Query 012166
Match_columns 469
No_of_seqs 151 out of 381
Neff 3.1
Searched_HMMs 13730
Date Mon Mar 25 04:04:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012166.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/012166hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2ckxa1 a.4.1.3 (A:578-660) Te 99.8 1.1E-19 7.8E-24 146.1 9.5 78 340-424 1-78 (83)
2 d1w0ua_ a.4.1.4 (A:) Telomeric 99.6 8.4E-17 6.1E-21 120.5 6.8 53 339-393 2-54 (55)
3 d1w0ta_ a.4.1.4 (A:) DNA-bindi 99.6 2.4E-16 1.8E-20 117.0 6.6 52 338-391 1-52 (52)
4 d1gvda_ a.4.1.3 (A:) c-Myb, DN 99.1 1.9E-11 1.4E-15 90.4 5.6 49 339-391 3-51 (52)
5 d1guua_ a.4.1.3 (A:) c-Myb, DN 99.1 2.6E-11 1.9E-15 88.6 5.9 48 340-391 2-49 (50)
6 d1x58a1 a.4.1.1 (A:8-56) Hypot 98.9 7.2E-10 5.2E-14 81.8 6.2 49 339-389 1-49 (49)
7 d1gv2a2 a.4.1.3 (A:144-190) c- 98.9 8.5E-10 6.2E-14 80.1 5.4 47 339-390 1-47 (47)
8 d1x41a1 a.4.1.1 (A:8-54) Trans 98.9 1.5E-09 1.1E-13 78.6 5.8 44 341-388 3-46 (47)
9 d2cu7a1 a.4.1.3 (A:8-72) MYSM1 98.8 7.2E-09 5.3E-13 77.9 7.6 50 340-394 3-52 (65)
10 d2cqra1 a.4.1.3 (A:7-66) DnaJ 98.8 4.6E-09 3.3E-13 78.6 6.0 51 334-388 7-60 (60)
11 d2cjja1 a.4.1.3 (A:8-70) Radia 98.6 2.6E-08 1.9E-12 75.2 6.2 47 340-390 2-51 (63)
12 d1igna1 a.4.1.6 (A:360-445) DN 98.5 4.1E-08 3E-12 79.1 4.8 52 339-394 1-57 (86)
13 d2iw5b1 a.4.1.3 (B:376-440) RE 98.4 2.9E-07 2.1E-11 69.3 6.2 50 336-390 2-51 (65)
14 d1xc5a1 a.4.1.3 (A:413-480) Nu 98.3 1.9E-07 1.4E-11 71.0 4.5 53 334-391 12-64 (68)
15 d1ug2a_ a.4.1.3 (A:) 2610100b2 97.4 0.00014 9.9E-09 59.9 7.0 50 338-392 32-84 (95)
16 d1irza_ a.4.1.11 (A:) Arr10-B 97.3 0.00026 1.9E-08 54.2 6.7 54 335-390 3-61 (64)
17 d2crga1 a.4.1.3 (A:8-64) Metas 97.2 0.00035 2.5E-08 51.6 6.3 49 341-393 3-51 (57)
18 d2cqqa1 a.4.1.3 (A:8-66) DnaJ 95.8 0.0069 5E-07 45.5 5.6 47 340-391 2-51 (59)
19 d1ofcx2 a.4.1.13 (X:851-978) S 95.0 0.011 7.8E-07 50.4 4.8 53 340-392 50-113 (128)
20 d1fexa_ a.4.1.3 (A:) Rap1 {Hum 86.2 0.74 5.4E-05 34.0 5.9 49 339-390 2-58 (59)
21 d1wgxa_ a.4.1.3 (A:) Hypotheti 51.2 16 0.0012 28.0 6.0 47 338-388 7-56 (73)
22 d1ofcx1 a.4.1.3 (X:799-850) SA 46.6 9.3 0.00068 27.5 3.8 40 341-384 1-40 (52)
23 d2fnaa1 a.4.5.11 (A:284-356) H 28.4 22 0.0016 26.9 3.5 61 349-420 10-72 (73)
24 d1dlja1 a.100.1.4 (A:197-294) 26.6 6.7 0.00049 30.2 0.1 43 99-148 21-63 (98)
No 1
>d2ckxa1 a.4.1.3 (A:578-660) Telomere binding protein TBP1 {Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Probab=99.79 E-value=1.1e-19 Score=146.12 Aligned_cols=78 Identities=28% Similarity=0.643 Sum_probs=67.3
Q ss_pred CCCCHHHHHHHHHHHhhcCCCChHHHHHHhcCCCCCCChhhHHHHHHHhhhhcccccccCCCCCccccccCCCHHHHHHH
Q 012166 340 RMWTLSEVMKLIDGISQFGVGKWTDIKRLLFSSSSHRTPIDLRDKWRNLLRASYAHQKNKGEVDPKHAMRSLPKPVLCRI 419 (469)
Q Consensus 340 r~WT~EEveaLv~GVeKyG~G~W~~Il~~~f~if~~RT~VDLKDKWRNLlK~s~~~~~~r~~~~rK~~~~~iP~~lL~RV 419 (469)
|+||.||+++|++||++||.|+|+.|.+.++..|.+||++|||||||||+++.....+.+++. ++|+++|++|
T Consensus 1 r~WT~eEd~~L~~~V~~~G~~~W~~I~~~~~~~~~~Rt~~qck~RWrn~l~~~~~~~~~~~~~-------~~p~ell~~v 73 (83)
T d2ckxa1 1 RPFSVAEVEALVEAVEHLGTGRWRDVKMRAFDNADHRTYVDLKDKWKTLVHTASIAPQQRRGE-------PVPQDLLDRV 73 (83)
T ss_dssp CCCCHHHHHHHHHHHHHHCSSCHHHHHHHHCTTCTTSCHHHHHHHHHHHHHHHHSCGGGCCSS-------CCCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCcccHHHHHHHHHhhccCCCHHHHHHHHHHHhhhhccCcccccCC-------CCCHHHHHHH
Confidence 689999999999999999999999999988767899999999999999999877654433332 3799999999
Q ss_pred HHhhh
Q 012166 420 RELAT 424 (469)
Q Consensus 420 reLA~ 424 (469)
.++.+
T Consensus 74 ~~~~~ 78 (83)
T d2ckxa1 74 LAAHA 78 (83)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 97654
No 2
>d1w0ua_ a.4.1.4 (A:) Telomeric repeat binding factor 2, TRF2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=8.4e-17 Score=120.50 Aligned_cols=53 Identities=26% Similarity=0.639 Sum_probs=49.2
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCChHHHHHHhcCCCCCCChhhHHHHHHHhhhhcc
Q 012166 339 QRMWTLSEVMKLIDGISQFGVGKWTDIKRLLFSSSSHRTPIDLRDKWRNLLRASY 393 (469)
Q Consensus 339 rr~WT~EEveaLv~GVeKyG~G~W~~Il~~~f~if~~RT~VDLKDKWRNLlK~s~ 393 (469)
+++||++|+++|++||++||.|+|+.|+..++ |.+||++||+||||||+|...
T Consensus 2 r~~WT~eEd~~L~~~V~~~G~~~W~~I~~~~~--~~~Rt~~q~k~Rwrn~~k~~~ 54 (55)
T d1w0ua_ 2 KQKWTVEESEWVKAGVQKYGEGNWAAISKNYP--FVNRTAVMIKDRWRTMKRLGM 54 (55)
T ss_dssp CCCCCHHHHHHHHHHHHHHCTTCHHHHHHHSC--CSSCCHHHHHHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHHHHhCCChHHHHHhhcC--CCCcCHHHHHHHHHHHhcCCC
Confidence 56899999999999999999999999999886 579999999999999999764
No 3
>d1w0ta_ a.4.1.4 (A:) DNA-binding domain of human telomeric protein, hTRF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=2.4e-16 Score=116.96 Aligned_cols=52 Identities=27% Similarity=0.637 Sum_probs=47.7
Q ss_pred CCCCCCHHHHHHHHHHHhhcCCCChHHHHHHhcCCCCCCChhhHHHHHHHhhhh
Q 012166 338 NQRMWTLSEVMKLIDGISQFGVGKWTDIKRLLFSSSSHRTPIDLRDKWRNLLRA 391 (469)
Q Consensus 338 ~rr~WT~EEveaLv~GVeKyG~G~W~~Il~~~f~if~~RT~VDLKDKWRNLlK~ 391 (469)
++++||+||+++|++||++||.|+|+.|.+.++ +.+||++||+|||+||.|.
T Consensus 1 kr~~WT~eED~~L~~~v~~~G~~~W~~I~~~~~--~~~Rt~~q~r~Rw~nl~K~ 52 (52)
T d1w0ta_ 1 KRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYK--FNNRTSVMLKDRWRTMKKL 52 (52)
T ss_dssp CCCCCCHHHHHHHHHHHHHHCTTCHHHHHHHSC--CSSCCHHHHHHHHHHHHTC
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCHHHHHhhcC--CCCCCHHHHHHHHHHHHCc
Confidence 367899999999999999999999999998875 5799999999999999873
No 4
>d1gvda_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.15 E-value=1.9e-11 Score=90.42 Aligned_cols=49 Identities=29% Similarity=0.591 Sum_probs=44.5
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCChHHHHHHhcCCCCCCChhhHHHHHHHhhhh
Q 012166 339 QRMWTLSEVMKLIDGISQFGVGKWTDIKRLLFSSSSHRTPIDLRDKWRNLLRA 391 (469)
Q Consensus 339 rr~WT~EEveaLv~GVeKyG~G~W~~Il~~~f~if~~RT~VDLKDKWRNLlK~ 391 (469)
+.+||.+|++.|+++|++||.++|+.|.+.+ .+||..+|+++|+|.+.+
T Consensus 3 rg~WT~eED~~L~~~v~~~g~~~W~~Ia~~l----~~Rt~~qc~~Rw~~~L~P 51 (52)
T d1gvda_ 3 KGPWTKEEDQRLIKLVQKYGPKRWSVIAKHL----KGRIGKQCRERWHNHLNP 51 (52)
T ss_dssp CCSCCHHHHHHHHHHHHHHCTTCHHHHHTTS----TTCCHHHHHHHHHHTTSC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH----CCCCHHHHHHHHHhhCCC
Confidence 5689999999999999999999999998754 599999999999998754
No 5
>d1guua_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.13 E-value=2.6e-11 Score=88.57 Aligned_cols=48 Identities=29% Similarity=0.558 Sum_probs=43.7
Q ss_pred CCCCHHHHHHHHHHHhhcCCCChHHHHHHhcCCCCCCChhhHHHHHHHhhhh
Q 012166 340 RMWTLSEVMKLIDGISQFGVGKWTDIKRLLFSSSSHRTPIDLRDKWRNLLRA 391 (469)
Q Consensus 340 r~WT~EEveaLv~GVeKyG~G~W~~Il~~~f~if~~RT~VDLKDKWRNLlK~ 391 (469)
.+||.+|++.|+++|++||.++|+.|...+ .+||+.+|+++|+|.+.+
T Consensus 2 ~~WT~eED~~L~~~v~~~g~~~W~~Ia~~~----~~Rt~~qcr~Rw~~~L~P 49 (50)
T d1guua_ 2 TRWTREEDEKLKKLVEQNGTDDWKVIANYL----PNRTDVQCQHRWQKVLNP 49 (50)
T ss_dssp CCCCHHHHHHHHHHHHHHCSSCHHHHHHTS----TTCCHHHHHHHHHHHHSC
T ss_pred CCCCHHHHHHHHHHHHHHCCCCHHHHHHHH----CCCCHHHHHHHHHhhCCC
Confidence 569999999999999999999999999754 489999999999998754
No 6
>d1x58a1 a.4.1.1 (A:8-56) Hypothetical protein 4930532d21rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.92 E-value=7.2e-10 Score=81.78 Aligned_cols=49 Identities=27% Similarity=0.470 Sum_probs=43.9
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCChHHHHHHhcCCCCCCChhhHHHHHHHhh
Q 012166 339 QRMWTLSEVMKLIDGISQFGVGKWTDIKRLLFSSSSHRTPIDLRDKWRNLL 389 (469)
Q Consensus 339 rr~WT~EEveaLv~GVeKyG~G~W~~Il~~~f~if~~RT~VDLKDKWRNLl 389 (469)
|+.||.||+..|..||++||. .|..|+..|+- -.+|++|||..|++.|+
T Consensus 1 Rknft~eEv~YL~~GVK~~G~-~WNsILWs~PF-~~GR~~vdLA~Ky~~l~ 49 (49)
T d1x58a1 1 RKDFTKEEVNYLFHGVKTMGN-HWNSILWSFPF-QKGRRAVDLAHKYHRLI 49 (49)
T ss_dssp SSSCCHHHHHHHHHHHHHHCS-CHHHHHHHSCC-CTTCCHHHHHHHHHHHH
T ss_pred CCcccHHHHHHHHHHHHHhcc-hhhhhhhccCC-CCCchhhHHHHHHHhhC
Confidence 467999999999999999997 99999999841 28999999999999874
No 7
>d1gv2a2 a.4.1.3 (A:144-190) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.89 E-value=8.5e-10 Score=80.08 Aligned_cols=47 Identities=26% Similarity=0.618 Sum_probs=42.6
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCChHHHHHHhcCCCCCCChhhHHHHHHHhhh
Q 012166 339 QRMWTLSEVMKLIDGISQFGVGKWTDIKRLLFSSSSHRTPIDLRDKWRNLLR 390 (469)
Q Consensus 339 rr~WT~EEveaLv~GVeKyG~G~W~~Il~~~f~if~~RT~VDLKDKWRNLlK 390 (469)
+.+||.||++.|++.|++||. +|+.|...+ .+||..+||.+|.+++|
T Consensus 1 K~~WT~eED~~L~~~v~~~G~-~W~~Ia~~~----~gRt~~~~knr~~~~lr 47 (47)
T d1gv2a2 1 KTSWTEEEDRIIYQAHKRLGN-RWAEIAKLL----PGRTDNAIKNHWNSTMR 47 (47)
T ss_dssp CCCCCHHHHHHHHHHHHHHSS-CHHHHHTTC----TTCCHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHHhh-HHHHHHhHc----CCCCHHHHHHHHHHHcC
Confidence 368999999999999999998 999998643 59999999999999876
No 8
>d1x41a1 a.4.1.1 (A:8-54) Transcriptional adaptor 2-like, TADA2L, isoform b {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.86 E-value=1.5e-09 Score=78.57 Aligned_cols=44 Identities=23% Similarity=0.573 Sum_probs=40.9
Q ss_pred CCCHHHHHHHHHHHhhcCCCChHHHHHHhcCCCCCCChhhHHHHHHHh
Q 012166 341 MWTLSEVMKLIDGISQFGVGKWTDIKRLLFSSSSHRTPIDLRDKWRNL 388 (469)
Q Consensus 341 ~WT~EEveaLv~GVeKyG~G~W~~Il~~~f~if~~RT~VDLKDKWRNL 388 (469)
.||.+|++.|+++|++||.++|..|..... +||+.+|+.+|.+.
T Consensus 3 ~Wt~eEd~~L~~~v~~~G~~nW~~Ia~~~~----~Rt~~Qcr~r~~~~ 46 (47)
T d1x41a1 3 SWTAQEEMALLEAVMDCGFGNWQDVANQMC----TKTKEECEKHYMKY 46 (47)
T ss_dssp SSCHHHHHHHHHHHHHTCTTCHHHHHHHHT----TSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCccHHHHHHHcC----CCCHHHHHHHHHHh
Confidence 399999999999999999999999998764 89999999999875
No 9
>d2cu7a1 a.4.1.3 (A:8-72) MYSM1 (KIAA1915) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.78 E-value=7.2e-09 Score=77.93 Aligned_cols=50 Identities=26% Similarity=0.590 Sum_probs=43.9
Q ss_pred CCCCHHHHHHHHHHHhhcCCCChHHHHHHhcCCCCCCChhhHHHHHHHhhhhccc
Q 012166 340 RMWTLSEVMKLIDGISQFGVGKWTDIKRLLFSSSSHRTPIDLRDKWRNLLRASYA 394 (469)
Q Consensus 340 r~WT~EEveaLv~GVeKyG~G~W~~Il~~~f~if~~RT~VDLKDKWRNLlK~s~~ 394 (469)
..||.||++.|+++|++||. +|..|...+ .+||..+|+.+|.++++....
T Consensus 3 ~~WT~eEd~~l~~~~~~~G~-~W~~Ia~~~----~~Rt~~q~k~ry~~~~~~~~k 52 (65)
T d2cu7a1 3 VKWTIEEKELFEQGLAKFGR-RWTKISKLI----GSRTVLQVKSYARQYFKNKVK 52 (65)
T ss_dssp CCCCHHHHHHHHHHHHHTCS-CHHHHHHHH----SSSCHHHHHHHHHHHHHHHSC
T ss_pred CCCCHHHHHHHHHHHHHhcc-hHHHHHHHc----CCCCHHHHHHHHHHHHHHHHh
Confidence 46999999999999999995 999998754 489999999999999876543
No 10
>d2cqra1 a.4.1.3 (A:7-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.76 E-value=4.6e-09 Score=78.62 Aligned_cols=51 Identities=22% Similarity=0.395 Sum_probs=44.3
Q ss_pred ccCCCCCCCCHHHHHHHHHHHhhcCCC---ChHHHHHHhcCCCCCCChhhHHHHHHHh
Q 012166 334 DRRKNQRMWTLSEVMKLIDGISQFGVG---KWTDIKRLLFSSSSHRTPIDLRDKWRNL 388 (469)
Q Consensus 334 krRK~rr~WT~EEveaLv~GVeKyG~G---~W~~Il~~~f~if~~RT~VDLKDKWRNL 388 (469)
+.+..+.+||.+|++.|+++|.+||.| +|..|...+ .+||+.||+.+|+.|
T Consensus 7 ~~~~~~~~WT~eEd~~L~~~v~~~~~~~~~~W~~IA~~l----~~Rt~~qc~~R~~~L 60 (60)
T d2cqra1 7 RARSAEEPWTQNQQKLLELALQQYPRGSSDCWDKIARCV----PSKSKEDCIARYKLL 60 (60)
T ss_dssp TTTCSSCCCCHHHHHHHHHHHHHSCSSSHHHHHHHGGGC----SSSCHHHHHHHHHHH
T ss_pred cCCcCCCCcCHHHHHHHHHHHHHcCCccchHHHHHHHHc----CCCCHHHHHHHHHHC
Confidence 345567789999999999999999987 599998654 499999999999876
No 11
>d2cjja1 a.4.1.3 (A:8-70) Radialis {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]}
Probab=98.61 E-value=2.6e-08 Score=75.17 Aligned_cols=47 Identities=19% Similarity=0.527 Sum_probs=42.4
Q ss_pred CCCCHHHHHHHHHHHhhcCCCC---hHHHHHHhcCCCCCCChhhHHHHHHHhhh
Q 012166 340 RMWTLSEVMKLIDGISQFGVGK---WTDIKRLLFSSSSHRTPIDLRDKWRNLLR 390 (469)
Q Consensus 340 r~WT~EEveaLv~GVeKyG~G~---W~~Il~~~f~if~~RT~VDLKDKWRNLlK 390 (469)
++||.+|++.|+++|++||.|. |..|.... .+||..+|+.+|..|++
T Consensus 2 ~~WT~eEd~~L~~~v~~~~~~~~~~W~~Ia~~l----~gRt~~qc~~r~~~L~~ 51 (63)
T d2cjja1 2 RPWSAKENKAFERALAVYDKDTPDRWANVARAV----EGRTPEEVKKHYEILVE 51 (63)
T ss_dssp CSCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHS----TTCCHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHCCCCchHHHHHHHHc----CCCCHHHHHHHHHHHHH
Confidence 5799999999999999999874 99999765 48999999999988864
No 12
>d1igna1 a.4.1.6 (A:360-445) DNA-binding domain of rap1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.50 E-value=4.1e-08 Score=79.13 Aligned_cols=52 Identities=15% Similarity=0.256 Sum_probs=45.3
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCC-----hHHHHHHhcCCCCCCChhhHHHHHHHhhhhccc
Q 012166 339 QRMWTLSEVMKLIDGISQFGVGK-----WTDIKRLLFSSSSHRTPIDLRDKWRNLLRASYA 394 (469)
Q Consensus 339 rr~WT~EEveaLv~GVeKyG~G~-----W~~Il~~~f~if~~RT~VDLKDKWRNLlK~s~~ 394 (469)
+.+||.||++.|++.|++||..+ |+.|...+ .+||..+|+++|+|.+.+...
T Consensus 1 k~~WT~eED~~L~~~v~~~g~~~~~~~~W~~IA~~l----pgRt~~qcr~Rw~~~L~p~l~ 57 (86)
T d1igna1 1 KASFTDEEDEFILDVVRKNPTRRTTHTLYDEISHYV----PNHTGNSIRHRFRVYLSKRLE 57 (86)
T ss_dssp CCCCCHHHHHHHHHHHHTSGGGTTCSHHHHHHTTTS----TTSCHHHHHHHHHHTTGGGCC
T ss_pred CCCCCHHHHHHHHHHHHHhCcCcCCccCHHHHHHHc----CCCCHHHHHHHHHHHcCcccc
Confidence 46899999999999999999754 99997654 599999999999999987654
No 13
>d2iw5b1 a.4.1.3 (B:376-440) REST corepressor 1, CoREST {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.36 E-value=2.9e-07 Score=69.31 Aligned_cols=50 Identities=18% Similarity=0.427 Sum_probs=44.3
Q ss_pred CCCCCCCCHHHHHHHHHHHhhcCCCChHHHHHHhcCCCCCCChhhHHHHHHHhhh
Q 012166 336 RKNQRMWTLSEVMKLIDGISQFGVGKWTDIKRLLFSSSSHRTPIDLRDKWRNLLR 390 (469)
Q Consensus 336 RK~rr~WT~EEveaLv~GVeKyG~G~W~~Il~~~f~if~~RT~VDLKDKWRNLlK 390 (469)
+|...+||++|.+.|.++|.+||. +|..|...+. +||..||+++|.++.|
T Consensus 2 ~k~~~~WT~eE~~~f~~~~~~~G~-~w~~Ia~~~~----~kt~~q~~~~y~~~~k 51 (65)
T d2iw5b1 2 QKCNARWTTEEQLLAVQAIRKYGR-DFQAISDVIG----NKSVVQVKNFFVNYRR 51 (65)
T ss_dssp CCCCSSCCHHHHHHHHHHHHHHSS-CHHHHHHHHS----SCCHHHHHHHHHHTTT
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCc-hHHHHHHHcC----CCCHHHHHHHHHHHHh
Confidence 345677999999999999999996 8999998764 8999999999998875
No 14
>d1xc5a1 a.4.1.3 (A:413-480) Nuclear receptor corepressor 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.32 E-value=1.9e-07 Score=71.03 Aligned_cols=53 Identities=15% Similarity=0.156 Sum_probs=45.8
Q ss_pred ccCCCCCCCCHHHHHHHHHHHhhcCCCChHHHHHHhcCCCCCCChhhHHHHHHHhhhh
Q 012166 334 DRRKNQRMWTLSEVMKLIDGISQFGVGKWTDIKRLLFSSSSHRTPIDLRDKWRNLLRA 391 (469)
Q Consensus 334 krRK~rr~WT~EEveaLv~GVeKyG~G~W~~Il~~~f~if~~RT~VDLKDKWRNLlK~ 391 (469)
+.|+...+||.+|.+.|+.+|.+||. +|..|...+ .+||..||+..|.+..|.
T Consensus 12 ~~~~~~~~WT~eE~~~f~~~~~~~G~-~w~~Ia~~~----~~rt~~q~~~~yy~~kk~ 64 (68)
T d1xc5a1 12 KDRQVMNMWSEQEKETFREKFMQHPK-NFGLIASFL----ERKTVAECVLYYYLTKKN 64 (68)
T ss_dssp TSTTTTTCCCTTTHHHHHHHHHHTTS-CSSSHHHHT----TTSCHHHHHHHHHHHTTT
T ss_pred ccccCCCCCCHHHHHHHHHHHHHHCC-cHHHHHHHc----CCCCHHHHHHHHHHHHCc
Confidence 34667789999999999999999996 999999754 499999999999876653
No 15
>d1ug2a_ a.4.1.3 (A:) 2610100b20rik gene product {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.42 E-value=0.00014 Score=59.92 Aligned_cols=50 Identities=18% Similarity=0.401 Sum_probs=44.7
Q ss_pred CCCCCCHHHHHHHHHHHhhcCCCC---hHHHHHHhcCCCCCCChhhHHHHHHHhhhhc
Q 012166 338 NQRMWTLSEVMKLIDGISQFGVGK---WTDIKRLLFSSSSHRTPIDLRDKWRNLLRAS 392 (469)
Q Consensus 338 ~rr~WT~EEveaLv~GVeKyG~G~---W~~Il~~~f~if~~RT~VDLKDKWRNLlK~s 392 (469)
+...||.||+..|++.++++|. + |..|...+. +||..+++.||+.|++.-
T Consensus 32 ~~~~WTrEEDriIL~~~q~~G~-~~~tw~~Ia~~L~----~Rs~~qvr~Rf~~Lm~lf 84 (95)
T d1ug2a_ 32 KVVLWTREADRVILTMCQEQGA-QPHTFSVISQQLG----NKTPVEVSHRFRELMQLF 84 (95)
T ss_dssp CCSSSCHHHHHHHHHHHHHTTS-CTTTHHHHHHHHS----SCCHHHHHHHHHHHHHHH
T ss_pred ccCCcCHHHHHHHHHHHHHcCC-cHHHHHHHHHHcC----CCCHHHHHHHHHHHHHHH
Confidence 4667999999999999999996 5 999997764 999999999999999853
No 16
>d1irza_ a.4.1.11 (A:) Arr10-B {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=97.28 E-value=0.00026 Score=54.23 Aligned_cols=54 Identities=22% Similarity=0.383 Sum_probs=44.2
Q ss_pred cCCCCCCCCHHHHHHHHHHHhhcCCCCh--HHHHHHhcCCCCCCChhhHH---HHHHHhhh
Q 012166 335 RRKNQRMWTLSEVMKLIDGISQFGVGKW--TDIKRLLFSSSSHRTPIDLR---DKWRNLLR 390 (469)
Q Consensus 335 rRK~rr~WT~EEveaLv~GVeKyG~G~W--~~Il~~~f~if~~RT~VDLK---DKWRNLlK 390 (469)
.+|+|..||+||-+.+++||++||.++| +.|+.... ..++|..+++ .|||..++
T Consensus 3 ~kk~R~~WT~elH~~Fv~Av~~lG~~~atpk~I~~~m~--v~~lT~~qV~SHlQKYrl~l~ 61 (64)
T d1irza_ 3 QKKPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMN--VDKLTRENVASHLQKFRVALK 61 (64)
T ss_dssp CCCSSCSSCHHHHHHHHHHHHHHCTTTCCHHHHHHHHC--CTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhCccccchHHHHHHcC--CCCCCHHHHHHHHHHHHHHHH
Confidence 3667888999999999999999998777 57887764 4789999988 67776554
No 17
>d2crga1 a.4.1.3 (A:8-64) Metastasis associated protein MTA3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.19 E-value=0.00035 Score=51.64 Aligned_cols=49 Identities=12% Similarity=0.333 Sum_probs=42.5
Q ss_pred CCCHHHHHHHHHHHhhcCCCChHHHHHHhcCCCCCCChhhHHHHHHHhhhhcc
Q 012166 341 MWTLSEVMKLIDGISQFGVGKWTDIKRLLFSSSSHRTPIDLRDKWRNLLRASY 393 (469)
Q Consensus 341 ~WT~EEveaLv~GVeKyG~G~W~~Il~~~f~if~~RT~VDLKDKWRNLlK~s~ 393 (469)
.||++|...+.+|+.+||. +|..|.+.+. .+||..||.+-+-+..|...
T Consensus 3 ~WT~eE~~~F~~~~~~yGK-df~~I~~~~v---~~Ks~~~~v~fYY~~Kkt~~ 51 (57)
T d2crga1 3 EWSASEACLFEEALEKYGK-DFNDIRQDFL---PWKSLTSIIEYYYMWKTTDR 51 (57)
T ss_dssp CCCHHHHHHHHHHHHHTCS-CHHHHHHTTC---SSSCHHHHHHHHHHHHTCCS
T ss_pred CCCHHHHHHHHHHHHHHcc-cHHHHHHHHc---CCCCHHHHHHHHHHHhCCch
Confidence 6999999999999999998 9999987653 59999999999887666443
No 18
>d2cqqa1 a.4.1.3 (A:8-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.81 E-value=0.0069 Score=45.46 Aligned_cols=47 Identities=26% Similarity=0.484 Sum_probs=40.7
Q ss_pred CCCCHHHHHHHHHHHhhcCCC---ChHHHHHHhcCCCCCCChhhHHHHHHHhhhh
Q 012166 340 RMWTLSEVMKLIDGISQFGVG---KWTDIKRLLFSSSSHRTPIDLRDKWRNLLRA 391 (469)
Q Consensus 340 r~WT~EEveaLv~GVeKyG~G---~W~~Il~~~f~if~~RT~VDLKDKWRNLlK~ 391 (469)
..||.+|...|.+++.+|-.| +|..|.... +||.-++..+++.|...
T Consensus 2 ~eWT~ee~~~le~Al~~~P~gt~~RW~~IA~~v-----gkt~~ev~~~~k~l~e~ 51 (59)
T d2cqqa1 2 PEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHEL-----GRSVTDVTTKAKQLKDS 51 (59)
T ss_dssp CCCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHH-----TSCHHHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHHCCCCCcHHHHHHHHHH-----CCCHHHHHHHHHHHHHh
Confidence 469999999999999999754 899998765 59999999999877643
No 19
>d1ofcx2 a.4.1.13 (X:851-978) SLIDE domain of the nucleosome remodeling ATPase ISWI {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=95.03 E-value=0.011 Score=50.42 Aligned_cols=53 Identities=19% Similarity=0.344 Sum_probs=45.2
Q ss_pred CCCCHHHHHHHHHHHhhcCCCC---hHHHHHHh-------cCC-CCCCChhhHHHHHHHhhhhc
Q 012166 340 RMWTLSEVMKLIDGISQFGVGK---WTDIKRLL-------FSS-SSHRTPIDLRDKWRNLLRAS 392 (469)
Q Consensus 340 r~WT~EEveaLv~GVeKyG~G~---W~~Il~~~-------f~i-f~~RT~VDLKDKWRNLlK~s 392 (469)
+.+|.+|+..|+-.+.+||.|+ |..|+... |+- |..||+.+|..+--+|+++-
T Consensus 50 k~yteeEDRfLl~~~~~~G~~~~~~~e~ir~~Ir~~p~FrFDwf~kSRt~~el~rR~~tLi~~i 113 (128)
T d1ofcx2 50 KNYTEIEDRFLVCMLHKLGFDKENVYEELRAAIRASPQFRFDWFIKSRTALELQRRCNTLITLI 113 (128)
T ss_dssp SSCCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHCGGGTTCHHHHTCCHHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHhcCCCccHHHHHHHHHHhCcchhhhhHhccCCHHHHHHHHHHHHHHH
Confidence 3599999999999999999999 99987652 443 38999999999999999863
No 20
>d1fexa_ a.4.1.3 (A:) Rap1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.20 E-value=0.74 Score=34.05 Aligned_cols=49 Identities=16% Similarity=0.337 Sum_probs=38.0
Q ss_pred CCCCCHHHHHHHHHHHhhcCC------C--ChHHHHHHhcCCCCCCChhhHHHHHHHhhh
Q 012166 339 QRMWTLSEVMKLIDGISQFGV------G--KWTDIKRLLFSSSSHRTPIDLRDKWRNLLR 390 (469)
Q Consensus 339 rr~WT~EEveaLv~GVeKyG~------G--~W~~Il~~~f~if~~RT~VDLKDKWRNLlK 390 (469)
|.++|.+|+.+|++=|.++.. | =|+.+.+. ....+|-...||+|+.-+|
T Consensus 2 R~~fT~eeD~~l~~yv~~~~~~~~~~~Gn~iwk~l~~~---~~~~HtwQSwrdRY~K~L~ 58 (59)
T d1fexa_ 2 RIAFTDADDVAILTYVKENARSPSSVTGNALWKAMEKS---SLTQHSWQSLKDRYLKHLR 58 (59)
T ss_dssp CCCCCHHHHHHHHHHHHHTCCSTTTTTSSHHHHHHHHS---CSSSCCSHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHhccCcCCccHHHHHHHHHHh---cCCCCCHHHHHHHHHHHhc
Confidence 678999999999999998853 2 27666532 2358999999999977654
No 21
>d1wgxa_ a.4.1.3 (A:) Hypothetical protein C14orf106 (KIAA1903) {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.17 E-value=16 Score=27.97 Aligned_cols=47 Identities=19% Similarity=0.413 Sum_probs=38.9
Q ss_pred CCCCCCHHHHHHHHHHHhhc---CCCChHHHHHHhcCCCCCCChhhHHHHHHHh
Q 012166 338 NQRMWTLSEVMKLIDGISQF---GVGKWTDIKRLLFSSSSHRTPIDLRDKWRNL 388 (469)
Q Consensus 338 ~rr~WT~EEveaLv~GVeKy---G~G~W~~Il~~~f~if~~RT~VDLKDKWRNL 388 (469)
.-..|+.+|...|-.++.-+ -.|-|.++..... .||+-.|..||---
T Consensus 7 ~d~~W~e~ELqkLh~A~~SlPkh~~gfW~~VA~~VG----tRSaeECQ~ky~~~ 56 (73)
T d1wgxa_ 7 GDKEWNEKELQKLHCAFASLPKHKPGFWSEVAAAVG----SRSPEECQRKYMEN 56 (73)
T ss_dssp SSSCCCHHHHHHHHHHHHHSCSSSSSHHHHHHHHTT----TSCHHHHHHHHHHS
T ss_pred cccccCHHHHHHHHHHHHhcCCCCCccHHHHHHHHc----cCCHHHHHHHHHhC
Confidence 34579999999999999855 5689999997764 89999999998544
No 22
>d1ofcx1 a.4.1.3 (X:799-850) SANT domain of the nucleosome remodeling ATPase ISWI {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=46.62 E-value=9.3 Score=27.46 Aligned_cols=40 Identities=18% Similarity=0.402 Sum_probs=33.0
Q ss_pred CCCHHHHHHHHHHHhhcCCCChHHHHHHhcCCCCCCChhhHHHH
Q 012166 341 MWTLSEVMKLIDGISQFGVGKWTDIKRLLFSSSSHRTPIDLRDK 384 (469)
Q Consensus 341 ~WT~EEveaLv~GVeKyG~G~W~~Il~~~f~if~~RT~VDLKDK 384 (469)
.|+.-+-.+++.|.++||..+-..|...+ .+.|.-+++.=
T Consensus 1 ~WnrrdF~~Fi~a~ekyGR~d~~~Ia~e~----~~Kt~eEV~~Y 40 (52)
T d1ofcx1 1 AWTKRDFNQFIKANEKYGRDDIDNIAKDV----EGKTPEEVIEY 40 (52)
T ss_dssp TCCHHHHHHHHHHHHHHCTTCHHHHTTSS----TTCCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhhHHHHHHHh----cCCCHHHHHHH
Confidence 39999999999999999998888887655 46888777643
No 23
>d2fnaa1 a.4.5.11 (A:284-356) Hypothetical protein SSO1545, C-terminal domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=28.38 E-value=22 Score=26.94 Aligned_cols=61 Identities=18% Similarity=0.310 Sum_probs=39.9
Q ss_pred HHHHHHhhcCCCChHHHHHHhcCCCCCC--ChhhHHHHHHHhhhhcccccccCCCCCccccccCCCHHHHHHHH
Q 012166 349 KLIDGISQFGVGKWTDIKRLLFSSSSHR--TPIDLRDKWRNLLRASYAHQKNKGEVDPKHAMRSLPKPVLCRIR 420 (469)
Q Consensus 349 aLv~GVeKyG~G~W~~Il~~~f~if~~R--T~VDLKDKWRNLlK~s~~~~~~r~~~~rK~~~~~iP~~lL~RVr 420 (469)
..+++|. .| .+|++|++..-.. .+| +.--|..==+||.|.+.+....++ .-||.+++.++.
T Consensus 10 ~ILkaia-~G-~rWs~IK~yle~~-~G~~I~d~~ls~lL~nL~k~~~iek~~~~--------Y~i~DPv~~~al 72 (73)
T d2fnaa1 10 NIMRTLS-KC-GKWSDVKRALELE-EGIEISDSEIYNYLTQLTKHSWIIKEGEK--------YCPSEPLISLAF 72 (73)
T ss_dssp HHHHHHT-TC-BCHHHHHHHHHHH-HCSCCCHHHHHHHHHHHHHTTSEEESSSC--------EEESSHHHHHHT
T ss_pred HHHHHHH-cc-CcHHHHHHHHHHH-cCCCCChHHHHHHHHHHHHcCceeecCCe--------eccCcHHHHHhc
Confidence 3456666 45 5899999875221 244 445677888999999987542221 336888887764
No 24
>d1dlja1 a.100.1.4 (A:197-294) UDP-glucose dehydrogenase (UDPGDH), middle domain {Streptococcus pyogenes [TaxId: 1314]}
Probab=26.62 E-value=6.7 Score=30.23 Aligned_cols=43 Identities=19% Similarity=0.174 Sum_probs=30.2
Q ss_pred ccccccccccccccchhhhhhhcccCCCCCCCCccCCCCCCCCCCCCCCC
Q 012166 99 AANDLSTVCDDFLLDIEFTEKVAKFDCGPVEGSHLGNSSSESHSPGASGS 148 (469)
Q Consensus 99 ~~~~~s~~c~~~~ld~~~a~~~~~l~~gp~~~s~l~nssses~spg~sgs 148 (469)
-+|++..+|+.. .++..+.+..+...|.-|+|.. .+++||+|+
T Consensus 21 f~Ne~~~lc~~~--g~d~~~v~~~~~~d~~~~~~~~-----~pg~g~GG~ 63 (98)
T d1dlja1 21 YFNELDTYAESR--KLNSHMIIQGISYDDRIGMHYN-----NPSFGYGGY 63 (98)
T ss_dssp HHHHHHHHHHHT--TCCHHHHHHHHHTSTTTCSSSC-----CCCSSCCSS
T ss_pred HHHHHHHHHHHh--hccHHHHHHHHHhccccCCccc-----cCCCCcccc
Confidence 368899999995 5555555566666777776654 367888887
Done!