GERQTPEWYKEKGIEMIYQDPVTSIDIEKQT---LIT---NSGKLLKYGSLIVATG 171 (469)
Q Consensus 119 ~~~---------------------~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~---v~~---~~g~~~~yd~lVlAtG 171 (469)
+.. +...+.+.+.+.|++++.+++|+++..++.. |++ .++.++++|.||.|+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G 159 (397)
T 3cgv_A 80 EKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADG 159 (397)
T ss_dssp CSSCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCC
T ss_pred CCEEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCC
Confidence 000 0001122344579999999999999776553 444 3456899999999999
Q ss_pred CCC
Q 012165 172 CTA 174 (469)
Q Consensus 172 ~~~ 174 (469)
...
T Consensus 160 ~~s 162 (397)
T 3cgv_A 160 FES 162 (397)
T ss_dssp TTC
T ss_pred cch
Confidence 764
No 122
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.65 E-value=4.8e-08 Score=94.58 Aligned_cols=119 Identities=17% Similarity=0.236 Sum_probs=70.4
Q ss_pred CCcEEEEcCcHHHHHHHHHHHH---cCCCCCcEEEEcCCCCCCCC----CC----CC--c--ccccCCCCC---------
Q 012165 51 NREFVIVGGGNAAGYAARTFVE---HGMADGRLCIVSKEAYAPYE----RP----AL--T--KGYLFPLDK--------- 106 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~---~g~~~~~V~vie~~~~~~~~----~~----~l--~--~~~~~~~~~--------- 106 (469)
|+||+|||||++|+++|..|++ .|+ +|+|+|+++..... +. .. . ..++.....
T Consensus 1 m~dV~IIGaG~aGl~~A~~L~~~~~~G~---~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~ 77 (342)
T 3qj4_A 1 MAQVLIVGAGMTGSLCAALLRRQTSGPL---YLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFY 77 (342)
T ss_dssp CEEEEEECCSHHHHHHHHHHHSCC-CCE---EEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHH
T ss_pred CCcEEEECCcHHHHHHHHHHHhhccCCc---eEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHH
Confidence 3689999999999999999999 776 89999998643211 00 00 0 000000000
Q ss_pred -------CCCCCC----------CCccccCCCCCCCCH-hHHHHCCcEEEeCCcEEEEeCCCc--EEEeCCCeEEEeccE
Q 012165 107 -------KPARLP----------GFHTCVGSGGERQTP-EWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSL 166 (469)
Q Consensus 107 -------~~~~~~----------~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~yd~l 166 (469)
....+. ............... ...+..+++++++++|++|..++. +|++.+|+++.+|+|
T Consensus 78 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~v 157 (342)
T 3qj4_A 78 DELLAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLI 157 (342)
T ss_dssp HHHHHTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEE
T ss_pred HHHHhCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEE
Confidence 000000 000000011111111 223345899999999999987543 677788887899999
Q ss_pred EeccCC
Q 012165 167 IVATGC 172 (469)
Q Consensus 167 VlAtG~ 172 (469)
|+|+..
T Consensus 158 V~A~p~ 163 (342)
T 3qj4_A 158 VLTMPV 163 (342)
T ss_dssp EECSCH
T ss_pred EECCCH
Confidence 999974
No 123
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.65 E-value=1.6e-07 Score=92.80 Aligned_cols=124 Identities=14% Similarity=0.164 Sum_probs=72.0
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCC--C--c----ccccC-------------CCCCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPA--L--T----KGYLF-------------PLDKK 107 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~--l--~----~~~~~-------------~~~~~ 107 (469)
++++||+|||||++|+++|..|++.|+ +|+|+|+.+........ + . ...+. +....
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~---~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~ 100 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGI---DVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVN 100 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTC---EEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEE
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCC---CEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceE
Confidence 456899999999999999999999987 89999998654221000 0 0 00000 00000
Q ss_pred CCCCCCCcccc-------CCCCCC----CCHhHHHHC--CcEEEeCCcEEEEeCCCc--EEEeCCCeEEEeccEEeccCC
Q 012165 108 PARLPGFHTCV-------GSGGER----QTPEWYKEK--GIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGC 172 (469)
Q Consensus 108 ~~~~~~~~~~~-------~~~~~~----~~~~~~~~~--~i~~~~~~~v~~id~~~~--~v~~~~g~~~~yd~lVlAtG~ 172 (469)
.....+..... ...... .+.+.+.+. +++++++++|++++.+.. +|++.+|+++.+|.||.|+|.
T Consensus 101 ~~~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~ 180 (398)
T 2xdo_A 101 IADEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGG 180 (398)
T ss_dssp EECSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCT
T ss_pred EECCCCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCc
Confidence 00000000000 000000 011122221 357888999999976543 678888988999999999997
Q ss_pred CCC
Q 012165 173 TAS 175 (469)
Q Consensus 173 ~~~ 175 (469)
...
T Consensus 181 ~S~ 183 (398)
T 2xdo_A 181 MSK 183 (398)
T ss_dssp TCS
T ss_pred chh
Confidence 653
No 124
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.63 E-value=2.4e-08 Score=102.82 Aligned_cols=157 Identities=15% Similarity=0.116 Sum_probs=91.1
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC-CCCCCCCCCccccc-----------CCCC------C--CC-
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA-YAPYERPALTKGYL-----------FPLD------K--KP- 108 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~-~~~~~~~~l~~~~~-----------~~~~------~--~~- 108 (469)
..+||+|||||+||++||..|++.|. +|+|||+.+ ..+...+..+.+.. .+.. . ..
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~---kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f 102 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGA---KTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQF 102 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC---CEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccce
Confidence 45899999999999999999999987 799999874 22211110010000 0000 0 00
Q ss_pred -----CCCCCCccc---c-CCCCCCCCHhHHHH-CCcEEEeCCcEEEEeCCCc---EEEeCCCeEEEeccEEeccCCCCC
Q 012165 109 -----ARLPGFHTC---V-GSGGERQTPEWYKE-KGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 109 -----~~~~~~~~~---~-~~~~~~~~~~~~~~-~~i~~~~~~~v~~id~~~~---~v~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
..-+..... . .........+.+++ .|++++ +++|+.+..++. .|.+.+|.++.+|.||+|||..+.
T Consensus 103 ~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~ 181 (637)
T 2zxi_A 103 KMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLN 181 (637)
T ss_dssp EEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBT
T ss_pred eecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCcc
Confidence 000000000 0 00000111233445 589985 469999876544 377888988999999999998865
Q ss_pred cCCCCCCCCcCcEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe
Q 012165 176 RFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT 234 (469)
Q Consensus 176 ~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~ 234 (469)
. +..+| .... .+.+ .|+.++++++..|.++|.++.
T Consensus 182 ~-~~~~G-----~~~~--------------~~Gr----~G~~~A~~la~~L~~lG~~v~ 216 (637)
T 2zxi_A 182 G-VIYIG-----DKMI--------------PGGR----LGEPRSEGLSDFYRRFDFPLI 216 (637)
T ss_dssp C-EEEET-----TEEE--------------ECSB----TTBCCBCTHHHHHHHTTCCCE
T ss_pred C-ceecc-----ceec--------------CCCC----CCchhHHHHHHHHHhcCCceE
Confidence 3 32222 2211 1122 235678899999999988765
No 125
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.59 E-value=9.5e-08 Score=101.22 Aligned_cols=47 Identities=15% Similarity=0.263 Sum_probs=37.7
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCc--EEEeCCCeEEEeccEEeccCCCCC
Q 012165 129 WYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 129 ~~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
.+++.|++++.+++|+++..++. .|.+.+|.++.+|+||+|||....
T Consensus 426 ~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 426 LAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQIS 474 (676)
T ss_dssp HHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGG
T ss_pred HHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchh
Confidence 34567999999999999976554 456667778999999999997643
No 126
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.58 E-value=8.6e-08 Score=98.73 Aligned_cols=38 Identities=18% Similarity=0.343 Sum_probs=34.0
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~ 89 (469)
...+||+|||||++|+++|..|+++|. +|+|||+.+..
T Consensus 3 ~~~~dVlIVGaG~aGl~~A~~La~~G~---~v~viEr~~~~ 40 (535)
T 3ihg_A 3 DHEVDVLVVGAGLGGLSTAMFLARQGV---RVLVVERRPGL 40 (535)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHTTTC---CEEEECSSSSC
T ss_pred CccCcEEEECcCHHHHHHHHHHHHCCC---CEEEEeCCCCC
Confidence 456899999999999999999999987 79999998754
No 127
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.58 E-value=7.3e-08 Score=94.65 Aligned_cols=38 Identities=16% Similarity=0.253 Sum_probs=33.7
Q ss_pred CCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 012165 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (469)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (469)
...++||+|||||++|+++|..|++.|. +|+|+|+...
T Consensus 14 ~~~~~dvvIIGgG~~Gl~~A~~La~~G~---~V~llE~~~~ 51 (382)
T 1ryi_A 14 MKRHYEAVVIGGGIIGSAIAYYLAKENK---NTALFESGTM 51 (382)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSST
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHhCCC---cEEEEeCCCC
Confidence 3456899999999999999999999987 7999999753
No 128
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.57 E-value=4.5e-08 Score=96.34 Aligned_cols=122 Identities=19% Similarity=0.301 Sum_probs=70.5
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC---CCccccc----CCCCC--CCCCCCCCccc---
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP---ALTKGYL----FPLDK--KPARLPGFHTC--- 117 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~---~l~~~~~----~~~~~--~~~~~~~~~~~--- 117 (469)
++|||+||||||||+++|..|+++|+ +|+|+|+.+..+.... .++...+ ..... ....+.+....
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~---~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 79 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGL---KTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPS 79 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC---cEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCC
Confidence 45899999999999999999999998 7999999775432211 0110000 00000 00000000000
Q ss_pred -----------cCCCC---------CCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEE----eCCC--eEEEeccEEeccC
Q 012165 118 -----------VGSGG---------ERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLI----TNSG--KLLKYGSLIVATG 171 (469)
Q Consensus 118 -----------~~~~~---------~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~----~~~g--~~~~yd~lVlAtG 171 (469)
..... ...+.+...+.|++++.+++|+.+..++..+. ..++ .++++|.||.|.|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG 159 (397)
T 3oz2_A 80 EKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADG 159 (397)
T ss_dssp CSSCEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCC
T ss_pred CceEeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCc
Confidence 00000 00011233567999999999998876655332 1233 3589999999999
Q ss_pred CCC
Q 012165 172 CTA 174 (469)
Q Consensus 172 ~~~ 174 (469)
...
T Consensus 160 ~~S 162 (397)
T 3oz2_A 160 FES 162 (397)
T ss_dssp TTC
T ss_pred ccc
Confidence 764
No 129
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.57 E-value=1.4e-06 Score=92.49 Aligned_cols=53 Identities=15% Similarity=0.198 Sum_probs=42.2
Q ss_pred eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCC-EEeCCEEEEccCCccC
Q 012165 235 RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS-TIDADTIVIGIGAKPT 289 (469)
Q Consensus 235 ~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~-~i~~D~vi~a~G~~p~ 289 (469)
.+.+.+++.|++++++++|+++..++++ + .|.+.+|+ ++.+|.||+|+|....
T Consensus 417 aL~~~a~~~Gv~i~~~t~V~~l~~~~~~-v-~V~t~~G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 417 ALMMLAQQNGMTCHYQHELQRLKRIDSQ-W-QLTFGQSQAAKHHATVILATGHRLP 470 (689)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEEECSSS-E-EEEEC-CCCCEEESEEEECCGGGTT
T ss_pred HHHHHHHhCCCEEEeCCeEeEEEEeCCe-E-EEEeCCCcEEEECCEEEECCCcchh
Confidence 4556677889999999999999875444 4 67888887 8999999999998743
No 130
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.56 E-value=3.9e-08 Score=101.54 Aligned_cols=159 Identities=13% Similarity=0.160 Sum_probs=89.3
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCC-CCCCCCCCccccc-----------CCCC---------CC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY-APYERPALTKGYL-----------FPLD---------KK 107 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~-~~~~~~~l~~~~~-----------~~~~---------~~ 107 (469)
...+||+|||||+||++||..|++.|. +|+|+|+.+. .+...+..+.+.. .+.. ..
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~---kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~ 95 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGL---HCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQ 95 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEE
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCC---cEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCc
Confidence 446899999999999999999999987 7999998742 2211110010000 0000 00
Q ss_pred C-----CCCCCCccc---cC-CCCCCCCHhHHHH-CCcEEEeCCcEEEEeCCCcE---EEeCCCeEEEeccEEeccCCCC
Q 012165 108 P-----ARLPGFHTC---VG-SGGERQTPEWYKE-KGIEMIYQDPVTSIDIEKQT---LITNSGKLLKYGSLIVATGCTA 174 (469)
Q Consensus 108 ~-----~~~~~~~~~---~~-~~~~~~~~~~~~~-~~i~~~~~~~v~~id~~~~~---v~~~~g~~~~yd~lVlAtG~~~ 174 (469)
. ..-+..... .. ........+.+++ .|++++. ..|..+..++.. |.+.+|.++.+|.||+|||+.+
T Consensus 96 f~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~-~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 96 FRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQ-DTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFL 174 (641)
T ss_dssp EEEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCB
T ss_pred hhhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEe-eEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCC
Confidence 0 000000000 00 0000111233445 4899865 589888765443 6778888999999999999886
Q ss_pred CcCCCCCCCCcCcEEEecCHHHHHHHHHhhhcCCeEEEEcCChHHHHHHHHHHhCCCeEe
Q 012165 175 SRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTT 234 (469)
Q Consensus 175 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~ 234 (469)
.... .++ .... .+.+++ |+.++++++..|.+.|.++.
T Consensus 175 ~~~i-~~G-----~~~~--------------~~g~~v---G~~~a~~la~~L~~~G~kv~ 211 (641)
T 3cp8_A 175 NGLI-HIG-----MDHF--------------PGGRST---AEPPVEGLTESLASLGFSFG 211 (641)
T ss_dssp TCEE-EET-----TEEE--------------ECSSST---TSCCBCSHHHHHHHTTCCEE
T ss_pred Cccc-eee-----eeee--------------cccccc---CCchhhhhHHHHHhCCceEE
Confidence 5321 111 1111 011211 35677888888888887775
No 131
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.55 E-value=9.3e-08 Score=96.37 Aligned_cols=99 Identities=17% Similarity=0.282 Sum_probs=75.5
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||||++|+.+|..|++.|. +|+++++.+... |.... .+ .....+.
T Consensus 166 ~~~~vvIiGgG~~g~e~A~~l~~~g~---~V~lv~~~~~~l---~~~~~-----------~~-----------~~~l~~~ 217 (455)
T 2yqu_A 166 VPKRLIVVGGGVIGLELGVVWHRLGA---EVIVLEYMDRIL---PTMDL-----------EV-----------SRAAERV 217 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSC---TTSCH-----------HH-----------HHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC---EEEEEecCCccc---cccCH-----------HH-----------HHHHHHH
Confidence 35799999999999999999999986 799999876521 10000 00 1123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeCCCeEEEeccEEeccCCCCCc
Q 012165 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTASR 176 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~yd~lVlAtG~~~~~ 176 (469)
+++.|++++.+++|.+++.++. .+.+.+++++++|.||+|+|.+|..
T Consensus 218 l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 218 FKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp HHHHTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCC
Confidence 7788999999999999987654 4556688889999999999988763
No 132
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.55 E-value=6.2e-08 Score=95.20 Aligned_cols=46 Identities=30% Similarity=0.338 Sum_probs=36.7
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCCcE---EEeCCCeEEEeccEEeccCCCC
Q 012165 128 EWYKEKGIEMIYQDPVTSIDIEKQT---LITNSGKLLKYGSLIVATGCTA 174 (469)
Q Consensus 128 ~~~~~~~i~~~~~~~v~~id~~~~~---v~~~~g~~~~yd~lVlAtG~~~ 174 (469)
+.+++.|++++.+++|+++..++.. |++.+| ++.+|+||+|+|...
T Consensus 157 ~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 157 VKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhH
Confidence 4456789999999999999865542 667667 699999999999764
No 133
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.55 E-value=1.7e-07 Score=97.27 Aligned_cols=37 Identities=38% Similarity=0.553 Sum_probs=33.2
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHc------CCCCCcEEEEcCCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEH------GMADGRLCIVSKEAYA 89 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~------g~~~~~V~vie~~~~~ 89 (469)
+.+||+|||||+||+++|..|++. |. +|+|+|+.+..
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~---~V~vlEk~~~~ 76 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDL---RVCLVEKAAHI 76 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCC---CEEEECSSSST
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCC---cEEEEeCCCCC
Confidence 458999999999999999999998 76 79999998654
No 134
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.54 E-value=5.1e-08 Score=99.42 Aligned_cols=123 Identities=15% Similarity=0.188 Sum_probs=72.5
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC-C--------------CCCcccccCCCCCCCCCCCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE-R--------------PALTKGYLFPLDKKPARLPG 113 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~-~--------------~~l~~~~~~~~~~~~~~~~~ 113 (469)
.+++||+|||||++|+++|..|+++|+ +|+|+|+.+..... + ..+...+..........+.+
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~---~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~ 85 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGV---EVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGG 85 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETT
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccc
Confidence 456899999999999999999999998 79999998654211 0 00111000000000000000
Q ss_pred --Cccc-cCC-----------CCCCCCHhHHHHCCcEEEeCCcEEEEeCCCc--EEEeCCCe---EEEeccEEeccCCCC
Q 012165 114 --FHTC-VGS-----------GGERQTPEWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGK---LLKYGSLIVATGCTA 174 (469)
Q Consensus 114 --~~~~-~~~-----------~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~---~~~yd~lVlAtG~~~ 174 (469)
+... ... .....+.+.+.+.+++++.+++|+++..+.. ++++.++. ++++|+||.|.|.+.
T Consensus 86 ~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 86 LPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp EEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTC
T ss_pred eecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcch
Confidence 0000 000 0000112334567999999999999976554 45555553 799999999999764
No 135
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.54 E-value=6.5e-08 Score=96.00 Aligned_cols=125 Identities=11% Similarity=0.041 Sum_probs=70.3
Q ss_pred CCCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC---------------CCccc------------
Q 012165 47 FANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP---------------ALTKG------------ 99 (469)
Q Consensus 47 ~~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~---------------~l~~~------------ 99 (469)
..++++||+|||||++|+++|..|+++|+ +|+|+|+.+....... .+...
T Consensus 19 ~~~~~~dV~IVGaG~aGl~~A~~La~~G~---~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~ 95 (407)
T 3rp8_A 19 YFQGHMKAIVIGAGIGGLSAAVALKQSGI---DCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMA 95 (407)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEE
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhCCC---CEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceE
Confidence 34557899999999999999999999998 7999999875421100 00000
Q ss_pred ccCCC-CCCCCCCCCC--cccc-CCCCCC---CCHhHHHH--CCcEEEeCCcEEEEeCCCc--EEEeCCCeEEEeccEEe
Q 012165 100 YLFPL-DKKPARLPGF--HTCV-GSGGER---QTPEWYKE--KGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIV 168 (469)
Q Consensus 100 ~~~~~-~~~~~~~~~~--~~~~-~~~~~~---~~~~~~~~--~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~yd~lVl 168 (469)
+.... ......++.. .... ...... .+...+.+ ..++++.+++|++++.++. +|++.+|+++.+|.||.
T Consensus 96 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~ 175 (407)
T 3rp8_A 96 YRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGRDSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIA 175 (407)
T ss_dssp EEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCGGGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEE
T ss_pred EEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCcCEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEE
Confidence 00000 0000000000 0000 000000 01111111 1278889999999987654 56778999999999999
Q ss_pred ccCCCC
Q 012165 169 ATGCTA 174 (469)
Q Consensus 169 AtG~~~ 174 (469)
|+|...
T Consensus 176 AdG~~S 181 (407)
T 3rp8_A 176 ADGSHS 181 (407)
T ss_dssp CCCTTC
T ss_pred CCCcCh
Confidence 999764
No 136
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.53 E-value=1.4e-07 Score=96.55 Aligned_cols=124 Identities=17% Similarity=0.210 Sum_probs=72.6
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC-CC-c---cccc---------CCCCCCCC-----
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP-AL-T---KGYL---------FPLDKKPA----- 109 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~-~l-~---~~~~---------~~~~~~~~----- 109 (469)
+.++||+|||||++|+++|..|++.|+ +|+|+|+.+...+... .+ + ..++ ........
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~~G~---~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~ 81 (512)
T 3e1t_A 5 PEVFDLIVIGGGPGGSTLASFVAMRGH---RVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTF 81 (512)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHTTTC---CEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEE
T ss_pred CccCCEEEECcCHHHHHHHHHHHhCCC---CEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceE
Confidence 345899999999999999999999987 7999999874322110 00 0 0000 00000000
Q ss_pred CCCC--------Ccc--ccCCC---------CCCCCHhHHHHCCcEEEeCCcEEEEeCCCcE---EE--eCCCe--EEEe
Q 012165 110 RLPG--------FHT--CVGSG---------GERQTPEWYKEKGIEMIYQDPVTSIDIEKQT---LI--TNSGK--LLKY 163 (469)
Q Consensus 110 ~~~~--------~~~--~~~~~---------~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~---v~--~~~g~--~~~y 163 (469)
.+.. +.. ..... +...+.+.+.+.|++++.+++|+++..++.. |+ ..+|+ ++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~a 161 (512)
T 3e1t_A 82 RWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHA 161 (512)
T ss_dssp ECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEE
T ss_pred EecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEc
Confidence 0000 000 00000 0001123345679999999999999876653 33 34564 7999
Q ss_pred ccEEeccCCCCC
Q 012165 164 GSLIVATGCTAS 175 (469)
Q Consensus 164 d~lVlAtG~~~~ 175 (469)
|.||.|+|....
T Consensus 162 d~VI~AdG~~S~ 173 (512)
T 3e1t_A 162 RFIVDASGNRTR 173 (512)
T ss_dssp EEEEECCCTTCS
T ss_pred CEEEECCCcchH
Confidence 999999998653
No 137
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.52 E-value=1.7e-07 Score=93.83 Aligned_cols=49 Identities=18% Similarity=0.371 Sum_probs=39.2
Q ss_pred HHHHCCcEEEeCC---cEEEEeCCCc--E-EEeCCCeEEEeccEEeccCCCCCcC
Q 012165 129 WYKEKGIEMIYQD---PVTSIDIEKQ--T-LITNSGKLLKYGSLIVATGCTASRF 177 (469)
Q Consensus 129 ~~~~~~i~~~~~~---~v~~id~~~~--~-v~~~~g~~~~yd~lVlAtG~~~~~~ 177 (469)
.+++.|++++.++ +|+++..++. + |++.+|+++.+|+||+|||.....+
T Consensus 170 ~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~~l 224 (438)
T 3dje_A 170 EAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAGQF 224 (438)
T ss_dssp HHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGGGT
T ss_pred HHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChhhh
Confidence 3456799999998 9999976554 3 7788888899999999999765433
No 138
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.52 E-value=2.2e-08 Score=102.02 Aligned_cols=129 Identities=16% Similarity=0.109 Sum_probs=88.9
Q ss_pred EeccEEeccCCCCCcCCCCCCCCcCcEEEecCHHHHHHH---------HHh--hhcCCeEEEEcCChHHHHHHHHHHhCC
Q 012165 162 KYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADAL---------ISS--LEKAKKVVVVGGGYIGMEVAAAAVGWK 230 (469)
Q Consensus 162 ~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~---------~~~--~~~~~~vvVvG~G~~g~e~A~~l~~~g 230 (469)
.||++++++|+++.. +++++..++++.......+...+ ... .....+|+|||||++|+.+|..|++.|
T Consensus 37 ~~~~l~~~~g~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~aGl~aA~~La~~G 115 (497)
T 2bry_A 37 SFQGLCRALGVESGG-GLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAGPCGLRAAVELALLG 115 (497)
T ss_dssp HHHHHHHHHTCCTTC-HHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCSHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCC-CcEeehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECccHHHHHHHHHHHHCC
Confidence 578999999999763 33333333444444444444333 111 123578999999999999999999999
Q ss_pred CeEe---------------------------------------------------eeHHHHHHcCcEEEcCCeEEEEEeC
Q 012165 231 LDTT---------------------------------------------------RYEQLYQQNGVKFVKGASIKNLEAG 259 (469)
Q Consensus 231 ~~v~---------------------------------------------------~~~~~l~~~gV~~~~~~~v~~i~~~ 259 (469)
.+|+ .+.+.+++.||++++++.+++++.+
T Consensus 116 ~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~ 195 (497)
T 2bry_A 116 ARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPP 195 (497)
T ss_dssp CEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECC
T ss_pred CeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEe
Confidence 8876 0123445679999999999999853
Q ss_pred C-CCcEEEEEc--C-CC--CEEeCCEEEEccCCccCCc
Q 012165 260 S-DGRVAAVKL--E-DG--STIDADTIVIGIGAKPTVS 291 (469)
Q Consensus 260 ~-~~~v~~v~~--~-~g--~~i~~D~vi~a~G~~p~~~ 291 (469)
+ ++....|.+ . +| +++.+|.||.|+|..+...
T Consensus 196 ~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r 233 (497)
T 2bry_A 196 PRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPE 233 (497)
T ss_dssp CSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCT
T ss_pred cCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcccc
Confidence 2 222234555 4 66 5799999999999988653
No 139
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.51 E-value=7.1e-08 Score=98.31 Aligned_cols=122 Identities=15% Similarity=0.204 Sum_probs=73.0
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC-C--------------CCCcccccCCCCCCC-CCCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE-R--------------PALTKGYLFPLDKKP-ARLP 112 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~-~--------------~~l~~~~~~~~~~~~-~~~~ 112 (469)
.+.+||+|||||++|+++|..|+++|+ +|+|+|+.+..... + ..+...+... .... ..+.
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~---~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~-~~~~~~~~~ 85 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGV---DVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPV-ETSTQGHFG 85 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSC-CEESEEEET
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhc-cccccceec
Confidence 356899999999999999999999998 79999998654211 0 0000000000 0000 0000
Q ss_pred CC--ccc-cCCC-----------CCCCCHhHHHHCCcEEEeCCcEEEEeCCCc--EEEeCCCe---EEEeccEEeccCCC
Q 012165 113 GF--HTC-VGSG-----------GERQTPEWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGK---LLKYGSLIVATGCT 173 (469)
Q Consensus 113 ~~--~~~-~~~~-----------~~~~~~~~~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~---~~~yd~lVlAtG~~ 173 (469)
+. ... .... ....+.+.+.+.+++++.+++|++++.+.. +|++.++. ++++|+||.|.|.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~ 165 (499)
T 2qa2_A 86 GRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGR 165 (499)
T ss_dssp TEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTT
T ss_pred ceecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcc
Confidence 00 000 0000 000112334567999999999999976543 56666664 79999999999986
Q ss_pred C
Q 012165 174 A 174 (469)
Q Consensus 174 ~ 174 (469)
.
T Consensus 166 S 166 (499)
T 2qa2_A 166 S 166 (499)
T ss_dssp C
T ss_pred c
Confidence 4
No 140
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.51 E-value=1.3e-08 Score=102.58 Aligned_cols=123 Identities=16% Similarity=0.235 Sum_probs=71.5
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC-CCCC---CcccccC--C-CCCCCC----CCCCCcccc
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY-ERPA---LTKGYLF--P-LDKKPA----RLPGFHTCV 118 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~-~~~~---l~~~~~~--~-~~~~~~----~~~~~~~~~ 118 (469)
+++||+|||||+||+++|..|++.|+ +|+|+|+.+.... ..+. ++...+. . ...... ...+.....
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~---~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 81 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGL---KILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYS 81 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSC---CEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEEC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCC---CEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEEC
Confidence 35899999999999999999999987 7999999865311 1100 0000000 0 000000 000000000
Q ss_pred CC-----------------CCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcE---EEeC---CCe--EEEeccEEeccCCC
Q 012165 119 GS-----------------GGERQTPEWYKEKGIEMIYQDPVTSIDIEKQT---LITN---SGK--LLKYGSLIVATGCT 173 (469)
Q Consensus 119 ~~-----------------~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~---v~~~---~g~--~~~yd~lVlAtG~~ 173 (469)
.. .+...+.+.+.+.|++++.+++|++++.++.. |++. +|+ ++.+|.||.|+|..
T Consensus 82 ~~~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~ 161 (453)
T 3atr_A 82 PDMQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYS 161 (453)
T ss_dssp TTSSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGG
T ss_pred CCCceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCc
Confidence 00 00001122334579999999999998776544 4443 665 79999999999976
Q ss_pred CC
Q 012165 174 AS 175 (469)
Q Consensus 174 ~~ 175 (469)
..
T Consensus 162 s~ 163 (453)
T 3atr_A 162 RS 163 (453)
T ss_dssp CT
T ss_pred hh
Confidence 43
No 141
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.48 E-value=1.3e-07 Score=93.52 Aligned_cols=46 Identities=20% Similarity=0.252 Sum_probs=36.6
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCCc---EEEeCCCeEEEeccEEeccCCCC
Q 012165 128 EWYKEKGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCTA 174 (469)
Q Consensus 128 ~~~~~~~i~~~~~~~v~~id~~~~---~v~~~~g~~~~yd~lVlAtG~~~ 174 (469)
+.+++.|++++.+++|+++..++. .|++.+| ++.+|+||+|+|...
T Consensus 182 ~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 182 RKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred HHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhH
Confidence 345677999999999999986543 4677777 699999999999754
No 142
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.45 E-value=2.6e-07 Score=91.10 Aligned_cols=122 Identities=17% Similarity=0.238 Sum_probs=72.0
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCC---CCCCCC-Cccc---cc----------------------
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA---PYERPA-LTKG---YL---------------------- 101 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~---~~~~~~-l~~~---~~---------------------- 101 (469)
++||+|||||++|+++|..|++.|+ +|+|+|+.+.. ...+.. +... .+
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~---~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~ 78 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGI---DNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIA 78 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTC---CEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEE
T ss_pred CccEEEECCCHHHHHHHHHHHHCCC---CEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEE
Confidence 4799999999999999999999987 79999987631 000000 0000 00
Q ss_pred CCCCCCCCCCC----CCccc-cC-CCCCCCCHhHHHHCCcEEEeCCcEEEEeCCC---cEEEe-CCCe--EEEeccEEec
Q 012165 102 FPLDKKPARLP----GFHTC-VG-SGGERQTPEWYKEKGIEMIYQDPVTSIDIEK---QTLIT-NSGK--LLKYGSLIVA 169 (469)
Q Consensus 102 ~~~~~~~~~~~----~~~~~-~~-~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~---~~v~~-~~g~--~~~yd~lVlA 169 (469)
.........++ +.... .. ......+.+.+.+.+++++.+++|+++..++ ..|++ .+|+ ++.+|.||.|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~A 158 (394)
T 1k0i_A 79 FAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGC 158 (394)
T ss_dssp ETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEEC
T ss_pred ECCceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEEC
Confidence 00000000000 00000 00 0000011223445699999999999997642 46776 6787 7999999999
Q ss_pred cCCCCC
Q 012165 170 TGCTAS 175 (469)
Q Consensus 170 tG~~~~ 175 (469)
+|....
T Consensus 159 dG~~S~ 164 (394)
T 1k0i_A 159 DGFHGI 164 (394)
T ss_dssp CCTTCS
T ss_pred CCCCcH
Confidence 997653
No 143
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.44 E-value=2.7e-07 Score=95.74 Aligned_cols=37 Identities=27% Similarity=0.437 Sum_probs=33.6
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~ 89 (469)
..+||||||||+||++||..|++.|. +|+|+|+.+..
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~---~V~vlEk~~~~ 161 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGA---KVILIEKEPVI 161 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCC---cEEEEeCCCCC
Confidence 46899999999999999999999987 79999998764
No 144
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.44 E-value=2e-07 Score=96.65 Aligned_cols=38 Identities=24% Similarity=0.417 Sum_probs=34.0
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~ 89 (469)
...+||||||||+||+++|..|++.|. +|+|||+.+..
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~G~---~V~vlEk~~~~ 156 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKAGA---NVILVDKAPFS 156 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHTC---CEEEECSSSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCC---cEEEEeCCCCC
Confidence 356799999999999999999999987 79999998754
No 145
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.43 E-value=3.5e-07 Score=90.72 Aligned_cols=97 Identities=19% Similarity=0.306 Sum_probs=75.5
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||||+.|+.+|..|++.|. +|+++++.+... + . .+ . ..+ .....+.
T Consensus 144 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l---~---~-~~---~---~~~-----------~~~l~~~ 196 (408)
T 2gqw_A 144 PQSRLLIVGGGVIGLELAATARTAGV---HVSLVETQPRLM---S---R-AA---P---ATL-----------ADFVARY 196 (408)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSSS---T---T-TS---C---HHH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCC---EEEEEEeCCccc---c---c-cc---C---HHH-----------HHHHHHH
Confidence 35799999999999999999999986 899999876421 0 0 00 0 000 0123466
Q ss_pred HHHCCcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCC
Q 012165 130 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
+++.|++++.++++.+++ ++ .|++.+|+++++|.||+|+|.+|.
T Consensus 197 l~~~GV~i~~~~~v~~i~-~~-~v~~~~g~~i~~D~vi~a~G~~p~ 240 (408)
T 2gqw_A 197 HAAQGVDLRFERSVTGSV-DG-VVLLDDGTRIAADMVVVGIGVLAN 240 (408)
T ss_dssp HHHTTCEEEESCCEEEEE-TT-EEEETTSCEEECSEEEECSCEEEC
T ss_pred HHHcCcEEEeCCEEEEEE-CC-EEEECCCCEEEcCEEEECcCCCcc
Confidence 788999999999999998 44 888999999999999999998875
No 146
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.42 E-value=4.4e-07 Score=88.66 Aligned_cols=46 Identities=28% Similarity=0.401 Sum_probs=36.1
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCc--EEEeCCCeEEEeccEEeccCCCCC
Q 012165 129 WYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 129 ~~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
.+++.|++++.+++|+++..++. .|++.+|+ +.+|+||+|+|....
T Consensus 158 ~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g~-~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 158 LAKEAGCAQLFNCPVTAIRHDDDGVTIETADGE-YQAKKAIVCAGTWVK 205 (372)
T ss_dssp HHHHTTCEEECSCCEEEEEECSSSEEEEESSCE-EEEEEEEECCGGGGG
T ss_pred HHHHCCCEEEcCCEEEEEEEcCCEEEEEECCCe-EEcCEEEEcCCccHH
Confidence 34567999999999999976543 56677775 999999999997643
No 147
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.41 E-value=2.8e-06 Score=84.57 Aligned_cols=51 Identities=16% Similarity=0.299 Sum_probs=41.3
Q ss_pred eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccC
Q 012165 235 RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 289 (469)
Q Consensus 235 ~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 289 (469)
.+.+.+++.|+++++++.|++|+.+ ++++ | ..+|+++.+|.||+++|....
T Consensus 194 ~l~~~~~~~G~~i~~~~~V~~i~~~-~~~v--V-~~~g~~~~ad~Vv~a~~~~~~ 244 (421)
T 3nrn_A 194 ELERIIMENKGKILTRKEVVEINIE-EKKV--Y-TRDNEEYSFDVAISNVGVRET 244 (421)
T ss_dssp HHHHHHHTTTCEEESSCCEEEEETT-TTEE--E-ETTCCEEECSEEEECSCHHHH
T ss_pred HHHHHHHHCCCEEEcCCeEEEEEEE-CCEE--E-EeCCcEEEeCEEEECCCHHHH
Confidence 4567788899999999999999853 4554 4 567889999999999997643
No 148
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.41 E-value=1.4e-06 Score=86.82 Aligned_cols=53 Identities=23% Similarity=0.397 Sum_probs=43.1
Q ss_pred eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccC
Q 012165 235 RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 289 (469)
Q Consensus 235 ~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 289 (469)
.+.+.+++.|+++++++.|++|..+ ++++.+|.++ |+++.+|.||+++|....
T Consensus 201 ~l~~~~~~~G~~i~~~~~V~~i~~~-~~~~~gv~~~-g~~~~ad~VV~a~~~~~~ 253 (425)
T 3ka7_A 201 ALETVISANGGKIHTGQEVSKILIE-NGKAAGIIAD-DRIHDADLVISNLGHAAT 253 (425)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEET-TEEEECSEEEECSCHHHH
T ss_pred HHHHHHHHcCCEEEECCceeEEEEE-CCEEEEEEEC-CEEEECCEEEECCCHHHH
Confidence 5567788899999999999999864 5666667764 778999999999997543
No 149
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.40 E-value=4.9e-07 Score=88.95 Aligned_cols=98 Identities=13% Similarity=0.179 Sum_probs=75.0
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (469)
.++++|||||+.|+.+|..|++.|. +|+++++.+.+.- . .+ ...+ .....+.+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~~~---~----~~------~~~~-----------~~~l~~~l 197 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGY---QLDVVAPCEQVMP---G----LL------HPAA-----------AKAVQAGL 197 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSSST---T----TS------CHHH-----------HHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC---eEEEEecCcchhh---c----cc------CHHH-----------HHHHHHHH
Confidence 5899999999999999999999986 8999998764210 0 00 0000 11234567
Q ss_pred HHCCcEEEeCCcEEEEeCCCc--EEEeCCCeEEEeccEEeccCCCCC
Q 012165 131 KEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 131 ~~~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
++.|++++.+++|.+++.++. .+++.+|+++++|.||+|+|.+|.
T Consensus 198 ~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~ 244 (384)
T 2v3a_A 198 EGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPR 244 (384)
T ss_dssp HTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEEC
T ss_pred HHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcC
Confidence 788999999999999976543 677888989999999999998875
No 150
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.40 E-value=4e-07 Score=91.52 Aligned_cols=60 Identities=25% Similarity=0.428 Sum_probs=45.0
Q ss_pred eHHHHHHcCcEEEcCCeEEEEEeC--------------CCCcEEEEEcCCCCEE--eCCEEEEccCCccCCchhhhcC
Q 012165 236 YEQLYQQNGVKFVKGASIKNLEAG--------------SDGRVAAVKLEDGSTI--DADTIVIGIGAKPTVSPFERVG 297 (469)
Q Consensus 236 ~~~~l~~~gV~~~~~~~v~~i~~~--------------~~~~v~~v~~~~g~~i--~~D~vi~a~G~~p~~~~~~~~g 297 (469)
+.+.+++.|++++.+++|++++.+ +++.+..|.+.+| ++ .+|.||+|+|.... .++..++
T Consensus 187 L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s~-~l~~~~g 262 (448)
T 3axb_A 187 YYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWSN-RLLNPLG 262 (448)
T ss_dssp HHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGHH-HHHGGGT
T ss_pred HHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCHH-HHHHHcC
Confidence 456677889999999999999861 3455667888888 68 99999999997643 3444433
No 151
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.39 E-value=4e-07 Score=91.92 Aligned_cols=99 Identities=21% Similarity=0.277 Sum_probs=76.0
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||||+.|+.+|..|++.|. +|+++++.+... +.+.. .+ .....+.
T Consensus 165 ~~~~vvVvGgG~~g~e~A~~l~~~G~---~Vtlv~~~~~~l---~~~~~-----------~~-----------~~~l~~~ 216 (463)
T 2r9z_A 165 QPKRVAIIGAGYIGIELAGLLRSFGS---EVTVVALEDRLL---FQFDP-----------LL-----------SATLAEN 216 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---TTSCH-----------HH-----------HHHHHHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHhcCC---EEEEEEcCCccc---cccCH-----------HH-----------HHHHHHH
Confidence 35799999999999999999999986 899999775421 00000 00 0123566
Q ss_pred HHHCCcEEEeCCcEEEEeCCC--cEEEeCCCe-EEEeccEEeccCCCCCc
Q 012165 130 YKEKGIEMIYQDPVTSIDIEK--QTLITNSGK-LLKYGSLIVATGCTASR 176 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~--~~v~~~~g~-~~~yd~lVlAtG~~~~~ 176 (469)
+++.|++++.+++|.+++.++ ..|++.+|+ ++++|.||+|+|.+|..
T Consensus 217 l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 217 MHAQGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNT 266 (463)
T ss_dssp HHHTTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEEESC
T ss_pred HHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcCC
Confidence 788999999999999998643 467888898 89999999999988763
No 152
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.39 E-value=4.3e-07 Score=88.92 Aligned_cols=45 Identities=11% Similarity=0.124 Sum_probs=35.5
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCc--EEEeCCCeEEEeccEEeccCCCC
Q 012165 129 WYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTA 174 (469)
Q Consensus 129 ~~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~yd~lVlAtG~~~ 174 (469)
.+++.|++++.+++|+++..++. .|++.+| ++.+|+||+|+|...
T Consensus 163 ~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 163 GIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhH
Confidence 34567999999999999876544 4666666 799999999999753
No 153
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.39 E-value=4.2e-07 Score=91.41 Aligned_cols=98 Identities=14% Similarity=0.120 Sum_probs=75.8
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||||+.|+.+|..|++.|. +|+++++.+... +.+.. .+ .....+.
T Consensus 166 ~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~~~-----------~~-----------~~~l~~~ 217 (450)
T 1ges_A 166 LPERVAVVGAGYIGVELGGVINGLGA---KTHLFEMFDAPL---PSFDP-----------MI-----------SETLVEV 217 (450)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---TTSCH-----------HH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHhcCC---EEEEEEeCCchh---hhhhH-----------HH-----------HHHHHHH
Confidence 35799999999999999999999986 899999875421 00000 00 1123566
Q ss_pred HHHCCcEEEeCCcEEEEeCCC---cEEEeCCCeEEEeccEEeccCCCCC
Q 012165 130 YKEKGIEMIYQDPVTSIDIEK---QTLITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~---~~v~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
+++.|++++.+++|.+++.++ ..|++.+|+++++|.||+|+|.+|.
T Consensus 218 l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~ 266 (450)
T 1ges_A 218 MNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPA 266 (450)
T ss_dssp HHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEES
T ss_pred HHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcC
Confidence 778899999999999998653 3788889988999999999998876
No 154
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.36 E-value=3.3e-07 Score=92.36 Aligned_cols=97 Identities=22% Similarity=0.305 Sum_probs=72.7
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||||++|+.+|..|++.|. +|+++++.+... |.+.. .+ .....+.
T Consensus 170 ~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~~~-----------~~-----------~~~l~~~ 221 (458)
T 1lvl_A 170 LPQHLVVVGGGYIGLELGIAYRKLGA---QVSVVEARERIL---PTYDS-----------EL-----------TAPVAES 221 (458)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTC---EEEEECSSSSSS---TTSCH-----------HH-----------HHHHHHH
T ss_pred cCCeEEEECcCHHHHHHHHHHHHCCC---eEEEEEcCCccc---cccCH-----------HH-----------HHHHHHH
Confidence 35799999999999999999999986 899999876431 10000 00 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCcEEEeC--CC--eEEEeccEEeccCCCCCc
Q 012165 130 YKEKGIEMIYQDPVTSIDIEKQTLITN--SG--KLLKYGSLIVATGCTASR 176 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~~~v~~~--~g--~~~~yd~lVlAtG~~~~~ 176 (469)
+++.|++++.+++|.+++. +. +.+. +| +++++|.||+|+|.+|..
T Consensus 222 l~~~gv~i~~~~~v~~i~~-~~-v~v~~~~G~~~~i~~D~vv~a~G~~p~~ 270 (458)
T 1lvl_A 222 LKKLGIALHLGHSVEGYEN-GC-LLANDGKGGQLRLEADRVLVAVGRRPRT 270 (458)
T ss_dssp HHHHTCEEETTCEEEEEET-TE-EEEECSSSCCCEECCSCEEECCCEEECC
T ss_pred HHHCCCEEEECCEEEEEEe-CC-EEEEECCCceEEEECCEEEECcCCCcCC
Confidence 7888999999999999987 43 4333 56 579999999999988763
No 155
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.35 E-value=4.7e-07 Score=88.48 Aligned_cols=92 Identities=22% Similarity=0.336 Sum_probs=72.9
Q ss_pred CcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHHH
Q 012165 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYK 131 (469)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (469)
++++|||||+.|+.+|..|++.|. +|+++++.+... + +.. .+ .....+.++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l---~-~~~-----------~~-----------~~~l~~~l~ 194 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGY---HVKLIHRGAMFL---G-LDE-----------EL-----------SNMIKDMLE 194 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTC---EEEEECSSSCCT---T-CCH-----------HH-----------HHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCCC---EEEEEeCCCeec---c-CCH-----------HH-----------HHHHHHHHH
Confidence 789999999999999999999986 899999876421 0 100 00 112456678
Q ss_pred HCCcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCC
Q 012165 132 EKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 132 ~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
+.|++++.++++.+++ ...|++++|+ +++|.+|+|+|.+|.
T Consensus 195 ~~gV~i~~~~~v~~i~--~~~v~~~~g~-i~~D~vi~a~G~~p~ 235 (367)
T 1xhc_A 195 ETGVKFFLNSELLEAN--EEGVLTNSGF-IEGKVKICAIGIVPN 235 (367)
T ss_dssp HTTEEEECSCCEEEEC--SSEEEETTEE-EECSCEEEECCEEEC
T ss_pred HCCCEEEcCCEEEEEE--eeEEEECCCE-EEcCEEEECcCCCcC
Confidence 8999999999999998 3468888888 999999999998875
No 156
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.34 E-value=5e-07 Score=91.22 Aligned_cols=97 Identities=12% Similarity=0.222 Sum_probs=73.2
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (469)
.++++|||||+.|+.+|..|++.|. +|+|+++.+... +.+. ..+ .....+.+
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~~-----------~~~-----------~~~l~~~l 220 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGA---EVTLIEYMPEIL---PQGD-----------PET-----------AALLRRAL 220 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---TTSC-----------HHH-----------HHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC---eEEEEEcCCccc---cccC-----------HHH-----------HHHHHHHH
Confidence 4799999999999999999999986 899999876421 0000 000 11234667
Q ss_pred HHCCcEEEeCCcEEEEeCCCc--EEEeC-C--Ce--EEEeccEEeccCCCCC
Q 012165 131 KEKGIEMIYQDPVTSIDIEKQ--TLITN-S--GK--LLKYGSLIVATGCTAS 175 (469)
Q Consensus 131 ~~~~i~~~~~~~v~~id~~~~--~v~~~-~--g~--~~~yd~lVlAtG~~~~ 175 (469)
++.|++++.+++|.+++.++. .+++. + |+ ++++|.||+|+|.+|.
T Consensus 221 ~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~ 272 (464)
T 2eq6_A 221 EKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPR 272 (464)
T ss_dssp HHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEES
T ss_pred HhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccC
Confidence 889999999999999986553 45554 5 66 7999999999998876
No 157
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.34 E-value=1e-06 Score=88.14 Aligned_cols=95 Identities=15% Similarity=0.274 Sum_probs=75.3
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (469)
.++++|||||+.|+.+|..+++.|. +|++++..+... ...+. .+ .....+.+
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~ll-----------~~~d~---~~-----------~~~~~~~l 198 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGL---HPTLIHRSDKIN-----------KLMDA---DM-----------NQPILDEL 198 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTC---EEEEEESSSCCS-----------TTSCG---GG-----------GHHHHHHH
T ss_pred CcEEEEECCccchhhhHHHHHhcCC---cceeeeeecccc-----------ccccc---hh-----------HHHHHHHh
Confidence 5689999999999999999999986 899999775421 00000 00 12345678
Q ss_pred HHCCcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCC
Q 012165 131 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 131 ~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
++.+|+++.+++|.+++. ..+++++|+++++|.+++|+|.+|.
T Consensus 199 ~~~gV~i~~~~~v~~~~~--~~v~~~~g~~~~~D~vl~a~G~~Pn 241 (437)
T 4eqs_A 199 DKREIPYRLNEEINAING--NEITFKSGKVEHYDMIIEGVGTHPN 241 (437)
T ss_dssp HHTTCCEEESCCEEEEET--TEEEETTSCEEECSEEEECCCEEES
T ss_pred hccceEEEeccEEEEecC--CeeeecCCeEEeeeeEEEEeceecC
Confidence 899999999999998874 5688999999999999999998875
No 158
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.34 E-value=8.8e-07 Score=88.07 Aligned_cols=98 Identities=14% Similarity=0.216 Sum_probs=75.9
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (469)
.++++|||+|+.|+.+|..|++.|. +|++++..+.+.-. .+ ...+ .....+.+
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~---~Vtvv~~~~~~l~~-------~~------~~~~-----------~~~l~~~l 204 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGV---NVTLLEALPRVLAR-------VA------GEAL-----------SEFYQAEH 204 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSTTTT-------TS------CHHH-----------HHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCC---eEEEEecCCchhhh-------hc------CHHH-----------HHHHHHHH
Confidence 6799999999999999999999986 89999987653100 00 0000 11234567
Q ss_pred HHCCcEEEeCCcEEEEeCCCc---EEEeCCCeEEEeccEEeccCCCCC
Q 012165 131 KEKGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 131 ~~~~i~~~~~~~v~~id~~~~---~v~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
++.|++++.++.|.++..++. .|.+.+|+++++|.+|+|+|..|.
T Consensus 205 ~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~ 252 (415)
T 3lxd_A 205 RAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPC 252 (415)
T ss_dssp HHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEES
T ss_pred HhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccC
Confidence 889999999999999987542 578899999999999999998875
No 159
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.33 E-value=8.2e-07 Score=89.20 Aligned_cols=98 Identities=18% Similarity=0.269 Sum_probs=73.5
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||||++|+.+|..|++.|. +|+++++.+...- . .+ . ..+ .....+.
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~---~Vtlv~~~~~~l~------~-~~---~---~~~-----------~~~l~~~ 200 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGK---KVTVIDILDRPLG------V-YL---D---KEF-----------TDVLTEE 200 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSTTT------T-TC---C---HHH-----------HHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC---eEEEEecCccccc------c-cC---C---HHH-----------HHHHHHH
Confidence 46899999999999999999999986 8999998764210 0 00 0 000 1123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeCCCeEEEeccEEeccCCCCC
Q 012165 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
+++.|++++.+++|.+++.+++ .+.+ ++.++++|.||+|+|.+|.
T Consensus 201 l~~~gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 201 MEANNITIATGETVERYEGDGRVQKVVT-DKNAYDADLVVVAVGVRPN 247 (447)
T ss_dssp HHTTTEEEEESCCEEEEECSSBCCEEEE-SSCEEECSEEEECSCEEES
T ss_pred HHhCCCEEEcCCEEEEEEccCcEEEEEE-CCCEEECCEEEECcCCCCC
Confidence 7788999999999999987643 3555 4567999999999998875
No 160
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.33 E-value=9.7e-07 Score=89.97 Aligned_cols=98 Identities=14% Similarity=0.196 Sum_probs=76.0
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (469)
.++++|||||+.|+.+|..|++.|. +|+++++.+... +.+.. .+ .....+.+
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~d~-----------~~-----------~~~l~~~l 227 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGI---DSYIFARGNRIL---RKFDE-----------SV-----------INVLENDM 227 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTC---EEEEECSSSSSC---TTSCH-----------HH-----------HHHHHHHH
T ss_pred CCeEEEECChHHHHHHHHHHHHcCC---eEEEEecCCccC---cccch-----------hh-----------HHHHHHHH
Confidence 6799999999999999999999886 899999875421 11100 00 11235667
Q ss_pred HHCCcEEEeCCcEEEEeCCC---cEEEeCCCeE-EEeccEEeccCCCCCc
Q 012165 131 KEKGIEMIYQDPVTSIDIEK---QTLITNSGKL-LKYGSLIVATGCTASR 176 (469)
Q Consensus 131 ~~~~i~~~~~~~v~~id~~~---~~v~~~~g~~-~~yd~lVlAtG~~~~~ 176 (469)
++.|+++++++++.+++.+. ..+.+.+|++ +++|.||+|+|.+|..
T Consensus 228 ~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 228 KKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp HHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTT
T ss_pred HhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCC
Confidence 88999999999999998643 3678888887 9999999999988763
No 161
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.33 E-value=4e-07 Score=89.46 Aligned_cols=37 Identities=16% Similarity=0.290 Sum_probs=32.9
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~ 89 (469)
+++||+|||||++|+++|..|+++|. +|+|+|+....
T Consensus 2 ~~~dvvIIGaG~~Gl~~A~~La~~G~---~V~vie~~~~~ 38 (389)
T 2gf3_A 2 THFDVIVVGAGSMGMAAGYQLAKQGV---KTLLVDAFDPP 38 (389)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSCSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCC---eEEEEeCCCCC
Confidence 35799999999999999999999987 79999987643
No 162
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.32 E-value=4.4e-07 Score=90.10 Aligned_cols=99 Identities=19% Similarity=0.263 Sum_probs=76.7
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||+|+.|+.+|..|++.|. +|++++..+.+. .. .+ + ..+ .....+.
T Consensus 142 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtvv~~~~~~l------~~-~~-~-----~~~-----------~~~l~~~ 194 (410)
T 3ef6_A 142 SATRLLIVGGGLIGCEVATTARKLGL---SVTILEAGDELL------VR-VL-G-----RRI-----------GAWLRGL 194 (410)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS------HH-HH-C-----HHH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCC---eEEEEecCCccc------hh-hc-C-----HHH-----------HHHHHHH
Confidence 35799999999999999999999886 899999876421 00 00 0 000 1123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeCCCeEEEeccEEeccCCCCC
Q 012165 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
+++.|++++++++|.+++.+++ .|++.+|+++++|.||+|+|.+|.
T Consensus 195 l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~ 242 (410)
T 3ef6_A 195 LTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAEPA 242 (410)
T ss_dssp HHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEEEC
T ss_pred HHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCeec
Confidence 7788999999999999987654 688999999999999999998875
No 163
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.31 E-value=4.8e-07 Score=83.70 Aligned_cols=37 Identities=22% Similarity=0.261 Sum_probs=33.4
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~ 89 (469)
|.+||+|||||||||+||..|+++|+ +|+|+|+.+.+
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G~---~V~v~Ek~~~~ 37 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAGH---QVHLFDKSRGS 37 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEECCCCC
Confidence 35799999999999999999999998 79999998765
No 164
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.30 E-value=3.9e-07 Score=90.50 Aligned_cols=37 Identities=16% Similarity=0.270 Sum_probs=32.9
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCc-EEEEcCCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGR-LCIVSKEAYA 89 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~-V~vie~~~~~ 89 (469)
..+||+|||||++|+++|..|++.|. + |+|+|+.+..
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~---~~v~v~E~~~~~ 40 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGI---GKVTLLESSSEI 40 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC---SEEEEEESSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCC---CeEEEEECCCCc
Confidence 45899999999999999999999987 8 9999998653
No 165
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.30 E-value=2.2e-06 Score=84.27 Aligned_cols=84 Identities=24% Similarity=0.437 Sum_probs=70.4
Q ss_pred cCCeEEEEcCChHHHHHHHHHHhCCCeEe------------------------------eeHHHHHHcCcEEEcCCeEEE
Q 012165 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTT------------------------------RYEQLYQQNGVKFVKGASIKN 255 (469)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~v~------------------------------~~~~~l~~~gV~~~~~~~v~~ 255 (469)
...+|+|||+|+.|+.+|..|...+.+++ ...+.+++.||++++++++++
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~ 87 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATS 87 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEE
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEE
Confidence 45689999999999999999977777776 356778889999999999999
Q ss_pred EEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCchh
Q 012165 256 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPF 293 (469)
Q Consensus 256 i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~ 293 (469)
++.. +. .|++++|+++.+|.+|+|||.+|....+
T Consensus 88 id~~-~~---~v~~~~g~~~~yd~lvlAtG~~p~~p~i 121 (385)
T 3klj_A 88 IDPN-NK---LVTLKSGEKIKYEKLIIASGSIANKIKV 121 (385)
T ss_dssp EETT-TT---EEEETTSCEEECSEEEECCCEEECCCCC
T ss_pred EECC-CC---EEEECCCCEEECCEEEEecCCCcCCCCC
Confidence 9853 22 4788999999999999999998875433
No 166
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.30 E-value=9.5e-07 Score=89.55 Aligned_cols=99 Identities=15% Similarity=0.221 Sum_probs=75.9
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||||+.|+.+|..|++.|. +|++++..+... +.+.. .+ .....+.
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~d~-----------~~-----------~~~l~~~ 235 (479)
T 2hqm_A 184 QPKKVVVVGAGYIGIELAGVFHGLGS---ETHLVIRGETVL---RKFDE-----------CI-----------QNTITDH 235 (479)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTC---EEEEECSSSSSC---TTSCH-----------HH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCC---ceEEEEeCCccc---cccCH-----------HH-----------HHHHHHH
Confidence 45799999999999999999999986 899999876421 10100 00 1123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCC----cEEEeCCC-eEEEeccEEeccCCCCCc
Q 012165 130 YKEKGIEMIYQDPVTSIDIEK----QTLITNSG-KLLKYGSLIVATGCTASR 176 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~----~~v~~~~g-~~~~yd~lVlAtG~~~~~ 176 (469)
+++.|++++.+++|.+++.++ ..|++.+| +++++|.||+|+|.+|..
T Consensus 236 l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 236 YVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp HHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECC
T ss_pred HHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCcc
Confidence 788899999999999997642 36788888 789999999999988763
No 167
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.30 E-value=2.2e-06 Score=84.58 Aligned_cols=35 Identities=26% Similarity=0.522 Sum_probs=32.1
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (469)
++||+|||||++|+++|..|+++|. +|+|+|+.+.
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~---~V~vlE~~~~ 38 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGH---RVLVLERHTF 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCC---eEEEEeCCCC
Confidence 4799999999999999999999987 7999999764
No 168
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.29 E-value=1e-06 Score=87.22 Aligned_cols=98 Identities=19% Similarity=0.258 Sum_probs=75.4
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (469)
.++++|||+|+.|+.+|..|++.|. +|++++..+.+.-. .+. ..+ .....+.+
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~---~Vtvv~~~~~~~~~--~~~-----------~~~-----------~~~l~~~l 194 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGL---EVDVVELAPRVMAR--VVT-----------PEI-----------SSYFHDRH 194 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSTTTT--TSC-----------HHH-----------HHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC---EEEEEeCCCcchhh--ccC-----------HHH-----------HHHHHHHH
Confidence 5789999999999999999999986 89999987643100 000 000 11234567
Q ss_pred HHCCcEEEeCCcEEEEeCCCc---EEEeCCCeEEEeccEEeccCCCCC
Q 012165 131 KEKGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 131 ~~~~i~~~~~~~v~~id~~~~---~v~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
++.|++++.+++|.++..++. .|.+.+|+++++|.+|+|+|.+|.
T Consensus 195 ~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~ 242 (404)
T 3fg2_P 195 SGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPN 242 (404)
T ss_dssp HHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEEC
T ss_pred HhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCccC
Confidence 889999999999999987543 578899999999999999998875
No 169
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.29 E-value=3.5e-06 Score=83.22 Aligned_cols=34 Identities=24% Similarity=0.429 Sum_probs=31.5
Q ss_pred cEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 012165 53 EFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (469)
Q Consensus 53 ~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~ 89 (469)
+|+|||||++|+++|..|+++|+ +|+|+|+.+.+
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~---~v~v~Er~~~~ 36 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGI---KVTIYERNSAA 36 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC---EEEEECSSCSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCC---CEEEEecCCCC
Confidence 79999999999999999999998 79999997754
No 170
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.29 E-value=2.5e-06 Score=87.53 Aligned_cols=53 Identities=15% Similarity=0.273 Sum_probs=43.2
Q ss_pred eHHHHHH-cCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccC
Q 012165 236 YEQLYQQ-NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 289 (469)
Q Consensus 236 ~~~~l~~-~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 289 (469)
+.+.+++ .|++++.+ +|++++.++++.+..|.+++|+++.+|+||.|.|....
T Consensus 181 L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 181 LTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred HHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 3455666 89999999 69999876566666788888888999999999999765
No 171
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.29 E-value=1e-06 Score=91.79 Aligned_cols=97 Identities=20% Similarity=0.376 Sum_probs=76.9
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (469)
.++++|||||+.|+.+|..|++.|. +|++++..+... +.+.. .+ .....+.+
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~~~-----------~~-----------~~~l~~~l 238 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGI---EVTLVEMANQVM---PPIDY-----------EM-----------AAYVHEHM 238 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSC---TTSCH-----------HH-----------HHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC---eEEEEecCCccc---ccCCH-----------HH-----------HHHHHHHH
Confidence 5789999999999999999999986 899998765421 10100 00 11245667
Q ss_pred HHCCcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCC
Q 012165 131 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 131 ~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
++.|++++.+++|..++.+...|++.+|+++++|.||+|+|.+|.
T Consensus 239 ~~~GV~i~~~~~v~~i~~~~~~v~~~~g~~i~~D~Vi~a~G~~p~ 283 (588)
T 3ics_A 239 KNHDVELVFEDGVDALEENGAVVRLKSGSVIQTDMLILAIGVQPE 283 (588)
T ss_dssp HHTTCEEECSCCEEEEEGGGTEEEETTSCEEECSEEEECSCEEEC
T ss_pred HHcCCEEEECCeEEEEecCCCEEEECCCCEEEcCEEEEccCCCCC
Confidence 889999999999999988767899999999999999999998765
No 172
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.28 E-value=6.4e-07 Score=90.20 Aligned_cols=98 Identities=15% Similarity=0.291 Sum_probs=72.8
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||||+.|+.+|..|++.|. +|+++++.+.+. |.+.. .+ .....+.
T Consensus 169 ~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~~~-----------~~-----------~~~l~~~ 220 (455)
T 1ebd_A 169 VPKSLVVIGGGYIGIELGTAYANFGT---KVTILEGAGEIL---SGFEK-----------QM-----------AAIIKKR 220 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSSS---TTSCH-----------HH-----------HHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC---cEEEEEcCCccc---cccCH-----------HH-----------HHHHHHH
Confidence 35799999999999999999999986 899999875421 00000 00 1123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeC---CCeEEEeccEEeccCCCCC
Q 012165 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITN---SGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~~--~v~~~---~g~~~~yd~lVlAtG~~~~ 175 (469)
+++.|++++.+++|.+++.++. .+++. +++++++|.+|+|+|.+|.
T Consensus 221 l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~ 271 (455)
T 1ebd_A 221 LKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPN 271 (455)
T ss_dssp HHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEES
T ss_pred HHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCcc
Confidence 7889999999999999986553 34443 4567999999999998876
No 173
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.28 E-value=1.1e-06 Score=89.55 Aligned_cols=98 Identities=17% Similarity=0.301 Sum_probs=75.9
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHc---CCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEH---GMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQT 126 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~---g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (469)
..++++|||||+.|+.+|..|++. |. +|++++..+... +.+.. .+ ....
T Consensus 190 ~~~~vvViGgG~ig~E~A~~l~~~~~~g~---~Vtlv~~~~~~l---~~~d~-----------~~-----------~~~l 241 (495)
T 2wpf_A 190 PPRRVLTVGGGFISVEFAGIFNAYKPPGG---KVTLCYRNNLIL---RGFDE-----------TI-----------REEV 241 (495)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHCCTTC---EEEEEESSSSSC---TTSCH-----------HH-----------HHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhCCCCC---eEEEEEcCCccc---cccCH-----------HH-----------HHHH
Confidence 357999999999999999999998 75 899999876421 10100 00 1124
Q ss_pred HhHHHHCCcEEEeCCcEEEEeCCC---cEEEeCCCeEEEeccEEeccCCCCC
Q 012165 127 PEWYKEKGIEMIYQDPVTSIDIEK---QTLITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 127 ~~~~~~~~i~~~~~~~v~~id~~~---~~v~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
.+.+++.||+++++++|.+++.++ ..|++.+|+++++|.||+|+|.+|.
T Consensus 242 ~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~ 293 (495)
T 2wpf_A 242 TKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPR 293 (495)
T ss_dssp HHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEEC
T ss_pred HHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCccc
Confidence 566788999999999999998653 3688889988999999999998876
No 174
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.26 E-value=1.2e-06 Score=89.11 Aligned_cols=99 Identities=17% Similarity=0.255 Sum_probs=76.3
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHc---CCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEH---GMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQT 126 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~---g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (469)
..++++|||||+.|+.+|..|++. |. +|+++++.+... +.+.. .+ ....
T Consensus 186 ~~~~vvViGgG~ig~E~A~~l~~~~~~g~---~Vtlv~~~~~~l---~~~d~-----------~~-----------~~~l 237 (490)
T 1fec_A 186 APKRALCVGGGYISIEFAGIFNAYKARGG---QVDLAYRGDMIL---RGFDS-----------EL-----------RKQL 237 (490)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHSCTTC---EEEEEESSSSSS---TTSCH-----------HH-----------HHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhccCcC---eEEEEEcCCCcc---cccCH-----------HH-----------HHHH
Confidence 357999999999999999999998 75 899999876421 11100 00 1124
Q ss_pred HhHHHHCCcEEEeCCcEEEEeCCC---cEEEeCCCeEEEeccEEeccCCCCCc
Q 012165 127 PEWYKEKGIEMIYQDPVTSIDIEK---QTLITNSGKLLKYGSLIVATGCTASR 176 (469)
Q Consensus 127 ~~~~~~~~i~~~~~~~v~~id~~~---~~v~~~~g~~~~yd~lVlAtG~~~~~ 176 (469)
.+.+++.|++++.+++|.+++.++ ..|++.+|+++++|.||+|+|.+|..
T Consensus 238 ~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 238 TEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRS 290 (490)
T ss_dssp HHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred HHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCc
Confidence 566788999999999999998653 36788888889999999999988763
No 175
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.25 E-value=1.5e-06 Score=86.78 Aligned_cols=99 Identities=15% Similarity=0.294 Sum_probs=74.7
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||||+.|+.+|..|++.|. +|++++..+... .. .+ ...+ .....+.
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~~G~---~Vtlv~~~~~~l------~~-~~------~~~~-----------~~~l~~~ 200 (431)
T 1q1r_A 148 ADNRLVVIGGGYIGLEVAATAIKANM---HVTLLDTAARVL------ER-VT------APPV-----------SAFYEHL 200 (431)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSTT------TT-TS------CHHH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCC---EEEEEEeCCccc------cc-hh------hHHH-----------HHHHHHH
Confidence 35799999999999999999999986 799999865421 00 00 0000 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeC--C-Cc--EEEeCCCeEEEeccEEeccCCCCC
Q 012165 130 YKEKGIEMIYQDPVTSIDI--E-KQ--TLITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~--~-~~--~v~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
+++.|++++.++++.+++. + ++ .|.+.+|+++.+|.||+|+|.+|.
T Consensus 201 l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~ 251 (431)
T 1q1r_A 201 HREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPN 251 (431)
T ss_dssp HHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEEC
T ss_pred HHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcC
Confidence 7788999999999999986 3 33 578889989999999999998765
No 176
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.25 E-value=1.4e-06 Score=89.29 Aligned_cols=97 Identities=20% Similarity=0.237 Sum_probs=74.8
Q ss_pred CcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHHH
Q 012165 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYK 131 (469)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (469)
++++|||||+.|+.+|..|++.|. +|++++..+... +.+.. .+ .....+.++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~---~Vtlv~~~~~~l---~~~~~-----------~~-----------~~~l~~~l~ 266 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGR---RTVMLVRTEPLK---LIKDN-----------ET-----------RAYVLDRMK 266 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSCTTT---TCCSH-----------HH-----------HHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCC---eEEEEEecCccc---ccccH-----------HH-----------HHHHHHHHH
Confidence 799999999999999999999986 899999876421 00000 00 112456678
Q ss_pred HCCcEEEeCCcEEEEeC--CC----cEEEeCCCe-EEEeccEEeccCCCCCc
Q 012165 132 EKGIEMIYQDPVTSIDI--EK----QTLITNSGK-LLKYGSLIVATGCTASR 176 (469)
Q Consensus 132 ~~~i~~~~~~~v~~id~--~~----~~v~~~~g~-~~~yd~lVlAtG~~~~~ 176 (469)
+.|++++.+++|.+++. +. ..|++.+|+ ++++|.||+|+|.+|..
T Consensus 267 ~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 267 EQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRS 318 (523)
T ss_dssp HTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECC
T ss_pred hCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCC
Confidence 89999999999999986 33 357788887 89999999999988763
No 177
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.25 E-value=7.5e-07 Score=91.73 Aligned_cols=45 Identities=20% Similarity=0.386 Sum_probs=35.9
Q ss_pred HHHCCcEEEeCCcEEEEeCCC--c--EEEeCCCeEEEeccEEeccCCCCC
Q 012165 130 YKEKGIEMIYQDPVTSIDIEK--Q--TLITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~--~--~v~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
+.+.|++++.+ +|+.++.+. . .|++.+|+++.+|.||.|+|....
T Consensus 175 a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 175 AVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp HHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred HHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 34579999998 899997642 2 577888888999999999997654
No 178
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.25 E-value=1.8e-06 Score=88.43 Aligned_cols=98 Identities=10% Similarity=0.112 Sum_probs=74.9
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHh
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 128 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (469)
..+++++|||||+-|+..|..+++.|. +|||+++...++. . +.. + ......
T Consensus 221 ~lP~~lvIIGgG~IGlE~A~~~~~lG~---~VTii~~~~~L~~----~--------D~e---i-----------~~~l~~ 271 (542)
T 4b1b_A 221 KDPGKTLVVGASYVALECSGFLNSLGY---DVTVAVRSIVLRG----F--------DQQ---C-----------AVKVKL 271 (542)
T ss_dssp SCCCSEEEECCSHHHHHHHHHHHHHTC---CEEEEESSCSSTT----S--------CHH---H-----------HHHHHH
T ss_pred cCCceEEEECCCHHHHHHHHHHHhcCC---eEEEecccccccc----c--------chh---H-----------HHHHHH
Confidence 345799999999999999999999987 7999976433211 0 000 0 123456
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCc--EEEeCCCeEEEeccEEeccCCCCC
Q 012165 129 WYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 129 ~~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
.+++.++.++++..+..+...+. .|.+.++.++.+|.|++|+|-+|+
T Consensus 272 ~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pn 320 (542)
T 4b1b_A 272 YMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGD 320 (542)
T ss_dssp HHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEES
T ss_pred HHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCC
Confidence 78899999999999998877654 456778888999999999998775
No 179
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.24 E-value=8.1e-07 Score=90.15 Aligned_cols=99 Identities=13% Similarity=0.174 Sum_probs=74.5
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||||+.|+.+|..|++.|. +|+|++..+... +.+.. .+ .....+.
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~G~---~Vtlv~~~~~~l---~~~~~-----------~~-----------~~~l~~~ 235 (482)
T 1ojt_A 184 VPGKLLIIGGGIIGLEMGTVYSTLGS---RLDVVEMMDGLM---QGADR-----------DL-----------VKVWQKQ 235 (482)
T ss_dssp CCSEEEEESCSHHHHHHHHHHHHHTC---EEEEECSSSSSS---TTSCH-----------HH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCC---eEEEEEECCccc---cccCH-----------HH-----------HHHHHHH
Confidence 35799999999999999999999986 899999876421 00000 00 1123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeCC----CeEEEeccEEeccCCCCCc
Q 012165 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNS----GKLLKYGSLIVATGCTASR 176 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~~--~v~~~~----g~~~~yd~lVlAtG~~~~~ 176 (469)
+++.||+++.+++|.+++.++. .+++.+ |+++.+|.||+|+|.+|..
T Consensus 236 l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 236 NEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp HGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECG
T ss_pred HHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCC
Confidence 7788999999999999976543 566666 6779999999999988763
No 180
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.23 E-value=3e-06 Score=86.62 Aligned_cols=53 Identities=17% Similarity=0.274 Sum_probs=44.3
Q ss_pred eHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccC
Q 012165 236 YEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 289 (469)
Q Consensus 236 ~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 289 (469)
+.+.+++.|++++.+ +|++++.++++.+..|.+.+|+++.+|.||.|.|....
T Consensus 179 L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 179 LSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 445566789999999 89999876567667888999989999999999998764
No 181
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.23 E-value=9.8e-07 Score=91.80 Aligned_cols=37 Identities=24% Similarity=0.322 Sum_probs=32.2
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (469)
.+||||||||+||+++|..|++.|. +.+|+|||+.+.
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~-~~~V~vlEk~~~ 41 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANP-NAKIALISKVYP 41 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCT-TCCEEEEESSCG
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCC-CCcEEEEeCCCC
Confidence 4799999999999999999999982 348999999753
No 182
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.23 E-value=1.2e-06 Score=88.84 Aligned_cols=98 Identities=17% Similarity=0.316 Sum_probs=73.3
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (469)
.++++|||||+.|+.+|..|++.|. +|+++++.+... +.+.. .+ .....+.+
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~~~-----------~~-----------~~~l~~~l 234 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGS---KVTVVEFQPQIG---ASMDG-----------EV-----------AKATQKFL 234 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---SSSCH-----------HH-----------HHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCC---EEEEEEeCCccc---cccCH-----------HH-----------HHHHHHHH
Confidence 5799999999999999999999986 899999876421 10000 00 11235667
Q ss_pred HHCCcEEEeCCcEEEEeC--CCc--EEEeC-----CCeEEEeccEEeccCCCCCc
Q 012165 131 KEKGIEMIYQDPVTSIDI--EKQ--TLITN-----SGKLLKYGSLIVATGCTASR 176 (469)
Q Consensus 131 ~~~~i~~~~~~~v~~id~--~~~--~v~~~-----~g~~~~yd~lVlAtG~~~~~ 176 (469)
++.|++++.+++|.+++. ++. .+.+. +++++++|.||+|+|.+|..
T Consensus 235 ~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 289 (478)
T 1v59_A 235 KKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYI 289 (478)
T ss_dssp HHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECC
T ss_pred HHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCC
Confidence 889999999999999986 443 45554 35679999999999988763
No 183
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.22 E-value=1.6e-06 Score=87.83 Aligned_cols=98 Identities=11% Similarity=0.166 Sum_probs=72.9
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (469)
.++++|||||+.|+.+|..|++.|. +|+++++.+...-. .+.. .+ .....+.+
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l~~--~~~~-----------~~-----------~~~l~~~l 230 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGA---DVTAVEFLGHVGGV--GIDM-----------EI-----------SKNFQRIL 230 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSSCS--SCCH-----------HH-----------HHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCC---EEEEEeccCccCCc--ccCH-----------HH-----------HHHHHHHH
Confidence 5799999999999999999999986 89999987642100 0000 00 11245667
Q ss_pred HHCCcEEEeCCcEEEEeCCC---cEEEe-----CCCeEEEeccEEeccCCCCC
Q 012165 131 KEKGIEMIYQDPVTSIDIEK---QTLIT-----NSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 131 ~~~~i~~~~~~~v~~id~~~---~~v~~-----~~g~~~~yd~lVlAtG~~~~ 175 (469)
++.|++++.+++|.+++.++ ..+++ .+++++++|.||+|+|.+|.
T Consensus 231 ~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~ 283 (474)
T 1zmd_A 231 QKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPF 283 (474)
T ss_dssp HHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEEC
T ss_pred HHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcC
Confidence 88999999999999998655 23442 45678999999999998875
No 184
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.21 E-value=2.1e-06 Score=87.48 Aligned_cols=99 Identities=13% Similarity=0.250 Sum_probs=75.7
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||||+.|+.+|..|++.|. +|++++..+... +.+.. .+ .....+.
T Consensus 181 ~~~~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~d~-----------~~-----------~~~l~~~ 232 (499)
T 1xdi_A 181 LPDHLIVVGSGVTGAEFVDAYTELGV---PVTVVASQDHVL---PYEDA-----------DA-----------ALVLEES 232 (499)
T ss_dssp CCSSEEEESCSHHHHHHHHHHHHTTC---CEEEECSSSSSS---CCSSH-----------HH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCC---eEEEEEcCCccc---cccCH-----------HH-----------HHHHHHH
Confidence 35799999999999999999999986 799999776421 00000 00 1224566
Q ss_pred HHHCCcEEEeCCcEEEEeCCC--cEEEeCCCeEEEeccEEeccCCCCCc
Q 012165 130 YKEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTASR 176 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~--~~v~~~~g~~~~yd~lVlAtG~~~~~ 176 (469)
+++.|++++.+++|.+++.++ ..+.+.+|+++++|.||+|+|.+|..
T Consensus 233 l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 233 FAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp HHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred HHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 788999999999999998655 35667788889999999999988763
No 185
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.19 E-value=1.6e-06 Score=87.44 Aligned_cols=98 Identities=19% Similarity=0.263 Sum_probs=73.1
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||||+.|+.+|..|++.|. +|+++++.+.+. |.+.. .+ .....+.
T Consensus 170 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~~~-----------~~-----------~~~l~~~ 221 (464)
T 2a8x_A 170 LPKSIIIAGAGAIGMEFGYVLKNYGV---DVTIVEFLPRAL---PNEDA-----------DV-----------SKEIEKQ 221 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---TTSCH-----------HH-----------HHHHHHH
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCC---eEEEEEcCCccc---cccCH-----------HH-----------HHHHHHH
Confidence 35799999999999999999999986 899999875421 00000 00 1123466
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeC-CC--eEEEeccEEeccCCCCC
Q 012165 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITN-SG--KLLKYGSLIVATGCTAS 175 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~~--~v~~~-~g--~~~~yd~lVlAtG~~~~ 175 (469)
+++.|++++.++++.+++.++. .+.+. +| +++++|.+|+|+|.+|.
T Consensus 222 l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~ 272 (464)
T 2a8x_A 222 FKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPN 272 (464)
T ss_dssp HHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEEC
T ss_pred HHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCcc
Confidence 7888999999999999986543 45553 56 67999999999998875
No 186
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.19 E-value=2e-06 Score=87.64 Aligned_cols=35 Identities=17% Similarity=0.459 Sum_probs=31.8
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
+++||+|||||++|+++|..|+++|. +|+|+|+.+
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~~G~---~V~llE~~~ 36 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAGRGL---SVLMLEAQD 36 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCC---CEEEEECCC
Confidence 45899999999999999999999987 799999975
No 187
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.19 E-value=2.5e-06 Score=86.65 Aligned_cols=99 Identities=18% Similarity=0.315 Sum_probs=73.9
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHh
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 128 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (469)
...++++|||||+.|+.+|..|++.|. +|+++++.+... +. .+ + ..+ .....+
T Consensus 192 ~~~~~vvVIGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~~l------~~-~~---~---~~~-----------~~~l~~ 244 (490)
T 2bc0_A 192 KDIKRVAVVGAGYIGVELAEAFQRKGK---EVVLIDVVDTCL------AG-YY---D---RDL-----------TDLMAK 244 (490)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSTT------TT-TS---C---HHH-----------HHHHHH
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCC---eEEEEEcccchh------hh-HH---H---HHH-----------HHHHHH
Confidence 345799999999999999999999986 899999876421 00 00 0 000 112346
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCc--EEEeCCCeEEEeccEEeccCCCCC
Q 012165 129 WYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 129 ~~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
.+++.||+++.++++.+++.+++ .+.+ +++++++|.||+|+|.+|.
T Consensus 245 ~l~~~GV~i~~~~~v~~i~~~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~ 292 (490)
T 2bc0_A 245 NMEEHGIQLAFGETVKEVAGNGKVEKIIT-DKNEYDVDMVILAVGFRPN 292 (490)
T ss_dssp HHHTTTCEEEETCCEEEEECSSSCCEEEE-SSCEEECSEEEECCCEEEC
T ss_pred HHHhCCeEEEeCCEEEEEEcCCcEEEEEE-CCcEEECCEEEECCCCCcC
Confidence 67889999999999999987543 3555 6778999999999998875
No 188
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.17 E-value=2.4e-06 Score=86.36 Aligned_cols=98 Identities=15% Similarity=0.242 Sum_probs=72.4
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||||+.|+.+|..|++.|. +|+++++.+... |.+.. .+ .....+.
T Consensus 173 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~d~-----------~~-----------~~~l~~~ 224 (468)
T 2qae_A 173 VPKTMVVIGGGVIGLELGSVWARLGA---EVTVVEFAPRCA---PTLDE-----------DV-----------TNALVGA 224 (468)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---TTSCH-----------HH-----------HHHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHhCC---EEEEEecCCccc---ccCCH-----------HH-----------HHHHHHH
Confidence 45799999999999999999999986 899999875421 10000 00 1124566
Q ss_pred H-HHCCcEEEeCCcEEEEeCCC--cEEEeC--CC--eEEEeccEEeccCCCCC
Q 012165 130 Y-KEKGIEMIYQDPVTSIDIEK--QTLITN--SG--KLLKYGSLIVATGCTAS 175 (469)
Q Consensus 130 ~-~~~~i~~~~~~~v~~id~~~--~~v~~~--~g--~~~~yd~lVlAtG~~~~ 175 (469)
+ ++.|++++.+++|.+++.++ ..+.+. +| +++++|.||+|+|.+|.
T Consensus 225 l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~ 277 (468)
T 2qae_A 225 LAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPF 277 (468)
T ss_dssp HHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEEC
T ss_pred HhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccC
Confidence 7 88999999999999998654 345554 56 67999999999998875
No 189
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.17 E-value=6.8e-06 Score=82.22 Aligned_cols=82 Identities=24% Similarity=0.403 Sum_probs=68.7
Q ss_pred CeEEEEcCChHHHHHHHHHHh---CCCeEe-----------------------------eeHHHHHHcCcEEEcCCeEEE
Q 012165 208 KKVVVVGGGYIGMEVAAAAVG---WKLDTT-----------------------------RYEQLYQQNGVKFVKGASIKN 255 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~---~g~~v~-----------------------------~~~~~l~~~gV~~~~~~~v~~ 255 (469)
++|+|||||+.|+.+|..|++ .+.+++ .+.+.+++.||+++. ..++.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~ 83 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIA-QSAEQ 83 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEEC-SCEEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEE-eEEEE
Confidence 689999999999999999998 788887 467788889999986 58999
Q ss_pred EEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCchhh
Q 012165 256 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFE 294 (469)
Q Consensus 256 i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~ 294 (469)
++.+ +. .|.+++|+++.+|.+|+|+|.+|+...+.
T Consensus 84 id~~-~~---~V~~~~g~~i~~d~lviAtG~~~~~~~ip 118 (437)
T 3sx6_A 84 IDAE-AQ---NITLADGNTVHYDYLMIATGPKLAFENVP 118 (437)
T ss_dssp EETT-TT---EEEETTSCEEECSEEEECCCCEECGGGST
T ss_pred EEcC-CC---EEEECCCCEEECCEEEECCCCCcCcccCC
Confidence 9853 22 47788998999999999999998755444
No 190
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.16 E-value=3.6e-06 Score=84.03 Aligned_cols=77 Identities=27% Similarity=0.446 Sum_probs=63.7
Q ss_pred CeEEEEcCChHHHHHHHHHHhCC--CeEe-----------------------------eeHHHHHHcCcEEEcCCeEEEE
Q 012165 208 KKVVVVGGGYIGMEVAAAAVGWK--LDTT-----------------------------RYEQLYQQNGVKFVKGASIKNL 256 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g--~~v~-----------------------------~~~~~l~~~gV~~~~~~~v~~i 256 (469)
|+|+|||+|+.|+.+|..|++++ .+++ .+.+.+++.||+++.+ ++++|
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~-~v~~I 81 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEe-EEEEE
Confidence 68999999999999999999876 4555 3456677889999977 69999
Q ss_pred EeCCCCcEEEEEcCCCCEEeCCEEEEccCCccC
Q 012165 257 EAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 289 (469)
Q Consensus 257 ~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 289 (469)
+.+ .+ .|++++|+++++|.+|+|+|.++.
T Consensus 82 d~~--~~--~V~~~~g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 82 DPD--AN--TVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp ETT--TT--EEEETTCCEEECSEEEECCCCEEE
T ss_pred ECC--CC--EEEECCCCEEECCEEEEeCCCCcc
Confidence 853 33 478899999999999999998754
No 191
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.16 E-value=1.5e-06 Score=91.27 Aligned_cols=37 Identities=27% Similarity=0.393 Sum_probs=33.1
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHH-cCCCCCcEEEEcCCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVE-HGMADGRLCIVSKEAYA 89 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~-~g~~~~~V~vie~~~~~ 89 (469)
.++||+|||||++|+++|..|++ .|. +|+|||+.+..
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~---~V~viEr~~~~ 68 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDI---RTCIVEQKEGP 68 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTS---CEEEECSSSSC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCC---CEEEEeCCCCC
Confidence 45799999999999999999999 887 79999998654
No 192
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.16 E-value=7e-07 Score=88.49 Aligned_cols=35 Identities=23% Similarity=0.359 Sum_probs=31.8
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHc--CCCCCcEEEEcCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEH--GMADGRLCIVSKEA 87 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~--g~~~~~V~vie~~~ 87 (469)
.++||+|||||++|+++|..|+++ |. +|+|||+..
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~---~V~vlE~~~ 71 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGR---SLLLVEEGG 71 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTS---CEEEECSSC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCC---eEEEEeCCC
Confidence 458999999999999999999999 87 799999875
No 193
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.15 E-value=2.3e-06 Score=86.54 Aligned_cols=98 Identities=16% Similarity=0.175 Sum_probs=74.5
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHc-CCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEH-GMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~-g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
.++++|||+|+.|+.+|..|++. |. +|++++..+...-. .+ . ..+ .....+.
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~---~Vtlv~~~~~~l~~--~~--------~---~~~-----------~~~l~~~ 211 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGI---DTTVVELADQIMPG--FT--------S---KSL-----------SQMLRHD 211 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCC---EEEEECSSSSSSTT--TS--------C---HHH-----------HHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCC---cEEEEEccCccccc--cc--------C---HHH-----------HHHHHHH
Confidence 57999999999999999999998 86 89999977542100 00 0 000 1223456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeCCCeEEEeccEEeccCCCCC
Q 012165 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
+++.|++++.+++|.+++.++. ++.+.+|+++++|.||+|+|.+|.
T Consensus 212 l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~ 259 (472)
T 3iwa_A 212 LEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSPN 259 (472)
T ss_dssp HHHTTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEEEC
T ss_pred HHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCCcC
Confidence 7889999999999999987443 467788889999999999998765
No 194
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.14 E-value=4.9e-06 Score=83.62 Aligned_cols=97 Identities=15% Similarity=0.217 Sum_probs=72.7
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (469)
.++++|||+|..|+.+|..|++.|. +|+++++.+... +. .+ +. .+ .....+.+
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l---~~----~~---d~---~~-----------~~~l~~~l 199 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKK---TVHVFESLENLL---PK----YF---DK---EM-----------VAEVQKSL 199 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSSS---TT----TC---CH---HH-----------HHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC---eEEEEEccCccc---cc----cC---CH---HH-----------HHHHHHHH
Confidence 5789999999999999999999986 899999876421 00 00 00 00 11245667
Q ss_pred HHCCcEEEeCCcEEEEeCCC-c-EEEeCCCeEEEeccEEeccCCCCC
Q 012165 131 KEKGIEMIYQDPVTSIDIEK-Q-TLITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 131 ~~~~i~~~~~~~v~~id~~~-~-~v~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
++.|++++.+++|.+++..+ + .|.++++ ++++|.||+|+|.+|.
T Consensus 200 ~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~p~ 245 (452)
T 3oc4_A 200 EKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLHPQ 245 (452)
T ss_dssp HTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCBCC
T ss_pred HHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCCCC
Confidence 88899999999999998433 3 4677766 7999999999998875
No 195
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.14 E-value=7.2e-06 Score=83.90 Aligned_cols=61 Identities=18% Similarity=0.361 Sum_probs=48.0
Q ss_pred HHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCc--hhhhcCCc
Q 012165 238 QLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS--PFERVGLN 299 (469)
Q Consensus 238 ~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~--~~~~~gl~ 299 (469)
+.+++.|++++++++|+++..+ ++.+..|.+.+|+++.+|.||+|+|..+... .+...|+.
T Consensus 228 ~~l~~~Gv~I~~~t~V~~I~~~-~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~~~~~~l~~~Gi~ 290 (549)
T 3nlc_A 228 ATIIELGGEIRFSTRVDDLHME-DGQITGVTLSNGEEIKSRHVVLAVGHSARDTFEMLHERGVY 290 (549)
T ss_dssp HHHHHTTCEEESSCCEEEEEES-SSBEEEEEETTSCEEECSCEEECCCTTCHHHHHHHHHTTCC
T ss_pred HHHHhcCCEEEeCCEEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCCChhhHHHHHHHcCCC
Confidence 3455689999999999999864 5667789999999999999999999988522 34555544
No 196
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.13 E-value=1.9e-06 Score=87.08 Aligned_cols=98 Identities=15% Similarity=0.308 Sum_probs=73.3
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||||+.|+.+|..|++.|. +|+++++.+... |.+.. .+ .....+.
T Consensus 176 ~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtli~~~~~~l---~~~~~-----------~~-----------~~~l~~~ 227 (470)
T 1dxl_A 176 IPKKLVVIGAGYIGLEMGSVWGRIGS---EVTVVEFASEIV---PTMDA-----------EI-----------RKQFQRS 227 (470)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHHHTC---EEEEECSSSSSS---TTSCH-----------HH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCC---cEEEEEcCCccc---ccccH-----------HH-----------HHHHHHH
Confidence 35799999999999999999999986 899999876421 10000 00 1123566
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeC---CC--eEEEeccEEeccCCCCC
Q 012165 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITN---SG--KLLKYGSLIVATGCTAS 175 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~~--~v~~~---~g--~~~~yd~lVlAtG~~~~ 175 (469)
+++.|++++.+++|.+++.++. .+.+. +| +++++|.||+|+|.+|.
T Consensus 228 l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~ 280 (470)
T 1dxl_A 228 LEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPF 280 (470)
T ss_dssp HHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEEC
T ss_pred HHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcC
Confidence 7889999999999999987653 44543 44 67999999999998875
No 197
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.13 E-value=1.2e-06 Score=83.68 Aligned_cols=38 Identities=26% Similarity=0.347 Sum_probs=33.3
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHc--CCCCCcEEEEcCCCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEH--GMADGRLCIVSKEAYAP 90 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~--g~~~~~V~vie~~~~~~ 90 (469)
..+||+|||||++|+++|..|+++ |. +|+|+|+.+...
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~---~V~LiEk~~~~G 117 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDL---RITIVEAGVAPG 117 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTS---CEEEEESSSSCC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCC---EEEEEeCCCccC
Confidence 458999999999999999999997 66 799999987543
No 198
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.13 E-value=3.6e-06 Score=85.41 Aligned_cols=98 Identities=20% Similarity=0.343 Sum_probs=75.3
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||+|+.|+.+|..|++.|. +|++++..+... +.+.. .+ .....+.
T Consensus 190 ~~~~v~ViGgG~~g~e~A~~l~~~g~---~Vtli~~~~~~l---~~~~~-----------~~-----------~~~l~~~ 241 (484)
T 3o0h_A 190 LPKSIVIVGGGYIGVEFANIFHGLGV---KTTLLHRGDLIL---RNFDY-----------DL-----------RQLLNDA 241 (484)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---TTSCH-----------HH-----------HHHHHHH
T ss_pred cCCcEEEECcCHHHHHHHHHHHHcCC---eEEEEECCCccc---cccCH-----------HH-----------HHHHHHH
Confidence 35799999999999999999999876 799999776421 00000 00 1123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeCCCeEEEeccEEeccCCCCC
Q 012165 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
+++.|++++.+++|.+++.++. .|++.+|+++++|.||+|+|.+|.
T Consensus 242 l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~ 289 (484)
T 3o0h_A 242 MVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPN 289 (484)
T ss_dssp HHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEEC
T ss_pred HHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcC
Confidence 7788999999999999987543 678889988999999999998775
No 199
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.13 E-value=3.3e-06 Score=84.86 Aligned_cols=99 Identities=15% Similarity=0.308 Sum_probs=72.6
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||||+.|+.+|..|++.|. +|+++++.+...-. .+.. .+ .....+.
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l~~--~~~~-----------~~-----------~~~l~~~ 200 (452)
T 2cdu_A 148 KAKTITIIGSGYIGAELAEAYSNQNY---NVNLIDGHERVLYK--YFDK-----------EF-----------TDILAKD 200 (452)
T ss_dssp GCSEEEEECCSHHHHHHHHHHHTTTC---EEEEEESSSSTTTT--TSCH-----------HH-----------HHHHHHH
T ss_pred cCCeEEEECcCHHHHHHHHHHHhcCC---EEEEEEcCCchhhh--hhhh-----------hH-----------HHHHHHH
Confidence 35789999999999999999999876 89999987542100 0000 00 1123566
Q ss_pred HHHCCcEEEeCCcEEEEeCCCcEE--EeCCCeEEEeccEEeccCCCCC
Q 012165 130 YKEKGIEMIYQDPVTSIDIEKQTL--ITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~~~v--~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
+++.|++++.+++|.+++.++..+ ...+|+++++|.||+|+|.+|.
T Consensus 201 l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 201 YEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGFRPN 248 (452)
T ss_dssp HHHTTCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEEC
T ss_pred HHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCCCCC
Confidence 788999999999999998633322 2337788999999999998875
No 200
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.12 E-value=3.2e-06 Score=87.49 Aligned_cols=97 Identities=15% Similarity=0.285 Sum_probs=73.6
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (469)
.++++|||||+.|+.+|..|++.|. +|+++++.+... +.+.. .+ .....+.+
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~~~-----------~~-----------~~~l~~~l 202 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGI---KTTLLELADQVM---TPVDR-----------EM-----------AGFAHQAI 202 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSSC---TTSCH-----------HH-----------HHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCC---cEEEEEcCCccc---hhcCH-----------HH-----------HHHHHHHH
Confidence 4699999999999999999999986 799999865320 10000 00 01234567
Q ss_pred HHCCcEEEeCCcEEEEeC-------------------CCc--EEEeCCCeEEEeccEEeccCCCCC
Q 012165 131 KEKGIEMIYQDPVTSIDI-------------------EKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 131 ~~~~i~~~~~~~v~~id~-------------------~~~--~v~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
++.|++++.++++.+++. ... .+.+.+|+++++|.||+|+|.+|.
T Consensus 203 ~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 268 (565)
T 3ntd_A 203 RDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPE 268 (565)
T ss_dssp HHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEEC
T ss_pred HHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccc
Confidence 889999999999999976 222 567788889999999999998775
No 201
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.12 E-value=2.9e-06 Score=86.01 Aligned_cols=97 Identities=18% Similarity=0.270 Sum_probs=72.5
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||||+.|+.+|..|++.|. +|+++++.+... +.+. ..+ .....+.
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~~-----------~~~-----------~~~l~~~ 236 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGK---KVRMIERNDHIG---TIYD-----------GDM-----------AEYIYKE 236 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTC---EEEEECCGGGTT---SSSC-----------HHH-----------HHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCC---eEEEEEeCCchh---hcCC-----------HHH-----------HHHHHHH
Confidence 46899999999999999999999986 799999875421 0000 000 1123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCcE--EEeCCCeEEEeccEEeccCCCCC
Q 012165 130 YKEKGIEMIYQDPVTSIDIEKQT--LITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~~~--v~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
+++.|++++.+++|.+++.+++. +.++ +.++++|.||+|+|..|.
T Consensus 237 l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~-~~~i~~D~vi~a~G~~p~ 283 (480)
T 3cgb_A 237 ADKHHIEILTNENVKAFKGNERVEAVETD-KGTYKADLVLVSVGVKPN 283 (480)
T ss_dssp HHHTTCEEECSCCEEEEEESSBEEEEEET-TEEEECSEEEECSCEEES
T ss_pred HHHcCcEEEcCCEEEEEEcCCcEEEEEEC-CCEEEcCEEEECcCCCcC
Confidence 78899999999999999876542 4554 457999999999998875
No 202
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.11 E-value=3.8e-05 Score=72.93 Aligned_cols=37 Identities=22% Similarity=0.469 Sum_probs=32.6
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHc--CCCCCcEEEEcCCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEH--GMADGRLCIVSKEAYA 89 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~--g~~~~~V~vie~~~~~ 89 (469)
..+||+|||||++|+++|..|++. |. +|+|+|+.+..
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~---~V~v~e~~~~~ 102 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDL---KVCIIESSVAP 102 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTS---CEEEECSSSSC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCC---eEEEEecCccc
Confidence 346999999999999999999998 65 89999998754
No 203
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.10 E-value=3.7e-06 Score=86.72 Aligned_cols=37 Identities=16% Similarity=0.226 Sum_probs=33.2
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~ 89 (469)
..+||+|||||++|+++|..|++.|. +|+|+|+.+..
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~---~V~vlEr~~~~ 61 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQV---GHLVVEQTDGT 61 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSCSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEeCCCCC
Confidence 34799999999999999999999987 79999998654
No 204
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.09 E-value=4.5e-06 Score=84.25 Aligned_cols=96 Identities=18% Similarity=0.269 Sum_probs=73.1
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||||+.|+.+|..|++.|. +|+++++.+.+. | +.. .+ .....+.
T Consensus 175 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l---~-~~~-----------~~-----------~~~l~~~ 225 (467)
T 1zk7_A 175 IPERLAVIGSSVVALELAQAFARLGS---KVTVLARNTLFF---R-EDP-----------AI-----------GEAVTAA 225 (467)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSCTTT---T-SCH-----------HH-----------HHHHHHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHcCC---EEEEEEECCccC---C-CCH-----------HH-----------HHHHHHH
Confidence 35799999999999999999999986 899999876420 0 100 00 1234566
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeCCCeEEEeccEEeccCCCCC
Q 012165 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
+++.|++++.+++|.+++.++. .|.++ +.++++|.||+|+|.+|.
T Consensus 226 l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~ 272 (467)
T 1zk7_A 226 FRAEGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRTPN 272 (467)
T ss_dssp HHHTTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEEES
T ss_pred HHhCCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcC
Confidence 7889999999999999986554 35565 557999999999998875
No 205
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.07 E-value=2.2e-05 Score=75.71 Aligned_cols=78 Identities=18% Similarity=0.201 Sum_probs=63.2
Q ss_pred CeEEEEcCChHHHHHHHHHHhCCCeEe--------------------------------------------------eeH
Q 012165 208 KKVVVVGGGYIGMEVAAAAVGWKLDTT--------------------------------------------------RYE 237 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~v~--------------------------------------------------~~~ 237 (469)
.+|+|||+|+.|+.+|..|++.|.+++ .+.
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLA 83 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHHH
Confidence 379999999999999999999988776 123
Q ss_pred HHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCc
Q 012165 238 QLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 287 (469)
Q Consensus 238 ~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~ 287 (469)
+.+++.|++++++++|++++.. ++....|.+.+| ++.+|.||+|+|..
T Consensus 84 ~~~~~~~~~~~~~~~v~~i~~~-~~~~~~v~~~~g-~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 84 QYEQKYALPVLRPIRVQRVSHF-GERLRVVARDGR-QWLARAVISATGTW 131 (357)
T ss_dssp HHHHHTTCCEECSCCEEEEEEE-TTEEEEEETTSC-EEEEEEEEECCCSG
T ss_pred HHHHHcCCEEEcCCEEEEEEEC-CCcEEEEEeCCC-EEEeCEEEECCCCC
Confidence 4456679999999999999864 333322788887 89999999999963
No 206
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.07 E-value=6.7e-06 Score=84.89 Aligned_cols=36 Identities=17% Similarity=0.326 Sum_probs=33.1
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
+..+||+|||||++|+++|..|+++|+ +|+|+|+.+
T Consensus 16 ~~~~DVvVIGgGi~Gl~~A~~La~~G~---~V~LlEk~d 51 (561)
T 3da1_A 16 EKQLDLLVIGGGITGAGIALDAQVRGI---QTGLVEMND 51 (561)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHTTTC---CEEEEESSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCC---cEEEEECCC
Confidence 456899999999999999999999998 799999975
No 207
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.07 E-value=4.8e-06 Score=84.65 Aligned_cols=97 Identities=14% Similarity=0.173 Sum_probs=70.9
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||||+.|+.+|..|++.|. +|+++++.+... +.+.. .+ .....+.
T Consensus 173 ~~k~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~d~-----------~~-----------~~~l~~~ 224 (492)
T 3ic9_A 173 LPKSVAVFGPGVIGLELGQALSRLGV---IVKVFGRSGSVA---NLQDE-----------EM-----------KRYAEKT 224 (492)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHHTTC---EEEEECCTTCCT---TCCCH-----------HH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCC---eEEEEEECCccc---ccCCH-----------HH-----------HHHHHHH
Confidence 46899999999999999999999986 799999876531 10000 00 0123345
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeC--CC--eEEEeccEEeccCCCCC
Q 012165 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITN--SG--KLLKYGSLIVATGCTAS 175 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~~--~v~~~--~g--~~~~yd~lVlAtG~~~~ 175 (469)
+++. ++++.++++..+..++. .+.+. +| .++++|.||+|+|.+|.
T Consensus 225 l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~ 275 (492)
T 3ic9_A 225 FNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKAN 275 (492)
T ss_dssp HHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEES
T ss_pred HhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccC
Confidence 5566 99999999999976543 45553 66 67999999999998875
No 208
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.06 E-value=5.3e-06 Score=80.75 Aligned_cols=104 Identities=23% Similarity=0.346 Sum_probs=68.6
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (469)
.++|+|||+|..|+.+|..|++.|. +|+++++.+...- +... + . ..++.. ......+.+
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~---~V~lv~~~~~~~~--~~~d-----~-~---~~~~~~-------~~~~l~~~l 224 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGS---DIALYTSTTGLND--PDAD-----P-S---VRLSPY-------TRQRLGNVI 224 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTC---EEEEECC-----------------C-T---TSCCHH-------HHHHHHHHH
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCC---eEEEEecCCCCCC--CCCC-----C-C---ccCCHH-------HHHHHHHHH
Confidence 4689999999999999999999876 8999998764310 0000 0 0 000000 001234455
Q ss_pred HHCC-cEEEeCCcEEEEeC--CCcEEEeCCCeEEE-eccEEeccCCCCC
Q 012165 131 KEKG-IEMIYQDPVTSIDI--EKQTLITNSGKLLK-YGSLIVATGCTAS 175 (469)
Q Consensus 131 ~~~~-i~~~~~~~v~~id~--~~~~v~~~~g~~~~-yd~lVlAtG~~~~ 175 (469)
++.+ ++++.+.++..++. +...|++.+|+++. +|.+|+|||..|.
T Consensus 225 ~~~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~~~ 273 (369)
T 3d1c_A 225 KQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDAT 273 (369)
T ss_dssp HTTCCEEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCBCGG
T ss_pred hhCCcEEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeeccCCc
Confidence 6675 99999999999954 33367788887775 5999999998875
No 209
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.06 E-value=1.5e-05 Score=78.74 Aligned_cols=82 Identities=24% Similarity=0.268 Sum_probs=65.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhCCC--eEe----------------------------eeHHHHHHcCcEEEcCCeEEEE
Q 012165 207 AKKVVVVGGGYIGMEVAAAAVGWKL--DTT----------------------------RYEQLYQQNGVKFVKGASIKNL 256 (469)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~--~v~----------------------------~~~~~l~~~gV~~~~~~~v~~i 256 (469)
+|+|+|||+|+.|+.+|..|++.+. +|+ .-.+.+.+.||+++.+ +++.|
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~-~v~~i 80 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHD-SALGI 80 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECS-CEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEe-EEEEE
Confidence 7899999999999999999987664 555 2234566789999876 68899
Q ss_pred EeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCchh
Q 012165 257 EAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPF 293 (469)
Q Consensus 257 ~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~ 293 (469)
+.+ .+ .+.+.+|+++.+|.+|+|+|.+++...+
T Consensus 81 d~~--~~--~v~~~~g~~i~yd~LviAtG~~~~~~~i 113 (401)
T 3vrd_B 81 DPD--KK--LVKTAGGAEFAYDRCVVAPGIDLLYDKI 113 (401)
T ss_dssp ETT--TT--EEEETTSCEEECSEEEECCCEEECGGGS
T ss_pred Ecc--Cc--EEEecccceeecceeeeccCCccccCCc
Confidence 853 33 4678999999999999999999875433
No 210
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.06 E-value=8.6e-06 Score=83.18 Aligned_cols=37 Identities=16% Similarity=0.149 Sum_probs=33.5
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~ 89 (469)
..+||||||+|+||++||.+|++.|. +|+|+|+.+..
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~---~V~vlEk~~~~ 76 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGA---DVLVLERTSGW 76 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC---cEEEEeCCCCC
Confidence 45899999999999999999999987 79999998754
No 211
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.06 E-value=5.9e-06 Score=83.29 Aligned_cols=97 Identities=19% Similarity=0.300 Sum_probs=74.4
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||+|+.|+.+|..|++.|. +|++++..+... +.+.. .+ .....+.
T Consensus 169 ~~~~v~ViGgG~~g~e~A~~l~~~g~---~Vt~v~~~~~~l---~~~~~-----------~~-----------~~~l~~~ 220 (463)
T 4dna_A 169 LPESILIAGGGYIAVEFANIFHGLGV---KTTLIYRGKEIL---SRFDQ-----------DM-----------RRGLHAA 220 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---TTSCH-----------HH-----------HHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC---eEEEEEcCCccc---cccCH-----------HH-----------HHHHHHH
Confidence 36799999999999999999999886 899999876421 10000 00 1123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCC-c--EEE-eCCCeEEEeccEEeccCCCCC
Q 012165 130 YKEKGIEMIYQDPVTSIDIEK-Q--TLI-TNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~-~--~v~-~~~g~~~~yd~lVlAtG~~~~ 175 (469)
+++.|++++.++.|.+++.++ . .|. +.+|+ +++|.||+|+|.+|.
T Consensus 221 l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 221 MEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPN 269 (463)
T ss_dssp HHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEES
T ss_pred HHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccC
Confidence 788999999999999998753 2 677 88888 999999999998775
No 212
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.06 E-value=1.5e-05 Score=81.88 Aligned_cols=36 Identities=19% Similarity=0.312 Sum_probs=32.1
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~ 89 (469)
..+||||||||+||++||..|++ |. +|+|+|+.+..
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~---~V~vlEk~~~~ 42 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QH---QVIVLSKGPVT 42 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TS---CEEEECSSCTT
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CC---cEEEEECCCCC
Confidence 35799999999999999999999 87 79999998653
No 213
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.06 E-value=9e-06 Score=80.52 Aligned_cols=79 Identities=23% Similarity=0.424 Sum_probs=64.6
Q ss_pred CeEEEEcCChHHHHHHHHHHh---CCCeEe-----------------------------eeHHHHHHcCcEEEcCCeEEE
Q 012165 208 KKVVVVGGGYIGMEVAAAAVG---WKLDTT-----------------------------RYEQLYQQNGVKFVKGASIKN 255 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~---~g~~v~-----------------------------~~~~~l~~~gV~~~~~~~v~~ 255 (469)
++|+|||+|+.|+.+|..|++ .+.+++ .+.+.+++.|++++.+ +++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEG-TVEK 80 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEEC-EEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEe-eEEE
Confidence 579999999999999999999 888887 4567778899999988 8999
Q ss_pred EEeCCCCcEEEEEcCCCC----EEeCCEEEEccCCccCCc
Q 012165 256 LEAGSDGRVAAVKLEDGS----TIDADTIVIGIGAKPTVS 291 (469)
Q Consensus 256 i~~~~~~~v~~v~~~~g~----~i~~D~vi~a~G~~p~~~ 291 (469)
++.+ +. .|.+.+++ ++.+|.||+|+|.+|+..
T Consensus 81 i~~~-~~---~V~~~~g~~~~~~~~~d~lViAtG~~~~~~ 116 (409)
T 3h8l_A 81 IDAK-SS---MVYYTKPDGSMAEEEYDYVIVGIGAHLATE 116 (409)
T ss_dssp EETT-TT---EEEEECTTSCEEEEECSEEEECCCCEECGG
T ss_pred EeCC-CC---EEEEccCCcccceeeCCEEEECCCCCcCcc
Confidence 9843 22 35555664 399999999999998754
No 214
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.05 E-value=4.8e-06 Score=90.23 Aligned_cols=45 Identities=16% Similarity=0.195 Sum_probs=35.9
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCc---EEEeCCCeEEEeccEEeccCCCC
Q 012165 129 WYKEKGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCTA 174 (469)
Q Consensus 129 ~~~~~~i~~~~~~~v~~id~~~~---~v~~~~g~~~~yd~lVlAtG~~~ 174 (469)
.+++.|++++.+++|+++..++. .|.+.+| ++.+|+||+|+|...
T Consensus 160 ~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 160 RTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccch
Confidence 44677999999999999987544 3567666 699999999999753
No 215
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.05 E-value=5.8e-06 Score=78.76 Aligned_cols=96 Identities=16% Similarity=0.199 Sum_probs=71.0
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++|+|||+|+.|+.+|..|++.+. +|+++++.+.... .. .+ .....+.
T Consensus 144 ~~~~v~ViG~G~~g~e~A~~l~~~g~---~Vtlv~~~~~~~~-----~~-----------~~-----------~~~l~~~ 193 (320)
T 1trb_A 144 RNQKVAVIGGGNTAVEEALYLSNIAS---EVHLIHRRDGFRA-----EK-----------IL-----------IKRLMDK 193 (320)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSS---EEEEECSSSSCCC-----CH-----------HH-----------HHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCC---eEEEEEeCCcccc-----CH-----------HH-----------HHHHHHh
Confidence 35789999999999999999999876 8999987654210 00 00 0123345
Q ss_pred HHHCCcEEEeCCcEEEEeCCC-c--EEEeCC----C--eEEEeccEEeccCCCCC
Q 012165 130 YKEKGIEMIYQDPVTSIDIEK-Q--TLITNS----G--KLLKYGSLIVATGCTAS 175 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~-~--~v~~~~----g--~~~~yd~lVlAtG~~~~ 175 (469)
+++.++++++++++.+++.++ + .|++.+ | .++++|.+|+|+|.+|.
T Consensus 194 l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~ 248 (320)
T 1trb_A 194 VENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPN 248 (320)
T ss_dssp HHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEES
T ss_pred cccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCC
Confidence 667899999999999998765 2 255543 4 57999999999998875
No 216
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.05 E-value=6.1e-06 Score=83.53 Aligned_cols=99 Identities=15% Similarity=0.282 Sum_probs=73.5
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||+|+.|+.+|..|++.|. +|++++..+... +.+.. .+ .....+.
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~~~-----------~~-----------~~~l~~~ 230 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWARLGA---EVTVLEAMDKFL---PAVDE-----------QV-----------AKEAQKI 230 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSSS---TTSCH-----------HH-----------HHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC---cEEEEecCCCcC---cccCH-----------HH-----------HHHHHHH
Confidence 45799999999999999999999986 899999876421 00000 00 1223456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeCCC---eEEEeccEEeccCCCCCc
Q 012165 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSG---KLLKYGSLIVATGCTASR 176 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~~--~v~~~~g---~~~~yd~lVlAtG~~~~~ 176 (469)
+++.|++++.++++.+++.++. .+.+.++ +++++|.+|+|+|.+|..
T Consensus 231 l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~ 282 (476)
T 3lad_A 231 LTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVT 282 (476)
T ss_dssp HHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEECC
T ss_pred HHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccC
Confidence 7889999999999999986543 4555544 579999999999988753
No 217
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.03 E-value=6.6e-06 Score=83.61 Aligned_cols=101 Identities=19% Similarity=0.252 Sum_probs=72.7
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCC-CCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMA-DGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~-~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
.++++|||||+.|+.+|..|++.+.. ..+|+++++.+... . . .+ + ..+ .....+.
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~-~-----~-~l-~-----~~~-----------~~~~~~~ 235 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNM-G-----K-IL-P-----EYL-----------SNWTMEK 235 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTT-T-----T-TS-C-----HHH-----------HHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccc-c-----c-cC-C-----HHH-----------HHHHHHH
Confidence 57899999999999999999874210 23799998764310 0 0 00 0 000 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeCCCeEEEeccEEeccCCCCC
Q 012165 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
+++.|++++.+++|..++.++. .|++.+|+++++|.||+|+|.+|.
T Consensus 236 l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 236 VRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPN 283 (493)
T ss_dssp HHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEEC
T ss_pred HHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCcc
Confidence 7889999999999999975443 577889999999999999998875
No 218
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.02 E-value=1.6e-05 Score=75.34 Aligned_cols=82 Identities=21% Similarity=0.302 Sum_probs=66.2
Q ss_pred eEEEEcCChHHHHHHHHHHhCCCeEe--------------------------------eeHHHHHHcCcEEEcCCeEEEE
Q 012165 209 KVVVVGGGYIGMEVAAAAVGWKLDTT--------------------------------RYEQLYQQNGVKFVKGASIKNL 256 (469)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g~~v~--------------------------------~~~~~l~~~gV~~~~~~~v~~i 256 (469)
+|+|||+|+.|+.+|..|++.|.++. .+.+.+++.|++++.++++..+
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i 82 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKL 82 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEE
Confidence 68999999999999999999988775 2335566789999999999999
Q ss_pred EeCCC-CcEEEEEcCCCCEEeCCEEEEccCCccCC
Q 012165 257 EAGSD-GRVAAVKLEDGSTIDADTIVIGIGAKPTV 290 (469)
Q Consensus 257 ~~~~~-~~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 290 (469)
+...+ +....+.+++|+++.+|.+|+|+|.+|..
T Consensus 83 ~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~ 117 (310)
T 1fl2_A 83 IPAAVEGGLHQIETASGAVLKARSIIVATGAKWRN 117 (310)
T ss_dssp ECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EecccCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 75322 22335778888899999999999998764
No 219
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.00 E-value=8.2e-06 Score=77.76 Aligned_cols=91 Identities=20% Similarity=0.256 Sum_probs=69.8
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (469)
.++++|||+|+.|+..|..|++.+. +|+++++.+.+.. . ....+.+
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~---~V~~i~~~~~~~~-----~--------------------------~~l~~~l 200 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVK---NVTIIEYMPKYMC-----E--------------------------NAYVQEI 200 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBS---EEEEECSSSSCCS-----C--------------------------HHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCC---cEEEEEcCCccCC-----C--------------------------HHHHHHH
Confidence 4789999999999999999998875 8999987653210 0 0123456
Q ss_pred HHCCcEEEeCCcEEEEeCCCc---EEEeC---CCe--EEEeccEEeccCCCCC
Q 012165 131 KEKGIEMIYQDPVTSIDIEKQ---TLITN---SGK--LLKYGSLIVATGCTAS 175 (469)
Q Consensus 131 ~~~~i~~~~~~~v~~id~~~~---~v~~~---~g~--~~~yd~lVlAtG~~~~ 175 (469)
.+.|++++.++++.+++.++. .+.+. +|+ ++.+|.||+|+|..|.
T Consensus 201 ~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 253 (319)
T 3cty_A 201 KKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQ 253 (319)
T ss_dssp HHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEEC
T ss_pred hcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCccC
Confidence 688999999999999987643 45554 564 6899999999998765
No 220
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.00 E-value=1.6e-05 Score=75.93 Aligned_cols=82 Identities=16% Similarity=0.253 Sum_probs=66.7
Q ss_pred CeEEEEcCChHHHHHHHHHHhCCCeEe-------------------------------------eeHHHHHHcCcEEEcC
Q 012165 208 KKVVVVGGGYIGMEVAAAAVGWKLDTT-------------------------------------RYEQLYQQNGVKFVKG 250 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~v~-------------------------------------~~~~~l~~~gV~~~~~ 250 (469)
.+|+|||+|+.|+.+|..|++.|.+++ .+.+.+++.|++++++
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICLE 87 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEcc
Confidence 589999999999999999999998877 1234556679999999
Q ss_pred CeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCC---ccCCc
Q 012165 251 ASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA---KPTVS 291 (469)
Q Consensus 251 ~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~---~p~~~ 291 (469)
++|.+++..+++. ..+.+.+|+ +.+|.||+|+|. .|...
T Consensus 88 ~~v~~i~~~~~~~-~~v~~~~g~-~~~d~vVlAtG~~~~~p~~~ 129 (332)
T 3lzw_A 88 QAVESVEKQADGV-FKLVTNEET-HYSKTVIITAGNGAFKPRKL 129 (332)
T ss_dssp CCEEEEEECTTSC-EEEEESSEE-EEEEEEEECCTTSCCEECCC
T ss_pred CEEEEEEECCCCc-EEEEECCCE-EEeCEEEECCCCCcCCCCCC
Confidence 9999998754433 357788885 999999999999 77543
No 221
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.00 E-value=5.8e-06 Score=79.33 Aligned_cols=96 Identities=13% Similarity=0.234 Sum_probs=71.7
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++|+|||+|..|+.+|..|++.+. +|+++++.+.+... . .. .....+.
T Consensus 151 ~~~~v~viG~G~~g~e~a~~l~~~g~---~V~~v~~~~~~~~~------------~----~~-----------~~~l~~~ 200 (335)
T 2zbw_A 151 QGKRVLIVGGGDSAVDWALNLLDTAR---RITLIHRRPQFRAH------------E----AS-----------VKELMKA 200 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHTTTTSS---EEEEECSSSSCCSC------------H----HH-----------HHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhCC---EEEEEEcCCccCcc------------H----HH-----------HHHHHhc
Confidence 35799999999999999999998875 79999877542100 0 00 0123445
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeC---CC--eEEEeccEEeccCCCCC
Q 012165 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITN---SG--KLLKYGSLIVATGCTAS 175 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~~--~v~~~---~g--~~~~yd~lVlAtG~~~~ 175 (469)
+++.+++++.++++..++.+++ .|++. +| .++++|.+|+|+|.+|.
T Consensus 201 l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 253 (335)
T 2zbw_A 201 HEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYITK 253 (335)
T ss_dssp HHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEEE
T ss_pred cccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCCCC
Confidence 6667999999989999987654 56665 66 57999999999998764
No 222
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.00 E-value=9.1e-06 Score=82.56 Aligned_cols=98 Identities=17% Similarity=0.248 Sum_probs=72.2
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||||+.|+.+|..|++.|. +|++++..+... +.+. ..+ .....+.
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~d-----------~~~-----------~~~l~~~ 248 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWARLGA---KVTVVEFLDTIL---GGMD-----------GEV-----------AKQLQRM 248 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTC---EEEEECSSSSSS---SSSC-----------HHH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCC---EEEEEecccccc---ccCC-----------HHH-----------HHHHHHH
Confidence 45799999999999999999999986 899998766421 0000 000 1123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeCC---C--eEEEeccEEeccCCCCC
Q 012165 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNS---G--KLLKYGSLIVATGCTAS 175 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~~--~v~~~~---g--~~~~yd~lVlAtG~~~~ 175 (469)
+++.|++++.++++.++..++. .+.+.+ | +++++|.||+|+|.+|.
T Consensus 249 l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~ 301 (491)
T 3urh_A 249 LTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPS 301 (491)
T ss_dssp HHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEEC
T ss_pred HHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccC
Confidence 7888999999999999876554 344442 4 57999999999998875
No 223
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.99 E-value=5.9e-06 Score=83.80 Aligned_cols=97 Identities=13% Similarity=0.169 Sum_probs=70.6
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||||+.|+.+|..|++.|. +|+++++....+ .+.. .+ .....+.
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~l~----~~d~-----------~~-----------~~~l~~~ 236 (483)
T 3dgh_A 186 EPGKTLVVGAGYIGLECAGFLKGLGY---EPTVMVRSIVLR----GFDQ-----------QM-----------AELVAAS 236 (483)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSCSST----TSCH-----------HH-----------HHHHHHH
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCC---EEEEEeCCCCCc----ccCH-----------HH-----------HHHHHHH
Confidence 35789999999999999999999986 899998642211 0000 00 1123466
Q ss_pred HHHCCcEEEeCCcEEEEeCCC---cEEEeCCCe-----EEEeccEEeccCCCCC
Q 012165 130 YKEKGIEMIYQDPVTSIDIEK---QTLITNSGK-----LLKYGSLIVATGCTAS 175 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~---~~v~~~~g~-----~~~yd~lVlAtG~~~~ 175 (469)
+++.|++++.++.+.+++... ..|++.++. ++++|.||+|+|.+|.
T Consensus 237 l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~ 290 (483)
T 3dgh_A 237 MEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGL 290 (483)
T ss_dssp HHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEEC
T ss_pred HHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccC
Confidence 788999999999999987632 246665543 7899999999998775
No 224
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.99 E-value=6.5e-06 Score=83.38 Aligned_cols=99 Identities=16% Similarity=0.190 Sum_probs=72.4
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||||+.|+.+|..|++.|. +|++++..+... +.+.. .+ .....+.
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~d~-----------~~-----------~~~~~~~ 237 (478)
T 3dk9_A 186 LPGRSVIVGAGYIAVEMAGILSALGS---KTSLMIRHDKVL---RSFDS-----------MI-----------STNCTEE 237 (478)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSC---TTSCH-----------HH-----------HHHHHHH
T ss_pred cCccEEEECCCHHHHHHHHHHHHcCC---eEEEEEeCCccc---cccCH-----------HH-----------HHHHHHH
Confidence 35799999999999999999999986 799999765421 10000 00 1123466
Q ss_pred HHHCCcEEEeCCcEEEEeCCC----cEEEeCC-------CeEEEeccEEeccCCCCCc
Q 012165 130 YKEKGIEMIYQDPVTSIDIEK----QTLITNS-------GKLLKYGSLIVATGCTASR 176 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~----~~v~~~~-------g~~~~yd~lVlAtG~~~~~ 176 (469)
+++.|++++.++.+.+++... ..+.+.+ |.++++|.||+|+|.+|..
T Consensus 238 l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~ 295 (478)
T 3dk9_A 238 LENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNT 295 (478)
T ss_dssp HHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESC
T ss_pred HHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCC
Confidence 788999999999999987542 2455654 2679999999999987753
No 225
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.99 E-value=1.6e-05 Score=78.96 Aligned_cols=81 Identities=17% Similarity=0.211 Sum_probs=67.6
Q ss_pred CeEEEEcCChHHHHHHHHHHhCCCeEe-----------------------------------------------------
Q 012165 208 KKVVVVGGGYIGMEVAAAAVGWKLDTT----------------------------------------------------- 234 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~v~----------------------------------------------------- 234 (469)
.+|+|||||+.|+-+|..|++.|.+|+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEIA 85 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCeeE
Confidence 479999999999999999999998876
Q ss_pred -------------------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCC--EEeCCEEEEccCCc
Q 012165 235 -------------------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS--TIDADTIVIGIGAK 287 (469)
Q Consensus 235 -------------------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~--~i~~D~vi~a~G~~ 287 (469)
.+.+.+++.|++++.+++|++++..+++....+.+.+|+ ++.+|.||.|+|..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~ 165 (421)
T 3nix_A 86 DFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYG 165 (421)
T ss_dssp EEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGG
T ss_pred EEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCc
Confidence 133455567999999999999987655555567778887 79999999999987
Q ss_pred c
Q 012165 288 P 288 (469)
Q Consensus 288 p 288 (469)
.
T Consensus 166 s 166 (421)
T 3nix_A 166 R 166 (421)
T ss_dssp C
T ss_pred h
Confidence 6
No 226
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.98 E-value=6.7e-05 Score=77.10 Aligned_cols=85 Identities=18% Similarity=0.257 Sum_probs=68.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhCCCeEe----------------------------------------------------
Q 012165 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTT---------------------------------------------------- 234 (469)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~v~---------------------------------------------------- 234 (469)
..+|+|||+|+.|+.+|..|.+.|.+++
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~e 100 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPE 100 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHH
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHH
Confidence 3589999999999999999999988776
Q ss_pred ---eeHHHHHHcCc--EEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccC--CccCCc
Q 012165 235 ---RYEQLYQQNGV--KFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIG--AKPTVS 291 (469)
Q Consensus 235 ---~~~~~l~~~gV--~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G--~~p~~~ 291 (469)
.+.+..++.|+ +++++++|++++.+++.....|.+++|+++.+|.||+|+| .+|...
T Consensus 101 i~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p 164 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTP 164 (549)
T ss_dssp HHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCCC
T ss_pred HHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCCC
Confidence 11234566787 7899999999987655545578889999999999999999 556543
No 227
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.98 E-value=1.5e-05 Score=74.83 Aligned_cols=81 Identities=15% Similarity=0.353 Sum_probs=64.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhCCCeEe-------------------------------eeHHHHHHc-CcEEEcCCeEEE
Q 012165 208 KKVVVVGGGYIGMEVAAAAVGWKLDTT-------------------------------RYEQLYQQN-GVKFVKGASIKN 255 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~v~-------------------------------~~~~~l~~~-gV~~~~~~~v~~ 255 (469)
.+|+|||+|+.|+.+|..|++.|.+++ .+.+.+++. +++++.+ +++.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~ 81 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEG-RVTD 81 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEES-CEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEe-EEEE
Confidence 479999999999999999999998886 233444454 7888765 7999
Q ss_pred EEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCc
Q 012165 256 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 291 (469)
Q Consensus 256 i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 291 (469)
++..+++ ..+.+.+|+++.+|.+|+|+|.+|...
T Consensus 82 i~~~~~~--~~v~~~~g~~~~~d~vviAtG~~~~~~ 115 (297)
T 3fbs_A 82 AKGSFGE--FIVEIDGGRRETAGRLILAMGVTDELP 115 (297)
T ss_dssp EEEETTE--EEEEETTSCEEEEEEEEECCCCEEECC
T ss_pred EEEcCCe--EEEEECCCCEEEcCEEEECCCCCCCCC
Confidence 9865333 357888998999999999999987643
No 228
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.98 E-value=8.7e-06 Score=77.82 Aligned_cols=91 Identities=13% Similarity=0.252 Sum_probs=68.4
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (469)
.++++|||+|..|+.+|..|++.+. +|+++++.+.+.. . ....+.+
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~---~Vtlv~~~~~~~~-----~--------------------------~~~~~~l 197 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFAD---EVTVIHRRDTLRA-----N--------------------------KVAQARA 197 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCS---EEEEECSSSSCCS-----C--------------------------HHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCC---EEEEEeCCCcCCc-----c--------------------------hHHHHHH
Confidence 4789999999999999999998875 8999987654210 0 0112223
Q ss_pred -HHCCcEEEeCCcEEEEeCCCc--EEEeC---CCe--EEEeccEEeccCCCCC
Q 012165 131 -KEKGIEMIYQDPVTSIDIEKQ--TLITN---SGK--LLKYGSLIVATGCTAS 175 (469)
Q Consensus 131 -~~~~i~~~~~~~v~~id~~~~--~v~~~---~g~--~~~yd~lVlAtG~~~~ 175 (469)
++.+++++.++++..++.+++ .|.+. +|+ ++++|.||+|+|.+|.
T Consensus 198 ~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 250 (325)
T 2q7v_A 198 FANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPN 250 (325)
T ss_dssp HTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCEEES
T ss_pred HhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCC
Confidence 346999999999999987643 45554 564 6899999999998775
No 229
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.97 E-value=1.6e-05 Score=79.28 Aligned_cols=79 Identities=27% Similarity=0.427 Sum_probs=65.8
Q ss_pred CeEEEEcCChHHHHHHHHHHh--CCCeEe-----------------------------eeHHHHHHcCcEEEcCCeEEEE
Q 012165 208 KKVVVVGGGYIGMEVAAAAVG--WKLDTT-----------------------------RYEQLYQQNGVKFVKGASIKNL 256 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~--~g~~v~-----------------------------~~~~~l~~~gV~~~~~~~v~~i 256 (469)
++|+|||+|+.|+.+|..|++ .+.+|+ .+.+.+++.||+++.+ .++.+
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~i 81 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEE-EEEEE
Confidence 689999999999999999999 677887 3456677889999975 89999
Q ss_pred EeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCc
Q 012165 257 EAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 291 (469)
Q Consensus 257 ~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 291 (469)
+.+ .. .|.+++|+++.+|.+|+|+|.+|+.+
T Consensus 82 d~~--~~--~v~~~~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 82 DPD--AN--TVTTQSGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp ETT--TT--EEEETTCCEEECSEEEECCCCEEECC
T ss_pred ECC--CC--EEEECCCcEEECCEEEEcCCcccccC
Confidence 853 22 46788998999999999999998754
No 230
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=97.97 E-value=3.9e-05 Score=75.04 Aligned_cols=79 Identities=24% Similarity=0.342 Sum_probs=61.7
Q ss_pred eEEEEcCChHHHHHHHHHHhCCCeEe------------------------------------------------------
Q 012165 209 KVVVVGGGYIGMEVAAAAVGWKLDTT------------------------------------------------------ 234 (469)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g~~v~------------------------------------------------------ 234 (469)
.|+|||+|+.|+-+|..|++.|.+|.
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPII 85 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceEee
Confidence 58999999999999999999998886
Q ss_pred ---------------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcC-CC--CEEeCCEEEEccCCcc
Q 012165 235 ---------------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE-DG--STIDADTIVIGIGAKP 288 (469)
Q Consensus 235 ---------------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~-~g--~~i~~D~vi~a~G~~p 288 (469)
.+.+..++.|++++.++.+..+..+ ++.+..+... ++ .++.+|+||-|.|...
T Consensus 86 ~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~-~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 86 LQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred ccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeec-cceeeeeeecccccceEEEEeEEEeCCcccc
Confidence 3345566789999999999998754 4554444432 33 3688999999999653
No 231
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.97 E-value=1.1e-05 Score=77.19 Aligned_cols=92 Identities=17% Similarity=0.287 Sum_probs=69.9
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||+|+.|+.+|..|++.+. +|+++++.+.... . ....+.
T Consensus 172 ~~~~v~vvG~G~~g~e~a~~l~~~g~---~v~~v~~~~~~~~-----------------~--------------~~~~~~ 217 (338)
T 3itj_A 172 RNKPLAVIGGGDSACEEAQFLTKYGS---KVFMLVRKDHLRA-----------------S--------------TIMQKR 217 (338)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSS---EEEEECSSSSCCS-----------------C--------------HHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCC---EEEEEEcCCccCC-----------------C--------------HHHHHH
Confidence 45789999999999999999999875 7999987654210 0 112344
Q ss_pred HHHC-CcEEEeCCcEEEEeCCCc---EEEeCC-----CeEEEeccEEeccCCCCC
Q 012165 130 YKEK-GIEMIYQDPVTSIDIEKQ---TLITNS-----GKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 130 ~~~~-~i~~~~~~~v~~id~~~~---~v~~~~-----g~~~~yd~lVlAtG~~~~ 175 (469)
+.+. |++++.++.+..++.++. .|++.+ +.++++|.+|+|+|..|.
T Consensus 218 l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 272 (338)
T 3itj_A 218 AEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPA 272 (338)
T ss_dssp HHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEEEC
T ss_pred HHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCC
Confidence 4454 999999999999987664 355554 457999999999998775
No 232
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.96 E-value=1.1e-05 Score=81.88 Aligned_cols=97 Identities=12% Similarity=0.157 Sum_probs=69.6
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||||+.|+.+|..|++.|. +|+++++.... +.+.. .+ .....+.
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~l----~~~d~-----------~~-----------~~~l~~~ 234 (488)
T 3dgz_A 184 SPGKTLVVGASYVALECAGFLTGIGL---DTTVMMRSIPL----RGFDQ-----------QM-----------SSLVTEH 234 (488)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCSS----TTSCH-----------HH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCC---ceEEEEcCccc----ccCCH-----------HH-----------HHHHHHH
Confidence 35689999999999999999999986 79999865321 10000 00 1123566
Q ss_pred HHHCCcEEEeCCcEEEEeCC-C--cEEEeCC---Ce--EEEeccEEeccCCCCC
Q 012165 130 YKEKGIEMIYQDPVTSIDIE-K--QTLITNS---GK--LLKYGSLIVATGCTAS 175 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~-~--~~v~~~~---g~--~~~yd~lVlAtG~~~~ 175 (469)
+++.|++++.++.+..+... + ..+++.+ |+ ++++|.||+|+|.+|.
T Consensus 235 l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~ 288 (488)
T 3dgz_A 235 MESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPE 288 (488)
T ss_dssp HHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEES
T ss_pred HHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcc
Confidence 78899999999888888652 2 2455543 54 4789999999998775
No 233
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.96 E-value=9.3e-06 Score=81.51 Aligned_cols=98 Identities=19% Similarity=0.271 Sum_probs=70.9
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||||+.|+.+|..|++.|. +|+++++.+... +. .+ + ..+ .....+.
T Consensus 147 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l---~~----~~---~---~~~-----------~~~l~~~ 199 (449)
T 3kd9_A 147 KVENVVIIGGGYIGIEMAEAFAAQGK---NVTMIVRGERVL---RR----SF---D---KEV-----------TDILEEK 199 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSTT---TT----TS---C---HHH-----------HHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCC---eEEEEEcCCccc---hh----hc---C---HHH-----------HHHHHHH
Confidence 45799999999999999999999986 899999876421 00 00 0 000 0123445
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc-EEEeCCCeEEEeccEEeccCCCCC
Q 012165 130 YKEKGIEMIYQDPVTSIDIEKQ-TLITNSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~~-~v~~~~g~~~~yd~lVlAtG~~~~ 175 (469)
+++. ++++.++.+..++.+++ .....++.++++|.||+|+|.+|.
T Consensus 200 l~~~-v~i~~~~~v~~i~~~~~v~~v~~~g~~i~~D~Vv~a~G~~p~ 245 (449)
T 3kd9_A 200 LKKH-VNLRLQEITMKIEGEERVEKVVTDAGEYKAELVILATGIKPN 245 (449)
T ss_dssp HTTT-SEEEESCCEEEEECSSSCCEEEETTEEEECSEEEECSCEEEC
T ss_pred HHhC-cEEEeCCeEEEEeccCcEEEEEeCCCEEECCEEEEeeCCccC
Confidence 6667 99999999999987653 233456778999999999998765
No 234
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.95 E-value=1.1e-05 Score=76.34 Aligned_cols=93 Identities=17% Similarity=0.234 Sum_probs=70.5
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||+|+.|+.+|..|++.+. +|+++++.+.+... . ......
T Consensus 146 ~~~~v~viG~g~~~~e~a~~l~~~g~---~v~~~~~~~~~~~~----------------~--------------~~~~~~ 192 (315)
T 3r9u_A 146 KNKEVAVLGGGDTALEEALYLANICS---KIYLIHRRDEFRAA----------------P--------------STVEKV 192 (315)
T ss_dssp TTSEEEEECCBHHHHHHHHHHHTTSS---EEEEECSSSSCBSC----------------H--------------HHHHHH
T ss_pred CcCEEEEECCCHHHHHHHHHHHhhCC---EEEEEEeCCCCCCC----------------H--------------HHHHHH
Confidence 35789999999999999999999875 79999876542100 0 012344
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc---EEEeC--CCe--EEEeccEEeccCCCCC
Q 012165 130 YKEKGIEMIYQDPVTSIDIEKQ---TLITN--SGK--LLKYGSLIVATGCTAS 175 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~~---~v~~~--~g~--~~~yd~lVlAtG~~~~ 175 (469)
+++.|++++.++.+.+++.++. .|++. +|+ ++++|.+|+|+|..|.
T Consensus 193 ~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~ 245 (315)
T 3r9u_A 193 KKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVR 245 (315)
T ss_dssp HHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCEEEC
T ss_pred HhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCCCC
Confidence 5678999999999999987662 34444 775 7999999999998775
No 235
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.95 E-value=1.9e-05 Score=75.89 Aligned_cols=92 Identities=16% Similarity=0.265 Sum_probs=69.8
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCH-h
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP-E 128 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 128 (469)
..++|+|||+|..|+.+|..|++.+. +|+++++.+.+.. . .... .
T Consensus 154 ~~~~v~ViG~G~~g~e~a~~l~~~g~---~V~l~~~~~~~~~-----------------~--------------~~~~~~ 199 (335)
T 2a87_A 154 RDQDIAVIGGGDSAMEEATFLTRFAR---SVTLVHRRDEFRA-----------------S--------------KIMLDR 199 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHHTTTCS---EEEEECSSSSCSS-----------------C--------------TTHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCC---eEEEEEcCCcCCc-----------------c--------------HHHHHH
Confidence 35799999999999999999998875 8999987653210 0 0112 3
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCc--EEEeC---CC--eEEEeccEEeccCCCCC
Q 012165 129 WYKEKGIEMIYQDPVTSIDIEKQ--TLITN---SG--KLLKYGSLIVATGCTAS 175 (469)
Q Consensus 129 ~~~~~~i~~~~~~~v~~id~~~~--~v~~~---~g--~~~~yd~lVlAtG~~~~ 175 (469)
.+++.+|+++.++++.+++.+++ .+.+. +| +++++|.||+|+|.+|.
T Consensus 200 ~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 253 (335)
T 2a87_A 200 ARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPR 253 (335)
T ss_dssp HHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCEEEC
T ss_pred HhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCCccC
Confidence 45678999999999999987653 35543 34 57999999999998875
No 236
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.95 E-value=1.4e-05 Score=75.75 Aligned_cols=92 Identities=18% Similarity=0.232 Sum_probs=68.6
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++|+|||+|+.|+.+|..|++.|. +|+++++.+.+.. . ....+.
T Consensus 142 ~~~~v~VvG~G~~g~e~A~~l~~~g~---~Vtlv~~~~~~~~-----~--------------------------~~~~~~ 187 (311)
T 2q0l_A 142 KNKEVAVLGGGDTAVEEAIYLANICK---KVYLIHRRDGFRC-----A--------------------------PITLEH 187 (311)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHTTSS---EEEEECSSSSCCS-----C--------------------------HHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCC---EEEEEeeCCccCC-----C--------------------------HHHHHH
Confidence 35799999999999999999999875 8999987654210 0 011233
Q ss_pred HH-HCCcEEEeCCcEEEEeCC-Cc--EEEeC---CCe--EEEeccEEeccCCCCC
Q 012165 130 YK-EKGIEMIYQDPVTSIDIE-KQ--TLITN---SGK--LLKYGSLIVATGCTAS 175 (469)
Q Consensus 130 ~~-~~~i~~~~~~~v~~id~~-~~--~v~~~---~g~--~~~yd~lVlAtG~~~~ 175 (469)
+. +.+++++.++.+.+++.+ ++ .|.+. +|+ ++++|.||+|+|..|.
T Consensus 188 l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 242 (311)
T 2q0l_A 188 AKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVN 242 (311)
T ss_dssp HHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEEC
T ss_pred HhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCccC
Confidence 33 479999999899999865 32 35554 565 6899999999998875
No 237
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.91 E-value=1.5e-05 Score=76.45 Aligned_cols=92 Identities=20% Similarity=0.307 Sum_probs=69.5
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCC-Hh
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQT-PE 128 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 128 (469)
..++|+|||+|..|+.+|..|++.+. +|+++++.+.+.. + ... .+
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~---~V~lv~~~~~~~~-----~--------------------------~~~~~~ 203 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGS---KVYIIHRRDAFRA-----S--------------------------KIMQQR 203 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSS---EEEEECSSSSCCS-----C--------------------------HHHHHH
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCC---eEEEEecCCcCCc-----c--------------------------HHHHHH
Confidence 45789999999999999999998875 8999987754210 0 011 13
Q ss_pred HHHHCCcEEEeCCcEEEEeCCC---c--EEEeC---CC--eEEEeccEEeccCCCCC
Q 012165 129 WYKEKGIEMIYQDPVTSIDIEK---Q--TLITN---SG--KLLKYGSLIVATGCTAS 175 (469)
Q Consensus 129 ~~~~~~i~~~~~~~v~~id~~~---~--~v~~~---~g--~~~~yd~lVlAtG~~~~ 175 (469)
.+++.+++++.++++..++.+. + .|.+. +| .++++|.||+|+|.+|.
T Consensus 204 ~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 260 (333)
T 1vdc_A 204 ALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPA 260 (333)
T ss_dssp HHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEES
T ss_pred HHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccc
Confidence 3456899999999999998765 2 25554 34 57999999999998875
No 238
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.91 E-value=5.3e-05 Score=73.45 Aligned_cols=80 Identities=14% Similarity=0.231 Sum_probs=65.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhCCCeEe-------------------------------------eeHHHHHHcCcEEEc
Q 012165 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTT-------------------------------------RYEQLYQQNGVKFVK 249 (469)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~v~-------------------------------------~~~~~l~~~gV~~~~ 249 (469)
..+|+|||+|+.|+.+|..|++.|.+++ .+.+.+++.|++++.
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 93 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVL 93 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEEc
Confidence 4689999999999999999999888776 123445667999999
Q ss_pred CCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCc
Q 012165 250 GASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 287 (469)
Q Consensus 250 ~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~ 287 (469)
++.|+.++..+++.. .|.+.+|+++.+|.||+|+|..
T Consensus 94 ~~~v~~i~~~~~~~~-~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 94 NETVTKYTKLDDGTF-ETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp SCCEEEEEECTTSCE-EEEETTSCEEEEEEEEECCTTC
T ss_pred CCEEEEEEECCCceE-EEEECCCcEEEeeEEEEccCCC
Confidence 999999986544333 5788889899999999999994
No 239
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=97.90 E-value=3e-05 Score=76.81 Aligned_cols=81 Identities=26% Similarity=0.338 Sum_probs=65.6
Q ss_pred cCCeEEEEcCChHHHHHHHHHHhCCCeEe---------------------------------------------------
Q 012165 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTT--------------------------------------------------- 234 (469)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~v~--------------------------------------------------- 234 (469)
...+|+|||+|+.|+.+|..|++.|.+|+
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 105 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQD 105 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHH
Confidence 34689999999999999999999998876
Q ss_pred -------------------------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEc
Q 012165 235 -------------------------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIG 283 (469)
Q Consensus 235 -------------------------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a 283 (469)
.+.+.+++.||+++++++|+++..+++ . ..|.+.+| ++.+|.||+|
T Consensus 106 ~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~-~-~~V~~~~g-~i~ad~VIlA 182 (417)
T 3v76_A 106 FVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTAS-G-FRVTTSAG-TVDAASLVVA 182 (417)
T ss_dssp HHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETT-E-EEEEETTE-EEEESEEEEC
T ss_pred HHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCC-E-EEEEECCc-EEEeeEEEEC
Confidence 123445677999999999999986533 3 35788888 8999999999
Q ss_pred cCCccC
Q 012165 284 IGAKPT 289 (469)
Q Consensus 284 ~G~~p~ 289 (469)
+|..+.
T Consensus 183 tG~~S~ 188 (417)
T 3v76_A 183 SGGKSI 188 (417)
T ss_dssp CCCSSC
T ss_pred CCCccC
Confidence 998763
No 240
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.90 E-value=1.7e-05 Score=82.33 Aligned_cols=35 Identities=26% Similarity=0.293 Sum_probs=31.9
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (469)
.+||||||||+||++||..|++.|. +|+|+|+.+.
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~---~V~vlEK~~~ 41 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQ---TCALLSKVFP 41 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC---cEEEEecCCC
Confidence 4799999999999999999999987 7999999753
No 241
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.89 E-value=3.6e-05 Score=73.10 Aligned_cols=81 Identities=21% Similarity=0.313 Sum_probs=66.1
Q ss_pred CeEEEEcCChHHHHHHHHHHhCCCeEe--------------------------------eeHHHHHHcCcEEEcCCeEEE
Q 012165 208 KKVVVVGGGYIGMEVAAAAVGWKLDTT--------------------------------RYEQLYQQNGVKFVKGASIKN 255 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~v~--------------------------------~~~~~l~~~gV~~~~~~~v~~ 255 (469)
.+|+|||+|+.|+.+|..|++.|.+++ .+.+.+++.|++++. ..+.+
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~ 94 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL-DIVEK 94 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE-SCEEE
T ss_pred cCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEE
Confidence 589999999999999999999988765 234566678999999 88999
Q ss_pred EEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCc
Q 012165 256 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 291 (469)
Q Consensus 256 i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 291 (469)
+...+ +. ..+.+.+|+++.+|.+|+|+|..|...
T Consensus 95 i~~~~-~~-~~v~~~~g~~~~~d~lvlAtG~~~~~~ 128 (323)
T 3f8d_A 95 IENRG-DE-FVVKTKRKGEFKADSVILGIGVKRRKL 128 (323)
T ss_dssp EEEC---C-EEEEESSSCEEEEEEEEECCCCEECCC
T ss_pred EEecC-CE-EEEEECCCCEEEcCEEEECcCCCCccC
Confidence 98643 33 257788888999999999999998654
No 242
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.88 E-value=1.8e-05 Score=82.39 Aligned_cols=34 Identities=32% Similarity=0.322 Sum_probs=31.5
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
.+||||||||+||++||..|++.|. +|+|+|+..
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~---~V~vlEK~~ 51 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGF---NTACVTKLF 51 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSC
T ss_pred cCCEEEECccHHHHHHHHHHHHCCC---cEEEEeccC
Confidence 4799999999999999999999987 799999975
No 243
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.85 E-value=0.00011 Score=75.44 Aligned_cols=83 Identities=19% Similarity=0.253 Sum_probs=67.2
Q ss_pred CeEEEEcCChHHHHHHHHHH-hCCCeEe----------------------------------------------------
Q 012165 208 KKVVVVGGGYIGMEVAAAAV-GWKLDTT---------------------------------------------------- 234 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~-~~g~~v~---------------------------------------------------- 234 (469)
.+|+|||+|+.|+.+|..|+ +.|.+++
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~e 88 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPE 88 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHHH
Confidence 47999999999999999999 8887776
Q ss_pred ---eeHHHHHHcCc--EEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCC--ccCC
Q 012165 235 ---RYEQLYQQNGV--KFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA--KPTV 290 (469)
Q Consensus 235 ---~~~~~l~~~gV--~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~--~p~~ 290 (469)
.+.+..++.|+ .++++++|++++.++++....|.+++|+++.+|.||+|+|. +|..
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~ 151 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINF 151 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCC
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCC
Confidence 12334566788 88999999999876554455788899999999999999994 5553
No 244
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.83 E-value=1.5e-05 Score=81.10 Aligned_cols=99 Identities=21% Similarity=0.305 Sum_probs=70.3
Q ss_pred CcEEEEcCcHHHHHHHHHHHHcCC-----------CCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCC
Q 012165 52 REFVIVGGGNAAGYAARTFVEHGM-----------ADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGS 120 (469)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~-----------~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 120 (469)
.+++|||||+.|+.+|..|++.+. .+.+|++||..+... |.++. .+
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il---~~~~~-----------~~--------- 274 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL---NMFEK-----------KL--------- 274 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS---TTSCH-----------HH---------
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc---cCCCH-----------HH---------
Confidence 369999999999999998876431 124799999876531 11111 00
Q ss_pred CCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEE--eCCC----eEEEeccEEeccCCCCC
Q 012165 121 GGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLI--TNSG----KLLKYGSLIVATGCTAS 175 (469)
Q Consensus 121 ~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~--~~~g----~~~~yd~lVlAtG~~~~ 175 (469)
.....+.+++.||+++++++|.+++.+...+. ..+| +++++|.+|+|+|..|.
T Consensus 275 --~~~~~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~ 333 (502)
T 4g6h_A 275 --SSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKAR 333 (502)
T ss_dssp --HHHHHHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECC
T ss_pred --HHHHHHHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCC
Confidence 12345678899999999999999987665443 3455 36999999999997654
No 245
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.82 E-value=9.4e-06 Score=85.46 Aligned_cols=36 Identities=31% Similarity=0.443 Sum_probs=32.5
Q ss_pred CCcEEEEcCcHHHHHHHHHHHH-----cCCCCCcEEEEcCCCCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVE-----HGMADGRLCIVSKEAYA 89 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~-----~g~~~~~V~vie~~~~~ 89 (469)
++||+|||||++||++|..|++ .|+ +|+|||+.+..
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi---~v~viE~~~~~ 48 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDL---KVRIIDKRSTK 48 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTC---CEEEECSSSSC
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCC---CEEEEeCCCCC
Confidence 4799999999999999999999 887 79999987653
No 246
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.81 E-value=5.4e-05 Score=77.38 Aligned_cols=84 Identities=23% Similarity=0.317 Sum_probs=67.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHhCCCeEe--------------------------------eeHHHHHHcCcEEEcCCeEE
Q 012165 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTT--------------------------------RYEQLYQQNGVKFVKGASIK 254 (469)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~v~--------------------------------~~~~~l~~~gV~~~~~~~v~ 254 (469)
..+|+|||+|+.|+.+|..|++.|.++. .+.+.+++.|++++.++++.
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~ 291 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQSAS 291 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSCCEE
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCCEEE
Confidence 4579999999999999999999988775 23455677899999999999
Q ss_pred EEEeCCC-CcEEEEEcCCCCEEeCCEEEEccCCccCC
Q 012165 255 NLEAGSD-GRVAAVKLEDGSTIDADTIVIGIGAKPTV 290 (469)
Q Consensus 255 ~i~~~~~-~~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 290 (469)
.+....+ +....|.+++|+++.+|.+|+|+|.+|..
T Consensus 292 ~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~ 328 (521)
T 1hyu_A 292 KLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRN 328 (521)
T ss_dssp EEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCC
Confidence 9974321 22335788899899999999999988754
No 247
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.79 E-value=3.6e-05 Score=78.73 Aligned_cols=97 Identities=15% Similarity=0.230 Sum_probs=66.3
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||||+.|+.+|..|++.|. +|+++++.... +.+.. .+ .....+.
T Consensus 209 ~~~~vvVIGgG~ig~E~A~~l~~~G~---~Vtlv~~~~~l----~~~d~-----------~~-----------~~~~~~~ 259 (519)
T 3qfa_A 209 CPGKTLVVGASYVALECAGFLAGIGL---DVTVMVRSILL----RGFDQ-----------DM-----------ANKIGEH 259 (519)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCSS----TTSCH-----------HH-----------HHHHHHH
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCC---eEEEEeccccc----ccCCH-----------HH-----------HHHHHHH
Confidence 34679999999999999999999986 79999864211 10000 00 1123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCC----c--EEE--eCCC---eEEEeccEEeccCCCCC
Q 012165 130 YKEKGIEMIYQDPVTSIDIEK----Q--TLI--TNSG---KLLKYGSLIVATGCTAS 175 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~----~--~v~--~~~g---~~~~yd~lVlAtG~~~~ 175 (469)
+++.||+++.++++..+.... . .++ ..++ .++++|.|++|+|.+|.
T Consensus 260 l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~ 316 (519)
T 3qfa_A 260 MEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDAC 316 (519)
T ss_dssp HHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEES
T ss_pred HHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCccc
Confidence 788999999987766664321 2 232 2344 25789999999998875
No 248
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.79 E-value=6.1e-05 Score=71.20 Aligned_cols=81 Identities=12% Similarity=0.189 Sum_probs=58.6
Q ss_pred eEEEEcCChHHHHHHHHHHhCCCeEe-------------------------------eeHHHHHH-cCcEEEcCCeEEEE
Q 012165 209 KVVVVGGGYIGMEVAAAAVGWKLDTT-------------------------------RYEQLYQQ-NGVKFVKGASIKNL 256 (469)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g~~v~-------------------------------~~~~~l~~-~gV~~~~~~~v~~i 256 (469)
.|+|||+|+.|+.+|..+++.|.++. ...+.+.+ .++.++.. .+..+
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 86 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEK-TVVMI 86 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEEC-CEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEee-EEEEe
Confidence 69999999999999999999998876 01112223 34555544 45555
Q ss_pred EeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCc
Q 012165 257 EAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 291 (469)
Q Consensus 257 ~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 291 (469)
...+++.. .+.+.+|+++.+|.||+|||.+|...
T Consensus 87 ~~~~~~~~-~v~~~~g~~~~a~~liiATGs~p~~p 120 (304)
T 4fk1_A 87 TKQSTGLF-EIVTKDHTKYLAERVLLATGMQEEFP 120 (304)
T ss_dssp EECTTSCE-EEEETTCCEEEEEEEEECCCCEEECC
T ss_pred eecCCCcE-EEEECCCCEEEeCEEEEccCCccccc
Confidence 54444443 57889999999999999999987643
No 249
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.79 E-value=0.0001 Score=78.66 Aligned_cols=38 Identities=24% Similarity=0.453 Sum_probs=33.7
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~ 89 (469)
...+||+|||||++|+++|..|++.|+ +|+|+|+.+..
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~---~v~v~E~~~~~ 371 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGI---KVTVLEAKDRI 371 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTC---EEEEECSSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCC---cEEEEecccce
Confidence 446899999999999999999999987 79999987644
No 250
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.79 E-value=6.8e-05 Score=73.80 Aligned_cols=46 Identities=17% Similarity=0.206 Sum_probs=38.3
Q ss_pred cCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccC
Q 012165 243 NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 289 (469)
Q Consensus 243 ~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 289 (469)
.+..++++++++.++..+++.+ .++++||+++.+|+||-|-|....
T Consensus 122 ~~~~v~~~~~v~~~~~~~~~~v-~v~~~dG~~~~adlvVgADG~~S~ 167 (412)
T 4hb9_A 122 LANTIQWNKTFVRYEHIENGGI-KIFFADGSHENVDVLVGADGSNSK 167 (412)
T ss_dssp CTTTEECSCCEEEEEECTTSCE-EEEETTSCEEEESEEEECCCTTCH
T ss_pred ccceEEEEEEEEeeeEcCCCeE-EEEECCCCEEEeeEEEECCCCCcc
Confidence 3556888999999987666665 689999999999999999998653
No 251
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.78 E-value=2.4e-05 Score=78.95 Aligned_cols=96 Identities=21% Similarity=0.238 Sum_probs=68.5
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||||+.|+.+|..|++.|. +|++++..+... +.. + . ....+.
T Consensus 171 ~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~----~---d------------------~~~~~~ 219 (466)
T 3l8k_A 171 LPQDMVIIGAGYIGLEIASIFRLMGV---QTHIIEMLDRAL---ITL----E---D------------------QDIVNT 219 (466)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSC---TTS----C---C------------------HHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC---EEEEEEeCCcCC---CCC----C---C------------------HHHHHH
Confidence 35799999999999999999999986 899999765421 000 0 0 011111
Q ss_pred H-HHCCcEEEeCCcEEEEeCCC---cEEEeC--CCe--EEEeccEEeccCCCCCc
Q 012165 130 Y-KEKGIEMIYQDPVTSIDIEK---QTLITN--SGK--LLKYGSLIVATGCTASR 176 (469)
Q Consensus 130 ~-~~~~i~~~~~~~v~~id~~~---~~v~~~--~g~--~~~yd~lVlAtG~~~~~ 176 (469)
+ +...++++.++++.+++.++ ..+.+. +|+ ++++|.+|+|+|.+|..
T Consensus 220 l~~~l~v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~ 274 (466)
T 3l8k_A 220 LLSILKLNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVI 274 (466)
T ss_dssp HHHHHCCCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEEECC
T ss_pred HHhcCEEEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCCccc
Confidence 2 22349999999999997743 346666 565 79999999999988763
No 252
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.78 E-value=8.4e-05 Score=73.12 Aligned_cols=81 Identities=16% Similarity=0.139 Sum_probs=65.2
Q ss_pred CeEEEEcCChHHHHHHHHHHhCCCeEe-----------------------------------------------------
Q 012165 208 KKVVVVGGGYIGMEVAAAAVGWKLDTT----------------------------------------------------- 234 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~v~----------------------------------------------------- 234 (469)
.+|+|||+|+.|+.+|..|++.|.+|+
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~~ 86 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGEL 86 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCCE
Confidence 479999999999999999999988876
Q ss_pred -------------------------eeHHHHHHc-CcEEEcCCeEEEEEeCCCCcEE-EEEcCCCCEEeCCEEEEccCCc
Q 012165 235 -------------------------RYEQLYQQN-GVKFVKGASIKNLEAGSDGRVA-AVKLEDGSTIDADTIVIGIGAK 287 (469)
Q Consensus 235 -------------------------~~~~~l~~~-gV~~~~~~~v~~i~~~~~~~v~-~v~~~~g~~i~~D~vi~a~G~~ 287 (469)
.+.+.+++. |++++.++++++++.++++ +. .|++.+|+++.+|.||.|.|..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~-v~g~v~~~~g~~~~ad~vV~AdG~~ 165 (399)
T 2x3n_A 87 LRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERH-AIDQVRLNDGRVLRPRVVVGADGIA 165 (399)
T ss_dssp EEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTS-CEEEEEETTSCEEEEEEEEECCCTT
T ss_pred EEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCc-eEEEEEECCCCEEECCEEEECCCCC
Confidence 112233344 8999999999999875443 32 5788899899999999999987
Q ss_pred cC
Q 012165 288 PT 289 (469)
Q Consensus 288 p~ 289 (469)
..
T Consensus 166 s~ 167 (399)
T 2x3n_A 166 SY 167 (399)
T ss_dssp CH
T ss_pred hH
Confidence 64
No 253
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.77 E-value=0.00011 Score=71.67 Aligned_cols=78 Identities=23% Similarity=0.328 Sum_probs=65.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHhCCCeEe----------------------------------------------------
Q 012165 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTT---------------------------------------------------- 234 (469)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~v~---------------------------------------------------- 234 (469)
..+|+|||+|+.|+.+|..|++.|.+|+
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 4689999999999999999999998876
Q ss_pred ---------------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccC
Q 012165 235 ---------------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 289 (469)
Q Consensus 235 ---------------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 289 (469)
.+.+.+++.|++++.++++++++. ++ .|++.+|+++.+|.||.|+|..+.
T Consensus 91 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~~~g~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 91 VSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG---RLTLQTGEVLEADLIVGADGVGSK 161 (379)
T ss_dssp EEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEETTSCEEECSEEEECCCTTCH
T ss_pred eeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEECCCCEEEcCEEEECCCccHH
Confidence 012334567999999999999985 44 477889999999999999999874
No 254
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.77 E-value=0.0001 Score=73.89 Aligned_cols=49 Identities=27% Similarity=0.531 Sum_probs=41.3
Q ss_pred HHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCcc
Q 012165 239 LYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 288 (469)
Q Consensus 239 ~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p 288 (469)
.+++.||+++++++|+++..+ ++.+..|.+.+|+++.+|.||+|+|..+
T Consensus 143 ~~~~~GV~i~~~~~V~~i~~~-~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 143 RLKDLGVKIRTNTPVETIEYE-NGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHCCCEEEeCcEEEEEEec-CCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 345679999999999999854 5666678889998899999999999876
No 255
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.75 E-value=4.9e-05 Score=76.12 Aligned_cols=81 Identities=16% Similarity=0.241 Sum_probs=63.3
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCc-EEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHh
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGR-LCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 128 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~-V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (469)
..++|+|||+|.+|+-.|..|++.+. + |+++++.+.. +
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~~---~~V~l~~r~~~~---------------------l----------------- 249 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVAK---HPIYQSLLGGGD---------------------I----------------- 249 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTSC---SSEEEECTTCCS---------------------C-----------------
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHhC---CcEEEEeCCCCc---------------------C-----------------
Confidence 45789999999999999999999875 6 9999876532 0
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCcEEEeCCCeE-EEeccEEeccCCCCC
Q 012165 129 WYKEKGIEMIYQDPVTSIDIEKQTLITNSGKL-LKYGSLIVATGCTAS 175 (469)
Q Consensus 129 ~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~-~~yd~lVlAtG~~~~ 175 (469)
...++.+ ...+..+..++..|++.+|+. +.+|.||+|||..|.
T Consensus 250 --~~~~i~~--~~~v~~~~~~~~~v~~~dG~~~~~~D~vi~atG~~~~ 293 (447)
T 2gv8_A 250 --QNESLQQ--VPEITKFDPTTREIYLKGGKVLSNIDRVIYCTGYLYS 293 (447)
T ss_dssp --BCSSEEE--ECCEEEEETTTTEEEETTTEEECCCSEEEECCCBCCC
T ss_pred --CCCCeEE--ecCeEEEecCCCEEEECCCCEeccCCEEEECCCCCcC
Confidence 1124443 357788876667899999986 689999999998875
No 256
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=97.74 E-value=8.2e-05 Score=72.04 Aligned_cols=59 Identities=12% Similarity=0.241 Sum_probs=45.0
Q ss_pred HHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCC--CEEeCCEEEEccCCccCCchhhhc-CC
Q 012165 238 QLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG--STIDADTIVIGIGAKPTVSPFERV-GL 298 (469)
Q Consensus 238 ~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g--~~i~~D~vi~a~G~~p~~~~~~~~-gl 298 (469)
+.+++.|++++++++|++++.++++.+ .|.+.+| .++.+|.||+|+|.... .+++.+ |+
T Consensus 158 ~~~~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~g~~~~~~a~~VV~A~G~~s~-~l~~~~~g~ 219 (369)
T 3dme_A 158 GDAESDGAQLVFHTPLIAGRVRPEGGF-ELDFGGAEPMTLSCRVLINAAGLHAP-GLARRIEGI 219 (369)
T ss_dssp HHHHHTTCEEECSCCEEEEEECTTSSE-EEEECTTSCEEEEEEEEEECCGGGHH-HHHHTEETS
T ss_pred HHHHHCCCEEECCCEEEEEEEcCCceE-EEEECCCceeEEEeCEEEECCCcchH-HHHHHhcCC
Confidence 445678999999999999987644434 4788888 48999999999998753 455555 54
No 257
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.74 E-value=4.4e-05 Score=76.78 Aligned_cols=122 Identities=18% Similarity=0.220 Sum_probs=69.4
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCC-CCCCCCCcccccCC--------CC----------CCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA-PYERPALTKGYLFP--------LD----------KKPAR 110 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~-~~~~~~l~~~~~~~--------~~----------~~~~~ 110 (469)
..++|+|||||..|+.+|..|++... ..+|+++++.+.+ |....++...++.+ .. .....
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~~-~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~ 304 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSYP-SVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTN 304 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCT-TEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGT
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcCC-CCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccC
Confidence 46799999999999999999999832 3489999987653 11101111100000 00 00000
Q ss_pred CCCCccccCCCCCCCCHhHHH-----HCCcEEEeCCcEEEEeCCCc--EEEeC---CCe--EEEeccEEeccCCCCC
Q 012165 111 LPGFHTCVGSGGERQTPEWYK-----EKGIEMIYQDPVTSIDIEKQ--TLITN---SGK--LLKYGSLIVATGCTAS 175 (469)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~-----~~~i~~~~~~~v~~id~~~~--~v~~~---~g~--~~~yd~lVlAtG~~~~ 175 (469)
+....... .......++. ..+++++.+++|+++..++. .|++. +|+ ++++|.||+|||.+|.
T Consensus 305 ~~~~~~~~---~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 305 YSVVDTDL---IERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQ 378 (463)
T ss_dssp SSCBCHHH---HHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECC
T ss_pred CCcCCHHH---HHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCC
Confidence 00000000 0000001111 15899999999999876554 35554 565 4899999999998876
No 258
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.72 E-value=1.6e-05 Score=81.08 Aligned_cols=47 Identities=19% Similarity=0.364 Sum_probs=37.9
Q ss_pred eHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCC
Q 012165 236 YEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA 286 (469)
Q Consensus 236 ~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~ 286 (469)
+.+.+++.|+++++++.|++|..+ ++ .+++.||+++.+|.||.++..
T Consensus 228 l~~~l~~~g~~i~~~~~V~~I~~~-~~---~v~~~~G~~~~ad~vI~t~P~ 274 (513)
T 4gde_A 228 VANTLPKEKTRFGEKGKVTKVNAN-NK---TVTLQDGTTIGYKKLVSTMAV 274 (513)
T ss_dssp HHHTSCGGGEEESGGGCEEEEETT-TT---EEEETTSCEEEEEEEEECSCH
T ss_pred HHHHHHhcCeeeecceEEEEEEcc-CC---EEEEcCCCEEECCEEEECCCH
Confidence 445566789999999999999853 33 367899999999999998764
No 259
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.71 E-value=6.2e-05 Score=77.29 Aligned_cols=83 Identities=13% Similarity=0.182 Sum_probs=64.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhCCCeEe-----------------------------------------------------
Q 012165 208 KKVVVVGGGYIGMEVAAAAVGWKLDTT----------------------------------------------------- 234 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~v~----------------------------------------------------- 234 (469)
.+|+|||+|+.|+.+|..|.+.|.+++
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ei 89 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPEM 89 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHHH
Confidence 479999999999999999999888776
Q ss_pred --eeHHHHHHcCc--EEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccC--CccCC
Q 012165 235 --RYEQLYQQNGV--KFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIG--AKPTV 290 (469)
Q Consensus 235 --~~~~~l~~~gV--~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G--~~p~~ 290 (469)
.+.+..++.|+ .++++++|.+++.+++.....|.+++|+++.+|.||+|+| .+|..
T Consensus 90 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~ 151 (545)
T 3uox_A 90 LRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRM 151 (545)
T ss_dssp HHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---
T ss_pred HHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcC
Confidence 11233455676 7888999999986554444568889999999999999999 55553
No 260
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.70 E-value=1.5e-05 Score=80.13 Aligned_cols=41 Identities=27% Similarity=0.519 Sum_probs=34.5
Q ss_pred cEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCc
Q 012165 245 VKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 287 (469)
Q Consensus 245 V~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~ 287 (469)
+++++++.|++|+..+++ + .|.+.+|+++.+|.||+|++..
T Consensus 248 ~~i~~~~~V~~i~~~~~~-~-~v~~~~g~~~~ad~vi~a~p~~ 288 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGSC-Y-SLELDNGVTLDADSVIVTAPHK 288 (470)
T ss_dssp EEEECSCCEEEEEECSSS-E-EEEESSSCEEEESEEEECSCHH
T ss_pred CEEEeCCceEEEEEcCCe-E-EEEECCCCEEECCEEEECCCHH
Confidence 699999999999876444 3 5888999899999999998753
No 261
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.70 E-value=8.3e-05 Score=76.86 Aligned_cols=50 Identities=16% Similarity=0.265 Sum_probs=39.0
Q ss_pred HHHcCcEEEcCCeEEEEEeCCCCcEEEEEcC--CCC--EEeCCEEEEccCCccC
Q 012165 240 YQQNGVKFVKGASIKNLEAGSDGRVAAVKLE--DGS--TIDADTIVIGIGAKPT 289 (469)
Q Consensus 240 l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~--~g~--~i~~D~vi~a~G~~p~ 289 (469)
+++.||++++++.++++..++++++.+|.+. +|+ .+.+|.||+|+|....
T Consensus 260 ~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 260 AKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp HHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred HHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 3457899999999999986533777777665 675 6899999999997553
No 262
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.69 E-value=6e-05 Score=78.48 Aligned_cols=97 Identities=11% Similarity=0.205 Sum_probs=66.5
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
..++++|||||..|+.+|..|++.|. +|+++++.... +.+.. .+ .....+.
T Consensus 285 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~l----~~~d~-----------~~-----------~~~~~~~ 335 (598)
T 2x8g_A 285 FPGKTLVIGASYVALECAGFLASLGG---DVTVMVRSILL----RGFDQ-----------QM-----------AEKVGDY 335 (598)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCSS----TTSCH-----------HH-----------HHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC---EEEEEECCcCc----CcCCH-----------HH-----------HHHHHHH
Confidence 34689999999999999999999986 79999865211 10000 00 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeC-------C--CcE--EE--eCCCeEEE--eccEEeccCCCCC
Q 012165 130 YKEKGIEMIYQDPVTSIDI-------E--KQT--LI--TNSGKLLK--YGSLIVATGCTAS 175 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~-------~--~~~--v~--~~~g~~~~--yd~lVlAtG~~~~ 175 (469)
+++.||+++.++.+..+.. . ... +. ..+|+++. +|.||+|+|.+|.
T Consensus 336 l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~ 396 (598)
T 2x8g_A 336 MENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQ 396 (598)
T ss_dssp HHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEEC
T ss_pred HHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccc
Confidence 7788999999877776632 1 122 32 35776555 9999999998875
No 263
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.69 E-value=3.5e-05 Score=81.67 Aligned_cols=99 Identities=13% Similarity=0.184 Sum_probs=73.1
Q ss_pred CCCcEEEEc--CcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCH
Q 012165 50 ENREFVIVG--GGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (469)
Q Consensus 50 ~~~~vvIIG--gG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (469)
..++|+||| +|..|+.+|..|++.|. +|++++..+... . .... ... .....
T Consensus 522 ~g~~VvViG~ggG~~g~e~A~~L~~~g~---~Vtlv~~~~~l~-------~-~~~~-----~~~-----------~~~l~ 574 (690)
T 3k30_A 522 DGKKVVVYDDDHYYLGGVVAELLAQKGY---EVSIVTPGAQVS-------S-WTNN-----TFE-----------VNRIQ 574 (690)
T ss_dssp SSSEEEEEECSCSSHHHHHHHHHHHTTC---EEEEEESSSSTT-------G-GGGG-----GTC-----------HHHHH
T ss_pred CCCEEEEEcCCCCccHHHHHHHHHhCCC---eeEEEecccccc-------c-cccc-----chh-----------HHHHH
Confidence 446799999 99999999999999986 899998765421 0 0000 000 11245
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCCcEEEe---CCCeEEEeccEEeccCCCCC
Q 012165 128 EWYKEKGIEMIYQDPVTSIDIEKQTLIT---NSGKLLKYGSLIVATGCTAS 175 (469)
Q Consensus 128 ~~~~~~~i~~~~~~~v~~id~~~~~v~~---~~g~~~~yd~lVlAtG~~~~ 175 (469)
+.+++.|++++.+++|.+++.++..+.. .+++++++|.||+|+|.+|.
T Consensus 575 ~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p~ 625 (690)
T 3k30_A 575 RRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVMVTARLPR 625 (690)
T ss_dssp HHHHHTTCEEEESEEEEEEETTEEEEEETTTCCEEEEECSEEEEESCEEEC
T ss_pred HHHHHCCCEEEcCcEEEEEECCeEEEEEccCCeEEEEECCEEEECCCCCCC
Confidence 6678899999999999999877655553 25567999999999998764
No 264
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.68 E-value=9.8e-05 Score=72.38 Aligned_cols=80 Identities=24% Similarity=0.312 Sum_probs=65.2
Q ss_pred CeEEEEcCChHHHHHHHHHHhCCCeEe-----------------------------------------------------
Q 012165 208 KKVVVVGGGYIGMEVAAAAVGWKLDTT----------------------------------------------------- 234 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~v~----------------------------------------------------- 234 (469)
.+|+|||+|+.|+-+|..|++.|.+|+
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPI 84 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEEE
Confidence 369999999999999999999998886
Q ss_pred ----------------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEc---CCCCEEeCCEEEEccCCcc
Q 012165 235 ----------------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL---EDGSTIDADTIVIGIGAKP 288 (469)
Q Consensus 235 ----------------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~---~~g~~i~~D~vi~a~G~~p 288 (469)
.+.+.+++.|++++.+++|++++.+ ++.+.+|.+ .+++++.+|.||.|.|...
T Consensus 85 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 85 ILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred EEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEe-CCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 2234455679999999999999865 566655666 3556899999999999876
No 265
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.65 E-value=2.9e-05 Score=77.40 Aligned_cols=36 Identities=17% Similarity=0.261 Sum_probs=31.5
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
.+++||+|||||++|+++|..|+++|+ +|+|+|+.+
T Consensus 20 ~m~~~ViIVGaGpaGl~~A~~La~~G~---~V~viE~~~ 55 (430)
T 3ihm_A 20 HMKKRIGIVGAGTAGLHLGLFLRQHDV---DVTVYTDRK 55 (430)
T ss_dssp ---CEEEEECCHHHHHHHHHHHHHTTC---EEEEEESCC
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCC---eEEEEcCCC
Confidence 355899999999999999999999998 899999876
No 266
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.63 E-value=0.00015 Score=75.05 Aligned_cols=81 Identities=17% Similarity=0.282 Sum_probs=66.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHhCCCeEe----------------------------------------------------
Q 012165 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTT---------------------------------------------------- 234 (469)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~v~---------------------------------------------------- 234 (469)
..+|+|||||+.|+-+|..|++.|.+|+
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 102 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQ 102 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCCC
Confidence 4789999999999999999999998876
Q ss_pred ------------------------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcC-CC--CEEeCCEEE
Q 012165 235 ------------------------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE-DG--STIDADTIV 281 (469)
Q Consensus 235 ------------------------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~-~g--~~i~~D~vi 281 (469)
.+.+.+++.|++++.+++|+++... ++.+..|.+. +| +++.+|+||
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~~G~~~~i~AdlVV 181 (591)
T 3i3l_A 103 APWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLS-DPDRVVLTVRRGGESVTVESDFVI 181 (591)
T ss_dssp CCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECC-STTCEEEEEEETTEEEEEEESEEE
T ss_pred ccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEEecCCceEEEEcCEEE
Confidence 1234556789999999999999854 3444567776 67 579999999
Q ss_pred EccCCcc
Q 012165 282 IGIGAKP 288 (469)
Q Consensus 282 ~a~G~~p 288 (469)
.|+|...
T Consensus 182 ~AdG~~S 188 (591)
T 3i3l_A 182 DAGGSGG 188 (591)
T ss_dssp ECCGGGC
T ss_pred ECCCCcc
Confidence 9999865
No 267
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.63 E-value=4.3e-05 Score=74.24 Aligned_cols=36 Identities=17% Similarity=0.372 Sum_probs=32.9
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
.+++||+|||||++|+++|.+|+++|. +|+|+|+..
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~---~V~vle~~~ 39 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGY---SVHILARDL 39 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCC---EEEEEeccC
Confidence 456899999999999999999999987 899999875
No 268
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.62 E-value=0.00021 Score=72.91 Aligned_cols=81 Identities=19% Similarity=0.203 Sum_probs=65.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhCCCeEe-----------------------------------------------------
Q 012165 208 KKVVVVGGGYIGMEVAAAAVGWKLDTT----------------------------------------------------- 234 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~v~----------------------------------------------------- 234 (469)
.+|+|||+|+.|+-+|..|++.|.+|+
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~ 87 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKEP 87 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSSCS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecCCc
Confidence 479999999999999999999998886
Q ss_pred ----------------------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEE--EcCCCC--EEeCCEEEE
Q 012165 235 ----------------------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAV--KLEDGS--TIDADTIVI 282 (469)
Q Consensus 235 ----------------------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v--~~~~g~--~i~~D~vi~ 282 (469)
.+.+.+++.|++++.+++|+++..+ ++.+.+| ...+|+ ++.+|+||.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~-~~~v~gv~~~~~dG~~~~i~ad~VI~ 166 (512)
T 3e1t_A 88 EPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFE-GERAVGVRYRNTEGVELMAHARFIVD 166 (512)
T ss_dssp SCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEE-TTEEEEEEEECSSSCEEEEEEEEEEE
T ss_pred cccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEE-CCEEEEEEEEeCCCCEEEEEcCEEEE
Confidence 2344556689999999999999864 5555444 445674 799999999
Q ss_pred ccCCccC
Q 012165 283 GIGAKPT 289 (469)
Q Consensus 283 a~G~~p~ 289 (469)
|+|....
T Consensus 167 AdG~~S~ 173 (512)
T 3e1t_A 167 ASGNRTR 173 (512)
T ss_dssp CCCTTCS
T ss_pred CCCcchH
Confidence 9998753
No 269
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.62 E-value=0.00017 Score=70.75 Aligned_cols=82 Identities=21% Similarity=0.207 Sum_probs=63.8
Q ss_pred CeEEEEcCChHHHHHHHHHHhCCCeEe-----------------------------------------------------
Q 012165 208 KKVVVVGGGYIGMEVAAAAVGWKLDTT----------------------------------------------------- 234 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~v~----------------------------------------------------- 234 (469)
.+|+|||+|+.|+.+|..|++.|.+|+
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 82 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQ 82 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCc
Confidence 369999999999999999998887776
Q ss_pred -------------------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEc-CCCC--EEeCCEEEEccCC
Q 012165 235 -------------------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL-EDGS--TIDADTIVIGIGA 286 (469)
Q Consensus 235 -------------------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~-~~g~--~i~~D~vi~a~G~ 286 (469)
.+.+.+.+.|+++++++++++++.++++.+ .|++ .+|+ ++.+|+||.|.|.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~-~v~~~~~g~~~~~~a~~vV~AdG~ 161 (394)
T 1k0i_A 83 RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERP-YVTFERDGERLRLDCDYIAGCDGF 161 (394)
T ss_dssp EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSC-EEEEEETTEEEEEECSEEEECCCT
T ss_pred eEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCce-EEEEecCCcEEEEEeCEEEECCCC
Confidence 112233456999999999999986433333 4666 6886 7999999999999
Q ss_pred ccCC
Q 012165 287 KPTV 290 (469)
Q Consensus 287 ~p~~ 290 (469)
....
T Consensus 162 ~S~v 165 (394)
T 1k0i_A 162 HGIS 165 (394)
T ss_dssp TCST
T ss_pred CcHH
Confidence 8754
No 270
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.60 E-value=4.8e-05 Score=76.76 Aligned_cols=51 Identities=27% Similarity=0.465 Sum_probs=39.3
Q ss_pred eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCc
Q 012165 235 RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 287 (469)
Q Consensus 235 ~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~ 287 (469)
.+.+.+++.|+++++++.|++|+..+++.+ .|.+ ++.++.+|.||++++..
T Consensus 239 ~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~-~v~~-~~~~~~ad~vv~a~p~~ 289 (477)
T 3nks_A 239 ALETHLTSRGVSVLRGQPVCGLSLQAEGRW-KVSL-RDSSLEADHVISAIPAS 289 (477)
T ss_dssp HHHHHHHHTTCEEECSCCCCEEEECGGGCE-EEEC-SSCEEEESEEEECSCHH
T ss_pred HHHHHHHhcCCEEEeCCEEEEEEEcCCceE-EEEE-CCeEEEcCEEEECCCHH
Confidence 456677788999999999999986544323 5665 55589999999998753
No 271
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.60 E-value=6.3e-05 Score=74.68 Aligned_cols=40 Identities=18% Similarity=0.228 Sum_probs=35.1
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcC-CCCCcEEEEcCCCCCCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHG-MADGRLCIVSKEAYAPY 91 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g-~~~~~V~vie~~~~~~~ 91 (469)
++++||+|||||++||+||..|++.| + +|+|+|+++..+.
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~---~v~v~E~~~~~GG 44 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQAGFH---DYTILERTDHVGG 44 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCC---CEEEECSSSCSST
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCC---cEEEEECCCCCCC
Confidence 34679999999999999999999998 6 7999999887643
No 272
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.57 E-value=0.00024 Score=67.94 Aligned_cols=44 Identities=11% Similarity=0.133 Sum_probs=35.5
Q ss_pred CcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEe-CCEEEEccCCccC
Q 012165 244 GVKFVKGASIKNLEAGSDGRVAAVKLEDGSTID-ADTIVIGIGAKPT 289 (469)
Q Consensus 244 gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~-~D~vi~a~G~~p~ 289 (469)
|++++++++|++++.++++ + .|.+.+|+.+. +|.||.|+|....
T Consensus 119 g~~i~~~~~v~~i~~~~~~-~-~v~~~~g~~~~~a~~vV~a~g~~~~ 163 (336)
T 1yvv_A 119 DMPVSFSCRITEVFRGEEH-W-NLLDAEGQNHGPFSHVIIATPAPQA 163 (336)
T ss_dssp TCCEECSCCEEEEEECSSC-E-EEEETTSCEEEEESEEEECSCHHHH
T ss_pred cCcEEecCEEEEEEEeCCE-E-EEEeCCCcCccccCEEEEcCCHHHH
Confidence 8899999999999876444 3 47788998764 9999999997543
No 273
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.56 E-value=7.5e-05 Score=72.56 Aligned_cols=42 Identities=19% Similarity=0.241 Sum_probs=36.0
Q ss_pred cCCCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCC
Q 012165 46 SFANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE-AYAP 90 (469)
Q Consensus 46 ~~~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~-~~~~ 90 (469)
+.....+||+|||||++||+||..|++.|+ +|+|+|++ +..+
T Consensus 39 ~~~~~~~~V~IIGAGiaGL~aA~~L~~~G~---~V~VlE~~~~~vG 81 (376)
T 2e1m_A 39 NPPGPPKRILIVGAGIAGLVAGDLLTRAGH---DVTILEANANRVG 81 (376)
T ss_dssp SSCCSCCEEEEECCBHHHHHHHHHHHHTSC---EEEEECSCSSCCB
T ss_pred CCCCCCceEEEECCCHHHHHHHHHHHHCCC---cEEEEeccccccC
Confidence 334567899999999999999999999987 89999998 6543
No 274
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.56 E-value=0.00012 Score=77.28 Aligned_cols=48 Identities=17% Similarity=0.302 Sum_probs=37.8
Q ss_pred HhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCC--eEEEeccEEeccCCCCC
Q 012165 127 PEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTAS 175 (469)
Q Consensus 127 ~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g--~~~~yd~lVlAtG~~~~ 175 (469)
.+.+++.||+++.++++.+++.+...+. .+| +++++|.||+|+|.+|.
T Consensus 580 ~~~l~~~GV~v~~~~~v~~i~~~~v~~~-~~G~~~~i~~D~Vi~a~G~~p~ 629 (671)
T 1ps9_A 580 RTTLLSRGVKMIPGVSYQKIDDDGLHVV-INGETQVLAVDNVVICAGQEPN 629 (671)
T ss_dssp HHHHHHTTCEEECSCEEEEEETTEEEEE-ETTEEEEECCSEEEECCCEEEC
T ss_pred HHHHHhcCCEEEeCcEEEEEeCCeEEEe-cCCeEEEEeCCEEEECCCcccc
Confidence 4567889999999999999986542332 566 57999999999998764
No 275
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.55 E-value=7.2e-05 Score=75.06 Aligned_cols=54 Identities=17% Similarity=0.214 Sum_probs=43.4
Q ss_pred eeHHHHHHcCcEEEcCCeEEEEEeCC-CCcEEEEEcCCCCEEeCCEEEEccCCccC
Q 012165 235 RYEQLYQQNGVKFVKGASIKNLEAGS-DGRVAAVKLEDGSTIDADTIVIGIGAKPT 289 (469)
Q Consensus 235 ~~~~~l~~~gV~~~~~~~v~~i~~~~-~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 289 (469)
.+.+.+++.|+++++++.|++|...+ ++++..|.+ +|+++.+|.||+++|..+.
T Consensus 247 al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 247 GFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp HHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 45666788899999999999998642 566666776 5788999999999998764
No 276
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.55 E-value=4.1e-05 Score=78.21 Aligned_cols=40 Identities=20% Similarity=0.262 Sum_probs=35.2
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcC-CCCCcEEEEcCCCCCCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHG-MADGRLCIVSKEAYAPY 91 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g-~~~~~V~vie~~~~~~~ 91 (469)
++.+||+|||||+|||+||..|++.| + +|+|+|+.+..+.
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~G~~---~V~VlEa~~riGG 46 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQNGIQ---DCLVLEARDRVGG 46 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHTTCC---SEEEECSSSSSBT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhcCCC---CEEEEeCCCCCCC
Confidence 34579999999999999999999998 6 7999999987654
No 277
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.55 E-value=0.00029 Score=72.64 Aligned_cols=82 Identities=21% Similarity=0.309 Sum_probs=64.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhCCCeEe----------------------------------------------------
Q 012165 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTT---------------------------------------------------- 234 (469)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~v~---------------------------------------------------- 234 (469)
.-.|+|||||..|+++|..+++.|.+|.
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~ 106 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLN 106 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEES
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeecc
Confidence 3579999999999999999999887665
Q ss_pred ---------------------eeHHHHHH-cCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCC
Q 012165 235 ---------------------RYEQLYQQ-NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 290 (469)
Q Consensus 235 ---------------------~~~~~l~~-~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 290 (469)
.+.+.+++ .|++++ +..|+++..+ ++.+.+|.+.+|+++.+|.||+|+|..++.
T Consensus 107 ~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e-~g~V~GV~t~dG~~i~AdaVVLATG~~s~~ 182 (637)
T 2zxi_A 107 TRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVK-NNQVVGVRTNLGVEYKTKAVVVTTGTFLNG 182 (637)
T ss_dssp TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEES-SSBEEEEEETTSCEEECSEEEECCTTCBTC
T ss_pred cccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEec-CCEEEEEEECCCcEEEeCEEEEccCCCccC
Confidence 01123444 589985 5688888753 667778999999999999999999987653
No 278
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.54 E-value=0.00083 Score=67.49 Aligned_cols=84 Identities=19% Similarity=0.317 Sum_probs=62.6
Q ss_pred CeEEEEcCChHHHHHHHHHHh---CCCe---Ee------------e----------------------------------
Q 012165 208 KKVVVVGGGYIGMEVAAAAVG---WKLD---TT------------R---------------------------------- 235 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~---~g~~---v~------------~---------------------------------- 235 (469)
++|+|||+|+.|+.+|..|++ .|.+ ++ .
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 589999999999999999999 8888 76 0
Q ss_pred ------------------------eHHHHHHcCcE--EEcCCeEEEEEeCCCCcEEEEEcCC---C--CEEeCCEEEEcc
Q 012165 236 ------------------------YEQLYQQNGVK--FVKGASIKNLEAGSDGRVAAVKLED---G--STIDADTIVIGI 284 (469)
Q Consensus 236 ------------------------~~~~l~~~gV~--~~~~~~v~~i~~~~~~~v~~v~~~~---g--~~i~~D~vi~a~ 284 (469)
+.+.+++.|++ +++++.|+.++..+++....|++.+ | .++.+|.||+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 11233455887 8899999999865442222455544 4 578999999999
Q ss_pred C--CccCCc
Q 012165 285 G--AKPTVS 291 (469)
Q Consensus 285 G--~~p~~~ 291 (469)
| ..|+..
T Consensus 163 G~~s~p~~p 171 (464)
T 2xve_A 163 GHFSTPYVP 171 (464)
T ss_dssp CSSSSBCCC
T ss_pred CCCCCCccC
Confidence 9 677654
No 279
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.53 E-value=0.00035 Score=68.62 Aligned_cols=81 Identities=17% Similarity=0.317 Sum_probs=63.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHhCCCeEe--------------------eeHHHHHH------------------------
Q 012165 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTT--------------------RYEQLYQQ------------------------ 242 (469)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~v~--------------------~~~~~l~~------------------------ 242 (469)
..+|+|||+|+.|+.+|..|++.|.+++ ...+.+++
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 84 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTGE 84 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCCC
Confidence 4689999999999999999999998887 00111111
Q ss_pred -------------------------cCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccC
Q 012165 243 -------------------------NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 289 (469)
Q Consensus 243 -------------------------~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 289 (469)
.|+++++++++++++.++++ + .+++.+|+++.+|+||.|.|....
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v-~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 85 RVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSET-V-QMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp EEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSC-E-EEEETTSCEEEESEEEECCCTTCH
T ss_pred ccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCE-E-EEEECCCCEEECCEEEECCCcchh
Confidence 26788899999999865443 4 478899999999999999998764
No 280
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.52 E-value=4.6e-05 Score=76.42 Aligned_cols=38 Identities=21% Similarity=0.357 Sum_probs=34.1
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~ 90 (469)
.++||+|||||++||+||..|++.|+ +|+|+|+.+..+
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~---~v~v~E~~~~~G 41 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGL---SVAVIEARDRVG 41 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC---cEEEEECCCCCC
Confidence 45799999999999999999999987 799999987654
No 281
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.52 E-value=0.00025 Score=71.03 Aligned_cols=82 Identities=22% Similarity=0.250 Sum_probs=63.9
Q ss_pred CeEEEEcCChHHHHHHHHHHhCCCeEe-----------------------------------------------------
Q 012165 208 KKVVVVGGGYIGMEVAAAAVGWKLDTT----------------------------------------------------- 234 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~v~----------------------------------------------------- 234 (469)
.+|+|||+|+.|+.+|..|++.|.+|.
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQT 86 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCce
Confidence 479999999999999999998877665
Q ss_pred ------------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcC---CCC--EEeCCEEEEccCCccCC
Q 012165 235 ------------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE---DGS--TIDADTIVIGIGAKPTV 290 (469)
Q Consensus 235 ------------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~---~g~--~i~~D~vi~a~G~~p~~ 290 (469)
.+.+.+++.|++++.+++++++..+ ++.+.+|.+. +|+ ++.+|.||.|.|.....
T Consensus 87 ~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~v 164 (453)
T 3atr_A 87 VWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFE-DGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSF 164 (453)
T ss_dssp EEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTT
T ss_pred EEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEE-CCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhh
Confidence 1123344579999999999999864 4555555554 675 79999999999987653
No 282
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.52 E-value=8.4e-05 Score=73.26 Aligned_cols=38 Identities=13% Similarity=0.190 Sum_probs=34.3
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHc-CCCCCcEEEEcCCCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEH-GMADGRLCIVSKEAYAP 90 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~-g~~~~~V~vie~~~~~~ 90 (469)
.++||+|||||++|++||..|++. |+ +|+|+|+++..+
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~---~v~v~E~~~~~G 44 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDK---RVLVLERRPHIG 44 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCC---CEEEECSSSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCC---CEEEEeCCCCCC
Confidence 368999999999999999999998 77 799999998764
No 283
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.51 E-value=0.00026 Score=73.18 Aligned_cols=80 Identities=21% Similarity=0.321 Sum_probs=63.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhCCCeEe-----------------------------------------------------
Q 012165 208 KKVVVVGGGYIGMEVAAAAVGWKLDTT----------------------------------------------------- 234 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~v~----------------------------------------------------- 234 (469)
-.|+|||||..|+++|..+++.|.+|.
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~~ 108 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNA 108 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhhc
Confidence 479999999999999999999887765
Q ss_pred --------------------eeHHHHHH-cCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccC
Q 012165 235 --------------------RYEQLYQQ-NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 289 (469)
Q Consensus 235 --------------------~~~~~l~~-~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 289 (469)
.+.+.+++ .|++++ +..++.+..+ ++.+.+|.+.+|.++.+|.||+|+|..+.
T Consensus 109 ~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e-~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 109 SKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVE-NDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEES-SSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred ccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEec-CCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 01223444 589985 5689998753 56777889999988999999999998754
No 284
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.51 E-value=0.0007 Score=69.49 Aligned_cols=80 Identities=14% Similarity=0.150 Sum_probs=61.8
Q ss_pred CeEEEEcCChHHHHHHHHHHhCCCeEe-----------------------------------------------------
Q 012165 208 KKVVVVGGGYIGMEVAAAAVGWKLDTT----------------------------------------------------- 234 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~v~----------------------------------------------------- 234 (469)
.+|+|||+|+.|+.+|..|++.|.++.
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~i 96 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEI 96 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHHH
Confidence 479999999999999999999887775
Q ss_pred --eeHHHHHHcC--cEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCc
Q 012165 235 --RYEQLYQQNG--VKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 287 (469)
Q Consensus 235 --~~~~~l~~~g--V~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~ 287 (469)
.+....++.+ +.++++++|.+++.++++....|.+++|+++.+|.||+|+|..
T Consensus 97 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~ 153 (542)
T 1w4x_A 97 LRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQL 153 (542)
T ss_dssp HHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCC
Confidence 0111123333 6788999999998655443446888899899999999999963
No 285
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.50 E-value=0.00031 Score=67.49 Aligned_cols=42 Identities=19% Similarity=0.246 Sum_probs=35.0
Q ss_pred cCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCC
Q 012165 243 NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA 286 (469)
Q Consensus 243 ~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~ 286 (469)
.|+++++++.|++++.++++ + .|.+.+|+++.+|.||+|++.
T Consensus 122 ~g~~i~~~~~V~~i~~~~~~-~-~v~~~~g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 122 SGAEVYFRHRVTQINLRDDK-W-EVSKQTGSPEQFDLIVLTMPV 163 (342)
T ss_dssp HTCEEESSCCEEEEEECSSS-E-EEEESSSCCEEESEEEECSCH
T ss_pred cCCEEEeCCEEEEEEEcCCE-E-EEEECCCCEEEcCEEEECCCH
Confidence 38999999999999975444 3 478888888999999999874
No 286
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.48 E-value=0.00029 Score=66.58 Aligned_cols=83 Identities=16% Similarity=0.247 Sum_probs=61.9
Q ss_pred CeEEEEcCChHHHHHHHHHHhCCCeEe---------------------------------------eeHHHHHHcCcEEE
Q 012165 208 KKVVVVGGGYIGMEVAAAAVGWKLDTT---------------------------------------RYEQLYQQNGVKFV 248 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~v~---------------------------------------~~~~~l~~~gV~~~ 248 (469)
..|+|||+|+.|+.+|..++++|.++. .+.+.+++.++++.
T Consensus 5 yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~~~ 84 (314)
T 4a5l_A 5 HDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTII 84 (314)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcEEE
Confidence 369999999999999999999988765 12345667788887
Q ss_pred cCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCchh
Q 012165 249 KGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPF 293 (469)
Q Consensus 249 ~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~ 293 (469)
... +.......+. ..+.+.++.++.+|.+|+|||.+|....+
T Consensus 85 ~~~-v~~~~~~~~~--~~~~~~~~~~~~~~~liiATG~~~~~~~i 126 (314)
T 4a5l_A 85 TET-IDHVDFSTQP--FKLFTEEGKEVLTKSVIIATGATAKRMHV 126 (314)
T ss_dssp CCC-EEEEECSSSS--EEEEETTCCEEEEEEEEECCCEEECCCCC
T ss_pred EeE-EEEeecCCCc--eEEEECCCeEEEEeEEEEcccccccccCC
Confidence 664 5555533222 24667888999999999999998864433
No 287
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.47 E-value=0.00028 Score=69.56 Aligned_cols=81 Identities=22% Similarity=0.333 Sum_probs=64.0
Q ss_pred cCCeEEEEcCChHHHHHHHHHHhCCCeEe---------------------------------------------------
Q 012165 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTT--------------------------------------------------- 234 (469)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~v~--------------------------------------------------- 234 (469)
...+|+|||+|+.|+-+|..|++.|.+|+
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 45689999999999999999999998886
Q ss_pred ------------------------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEcc
Q 012165 235 ------------------------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGI 284 (469)
Q Consensus 235 ------------------------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~ 284 (469)
.+.+.+++ ++++++++|++++.+++ .+ .+++.+|+++.+|+||.|.
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~-~v-~v~~~~g~~~~a~~vV~Ad 177 (407)
T 3rp8_A 102 GENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDAD-GV-TVWFTDGSSASGDLLIAAD 177 (407)
T ss_dssp CCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETT-EE-EEEETTSCEEEESEEEECC
T ss_pred CCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCC-cE-EEEEcCCCEEeeCEEEECC
Confidence 11122222 78889999999986543 34 5888999999999999999
Q ss_pred CCccCC
Q 012165 285 GAKPTV 290 (469)
Q Consensus 285 G~~p~~ 290 (469)
|.....
T Consensus 178 G~~S~v 183 (407)
T 3rp8_A 178 GSHSAL 183 (407)
T ss_dssp CTTCSS
T ss_pred CcChHH
Confidence 987654
No 288
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.47 E-value=4.9e-05 Score=81.66 Aligned_cols=80 Identities=11% Similarity=-0.007 Sum_probs=53.6
Q ss_pred ccccccccccccccCCCCcccccc--cCCcccccccccccc-----------cccCCCCCCcEEEEcCcHHHHHHHHHHH
Q 012165 5 SNSLSFKHGLSLWCPQSPSLHRIR--HSSAKNFQRRGFVVA-----------YSSFANENREFVIVGGGNAAGYAARTFV 71 (469)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----------~~~~~~~~~~vvIIGgG~AGl~aA~~L~ 71 (469)
+||...+++..|...|. |.. .++.+..+.+++... ..+.....++|+|||||++||++|..|+
T Consensus 223 ~~P~~a~~~~~~~~~~~----r~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~aGl~~A~~l~ 298 (852)
T 2xag_A 223 DNPKIQLTFEATLQQLE----APYNSDTVLVHRVHSYLERHGLINFGIYKRIKPLPTKKTGKVIIIGSGVSGLAAARQLQ 298 (852)
T ss_dssp TCTTBCCCHHHHHHHCC----TTTTSCHHHHHHHHHHHHHTTSSSCSSCBCSSCCCSSCCCEEEEECCSHHHHHHHHHHH
T ss_pred cCCHHHhhHHHHHHhCC----CcccCCcHHHHHHHHHHHHHHHHhcCcccccCCcccCCCCeEEEECCCHHHHHHHHHHH
Confidence 78888877766655443 322 233333333322211 0122345689999999999999999999
Q ss_pred HcCCCCCcEEEEcCCCCCCC
Q 012165 72 EHGMADGRLCIVSKEAYAPY 91 (469)
Q Consensus 72 ~~g~~~~~V~vie~~~~~~~ 91 (469)
+.|+ +|+|+|+.+..+.
T Consensus 299 ~~g~---~v~v~E~~~~~GG 315 (852)
T 2xag_A 299 SFGM---DVTLLEARDRVGG 315 (852)
T ss_dssp HTTC---EEEEECSSSSSCT
T ss_pred HCCC---cEEEEEecCcCCC
Confidence 9998 7999999876543
No 289
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.46 E-value=0.00011 Score=74.37 Aligned_cols=40 Identities=18% Similarity=0.311 Sum_probs=35.3
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY 91 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~ 91 (469)
.+.+||+|||||+|||+||..|++.|+ +|+|+|+.+..+.
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~---~v~v~E~~~~~GG 48 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGY---KVTVLEARTRPGG 48 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSCT
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCC---CEEEEeccCCCCC
Confidence 446799999999999999999999987 7999999887643
No 290
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.45 E-value=0.00045 Score=68.03 Aligned_cols=49 Identities=10% Similarity=0.239 Sum_probs=38.2
Q ss_pred HHHHcCcEEEcCCeEEEEEeCC---CCcEEEEEcCCCCEEeCCEEEEccCCccC
Q 012165 239 LYQQNGVKFVKGASIKNLEAGS---DGRVAAVKLEDGSTIDADTIVIGIGAKPT 289 (469)
Q Consensus 239 ~l~~~gV~~~~~~~v~~i~~~~---~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 289 (469)
.+++.||++++++.++++..++ ++.+ .|.+.+| ++.+|.||+|+|..+.
T Consensus 118 ~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~-~v~~~~g-~i~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 118 ECDKYGAKILLRSEVSQVERIQNDEKVRF-VLQVNST-QWQCKNLIVATGGLSM 169 (401)
T ss_dssp HHHHHTCEEECSCCEEEEEECCSCSSCCE-EEEETTE-EEEESEEEECCCCSSC
T ss_pred HHHHCCCEEEeCCEEEEEEcccCcCCCeE-EEEECCC-EEECCEEEECCCCccC
Confidence 3456799999999999998541 2333 5777777 7999999999999874
No 291
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.44 E-value=0.00012 Score=71.79 Aligned_cols=40 Identities=25% Similarity=0.417 Sum_probs=35.2
Q ss_pred CCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 012165 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (469)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~ 90 (469)
....+||+|||||++|+++|..|++.|. +|+|+|+.+..+
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~---~v~v~E~~~~~G 65 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQ---RVLIVDRRPHIG 65 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSS
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCC---ceEEEeccCCCC
Confidence 3456899999999999999999999987 799999987654
No 292
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.44 E-value=0.00052 Score=66.89 Aligned_cols=49 Identities=18% Similarity=0.279 Sum_probs=39.4
Q ss_pred HHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccC
Q 012165 239 LYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 289 (469)
Q Consensus 239 ~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 289 (469)
.+++.|++++.+++|++++.+ ++.+.+|.+.+| ++.+|.||+|+|....
T Consensus 158 ~~~~~Gv~i~~~~~v~~i~~~-~~~v~gv~~~~g-~i~a~~VV~A~G~~s~ 206 (382)
T 1y56_B 158 KAKEYGAKLLEYTEVKGFLIE-NNEIKGVKTNKG-IIKTGIVVNATNAWAN 206 (382)
T ss_dssp HHHHTTCEEECSCCEEEEEES-SSBEEEEEETTE-EEECSEEEECCGGGHH
T ss_pred HHHHCCCEEECCceEEEEEEE-CCEEEEEEECCc-EEECCEEEECcchhHH
Confidence 345678999999999999865 456656888777 7999999999998753
No 293
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.43 E-value=0.00022 Score=73.60 Aligned_cols=79 Identities=22% Similarity=0.321 Sum_probs=64.3
Q ss_pred CeEEEEcCChHHHHHHHHHHhCCCeEe-----------------------------------------------------
Q 012165 208 KKVVVVGGGYIGMEVAAAAVGWKLDTT----------------------------------------------------- 234 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~v~----------------------------------------------------- 234 (469)
..|+|||+|++|+-+|..|++.|.+|.
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 129 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQG 129 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTTC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccccc
Confidence 479999999999999999999998876
Q ss_pred -----------------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEc--CCC-CEEeCCEEEEccCCcc
Q 012165 235 -----------------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL--EDG-STIDADTIVIGIGAKP 288 (469)
Q Consensus 235 -----------------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~--~~g-~~i~~D~vi~a~G~~p 288 (469)
.+.+.+++.|++++.+++|++++.++++. .|++ .+| +++.+|+||.|.|...
T Consensus 130 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v--~v~~~~~~G~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 130 LDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAV--EVTVAGPSGPYPVRARYGVGCDGGRS 207 (570)
T ss_dssp CBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCE--EEEEEETTEEEEEEESEEEECSCSSC
T ss_pred ccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeE--EEEEEeCCCcEEEEeCEEEEcCCCCc
Confidence 23445556799999999999998654443 3555 788 7899999999999875
No 294
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.42 E-value=0.00012 Score=73.92 Aligned_cols=40 Identities=23% Similarity=0.163 Sum_probs=34.4
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~ 90 (469)
+++||+|||||++|+++|.+|++.|. +.+|+|+|+.+..+
T Consensus 3 ~~~~v~IiGaG~~Gl~~A~~L~~~g~-~~~v~v~E~~~~~G 42 (475)
T 3lov_A 3 SSKRLVIVGGGITGLAAAYYAERAFP-DLNITLLEAGERLG 42 (475)
T ss_dssp CSCEEEEECCBHHHHHHHHHHHHHCT-TSEEEEECSSSSSB
T ss_pred CcccEEEECCCHHHHHHHHHHHHhCC-CCCEEEEECCCCCC
Confidence 35899999999999999999999982 34899999987653
No 295
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.41 E-value=0.00048 Score=65.13 Aligned_cols=81 Identities=20% Similarity=0.233 Sum_probs=60.4
Q ss_pred eEEEEcCChHHHHHHHHHHhCCCeEe---------------------------------eeHHHHHHcCcEEEcCCeEEE
Q 012165 209 KVVVVGGGYIGMEVAAAAVGWKLDTT---------------------------------RYEQLYQQNGVKFVKGASIKN 255 (469)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g~~v~---------------------------------~~~~~l~~~gV~~~~~~~v~~ 255 (469)
.|+|||+|+.|+.+|..++++|.+|+ .......+.++.+..+.....
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSV 87 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECCCCEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccceeeeee
Confidence 68999999999999999999998876 123445566777777766555
Q ss_pred EEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCchh
Q 012165 256 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPF 293 (469)
Q Consensus 256 i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~ 293 (469)
.... .. .+...+++++.+|.+|+|||.+|....+
T Consensus 88 ~~~~-~~---~~~~~~~~~~~~d~liiAtGs~~~~~~i 121 (312)
T 4gcm_A 88 EDKG-EY---KVINFGNKELTAKAVIIATGAEYKKIGV 121 (312)
T ss_dssp EECS-SC---EEEECSSCEEEEEEEEECCCEEECCCCC
T ss_pred eeee-cc---eeeccCCeEEEeceeEEcccCccCcCCC
Confidence 5422 22 3455678899999999999998865433
No 296
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.39 E-value=0.00057 Score=72.18 Aligned_cols=47 Identities=13% Similarity=0.196 Sum_probs=38.8
Q ss_pred HHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCcc
Q 012165 240 YQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 288 (469)
Q Consensus 240 l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p 288 (469)
+++.|++++++++|+++..++ +.+ .|.+.+|.++.+|.||+|+|...
T Consensus 427 a~~~Gv~i~~~t~V~~l~~~~-~~v-~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 427 AQQQGLQIYYQYQLQNFSRKD-DCW-LLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHTTCEEEESCCEEEEEEET-TEE-EEEETTSCEEEESEEEECCGGGG
T ss_pred HHhCCCEEEeCCeeeEEEEeC-CeE-EEEECCCCEEECCEEEECCCcch
Confidence 346799999999999998653 444 68888888899999999999864
No 297
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.38 E-value=0.00032 Score=68.23 Aligned_cols=49 Identities=14% Similarity=0.083 Sum_probs=39.6
Q ss_pred HHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCcc
Q 012165 237 EQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 288 (469)
Q Consensus 237 ~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p 288 (469)
.+.+++.|++++.++.|++++.+++ . ..|++.+| ++.+|.||+|+|...
T Consensus 161 ~~~a~~~Gv~i~~~~~V~~i~~~~~-~-~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 161 LRGIRRNQGQVLCNHEALEIRRVDG-A-WEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHTTCEEESSCCCCEEEEETT-E-EEEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHHHCCCEEEcCCEEEEEEEeCC-e-EEEEeCCC-EEEcCEEEECCChhH
Confidence 4556678999999999999986533 3 46888887 899999999999754
No 298
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.38 E-value=0.00016 Score=72.46 Aligned_cols=96 Identities=19% Similarity=0.298 Sum_probs=64.5
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHh
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 128 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (469)
...++|+|||||..|+-+|..+.+.|. .+|+++++.+..+. |... ...+
T Consensus 262 ~~gk~VvVIGgG~~a~d~A~~~~r~Ga--~~Vtiv~r~~~~~~--p~~~---------------------------~e~~ 310 (456)
T 2vdc_G 262 AAGKHVVVLGGGDTAMDCVRTAIRQGA--TSVKCLYRRDRKNM--PGSQ---------------------------REVA 310 (456)
T ss_dssp CCCSEEEEECSSHHHHHHHHHHHHTTC--SEEEEECSSCSTTC--SSCH---------------------------HHHH
T ss_pred cCCCEEEEECCChhHHHHHHHHHHcCC--CEEEEEEeCCccCC--CCCH---------------------------HHHH
Confidence 346799999999999999999999874 25999977654211 0000 0124
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCcE--EEe---------C---------CC--eEEEeccEEeccCCCCC
Q 012165 129 WYKEKGIEMIYQDPVTSIDIEKQT--LIT---------N---------SG--KLLKYGSLIVATGCTAS 175 (469)
Q Consensus 129 ~~~~~~i~~~~~~~v~~id~~~~~--v~~---------~---------~g--~~~~yd~lVlAtG~~~~ 175 (469)
.+++.|++++.+..+..+..+++. |.+ . +| .++++|.||+|+|..|.
T Consensus 311 ~~~~~Gv~~~~~~~~~~i~~~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~ 379 (456)
T 2vdc_G 311 HAEEEGVEFIWQAAPEGFTGDTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPE 379 (456)
T ss_dssp HHHHTTCEEECCSSSCCEEEEEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECC
T ss_pred HHHHCCCEEEeCCCceEEeCCCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCC
Confidence 467789999888777666532210 111 1 22 46899999999998764
No 299
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.36 E-value=0.00073 Score=69.82 Aligned_cols=48 Identities=10% Similarity=0.203 Sum_probs=38.2
Q ss_pred HHcCcEEEcCCeEEEEEeCCCCcEEEEEcC--CCC--EEeCCEEEEccCCcc
Q 012165 241 QQNGVKFVKGASIKNLEAGSDGRVAAVKLE--DGS--TIDADTIVIGIGAKP 288 (469)
Q Consensus 241 ~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~--~g~--~i~~D~vi~a~G~~p 288 (469)
++.||++++++.++++..++++++.+|.+. +|+ ++.+|.||+|+|...
T Consensus 266 ~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 266 VKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 457899999999999986544777667665 675 689999999999753
No 300
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.36 E-value=0.00061 Score=70.41 Aligned_cols=82 Identities=21% Similarity=0.379 Sum_probs=63.4
Q ss_pred cCCeEEEEcCChHHHHHHHHHHhCCCeEe---------------------------------------------------
Q 012165 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTT--------------------------------------------------- 234 (469)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~v~--------------------------------------------------- 234 (469)
..-.|+|||+|..|+++|..+++.|.+|.
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l 99 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRML 99 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhc
Confidence 34589999999999999999999887765
Q ss_pred ----------------------eeHHHHHH-cCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccC
Q 012165 235 ----------------------RYEQLYQQ-NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 289 (469)
Q Consensus 235 ----------------------~~~~~l~~-~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 289 (469)
.+.+.+++ .|++++.+ .+..+..+ ++.+.+|.+.+|+++.+|.||+|+|..++
T Consensus 100 ~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~-~V~~L~~d-~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 100 NRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQD-TVIGVSAN-SGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp CSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEEC-CEEEEEEE-TTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred ccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEee-EEEEEEec-CCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 00123334 48888644 78887643 56677788899999999999999998755
No 301
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.35 E-value=0.00013 Score=73.55 Aligned_cols=39 Identities=18% Similarity=0.256 Sum_probs=33.4
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~ 90 (469)
..++||+|||||++||+||..|++.|+ +|+|+|+.+..+
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~---~v~v~E~~~~~G 52 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGT---DAVLLESSARLG 52 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTC---CEEEECSSSSSB
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC---CEEEEEcCCCCC
Confidence 445799999999999999999999987 799999988754
No 302
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.32 E-value=0.0002 Score=78.61 Aligned_cols=88 Identities=13% Similarity=0.210 Sum_probs=69.2
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (469)
.++++|||+|+.|+.+|..|++.|. +|+|++..+... . . .+.+
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G~---~Vtvv~~~~~~~-------~--------------------------~-~~~l 326 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATGG---VVAVIDARSSIS-------A--------------------------A-AAQA 326 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGTC---CSEEEESCSSCC-------H--------------------------H-HHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcCC---cEEEEECCCccc-------h--------------------------h-HHHH
Confidence 3689999999999999999999986 599998765420 0 0 2457
Q ss_pred HHCCcEEEeCCcEEEEeC--CCc--EEEeCC-------C--eEEEeccEEeccCCCCC
Q 012165 131 KEKGIEMIYQDPVTSIDI--EKQ--TLITNS-------G--KLLKYGSLIVATGCTAS 175 (469)
Q Consensus 131 ~~~~i~~~~~~~v~~id~--~~~--~v~~~~-------g--~~~~yd~lVlAtG~~~~ 175 (469)
++.||+++.++.+.++.. +++ .|++.+ | +++++|.|++|+|.+|.
T Consensus 327 ~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~ 384 (965)
T 2gag_A 327 VADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPV 384 (965)
T ss_dssp HHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEEC
T ss_pred HhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcC
Confidence 889999999999999976 333 455543 4 57999999999998775
No 303
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.31 E-value=0.0002 Score=72.51 Aligned_cols=40 Identities=20% Similarity=0.155 Sum_probs=34.6
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~ 90 (469)
++++||+|||||++|+++|..|++.|. .+|+|+|+.+..+
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~--~~v~v~E~~~~~G 46 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGY--KNWHLYECNDTPG 46 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTC--CSEEEEESSSSSS
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCC--CCEEEEeCCCCCC
Confidence 456899999999999999999999972 2799999987654
No 304
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.31 E-value=0.00017 Score=70.54 Aligned_cols=35 Identities=20% Similarity=0.210 Sum_probs=31.6
Q ss_pred CcEEEEcCcHHHHHHHHHHHHc--CCCCCcEEEEcCCCCC
Q 012165 52 REFVIVGGGNAAGYAARTFVEH--GMADGRLCIVSKEAYA 89 (469)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~--g~~~~~V~vie~~~~~ 89 (469)
.||+|||||++|+++|..|++. |. +|+|+|+.+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~---~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLW---AIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTS---EEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCC---CEEEEECCCCC
Confidence 3799999999999999999999 76 89999998654
No 305
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.30 E-value=0.0011 Score=68.33 Aligned_cols=50 Identities=20% Similarity=0.322 Sum_probs=38.3
Q ss_pred HHHcCcEEEcCCeEEEEEeCCCCcEEEEEcC--CCC--EEeCCEEEEccCCccC
Q 012165 240 YQQNGVKFVKGASIKNLEAGSDGRVAAVKLE--DGS--TIDADTIVIGIGAKPT 289 (469)
Q Consensus 240 l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~--~g~--~i~~D~vi~a~G~~p~ 289 (469)
+++.||++++++.++++..++++++.+|.+. +|+ .+.+|.||+|+|..++
T Consensus 265 ~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 265 AVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp HHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred HHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCcc
Confidence 4567999999999999975433777777665 664 6899999999997653
No 306
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.28 E-value=0.00019 Score=73.00 Aligned_cols=38 Identities=21% Similarity=0.347 Sum_probs=34.1
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~ 90 (469)
+++||+|||||++||+||..|++.|+ +|+|+|+.+..+
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~---~v~v~E~~~~~G 49 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGL---NVTVFEAEGKAG 49 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSC---EEEEECSSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC---cEEEEEeCCCCC
Confidence 45899999999999999999999987 899999998764
No 307
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.27 E-value=0.00023 Score=75.73 Aligned_cols=98 Identities=19% Similarity=0.225 Sum_probs=69.6
Q ss_pred CCCcEEEEc--CcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCH
Q 012165 50 ENREFVIVG--GGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (469)
Q Consensus 50 ~~~~vvIIG--gG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (469)
..++|+||| ||..|+.+|..|++.|. +|++++..+ .. .. ...+.. .....
T Consensus 527 ~gk~VvVIG~GgG~~g~e~A~~l~~~G~---~Vtlv~~~~-l~------~~-~~~~~~-----------------~~~~~ 578 (729)
T 1o94_A 527 IGKRVVILNADTYFMAPSLAEKLATAGH---EVTIVSGVH-LA------NY-MHFTLE-----------------YPNMM 578 (729)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHHTTC---EEEEEESSC-TT------HH-HHHTTC-----------------HHHHH
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcCC---EEEEEeccc-cc------cc-cccccc-----------------HHHHH
Confidence 357999999 99999999999999986 899998765 21 00 000000 01234
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCCcEEEe--CCC-eE------------------EEeccEEeccCCCCC
Q 012165 128 EWYKEKGIEMIYQDPVTSIDIEKQTLIT--NSG-KL------------------LKYGSLIVATGCTAS 175 (469)
Q Consensus 128 ~~~~~~~i~~~~~~~v~~id~~~~~v~~--~~g-~~------------------~~yd~lVlAtG~~~~ 175 (469)
+.+++.||+++.++++.+++.+...+.. .++ +. +++|.||+|+|..|.
T Consensus 579 ~~l~~~GV~i~~~~~v~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~ 647 (729)
T 1o94_A 579 RRLHELHVEELGDHFCSRIEPGRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSE 647 (729)
T ss_dssp HHHHHTTCEEECSEEEEEEETTEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEEC
T ss_pred HHHHhCCCEEEcCcEEEEEECCeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCC
Confidence 5678899999999999999865434432 222 32 899999999998764
No 308
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.26 E-value=0.00095 Score=67.69 Aligned_cols=81 Identities=22% Similarity=0.336 Sum_probs=65.8
Q ss_pred cCCeEEEEcCChHHHHHHHHHHhCCCeEe---------------------------------------------------
Q 012165 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTT--------------------------------------------------- 234 (469)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~v~--------------------------------------------------- 234 (469)
...+|+|||+|+.|+-+|..|++.|.++.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 90 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVD 90 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceecc
Confidence 45689999999999999999999998876
Q ss_pred ---------------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCC---EEeCCEEEEccCCcc
Q 012165 235 ---------------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS---TIDADTIVIGIGAKP 288 (469)
Q Consensus 235 ---------------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~---~i~~D~vi~a~G~~p 288 (469)
.+.+.+++.|+++++++++++++.++++ + .+++.+++ ++.+|+||.|.|...
T Consensus 91 ~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v-~v~~~~~~g~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 91 FGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDH-V-VVEVEGPDGPRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp GGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSC-E-EEEEECSSCEEEEEEEEEEECCCTTC
T ss_pred cccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE-E-EEEEEcCCCcEEEEeCEEEEccCccc
Confidence 2234455679999999999999876444 4 36777765 799999999999875
No 309
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.25 E-value=0.0001 Score=77.55 Aligned_cols=40 Identities=20% Similarity=0.361 Sum_probs=35.4
Q ss_pred CCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 012165 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (469)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~ 90 (469)
....++|+|||||++|+++|..|.+.|+ +|+|+|+.+..+
T Consensus 104 ~~~~~~v~viG~G~~gl~~a~~l~~~g~---~v~~~e~~~~~g 143 (662)
T 2z3y_A 104 TKKTGKVIIIGSGVSGLAAARQLQSFGM---DVTLLEARDRVG 143 (662)
T ss_dssp SSCCCEEEEECCBHHHHHHHHHHHHTTC---EEEEECSSSSSB
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHHCCC---eEEEEecCCCCC
Confidence 3556899999999999999999999998 799999987654
No 310
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.24 E-value=0.00025 Score=71.94 Aligned_cols=40 Identities=23% Similarity=0.310 Sum_probs=35.2
Q ss_pred CCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 012165 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (469)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~ 90 (469)
...++||+|||||++|+++|..|++.|. +|+|+|+.+..+
T Consensus 30 ~~~~~~v~IiGaG~~Gl~aA~~l~~~g~---~v~vlE~~~~~g 69 (498)
T 2iid_A 30 TSNPKHVVIVGAGMAGLSAAYVLAGAGH---QVTVLEASERPG 69 (498)
T ss_dssp CSSCCEEEEECCBHHHHHHHHHHHHHTC---EEEEECSSSSSB
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCC---eEEEEECCCCCC
Confidence 3456899999999999999999999987 799999987654
No 311
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.23 E-value=0.0013 Score=68.06 Aligned_cols=50 Identities=20% Similarity=0.314 Sum_probs=40.5
Q ss_pred HHHcCcEEEcCCeEEEEEeCCCCcEEEEEcC------CC---------CEEeCCEEEEccCCccC
Q 012165 240 YQQNGVKFVKGASIKNLEAGSDGRVAAVKLE------DG---------STIDADTIVIGIGAKPT 289 (469)
Q Consensus 240 l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~------~g---------~~i~~D~vi~a~G~~p~ 289 (469)
+++.||++++++.++++..++++.+.+|.+. +| .++.+|.||.|.|....
T Consensus 154 a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 154 AEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp HHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred HHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCch
Confidence 3456999999999999987666777677776 33 68999999999999864
No 312
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.23 E-value=0.00029 Score=67.92 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=32.1
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (469)
|+||+|||||+||+.||..|++.|. +|+|+|+.+.
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~---~V~liE~~~~ 35 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGV---PVRLFEMRPK 35 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC---CEEEECCTTT
T ss_pred CCCEEEECchHHHHHHHHHHHHCCC---cEEEEeccCC
Confidence 4799999999999999999999987 7999998764
No 313
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.22 E-value=0.00024 Score=69.51 Aligned_cols=37 Identities=22% Similarity=0.444 Sum_probs=33.3
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~ 90 (469)
+.+|+|||||++|+++|..|++.|+ +|+|+|+++..+
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~---~v~v~E~~~~~G 39 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGH---QVHIIDQRDHIG 39 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC---EEEEEESSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC---cEEEEEecCCcC
Confidence 4699999999999999999999886 899999987654
No 314
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.22 E-value=0.00022 Score=72.31 Aligned_cols=51 Identities=22% Similarity=0.336 Sum_probs=41.1
Q ss_pred eeHHHHHHcC-cEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCc
Q 012165 235 RYEQLYQQNG-VKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 287 (469)
Q Consensus 235 ~~~~~l~~~g-V~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~ 287 (469)
.+.+.+++.| +++++++.|++|+..++ .+ .|.+.+|+++.+|.||+|+|..
T Consensus 260 ~l~~~l~~~g~~~i~~~~~V~~i~~~~~-~v-~v~~~~g~~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 260 RFWEEAAGTGRLGYVFGCPVRSVVNERD-AA-RVTARDGREFVAKRVVCTIPLN 311 (495)
T ss_dssp HHHHHHHTTTCEEEESSCCEEEEEECSS-SE-EEEETTCCEEEEEEEEECCCGG
T ss_pred HHHHHhhhcCceEEEeCCEEEEEEEcCC-EE-EEEECCCCEEEcCEEEECCCHH
Confidence 4556677778 99999999999986543 34 5788888889999999999963
No 315
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.21 E-value=0.0013 Score=64.66 Aligned_cols=83 Identities=19% Similarity=0.369 Sum_probs=62.8
Q ss_pred cCCeEEEEcCChHHHHHHHHHHhCCCeEe-----------------ee-----HHHHHHc--------------------
Q 012165 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTT-----------------RY-----EQLYQQN-------------------- 243 (469)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~v~-----------------~~-----~~~l~~~-------------------- 243 (469)
...+|+|||+|+.|+.+|..|++.|.+|+ .+ .+.+++.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~ 104 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADE 104 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECC
Confidence 34689999999999999999999998887 00 1222221
Q ss_pred -----------------------------------CcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCcc
Q 012165 244 -----------------------------------GVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 288 (469)
Q Consensus 244 -----------------------------------gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p 288 (469)
++++++++++++++.+++ .+ .|++.+|+++.+|+||.|.|...
T Consensus 105 ~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~-~v-~v~~~~g~~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 105 KGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKK-KW-TLTFENKPSETADLVILANGGMS 182 (398)
T ss_dssp SSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSS-SE-EEEETTSCCEEESEEEECSCTTC
T ss_pred CCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCC-EE-EEEECCCcEEecCEEEECCCcch
Confidence 235777888999986543 34 57888998999999999999876
Q ss_pred CC
Q 012165 289 TV 290 (469)
Q Consensus 289 ~~ 290 (469)
..
T Consensus 183 ~v 184 (398)
T 2xdo_A 183 KV 184 (398)
T ss_dssp SC
T ss_pred hH
Confidence 53
No 316
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.19 E-value=0.00023 Score=69.21 Aligned_cols=36 Identities=17% Similarity=0.321 Sum_probs=32.6
Q ss_pred CcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 012165 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (469)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~ 90 (469)
+||+|||||++|+++|..|++.|. +|+|+|+.+..+
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~---~v~v~E~~~~~G 37 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNK---KVLVIEKRNHIG 37 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTC---CEEEECSSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCC---cEEEEecCCCCC
Confidence 589999999999999999999987 799999987654
No 317
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.17 E-value=0.0002 Score=69.05 Aligned_cols=35 Identities=14% Similarity=0.091 Sum_probs=30.4
Q ss_pred cEEEEcCcHHHHHHHHHHHHcCC---CCCcEEEEcCCC
Q 012165 53 EFVIVGGGNAAGYAARTFVEHGM---ADGRLCIVSKEA 87 (469)
Q Consensus 53 ~vvIIGgG~AGl~aA~~L~~~g~---~~~~V~vie~~~ 87 (469)
||+|||||++|+++|.+|+++|. +..+|+|+|+..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 89999999999999999999971 124899999876
No 318
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.16 E-value=0.001 Score=67.43 Aligned_cols=82 Identities=23% Similarity=0.281 Sum_probs=65.8
Q ss_pred hcCCeEEEEcCChHHHHHHHHHHhCCCeEe--------------------------------------------------
Q 012165 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTT-------------------------------------------------- 234 (469)
Q Consensus 205 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~-------------------------------------------------- 234 (469)
....+|+|||+|+.|+-+|..|++.|.++.
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 88 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPI 88 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceec
Confidence 345689999999999999999999998876
Q ss_pred ----------------------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCC---EEeCCEEEEccCCcc
Q 012165 235 ----------------------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS---TIDADTIVIGIGAKP 288 (469)
Q Consensus 235 ----------------------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~---~i~~D~vi~a~G~~p 288 (469)
.+.+.+++.|+++++++++++++.+++ .+ .+++.++. ++.+|+||.|.|...
T Consensus 89 ~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~-~v-~v~~~~~~g~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 89 DFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGA-GV-TVEVRGPEGKHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp EGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETT-EE-EEEEEETTEEEEEEESEEEECCCTTC
T ss_pred ccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCC-eE-EEEEEcCCCCEEEEeCEEEECCCcch
Confidence 223445567999999999999986544 34 46676664 799999999999875
No 319
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=97.15 E-value=0.0013 Score=64.38 Aligned_cols=48 Identities=19% Similarity=0.354 Sum_probs=39.0
Q ss_pred HHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccC
Q 012165 240 YQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 289 (469)
Q Consensus 240 l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 289 (469)
+++.|++++.+++|+++..+ ++.+..|.+.+| ++.+|.||+|+|....
T Consensus 184 ~~~~g~~i~~~~~v~~i~~~-~~~~~~v~~~~g-~~~a~~vV~a~G~~s~ 231 (405)
T 2gag_B 184 ANEMGVDIIQNCEVTGFIKD-GEKVTGVKTTRG-TIHAGKVALAGAGHSS 231 (405)
T ss_dssp HHHTTCEEECSCCEEEEEES-SSBEEEEEETTC-CEEEEEEEECCGGGHH
T ss_pred HHHCCCEEEcCCeEEEEEEe-CCEEEEEEeCCc-eEECCEEEECCchhHH
Confidence 44568999999999999864 455667888888 7999999999998653
No 320
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.12 E-value=0.001 Score=64.73 Aligned_cols=54 Identities=17% Similarity=0.297 Sum_probs=40.5
Q ss_pred HHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCchhhhcC
Q 012165 240 YQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVG 297 (469)
Q Consensus 240 l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~g 297 (469)
+++.|++++.++.|++++.. ++.+ .|.+.+| ++.+|.||+|+|.... .++...+
T Consensus 174 ~~~~g~~i~~~~~v~~i~~~-~~~~-~v~~~~g-~~~a~~vV~A~G~~s~-~l~~~~~ 227 (382)
T 1ryi_A 174 AKMLGAEIFEHTPVLHVERD-GEAL-FIKTPSG-DVWANHVVVASGVWSG-MFFKQLG 227 (382)
T ss_dssp HHHTTCEEETTCCCCEEECS-SSSE-EEEETTE-EEEEEEEEECCGGGTH-HHHHHTT
T ss_pred HHHCCCEEEcCCcEEEEEEE-CCEE-EEEcCCc-eEEcCEEEECCChhHH-HHHHhcC
Confidence 34568999999999999854 4445 6777777 8999999999998653 3444444
No 321
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.10 E-value=0.0013 Score=67.38 Aligned_cols=50 Identities=16% Similarity=0.207 Sum_probs=38.1
Q ss_pred HHHHHcCcEEEcCCeEEEEEeCCCC---cEEEEEcCCC---CEEeCCEEEEccCCcc
Q 012165 238 QLYQQNGVKFVKGASIKNLEAGSDG---RVAAVKLEDG---STIDADTIVIGIGAKP 288 (469)
Q Consensus 238 ~~l~~~gV~~~~~~~v~~i~~~~~~---~v~~v~~~~g---~~i~~D~vi~a~G~~p 288 (469)
+.+++.|+++++++++++++.++++ .+ .+.+.++ .++.+|+||.|.|...
T Consensus 128 ~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v-~v~~~~~~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 128 AQARKHGGAIRFGTRLLSFRQHDDDAGAGV-TARLAGPDGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp HHHHHTTCEEESSCEEEEEEEECGGGCSEE-EEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHhCCCEEEeCCEEEEEEECCCCccccE-EEEEEcCCCeEEEEeCEEEECCCCcc
Confidence 3445679999999999999876442 33 4666665 6899999999999864
No 322
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.07 E-value=0.00029 Score=73.82 Aligned_cols=35 Identities=23% Similarity=0.269 Sum_probs=32.0
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (469)
.+||||||||.||++||.+|++.|. +|+|||+.+.
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~---~V~vlEK~~~ 39 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGL---STIVLSLIPV 39 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTC---CEEEECSSCG
T ss_pred cccEEEECchHHHHHHHHHHHHCCC---cEEEEeccCC
Confidence 5799999999999999999999987 7999999753
No 323
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.06 E-value=0.00055 Score=68.14 Aligned_cols=53 Identities=15% Similarity=0.348 Sum_probs=42.5
Q ss_pred eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccC
Q 012165 235 RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 289 (469)
Q Consensus 235 ~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 289 (469)
.+.+.+++.|+++++++.|++|... ++++..|. .+|+++.+|.||+++|..+.
T Consensus 239 ~l~~~~~~~G~~i~~~~~V~~I~~~-~~~v~~v~-~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 239 GFARLSAIYGGTYMLNKPVDDIIME-NGKVVGVK-SEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp HHHHHHHHHTCCCBCSCCCCEEEEE-TTEEEEEE-ETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHcCCEEECCCEEEEEEEe-CCEEEEEE-ECCeEEECCEEEECCCCCcc
Confidence 4556677889999999999999864 56665565 47888999999999998764
No 324
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=96.97 E-value=0.00059 Score=68.30 Aligned_cols=53 Identities=17% Similarity=0.322 Sum_probs=45.0
Q ss_pred eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCc
Q 012165 235 RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 287 (469)
Q Consensus 235 ~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~ 287 (469)
.+.+.+++.|+++++++.|++|..++++++.+|++.+|+++.||.||.+++..
T Consensus 261 aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 261 GFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp HHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 45677889999999999999998645778889999999999999999999988
No 325
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=96.96 E-value=0.0023 Score=62.36 Aligned_cols=56 Identities=18% Similarity=0.467 Sum_probs=40.5
Q ss_pred HHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCchhhhcC
Q 012165 238 QLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVG 297 (469)
Q Consensus 238 ~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~g 297 (469)
+.+++.|++++.++.|++++..+++ + .+.+.+| ++.+|.||+|+|...+ .++..++
T Consensus 158 ~~~~~~Gv~i~~~~~v~~i~~~~~~-~-~v~~~~g-~~~a~~vV~A~G~~~~-~l~~~~g 213 (389)
T 2gf3_A 158 ELAEARGAKVLTHTRVEDFDISPDS-V-KIETANG-SYTADKLIVSMGAWNS-KLLSKLN 213 (389)
T ss_dssp HHHHHTTCEEECSCCEEEEEECSSC-E-EEEETTE-EEEEEEEEECCGGGHH-HHGGGGT
T ss_pred HHHHHCCCEEEcCcEEEEEEecCCe-E-EEEeCCC-EEEeCEEEEecCccHH-HHhhhhc
Confidence 3445678999999999999865443 3 4666666 7999999999998754 3444443
No 326
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=96.95 E-value=0.0052 Score=62.88 Aligned_cols=47 Identities=19% Similarity=0.361 Sum_probs=38.9
Q ss_pred cCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCC
Q 012165 243 NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 290 (469)
Q Consensus 243 ~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 290 (469)
.|++++.+ +|++++.++++.+..|.+.+|+++.+|.||.|+|.....
T Consensus 178 ~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 178 RGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLL 224 (538)
T ss_dssp TTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCC
T ss_pred CCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhh
Confidence 57888888 799998755666667888899889999999999987653
No 327
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=96.95 E-value=0.0015 Score=64.36 Aligned_cols=80 Identities=20% Similarity=0.271 Sum_probs=60.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHhCCCe-Ee---------------------------------------------------
Q 012165 207 AKKVVVVGGGYIGMEVAAAAVGWKLD-TT--------------------------------------------------- 234 (469)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~-v~--------------------------------------------------- 234 (469)
..+|+|||+|+.|+.+|..|++.|.+ |+
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g 83 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSG 83 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCC
Confidence 35899999999999999999999998 76
Q ss_pred ----------------------------eeHHHHHH-cC-cEEEcCCeEEEEEeCCCCcEEEEEcCC---C--CEEeCCE
Q 012165 235 ----------------------------RYEQLYQQ-NG-VKFVKGASIKNLEAGSDGRVAAVKLED---G--STIDADT 279 (469)
Q Consensus 235 ----------------------------~~~~~l~~-~g-V~~~~~~~v~~i~~~~~~~v~~v~~~~---g--~~i~~D~ 279 (469)
.+.+.+++ .| +++++++++++++. +++ + .+.+.+ | +++.+|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~-v-~v~~~~~~~g~~~~~~ad~ 160 (410)
T 3c96_A 84 ATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDG-R-VLIGARDGHGKPQALGADV 160 (410)
T ss_dssp CEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETT-E-EEEEEEETTSCEEEEEESE
T ss_pred CEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCc-c-EEEEecCCCCCceEEecCE
Confidence 00122333 25 68999999999986 444 3 355554 7 5799999
Q ss_pred EEEccCCccC
Q 012165 280 IVIGIGAKPT 289 (469)
Q Consensus 280 vi~a~G~~p~ 289 (469)
||.|.|....
T Consensus 161 vV~AdG~~S~ 170 (410)
T 3c96_A 161 LVGADGIHSA 170 (410)
T ss_dssp EEECCCTTCH
T ss_pred EEECCCccch
Confidence 9999998764
No 328
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=96.94 E-value=0.0027 Score=68.68 Aligned_cols=49 Identities=29% Similarity=0.447 Sum_probs=39.7
Q ss_pred HHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCcc
Q 012165 238 QLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 288 (469)
Q Consensus 238 ~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p 288 (469)
+.+++.|++++.++.|++++.. ++.+..|.+.+| ++.+|.||+|+|...
T Consensus 159 ~~a~~~Gv~i~~~t~V~~i~~~-~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 159 KRTESAGVTYRGSTTVTGIEQS-GGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHcCCEEECCceEEEEEEe-CCEEEEEEECCc-EEECCEEEECCccch
Confidence 4445679999999999999864 455666788777 799999999999865
No 329
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=96.92 E-value=0.00067 Score=70.02 Aligned_cols=51 Identities=14% Similarity=0.135 Sum_probs=39.2
Q ss_pred HHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcC---CCC--EEeCCEEEEccCCcc
Q 012165 237 EQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE---DGS--TIDADTIVIGIGAKP 288 (469)
Q Consensus 237 ~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~---~g~--~i~~D~vi~a~G~~p 288 (469)
.+.+++.|++++.+++|+++..+ ++.+.+|.+. +|+ ++.+|.||+|+|.-.
T Consensus 195 ~~~a~~~Ga~i~~~t~V~~l~~~-~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 195 IKKAAEDGAYLVSKMKAVGFLYE-GDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHcCCeEEeccEEEEEEEe-CCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 34567889999999999999864 4566667653 343 699999999999754
No 330
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.92 E-value=0.0014 Score=72.51 Aligned_cols=93 Identities=18% Similarity=0.222 Sum_probs=63.7
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (469)
..+|+|||||..|+-+|..+++.|. .+|+++++.+.. .+.. + ....+.+
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~--~~Vtvv~r~~~~----------~~~~----------~---------~~e~~~~ 380 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGA--RRVFLVFRKGFV----------NIRA----------V---------PEEVELA 380 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTC--SEEEEECSSCGG----------GCCS----------C---------HHHHHHH
T ss_pred CCcEEEECCChHHHHHHHHHHHcCC--CEEEEEEecChh----------hCCC----------C---------HHHHHHH
Confidence 4589999999999999999999874 279999876421 0000 0 0012456
Q ss_pred HHCCcEEEeCCcEEEEeCCCcE---EEeC------CC---------eEEEeccEEeccCCCC
Q 012165 131 KEKGIEMIYQDPVTSIDIEKQT---LITN------SG---------KLLKYGSLIVATGCTA 174 (469)
Q Consensus 131 ~~~~i~~~~~~~v~~id~~~~~---v~~~------~g---------~~~~yd~lVlAtG~~~ 174 (469)
++.|++++.+..+.++..++.. |++. +| .++++|.||+|+|..|
T Consensus 381 ~~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~ 442 (1025)
T 1gte_A 381 KEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVL 442 (1025)
T ss_dssp HHTTCEEECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEEC
T ss_pred HHcCCEEEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCC
Confidence 7789999888777777643322 2221 22 3689999999999864
No 331
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.88 E-value=0.00052 Score=71.86 Aligned_cols=36 Identities=25% Similarity=0.364 Sum_probs=31.9
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHc------CCCCCcEEEEcCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEH------GMADGRLCIVSKEAY 88 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~------g~~~~~V~vie~~~~ 88 (469)
..+||||||||+||++||.+|++. |. +|+|||+...
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~---~V~vleK~~~ 62 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEA---KILLVDKASL 62 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTC---CEEEECSSCT
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCC---cEEEEEecCC
Confidence 358999999999999999999997 76 7999999753
No 332
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=96.84 E-value=0.0021 Score=66.10 Aligned_cols=49 Identities=20% Similarity=0.199 Sum_probs=38.4
Q ss_pred HHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCC---C--CEEeCCEEEEccCCcc
Q 012165 239 LYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED---G--STIDADTIVIGIGAKP 288 (469)
Q Consensus 239 ~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~---g--~~i~~D~vi~a~G~~p 288 (469)
.+++.|++++.+++|+++..+ ++.+.+|.+.+ | .++.+|.||.|+|...
T Consensus 179 ~a~~~G~~i~~~~~V~~l~~~-~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 179 EAVARGAVALNYMKVESFIYD-QGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHTTCEEEESEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHcCCEEEcCCEEEEEEEc-CCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 355679999999999999864 56666677654 3 4799999999999754
No 333
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=96.83 E-value=0.0039 Score=63.32 Aligned_cols=49 Identities=18% Similarity=0.301 Sum_probs=38.6
Q ss_pred HHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCC-C--EEeCC-EEEEccCCcc
Q 012165 240 YQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG-S--TIDAD-TIVIGIGAKP 288 (469)
Q Consensus 240 l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g-~--~i~~D-~vi~a~G~~p 288 (469)
+++.||++++++.++++..++++++.+|...++ + ++.+| .||+|+|--.
T Consensus 212 ~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 212 AEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 346799999999999998765688878776543 2 58996 9999998654
No 334
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=96.83 E-value=0.0041 Score=60.16 Aligned_cols=46 Identities=17% Similarity=0.344 Sum_probs=36.0
Q ss_pred HHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCcc
Q 012165 240 YQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 288 (469)
Q Consensus 240 l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p 288 (469)
+++.|++++.+++|++++.++++ + .+.+.+| ++.+|.||+|+|...
T Consensus 159 ~~~~G~~i~~~~~V~~i~~~~~~-~-~v~~~~g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 159 AKEAGCAQLFNCPVTAIRHDDDG-V-TIETADG-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHTTCEEECSCCEEEEEECSSS-E-EEEESSC-EEEEEEEEECCGGGG
T ss_pred HHHCCCEEEcCCEEEEEEEcCCE-E-EEEECCC-eEEcCEEEEcCCccH
Confidence 34568999999999999865443 3 5777777 599999999999754
No 335
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=96.83 E-value=0.0034 Score=59.86 Aligned_cols=120 Identities=23% Similarity=0.270 Sum_probs=78.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHhC--CCeEe--------------------------------------------------
Q 012165 207 AKKVVVVGGGYIGMEVAAAAVGW--KLDTT-------------------------------------------------- 234 (469)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~--g~~v~-------------------------------------------------- 234 (469)
...|+|||+|+.|+.+|..|++. |.+|.
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~ 158 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKH 158 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEec
Confidence 45899999999999999999987 77765
Q ss_pred ------eeHHHHHH-cCcEEEcCCeEEEEEeCCC----------------C--cEEEEEcC--------------CCCEE
Q 012165 235 ------RYEQLYQQ-NGVKFVKGASIKNLEAGSD----------------G--RVAAVKLE--------------DGSTI 275 (469)
Q Consensus 235 ------~~~~~l~~-~gV~~~~~~~v~~i~~~~~----------------~--~v~~v~~~--------------~g~~i 275 (469)
.+.+.+.+ .|++++.++.+.++..+++ + ++.+|... +..++
T Consensus 159 ~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i 238 (344)
T 3jsk_A 159 AALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTI 238 (344)
T ss_dssp HHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEE
Confidence 11233444 5999999999998875432 3 66666542 22479
Q ss_pred eCCEEEEccCCccCC-ch----hhhcCCccc-CCCEEeCCC-------CCC--CCCceEEeccccc
Q 012165 276 DADTIVIGIGAKPTV-SP----FERVGLNSS-VGGIQVDGQ-------FRT--RMPGIFAIGDVAA 326 (469)
Q Consensus 276 ~~D~vi~a~G~~p~~-~~----~~~~gl~~~-~g~i~Vd~~-------~~t--~~~~Vfa~GD~a~ 326 (469)
.++.||.|+|..... .+ +...++... .|.-..+.. -.| -+|++|++|=.+.
T Consensus 239 ~Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~v~~gl~~~gm~~~ 304 (344)
T 3jsk_A 239 NAPVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTREIVPGLIVGGMELS 304 (344)
T ss_dssp ECSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCEEEETTEEECGGGHH
T ss_pred EcCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCceEcCCEEEechhhH
Confidence 999999999987642 12 334444311 111111100 012 3799999997664
No 336
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.74 E-value=0.001 Score=69.63 Aligned_cols=36 Identities=28% Similarity=0.450 Sum_probs=31.8
Q ss_pred CCCcEEEEcCcHHHHHHHHHHH---H-cCCCCCcEEEEcCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFV---E-HGMADGRLCIVSKEAY 88 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~---~-~g~~~~~V~vie~~~~ 88 (469)
..+||||||||+||++||..|+ + .|. +|+|||+.+.
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~---~V~vlEK~~~ 60 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGL---KVTLVEKAAV 60 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTC---CEEEECSSCT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCC---eEEEEeCcCC
Confidence 3579999999999999999999 5 776 7999999864
No 337
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.65 E-value=0.0014 Score=65.51 Aligned_cols=44 Identities=9% Similarity=0.203 Sum_probs=33.0
Q ss_pred CCcEEEeCCcEEEEeCCCc--EEEeC----------------CC--eEEEeccEEeccCCCCCc
Q 012165 133 KGIEMIYQDPVTSIDIEKQ--TLITN----------------SG--KLLKYGSLIVATGCTASR 176 (469)
Q Consensus 133 ~~i~~~~~~~v~~id~~~~--~v~~~----------------~g--~~~~yd~lVlAtG~~~~~ 176 (469)
.+++++++..+..+..+++ .|.+. +| +++++|.||+|+|.+|..
T Consensus 265 ~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~ 328 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVP 328 (456)
T ss_dssp EEEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCC
T ss_pred ceEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccccCC
Confidence 6899999988998876543 24443 34 468999999999987754
No 338
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.59 E-value=0.0019 Score=64.99 Aligned_cols=41 Identities=20% Similarity=0.315 Sum_probs=34.6
Q ss_pred CcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCC
Q 012165 244 GVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA 286 (469)
Q Consensus 244 gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~ 286 (469)
|.++++++.|++|+..++ .+ .|.+.+|+++.+|.||++++.
T Consensus 228 ~~~i~~~~~V~~i~~~~~-~v-~v~~~~g~~~~ad~vI~a~~~ 268 (472)
T 1b37_A 228 DPRLQLNKVVREIKYSPG-GV-TVKTEDNSVYSADYVMVSASL 268 (472)
T ss_dssp CTTEESSCCEEEEEECSS-CE-EEEETTSCEEEESEEEECSCH
T ss_pred ccEEEcCCEEEEEEEcCC-cE-EEEECCCCEEEcCEEEEecCH
Confidence 678999999999987544 44 488899999999999999885
No 339
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.58 E-value=0.0016 Score=66.82 Aligned_cols=58 Identities=17% Similarity=0.307 Sum_probs=44.7
Q ss_pred HHcCcEEEcCCeEEEEEeCCCCcEEEEEcCC---CC--EE---eCCEEEEccCCccCCchhhhcCCc
Q 012165 241 QQNGVKFVKGASIKNLEAGSDGRVAAVKLED---GS--TI---DADTIVIGIGAKPTVSPFERVGLN 299 (469)
Q Consensus 241 ~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~---g~--~i---~~D~vi~a~G~~p~~~~~~~~gl~ 299 (469)
++.|+++++++.|++|..+ ++++.+|++.+ |+ ++ .++.||+|+|......+|..+|+.
T Consensus 207 ~~~~~~i~~~~~V~~i~~~-~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGig 272 (546)
T 1kdg_A 207 ARPNFTFKTNVMVSNVVRN-GSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIG 272 (546)
T ss_dssp TCTTEEEECSCCEEEEEEE-TTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTBS
T ss_pred hCCCcEEEeCCEEEEEEEe-CCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCCC
Confidence 3469999999999999864 56788888865 63 34 889999999986655677666664
No 340
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=96.56 E-value=0.0061 Score=59.59 Aligned_cols=54 Identities=24% Similarity=0.412 Sum_probs=38.3
Q ss_pred HHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCchhhhcC
Q 012165 240 YQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVG 297 (469)
Q Consensus 240 l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~g 297 (469)
+++.|++++.++.|++++.++ +.+ .|.+.+| ++.+|.||+|+|.... .+++.++
T Consensus 163 a~~~Gv~i~~~~~V~~i~~~~-~~v-~v~t~~g-~i~a~~VV~A~G~~s~-~l~~~~g 216 (397)
T 2oln_A 163 AQAAGATLRAGETVTELVPDA-DGV-SVTTDRG-TYRAGKVVLACGPYTN-DLLEPLG 216 (397)
T ss_dssp HHHTTCEEEESCCEEEEEEET-TEE-EEEESSC-EEEEEEEEECCGGGHH-HHHGGGT
T ss_pred HHHcCCEEECCCEEEEEEEcC-CeE-EEEECCC-EEEcCEEEEcCCcChH-HHhhhcC
Confidence 345689999999999998643 334 3666665 7999999999998643 3444443
No 341
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.50 E-value=0.0017 Score=65.66 Aligned_cols=83 Identities=17% Similarity=0.197 Sum_probs=59.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHhCCCeEe-----------------ee----------HHHHH---HcCcEEEcCCeEEEE
Q 012165 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTT-----------------RY----------EQLYQ---QNGVKFVKGASIKNL 256 (469)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~v~-----------------~~----------~~~l~---~~gV~~~~~~~v~~i 256 (469)
..+|+|||+|+.|+.+|..|++. .+|+ .. ...+. +.|++++.++.+.++
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l~~~v~~~~~~~v~~i 186 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKLNENTKIYLETSALGV 186 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTCCTTEEEETTEEECCC
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHHhcCCEEEcCCEEEEE
Confidence 35799999999999999999988 7776 00 01222 358999999988888
Q ss_pred EeCCCCcEEEEEcCCCC--EEeCCEEEEccCCccCCc
Q 012165 257 EAGSDGRVAAVKLEDGS--TIDADTIVIGIGAKPTVS 291 (469)
Q Consensus 257 ~~~~~~~v~~v~~~~g~--~i~~D~vi~a~G~~p~~~ 291 (469)
...+ ..+.....++++ .+.+|.+|+|+|..|...
T Consensus 187 ~~~~-~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~ 222 (493)
T 1y56_A 187 FDKG-EYFLVPVVRGDKLIEILAKRVVLATGAIDSTM 222 (493)
T ss_dssp EECS-SSEEEEEEETTEEEEEEESCEEECCCEEECCC
T ss_pred EcCC-cEEEEEEecCCeEEEEECCEEEECCCCCccCC
Confidence 7543 333222224554 689999999999988644
No 342
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=96.48 E-value=0.012 Score=60.75 Aligned_cols=50 Identities=22% Similarity=0.249 Sum_probs=38.3
Q ss_pred HHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEc---CCCC--EEeCCEEEEccCCc
Q 012165 238 QLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL---EDGS--TIDADTIVIGIGAK 287 (469)
Q Consensus 238 ~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~---~~g~--~i~~D~vi~a~G~~ 287 (469)
+.+++.||+++.++.+.++..++++++.+|.. .+|+ .+.++.||+|+|.-
T Consensus 151 ~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 151 QQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGA 205 (588)
T ss_dssp HHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCC
Confidence 33456799999999999998644567767664 4665 58999999999963
No 343
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=96.47 E-value=0.0024 Score=64.70 Aligned_cols=27 Identities=22% Similarity=0.175 Sum_probs=23.8
Q ss_pred CeEEEEcCChHHHHHHHHHHh-CCCeEe
Q 012165 208 KKVVVVGGGYIGMEVAAAAVG-WKLDTT 234 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~-~g~~v~ 234 (469)
-.|+|||+|.+|+-+|..|++ .|.+|+
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~~G~~V~ 38 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQIDGPSWM 38 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCCSCEE
T ss_pred CCEEEECCcHHHHHHHHHHHhhCCCCEE
Confidence 369999999999999999987 488886
No 344
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.35 E-value=0.0016 Score=68.22 Aligned_cols=39 Identities=21% Similarity=0.158 Sum_probs=32.4
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCC-----CCCcEEEEcCCC-CC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGM-----ADGRLCIVSKEA-YA 89 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~-----~~~~V~vie~~~-~~ 89 (469)
+++|+|||||+|||+||..|.+.|. +..+|+|+|+.+ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 4789999999999999999999871 013799999987 54
No 345
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=96.31 E-value=0.0064 Score=63.60 Aligned_cols=51 Identities=18% Similarity=0.191 Sum_probs=35.4
Q ss_pred HHHHHcCc--EEEcCCeEEEEEeCCC--CcEEEEEcC------CC--CEEeCCEEEEccCCcc
Q 012165 238 QLYQQNGV--KFVKGASIKNLEAGSD--GRVAAVKLE------DG--STIDADTIVIGIGAKP 288 (469)
Q Consensus 238 ~~l~~~gV--~~~~~~~v~~i~~~~~--~~v~~v~~~------~g--~~i~~D~vi~a~G~~p 288 (469)
+.+++.|+ ++++++++++++.+++ +....+++. +| +++.+|+||.|.|...
T Consensus 149 ~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 149 ERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARS 211 (639)
T ss_dssp HHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTC
T ss_pred HHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcch
Confidence 34455665 8999999999986542 212245544 46 5799999999999764
No 346
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.29 E-value=0.0012 Score=66.22 Aligned_cols=72 Identities=17% Similarity=0.276 Sum_probs=54.6
Q ss_pred cCCeEEEEcCChHHHHHHHHHHhCC--CeEe----------------------------eeHHHHHHcCcEEEcCCeEEE
Q 012165 206 KAKKVVVVGGGYIGMEVAAAAVGWK--LDTT----------------------------RYEQLYQQNGVKFVKGASIKN 255 (469)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g--~~v~----------------------------~~~~~l~~~gV~~~~~~~v~~ 255 (469)
..++++|||+|+.|+.+|..|.+.+ .+++ .+.+.+++.||+++.++.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~- 83 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVG- 83 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBT-
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEEe-
Confidence 4578999999999999999999988 7776 23455667899999886552
Q ss_pred EEeCCCCcEEEEEcCCCCEEeCCEEEEccCCcc
Q 012165 256 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 288 (469)
Q Consensus 256 i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p 288 (469)
. .|.+++. .+.+|.||+|+|..|
T Consensus 84 ------~---~V~~~~~-~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 84 ------R---DVTVQEL-QDAYHAVVLSYGAED 106 (460)
T ss_dssp ------T---TBCHHHH-HHHSSEEEECCCCCE
T ss_pred ------e---EEEeccc-eEEcCEEEEecCcCC
Confidence 1 1334333 478999999999885
No 347
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.26 E-value=0.0016 Score=66.58 Aligned_cols=59 Identities=14% Similarity=0.178 Sum_probs=42.6
Q ss_pred HHHcCcEEEcCCeEEEEEeCCC--CcEEEEEcC--CCC--EE---eCCEEEEccCCccCCchhhhcCC
Q 012165 240 YQQNGVKFVKGASIKNLEAGSD--GRVAAVKLE--DGS--TI---DADTIVIGIGAKPTVSPFERVGL 298 (469)
Q Consensus 240 l~~~gV~~~~~~~v~~i~~~~~--~~v~~v~~~--~g~--~i---~~D~vi~a~G~~p~~~~~~~~gl 298 (469)
.++.|+++++++.|++|..+++ +++.+|++. +|+ ++ .++.||+|+|.--+..+|..+|+
T Consensus 204 ~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~SGi 271 (536)
T 1ju2_A 204 GNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLSGV 271 (536)
T ss_dssp SCTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHHHTTE
T ss_pred hcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHHHcCC
Confidence 4578999999999999986543 478788774 465 34 57899999997544455555554
No 348
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.22 E-value=0.0025 Score=65.02 Aligned_cols=60 Identities=18% Similarity=0.355 Sum_probs=43.3
Q ss_pred HHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCC---CEEeCCEEEEccCCccCCchhhhcCCc
Q 012165 239 LYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG---STIDADTIVIGIGAKPTVSPFERVGLN 299 (469)
Q Consensus 239 ~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g---~~i~~D~vi~a~G~~p~~~~~~~~gl~ 299 (469)
...+.++.+..++.+.++..+ ++++.+|...+. ..+.++.||+|.|..-...+|..+|+.
T Consensus 220 ~~~r~nl~v~~~~~v~~i~~~-~~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~LLl~SGig 282 (526)
T 3t37_A 220 VRGRKNLTILTGSRVRRLKLE-GNQVRSLEVVGRQGSAEVFADQIVLCAGALESPALLMRSGIG 282 (526)
T ss_dssp HHTCTTEEEECSCEEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHHHHHTTEE
T ss_pred ccCCCCeEEEeCCEEEEEEec-CCeEEEEEEEecCceEEEeecceEEcccccCCcchhhhccCC
Confidence 344678999999999999854 566666665433 357889999999976555666666553
No 349
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.19 E-value=0.0029 Score=65.08 Aligned_cols=58 Identities=17% Similarity=0.225 Sum_probs=40.9
Q ss_pred HHcCcEEEcCCeEEEEEeCC-CCcEEEEEcC--CCC--EEeC-CEEEEccCCccCCchhhhcCC
Q 012165 241 QQNGVKFVKGASIKNLEAGS-DGRVAAVKLE--DGS--TIDA-DTIVIGIGAKPTVSPFERVGL 298 (469)
Q Consensus 241 ~~~gV~~~~~~~v~~i~~~~-~~~v~~v~~~--~g~--~i~~-D~vi~a~G~~p~~~~~~~~gl 298 (469)
++.|+++++++.+++|.-++ ++++++|++. +|+ ++.+ ..||+|.|.-....+|..+|+
T Consensus 217 ~r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL~~SGI 280 (577)
T 3q9t_A 217 NKPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLMLSGI 280 (577)
T ss_dssp SCTTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHHHHTTE
T ss_pred cCCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHHHHcCC
Confidence 45799999999999997643 5678888775 364 4566 569999997644455554443
No 350
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=96.10 E-value=0.019 Score=58.70 Aligned_cols=45 Identities=16% Similarity=0.240 Sum_probs=35.1
Q ss_pred cCcEEEcCCeEEEEEeCCCC------cEEEEEcC---CCC--EEeCCEEEEccCCc
Q 012165 243 NGVKFVKGASIKNLEAGSDG------RVAAVKLE---DGS--TIDADTIVIGIGAK 287 (469)
Q Consensus 243 ~gV~~~~~~~v~~i~~~~~~------~v~~v~~~---~g~--~i~~D~vi~a~G~~ 287 (469)
.||+++.++.+.++..++++ ++.+|.+. +|+ .+.++.||+|+|-.
T Consensus 152 ~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 207 (540)
T 1chu_A 152 PNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGA 207 (540)
T ss_dssp TTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCC
T ss_pred CCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCc
Confidence 68999999999999863334 67666664 564 68999999999954
No 351
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=96.07 E-value=0.03 Score=57.61 Aligned_cols=29 Identities=28% Similarity=0.484 Sum_probs=26.5
Q ss_pred cCCeEEEEcCChHHHHHHHHHHhCCCeEe
Q 012165 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTT 234 (469)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~v~ 234 (469)
....|+|||||.+|+-+|..|+++|.+|.
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~ 59 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTG 59 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEE
Confidence 35689999999999999999999999887
No 352
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=95.88 E-value=0.0099 Score=58.35 Aligned_cols=54 Identities=22% Similarity=0.300 Sum_probs=34.7
Q ss_pred HHcCcEEEcCCeEE---------EEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCccCCchhh-hcCC
Q 012165 241 QQNGVKFVKGASIK---------NLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFE-RVGL 298 (469)
Q Consensus 241 ~~~gV~~~~~~~v~---------~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~-~~gl 298 (469)
++.|++++.+++|+ ++..+ ++.+ .|.+.+| ++.+|.||+|+|.... .+++ .+++
T Consensus 183 ~~~Gv~i~~~~~v~~~~g~~~~~~i~~~-~~~v-~v~~~~g-~i~a~~VV~A~G~~s~-~l~~~~~g~ 246 (405)
T 3c4n_A 183 IGQGAGLLLNTRAELVPGGVRLHRLTVT-NTHQ-IVVHETR-QIRAGVIIVAAGAAGP-ALVEQGLGL 246 (405)
T ss_dssp HTTTCEEECSCEEEEETTEEEEECBCC---------CBCCE-EEEEEEEEECCGGGHH-HHHHHHHCC
T ss_pred HHCCCEEEcCCEEEeccccccccceEee-CCeE-EEEECCc-EEECCEEEECCCccHH-HHHHHhcCC
Confidence 34689999999888 77643 3444 5666666 7999999999998653 3444 4443
No 353
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=95.87 E-value=0.0048 Score=63.50 Aligned_cols=60 Identities=17% Similarity=0.359 Sum_probs=42.8
Q ss_pred HHHHcCcEEEcCCeEEEEEeCC---CCcEEEEEcC--CCC--EEeCC-EEEEccCCccCCchhhhcCC
Q 012165 239 LYQQNGVKFVKGASIKNLEAGS---DGRVAAVKLE--DGS--TIDAD-TIVIGIGAKPTVSPFERVGL 298 (469)
Q Consensus 239 ~l~~~gV~~~~~~~v~~i~~~~---~~~v~~v~~~--~g~--~i~~D-~vi~a~G~~p~~~~~~~~gl 298 (469)
.+++.|+++++++.|++|.-++ ++++++|++. +|+ ++.+. .||+|.|.--...+|.-+|+
T Consensus 236 ~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~lSGI 303 (583)
T 3qvp_A 236 NYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGI 303 (583)
T ss_dssp TTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHHTTB
T ss_pred hhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHHcCC
Confidence 3456899999999999997543 5678888874 564 46676 69999997644455544443
No 354
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=95.86 E-value=0.028 Score=56.86 Aligned_cols=47 Identities=13% Similarity=0.154 Sum_probs=35.7
Q ss_pred HHcCcEEEcCCeEEEEEeCCCCcEEEEEc---CCCC--EEeCCEEEEccCCccC
Q 012165 241 QQNGVKFVKGASIKNLEAGSDGRVAAVKL---EDGS--TIDADTIVIGIGAKPT 289 (469)
Q Consensus 241 ~~~gV~~~~~~~v~~i~~~~~~~v~~v~~---~~g~--~i~~D~vi~a~G~~p~ 289 (469)
++.|++++.+++|+++..++ .+..|.+ .+|+ ++.+|.||+|+|....
T Consensus 160 ~~~Gv~i~~~~~V~~l~~~~--~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 160 VRKGGEVLTRTRATSARREN--GLWIVEAEDIDTGKKYSWQARGLVNATGPWVK 211 (501)
T ss_dssp HHTTCEEECSEEEEEEEEET--TEEEEEEEETTTCCEEEEEESCEEECCGGGHH
T ss_pred HHcCCEEEcCcEEEEEEEeC--CEEEEEEEECCCCCEEEEECCEEEECCChhHH
Confidence 34588999999999998643 4456666 3565 7999999999998653
No 355
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=95.86 E-value=0.019 Score=59.41 Aligned_cols=45 Identities=20% Similarity=0.375 Sum_probs=34.7
Q ss_pred HcC-cEEEcCCeEEEEEeCCCCcEEEEE---cCCCC--EEeCCEEEEccCCc
Q 012165 242 QNG-VKFVKGASIKNLEAGSDGRVAAVK---LEDGS--TIDADTIVIGIGAK 287 (469)
Q Consensus 242 ~~g-V~~~~~~~v~~i~~~~~~~v~~v~---~~~g~--~i~~D~vi~a~G~~ 287 (469)
+.| |+++.++.+.++..+ ++++.++. +.+|+ .+.++.||+|+|..
T Consensus 146 ~~gnv~i~~~~~v~~l~~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 196 (602)
T 1kf6_A 146 QFPQIQRFDEHFVLDILVD-DGHVRGLVAMNMMEGTLVQIRANAVVMATGGA 196 (602)
T ss_dssp TCTTEEEEETEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSCEEECCCCC
T ss_pred hCCCcEEEeCCEEEEEEEe-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCCC
Confidence 456 999999999999754 56665554 36776 68999999999963
No 356
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=95.85 E-value=0.0062 Score=61.74 Aligned_cols=59 Identities=19% Similarity=0.264 Sum_probs=43.2
Q ss_pred HHHHc-CcEEEcCCeEEEEEeCCCC-cEEEEEcC--CC-----CEEeCCEEEEccCCccCCchhhhcC
Q 012165 239 LYQQN-GVKFVKGASIKNLEAGSDG-RVAAVKLE--DG-----STIDADTIVIGIGAKPTVSPFERVG 297 (469)
Q Consensus 239 ~l~~~-gV~~~~~~~v~~i~~~~~~-~v~~v~~~--~g-----~~i~~D~vi~a~G~~p~~~~~~~~g 297 (469)
..+++ ++++++++.|++|..++++ ++.+|++. +| .++.++.||+|.|.-....+|..+|
T Consensus 230 ~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~lL~~Sg 297 (504)
T 1n4w_A 230 AALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELLVRAR 297 (504)
T ss_dssp HHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHHHHHHH
T ss_pred HHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHHHHhcc
Confidence 33445 5999999999999865434 67888774 56 3688999999999864445655554
No 357
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=95.81 E-value=0.031 Score=57.21 Aligned_cols=27 Identities=26% Similarity=0.517 Sum_probs=24.9
Q ss_pred CeEEEEcCChHHHHHHHHHHhCCCeEe
Q 012165 208 KKVVVVGGGYIGMEVAAAAVGWKLDTT 234 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~v~ 234 (469)
.+|+|||+|++|+-+|..|++.|.++.
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~ 53 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHL 53 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEE
Confidence 479999999999999999999998876
No 358
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=95.79 E-value=0.026 Score=56.61 Aligned_cols=47 Identities=21% Similarity=0.461 Sum_probs=35.0
Q ss_pred HHcCcEEEcCCeEEEEEeCCCCcEEEEEcC-CCCEEeCCEEEEccCCccC
Q 012165 241 QQNGVKFVKGASIKNLEAGSDGRVAAVKLE-DGSTIDADTIVIGIGAKPT 289 (469)
Q Consensus 241 ~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~-~g~~i~~D~vi~a~G~~p~ 289 (469)
++.||+++.++.+ ++..+ ++.+.++... ++.++.+|.||+|+|..+.
T Consensus 130 ~~~gv~i~~~~~v-~l~~~-~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 130 REEGIPIIEDRLV-EIRVK-DGKVTGFVTEKRGLVEDVDKLVLATGGYSY 177 (472)
T ss_dssp HHTTCCEECCCEE-EEEEE-TTEEEEEEETTTEEECCCSEEEECCCCCGG
T ss_pred HhCCCEEEECcEE-EEEEe-CCEEEEEEEEeCCCeEEeeeEEECCCCCcc
Confidence 5679999999999 88754 5666666543 2335789999999998764
No 359
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=95.78 E-value=0.0078 Score=61.06 Aligned_cols=57 Identities=9% Similarity=0.162 Sum_probs=42.1
Q ss_pred HHcCcEEEcCCeEEEEEeCCCC-cEEEEEcC--CC-----CEEeCCEEEEccCCccCCchhhhcC
Q 012165 241 QQNGVKFVKGASIKNLEAGSDG-RVAAVKLE--DG-----STIDADTIVIGIGAKPTVSPFERVG 297 (469)
Q Consensus 241 ~~~gV~~~~~~~v~~i~~~~~~-~v~~v~~~--~g-----~~i~~D~vi~a~G~~p~~~~~~~~g 297 (469)
+..++++++++.|++|..++++ ++.+|++. +| .++.++.||+|.|.--...+|..+|
T Consensus 238 ~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~lL~~Sg 302 (507)
T 1coy_A 238 ATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLLVSMK 302 (507)
T ss_dssp HTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHHHHHH
T ss_pred hcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHHHHhcc
Confidence 3446999999999999875444 67788774 55 3688999999999764445655554
No 360
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=95.70 E-value=0.033 Score=57.75 Aligned_cols=46 Identities=22% Similarity=0.267 Sum_probs=35.6
Q ss_pred HcCcEEEcCCeEEEEEeCCCCcEEEEEc---CCCC--EEeCCEEEEccCCcc
Q 012165 242 QNGVKFVKGASIKNLEAGSDGRVAAVKL---EDGS--TIDADTIVIGIGAKP 288 (469)
Q Consensus 242 ~~gV~~~~~~~v~~i~~~~~~~v~~v~~---~~g~--~i~~D~vi~a~G~~p 288 (469)
+.||+++.++.+.++..+ ++++.+|.. .+|+ .+.++.||+|+|-..
T Consensus 167 ~~gv~i~~~~~v~~Li~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 167 RYDTSYFVEYFALDLLME-NGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp TSCCEEEETEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred hCCCEEEEceEEEEEEEE-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 468999999999998753 567767665 4675 689999999999643
No 361
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=95.55 E-value=0.009 Score=61.72 Aligned_cols=59 Identities=14% Similarity=0.281 Sum_probs=43.2
Q ss_pred HHHcCcEEEcCCeEEEEEeCCC---CcEEEEEcC--CCC--EEeC-CEEEEccCCccCCchhhhcCC
Q 012165 240 YQQNGVKFVKGASIKNLEAGSD---GRVAAVKLE--DGS--TIDA-DTIVIGIGAKPTVSPFERVGL 298 (469)
Q Consensus 240 l~~~gV~~~~~~~v~~i~~~~~---~~v~~v~~~--~g~--~i~~-D~vi~a~G~~p~~~~~~~~gl 298 (469)
.++.|+++++++.|++|..+++ +++.+|+.. +|+ .+.+ +.||+|+|.-.+..+|..+|+
T Consensus 241 ~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~~SGI 307 (587)
T 1gpe_A 241 YQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGI 307 (587)
T ss_dssp TTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHTTE
T ss_pred hcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHHhCCC
Confidence 3467999999999999975432 467788764 564 5678 899999998755556655554
No 362
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=95.53 E-value=0.03 Score=58.70 Aligned_cols=27 Identities=26% Similarity=0.315 Sum_probs=24.7
Q ss_pred CeEEEEcCChHHHHHHHHHHh-----CCCeEe
Q 012165 208 KKVVVVGGGYIGMEVAAAAVG-----WKLDTT 234 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~-----~g~~v~ 234 (469)
..|+|||+|+.|+-+|..|++ .|.++.
T Consensus 9 ~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~ 40 (665)
T 1pn0_A 9 CDVLIVGAGPAGLMAARVLSEYVRQKPDLKVR 40 (665)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEE
T ss_pred CcEEEECcCHHHHHHHHHHhccccccCCCCEE
Confidence 369999999999999999999 898876
No 363
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=95.51 E-value=0.0087 Score=61.28 Aligned_cols=58 Identities=24% Similarity=0.396 Sum_probs=42.8
Q ss_pred HHcCcEEEcCCeEEEEEeCCCCcEEEEEcCC---CC--EEeCC-EEEEccCCccCCchhhhcCC
Q 012165 241 QQNGVKFVKGASIKNLEAGSDGRVAAVKLED---GS--TIDAD-TIVIGIGAKPTVSPFERVGL 298 (469)
Q Consensus 241 ~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~---g~--~i~~D-~vi~a~G~~p~~~~~~~~gl 298 (469)
++.|+++++++.|++|..++++++.+|++.+ |+ ++.++ .||+|+|.--...+|..+|+
T Consensus 220 ~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~~SGi 283 (546)
T 2jbv_A 220 EQENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLMLSGI 283 (546)
T ss_dssp TCTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHHHTTE
T ss_pred cCCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhhhhcCC
Confidence 4679999999999999865437787887744 53 68898 99999997433345555554
No 364
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=95.40 E-value=0.0061 Score=62.53 Aligned_cols=63 Identities=16% Similarity=0.253 Sum_probs=42.4
Q ss_pred eHHHHHHcCcEEEcCCeEEEEEeC---CC-CcEEEEEcCC--C-C--EEeC-CEEEEccCCccCCchhhhcCC
Q 012165 236 YEQLYQQNGVKFVKGASIKNLEAG---SD-GRVAAVKLED--G-S--TIDA-DTIVIGIGAKPTVSPFERVGL 298 (469)
Q Consensus 236 ~~~~l~~~gV~~~~~~~v~~i~~~---~~-~~v~~v~~~~--g-~--~i~~-D~vi~a~G~~p~~~~~~~~gl 298 (469)
+...+++.++++++++.|++|.-+ ++ +++++|++.+ | + ++.+ ..||+|.|.--...+|.-+|+
T Consensus 214 L~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~lSGI 286 (566)
T 3fim_B 214 LRPAQSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQLSGI 286 (566)
T ss_dssp HHHHTTCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHHHTTE
T ss_pred hhhhccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHHhcCC
Confidence 344456789999999999999854 12 5677787653 4 3 4666 679999996533345554444
No 365
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=95.31 E-value=0.08 Score=55.32 Aligned_cols=48 Identities=19% Similarity=0.187 Sum_probs=36.6
Q ss_pred HHHcCcEEEcCCeEEEEEeCCCCcEEEEEc---CCCC--EEeCCEEEEccCCcc
Q 012165 240 YQQNGVKFVKGASIKNLEAGSDGRVAAVKL---EDGS--TIDADTIVIGIGAKP 288 (469)
Q Consensus 240 l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~---~~g~--~i~~D~vi~a~G~~p 288 (469)
+++.||+++.++.+.++..+ ++++.+|.. .+|+ .+.++.||+|+|--.
T Consensus 168 a~~~gv~i~~~~~v~~L~~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 168 CLKLGVSIQDRKEAIALIHQ-DGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHTCEEECSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHhCCCEEEECcEEEEEEec-CCEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 34568999999999999753 566666654 5675 489999999999643
No 366
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.15 E-value=0.025 Score=46.37 Aligned_cols=37 Identities=11% Similarity=0.271 Sum_probs=32.2
Q ss_pred CCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
...+.+|+|+|.|.-|...|..|.+.|+ +|+++|.++
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~~g~---~v~vid~~~ 40 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLASDI---PLVVIETSR 40 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHHTTC---CEEEEESCH
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEECCH
Confidence 3445789999999999999999999987 799999764
No 367
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=95.01 E-value=0.075 Score=56.56 Aligned_cols=41 Identities=17% Similarity=0.366 Sum_probs=34.4
Q ss_pred CcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCC
Q 012165 244 GVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA 286 (469)
Q Consensus 244 gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~ 286 (469)
|+++++++.|++|+.++++ + .|++.+|+++.+|.||+|++.
T Consensus 543 gl~I~l~t~V~~I~~~~~~-v-~V~~~~G~~i~Ad~VIvA~P~ 583 (776)
T 4gut_A 543 GLDIQLKSPVQCIDYSGDE-V-QVTTTDGTGYSAQKVLVTVPL 583 (776)
T ss_dssp TSCEESSCCEEEEECSSSS-E-EEEETTCCEEEESEEEECCCH
T ss_pred CCcEEcCCeeEEEEEcCCE-E-EEEECCCcEEEcCEEEECCCH
Confidence 7889999999999865444 4 588889989999999999864
No 368
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=94.96 E-value=0.064 Score=53.31 Aligned_cols=28 Identities=36% Similarity=0.478 Sum_probs=25.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhCC------CeEe
Q 012165 207 AKKVVVVGGGYIGMEVAAAAVGWK------LDTT 234 (469)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g------~~v~ 234 (469)
.++|+|||+|.+|+-+|..|++.| .+|+
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~ 38 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELT 38 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEE
Confidence 358999999999999999999998 7876
No 369
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=94.88 E-value=0.026 Score=57.03 Aligned_cols=50 Identities=18% Similarity=0.240 Sum_probs=35.1
Q ss_pred HcCcEEEcCCeEEEEEeCCCC------cEEEEEcCCC-----CEEeCCEEEEccCCccCCc
Q 012165 242 QNGVKFVKGASIKNLEAGSDG------RVAAVKLEDG-----STIDADTIVIGIGAKPTVS 291 (469)
Q Consensus 242 ~~gV~~~~~~~v~~i~~~~~~------~v~~v~~~~g-----~~i~~D~vi~a~G~~p~~~ 291 (469)
+.+..++++++|++++..+.+ ....|+..++ +++.++.||+|+|..|..+
T Consensus 157 ~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~P~iP 217 (501)
T 4b63_A 157 QFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGTAKMP 217 (501)
T ss_dssp TTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCEECCC
T ss_pred HcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCCCCCC
Confidence 345668899999999864322 1234555443 3688999999999988755
No 370
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=94.82 E-value=0.095 Score=54.66 Aligned_cols=46 Identities=15% Similarity=0.216 Sum_probs=35.2
Q ss_pred Hc-Cc-EEEcCCeEEEEEeCCC--CcEEEEEc---CCCC--EEeCCEEEEccCCc
Q 012165 242 QN-GV-KFVKGASIKNLEAGSD--GRVAAVKL---EDGS--TIDADTIVIGIGAK 287 (469)
Q Consensus 242 ~~-gV-~~~~~~~v~~i~~~~~--~~v~~v~~---~~g~--~i~~D~vi~a~G~~ 287 (469)
+. || +++.++.+.++..+++ +++.+|.. .+|+ .+.++.||+|+|-.
T Consensus 163 ~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~ 217 (643)
T 1jnr_A 163 MAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGA 217 (643)
T ss_dssp HHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCB
T ss_pred hcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcc
Confidence 44 89 9999999999986433 27777653 5665 68999999999964
No 371
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.62 E-value=0.017 Score=57.52 Aligned_cols=72 Identities=24% Similarity=0.197 Sum_probs=54.7
Q ss_pred cCCeEEEEcCChHHHHHHHHHHhCCCeEe----------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEE
Q 012165 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTT----------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTI 275 (469)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~v~----------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i 275 (469)
.++++.|+|.|.+|+.+|..|.++|.+|+ ...+.|++.||+++.+....++ +.+
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~------------~~~---- 71 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLEL------------LDE---- 71 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGG------------GGS----
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHh------------hcC----
Confidence 57899999999999999999999999998 1235688889998876421100 010
Q ss_pred eCCEEEEccCCccCCchh
Q 012165 276 DADTIVIGIGAKPTVSPF 293 (469)
Q Consensus 276 ~~D~vi~a~G~~p~~~~~ 293 (469)
.+|+||+++|..++.+.+
T Consensus 72 ~~d~vv~spgi~~~~p~~ 89 (451)
T 3lk7_A 72 DFCYMIKNPGIPYNNPMV 89 (451)
T ss_dssp CEEEEEECTTSCTTSHHH
T ss_pred CCCEEEECCcCCCCChhH
Confidence 279999999998887653
No 372
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.61 E-value=0.046 Score=45.42 Aligned_cols=34 Identities=15% Similarity=0.256 Sum_probs=30.5
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~ 86 (469)
.+.+++|+|+|.-|...+..|.+.|+ +|++++++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~---~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQ---NVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTC---CEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC---CEEEEECC
Confidence 35689999999999999999999987 79999975
No 373
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.44 E-value=0.037 Score=45.20 Aligned_cols=34 Identities=21% Similarity=0.364 Sum_probs=30.3
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
+.+|+|+|+|.-|...|..|.+.|+ +|+++|.++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~---~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGK---KVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC---eEEEEECCH
Confidence 4689999999999999999999987 799998653
No 374
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=94.38 E-value=0.051 Score=54.24 Aligned_cols=41 Identities=15% Similarity=0.296 Sum_probs=36.3
Q ss_pred CCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC
Q 012165 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY 91 (469)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~ 91 (469)
++..+||+|||+|.+|+++|..|++.|. +|+++|++++.+.
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~---~v~~~e~~~~~Gg 57 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGK---KILVLDRNPYYGG 57 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCG
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCC---cEEEEeccCCCCC
Confidence 4456899999999999999999999997 7999999987653
No 375
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.37 E-value=0.035 Score=52.71 Aligned_cols=73 Identities=25% Similarity=0.290 Sum_probs=54.5
Q ss_pred cCCeEEEEcCChHHHH-HHHHHHhCCCeEe--------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEe
Q 012165 206 KAKKVVVVGGGYIGME-VAAAAVGWKLDTT--------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTID 276 (469)
Q Consensus 206 ~~~~vvVvG~G~~g~e-~A~~l~~~g~~v~--------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~ 276 (469)
..+++.+||.|.+|+. +|..|.++|.+|+ ...+.|++.|++++.+..... +.. ..
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~-------------l~~---~~ 66 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQ-------------LDE---FK 66 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGG-------------GGS---CC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHH-------------cCC---CC
Confidence 3578999999999996 8899999999998 234678888999876532100 110 24
Q ss_pred CCEEEEccCCccCCchhh
Q 012165 277 ADTIVIGIGAKPTVSPFE 294 (469)
Q Consensus 277 ~D~vi~a~G~~p~~~~~~ 294 (469)
+|+||.++|..|+.+.+.
T Consensus 67 ~d~vV~Spgi~~~~p~~~ 84 (326)
T 3eag_A 67 ADVYVIGNVAKRGMDVVE 84 (326)
T ss_dssp CSEEEECTTCCTTCHHHH
T ss_pred CCEEEECCCcCCCCHHHH
Confidence 899999999998876543
No 376
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.34 E-value=0.047 Score=45.49 Aligned_cols=37 Identities=22% Similarity=0.338 Sum_probs=31.5
Q ss_pred CCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
.....+|+|+|+|.-|...|..|++.|+ +|+++++++
T Consensus 16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~---~V~vid~~~ 52 (155)
T 2g1u_A 16 KQKSKYIVIFGCGRLGSLIANLASSSGH---SVVVVDKNE 52 (155)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCG
T ss_pred ccCCCcEEEECCCHHHHHHHHHHHhCCC---eEEEEECCH
Confidence 3445789999999999999999999987 799998764
No 377
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=94.14 E-value=0.069 Score=52.73 Aligned_cols=52 Identities=27% Similarity=0.338 Sum_probs=44.0
Q ss_pred eHHHHHHcCcEEEcCC---eEEEEEeCCCCcEEEEEcCCCCEEeCCEEEEccCCcc
Q 012165 236 YEQLYQQNGVKFVKGA---SIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 288 (469)
Q Consensus 236 ~~~~l~~~gV~~~~~~---~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p 288 (469)
+.+.+++.|+++++++ .|+++... ++.+.+|.+.+|+++.+|.||+|+|...
T Consensus 167 L~~~a~~~Gv~i~~~t~~~~V~~i~~~-~~~v~gV~t~~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 167 AAREAQRMGVKFVTGTPQGRVVTLIFE-NNDVKGAVTADGKIWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHTTCEEEESTTTTCEEEEEEE-TTEEEEEEETTTEEEECSEEEECCGGGG
T ss_pred HHHHHHhcCCEEEeCCcCceEEEEEec-CCeEEEEEECCCCEEECCEEEECCCCCh
Confidence 4456778899999999 99999864 5677779999998899999999999764
No 378
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.83 E-value=0.072 Score=47.32 Aligned_cols=99 Identities=15% Similarity=0.219 Sum_probs=61.8
Q ss_pred cCCeEEEEcCChHHHHHHHHHHhCCCeEe--------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeC
Q 012165 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTT--------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDA 277 (469)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~v~--------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~ 277 (469)
.+++++|||||.+|...+..|.+.|.+++ .+.++.++.+++++... + ..+.--.+
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~----~-------------~~~dL~~a 92 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKK----V-------------GEEDLLNV 92 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSC----C-------------CGGGSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECC----C-------------CHhHhCCC
Confidence 57999999999999999999999999988 23444445556665331 0 11111248
Q ss_pred CEEEEccCCccCCchhhhcCCcccCCCEEeC---C-CCCC-CCCceEEecccc
Q 012165 278 DTIVIGIGAKPTVSPFERVGLNSSVGGIQVD---G-QFRT-RMPGIFAIGDVA 325 (469)
Q Consensus 278 D~vi~a~G~~p~~~~~~~~gl~~~~g~i~Vd---~-~~~t-~~~~Vfa~GD~a 325 (469)
|+||.|||.......+... .. .++.|| . .+.+ ..|-++--||+.
T Consensus 93 dLVIaAT~d~~~N~~I~~~---ak-~gi~VNvvD~p~~~~f~~Paiv~rg~l~ 141 (223)
T 3dfz_A 93 FFIVVATNDQAVNKFVKQH---IK-NDQLVNMASSFSDGNIQIPAQFSRGRLS 141 (223)
T ss_dssp SEEEECCCCTHHHHHHHHH---SC-TTCEEEC-----CCSEECCEEEEETTEE
T ss_pred CEEEECCCCHHHHHHHHHH---Hh-CCCEEEEeCCcccCeEEEeeEEEeCCEE
Confidence 9999999876543333222 11 244443 2 2222 567777777765
No 379
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=93.79 E-value=0.072 Score=55.07 Aligned_cols=55 Identities=15% Similarity=0.109 Sum_probs=45.8
Q ss_pred eeHHHHHHcCcEEEcCCeEEEEEeCCC-CcEEEEEcCCCCEEeCCEEEEccCCccC
Q 012165 235 RYEQLYQQNGVKFVKGASIKNLEAGSD-GRVAAVKLEDGSTIDADTIVIGIGAKPT 289 (469)
Q Consensus 235 ~~~~~l~~~gV~~~~~~~v~~i~~~~~-~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 289 (469)
.+.+.++..|.++++++.|++|..+++ +++.+|.+.+|+++.||.||......|.
T Consensus 383 aL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~lp~ 438 (650)
T 1vg0_A 383 CFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSE 438 (650)
T ss_dssp HHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGBCT
T ss_pred HHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhcCH
Confidence 556778899999999999999976543 7788888888999999999997776664
No 380
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=93.73 E-value=0.14 Score=53.53 Aligned_cols=43 Identities=16% Similarity=0.253 Sum_probs=32.7
Q ss_pred CcEEEcCCeEEEEEeCCC--CcEEEEEc---CCCC--EEeCCEEEEccCC
Q 012165 244 GVKFVKGASIKNLEAGSD--GRVAAVKL---EDGS--TIDADTIVIGIGA 286 (469)
Q Consensus 244 gV~~~~~~~v~~i~~~~~--~~v~~v~~---~~g~--~i~~D~vi~a~G~ 286 (469)
||+++.++.+.++..+++ +++.+|.. .+|+ .+.++.||+|+|-
T Consensus 182 gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG 231 (662)
T 3gyx_A 182 QDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGG 231 (662)
T ss_dssp TTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred CcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCc
Confidence 899999888888775533 37777754 4554 5899999999994
No 381
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=93.64 E-value=0.062 Score=41.97 Aligned_cols=33 Identities=12% Similarity=0.286 Sum_probs=28.9
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcC-CCCCcEEEEcCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHG-MADGRLCIVSKE 86 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g-~~~~~V~vie~~ 86 (469)
+.+|+|+|+|..|..++..|.+.| + +|+++++.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~---~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNY---SVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSE---EEEEEESC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCc---eEEEEeCC
Confidence 468999999999999999999998 5 78888764
No 382
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.22 E-value=0.087 Score=46.77 Aligned_cols=37 Identities=24% Similarity=0.508 Sum_probs=32.4
Q ss_pred CCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
....++|+|||||..|...+..|.+.|. +|+|++++.
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA---~VtVvap~~ 64 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGA---AITVVAPTV 64 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCC---CEEEECSSC
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCC---EEEEECCCC
Confidence 3566899999999999999999999986 799999753
No 383
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=92.86 E-value=0.11 Score=41.88 Aligned_cols=32 Identities=19% Similarity=0.344 Sum_probs=28.6
Q ss_pred CcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 012165 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (469)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~ 86 (469)
.+|+|||+|.-|...|..|.+.|+ +|++++++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~---~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGH---DIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---EEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC---eEEEEECC
Confidence 479999999999999999999886 79998864
No 384
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=92.59 E-value=0.12 Score=41.97 Aligned_cols=33 Identities=21% Similarity=0.429 Sum_probs=29.3
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~ 86 (469)
+++|+|+|+|.-|...+..|.+.|+ +|++++..
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~---~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGH---EVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC---CCEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC---EEEEEeCC
Confidence 4679999999999999999999986 68888865
No 385
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=92.13 E-value=0.15 Score=48.88 Aligned_cols=37 Identities=27% Similarity=0.286 Sum_probs=32.9
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~ 90 (469)
|++|+|||||..|..++..+++.|+ ++.++|.++..+
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~---~vv~vd~~~~~~ 37 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGM---KVVLVDKNPQAL 37 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCTTCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC---EEEEEeCCCCCh
Confidence 5799999999999999999999998 799999876543
No 386
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=92.02 E-value=0.44 Score=44.83 Aligned_cols=81 Identities=14% Similarity=0.121 Sum_probs=52.8
Q ss_pred CeEEEEcCChHHHHHHHHHHhCCCeEeee----HHHHHHcCcEEEc--CCeEEEEEeCCCCcEEEEEcCCC-CEE-eCCE
Q 012165 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTRY----EQLYQQNGVKFVK--GASIKNLEAGSDGRVAAVKLEDG-STI-DADT 279 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~v~~~----~~~l~~~gV~~~~--~~~v~~i~~~~~~~v~~v~~~~g-~~i-~~D~ 279 (469)
.+|.|||+|.+|.-+|..|++.|.+|+.+ .+.+++.|+.+.. .... .+.+ + .+. .+- +.. .+|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~~~i~~~Gl~~~~~~~g~~-~~~~-----~-~~~-~~~~~~~~~~Dl 74 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSDYETVKAKGIRIRSATLGDY-TFRP-----A-AVV-RSAAELETKPDC 74 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTTHHHHHHHCEEEEETTTCCE-EECC-----S-CEE-SCGGGCSSCCSE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCChHHHHHhCCcEEeecCCCcE-EEee-----e-eeE-CCHHHcCCCCCE
Confidence 47999999999999999999999998821 3667778876653 1111 1100 0 111 222 222 6999
Q ss_pred EEEccCCccCCchhhhc
Q 012165 280 IVIGIGAKPTVSPFERV 296 (469)
Q Consensus 280 vi~a~G~~p~~~~~~~~ 296 (469)
||+++......+.++.+
T Consensus 75 VilavK~~~~~~~l~~l 91 (320)
T 3i83_A 75 TLLCIKVVEGADRVGLL 91 (320)
T ss_dssp EEECCCCCTTCCHHHHH
T ss_pred EEEecCCCChHHHHHHH
Confidence 99998877665555543
No 387
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.94 E-value=0.16 Score=43.35 Aligned_cols=36 Identities=14% Similarity=0.091 Sum_probs=31.0
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHc-CCCCCcEEEEcCCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEH-GMADGRLCIVSKEA 87 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~-g~~~~~V~vie~~~ 87 (469)
....+|+|+|.|.-|...|..|.+. |+ +|+++|.++
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~---~V~vid~~~ 73 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGK---ISLGIEIRE 73 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCS---CEEEEESCH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCC---eEEEEECCH
Confidence 3356899999999999999999998 87 699998653
No 388
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=91.86 E-value=0.12 Score=46.63 Aligned_cols=29 Identities=17% Similarity=0.376 Sum_probs=26.2
Q ss_pred eEEEEcCChHHHHHHHHHHhCCCeEeeeH
Q 012165 209 KVVVVGGGYIGMEVAAAAVGWKLDTTRYE 237 (469)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g~~v~~~~ 237 (469)
.|+|||+|++|+.+|..|++.|.+|+.++
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEE
Confidence 59999999999999999999999998443
No 389
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=91.83 E-value=0.13 Score=51.02 Aligned_cols=35 Identities=17% Similarity=0.281 Sum_probs=30.8
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (469)
.++|+|||.|.+|+++|+.|.++|+ +|++.|....
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~---~v~~~D~~~~ 39 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGV---TPRVMDTRMT 39 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTC---CCEEEESSSS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCC---EEEEEECCCC
Confidence 4689999999999999999999998 7999887653
No 390
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=91.82 E-value=0.096 Score=52.75 Aligned_cols=70 Identities=16% Similarity=0.215 Sum_probs=53.4
Q ss_pred hcCCeEEEEcCChHHHH-HHHHHHhCCCeEe-------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEe
Q 012165 205 EKAKKVVVVGGGYIGME-VAAAAVGWKLDTT-------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTID 276 (469)
Q Consensus 205 ~~~~~vvVvG~G~~g~e-~A~~l~~~g~~v~-------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~ 276 (469)
...+++.|||-|-+|+. +|..|.++|.+|+ ...+.|++.|++++.+... + . + ..
T Consensus 20 ~~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~-------~-~-----~-----~~ 81 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGAQIYFHHRP-------E-N-----V-----LD 81 (494)
T ss_dssp --CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSCCG-------G-G-----G-----TT
T ss_pred ccCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHCCCEEECCCCH-------H-H-----c-----CC
Confidence 34689999999999996 8999999999998 3346688899998876311 0 0 1 13
Q ss_pred CCEEEEccCCccCCch
Q 012165 277 ADTIVIGIGAKPTVSP 292 (469)
Q Consensus 277 ~D~vi~a~G~~p~~~~ 292 (469)
+|+||+++|..++.+.
T Consensus 82 ~d~vV~Spgi~~~~p~ 97 (494)
T 4hv4_A 82 ASVVVVSTAISADNPE 97 (494)
T ss_dssp CSEEEECTTSCTTCHH
T ss_pred CCEEEECCCCCCCCHH
Confidence 8999999999887654
No 391
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=91.53 E-value=0.092 Score=48.17 Aligned_cols=36 Identities=19% Similarity=0.443 Sum_probs=31.9
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
...++|+|||||-.|...+..|.+.|. +|+||+++.
T Consensus 11 l~~k~VLVVGgG~va~rka~~Ll~~Ga---~VtViap~~ 46 (274)
T 1kyq_A 11 LKDKRILLIGGGEVGLTRLYKLMPTGC---KLTLVSPDL 46 (274)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGGTC---EEEEEEEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHHhCCC---EEEEEcCCC
Confidence 345789999999999999999999986 799999764
No 392
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=91.27 E-value=0.18 Score=50.02 Aligned_cols=132 Identities=13% Similarity=0.169 Sum_probs=75.4
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccCCCCCCCCHh
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 128 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (469)
...++|+|||.|.+|+++|..|+++|+ +|++.|..... . ....+
T Consensus 7 ~~~k~v~viG~G~sG~s~A~~l~~~G~---~V~~~D~~~~~-------------------~--------------~~~~~ 50 (451)
T 3lk7_A 7 FENKKVLVLGLARSGEAAARLLAKLGA---IVTVNDGKPFD-------------------E--------------NPTAQ 50 (451)
T ss_dssp TTTCEEEEECCTTTHHHHHHHHHHTTC---EEEEEESSCGG-------------------G--------------CHHHH
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCC---EEEEEeCCccc-------------------C--------------ChHHH
Confidence 346899999999999999999999998 79998865420 0 01234
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCCCCcCCCCCCCCcCcEEEecCHHHHHHHHHhhhcCC
Q 012165 129 WYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAK 208 (469)
Q Consensus 129 ~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~ 208 (469)
.+++.|+++..+... ... + ++ .+|.||+++|..+. .|.+....-.|+..+.. .+-+. .+.+.+
T Consensus 51 ~L~~~gi~~~~g~~~-----~~~---~-~~---~~d~vv~spgi~~~-~p~~~~a~~~gi~v~~~---~e~~~-~~~~~~ 113 (451)
T 3lk7_A 51 SLLEEGIKVVCGSHP-----LEL---L-DE---DFCYMIKNPGIPYN-NPMVKKALEKQIPVLTE---VELAY-LVSESQ 113 (451)
T ss_dssp HHHHTTCEEEESCCC-----GGG---G-GS---CEEEEEECTTSCTT-SHHHHHHHHTTCCEECH---HHHHH-HHCCSE
T ss_pred HHHhCCCEEEECCCh-----HHh---h-cC---CCCEEEECCcCCCC-ChhHHHHHHCCCcEEeH---HHHHH-HhcCCC
Confidence 567789998876431 100 0 00 27999999997654 23221111123333322 22222 223445
Q ss_pred eEEEEcC-ChHH--HHHHHHHHhCCCeE
Q 012165 209 KVVVVGG-GYIG--MEVAAAAVGWKLDT 233 (469)
Q Consensus 209 ~vvVvG~-G~~g--~e~A~~l~~~g~~v 233 (469)
.|.|-|+ |-+- --++..|...|.++
T Consensus 114 ~IaVTGTnGKTTTt~ml~~iL~~~g~~~ 141 (451)
T 3lk7_A 114 LIGITGSNGKTTTTTMIAEVLNAGGQRG 141 (451)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHHTTCCE
T ss_pred EEEEECCCCHHHHHHHHHHHHHhcCCCE
Confidence 5666663 4332 23444555566544
No 393
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=90.68 E-value=0.29 Score=45.62 Aligned_cols=38 Identities=16% Similarity=0.236 Sum_probs=31.8
Q ss_pred CCCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 47 FANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 47 ~~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
|.+.+++|.|||+|.-|...|..|++.|+ +|+++|.++
T Consensus 11 ~~~~~~~I~VIG~G~mG~~iA~~la~~G~---~V~~~d~~~ 48 (302)
T 1f0y_A 11 KKIIVKHVTVIGGGLMGAGIAQVAAATGH---TVVLVDQTE 48 (302)
T ss_dssp -CCCCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCH
T ss_pred ccccCCEEEEECCCHHHHHHHHHHHhCCC---eEEEEECCH
Confidence 33445789999999999999999999987 799998654
No 394
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=90.34 E-value=0.22 Score=50.51 Aligned_cols=72 Identities=21% Similarity=0.179 Sum_probs=53.2
Q ss_pred hcCCeEEEEcCChHHHH-HHHHHHhCCCeEe--------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEE
Q 012165 205 EKAKKVVVVGGGYIGME-VAAAAVGWKLDTT--------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTI 275 (469)
Q Consensus 205 ~~~~~vvVvG~G~~g~e-~A~~l~~~g~~v~--------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i 275 (469)
...+++.+||-|-+|+- +|..|.++|.+|+ ...+.|++.||+++.+..... + .-
T Consensus 17 ~~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~gi~~~~G~~~~~-------------~----~~ 79 (524)
T 3hn7_A 17 FQGMHIHILGICGTFMGSLALLARALGHTVTGSDANIYPPMSTQLEQAGVTIEEGYLIAH-------------L----QP 79 (524)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHTTCEEEESCCGGG-------------G----CS
T ss_pred ecCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHCCCEEECCCCHHH-------------c----CC
Confidence 46799999999999997 6888999999998 234678889999876632110 0 02
Q ss_pred eCCEEEEccCCccCCchh
Q 012165 276 DADTIVIGIGAKPTVSPF 293 (469)
Q Consensus 276 ~~D~vi~a~G~~p~~~~~ 293 (469)
.+|+||.++|..++.+.+
T Consensus 80 ~~d~vV~Spgi~~~~p~l 97 (524)
T 3hn7_A 80 APDLVVVGNAMKRGMDVI 97 (524)
T ss_dssp CCSEEEECTTCCTTSHHH
T ss_pred CCCEEEECCCcCCCCHHH
Confidence 489999999998876653
No 395
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=89.73 E-value=0.33 Score=43.92 Aligned_cols=36 Identities=19% Similarity=0.345 Sum_probs=31.9
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (469)
..+|+|||+|-.|..+|..|.+.|.. +|+|+|.+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~--~i~lvD~d~v 66 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVG--NLTLLDFDTV 66 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCS--EEEEECCCBC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCC--eEEEEcCCCc
Confidence 46899999999999999999999863 8999998753
No 396
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=89.58 E-value=0.33 Score=46.52 Aligned_cols=38 Identities=18% Similarity=0.288 Sum_probs=33.0
Q ss_pred CCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
.....+|||+|+|.+|..+|..|...|.+ +|+++|+..
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~~--~I~v~Dr~G 226 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGVK--NVVAVDRKG 226 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTCC--EEEEEETTE
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCCC--eEEEEECCC
Confidence 34568999999999999999999999853 899999873
No 397
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=89.57 E-value=0.26 Score=43.45 Aligned_cols=32 Identities=28% Similarity=0.580 Sum_probs=28.9
Q ss_pred cEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 53 EFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 53 ~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
+|+|+|+|.-|...|..|.+.|+ +|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~---~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKY---GVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTC---CEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCC---eEEEEECCH
Confidence 59999999999999999999987 799998653
No 398
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=89.55 E-value=0.33 Score=46.60 Aligned_cols=38 Identities=24% Similarity=0.417 Sum_probs=32.8
Q ss_pred CCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
.....+|||+|+|.||+.+|.-|...|.+ +|+++|+..
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~--~I~v~D~~G 222 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAAGAT--KVTVVDKFG 222 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHHTCC--EEEEEETTE
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHcCCC--eEEEEECCC
Confidence 34557999999999999999999999863 899999874
No 399
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=88.90 E-value=0.48 Score=43.68 Aligned_cols=35 Identities=14% Similarity=0.148 Sum_probs=30.8
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
..++|.|||+|.-|...|..|++.|+ +|+++|.++
T Consensus 3 ~~~kV~VIGaG~mG~~iA~~la~~G~---~V~l~d~~~ 37 (283)
T 4e12_A 3 GITNVTVLGTGVLGSQIAFQTAFHGF---AVTAYDINT 37 (283)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC---eEEEEeCCH
Confidence 35789999999999999999999998 799988654
No 400
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=88.76 E-value=0.47 Score=45.98 Aligned_cols=35 Identities=17% Similarity=0.155 Sum_probs=30.6
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
...+|+|||+|..|+.+|..++..|. +|+++|..+
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa---~V~v~D~~~ 223 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGA---VVSATDVRP 223 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC---EEEEEcCCH
Confidence 35789999999999999999999986 799988654
No 401
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=88.72 E-value=0.094 Score=51.95 Aligned_cols=70 Identities=20% Similarity=0.225 Sum_probs=48.7
Q ss_pred cCCeEEEEcCChHHHHHHHHHHhCCCeEeee--------HHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeC
Q 012165 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTRY--------EQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDA 277 (469)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~v~~~--------~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~ 277 (469)
.+++++|||.|.+|+..|..|.++|.+|+.. ...++ .|+++..+... . . .+ . .+
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~-~G~~~~~g~~~---~-~--------~~----~-~~ 65 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-EAVERHTGSLN---D-E--------WL----M-AA 65 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTGGGSC-TTSCEEESSCC---H-H--------HH----H-TC
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchhHHhh-CCCEEEECCCc---H-H--------Hh----c-cC
Confidence 4689999999999999999999999998711 12344 56666544311 0 0 00 1 47
Q ss_pred CEEEEccCCccCCchh
Q 012165 278 DTIVIGIGAKPTVSPF 293 (469)
Q Consensus 278 D~vi~a~G~~p~~~~~ 293 (469)
|.||+++|..|+.+.+
T Consensus 66 d~vV~s~gi~~~~p~~ 81 (439)
T 2x5o_A 66 DLIVASPGIALAHPSL 81 (439)
T ss_dssp SEEEECTTSCTTCHHH
T ss_pred CEEEeCCCCCCCCHHH
Confidence 9999999988765543
No 402
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=88.68 E-value=0.81 Score=42.93 Aligned_cols=76 Identities=16% Similarity=0.221 Sum_probs=47.2
Q ss_pred hcCCeEEEEcCChHHHHHHHHHHhCCCeEee-----eHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCC-EEeCC
Q 012165 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTR-----YEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS-TIDAD 278 (469)
Q Consensus 205 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~~-----~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~-~i~~D 278 (469)
....+|.|||+|..|.-+|..|++.|.+|+. ..+.+++.|+.+.... .. ... .+ ... .+-+ .-++|
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~~~~~~~~~i~~~g~~~~~~~-~~-~~~----~~-~~~-~~~~~~~~~D 88 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARAGHEVILIARPQHVQAIEATGLRLETQS-FD-EQV----KV-SAS-SDPSAVQGAD 88 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHTTCEEEEECCHHHHHHHHHHCEEEECSS-CE-EEE----CC-EEE-SCGGGGTTCS
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHCCCeEEEEEcHhHHHHHHhCCeEEEcCC-Cc-EEE----ee-eee-CCHHHcCCCC
Confidence 3567999999999999999999999999882 2344566777765321 11 110 00 111 1211 12689
Q ss_pred EEEEccCCcc
Q 012165 279 TIVIGIGAKP 288 (469)
Q Consensus 279 ~vi~a~G~~p 288 (469)
+||+++....
T Consensus 89 ~vilavk~~~ 98 (318)
T 3hwr_A 89 LVLFCVKSTD 98 (318)
T ss_dssp EEEECCCGGG
T ss_pred EEEEEccccc
Confidence 9999987653
No 403
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=88.51 E-value=0.47 Score=44.78 Aligned_cols=35 Identities=17% Similarity=0.119 Sum_probs=29.9
Q ss_pred CCCcEEEEcCcHHHHH-HHHHHHHcCCCCCcEEEEcCCC
Q 012165 50 ENREFVIVGGGNAAGY-AARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~-aA~~L~~~g~~~~~V~vie~~~ 87 (469)
.+++|.|||.|.+|++ +|..|.++|+ +|++.|...
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~---~V~~~D~~~ 38 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGF---EVSGCDAKM 38 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTC---EEEEEESSC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCC---EEEEEcCCC
Confidence 3578999999999997 7888999998 799988654
No 404
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=88.36 E-value=0.53 Score=44.24 Aligned_cols=37 Identities=19% Similarity=0.232 Sum_probs=30.8
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
++.+|+|||+|..|.+.|..|...+. -.+|.++|-+.
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~-~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQT-ANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTC-SSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCCh
Confidence 34689999999999999999999876 55899998653
No 405
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=88.34 E-value=0.56 Score=43.92 Aligned_cols=81 Identities=17% Similarity=0.110 Sum_probs=50.3
Q ss_pred CeEEEEcCChHHHHHHHHHHhCCCeEeee----HHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCC-EEeCCEEEE
Q 012165 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTRY----EQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS-TIDADTIVI 282 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~v~~~----~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~-~i~~D~vi~ 282 (469)
.+|.|||+|.+|.-+|..|++.|.+|+.+ .+.+++.|+.+.....-..+.+ + .+. .+-+ .-++|+||+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~~~i~~~g~~~~~~~g~~~~~~-----~-~~~-~~~~~~~~~D~vil 75 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRDYEAIAGNGLKVFSINGDFTLPH-----V-KGY-RAPEEIGPMDLVLV 75 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTTHHHHHHTCEEEEETTCCEEESC-----C-CEE-SCHHHHCCCSEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCcHHHHHhCCCEEEcCCCeEEEee-----c-eee-cCHHHcCCCCEEEE
Confidence 47999999999999999999999988821 3667788877653210001100 0 011 1111 126899999
Q ss_pred ccCCccCCchhhh
Q 012165 283 GIGAKPTVSPFER 295 (469)
Q Consensus 283 a~G~~p~~~~~~~ 295 (469)
++......+.++.
T Consensus 76 avk~~~~~~~l~~ 88 (312)
T 3hn2_A 76 GLKTFANSRYEEL 88 (312)
T ss_dssp CCCGGGGGGHHHH
T ss_pred ecCCCCcHHHHHH
Confidence 9876654444443
No 406
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=88.33 E-value=0.53 Score=44.44 Aligned_cols=37 Identities=19% Similarity=0.534 Sum_probs=33.0
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (469)
...+|+|||+|-.|..+|..|.+.|. ++|+++|.+..
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGV--g~ItlvD~D~V 69 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGV--RKITFVDNGTV 69 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTC--CEEEEECCCBC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCC--CEEEEecCCEe
Confidence 45789999999999999999999997 49999998764
No 407
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=88.26 E-value=0.58 Score=43.89 Aligned_cols=37 Identities=11% Similarity=0.270 Sum_probs=31.5
Q ss_pred CCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 012165 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (469)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~ 86 (469)
++...+|.|||+|.-|.+.|..|+..++ .+|+++|..
T Consensus 5 ~~~~~kv~ViGaG~vG~~ia~~l~~~g~--~~v~l~D~~ 41 (315)
T 3tl2_A 5 TIKRKKVSVIGAGFTGATTAFLLAQKEL--ADVVLVDIP 41 (315)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTC--CEEEEECCG
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHhCCC--CeEEEEecc
Confidence 3455789999999999999999999876 489998865
No 408
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=87.91 E-value=0.48 Score=45.51 Aligned_cols=35 Identities=17% Similarity=0.070 Sum_probs=30.5
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
...+|+|||+|..|+.+|..++..|. +|+++|..+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa---~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGA---KTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTC---EEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 45799999999999999999999986 799988653
No 409
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=87.87 E-value=0.83 Score=36.95 Aligned_cols=71 Identities=14% Similarity=0.182 Sum_probs=46.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhCCCeEe------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEE
Q 012165 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTT------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTI 280 (469)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~v~------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~v 280 (469)
.++++|+|.|..|..+|..|.+.|.++. ...+.+++.|+.++.+.. . +.. .+..-..-.+|.+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~------~-~~~----~l~~a~i~~ad~v 75 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNA------A-NEE----IMQLAHLECAKWL 75 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCT------T-SHH----HHHHTTGGGCSEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCC------C-CHH----HHHhcCcccCCEE
Confidence 4689999999999999999999999987 222345567776654310 0 000 0111012368999
Q ss_pred EEccCCcc
Q 012165 281 VIGIGAKP 288 (469)
Q Consensus 281 i~a~G~~p 288 (469)
|++++...
T Consensus 76 i~~~~~~~ 83 (140)
T 3fwz_A 76 ILTIPNGY 83 (140)
T ss_dssp EECCSCHH
T ss_pred EEECCChH
Confidence 99988654
No 410
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=87.83 E-value=0.48 Score=44.54 Aligned_cols=46 Identities=17% Similarity=0.263 Sum_probs=35.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHh--CCCeEe--------------------------eeHHHHHHcCcEEEcCCe
Q 012165 207 AKKVVVVGGGYIGMEVAAAAVG--WKLDTT--------------------------RYEQLYQQNGVKFVKGAS 252 (469)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~--~g~~v~--------------------------~~~~~l~~~gV~~~~~~~ 252 (469)
...|+|||+|+.|+..|.+|++ .|.+|. .+.+.+++.|+++..+..
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv~~~~~~~ 138 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGD 138 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTCCCEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHHcCCEEEECCc
Confidence 4679999999999999999964 588887 235566777887766543
No 411
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=87.63 E-value=0.72 Score=46.09 Aligned_cols=37 Identities=16% Similarity=0.317 Sum_probs=33.7
Q ss_pred CcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC
Q 012165 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY 91 (469)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~ 91 (469)
+||+|||||+|||+||..|++.|+ +|+|+|+.+..+.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~---~v~v~E~~~~~GG 76 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGF---KTLLLEARDRIGG 76 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTC---CEEEECSSSBSBT
T ss_pred CCEEEECCcHHHHHHHHHHHHCCC---CEEEEeCCCCCCC
Confidence 799999999999999999999987 7999999987643
No 412
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=87.57 E-value=0.63 Score=46.12 Aligned_cols=40 Identities=10% Similarity=0.184 Sum_probs=35.8
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY 91 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~ 91 (469)
+..+||+|||||++|++||..|++.|+ +|+|+|+++..+.
T Consensus 9 ~~~~dvvVIGaG~~GL~aA~~La~~G~---~V~vlE~~~~~GG 48 (453)
T 2bcg_G 9 DTDYDVIVLGTGITECILSGLLSVDGK---KVLHIDKQDHYGG 48 (453)
T ss_dssp CCBCSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCG
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCC---eEEEEeCCCCCCc
Confidence 345899999999999999999999998 7999999987653
No 413
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=87.53 E-value=0.54 Score=42.53 Aligned_cols=37 Identities=19% Similarity=0.300 Sum_probs=32.5
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (469)
...+|+|||+|-.|..+|..|.+.|.. +++|+|.+..
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg--~i~lvD~d~v 63 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVG--TLVLADDDDV 63 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCS--EEEEECCCBC
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCC--eEEEEeCCCc
Confidence 346899999999999999999999974 8999998754
No 414
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=87.46 E-value=0.67 Score=43.66 Aligned_cols=37 Identities=14% Similarity=0.367 Sum_probs=31.1
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~ 86 (469)
....+|.|||+|..|.+.|..|+..++ -.+++++|..
T Consensus 3 ~~~~kI~ViGaG~vG~~~a~~l~~~~~-~~~l~l~D~~ 39 (326)
T 3pqe_A 3 KHVNKVALIGAGFVGSSYAFALINQGI-TDELVVIDVN 39 (326)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTC-CSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-CceEEEEecc
Confidence 345689999999999999999999886 4589998864
No 415
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=87.36 E-value=0.51 Score=43.64 Aligned_cols=37 Identities=22% Similarity=0.387 Sum_probs=32.9
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (469)
...+|+|||+|-.|..+|..|++.|. ++++|+|.+..
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGV--G~i~lvD~D~V 71 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGI--GKLLLFDYDKV 71 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTC--SEEEEECCCBC
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCC--CEEEEECCCcc
Confidence 45799999999999999999999996 48999998764
No 416
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=87.33 E-value=0.46 Score=47.19 Aligned_cols=35 Identities=37% Similarity=0.609 Sum_probs=31.4
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
..++|+|||||..|...+..|.+.|. +|+|++++.
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga---~V~vi~~~~ 45 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGA---RLTVNALTF 45 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTB---EEEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcC---EEEEEcCCC
Confidence 45789999999999999999999986 899999864
No 417
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=87.23 E-value=0.92 Score=44.22 Aligned_cols=44 Identities=18% Similarity=0.292 Sum_probs=36.5
Q ss_pred HHHCCcEEEeCCcEEEEeCCCcEEEeCCCeEEEeccEEeccCCC
Q 012165 130 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCT 173 (469)
Q Consensus 130 ~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~yd~lVlAtG~~ 173 (469)
+++.|++++++++|++|+.++..+.+.+|+++.+|+||+|+|..
T Consensus 199 ~~~~G~~i~~~~~V~~i~~~~~~vV~~~g~~~~ad~Vv~a~~~~ 242 (421)
T 3nrn_A 199 IMENKGKILTRKEVVEINIEEKKVYTRDNEEYSFDVAISNVGVR 242 (421)
T ss_dssp HHTTTCEEESSCCEEEEETTTTEEEETTCCEEECSEEEECSCHH
T ss_pred HHHCCCEEEcCCeEEEEEEECCEEEEeCCcEEEeCEEEECCCHH
Confidence 45668999999999999987655555677889999999999964
No 418
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=87.15 E-value=0.62 Score=43.78 Aligned_cols=32 Identities=16% Similarity=0.425 Sum_probs=28.8
Q ss_pred CcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 012165 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (469)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~ 86 (469)
.+|.|||+|.-|.+.|..|.+.|+ +|++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~---~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH---CVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC---EEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC---eEEEEeCC
Confidence 489999999999999999999986 79998764
No 419
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=86.96 E-value=0.72 Score=43.32 Aligned_cols=36 Identities=19% Similarity=0.405 Sum_probs=30.3
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~ 86 (469)
++.+|+|||+|..|.+.|..|...+. -.+|.++|.+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~-~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSI-VDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCS-CSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCC
Confidence 44689999999999999999998875 4579998854
No 420
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=86.96 E-value=1.2 Score=45.98 Aligned_cols=39 Identities=18% Similarity=0.321 Sum_probs=35.5
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~ 90 (469)
.+++||+|||+|..|...|..|++.|. +|++||+.++.+
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~---~vl~id~~~~~g 44 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQ---RVLHVDSRSYYG 44 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSC
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCC---EEEEEcCCCccc
Confidence 346999999999999999999999987 799999999875
No 421
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=86.94 E-value=0.8 Score=43.26 Aligned_cols=36 Identities=11% Similarity=0.225 Sum_probs=30.1
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
++.+|+|||+|.-|.+.|..|++.|+- +|+++|.++
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~g~~--~V~L~D~~~ 43 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALRELA--DVVLYDVVK 43 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCC--EEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC--eEEEEECCh
Confidence 345899999999999999999998862 599988653
No 422
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=86.66 E-value=0.77 Score=42.04 Aligned_cols=34 Identities=21% Similarity=0.284 Sum_probs=30.0
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
+++|+|.|+|+-|...+..|.+.|+ +|+++++..
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~---~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGH---EVTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC---CEEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC---EEEEEeCCc
Confidence 4589999999999999999999987 798887654
No 423
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=86.51 E-value=0.82 Score=43.02 Aligned_cols=37 Identities=11% Similarity=0.182 Sum_probs=31.0
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
|++.+|.|||+|..|.+.|..|...++ . +|+++|..+
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~-~-~v~L~Di~~ 41 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKEL-G-DVVLFDIAE 41 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTC-C-EEEEECSSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCC-C-eEEEEeCCc
Confidence 445689999999999999999999887 3 899988654
No 424
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=86.46 E-value=1.2 Score=41.55 Aligned_cols=66 Identities=23% Similarity=0.340 Sum_probs=0.0
Q ss_pred eEEEEcCChHHHHHHHHHHhCCCeEe------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeCCEEEE
Q 012165 209 KVVVVGGGYIGMEVAAAAVGWKLDTT------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVI 282 (469)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g~~v~------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~ 282 (469)
+|+|||+|.+|.-+|..|. .|.+|+ .-.+.+++.|+.+...... ... .+.......-++|+||+
T Consensus 4 kI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~-~~~--------~~~~~~~~~~~~D~vil 73 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRLYKGGEE-FRA--------DCSADTSINSDFDLLVV 73 (307)
T ss_dssp EEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEEEETTEE-EEE--------CCEEESSCCSCCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCceEecCCCe-ecc--------cccccccccCCCCEEEE
Q ss_pred cc
Q 012165 283 GI 284 (469)
Q Consensus 283 a~ 284 (469)
++
T Consensus 74 av 75 (307)
T 3ego_A 74 TV 75 (307)
T ss_dssp CC
T ss_pred Ee
No 425
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=86.46 E-value=1.1 Score=43.42 Aligned_cols=38 Identities=18% Similarity=0.332 Sum_probs=32.9
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~ 89 (469)
...++|+|||+|..|..++..+++.|+ ++.+++..+..
T Consensus 12 ~~~k~IlIlG~G~~g~~la~aa~~~G~---~vi~~d~~~~~ 49 (389)
T 3q2o_A 12 LPGKTIGIIGGGQLGRMMALAAKEMGY---KIAVLDPTKNS 49 (389)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC---EEEEEeCCCCC
Confidence 456799999999999999999999998 79999876543
No 426
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=86.31 E-value=0.81 Score=46.16 Aligned_cols=26 Identities=31% Similarity=0.339 Sum_probs=21.5
Q ss_pred CeEEEEcCChHHHHHHHHHHh-CCCeE
Q 012165 208 KKVVVVGGGYIGMEVAAAAVG-WKLDT 233 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~-~g~~v 233 (469)
-.++|||+|..|+-+|..|++ -+.+|
T Consensus 18 yD~IIVGsG~aG~v~A~rLse~~~~~V 44 (526)
T 3t37_A 18 CDIVIVGGGSAGSLLAARLSEDPDSRV 44 (526)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTSCE
T ss_pred eeEEEECccHHHHHHHHHHHhCCCCeE
Confidence 479999999999999999987 34454
No 427
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=86.21 E-value=0.6 Score=46.34 Aligned_cols=70 Identities=11% Similarity=0.164 Sum_probs=47.3
Q ss_pred cCCeEEEEcCChHHHHHHHHHHhCCCeEe--------eeHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCCCEEeC
Q 012165 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTT--------RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDA 277 (469)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~v~--------~~~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~ 277 (469)
.+++++|||+|.+|...+..|.+.|.+++ .+.++.++.+++++.+. +..+.--.+
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~-----------------~~~~~l~~~ 73 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGP-----------------FDETLLDSC 73 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESS-----------------CCGGGGTTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECC-----------------CCccccCCc
Confidence 57899999999999999999999999987 22222233456555321 011111258
Q ss_pred CEEEEccCCc-cCCch
Q 012165 278 DTIVIGIGAK-PTVSP 292 (469)
Q Consensus 278 D~vi~a~G~~-p~~~~ 292 (469)
|+||.++|.. .|...
T Consensus 74 ~lVi~at~~~~~n~~i 89 (457)
T 1pjq_A 74 WLAIAATDDDTVNQRV 89 (457)
T ss_dssp SEEEECCSCHHHHHHH
T ss_pred cEEEEcCCCHHHHHHH
Confidence 9999999987 35443
No 428
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=86.17 E-value=0.73 Score=44.85 Aligned_cols=34 Identities=15% Similarity=0.140 Sum_probs=29.9
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
..+|+|||+|.+|+.++..++..|. +|+++|..+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga---~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGA---IVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC---EEEEEcCCH
Confidence 5789999999999999999999886 799988654
No 429
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=86.06 E-value=1.1 Score=36.00 Aligned_cols=43 Identities=14% Similarity=0.169 Sum_probs=32.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHhCCCeEe------eeHHHHHHcCcEEEc
Q 012165 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTT------RYEQLYQQNGVKFVK 249 (469)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~v~------~~~~~l~~~gV~~~~ 249 (469)
.++++|+|+|.+|..+|..|.+.|.++. ...+.+++.|+.++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~ 54 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVI 54 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEE
Confidence 4689999999999999999999999887 122334556665543
No 430
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=86.04 E-value=0.65 Score=43.44 Aligned_cols=32 Identities=19% Similarity=0.298 Sum_probs=28.0
Q ss_pred CcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 012165 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (469)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~ 86 (469)
.+|.|||+|.-|.+.|..|.+.|+ +|++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~---~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE---DVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC---CEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC---eEEEEEcC
Confidence 479999999999999999999987 79998754
No 431
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=86.02 E-value=0.92 Score=42.53 Aligned_cols=36 Identities=11% Similarity=0.362 Sum_probs=30.6
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~ 86 (469)
++.+|+|||+|..|.+.|..|+..+. ..+|.++|.+
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~-~~ev~l~Di~ 40 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGI-ADEIVLIDAN 40 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTC-CSEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCC-CCEEEEEeCC
Confidence 34689999999999999999998875 4579998864
No 432
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=85.94 E-value=0.47 Score=46.74 Aligned_cols=39 Identities=13% Similarity=0.264 Sum_probs=34.8
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY 91 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~ 91 (469)
..+||+|||+|++|+++|..|++.|+ +|+++|+++..+.
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~---~v~~~e~~~~~gg 43 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGK---KVLHMDRNPYYGG 43 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCT
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCC---cEEEEecCCCccc
Confidence 45899999999999999999999987 7999999887653
No 433
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=85.78 E-value=0.85 Score=43.60 Aligned_cols=38 Identities=18% Similarity=0.246 Sum_probs=31.1
Q ss_pred CCCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 47 FANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 47 ~~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
|.+++.+|.|||+|.-|.+.|..|++.|+ +|++++.++
T Consensus 25 m~~~~mkI~VIGaG~mG~alA~~La~~G~---~V~l~~r~~ 62 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWGTALALVLARKGQ---KVRLWSYES 62 (356)
T ss_dssp --CCCSCEEEECCSHHHHHHHHHHHTTTC---CEEEECSCH
T ss_pred ccccCCeEEEECccHHHHHHHHHHHHCCC---eEEEEeCCH
Confidence 33445689999999999999999999987 799988653
No 434
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=85.64 E-value=0.94 Score=42.95 Aligned_cols=36 Identities=22% Similarity=0.334 Sum_probs=30.4
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 012165 50 ENREFVIVGG-GNAAGYAARTFVEHGMADGRLCIVSKE 86 (469)
Q Consensus 50 ~~~~vvIIGg-G~AGl~aA~~L~~~g~~~~~V~vie~~ 86 (469)
.+.+|+|||+ |.-|.++|..+...|. ..+|+++|..
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~-~~evvLiDi~ 43 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRL-TPNLCLYDPF 43 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTC-CSCEEEECSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCC-CCEEEEEeCC
Confidence 3468999997 9999999999999886 4489998854
No 435
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=85.57 E-value=0.91 Score=42.90 Aligned_cols=31 Identities=23% Similarity=0.514 Sum_probs=28.1
Q ss_pred CcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcC
Q 012165 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSK 85 (469)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~ 85 (469)
.+|.|||+|.-|.+.|..|.+.|+ +|+++++
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~---~V~~~~r 34 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGE---AINVLAR 34 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTC---CEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC---EEEEEEC
Confidence 489999999999999999999987 7998875
No 436
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=85.53 E-value=1.2 Score=42.80 Aligned_cols=38 Identities=16% Similarity=0.302 Sum_probs=33.1
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~ 89 (469)
..+++|.|||+|.-|...+..+++.|+ ++.+++..+..
T Consensus 10 ~~~~~IlIlG~G~lg~~la~aa~~lG~---~viv~d~~~~~ 47 (377)
T 3orq_A 10 KFGATIGIIGGGQLGKMMAQSAQKMGY---KVVVLDPSEDC 47 (377)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC---EEEEEECCCCC
Confidence 456789999999999999999999998 79999876654
No 437
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=85.52 E-value=0.73 Score=43.30 Aligned_cols=35 Identities=26% Similarity=0.350 Sum_probs=30.1
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
..++|.|||+|.-|...|..|++.|+ +|+++|.++
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~G~---~V~l~d~~~ 39 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASGGF---RVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTC---CEEEECSCH
T ss_pred CCceEEEEeeCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 45789999999999999999999998 799988664
No 438
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=85.47 E-value=0.9 Score=43.90 Aligned_cols=35 Identities=20% Similarity=0.113 Sum_probs=30.3
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
...+|+|+|+|.+|+.++..++..|. +|+++|..+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga---~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGA---VVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 46799999999999999999999986 688888653
No 439
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=85.17 E-value=1.1 Score=42.29 Aligned_cols=72 Identities=17% Similarity=0.243 Sum_probs=46.2
Q ss_pred CeEEEEcCChHHHHHHHHHHhCCCeEeee-----HHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEcCCC-CEEeCCEEE
Q 012165 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTRY-----EQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG-STIDADTIV 281 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~v~~~-----~~~l~~~gV~~~~~~~v~~i~~~~~~~v~~v~~~~g-~~i~~D~vi 281 (469)
.+|.|||+|.+|.-+|..|++.|.+|+.+ .+.+++.|+.+.... .. ... . + .+. .+- ..-++|+||
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~g~~~~~~~-~~-~~~--~--~-~~~-~~~~~~~~~D~Vi 75 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARGATLQALQTAGLRLTEDG-AT-HTL--P--V-RAT-HDAAALGEQDVVI 75 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCHHHHHHHHHTCEEEEETT-EE-EEE--C--C-EEE-SCHHHHCCCSEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEEChHHHHHHHHCCCEEecCC-Ce-EEE--e--e-eEE-CCHHHcCCCCEEE
Confidence 57999999999999999999999988822 234566787765321 11 110 0 0 111 111 113589999
Q ss_pred EccCCc
Q 012165 282 IGIGAK 287 (469)
Q Consensus 282 ~a~G~~ 287 (469)
+++...
T Consensus 76 lavk~~ 81 (335)
T 3ghy_A 76 VAVKAP 81 (335)
T ss_dssp ECCCHH
T ss_pred EeCCch
Confidence 998654
No 440
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=85.09 E-value=0.94 Score=43.70 Aligned_cols=40 Identities=15% Similarity=0.219 Sum_probs=33.7
Q ss_pred cCCCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 012165 46 SFANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (469)
Q Consensus 46 ~~~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (469)
||.+++++|+|+|+|..|...+..+++.|+ ++.+++..+.
T Consensus 6 pm~~~~~~ili~g~g~~~~~~~~a~~~~G~---~v~~~~~~~~ 45 (391)
T 1kjq_A 6 ALRPAATRVMLLGSGELGKEVAIECQRLGV---EVIAVDRYAD 45 (391)
T ss_dssp TTSTTCCEEEEESCSHHHHHHHHHHHTTTC---EEEEEESSTT
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHcCC---EEEEEECCCC
Confidence 455566799999999999999999999987 7888887654
No 441
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=85.00 E-value=0.81 Score=42.90 Aligned_cols=34 Identities=26% Similarity=0.360 Sum_probs=30.3
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
..+|.|||+|.-|...|..++..|+ +|+++|..+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~---~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGF---RVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC---CEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCC---eEEEEECCH
Confidence 4689999999999999999999998 799999765
No 442
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=84.96 E-value=0.89 Score=42.24 Aligned_cols=32 Identities=13% Similarity=0.232 Sum_probs=28.4
Q ss_pred CcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 012165 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (469)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~ 86 (469)
.+|.|||+|.-|...|..|.+.|+ +|++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~---~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN---DVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---EEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC---cEEEEECC
Confidence 379999999999999999999987 79988754
No 443
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=84.95 E-value=0.83 Score=43.58 Aligned_cols=37 Identities=19% Similarity=0.466 Sum_probs=32.6
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (469)
...+|+|||+|-.|..+|..|++.|. ++++|+|.+..
T Consensus 117 ~~~~VlvvG~GglGs~va~~La~aGv--g~i~lvD~D~V 153 (353)
T 3h5n_A 117 KNAKVVILGCGGIGNHVSVILATSGI--GEIILIDNDQI 153 (353)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTC--SEEEEEECCBC
T ss_pred hCCeEEEECCCHHHHHHHHHHHhCCC--CeEEEECCCcC
Confidence 35789999999999999999999996 48999998754
No 444
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=84.91 E-value=0.92 Score=43.14 Aligned_cols=32 Identities=16% Similarity=0.248 Sum_probs=28.5
Q ss_pred CcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 012165 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (469)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~ 86 (469)
.+|.|||+|.-|...|..|.+.|+ +|+++++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~---~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQ---SVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---EEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC---EEEEEeCC
Confidence 589999999999999999999987 79888754
No 445
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=84.90 E-value=0.72 Score=42.91 Aligned_cols=41 Identities=20% Similarity=0.198 Sum_probs=31.9
Q ss_pred CeEEEEcCChHHHHHHHHHHhCCCeEee------eHHHHHHcCcEEE
Q 012165 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTR------YEQLYQQNGVKFV 248 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~v~~------~~~~l~~~gV~~~ 248 (469)
.+|.|||+|.+|.-+|..|.+.|.+|+. ..+.+++.|+.+.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~ 50 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIAD 50 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEE
Confidence 4799999999999999999999998871 1234455576654
No 446
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=84.74 E-value=0.83 Score=44.57 Aligned_cols=40 Identities=15% Similarity=0.307 Sum_probs=34.0
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (469)
....+|||.|+|.||+.+|..|.+.|.+..+|.++|+...
T Consensus 217 l~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~Gl 256 (487)
T 3nv9_A 217 IHECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGS 256 (487)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTEE
T ss_pred hhhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEecccc
Confidence 3457899999999999999999999985568999997653
No 447
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=84.74 E-value=0.75 Score=40.57 Aligned_cols=34 Identities=21% Similarity=0.326 Sum_probs=28.4
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEE-EcCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCI-VSKE 86 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~v-ie~~ 86 (469)
++.+|.|||+|.-|.+.|..|.+.|+ +|++ .+++
T Consensus 22 ~mmkI~IIG~G~mG~~la~~l~~~g~---~V~~v~~r~ 56 (220)
T 4huj_A 22 SMTTYAIIGAGAIGSALAERFTAAQI---PAIIANSRG 56 (220)
T ss_dssp GSCCEEEEECHHHHHHHHHHHHHTTC---CEEEECTTC
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCC---EEEEEECCC
Confidence 34589999999999999999999987 6877 5543
No 448
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=84.63 E-value=0.8 Score=44.73 Aligned_cols=33 Identities=15% Similarity=0.423 Sum_probs=30.1
Q ss_pred CcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
.+|+|||.|.-|...|..|.+.|+ +|++||.++
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~---~vvvId~d~ 37 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGV---KMVVLDHDP 37 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTC---CEEEEECCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCC---CEEEEECCH
Confidence 479999999999999999999987 799999764
No 449
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=84.63 E-value=1.1 Score=42.03 Aligned_cols=34 Identities=12% Similarity=0.303 Sum_probs=29.4
Q ss_pred CcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 012165 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (469)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~ 86 (469)
.+|+|||+|.-|...|..|.+.|+ ..+|++++.+
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~-~~~V~l~d~~ 41 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGI-AREIVLEDIA 41 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCC
Confidence 489999999999999999999875 3479998865
No 450
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=84.59 E-value=0.74 Score=42.12 Aligned_cols=33 Identities=21% Similarity=0.346 Sum_probs=28.8
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~ 86 (469)
+.+|+|.|+|+-|...+..|.+.|+ +|+.+.+.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~---~V~~~~r~ 37 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGW---RIIGTSRN 37 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTC---EEEEEESC
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCC---EEEEEEcC
Confidence 3689999999999999999999987 78887654
No 451
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=84.53 E-value=0.75 Score=42.32 Aligned_cols=29 Identities=28% Similarity=0.342 Sum_probs=25.7
Q ss_pred CeEEEEcCChHHHHHHHHHHhC-CCeEeee
Q 012165 208 KKVVVVGGGYIGMEVAAAAVGW-KLDTTRY 236 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~-g~~v~~~ 236 (469)
.+|+|||+|++|+.+|..|++. |.+|+.+
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~vi 69 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAII 69 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEE
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEE
Confidence 4799999999999999999997 8888733
No 452
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=84.40 E-value=1.2 Score=40.72 Aligned_cols=33 Identities=18% Similarity=0.442 Sum_probs=29.5
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~ 86 (469)
.++++|||+|-+|-+++..|.+.|. +|+|+++.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~---~v~V~nRt 150 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGL---QVSVLNRS 150 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC---EEEEEeCC
Confidence 6799999999999999999999984 89998755
No 453
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=84.24 E-value=0.69 Score=45.46 Aligned_cols=28 Identities=25% Similarity=0.429 Sum_probs=25.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHhCCCeEe
Q 012165 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTT 234 (469)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~v~ 234 (469)
.++|+|||+|+.|+.+|..|++.|.+|+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~ 49 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVT 49 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEE
Confidence 3689999999999999999999999987
No 454
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=84.23 E-value=1.3 Score=38.75 Aligned_cols=35 Identities=20% Similarity=0.261 Sum_probs=30.0
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (469)
..+|.|||+|.-|.+.|..|.+.|+ +|+++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~---~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGH---EVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC---EEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC---EEEEEcCCHH
Confidence 3579999999999999999999987 7999987643
No 455
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=83.98 E-value=1.3 Score=41.52 Aligned_cols=37 Identities=16% Similarity=0.303 Sum_probs=31.2
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
|.+.+|.|||+|..|.+.|..|+..+. . +|+++|..+
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~-~-~v~l~Di~~ 39 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQL-G-DVVLFDIAQ 39 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTC-C-EEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-c-eEEEEeCCh
Confidence 334689999999999999999999886 3 899988654
No 456
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=83.96 E-value=1.2 Score=43.59 Aligned_cols=38 Identities=16% Similarity=0.213 Sum_probs=32.6
Q ss_pred CCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 012165 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (469)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (469)
.+..++|+|+|+|.-|...+..+++.|+ ++.+++..+.
T Consensus 32 ~~~~~~IlIlG~G~lg~~~~~aa~~lG~---~v~v~d~~~~ 69 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQLGRMFCFAAQSMGY---RVAVLDPDPA 69 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCC---EEEEECCCCc
Confidence 3456799999999999999999999998 7889986654
No 457
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=83.91 E-value=0.99 Score=45.88 Aligned_cols=37 Identities=19% Similarity=0.534 Sum_probs=32.7
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (469)
...+|+|||+|-.|..+|..|++.|. ++|+|+|.+..
T Consensus 326 ~~~kVLIVGaGGLGs~va~~La~aGV--G~ItLvD~D~V 362 (598)
T 3vh1_A 326 KNTKVLLLGAGTLGCYVSRALIAWGV--RKITFVDNGTV 362 (598)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHTTTC--CEEEEECCSBC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCC--CEEEEECCCcc
Confidence 35789999999999999999999997 48999998754
No 458
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=83.91 E-value=1.4 Score=43.88 Aligned_cols=46 Identities=9% Similarity=0.232 Sum_probs=37.6
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCCcE---EEeCCCeEEEeccEEeccCCC
Q 012165 128 EWYKEKGIEMIYQDPVTSIDIEKQT---LITNSGKLLKYGSLIVATGCT 173 (469)
Q Consensus 128 ~~~~~~~i~~~~~~~v~~id~~~~~---v~~~~g~~~~yd~lVlAtG~~ 173 (469)
+.+++.|.+++++++|++|..++.. |++.+|+++.+|+||.+++..
T Consensus 229 ~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 229 KLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC--
T ss_pred HHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHH
Confidence 3456789999999999999877653 678999999999999988754
No 459
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=83.75 E-value=1.1 Score=42.62 Aligned_cols=37 Identities=16% Similarity=0.284 Sum_probs=32.8
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (469)
...+|+|||.|-.|..+|..|.+.|.. +++|+|.+..
T Consensus 35 ~~~~VlivG~GGlG~~ia~~La~~Gvg--~itlvD~d~V 71 (346)
T 1y8q_A 35 RASRVLLVGLKGLGAEIAKNLILAGVK--GLTMLDHEQV 71 (346)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTCS--EEEEECCCBC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCC--EEEEEECCCc
Confidence 357999999999999999999999974 8999998764
No 460
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=83.60 E-value=1 Score=39.47 Aligned_cols=34 Identities=15% Similarity=0.346 Sum_probs=29.8
Q ss_pred CCcEEEEcC-cHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 51 NREFVIVGG-GNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 51 ~~~vvIIGg-G~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
+++|+|.|| |.-|...+..|.+.|+ +|+++++.+
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~---~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGF---EVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTC---EEEEECSCG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC---EEEEEEcCc
Confidence 468999996 9999999999999987 799988764
No 461
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=83.48 E-value=1.1 Score=42.77 Aligned_cols=34 Identities=29% Similarity=0.380 Sum_probs=29.8
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
..+|+|+|+|.+|..++..|+..|. +|++++..+
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga---~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGA---QVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC---EEEEEeCCH
Confidence 3789999999999999999999986 799987653
No 462
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=83.47 E-value=1.2 Score=45.37 Aligned_cols=37 Identities=19% Similarity=0.534 Sum_probs=33.1
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (469)
...+|+|||+|-.|..+|..|++.|. ++|+|+|.+..
T Consensus 325 ~~arVLIVGaGGLGs~vA~~La~aGV--G~ItLvD~D~V 361 (615)
T 4gsl_A 325 KNTKVLLLGAGTLGCYVSRALIAWGV--RKITFVDNGTV 361 (615)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTC--CEEEEECCCBC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCC--CEEEEEcCCCC
Confidence 45789999999999999999999997 49999998764
No 463
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=83.24 E-value=1.4 Score=43.34 Aligned_cols=39 Identities=15% Similarity=0.113 Sum_probs=33.6
Q ss_pred cCCCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 46 SFANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 46 ~~~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
|..+.+.+|.|||.|.-||..|..|++.|+ +|+-+|-++
T Consensus 16 p~~~~m~~IaViGlGYVGLp~A~~~A~~G~---~V~g~Did~ 54 (444)
T 3vtf_A 16 PRGSHMASLSVLGLGYVGVVHAVGFALLGH---RVVGYDVNP 54 (444)
T ss_dssp CTTCCCCEEEEECCSHHHHHHHHHHHHHTC---EEEEECSCH
T ss_pred CCCCCCCEEEEEccCHHHHHHHHHHHhCCC---cEEEEECCH
Confidence 444567899999999999999999999998 799998654
No 464
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=83.22 E-value=1.3 Score=43.01 Aligned_cols=37 Identities=11% Similarity=0.258 Sum_probs=31.9
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~ 89 (469)
+++++|+|+|||..|...+..+++.|+ ++.+++ .+..
T Consensus 22 m~~~~I~ilGgG~lg~~l~~aa~~lG~---~v~~~d-~~~~ 58 (403)
T 3k5i_A 22 WNSRKVGVLGGGQLGRMLVESANRLNI---QVNVLD-ADNS 58 (403)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTC---EEEEEE-STTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC---EEEEEE-CCCC
Confidence 456899999999999999999999998 788888 5443
No 465
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=83.00 E-value=1.1 Score=44.67 Aligned_cols=29 Identities=34% Similarity=0.497 Sum_probs=26.6
Q ss_pred cCCeEEEEcCChHHHHHHHHHHhCCCeEe
Q 012165 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTT 234 (469)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~v~ 234 (469)
..++|+|||+|.+|+.+|..|.+.|.+|+
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~ 60 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVT 60 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEE
Confidence 35789999999999999999999999887
No 466
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=82.98 E-value=0.96 Score=41.86 Aligned_cols=32 Identities=13% Similarity=0.182 Sum_probs=28.7
Q ss_pred CcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 012165 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (469)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~ 86 (469)
.+|.|||+|.-|.+.|..|.+.|+ +|+++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~---~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLP---HTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCT---TCEEEESS
T ss_pred cEEEEECCCHHHHHHHHHHHHCCC---eEEEEEec
Confidence 479999999999999999999986 79998865
No 467
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=82.96 E-value=1.3 Score=42.49 Aligned_cols=35 Identities=14% Similarity=0.307 Sum_probs=30.6
Q ss_pred CcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 012165 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (469)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~ 89 (469)
++|+|||+|..|...+..+++.|+ ++.+++..+..
T Consensus 2 ~~Ililg~g~~g~~~~~a~~~~G~---~v~~~~~~~~~ 36 (380)
T 3ax6_A 2 KKIGIIGGGQLGKMMTLEAKKMGF---YVIVLDPTPRS 36 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC---EEEEEeCCCCC
Confidence 689999999999999999999988 78888876543
No 468
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=82.80 E-value=1.4 Score=41.13 Aligned_cols=35 Identities=11% Similarity=0.237 Sum_probs=30.2
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~ 86 (469)
..+.+|.|||.|.-|...|..|++.|+ +|+++++.
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~---~V~~~dr~ 53 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGF---KVTVWNRT 53 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSS
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCC---eEEEEeCC
Confidence 345689999999999999999999987 78887754
No 469
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=82.78 E-value=1.3 Score=43.15 Aligned_cols=35 Identities=23% Similarity=0.370 Sum_probs=31.8
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (469)
++||+|||||++|++||..|++.|. +|+|+|+++.
T Consensus 1 ~~dVvVIGaG~aGl~aA~~L~~~G~---~V~vlE~~~~ 35 (431)
T 3k7m_X 1 MYDAIVVGGGFSGLKAARDLTNAGK---KVLLLEGGER 35 (431)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTC---CEEEECSSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHcCC---eEEEEecCCC
Confidence 3699999999999999999999987 7999998654
No 470
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=82.77 E-value=1.3 Score=43.98 Aligned_cols=40 Identities=18% Similarity=0.212 Sum_probs=34.7
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY 91 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~~~~ 91 (469)
++||+|||||++||+||.+|++.|+ ..+|+|+|+++..+.
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~-~~~V~vlEa~~~~GG 41 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPC-PPKVVLVESSERLGG 41 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSS-CCEEEEECSSSSSBT
T ss_pred CceEEEECCcHHHHHHHHHHHhCCC-CCcEEEEeCCCCCCC
Confidence 4799999999999999999999986 457999999876543
No 471
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=82.69 E-value=1.4 Score=41.01 Aligned_cols=36 Identities=19% Similarity=0.381 Sum_probs=30.1
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
+.+|.|||+|..|...|..|...++ -.+|+|+|.+.
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~-~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGI-ADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTC-CSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCC-CCEEEEEcCCc
Confidence 3689999999999999999998886 55799988653
No 472
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=82.66 E-value=1.4 Score=40.17 Aligned_cols=34 Identities=12% Similarity=0.254 Sum_probs=29.6
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~ 86 (469)
..++++|+|+|-.|.++|..|.+.|. +|+++++.
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~---~V~v~~R~ 151 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDC---AVTITNRT 151 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCC---EEEEEECC
Confidence 45789999999999999999999985 79988754
No 473
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=82.54 E-value=1.3 Score=41.46 Aligned_cols=35 Identities=23% Similarity=0.407 Sum_probs=29.9
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~ 86 (469)
+.+|+|||+|..|.+.+..|...+. -.+|.++|..
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~-~~el~L~Di~ 39 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGI-AEEFVIVDVV 39 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTC-CSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCC-CCEEEEEeCC
Confidence 3689999999999999999998876 4578898853
No 474
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=82.50 E-value=1 Score=43.53 Aligned_cols=27 Identities=30% Similarity=0.394 Sum_probs=25.1
Q ss_pred CeEEEEcCChHHHHHHHHHHhCCCeEe
Q 012165 208 KKVVVVGGGYIGMEVAAAAVGWKLDTT 234 (469)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~v~ 234 (469)
++|+|||+|..|++.|..+++.|.+|.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~ 28 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVR 28 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEE
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEE
Confidence 469999999999999999999999886
No 475
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=82.42 E-value=1.6 Score=41.10 Aligned_cols=37 Identities=22% Similarity=0.381 Sum_probs=31.2
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~ 86 (469)
....+|.|||+|..|.++|..|+..+. -.++.++|..
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~-~~el~l~D~~ 43 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGI-AQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTC-CSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-CCeEEEEeCC
Confidence 345689999999999999999999886 4589998864
No 476
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=82.35 E-value=1.7 Score=45.63 Aligned_cols=47 Identities=17% Similarity=0.253 Sum_probs=36.7
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCc--EEEeCCCe-EEEeccEEeccCCCCC
Q 012165 129 WYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGK-LLKYGSLIVATGCTAS 175 (469)
Q Consensus 129 ~~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~-~~~yd~lVlAtG~~~~ 175 (469)
.+++.|++++.+++|+++..++. .|.+.+|. ++.+|+||+|||....
T Consensus 421 ~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 421 LAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLP 470 (689)
T ss_dssp HHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTT
T ss_pred HHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchh
Confidence 34567999999999999976543 56777776 7999999999997643
No 477
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=82.32 E-value=1.7 Score=39.81 Aligned_cols=33 Identities=15% Similarity=0.320 Sum_probs=28.6
Q ss_pred CCcEEEEcC-cHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 012165 51 NREFVIVGG-GNAAGYAARTFVEHGMADGRLCIVSKE 86 (469)
Q Consensus 51 ~~~vvIIGg-G~AGl~aA~~L~~~g~~~~~V~vie~~ 86 (469)
+.+|.|||+ |.-|...|..|.+.|+ +|+++++.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~---~V~~~~r~ 44 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAH---HLAAIEIA 44 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSS---EEEEECCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC---EEEEEECC
Confidence 458999999 9999999999999987 78887643
No 478
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=82.30 E-value=0.51 Score=38.42 Aligned_cols=33 Identities=18% Similarity=0.327 Sum_probs=28.3
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~ 86 (469)
.++|+|||+|..|...+..|.+.|. +|+++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~---~v~v~~r~ 53 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQY---KVTVAGRN 53 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTC---EEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC---EEEEEcCC
Confidence 5689999999999999999988775 58888754
No 479
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=82.25 E-value=1.6 Score=40.21 Aligned_cols=36 Identities=25% Similarity=0.417 Sum_probs=30.4
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~ 86 (469)
...++++|+|+|-+|-+++..|.+.|.. +|+++++.
T Consensus 125 l~~k~vlVlGaGG~g~aia~~L~~~G~~--~v~i~~R~ 160 (283)
T 3jyo_A 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQ--KLQVADLD 160 (283)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCS--EEEEECSS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCC--EEEEEECC
Confidence 4567999999999999999999999863 68888654
No 480
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=82.23 E-value=1.5 Score=40.85 Aligned_cols=34 Identities=26% Similarity=0.363 Sum_probs=29.7
Q ss_pred cEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 53 EFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 53 ~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
+|+|||+|..|.+.|..|+..|+ ..+|+++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~-~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGS-CSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-CSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCCH
Confidence 69999999999999999999886 45799998653
No 481
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=82.23 E-value=1.7 Score=40.57 Aligned_cols=33 Identities=9% Similarity=0.227 Sum_probs=28.6
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~ 86 (469)
+.+|.|||+|.-|...|..|.+.|+ +|+++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~---~V~~~~~~ 62 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGH---TVTVWNRT 62 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTC---CEEEECSS
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCC---EEEEEeCC
Confidence 4679999999999999999999887 68887654
No 482
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=82.06 E-value=2.4 Score=33.67 Aligned_cols=28 Identities=18% Similarity=0.266 Sum_probs=25.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHhCCCeEe
Q 012165 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTT 234 (469)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~v~ 234 (469)
+.+++|+|+|.+|..++..|.+.|.++.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~ 31 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIV 31 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEE
Confidence 3589999999999999999999998887
No 483
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=82.04 E-value=1.7 Score=37.92 Aligned_cols=34 Identities=18% Similarity=0.309 Sum_probs=28.5
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHH-HcCCCCCcEEEEcCC
Q 012165 50 ENREFVIVGG-GNAAGYAARTFV-EHGMADGRLCIVSKE 86 (469)
Q Consensus 50 ~~~~vvIIGg-G~AGl~aA~~L~-~~g~~~~~V~vie~~ 86 (469)
+++.|+|.|| |.-|...+..|. +.|+ +|+++++.
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g~---~V~~~~r~ 39 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTDM---HITLYGRQ 39 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCCC---EEEEEESS
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCCc---eEEEEecC
Confidence 3467999995 899999999999 7887 78888765
No 484
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=82.03 E-value=1.6 Score=40.77 Aligned_cols=35 Identities=17% Similarity=0.370 Sum_probs=29.6
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
+.+|.|||+|.-|.+.|..|++.|+. +|+++|.++
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~--~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLA--DVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCC--EEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCc--eEEEEeCCc
Confidence 35899999999999999999998862 599988653
No 485
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=82.01 E-value=0.48 Score=47.12 Aligned_cols=32 Identities=28% Similarity=0.547 Sum_probs=29.6
Q ss_pred cEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 53 EFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 53 ~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
+|+|+|+|--|.+.|..|.+.|+ +|++||+++
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~~~---~v~vId~d~ 36 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGENN---DITIVDKDG 36 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCSTTE---EEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCC---CEEEEECCH
Confidence 69999999999999999998887 799999875
No 486
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=81.94 E-value=1.6 Score=41.11 Aligned_cols=37 Identities=22% Similarity=0.381 Sum_probs=30.7
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~ 86 (469)
+++.+|+|||+|..|.+.+..|...+. -.+|.++|..
T Consensus 7 ~~~~KI~IiGaG~vG~~la~~l~~~~~-~~el~L~Di~ 43 (326)
T 2zqz_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGI-AQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTC-CSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCC-CCEEEEEeCC
Confidence 344689999999999999999998875 4578888853
No 487
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=81.93 E-value=1.6 Score=40.36 Aligned_cols=36 Identities=25% Similarity=0.427 Sum_probs=30.9
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 012165 50 ENREFVIVGG-GNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (469)
Q Consensus 50 ~~~~vvIIGg-G~AGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (469)
++++|+|.|| |+-|...+..|.+.|+ +|+++++.+.
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGE---EVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC---CEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCC---EEEEEecCCc
Confidence 4578999999 9999999999999987 7999887654
No 488
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=81.84 E-value=1.4 Score=43.14 Aligned_cols=37 Identities=8% Similarity=0.335 Sum_probs=32.6
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (469)
...+|+|||+|-.|..+|..|++.|. ++|+|+|.+..
T Consensus 39 ~~~~VlvvG~GGlGs~va~~La~aGv--g~i~ivD~D~V 75 (434)
T 1tt5_B 39 DTCKVLVIGAGGLGCELLKNLALSGF--RQIHVIDMDTI 75 (434)
T ss_dssp HTCCEEEECSSTHHHHHHHHHHHTTC--CCEEEEECCBC
T ss_pred cCCEEEEECcCHHHHHHHHHHHHcCC--CEEEEEcCCEe
Confidence 35789999999999999999999997 48999997753
No 489
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=81.83 E-value=1.6 Score=37.32 Aligned_cols=33 Identities=15% Similarity=0.381 Sum_probs=29.1
Q ss_pred CcEEEEcC-cHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 52 REFVIVGG-GNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 52 ~~vvIIGg-G~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
++|+|+|| |.-|...+..|.+.|+ +|+++++.+
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~---~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGY---EVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC---eEEEEEeCh
Confidence 57999999 9999999999999987 798888654
No 490
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=81.66 E-value=1.1 Score=41.56 Aligned_cols=34 Identities=15% Similarity=0.115 Sum_probs=29.7
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
+.+|.|||.|.-|...|..|++.|+ +|++++.++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~---~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPG---GVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTT---CEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC---eEEEEeCCH
Confidence 4689999999999999999999987 698887553
No 491
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=81.64 E-value=2 Score=40.51 Aligned_cols=38 Identities=16% Similarity=0.218 Sum_probs=31.2
Q ss_pred CCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 012165 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (469)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~ 86 (469)
.....+|.|||+|..|.+.|..|...+. -.+++++|..
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~-~~el~L~Di~ 53 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDL-ADELALVDVI 53 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTC-CSEEEEECSC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCC-CceEEEEeCC
Confidence 3455789999999999999999999876 4579998854
No 492
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=81.61 E-value=1.5 Score=40.04 Aligned_cols=32 Identities=9% Similarity=0.141 Sum_probs=28.8
Q ss_pred cEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 53 EFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 53 ~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
+|.|||+|.-|...|..|.+.|+ +|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~---~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGH---EVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC---EEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCC---CEEEEEcCc
Confidence 69999999999999999999987 799988654
No 493
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=81.61 E-value=1.5 Score=41.45 Aligned_cols=35 Identities=14% Similarity=0.265 Sum_probs=29.2
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 50 ENREFVIVGG-GNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 50 ~~~~vvIIGg-G~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
.+++|+|.|| |.-|...+..|.+.|+ +|+++.+.+
T Consensus 9 ~~~~IlVtGatG~iG~~l~~~L~~~g~---~V~~l~R~~ 44 (346)
T 3i6i_A 9 PKGRVLIAGATGFIGQFVATASLDAHR---PTYILARPG 44 (346)
T ss_dssp --CCEEEECTTSHHHHHHHHHHHHTTC---CEEEEECSS
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCC---CEEEEECCC
Confidence 3468999999 9999999999999986 688887654
No 494
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=81.61 E-value=1.6 Score=35.85 Aligned_cols=30 Identities=27% Similarity=0.350 Sum_probs=27.5
Q ss_pred hcCCeEEEEcCChHHHHHHHHHHhCCCeEe
Q 012165 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTT 234 (469)
Q Consensus 205 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~v~ 234 (469)
..+++++|+|+|.+|..++..|.+.|.++.
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~ 46 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVV 46 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEE
Confidence 467899999999999999999999998887
No 495
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=81.56 E-value=1.3 Score=43.31 Aligned_cols=36 Identities=19% Similarity=0.288 Sum_probs=30.8
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEc
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVS 84 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie 84 (469)
....+++|+|+|-||.+++..|.+.|.+..+|+|++
T Consensus 184 l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 184 ISEITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp TTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 345789999999999999999999986224899998
No 496
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=81.49 E-value=1.5 Score=40.60 Aligned_cols=35 Identities=11% Similarity=0.348 Sum_probs=29.9
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 012165 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (469)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~ 86 (469)
..++++|||+|.+|.++|..|.+.|.. +|+++++.
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~--~V~v~nR~ 174 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAE--RIDMANRT 174 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCS--EEEEECSS
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCC--EEEEEeCC
Confidence 457899999999999999999998753 78888754
No 497
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=81.39 E-value=1.8 Score=39.54 Aligned_cols=36 Identities=28% Similarity=0.494 Sum_probs=30.2
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 012165 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (469)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~ 86 (469)
...++++|+|+|-+|-+++..|.+.|.. +|+++++.
T Consensus 118 l~~k~~lvlGaGg~~~aia~~L~~~G~~--~v~i~~R~ 153 (272)
T 3pwz_A 118 LRNRRVLLLGAGGAVRGALLPFLQAGPS--ELVIANRD 153 (272)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTCCS--EEEEECSC
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCCC--EEEEEeCC
Confidence 3567999999999999999999998853 78887654
No 498
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=81.33 E-value=1.7 Score=39.83 Aligned_cols=36 Identities=22% Similarity=0.588 Sum_probs=30.0
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~ 86 (469)
+.+|.|||+|.-|.+.|..|.+.|++..+|++.+++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~ 38 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRS 38 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCC
Confidence 467999999999999999999998744478887654
No 499
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=81.32 E-value=1.8 Score=40.72 Aligned_cols=35 Identities=20% Similarity=0.379 Sum_probs=29.5
Q ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 012165 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (469)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~ 87 (469)
+.+|.|||+|..|...|..|+..|+- +|+++|.+.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~--~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLG--DVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCC--EEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC--eEEEEeCCH
Confidence 35899999999999999999998862 499988653
No 500
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=81.13 E-value=2.1 Score=41.85 Aligned_cols=40 Identities=15% Similarity=0.252 Sum_probs=32.8
Q ss_pred cCCCCCCcEEEEcCcHHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 012165 46 SFANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (469)
Q Consensus 46 ~~~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (469)
|+..++++|+|+|+|..|...+..+++.|+ ++.+++..+.
T Consensus 14 ~~~~~~~~ili~g~g~~g~~~~~a~~~~G~---~v~~v~~~~~ 53 (433)
T 2dwc_A 14 ATTDSAQKILLLGSGELGKEIAIEAQRLGV---EVVAVDRYAN 53 (433)
T ss_dssp TTSTTCCEEEEESCSHHHHHHHHHHHHTTC---EEEEEESSTT
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCCC---EEEEEECCCC
Confidence 334455789999999999999999999988 7888887654
Done!