Query 012172
Match_columns 469
No_of_seqs 268 out of 1011
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 04:11:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012172.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012172hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3r3i_A UTP--glucose-1-phosphat 100.0 6E-111 2E-115 883.1 21.4 464 5-469 53-525 (528)
2 3gue_A UTP-glucose-1-phosphate 100.0 1E-104 4E-109 830.8 34.1 436 21-464 24-482 (484)
3 2icy_A Probable UTP-glucose-1- 100.0 8.7E-98 3E-102 785.2 36.9 465 5-469 5-469 (469)
4 2i5k_A UTP--glucose-1-phosphat 100.0 2.4E-95 8E-100 770.7 28.7 460 5-469 17-485 (488)
5 2oeg_A UTP-glucose-1-phosphate 100.0 8.6E-92 3E-96 742.8 32.2 448 8-465 12-488 (505)
6 3ogz_A UDP-sugar pyrophosphory 100.0 3.9E-80 1.3E-84 659.0 28.4 444 5-460 38-570 (630)
7 3oc9_A UDP-N-acetylglucosamine 100.0 1.4E-72 4.8E-77 580.0 24.5 326 68-401 22-384 (405)
8 2yqc_A UDP-N-acetylglucosamine 100.0 1.8E-69 6E-74 573.1 24.7 387 5-401 30-466 (486)
9 1jv1_A Glcnac1P uridyltransfer 100.0 7E-68 2.4E-72 562.8 29.3 374 5-387 27-440 (505)
10 3st8_A Bifunctional protein GL 100.0 1.5E-27 5E-32 254.2 24.2 337 78-469 11-395 (501)
11 4fce_A Bifunctional protein GL 99.9 1.6E-20 5.6E-25 196.5 27.1 310 78-468 7-328 (459)
12 2v0h_A Bifunctional protein GL 99.8 2.4E-19 8.3E-24 187.4 27.0 311 78-468 4-325 (456)
13 1hm9_A GLMU, UDP-N-acetylgluco 99.8 1.7E-18 5.9E-23 181.9 24.3 233 80-373 12-249 (468)
14 1yp2_A Glucose-1-phosphate ade 99.8 5.7E-17 2E-21 169.8 23.5 256 78-373 19-295 (451)
15 3brk_X Glucose-1-phosphate ade 99.7 1.3E-16 4.5E-21 165.8 24.5 338 78-468 11-382 (420)
16 2ggo_A 401AA long hypothetical 99.7 1.1E-14 3.9E-19 149.7 24.9 307 81-468 2-322 (401)
17 3oam_A 3-deoxy-manno-octuloson 99.6 1.4E-15 4.8E-20 147.7 11.0 235 79-375 2-250 (252)
18 3pnn_A Conserved domain protei 99.6 5E-14 1.7E-18 140.5 21.0 267 78-376 4-293 (303)
19 4evw_A Nucleoside-diphosphate- 99.6 1E-14 3.5E-19 142.0 12.1 231 82-376 2-249 (255)
20 4ecm_A Glucose-1-phosphate thy 99.5 3.4E-13 1.2E-17 131.8 20.6 233 79-375 24-260 (269)
21 3juk_A UDP-glucose pyrophospho 99.5 5E-13 1.7E-17 131.1 19.6 233 79-374 2-270 (281)
22 3k8d_A 3-deoxy-manno-octuloson 99.4 1.4E-11 4.7E-16 120.7 17.9 234 78-372 17-263 (264)
23 1fxo_A Glucose-1-phosphate thy 99.4 5.5E-11 1.9E-15 118.0 21.0 234 79-376 2-243 (293)
24 1mc3_A Glucose-1-phosphate thy 99.4 1.4E-11 5E-16 122.4 16.8 243 80-385 4-255 (296)
25 1tzf_A Glucose-1-phosphate cyt 99.3 9.4E-12 3.2E-16 120.0 14.4 237 79-373 2-249 (259)
26 3tqd_A 3-deoxy-manno-octuloson 99.3 4.2E-11 1.4E-15 116.7 18.5 232 78-370 8-254 (256)
27 1lvw_A Glucose-1-phosphate thy 99.3 9.9E-11 3.4E-15 116.3 21.1 242 80-385 4-255 (295)
28 4fcu_A 3-deoxy-manno-octuloson 99.3 1.9E-11 6.5E-16 118.9 15.0 232 80-372 2-248 (253)
29 1h7e_A 3-deoxy-manno-octuloson 99.3 2.2E-10 7.5E-15 109.5 21.9 229 79-374 2-239 (245)
30 1jyk_A LICC protein, CTP:phosp 99.3 4.6E-11 1.6E-15 115.9 16.4 219 79-373 25-251 (254)
31 2e3d_A UTP--glucose-1-phosphat 99.3 1.1E-10 3.8E-15 115.6 19.6 231 79-373 8-280 (302)
32 1vic_A 3-deoxy-manno-octuloson 99.3 3.2E-10 1.1E-14 110.0 21.0 238 79-374 2-253 (262)
33 2y6p_A 3-deoxy-manno-octuloson 99.3 2.5E-10 8.5E-15 108.3 18.5 224 79-372 2-231 (234)
34 2qh5_A PMI, ALGA, mannose-6-ph 99.2 7.8E-11 2.7E-15 117.5 15.1 190 79-310 4-204 (308)
35 3f1c_A Putative 2-C-methyl-D-e 99.2 8.7E-11 3E-15 113.2 14.4 227 79-378 3-238 (246)
36 2pa4_A UTP-glucose-1-phosphate 99.2 1.3E-10 4.6E-15 116.5 16.3 234 80-373 13-281 (323)
37 2ux8_A Glucose-1-phosphate uri 99.2 1.4E-10 4.9E-15 114.6 13.3 233 78-373 13-278 (297)
38 1ezi_A CMP-N-acetylneuraminic 99.1 4.5E-10 1.5E-14 106.4 13.6 217 79-373 4-224 (228)
39 1qwj_A Cytidine monophospho-N- 99.1 5.9E-10 2E-14 106.1 13.5 217 79-375 3-223 (229)
40 2x65_A Mannose-1-phosphate gua 99.0 1.5E-09 5.1E-14 109.8 12.9 186 80-310 2-206 (336)
41 3q80_A 2-C-methyl-D-erythritol 99.0 7.9E-09 2.7E-13 99.0 16.9 216 79-372 7-229 (231)
42 2cu2_A Putative mannose-1-phos 98.9 5.2E-09 1.8E-13 105.8 11.4 185 79-310 2-203 (337)
43 2xwl_A 2-C-methyl-D-erythritol 98.9 3.1E-08 1.1E-12 92.9 15.1 43 79-122 2-44 (223)
44 2xme_A CTP-inositol-1-phosphat 98.9 4.5E-08 1.6E-12 92.8 16.0 211 77-370 16-230 (232)
45 3rsb_A Adenosylcobinamide-phos 98.8 3.2E-08 1.1E-12 91.3 10.9 61 81-149 2-62 (196)
46 2vsh_A TARI, 2-C-methyl-D-eryt 98.8 1.7E-07 5.8E-12 88.5 16.0 66 80-150 3-69 (236)
47 1vgw_A 4-diphosphocytidyl-2C-m 98.7 6.3E-07 2.2E-11 84.4 19.3 65 78-149 5-69 (231)
48 2waw_A MOBA relate protein; un 98.6 1.7E-07 5.9E-12 85.9 11.4 60 79-147 5-64 (199)
49 2dpw_A Hypothetical protein TT 98.5 3.5E-07 1.2E-11 87.0 9.9 42 79-122 2-46 (232)
50 2wee_A MOBA-related protein; u 98.5 4.5E-07 1.5E-11 83.1 9.7 60 79-147 5-64 (197)
51 3d5n_A Q97W15_sulso; NESG, SSR 98.4 3.7E-07 1.3E-11 84.7 7.0 40 79-121 2-41 (197)
52 2yc3_A 2-C-methyl-D-erythritol 98.3 5.3E-07 1.8E-11 84.9 5.2 42 79-121 4-45 (228)
53 1e5k_A Molybdopterin-guanine d 98.3 3.7E-06 1.3E-10 78.3 10.6 41 78-120 5-45 (201)
54 3ngw_A Molybdopterin-guanine d 98.2 3.9E-06 1.3E-10 78.8 10.0 39 80-121 1-39 (208)
55 1vpa_A 2-C-methyl-D-erythritol 98.2 4.8E-07 1.6E-11 85.6 3.2 43 79-122 13-55 (234)
56 1i52_A 4-diphosphocytidyl-2-C- 98.1 1.1E-06 3.8E-11 83.3 3.9 62 78-145 6-67 (236)
57 2px7_A 2-C-methyl-D-erythritol 97.9 4.8E-06 1.6E-10 79.3 4.1 38 78-117 24-61 (236)
58 2e8b_A Probable molybdopterin- 97.9 3.1E-06 1.1E-10 78.6 2.2 40 79-121 14-53 (201)
59 1w55_A ISPD/ISPF bifunctional 97.8 1.3E-05 4.4E-10 82.0 4.5 42 79-121 3-44 (371)
60 3ixc_A Hexapeptide transferase 95.4 0.016 5.5E-07 52.9 5.3 38 429-466 74-118 (191)
61 3hjj_A Maltose O-acetyltransfe 94.9 0.033 1.1E-06 50.9 5.8 34 425-458 132-167 (190)
62 2pig_A Putative transferase; S 94.4 0.012 4.2E-07 59.0 1.9 49 420-468 76-125 (334)
63 3r1w_A Carbonic anhydrase; bet 94.1 0.048 1.7E-06 49.2 5.0 47 420-466 48-110 (189)
64 1xhd_A Putative acetyltransfer 94.1 0.056 1.9E-06 48.3 5.3 48 420-467 41-97 (173)
65 1xhd_A Putative acetyltransfer 93.7 0.077 2.6E-06 47.4 5.5 32 427-458 73-105 (173)
66 3ixc_A Hexapeptide transferase 93.0 0.091 3.1E-06 47.8 4.9 21 422-442 46-66 (191)
67 1v3w_A Ferripyochelin binding 93.0 0.096 3.3E-06 46.8 4.9 38 428-465 50-93 (173)
68 3tv0_A Dynactin subunit 6; LEF 93.0 0.12 4E-06 47.1 5.6 25 420-444 23-47 (194)
69 3nz2_A Hexapeptide-repeat cont 92.7 0.11 3.6E-06 47.7 4.8 36 424-459 129-166 (195)
70 3kwd_A Carbon dioxide concentr 92.6 0.13 4.5E-06 47.5 5.4 47 420-466 122-169 (213)
71 3r3r_A Ferripyochelin binding 92.6 0.097 3.3E-06 47.1 4.4 14 429-442 56-69 (187)
72 3vbi_A ANTD, galactoside O-ace 92.5 0.14 4.7E-06 46.9 5.3 39 420-458 63-106 (205)
73 3r3r_A Ferripyochelin binding 92.2 0.12 4.1E-06 46.5 4.5 39 420-458 26-69 (187)
74 3ftt_A Putative acetyltransfer 92.2 0.27 9.3E-06 45.0 7.0 35 425-459 128-164 (199)
75 2p2o_A Maltose transacetylase; 92.0 0.15 5E-06 46.5 4.8 35 425-459 128-164 (185)
76 3kwd_A Carbon dioxide concentr 91.8 0.19 6.6E-06 46.3 5.5 40 428-467 112-153 (213)
77 2wlg_A Polysialic acid O-acety 91.7 0.05 1.7E-06 50.5 1.3 15 355-369 7-21 (215)
78 3jqy_B NEUO, polysialic acid O 91.7 0.21 7.1E-06 47.5 5.7 24 421-444 117-143 (252)
79 3fs8_A QDTC; acetyltransferase 91.7 0.16 5.4E-06 48.6 4.9 23 421-443 32-54 (273)
80 3mc4_A WW/RSP5/WWP domain:bact 91.3 0.13 4.5E-06 50.3 3.9 32 428-459 217-250 (287)
81 3r0s_A Acyl-[acyl-carrier-prot 91.0 0.095 3.2E-06 50.4 2.6 40 420-459 45-99 (266)
82 2ggo_A 401AA long hypothetical 91.0 0.14 4.8E-06 51.6 4.0 39 421-460 292-331 (401)
83 1v3w_A Ferripyochelin binding 91.0 0.19 6.6E-06 44.8 4.5 48 420-467 21-78 (173)
84 3r8y_A 2,3,4,5-tetrahydropyrid 90.9 0.091 3.1E-06 49.6 2.3 47 421-467 133-190 (240)
85 1ssq_A SAT, serine acetyltrans 90.9 0.15 5.1E-06 49.4 3.8 31 428-458 190-222 (267)
86 3srt_A Maltose O-acetyltransfe 90.6 0.31 1.1E-05 44.3 5.5 37 425-461 130-168 (188)
87 2v0h_A Bifunctional protein GL 90.6 0.24 8.1E-06 50.7 5.3 50 420-469 258-309 (456)
88 1qre_A Carbonic anhydrase; bet 90.6 0.38 1.3E-05 45.5 6.3 45 420-464 151-196 (247)
89 3f1x_A Serine acetyltransferas 90.5 0.17 5.8E-06 50.1 3.9 31 429-459 253-285 (310)
90 3t57_A UDP-N-acetylglucosamine 90.5 0.12 4E-06 50.9 2.7 39 420-458 48-92 (305)
91 3eh0_A UDP-3-O-[3-hydroxymyris 90.5 0.11 3.7E-06 52.0 2.5 12 447-458 167-178 (341)
92 3r1w_A Carbonic anhydrase; bet 90.3 0.21 7.3E-06 44.8 4.1 42 420-461 30-76 (189)
93 3hsq_A Acyl-[acyl-carrier-prot 90.2 0.14 4.7E-06 49.0 2.9 40 420-459 41-95 (259)
94 4e79_A UDP-3-O-acylglucosamine 90.2 0.11 3.9E-06 52.2 2.4 12 447-458 172-183 (357)
95 3t57_A UDP-N-acetylglucosamine 90.1 0.24 8.1E-06 48.6 4.6 16 427-442 77-92 (305)
96 4eqy_A Acyl-[acyl-carrier-prot 90.0 0.28 9.5E-06 47.5 4.9 23 420-442 63-85 (283)
97 3c8v_A Putative acetyltransfer 89.8 0.17 5.9E-06 53.3 3.4 40 426-465 307-347 (496)
98 3mqg_A Lipopolysaccharides bio 89.5 0.15 5.3E-06 46.0 2.5 18 425-442 31-48 (192)
99 3r8y_A 2,3,4,5-tetrahydropyrid 89.3 0.15 5.1E-06 48.1 2.3 41 420-460 114-156 (240)
100 1qre_A Carbonic anhydrase; bet 89.3 0.29 9.9E-06 46.4 4.3 39 428-466 141-181 (247)
101 4eqy_A Acyl-[acyl-carrier-prot 89.3 0.15 5.1E-06 49.4 2.4 39 420-458 45-85 (283)
102 4e6u_A Acyl-[acyl-carrier-prot 89.3 0.19 6.6E-06 48.0 3.1 40 420-459 48-101 (265)
103 4e6u_A Acyl-[acyl-carrier-prot 88.7 0.35 1.2E-05 46.2 4.5 17 427-443 85-101 (265)
104 2pig_A Putative transferase; S 88.5 0.31 1.1E-05 48.7 4.0 50 419-468 56-108 (334)
105 1j2z_A Acyl-[acyl-carrier-prot 88.4 0.18 6.3E-06 48.6 2.3 23 420-442 42-64 (270)
106 3vbi_A ANTD, galactoside O-ace 88.3 0.31 1E-05 44.6 3.7 42 427-468 52-99 (205)
107 3q1x_A Serine acetyltransferas 88.2 0.23 7.9E-06 49.2 2.9 30 429-458 225-256 (313)
108 3pmo_A UDP-3-O-[3-hydroxymyris 88.2 0.21 7E-06 50.6 2.6 12 298-309 25-36 (372)
109 4fce_A Bifunctional protein GL 88.0 0.45 1.5E-05 48.6 5.1 52 418-469 259-312 (459)
110 3r0s_A Acyl-[acyl-carrier-prot 88.0 0.31 1.1E-05 46.7 3.6 18 426-443 82-99 (266)
111 3srt_A Maltose O-acetyltransfe 87.9 0.49 1.7E-05 42.9 4.7 15 422-436 97-111 (188)
112 2qia_A UDP-N-acetylglucosamine 87.8 0.47 1.6E-05 45.1 4.8 23 420-442 46-68 (262)
113 3ftt_A Putative acetyltransfer 87.6 0.45 1.6E-05 43.5 4.4 15 428-442 95-109 (199)
114 3fs8_A QDTC; acetyltransferase 87.5 0.28 9.6E-06 46.8 3.0 6 460-465 88-93 (273)
115 2qia_A UDP-N-acetylglucosamine 87.4 0.31 1.1E-05 46.4 3.2 40 420-459 28-69 (262)
116 2p2o_A Maltose transacetylase; 87.3 0.52 1.8E-05 42.8 4.5 23 421-443 86-110 (185)
117 1ocx_A Maltose O-acetyltransfe 87.2 0.62 2.1E-05 42.1 4.9 35 425-459 126-162 (182)
118 1t3d_A SAT, serine acetyltrans 86.9 0.4 1.4E-05 46.9 3.7 31 428-458 210-242 (289)
119 2wlg_A Polysialic acid O-acety 86.9 0.78 2.7E-05 42.2 5.5 34 427-460 79-117 (215)
120 3pmo_A UDP-3-O-[3-hydroxymyris 86.7 0.27 9.2E-06 49.8 2.4 32 427-458 167-200 (372)
121 2iu8_A LPXD, UDP-3-O-[3-hydrox 86.6 0.28 9.7E-06 49.5 2.5 16 290-305 74-89 (374)
122 3hsq_A Acyl-[acyl-carrier-prot 86.2 0.4 1.4E-05 45.6 3.2 19 425-443 77-95 (259)
123 3brk_X Glucose-1-phosphate ade 86.1 0.46 1.6E-05 48.3 3.9 41 420-461 351-392 (420)
124 1krr_A Galactoside O-acetyltra 86.0 1 3.6E-05 41.5 5.9 36 424-459 128-165 (203)
125 1j2z_A Acyl-[acyl-carrier-prot 85.7 0.56 1.9E-05 45.1 4.0 16 428-443 80-95 (270)
126 3c8v_A Putative acetyltransfer 85.5 0.36 1.2E-05 50.9 2.7 42 427-468 325-372 (496)
127 1hm9_A GLMU, UDP-N-acetylgluco 85.4 0.38 1.3E-05 49.5 2.8 24 420-443 285-308 (468)
128 3tv0_A Dynactin subunit 6; LEF 85.3 1.1 3.6E-05 40.6 5.5 15 428-442 52-66 (194)
129 1ocx_A Maltose O-acetyltransfe 85.1 0.79 2.7E-05 41.4 4.5 18 426-443 91-108 (182)
130 3hjj_A Maltose O-acetyltransfe 84.8 0.59 2E-05 42.3 3.5 61 365-442 50-113 (190)
131 3mc4_A WW/RSP5/WWP domain:bact 84.8 0.69 2.3E-05 45.2 4.2 47 421-467 184-241 (287)
132 4e79_A UDP-3-O-acylglucosamine 84.4 0.51 1.7E-05 47.4 3.1 48 420-467 125-175 (357)
133 3f1x_A Serine acetyltransferas 84.4 0.63 2.2E-05 46.0 3.7 22 446-467 254-276 (310)
134 3nz2_A Hexapeptide-repeat cont 84.3 0.49 1.7E-05 43.1 2.7 17 427-443 96-112 (195)
135 1yp2_A Glucose-1-phosphate ade 84.1 0.61 2.1E-05 47.8 3.7 19 450-468 389-407 (451)
136 2iu8_A LPXD, UDP-3-O-[3-hydrox 83.8 0.41 1.4E-05 48.3 2.2 21 422-442 149-169 (374)
137 3jqy_B NEUO, polysialic acid O 83.4 1 3.6E-05 42.6 4.8 35 427-461 105-144 (252)
138 3eh0_A UDP-3-O-[3-hydroxymyris 83.0 0.42 1.4E-05 47.6 1.8 49 420-468 120-171 (341)
139 4ea9_A Perosamine N-acetyltran 82.7 0.47 1.6E-05 43.9 1.9 22 421-442 123-144 (220)
140 3gos_A 2,3,4,5-tetrahydropyrid 82.6 0.65 2.2E-05 44.9 2.9 15 428-442 178-192 (276)
141 3eg4_A 2,3,4,5-tetrahydropyrid 80.9 0.73 2.5E-05 45.3 2.6 13 428-440 203-215 (304)
142 3bfp_A Acetyltransferase; LEFT 80.8 0.62 2.1E-05 42.3 2.0 48 420-467 100-150 (194)
143 4hur_A Virginiamycin A acetylt 80.4 0.53 1.8E-05 43.8 1.4 38 422-459 114-153 (220)
144 1krr_A Galactoside O-acetyltra 79.6 0.95 3.3E-05 41.8 2.8 15 428-442 96-110 (203)
145 1ssq_A SAT, serine acetyltrans 79.3 1.5 5.1E-05 42.3 4.2 47 421-467 157-214 (267)
146 3tk8_A 2,3,4,5-tetrahydropyrid 79.2 0.71 2.4E-05 45.7 1.9 33 427-459 218-252 (316)
147 3eev_A Chloramphenicol acetylt 79.1 0.7 2.4E-05 42.6 1.7 38 422-459 106-145 (212)
148 3eg4_A 2,3,4,5-tetrahydropyrid 79.1 1.1 3.6E-05 44.1 3.1 46 421-466 170-226 (304)
149 1t3d_A SAT, serine acetyltrans 76.7 1.9 6.4E-05 42.1 4.1 46 421-466 177-233 (289)
150 3gos_A 2,3,4,5-tetrahydropyrid 76.6 1.4 4.8E-05 42.6 3.1 23 420-442 144-166 (276)
151 3q1x_A Serine acetyltransferas 75.6 2.1 7.1E-05 42.3 4.1 21 446-466 226-247 (313)
152 4hur_A Virginiamycin A acetylt 74.1 0.99 3.4E-05 41.9 1.3 15 427-441 66-80 (220)
153 3fsy_A Tetrahydrodipicolinate 73.7 1.4 5E-05 43.5 2.4 31 428-458 234-264 (332)
154 1xat_A Xenobiotic acetyltransf 73.5 1.2 4.2E-05 41.3 1.7 39 422-460 105-145 (212)
155 3fsy_A Tetrahydrodipicolinate 72.4 1.8 6.1E-05 42.9 2.6 39 428-467 208-256 (332)
156 3r5d_A Tetrahydrodipicolinate 70.6 2.2 7.7E-05 42.5 2.9 31 428-458 257-287 (347)
157 3r5d_A Tetrahydrodipicolinate 70.4 2.1 7.2E-05 42.7 2.7 40 428-468 231-280 (347)
158 3eev_A Chloramphenicol acetylt 69.7 3.9 0.00014 37.4 4.3 13 422-434 112-124 (212)
159 3st8_A Bifunctional protein GL 69.4 2.5 8.7E-05 44.0 3.3 18 204-221 46-63 (501)
160 2rij_A Putative 2,3,4,5-tetrah 68.7 1.6 5.4E-05 44.4 1.4 43 423-466 260-312 (387)
161 3tk8_A 2,3,4,5-tetrahydropyrid 66.8 2.5 8.5E-05 41.7 2.4 46 421-466 186-242 (316)
162 4e8l_A Virginiamycin A acetylt 64.3 2.4 8.1E-05 39.5 1.6 37 423-459 114-152 (219)
163 1mr7_A Streptogramin A acetylt 63.4 2.3 8E-05 39.2 1.4 38 422-459 108-147 (209)
164 3bcv_A Putative glycosyltransf 34.6 1.4E+02 0.0049 26.2 8.6 61 97-161 4-66 (240)
165 1xat_A Xenobiotic acetyltransf 28.7 24 0.00081 32.4 2.0 35 420-460 121-155 (212)
166 2rij_A Putative 2,3,4,5-tetrah 28.6 28 0.00096 35.2 2.7 31 428-459 291-322 (387)
167 2i5e_A Hypothetical protein MM 27.2 34 0.0012 30.7 2.8 40 79-122 3-47 (211)
168 4e8l_A Virginiamycin A acetylt 24.6 39 0.0013 31.1 2.8 35 420-460 129-163 (219)
169 1mr7_A Streptogramin A acetylt 21.2 39 0.0013 30.8 2.0 35 420-460 124-158 (209)
No 1
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=100.00 E-value=6.3e-111 Score=883.12 Aligned_cols=464 Identities=53% Similarity=0.898 Sum_probs=418.7
Q ss_pred HHHHHHHHHHh-hhhcccChhHHHHHHHHHHHHhhcCCCCccCCccccCCCCccccCCCCCCCCCChhhHHHhccceeEE
Q 012172 5 AEKLTQLKSAV-AGLNQISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDKIVVPCDSLAPVPEDPAETKKLLDKLVVL 83 (469)
Q Consensus 5 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~l~k~avv 83 (469)
+++|.+|.+.+ +..++....+++.|.++|+||+++....++|++|+|++++.+.+|++++.++ ..+....+++|+|||
T Consensus 53 ~~~l~~~~~~l~~~~~~~~~~el~~f~~lf~r~l~~~~~~~~~~~i~p~p~~~~~~~~~l~~~~-~~~~~~~~l~kvavv 131 (528)
T 3r3i_A 53 KKELEKILTTASSHEFEHTKKDLDGFRKLFHRFLQEKGPSVDWGKIQRPPEDSIQPYEKIKARG-LPDNISSVLNKLVVV 131 (528)
T ss_dssp TSSSTTTSSSCCTTTTHHHHHHHHHHHHHHHHHHHC-------CCCCCCCTTTSEEHHHHTTSC-CCCSSCTTCTTEEEE
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHCcCCCHHHccCHhhcCCcc-ccchhhhhcCceEEE
Confidence 55677777777 4566678899999999999999988779999999999999999998886422 122346789999999
Q ss_pred EEcCCCCCcCCCCCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCCCCceEEEEec
Q 012172 84 KLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQS 163 (469)
Q Consensus 84 iLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~~~~i~~f~Q~ 163 (469)
+||||||||||+++||++++|++|+||||++++|+++++++||+.||||||||++||++|++||++|.+.+.+|++|+|+
T Consensus 132 lLaGGlGTRLG~~~PK~~i~V~sgktflql~~eqI~~l~~~~g~~IPl~IMTS~~T~~~T~~~f~k~~~fg~~V~~F~Q~ 211 (528)
T 3r3i_A 132 KLNGGLGTSMGCKGPKSLIGVRNENTFLDLTVQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQKYNHCRVKIYTFNQS 211 (528)
T ss_dssp EECCCBCTTTTCSSBGGGSEEETTEEHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHSSCGGGTTSSCCEEEEECC
T ss_pred EeCCCCccccCCCCCccceecCCCCcHHHHHHHHHHHHHHHhCCCCCEEEEeccchhHHHHHHHHhcCccCCCeEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999987666789999999
Q ss_pred CcceecCCCCcccCCCCC---CCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCccccccccHHHHHHHHHc-
Q 012172 164 QYPRLCADDFVPLPCKGK---TDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVDLKILNHLIQN- 239 (469)
Q Consensus 164 ~~P~l~~~~~~~~~~~~~---~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DNL~~~~dp~~Lg~~~~~- 239 (469)
++||++.+|+++++++.+ +++++|+|+||||+|.+|+++|+|++|+++|++|+||+|+||+++.+||.+|||++.+
T Consensus 212 ~~P~i~~dg~l~l~~~~~~~~~~~~~~~P~GhGdiy~aL~~sGlLd~l~~~Gieyi~v~nvDNlga~vDp~~Lg~~~~~~ 291 (528)
T 3r3i_A 212 RYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFIGEGKEYIFVSNIDNLGATVDLYILNHLMNPP 291 (528)
T ss_dssp CBCCEETTTCCCC-------------CBCCBTTTHHHHHHHHSHHHHHHHTTCCEEEEEETTBTTCCCCHHHHHHHSSCS
T ss_pred CeeeEecCCceecccccccCCCcceeeCcCCChHHHHHHHHCChHHHHHhcCCEEEEEEccCCcccccCHHHHHHHHhcc
Confidence 999999999999987532 5789999999999999999999999999999999999999996677899999999998
Q ss_pred ---CCcceEEEeeeccCCCcceEEEEeCCeeEEEEeccCChhhhhhccccccccEEEEEeEEEeHHHHHHHHHhcccccc
Q 012172 240 ---KNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKME 316 (469)
Q Consensus 240 ---~~~~~~~v~~k~~~~~~~G~iv~~~g~~~ivEy~~~~~e~~~~~~~~~~~~~~Nt~~~~~~l~~L~~~l~~~~~~lp 316 (469)
+++++|+|++|+.+++++|++|+++|++++|||+|+|++++++|++..+|++|||||+||++++|+++++...+.||
T Consensus 292 ~~~~~d~~~kVv~Kt~~dek~Gvl~~~dGk~~vvEyseip~e~~~~~~g~~~f~~~Ntnnlw~~L~~L~~v~~~~~l~Lp 371 (528)
T 3r3i_A 292 NGKRCEFVMEVTNKTRADVKGGTLTQYEGKLRLVEIAQVPKAHVDEFKSVSKFKIFNTNNLWISLAAVKRLQEQNAIDME 371 (528)
T ss_dssp SSCCCSEEEEECCCCTTCCSSCEEECSSSSCEEECTTSSCGGGTTTSSCSSSCCCCEEEEEEEEHHHHHHHHHTTCCCCC
T ss_pred cccCCcEEEEEeEccccCCcccEEEEECCeEEEEEecCCChhHhhccCCcccCCeEEEEEEEEEHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998889999
Q ss_pred cccCCCcCC-CcceehhHHHhhhHhhhcccceeEeecCccccccCCchhHHHHHHHHHHhhcCceeecCCccCCCCCeEE
Q 012172 317 IIPNPKEVD-GIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLYTLADGFVTRNEARKNPANPTIE 395 (469)
Q Consensus 317 ~~~n~K~~~-g~~~iqle~~~~d~~~~~~~~~~v~v~r~eF~pVKn~~dL~~~~~~~~~l~~g~l~~~~~r~~~~~p~V~ 395 (469)
+|+|+|+++ +++++|+|+++||+|++|+++.+++|+|+||+||||++||++++||+|.+.+|.+.++|+|.++..|.|.
T Consensus 372 ~ivn~K~vd~~~~viqlEt~igd~i~~f~~~~~i~VpR~rF~PvKn~sdLll~~Sdly~l~~g~l~~~~~r~~~~~P~v~ 451 (528)
T 3r3i_A 372 IIVNAKTLDGGLNVIQLETAVGAAIKSFENSLGINVPRSRFLPVKTTSDLLLVMSNLYSLNAGSLTMSEKREFPTVPLVK 451 (528)
T ss_dssp CEEEEECCSSSSCEEEEEBCSTTCSTTSSSCCCEECCGGGCCBCCSHHHHHHHHSTTSEEETTEEECCSSCSSCCCCEEE
T ss_pred ceecCcccCCCCCEEEeHHHHHHHHHhccCcEEEEEehHHcccccchHHHHHHhcceeEeeCCeEEecccccCCCCCEEE
Confidence 999999997 7889999999999999999999999999999999999999999999999999999999999878889999
Q ss_pred ECCCcccccccccccccCCcccccCceEEEeeEEECCCcEEeeeEEEEecCCCceeeCCCCeeecceecCCCCC
Q 012172 396 LGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEINGPGDL 469 (469)
Q Consensus 396 l~~~~~~~~~~~~~i~~~p~~~~~~~l~v~G~v~fg~~V~i~g~~~I~~~~~~~~~I~~~s~le~~~v~~~~~~ 469 (469)
|+|.|+++++|++||+++|||+++++|+|+|||+||+||+++|+|+|.+++|.+++||+|++|||++|.+||||
T Consensus 452 L~~~~~~v~~f~~rf~~iP~l~~~~~LtV~Gdv~fg~~v~l~G~v~i~~~~g~~~~ip~g~~len~~v~g~~~~ 525 (528)
T 3r3i_A 452 LGSSFTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIANHGDRIDIPPGAVLENKIVSGNLRI 525 (528)
T ss_dssp ECTTSCSHHHHHHHCSSCCEEEEEEEEEEESEEECCTTCEEEEEEEEECCTTCEEECCTTCEEEEEEEC-----
T ss_pred eCcccCcHHHHHHhCCCCCCcccCCEEEEecceEECCCcEEEEEEEEEcCCCCceecCCCCEEeccEEeccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997
No 2
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=100.00 E-value=1e-104 Score=830.78 Aligned_cols=436 Identities=38% Similarity=0.618 Sum_probs=411.1
Q ss_pred cChhHHHHHHHHHHHHhhcCCCCccCCccccCCCCccccCCCCCCCCCChhhHHHhccceeEEEEcCCCCCcCCCCCCcc
Q 012172 21 ISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDKIVVPCDSLAPVPEDPAETKKLLDKLVVLKLNGGLGTTMGCTGPKS 100 (469)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~l~k~avviLAGG~GTRmg~~~PK~ 100 (469)
..+.+++.|.++|++|++++++.|+|++|+|+. ++++|+++... . .|+++|+|+|||+||||||||||+++||+
T Consensus 24 ~~~~~~~~f~~~~~~~~~~~~~~i~~~~i~p~~--~~~~~~~l~~~---~-~G~~~L~kvavvlLaGGlGTRLG~~~pKg 97 (484)
T 3gue_A 24 VEEKCIHIFLIQHALVRKGETGYIPEKSISPVE--SLPFLQGIETK---G-ENTALLRQAVVLKLNGGLGTGMGLNGPKS 97 (484)
T ss_dssp CCHHHHHHHHHHHHHHHTTCCCCCCGGGCEECC--CCCBHHHHCCS---S-CCHHHHTTEEEEEEECCCCGGGTCSSCGG
T ss_pred CCHHHHHHHHHHHHHHhcCCCCccCHhhCCChh--ccCChhhcCCc---h-HHHHHHhhcEEEEEcCCcccccCCCCCce
Confidence 778999999999999999999999999999987 67888888631 2 69999999999999999999999999999
Q ss_pred ccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhc--C-CCCceEEEEecCcceecCCCCcccC
Q 012172 101 VIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYS--K-SNVEIHTFNQSQYPRLCADDFVPLP 177 (469)
Q Consensus 101 l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~--g-~~~~i~~f~Q~~~P~l~~~~~~~~~ 177 (469)
++++.+|+||||++++|+++++++|++.|||+||||+.||++|++||++|. | .+.+|++|+|+++||++.+|+.++.
T Consensus 98 ~~~v~sgksflql~~eqI~~l~~~~~~~iPl~IMTS~~T~~~T~~~~~k~~~Fgl~~~~v~~F~Q~~~P~i~~dg~~~i~ 177 (484)
T 3gue_A 98 LLQVKNGQTFLDFTALQLEHFRQVRNCNVPFMLMNSFSTSGETKNFLRKYPTLYEVFDSDIELMQNRVPKIRQDNFFPVT 177 (484)
T ss_dssp GSEEETTEEHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHHHGGGCHHHHTTCCCCCEEECCCEECEETTTCCBCC
T ss_pred eeecCCCCcHHHHHHHHHHHHHHHcCCCceEEEECCcchhHHHHHHHHhCcccCCCccceEEEEeCceeeEecCCCceee
Confidence 999999999999999999999999999999999999999999999999854 5 3568999999999999999987776
Q ss_pred CCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCccccccccHHHHHHHHHcCCcceEEEeeeccCCCcc
Q 012172 178 CKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKG 257 (469)
Q Consensus 178 ~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DNL~~~~dp~~Lg~~~~~~~~~~~~v~~k~~~~~~~ 257 (469)
++. +++++|+|+||||+|.+|+++|+|++|+++|++|+||+|+|||++++||.+|||+++++++++++|++|+.+++++
T Consensus 178 ~~~-~~~i~~~P~GhGdiy~aL~~sGiLd~l~~~Gieyi~v~~vDNL~a~~Dp~~lG~~~~~~~d~~~kvv~Kt~~dekg 256 (484)
T 3gue_A 178 YEA-DPTCEWVPPGHGDVYTVLYSSGKLDYLLGKGYRYMFISNGDNLGATLDVRLLDYMHEKQLGFLMEVCRRTESDKKG 256 (484)
T ss_dssp CTT-CGGGGEECCCGGGHHHHHHHHSHHHHHHHTTCCEEEEEETTCTTCCCCHHHHHHHHHTTCSEEEEEEECCTTCCSS
T ss_pred cCC-CCceeeccCCchHHHHHHHhCCcHHHHHHcCCEEEEEEcCCCcccccCHHHHHHHHhcCCCEEEEEEECCCCCCce
Confidence 543 3689999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEe----------CCeeEEEEeccCChhhhhhccccccccEEEEEeEEEeHHHHHHHHHhc--ccccccccCCCcCC
Q 012172 258 GTLISY----------EGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEAD--ALKMEIIPNPKEVD 325 (469)
Q Consensus 258 G~iv~~----------~g~~~ivEy~~~~~e~~~~~~~~~~~~~~Nt~~~~~~l~~L~~~l~~~--~~~lp~~~n~K~~~ 325 (469)
|++|++ +|+++++||+|+|++++++|++..++.+|||||+|+++.+|++++++. .+.||+|+|+|+++
T Consensus 257 G~l~~~~~~~~~~~~~dG~~~vvEyseip~e~~~~f~~~~g~~~FNtnNi~~~l~~l~~~l~~~~g~~~Lp~~vn~K~id 336 (484)
T 3gue_A 257 GHLAYKDVIDETTGQTRRRFVLRESAQCPKEDEDSFQNIAKHCFFNTNNIWINLMELKKMMDEQLGVLRLPVMRNPKTVN 336 (484)
T ss_dssp EEEEEEC--------CCCEEEEEEGGGSCGGGHHHHTCTTTSCEEEEEEEEEEHHHHHHHHHHTTTCCCCCCEEEEEESS
T ss_pred eEEEEEccccccccCCCCCEEEEEeccCCHHHHhhhcCCCCceEeEeeeEEEEHHHHHHHHHhccCcCCCCcEeccceec
Confidence 999998 999999999999999999998888999999999999999999999975 57899999999996
Q ss_pred -----CcceehhHHHhhhHhhhcccceeEeecCccccccCCchhHHHHHHHHHHhhc-CceeecCCccCCCCCeEEECCC
Q 012172 326 -----GIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLYTLAD-GFVTRNEARKNPANPTIELGPE 399 (469)
Q Consensus 326 -----g~~~iqle~~~~d~~~~~~~~~~v~v~r~eF~pVKn~~dL~~~~~~~~~l~~-g~l~~~~~r~~~~~p~V~l~~~ 399 (469)
.++++|||+|+||+|++|+++.+++|+|+||+||||++||+++|||+|.+.+ |.+..+|+|. +..|.|.|+|.
T Consensus 337 ~~k~~~~~~iqlE~~~~d~~~~~~~~~~ieV~R~rF~PvKn~sdLl~~~Sdly~l~~~~~l~~~~~~~-~~~P~v~L~~~ 415 (484)
T 3gue_A 337 PQDSQSTKVYQLEVAMGAAISLFDRSEAVVVPRERFAPVKTCSDLLALRSDAYQVTEDQRLVLCEERN-GKPPAIDLDGE 415 (484)
T ss_dssp TTCTTSCEEEEEECCGGGGGTTSSSEEEEECCGGGCCCCSSHHHHHHHHSTTEEECTTSCEEECGGGT-TCCCEEEECTT
T ss_pred CCCCCCCCEeehHHHHHHHHHhCCccEEEEEChhhccccccchHHHHHhhhceeccCCceEEeccccC-CCCCeEEECch
Confidence 3679999999999999999999999999999999999999999999999998 4899999995 57899999875
Q ss_pred -ccccccccccccc-CCcccccCceEEEeeEEECCCcEEeeeEEEEecCCCceeeCCCCeeecceec
Q 012172 400 -FKKVGNFLSRFKS-IPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEIN 464 (469)
Q Consensus 400 -~~~~~~~~~~i~~-~p~~~~~~~l~v~G~v~fg~~V~i~g~~~I~~~~~~~~~I~~~s~le~~~v~ 464 (469)
|+++++|++||++ +|||+++++|+|+|||+||+||+++|+|+|.|++|++++||+|++|||++|.
T Consensus 416 ~~~~v~~f~~rf~~giPsl~~~~~L~V~Gdv~fg~~v~l~G~v~i~~~~g~~~~ip~g~~l~~~~~~ 482 (484)
T 3gue_A 416 HYKMIDGFEKLVKGGVPSLRQCTSLTVRGLVEFGADVSVRGNVVIKNLKEEPLIIGSGRVLDNEVVV 482 (484)
T ss_dssp TSSSHHHHHHHHTTCCCBCTTEEEEEEESSEEECTTCEEEEEEEEEECSSSCEEECTTCEEESCEEE
T ss_pred hcCcHHHHHHhcCCCCCChhhCCEEEEecceEECCCcEEEEEEEEEcCCCCeeecCCCCEecceecC
Confidence 8999999999988 9999999999999999999999999999999999999999999999999985
No 3
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=100.00 E-value=8.7e-98 Score=785.23 Aligned_cols=465 Identities=85% Similarity=1.303 Sum_probs=432.2
Q ss_pred HHHHHHHHHHhhhhcccChhHHHHHHHHHHHHhhcCCCCccCCccccCCCCccccCCCCCCCCCChhhHHHhccceeEEE
Q 012172 5 AEKLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDKIVVPCDSLAPVPEDPAETKKLLDKLVVLK 84 (469)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~l~k~avvi 84 (469)
+++|++|..+++...+.++.+++.|.++|++|++++++.++|++|+|++++.+.+|++++...++++.|+++|+++++|+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~g~~~l~k~~vvi 84 (469)
T 2icy_A 5 TENLPQLKSAVDGLTEMSESEKSGFISLVSRYLSGEAQHIEWSKIQTPTDEIVVPYEKMTPVSQDVAETKNLLDKLVVLK 84 (469)
T ss_dssp CCCHHHHHHHHHHCTTSCHHHHHHHHHHHHHHC------CCGGGCBCCCTTTEEEGGGSCCCCSCHHHHHHHHTTEEEEE
T ss_pred HHHHHHHHhhcCchhccchhhHHHHHHHHHHHHhccCCCCcccccccCCcccccChhhcccchhhHHHHHHhhccceEEE
Confidence 67899999998666666999999999999999988767899999999999989999988643456778999999999999
Q ss_pred EcCCCCCcCCCCCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCCCCceEEEEecC
Q 012172 85 LNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQ 164 (469)
Q Consensus 85 LAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~~~~i~~f~Q~~ 164 (469)
||||+|||||++.||+|+||++|+||||++++++++++.+||+.|||+||||++|++.|++||++|...+.+|++|.|++
T Consensus 85 LAGGlGTRLg~~~PK~llpv~~gkp~Le~~i~~l~~~~~~~G~~ip~vimts~~t~e~t~~~f~~~~~fG~~I~~f~Q~~ 164 (469)
T 2icy_A 85 LNGGLGTTMGCTGPKSVIEVRDGLTFLDLIVIQIENLNNKYGCKVPLVLMNSFNTHDDTHKIVEKYTNSNVDIHTFNQSK 164 (469)
T ss_dssp EECCBSGGGTCCSBGGGSEEETTEEHHHHHHHHHHHHHHHHSCCCCEEEEECTTTHHHHHHHHGGGTTSSSCEEEEECCC
T ss_pred EcCCccccCCCCCCccccccCCCCCHHHHHHHHHHHHHHhcCCCccEEEEeCCCCHHHHHHHHHhcccCCceEEEEEecc
Confidence 99999999999999999999779999999999999999999999999999999999999999998765456899999999
Q ss_pred cceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCccccccccHHHHHHHHHcCCcce
Q 012172 165 YPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVDLKILNHLIQNKNEYC 244 (469)
Q Consensus 165 ~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DNL~~~~dp~~Lg~~~~~~~~~~ 244 (469)
+||++.+|+++++++.++++++|+|+||||+|.+|.++|+|++|+++|.+|++|+|+|||++.+||.++||+.+++++++
T Consensus 165 ~P~i~~e~~~~l~~~~~~~~~e~~P~GtGG~~~~L~~sGll~~l~~~G~e~~~V~n~DnL~~~~d~~ll~~~~~~~a~~t 244 (469)
T 2icy_A 165 YPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSDNLGAIVDLTILKHLIQNKNEYC 244 (469)
T ss_dssp EECEETTTTEEGGGGTCCSGGGEECCCGGGHHHHHHHHSHHHHHHTTTCCEEEEEETTBTTCCCCHHHHHHHHHHTCSEE
T ss_pred eeeEccccCccccCCCCCccccCCcCCchHHHHHHHhcCcHHHHHhcCCCEEEEEECCcCCcccCHHHHHHHHHcCCCee
Confidence 99999999999998877788999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeeccCCCcceEEEEeCCeeEEEEeccCChhhhhhccccccccEEEEEeEEEeHHHHHHHHHhcccccccccCCCcC
Q 012172 245 MEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEV 324 (469)
Q Consensus 245 ~~v~~k~~~~~~~G~iv~~~g~~~ivEy~~~~~e~~~~~~~~~~~~~~Nt~~~~~~l~~L~~~l~~~~~~lp~~~n~K~~ 324 (469)
|+|++++.+++++|+++.++|+++++||+|.|++++++|++...+++||||+|||++++|++++++....||+|+|+|++
T Consensus 245 ~~v~~k~~~~~~~Gvl~~~dg~~~vvE~~e~p~~~~~e~k~~~~~~~~N~g~y~~~~~~L~~i~~~~~~~lp~~v~~K~i 324 (469)
T 2icy_A 245 MEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKKLVEADALKMEIIPNPKEV 324 (469)
T ss_dssp EEEEECCTTCCSSCEEEEETTEEEEECGGGSCGGGHHHHHSSSSCCEEEEEEEEEEHHHHHHHHHTTCCCCCCBCCEEEE
T ss_pred EEEEEeccCCCceeEEEEECCEEEEEEEeccChhhhhhhccccccceeeEEEEEEcHHHHHHHHhcccCCchhhccceec
Confidence 99999999999999999999999999999999988877766789999999999999999999999878999999999999
Q ss_pred CCcceehhHHHhhhHhhhcccceeEeecCccccccCCchhHHHHHHHHHHhhcCceeecCCccCCCCCeEEECCCccccc
Q 012172 325 DGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVG 404 (469)
Q Consensus 325 ~g~~~iqle~~~~d~~~~~~~~~~v~v~r~eF~pVKn~~dL~~~~~~~~~l~~g~l~~~~~r~~~~~p~V~l~~~~~~~~ 404 (469)
++.+++|||++|||++++|+++.+++|+|+||+||||++||+++++++|.+++|++..++.|.....|.|.+++.|++++
T Consensus 325 d~~~~~klE~~~~D~~~~~~~~~~~~V~R~~F~PvKn~~dll~~~s~l~~~~~g~~~~~~~~~~~~~P~v~l~~~~~~v~ 404 (469)
T 2icy_A 325 DGVKVLQLETAAGAAIRFFDNAIGVNVPRSRFLPVKASSDLLLVQSDLYTLVDGFVTRNKARTNPSNPSIELGPEFKKVA 404 (469)
T ss_dssp TTEEEECCBCCGGGGGGGSTTCEEEECCGGGCCBCCSHHHHHHHHSTTEEEETTEEEECTTCCSSSCCEEEECGGGCSHH
T ss_pred CCCceEeehHhhHHHHHhcCCeEEEEechhHcCcCCCHHHHHHHHHHHHHHhcCcEEecCcccCCCCCeEEcChhhhhHH
Confidence 88889999999999999999999999999999999999999999999999999999999987667789999999999999
Q ss_pred ccccccccCCcccccCceEEEeeEEECCCcEEeeeEEEEecCCCceeeCCCCeeecceecCCCCC
Q 012172 405 NFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEINGPGDL 469 (469)
Q Consensus 405 ~~~~~i~~~p~~~~~~~l~v~G~v~fg~~V~i~g~~~I~~~~~~~~~I~~~s~le~~~v~~~~~~ 469 (469)
+|++||+++|||+++++|+|+|||+||+||+++|+|+|.|.+|++++||+|++|||++|.+||||
T Consensus 405 ~f~~rf~~~p~~~~~~~l~v~gdv~fg~~v~l~G~v~i~~~~~~~~~ip~g~~l~~~~~~~~~~~ 469 (469)
T 2icy_A 405 TFLSRFKSIPSIVELDSLKVSGDVWFGSSIVLKGKVTVAAKSGVKLEIPDRAVVENKNINGPEDL 469 (469)
T ss_dssp HHHHTBSSCCBCTTEEEEEEESEEEECSSCEEEEEEEEECCTTCEEEECTTCEEESCEECCC---
T ss_pred HHHHhcCCCcccccCCeEEEEeeeEEcCCcEEEEEEEEEcCCCCeeecCCCCEeecceeeccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999997
No 4
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-95 Score=770.68 Aligned_cols=460 Identities=55% Similarity=0.896 Sum_probs=423.4
Q ss_pred HHHHHHHHHHhh---hhcccChhHHHHHHHHHHHHhhcC--CCCccCCccccCCCCccccCCCCCCCCCChhhHHHhccc
Q 012172 5 AEKLTQLKSAVA---GLNQISENEKNGFINLVARYLSGE--AQHVEWSKIQTPTDKIVVPCDSLAPVPEDPAETKKLLDK 79 (469)
Q Consensus 5 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~l~k 79 (469)
+++|++|.++++ ..++.+..+++.|.++|++|+++. .+.++|++|+|++++.+.+|+++..+ +.|..++++
T Consensus 17 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~----~~~~~~~~k 92 (488)
T 2i5k_A 17 RNALNKLADSSKLDDAARAKFENELDSFFTLFRRYLVEKSSRTTLEWDKIKSPNPDEVVKYEIISQQ----PENVSNLSK 92 (488)
T ss_dssp HHHTTCCC--------CCSCTHHHHHHHHHHHHHHHHHHHSCCSCCGGGEECCCTTTEEEHHHHHSS----CCCSTTGGG
T ss_pred HHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcccccCCCcccccccCChhcccChhhcccc----hhhhhhcCC
Confidence 566666666654 233568899999999999999774 46999999999998888888776521 137788999
Q ss_pred eeEEEEcCCCCCcCCCCCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCCCCceEE
Q 012172 80 LVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHT 159 (469)
Q Consensus 80 ~avviLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~~~~i~~ 159 (469)
++||+||||+|||||++.||+|++|.+|||||||+++++++++.++|+.|||+||||++|++.|+++|++|...+.+|.|
T Consensus 93 ~avViLAGG~GTRmgs~~PK~l~~V~~gk~~Le~~i~~i~~l~~~~G~~Ip~vImts~~t~e~t~~~~~~~~~fg~~i~~ 172 (488)
T 2i5k_A 93 LAVLKLNGGLGTSMGCVGPKSVIEVREGNTFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKYSANRIRIRS 172 (488)
T ss_dssp EEEEEECCCBSGGGTCCSBSTTSCCBTTBCHHHHHHHHHHHHHHHHTCCCEEEEECCTTTHHHHHHHHGGGCSSSCEEEE
T ss_pred ceEEEEcCCCcccCCCCCCccccccCCCCcHHHHHHHHHHHhHHhcCCCccEEEEECCCCHHHHHHHHHhccccCceEEE
Confidence 99999999999999999999999997799999999999999999999999999999999999999999987654557999
Q ss_pred EEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCccccccccHHHHHHHHHc
Q 012172 160 FNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVDLKILNHLIQN 239 (469)
Q Consensus 160 f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DNL~~~~dp~~Lg~~~~~ 239 (469)
|.|+++||++.+|++++.++.++++++|+|+||||+|.+|..+|+|+.|.++|.+|++|+|+|||++..||.+||++.++
T Consensus 173 f~Q~~~P~i~~d~~~~l~~~~~~~~~~~~P~GtGga~~~L~~sg~l~~l~~~g~~~v~V~ngDnL~~~~d~~~L~~~~~~ 252 (488)
T 2i5k_A 173 FNQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGATVDLKILNHMIET 252 (488)
T ss_dssp ECCCCEECEETTTCCBSCSSSSSCTTSEECCCGGGHHHHHHHHTHHHHHHHTTCCEEEEECTTBSSCCCCHHHHHHHHHS
T ss_pred EEeCccceEccccceeeccCCCCCceeeecCCCchhhhhhhhcCcHHHHHhcCCCEEEEEeCCcCCCcccHHHHHHHHhc
Confidence 99999999999999999988766789999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceEEEeeeccCCCcceEEEEeCCeeEEEEeccCChhhhhhccccccccEEEEEeEEEeHHHHHHHHHhccccccccc
Q 012172 240 KNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIP 319 (469)
Q Consensus 240 ~~~~~~~v~~k~~~~~~~G~iv~~~g~~~ivEy~~~~~e~~~~~~~~~~~~~~Nt~~~~~~l~~L~~~l~~~~~~lp~~~ 319 (469)
+++++++++++++++++||+|++++|+++||||+|++++++++|++...++++|||+|||++++|++++++....||+|+
T Consensus 253 ~a~~t~~v~~~~~p~~~yG~Iv~~dG~~~iVE~~e~~~e~~~~~~~~~~~~~~Ntgi~~f~~~~L~~~l~~~~~~lp~~v 332 (488)
T 2i5k_A 253 GAEYIMELTDKTRADVKGGTLISYDGQVRLLEVAQVPKEHIDEFKNIRKFTNFNTNNLWINLKAVKRLIESSNLEMEIIP 332 (488)
T ss_dssp CCSEEEEEEECCGGGSSSCEEEEETTEEEEECGGGSCTTSHHHHTCTTTCCEEEEEEEEEEHHHHHHHHHTTCCCCCCBC
T ss_pred CCcEEEEEEEecCCCCceeEEEEECCcEEEEEeccCCHHHHhhcccccccCEEEEEEEEEeHHHHHHHHhhccCCCccee
Confidence 99999999999999999999999999999999999999998888888899999999999999999999998889999999
Q ss_pred CCCcCC----CcceehhHHHhhhHhhhcccceeEeecCccccccCCchhHHHHHHHHHHhhcCceeecCCccCCCCCeEE
Q 012172 320 NPKEVD----GIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLYTLADGFVTRNEARKNPANPTIE 395 (469)
Q Consensus 320 n~K~~~----g~~~iqle~~~~d~~~~~~~~~~v~v~r~eF~pVKn~~dL~~~~~~~~~l~~g~l~~~~~r~~~~~p~V~ 395 (469)
|+|+++ +.+++|||++|||++++|+++.+++|+|+||+||||+++|+++++++|.+++|++..++.++ ...|.|.
T Consensus 333 ~~K~i~~~~~~~~~~qlE~~~~d~~~~~~~~~~~~V~R~~F~PvKn~~~ll~~~~~~~~~~~g~~~~~~~~~-e~~P~v~ 411 (488)
T 2i5k_A 333 NQKTITRDGHEINVLQLETACGAAIRHFDGAHGVVVPRSRFLPVKTCSDLLLVKSDLFRLEHGSLKLDPSRF-GPNPLIK 411 (488)
T ss_dssp CEECCCC-----CEECCBCCGGGGGGGSSSCEEEEECGGGCCBCCSHHHHHHHTSTTEEEETTEEEECTTCC-SSCCEEE
T ss_pred cCccccCCCCCCceEEeeehhhhHHhhccCceEEEecccccccccCCccHHHHHHHHHHHhcCcEeecCCcC-CCCCeEE
Confidence 999997 67899999999999999999999999999999999999999999999999999999999884 5789999
Q ss_pred ECCCcccccccccccccCCcccccCceEEEeeEEECCCcEEeeeEEEEecCCCceeeCCCCeeecceecCCCCC
Q 012172 396 LGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEINGPGDL 469 (469)
Q Consensus 396 l~~~~~~~~~~~~~i~~~p~~~~~~~l~v~G~v~fg~~V~i~g~~~I~~~~~~~~~I~~~s~le~~~v~~~~~~ 469 (469)
+++.|+++++|++||+++|+|+++++|+|+|||+||+||+++|+|+|.|++|++++||+|++|||+.|.+||||
T Consensus 412 ~~~~~~~~~~~~~rf~~~p~i~~~~~l~v~Gdv~fg~~v~l~G~v~i~a~~~~~~~ip~g~~l~n~~~~~~~~~ 485 (488)
T 2i5k_A 412 LGSHFKKVSGFNARIPHIPKIVELDHLTITGNVFLGKDVTLRGTVIIVCSDGHKIDIPNGSILENVVVTGNLQI 485 (488)
T ss_dssp ECGGGSSHHHHHHHCSSCCBCTTEEEEEEESSEEECTTCEEEEEEEEECCTTCCEEECTTCEEEEEEEEEEEEE
T ss_pred ECCcccchhhHHhhcCCCccccccceEEEEeeeEEcCCcEEEEEEEEEcCCCCeEEeCCCCEEecceeeccccc
Confidence 98889999999999999999999999999999999999999999999999999999999999999999999986
No 5
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=100.00 E-value=8.6e-92 Score=742.83 Aligned_cols=448 Identities=35% Similarity=0.550 Sum_probs=410.6
Q ss_pred HHHHHHHhhhhcccChhHHHHHHHHHHHHhhcCCCCccCCccccCCCCccccCCCCCCCCCChhhHHHhccceeEEEEcC
Q 012172 8 LTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDKIVVPCDSLAPVPEDPAETKKLLDKLVVLKLNG 87 (469)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~l~k~avviLAG 87 (469)
+++..+.+ ......+.+++.|.++|++|++++++.++|+.|+|+ +.+.+|++++. +.|+++|++++||+|||
T Consensus 12 ~~~~~~~~-~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~i~p~--~~~~~~~~~~~-----~~g~~~l~k~avViLAG 83 (505)
T 2oeg_A 12 AQACVKKM-RDAKVNEACIRTFIAQHVMVSKGETGSIPDSAIMPV--DSLDALDSLTI-----ECDNAVLQSTVVLKLNG 83 (505)
T ss_dssp HHHHHHHH-HHTTCCHHHHHHHHHHHHHHHTTCCCCCCGGGCBCC--CCCCBGGGCCC-----CCCHHHHHTEEEEEEEC
T ss_pred HHHHHHHH-HHcCCChHHHHHHHHHHHHHHhcCCCCcChhhcCCh--hhccChhhcch-----hHHHHHHhcceEEEEcC
Confidence 44444444 345588999999999999999887789999999998 66777877752 37899999999999999
Q ss_pred CCCCcCCCCCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHH-H--hcC-CCCceEEEEec
Q 012172 88 GLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIE-K--YSK-SNVEIHTFNQS 163 (469)
Q Consensus 88 G~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~-~--~~g-~~~~i~~f~Q~ 163 (469)
|+|||||++.||+|+||.+|+||||++++++++++.+||+.|||+||||++|++.|++||+ + ++| .+.+|.+|.|+
T Consensus 84 GlGTRLg~~~PK~llpV~~gk~fLe~~ie~l~~~~~~~g~~ip~viMtS~~t~e~t~~~f~~~~~~fGl~~~~I~~f~Q~ 163 (505)
T 2oeg_A 84 GLGTGMGLCDAKTLLEVKDGKTFLDFTALQVQYLRQHCSEHLRFMLMDSFNTSASTKSFLKARYPWLYQVFDSEVELMQN 163 (505)
T ss_dssp CCCGGGTCCSCGGGSEEETTEEHHHHHHHHHHHHHHHTCTTCEEEEEECHHHHHHHHHHHHHHCHHHHTTCCCCCEEECC
T ss_pred CcccccCCCCCCcccccCCCCcHHHHHHHHHHHHHHhcCCCcCEEEEeCCCCHHHHHHHHhhhhhccCCCccceEEEEEc
Confidence 9999999999999999956999999999999999999999999999999999999999999 6 445 45689999999
Q ss_pred CcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCccccccccHHHHHHHHHcCCcc
Q 012172 164 QYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVDLKILNHLIQNKNEY 243 (469)
Q Consensus 164 ~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DNL~~~~dp~~Lg~~~~~~~~~ 243 (469)
++|+++.+|..++.++.+ +.++|+|+||||+|.+|+++|+|++|+++|++|++|+|+|||++.+||.+|||+.++++++
T Consensus 164 ~~P~~~~~~~~~i~~~~~-~~~e~~P~G~Gg~~~aL~~sGlL~~l~~~G~e~i~V~N~DNL~~~~D~~llg~~~~~~ad~ 242 (505)
T 2oeg_A 164 QVPKILQDTLEPAAWAEN-PAYEWAPPGHGDIYTALYGSGKLQELVEQGYRYMFVSNGDNLGATIDKRVLAYMEKEKIDF 242 (505)
T ss_dssp CEECEETTTCCBCCCTTC-GGGGEECCCTTHHHHHHHHTTHHHHHHHTTCCEEEEECTTCTTCCCCHHHHHHHHHHTCSE
T ss_pred CEEeEecCCCceeecCCC-CccccCcCCchHHHHHHHhcChHHHHHhcCCCEEEEEECCccccccCHHHHHHHHhcCCcE
Confidence 999999999776644433 4599999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeeeccCCCcceEEEE-------eCCe-------eEEEEeccCChhhhhhccccccccEEEEEeEEEeHHHHHHHHH
Q 012172 244 CMEVTPKTLADVKGGTLIS-------YEGK-------VQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVE 309 (469)
Q Consensus 244 ~~~v~~k~~~~~~~G~iv~-------~~g~-------~~ivEy~~~~~e~~~~~~~~~~~~~~Nt~~~~~~l~~L~~~l~ 309 (469)
+++|++|+.++++||+++. ++|+ ++++||+|+|+++++++++...|++|||||+||++++|+++++
T Consensus 243 ~~~v~~k~~~d~~~Gvl~~~~~~~~~~dg~~nvEyn~~~llEyse~p~e~~~~~~g~~~f~~~Ninn~~~~l~~l~~~~~ 322 (505)
T 2oeg_A 243 LMEVCRRTESDKKGGHLARQTVYVKGKDGQPDAEKRVLLLRESAQCPKADMESFQDINKYSFFNTNNLWIRLPVLLETMQ 322 (505)
T ss_dssp EEEEEECCTTCCSSEEEEEEEEEECCSSSCCCEEEEEEEEEEGGGSCGGGHHHHHCTTTTCEEEEEEEEEEHHHHHHHHH
T ss_pred EEEEEEecCCccceeEEEEecccccccCCccccccCceeEEEeccCChhhhhcccCccccCeeEEEEEEEEHHHHHHHHh
Confidence 9999999999999999998 7899 9999999999999999988999999999999999999999999
Q ss_pred h--cccccccccCCCcCC-----CcceehhHHHhhhHhhhcccceeEeecCccccccCCchhHHHHHHHHHHhhc-Ccee
Q 012172 310 A--DALKMEIIPNPKEVD-----GIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLYTLAD-GFVT 381 (469)
Q Consensus 310 ~--~~~~lp~~~n~K~~~-----g~~~iqle~~~~d~~~~~~~~~~v~v~r~eF~pVKn~~dL~~~~~~~~~l~~-g~l~ 381 (469)
+ ..+.||+|+|.|+++ +++++|||++|||++++|+++.+++|+|+||+||||++|++++|+|+|.+++ +.+.
T Consensus 323 ~~~~~~~Lp~~vn~K~i~~~d~~~~~~~qlE~~~~d~~~~~~~~~~~~V~R~~FsPvKn~~dl~~~~sdly~~~~~~~~~ 402 (505)
T 2oeg_A 323 EHGGTLPLPVIRNEKTVDSSNSASPKVYQLETAMGAAIAMFESASAIVVPRSRFAPVKTCADLLALRSDAYVVTDDFRLV 402 (505)
T ss_dssp HTTSSCCCCCEEEEEESSSSCTTSCEEEEEECCGGGGGGSCTTCEEEECCGGGCCCCSSHHHHHHHHSTTEEECTTCCEE
T ss_pred hhcCccCCcceecccccCCCCCCCCCeEEEeEHHHHHHHhcCcceEEEeccceeecccCCCCHHHHHHHHHhhcCCceEE
Confidence 7 457899999999997 5679999999999999999999999999999999999999999999999998 6666
Q ss_pred ecCCccCCCCCeEEECCC-ccccccccccccc-CCcccccCceEEEeeEEECCCcEEeeeEEEEec-CCCceeeCCCCee
Q 012172 382 RNEARKNPANPTIELGPE-FKKVGNFLSRFKS-IPSIIELDSLKVTGDVWFGANITLKGKVTIAAK-SGEKLEIPDGAVL 458 (469)
Q Consensus 382 ~~~~r~~~~~p~V~l~~~-~~~~~~~~~~i~~-~p~~~~~~~l~v~G~v~fg~~V~i~g~~~I~~~-~~~~~~I~~~s~l 458 (469)
.+|.|+. ..|.|+|+|. |.++++|++||++ +|||+++++|+|+|+|+||+||+++|+|+|.++ +|++++||+|++|
T Consensus 403 ~~~~~~~-~~p~i~l~p~~~~~~~~~~~r~~~g~psi~~~~~L~v~G~~~f~~~v~l~G~v~i~a~~~~~~~~ip~g~~l 481 (505)
T 2oeg_A 403 LDDRCHG-HPPVVDLDSAHYKMMNGFEKLVQHGVPSLVECKRVTVKGLVQFGAGNVLTGTVTIENTDSASAFVIPDGAKL 481 (505)
T ss_dssp ECGGGTT-CCCEEEECHHHHSSHHHHHHHSTTCCCBCTTEEEEEEESSEECCTTCEEEEEEEEECCSCSSCEECCTTCEE
T ss_pred EcccccC-cCCeEEEChhHcCcHHHHHHhcCCCCCccccCcEEEEEcceEEccCcEEEEEEEEEecCCCCcEEeCCCCEE
Confidence 6888763 6789999999 6699999999988 999999999999999999999999999999998 9999999999999
Q ss_pred ecceecC
Q 012172 459 ENKEING 465 (469)
Q Consensus 459 e~~~v~~ 465 (469)
||+.|..
T Consensus 482 ~n~~~~~ 488 (505)
T 2oeg_A 482 NDTTASP 488 (505)
T ss_dssp ESCEECC
T ss_pred eCceech
Confidence 9998864
No 6
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=100.00 E-value=3.9e-80 Score=659.02 Aligned_cols=444 Identities=19% Similarity=0.218 Sum_probs=379.2
Q ss_pred HHHHHHHHHHhhhhcccChhHHHHHHHHHHHHhhcCCCCccCCccccCCCCc---cccCCCCCCCCCChhhHHHhcccee
Q 012172 5 AEKLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDKI---VVPCDSLAPVPEDPAETKKLLDKLV 81 (469)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~---~~~~~~~~~~~~~~~~g~~~l~k~a 81 (469)
.++.++|+++|..++..+++++..|++.+++++....+..+++.++|+|... .++.++ ++...+++.|+++|+|+|
T Consensus 38 ~~e~~~L~~qL~~~d~~~~~gl~~~~~~a~~~l~~~~~~~~~~~~~p~P~~~~~~~l~~~~-~~~~~~~~~Gl~~i~kva 116 (630)
T 3ogz_A 38 NERQIALLTDLYMFSNMYPGGVAQYIRNGHELLARESEEVDFAALEMPPLIFEAPSLHRRT-AERTALENAGTAMLCKTV 116 (630)
T ss_dssp CHHHHHHHHHHHHGGGTSTTHHHHHHHHHHHHHHHHTSCCCCSEEECCSCEEECCCTTCCC-HHHHHHHHHHHHHGGGEE
T ss_pred HHHHHHHHHHHHhhChhhhhhHHHHHHHHHHHhhccccCCcccccccCCCCCccccccCCH-HHHHHHHHHhHHHHhhce
Confidence 4567799999999998999999999999999995545677889999766421 122111 112235567999999999
Q ss_pred EEEEcCCCCCcCCCCCCcccccc--CCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcC-CCCceE
Q 012172 82 VLKLNGGLGTTMGCTGPKSVIEV--RNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSK-SNVEIH 158 (469)
Q Consensus 82 vviLAGG~GTRmg~~~PK~l~~v--~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g-~~~~i~ 158 (469)
||+||||||||||++.||+++|+ ++|+||||+++++++ +.+|+.|||+||||+.||++|++||++ +| .+.+|+
T Consensus 117 vvllaGGlGTRLG~~~pK~~lpv~~~s~ks~lql~~e~i~---~~~g~~iPl~IMTS~~T~~~T~~~~~~-fgl~~~~V~ 192 (630)
T 3ogz_A 117 FVLVAGGLGERLGYSSIKVSLPVETATNTTYLAYYLRWAQ---RVGGKEVPFVIMTSDDTHDRTLQLLRE-LQLEVPNLH 192 (630)
T ss_dssp EEEECCCEEGGGTEEEEGGGSBSCTTTCCBHHHHHHHHHH---HHHCTTCCEEEEECTTTHHHHHHHHHH-TTCCCTTEE
T ss_pred EEEecCCcccccCCCCCcccceecCCCCCcHHHHHHHHHH---HHhCCCCcEEEEecccchHHHHHHHHH-hCCCcccEE
Confidence 99999999999999999999998 479999999999999 457899999999999999999999999 55 567899
Q ss_pred EEEecCcceec-CCCCcccCCCCCCCCcccccCCCcccchhccccc------------------hHHHHHHcCCcEEEEE
Q 012172 159 TFNQSQYPRLC-ADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSG------------------KLDALISQGKEYVFAA 219 (469)
Q Consensus 159 ~f~Q~~~P~l~-~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg------------------~L~~l~~~G~~~v~v~ 219 (469)
+|+|+++||++ .+|++++..+ ++++|+|+||||+|.+|+++| +|++|+++|++|+||+
T Consensus 193 ~F~Q~~~P~i~~~~g~l~l~~~---~~i~~~P~GhGdv~~aL~~sG~~~~~~~~~~~~~~~~~~lLd~l~~~Gieyi~v~ 269 (630)
T 3ogz_A 193 VLKQGQVFCFADSAAHLALDET---GKLLRKPHGHGDVHSLIYNATVKRDVVPDSGDGTATAQPLVNDWLAAGYESIVFI 269 (630)
T ss_dssp EEECCCEECBSSTTCCBCBCTT---SSBCEECCCTTHHHHHHHHCBC--------------CCBHHHHHHHTTCCEEEEE
T ss_pred EEEcCCEEEEecCCCceeecCC---CcccCCCCCCHHHHHHHHHcCCCcccccccccccccHHHHHHHHHHcCCEEEEEE
Confidence 99999999996 6788888865 699999999999999999999 9999999999999999
Q ss_pred eCcc-ccccccHHHHHHHHHcCCcceEEEeeeccCCCcceEEEEe---CCee---EEEEeccCChhhhhh-------ccc
Q 012172 220 NSDN-LGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISY---EGKV---QLLEIAQVPDEHVNE-------FKS 285 (469)
Q Consensus 220 n~DN-L~~~~dp~~Lg~~~~~~~~~~~~v~~k~~~~~~~G~iv~~---~g~~---~ivEy~~~~~e~~~~-------~~~ 285 (469)
|+|| |++++||.||||+++++++++++|++|+ +.+++|++|+. +|++ ++|||+|++++.++. +.+
T Consensus 270 ~vDN~L~~~~DP~~lG~~~~~~~d~~~kvv~r~-p~E~vG~l~~~~~~dGk~~~v~vVEYsei~~~~~~~~~~~g~~~~~ 348 (630)
T 3ogz_A 270 QDTNAGATITIPISLALSAEHSLDMNFTCIPRV-PKEPIGLLCRTKKNSGDPWLVANVEYNVFAEVSRALNKDGGDEVSD 348 (630)
T ss_dssp CTTBTTHHHHHHHHHHHHHHTTCSEEEEEECCC-SSCSSCEEEEEESSTTSCCEEEEECHHHHHHHHHHC----------
T ss_pred ccCCccccccCHHHhHHHHhcCCCEEEEEEECC-CCcceeeEEEEecCCCceeeeeEEEeccCCHhHhhccCCCcccccc
Confidence 9999 9999999999999999999999999985 67778888884 8998 569999999886652 444
Q ss_pred cccccEE--EEEeEEEeHHHHHHHHHhcccccccccCCCcCCC-----cceehhHHHhhhHhhhcc-c---ceeEeecCc
Q 012172 286 IEKFKIF--NTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDG-----IKVLQLETAAGAAIRFFD-H---AIGCNVHRS 354 (469)
Q Consensus 286 ~~~~~~~--Nt~~~~~~l~~L~~~l~~~~~~lp~~~n~K~~~g-----~~~iqle~~~~d~~~~~~-~---~~~v~v~r~ 354 (469)
..+|++| ||||+||+++++.+.+.+....+|+|+|+|++++ ++++|||++|||++..|+ + +.+++|+|+
T Consensus 349 ~~~~~~f~GNtNnl~~~L~a~~~~l~~~~~~ip~~vNpK~~d~~~~~~~~~~qLEt~m~d~~~~F~~~~~~v~~~~V~R~ 428 (630)
T 3ogz_A 349 PTGFSPFPGSVNTLVFKLSSYVDRLRESHGIVPEFINPKYSDETRRSFKKPARIESLMQDIALLFSEDDYRVGGTVFERF 428 (630)
T ss_dssp --CCCSSCEEEEEEEEEHHHHHHHHHHHTTCCCCEECCCBSSSSSCCBSSCBCEECCGGGGGGGCCTTTCCEEEEECCGG
T ss_pred ccccccccccceeeeEEHHHHHHHHHhccCccceecCCcccCCcccccCcchhhhhHHHHHHHhccccCcceeEEEECCC
Confidence 5668888 9999999999999999887789999999999973 248999999999999997 4 477899999
Q ss_pred cccccCCchh--------------HHHHHHHHHHhhcCceeecCCccC----------------CCCCeEEECCCcc-c-
Q 012172 355 RFLPVKATSD--------------LLLVQSDLYTLADGFVTRNEARKN----------------PANPTIELGPEFK-K- 402 (469)
Q Consensus 355 eF~pVKn~~d--------------L~~~~~~~~~l~~g~l~~~~~r~~----------------~~~p~V~l~~~~~-~- 402 (469)
||+||||+.+ ..++|+++|.+++.|+..++.++. ...|.|.|+|.|+ +
T Consensus 429 ~F~PVKn~~~~a~~k~~~g~~~~sp~t~~~dly~~~~~~L~~aG~~v~~~~~~~~~~~~~~~~~~~~P~i~l~p~~~~~~ 508 (630)
T 3ogz_A 429 SYQPVKNSLEEAAGLVAQGNGAYCAATGEAAFYELQRRRLKAIGLPLFYSSQPEVTVAKDAFGVRLFPIIVLDTVCASSG 508 (630)
T ss_dssp GCCBCCBCHHHHHHHHHTTCCCCBHHHHHHHHHHHHHHHHHHTTCCCCCCCSCSEEETTTTEEECCCSEEEECHHHHTTC
T ss_pred eeecccCChhHhhhhhccCCCcCChHHHHHHHHHHHHHHHHHcCceecccccchhhhhcCccccCCCCEEEEeccccccc
Confidence 9999999984 578899999888777766555432 3468999999997 5
Q ss_pred -cccccccccc--CCcccccCceEEEeeEEECCCcEEeeeEEEEecCCCc----eeeCCCCeeec
Q 012172 403 -VGNFLSRFKS--IPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEK----LEIPDGAVLEN 460 (469)
Q Consensus 403 -~~~~~~~i~~--~p~~~~~~~l~v~G~v~fg~~V~i~g~~~I~~~~~~~----~~I~~~s~le~ 460 (469)
++++.+||++ .++|...+.|+|+|+|+| +||.|+|.++|++..|+. ++|.. ++.|
T Consensus 509 ~~~~~~~k~~~~~~~~i~~~S~L~veg~v~~-~~l~LdG~lvI~a~~~~~~~~~v~~~~--~v~n 570 (630)
T 3ogz_A 509 SLDDLARVFPTPEKVHIDQHSTLIVEGRVII-ESLELYGALTIRGPTDSMALPHVVRNA--VVRN 570 (630)
T ss_dssp CHHHHHHHCSSGGGEEECTTCEEEEESSEEE-SCEEEESEEEEECCSSTTSCCEEECSE--EEEC
T ss_pred cHHHHHHHhCCCCCceecCCcEEEEEEEEEE-EEEEEeeEEEEEcCCCCccCceEEecc--eEec
Confidence 7999999988 889999999999999666 999999999999999888 76665 4444
No 7
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=100.00 E-value=1.4e-72 Score=579.95 Aligned_cols=326 Identities=19% Similarity=0.272 Sum_probs=294.8
Q ss_pred CChhhHHHhc--cceeEEEEcCCCCCcCCCCCCcccccc--CCCCchHHHHHHHHHHhhh---hc----CCcccEEEecC
Q 012172 68 EDPAETKKLL--DKLVVLKLNGGLGTTMGCTGPKSVIEV--RNGLTFLDLIVIQIENLNA---KY----GCNVPLLLMNS 136 (469)
Q Consensus 68 ~~~~~g~~~l--~k~avviLAGG~GTRmg~~~PK~l~~v--~~gks~L~~~~~~i~~l~~---~~----~~~iplviMtS 136 (469)
++++.|+++| +|+|||+||||+|||||++.||+|++| ++||||||++++++++++. ++ ++.|||+||||
T Consensus 22 ~~~~~Gl~~i~~gkvavvlLAGG~GTRLG~~~PK~~~~Vgl~~gks~lq~~~e~i~~lq~l~~~~~~~~~~~Ip~~IMtS 101 (405)
T 3oc9_A 22 EHYYRGLELISQGKTALITPAGGQGSRLGFEHPKGMFVLPFEIPKSIFQMTSERLLRLQELASEYSHQKNVMIHWFLMTN 101 (405)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCSBCTTTTCCSBGGGCEECSSSCEEHHHHHHHHHHHHHHHHHHHHCCSCCCCEEEEEEC
T ss_pred HHHHHHHHHHhcCceEEEEecCCCcccccCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhhhccccCCCCCEEEEeC
Confidence 4567899999 599999999999999999999999998 8999999999999987654 33 68899999999
Q ss_pred CCChHHHHHHHHHhc--C-CCCceEEEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCC
Q 012172 137 FNTHDDTSKIIEKYS--K-SNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGK 213 (469)
Q Consensus 137 ~~t~e~t~~~~~~~~--g-~~~~i~~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~ 213 (469)
++|++.|++||++|. | .+.+|.+|.|+++||++.+|+++++++ ++++|+|+||||+|.+|..+|+|++|.++|+
T Consensus 102 ~~t~e~t~~~f~~~~~fGl~~~~i~~f~Q~~~P~i~~dg~i~l~~~---~~i~~~P~GhGgi~~aL~~sG~Ld~l~~~Gi 178 (405)
T 3oc9_A 102 EETIEEINNYFKEHQYFGLSSEQIHCFPQGMLPVVDFNGKILYEKK---DKPYMAPNGHGGLFKALKDNGILEFMNEKGI 178 (405)
T ss_dssp TTTHHHHHHHHHHTGGGGSCTTSEEEEECCEEECBCTTSCBCEEET---TEECEEECCGGGHHHHHHHTTHHHHHHHHTC
T ss_pred CccHHHHHHHHHhCcccCCCccceEEEeeCceeEEecCCCeecCCC---CccccccCCChHHHHHHHHCCcHHHHHhcCC
Confidence 999999999999854 6 456899999999999999999999865 8999999999999999999999999999999
Q ss_pred cEEEEEeCcc-ccccccHHHHHHHHHcCCcceEEEeeeccCCCcceEEEEeCCeeEEEEeccCChhhhhhccc---cccc
Q 012172 214 EYVFAANSDN-LGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKS---IEKF 289 (469)
Q Consensus 214 ~~v~v~n~DN-L~~~~dp~~Lg~~~~~~~~~~~~v~~k~~~~~~~G~iv~~~g~~~ivEy~~~~~e~~~~~~~---~~~~ 289 (469)
+|++|+|+|| |++++||.||||+++++++++++|++|+.+++++|++|++||+++||||+|+|++ .++++ ...|
T Consensus 179 eyi~v~nvDN~L~~~~Dp~~lg~~~~~~~d~~~kvv~k~~~dek~Gvl~~~dg~~~vvEysei~~e--~e~~~~~g~l~f 256 (405)
T 3oc9_A 179 KYSVAHNVDNILCKDVDPNMIGYMDLLQSEICIKIVKKGFKEEKVGVLVKEQERIKVVEYTELTDE--LNKQLSNGEFIY 256 (405)
T ss_dssp CEEEEECTTBTTCCSSCHHHHHHHHHTTCSEEEEEEECCSTTCSCCEEEEETTEEEEECGGGCCTT--TTCBCTTSCBSS
T ss_pred EEEEEEeCCCcccccCCHHHHHHHHHcCCCEEEEEEECCCCCCccceEEEECCeeEEEEEeeCCHH--HhhcCCCCceee
Confidence 9999999999 9999999999999999999999999999999999999999999999999999998 44443 3455
Q ss_pred cEEEEEeEEEeHHHHHHHHHhcccccccccCCCcCC-----C-------cceehhHHHhhhHhhhcccceeEeecCc-cc
Q 012172 290 KIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVD-----G-------IKVLQLETAAGAAIRFFDHAIGCNVHRS-RF 356 (469)
Q Consensus 290 ~~~Nt~~~~~~l~~L~~~l~~~~~~lp~~~n~K~~~-----g-------~~~iqle~~~~d~~~~~~~~~~v~v~r~-eF 356 (469)
...|+++|+|++++|++++ ...||+|+|.|+++ | ++++|||+|+||+|++++++.+++|+|+ ||
T Consensus 257 n~~Ni~~h~fs~~fL~~i~---~~~l~~h~a~Kkip~~d~~g~~~~p~~~ngiklE~fifd~f~~~~~~~~~eV~R~~eF 333 (405)
T 3oc9_A 257 NCGHISINGYSTSFLEKAA---EYQLPYHIAKKKVPFVNEQGIVIHPSENNGIKKEIFFFDVFPLATKVSIFEIQRFIEF 333 (405)
T ss_dssp CEEEEEEEEEEHHHHHHHT---TCCCCCEEEEECCCEECTTSCEECCSSCCEEEEECCGGGGGGGCSCEEEEECCHHHHC
T ss_pred ccceeEeeecCHHHHHHhh---hccCCcEEeccccCccCCCCCCcccCCcceeehHHHHHHHHHhccceEEEEEChHhcc
Confidence 6667777778999999998 45799999999985 2 4699999999999999999999999998 99
Q ss_pred cccCCc-----hhHHHHHHHHHHhhcCceeecCCccCCCC-CeEEECCCcc
Q 012172 357 LPVKAT-----SDLLLVQSDLYTLADGFVTRNEARKNPAN-PTIELGPEFK 401 (469)
Q Consensus 357 ~pVKn~-----~dL~~~~~~~~~l~~g~l~~~~~r~~~~~-p~V~l~~~~~ 401 (469)
+||||+ +++.+||++++.+++.|++.++..+.+.. ..|+++|.++
T Consensus 334 ~PlKn~~g~~~dsp~tar~~l~~~~~~wl~~ag~~~~~~~~~~~Eispl~s 384 (405)
T 3oc9_A 334 SALKNSLNESFDNVNTVKRDWYRLNIYYLKKAGAIVDDSKSPICEISFRKS 384 (405)
T ss_dssp CBCCCCTTSSSSSHHHHHHHHHHHHHHHHHHTTCEEECSSCCCEEECTTTC
T ss_pred cceecCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEcCCCCccEEeCcccc
Confidence 999998 56999999999999999999998875443 3699999865
No 8
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=100.00 E-value=1.8e-69 Score=573.08 Aligned_cols=387 Identities=17% Similarity=0.201 Sum_probs=326.5
Q ss_pred HHHHHHHHHHhhhhcccChhHHHHHHHHHHHHhhcCCCCccCC-ccccCCCCccccCCCCCC--CCCChhhHHHhc--cc
Q 012172 5 AEKLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQHVEWS-KIQTPTDKIVVPCDSLAP--VPEDPAETKKLL--DK 79 (469)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~--~~~~~~~g~~~l--~k 79 (469)
.++.++|+++|..+. +...+.++|++....++ ..+++ .++|++++.+.++.++.. ...+++.|+++| +|
T Consensus 30 ~~ek~~l~~ql~~~~-----d~~~l~~~~~~~~~~~~-~~~~~~~i~p~p~~~~~~~~~~~~~~~~~~~~~G~~~i~~gk 103 (486)
T 2yqc_A 30 IDQQQEFIDQLSTIE-----EPAKLISTVEQAIQFSQ-TNSTSRNFTQLPNEQTASTLDLSKDILQNWTELGLKAIGNGE 103 (486)
T ss_dssp HHHHHHHHHHHHTSS-----SHHHHHHHHHHHHHHTC-----CCCEECCCGGGEEETTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCc-----CHHHHHHHHHHHHhccc-cccccccccCCChhhccccccCChHHHHHHHHHHHHHHhhCC
Confidence 455567777775430 22345555555554432 12233 499988877766665531 112446799999 48
Q ss_pred eeEEEEcCCCCCcCCCCCCccccccC--CCCchHHHHHHHHHHhhhhc----C----CcccEEEecCCCChHHHHHHHHH
Q 012172 80 LVVLKLNGGLGTTMGCTGPKSVIEVR--NGLTFLDLIVIQIENLNAKY----G----CNVPLLLMNSFNTHDDTSKIIEK 149 (469)
Q Consensus 80 ~avviLAGG~GTRmg~~~PK~l~~v~--~gks~L~~~~~~i~~l~~~~----~----~~iplviMtS~~t~e~t~~~~~~ 149 (469)
++||+||||+|||||++.||+|++|. +|+||||++++++++++..+ | +.||||||||++|++.|++||++
T Consensus 104 vavvlLaGG~GTRLg~~~PK~l~~v~l~~gk~~l~~~~e~l~~~~~~~~~~~G~~~~~~ip~~ImtS~~t~~~t~~~~~~ 183 (486)
T 2yqc_A 104 VAVLLMAGGQGTRLGSSAPKGCFNIELPSQKSLFQIQAEKILKIEQLAQQYLKSTKKPIINWYIMTSGPTRNATESFFIE 183 (486)
T ss_dssp EEEEEEEESBCGGGTCSSBGGGCBCCCTTCCBHHHHHHHHHHHHHHHHHHHHTCSSCCCCEEEEEECGGGHHHHHHHHHH
T ss_pred eEEEEEcCCccccCCCCCCCccceecCCCCCcHHHHHHHHHHHHHHHhhhhcCCCcCCccCEEEEECCCCHHHHHHHHhh
Confidence 99999999999999999999999983 69999999999999998665 6 78999999999999999999998
Q ss_pred h--cC-CCCceEEEEecCcceecCCC-CcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCcc-c
Q 012172 150 Y--SK-SNVEIHTFNQSQYPRLCADD-FVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDN-L 224 (469)
Q Consensus 150 ~--~g-~~~~i~~f~Q~~~P~l~~~~-~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DN-L 224 (469)
| +| ...+|++|+|+++||++.+| +++++++ ++++|+|+||||+|.+|.++|+|++|.++|++|++|+|+|| |
T Consensus 184 ~~~fgl~~~~v~~f~Q~~~P~i~~dg~~i~l~~~---~~i~~~P~G~Ggi~~aL~~sG~Ld~l~~~G~~yi~v~~vDN~l 260 (486)
T 2yqc_A 184 NNYFGLNSHQVIFFNQGTLPCFNLQGNKILLELK---NSICQSPDGNGGLYKALKDNGILDDLNSKGIKHIHMYCVDNCL 260 (486)
T ss_dssp TGGGGSCGGGEEEEECCEEECBCTTSSSBCEEET---TEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEEETTBTT
T ss_pred ccccCCCcceEEEEecccceeEcCCCCccccCCC---CccccCcCCchHHHHHHHHcCcHHHHHhcCCeEEEEECCCCce
Confidence 4 46 45689999999999999999 8998875 88999999999999999999999999999999999999999 7
Q ss_pred cccccHHHHHHHHHcCCcceEEEeeeccCCCcceEEEEe--CCeeEEEEeccCChhhhhhcc----ccccccEEEEEeEE
Q 012172 225 GAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISY--EGKVQLLEIAQVPDEHVNEFK----SIEKFKIFNTNNLW 298 (469)
Q Consensus 225 ~~~~dp~~Lg~~~~~~~~~~~~v~~k~~~~~~~G~iv~~--~g~~~ivEy~~~~~e~~~~~~----~~~~~~~~Nt~~~~ 298 (469)
+..+||.+|||+++++++++++|++|+.+++++|++|++ +|+++|+||+|+|++.++.+. +...+..+|||+||
T Consensus 261 ~~~~Dp~~lg~~~~~~~~~~~~vv~k~~~~e~~Gvl~~~~~dg~~~vvEy~E~~~~~~~~~~~~~~~~~~~~~~Ni~~~~ 340 (486)
T 2yqc_A 261 VKVADPIFIGFAIAKKFDLATKVVRKRDANESVGLIVLDQDNQKPCVIEYSEISQELANKKDPQDSSKLFLRAANIVNHY 340 (486)
T ss_dssp CCTTCHHHHHHHHHHTCSEEEEEEECCSTTCCCCEEEEETTTTEEEEECGGGSCHHHHHCEETTEEEEESSCEEEEEEEE
T ss_pred eeccCHHHHHHHHHcCCCEEEEEEEcCCCCCceeEEEEEecCCCEEEEEEecCCHHHhhcccccccccccccceeEEEEE
Confidence 779999999999999999999999999999999999998 999999999999998877652 33578899999999
Q ss_pred EeHHHHHHHHHhcccc---cccccCCCcCC-------------CcceehhHHHhhhHhhhcc--cceeEeecC-cccccc
Q 012172 299 VNLKAIKRLVEADALK---MEIIPNPKEVD-------------GIKVLQLETAAGAAIRFFD--HAIGCNVHR-SRFLPV 359 (469)
Q Consensus 299 ~~l~~L~~~l~~~~~~---lp~~~n~K~~~-------------g~~~iqle~~~~d~~~~~~--~~~~v~v~r-~eF~pV 359 (469)
|++++|++++.+.... ||+|+|+|+++ .++++|||++|||+|++++ ++.+++|+| +||+||
T Consensus 341 ~~l~~L~~~l~~~~~~~~~lp~~v~~Kki~~~d~~~g~~~~p~~pn~~klE~~~~d~~~~~~l~~~~~~~V~R~~~FsPv 420 (486)
T 2yqc_A 341 YSVEFLNKMIPKWISSQKYLPFHIAKKKIPSLNLENGEFYKPTEPNGIKLEQFIFDVFPSVELNKFGCLEVDRLDEFSPL 420 (486)
T ss_dssp EEHHHHHHHHHHHTTCTTTSCCEEEEECCCEECTTTCCEECCSSCCEEEEECCGGGGGGGSCGGGEEEEEECHHHHCCBC
T ss_pred EeHHHHHHHHHhhcCcccCCcceEeccccCccccccCeeccCCCCCeeeeeehHhhHHhhcccCceEEEEECcccceeee
Confidence 9999999978776666 99999999763 2358999999999999999 999999999 599999
Q ss_pred CCch-----hHHHHHHHHHHhhcCceeecCCccCCCCCeEEECCCcc
Q 012172 360 KATS-----DLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFK 401 (469)
Q Consensus 360 Kn~~-----dL~~~~~~~~~l~~g~l~~~~~r~~~~~p~V~l~~~~~ 401 (469)
||+. ...+|+++++.+++.|+..+|..+.+ ...|+++|.+.
T Consensus 421 Kn~~~~~~dsp~ta~~~l~~~~~~~l~~aG~~~~~-~~~~eisp~~s 466 (486)
T 2yqc_A 421 KNADGAKNDTPTTCRNHYLERSSKWVIQNGGVIDN-QGLVEVDSKTS 466 (486)
T ss_dssp CSCTTSSSSSHHHHHHHHHHHHHHHHHHTTCEECT-TCCCBCCTTTC
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCeecC-CCcEEEcceee
Confidence 9974 38999999999999999999987643 23578888754
No 9
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=100.00 E-value=7e-68 Score=562.77 Aligned_cols=374 Identities=18% Similarity=0.253 Sum_probs=321.5
Q ss_pred HHHHHHHHHHhhhhcccChhHHHHHHHHHHHHhhcCC----CCccCCccccCCCCccccCCCCC-CCCCChhhHHHhc--
Q 012172 5 AEKLTQLKSAVAGLNQISENEKNGFINLVARYLSGEA----QHVEWSKIQTPTDKIVVPCDSLA-PVPEDPAETKKLL-- 77 (469)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~g~~~l-- 77 (469)
.++.++|+++|..+ +...|.++|+++++... +...++.|+|++++.+.+|.+-+ ....+++.|++++
T Consensus 27 ~~ek~~l~~ql~~~------d~~~~~~~~~~~~~~~~~s~~~~~~~~~i~p~p~~~~~~~~~~~~~~~~~~~~Gl~~i~~ 100 (505)
T 1jv1_A 27 EAQQVELYAELQAM------NFEELNFFFQKAIEGFNQSSHQKNVDARMEPVPREVLGSATRDQDQLQAWESEGLFQISQ 100 (505)
T ss_dssp HHHHHHHHHHHHTC------CHHHHHHHHHHHHHCC-----------CCBCCCGGGEEETTTTGGGHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh------CHHHHHHHHHHHHHhhhhccccCcccccccCCChHhcccccCChHHHHHHHHHhHHhhcc
Confidence 45566778777543 34468888888886421 11224779999888777775511 1112445799987
Q ss_pred cceeEEEEcCCCCCcCCCCCCcccccc--CCCCchHHHHHHHHHHhh----hhcC--CcccEEEecCCCChHHHHHHHHH
Q 012172 78 DKLVVLKLNGGLGTTMGCTGPKSVIEV--RNGLTFLDLIVIQIENLN----AKYG--CNVPLLLMNSFNTHDDTSKIIEK 149 (469)
Q Consensus 78 ~k~avviLAGG~GTRmg~~~PK~l~~v--~~gks~L~~~~~~i~~l~----~~~~--~~iplviMtS~~t~e~t~~~~~~ 149 (469)
+|+++|+||||+|||||++.||+|+|| ++|+||||++++++++++ +++| +.+||+||||++|++.|++||++
T Consensus 101 ~kvavViLAGG~GTRLg~~~PK~l~pv~~~~gk~~le~~~e~l~~lq~la~~~~G~~~~ip~vImtS~~t~e~t~~~f~~ 180 (505)
T 1jv1_A 101 NKVAVLLLAGGQGTRLGVAYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSGRTMESTKEFFTK 180 (505)
T ss_dssp TCEEEEEECCCCCCTTSCSSCGGGCCCCCTTCCCHHHHHHHHHHHHHHHHHHHHSSCCCCCEEEEECTTTHHHHHHHHHH
T ss_pred CceEEEEEcCCccccCCCCCCCccceeecCCCCcHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCHHHHHHHHHh
Confidence 699999999999999999999999998 689999999999998854 4568 78999999999999999999998
Q ss_pred h--cC-CCCceEEEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCcc-cc
Q 012172 150 Y--SK-SNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDN-LG 225 (469)
Q Consensus 150 ~--~g-~~~~i~~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DN-L~ 225 (469)
| +| .+.+|++|.|+++||++.+|+++++++ ++++|+|+||||+|.+|..+|+|++|+++|++|+||+|+|| |+
T Consensus 181 ~~~fGl~~~~I~~f~Q~~~P~i~~~g~~~l~~~---~~~e~~P~GtGG~~~~L~~sg~L~~l~~~g~e~~~V~n~Dn~L~ 257 (505)
T 1jv1_A 181 HKYFGLKKENVIFFQQGMLPAMSFDGKIILEEK---NKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDNILV 257 (505)
T ss_dssp TGGGGSCGGGEEEEECCEEECEETTSCBCEEET---TEECEEECCGGGHHHHHHHTTHHHHHHHTTCCEEEEEETTBTTC
T ss_pred hhhcCCCcCceEEEEecceEEEcCCCcccccCC---cccccCCCCchHHHHHHHHcCcHHHHHhcCCCEEEEEECCcccc
Confidence 5 45 345799999999999999999999765 88999999999999999999999999999999999999999 79
Q ss_pred ccccHHHHHHHHHcCCcceEEEeeeccCCCcceEEEEeCCeeEEEEeccCChhhhhhcc--ccccccEEEEEeEEEeHHH
Q 012172 226 AIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFK--SIEKFKIFNTNNLWVNLKA 303 (469)
Q Consensus 226 ~~~dp~~Lg~~~~~~~~~~~~v~~k~~~~~~~G~iv~~~g~~~ivEy~~~~~e~~~~~~--~~~~~~~~Nt~~~~~~l~~ 303 (469)
+.+||.++||+..++++++++|++|+.+++++|+++.++|+++++||+|+|++.++.++ +...|+++|||+|||++++
T Consensus 258 ~~~d~~~lg~~~~~~~~~~~~v~~k~~~~e~~Gvl~~~dg~~~vvEy~E~p~~~~~~~~~~g~~~~~~~N~~~~~f~l~~ 337 (505)
T 1jv1_A 258 KVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVDGVYQVVEYSEISLATAQKRSSDGRLLFNAGNIANHFFTVPF 337 (505)
T ss_dssp CTTCHHHHHHHHHTTCSEEEEEEECCSTTCSCCEEEEETTEEEEECGGGSCHHHHHCBCTTSSBSSCEEEEEEEEEEHHH
T ss_pred ccchHHHHHHHHHcCCCEEEEEEEccCCccCcceEEEECCeEEEEEEeeCCHHHhhhcccccccccceeeEEEEEecHHH
Confidence 99999999999999999999999999999999999999999999999999998877664 4567899999999999999
Q ss_pred HHHHHHhcccccccccCCCcCC-----C-------cceehhHHHhhhHhhhcccceeEeecCc-cccccCCch------h
Q 012172 304 IKRLVEADALKMEIIPNPKEVD-----G-------IKVLQLETAAGAAIRFFDHAIGCNVHRS-RFLPVKATS------D 364 (469)
Q Consensus 304 L~~~l~~~~~~lp~~~n~K~~~-----g-------~~~iqle~~~~d~~~~~~~~~~v~v~r~-eF~pVKn~~------d 364 (469)
|+++.+.....||+|+|.|+++ | ++++|||++|||+|++++++.+++|+|+ ||+||||+. .
T Consensus 338 L~~i~~~~~~~l~~hv~~Kkip~~d~~g~~v~P~~pn~~klE~~i~d~~~~~~~~~~~~V~R~~~FsPvKn~~~~~~~ds 417 (505)
T 1jv1_A 338 LRDVVNVYEPQLQHHVAQKKIPYVDTQGQLIKPDKPNGIKMEKFVFDIFQFAKKFVVYEVLREDEFSPLKNADSQNGKDN 417 (505)
T ss_dssp HHHHHHTTGGGCCCEEEEECCCEECTTSCEECCSSCCEEEEECCGGGGGGGCSSEEEEEECHHHHCCBCCSCTTSSSSSS
T ss_pred HHHHHHhhcccCCceecccccccccCCCCCcCCCCCCceeHHHHHHHHHhhcCceEEEEECcccceeeccCCCCCCCCCC
Confidence 9999987678899999999774 2 4579999999999999999999999998 899999964 3
Q ss_pred HHHHHHHHHHhhcCceeecCCcc
Q 012172 365 LLLVQSDLYTLADGFVTRNEARK 387 (469)
Q Consensus 365 L~~~~~~~~~l~~g~l~~~~~r~ 387 (469)
..+|+++++.+++.|+..++..+
T Consensus 418 p~ta~~~l~~~~~~~l~~ag~~~ 440 (505)
T 1jv1_A 418 PTTARHALMSLHHCWVLNAGGHF 440 (505)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCee
Confidence 88999999999999998888766
No 10
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=99.96 E-value=1.5e-27 Score=254.24 Aligned_cols=337 Identities=14% Similarity=0.151 Sum_probs=221.4
Q ss_pred cceeEEEEcCCCCCcCCCCCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcC-CCCc
Q 012172 78 DKLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSK-SNVE 156 (469)
Q Consensus 78 ~k~avviLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g-~~~~ 156 (469)
+.++|||||||+||||++..||+|+|| .|||||+|+++.+..++-+ + +++.+++ ..+.++++|.++.. .+.+
T Consensus 11 ~~~~vvILAaG~GtRm~~~~pK~l~pv-~gkp~i~~~l~~~~~~g~~---~--i~vv~~~-~~~~i~~~~~~~~~~~~~~ 83 (501)
T 3st8_A 11 GDTAVLVLAAGPGTRMRSDTPKVLHTL-AGRSMLSHVLHAIAKLAPQ---R--LIVVLGH-DHQRIAPLVGELADTLGRT 83 (501)
T ss_dssp -CEEEEEEECSCCGGGCCSSCGGGCEE-TTEEHHHHHHHHHHHHCCS---E--EEEEECT-THHHHHHHHHHHHHHHTSC
T ss_pred CCceEEEECCcCcccCCCCCCHHHeEE-CChhHHHHHHHHHHhCCCC---E--EEEEeCC-CHHHHHHHHHHHHHhcCCc
Confidence 478999999999999999999999999 9999999999999988643 3 4444466 78899999976321 2346
Q ss_pred eEEEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCcc-ccccccH-HHHH
Q 012172 157 IHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDN-LGAIVDL-KILN 234 (469)
Q Consensus 157 i~~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DN-L~~~~dp-~~Lg 234 (469)
+.++.|.. |.|+||+.....+ .+.+.-..+++++++|. |....+. .++.
T Consensus 84 i~~~~q~~------------------------~lGTa~Av~~a~~-----~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~ 134 (501)
T 3st8_A 84 IDVALQDR------------------------PLGTGHAVLCGLS-----ALPDDYAGNVVVTSGDTPLLDADTLADLIA 134 (501)
T ss_dssp CEEEECSS------------------------CCCHHHHHHHHHT-----TSCTTCCSEEEEEETTCTTCCHHHHHHHHH
T ss_pred EEEEEcCC------------------------CCCcHHHHHHHHH-----HhccccccceeeecCcceeecHHHHHHHHH
Confidence 88888873 6899998543221 22222346899999999 7765433 4566
Q ss_pred HHHHcCCcceEEEeeeccCCCcceEEEE-eCCee-EEEEeccCChhhhhhccccccccEEEEEeEEEeHHHHHHHHHhcc
Q 012172 235 HLIQNKNEYCMEVTPKTLADVKGGTLIS-YEGKV-QLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADA 312 (469)
Q Consensus 235 ~~~~~~~~~~~~v~~k~~~~~~~G~iv~-~~g~~-~ivEy~~~~~e~~~~~~~~~~~~~~Nt~~~~~~l~~L~~~l~~~~ 312 (469)
++...++++.+.++ +..++.+||++++ .+|++ .++|..+.++++ ...+++|+|+|+|+.+.|+.++++
T Consensus 135 ~h~~~~~~~ti~~~-~~~dp~~yG~i~~~~~g~v~~ivEk~~~~~~~-------~~i~~in~Giy~f~~~~l~~~l~~-- 204 (501)
T 3st8_A 135 THRAVSAAVTVLTT-TLDDPFGYGRILRTQDHEVMAIVEQTDATPSQ-------REIREVNAGVYAFDIAALRSALSR-- 204 (501)
T ss_dssp HHHHTTCSEEEEEE-ECSCCTTSCEEEECTTCCEEEEECGGGCCHHH-------HHCCEEEEEEEEEEHHHHHHHHTT--
T ss_pred HHhhccccceEeee-ccCCchhccccccccceeEEeeccccCCChhh-------ccceeeeceeeeecchhHHHhhhh--
Confidence 67777777666544 4467788999987 56777 699999999988 667899999999999999999876
Q ss_pred cccccccCCCcCCCcceehhHHHhhhHhhhcccceeEeecC-ccccccCCchhHHHHHHHHH------HhhcCceeecCC
Q 012172 313 LKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHR-SRFLPVKATSDLLLVQSDLY------TLADGFVTRNEA 385 (469)
Q Consensus 313 ~~lp~~~n~K~~~g~~~iqle~~~~d~~~~~~~~~~v~v~r-~eF~pVKn~~dL~~~~~~~~------~l~~g~l~~~~~ 385 (469)
+.+++.. +++-. ...+.-+......+..+..+. ++..++++..+|+.++..++ .+..|....+|.
T Consensus 205 -----l~~~n~~-~e~yl--td~i~~~~~~g~~v~~~~~~~~~~~~g~n~~~~l~~~~~~~~~r~~~~~~~~gv~~~dp~ 276 (501)
T 3st8_A 205 -----LSSNNAQ-QELYL--TDVIAILRSDGQTVHASHVDDSALVAGVNNRVQLAELASELNRRVVAAHQLAGVTVVDPA 276 (501)
T ss_dssp -----CCCCSTT-CSCCT--THHHHHHHHTTCCEEEEECSSGGGGCCCSSHHHHHHHHHHHHHHHHHHHHHTTCEESCGG
T ss_pred -----hcccccc-cccch--hhHHHHHHhcCceEEEEeccchhhhcccccHHHHHHHHHHhhhhhhhhhcccCceeeeec
Confidence 6666644 44422 233332333334455556655 47899999999888776655 455677777766
Q ss_pred ccCCCCCeEEECCCcc-c----ccc-----cccccc-----------c----CC----------cccccCceEEEeeEEE
Q 012172 386 RKNPANPTIELGPEFK-K----VGN-----FLSRFK-----------S----IP----------SIIELDSLKVTGDVWF 430 (469)
Q Consensus 386 r~~~~~p~V~l~~~~~-~----~~~-----~~~~i~-----------~----~p----------~~~~~~~l~v~G~v~f 430 (469)
++. ..+.+.++++.. . +.. -..++. . .. .-.-.....+.+++.+
T Consensus 277 ~~~-i~~dv~IG~dv~I~~~v~i~g~~~Ig~~~~I~~~~~i~~~~i~~~~~i~~~~i~~~~ig~~~~ig~~~~i~~~~~i 355 (501)
T 3st8_A 277 TTW-IDVDVTIGRDTVIHPGTQLLGRTQIGGRCVVGPDTTLTDVAVGDGASVVRTHGSSSSIGDGAAVGPFTYLRPGTAL 355 (501)
T ss_dssp GEE-ECTTCEECTTCEECSSEEEETTCEECTTCEECSSCEEEEEEECTTCEECSEEEEEEEECTTCEECSSEEECTTCEE
T ss_pred ccc-ccCceEECCcceecceeeecCccccccceEEeeceeecCceEecCCEEEeecccccccccccccCCceeecCCcEE
Confidence 542 112222222211 0 000 000000 0 00 0000123445556677
Q ss_pred CCCcEEeeeEEEE-ecCCCceeeCCCCeeecceecCCCCC
Q 012172 431 GANITLKGKVTIA-AKSGEKLEIPDGAVLENKEINGPGDL 469 (469)
Q Consensus 431 g~~V~i~g~~~I~-~~~~~~~~I~~~s~le~~~v~~~~~~ 469 (469)
|++|+|+..|.|+ +..|+.+.|+..+++.+++|+.|++|
T Consensus 356 ~~~v~IG~~v~ik~s~Ig~gskI~~~~~i~d~~Ig~~v~I 395 (501)
T 3st8_A 356 GADGKLGAFVEVKNSTIGTGTKVPHLTYVGDADIGEYSNI 395 (501)
T ss_dssp CTTCEEEETEEEESCEECTTCEEEESCEEESEEECSSCEE
T ss_pred ccccccCCeEEEccceecCCcEEeccceecCceEcCCCEE
Confidence 7777777777777 34555566777777777777666543
No 11
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=99.87 E-value=1.6e-20 Score=196.50 Aligned_cols=310 Identities=17% Similarity=0.189 Sum_probs=200.1
Q ss_pred cceeEEEEcCCCCCcCCCCCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCCCCce
Q 012172 78 DKLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEI 157 (469)
Q Consensus 78 ~k~avviLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~~~~i 157 (469)
+++.+||||||.||||+.+.||.|+++ .|+|||+|.++++.+..- -.+++.|++ .++.++++++++ .+
T Consensus 7 ~~~~aiIlA~G~g~Rl~~~~pK~l~~i-~g~pli~~~l~~l~~~~~-----~~i~vv~~~-~~~~i~~~~~~~-----~~ 74 (459)
T 4fce_A 7 SSMSVVILAAGKGTRMYSDLPKVLHPL-AGKPMVQHVIDAAMKLGA-----QHVHLVYGH-GGELLKKTLADP-----SL 74 (459)
T ss_dssp CCEEEEEEECCCCGGGCCSSCGGGSEE-TTEEHHHHHHHHHHHHTC-----SCEEEEESS-CHHHHHHHC----------
T ss_pred CcceEEEECCCCCccCCCCCCcccCee-CCeeHHHHHHHHHHhCCC-----CcEEEEeCC-CHHHHHHHhccC-----Cc
Confidence 368999999999999999899999999 999999999999988742 245555565 467777776542 23
Q ss_pred EEEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCcc-ccccccHHHHHHH
Q 012172 158 HTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDN-LGAIVDLKILNHL 236 (469)
Q Consensus 158 ~~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DN-L~~~~dp~~Lg~~ 236 (469)
.++.|. .+.|+++......+ .+ ...++++++++|. |....+ +..+
T Consensus 75 ~~v~~~------------------------~~~g~~~~i~~~~~-----~~--~~~~~~lv~~~D~P~i~~~~---i~~l 120 (459)
T 4fce_A 75 NWVLQA------------------------EQLGTGHAMQQAAP-----HF--ADDEDILMLYGDVPLISVDT---LQRL 120 (459)
T ss_dssp CEEECS------------------------SCCCHHHHHHHHGG-----GS--CTTSEEEEEETTCTTCCHHH---HHHH
T ss_pred EEEeCC------------------------CCCCcHHHHHHHHH-----hc--CCCCcEEEEeCCcccCCHHH---HHHH
Confidence 333332 13556554332221 11 1247999999999 765544 3333
Q ss_pred HHc--CCcceEEEeeeccCCCcceEEEEeCCee-EEEEeccCChhhhhhccccccccEEEEEeEEEeHHHHHHHHHhccc
Q 012172 237 IQN--KNEYCMEVTPKTLADVKGGTLISYEGKV-QLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADAL 313 (469)
Q Consensus 237 ~~~--~~~~~~~v~~k~~~~~~~G~iv~~~g~~-~ivEy~~~~~e~~~~~~~~~~~~~~Nt~~~~~~l~~L~~~l~~~~~ 313 (469)
++. ..+.++-+++. ..+..+|++..++|++ .++|..+.++++ ....+.|+|.|+|+.+.|.++++.
T Consensus 121 ~~~~~~~~~~~~~~~~-~~~~~~g~v~~~~g~v~~~~ek~~~~~~~-------~~~~~~~~Giy~~~~~~l~~~l~~--- 189 (459)
T 4fce_A 121 LAAKPEGGIGLLTVKL-DNPSGYGRIVRENGDVVGIVEHKDASDAQ-------REINEINTGILVANGRDLKRWLSL--- 189 (459)
T ss_dssp HHHCCTTSEEEEEEEC-SCCTTSCEEEEETTEEEEEECGGGCCTTG-------GGCCEEEEEEEEEEHHHHHHHHHT---
T ss_pred HHHHhhCCEEEEEEec-CCCCcccEEEeCCCcEEEEEECCCCChHH-------hhccEEEEEEEEEEHHHHHHHHHH---
Confidence 332 23444434433 4557789888788887 477766555443 334678999999999999988875
Q ss_pred ccccccCCCcCCCcceehhHHHhhhHhhhcccceeEeecC-ccccccCCchhHHHHHHHHHH------hhcCceeecCCc
Q 012172 314 KMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHR-SRFLPVKATSDLLLVQSDLYT------LADGFVTRNEAR 386 (469)
Q Consensus 314 ~lp~~~n~K~~~g~~~iqle~~~~d~~~~~~~~~~v~v~r-~eF~pVKn~~dL~~~~~~~~~------l~~g~l~~~~~r 386 (469)
+.+.... +++ .+...+..+...-.++.++..+. +++..|++..||..++..+.. +..++....|..
T Consensus 190 ----~~~~~~~-~~~--~~~d~~~~~~~~g~~v~~~~~~~~~~~~~I~tp~Dl~~ae~~l~~~~~~~l~~~~~~~~~p~~ 262 (459)
T 4fce_A 190 ----LDNNNAQ-GEF--YITDIIALAHADGKKIATVHPTRLSEVEGVNNRLQLSALERVFQTEQAEKLLLAGVMLLDPSR 262 (459)
T ss_dssp ----CCCCSTT-CSC--CTTHHHHHHHHTTCCEEEECCSSGGGGCCCSSHHHHHHHHHHHHHHHHHHHHHHTCEESCGGG
T ss_pred ----hCccccC-CcE--EHHHHHHHHHHCCCeEEEEEcCCHHHhhCCCCHHHHHHHHHHHHHHHHHHHHhCCcEEeCCCe
Confidence 2222111 222 22333333334334566667764 688999999999999877653 233444444432
Q ss_pred cCCCCCeEEECCCcccccccccccccCCcccccCceEEEeeEEECCCcEEeeeEEEE-ecCCCceeeCCCCeeecceecC
Q 012172 387 KNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIA-AKSGEKLEIPDGAVLENKEING 465 (469)
Q Consensus 387 ~~~~~p~V~l~~~~~~~~~~~~~i~~~p~~~~~~~l~v~G~v~fg~~V~i~g~~~I~-~~~~~~~~I~~~s~le~~~v~~ 465 (469)
. ...|.+.++++.. | ...++|.|++.+|++|.|+.+|+|. ...|+.+.|.++++|++++|+.
T Consensus 263 ~-~~~~~~~ig~~~~--------i--------~~~~~i~~~~~ig~~~~I~~~~~i~~~~Ig~~~~I~~~~~i~~~~Ig~ 325 (459)
T 4fce_A 263 F-DLRGELTHGRDIT--------I--------DTNVIIEGHVILGDRVRIGTGCVLKNCVIGDDSEISPYTVLEDARLDA 325 (459)
T ss_dssp E-EEEEEEEECSSCE--------E--------CTTEEEEEEEEECTTCEECTTCEEESCEECTTCEECSSCEEESCEECT
T ss_pred E-EEeCcEEECCCcE--------E--------CCCeeeccceEECCCCEECCCCEEeccEECCCCEECCCcEEeCCEECC
Confidence 2 1123344544433 4 2678888889999999999888888 4467778888888888877776
Q ss_pred CCC
Q 012172 466 PGD 468 (469)
Q Consensus 466 ~~~ 468 (469)
+..
T Consensus 326 ~~~ 328 (459)
T 4fce_A 326 NCT 328 (459)
T ss_dssp TCE
T ss_pred CCE
Confidence 654
No 12
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=99.85 E-value=2.4e-19 Score=187.42 Aligned_cols=311 Identities=16% Similarity=0.175 Sum_probs=192.0
Q ss_pred cceeEEEEcCCCCCcCCCCCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCCCCce
Q 012172 78 DKLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEI 157 (469)
Q Consensus 78 ~k~avviLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~~~~i 157 (469)
.++.+||||||.||||+...||.|+++ .|+|||++.++++....- -.+++.|++ ..+.+.+++.++ .+
T Consensus 4 ~~~~aiIlA~G~g~Rl~~~~pK~l~~i-~gkpli~~~l~~l~~~~~-----~~iivv~~~-~~~~i~~~~~~~-----~~ 71 (456)
T 2v0h_A 4 KALSAVILAAGKGTRMYSDLPKVLHTI-AGKPMVKHVIDTAHQLGS-----ENIHLIYGH-GGDLMRTHLANE-----QV 71 (456)
T ss_dssp CCEEEEEECCCCCGGGCSSSCGGGSEE-TTEEHHHHHHHHHHHTTC-----SCEEEEECT-THHHHHHHTTTC-----CC
T ss_pred CcceEEEECCCCCcccCCCCCccccEE-CCccHHHHHHHHHHhCCC-----CcEEEEeCC-CHHHHHHHhhcC-----Cc
Confidence 367889999999999998889999999 999999999999987641 134555555 456666665432 24
Q ss_pred EEEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCcc-ccccccH-HHHHH
Q 012172 158 HTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDN-LGAIVDL-KILNH 235 (469)
Q Consensus 158 ~~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DN-L~~~~dp-~~Lg~ 235 (469)
.++.|. .+.|+++......+ .+ ...++++++++|+ |....+. .++..
T Consensus 72 ~~v~~~------------------------~~~g~~~~~~~~~~-----~~--~~~~~vlv~~~D~P~i~~~~i~~l~~~ 120 (456)
T 2v0h_A 72 NWVLQT------------------------EQLGTAHAVQQAAP-----FF--KDNENIVVLYGDAPLITKETLEKLIEA 120 (456)
T ss_dssp EEEECS------------------------CCCCHHHHHHHHGG-----GC--CTTSEEEEEETTCTTCCHHHHHHHHHH
T ss_pred EEEeCC------------------------CCCCcHHHHHHHHH-----hc--CCCCeEEEEcCCcceeCHHHHHHHHHH
Confidence 443332 13566554322211 11 1147999999999 7665442 22222
Q ss_pred HHHcCCcceEEEeeeccCCCcceEEEEeCCee-EEEEeccCChhhhhhccccccccEEEEEeEEEeHHHHHHHHHhcccc
Q 012172 236 LIQNKNEYCMEVTPKTLADVKGGTLISYEGKV-QLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALK 314 (469)
Q Consensus 236 ~~~~~~~~~~~v~~k~~~~~~~G~iv~~~g~~-~ivEy~~~~~e~~~~~~~~~~~~~~Nt~~~~~~l~~L~~~l~~~~~~ 314 (469)
+. ..+.++-+.+ ...+..+|.+..++|++ .++|..+..+++ ......|+|.|+|+.+.|.+.++.
T Consensus 121 ~~--~~~~~~~~~~-~~~~~~~g~v~~~~g~v~~~~ek~~~~~~~-------~~~~~~~~Giy~~~~~~l~~~l~~---- 186 (456)
T 2v0h_A 121 KP--ENGIALLTVN-LDNPTGYGRIIRENGNVVAIVEQKDANAEQ-------LNIKEVNTGVMVSDGASFKKWLAR---- 186 (456)
T ss_dssp CC--TTSEEEEEEE-CSSCTTSCEEEEETTEEEEEECTTTCCHHH-------HTCCEEEEEEEEEEHHHHHHHHTT----
T ss_pred Hh--cCCEEEEEee-cCCCCccceEEEcCCcEEEEEECCCCChhH-------hcCcEEEEEEEEEEHHHHHHHHHH----
Confidence 22 1344333333 34456788777667776 477766655443 234578999999999988887754
Q ss_pred cccccCCCcCCCcceehhHHHhhhHhhhcccceeEeec-CccccccCCchhHHHHHHHHHHh------hcCceeecCCcc
Q 012172 315 MEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVH-RSRFLPVKATSDLLLVQSDLYTL------ADGFVTRNEARK 387 (469)
Q Consensus 315 lp~~~n~K~~~g~~~iqle~~~~d~~~~~~~~~~v~v~-r~eF~pVKn~~dL~~~~~~~~~l------~~g~l~~~~~r~ 387 (469)
+...+.. ++. .+...+..+.....++.++.++ .+.|..|++..||..+++.+... ..+.....|...
T Consensus 187 ---~~~~~~~-~~~--~~~d~~~~~~~~g~~v~~~~~~~~~~~~~I~tpeDl~~a~~~l~~~~~~~~~~~~~~~~~~~~~ 260 (456)
T 2v0h_A 187 ---VGNNNAQ-GEY--YLTDLIALANQDNCQVVAVQATDVMEVEGANNRLQLAALERYFQNKQASKLLLEGVMIYDPARF 260 (456)
T ss_dssp ---CCCCSTT-CCC--CGGGHHHHHHHTTCCEEEEECSCTGGGCCCSSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGE
T ss_pred ---hcccccc-ccE--EHHHHHHHHHHcCCEEEEEEeCCcceEEeCCCHHHHHHHHHHHHHHHHHHHHHcCCEEECCCcc
Confidence 2211111 222 2222222233332345666775 46899999999999988876532 223322233211
Q ss_pred CCCCCeEEECCCcccccccccccccCCcccccCceEEEeeEEECCCcEEeeeEEEE-ecCCCceeeCCCCeeecceecCC
Q 012172 388 NPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIA-AKSGEKLEIPDGAVLENKEINGP 466 (469)
Q Consensus 388 ~~~~p~V~l~~~~~~~~~~~~~i~~~p~~~~~~~l~v~G~v~fg~~V~i~g~~~I~-~~~~~~~~I~~~s~le~~~v~~~ 466 (469)
...|.+.++++.. |. ..++|.|++.+|+||.|+.+|+|. ...|+.+.|.++++|++++|+.+
T Consensus 261 -~i~~~~~ig~~~~--------I~--------~~~~i~~~~~Ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~ig~~ 323 (456)
T 2v0h_A 261 -DLRGTLEHGKDVE--------ID--------VNVIIEGNVKLGDRVKIGTGCVLKNVVIGNDVEIKPYSVLEDSIVGEK 323 (456)
T ss_dssp -EEEEEEEECSSCE--------EC--------SSEEEEEEEEECTTCEECTTCEEEEEEECTTCEECSSCEEEEEEECTT
T ss_pred -EEcCceEECCCCE--------Ec--------CCcEEcCCcEECCCCEECCCCEEEeEEEeCCCEEcCCeEEccCcCCCC
Confidence 0123345554433 42 578888888888888888888887 44667777888887777766665
Q ss_pred CC
Q 012172 467 GD 468 (469)
Q Consensus 467 ~~ 468 (469)
..
T Consensus 324 ~~ 325 (456)
T 2v0h_A 324 AA 325 (456)
T ss_dssp CE
T ss_pred cE
Confidence 43
No 13
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=99.81 E-value=1.7e-18 Score=181.88 Aligned_cols=233 Identities=15% Similarity=0.154 Sum_probs=146.0
Q ss_pred eeEEEEcCCCCCcCCCCCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCCCCceEE
Q 012172 80 LVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHT 159 (469)
Q Consensus 80 ~avviLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~~~~i~~ 159 (469)
-.+||||||.||||+...||.|+++ .|+||+++.++++....- -.+++.|++ ..+.+.+++.+ .+.+
T Consensus 12 ~~~vIlAaG~g~R~~~~~pK~l~~i-~gkpli~~~l~~l~~~g~-----~~iivv~~~-~~~~i~~~~~~------~i~~ 78 (468)
T 1hm9_A 12 NFAIILAAGKGTRMKSDLPKVLHKV-AGISMLEHVFRSVGAIQP-----EKTVTVVGH-KAELVEEVLAG------QTEF 78 (468)
T ss_dssp EEEEEECCCCCGGGCCSSCGGGSEE-TTEEHHHHHHHHHHTTCC-----SEEEEEECT-THHHHHHSSSS------SSEE
T ss_pred CcEEEEcCCCCccCCCCCCcEeeEE-CCccHHHHHHHHHHhcCC-----CCEEEEECC-CHHHHHHHhCC------CcEE
Confidence 4578999999999998889999999 999999999999987631 134555555 44555444421 2444
Q ss_pred EEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCcc-ccccccH-HHHHHHH
Q 012172 160 FNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDN-LGAIVDL-KILNHLI 237 (469)
Q Consensus 160 f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DN-L~~~~dp-~~Lg~~~ 237 (469)
+.|. .+.|+++.+.... +.+ ....++++++++|+ |....+. .++..+.
T Consensus 79 v~~~------------------------~~~G~~~sl~~a~-----~~~-~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 128 (468)
T 1hm9_A 79 VTQS------------------------EQLGTGHAVMMTE-----PIL-EGLSGHTLVIAGDTPLITGESLKNLIDFHI 128 (468)
T ss_dssp EECS------------------------SCCCHHHHHHTTH-----HHH-TTCCSEEEEEETTCTTCCHHHHHHHHHHHH
T ss_pred EeCC------------------------ccCChHHHHHHHH-----HHh-ccCCCeEEEEeCCccccCHHHHHHHHHHHH
Confidence 3332 1456766543221 233 22247999999999 6665443 4555566
Q ss_pred HcCCcceEEEeeeccCCCcceEEEEe-CCee-EEEEeccCChhhhhhccccccccEEEEEeEEEeHHHHHHHHHhccccc
Q 012172 238 QNKNEYCMEVTPKTLADVKGGTLISY-EGKV-QLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKM 315 (469)
Q Consensus 238 ~~~~~~~~~v~~k~~~~~~~G~iv~~-~g~~-~ivEy~~~~~e~~~~~~~~~~~~~~Nt~~~~~~l~~L~~~l~~~~~~l 315 (469)
+.++++++.+.+. .++..+|.+..+ +|++ .++|..+.++++ ....+.|+|.|+|+.+.|.+.+++
T Consensus 129 ~~~~~~~i~~~~~-~~~~~~g~v~~d~~g~v~~~~ek~~~~~~~-------~~~~~~~~Giy~f~~~~l~~~l~~----- 195 (468)
T 1hm9_A 129 NHKNVATILTAET-DNPFGYGRIVRNDNAEVLRIVEQKDATDFE-------KQIKEINTGTYVFDNERLFEALKN----- 195 (468)
T ss_dssp HTTCSEEEEEEEC-SCCTTSCEEEECTTCCEEEEECTTTCCTTG-------GGCCEEEEEEEEEEHHHHHHHHTT-----
T ss_pred hcCCcEEEEEecc-CCCCceeEEEECCCCCEEEEEECCCCChHH-------hcCeEEEEEEEEEEHHHHHHHHHh-----
Confidence 6677766555444 445678877654 5665 466654333222 234578999999999988877754
Q ss_pred ccccCCCcCCCcceehhHHHhhhHhhhcccceeEeecC-ccccccCCchhHHHHHHHHH
Q 012172 316 EIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHR-SRFLPVKATSDLLLVQSDLY 373 (469)
Q Consensus 316 p~~~n~K~~~g~~~iqle~~~~d~~~~~~~~~~v~v~r-~eF~pVKn~~dL~~~~~~~~ 373 (469)
+...+.. ++. .+...+..++..-.++.++.++. +....|++..|+..++..+.
T Consensus 196 --~~~~~~~-~~~--~~~d~~~~l~~~g~~v~~~~~~g~~~~i~i~t~~dl~~a~~~~~ 249 (468)
T 1hm9_A 196 --INTNNAQ-GEY--YITDVIGIFRETGEKVGAYTLKDFDESLGVNDRVALATAESVMR 249 (468)
T ss_dssp --CCSCSTT-CSC--CTTHHHHHHHHHTCCEEEEECSSGGGGCCCCSHHHHHHHHHHHH
T ss_pred --hccccCC-CeE--EHHHHHHHHHHCCCEEEEEEcCChHHhhCCCCHHHHHHHHHHHH
Confidence 2222111 221 22333333333334566667653 56788999999998887664
No 14
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=99.76 E-value=5.7e-17 Score=169.83 Aligned_cols=256 Identities=14% Similarity=0.153 Sum_probs=142.5
Q ss_pred cceeEEEEcCCCCCcCC---CCCCccccccCCCC-chHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCC
Q 012172 78 DKLVVLKLNGGLGTTMG---CTGPKSVIEVRNGL-TFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKS 153 (469)
Q Consensus 78 ~k~avviLAGG~GTRmg---~~~PK~l~~v~~gk-s~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~ 153 (469)
+++.+||||||+||||+ .+.||.|+|+ .|+ ||+++.++++.+.+-+ .+++.+++ .++.+.+++.+..+.
T Consensus 19 ~~~~avILAaG~gtRl~plT~~~pK~llpi-~g~~pli~~~l~~l~~~g~~-----~i~vv~~~-~~~~i~~~~~~~~~~ 91 (451)
T 1yp2_A 19 RSVLGIILGGGAGTRLYPLTKKRAKPAVPL-GANYRLIDIPVSNCLNSNIS-----KIYVLTQF-NSASLNRHLSRAYAS 91 (451)
T ss_dssp HHEEEEEC------CCTTTTTTSCGGGCEE-TTTEETTHHHHHHHHHTTCC-----EEEEEESC-CCHHHHHHHHHHCC-
T ss_pred cceEEEEECCCCCCcccchhcCCcceeeEE-CCcceeHHHHHHHHHHCCCC-----EEEEEecc-CHHHHHHHHhhhhhc
Confidence 35789999999999999 6789999999 899 9999999999876422 35555565 667888888753220
Q ss_pred CCceE-EEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCccccccccH-H
Q 012172 154 NVEIH-TFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVDL-K 231 (469)
Q Consensus 154 ~~~i~-~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DNL~~~~dp-~ 231 (469)
++. ++.+..+..+..+ .. ......+.|+|+..... ++.+...+.++++|+++|++... |. .
T Consensus 92 --~~~~~~~~~~v~i~~~~-----~~----~~~~~~~~Gt~~al~~a-----~~~~~~~~~~~~lv~~~D~~~~~-~l~~ 154 (451)
T 1yp2_A 92 --NMGGYKNEGFVEVLAAQ-----QS----PENPDWFQGTADAVRQY-----LWLFEEHTVLEYLILAGDHLYRM-DYEK 154 (451)
T ss_dssp ---------CCEEEEEESC-----SS----TTSCCCCCSHHHHHHHT-----HHHHTTSCCSEEEEECSCEECCC-CHHH
T ss_pred --ccccccccCcEEEeccc-----cc----ccccccccCcHHHHHHH-----HHHHHhcCCCeEEEecCcEEEcC-CHHH
Confidence 010 0011101100000 00 00112256887765432 22332224589999999996543 43 5
Q ss_pred HHHHHHHcCCcceEEEeeec-cCCCcceEEEEe-CCee-EEEEeccCChhhhhhcc------------ccccccEEEEEe
Q 012172 232 ILNHLIQNKNEYCMEVTPKT-LADVKGGTLISY-EGKV-QLLEIAQVPDEHVNEFK------------SIEKFKIFNTNN 296 (469)
Q Consensus 232 ~Lg~~~~~~~~~~~~v~~k~-~~~~~~G~iv~~-~g~~-~ivEy~~~~~e~~~~~~------------~~~~~~~~Nt~~ 296 (469)
++.++.++++++++.+.+.. .++..+|++..+ +|++ .++|..+.++ ...++ ......+.|+|+
T Consensus 155 l~~~~~~~~~~~tl~~~~~~~~~~~~~g~v~~d~~~~v~~~~ekp~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~Gi 232 (451)
T 1yp2_A 155 FIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFAEKPQGEQ--LQAMKVDTTILGLDDKRAKEMPFIASMGI 232 (451)
T ss_dssp HHHHHHHTTCSEEEEEEEECHHHHTTSEEEEECTTSBEEEEEESCCHHH--HHHTCCCGGGGSCCHHHHHHCCEEEEEEE
T ss_pred HHHHHHHcCCcEEEEEEEcChhhcccCCEEEECCCCCEEEEEECCCchh--hccccccccccccccccccCCcceEEeeE
Confidence 67777777777766554432 245678987764 5666 4666543221 11110 001235779999
Q ss_pred EEEeHHHHHHHHHhcccccccccCCCcCCCcceehhHHHhhhHhhhcccceeEeecCccccccCCchhHHHHHHHHH
Q 012172 297 LWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLY 373 (469)
Q Consensus 297 ~~~~l~~L~~~l~~~~~~lp~~~n~K~~~g~~~iqle~~~~d~~~~~~~~~~v~v~r~eF~pVKn~~dL~~~~~~~~ 373 (469)
|+|+.+.|.+++++.. ...... .+.++ ..++..-.++.++.++ ..+..|.+..|+..+++++.
T Consensus 233 y~~~~~~l~~~l~~~~------~~~~~~-~~~~l------~~~i~~g~~v~~~~~~-~~w~digt~~~l~~a~~~l~ 295 (451)
T 1yp2_A 233 YVISKDVMLNLLRDKF------PGANDF-GSEVI------PGATSLGMRVQAYLYD-GYWEDIGTIEAFYNANLGIT 295 (451)
T ss_dssp EEEEHHHHHHHHHTTC------TTCCCT-TTTHH------HHHHHTTCCEEEEECC-SCCEECSSHHHHHHHHHGGG
T ss_pred EEEcHHHHHHHHHhhc------ccccch-HhhHH------HHHHhcCCceEEEEeC-CEEEECCCHHHHHHHHHHHh
Confidence 9999999988876510 011101 11222 1222221234444432 36788999999999887764
No 15
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=99.75 E-value=1.3e-16 Score=165.80 Aligned_cols=338 Identities=11% Similarity=0.073 Sum_probs=189.5
Q ss_pred cceeEEEEcCCCCCcCC---CCCCccccccCCCC-chHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCC
Q 012172 78 DKLVVLKLNGGLGTTMG---CTGPKSVIEVRNGL-TFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKS 153 (469)
Q Consensus 78 ~k~avviLAGG~GTRmg---~~~PK~l~~v~~gk-s~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~ 153 (469)
+++.+||||||.||||+ .+.||.|+|+ .|+ ||+++.++++.+.+-+ .+++.|++ .++.+.+++++..+.
T Consensus 11 ~~~~avILAaG~gtRl~plT~~~pK~llpi-~gk~pli~~~l~~l~~~gi~-----~i~vv~~~-~~~~i~~~~~~~~~~ 83 (420)
T 3brk_X 11 RDAMAYVLAGGRGSRLKELTDRRAKPAVYF-GGKARIIDFALSNALNSGIR-----RIGVATQY-KAHSLIRHLQRGWDF 83 (420)
T ss_dssp GGEEEEEEECCCCGGGGGGGSSSCGGGSEE-TTTEETHHHHHHHHHHTTCC-----EEEEEECT-TCHHHHHHHHHHSCC
T ss_pred hceEEEEEcCCCCCccchhhcCCccccccc-CCCCcHHHHHHHHHHhCCCC-----eEEEEeCC-ChHHHHHHHhhhhcc
Confidence 36789999999999999 7889999999 899 9999999999876411 34555555 568888888763221
Q ss_pred C-----CceEEEEecCcceecCCCCcccCCCCCCCCccccc---CCCcccchhccccchHHHHHHcCCcEEEEEeCcccc
Q 012172 154 N-----VEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYP---PGHGDVFPSLMNSGKLDALISQGKEYVFAANSDNLG 225 (469)
Q Consensus 154 ~-----~~i~~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P---~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DNL~ 225 (469)
. ..+.+.. + ......| .|+++..... ++.+...+.++++|+++|++.
T Consensus 84 ~~~~~~~~v~i~~-----------------~---~~~~~~~~~~~Gt~~al~~a-----~~~l~~~~~~~~lv~~~D~~~ 138 (420)
T 3brk_X 84 FRPERNESFDILP-----------------A---SQRVSETQWYEGTADAVYQN-----IDIIEPYAPEYMVILAGDHIY 138 (420)
T ss_dssp CCGGGTCEEEEEC-----------------C---C-------CCCCHHHHHHTT-----HHHHHHHCCSEEEEEESSCEE
T ss_pred ccccccCCEEEeC-----------------c---cccccCCccccCCHHHHHHH-----HHHHHhcCCCEEEEecccEEE
Confidence 1 0121110 0 0000012 6777765432 234433345799999999964
Q ss_pred ccccHHHHHHHHHcCCcceEEEeee-ccCCCcceEEEEe-CCee-EEEEeccCChhhhhhccccccccEEEEEeEEEeHH
Q 012172 226 AIVDLKILNHLIQNKNEYCMEVTPK-TLADVKGGTLISY-EGKV-QLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLK 302 (469)
Q Consensus 226 ~~~dp~~Lg~~~~~~~~~~~~v~~k-~~~~~~~G~iv~~-~g~~-~ivEy~~~~~e~~~~~~~~~~~~~~Nt~~~~~~l~ 302 (469)
...--.++..+.++++++++.+.+. ..++..+|++..+ +|++ .++|..+.+... .......+.|+|+|+|+.+
T Consensus 139 ~~~l~~l~~~~~~~~~~~tl~~~~~~~~~~~~~g~v~~d~~g~v~~~~ekp~~~~~~----~~~~~~~~~~~Giy~~~~~ 214 (420)
T 3brk_X 139 KMDYEYMLQQHVDSGADVTIGCLEVPRMEATGFGVMHVNEKDEIIDFIEKPADPPGI----PGNEGFALASMGIYVFHTK 214 (420)
T ss_dssp CBCTHHHHHHHHHTTCSEEEEEEEEETTGGGGSEEEEECTTSBEEEEEESCSSCCCB----TTBTTEEEEEEEEEEEEHH
T ss_pred chHHHHHHHHHHHcCCeEEEEEeecCccccCcccEEEECCCCcEEEeEeCCCccccc----cccccceEEeeeeEEEeHH
Confidence 4322356777777777776665443 2345678988764 5776 466643222110 0112245789999999999
Q ss_pred HHHHHHHhcccccccccCCCcCCCcceehhHHHhhhHhhhcccceeEeec----------CccccccCCchhHHHHHHHH
Q 012172 303 AIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVH----------RSRFLPVKATSDLLLVQSDL 372 (469)
Q Consensus 303 ~L~~~l~~~~~~lp~~~n~K~~~g~~~iqle~~~~d~~~~~~~~~~v~v~----------r~eF~pVKn~~dL~~~~~~~ 372 (469)
.|.+++++ ....+.. .+. + ...++..++... ++.++.++ ...+.-|.+..|+..++.++
T Consensus 215 ~l~~~l~~-------~~~~~~~-~~~-~-~~d~l~~li~~g-~v~~~~~~~~~~~~~~~~~~~~~dI~t~~d~~~a~~~l 283 (420)
T 3brk_X 215 FLMEAVRR-------DAADPTS-SRD-F-GKDIIPYIVEHG-KAVAHRFADSCVRSDFEHEPYWRDVGTIDAYWQANIDL 283 (420)
T ss_dssp HHHHHHTS-------SCCC-------------CTTHHHHHS-CEEEEEHHHHBCCCTTCSSCCEECCCSHHHHHHHHHHT
T ss_pred HHHHHHHH-------hcccCCc-ccc-c-hHHHHHHHhhhC-cEEEEEeccccccccccCCCEEEECCCHHHHHHHHHHH
Confidence 98877754 1111000 000 0 011111122221 34445552 34688999999999988775
Q ss_pred HHhhcCceeecCC-cc---CCCCCeEEECCC----cccccccccccccCCcccccCceEEEeeEEECCCcEEeeeEEEE-
Q 012172 373 YTLADGFVTRNEA-RK---NPANPTIELGPE----FKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIA- 443 (469)
Q Consensus 373 ~~l~~g~l~~~~~-r~---~~~~p~V~l~~~----~~~~~~~~~~i~~~p~~~~~~~l~v~G~v~fg~~V~i~g~~~I~- 443 (469)
.......-...+. .+ ....|.+.+++. -..+. ...|. ....+ ..++|+ ++++|++|+|+.+|+|.
T Consensus 284 l~~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~~~~~~~i~--~~~ig-~~~~I--~~~~i~-~~~ig~~~~I~~~~~i~~ 357 (420)
T 3brk_X 284 TDVVPDLDIYDKSWPIWTYAEITPPAKFVHDDEDRRGSAV--SSVVS-GDCII--SGAALN-RSLLFTGVRANSYSRLEN 357 (420)
T ss_dssp TSSSCSSCTTCCSSCCCCCCCCCCCCEEECBCSSCBCEEE--SCEEC-SSCEE--ESCEEE-SCEECTTCEECTTCEEEE
T ss_pred hCCCchhhcCCCCCceeeccccCCCcEEecccccCCcEec--CCEEC-CCCEE--cCCEEe-CcEEcCCCEECCCCEEcc
Confidence 3221110000000 00 011233444331 00000 11121 11111 122332 48888888888888887
Q ss_pred ecCCCceeeCCCCeeecceecCCCC
Q 012172 444 AKSGEKLEIPDGAVLENKEINGPGD 468 (469)
Q Consensus 444 ~~~~~~~~I~~~s~le~~~v~~~~~ 468 (469)
+..++.+.|.++++|.+++|+.+..
T Consensus 358 ~~i~~~~~i~~~~~i~~~~ig~~~~ 382 (420)
T 3brk_X 358 AVVLPSVKIGRHAQLSNVVIDHGVV 382 (420)
T ss_dssp EEECTTCEECTTCEEEEEEECTTCE
T ss_pred eEEcCCCEECCCCEEeceEECCCCE
Confidence 4467778899999999988887754
No 16
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=99.66 E-value=1.1e-14 Score=149.69 Aligned_cols=307 Identities=12% Similarity=0.081 Sum_probs=169.4
Q ss_pred eEEEEcCCCCCcCC---CCCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCCCCce
Q 012172 81 VVLKLNGGLGTTMG---CTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEI 157 (469)
Q Consensus 81 avviLAGG~GTRmg---~~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~~~~i 157 (469)
.+|+||||.||||+ ...||.|+++ .|+||+++.++++.+..-+ .+++.+++. +++++++.. ..+
T Consensus 2 ~aiIlA~G~g~R~~plt~~~~K~ll~i-~g~pli~~~l~~l~~~~~~-----~i~vv~~~~----i~~~~~~~~---~~i 68 (401)
T 2ggo_A 2 KAFILAAGSGERLEPITHTRPKAFVPI-LSKPLIEYQIEYLRKCGIR-----DITVIVSSK----NKEYFEKKL---KEI 68 (401)
T ss_dssp EEEEECCCCCGGGTTGGGTSCGGGCEE-TTEEHHHHHHHHHHHTTCC-----EEEEEECGG----GHHHHHHHC---TTC
T ss_pred eEEEEcCcCccccCcccCCCCcceeeE-CCEeHHHHHHHHHHHCCCC-----EEEEEeCHH----HHHHhhccC---CcE
Confidence 47899999999998 4779999999 9999999999999876411 344544442 667776531 124
Q ss_pred EEEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCccccccccHHHHHHHH
Q 012172 158 HTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVDLKILNHLI 237 (469)
Q Consensus 158 ~~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DNL~~~~dp~~Lg~~~ 237 (469)
.++.+.. .|.|.++.+....+ .++++++++|++.. ++..+..++
T Consensus 69 ~~~~~~~-----------------------~~~g~~~~l~~~~~-----------~~~~lv~~~D~~~~--~~~~~~~l~ 112 (401)
T 2ggo_A 69 SIVTQKD-----------------------DIKGTGAAILSAKF-----------NDEALIIYGDLFFS--NEKEICNII 112 (401)
T ss_dssp EEEECCT-----------------------TCCBSTTTGGGCCC-----------SSEEEEEETTEEES--CSHHHHHHT
T ss_pred EEEeCCC-----------------------CCCChHHHHHHhcc-----------CCCEEEEeCccccc--cHHHHHHHH
Confidence 4433321 14566665443321 37899999999322 223355555
Q ss_pred HcCCcceEEEeeeccCCCcceEEEEe-CCee-EEEEeccCChhhhhhccccccccEEEEEeEEEeHHHHHHHHHhccccc
Q 012172 238 QNKNEYCMEVTPKTLADVKGGTLISY-EGKV-QLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKM 315 (469)
Q Consensus 238 ~~~~~~~~~v~~k~~~~~~~G~iv~~-~g~~-~ivEy~~~~~e~~~~~~~~~~~~~~Nt~~~~~~l~~L~~~l~~~~~~l 315 (469)
+ ..+..+.+.+. .++.++|.+... +|++ .+.|..+. ....+.|+|.|+++.+.++. +++
T Consensus 113 ~-~~~~~i~~~~~-~~~~~~~~v~~~~~g~v~~~~ek~~~-----------~~~~~~~~Giy~~~~~~~~~-l~~----- 173 (401)
T 2ggo_A 113 T-LKENAIIGVKV-SNPKDYGVLVLDNQNNLSKIIEKPEI-----------PPSNLINAGIYKLNSDIFTY-LDK----- 173 (401)
T ss_dssp T-CSSEEEEEEEC-SCCSSSCEEEECTTSSEEEEECSCSS-----------CSCSEEEEEEEEEETHHHHH-HHH-----
T ss_pred H-hcCCEEEEEEc-CCCcceeEEEECCCCeEEEEEECCCC-----------CCCcEEEEEEEEEcHHHHHH-hhh-----
Confidence 4 34444444433 445567876654 4655 34442211 12357899999999998754 443
Q ss_pred ccccCCCcCCCcceehhHHHhhhHhhhcccceeEeecCccccccCCchhHHHHHHHHHHhhcCc----eeecCCccCCCC
Q 012172 316 EIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLYTLADGF----VTRNEARKNPAN 391 (469)
Q Consensus 316 p~~~n~K~~~g~~~iqle~~~~d~~~~~~~~~~v~v~r~eF~pVKn~~dL~~~~~~~~~l~~g~----l~~~~~r~~~~~ 391 (469)
+... ..++ +.+...+..+ ....++.++..+. .|.-|++.+|+..+++.+....... .....+. ..
T Consensus 174 --~~~~--~~~~--~~~~~~~~~~-~~g~~v~~~~~~~-~~~dI~t~edl~~a~~~l~~~~~~~~~~~~i~~~~~---i~ 242 (401)
T 2ggo_A 174 --ISIS--ERGE--LELTDAINLM-AKDHRVKVIEYEG-YWMDIGKPWNIIDVNKWALDNLVFSQNLGNVEDNVK---IK 242 (401)
T ss_dssp --SCCC--SSSC--BCHHHHHHHH-HHHSCEEEEECCS-CEEECCSHHHHHHHHHHHHHHTCCCEECSEECSSCE---EE
T ss_pred --cCcC--CCCc--eEHHHHHHHH-HCCCcEEEEEecc-eEEcCCCHHHHHHHHHHHHHhcccccccceeCCCCE---Ec
Confidence 1110 1122 2222332222 2223444455443 7889999999999988875432211 0111111 11
Q ss_pred CeEEECCCcccccccccccccCCcccc----cCceEEEeeEEECCCcEEeeeEEEE-ecCCCceeeCCCCeeecceecCC
Q 012172 392 PTIELGPEFKKVGNFLSRFKSIPSIIE----LDSLKVTGDVWFGANITLKGKVTIA-AKSGEKLEIPDGAVLENKEINGP 466 (469)
Q Consensus 392 p~V~l~~~~~~~~~~~~~i~~~p~~~~----~~~l~v~G~v~fg~~V~i~g~~~I~-~~~~~~~~I~~~s~le~~~v~~~ 466 (469)
|.+.+++... +.. ...+.+.-.|-+ ...++|.+++++|++|.|+.+|.|. +..++.+.|.+++++++++|+.+
T Consensus 243 ~~~~ig~~~~-I~~-~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~ig~~~~i~~~~i~~~~~i~~~~~i~~~~Ig~~ 320 (401)
T 2ggo_A 243 GKVIIEEDAE-IKS-GTYIEGPVYIGKGSEIGPNSYLRPYTILVEKNKIGASVEVKESVIMEGSKIPHLSYVGDSVIAED 320 (401)
T ss_dssp SCEEECTTCE-ECT-TCEEESSEEECTTCEECSSCEECTTEEECSSCEEEETCEEESEEECTTCEEEESCEEESCEECTT
T ss_pred CCeEEcCCCE-ECC-CCEEeCCeEECCCCEECCCCEEcCCcEECCCCEECCCCEEecCEEcCCcEECCCceEcceEECCC
Confidence 2234433311 000 000100000000 1345566677777777777777775 33556667777777777777665
Q ss_pred CC
Q 012172 467 GD 468 (469)
Q Consensus 467 ~~ 468 (469)
..
T Consensus 321 ~~ 322 (401)
T 2ggo_A 321 VN 322 (401)
T ss_dssp CE
T ss_pred cE
Confidence 43
No 17
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=99.61 E-value=1.4e-15 Score=147.73 Aligned_cols=235 Identities=11% Similarity=0.093 Sum_probs=145.3
Q ss_pred ceeEEEEcCCCCCcCCCCCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCCCCceE
Q 012172 79 KLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIH 158 (469)
Q Consensus 79 k~avviLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~~~~i~ 158 (469)
++.+||||||.||||+ ||.|+++ .||||++|+++++...+-. .+++.| .++.+.++++++ | .++.
T Consensus 2 ~~~aiIlA~G~stRlp---~K~L~~i-~GkPli~~~l~~l~~~~~~-----~ivVv~---~~~~i~~~~~~~-g--~~v~ 66 (252)
T 3oam_A 2 SFTVVIPARYQSTRLP---GKPLADI-GGKPMIQWVYEQAMQAGAD-----RVIIAT---DDERVEQAVQAF-G--GVVC 66 (252)
T ss_dssp CEEEEEECCCCCSSST---TGGGCEE-TTEEHHHHHHHHHHHTTCS-----EEEEEE---SCHHHHHHHHHT-T--CEEE
T ss_pred ceEEEEecCcCCCCCC---CcceeeE-CCEEHHHHHHHHHHhCCCC-----eEEEEC---CHHHHHHHHHHc-C--CEEE
Confidence 6789999999999995 8999999 9999999999999876421 345544 258888888763 1 2222
Q ss_pred EEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCcc-ccccccH-HHHHHH
Q 012172 159 TFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDN-LGAIVDL-KILNHL 236 (469)
Q Consensus 159 ~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DN-L~~~~dp-~~Lg~~ 236 (469)
+..|. .|.|+|+++.++. .+...+.++++++++|+ |....+. .++..+
T Consensus 67 ~~~~~------------------------~~~Gt~~~~~~~~------~l~~~~~d~vlv~~gD~Pli~~~~i~~l~~~~ 116 (252)
T 3oam_A 67 MTSPN------------------------HQSGTERLAEVVA------KMAIPADHIVVNVQGDEPLIPPAIIRQVADNL 116 (252)
T ss_dssp ECCTT------------------------CCSHHHHHHHHHH------HTTCCTTSEEEECCTTCTTCCHHHHHHHHHHH
T ss_pred EcCCC------------------------CCCcHHHHHHHHH------hcCcCCCCEEEEEeCCeeecCHHHHHHHHHHH
Confidence 11121 3678888654432 22112457999999999 7765443 455666
Q ss_pred HHcCCcceEEEeeeccCCCcc-----eEEEE-eCCeeEEEEecc--CChhhhhhccc----cccccEEEEEeEEEeHHHH
Q 012172 237 IQNKNEYCMEVTPKTLADVKG-----GTLIS-YEGKVQLLEIAQ--VPDEHVNEFKS----IEKFKIFNTNNLWVNLKAI 304 (469)
Q Consensus 237 ~~~~~~~~~~v~~k~~~~~~~-----G~iv~-~~g~~~ivEy~~--~~~e~~~~~~~----~~~~~~~Nt~~~~~~l~~L 304 (469)
.++++++++.+++-. +++.+ |+++. .+|++ +..+. ++.. .+.+.. .....+.|+|+|+|+.++|
T Consensus 117 ~~~~~~~~~~~~~v~-~~~~~~~p~~g~vv~d~~g~v--~~fsr~~i~~~-~~~~~~~~~~~~~~~~~n~GiY~~~~~~l 192 (252)
T 3oam_A 117 AACSAPMATLAVEIE-DEAEVFNPNAVKVITDKSGYA--LYFSRATIPWD-RDNFAKADKAIVQPLLRHIGIYAYRAGFI 192 (252)
T ss_dssp HHSSCSEEEEEEEEC-CHHHHTCTTSCEEEECTTSBE--EEEESSCSSCC-HHHHHSSSCCCCSCEEEEEEEEEEETTHH
T ss_pred HhcCCCEEEEeeecC-CHHHhhCCCceEEEECCCCeE--EEEeCCCCCCC-CCccccccccccccceEEEEEEEcCHHHH
Confidence 666667666555443 33444 77766 46765 33332 2211 111100 0124567999999999999
Q ss_pred HHHHHhcccccccccCCCcCCCcceehhHHHhhhHhhhcccceeEeecCccccccCCchhHHHHHHHHHHh
Q 012172 305 KRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLYTL 375 (469)
Q Consensus 305 ~~~l~~~~~~lp~~~n~K~~~g~~~iqle~~~~d~~~~~~~~~~v~v~r~eF~pVKn~~dL~~~~~~~~~l 375 (469)
+.+.... .+.... .| .||... ++..-.++.++.++..++.+|+++.||+.+++.++..
T Consensus 193 ~~~~~~~-------~~~~e~-~E---~le~lr--~l~~G~~i~~~~~~~~~~~~idt~~dl~~a~~~~~~r 250 (252)
T 3oam_A 193 NTYLDWQ-------PSQLEK-IE---CLEQLR--VLWHGEKIHVAVALEAPPAGVDTPEDLEVVRRIVAER 250 (252)
T ss_dssp HHHHHSC-------CCHHHH-HH---TCTTHH--HHHTTCCEEEEECSSCCCCCCCSHHHHHHHHHHHHHT
T ss_pred HHHHcCC-------CCcccc-cc---hhHHHH--HHHCCCeEEEEEecCCCCCCCCCHHHHHHHHHHHHhh
Confidence 9987531 011100 12 112111 1222234555545556899999999999999887653
No 18
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=99.60 E-value=5e-14 Score=140.52 Aligned_cols=267 Identities=14% Similarity=0.086 Sum_probs=160.8
Q ss_pred cceeEEEEcCCCCCcCCCCCCccccccC-CCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCCCCc
Q 012172 78 DKLVVLKLNGGLGTTMGCTGPKSVIEVR-NGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVE 156 (469)
Q Consensus 78 ~k~avviLAGG~GTRmg~~~PK~l~~v~-~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~~~~ 156 (469)
+++.+||||||+||||+. ||.|+|+. .|+|++++.++++...+-. .+++.|++...+.++++|........+
T Consensus 4 m~~~~vIlAaG~g~R~~~--~K~l~~ig~~g~pli~~~l~~~~~~~~~-----~i~vv~~~~~~~~~~~~~~~~~~~~~~ 76 (303)
T 3pnn_A 4 MKPTLFVLAAGMGSRYGS--LKQLDGIGPGGDTIMDYSVYDAIRAGFG-----RLVFVIRHSFEKEFREKILTKYEGRIP 76 (303)
T ss_dssp CCCEEEEECTTCBCTTSS--BCCCCCCSTTSCCHHHHHHHHHHHHTCC-----EEEEEECGGGHHHHHHHTHHHHTTTSC
T ss_pred CceEEEEECCCCcccCCC--CceEeEcCCCCeeHHHHHHHHHHHCCCC-----eEEEEcCchHHHHHHHHHHHHhccCCc
Confidence 357889999999999997 89999995 6999999999998776421 345555653247888888753222235
Q ss_pred eEEEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCccccccccH-HHHHH
Q 012172 157 IHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVDL-KILNH 235 (469)
Q Consensus 157 i~~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DNL~~~~dp-~~Lg~ 235 (469)
+.+..|.... +.....+.. ....|.|+|++.....+. + -+.++|+|+|++....+. .++.+
T Consensus 77 i~~~~~~~~~-~~~~~~~~~--------~~~~~~Gt~~al~~a~~~-----i----~~~~lV~~gD~l~~~~~~~~l~~~ 138 (303)
T 3pnn_A 77 VELVFQELDR-LPEGFSCPE--------GREKPWGTNHAVLMGRDA-----I----REPFAVINADDFYGRNGFEVLARK 138 (303)
T ss_dssp EEEEECCTTC-CCTTCCCCT--------TCCSCCCHHHHHHTTTTT-----C----CSCEEEEESSCBCCHHHHHHHHHH
T ss_pred EEEEeccccc-ccccccccc--------cccccCCcHHHHHHHHHh-----c----CCCEEEEECCeecCHHHHHHHHHH
Confidence 7777787321 111111111 112478999886544331 1 256889999997643222 35566
Q ss_pred HHH---cCCcceEEEeeeccCCCcc-----eEEEEe-CCee-EEEEeccCChhhh----hhccc----cccccEEEEEeE
Q 012172 236 LIQ---NKNEYCMEVTPKTLADVKG-----GTLISY-EGKV-QLLEIAQVPDEHV----NEFKS----IEKFKIFNTNNL 297 (469)
Q Consensus 236 ~~~---~~~~~~~~v~~k~~~~~~~-----G~iv~~-~g~~-~ivEy~~~~~e~~----~~~~~----~~~~~~~Nt~~~ 297 (469)
+.+ .++++++.+.+..++-..+ |++..+ +|++ .++|..+.++++- .+.++ .....+.|+|.|
T Consensus 139 ~~~~~~~~~~~~v~~~~~~~~~~~~g~~~~G~v~~d~~g~v~~i~Ekp~~~~~~~~~~~~~~~g~~~~~~~~~~i~~GiY 218 (303)
T 3pnn_A 139 LMTLEGKQGEYCMVGYRVGNTLSESGGVSRGVCQVDEKHLLTGVVERTGIERTDGTISFRDETGKICTLAEDAPVSMNMW 218 (303)
T ss_dssp HHTTTTCSSEEEEEEEEGGGSCBTTBCEEEEEEEECTTSBEEEEEEEEEEEEETTEEEEECTTSCEEEECTTCEEEEEEE
T ss_pred HHHhccccCceEEEEEECCCccCccCceeeeeEeeCCCCcEEEEEECCCCccccccccccccccccccCCCCCEEEEEEE
Confidence 654 3456655554443441444 566655 6887 5888876542110 00000 013568899999
Q ss_pred EEeHHHHHHHHHhcccccccc--cCCCcCCCcceehhHHHhhhHhhhcc-cceeEeecCccccccCCchhHHHHHHHHHH
Q 012172 298 WVNLKAIKRLVEADALKMEII--PNPKEVDGIKVLQLETAAGAAIRFFD-HAIGCNVHRSRFLPVKATSDLLLVQSDLYT 374 (469)
Q Consensus 298 ~~~l~~L~~~l~~~~~~lp~~--~n~K~~~g~~~iqle~~~~d~~~~~~-~~~~v~v~r~eF~pVKn~~dL~~~~~~~~~ 374 (469)
+|+.+.+..+-... ..++ .+.+ ..++ +.+..++..++..-. ++.++..+ ..+..|+++.|++.+++.++.
T Consensus 219 ~f~~~~~~~l~~~~---~~~l~~~~~~-~~~e--~~l~d~i~~li~~g~~~v~~~~~~-g~w~dIgt~~dl~~a~~~l~~ 291 (303)
T 3pnn_A 219 GFTPDYFDYSEELF---INFLNAHGQE-PKSE--FFIPFVVNDLIRSGRASVEVLDTT-ARWFGVTYSDDRPGVVAKLRE 291 (303)
T ss_dssp EECTHHHHHHHHHH---HHHHHHHTTC-SSCC--CCHHHHHHHHHHHTSCEEEEEECS-CCCBCCSSGGGHHHHHHHHHH
T ss_pred EECHHHHHHHHHHH---HHHHHhcCCC-cCCc--EEhHHHHHHHHHcCCCcEEEEEeC-CceECCCCHHHHHHHHHHHHH
Confidence 99998865442210 0001 1111 1133 445566665555533 45555543 579999999999999999886
Q ss_pred hh
Q 012172 375 LA 376 (469)
Q Consensus 375 l~ 376 (469)
+.
T Consensus 292 ~~ 293 (303)
T 3pnn_A 292 LT 293 (303)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 19
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=99.57 E-value=1e-14 Score=142.04 Aligned_cols=231 Identities=14% Similarity=0.093 Sum_probs=138.9
Q ss_pred EEEEcCCCCCcCCC---CCCccccccCCCCchHHHHHHHHHH-hhhhcCCcccEEEecCCCChHHHHHHHHHhc---CCC
Q 012172 82 VLKLNGGLGTTMGC---TGPKSVIEVRNGLTFLDLIVIQIEN-LNAKYGCNVPLLLMNSFNTHDDTSKIIEKYS---KSN 154 (469)
Q Consensus 82 vviLAGG~GTRmg~---~~PK~l~~v~~gks~L~~~~~~i~~-l~~~~~~~iplviMtS~~t~e~t~~~~~~~~---g~~ 154 (469)
+||||||+||||+. +.||.|+|+ .|||||+++++++.. .+-+ .+++.+++ .++ +.++++++. +.+
T Consensus 2 ~iIlAaG~GtRl~plt~~~PK~llpv-~gkpli~~~l~~l~~~~gi~-----~iivv~~~-~~~-~~~~~~~~~~~~~~~ 73 (255)
T 4evw_A 2 IVIPMAGMSSRFFKAGYTQPKYMLEA-HGQTLFEHSVNSFAAYFAST-----PFLFIVRN-VYD-TAVFVREKATQLGIK 73 (255)
T ss_dssp EEEECCSCCHHHHHTTCCSCGGGCEE-TTEEHHHHHHGGGGGGTTTS-----CEEEEEES-STT-HHHHHHHHHHHHTCS
T ss_pred EEEEcCCCCcccccCCCCCCccccEE-CCeEHHHHHHHHHhccCCCc-----eEEEEECc-hhh-hHHHHHHHHHHcCCC
Confidence 68999999999974 679999999 999999999999877 3322 33333455 344 556665421 111
Q ss_pred CceEEEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHH---cCCcEEEEEeCccccccccHH
Q 012172 155 VEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALIS---QGKEYVFAANSDNLGAIVDLK 231 (469)
Q Consensus 155 ~~i~~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~---~G~~~v~v~n~DNL~~~~dp~ 231 (469)
.-..++.|. .|.|+|+...... +.+.+ .+-+.++|+++|++....+..
T Consensus 74 ~~~~~~~~~------------------------~~~Gt~~av~~a~-----~~l~~~~~~~~~~~lV~~gD~l~~~~~~~ 124 (255)
T 4evw_A 74 QFYIAELHT------------------------ETRGQAETVTLGL-----EELAKQGVDYQGSITVFNIDTFRPNFVFP 124 (255)
T ss_dssp SEEEEEESS------------------------CCSSHHHHHHHHH-----HHHHHTTCCCCSCEEECCTTEECTTCCCC
T ss_pred CceEEEeCC------------------------CCCCHHHHHHHHH-----HHHhhcccCCCCcEEEEeCCEEEecchhH
Confidence 111233343 2678888754332 23321 234679999999966433311
Q ss_pred HHHHHHHcCCcceEEEeeeccCCCcceEEEEe-CC--ee-EEEEeccCChhhhhhccccccccEEEEEeEEEeHH-HHHH
Q 012172 232 ILNHLIQNKNEYCMEVTPKTLADVKGGTLISY-EG--KV-QLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLK-AIKR 306 (469)
Q Consensus 232 ~Lg~~~~~~~~~~~~v~~k~~~~~~~G~iv~~-~g--~~-~ivEy~~~~~e~~~~~~~~~~~~~~Nt~~~~~~l~-~L~~ 306 (469)
- + .++++..+.+... ..+ ++|++..+ +| ++ .++|.... -.+.|+|.|+|+.. .+.+
T Consensus 125 ~---~-~~~~~~~i~~~~~-~~p-~yG~v~~d~~g~~~V~~i~EK~~~-------------s~~~~~GiY~f~~~~~~~~ 185 (255)
T 4evw_A 125 D---I-SQHSDGYLEVFQG-GGD-NWSFAKPEHAGSTKVIQTAEKNPI-------------SDLCSTGLYHFNRKEDYLE 185 (255)
T ss_dssp G---G-GGSSSEEEEEEEC-CSS-CSCEEEESSTTCCBEEEEESSSCS-------------SSEEEEEEEEESCHHHHHH
T ss_pred H---H-hhcCCcEEEEEec-CCC-ceeEEEECCCCCeEEEEEEeccCc-------------cCcEEEeEEEECcHHHHHH
Confidence 1 1 2455655544433 334 89988875 56 66 46665221 24789999999975 3444
Q ss_pred HHHhcccccccccCCCcC--CCcceehhHHHhhhHhhhcccceeEeecCccccccCCchhHHHHHHHHHHhh
Q 012172 307 LVEADALKMEIIPNPKEV--DGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLYTLA 376 (469)
Q Consensus 307 ~l~~~~~~lp~~~n~K~~--~g~~~iqle~~~~d~~~~~~~~~~v~v~r~eF~pVKn~~dL~~~~~~~~~l~ 376 (469)
++.+ ++.+.+.. ++++ .+...+..+++.-.++.++.+++..+..|.+..||..+++.-|-++
T Consensus 186 ~l~~------~i~~~~~~~~~gE~--~ltd~i~~li~~g~~v~~~~~~~~~w~digt~~~l~~~~~~~~~~~ 249 (255)
T 4evw_A 186 AYRE------YVARPSQEWERGEL--YIAPLYNELIQKGLNIHYHLIARHEVIFCGVPDEYTDFLRQPQPLE 249 (255)
T ss_dssp HHHH------HHTSCGGGCSCSCC--CSTTHHHHHHHTTCCEEEEECCGGGCEECCSHHHHHHHHHC-----
T ss_pred HHHH------HHhcccccccCCeE--ehHHHHHHHHHCCCEEEEEEeccccEEECCCHHHHHHHHhcCCcch
Confidence 5443 12222221 2443 3344444455444456667776678999999999999987766554
No 20
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=99.54 E-value=3.4e-13 Score=131.82 Aligned_cols=233 Identities=10% Similarity=0.048 Sum_probs=147.7
Q ss_pred ceeEEEEcCCCCCcCCC---CCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCCCC
Q 012172 79 KLVVLKLNGGLGTTMGC---TGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNV 155 (469)
Q Consensus 79 k~avviLAGG~GTRmg~---~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~~~ 155 (469)
++.+||||||.||||+. ..||.|+|+ .|+||++++++++...+- -.++|.|++...+.+.+++......+.
T Consensus 24 ~m~aiIlAaG~g~Rl~~lt~~~pK~ll~i-~g~pli~~~l~~l~~~g~-----~~iivv~~~~~~~~~~~~~~~~~~~~~ 97 (269)
T 4ecm_A 24 AMKGIILAGGTGSRLYPITKVTNKHLLPV-GRYPMIYHAVYKLKQCDI-----TDIMIITGKEHMGDVVSFLGSGQEFGV 97 (269)
T ss_dssp CEEEEEECCSCCGGGTTTTSSSCGGGSEE-TTEEHHHHHHHHHHHTTC-----CEEEEEECTTTHHHHHHHHTTSGGGTC
T ss_pred CcEEEEECCCCccccccccCCCCceecEE-CCEEHHHHHHHHHHHCCC-----CEEEEECChhhHHHHHHHHhhccccCc
Confidence 57899999999999997 889999999 999999999999987641 134555555334667777753111112
Q ss_pred ceEEEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCccccccccHHHHHH
Q 012172 156 EIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVDLKILNH 235 (469)
Q Consensus 156 ~i~~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DNL~~~~dp~~Lg~ 235 (469)
++.+..|. .+.|+|+...... +.+ . .++++|+++|++....--.++..
T Consensus 98 ~i~~~~~~------------------------~~~G~~~al~~a~-----~~~-~--~~~~lv~~~D~~~~~~l~~l~~~ 145 (269)
T 4ecm_A 98 SFTYRVQD------------------------KAGGIAQALGLCE-----DFV-G--NDRMVVILGDNIFSDDIRPYVEE 145 (269)
T ss_dssp EEEEEECS------------------------SCCCHHHHHHTTH-----HHH-T--TSEEEEEETTEEESSCSHHHHHH
T ss_pred eEEEeeCC------------------------ccCcHHHHHHHHH-----Hhc-C--CCcEEEEeCCccCccCHHHHHHH
Confidence 34443332 2467777654322 222 2 47999999999444322356777
Q ss_pred HHHcCCcceEEEeeeccCCCcceEEEEeCCeeE-EEEeccCChhhhhhccccccccEEEEEeEEEeHHHHHHHHHhcccc
Q 012172 236 LIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQ-LLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALK 314 (469)
Q Consensus 236 ~~~~~~~~~~~v~~k~~~~~~~G~iv~~~g~~~-ivEy~~~~~e~~~~~~~~~~~~~~Nt~~~~~~l~~L~~~l~~~~~~ 314 (469)
+.++++++++.+.+. .++..+|++...+|++. +.|..+. ....+.|+|+|+|+.+.+ +.+.+
T Consensus 146 ~~~~~~~~~~~~~~~-~~~~~~g~v~~d~g~v~~~~ekp~~-----------~~~~~~~~Giy~~~~~~l-~~l~~---- 208 (269)
T 4ecm_A 146 FTNQKEGAKVLLQSV-DDPERFGVANIQNRKIIEIEEKPKE-----------PKSSYAVTGIYLYDSKVF-SYIKE---- 208 (269)
T ss_dssp HHTSSSSEEEEEEEC-SCGGGSEEEEEETTEEEEEEESCSS-----------CSCSEEEEEEEEECTTHH-HHHTS----
T ss_pred HHhcCCCeEEEEEEC-CCCCCceEEEEcCCEEEEEEECCCC-----------CCCcEEEEEEEEECHHHH-Hhhhh----
Confidence 776777776666544 45677898888888774 5553211 234578999999998877 44432
Q ss_pred cccccCCCcCCCcceehhHHHhhhHhhhcccceeEeecCccccccCCchhHHHHHHHHHHh
Q 012172 315 MEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLYTL 375 (469)
Q Consensus 315 lp~~~n~K~~~g~~~iqle~~~~d~~~~~~~~~~v~v~r~eF~pVKn~~dL~~~~~~~~~l 375 (469)
..+. ..++ +.+...+...+... ++.++.. ...+.-|.+..|+..++..+...
T Consensus 209 ---~~~~--~~ge--~~l~d~l~~l~~~g-~v~~~~~-~~~~~dIgt~~dl~~a~~~l~~~ 260 (269)
T 4ecm_A 209 ---LKPS--ARGE--LEITDINNWYLKRG-VLTYNEM-SGWWTDAGTHVSLQRANALARDI 260 (269)
T ss_dssp ---CCBC--TTSC--BCHHHHHHHHHHTT-CEEEEEC-CSCEEECSSHHHHHHHHHHTTTC
T ss_pred ---cCCC--CCCe--eeHHHHHHHHHHcC-CEEEEEe-CCEEEeCCCHHHHHHHHHHHHhc
Confidence 1111 1133 22333444333332 3333333 34688999999999998876543
No 21
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=99.52 E-value=5e-13 Score=131.14 Aligned_cols=233 Identities=11% Similarity=0.102 Sum_probs=146.3
Q ss_pred ceeEEEEcCCCCCcCCC---CCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCC--
Q 012172 79 KLVVLKLNGGLGTTMGC---TGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKS-- 153 (469)
Q Consensus 79 k~avviLAGG~GTRmg~---~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~-- 153 (469)
.+.+||||||.||||+. ..||.|+|+ .|+||++++++++...+-+ .++|.|++ ..+.+.++|......
T Consensus 2 ~~~avIlAaG~gtRl~plt~~~pK~ll~i-~gkpli~~~l~~l~~~gi~-----~i~vv~~~-~~~~i~~~~~~~~~l~~ 74 (281)
T 3juk_A 2 IKKCLFPAAGYGTRFLPITKTIPKEMLPI-VDKPLIQYAVEEAMEAGCE-----VMAIVTGR-NKRSLEDYFDTSYEIEH 74 (281)
T ss_dssp CCEEEEECCSCCGGGTTGGGTSCGGGCBS-SSSBHHHHHHHHHHHHTCC-----EEEEEECT-THHHHHHHTSCCC----
T ss_pred ceEEEEECCcCCcccCccccCCCcccceE-CCEEHHHHHHHHHHhCCCC-----EEEEEecC-CHHHHHHHHhcchhhhh
Confidence 35689999999999998 889999999 8999999999999886422 34555555 677787777542100
Q ss_pred -------------------CCceEEEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCc
Q 012172 154 -------------------NVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKE 214 (469)
Q Consensus 154 -------------------~~~i~~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~ 214 (469)
+..+.+..|. .|.|+|+...... +.+ +-+
T Consensus 75 ~l~~~~~~~~~~~~~~~~~~~~i~~~~~~------------------------~~~Gt~~al~~a~-----~~l---~~~ 122 (281)
T 3juk_A 75 QIQGTNKENALKSIRNIIEKCCFSYVRQK------------------------QMKGLGHAILTGE-----ALI---GNE 122 (281)
T ss_dssp ----CCHHHHHHHHHHHHHHCEEEEEECS------------------------SCCCHHHHHHHTH-----HHH---CSS
T ss_pred hhhcccchhhhhhhhccccCccEEEEecC------------------------CCCCcHHHHHHHH-----HHc---CCC
Confidence 0122222222 2678888754322 222 237
Q ss_pred EEEEEeCccccccc----c-HHHHHHHHHcCCcceEEEee-eccCCCcceEEEEe---CC--ee-EEEEeccCChhhhhh
Q 012172 215 YVFAANSDNLGAIV----D-LKILNHLIQNKNEYCMEVTP-KTLADVKGGTLISY---EG--KV-QLLEIAQVPDEHVNE 282 (469)
Q Consensus 215 ~v~v~n~DNL~~~~----d-p~~Lg~~~~~~~~~~~~v~~-k~~~~~~~G~iv~~---~g--~~-~ivEy~~~~~e~~~~ 282 (469)
+++|.++|++.... + -.++.++.+.++ ..+.+.. ...++..+|++... +| ++ .++|..+.. .
T Consensus 123 ~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~~~-~~v~~~~~~~~~~~~~g~v~~~~~~~g~~~v~~~~Ekp~~~--~--- 196 (281)
T 3juk_A 123 PFAVILADDLCISHDHPSVLKQMTSLYQKYQC-SIVAIEEVALEEVSKYGVIRGEWLEEGVYEIKDMVEKPNQE--D--- 196 (281)
T ss_dssp CEEEECTTEEEECTTSCCHHHHHHHHHHHHCS-CEEEEEECCTTTGGGSEEEEEEEEETTEEEEEEEEESCCTT--T---
T ss_pred CEEEEeCCeeccCccchHHHHHHHHHHHHcCC-CEEEEEEechhhcccCCEEEeccCCCCceEEeEEEECcCCC--C---
Confidence 89999999965543 1 245566666565 4444432 22456788988765 67 55 366644321 1
Q ss_pred ccccccccEEEEEeEEEeHHHHHHHHHhcccccccccCCCcCCCcceehhHHHhhhHhhhcccceeEeecCccccccCCc
Q 012172 283 FKSIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKAT 362 (469)
Q Consensus 283 ~~~~~~~~~~Nt~~~~~~l~~L~~~l~~~~~~lp~~~n~K~~~g~~~iqle~~~~d~~~~~~~~~~v~v~r~eF~pVKn~ 362 (469)
......|+|+|+|+.+.+ +.+.+ . .++ ..++ +.|..++..++.. .++.++..+ ..+..|.+.
T Consensus 197 ----~~~~~~~~GiYi~~~~~l-~~l~~-------~-~~~-~~~e--~~l~d~i~~l~~~-~~v~~~~~~-g~~~dIgt~ 258 (281)
T 3juk_A 197 ----APSNLAVIGRYILTPDIF-EILSE-------T-KPG-KNNE--IQITDALRTQAKR-KRIIAYQFK-GKRYDCGSV 258 (281)
T ss_dssp ----CSCSEEEEEEEEECTTHH-HHHHT-------C-CCC-GGGS--CCHHHHHHHHHHH-SCCEEEECC-SEEEETTSH
T ss_pred ----CCcceeEEEEEEECHHHH-HHHHh-------c-CCC-CCCc--eeHHHHHHHHHhc-CCEEEEEeC-CeEEcCCCH
Confidence 234578999999999776 44443 1 111 1133 3344444444443 255555554 478999999
Q ss_pred hhHHHHHHHHHH
Q 012172 363 SDLLLVQSDLYT 374 (469)
Q Consensus 363 ~dL~~~~~~~~~ 374 (469)
.|+..++..+..
T Consensus 259 ~d~~~a~~~l~~ 270 (281)
T 3juk_A 259 EGYIEASNAYYK 270 (281)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999887764
No 22
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=99.37 E-value=1.4e-11 Score=120.71 Aligned_cols=234 Identities=13% Similarity=0.131 Sum_probs=139.8
Q ss_pred cceeEEEEcCCCCCcCCCCCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCCCCce
Q 012172 78 DKLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEI 157 (469)
Q Consensus 78 ~k~avviLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~~~~i 157 (469)
+++.+||||||.||||+ +|.|+++ .||||++|.++++...+- -.+++.| .++.+.++++++. ..+
T Consensus 17 M~~~aIIlA~G~stRlp---~K~L~~i-~GkPmi~~~l~~l~~~~i-----~~IvV~t---~~~~i~~~~~~~g---~~v 81 (264)
T 3k8d_A 17 MSFVVIIPARYASTRLP---GKPLVDI-NGKPMIVHVLERARESGA-----ERIIVAT---DHEDVARAVEAAG---GEV 81 (264)
T ss_dssp -CCEEEEECCSCCSSST---TGGGCEE-TTEEHHHHHHHHHHHTTC-----SEEEEEE---SCHHHHHHHHHTT---CEE
T ss_pred CceEEEEEcCCCCCCCC---CcceeeE-CCeEHHHHHHHHHHhCCC-----CEEEEEC---CHHHHHHHHHHcC---CEE
Confidence 46899999999999995 5999999 999999999999987641 1345544 2577888877531 122
Q ss_pred EEEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCcc-ccccccH-HHHHH
Q 012172 158 HTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDN-LGAIVDL-KILNH 235 (469)
Q Consensus 158 ~~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DN-L~~~~dp-~~Lg~ 235 (469)
.+..|. .|.|+|.+..++ ..+...+.+++++.++|+ |....+. .++..
T Consensus 82 ~~~~~~------------------------~~~Gt~~i~~~~------~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~ 131 (264)
T 3k8d_A 82 CMTRAD------------------------HQSGTERLAEVV------EKCAFSDDTVIVNVQGDEPMIPATIIRQVADN 131 (264)
T ss_dssp EECCTT------------------------CCSHHHHHHHHH------HHHTCCTTCEEEEECTTCTTCCHHHHHHHHHH
T ss_pred EEecCC------------------------CCCCHHHHHHHH------HHhccCCCCEEEEEcCCcccCCHHHHHHHHHH
Confidence 211121 357777754432 222212568999999999 7765443 44555
Q ss_pred HHHcCCcceEEEeeecc-----CCCcceEEEEeCCeeEEEEeccCChhhhhhcc----ccccccEEEEEeEEEeHHHHHH
Q 012172 236 LIQNKNEYCMEVTPKTL-----ADVKGGTLISYEGKVQLLEIAQVPDEHVNEFK----SIEKFKIFNTNNLWVNLKAIKR 306 (469)
Q Consensus 236 ~~~~~~~~~~~v~~k~~-----~~~~~G~iv~~~g~~~ivEy~~~~~e~~~~~~----~~~~~~~~Nt~~~~~~l~~L~~ 306 (469)
+.+.++++++-+++-.+ ++.-+++++..+|+..-.+.+-.|. ..+.+. ......+.|+|.|+++.++|++
T Consensus 132 ~~~~~~~~~~~~~~v~d~~~~~~p~~vkVv~d~~g~~l~fsr~~ip~-~r~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~ 210 (264)
T 3k8d_A 132 LAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPW-DRDRFAEGLETVGDNFLRHLGIYGYRAGFIRR 210 (264)
T ss_dssp HHTSSCSEEEEEEECCSHHHHTCTTSCEEEECTTSBEEEEESSCCSC-CHHHHHHCSSCCCSCCEEECSEEEEEHHHHHH
T ss_pred HhhcCCCEEEEEEEcCCHHHccCCCceEEEECCCCeEEEEecCCCCC-CCccccccccccCCcceEEEEEEEECHHHHHH
Confidence 55556676665554332 2334456655677653222232321 111110 0012246799999999999998
Q ss_pred HHHhcccccccccCCCcCCCcc--eehhHHHhhhHhhhcccceeEeecCccccccCCchhHHHHHHHH
Q 012172 307 LVEADALKMEIIPNPKEVDGIK--VLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDL 372 (469)
Q Consensus 307 ~l~~~~~~lp~~~n~K~~~g~~--~iqle~~~~d~~~~~~~~~~v~v~r~eF~pVKn~~dL~~~~~~~ 372 (469)
.... .+++. .=+||..- ++....++.++.+...++.+|.++.||..|++.+
T Consensus 211 ~~~~-------------~~~~lE~~e~leqlr--~le~G~~I~~~~~~~~~~~~IdtpeDl~~a~~~l 263 (264)
T 3k8d_A 211 YVNW-------------QPSPLEHIEMLEQLR--VLWYGEKIHVAVAQEVPGTGVDTPEDLERVRAEM 263 (264)
T ss_dssp HHHS-------------CCCHHHHHHTCTTHH--HHHTTCCEEEEECSCCCSCCCCSHHHHHHHHHHC
T ss_pred HHhC-------------CCChhhhHHHHHHHH--HHHCCCceEEEEeCCCCCCCCCCHHHHHHHHHHh
Confidence 8642 01211 00112111 2233334445555556889999999999998754
No 23
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=99.35 E-value=5.5e-11 Score=117.96 Aligned_cols=234 Identities=16% Similarity=0.131 Sum_probs=140.7
Q ss_pred ceeEEEEcCCCCCcCC---CCCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCCCC
Q 012172 79 KLVVLKLNGGLGTTMG---CTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNV 155 (469)
Q Consensus 79 k~avviLAGG~GTRmg---~~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~~~ 155 (469)
++.+||||||.||||+ ...||.|+|+ .||||+++.++.+...+- + .++|.|+....+.+++++......+.
T Consensus 2 ~~~aIILAgG~gtRl~plT~~~pK~llpi-~gkpli~~~l~~l~~~gi----~-~I~vv~~~~~~~~i~~~l~~g~~~g~ 75 (293)
T 1fxo_A 2 KRKGIILAGGSGTRLHPATLAISKQLLPV-YDKPMIYYPLSTLMLAGI----R-EILIISTPQDTPRFQQLLGDGSNWGL 75 (293)
T ss_dssp CEEEEEECCCCCTTTTTHHHHSCGGGSEE-TTEETTHHHHHHHHHTTC----C-EEEEEECTTTHHHHHHHHTTSGGGTC
T ss_pred CceEEEECCCCCCcCccccCCCCceeCeE-CCEeHHHHHHHHHHHCCC----C-EEEEEeccccHHHHHHHHhcccccCc
Confidence 4678999999999999 4679999999 999999999999976531 1 34444445456777777754110112
Q ss_pred ceEEEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCcc-cccccc-HHHH
Q 012172 156 EIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDN-LGAIVD-LKIL 233 (469)
Q Consensus 156 ~i~~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DN-L~~~~d-p~~L 233 (469)
++.+..|. .|.|.++.+.... + ++ +-+.+++.++|| +.. .+ ..++
T Consensus 76 ~i~~~~~~------------------------~~~G~~~al~~a~-----~-~i--~~~~~~lv~gD~~~~~-~~l~~~l 122 (293)
T 1fxo_A 76 DLQYAVQP------------------------SPDGLAQAFLIGE-----S-FI--GNDLSALVLGDNLYYG-HDFHELL 122 (293)
T ss_dssp EEEEEECS------------------------SCCCGGGHHHHTH-----H-HH--TTSEEEEEETTEEEEC-TTHHHHH
T ss_pred eEEEeeCC------------------------CCCCHHHHHHHHH-----H-Hh--CCCCEEEEECChhccC-ccHHHHH
Confidence 34433333 2578887654322 2 22 225667777999 544 34 2455
Q ss_pred HHHHHcCCcceEEEeeeccCCCcceEEEEe-CCee-EEEEeccCChhhhhhccccccccEEEEEeEEEeHHHHHHHHHhc
Q 012172 234 NHLIQNKNEYCMEVTPKTLADVKGGTLISY-EGKV-QLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEAD 311 (469)
Q Consensus 234 g~~~~~~~~~~~~v~~k~~~~~~~G~iv~~-~g~~-~ivEy~~~~~e~~~~~~~~~~~~~~Nt~~~~~~l~~L~~~l~~~ 311 (469)
..+.+.+.+..+-+. +..++.++|++..+ +|++ .+.|..+. ..-.+.|+|.++|+.+.+..+-.
T Consensus 123 ~~~~~~~~~~~v~~~-~v~dp~~~g~v~~d~~g~v~~~~ekp~~-----------~~s~~~~~Giy~~~~~~l~~~~~-- 188 (293)
T 1fxo_A 123 GSASQRQTGASVFAY-HVLDPERYGVVEFDQGGKAISLEEKPLE-----------PKSNYAVTGLYFYDQQVVDIARD-- 188 (293)
T ss_dssp HHHHTCCSSEEEEEE-ECSCGGGSEEEEECTTSCEEEEEESCSS-----------CSSSEEEEEEEEECTTHHHHHHH--
T ss_pred HHHHhcCCCcEEEEE-ECCCcccCcEEEECCCCcEEEEEECCCC-----------CCCCeEEEEEEEEcHHHHHHHHh--
Confidence 555545555555444 34456789988654 5776 35553111 12247899999999988755432
Q ss_pred ccccccccCCCcCCCcceehhHHHhhhHhhhcccceeEeecCc-cccccCCchhHHHHHHHHHHhh
Q 012172 312 ALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRS-RFLPVKATSDLLLVQSDLYTLA 376 (469)
Q Consensus 312 ~~~lp~~~n~K~~~g~~~iqle~~~~d~~~~~~~~~~v~v~r~-eF~pVKn~~dL~~~~~~~~~l~ 376 (469)
+.. . ..++ +.+...+...++. ....+..+++. .+.-|.+.+||..++..+..++
T Consensus 189 ------~~~-~-~~ge--~~~td~~~~~l~~-g~~~v~~~~~g~~w~Digt~edl~~a~~~~~~~~ 243 (293)
T 1fxo_A 189 ------LKP-S-PRGE--LEITDVNRAYLER-GQLSVEIMGRGYAWLDTGTHDSLLEAGQFIATLE 243 (293)
T ss_dssp ------CCC-C-TTSS--CCHHHHHHHHHHT-TCEEEEECCTTSEEEECCSHHHHHHHHHHHHHHH
T ss_pred ------cCc-c-cCCc--eeHHHHHHHHHhc-CCeEEEEeCCCCEEEcCCCHHHHHHHHHHHHHHH
Confidence 110 0 0132 2222222222222 12334445665 6899999999999988776544
No 24
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=99.35 E-value=1.4e-11 Score=122.40 Aligned_cols=243 Identities=13% Similarity=0.095 Sum_probs=142.9
Q ss_pred eeEEEEcCCCCCcCC---CCCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCCCCc
Q 012172 80 LVVLKLNGGLGTTMG---CTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVE 156 (469)
Q Consensus 80 ~avviLAGG~GTRmg---~~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~~~~ 156 (469)
+.+||||||.||||+ ...||.|+|+ .|+||+++.++.+...+- + .++|.|+....+.+++++......+.+
T Consensus 4 m~aIILAgG~GtRl~plT~~~pK~llpi-~gkpli~~~l~~l~~~gi----~-~I~vv~~~~~~~~i~~~l~~g~~~g~~ 77 (296)
T 1mc3_A 4 MKGIILAGGSGTRLHPITRGVSKQLLPI-YDKPMIYYPLSVLMLAGI----R-EILIITTPEDKGYFQRLLGDGSEFGIQ 77 (296)
T ss_dssp CEEEEECCCCCGGGHHHHTTSCGGGSEE-TTEETTHHHHHHHHHTTC----C-EEEEEECTTTHHHHHHHHTTSGGGTCE
T ss_pred cEEEEECCCCCCcCCcccCCCCceeeEE-CCeeHHHHHHHHHHhCCC----C-cEEEEechhHHHHHHHHHhcccccCce
Confidence 568999999999999 6789999999 899999999999976431 1 344445544567777777541101123
Q ss_pred eEEEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCcc-ccccccHHHHHH
Q 012172 157 IHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDN-LGAIVDLKILNH 235 (469)
Q Consensus 157 i~~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DN-L~~~~dp~~Lg~ 235 (469)
+.+..|. .|.|+++.+.... + ++. -+.+++.++|| +....-..++..
T Consensus 78 i~~~~~~------------------------~~~G~~~al~~a~-----~-~i~--~~~~~lv~gD~~~~~~~l~~~l~~ 125 (296)
T 1mc3_A 78 LEYAEQP------------------------SPDGLAQAFIIGE-----T-FLN--GEPSCLVLGDNIFFGQGFSPKLRH 125 (296)
T ss_dssp EEEEECS------------------------SCCCSTHHHHHTH-----H-HHT--TSCEEEEETTEEEECSSCHHHHHH
T ss_pred EEEeccC------------------------CCCCHHHHHHHHH-----H-HhC--CCCEEEEECCccccccCHHHHHHH
Confidence 4433333 2577877653321 2 222 24455555999 544222345555
Q ss_pred HHHcCCcceEEEeeeccCCCcceEEEEe-CCeeE-EEEeccCChhhhhhccccccccEEEEEeEEEeHHHHHHHHHhccc
Q 012172 236 LIQNKNEYCMEVTPKTLADVKGGTLISY-EGKVQ-LLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADAL 313 (469)
Q Consensus 236 ~~~~~~~~~~~v~~k~~~~~~~G~iv~~-~g~~~-ivEy~~~~~e~~~~~~~~~~~~~~Nt~~~~~~l~~L~~~l~~~~~ 313 (469)
+.+.+.+..+-+. +..+++++|++..+ +|++. +.| + |.. ....+.|+|.++++.+.+..+ .+
T Consensus 126 ~~~~~~~~~v~~~-~v~dp~~yg~v~~d~~g~v~~~~e-k--p~~--------~~s~~~~~Giy~~~~~~l~~~-~~--- 189 (296)
T 1mc3_A 126 VAARTEGATVFGY-QVMDPERFGVVEFDDNFRAISLEE-K--PKQ--------PKSNWAVTGLYFYDSKVVEYA-KQ--- 189 (296)
T ss_dssp HTTCCSSEEEEEE-ECSCCSSSBBCEEETTEEEEECCB-S--CSS--------CSCSEEEEEEEECCTHHHHHH-HS---
T ss_pred HHHcCCCCEEEEE-ECCCcccCCEEEECCCCcEEEEEE-C--CCC--------CCCCEEEEEEEEEcHHHHHHH-Hh---
Confidence 5444555544333 34556789987654 56553 333 2 211 123478999999999887543 22
Q ss_pred ccccccCCCcCCCcceehhHHHhhhHhhhcccceeEeecCc-cccccCCchhHHHHHHHHHHhhc--CceeecCC
Q 012172 314 KMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRS-RFLPVKATSDLLLVQSDLYTLAD--GFVTRNEA 385 (469)
Q Consensus 314 ~lp~~~n~K~~~g~~~iqle~~~~d~~~~~~~~~~v~v~r~-eF~pVKn~~dL~~~~~~~~~l~~--g~l~~~~~ 385 (469)
+.. . ..++. .+...+...++. ....+..+++. .+.-|.+.+||..++..+..+++ |..+..|+
T Consensus 190 ----~~~-~-~~ge~--~~td~~~~~l~~-g~~~v~~~~~g~~w~Digt~edl~~a~~~~~~~~~~~g~~~~~~~ 255 (296)
T 1mc3_A 190 ----VKP-S-ERGEL--EITSINQMYLEA-GNLTVELLGRGFAWLDTGTHDSLIEASTFVQTVEKRQGFKIACLE 255 (296)
T ss_dssp ----CCC-C-SSSSC--CHHHHHHHHHHT-TCEEEEECCTTCEEEECCSHHHHHHHHHHHHHHHHHHSCCSSCHH
T ss_pred ----cCc-c-ccCCc--cHHHHHHHHHhc-CCeEEEEeCCCCEEEeCCCHHHHHHHHHHHHHHHHhCCceEeehH
Confidence 111 0 11332 223333322322 12344456666 69999999999999888775442 55555554
No 25
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=99.34 E-value=9.4e-12 Score=120.00 Aligned_cols=237 Identities=14% Similarity=0.139 Sum_probs=136.2
Q ss_pred ceeEEEEcCCCCCcCCC---CCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCCCC
Q 012172 79 KLVVLKLNGGLGTTMGC---TGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNV 155 (469)
Q Consensus 79 k~avviLAGG~GTRmg~---~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~~~ 155 (469)
++.+||||||.||||+. +.||.|+|+ .|+|+++++++++.+.+- -.++|.|++ .++.+++++.++.....
T Consensus 2 ~~~avIlAaG~gtRl~~lt~~~pK~l~~i-~gkpli~~~l~~l~~~g~-----~~i~vv~~~-~~~~i~~~~~~~~~~~~ 74 (259)
T 1tzf_A 2 ASKAVILAGGLGTRLSEETIVKPKPMVEI-GGKPILWHIMKMYSVHGI-----KDFIICCGY-KGYVIKEYFANYFLHMS 74 (259)
T ss_dssp CCEEEEEECSCC--------CCCGGGCEE-TTEEHHHHHHHHHHHTTC-----CEEEEEECT-THHHHHHHHHTHHHHHS
T ss_pred CcEEEEECCCCcccCCCccCCCCccccEE-CCEEHHHHHHHHHHHCCC-----CEEEEEccc-CHHHHHHHHhhcccccc
Confidence 35689999999999997 679999999 999999999999987641 245666666 56888888875321001
Q ss_pred ceEEEEecCcceecCCCCcccCCCC-CCCCc----ccccCCCcccchhccccchHHHHHHcCCcEEEEEeCcccccccc-
Q 012172 156 EIHTFNQSQYPRLCADDFVPLPCKG-KTDKD----GWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVD- 229 (469)
Q Consensus 156 ~i~~f~Q~~~P~l~~~~~~~~~~~~-~~~~~----~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DNL~~~~d- 229 (469)
++.+..|+. .+ -+..+. .++.+ ...+.|+|+.+..... .+ . +.+++++.++|++.. .+
T Consensus 75 ~~~~~~~~~--~~------~~~~~~~~~~~v~~~~~~~~~gt~~al~~a~~-----~~-~-~~~~~lv~~~D~~~~-~~~ 138 (259)
T 1tzf_A 75 DVTFHMAEN--RM------EVHHKRVEPWNVTLVDTGDSSMTGGRLKRVAE-----YV-K-DDEAFLFTYGDGVAD-LDI 138 (259)
T ss_dssp CEEEEGGGT--EE------EETTCCCCCCEEEEEECCSSCCHHHHHHHTGG-----GT-T-TSSCEEEEETTEEEC-CCH
T ss_pred ccccccccc--ce------eeeeccccccceeeeecccccCcHHHHHHHHH-----hc-C-CCCcEEEEECCEecc-cCH
Confidence 244433321 00 000000 00100 1236788887544332 11 1 237899999999644 34
Q ss_pred HHHHHHHHHcCCcceEEEeeeccCCCcceEEEEeCCee-EEEEeccCChhhhhhccccccccEEEEEeEEEeHHHHHHHH
Q 012172 230 LKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKV-QLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLV 308 (469)
Q Consensus 230 p~~Lg~~~~~~~~~~~~v~~k~~~~~~~G~iv~~~g~~-~ivEy~~~~~e~~~~~~~~~~~~~~Nt~~~~~~l~~L~~~l 308 (469)
-.++.++.+.++++.+..+ .++..+|++...+|++ .++|.. .+ .....|+|+|+|+.+.+. .
T Consensus 139 ~~~~~~~~~~~~~~t~~~~---~~~~~~g~v~~~~g~v~~~~ekp-~~-----------~~~~~~~Giy~~~~~~l~-~- 201 (259)
T 1tzf_A 139 KATIDFHKAHGKKATLTAT---FPPGRFGALDIQAGQVRSFQEKP-KG-----------DGAMINGGFFVLNPSVID-L- 201 (259)
T ss_dssp HHHHHHHHHHCCSEEEEEE---CCCCCSEEEEEETTEEEEEEESC-SC-----------CSCCEECCCEEECGGGGG-G-
T ss_pred HHHHHHHHHhCCeEEEEEe---cCCCCccEEEEcCCEEEEEEecC-CC-----------CCceEEEEEEEeCHHHHH-h-
Confidence 2556666666666544222 3456789777667876 366621 11 124689999999998762 1
Q ss_pred HhcccccccccCCCcCCCcceehhH-HHhhhHhhhcccceeEeecCccccccCCchhHHHHHHHHH
Q 012172 309 EADALKMEIIPNPKEVDGIKVLQLE-TAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLY 373 (469)
Q Consensus 309 ~~~~~~lp~~~n~K~~~g~~~iqle-~~~~d~~~~~~~~~~v~v~r~eF~pVKn~~dL~~~~~~~~ 373 (469)
+.+.+ . .++ ..+..+++. .++.++.++ ..+.-|.+.+|+..++..+.
T Consensus 202 ---------l~~~~---~----~~~~~~i~~~~~~-~~v~~~~~~-~~~~dI~t~~d~~~a~~~~~ 249 (259)
T 1tzf_A 202 ---------IDNDA---T----TWEQEPLMTLAQQ-GELMAFEHP-GFWQPMDTLRDKVYLEGLWE 249 (259)
T ss_dssp ---------CCSTT---C----CTTTHHHHHHHHT-TCEEEEEEC-SCEEECCSHHHHHHHHHHHH
T ss_pred ---------hcccc---c----ccHHHHHHHHHHc-CCEEEEEeC-cEEEeCCCHHHHHHHHHHHh
Confidence 11111 0 111 112222222 244555554 37889999999999887764
No 26
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=99.33 E-value=4.2e-11 Score=116.74 Aligned_cols=232 Identities=12% Similarity=0.078 Sum_probs=135.4
Q ss_pred cceeEEEEcCCCCCcCCCCCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCCCCce
Q 012172 78 DKLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEI 157 (469)
Q Consensus 78 ~k~avviLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~~~~i 157 (469)
.++.+||||||.||||+ ||.|+++ .||||++|.++++.+.+-. .+++-|. ++.+.++++++ | .++
T Consensus 8 M~~~aIIlA~G~stRl~---~K~L~~i-~GkPli~~~l~~l~~~~i~-----~VvVvt~---~~~i~~~~~~~-g--~~v 72 (256)
T 3tqd_A 8 MEFRVIIPARFDSTRLP---GKALVDI-AGKPMIQHVYESAIKSGAE-----EVVIATD---DKRIRQVAEDF-G--AVV 72 (256)
T ss_dssp -CCEEEEECCCC---CT---TGGGCEE-TTEEHHHHHHHHHHHTTCS-----EEEEEES---CHHHHHHHHHT-T--CEE
T ss_pred CCceEEEEcCCCCCCCC---CCCeeeE-CCchHHHHHHHHHHhCCCC-----EEEEECC---HHHHHHHHHHc-C--CeE
Confidence 47899999999999997 9999999 9999999999999875311 3344442 57788888753 1 122
Q ss_pred EEEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCcc-ccccccH-HHHHH
Q 012172 158 HTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDN-LGAIVDL-KILNH 235 (469)
Q Consensus 158 ~~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DN-L~~~~dp-~~Lg~ 235 (469)
.+..| ..|.|++.++.++ +.+...+.++++++++|+ |....+. .++..
T Consensus 73 ~~~~~------------------------~~~~Gt~~i~~a~------~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~ 122 (256)
T 3tqd_A 73 CMTSS------------------------DHQSGTERIAEAA------VALGFEDDEIIVCLQGDEPLIPPDAIRKLAED 122 (256)
T ss_dssp EECCT------------------------TCCSHHHHHHHHH------HHTTCCTTCEEEEECTTCCCCCHHHHHHHHHH
T ss_pred EEeCC------------------------CCCCcHHHHHHHH------HHhCcCCCCEEEEEeCCcccCCHHHHHHHHHH
Confidence 21111 1256777654433 222112468999999999 7755443 34455
Q ss_pred HHHc-CCcceEEEeeec-----cCCCcceEEEEeCCeeEEEEeccCChhhhhhcc-----ccccccEEEEEeEEEeHHHH
Q 012172 236 LIQN-KNEYCMEVTPKT-----LADVKGGTLISYEGKVQLLEIAQVPDEHVNEFK-----SIEKFKIFNTNNLWVNLKAI 304 (469)
Q Consensus 236 ~~~~-~~~~~~~v~~k~-----~~~~~~G~iv~~~g~~~ivEy~~~~~e~~~~~~-----~~~~~~~~Nt~~~~~~l~~L 304 (469)
+.+. +++++.-+++-. .++..+++++..+|+..-.+.+-+|... +.+. ......+.|+|+|.++.++|
T Consensus 123 ~~~~~~~~~a~l~~~v~~~~~~~~p~~vkvv~d~~g~~l~fsr~pip~~r-~~~~~~~~~~~~~~~~~~~GiY~y~~~~l 201 (256)
T 3tqd_A 123 LDEHDNVKVASLCTPITEVDELFNPHSTKVVLNRRNYALYFSHAPIPWGR-DTFSDKENLQLNGSHYRHVGIYAYRVGFL 201 (256)
T ss_dssp HHHCC--CEEEEEEECCCHHHHTCTTSCEEEECTTSBEEEEESSCSSCCT-TTTTCGGGCCCSSCCEEEEEEEEEEHHHH
T ss_pred HHhCCCCCEEEEeeEcCCHHHhhCCCccEEEECCCCEEeEEecCCCCCCC-cccccccccccCCcceEEEEEEEcCHHHH
Confidence 5443 445544444321 3455567777677876433333333110 0000 00112366999999999999
Q ss_pred HHHHHhcccccccccCCCcCCCcc--eehhHHHhhhHhhhcccceeEeecCccccccCCchhHHHHHH
Q 012172 305 KRLVEADALKMEIIPNPKEVDGIK--VLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQS 370 (469)
Q Consensus 305 ~~~l~~~~~~lp~~~n~K~~~g~~--~iqle~~~~d~~~~~~~~~~v~v~r~eF~pVKn~~dL~~~~~ 370 (469)
+++.... +++. .=+||+. .++..-.++.++.++...+.+|.+.+||..+++
T Consensus 202 ~~~~~l~-------------~s~lE~~e~leql--r~le~G~~i~~~~~~~~~~~~idtpeDl~~a~~ 254 (256)
T 3tqd_A 202 EEYLSWD-------------ACPAEKMEALEQL--RILWHGGRIHMVVAKSKCPPGVDTEEDLERVRA 254 (256)
T ss_dssp HHHHHSC-------------CCHHHHHHTCTTH--HHHHTTCCCEEEECSSCCCCCCSSHHHHHHHHT
T ss_pred HHHHhCC-------------CCcccchhhhHHH--HHHHCCCeEEEEEeCCCCCCCcCCHHHHHHHHH
Confidence 9876421 1110 0011211 123344456666776667899999999998864
No 27
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=99.33 E-value=9.9e-11 Score=116.30 Aligned_cols=242 Identities=16% Similarity=0.109 Sum_probs=143.0
Q ss_pred eeEEEEcCCCCCcCC---CCCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCCCCc
Q 012172 80 LVVLKLNGGLGTTMG---CTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVE 156 (469)
Q Consensus 80 ~avviLAGG~GTRmg---~~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~~~~ 156 (469)
+.+||||||.||||+ ...||.|+|+ .||||+++.++.+...+- + .++|.|+....+.+++++......+.+
T Consensus 4 m~aIILAgG~GtRl~plT~~~pK~llpi-~gkpli~~~l~~l~~~gi----~-~Iivv~~~~~~~~i~~~l~~g~~~g~~ 77 (295)
T 1lvw_A 4 MKGIVLAGGSGTRLYPITRAVSKQLLPI-YDKPMIYYPLSVLMLAGI----R-DILIISTPRDLPLYRDLLGDGSQFGVR 77 (295)
T ss_dssp CEEEEECCCCCSTTTTTTTSSCGGGSEE-TTEETTHHHHHHHHHTTC----C-EEEEEECTTTHHHHHHHHTTSGGGTSE
T ss_pred eEEEEECCCCCCccccccCCCCceecEE-CCeeHHHHHHHHHHHCCC----C-eEEEEeccchHHHHHHHhhhccccCce
Confidence 568999999999999 5779999999 899999999999986531 1 344445544567777777541101123
Q ss_pred eEEEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCcc-cccccc-HHHHH
Q 012172 157 IHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDN-LGAIVD-LKILN 234 (469)
Q Consensus 157 i~~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DN-L~~~~d-p~~Lg 234 (469)
+.+..|. .|.|.++.+.... + ++. -+.+++.++|| +.. .+ ..++.
T Consensus 78 i~~~~~~------------------------~~~G~~~al~~a~-----~-~i~--~~~~~lv~gD~~~~~-~~l~~~l~ 124 (295)
T 1lvw_A 78 FSYRVQE------------------------EPRGIADAFIVGK-----D-FIG--DSKVALVLGDNVFYG-HRFSEILR 124 (295)
T ss_dssp EEEEECS------------------------SCCCGGGHHHHTH-----H-HHT--TSCEEEEETTCCEEC-TTHHHHHH
T ss_pred EEEeeCC------------------------CCCChHHHHHHHH-----H-HhC--CCcEEEEECCccccC-cCHHHHHH
Confidence 4433333 2567887654322 2 222 24455555999 544 34 24555
Q ss_pred HHHHcCCcceEEEeeeccCCCcceEEEEe-CCeeE-EEEeccCChhhhhhccccccccEEEEEeEEEeHHHHHHHHHhcc
Q 012172 235 HLIQNKNEYCMEVTPKTLADVKGGTLISY-EGKVQ-LLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADA 312 (469)
Q Consensus 235 ~~~~~~~~~~~~v~~k~~~~~~~G~iv~~-~g~~~-ivEy~~~~~e~~~~~~~~~~~~~~Nt~~~~~~l~~L~~~l~~~~ 312 (469)
.+.+.+.+..+-+.+ ..+++++|++..+ +|++. +.|..+.+ .-.+.|+|.++|+.+.+..+-.
T Consensus 125 ~~~~~~~~~~v~~~~-v~dp~~~g~v~~d~~g~v~~~~ekp~~~-----------~s~~~~~Giy~f~~~~l~~~~~--- 189 (295)
T 1lvw_A 125 RAASLEDGAVIFGYY-VRDPRPFGVVEFDSEGRVISIEEKPSRP-----------KSNYVVPGLYFYDNQVVEIARR--- 189 (295)
T ss_dssp HHHTCCSSEEEEEEE-CSCCTTSEEEEECTTSBEEEEEESCSSC-----------SCSEECCSEEEECTTHHHHHHH---
T ss_pred HHHHcCCCcEEEEEE-CCCcccCCEEEECCCCcEEEEEECCCCC-----------CCCEEEEEeEEEcHHHHHHHHh---
Confidence 555445555443333 3456689987654 57763 55532111 1247899999999988755432
Q ss_pred cccccccCCCcCCCcceehhHHHhhhHhhhcccceeEeecCc-cccccCCchhHHHHHHHHHHhhc--CceeecCC
Q 012172 313 LKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRS-RFLPVKATSDLLLVQSDLYTLAD--GFVTRNEA 385 (469)
Q Consensus 313 ~~lp~~~n~K~~~g~~~iqle~~~~d~~~~~~~~~~v~v~r~-eF~pVKn~~dL~~~~~~~~~l~~--g~l~~~~~ 385 (469)
+.. . ..++. .+...+...+.. .+..+..+++. .+.-|.+.+||..++..+..++. |.....|+
T Consensus 190 -----~~~-~-~~ge~--~~td~~~~~l~~-g~~~v~~~~~g~~w~Digt~edl~~a~~~~~~~~~~~g~~~~~~~ 255 (295)
T 1lvw_A 190 -----IEP-S-DRGEL--EITSVNEEYLRM-GKLRVELMGRGMAWLDTGTHDGLLEASSFIETIQKRQGFYIACLE 255 (295)
T ss_dssp -----CCC-C-TTSCC--CHHHHHHHHHHT-TCEEEEEECTTCEECCCSSHHHHHHHHHHHHHHHHHHCCCSSCHH
T ss_pred -----cCC-c-ccCce--eHHHHHHHHHHc-CCcEEEEeCCCCeEEeCCCHHHHHHHHHHHHHHHHhCCceecchh
Confidence 111 0 11322 222222222222 12344556776 69999999999999888775542 54444443
No 28
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=99.32 E-value=1.9e-11 Score=118.93 Aligned_cols=232 Identities=10% Similarity=0.025 Sum_probs=133.6
Q ss_pred eeEEEEcCCCCCcCCCCCCccccccCCCCchHHHHH-HHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCCCCceE
Q 012172 80 LVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIV-IQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIH 158 (469)
Q Consensus 80 ~avviLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~-~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~~~~i~ 158 (469)
..+||||||.||||+ +|.|+++ .||||++|++ +++++.+ . -.+++-|. ++.+.++++++ | .++.
T Consensus 2 ~~aiIlA~G~stR~~---~K~L~~i-~GkPli~~~i~~~~~~~~----~-~~vvVvt~---~~~i~~~~~~~-g--~~v~ 66 (253)
T 4fcu_A 2 KHIVIPARFSSSRLP---GKPLLLI-HDRPMILRVVDQAKKVEG----F-DDLCVATD---DERIAEICRAE-G--VDVV 66 (253)
T ss_dssp EEEEEECCSCCTTST---TGGGSEE-TTEEHHHHHHHHHHTCTT----C-CEEEEEES---CHHHHHHHHTT-T--CCEE
T ss_pred eEEEEEeCCCCCCCC---CCceeeE-CCeEhHHHHHHHHHHhcC----C-CEEEEECC---HHHHHHHHHHc-C--CeEE
Confidence 468999999999998 5999999 9999999999 9886542 1 13445443 47787777653 1 1222
Q ss_pred EEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCcc-ccccccH-HHHHHH
Q 012172 159 TFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDN-LGAIVDL-KILNHL 236 (469)
Q Consensus 159 ~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DN-L~~~~dp-~~Lg~~ 236 (469)
+..|. .+.|++-+..+ +..+...+.++++++++|+ |....+. .++..+
T Consensus 67 ~~~~~------------------------~~~Gt~~i~~a------~~~~~~~~~d~vlv~~gD~Pli~~~~i~~li~~~ 116 (253)
T 4fcu_A 67 LTSAD------------------------HPSGTDRLSEV------ARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLL 116 (253)
T ss_dssp ECCTT------------------------CCCHHHHHHHH------HHHHTCCTTCEEEECCTTCTTCCHHHHHHHHHHH
T ss_pred EeCCC------------------------CCChHHHHHHH------HHhcCcCCCCEEEEEeCCcccCCHHHHHHHHHHH
Confidence 11111 13454333222 2233222458999999999 8765443 344555
Q ss_pred HHc-CCcceEEEee-----eccCCCcceEEEEeCCeeEEEEeccCChhhhhhccc---c-ccccEEEEEeEEEeHHHHHH
Q 012172 237 IQN-KNEYCMEVTP-----KTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKS---I-EKFKIFNTNNLWVNLKAIKR 306 (469)
Q Consensus 237 ~~~-~~~~~~~v~~-----k~~~~~~~G~iv~~~g~~~ivEy~~~~~e~~~~~~~---~-~~~~~~Nt~~~~~~l~~L~~ 306 (469)
.+. +..++..+++ ...++..+++++..+|+..-...+-+|... +.+.. . ....+.|+|+|+|+.++|++
T Consensus 117 ~~~~~~~~at~~~~~~~~~~~~~p~~~kvv~d~~g~~l~fsr~~ip~~r-~~~~~~~~~~~~~~~~~~GiY~f~~~~l~~ 195 (253)
T 4fcu_A 117 VDKPNCSMSTLCEPIHALDEFQRDSIVKVVMSKQNEALYFSRATIPYDR-DGAKRDEPTLHTQAFRHLGLYAYRVSLLQE 195 (253)
T ss_dssp HHCTTCSEEEEEEECCCHHHHHCTTSCEEEECTTSBEEEEESSCCSCCT-TTSSSSSCCCCSCCEEEEEEEEEEHHHHHH
T ss_pred HhCCCCCEEEEeEEcCCHHHccCCCccEEEECCCCeEEEecCCCCCCCC-CcccccccccccceeEEEEEEEeCHHHHHH
Confidence 444 2344433343 124555567766667876322222233211 11100 0 11235699999999999998
Q ss_pred HHHhcccccccccCCCcCCCcce--ehhHHHhhhHhhhcccceeEeecCccccccCCchhHHHHHHHH
Q 012172 307 LVEADALKMEIIPNPKEVDGIKV--LQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDL 372 (469)
Q Consensus 307 ~l~~~~~~lp~~~n~K~~~g~~~--iqle~~~~d~~~~~~~~~~v~v~r~eF~pVKn~~dL~~~~~~~ 372 (469)
.... .+++.. =.||..- ++....++.++.++..++.+|+++.||..+++.+
T Consensus 196 ~~~~-------------~~~~le~~e~le~lr--~l~~G~~I~~~~~~~~~~~~IdtpeDL~~a~~~l 248 (253)
T 4fcu_A 196 YVTW-------------EMGKLEKLESLEQLR--VLENGHRIAIAVAEANLPPGVDTQADLDRLNNMP 248 (253)
T ss_dssp HTTS-------------CCCHHHHHHTCTTHH--HHHTTCCEEEEECSSCCCCCCCSHHHHHHHHTSC
T ss_pred HHhC-------------CCCcccchhHHHHHH--HHHCCCceEEEEeCCCCCCCCCCHHHHHHHHHHH
Confidence 7521 113210 0112111 1333345666677655689999999999998654
No 29
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=99.31 E-value=2.2e-10 Score=109.54 Aligned_cols=229 Identities=6% Similarity=0.018 Sum_probs=133.2
Q ss_pred ceeEEEEcCCCCCcCCCCCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCCCCceE
Q 012172 79 KLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIH 158 (469)
Q Consensus 79 k~avviLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~~~~i~ 158 (469)
++.+||||||.||||+ ||.|+++ .|+||++|+++++..... --.+++.|++ +.+.++++++ .+.
T Consensus 2 ~~~aiIlA~G~~~R~~---~K~l~~i-~g~pli~~~i~~~~~~~~----~~~ivvv~~~---~~i~~~~~~~-----~~~ 65 (245)
T 1h7e_A 2 KAVIVIPARYGSSRLP---GKPLLDI-VGKPMIQHVYERALQVAG----VAEVWVATDD---PRVEQAVQAF-----GGK 65 (245)
T ss_dssp CEEEEEECCSCCSSST---TGGGCEE-TTEEHHHHHHHHHHTCTT----CCEEEEEESC---HHHHHHHHHT-----TCE
T ss_pred CeEEEEEcCCcCCCCC---CCccccc-CCchHHHHHHHHHHhCCC----CCeEEEECCc---HHHHHHHHHc-----CCe
Confidence 5788999999999997 9999999 999999999999987642 0145555543 6777777653 133
Q ss_pred EEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCcc-ccccccH-HHHHHH
Q 012172 159 TFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDN-LGAIVDL-KILNHL 236 (469)
Q Consensus 159 ~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DN-L~~~~dp-~~Lg~~ 236 (469)
++.-. ...+.|+++++.++ ...+.++++++++|+ +....+. .++..+
T Consensus 66 ~~~~~----------------------~~~~~g~~~~~~~~---------~~~~~~~~lv~~~D~P~~~~~~i~~l~~~~ 114 (245)
T 1h7e_A 66 AIMTR----------------------NDHESGTDRLVEVM---------HKVEADIYINLQGDEPMIRPRDVETLLQGM 114 (245)
T ss_dssp EEECC----------------------SCCSSHHHHHHHHH---------HHSCCSEEEECCTTCTTCCHHHHHHHHHHH
T ss_pred EEeCC----------------------CccCCcHHHHHHHH---------HhCCCCEEEEEcCCcCcCCHHHHHHHHHHH
Confidence 22200 01134555554332 222457999999999 7654442 445555
Q ss_pred HHc-CCcceEEEeeec----cCCCcceEEEEeCCeeEEEEeccCChhhhhhccccccccEEEEEeEEEeHHHHHHHHHhc
Q 012172 237 IQN-KNEYCMEVTPKT----LADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEAD 311 (469)
Q Consensus 237 ~~~-~~~~~~~v~~k~----~~~~~~G~iv~~~g~~~ivEy~~~~~e~~~~~~~~~~~~~~Nt~~~~~~l~~L~~~l~~~ 311 (469)
... ++++++.+++.. ..+...+++...+|++..+..+..+... +. ...-.+.|+|.|+|+.+.|.+.+ +
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~r-~~---~~~~~~~~~g~y~~~~~~l~~~~-~- 188 (245)
T 1h7e_A 115 RDDPALPVATLCHAISAAEAAEPSTVKVVVNTRQDALYFSRSPIPYPR-NA---EKARYLKHVGIYAYRRDVLQNYS-Q- 188 (245)
T ss_dssp HHCTTCCEEEEEEEECHHHHTCTTSCEEEECTTCBEEEEESSCSSCCT-TG---GGCCEEEEEEEEEEEHHHHHHGG-G-
T ss_pred HhCCCCCEEEEeecCCHHHhcCCCCcEEEECCCCcEEEeecCCCCCCc-cc---ccCceeEEEEEEEcCHHHHHHHH-h-
Confidence 555 566665554431 0122233333456665432222222110 00 00113569999999999887765 2
Q ss_pred ccccccccCCCcCCCcceehhHHHhhhH--hhhcccceeEeecCccccccCCchhHHHHHHHHHH
Q 012172 312 ALKMEIIPNPKEVDGIKVLQLETAAGAA--IRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLYT 374 (469)
Q Consensus 312 ~~~lp~~~n~K~~~g~~~iqle~~~~d~--~~~~~~~~~v~v~r~eF~pVKn~~dL~~~~~~~~~ 374 (469)
++ .++. .+...+... +..-.++.++.++ ..+..|.+..|+..++..+..
T Consensus 189 ---~~--------~~~~--~~td~~~~~~~~~~g~~v~~~~~~-~~~~dIdtp~Dl~~a~~~l~~ 239 (245)
T 1h7e_A 189 ---LP--------ESMP--EQAESLEQLRLMNAGINIRTFEVA-ATGPGVDTPACLEKVRALMAQ 239 (245)
T ss_dssp ---SC--------CCHH--HHHHTCTTHHHHHTTCCEEEEECC-CCCCCSSSHHHHHHHHHHHHH
T ss_pred ---CC--------CCcc--ccchhhHHHHHHHCCCeEEEEEeC-CCCCCCCCHHHHHHHHHHHHH
Confidence 00 1221 111111111 1222456666767 688999999999999877653
No 30
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=99.30 E-value=4.6e-11 Score=115.88 Aligned_cols=219 Identities=11% Similarity=0.121 Sum_probs=126.6
Q ss_pred ceeEEEEcCCCCCcCC---CCCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCCCC
Q 012172 79 KLVVLKLNGGLGTTMG---CTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNV 155 (469)
Q Consensus 79 k~avviLAGG~GTRmg---~~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~~~ 155 (469)
++.+||||||.||||+ .+.||.|+++ .|+||++++++++...+-. .++|.|++ ..+.+.++.+++
T Consensus 25 ~~~aiIlAaG~gtRl~plt~~~pK~l~~i-~gkpli~~~l~~l~~~g~~-----~i~vv~~~-~~~~i~~~~~~~----- 92 (254)
T 1jyk_A 25 RVKAIILAAGLGTRLRPLTENTPKALVQV-NQKPLIEYQIEFLKEKGIN-----DIIIIVGY-LKEQFDYLKEKY----- 92 (254)
T ss_dssp CCEEEEEECSCCGGGTTTTSSSCGGGCEE-TTEEHHHHHHHHHHHTTCC-----CEEEEECT-TGGGGTHHHHHH-----
T ss_pred CceEEEECCCCcccCCcccCCCCCEEeeE-CCEEHHHHHHHHHHHCCCC-----eEEEEeCC-cHHHHHHHHHhC-----
Confidence 6789999999999999 5789999999 9999999999999876421 34555555 456665555432
Q ss_pred ceEEEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCcc-ccccccHHHHH
Q 012172 156 EIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDN-LGAIVDLKILN 234 (469)
Q Consensus 156 ~i~~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DN-L~~~~dp~~Lg 234 (469)
.+.++.+.. +.+.|+++.+..... .+ +.++|+++|+ +.. +. +.
T Consensus 93 ~~~iv~~~~----------------------~~~~g~~~al~~a~~-----~~-----~~~lv~~~D~~~~~--~~--~~ 136 (254)
T 1jyk_A 93 GVRLVFNDK----------------------YADYNNFYSLYLVKE-----EL-----ANSYVIDADNYLFK--NM--FR 136 (254)
T ss_dssp CCEEEECTT----------------------TTTSCTHHHHHTTGG-----GC-----TTEEEEETTEEESS--CC--CC
T ss_pred CcEEEECCC----------------------ccCCCcHHHHHHHHH-----HC-----CCEEEEeCCcccCH--HH--HH
Confidence 134333321 124566554322211 11 2478999999 443 31 11
Q ss_pred HHHHcCCcceEEEeeeccCCCcceEEEEeCCee-EEEEeccCChhhhhhccccccccEEEEEeEEEeHHHH---HHHHHh
Q 012172 235 HLIQNKNEYCMEVTPKTLADVKGGTLISYEGKV-QLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAI---KRLVEA 310 (469)
Q Consensus 235 ~~~~~~~~~~~~v~~k~~~~~~~G~iv~~~g~~-~ivEy~~~~~e~~~~~~~~~~~~~~Nt~~~~~~l~~L---~~~l~~ 310 (469)
.+.+. ...+. +...++...+|+++..+|++ .+.| + + ...+.|+|+++|+.+.+ .+++++
T Consensus 137 ~~~~~--~~~~t-~~~~~~~~~~~v~~d~~g~v~~~~e-~--~-----------~~~~~~~Giy~~~~~~~~~l~~~l~~ 199 (254)
T 1jyk_A 137 NDLTR--STYFS-VYREDCTNEWFLVYGDDYKVQDIIV-D--S-----------KAGRILSGVSFWDAPTAEKIVSFIDK 199 (254)
T ss_dssp SCCCS--EEEEE-CEESSCSSCCEEEECTTCBEEEEEC-C--C-----------SSEEBCCSEEEECHHHHHHHHHHHHH
T ss_pred HHHhC--CceEE-EEcccCCCCeEEEECCCCeEEEEEE-C--C-----------CCCcEEEEEEEEcHHHHHHHHHHHHH
Confidence 11221 11122 22233333577665456766 3565 1 1 13478999999987654 344433
Q ss_pred cccccccccCCCcCCCcceehhHHHhhhHhhhcccceeEeecCccccccCCchhHHHHHHHHH
Q 012172 311 DALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLY 373 (469)
Q Consensus 311 ~~~~lp~~~n~K~~~g~~~iqle~~~~d~~~~~~~~~~v~v~r~eF~pVKn~~dL~~~~~~~~ 373 (469)
..+.+.. ++. .++..+.....- .++.++.++...+..|++..||..++..+.
T Consensus 200 -------~~~~~~~-~e~--~~~d~~~~l~~~-~~v~~~~~~~~~~~~Idt~edl~~a~~~l~ 251 (254)
T 1jyk_A 200 -------AYVSGEF-VDL--YWDNMVKDNIKE-LDVYVEELEGNSIYEIDSVQDYRKLEEILK 251 (254)
T ss_dssp -------HHTTTCC-TTC--CTTHHHHTTGGG-CCEEEEECCTTSEEECCSHHHHHHHHHHHC
T ss_pred -------HHhcCCc-ccc--CHHHHHHHHHhh-CCeEEEEecCCeEEEcCCHHHHHHHHHHhh
Confidence 2222211 221 122222222211 345566676678999999999999987764
No 31
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=99.30 E-value=1.1e-10 Score=115.63 Aligned_cols=231 Identities=13% Similarity=0.102 Sum_probs=138.9
Q ss_pred ceeEEEEcCCCCCcCCC---CCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhc----
Q 012172 79 KLVVLKLNGGLGTTMGC---TGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYS---- 151 (469)
Q Consensus 79 k~avviLAGG~GTRmg~---~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~---- 151 (469)
.+.+||||||.||||+. +.||.|+|+ .|+|+++++++++...+-+ .++|.|++ ..+.+.+++....
T Consensus 8 ~~~avIlAaG~gtRl~plt~~~pK~ll~i-~gkpli~~~l~~l~~~gi~-----~i~vv~~~-~~~~i~~~~~~~~~l~~ 80 (302)
T 2e3d_A 8 VKKAVIPVAGLGTRMLPATKAIPKEMLPL-VDKPLIQYVVNECIAAGIT-----EIVLVTHS-SKNSIENHFDTSFELEA 80 (302)
T ss_dssp CCEEEEECCSCCGGGTTTTSSSCGGGCEE-TTEEHHHHHHHHHHHTTCC-----EEEEEECG-GGHHHHHHHSCCHHHHH
T ss_pred ccEEEEECCcCcccCCccccCCCceeeEE-CCeEHHHHHHHHHHHCCCC-----EEEEEeCC-CHHHHHHHHhcchhhhh
Confidence 36789999999999986 679999999 9999999999999876411 34555555 4677877775310
Q ss_pred -----C-------------CCCceEEEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCC
Q 012172 152 -----K-------------SNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGK 213 (469)
Q Consensus 152 -----g-------------~~~~i~~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~ 213 (469)
+ .+.++.+..|. .|.|+|+.+.... +. + +-
T Consensus 81 ~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~------------------------~~~Gt~~al~~a~-----~~-~--~~ 128 (302)
T 2e3d_A 81 MLEKRVKRQLLDEVQSICPPHVTIMQVRQG------------------------LAKGLGHAVLCAH-----PV-V--GD 128 (302)
T ss_dssp HHC----CHHHHHHHHTSCTTCEEEEEECS------------------------SCCCHHHHHHHTH-----HH-H--CS
T ss_pred hhhhccchhhhhhhhhccccCcceEEeeCC------------------------ccCCHHHHHHHHH-----HH-c--CC
Confidence 0 01122222221 2578888654322 22 2 23
Q ss_pred cEEEEEeCccccc----cc---cH-HHHHHHHHcCCcceEEEeeeccCCCcceEEEE-----eCC---ee-EEEEeccCC
Q 012172 214 EYVFAANSDNLGA----IV---DL-KILNHLIQNKNEYCMEVTPKTLADVKGGTLIS-----YEG---KV-QLLEIAQVP 276 (469)
Q Consensus 214 ~~v~v~n~DNL~~----~~---dp-~~Lg~~~~~~~~~~~~v~~k~~~~~~~G~iv~-----~~g---~~-~ivEy~~~~ 276 (469)
++++|+++|++.. .. +. .++..+.+.++ .++.+. ...++..+|++.. .+| ++ .++|....
T Consensus 129 ~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~~~~-~~i~~~-~~~~~~~yg~v~~~~~~~~~g~~~~v~~~~ekp~~- 205 (302)
T 2e3d_A 129 EPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGH-SQIMVE-PVADVTAYGVVDCKGVELAPGESVPMVGVVEKPKA- 205 (302)
T ss_dssp SCEEEECTTEEECTTSSCTTTSTHHHHHHHHHHHCC-EEEEEE-ECSCGGGSEEEECTTCCCCTTCEEEECEEEESCCT-
T ss_pred CcEEEEcCCccccCccccchHHHHHHHHHHHHhcCC-cEEEEE-EccCCCCccEEEecccccCCCCceeEEEEEECCCC-
Confidence 6899999999544 22 32 45555555555 333333 3466678998864 456 54 35664211
Q ss_pred hhhhhhccccccccEEEEEeEEEeHHHHHHHHHhcccccccccCCCcCCCcceehhHHHhhhHhhhcccceeEeecCccc
Q 012172 277 DEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRF 356 (469)
Q Consensus 277 ~e~~~~~~~~~~~~~~Nt~~~~~~l~~L~~~l~~~~~~lp~~~n~K~~~g~~~iqle~~~~d~~~~~~~~~~v~v~r~eF 356 (469)
+. ......|+|+|+|+.+.+ +.+++ +... ..++ +.+...+..+++.- ++.++.++. .+
T Consensus 206 -~~-------~~~~~~~~Giyi~~~~~l-~~l~~-------~~~~--~~~~--~~l~d~i~~l~~~~-~v~~~~~~~-~~ 263 (302)
T 2e3d_A 206 -DV-------APSNLAIVGRYVLSADIW-PLLAK-------TPPG--AGDE--IQLTDAIDMLIEKE-TVEAYHMKG-KS 263 (302)
T ss_dssp -TT-------CSCSEEEEEEEEECTTHH-HHHTC-------CCC------C--CCHHHHHHHHHHHS-CEEEEECCS-CE
T ss_pred -Cc-------cccceEEEEEEEECHHHH-HHHHh-------hCCC--CCCc--eehHHHHHHHHHhC-CEEEEEeCC-eE
Confidence 11 122478999999998866 33332 1110 1122 33444444444432 455555553 78
Q ss_pred cccCCchhHHHHHHHHH
Q 012172 357 LPVKATSDLLLVQSDLY 373 (469)
Q Consensus 357 ~pVKn~~dL~~~~~~~~ 373 (469)
.-|.+..|+..++.++.
T Consensus 264 ~DIgt~~d~~~a~~~~~ 280 (302)
T 2e3d_A 264 HDCGNKLGYMQAFVEYG 280 (302)
T ss_dssp EECSSHHHHHHHHHHHH
T ss_pred EcCCCHHHHHHHHHHHH
Confidence 89999999988876553
No 32
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=99.27 E-value=3.2e-10 Score=110.03 Aligned_cols=238 Identities=12% Similarity=0.096 Sum_probs=137.3
Q ss_pred ceeEEEEcCCCCCcCCCCCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCCCCceE
Q 012172 79 KLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIH 158 (469)
Q Consensus 79 k~avviLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~~~~i~ 158 (469)
++.+||||||.||||+ +|.|+++ .|+||+++.++++..... -.+++.|+ ++.+.++++++ .+.
T Consensus 2 ~~~aiIlA~G~g~R~~---~K~l~~~-~gkpli~~~l~~l~~~~~-----~~ivvv~~---~~~i~~~~~~~-----~~~ 64 (262)
T 1vic_A 2 SFTVIIPARFASSRLP---GKPLADI-KGKPMIQHVFEKALQSGA-----SRVIIATD---NENVADVAKSF-----GAE 64 (262)
T ss_dssp CCEEEEECCCCCSSST---TGGGCEE-TTEEHHHHHHHHHHHTTC-----SEEEEEES---CHHHHHHHHHT-----TCE
T ss_pred CcEEEEEcCCCCCCCC---CCccccC-CCeEHHHHHHHHHHhCCC-----ceEEEECC---cHHHHHHHHhc-----CCE
Confidence 5678999999999997 5999999 999999999999987642 23455443 35677777653 233
Q ss_pred EEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCcc-ccccccH-HHHHHH
Q 012172 159 TFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDN-LGAIVDL-KILNHL 236 (469)
Q Consensus 159 ~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DN-L~~~~dp-~~Lg~~ 236 (469)
++.+.. ..|.|+|.+.. .+..+...+.++++++++|+ +....+. .++..+
T Consensus 65 ~~~~~~----------------------~~~~g~~~~~~------~~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 116 (262)
T 1vic_A 65 VCMTSV----------------------NHNSGTERLAE------VVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNL 116 (262)
T ss_dssp EEECCC----------------------SSCCHHHHHHH------HHHHTTCCTTCEEEECCTTCTTCCHHHHHHHHHHH
T ss_pred EEECCc----------------------cccCChHHHHH------HHHHhccCCCCEEEEEeCCcCccCHHHHHHHHHHH
Confidence 333210 12345553221 12233222457999999999 7665443 445555
Q ss_pred HHcCCcceEEEeeeccC----CCcceEEE-EeCCeeEEEEeccCC--hhhh-----hhccccccccEEEEEeEEEeHHHH
Q 012172 237 IQNKNEYCMEVTPKTLA----DVKGGTLI-SYEGKVQLLEIAQVP--DEHV-----NEFKSIEKFKIFNTNNLWVNLKAI 304 (469)
Q Consensus 237 ~~~~~~~~~~v~~k~~~----~~~~G~iv-~~~g~~~ivEy~~~~--~e~~-----~~~~~~~~~~~~Nt~~~~~~l~~L 304 (469)
.+.++++++.+++..++ ...++.++ ..+|++.....+-.+ .+.. ............|+|.|+++.+.+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~f~~~~~~~~r~~~~~~~~~~~~~~p~~~~~~~giy~~~~~~l 196 (262)
T 1vic_A 117 AKFNVNMASLAVKIHDAEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFMNLQDVQKVQLSDAYLRHIGIYAYRAGFI 196 (262)
T ss_dssp HHHTCSEEEEEEECCCHHHHTCTTSCEEEECTTSBEEEEESSCSSCCHHHHTTCSCGGGCCCCTTCEEEEEEEEEEHHHH
T ss_pred HhcCCCEEEEEEecCCHHHhcCCCceEEEECCCCCEeeeecCCCCcCCccccccccccccccccceEEEEEEEEeeHHHH
Confidence 55666766655554332 12344444 345665422222222 1110 000011223467999999999988
Q ss_pred HHHHHhcccccccccCCCcCCCcceehhHHHhhhHhhhcccceeEeecCccccccCCchhHHHHHHHHHH
Q 012172 305 KRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLYT 374 (469)
Q Consensus 305 ~~~l~~~~~~lp~~~n~K~~~g~~~iqle~~~~d~~~~~~~~~~v~v~r~eF~pVKn~~dL~~~~~~~~~ 374 (469)
..+.... .+.. -+.+. +|.. .++..-.++.++.++..++..|.+..||..++..+..
T Consensus 197 ~~~~~~~-------~~~~-~~~e~---~~~~--~~l~~g~~v~~~~~~~~~~~dI~tpeDl~~a~~~l~~ 253 (262)
T 1vic_A 197 KQYVQWA-------PTQL-ENLEK---LEQL--RVLYNGERIHVELAKEVPAVGVDTAEDLEKVRAILAA 253 (262)
T ss_dssp HHHHHSC-------CCHH-HHHHT---CTTH--HHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHHHHHH
T ss_pred HHHHhCC-------CCch-hhhhh---HHHH--HHHHCCCeEEEEEeCCCCCCCCCCHHHHHHHHHHHHh
Confidence 8764320 0000 00011 1110 1222234566677766689999999999999887753
No 33
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=99.25 E-value=2.5e-10 Score=108.28 Aligned_cols=224 Identities=12% Similarity=0.084 Sum_probs=128.9
Q ss_pred ceeEEEEcCCCCCcCCCCCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCCCCceE
Q 012172 79 KLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIH 158 (469)
Q Consensus 79 k~avviLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~~~~i~ 158 (469)
++.+||||||.||||+ ||.++++ .|+|++++.++++... -. .+++.|++ +.+.++++++ +.
T Consensus 2 ~~~aiIlA~G~g~R~~---~K~l~~i-~g~pli~~~l~~~~~~-~~-----~i~v~~~~---~~i~~~~~~~------~~ 62 (234)
T 2y6p_A 2 RRAVIIPARLGSTRLK---EKPLKNL-LGKPLIRWVVEGLVKT-GE-----RVILATDS---ERVKEVVEDL------CE 62 (234)
T ss_dssp CEEEEEECCSCCTTTT---TGGGCEE-TTEEHHHHHHHHHHTT-TS-----CEEEEESC---HHHHHHHTTT------SE
T ss_pred ceEEEEEcCCCCCCCC---CCcceeE-CCEEHHHHHHHHHHHh-CC-----EEEEECCh---HHHHHHHHhc------eE
Confidence 5778999999999998 9999999 9999999999999776 21 34554443 6666666432 12
Q ss_pred EEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCcc-ccccccH-HHHHHH
Q 012172 159 TFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDN-LGAIVDL-KILNHL 236 (469)
Q Consensus 159 ~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DN-L~~~~dp-~~Lg~~ 236 (469)
++... ...+.|+|+++.++. ..+.++++++++|+ +....+. .++..+
T Consensus 63 ~~~~~----------------------~~~~~g~~~~~~~~~---------~~~~~~vlv~~~D~P~~~~~~i~~l~~~~ 111 (234)
T 2y6p_A 63 VFLTP----------------------SDLPSGSDRVLYVVR---------DLDVDLIINYQGDEPFVYEEDIKLIFREL 111 (234)
T ss_dssp EEECC----------------------TTCCSHHHHHHHHHT---------TCCCSEEEECCTTCCCCCHHHHHHHHHHH
T ss_pred EEECC----------------------cccccchHHHHHHHH---------hCCCCEEEEecCCcCcCCHHHHHHHHHHH
Confidence 22111 112456776653332 22457999999999 8764443 345555
Q ss_pred HHcCCcceEEEeee---ccCCCcceEEEEeCCeeE-EEEeccCChhhhhhccccccccEEEEEeEEEeHHHHHHHHHhcc
Q 012172 237 IQNKNEYCMEVTPK---TLADVKGGTLISYEGKVQ-LLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADA 312 (469)
Q Consensus 237 ~~~~~~~~~~v~~k---~~~~~~~G~iv~~~g~~~-ivEy~~~~~e~~~~~~~~~~~~~~Nt~~~~~~l~~L~~~l~~~~ 312 (469)
.+.+ +...-+... ...+..++++...+|++. +.|.. .+. ..+. .+ .. .+.|+|.|+|+.+.+.++.....
T Consensus 112 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~e~~-~~~-~~~~-~~-~~-~~~~~giy~~~~~~l~~~~~~~~ 185 (234)
T 2y6p_A 112 EKGE-RVVTLARKDKEAYERPEDVKVVLDREGYALYFSRSP-IPY-FRKN-DT-FY-PLKHVGIYGFRKETLMEFGAMPP 185 (234)
T ss_dssp HHTC-SEEEEEEECSGGGGCTTSCEEEECTTSBEEEEESSC-CSC-CSSC-CS-SC-CEEEEEEEEEEHHHHHHHHHSCC
T ss_pred HhCC-CeEEEecCCHHHhcCCCceEEEEcCCCCEeeeecCC-CCc-cccc-cc-ce-eeEEEEEEEcCHHHHHHHHhCCC
Confidence 4545 332222221 123445565444567653 44421 110 0000 00 11 24699999999999987754200
Q ss_pred cccccccCCCcCCCcceehhHHHhhhHhhhcccceeEeecCccccccCCchhHHHHHHHH
Q 012172 313 LKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDL 372 (469)
Q Consensus 313 ~~lp~~~n~K~~~g~~~iqle~~~~d~~~~~~~~~~v~v~r~eF~pVKn~~dL~~~~~~~ 372 (469)
..... .+. + +. + ..+..-.++.++.++ ..+.-|.+..|+..++..+
T Consensus 186 -------~~~~~-~d~-~--~~-~-~~~~~g~~v~~~~~~-~~~~dI~t~~dl~~a~~~~ 231 (234)
T 2y6p_A 186 -------SKLEQ-IEG-L--EQ-L-RLLENGIKIKVLITE-NYYHGVDTEEDLKIVEEKL 231 (234)
T ss_dssp -------CHHHH-HHT-C--TH-H-HHHHTTCCCEEEECC-SCCCCCCSHHHHHHHHHHC
T ss_pred -------Cccch-hhH-H--HH-H-HHHHCCCeEEEEEeC-CcccCCCCHHHHHHHHHHH
Confidence 00000 011 1 11 0 112222455666666 6789999999999987654
No 34
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=99.24 E-value=7.8e-11 Score=117.45 Aligned_cols=190 Identities=14% Similarity=0.118 Sum_probs=108.2
Q ss_pred ceeEEEEcCCCCCcCC--C--CCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCCC
Q 012172 79 KLVVLKLNGGLGTTMG--C--TGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSN 154 (469)
Q Consensus 79 k~avviLAGG~GTRmg--~--~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~~ 154 (469)
++.+||||||.||||+ + ..||.|+++.+|+||++++++++... -. .++|.|++...+.+.++++.+.+.
T Consensus 4 ~~~avIlAgG~gtRl~plt~~~~pK~ll~i~gg~pli~~~l~~l~~~-~~-----~i~vv~~~~~~~~i~~~~~~~~~~- 76 (308)
T 2qh5_A 4 KIKNILLSGGSGKRLWPLSRSLYPKQFLKLFDHKSLFELSFKRNASL-VD-----ETLIVCNEKHYFLALEEIKNEIKN- 76 (308)
T ss_dssp CEEEEEECC-------------CCGGGCTTBTTBCHHHHHHHHHHTT-CS-----EEEEEEEGGGHHHHHHHTTTTCSS-
T ss_pred ccEEEEEcCCCCccCCccCCCCCCCEEEECCCCCCHHHHHHHHHHcc-CC-----CEEEEEChhHHHHHHHHHHHhhCC-
Confidence 4678999999999996 3 57999999955999999999999876 22 445555653335666777542111
Q ss_pred CceEEEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCcccccccc-H-HH
Q 012172 155 VEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVD-L-KI 232 (469)
Q Consensus 155 ~~i~~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DNL~~~~d-p-~~ 232 (469)
.++.++.|. .|.|+|+....... .+ ..-++++|+++|++....+ . .+
T Consensus 77 ~~~~~i~~~------------------------~~~gt~~al~~a~~-----~l--~~~~~~lv~~~D~~~~~~~~~~~~ 125 (308)
T 2qh5_A 77 KSVGFLLES------------------------LSKNTANAIALSAL-----MS--DKEDLLIVTPSDHLIKDLQAYENA 125 (308)
T ss_dssp CEEEEEEES------------------------SCCCHHHHHHHHHH-----TS--CTTSEEEEEESSCBCCCHHHHHHH
T ss_pred CccEEEeCC------------------------CCCChHHHHHHHHH-----Hh--CCCCeEEEEcCCccccCHHHHHHH
Confidence 034444443 25678777433221 11 1234799999999542222 2 34
Q ss_pred HHH---HHHcCCcceEEEeeeccCCCcceEEEEe-CCee-EEEEeccCChhhhhhccccccccEEEEEeEEEeHHHHHHH
Q 012172 233 LNH---LIQNKNEYCMEVTPKTLADVKGGTLISY-EGKV-QLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRL 307 (469)
Q Consensus 233 Lg~---~~~~~~~~~~~v~~k~~~~~~~G~iv~~-~g~~-~ivEy~~~~~e~~~~~~~~~~~~~~Nt~~~~~~l~~L~~~ 307 (469)
+.. +.+.++..++.+. ...++..+|++... +|++ .++|..+.+. ...+.. ..-.+.|+|+|+|+.+.+.+.
T Consensus 126 ~~~~~~~~~~~~~~t~~~~-~~~~~~~~g~i~~d~~~~V~~~~Ekp~~~~--~~~~~~-~g~~~~n~Giy~~~~~~ll~~ 201 (308)
T 2qh5_A 126 IKKAIDLAQKGFLVTFGVS-IDKPNTEFGYIESPNGLDVKRFIEKPSLDK--AIEFQK-SGGFYFNSGMFVFQAGVFLDE 201 (308)
T ss_dssp HHHHHHHHHTTCEEEEEEE-CSSCCTTSEEEECSSSSBCSEEEESCCHHH--HHHHHH-HCCEEEEEEEEEEEHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEEEe-cCCCCCCceEEEECCCCEEEEEEECCChHH--HHHHhh-cCCeEEEeEEEEEEHHHHHHH
Confidence 444 3444554444443 44566789988754 5676 5777433211 111100 112468999999999887666
Q ss_pred HHh
Q 012172 308 VEA 310 (469)
Q Consensus 308 l~~ 310 (469)
+.+
T Consensus 202 l~~ 204 (308)
T 2qh5_A 202 LKK 204 (308)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 35
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=99.23 E-value=8.7e-11 Score=113.23 Aligned_cols=227 Identities=13% Similarity=0.112 Sum_probs=119.9
Q ss_pred ceeEEEEcCCCCCcCCC-CCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCCCCce
Q 012172 79 KLVVLKLNGGLGTTMGC-TGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEI 157 (469)
Q Consensus 79 k~avviLAGG~GTRmg~-~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~~~~i 157 (469)
++.+||||||.|||||+ +.||.++++ .|+|+|+|.++++..... --.+++.++....+.+.+.++++.... .+
T Consensus 3 ~~~aIIlAaG~g~Rm~~~~~pK~l~~l-~Gkpll~~~l~~~~~~~~----~~~ivvv~~~~~~~~~~~~~~~~~~~~-~~ 76 (246)
T 3f1c_A 3 LIYAQILAGGKGTRMGNVSMPKQFLPL-NGKPIIVHTVEKFILNTR----FDKILISSPKEWMNHAEDNIKKYISDD-RI 76 (246)
T ss_dssp CEEEEEECC-----C-CSSCCGGGSEE-TTEEHHHHHHHHHHTCTT----CSEEEEEECGGGHHHHHHHHHHHCCCT-TE
T ss_pred ccEEEEECCccccccCCCCCCCeEEEE-CCeeHHHHHHHHHHcCCC----CCEEEEEeCHHHHHHHHHHHHHhCCCC-CE
Confidence 57899999999999998 889999999 999999999999987641 113444445532334566666654321 23
Q ss_pred EEEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHH----cCCcEEEEEeCcc-ccccccH-H
Q 012172 158 HTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALIS----QGKEYVFAANSDN-LGAIVDL-K 231 (469)
Q Consensus 158 ~~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~----~G~~~v~v~n~DN-L~~~~dp-~ 231 (469)
.+ .++ |.|-. .++.. | ++.+.. .+.++++|.++|. |....+. .
T Consensus 77 ~~-~~~---------------------------~~~~~-~sv~~-a-l~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~ 125 (246)
T 3f1c_A 77 VV-IEG---------------------------GEDRN-ETIMN-G-IRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEE 125 (246)
T ss_dssp EE-EEC---------------------------CSSHH-HHHHH-H-HHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHH
T ss_pred EE-ECC---------------------------CCchH-HHHHH-H-HHHHhhhhcCCCCCEEEEecCcccCCCHHHHHH
Confidence 22 221 12211 11111 1 234443 1358999999999 8765443 4
Q ss_pred HHHHHHHcCCcceEEEeeeccCCCcceEEEEe-C-CeeEEEEeccCChhhhhhccccccccEEEEEeEEEeHHHHHHHHH
Q 012172 232 ILNHLIQNKNEYCMEVTPKTLADVKGGTLISY-E-GKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVE 309 (469)
Q Consensus 232 ~Lg~~~~~~~~~~~~v~~k~~~~~~~G~iv~~-~-g~~~ivEy~~~~~e~~~~~~~~~~~~~~Nt~~~~~~l~~L~~~l~ 309 (469)
++..+.+.+ .++.+++..+ ++++. + |.+..+|.++. +...- .-.+|+.+.|.+.++
T Consensus 126 li~~~~~~~--a~i~~~~~~d------~i~~~~~~~~v~~~~~r~~-------------l~~~q-tpq~f~~~~L~~a~~ 183 (246)
T 3f1c_A 126 NIDAALETG--AVDTVIEALD------TIVESSNHEVITDIPVRDH-------------MYQGQ-TPQSFNMKKVFNHYQ 183 (246)
T ss_dssp HHHHHHHTS--EEEEEEECSS------CEEECSSSSBCCBCCCGGG-------------EEEEE-EEEEEEHHHHHHHHH
T ss_pred HHHHHHhcC--CEEEEEeccc------eEEEecCCCeEEEecChHH-------------hhhhc-CCceeEHHHHHHHHH
Confidence 455554433 3333333322 33442 2 33433332211 11111 224899999999887
Q ss_pred hcccccccccCCCcCCCcceehhHHHhhhHhhhcccceeEeecCccccccCCchhHHHHHHHHHHhhcC
Q 012172 310 ADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLYTLADG 378 (469)
Q Consensus 310 ~~~~~lp~~~n~K~~~g~~~iqle~~~~d~~~~~~~~~~v~v~r~eF~pVKn~~dL~~~~~~~~~l~~g 378 (469)
+ ..+. +++ .+.....-+.....++.+++.+ .+...|+++.||..+++.++...++
T Consensus 184 ~-------~~~~----~~~--~~TD~~~~~~~~g~~v~~v~~~-~~~~~Itt~~Dl~~ae~~l~~~~~~ 238 (246)
T 3f1c_A 184 N-------LTPE----KKQ--ILTDACKICLLAGDDVKLVKGE-IFNIKITTPYDLKVANAIIQERIAN 238 (246)
T ss_dssp T-------SCHH----HHH--HCCCHHHHHHHTTCCCEEEECC-TTCCCCCSHHHHHHHHHHHHHHC--
T ss_pred H-------HHHc----CCC--ccCcHHHHHHHcCCCEEEEeCC-CCccCcCCHHHHHHHHHHHhccccc
Confidence 5 2111 111 0000111111112344555554 6789999999999999988765543
No 36
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.23 E-value=1.3e-10 Score=116.50 Aligned_cols=234 Identities=17% Similarity=0.125 Sum_probs=136.7
Q ss_pred eeEEEEcCCCCCcCCC---CCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhc-----
Q 012172 80 LVVLKLNGGLGTTMGC---TGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYS----- 151 (469)
Q Consensus 80 ~avviLAGG~GTRmg~---~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~----- 151 (469)
+.+||||||.||||+. ..||.|+|+ .|+||++++++++...+- . .++|.|++ ..+.+.+++....
T Consensus 13 ~~aVIlAaG~gtRl~plt~~~pK~ll~i-~gkpli~~~l~~l~~~gi----~-~iivv~~~-~~~~i~~~~~~~~~~~~~ 85 (323)
T 2pa4_A 13 KTVVVPAAGLGTRFLPATKTVPKELLPV-VDTPGIELIAAEAAELGA----T-RLAIITAP-NKAGVLAHFERSSELEET 85 (323)
T ss_dssp CEEEEECCCCCGGGTTGGGTSCGGGCEE-TTEEHHHHHHHHHHHTTC----C-EEEEEECT-TCHHHHHTTSCCHHHHHH
T ss_pred eEEEEECCCCccccCccccCCCceeeeE-CCEEHHHHHHHHHHhCCC----C-EEEEEecC-cHHHHHHHHhccchhhhh
Confidence 5689999999999986 779999999 899999999999987531 1 34555555 4566766653200
Q ss_pred ----C------------CCCceEEEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcE
Q 012172 152 ----K------------SNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEY 215 (469)
Q Consensus 152 ----g------------~~~~i~~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~ 215 (469)
+ .+.++.+..|. .|.|+|+.+..... . +....++
T Consensus 86 l~~~~~~~~~~~~~~~~~g~~i~~~~~~------------------------~~~Gt~~al~~a~~-----~-l~~~~d~ 135 (323)
T 2pa4_A 86 LMERGKTDQVEIIRRAADLIKAVPVTQD------------------------KPLGLGHAVGLAES-----V-LDDDEDV 135 (323)
T ss_dssp HHHTTCHHHHHHTTHHHHHCEEEEEECS------------------------SCCCHHHHHHTTGG-----G-SCSSCCE
T ss_pred hhccchhhhhhhhhccccCcceEEEeCC------------------------ccCCcHHHHHHHHH-----H-hcCCCCe
Confidence 0 00123333332 24678887543322 1 1123356
Q ss_pred EEEEeCccccc-cccH-HHHHHHHHcCCcceEEEeee-ccCCCcceEEEEe----CC---ee-EEEEeccCChhhhhhcc
Q 012172 216 VFAANSDNLGA-IVDL-KILNHLIQNKNEYCMEVTPK-TLADVKGGTLISY----EG---KV-QLLEIAQVPDEHVNEFK 284 (469)
Q Consensus 216 v~v~n~DNL~~-~~dp-~~Lg~~~~~~~~~~~~v~~k-~~~~~~~G~iv~~----~g---~~-~ivEy~~~~~e~~~~~~ 284 (469)
++|+++|++.. ..+. .++.++.+.++ ..+.+... ..+...+|++... ++ ++ .++|.... +.
T Consensus 136 ~lv~~~D~~~~~~~~l~~l~~~~~~~~~-~~i~~~~~~~~~~~~yg~v~~d~~~~~~~~~~V~~~~Ekp~~--~~----- 207 (323)
T 2pa4_A 136 VAVMLPDDLVLPTGVMERMAQVRAEFGG-SVLCAVEVSEADVSKYGIFEIEADTKDSDVKKVKGMVEKPAI--ED----- 207 (323)
T ss_dssp EEEECTTEEEESSCHHHHHHHHHHTTCS-EEEEEEECCGGGGGGSEEEEEEECCSSTTEEEEEEEEESCCT--TT-----
T ss_pred EEEEeCCcccCchHHHHHHHHHHHhcCC-cEEEEEEecccccCCccEEEeCCcccCCCceeEEEEEECCCC--cc-----
Confidence 99999999444 2343 34555544443 23333322 1345678877654 33 44 35663211 11
Q ss_pred ccccccEEEEEeEEEeHHHHHHHHHhcccccccccCCCcCCCcceehhHHHhhhHhhhcccceeEeecCccccccCCchh
Q 012172 285 SIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSD 364 (469)
Q Consensus 285 ~~~~~~~~Nt~~~~~~l~~L~~~l~~~~~~lp~~~n~K~~~g~~~iqle~~~~d~~~~~~~~~~v~v~r~eF~pVKn~~d 364 (469)
......|+|+|+|+.+.+. .+.+ .... ..+ .+.+...+...++...++.++.++. .+.-|.+..|
T Consensus 208 --~~~~~~~~GiY~~~~~~~~-~l~~-------~~~~--~~g--e~~l~d~i~~l~~~g~~v~~~~~~g-~w~DIgt~~d 272 (323)
T 2pa4_A 208 --APSRLAATGRYLLDRKIFD-ALRR-------ITPG--AGG--ELQLTDAIDLLIDEGHPVHIVIHQG-KRHDLGNPGG 272 (323)
T ss_dssp --CSCSEEEEEEEEEETHHHH-HHHH-------CCCC--GGG--CCCHHHHHHHHHHTTCCEEEEECCS-EEEECSSHHH
T ss_pred --ccccEEEEEEEEECHHHHH-HHHh-------hCCC--CCC--eEeHHHHHHHHHHcCCCEEEEEeCC-eEEeCCCHHH
Confidence 1224689999999998664 4333 1110 102 2334444444444434566666653 7889999999
Q ss_pred HHHHHHHHH
Q 012172 365 LLLVQSDLY 373 (469)
Q Consensus 365 L~~~~~~~~ 373 (469)
+..++..+.
T Consensus 273 l~~a~~~~~ 281 (323)
T 2pa4_A 273 YIPACVDFG 281 (323)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 988876654
No 37
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=99.18 E-value=1.4e-10 Score=114.62 Aligned_cols=233 Identities=13% Similarity=0.069 Sum_probs=124.7
Q ss_pred cceeEEEEcCCCCCcCCC---CCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhc---
Q 012172 78 DKLVVLKLNGGLGTTMGC---TGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYS--- 151 (469)
Q Consensus 78 ~k~avviLAGG~GTRmg~---~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~--- 151 (469)
..+.+||||||.||||+. ..||.|+|+ .|+||++++++++...+-. .++|.|++ ..+.+.+++....
T Consensus 13 ~~~~avIlAaG~gtRl~plt~~~pK~ll~i-~gkpli~~~l~~l~~~g~~-----~i~vv~~~-~~~~i~~~~~~~~~l~ 85 (297)
T 2ux8_A 13 PLRKAVFPVAGLGTRFLPATKAMPKEMLPV-VDRPLIQYAVDEAVEAGIE-----QMIFVTGR-GKSALEDHFDIAYELE 85 (297)
T ss_dssp CCCEEEEEECCCCGGGTTTTSSSCGGGCEE-TTEEHHHHHHHHHHHTTCC-----EEEEEECT-TCHHHHHHTSCCHHHH
T ss_pred CccEEEEECCCCccccCccccCCCceeeeE-CCeEHHHHHHHHHHhCCCC-----EEEEEeCC-CHHHHHHHHhhhhhhh
Confidence 457789999999999985 679999999 8999999999999876421 34555555 4677777764310
Q ss_pred ------C-----------CCCceEEEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCc
Q 012172 152 ------K-----------SNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKE 214 (469)
Q Consensus 152 ------g-----------~~~~i~~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~ 214 (469)
+ .+.++.+..|. .|.|+|+.+.... +. + +-+
T Consensus 86 ~~l~~~~~~~~~~~~~~~~g~~i~~~~~~------------------------~~~Gt~~al~~a~-----~~-~--~~~ 133 (297)
T 2ux8_A 86 ATMAARGKSLDVLDGTRLKPGNIAYVRQQ------------------------EPMGLGHAVWCAR-----DI-V--GDE 133 (297)
T ss_dssp HHHHTTTCCGGGGTTSCCSTTSEEEEECC------------------------SCCCHHHHHHTTH-----HH-H--CSS
T ss_pred hhhhhccchhhhhhhcccCCCceEEEeCC------------------------CCCChHHHHHHHH-----HH-c--CCC
Confidence 0 00123222221 2578888754322 22 2 237
Q ss_pred EEEEEeCccccc--cccH-HHHHHHHHcCCcceEEEeee-ccCCCcceEEEEe---CC--ee-EEEEeccCChhhhhhcc
Q 012172 215 YVFAANSDNLGA--IVDL-KILNHLIQNKNEYCMEVTPK-TLADVKGGTLISY---EG--KV-QLLEIAQVPDEHVNEFK 284 (469)
Q Consensus 215 ~v~v~n~DNL~~--~~dp-~~Lg~~~~~~~~~~~~v~~k-~~~~~~~G~iv~~---~g--~~-~ivEy~~~~~e~~~~~~ 284 (469)
+++|+++|++.. ..+. .++..+.+.++ ..+.+... ..++..+|++... +| ++ .++|.... +.
T Consensus 134 ~~lv~~~D~~~~~~~~~l~~l~~~~~~~~~-~~i~~~~~~~~~~~~yg~v~~~~~~~~~~~v~~~~ekp~~--~~----- 205 (297)
T 2ux8_A 134 PFAVLLPDDFMFGQPGCLKQMVDAYNKVGG-NLICAEEVPDDQTHRYGIITPGTQDGVLTEVKGLVEKPAP--GT----- 205 (297)
T ss_dssp CEEEECTTEEEESSSCHHHHHHHHHHHHCS-EEEEEC-----------CCCCCCBCSSEEEC------------------
T ss_pred cEEEEeCCeecCCChHHHHHHHHHHHhcCC-CEEEEEecCcccCCCCCeEEecccCCCceeEEEEEECCCC--CC-----
Confidence 899999999644 2332 44555555454 33333322 1355678877543 34 44 34553211 11
Q ss_pred ccccccEEEEEeEEEeHHHHHHHHHhcccccccccCCCcCCCcceehhHHHhhhHhhhcccceeEeecCccccccCCchh
Q 012172 285 SIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSD 364 (469)
Q Consensus 285 ~~~~~~~~Nt~~~~~~l~~L~~~l~~~~~~lp~~~n~K~~~g~~~iqle~~~~d~~~~~~~~~~v~v~r~eF~pVKn~~d 364 (469)
..-.+.|+|+|+|+.+.+ +.+++ +... ..++ +.+..++..+++. .++.++.++. .+.-|.+..|
T Consensus 206 --~~~~~~~~Giyi~~~~~l-~~l~~-------~~~~--~~~~--~~l~d~i~~l~~~-~~v~~~~~~~-~w~dIgt~~d 269 (297)
T 2ux8_A 206 --APSNLSVIGRYILQPEVM-RILEN-------QGKG--AGGE--IQLTDAMQRMIGD-QPFHGVTFQG-TRYDCGDKAG 269 (297)
T ss_dssp -----CCCEEEEEEECTHHH-HHHHH-------TC------------CCTTGGGGTTT-SCEEEEECSS-EEEETTSHHH
T ss_pred --CCccEEEEEEEEECHHHH-HHHHh-------hCCC--CCCe--eEHHHHHHHHHhc-CCEEEEEecc-eEEeCCCHHH
Confidence 112357999999998866 44443 1110 0012 1122222222222 2344555543 7889999999
Q ss_pred HHHHHHHHH
Q 012172 365 LLLVQSDLY 373 (469)
Q Consensus 365 L~~~~~~~~ 373 (469)
+..++.++.
T Consensus 270 l~~a~~~~~ 278 (297)
T 2ux8_A 270 FIQANLAVA 278 (297)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 988876654
No 38
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=99.13 E-value=4.5e-10 Score=106.42 Aligned_cols=217 Identities=7% Similarity=0.029 Sum_probs=120.5
Q ss_pred ceeEEEEcCCCCCcCCCCCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCCCCceE
Q 012172 79 KLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIH 158 (469)
Q Consensus 79 k~avviLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~~~~i~ 158 (469)
++.+||||||.||||+ ||.++++ .|+||++|.++++.+... --.+++.|. ++.+.++++++ .+.
T Consensus 4 ~~~aiIlA~G~g~R~~---~K~l~~i-~gkpll~~~l~~~~~~~~----~~~ivvv~~---~~~i~~~~~~~-----~~~ 67 (228)
T 1ezi_A 4 QNIAVILARQNSKGLP---LKNLRKM-NGISLLGHTINAAISSKC----FDRIIVSTD---GGLIAEEAKNF-----GVE 67 (228)
T ss_dssp EEEEEEECCSSCSSST---TTTTCEE-TTEEHHHHHHHHHHHHCC----CSEEEEEES---CHHHHHHHHHT-----TCE
T ss_pred ceEEEEecCCCCCCCC---Cccccee-CCcCHHHHHHHHHHhCCC----CCEEEEECC---CHHHHHHHHHc-----CCE
Confidence 5789999999999999 9999999 999999999999987641 014455443 46667777653 123
Q ss_pred EEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCcc-ccccccH-HHHHHH
Q 012172 159 TFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDN-LGAIVDL-KILNHL 236 (469)
Q Consensus 159 ~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DN-L~~~~dp-~~Lg~~ 236 (469)
++.+.. .+ .+.|.|- ..++.. + ++.+ ....++++++++|+ +....+. .++..+
T Consensus 68 ~~~~~~-------------------~~--~~~~~g~-~~sv~~-~-l~~~-~~~~d~vlv~~~D~P~~~~~~i~~l~~~~ 122 (228)
T 1ezi_A 68 VVLRPA-------------------EL--ASDTASS-ISGVIH-A-LETI-GSNSGTVTLLQPTSPLRTGAHIREAFSLF 122 (228)
T ss_dssp EEECCC---------------------------CHH-HHHHHH-H-HHHH-TCCSEEEEECCTTCTTCCHHHHHHHHTTC
T ss_pred EEeCch-------------------HH--cCCCCCh-HHHHHH-H-HHHh-CCCCCEEEEEcCCCCcCCHHHHHHHHHHH
Confidence 232210 00 0112221 112221 1 2222 22457999999999 7664442 222222
Q ss_pred HHcCCcceEEEeeeccCCCcceEEEEeCCeeE-EEEecc-CChhhhhhccccccccEEEEEeEEEeHHHHHHHHHhcccc
Q 012172 237 IQNKNEYCMEVTPKTLADVKGGTLISYEGKVQ-LLEIAQ-VPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALK 314 (469)
Q Consensus 237 ~~~~~~~~~~v~~k~~~~~~~G~iv~~~g~~~-ivEy~~-~~~e~~~~~~~~~~~~~~Nt~~~~~~l~~L~~~l~~~~~~ 314 (469)
.+.+++.++.+++..+.+.+.+++ ..+|.+. ++|.+. .+. ++........|.|.|+++.+.+.+.+.
T Consensus 123 ~~~~~~~~~~~~~~~~~p~~~~~~-~~~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~giy~~~~~~l~~~~~----- 191 (228)
T 1ezi_A 123 DEKIKGSVVSACPMEHHPLKTLLQ-INNGEYAPMRHLSDLEQP-----RQQLPQAFRPNGAIYINDTASLIANNC----- 191 (228)
T ss_dssp CTTTCCCEEEEEECSSCTTSCEEE-CC--CEEESSCHHHHTCC-----GGGSCCEEEEEEEEEEEEHHHHHHHTS-----
T ss_pred HhcCCCEEEEEEecCCCcceeeEE-cCCCcEeeccccccccCC-----cccCchhheeeeEEEEEeHHHHhhCCc-----
Confidence 233456666665554423333332 3345542 334221 110 111112234589999999888765421
Q ss_pred cccccCCCcCCCcceehhHHHhhhHhhhcccceeEeecCccccccCCchhHHHHHHHHH
Q 012172 315 MEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLY 373 (469)
Q Consensus 315 lp~~~n~K~~~g~~~iqle~~~~d~~~~~~~~~~v~v~r~eF~pVKn~~dL~~~~~~~~ 373 (469)
++ + .++..+.++...+.-|.+..|+..++..+.
T Consensus 192 --~~------------------g------~~v~~~~~~~~~~~dIdtpeDl~~a~~~l~ 224 (228)
T 1ezi_A 192 --FF------------------I------APTKLYIMSHQDSIDIDTELDLQQAENILN 224 (228)
T ss_dssp --SC------------------C------SSCEEEECCTGGGCCCCSHHHHHHHHHHHC
T ss_pred --cc------------------C------CceEEEEeCcccccCCCCHHHHHHHHHHHH
Confidence 00 1 223445555567899999999999887653
No 39
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=99.11 E-value=5.9e-10 Score=106.07 Aligned_cols=217 Identities=9% Similarity=0.062 Sum_probs=122.8
Q ss_pred ceeEEEEcCCCCCcCCCCCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCCCCceE
Q 012172 79 KLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIH 158 (469)
Q Consensus 79 k~avviLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~~~~i~ 158 (469)
++.+||||||.||||+ +|.|+++ .|+||++|+++++.+... --.+++-| .++.+.++++++ .+.
T Consensus 3 ~~~aiIlA~G~s~R~~---~K~l~~i-~Gkpli~~~i~~~~~~~~----~~~ivv~~---~~~~i~~~~~~~-----g~~ 66 (229)
T 1qwj_A 3 HLAALVLARGGSKGIP---LKNIKRL-AGVPLIGWVLRAALDAGV----FQSVWVST---DHDEIENVAKQF-----GAQ 66 (229)
T ss_dssp CEEEEEECCSCCSSSS---CTTTSEE-TTEEHHHHHHHHHHHHTC----CSEEEEEE---SCHHHHHHHHHT-----TCE
T ss_pred cEEEEEEcCCCCCCCC---CcccceE-CCEEHHHHHHHHHHhCCC----cCEEEEEC---ChHHHHHHHHHc-----CCE
Confidence 5788999999999996 5999999 999999999999988642 01345544 356777777653 234
Q ss_pred EEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCcc-ccccccH-HHHHHH
Q 012172 159 TFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDN-LGAIVDL-KILNHL 236 (469)
Q Consensus 159 ~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DN-L~~~~dp-~~Lg~~ 236 (469)
++.+... + ....+.|.+.+..++. .+ .+.++++++++|+ |....+. .++..+
T Consensus 67 ~~~~~~~----------~--------~~~~~~~~~~v~~al~------~~--~~~d~vlv~~~D~Pli~~~~i~~l~~~~ 120 (229)
T 1qwj_A 67 VHRRSSE----------T--------SKDSSTSLDAIVEFLN------YH--NEVDIVGNIQATSPCLHPTDLQKVAEMI 120 (229)
T ss_dssp EEECCGG----------G--------SSTTCCHHHHHHHHHT------TC--TTCSEEEEECTTCTTCCHHHHHHHHHHH
T ss_pred EEeChhh----------h--------cCCCCcHHHHHHHHHH------hc--CCCCEEEEecCCCCcCCHHHHHHHHHHH
Confidence 3444310 0 0001122222222221 11 1457999999999 7765443 445555
Q ss_pred HHcCCcceEEEeeeccCCCcceEEEEeCCeeEEEEeccCChhh-hhhccccccccEEEEEeEEEeHHHHHHHHHhccccc
Q 012172 237 IQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEH-VNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKM 315 (469)
Q Consensus 237 ~~~~~~~~~~v~~k~~~~~~~G~iv~~~g~~~ivEy~~~~~e~-~~~~~~~~~~~~~Nt~~~~~~l~~L~~~l~~~~~~l 315 (469)
.+.+++..+.++ +...+..+++ . +|...+.+ ++.+... ....+........|+|.|+++.+.| +.
T Consensus 121 ~~~~~~~~~~~~-~~~~p~~~~v--~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~n~giY~~~~~~l---~~------ 186 (229)
T 1qwj_A 121 REEGYDSVFSVV-RRHQFRWSEI--Q-KGVREVTE-PLNLNPAKRPRRQDWDGELYENGSFYFAKRHLI---EM------ 186 (229)
T ss_dssp HSSCCSEEEEEE-EECCCEECCC--C-SSTTCCCC-BSSSBTTBCCCTTTSCCEEEEEEEEEEEEHHHH---HT------
T ss_pred HhCCCCEEEEEe-eccChhHhhc--c-cccccccc-ccccccccccCCCCCCceEEEeeEEEEEEHHHh---cc------
Confidence 555666666555 3333444443 1 22111111 1111110 0000111223356999999998877 11
Q ss_pred ccccCCCcCCCcceehhHHHhhhHhhhcccceeE-eecCccccccCCchhHHHHHHHHHHh
Q 012172 316 EIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGC-NVHRSRFLPVKATSDLLLVQSDLYTL 375 (469)
Q Consensus 316 p~~~n~K~~~g~~~iqle~~~~d~~~~~~~~~~v-~v~r~eF~pVKn~~dL~~~~~~~~~l 375 (469)
.+.+.+ ...+ .++..++..|++..|+..++..+..+
T Consensus 187 -~~~~g~-----------------------~~~~~~~~~~~~~dIdt~~Dl~~a~~~~~~~ 223 (229)
T 1qwj_A 187 -GYLQGG-----------------------KMAYYEMRAEHSVDIDVDIDWPIAEQRVLRF 223 (229)
T ss_dssp -TCSSCS-----------------------SEEEEECCGGGCCCHHHHCSHHHHHHHHHHH
T ss_pred -ccccCC-----------------------eEEEEECCcccccCCCCHHHHHHHHHHHHHh
Confidence 111111 1123 44556889999999999999887655
No 40
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=99.02 E-value=1.5e-09 Score=109.77 Aligned_cols=186 Identities=14% Similarity=0.141 Sum_probs=106.1
Q ss_pred eeEEEEcCCCCCcCC----CCCCccccccCCC-CchHHHHHHHHHHh-hhhcCCcccEEEecCCCChHHHHHHHHHhcCC
Q 012172 80 LVVLKLNGGLGTTMG----CTGPKSVIEVRNG-LTFLDLIVIQIENL-NAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKS 153 (469)
Q Consensus 80 ~avviLAGG~GTRmg----~~~PK~l~~v~~g-ks~L~~~~~~i~~l-~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~ 153 (469)
+.+||||||.||||+ ...||.++++ .| +|||++.++++..+ .-. .+++.|++...+.+.+++...
T Consensus 2 m~~VILAgG~GtRl~Pls~~~~pK~ll~l-~g~~pli~~~l~~l~~~~~~~-----~iivvt~~~~~~~i~~~l~~~--- 72 (336)
T 2x65_A 2 MKALILAGGSGERFWPLSTPETPKQFLKL-FGNKSLMRWTFERVLEEMDPK-----DVIVVTHKDYVERTKKELPEL--- 72 (336)
T ss_dssp CEEEEECCCBCGGGTTTSCTTCBGGGCCC-BTTBCHHHHHHHHHHTTCCGG-----GEEEEEEGGGHHHHHHHCTTS---
T ss_pred eEEEEECCCCCccCCCCcCCCCCceEEEC-CCCCcHHHHHHHHHhccCCCC-----cEEEEcChHHHHHHHHHhhcc---
Confidence 357899999999998 5689999999 66 99999999999876 221 344444542233455544321
Q ss_pred CCceEEEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCcccccc-ccH-H
Q 012172 154 NVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDNLGAI-VDL-K 231 (469)
Q Consensus 154 ~~~i~~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DNL~~~-~dp-~ 231 (469)
+ ...++.|. .|.|+|++...... . . ..-++++|+++|.+... .+. .
T Consensus 73 ~-~~~ii~e~------------------------~~~gta~ai~~a~~-----~-~-~~~~~~lvl~~D~~~~~~~~~~~ 120 (336)
T 2x65_A 73 P-DENIIAEP------------------------MKKNTAPACFIGTK-----L-A-DDDEPVLVLPADHRIPDTKKFWK 120 (336)
T ss_dssp C-GGGEEEES------------------------SCCCHHHHHHHHHT-----T-S-CTTCEEEEEETTCBCCCHHHHHH
T ss_pred c-cceEEeCC------------------------CCCCcHHHHHHHHH-----h-h-CCCCEEEEEcCCceeccHHHHHH
Confidence 1 11112221 24677776432211 1 1 12368999999995432 121 1
Q ss_pred HHH----HHHHcCCcceEEEeeeccCCCcceEEEEeC------Cee-EEEEeccCChhhhhhccccccccEEEEEeEEEe
Q 012172 232 ILN----HLIQNKNEYCMEVTPKTLADVKGGTLISYE------GKV-QLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVN 300 (469)
Q Consensus 232 ~Lg----~~~~~~~~~~~~v~~k~~~~~~~G~iv~~~------g~~-~ivEy~~~~~e~~~~~~~~~~~~~~Nt~~~~~~ 300 (469)
++. ++.+.+...++. +..+.+..+||.+...+ +++ .++|-.+.+.. +.+-. ...-+.|+|+|+|+
T Consensus 121 ~l~~~~~~~~~~~~~vt~~-i~p~~~~~~yG~I~~~~~~~~~~~~V~~f~EKp~~~~a--~~~~~-~g~y~~n~Giy~~~ 196 (336)
T 2x65_A 121 TVKKALDALEKYDGLFTFG-IVPTRPETGYGYIEIGEELEEGVHKVAQFREKPDLETA--KKFVE-SGRFLWNSGMFLWK 196 (336)
T ss_dssp HHHHHHHHHHHHCSEEEEE-ECCCSCCSSSEEEEEEEEEETTEEEEEEEEESCCHHHH--HHHHH-HTCEEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCeEEEE-eecccCCCCceEEEECCccCCCccEEEEEEECCChHHH--HHHHh-cCCeEEEeeeEEEE
Confidence 222 233335433333 33445567899886532 444 36664332211 11100 11236799999999
Q ss_pred HHHHHHHHHh
Q 012172 301 LKAIKRLVEA 310 (469)
Q Consensus 301 l~~L~~~l~~ 310 (469)
.+.+.+.+++
T Consensus 197 ~~~ll~~l~~ 206 (336)
T 2x65_A 197 AREFIEEVKV 206 (336)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9988666654
No 41
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=99.01 E-value=7.9e-09 Score=99.04 Aligned_cols=216 Identities=14% Similarity=0.157 Sum_probs=118.0
Q ss_pred ceeEEEEcCCCCCcCCCCCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCCCCceE
Q 012172 79 KLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIH 158 (469)
Q Consensus 79 k~avviLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~~~~i~ 158 (469)
++++||||||.|||||++.||.++++ .|+||++|.++.+.+... --.+++.+++...+.+++++.. .+.
T Consensus 7 ~~~aIIlAaG~g~Rmg~~~~K~l~~l-~Gkpll~~~l~~~~~~~~----~~~ivVv~~~~~~~~~~~~~~~------~v~ 75 (231)
T 3q80_A 7 EVVAIVPAAGSGERLAVGVPKAFYQL-DGQTLIERAVDGLLDSGV----VDTVVVAVPADRTDEARQILGH------RAM 75 (231)
T ss_dssp CEEEEEECCCCCTTTCSSSCGGGCEE-TTEEHHHHHHHHHHHTSC----CCEEEEEECGGGHHHHHHHHGG------GCE
T ss_pred ceEEEEECCCCCccCCCCCCceEEEE-CCeEHHHHHHHHHHhCCC----CCeEEEECChHHHHHHHHHhcC------CeE
Confidence 68899999999999999999999999 999999999999987631 0134454454222444444421 222
Q ss_pred EEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHH-cCCcEEEEEeCcc-ccccccH-HHHHH
Q 012172 159 TFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALIS-QGKEYVFAANSDN-LGAIVDL-KILNH 235 (469)
Q Consensus 159 ~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~-~G~~~v~v~n~DN-L~~~~dp-~~Lg~ 235 (469)
++..+.-+ ...++.+|. .+.. ...++++|+.+|. |...... .++..
T Consensus 76 ~v~gg~~r-------------------------~~sv~~gl~------~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~ 124 (231)
T 3q80_A 76 IVAGGSNR-------------------------TDTVNLALT------VLSGTAEPEFVLVHDAARALTPPALVARVVEA 124 (231)
T ss_dssp EEECCSSH-------------------------HHHHHHHHG------GGC---CCSEEEECCTTCTTCCHHHHHHHHHH
T ss_pred EEcCCCch-------------------------HHHHHHHHH------HhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHH
Confidence 22111000 011222221 1111 1257999999999 8765432 22333
Q ss_pred HHHcCCcceEEEeeeccCCCcceEEEEeCCee-EEEEeccCChhhhhhccccccccEEEEEeEEEeHHHHHHHHHhcccc
Q 012172 236 LIQNKNEYCMEVTPKTLADVKGGTLISYEGKV-QLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALK 314 (469)
Q Consensus 236 ~~~~~~~~~~~v~~k~~~~~~~G~iv~~~g~~-~ivEy~~~~~e~~~~~~~~~~~~~~Nt~~~~~~l~~L~~~l~~~~~~ 314 (469)
+. .+.+.++-+++-.++ - +. +..+|.+ .++| ...+...+|- .+|+.+.|.+.+++
T Consensus 125 ~~-~~~~~~i~~~p~~dt-~--~~-~~~~g~v~~~~~--------------r~~l~~~qTP-q~F~~~~L~~a~~~---- 180 (231)
T 3q80_A 125 LR-DGYAAVVPVLPLSDT-I--KA-VDANGVVLGTPE--------------RAGLRAVQTP-QGFTTDLLLRSYQR---- 180 (231)
T ss_dssp HH-TTCSEEEEEECCSSC-E--EE-ECTTSBEEECCC--------------GGGEEEECSC-EEEEHHHHHHHHHH----
T ss_pred Hh-hcCCeEEEEEeccCC-E--EE-EcCCCcEEEecc--------------hhheEEEcCC-cEEEHHHHHHHHHH----
Confidence 32 224444444443332 1 11 1223443 1221 1345556774 89999999999875
Q ss_pred cccccCCCcCCCcc---eehhHHHhhhHhhhcccceeEeecCccccccCCchhHHHHHHHH
Q 012172 315 MEIIPNPKEVDGIK---VLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDL 372 (469)
Q Consensus 315 lp~~~n~K~~~g~~---~iqle~~~~d~~~~~~~~~~v~v~r~eF~pVKn~~dL~~~~~~~ 372 (469)
..++| . +.+ ..++-...| .++..++.+ .+-..|+++.||..+++.+
T Consensus 181 ---~~~~n-~-~~~~TD~~~~~~~~g------~~v~~v~g~-~~n~kIt~p~Dl~~ae~~l 229 (231)
T 3q80_A 181 ---GSLDL-P-AAEYTDDASLVEHIG------GQVQVVDGD-PLAFKITTKLDLLLAQAIV 229 (231)
T ss_dssp ---HTC-------CCSSSHHHHHHTT------CCCEEEECC-GGGCCCCSHHHHHHHHHHH
T ss_pred ---HHhhc-C-CCCCCcHHHHHHHcC------CcEEEEECC-ccccCcCCHHHHHHHHHHh
Confidence 33322 1 111 111111112 334444433 3557899999999998765
No 42
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=98.90 E-value=5.2e-09 Score=105.82 Aligned_cols=185 Identities=12% Similarity=0.122 Sum_probs=103.4
Q ss_pred ceeEEEEcCCCCCcCC----CCCCccccccCCC-CchHHHHHHHHHHh-hhhcCCcccEEEecCCCChHHHHHHHHHhcC
Q 012172 79 KLVVLKLNGGLGTTMG----CTGPKSVIEVRNG-LTFLDLIVIQIENL-NAKYGCNVPLLLMNSFNTHDDTSKIIEKYSK 152 (469)
Q Consensus 79 k~avviLAGG~GTRmg----~~~PK~l~~v~~g-ks~L~~~~~~i~~l-~~~~~~~iplviMtS~~t~e~t~~~~~~~~g 152 (469)
++.+||||||.||||. ...||.++++ .| +|||++.++++..+ .-. .+++.|++...+.+ +++.+
T Consensus 2 ~m~~VILAgG~GtRl~Pls~~~~pK~ll~l-~G~~pli~~~l~~l~~~~~~~-----~iiVvt~~~~~~~i----~~~l~ 71 (337)
T 2cu2_A 2 KTYALVMAGGRGERLWPLSREDRPKPFLPL-FEGKTLLEATLERLAPLVPPE-----RTLLAVRRDQEAVA----RPYAD 71 (337)
T ss_dssp CEEEEEECCCCCGGGTTTCBTTBCGGGCBC-GGGCBHHHHHHHHHTTTSCGG-----GEEEEEEGGGHHHH----GGGCS
T ss_pred CeEEEEEcCCCcccCCccCCCCCCceEEEc-CCCChHHHHHHHHHhCcCCCC-----CEEEEcChHHHHHH----HHHhc
Confidence 4678999999999997 5679999999 66 99999999999876 222 34444444112223 33222
Q ss_pred CCCceEEEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCcccccc-ccH-
Q 012172 153 SNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDNLGAI-VDL- 230 (469)
Q Consensus 153 ~~~~i~~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DNL~~~-~dp- 230 (469)
. ..+ +.| ..|.|+|.+...... +.. ..+-++++|+++|.+... .+.
T Consensus 72 ~-~~~--i~e------------------------~~~~gta~ai~~a~~---l~~--~~~~~~~lvl~~D~~~~~~~~~~ 119 (337)
T 2cu2_A 72 G-IRL--LLE------------------------PLGRDTAGAVLLGVA---EAL--KEGAERLLVLPADHYVGDDEAYR 119 (337)
T ss_dssp S-SEE--EEE------------------------SSCCHHHHHHHHHHH---HHH--HHTCSEEEEEESSCEESCHHHHH
T ss_pred c-Cce--Eec------------------------CCCCCcHHHHHHHHH---Hhc--cCCCCEEEEEECCccCCCHHHHH
Confidence 1 011 111 124567765432211 211 113579999999994432 121
Q ss_pred HHHHHHH---HcCCcceEEEeeeccCCCcceEEEEe-C----Cee-EEEEeccCChhhhhhccccccccEEEEEeEEEeH
Q 012172 231 KILNHLI---QNKNEYCMEVTPKTLADVKGGTLISY-E----GKV-QLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNL 301 (469)
Q Consensus 231 ~~Lg~~~---~~~~~~~~~v~~k~~~~~~~G~iv~~-~----g~~-~ivEy~~~~~e~~~~~~~~~~~~~~Nt~~~~~~l 301 (469)
..+..+. ..+..+++. +..+.++.+||.+... + +++ .++|..+.+ ....+-. .. .+.|+|+|+|+.
T Consensus 120 ~~l~~~~~~~~~~~~vt~~-i~p~~~~t~yG~I~~~~~~~~~~~V~~f~EKp~~~--~a~~~~~-~g-~~~n~Giy~f~~ 194 (337)
T 2cu2_A 120 EALATMLEAAEEGFVVALG-LRPTRPETEYGYIRLGPREGAWYRGEGFVEKPSYA--EALEYIR-KG-YVWNGGVFAFAP 194 (337)
T ss_dssp HHHHHHHHHCCTTCEEEEE-ECCSSCCSSSCEEEEEEEETTEEEEEEEECCCCHH--HHHHHHH-TT-CEEEEEEEEECH
T ss_pred HHHHHHHHHHHcCCeEEEe-eccCCCCCCceEEEECCcccccCeEEEEEeCCChH--HHHHHhh-cC-CEEEEEEEEEeH
Confidence 1232222 123322333 3344566789988653 2 444 355533221 1111111 12 468999999999
Q ss_pred HHHHHHHHh
Q 012172 302 KAIKRLVEA 310 (469)
Q Consensus 302 ~~L~~~l~~ 310 (469)
+.+.+.+++
T Consensus 195 ~~ll~~l~~ 203 (337)
T 2cu2_A 195 ATMAELFRR 203 (337)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 988666654
No 43
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=98.88 E-value=3.1e-08 Score=92.87 Aligned_cols=43 Identities=16% Similarity=0.309 Sum_probs=39.5
Q ss_pred ceeEEEEcCCCCCcCCCCCCccccccCCCCchHHHHHHHHHHhh
Q 012172 79 KLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLN 122 (469)
Q Consensus 79 k~avviLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l~ 122 (469)
++.+||||||.||||+...||.++++ .|+||+++.++++....
T Consensus 2 ~~~~vIlA~G~g~R~~~~~~K~l~~~-~g~pli~~~l~~l~~~~ 44 (223)
T 2xwl_A 2 ATVAVVPAAGSGERLRAGRPKAFVTL-GGTPLLEHALSGLRASG 44 (223)
T ss_dssp CEEEEEECCCCCGGGTSSSCGGGSEE-TTEEHHHHHHHHHHHHS
T ss_pred ceEEEEECCccCcccCCCCCCeeeEE-CCeEHHHHHHHHHhcCC
Confidence 57889999999999997789999999 89999999999998764
No 44
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=98.87 E-value=4.5e-08 Score=92.83 Aligned_cols=211 Identities=12% Similarity=0.177 Sum_probs=108.8
Q ss_pred ccceeEEEEcCCCCCcCCCCCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCCCCc
Q 012172 77 LDKLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVE 156 (469)
Q Consensus 77 l~k~avviLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~~~~ 156 (469)
..++.+||||||.|||||.. ||.++++ .|+|+++++++++... -. .+++.| . .++.+.+++.+..+ ..
T Consensus 16 m~~~~~iIlA~G~g~R~~~~-~K~l~~i-~g~pli~~~l~~l~~~-~~-----~i~vv~-~-~~~~~~~~~~~~~~--~~ 83 (232)
T 2xme_A 16 IKLMKAVILAAGLGTRLGGV-PKPLVRV-GGCEIILRTMKLLSPH-VS-----EFIIVA-S-RYADDIDAFLKDKG--FN 83 (232)
T ss_dssp CCCEEEEEEECC------CC-CGGGCEE-TTEEHHHHHHHHHGGG-EE-----EEEEEE-S-TTHHHHHHHHTTSC--CC
T ss_pred cccceEEEECCcCcCcCCCC-CcEEeEE-CCEEHHHHHHHHHHHh-CC-----EEEEEe-C-ChHHHHHHHHHhcC--Cc
Confidence 44688999999999999855 9999999 9999999999998765 21 344444 3 45666666533211 13
Q ss_pred eEEEEecCcceecCCCCcccCCCCCCCCcccccCCCcccchhccccchHHHHHHcCCcEEEEEeCccccccccHHHHHHH
Q 012172 157 IHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVDLKILNHL 236 (469)
Q Consensus 157 i~~f~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGd~~~~L~~sg~L~~l~~~G~~~v~v~n~DNL~~~~dp~~Lg~~ 236 (469)
+.++.|... ..|.++.+..... .+ + +.++|.++|+.. ++.++..+
T Consensus 84 ~~~v~~~~~-----------------------~~g~~~~i~~a~~-----~~---~-~~~lv~~~D~p~---~~~~~~~l 128 (232)
T 2xme_A 84 YKIVRHDRP-----------------------EKGNGYSLLVAKN-----HV---E-DRFILTMGDHVY---SQQFIEKA 128 (232)
T ss_dssp EEEEECSCG-----------------------GGCHHHHHHTTGG-----GC---C-SSEEEEETTEEE---CHHHHHHH
T ss_pred EEEEECCCC-----------------------CCCcHHHHHHHHH-----HC---C-CCEEEEcCCccc---CHHHHHHH
Confidence 444433210 1344443322111 11 1 467789999952 45556655
Q ss_pred HHcCCcceEEEeeec---cCCCcceEEEEeCCeeE-EEEeccCChhhhhhccccccccEEEEEeEEEeHHHHHHHHHhcc
Q 012172 237 IQNKNEYCMEVTPKT---LADVKGGTLISYEGKVQ-LLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADA 312 (469)
Q Consensus 237 ~~~~~~~~~~v~~k~---~~~~~~G~iv~~~g~~~-ivEy~~~~~e~~~~~~~~~~~~~~Nt~~~~~~l~~L~~~l~~~~ 312 (469)
++.. . . ++... .+...++.+...+|++. +.|. + ......|+|.++++.+.+.. +.+
T Consensus 129 ~~~~-~--~-~~~~~~~~~~~~~~~~v~~~~g~v~~~~~~---~----------~~~~~~~~g~~~~~~~~~~~-l~~-- 188 (232)
T 2xme_A 129 VRGE-G--V-IADREPRFVDIGEATKIRVEDGRVAKIGKD---L----------REFDCVDTGFFVLDDSIFEH-AEK-- 188 (232)
T ss_dssp TTCC-E--E-EEESSCSSSCTTTSCEEEEETTEEEEEETT---C----------SSCSEEEEEEEEECTTHHHH-HGG--
T ss_pred HhCC-C--c-EEEccccccCCCcceEEEEcCCEEEEeecC---C----------CCcceEEEEEEEECHHHHHH-HHH--
Confidence 5432 1 2 22211 12344566655677653 3321 1 11246799999999887763 332
Q ss_pred cccccccCCCcCCCcceehhHHHhhhHhhhcccceeEeecCccccccCCchhHHHHHH
Q 012172 313 LKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQS 370 (469)
Q Consensus 313 ~~lp~~~n~K~~~g~~~iqle~~~~d~~~~~~~~~~v~v~r~eF~pVKn~~dL~~~~~ 370 (469)
... .++.. +..++ +.. ++.++.++...|.-|++.+|+..+++
T Consensus 189 -----~~~----~g~~~--l~~ll----~~~-~v~~~~~~~~~~~dI~tpeDl~~a~~ 230 (232)
T 2xme_A 189 -----LRD----REEIP--LSEIV----KLA-RLPVTYVDGELWMDVDTKEDVRRANR 230 (232)
T ss_dssp -----GTT----SSCCC--HHHHH----HHH-TCBEEECCSCCEEEEECC--------
T ss_pred -----HHh----cChhH--HHHHH----HcC-CEEEEEECCCCEEeCCCHHHHHHHHh
Confidence 111 12222 22322 221 34455666557899999999887654
No 45
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=98.77 E-value=3.2e-08 Score=91.26 Aligned_cols=61 Identities=25% Similarity=0.360 Sum_probs=46.8
Q ss_pred eEEEEcCCCCCcCCCCCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHH
Q 012172 81 VVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEK 149 (469)
Q Consensus 81 avviLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~ 149 (469)
.+||||||.|||||. .||.++++ .|+||++|.++++....- -.+++.|++ .++.+.+++++
T Consensus 2 ~aiIlA~G~s~R~~~-~~K~l~~~-~g~pli~~~l~~l~~~~~-----~~v~vv~~~-~~~~i~~~~~~ 62 (196)
T 3rsb_A 2 DALIMAGGKGTRMGG-VEKPLIKL-CGRCLIDYVVSPLLKSKV-----NNIFIATSP-NTPKTKEYINS 62 (196)
T ss_dssp EEEEEC----CGGGG-SCGGGCEE-TTEEHHHHHHHHHHSSSC-----CCEEEECCT-TCHHHHHHHHH
T ss_pred EEEEECCCCCCcCCC-CCccEEEE-CCEEHHHHHHHHHHHCCC-----CEEEEEeCC-ChHHHHHHHHh
Confidence 578999999999997 89999999 999999999999987641 245666666 46788888876
No 46
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=98.76 E-value=1.7e-07 Score=88.49 Aligned_cols=66 Identities=20% Similarity=0.234 Sum_probs=40.8
Q ss_pred eeEEEEcCCCCCcCCC-CCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHh
Q 012172 80 LVVLKLNGGLGTTMGC-TGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKY 150 (469)
Q Consensus 80 ~avviLAGG~GTRmg~-~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~ 150 (469)
+.+||||||.|||||. +.||.++++ .|+||+++.++++.+... --.+++.|++...+.+.++++++
T Consensus 3 ~~~iIlA~G~g~R~~~~~~~K~l~~i-~g~pli~~~l~~l~~~~~----~~~i~vv~~~~~~~~~~~~~~~~ 69 (236)
T 2vsh_A 3 IYAGILAGGTGTRMGISNLPKQFLEL-GDRPILIHTIEKFVLEPS----IEKIVVGVHGDWVSHAEDLVDKY 69 (236)
T ss_dssp EEEEEEEC-----------CGGGSEE-TTEEHHHHHHHHHHTCTT----CCCEEEEECGGGHHHHHHHHHHH
T ss_pred eEEEEeCCccccccCCCCCCCeeeee-CCccHHHHHHHHHHcCCC----CCeEEEEeCHHHHHHHHHHHHhc
Confidence 5689999999999996 679999999 899999999999887531 01455555553335677777653
No 47
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=98.74 E-value=6.3e-07 Score=84.43 Aligned_cols=65 Identities=22% Similarity=0.282 Sum_probs=40.7
Q ss_pred cceeEEEEcCCCCCcCCCCCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHH
Q 012172 78 DKLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEK 149 (469)
Q Consensus 78 ~k~avviLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~ 149 (469)
.++.+||||||.|||||.+.||.++++ .|+||+++.++++..... --.+++.|++ .++.+.+ +.+
T Consensus 5 ~~~~aiIlA~G~g~R~~~~~~K~l~~~-~gkpli~~~l~~l~~~~~----~~~ivvv~~~-~~~~~~~-~~~ 69 (231)
T 1vgw_A 5 RKNIALIPAAGIGVRFGADKPKQYVEI-GSKTVLEHVLGIFERHEA----VDLTVVVVSP-EDTFADK-VQT 69 (231)
T ss_dssp CCEEEEEECC----------CCSCCEE-TTEEHHHHHHHHHHTCTT----CCEEEEECCT-TCSTHHH-HHH
T ss_pred CceEEEEEcccccccCCCCCCceEeEE-CCeEHHHHHHHHHHcCCC----CCeEEEEECc-cHHHHHH-HHh
Confidence 367899999999999998789999999 899999999999987531 0145555555 3455666 554
No 48
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=98.63 E-value=1.7e-07 Score=85.92 Aligned_cols=60 Identities=15% Similarity=0.240 Sum_probs=46.5
Q ss_pred ceeEEEEcCCCCCcCCCCCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHH
Q 012172 79 KLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKII 147 (469)
Q Consensus 79 k~avviLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~ 147 (469)
++.+||||||.||||| .||.++++ .|+|++++.++++....- -.+++.|++ ..+.+.+++
T Consensus 5 ~~~~iIlA~G~~~R~g--~~K~l~~~-~g~pli~~~l~~l~~~~~-----~~i~vv~~~-~~~~~~~~~ 64 (199)
T 2waw_A 5 RVTGVVLAAGYSRRLG--TPKQLLPL-GDTTLLGATLAMARRCPF-----DQLIVTLGG-AADEVLEKV 64 (199)
T ss_dssp CEEEEEEESSCCTTTT--SCGGGCEE-TTEEHHHHHHHHHHTSSC-----SEEEEEECT-THHHHHHHS
T ss_pred ceEEEEECCCCCCCCC--CCEEeCEe-CccCHHHHHHHHHHhCCC-----CcEEEEeCC-CHHHHHHHh
Confidence 5789999999999998 79999999 999999999999987631 145555554 445555444
No 49
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=98.50 E-value=3.5e-07 Score=86.96 Aligned_cols=42 Identities=17% Similarity=0.395 Sum_probs=35.5
Q ss_pred ceeEEEEcCCC---CCcCCCCCCccccccCCCCchHHHHHHHHHHhh
Q 012172 79 KLVVLKLNGGL---GTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLN 122 (469)
Q Consensus 79 k~avviLAGG~---GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l~ 122 (469)
++.+||||||+ |+||| ..||.|+++ .|+||++++++++....
T Consensus 2 ~~~~vIlAaG~tRl~~r~~-~~~K~l~~i-~g~pll~~~l~~l~~~~ 46 (232)
T 2dpw_A 2 RPSAIVLAGGKEAWAERFG-VGSKALVPY-RGRPMVEWVLEALYAAG 46 (232)
T ss_dssp CCEEEEECCCBCSGGGTTT-CSBGGGSEE-TTEETHHHHHHHHHHTT
T ss_pred ceeEEEECCCCCccccccC-CCCceeeEE-CCEEHHHHHHHHHHhcC
Confidence 46789999999 55554 369999999 99999999999998764
No 50
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=98.48 E-value=4.5e-07 Score=83.09 Aligned_cols=60 Identities=15% Similarity=0.173 Sum_probs=46.4
Q ss_pred ceeEEEEcCCCCCcCCCCCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHH
Q 012172 79 KLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKII 147 (469)
Q Consensus 79 k~avviLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~ 147 (469)
++.+||||||.||||| .||.++++ .|+|++++.++++....- -.+++.|++ ..+.+.+++
T Consensus 5 ~~~~iIlA~G~~~R~g--~~K~l~~~-~g~pll~~~l~~l~~~~~-----~~i~vv~~~-~~~~~~~~~ 64 (197)
T 2wee_A 5 QITGVVLAAGRSNRLG--TPKQLLPY-RDTTVLGATLDVARQAGF-----DQLILTLGG-AASAVRAAM 64 (197)
T ss_dssp EEEEEEEECCCCTTTS--SCGGGSEE-TTEEHHHHHHHHHHHTTC-----SEEEEEECT-THHHHHHHS
T ss_pred ceEEEEECCCCcccCC--CCeEcCee-CCccHHHHHHHHHHhcCC-----CcEEEEeCC-CHHHHHHHh
Confidence 5789999999999997 79999999 999999999999987641 144555555 445555444
No 51
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=98.40 E-value=3.7e-07 Score=84.69 Aligned_cols=40 Identities=18% Similarity=0.282 Sum_probs=36.2
Q ss_pred ceeEEEEcCCCCCcCCCCCCccccccCCCCchHHHHHHHHHHh
Q 012172 79 KLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENL 121 (469)
Q Consensus 79 k~avviLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l 121 (469)
++.+||||||.|||||. ||.++++ .|+||++++++++...
T Consensus 2 ~~~~iIlAgG~g~Rmg~--~K~l~~i-~g~pll~~~l~~l~~~ 41 (197)
T 3d5n_A 2 NIGVIILAAGEGKRFGG--DKLLAKI-DNTPIIMRTIRIYGDL 41 (197)
T ss_dssp CEEEEEECSCCTTCCCS--SGGGSBS-SSSBHHHHHHHHTTTS
T ss_pred ceEEEEECCcCcccCCC--CeeeCEe-CceEHHHHHHHHHHhC
Confidence 46789999999999985 9999999 9999999999988654
No 52
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=98.28 E-value=5.3e-07 Score=84.87 Aligned_cols=42 Identities=24% Similarity=0.349 Sum_probs=32.8
Q ss_pred ceeEEEEcCCCCCcCCCCCCccccccCCCCchHHHHHHHHHHh
Q 012172 79 KLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENL 121 (469)
Q Consensus 79 k~avviLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l 121 (469)
++.+||||||.|||||++.||.++++ .|+|+++|.++++.+.
T Consensus 4 ~~~aiIlAaG~g~R~~~~~~K~l~~i-~g~pli~~~l~~l~~~ 45 (228)
T 2yc3_A 4 SVSVILLAGGQGKRMKMSMPKQYIPL-LGQPIALYSFFTFSRM 45 (228)
T ss_dssp CEEEEEECCCCC-------CGGGSEE-TTEEHHHHHHHHHHHC
T ss_pred ceEEEEECCccccccCCCCCccEeEE-CCEEHHHHHHHHHHcC
Confidence 57899999999999998889999999 9999999999999876
No 53
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=98.27 E-value=3.7e-06 Score=78.26 Aligned_cols=41 Identities=22% Similarity=0.353 Sum_probs=37.4
Q ss_pred cceeEEEEcCCCCCcCCCCCCccccccCCCCchHHHHHHHHHH
Q 012172 78 DKLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIEN 120 (469)
Q Consensus 78 ~k~avviLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~ 120 (469)
.++.+||||||.||||| ..||.++++ .|+|++++.++++..
T Consensus 5 m~~~~iILAgG~s~Rmg-~~~K~ll~i-~G~pli~~~l~~l~~ 45 (201)
T 1e5k_A 5 TTITGVVLAGGKARRMG-GVDKGLLEL-NGKPLWQHVADALMT 45 (201)
T ss_dssp CSEEEEEECCCCCSSSC-SSCGGGSEE-TTEEHHHHHHHHHHH
T ss_pred CcceEEEEcCCCCCcCC-CCCCceeeE-CceeHHHHHHHHHHh
Confidence 36889999999999999 579999999 999999999999874
No 54
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=98.24 E-value=3.9e-06 Score=78.83 Aligned_cols=39 Identities=21% Similarity=0.422 Sum_probs=35.5
Q ss_pred eeEEEEcCCCCCcCCCCCCccccccCCCCchHHHHHHHHHHh
Q 012172 80 LVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENL 121 (469)
Q Consensus 80 ~avviLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l 121 (469)
+.+||||||+||||| .||.++++ .|+||++++++++...
T Consensus 1 m~aiILAgG~s~Rmg--~~K~ll~~-~G~pli~~~~~~l~~~ 39 (208)
T 3ngw_A 1 MKVAVLVGGVGRRIG--MEKTEVML-CGKKLIEWVLEKYSPF 39 (208)
T ss_dssp CEEEEECCCCCTTTT--SCGGGCEE-TTEEHHHHHHHHHTTS
T ss_pred CEEEEECCCchhhCC--CCCcccEE-CCeeHHHHHHHHhcCC
Confidence 368999999999999 79999999 9999999999998654
No 55
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=98.21 E-value=4.8e-07 Score=85.55 Aligned_cols=43 Identities=21% Similarity=0.319 Sum_probs=39.5
Q ss_pred ceeEEEEcCCCCCcCCCCCCccccccCCCCchHHHHHHHHHHhh
Q 012172 79 KLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLN 122 (469)
Q Consensus 79 k~avviLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l~ 122 (469)
.+.+||||||.|||||++.||.|+++ .|+||+++.++++....
T Consensus 13 ~~~aiILAaG~s~Rm~~~~~K~l~~i-~Gkpli~~~i~~l~~~~ 55 (234)
T 1vpa_A 13 MNVAILLAAGKGERMSENVPKQFLEI-EGRMLFEYPLSTFLKSE 55 (234)
T ss_dssp CEEEEEEECCCCGGGCCSSCGGGCEE-TTEETTHHHHHHHHHCT
T ss_pred cCeEEEEcCcchhhcCCCCCceEEEE-CCeEHHHHHHHHHHcCC
Confidence 57889999999999998889999999 99999999999998753
No 56
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=98.13 E-value=1.1e-06 Score=83.32 Aligned_cols=62 Identities=15% Similarity=0.149 Sum_probs=47.2
Q ss_pred cceeEEEEcCCCCCcCCCCCCccccccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHH
Q 012172 78 DKLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSK 145 (469)
Q Consensus 78 ~k~avviLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~ 145 (469)
.++.+||||||.|||||.+.||.++++ .|+||+++.++++..... --.+++.|++ .++.+.+
T Consensus 6 ~~~~~iIlA~G~g~R~~~~~~K~l~~i-~g~pll~~~i~~l~~~~~----~~~ivvv~~~-~~~~~~~ 67 (236)
T 1i52_A 6 LDVCAVVPAAGFGRRMQTECPKQYLSI-GNQTILEHSVHALLAHPR----VKRVVIAISP-GDSRFAQ 67 (236)
T ss_dssp CCEEEEEEECCCCGGGCCSSCGGGSEE-TTEEHHHHHHHHHHTSTT----EEEEEEEECT-TCCSGGG
T ss_pred CceeEEEECCcCccccCCCCCcceeeE-CCEEHHHHHHHHHHhCCC----CCeEEEEeCc-cHHHHHH
Confidence 467899999999999997789999999 999999999999987531 0144555554 3344433
No 57
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=97.93 E-value=4.8e-06 Score=79.32 Aligned_cols=38 Identities=29% Similarity=0.461 Sum_probs=28.6
Q ss_pred cceeEEEEcCCCCCcCCCCCCccccccCCCCchHHHHHHH
Q 012172 78 DKLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQ 117 (469)
Q Consensus 78 ~k~avviLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~ 117 (469)
.++.+||||||.|||||.+ ||.|+++ .|+||+++++++
T Consensus 24 M~~~aiILAgG~s~Rm~~~-~K~l~~i-~gkpli~~~l~~ 61 (236)
T 2px7_A 24 MEVSVLIPAAGNGLRLGRG-PKAFLQV-GGRTLLEWTLAA 61 (236)
T ss_dssp CCCEEEEECCC-------C-CGGGCBC-SSSBHHHHHHHH
T ss_pred CceEEEEEcCCCCccCCCC-CCeEEEE-CCEEHHHHHHHh
Confidence 3578999999999999977 9999999 999999999998
No 58
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=97.90 E-value=3.1e-06 Score=78.62 Aligned_cols=40 Identities=18% Similarity=0.297 Sum_probs=37.2
Q ss_pred ceeEEEEcCCCCCcCCCCCCccccccCCCCchHHHHHHHHHHh
Q 012172 79 KLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENL 121 (469)
Q Consensus 79 k~avviLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l 121 (469)
++.+||||||.||||| .||.++++ .|+|+++++++++...
T Consensus 14 ~~~~iILA~G~g~Rmg--~~K~ll~i-~g~pll~~~l~~l~~~ 53 (201)
T 2e8b_A 14 VNTCYVLAGGKSKRFG--EDKLLYEI-KGKKVIERVYETAKSV 53 (201)
T ss_dssp CCEEEEEEESSCCCCS--TTHHHHHH-HHHHHHHHHHHHHHTT
T ss_pred CceEEEECCCCCccCC--CCcccceE-CceEHHHHHHHHHHHh
Confidence 5789999999999999 79999999 9999999999998775
No 59
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=97.78 E-value=1.3e-05 Score=81.95 Aligned_cols=42 Identities=10% Similarity=0.167 Sum_probs=38.9
Q ss_pred ceeEEEEcCCCCCcCCCCCCccccccCCCCchHHHHHHHHHHh
Q 012172 79 KLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENL 121 (469)
Q Consensus 79 k~avviLAGG~GTRmg~~~PK~l~~v~~gks~L~~~~~~i~~l 121 (469)
++.+||||||.|||||.+.||.++++ .|+|+++|.++++.+.
T Consensus 3 ki~aIILAaG~ssRmg~~~pK~ll~l-~GkPLi~~~l~~l~~~ 44 (371)
T 1w55_A 3 EMSLIMLAAGNSTRFNTKVKKQFLRL-GNDPLWLYATKNLSSF 44 (371)
T ss_dssp CEEEEEECCSCCTTTCSSSCGGGCEE-BTEEHHHHHHHHHHTT
T ss_pred ccEEEEECCCCCccCCCCCCcceEEE-CCeEHHHHHHHHHHcc
Confidence 57899999999999998889999999 9999999999998764
No 60
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=95.40 E-value=0.016 Score=52.92 Aligned_cols=38 Identities=11% Similarity=0.214 Sum_probs=19.4
Q ss_pred EECCCcEEeeeEEEE-------ecCCCceeeCCCCeeecceecCC
Q 012172 429 WFGANITLKGKVTIA-------AKSGEKLEIPDGAVLENKEINGP 466 (469)
Q Consensus 429 ~fg~~V~i~g~~~I~-------~~~~~~~~I~~~s~le~~~v~~~ 466 (469)
++|+++.|+.+|+|. ...|+.+.|.++++|.+++|+.+
T Consensus 74 ~IG~~~~I~~~~~I~~~~~~g~~~Ig~~~~Ig~~~~i~~~~Ig~~ 118 (191)
T 3ixc_A 74 EVGEGTNIQDNTVVHTDSMHGDTVIGKFVTIGHSCILHACTLGNN 118 (191)
T ss_dssp EECTTCEECTTCEECC----CCEEECTTCEECTTCEECSCEECTT
T ss_pred EECCCCEECCCCEEeecCCcCCeEECCCCEECCCCEEECCEECCC
Confidence 555555555555553 23444455555555555555444
No 61
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=94.90 E-value=0.033 Score=50.85 Aligned_cols=34 Identities=29% Similarity=0.408 Sum_probs=17.2
Q ss_pred EeeEEECCCcEEeeeEEEE--ecCCCceeeCCCCee
Q 012172 425 TGDVWFGANITLKGKVTIA--AKSGEKLEIPDGAVL 458 (469)
Q Consensus 425 ~G~v~fg~~V~i~g~~~I~--~~~~~~~~I~~~s~l 458 (469)
.+.|++|++|.|+++|+|. ...|+.++|.++|++
T Consensus 132 ~~~v~IG~~v~IG~~~~I~~gv~IG~~~vIgagsvV 167 (190)
T 3hjj_A 132 GKPVKIGNNVWVGGGAIINPGVSIGDNAVIASGAVV 167 (190)
T ss_dssp ECCEEECTTCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred cCCeEECCCCEECCCCEECCCCEECCCCEECCCCEE
Confidence 3445555555555555554 334444555555554
No 62
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=94.44 E-value=0.012 Score=58.95 Aligned_cols=49 Identities=14% Similarity=0.212 Sum_probs=41.8
Q ss_pred CceEEEeeEEECCCcEEeeeEEEE-ecCCCceeeCCCCeeecceecCCCC
Q 012172 420 DSLKVTGDVWFGANITLKGKVTIA-AKSGEKLEIPDGAVLENKEINGPGD 468 (469)
Q Consensus 420 ~~l~v~G~v~fg~~V~i~g~~~I~-~~~~~~~~I~~~s~le~~~v~~~~~ 468 (469)
.++.|.|.+++|++++|+++|+|. +..++.+.|.++|+|++++|+++.+
T Consensus 76 ~~~~I~g~~~Ig~~~~Ig~~~~I~~~~Ig~~~~I~~~s~I~~s~I~~~~~ 125 (334)
T 2pig_A 76 GNARITQPCTLYNNVRIGDNVWIDRADISDGARISDNVTIQSSSVREECA 125 (334)
T ss_dssp TTCEEESSCEEESSCEECTTCEEESCEEESSCEECTTCEEESCEEESSEE
T ss_pred CCcEEeeeeeECCCcEECCCCEEEeEEEcCCCEEeCCcEEeccEEcCCeE
Confidence 688899999999999999999998 4477779999999999998877654
No 63
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=94.13 E-value=0.048 Score=49.19 Aligned_cols=47 Identities=19% Similarity=0.306 Sum_probs=24.4
Q ss_pred CceEEEee---EEECCCcEEeeeEEEEe-------------cCCCceeeCCCCeeecceecCC
Q 012172 420 DSLKVTGD---VWFGANITLKGKVTIAA-------------KSGEKLEIPDGAVLENKEINGP 466 (469)
Q Consensus 420 ~~l~v~G~---v~fg~~V~i~g~~~I~~-------------~~~~~~~I~~~s~le~~~v~~~ 466 (469)
.+++|.|+ +.+|++|.|+.+|+|.+ ..|+.+.|.++++|.+++|+.+
T Consensus 48 ~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~ 110 (189)
T 3r1w_A 48 PLAVIRGDMHHIRIGARTSVQDGSVLHITHASDYNPGGYPLIIGDDVTIGHQAMLHGCTIGNR 110 (189)
T ss_dssp TTCEEEEEEEEEEECTTCEECTTCEEECBCCSSSSTTCBCEEECSSEEECTTCEEESCEECSS
T ss_pred CCCEEecCCCceEECCCCEECCCCEEecCCcccCCCCCCCeEECCCCEECCCCEEeCcEECCC
Confidence 34455533 36666666666666654 3444455555555555554443
No 64
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=94.07 E-value=0.056 Score=48.29 Aligned_cols=48 Identities=13% Similarity=0.256 Sum_probs=31.0
Q ss_pred CceEEEee---EEECCCcEEeeeEEEEe------cCCCceeeCCCCeeecceecCCC
Q 012172 420 DSLKVTGD---VWFGANITLKGKVTIAA------KSGEKLEIPDGAVLENKEINGPG 467 (469)
Q Consensus 420 ~~l~v~G~---v~fg~~V~i~g~~~I~~------~~~~~~~I~~~s~le~~~v~~~~ 467 (469)
..++|.++ +++|+++.|+.+|+|.+ ..|+.+.|.+++.|.+++|+.+.
T Consensus 41 ~~~~i~~~~~~v~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~~ 97 (173)
T 1xhd_A 41 FNTVIRGDVSPTIIGDRVNVQDQCTLHQSPQYPLILEDDVTVGHQVILHSCHIKKDA 97 (173)
T ss_dssp TTCEEEEEEEEEEECTTCEECTTCEEECCTTCCEEECTTCEECTTCEEESCEECTTC
T ss_pred CCcEEecCCCeEEECCCCEECCCCEEEeCCCCCeEECCCCEECCCCEEeCCEECCCC
Confidence 45566665 77788888877777762 34555666666666666666554
No 65
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=93.73 E-value=0.077 Score=47.37 Aligned_cols=32 Identities=13% Similarity=0.242 Sum_probs=16.1
Q ss_pred eEEECCCcEEeeeEEEEe-cCCCceeeCCCCee
Q 012172 427 DVWFGANITLKGKVTIAA-KSGEKLEIPDGAVL 458 (469)
Q Consensus 427 ~v~fg~~V~i~g~~~I~~-~~~~~~~I~~~s~l 458 (469)
++.+|+++.|+.++.|.. ..|+.+.|.++++|
T Consensus 73 ~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig~~~~i 105 (173)
T 1xhd_A 73 PLILEDDVTVGHQVILHSCHIKKDALIGMGSII 105 (173)
T ss_dssp CEEECTTCEECTTCEEESCEECTTCEECTTCEE
T ss_pred CeEECCCCEECCCCEEeCCEECCCCEEcCCCEE
Confidence 455555555555555542 23444555555544
No 66
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=93.02 E-value=0.091 Score=47.81 Aligned_cols=21 Identities=24% Similarity=0.420 Sum_probs=8.7
Q ss_pred eEEEeeEEECCCcEEeeeEEE
Q 012172 422 LKVTGDVWFGANITLKGKVTI 442 (469)
Q Consensus 422 l~v~G~v~fg~~V~i~g~~~I 442 (469)
+.|.|++.+|+++.|..+|+|
T Consensus 46 ~~i~~~v~IG~~~~I~~~~~I 66 (191)
T 3ixc_A 46 ARIIGDVCIGKNASIWYGTVL 66 (191)
T ss_dssp CEEEEEEEECTTCEECTTCEE
T ss_pred CEEeCCcEECCCCEECCCCEE
Confidence 333444444444444444444
No 67
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=93.00 E-value=0.096 Score=46.81 Aligned_cols=38 Identities=18% Similarity=0.417 Sum_probs=17.9
Q ss_pred EEECCCcEEeeeEEEEe------cCCCceeeCCCCeeecceecC
Q 012172 428 VWFGANITLKGKVTIAA------KSGEKLEIPDGAVLENKEING 465 (469)
Q Consensus 428 v~fg~~V~i~g~~~I~~------~~~~~~~I~~~s~le~~~v~~ 465 (469)
+++|+++.|..+|+|.+ ..|+.+.|.+++.|.+++|+.
T Consensus 50 ~~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~I~~~~~i~~~~Ig~ 93 (173)
T 1v3w_A 50 IYVGKYSNVQDNVSIHTSHGYPTEIGEYVTIGHNAMVHGAKVGN 93 (173)
T ss_dssp EEECTTCEECTTCEEECBTTBCEEECSSCEECTTCEEESCEECS
T ss_pred EEECCCCEECCCcEEEecCCCCeEECCCCEECCCCEECCCEECC
Confidence 55555555555555542 233334444444444444443
No 68
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=92.99 E-value=0.12 Score=47.13 Aligned_cols=25 Identities=28% Similarity=0.383 Sum_probs=19.0
Q ss_pred CceEEEeeEEECCCcEEeeeEEEEe
Q 012172 420 DSLKVTGDVWFGANITLKGKVTIAA 444 (469)
Q Consensus 420 ~~l~v~G~v~fg~~V~i~g~~~I~~ 444 (469)
.+++|.|+|++|+++.|..+|+|.+
T Consensus 23 ~~a~I~g~V~IG~~~~I~~~~~I~~ 47 (194)
T 3tv0_A 23 VESEIRGDVTIGPRTVIHPKARIIA 47 (194)
T ss_dssp TTSEEESSEEECTTCEECTTCEEEE
T ss_pred CCCEEeCCCEECCCCEECCCCEEcc
Confidence 5677777888888888877777764
No 69
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=92.69 E-value=0.11 Score=47.70 Aligned_cols=36 Identities=14% Similarity=0.313 Sum_probs=20.8
Q ss_pred EEeeEEECCCcEEeeeEEEE--ecCCCceeeCCCCeee
Q 012172 424 VTGDVWFGANITLKGKVTIA--AKSGEKLEIPDGAVLE 459 (469)
Q Consensus 424 v~G~v~fg~~V~i~g~~~I~--~~~~~~~~I~~~s~le 459 (469)
+.+.|++|++|.|+++|+|. ...|+.++|.++|++.
T Consensus 129 ~~~~v~IG~~v~IG~~~~I~~gv~IG~~~vIgagsvV~ 166 (195)
T 3nz2_A 129 ICKPIVIEDDVWIGGNVVINQGVTIGARSVVAANSVVN 166 (195)
T ss_dssp EECCEEECTTCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred ecCCeEECCCCEEcCCCEECCCCEECCCCEECCCCEEc
Confidence 44455666666666666664 3455555566666553
No 70
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=92.63 E-value=0.13 Score=47.47 Aligned_cols=47 Identities=15% Similarity=0.196 Sum_probs=34.5
Q ss_pred CceEEEeeEEECCCcEEeeeEEEE-ecCCCceeeCCCCeeecceecCC
Q 012172 420 DSLKVTGDVWFGANITLKGKVTIA-AKSGEKLEIPDGAVLENKEINGP 466 (469)
Q Consensus 420 ~~l~v~G~v~fg~~V~i~g~~~I~-~~~~~~~~I~~~s~le~~~v~~~ 466 (469)
..++|.+.+++|++|.|+.+++|. +..|+.+.|.++|++.+.+|+.+
T Consensus 122 ~~~~I~~~v~Ig~~v~IG~~a~I~~~~Ig~~~~Igags~V~~~~i~~~ 169 (213)
T 3kwd_A 122 HMALIHGPAYIGDGCFIGFRSTVFNARVGAGCVVMMHVLIQDVEIPPG 169 (213)
T ss_dssp TTCEEEEEEEECTTCEECTTCEEEEEEECTTCEECSSCEEESCEECTT
T ss_pred CCcEEcCCCEECCCCEECCCCEEeCcEECCCCEEcCCCEECCcEeCCC
Confidence 566777778888888888877777 44677788888888866555543
No 71
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=92.62 E-value=0.097 Score=47.12 Aligned_cols=14 Identities=14% Similarity=0.280 Sum_probs=6.8
Q ss_pred EECCCcEEeeeEEE
Q 012172 429 WFGANITLKGKVTI 442 (469)
Q Consensus 429 ~fg~~V~i~g~~~I 442 (469)
++|+++.|..+|+|
T Consensus 56 ~IG~~~~I~~~~~I 69 (187)
T 3r3r_A 56 AIGARTNIQDGSVL 69 (187)
T ss_dssp EECTTCEECTTCEE
T ss_pred EECCCCEECCCCEE
Confidence 44444444444444
No 72
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=92.49 E-value=0.14 Score=46.94 Aligned_cols=39 Identities=13% Similarity=0.167 Sum_probs=24.5
Q ss_pred CceEEEeeEEECCCcEEeeeEEEE-----ecCCCceeeCCCCee
Q 012172 420 DSLKVTGDVWFGANITLKGKVTIA-----AKSGEKLEIPDGAVL 458 (469)
Q Consensus 420 ~~l~v~G~v~fg~~V~i~g~~~I~-----~~~~~~~~I~~~s~l 458 (469)
..++|.|++++|++|.|..+|+|. ...|+.+.|.++++|
T Consensus 63 ~~~~I~~~v~IG~~~~I~~~~~I~~~~~~~~IG~~~~Ig~~~~I 106 (205)
T 3vbi_A 63 DFCILSGKVTIGSYSHIAAYTALYGGEVGIEMYDFANISSRTIV 106 (205)
T ss_dssp TTCEEEEEEEECSSEEECTTCEEEEEEEEEEECTTCEECTTCEE
T ss_pred CCCEEccceEECCCCEECCCeEEEcCCccEEECCCCEECCCcEE
Confidence 566667777777777777777774 234455555555555
No 73
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=92.20 E-value=0.12 Score=46.48 Aligned_cols=39 Identities=33% Similarity=0.462 Sum_probs=29.1
Q ss_pred CceEEEeeEEECCCcEEeeeEEEEe-----cCCCceeeCCCCee
Q 012172 420 DSLKVTGDVWFGANITLKGKVTIAA-----KSGEKLEIPDGAVL 458 (469)
Q Consensus 420 ~~l~v~G~v~fg~~V~i~g~~~I~~-----~~~~~~~I~~~s~l 458 (469)
..+.|.|++.+|+++.|..+++|.. ..|+.+.|.++++|
T Consensus 26 ~~~~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I 69 (187)
T 3r3r_A 26 TSSVVIGDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVL 69 (187)
T ss_dssp TTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEE
T ss_pred CCCEEECceEECCCCEECCCcEEEcCCccEEECCCCEECCCCEE
Confidence 4567778888888888888887764 55777777777777
No 74
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=92.20 E-value=0.27 Score=45.04 Aligned_cols=35 Identities=29% Similarity=0.473 Sum_probs=18.6
Q ss_pred EeeEEECCCcEEeeeEEEE--ecCCCceeeCCCCeee
Q 012172 425 TGDVWFGANITLKGKVTIA--AKSGEKLEIPDGAVLE 459 (469)
Q Consensus 425 ~G~v~fg~~V~i~g~~~I~--~~~~~~~~I~~~s~le 459 (469)
.+.|++|++|.|+++|+|. ...|+.++|.++|++.
T Consensus 128 ~~~v~IG~~v~IG~~~~I~~gv~IG~~~vIgagsvV~ 164 (199)
T 3ftt_A 128 AGPIHIGSNTWFGGHVAVLPGVTIGEGSVIGAGSVVT 164 (199)
T ss_dssp ECCEEECSSEEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred cCCeEEcCCcEEcCCCEECCCCEECCCCEECCCCEEC
Confidence 4455555555555555554 3345555555555553
No 75
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=91.98 E-value=0.15 Score=46.49 Aligned_cols=35 Identities=29% Similarity=0.451 Sum_probs=21.1
Q ss_pred EeeEEECCCcEEeeeEEEE--ecCCCceeeCCCCeee
Q 012172 425 TGDVWFGANITLKGKVTIA--AKSGEKLEIPDGAVLE 459 (469)
Q Consensus 425 ~G~v~fg~~V~i~g~~~I~--~~~~~~~~I~~~s~le 459 (469)
.+++++|++|.|+++|+|. ...|+.+.|.++|++.
T Consensus 128 ~~~v~IGd~v~IG~~~~I~~gv~IG~~~vIgagsvV~ 164 (185)
T 2p2o_A 128 GKPVVIGHNVWIGGRAVINPGVTIGDNAVIASGAVVT 164 (185)
T ss_dssp ECCEEECSSCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred cCCeEEcCCeEECCCCEECCCCEECCCCEECCCCEEC
Confidence 4466666666666666665 3455556666666554
No 76
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=91.79 E-value=0.19 Score=46.32 Aligned_cols=40 Identities=23% Similarity=0.308 Sum_probs=26.5
Q ss_pred EEECCCcEEeeeEEEE--ecCCCceeeCCCCeeecceecCCC
Q 012172 428 VWFGANITLKGKVTIA--AKSGEKLEIPDGAVLENKEINGPG 467 (469)
Q Consensus 428 v~fg~~V~i~g~~~I~--~~~~~~~~I~~~s~le~~~v~~~~ 467 (469)
+++|++|.|+.+|.|. ...|+.+.|.+++++.+++|+.+.
T Consensus 112 ~~IG~~v~Ig~~~~I~~~v~Ig~~v~IG~~a~I~~~~Ig~~~ 153 (213)
T 3kwd_A 112 VWIGDNVSITHMALIHGPAYIGDGCFIGFRSTVFNARVGAGC 153 (213)
T ss_dssp EEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEECTTC
T ss_pred eEECCCcEECCCcEEcCCCEECCCCEECCCCEEeCcEECCCC
Confidence 5566666666655555 345667778888888777776654
No 77
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=91.73 E-value=0.05 Score=50.52 Aligned_cols=15 Identities=7% Similarity=-0.024 Sum_probs=11.1
Q ss_pred cccccCCchhHHHHH
Q 012172 355 RFLPVKATSDLLLVQ 369 (469)
Q Consensus 355 eF~pVKn~~dL~~~~ 369 (469)
+..++||+-+|+.++
T Consensus 7 ~~~G~nn~i~l~~~~ 21 (215)
T 2wlg_A 7 SEQGINNTINISTTS 21 (215)
T ss_dssp EEESSSCEEEECTTC
T ss_pred EEeCCCCEEEecCCc
Confidence 567888888877665
No 78
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=91.68 E-value=0.21 Score=47.53 Aligned_cols=24 Identities=21% Similarity=0.343 Sum_probs=14.1
Q ss_pred ceEEEe---eEEECCCcEEeeeEEEEe
Q 012172 421 SLKVTG---DVWFGANITLKGKVTIAA 444 (469)
Q Consensus 421 ~l~v~G---~v~fg~~V~i~g~~~I~~ 444 (469)
.++|.+ ++++|++|.|+.+|+|.+
T Consensus 117 ~~~I~~~~~~~~IG~~~~Ig~~~~I~~ 143 (252)
T 3jqy_B 117 GFEVVTDKCNVTIGHDCMIARDVILRA 143 (252)
T ss_dssp TCEEECSSSEEEECTTCEECSSEEEEC
T ss_pred CcEEEeCCCCeEECCCCEEcCCcEEec
Confidence 444444 666666666666666654
No 79
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=91.66 E-value=0.16 Score=48.61 Aligned_cols=23 Identities=4% Similarity=0.105 Sum_probs=10.9
Q ss_pred ceEEEeeEEECCCcEEeeeEEEE
Q 012172 421 SLKVTGDVWFGANITLKGKVTIA 443 (469)
Q Consensus 421 ~l~v~G~v~fg~~V~i~g~~~I~ 443 (469)
.++|.++|++|+++.|+.+|+|.
T Consensus 32 ~~~I~~~v~Ig~~~~I~~~~~I~ 54 (273)
T 3fs8_A 32 GCIIRDNVHIKKGSFIGARSILG 54 (273)
T ss_dssp TCEECSSEEECTTCEECTTCEEE
T ss_pred CCEECCCCEECCCcEECCCcEeC
Confidence 34444444444444444444444
No 80
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=91.30 E-value=0.13 Score=50.33 Aligned_cols=32 Identities=16% Similarity=0.202 Sum_probs=16.8
Q ss_pred EEECCCcEEeeeEEEE--ecCCCceeeCCCCeee
Q 012172 428 VWFGANITLKGKVTIA--AKSGEKLEIPDGAVLE 459 (469)
Q Consensus 428 v~fg~~V~i~g~~~I~--~~~~~~~~I~~~s~le 459 (469)
+++|+||.|+.+++|. ...|+.+.|.++|++.
T Consensus 217 ~~IGd~v~IGaga~Il~gv~IG~~a~IGagsvV~ 250 (287)
T 3mc4_A 217 PKIRQGVLIGAGAKILGNIQVGQCSKIAAGSVVL 250 (287)
T ss_dssp CEECTTCEECTTCEEESSCEECTTCEECTTCEEC
T ss_pred CEECCCCEECCCCEECCCcEECCCCEECCCCEEc
Confidence 4555555555555554 3345555555555553
No 81
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=91.03 E-value=0.095 Score=50.39 Aligned_cols=40 Identities=13% Similarity=0.195 Sum_probs=26.8
Q ss_pred CceEEEeeEEECCCcEEeeeEEEE---------------ecCCCceeeCCCCeee
Q 012172 420 DSLKVTGDVWFGANITLKGKVTIA---------------AKSGEKLEIPDGAVLE 459 (469)
Q Consensus 420 ~~l~v~G~v~fg~~V~i~g~~~I~---------------~~~~~~~~I~~~s~le 459 (469)
.+++|.|++++|+++.|..+++|. ...|+.+.|.++++|.
T Consensus 45 ~~~~I~g~~~IG~~~~I~~~a~I~~~~~~~~~~g~~~~~v~IG~~~~Ig~~~~I~ 99 (266)
T 3r0s_A 45 QGARILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIGKNATIREFATIN 99 (266)
T ss_dssp TTCEECSSCEECTTCEECTTCEEEECCSCSCCC----CEEEECTTCEECTTCEEE
T ss_pred CCeEEeCCcEECCCcEEccCceeccCCccccccCCcCceEEECCCCEECCceEec
Confidence 567777788888888888777773 3345555555555554
No 82
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=91.02 E-value=0.14 Score=51.62 Aligned_cols=39 Identities=13% Similarity=0.188 Sum_probs=28.6
Q ss_pred ceEEEeeEEECCCcEEeeeEEEE-ecCCCceeeCCCCeeec
Q 012172 421 SLKVTGDVWFGANITLKGKVTIA-AKSGEKLEIPDGAVLEN 460 (469)
Q Consensus 421 ~l~v~G~v~fg~~V~i~g~~~I~-~~~~~~~~I~~~s~le~ 460 (469)
+++| +++++|+++.|+.++.|. +..|+.+.|.+++++.+
T Consensus 292 ~~~i-~~~~i~~~~~i~~~~~i~~~~Ig~~~~Ig~~~~i~~ 331 (401)
T 2ggo_A 292 SVEV-KESVIMEGSKIPHLSYVGDSVIAEDVNFGAGTLIAN 331 (401)
T ss_dssp TCEE-ESEEECTTCEEEESCEEESCEECTTCEECTTCEECC
T ss_pred CCEE-ecCEEcCCcEECCCceEcceEECCCcEECCCcEEcC
Confidence 4445 567778888888888876 44677788888888863
No 83
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=90.99 E-value=0.19 Score=44.75 Aligned_cols=48 Identities=17% Similarity=0.209 Sum_probs=34.7
Q ss_pred CceEEEeeEEECCCcEEeeeEEEEe-----cCCCceeeCCCCeee-----cceecCCC
Q 012172 420 DSLKVTGDVWFGANITLKGKVTIAA-----KSGEKLEIPDGAVLE-----NKEINGPG 467 (469)
Q Consensus 420 ~~l~v~G~v~fg~~V~i~g~~~I~~-----~~~~~~~I~~~s~le-----~~~v~~~~ 467 (469)
.+.++.|++.+|+++.|..+++|.+ ..|+.+.|.++++|. +++|+.+.
T Consensus 21 ~~a~i~g~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~I~~~~~I~~~~~~~~~Ig~~~ 78 (173)
T 1v3w_A 21 ENAVVIGDVVLEEKTSVWPSAVLRGDIEQIYVGKYSNVQDNVSIHTSHGYPTEIGEYV 78 (173)
T ss_dssp TTSEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBTTBCEEECSSC
T ss_pred CCCEEeCCEEECCCCEECCCeEEecCCceEEECCCCEECCCcEEEecCCCCeEECCCC
Confidence 5677788888888888888888764 456667777777776 35666554
No 84
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=90.92 E-value=0.091 Score=49.55 Aligned_cols=47 Identities=15% Similarity=0.191 Sum_probs=29.0
Q ss_pred ceEEEeeEEECCCcEEeeeEEEEe----------cCCCceeeCCCCee-ecceecCCC
Q 012172 421 SLKVTGDVWFGANITLKGKVTIAA----------KSGEKLEIPDGAVL-ENKEINGPG 467 (469)
Q Consensus 421 ~l~v~G~v~fg~~V~i~g~~~I~~----------~~~~~~~I~~~s~l-e~~~v~~~~ 467 (469)
+++|.+++++|++|.|+.+++|.+ ..++.+.|.++++| ++++|+.+.
T Consensus 133 ~~~I~~~~~IG~~~~I~~~~~i~~~~~~~~~~~~~Ig~~~~IG~~~~I~~~~~Ig~~~ 190 (240)
T 3r8y_A 133 NAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVGKGA 190 (240)
T ss_dssp TCEECTTCEECTTCEECTTCEECCCCSCTTSCCCEECTTCEECTTCEECTTCEECTTC
T ss_pred CCEECCCCEECCCcEECCCcEECCCccCCCCCCcEECCCCEECCCCEECCCcEECCCC
Confidence 455556777777777777776643 23455666666666 566665543
No 85
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=90.86 E-value=0.15 Score=49.45 Aligned_cols=31 Identities=13% Similarity=0.160 Sum_probs=14.7
Q ss_pred EEECCCcEEeeeEEEE--ecCCCceeeCCCCee
Q 012172 428 VWFGANITLKGKVTIA--AKSGEKLEIPDGAVL 458 (469)
Q Consensus 428 v~fg~~V~i~g~~~I~--~~~~~~~~I~~~s~l 458 (469)
+++|++|.|+.+++|. ...|+.+.|.++|++
T Consensus 190 ~~IGd~v~IGaga~Il~gv~IG~~a~IGagsvV 222 (267)
T 1ssq_A 190 PKVREGVMIGAGAKILGNIEVGKYAKIGANSVV 222 (267)
T ss_dssp CEECTTCEECTTCEEESSCEECTTCEECTTCEE
T ss_pred eEECCCeEEcCCCEEeCCcEECCCCEECCCCEE
Confidence 4455555555444444 224444555555544
No 86
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=90.60 E-value=0.31 Score=44.26 Aligned_cols=37 Identities=27% Similarity=0.429 Sum_probs=24.6
Q ss_pred EeeEEECCCcEEeeeEEEE--ecCCCceeeCCCCeeecc
Q 012172 425 TGDVWFGANITLKGKVTIA--AKSGEKLEIPDGAVLENK 461 (469)
Q Consensus 425 ~G~v~fg~~V~i~g~~~I~--~~~~~~~~I~~~s~le~~ 461 (469)
.+.+++|++|.|+++|+|. ...|+.++|.++|++...
T Consensus 130 ~~~v~IG~~v~IG~~~~I~~gv~IG~~~vIgagsvV~~d 168 (188)
T 3srt_A 130 GSPVKIGDNVWIGGGVIITPGITIGDNVVIGAGSVVTKD 168 (188)
T ss_dssp ECCEEECSSCEECTTCEECTTCEECSSEEECTTCEECSC
T ss_pred CCCcEECCCcEEcCCCEECCCcEECCCCEECCCCEECcc
Confidence 4567777777777777765 456666677777766544
No 87
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=90.58 E-value=0.24 Score=50.73 Aligned_cols=50 Identities=24% Similarity=0.450 Sum_probs=43.3
Q ss_pred CceEEEeeEEECCCcEEeeeEEEE--ecCCCceeeCCCCeeecceecCCCCC
Q 012172 420 DSLKVTGDVWFGANITLKGKVTIA--AKSGEKLEIPDGAVLENKEINGPGDL 469 (469)
Q Consensus 420 ~~l~v~G~v~fg~~V~i~g~~~I~--~~~~~~~~I~~~s~le~~~v~~~~~~ 469 (469)
....+++++.+|+++.|..+|+|. ...|+.+.|.++++|++++|+.+..|
T Consensus 258 ~~~~i~~~~~ig~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~ig~~~~I 309 (456)
T 2v0h_A 258 ARFDLRGTLEHGKDVEIDVNVIIEGNVKLGDRVKIGTGCVLKNVVIGNDVEI 309 (456)
T ss_dssp GGEEEEEEEEECSSCEECSSEEEEEEEEECTTCEECTTCEEEEEEECTTCEE
T ss_pred CccEEcCceEECCCCEEcCCcEEcCCcEECCCCEECCCCEEEeEEEeCCCEE
Confidence 467889999999999999999996 56888999999999999999887653
No 88
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=90.57 E-value=0.38 Score=45.53 Aligned_cols=45 Identities=13% Similarity=0.132 Sum_probs=29.0
Q ss_pred CceEEEeeEEECCCcEEeeeEEEE-ecCCCceeeCCCCeeecceec
Q 012172 420 DSLKVTGDVWFGANITLKGKVTIA-AKSGEKLEIPDGAVLENKEIN 464 (469)
Q Consensus 420 ~~l~v~G~v~fg~~V~i~g~~~I~-~~~~~~~~I~~~s~le~~~v~ 464 (469)
.+++|.+++++|++|.|+.+++|. +..|+.+.|.++|++.++.|.
T Consensus 151 ~~~~I~~~~~Ig~~v~IG~~a~I~~v~Ig~~~~IgagsvV~~~~I~ 196 (247)
T 1qre_A 151 HQSQVHGPAAVGDDTFIGMQAFVFKSKVGNNCVLEPRSAAIGVTIP 196 (247)
T ss_dssp TTCEEEEEEEECTTCEECTTCEEEEEEECTTCEECTTCEEESCEEC
T ss_pred CCCEEcCCcEECCCCEECCCCEEeceEECCCCEECCCCEECCeEeC
Confidence 456667777777777777766665 345666667777777444443
No 89
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=90.50 E-value=0.17 Score=50.10 Aligned_cols=31 Identities=10% Similarity=0.155 Sum_probs=15.4
Q ss_pred EECCCcEEeeeEEEE--ecCCCceeeCCCCeee
Q 012172 429 WFGANITLKGKVTIA--AKSGEKLEIPDGAVLE 459 (469)
Q Consensus 429 ~fg~~V~i~g~~~I~--~~~~~~~~I~~~s~le 459 (469)
++|+||.|+.+|+|. ...|+.+.|.++|++.
T Consensus 253 ~IGd~V~IGaga~Il~gv~IGd~a~IGagsvV~ 285 (310)
T 3f1x_A 253 ILEDDVIVYSNATILGRVTIGKGATVGGNIWVT 285 (310)
T ss_dssp EECTTCEECTTCEEESSCEECTTCEECSSCEEC
T ss_pred EECCCcEEcCCCEECCCcEECCCCEECCCCEEC
Confidence 455555555555554 2344445555555553
No 90
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=90.50 E-value=0.12 Score=50.88 Aligned_cols=39 Identities=23% Similarity=0.185 Sum_probs=25.4
Q ss_pred CceEEEeeEEECCCcEEeeeEEEE------ecCCCceeeCCCCee
Q 012172 420 DSLKVTGDVWFGANITLKGKVTIA------AKSGEKLEIPDGAVL 458 (469)
Q Consensus 420 ~~l~v~G~v~fg~~V~i~g~~~I~------~~~~~~~~I~~~s~l 458 (469)
.+++|.|++++|+++.|..+++|. ...|+.+.|.++++|
T Consensus 48 ~~~~I~g~~~IG~~~~I~~~a~I~~d~~g~~~IG~~~~Ig~~a~I 92 (305)
T 3t57_A 48 PSSHVFGNTELGESCVLMTGAVVGDELPGYTFIGCNNIIGHHAVV 92 (305)
T ss_dssp TTCEECSSEEECTTCEECTTCEECCSSSEEEEECSSCEECTTCEE
T ss_pred CCcEECCCcEECCCcEEccCcEeccCCCCceEECCceEECCccEe
Confidence 456666677777777777766663 445566666666666
No 91
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=90.48 E-value=0.11 Score=51.96 Aligned_cols=12 Identities=33% Similarity=0.598 Sum_probs=5.3
Q ss_pred CCceeeCCCCee
Q 012172 447 GEKLEIPDGAVL 458 (469)
Q Consensus 447 ~~~~~I~~~s~l 458 (469)
|+.+.|.++++|
T Consensus 167 G~~~~I~~g~~I 178 (341)
T 3eh0_A 167 GQNCLIQSGTVV 178 (341)
T ss_dssp CSSCEECTTCEE
T ss_pred CCccEEcCCcEE
Confidence 334444444444
No 92
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=90.30 E-value=0.21 Score=44.81 Aligned_cols=42 Identities=26% Similarity=0.398 Sum_probs=34.9
Q ss_pred CceEEEeeEEECCCcEEeeeEEEEe-----cCCCceeeCCCCeeecc
Q 012172 420 DSLKVTGDVWFGANITLKGKVTIAA-----KSGEKLEIPDGAVLENK 461 (469)
Q Consensus 420 ~~l~v~G~v~fg~~V~i~g~~~I~~-----~~~~~~~I~~~s~le~~ 461 (469)
....|.+++.+|+++.|..+|+|.+ ..|+.+.|.++++|..+
T Consensus 30 ~~~~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~ 76 (189)
T 3r1w_A 30 RSSVIIGDVELGDDCSVWPLAVIRGDMHHIRIGARTSVQDGSVLHIT 76 (189)
T ss_dssp TTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECB
T ss_pred CCCEEeeeeEECCCCEECCCCEEecCCCceEECCCCEECCCCEEecC
Confidence 5677889999999999999999973 46888888888888765
No 93
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=90.22 E-value=0.14 Score=48.95 Aligned_cols=40 Identities=10% Similarity=0.096 Sum_probs=27.1
Q ss_pred CceEEEeeEEECCCcEEeeeEEEE---------------ecCCCceeeCCCCeee
Q 012172 420 DSLKVTGDVWFGANITLKGKVTIA---------------AKSGEKLEIPDGAVLE 459 (469)
Q Consensus 420 ~~l~v~G~v~fg~~V~i~g~~~I~---------------~~~~~~~~I~~~s~le 459 (469)
.+++|.|++++|+++.|..+++|. ...|+.+.|.++++|.
T Consensus 41 ~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~v~IG~~~~Ig~~~~I~ 95 (259)
T 3hsq_A 41 GHVKICAGSEIGKFNRFHQGAVIGVMPQDLGFNQQLLTKTVIGDHNIFREYSNIH 95 (259)
T ss_dssp TTCEECTTEEECSSCEECTTCEEEECCSCTTCCTTSCCCEEECSSCEECTTCEEE
T ss_pred CCcEEcCCcEECCCcEECCCCEECCCcccccccCccCCcEEECCCcEECCCCEEC
Confidence 567777788888888888888772 2344555566666665
No 94
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=90.19 E-value=0.11 Score=52.22 Aligned_cols=12 Identities=17% Similarity=0.479 Sum_probs=5.2
Q ss_pred CCceeeCCCCee
Q 012172 447 GEKLEIPDGAVL 458 (469)
Q Consensus 447 ~~~~~I~~~s~l 458 (469)
|+.+.|.++++|
T Consensus 172 G~~~~I~~g~~I 183 (357)
T 4e79_A 172 RDRVRIHSSTVI 183 (357)
T ss_dssp CSSCEECTTCEE
T ss_pred EeEeeccCCeEE
Confidence 333444444444
No 95
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=90.11 E-value=0.24 Score=48.60 Aligned_cols=16 Identities=13% Similarity=0.281 Sum_probs=7.7
Q ss_pred eEEECCCcEEeeeEEE
Q 012172 427 DVWFGANITLKGKVTI 442 (469)
Q Consensus 427 ~v~fg~~V~i~g~~~I 442 (469)
.+.+|+++.|..+++|
T Consensus 77 ~~~IG~~~~Ig~~a~I 92 (305)
T 3t57_A 77 YTFIGCNNIIGHHAVV 92 (305)
T ss_dssp EEEECSSCEECTTCEE
T ss_pred ceEECCceEECCccEe
Confidence 3444445555444444
No 96
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=90.02 E-value=0.28 Score=47.51 Aligned_cols=23 Identities=9% Similarity=0.186 Sum_probs=13.0
Q ss_pred CceEEEeeEEECCCcEEeeeEEE
Q 012172 420 DSLKVTGDVWFGANITLKGKVTI 442 (469)
Q Consensus 420 ~~l~v~G~v~fg~~V~i~g~~~I 442 (469)
.+++|.|++++|+++.|..+++|
T Consensus 63 ~~~~I~~~~~IG~~~~I~~~a~I 85 (283)
T 4eqy_A 63 SHSVIEGHTTIGEDNRIGHYASV 85 (283)
T ss_dssp TTCEECSEEEECSSCEECTTEEE
T ss_pred CCCEECCCcEECCCcEEcCCcEE
Confidence 34555555556666655555555
No 97
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=89.76 E-value=0.17 Score=53.27 Aligned_cols=40 Identities=13% Similarity=0.306 Sum_probs=18.8
Q ss_pred eeEEECCCcEEeeeEEEE-ecCCCceeeCCCCeeecceecC
Q 012172 426 GDVWFGANITLKGKVTIA-AKSGEKLEIPDGAVLENKEING 465 (469)
Q Consensus 426 G~v~fg~~V~i~g~~~I~-~~~~~~~~I~~~s~le~~~v~~ 465 (469)
+++++|++++|+.+|+|. +..|+.+.|.++++|.+++|+.
T Consensus 307 ~~v~IG~~~~I~~~~~I~~~vIG~~~~Ig~~a~I~gv~IGd 347 (496)
T 3c8v_A 307 DNAWMGKGSNAQENCYIINSRLERNCVTAHGGKIINAHLGD 347 (496)
T ss_dssp EEEEECTTCEECTTCEEEEEEEEESCEECTTCEEESEEEEE
T ss_pred eceEecCCCEECCCceEeceEeCCCCEECCCcEEcCceECC
Confidence 455555555555444444 2233444444444444444443
No 98
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=89.51 E-value=0.15 Score=46.01 Aligned_cols=18 Identities=22% Similarity=0.324 Sum_probs=6.8
Q ss_pred EeeEEECCCcEEeeeEEE
Q 012172 425 TGDVWFGANITLKGKVTI 442 (469)
Q Consensus 425 ~G~v~fg~~V~i~g~~~I 442 (469)
.+++.+|+++.|+.+++|
T Consensus 31 ~~~~~IG~~~~Ig~~~~I 48 (192)
T 3mqg_A 31 CGGAEIGEGCSLGQNVFV 48 (192)
T ss_dssp CTTCEECTTCEECTTCEE
T ss_pred CCCcEECCCCEECCCEEE
Confidence 333333333333333333
No 99
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=89.34 E-value=0.15 Score=48.09 Aligned_cols=41 Identities=17% Similarity=0.246 Sum_probs=28.8
Q ss_pred CceEEEeeEEECCCcEEeeeEEEE--ecCCCceeeCCCCeeec
Q 012172 420 DSLKVTGDVWFGANITLKGKVTIA--AKSGEKLEIPDGAVLEN 460 (469)
Q Consensus 420 ~~l~v~G~v~fg~~V~i~g~~~I~--~~~~~~~~I~~~s~le~ 460 (469)
.+.+|.+++++|+++.|+.+|+|. +..|+.+.|.+++++.+
T Consensus 114 ~~s~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~ 156 (240)
T 3r8y_A 114 MNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAG 156 (240)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECC
T ss_pred CCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECC
Confidence 456666777778888887777774 55667777777777744
No 100
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=89.29 E-value=0.29 Score=46.38 Aligned_cols=39 Identities=18% Similarity=0.307 Sum_probs=22.2
Q ss_pred EEECCCcEEeeeEEEEe--cCCCceeeCCCCeeecceecCC
Q 012172 428 VWFGANITLKGKVTIAA--KSGEKLEIPDGAVLENKEINGP 466 (469)
Q Consensus 428 v~fg~~V~i~g~~~I~~--~~~~~~~I~~~s~le~~~v~~~ 466 (469)
+++|++|.|+.+|+|.+ ..|+.+.|.++++|-+++|+.+
T Consensus 141 v~IG~~v~Ig~~~~I~~~~~Ig~~v~IG~~a~I~~v~Ig~~ 181 (247)
T 1qre_A 141 VYIGNNVSLAHQSQVHGPAAVGDDTFIGMQAFVFKSKVGNN 181 (247)
T ss_dssp EEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEECTT
T ss_pred eEECCCCEECCCCEEcCCcEECCCCEECCCCEEeceEECCC
Confidence 55555555555555552 2455666777776655555544
No 101
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=89.29 E-value=0.15 Score=49.43 Aligned_cols=39 Identities=26% Similarity=0.222 Sum_probs=26.9
Q ss_pred CceEEEeeEEECCCcEEeeeEEEE--ecCCCceeeCCCCee
Q 012172 420 DSLKVTGDVWFGANITLKGKVTIA--AKSGEKLEIPDGAVL 458 (469)
Q Consensus 420 ~~l~v~G~v~fg~~V~i~g~~~I~--~~~~~~~~I~~~s~l 458 (469)
..++|.++|++|+++.|..+|+|. ...|+.+.|.++++|
T Consensus 45 ~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~I 85 (283)
T 4eqy_A 45 PYAIVGSNVTIGARTTIGSHSVIEGHTTIGEDNRIGHYASV 85 (283)
T ss_dssp TTCEECTTEEECTTCEECTTCEECSEEEECSSCEECTTEEE
T ss_pred CCCEECCCCEECCCCEECCCCEECCCcEECCCcEEcCCcEE
Confidence 566677777777777777777765 445666667777766
No 102
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=89.26 E-value=0.19 Score=48.02 Aligned_cols=40 Identities=18% Similarity=0.142 Sum_probs=27.4
Q ss_pred CceEEEeeEEECCCcEEeeeEEE--------------EecCCCceeeCCCCeee
Q 012172 420 DSLKVTGDVWFGANITLKGKVTI--------------AAKSGEKLEIPDGAVLE 459 (469)
Q Consensus 420 ~~l~v~G~v~fg~~V~i~g~~~I--------------~~~~~~~~~I~~~s~le 459 (469)
.+++|.|++++|+++.|..+++| ....|+.+.|.++++|.
T Consensus 48 ~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~~IG~~~~Ig~~~~I~ 101 (265)
T 4e6u_A 48 SHVVVGGFTRIGQNNEIFQFASVGEVCQDLKYKGEETWLEIGNNNLIREHCSLH 101 (265)
T ss_dssp SSCEECSSEEECSSCEECTTCEEEECCCCTTCCSCCCEEEECSSCEECTTCEEE
T ss_pred CCcEEeCCcEECCCCEEcCCcEECCccccccccCCCCeEEECCCeEECCceEEC
Confidence 46677777888888888877777 33455556666666665
No 103
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=88.66 E-value=0.35 Score=46.17 Aligned_cols=17 Identities=12% Similarity=0.161 Sum_probs=10.7
Q ss_pred eEEECCCcEEeeeEEEE
Q 012172 427 DVWFGANITLKGKVTIA 443 (469)
Q Consensus 427 ~v~fg~~V~i~g~~~I~ 443 (469)
.+.+|+++.|+.+|.|.
T Consensus 85 ~~~IG~~~~Ig~~~~I~ 101 (265)
T 4e6u_A 85 WLEIGNNNLIREHCSLH 101 (265)
T ss_dssp EEEECSSCEECTTCEEE
T ss_pred eEEECCCeEECCceEEC
Confidence 56666666666666665
No 104
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=88.48 E-value=0.31 Score=48.72 Aligned_cols=50 Identities=12% Similarity=0.143 Sum_probs=28.1
Q ss_pred cCceEEEe-eEEECCCcEEeeeEEEE--ecCCCceeeCCCCeeecceecCCCC
Q 012172 419 LDSLKVTG-DVWFGANITLKGKVTIA--AKSGEKLEIPDGAVLENKEINGPGD 468 (469)
Q Consensus 419 ~~~l~v~G-~v~fg~~V~i~g~~~I~--~~~~~~~~I~~~s~le~~~v~~~~~ 468 (469)
..++.|++ ++.+++++.|.++|.|. +..++.+.|.++++|++++|+.|.+
T Consensus 56 ~~~~~I~~~~a~I~~~a~I~~~~~I~g~~~Ig~~~~Ig~~~~I~~~~Ig~~~~ 108 (334)
T 2pig_A 56 QGDCWIYDENAMAFAGTEITGNARITQPCTLYNNVRIGDNVWIDRADISDGAR 108 (334)
T ss_dssp SSSCEECCTTCEEETTCEECTTCEEESSCEEESSCEECTTCEEESCEEESSCE
T ss_pred CCceEEcCCCeEEcCCcEECCCcEEeeeeeECCCcEECCCCEEEeEEEcCCCE
Confidence 34444444 34444444444444443 2334556788888888888877654
No 105
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=88.38 E-value=0.18 Score=48.56 Aligned_cols=23 Identities=13% Similarity=0.353 Sum_probs=18.2
Q ss_pred CceEEEeeEEECCCcEEeeeEEE
Q 012172 420 DSLKVTGDVWFGANITLKGKVTI 442 (469)
Q Consensus 420 ~~l~v~G~v~fg~~V~i~g~~~I 442 (469)
.+++|.|++++|+++.|..+|+|
T Consensus 42 ~~~~I~g~~~IG~~~~I~~~~~I 64 (270)
T 1j2z_A 42 NNVTLQGHTFVGKNTEIFPFAVL 64 (270)
T ss_dssp TTCEECSEEEECTTCEECTTCEE
T ss_pred CCcEEeCCeEEcCCCEEEeeeEE
Confidence 56777788888888888877777
No 106
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=88.34 E-value=0.31 Score=44.55 Aligned_cols=42 Identities=14% Similarity=0.158 Sum_probs=25.1
Q ss_pred eEEECCCcEEeeeEEEE--ecCCCceeeCCCCeee----cceecCCCC
Q 012172 427 DVWFGANITLKGKVTIA--AKSGEKLEIPDGAVLE----NKEINGPGD 468 (469)
Q Consensus 427 ~v~fg~~V~i~g~~~I~--~~~~~~~~I~~~s~le----~~~v~~~~~ 468 (469)
++.+|++|.|..+|+|. ...|+.+.|.++++|. +.+|+.++.
T Consensus 52 ~v~IG~~~~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~~~~IG~~~~ 99 (205)
T 3vbi_A 52 VISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALYGGEVGIEMYDFAN 99 (205)
T ss_dssp GEEECSSEEECTTCEEEEEEEECSSEEECTTCEEEEEEEEEEECTTCE
T ss_pred eeEECCCCEECCCCEEccceEECCCCEECCCeEEEcCCccEEECCCCE
Confidence 45555555555555554 3457778888888883 356665543
No 107
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=88.23 E-value=0.23 Score=49.20 Aligned_cols=30 Identities=13% Similarity=0.198 Sum_probs=14.0
Q ss_pred EECCCcEEeeeEEEE--ecCCCceeeCCCCee
Q 012172 429 WFGANITLKGKVTIA--AKSGEKLEIPDGAVL 458 (469)
Q Consensus 429 ~fg~~V~i~g~~~I~--~~~~~~~~I~~~s~l 458 (469)
++|++|.|+.+|+|. ...|+.+.|.++|++
T Consensus 225 ~IGd~v~IGaga~Ilggv~IG~~a~IGagsvV 256 (313)
T 3q1x_A 225 TVGDYVTIGTGAKVLGNIIVGSHVRIGANCWI 256 (313)
T ss_dssp EECSSCEECTTCEEESSCEECSSEEECTTCEE
T ss_pred EECCCCEECCCCEECCCcEECCCCEECCCCEE
Confidence 344444444444443 233455556666555
No 108
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=88.22 E-value=0.21 Score=50.65 Aligned_cols=12 Identities=17% Similarity=0.038 Sum_probs=7.0
Q ss_pred EEeHHHHHHHHH
Q 012172 298 WVNLKAIKRLVE 309 (469)
Q Consensus 298 ~~~l~~L~~~l~ 309 (469)
-+++..|.+++.
T Consensus 25 ~~~~~~ia~~~~ 36 (372)
T 3pmo_A 25 SYTLGQLAAHVG 36 (372)
T ss_dssp EEEHHHHHHHHT
T ss_pred cccHHHHHHHhC
Confidence 355666666654
No 109
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=88.03 E-value=0.45 Score=48.65 Aligned_cols=52 Identities=25% Similarity=0.474 Sum_probs=43.7
Q ss_pred ccCceEEEeeEEECCCcEEeeeEEEE--ecCCCceeeCCCCeeecceecCCCCC
Q 012172 418 ELDSLKVTGDVWFGANITLKGKVTIA--AKSGEKLEIPDGAVLENKEINGPGDL 469 (469)
Q Consensus 418 ~~~~l~v~G~v~fg~~V~i~g~~~I~--~~~~~~~~I~~~s~le~~~v~~~~~~ 469 (469)
......+++++.+|+++.|..+|+|. +..|+.+.|.++++|++++|+.+..|
T Consensus 259 ~p~~~~~~~~~~ig~~~~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~Ig~~~~I 312 (459)
T 4fce_A 259 DPSRFDLRGELTHGRDITIDTNVIIEGHVILGDRVRIGTGCVLKNCVIGDDSEI 312 (459)
T ss_dssp CGGGEEEEEEEEECSSCEECTTEEEEEEEEECTTCEECTTCEEESCEECTTCEE
T ss_pred CCCeEEEeCcEEECCCcEECCCeeeccceEECCCCEECCCCEEeccEECCCCEE
Confidence 34567788999999999999999886 56788899999999999999887653
No 110
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=87.97 E-value=0.31 Score=46.69 Aligned_cols=18 Identities=33% Similarity=0.403 Sum_probs=12.3
Q ss_pred eeEEECCCcEEeeeEEEE
Q 012172 426 GDVWFGANITLKGKVTIA 443 (469)
Q Consensus 426 G~v~fg~~V~i~g~~~I~ 443 (469)
+.+.+|+++.|+.+|+|.
T Consensus 82 ~~v~IG~~~~Ig~~~~I~ 99 (266)
T 3r0s_A 82 SGVVIGKNATIREFATIN 99 (266)
T ss_dssp CEEEECTTCEECTTCEEE
T ss_pred ceEEECCCCEECCceEec
Confidence 466677777777777666
No 111
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=87.85 E-value=0.49 Score=42.91 Aligned_cols=15 Identities=13% Similarity=0.516 Sum_probs=6.3
Q ss_pred eEEEeeEEECCCcEE
Q 012172 422 LKVTGDVWFGANITL 436 (469)
Q Consensus 422 l~v~G~v~fg~~V~i 436 (469)
++|..+|.||++|+|
T Consensus 97 i~IG~~~~Ig~~v~I 111 (188)
T 3srt_A 97 IEIGDNVMLAPNVQI 111 (188)
T ss_dssp EEECSSCEECTTCEE
T ss_pred eEECCeeEECCCcEE
Confidence 333334444444444
No 112
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=87.84 E-value=0.47 Score=45.08 Aligned_cols=23 Identities=17% Similarity=0.235 Sum_probs=14.4
Q ss_pred CceEEEeeEEECCCcEEeeeEEE
Q 012172 420 DSLKVTGDVWFGANITLKGKVTI 442 (469)
Q Consensus 420 ~~l~v~G~v~fg~~V~i~g~~~I 442 (469)
.+++|.|++++|+++.|..+|+|
T Consensus 46 ~~~~I~~~~~IG~~~~I~~~~~I 68 (262)
T 2qia_A 46 SHVVVNGHTKIGRDNEIYQFASI 68 (262)
T ss_dssp SSCEECSEEEECSSCEECTTCEE
T ss_pred CCCEECCCcEECCCCEEecceEE
Confidence 45556666666666666666666
No 113
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=87.65 E-value=0.45 Score=43.53 Aligned_cols=15 Identities=13% Similarity=0.277 Sum_probs=7.0
Q ss_pred EEECCCcEEeeeEEE
Q 012172 428 VWFGANITLKGKVTI 442 (469)
Q Consensus 428 v~fg~~V~i~g~~~I 442 (469)
+++|++|.|+.+|.|
T Consensus 95 v~IG~~v~Ig~~~~I 109 (199)
T 3ftt_A 95 ITIGDNVFIGPNCGF 109 (199)
T ss_dssp EEECSSEEECTTCEE
T ss_pred EEECCCCEECCCCEE
Confidence 444444444444444
No 114
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=87.50 E-value=0.28 Score=46.82 Aligned_cols=6 Identities=17% Similarity=0.230 Sum_probs=2.4
Q ss_pred cceecC
Q 012172 460 NKEING 465 (469)
Q Consensus 460 ~~~v~~ 465 (469)
+++|+.
T Consensus 88 ~~~Ig~ 93 (273)
T 3fs8_A 88 DTIIGD 93 (273)
T ss_dssp SCEECT
T ss_pred CCEECC
Confidence 344433
No 115
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=87.43 E-value=0.31 Score=46.39 Aligned_cols=40 Identities=28% Similarity=0.210 Sum_probs=25.9
Q ss_pred CceEEEeeEEECCCcEEeeeEEEE--ecCCCceeeCCCCeee
Q 012172 420 DSLKVTGDVWFGANITLKGKVTIA--AKSGEKLEIPDGAVLE 459 (469)
Q Consensus 420 ~~l~v~G~v~fg~~V~i~g~~~I~--~~~~~~~~I~~~s~le 459 (469)
..+.|.+++++|+++.|..+|+|. ...|+.+.|.++++|.
T Consensus 28 ~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~ 69 (262)
T 2qia_A 28 PFCIVGPHVEIGEGTVLKSHVVVNGHTKIGRDNEIYQFASIG 69 (262)
T ss_dssp TTCEECTTEEECTTCEECSSCEECSEEEECSSCEECTTCEEE
T ss_pred CCCEECCCCEECCCcEECCCCEECCCcEECCCCEEecceEEC
Confidence 455566666666666666666665 4456667777777774
No 116
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=87.25 E-value=0.52 Score=42.75 Aligned_cols=23 Identities=17% Similarity=0.115 Sum_probs=13.1
Q ss_pred ceEEE--eeEEECCCcEEeeeEEEE
Q 012172 421 SLKVT--GDVWFGANITLKGKVTIA 443 (469)
Q Consensus 421 ~l~v~--G~v~fg~~V~i~g~~~I~ 443 (469)
.++|. +.+++|++|.|+.+|.|.
T Consensus 86 ~~~i~~~~~i~IG~~v~Ig~~v~I~ 110 (185)
T 2p2o_A 86 DGVILDVCEVRIGDHCFIGPGVHIY 110 (185)
T ss_dssp SEEEECSSCEEECTTCEECTTCEEE
T ss_pred CeEEEeccceEECCCcEEeCCCEEE
Confidence 44443 456666666666666663
No 117
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=87.18 E-value=0.62 Score=42.14 Aligned_cols=35 Identities=26% Similarity=0.467 Sum_probs=21.0
Q ss_pred EeeEEECCCcEEeeeEEEE--ecCCCceeeCCCCeee
Q 012172 425 TGDVWFGANITLKGKVTIA--AKSGEKLEIPDGAVLE 459 (469)
Q Consensus 425 ~G~v~fg~~V~i~g~~~I~--~~~~~~~~I~~~s~le 459 (469)
.+++++|++|.|+++|+|. ...|+.++|.++|++.
T Consensus 126 ~~~v~IG~~v~Ig~~a~I~~gv~IG~~~vIgagsvV~ 162 (182)
T 1ocx_A 126 GKPVTIGNNVWIGGRAVINPGVTIGDNVVVASGAVVT 162 (182)
T ss_dssp ECCEEECTTCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred cCCeEEeCCeEECCCCEECCCcEECCCCEECCCCEEC
Confidence 4466666666666666665 3355556666666554
No 118
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=86.90 E-value=0.4 Score=46.94 Aligned_cols=31 Identities=16% Similarity=0.238 Sum_probs=14.9
Q ss_pred EEECCCcEEeeeEEEE--ecCCCceeeCCCCee
Q 012172 428 VWFGANITLKGKVTIA--AKSGEKLEIPDGAVL 458 (469)
Q Consensus 428 v~fg~~V~i~g~~~I~--~~~~~~~~I~~~s~l 458 (469)
+++|++|.|+.+++|. ...|+.+.|.++|++
T Consensus 210 ~~IGd~v~IGaga~Ilggv~IG~~a~IGagsvV 242 (289)
T 1t3d_A 210 PKIREGVMIGAGAKILGNIEVGRGAKIGAGSVV 242 (289)
T ss_dssp CEECTTCEECTTCEEESSCEECTTCEECTTCEE
T ss_pred eEECCCeEECCCCEEecCcEECCCCEECCCCEE
Confidence 4455555555444444 224444555555544
No 119
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=86.85 E-value=0.78 Score=42.25 Aligned_cols=34 Identities=15% Similarity=0.170 Sum_probs=18.1
Q ss_pred eEEECCCcEEeeeEEEE-----ecCCCceeeCCCCeeec
Q 012172 427 DVWFGANITLKGKVTIA-----AKSGEKLEIPDGAVLEN 460 (469)
Q Consensus 427 ~v~fg~~V~i~g~~~I~-----~~~~~~~~I~~~s~le~ 460 (469)
.+.+|+++.|+..+++. ...|+.+.|.++++|.+
T Consensus 79 ~~~IG~~~~Ig~~~ii~~~~~~i~IG~~~~Ig~~~~I~~ 117 (215)
T 2wlg_A 79 SLQIQAKTTMGNGEITIAEKGKISIGKDCMLAHGYEIRN 117 (215)
T ss_dssp EEEECTTCEECSEEEEECTTCEEEECTTCEECTTEEEES
T ss_pred eEEEcCCCEECCEEEEEeCCCCEEECCCCEEcCCEEEEC
Confidence 47777777777655442 22344444444444443
No 120
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=86.72 E-value=0.27 Score=49.78 Aligned_cols=32 Identities=28% Similarity=0.382 Sum_probs=13.6
Q ss_pred eEEECCCcEEeeeEEEE--ecCCCceeeCCCCee
Q 012172 427 DVWFGANITLKGKVTIA--AKSGEKLEIPDGAVL 458 (469)
Q Consensus 427 ~v~fg~~V~i~g~~~I~--~~~~~~~~I~~~s~l 458 (469)
+|.+|+++.|..+|+|. +..|+.+.|.++++|
T Consensus 167 ~v~IG~~~~I~~~~~I~~~~~IG~~v~I~~g~~I 200 (372)
T 3pmo_A 167 RSVIGEGGWLAPRVTLYHDVTIGARVSIQSGAVI 200 (372)
T ss_dssp TCEECTTCEECTTCEECTTEEECTTCEECTTCEE
T ss_pred CCEECCCcccCCCcEEEeeeEECceeeccCCcEE
Confidence 33333444444333333 224444555555554
No 121
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=86.60 E-value=0.28 Score=49.46 Aligned_cols=16 Identities=6% Similarity=0.115 Sum_probs=12.5
Q ss_pred cEEEEEeEEEeHHHHH
Q 012172 290 KIFNTNNLWVNLKAIK 305 (469)
Q Consensus 290 ~~~Nt~~~~~~l~~L~ 305 (469)
...|+++|.|+.+.+.
T Consensus 74 ~~~~aGiyI~~~~~l~ 89 (374)
T 2iu8_A 74 KSSEAGAIIISRTQFQ 89 (374)
T ss_dssp HTCCCSEEEEEHHHHH
T ss_pred hcCCcEEEEeChhHhh
Confidence 3468899999988764
No 122
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=86.20 E-value=0.4 Score=45.65 Aligned_cols=19 Identities=11% Similarity=0.092 Sum_probs=11.0
Q ss_pred EeeEEECCCcEEeeeEEEE
Q 012172 425 TGDVWFGANITLKGKVTIA 443 (469)
Q Consensus 425 ~G~v~fg~~V~i~g~~~I~ 443 (469)
.+.+.+|+++.|+.+|.|.
T Consensus 77 ~~~v~IG~~~~Ig~~~~I~ 95 (259)
T 3hsq_A 77 LTKTVIGDHNIFREYSNIH 95 (259)
T ss_dssp CCCEEECSSCEECTTCEEE
T ss_pred CCcEEECCCcEECCCCEEC
Confidence 3455566666666666555
No 123
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=86.10 E-value=0.46 Score=48.33 Aligned_cols=41 Identities=7% Similarity=0.222 Sum_probs=26.8
Q ss_pred CceEEEeeEEECCCcEEeeeEEEE-ecCCCceeeCCCCeeecc
Q 012172 420 DSLKVTGDVWFGANITLKGKVTIA-AKSGEKLEIPDGAVLENK 461 (469)
Q Consensus 420 ~~l~v~G~v~fg~~V~i~g~~~I~-~~~~~~~~I~~~s~le~~ 461 (469)
.+++|+ ++++|+++.|+.+|+|. +..|+.+.|++++++.+.
T Consensus 351 ~~~~i~-~~~i~~~~~i~~~~~i~~~~ig~~~~i~~~~~i~~~ 392 (420)
T 3brk_X 351 SYSRLE-NAVVLPSVKIGRHAQLSNVVIDHGVVIPEGLIVGED 392 (420)
T ss_dssp TTCEEE-EEEECTTCEECTTCEEEEEEECTTCEECTTCEESSC
T ss_pred CCCEEc-ceEEcCCCEECCCCEEeceEECCCCEECCCCEEeCC
Confidence 344443 56777888887777776 335666777777777643
No 124
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=86.02 E-value=1 Score=41.49 Aligned_cols=36 Identities=19% Similarity=0.314 Sum_probs=22.5
Q ss_pred EEeeEEECCCcEEeeeEEEE--ecCCCceeeCCCCeee
Q 012172 424 VTGDVWFGANITLKGKVTIA--AKSGEKLEIPDGAVLE 459 (469)
Q Consensus 424 v~G~v~fg~~V~i~g~~~I~--~~~~~~~~I~~~s~le 459 (469)
+.+++++|++|.|+++|+|. ...|+.++|.++|++-
T Consensus 128 ~~~~v~IGd~v~IG~~a~I~~gv~IG~~~vIgagsvV~ 165 (203)
T 1krr_A 128 YSFPITIGNNVWIGSHVVINPGVTIGDNSVIGAGSIVT 165 (203)
T ss_dssp EECCEEECTTCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred eCCCcEECCCeEECCCCEEeCCeEECCCCEECCCCEEC
Confidence 44566777777777766665 3455566666666653
No 125
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=85.66 E-value=0.56 Score=45.10 Aligned_cols=16 Identities=13% Similarity=0.214 Sum_probs=6.8
Q ss_pred EEECCCcEEeeeEEEE
Q 012172 428 VWFGANITLKGKVTIA 443 (469)
Q Consensus 428 v~fg~~V~i~g~~~I~ 443 (469)
+.+|+++.|+.+|+|.
T Consensus 80 ~~IG~~~~I~~~~~I~ 95 (270)
T 1j2z_A 80 LIIGEDNLIREFCMIN 95 (270)
T ss_dssp EEECSSCEECTTCEEC
T ss_pred eEECCCCEECCCeEEc
Confidence 3344444444444443
No 126
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=85.53 E-value=0.36 Score=50.88 Aligned_cols=42 Identities=14% Similarity=0.056 Sum_probs=29.3
Q ss_pred eEEECCCcEEeeeEEEE-ecCCCceeeCCCCeeecc-----eecCCCC
Q 012172 427 DVWFGANITLKGKVTIA-AKSGEKLEIPDGAVLENK-----EINGPGD 468 (469)
Q Consensus 427 ~v~fg~~V~i~g~~~I~-~~~~~~~~I~~~s~le~~-----~v~~~~~ 468 (469)
++++|++|.|+.+++|. +..|+.+.|.++|+|.+. +|+.+..
T Consensus 325 ~~vIG~~~~Ig~~a~I~gv~IGd~v~IG~~a~I~~~~~~~v~IG~~a~ 372 (496)
T 3c8v_A 325 NSRLERNCVTAHGGKIINAHLGDMIFTGFNSFLQGSESSPLKIGDGCV 372 (496)
T ss_dssp EEEEEESCEECTTCEEESEEEEETCEECTTCEEECCSSSCEEECTTCE
T ss_pred ceEeCCCCEECCCcEEcCceECCCcEECCCCEEeCCCCcceEECCCCE
Confidence 55666667776666666 445667888888888776 7777654
No 127
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=85.40 E-value=0.38 Score=49.48 Aligned_cols=24 Identities=17% Similarity=0.296 Sum_probs=13.5
Q ss_pred CceEEEeeEEECCCcEEeeeEEEE
Q 012172 420 DSLKVTGDVWFGANITLKGKVTIA 443 (469)
Q Consensus 420 ~~l~v~G~v~fg~~V~i~g~~~I~ 443 (469)
.+..|.+++.+|+++.|+.+|+|.
T Consensus 285 ~~~~i~~~~~ig~~~~I~~~~~i~ 308 (468)
T 1hm9_A 285 ANVILKGQTKIGAETVLTNGTYVV 308 (468)
T ss_dssp SSCEEESSCEECTTCEECTTCEEE
T ss_pred CCcEECCCCEECCCCEECCCCEEe
Confidence 345555556666666555555554
No 128
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=85.34 E-value=1.1 Score=40.59 Aligned_cols=15 Identities=13% Similarity=0.266 Sum_probs=8.1
Q ss_pred EEECCCcEEeeeEEE
Q 012172 428 VWFGANITLKGKVTI 442 (469)
Q Consensus 428 v~fg~~V~i~g~~~I 442 (469)
+++|+++.|..+|+|
T Consensus 52 i~IG~~~~I~~~~~I 66 (194)
T 3tv0_A 52 IVIGEGNLIEEQALI 66 (194)
T ss_dssp EEECTTCEECTTCEE
T ss_pred eEECCCccccCCccc
Confidence 455555555555555
No 129
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=85.14 E-value=0.79 Score=41.42 Aligned_cols=18 Identities=28% Similarity=0.261 Sum_probs=11.0
Q ss_pred eeEEECCCcEEeeeEEEE
Q 012172 426 GDVWFGANITLKGKVTIA 443 (469)
Q Consensus 426 G~v~fg~~V~i~g~~~I~ 443 (469)
+.++||++|.|+.+|.|.
T Consensus 91 ~~i~IG~~v~Ig~~v~I~ 108 (182)
T 1ocx_A 91 CPIRIGDNCMLAPGVHIY 108 (182)
T ss_dssp SCEEECTTCEECTTCEEE
T ss_pred cceEEcCCcEEeCCcEEE
Confidence 456666666666666663
No 130
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=84.83 E-value=0.59 Score=42.31 Aligned_cols=61 Identities=20% Similarity=0.155 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhhc-CceeecCCccCCCCCeEEECCCcccccccccccccCCcccccCceEEEe--eEEECCCcEEeeeEE
Q 012172 365 LLLVQSDLYTLAD-GFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTG--DVWFGANITLKGKVT 441 (469)
Q Consensus 365 L~~~~~~~~~l~~-g~l~~~~~r~~~~~p~V~l~~~~~~~~~~~~~i~~~p~~~~~~~l~v~G--~v~fg~~V~i~g~~~ 441 (469)
+..+++.+..+.. +.....|... +..+.+.+++++. |. .+++|.. .+++|++|.|+.+|.
T Consensus 50 ~~~~~~~~~~~~~~~~~I~~~~~~-~~g~~v~IG~~~~--------I~--------~~~~i~~~~~v~IG~~~~Ig~~~~ 112 (190)
T 3hjj_A 50 FTLLNQLLGSSADGKAQINPDFRC-DYGYNIHVGKSFF--------AN--------FNCVILDVCEVRIGDHCMFAPGVH 112 (190)
T ss_dssp HHHHHHHSSEESSSCCEECSSCEE-SSSTTEEECTTCE--------EC--------TTCEEECSSCEEECTTCEECTTCE
T ss_pred HHHHHHHhhhcCCCCcEECCCEEE-EeCCceEECCcee--------eC--------CCeEEEeCCCeEECCceEEcCCcE
Confidence 3444433333444 4555555443 2334567766644 32 3444442 556666666666666
Q ss_pred E
Q 012172 442 I 442 (469)
Q Consensus 442 I 442 (469)
|
T Consensus 113 I 113 (190)
T 3hjj_A 113 I 113 (190)
T ss_dssp E
T ss_pred E
Confidence 6
No 131
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=84.81 E-value=0.69 Score=45.21 Aligned_cols=47 Identities=21% Similarity=0.212 Sum_probs=27.0
Q ss_pred ceEEEeeEEECCCcEEeeeEEEEe----------cCCCceeeCCCCeee-cceecCCC
Q 012172 421 SLKVTGDVWFGANITLKGKVTIAA----------KSGEKLEIPDGAVLE-NKEINGPG 467 (469)
Q Consensus 421 ~l~v~G~v~fg~~V~i~g~~~I~~----------~~~~~~~I~~~s~le-~~~v~~~~ 467 (469)
.++|..++++|++|+|..+|+|.+ ..|+.+.|.++++|- +++|+.|.
T Consensus 184 gvvIG~~~~IGd~v~I~~gvtIg~~~~~~~~r~~~IGd~v~IGaga~Il~gv~IG~~a 241 (287)
T 3mc4_A 184 GLVVGETAVVEDNVSILHGVTLGGTGKSSGDRHPKIRQGVLIGAGAKILGNIQVGQCS 241 (287)
T ss_dssp TCEECTTCEECSSCEEETTCEEEC-----CCCSCEECTTCEECTTCEEESSCEECTTC
T ss_pred CeEECCCeEECCCCEEcCCCEEcCCcccCCCcCCEECCCCEECCCCEECCCcEECCCC
Confidence 455555566666666666666553 345556666666654 35555544
No 132
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=84.38 E-value=0.51 Score=47.42 Aligned_cols=48 Identities=8% Similarity=0.163 Sum_probs=24.5
Q ss_pred CceEEEeeEEECCCcEEeeeEEEE--ecCCCceeeCCCCee-ecceecCCC
Q 012172 420 DSLKVTGDVWFGANITLKGKVTIA--AKSGEKLEIPDGAVL-ENKEINGPG 467 (469)
Q Consensus 420 ~~l~v~G~v~fg~~V~i~g~~~I~--~~~~~~~~I~~~s~l-e~~~v~~~~ 467 (469)
..++|.+++++|++|.|.++|+|. +..|+.+.|.++++| ++++|+.++
T Consensus 125 ~~~~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~ 175 (357)
T 4e79_A 125 HYVVIGENCVVGDNTVIQSHTKLDDNVEVGKDCFIDSYVTITGSSKLRDRV 175 (357)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSC
T ss_pred CCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEEecccEEEeEe
Confidence 445555555555555555555554 334444555555555 344444443
No 133
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=84.35 E-value=0.63 Score=45.98 Aligned_cols=22 Identities=9% Similarity=0.054 Sum_probs=12.1
Q ss_pred CCCceeeCCCCeee-cceecCCC
Q 012172 446 SGEKLEIPDGAVLE-NKEINGPG 467 (469)
Q Consensus 446 ~~~~~~I~~~s~le-~~~v~~~~ 467 (469)
.|+.+.|.++++|- +++|+.|.
T Consensus 254 IGd~V~IGaga~Il~gv~IGd~a 276 (310)
T 3f1x_A 254 LEDDVIVYSNATILGRVTIGKGA 276 (310)
T ss_dssp ECTTCEECTTCEEESSCEECTTC
T ss_pred ECCCcEEcCCCEECCCcEECCCC
Confidence 45556666666654 45555443
No 134
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=84.26 E-value=0.49 Score=43.14 Aligned_cols=17 Identities=6% Similarity=0.163 Sum_probs=9.7
Q ss_pred eEEECCCcEEeeeEEEE
Q 012172 427 DVWFGANITLKGKVTIA 443 (469)
Q Consensus 427 ~v~fg~~V~i~g~~~I~ 443 (469)
.+++|++|.|+.+|.|.
T Consensus 96 ~i~IG~~~~Ig~~~~I~ 112 (195)
T 3nz2_A 96 PITIGDHVLIGPSTQFY 112 (195)
T ss_dssp CEEECTTCEECTTCEEE
T ss_pred eEEECCCCEECCCCEEe
Confidence 45566666666555554
No 135
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=84.13 E-value=0.61 Score=47.80 Aligned_cols=19 Identities=11% Similarity=0.167 Sum_probs=12.9
Q ss_pred eeeCCCCeeecceecCCCC
Q 012172 450 LEIPDGAVLENKEINGPGD 468 (469)
Q Consensus 450 ~~I~~~s~le~~~v~~~~~ 468 (469)
+.|.+++.|++++|+.+..
T Consensus 389 ~~Ig~~~~i~~~~Ig~~~~ 407 (451)
T 1yp2_A 389 IGIGKNCHIKRAIIDKNAR 407 (451)
T ss_dssp SEECTTCEEESEEECTTCE
T ss_pred EEECCCCEEeccEeCCCcE
Confidence 5677777777777766543
No 136
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=83.84 E-value=0.41 Score=48.28 Aligned_cols=21 Identities=14% Similarity=0.142 Sum_probs=9.1
Q ss_pred eEEEeeEEECCCcEEeeeEEE
Q 012172 422 LKVTGDVWFGANITLKGKVTI 442 (469)
Q Consensus 422 l~v~G~v~fg~~V~i~g~~~I 442 (469)
++|.+++.+|+++.|.++|+|
T Consensus 149 ~~I~~~~~IG~~~~I~~~~~I 169 (374)
T 2iu8_A 149 AVVCQHAHVGSACHIGSGSVI 169 (374)
T ss_dssp CEECTTCEECTTCEECTTCEE
T ss_pred CEECCCCEECCCCEECCCcEE
Confidence 334444444444444444444
No 137
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=83.45 E-value=1 Score=42.58 Aligned_cols=35 Identities=17% Similarity=0.283 Sum_probs=26.2
Q ss_pred eEEECCCcEEeeeEEEE-----ecCCCceeeCCCCeeecc
Q 012172 427 DVWFGANITLKGKVTIA-----AKSGEKLEIPDGAVLENK 461 (469)
Q Consensus 427 ~v~fg~~V~i~g~~~I~-----~~~~~~~~I~~~s~le~~ 461 (469)
++++|+++.|+.+|+|. ...|+.+.|.++++|.++
T Consensus 105 ~v~IG~~~~Ig~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~ 144 (252)
T 3jqy_B 105 KVIIGRRTTIGAGFEVVTDKCNVTIGHDCMIARDVILRAS 144 (252)
T ss_dssp EEEECTTCEECTTCEEECSSSEEEECTTCEECSSEEEECS
T ss_pred EEEECCCCEECCCcEEEeCCCCeEECCCCEEcCCcEEecC
Confidence 77778888888777775 456677778888888775
No 138
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=83.00 E-value=0.42 Score=47.62 Aligned_cols=49 Identities=12% Similarity=0.151 Sum_probs=32.0
Q ss_pred CceEEEeeEEECCCcEEeeeEEEE--ecCCCceeeCCCCee-ecceecCCCC
Q 012172 420 DSLKVTGDVWFGANITLKGKVTIA--AKSGEKLEIPDGAVL-ENKEINGPGD 468 (469)
Q Consensus 420 ~~l~v~G~v~fg~~V~i~g~~~I~--~~~~~~~~I~~~s~l-e~~~v~~~~~ 468 (469)
..++|.+++++|+++.|.++|+|. +..|+.+.|.++++| ++++|+.++.
T Consensus 120 ~~~~I~~~v~IG~~~~I~~~~~Ig~~~~IG~~~~I~~~~~I~~~~~IG~~~~ 171 (341)
T 3eh0_A 120 ANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHEIQIGQNCL 171 (341)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECSSCE
T ss_pred CCcEECCCcEECCCcEECCCcEECCCCEECCCcEECCCcEECCCCEECCccE
Confidence 566677777777777777777774 445555666666666 5666666543
No 139
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=82.71 E-value=0.47 Score=43.85 Aligned_cols=22 Identities=14% Similarity=0.475 Sum_probs=9.6
Q ss_pred ceEEEeeEEECCCcEEeeeEEE
Q 012172 421 SLKVTGDVWFGANITLKGKVTI 442 (469)
Q Consensus 421 ~l~v~G~v~fg~~V~i~g~~~I 442 (469)
.++|.+++++|+++.|..+++|
T Consensus 123 ~~~i~~~~~IG~~~~I~~~~~I 144 (220)
T 4ea9_A 123 GVAINADSWIGDLAIINTGAVV 144 (220)
T ss_dssp TCEECTTCEECTTCEECTTCEE
T ss_pred CCEECCCCEECCCCEECCCCEE
Confidence 3334444444444444444444
No 140
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=82.62 E-value=0.65 Score=44.94 Aligned_cols=15 Identities=7% Similarity=0.102 Sum_probs=5.8
Q ss_pred EEECCCcEEeeeEEE
Q 012172 428 VWFGANITLKGKVTI 442 (469)
Q Consensus 428 v~fg~~V~i~g~~~I 442 (469)
+++|++|.|+.+|+|
T Consensus 178 v~IGd~v~IG~~a~I 192 (276)
T 3gos_A 178 TIIEDNCFVGARSEV 192 (276)
T ss_dssp CEECTTCEECTTCEE
T ss_pred eEECCCCEECCCCEE
Confidence 333444444333333
No 141
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=80.86 E-value=0.73 Score=45.34 Aligned_cols=13 Identities=8% Similarity=0.067 Sum_probs=5.2
Q ss_pred EEECCCcEEeeeE
Q 012172 428 VWFGANITLKGKV 440 (469)
Q Consensus 428 v~fg~~V~i~g~~ 440 (469)
+++|++|.|+.+|
T Consensus 203 v~IGd~v~IG~~a 215 (304)
T 3eg4_A 203 TIIEDNCFIGARS 215 (304)
T ss_dssp CEECTTCEECTTC
T ss_pred eEEcCCCEECCCC
Confidence 3334444443333
No 142
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=80.83 E-value=0.62 Score=42.31 Aligned_cols=48 Identities=15% Similarity=0.121 Sum_probs=27.5
Q ss_pred CceEEEeeEEECCCcEEeeeEEEE--ecCCCceeeCCCCeeec-ceecCCC
Q 012172 420 DSLKVTGDVWFGANITLKGKVTIA--AKSGEKLEIPDGAVLEN-KEINGPG 467 (469)
Q Consensus 420 ~~l~v~G~v~fg~~V~i~g~~~I~--~~~~~~~~I~~~s~le~-~~v~~~~ 467 (469)
.+++|.+++++|+++.|..+++|. +..|+.+.|.++++|.+ ++|+.+.
T Consensus 100 ~~~~I~~~~~IG~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~ 150 (194)
T 3bfp_A 100 PYVVINAKAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNC 150 (194)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred CCCEECCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEECCCcEECCCC
Confidence 345666667777777776666664 23444455555555554 5555443
No 143
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=80.41 E-value=0.53 Score=43.76 Aligned_cols=38 Identities=32% Similarity=0.452 Sum_probs=26.2
Q ss_pred eEEEeeEEECCCcEEeeeEEEE--ecCCCceeeCCCCeee
Q 012172 422 LKVTGDVWFGANITLKGKVTIA--AKSGEKLEIPDGAVLE 459 (469)
Q Consensus 422 l~v~G~v~fg~~V~i~g~~~I~--~~~~~~~~I~~~s~le 459 (469)
+.+.|+|++|++|.|+.+|+|. ...|+.+.|.++|++-
T Consensus 114 ~~~~g~v~IG~~v~IG~~a~I~~gv~IG~gavIgagsvV~ 153 (220)
T 4hur_A 114 LPLKGDIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVT 153 (220)
T ss_dssp SCCCCCEEECSSCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred ccccCCeEECCCcEECCCCEEeCCCEECCCCEEcCCCEEc
Confidence 4456777777777777777776 4456667777777774
No 144
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=79.58 E-value=0.95 Score=41.77 Aligned_cols=15 Identities=33% Similarity=0.514 Sum_probs=6.9
Q ss_pred EEECCCcEEeeeEEE
Q 012172 428 VWFGANITLKGKVTI 442 (469)
Q Consensus 428 v~fg~~V~i~g~~~I 442 (469)
++||++|.|+.+|.|
T Consensus 96 i~IG~~v~Ig~~v~I 110 (203)
T 1krr_A 96 VTIGDNVLIAPNVTL 110 (203)
T ss_dssp EEECSSCEECSSCEE
T ss_pred eEECCCCEECCCCEE
Confidence 444444444444444
No 145
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=79.30 E-value=1.5 Score=42.30 Aligned_cols=47 Identities=21% Similarity=0.232 Sum_probs=25.1
Q ss_pred ceEEEeeEEECCCcEEeeeEEEEe----------cCCCceeeCCCCeee-cceecCCC
Q 012172 421 SLKVTGDVWFGANITLKGKVTIAA----------KSGEKLEIPDGAVLE-NKEINGPG 467 (469)
Q Consensus 421 ~l~v~G~v~fg~~V~i~g~~~I~~----------~~~~~~~I~~~s~le-~~~v~~~~ 467 (469)
.++|..++++|++|+|..+|+|.+ ..|+.+.|.++++|- +.+|+.+.
T Consensus 157 ~vvIG~~~~IG~~v~I~~gvtig~~~~~~~~~~~~IGd~v~IGaga~Il~gv~IG~~a 214 (267)
T 1ssq_A 157 GIVVGETSVIENDVSILQGVTLGGTGKESGDRHPKVREGVMIGAGAKILGNIEVGKYA 214 (267)
T ss_dssp TCEECTTCEECTTCEECTTCEEECCSSSCSSCSCEECTTCEECTTCEEESSCEECTTC
T ss_pred ceEECCeeEECCCCEEcCCcEECCCcccCCCCCeEECCCeEEcCCCEEeCCcEECCCC
Confidence 455555666666666666666653 244455555555543 34454443
No 146
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=79.25 E-value=0.71 Score=45.72 Aligned_cols=33 Identities=18% Similarity=0.155 Sum_probs=15.2
Q ss_pred eEEECCCcEEeeeEEEE--ecCCCceeeCCCCeee
Q 012172 427 DVWFGANITLKGKVTIA--AKSGEKLEIPDGAVLE 459 (469)
Q Consensus 427 ~v~fg~~V~i~g~~~I~--~~~~~~~~I~~~s~le 459 (469)
+|++|++|.|+++|+|. ...|+.++|.++|++-
T Consensus 218 ~v~IGd~v~IG~~a~I~~gv~IG~g~vIgagsvV~ 252 (316)
T 3tk8_A 218 PVIIEDNCFIGARSEVVEGVIVEENSVISMGVYLG 252 (316)
T ss_dssp CCEECTTCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred CcEECCCCEECCCCEEcCCCEECCCCEEcCCCEEc
Confidence 45555555555555443 2233444444444443
No 147
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=79.12 E-value=0.7 Score=42.61 Aligned_cols=38 Identities=21% Similarity=0.333 Sum_probs=25.9
Q ss_pred eEEEeeEEECCCcEEeeeEEEE--ecCCCceeeCCCCeee
Q 012172 422 LKVTGDVWFGANITLKGKVTIA--AKSGEKLEIPDGAVLE 459 (469)
Q Consensus 422 l~v~G~v~fg~~V~i~g~~~I~--~~~~~~~~I~~~s~le 459 (469)
+.+.|+|++|++|.|+.+|+|. ...|+.++|.++|++-
T Consensus 106 ~~~~g~v~IG~~v~IG~~a~I~~gv~IG~~~iIgagsvV~ 145 (212)
T 3eev_A 106 FTRSGDTIIGHDVWIGTEAMIMPGVKIGHGAIIASRSVVT 145 (212)
T ss_dssp CCCCCCEEECSSCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred cccCCCeEECCCCEECCCCEEcCCCEECCCCEECCCCEEc
Confidence 4456677777777777777766 4566677777777764
No 148
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=79.06 E-value=1.1 Score=44.14 Aligned_cols=46 Identities=20% Similarity=0.134 Sum_probs=25.1
Q ss_pred ceEEEeeEEECCCcEEeeeEEEEe----------cCCCceeeCCCCe-eecceecCC
Q 012172 421 SLKVTGDVWFGANITLKGKVTIAA----------KSGEKLEIPDGAV-LENKEINGP 466 (469)
Q Consensus 421 ~l~v~G~v~fg~~V~i~g~~~I~~----------~~~~~~~I~~~s~-le~~~v~~~ 466 (469)
.++|..++.+|++|.|..++.|.+ ..|+.+.|.++++ +++++|+.+
T Consensus 170 ~~~Ig~~~~IG~~v~I~~~~~i~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG~~ 226 (304)
T 3eg4_A 170 WATVGSCAQIGKNVHLSGGVGIGGVLEPMQAGPTIIEDNCFIGARSEVVEGCIVREG 226 (304)
T ss_dssp TEEECTTCEECTTCEECTTCEECCCCSSTTCCCCEECTTCEECTTCEECTTCEECTT
T ss_pred CcEECCCCccCCCcEECCCCEECCccccCccCCeEEcCCCEECCCCEEcCCcEECCC
Confidence 455555666677777766665532 2444455555553 344555444
No 149
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=76.72 E-value=1.9 Score=42.13 Aligned_cols=46 Identities=22% Similarity=0.255 Sum_probs=22.5
Q ss_pred ceEEEeeEEECCCcEEeeeEEEEe----------cCCCceeeCCCCeee-cceecCC
Q 012172 421 SLKVTGDVWFGANITLKGKVTIAA----------KSGEKLEIPDGAVLE-NKEINGP 466 (469)
Q Consensus 421 ~l~v~G~v~fg~~V~i~g~~~I~~----------~~~~~~~I~~~s~le-~~~v~~~ 466 (469)
.++|..++++|+||+|..+|+|.+ ..|+.+.|.+++.|- +.+|+.+
T Consensus 177 gvvIG~~~~IG~~v~I~~gvtLg~~~~~~~~~~~~IGd~v~IGaga~Ilggv~IG~~ 233 (289)
T 1t3d_A 177 GIVVGETAVIENDVSILQSVTLGGTGKSGGDRHPKIREGVMIGAGAKILGNIEVGRG 233 (289)
T ss_dssp TCEECTTCEECSSCEECTTCEEECCSSSCSSCSCEECTTCEECTTCEEESSCEECTT
T ss_pred ceEECCCcEECCCCEEcCCcEECCCccccCCCCeEECCCeEECCCCEEecCcEECCC
Confidence 344444555555555555555542 244445555555443 3444444
No 150
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=76.64 E-value=1.4 Score=42.56 Aligned_cols=23 Identities=30% Similarity=0.323 Sum_probs=15.1
Q ss_pred CceEEEeeEEECCCcEEeeeEEE
Q 012172 420 DSLKVTGDVWFGANITLKGKVTI 442 (469)
Q Consensus 420 ~~l~v~G~v~fg~~V~i~g~~~I 442 (469)
..++|..++.+|++|.|..+++|
T Consensus 144 ~~~~Ig~~~~IG~~v~I~~~~~i 166 (276)
T 3gos_A 144 TWATVGSCAQIGKNVHLSGGVGI 166 (276)
T ss_dssp TTEEECTTCEECTTCEECTTCEE
T ss_pred CCCEECCCCEECCCCEECCCCEE
Confidence 34555556777777777776666
No 151
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=75.62 E-value=2.1 Score=42.28 Aligned_cols=21 Identities=24% Similarity=0.294 Sum_probs=9.9
Q ss_pred CCCceeeCCCCeee-cceecCC
Q 012172 446 SGEKLEIPDGAVLE-NKEINGP 466 (469)
Q Consensus 446 ~~~~~~I~~~s~le-~~~v~~~ 466 (469)
.|+.+.|.++++|- +.+|+.|
T Consensus 226 IGd~v~IGaga~Ilggv~IG~~ 247 (313)
T 3q1x_A 226 VGDYVTIGTGAKVLGNIIVGSH 247 (313)
T ss_dssp ECSSCEECTTCEEESSCEECSS
T ss_pred ECCCCEECCCCEECCCcEECCC
Confidence 44445555555442 3444443
No 152
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=74.08 E-value=0.99 Score=41.86 Aligned_cols=15 Identities=13% Similarity=0.142 Sum_probs=6.3
Q ss_pred eEEECCCcEEeeeEE
Q 012172 427 DVWFGANITLKGKVT 441 (469)
Q Consensus 427 ~v~fg~~V~i~g~~~ 441 (469)
++.+|++|.|..+|+
T Consensus 66 ~v~IG~~~~Ig~~v~ 80 (220)
T 4hur_A 66 KLIIGRFCSIGPGTT 80 (220)
T ss_dssp CEEECSSCEECTTCE
T ss_pred CeEECCCCEECCCCE
Confidence 344444444444443
No 153
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=73.67 E-value=1.4 Score=43.55 Aligned_cols=31 Identities=13% Similarity=0.241 Sum_probs=13.4
Q ss_pred EEECCCcEEeeeEEEEecCCCceeeCCCCee
Q 012172 428 VWFGANITLKGKVTIAAKSGEKLEIPDGAVL 458 (469)
Q Consensus 428 v~fg~~V~i~g~~~I~~~~~~~~~I~~~s~l 458 (469)
|++|++|.|+.+++|-...|+.++|.+||++
T Consensus 234 V~IGDnv~IGanAtIgVtIGd~~iIGAGSVV 264 (332)
T 3fsy_A 234 ISIGKRCLLGANSGLGISLGDDCVVEAGLYV 264 (332)
T ss_dssp CEECTTCEECTTCEECSCBCSSCEECTTCEE
T ss_pred eEECCCCEECCCCEEeeEECCCCEECCCCEE
Confidence 4444444444444442233334444444443
No 154
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=73.45 E-value=1.2 Score=41.33 Aligned_cols=39 Identities=15% Similarity=0.274 Sum_probs=26.9
Q ss_pred eEEEeeEEECCCcEEeeeEEEE--ecCCCceeeCCCCeeec
Q 012172 422 LKVTGDVWFGANITLKGKVTIA--AKSGEKLEIPDGAVLEN 460 (469)
Q Consensus 422 l~v~G~v~fg~~V~i~g~~~I~--~~~~~~~~I~~~s~le~ 460 (469)
..+.|.+++|++|.|+++|+|. +..|+.+.|.++|++-.
T Consensus 105 ~~~~~~v~IG~~v~IG~~a~I~~gv~Ig~~~~IgagsvV~~ 145 (212)
T 1xat_A 105 YQPAGDTLIGHEVWIGTEAMFMPGVRVGHGAIIGSRALVTG 145 (212)
T ss_dssp CCCCCCEEECTTCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred ceecCCeEECCCCEECCCCEEeCCCEECCCCEECCCCEEcc
Confidence 4456677777777777777776 45666677777777643
No 155
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=72.37 E-value=1.8 Score=42.92 Aligned_cols=39 Identities=15% Similarity=0.208 Sum_probs=27.1
Q ss_pred EEECCCcEEeeeEEEEe----------cCCCceeeCCCCeeecceecCCC
Q 012172 428 VWFGANITLKGKVTIAA----------KSGEKLEIPDGAVLENKEINGPG 467 (469)
Q Consensus 428 v~fg~~V~i~g~~~I~~----------~~~~~~~I~~~s~le~~~v~~~~ 467 (469)
+++|++|.|.++|+|-+ ..|+.+.|.+++.| +..|+.++
T Consensus 208 v~IGd~v~IgpGa~IgG~~~~~~~~~V~IGDnv~IGanAtI-gVtIGd~~ 256 (332)
T 3fsy_A 208 VVVGDGSDVGGGASIMGTLSGGGTHVISIGKRCLLGANSGL-GISLGDDC 256 (332)
T ss_dssp CEECTTCEECTTCEECSBCC---CCBCEECTTCEECTTCEE-CSCBCSSC
T ss_pred eEECCCCEECCCCEEcCCCCCCCccceEECCCCEECCCCEE-eeEECCCC
Confidence 67777777777776643 36677778888888 76666654
No 156
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=70.57 E-value=2.2 Score=42.48 Aligned_cols=31 Identities=13% Similarity=0.251 Sum_probs=14.3
Q ss_pred EEECCCcEEeeeEEEEecCCCceeeCCCCee
Q 012172 428 VWFGANITLKGKVTIAAKSGEKLEIPDGAVL 458 (469)
Q Consensus 428 v~fg~~V~i~g~~~I~~~~~~~~~I~~~s~l 458 (469)
|++|++|.|+.+++|-...|+.++|.+||++
T Consensus 257 V~IGdnv~IGAnAtIGVtIGd~~iIGAGSVV 287 (347)
T 3r5d_A 257 ISVGEGCLIGANAGIGIPLGDRNIVEAGLYI 287 (347)
T ss_dssp CEECTTCEECTTCEECSCBCTTCEECTTCEE
T ss_pred eEECCCCEECCCCEEeeEECCCCEECCCCEE
Confidence 4455555555554443334444444444444
No 157
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=70.38 E-value=2.1 Score=42.69 Aligned_cols=40 Identities=20% Similarity=0.219 Sum_probs=27.0
Q ss_pred EEECCCcEEeeeEEEEe----------cCCCceeeCCCCeeecceecCCCC
Q 012172 428 VWFGANITLKGKVTIAA----------KSGEKLEIPDGAVLENKEINGPGD 468 (469)
Q Consensus 428 v~fg~~V~i~g~~~I~~----------~~~~~~~I~~~s~le~~~v~~~~~ 468 (469)
+++|++|.|.++|+|-+ ..|+.+.|.++++| +..|+.++.
T Consensus 231 v~IGdnv~IgpGa~IgG~~~~~~~~~V~IGdnv~IGAnAtI-GVtIGd~~i 280 (347)
T 3r5d_A 231 VFVGKGSDLGGGCSTMGTLSGGGNIVISVGEGCLIGANAGI-GIPLGDRNI 280 (347)
T ss_dssp CEECTTEEECTTCEECC------CCCCEECTTCEECTTCEE-CSCBCTTCE
T ss_pred EEECCCCEECCCCEEccccCCCCccceEECCCCEECCCCEE-eeEECCCCE
Confidence 56666666666666642 46777888888888 777766543
No 158
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=69.73 E-value=3.9 Score=37.41 Aligned_cols=13 Identities=31% Similarity=0.713 Sum_probs=4.7
Q ss_pred eEEEeeEEECCCc
Q 012172 422 LKVTGDVWFGANI 434 (469)
Q Consensus 422 l~v~G~v~fg~~V 434 (469)
++|.-+|++|.++
T Consensus 112 v~IG~~v~IG~~a 124 (212)
T 3eev_A 112 TIIGHDVWIGTEA 124 (212)
T ss_dssp EEECSSCEECTTC
T ss_pred eEECCCCEECCCC
Confidence 3333333333333
No 159
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=69.39 E-value=2.5 Score=43.95 Aligned_cols=18 Identities=11% Similarity=0.110 Sum_probs=12.8
Q ss_pred hHHHHHHcCCcEEEEEeC
Q 012172 204 KLDALISQGKEYVFAANS 221 (469)
Q Consensus 204 ~L~~l~~~G~~~v~v~n~ 221 (469)
.|+.+.+.|.+.++|.-+
T Consensus 46 ~l~~~~~~g~~~i~vv~~ 63 (501)
T 3st8_A 46 VLHAIAKLAPQRLIVVLG 63 (501)
T ss_dssp HHHHHHHHCCSEEEEEEC
T ss_pred HHHHHHhCCCCEEEEEeC
Confidence 467788889887766543
No 160
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=68.70 E-value=1.6 Score=44.43 Aligned_cols=43 Identities=12% Similarity=0.242 Sum_probs=22.2
Q ss_pred EEEeeEEECCCcEEeeeEEEEe----------cCCCceeeCCCCeeecceecCC
Q 012172 423 KVTGDVWFGANITLKGKVTIAA----------KSGEKLEIPDGAVLENKEINGP 466 (469)
Q Consensus 423 ~v~G~v~fg~~V~i~g~~~I~~----------~~~~~~~I~~~s~le~~~v~~~ 466 (469)
+|..+|.+|++|.|.+++.|.+ ..|+.+.|.++|+ .+.+|+.+
T Consensus 260 ~Ig~~vvIGdnv~Ig~ga~I~g~l~g~~~~~VvIGdnv~IGagAv-~GV~IGdg 312 (387)
T 2rij_A 260 RISSSAIVGEGSDVGGGASILGVLSGTSGNAISVGKACLLGANSV-TGIPLGDN 312 (387)
T ss_dssp EECTTCEECTTCEECTTCEECCBCSSTTCCBCEECTTCEECTTCE-ECSCBCTT
T ss_pred EECCCCEECCCCEECCCceEcceecCCCccCeEEeCCCEECCCCc-CCcEECCC
Confidence 4444566666666666664321 2344445555555 55555444
No 161
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=66.78 E-value=2.5 Score=41.74 Aligned_cols=46 Identities=20% Similarity=0.151 Sum_probs=25.0
Q ss_pred ceEEEeeEEECCCcEEeeeEEEEe----------cCCCceeeCCCCee-ecceecCC
Q 012172 421 SLKVTGDVWFGANITLKGKVTIAA----------KSGEKLEIPDGAVL-ENKEINGP 466 (469)
Q Consensus 421 ~l~v~G~v~fg~~V~i~g~~~I~~----------~~~~~~~I~~~s~l-e~~~v~~~ 466 (469)
.++|..++.+|++|.|.+++.|.. ..|+.+.|.++++| ++++|+.+
T Consensus 186 ~~~Ig~~~~IG~~v~I~~~~~I~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG~g 242 (316)
T 3tk8_A 186 WATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPVIIEDNCFIGARSEVVEGVIVEEN 242 (316)
T ss_dssp TEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECTTCEECTTCEECTTCEECTT
T ss_pred ceEECCCCEECCCCEEcCCCEECCCcccccCCCcEECCCCEECCCCEEcCCCEECCC
Confidence 455656666777777766665543 24444555555543 34444443
No 162
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=64.27 E-value=2.4 Score=39.55 Aligned_cols=37 Identities=30% Similarity=0.428 Sum_probs=21.7
Q ss_pred EEEeeEEECCCcEEeeeEEEE--ecCCCceeeCCCCeee
Q 012172 423 KVTGDVWFGANITLKGKVTIA--AKSGEKLEIPDGAVLE 459 (469)
Q Consensus 423 ~v~G~v~fg~~V~i~g~~~I~--~~~~~~~~I~~~s~le 459 (469)
.+.|+|++|++|.|+.+++|. ...|+.+.|.++|++.
T Consensus 114 ~~~g~v~Igd~v~IG~~a~I~~gv~IG~~~~IgagsvV~ 152 (219)
T 4e8l_A 114 PLKGDIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVT 152 (219)
T ss_dssp CCCCCEEECSSCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred cccCCcEECCCeEECCCCEEcCCCEECCCCEECCCCEEc
Confidence 345566666666666666555 2345556666666664
No 163
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=63.41 E-value=2.3 Score=39.20 Aligned_cols=38 Identities=24% Similarity=0.411 Sum_probs=22.0
Q ss_pred eEEEeeEEECCCcEEeeeEEEE--ecCCCceeeCCCCeee
Q 012172 422 LKVTGDVWFGANITLKGKVTIA--AKSGEKLEIPDGAVLE 459 (469)
Q Consensus 422 l~v~G~v~fg~~V~i~g~~~I~--~~~~~~~~I~~~s~le 459 (469)
..+.|+|++|++|.|+.+++|. ...|+.+.|.++|++-
T Consensus 108 ~~~~~~v~Ig~~v~IG~~a~I~~gv~Ig~~~~Igags~V~ 147 (209)
T 1mr7_A 108 LPIKGDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVV 147 (209)
T ss_dssp SCCCCCEEECSSCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred ccccCCcEECCCCEEcCCCEEcCCCEECCCCEEcCCCEEc
Confidence 3445566666666666666665 2345556666666654
No 164
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=34.62 E-value=1.4e+02 Score=26.20 Aligned_cols=61 Identities=20% Similarity=0.346 Sum_probs=31.4
Q ss_pred CCccc--cccCCCCchHHHHHHHHHHhhhhcCCcccEEEecCCCChHHHHHHHHHhcCCCCceEEEE
Q 012172 97 GPKSV--IEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFN 161 (469)
Q Consensus 97 ~PK~l--~~v~~gks~L~~~~~~i~~l~~~~~~~iplviMtS~~t~e~t~~~~~~~~g~~~~i~~f~ 161 (469)
.||.. +|+.....+|.-.++.+.+.. + .+.-++|.....| +.|.+.++++......+.++.
T Consensus 4 ~p~vsViIp~yn~~~~l~~~l~Sl~~q~--~-~~~eiIvvDd~S~-d~t~~~~~~~~~~~~~i~~i~ 66 (240)
T 3bcv_A 4 IPKVSVIVPIYNVEKYLDQCVQALLAQT--L-SDIEIILIDDESP-DNCPKICDDYAAQYPNIKVIH 66 (240)
T ss_dssp CCSEEEEEEESSCTTTHHHHHHHHHTCS--S-SSEEEEEEECCCS-SSHHHHHHHHHHHCSSEEEEE
T ss_pred CCcEEEEEecCCCHHHHHHHHHHHHhCc--C-CCeEEEEEECCCC-cCHHHHHHHHHhhCCCEEEEE
Confidence 46653 355456677877777775532 1 2455666544323 445566655432112455544
No 165
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=28.68 E-value=24 Score=32.44 Aligned_cols=35 Identities=9% Similarity=0.170 Sum_probs=20.3
Q ss_pred CceEEEeeEEECCCcEEeeeEEEEecCCCceeeCCCCeeec
Q 012172 420 DSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLEN 460 (469)
Q Consensus 420 ~~l~v~G~v~fg~~V~i~g~~~I~~~~~~~~~I~~~s~le~ 460 (469)
..++|.+.|++|+++.|++++++.. .||++++.-|
T Consensus 121 ~~a~I~~gv~Ig~~~~IgagsvV~~------~vp~~~~~~G 155 (212)
T 1xat_A 121 TEAMFMPGVRVGHGAIIGSRALVTG------DVEPYAIVGG 155 (212)
T ss_dssp TTCEECTTCEECTTCEECTTCEECS------CBCTTEEEET
T ss_pred CCCEEeCCCEECCCCEECCCCEEcc------cCCCCcEEEc
Confidence 4555555666666666666655542 2667666544
No 166
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=28.60 E-value=28 Score=35.19 Aligned_cols=31 Identities=13% Similarity=0.180 Sum_probs=18.3
Q ss_pred EEECCCcEEeeeEEEE-ecCCCceeeCCCCeee
Q 012172 428 VWFGANITLKGKVTIA-AKSGEKLEIPDGAVLE 459 (469)
Q Consensus 428 v~fg~~V~i~g~~~I~-~~~~~~~~I~~~s~le 459 (469)
|++|++|.|+.+++ . ...|+.++|.++|++.
T Consensus 291 VvIGdnv~IGagAv-~GV~IGdgavIGAGsVVt 322 (387)
T 2rij_A 291 ISVGKACLLGANSV-TGIPLGDNCIVDAGIAVL 322 (387)
T ss_dssp CEECTTCEECTTCE-ECSCBCTTCEECTTCEEC
T ss_pred eEEeCCCEECCCCc-CCcEECCCCEECCCCEEC
Confidence 56666666666666 3 3455555566665554
No 167
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=27.20 E-value=34 Score=30.71 Aligned_cols=40 Identities=5% Similarity=0.037 Sum_probs=27.9
Q ss_pred ceeEEEEc--CCCCCcCCCCCCcccccc---CCCCchHHHHHHHHHHhh
Q 012172 79 KLVVLKLN--GGLGTTMGCTGPKSVIEV---RNGLTFLDLIVIQIENLN 122 (469)
Q Consensus 79 k~avviLA--GG~GTRmg~~~PK~l~~v---~~gks~L~~~~~~i~~l~ 122 (469)
++.+|+.+ |.--|||. |.+.+- .-+++|++++++.+....
T Consensus 3 ~~~~vip~k~g~~KtRL~----~~l~~~~~~~l~~~ll~~vl~~l~~~~ 47 (211)
T 2i5e_A 3 AMRAVIPYKKAGAKSRLS----PVLSLQEREEFVELMLNQVISSLKGAG 47 (211)
T ss_dssp CCEEEEECCCTTTTGGGT----TTSCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ceEEEEEeCCCCCccccC----ccCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 46788888 55555554 555441 157999999999998763
No 168
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=24.61 E-value=39 Score=31.09 Aligned_cols=35 Identities=6% Similarity=0.211 Sum_probs=19.8
Q ss_pred CceEEEeeEEECCCcEEeeeEEEEecCCCceeeCCCCeeec
Q 012172 420 DSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLEN 460 (469)
Q Consensus 420 ~~l~v~G~v~fg~~V~i~g~~~I~~~~~~~~~I~~~s~le~ 460 (469)
...+|.+.|++|+++.|++++++.. .||++++.-|
T Consensus 129 ~~a~I~~gv~IG~~~~IgagsvV~~------dv~~~~~~~G 163 (219)
T 4e8l_A 129 RDVTIMPGVKIGDGAIIAAEAVVTK------NVAPYSIVGG 163 (219)
T ss_dssp TTCEECTTCEECTTCEECTTCEECS------CBCTTEEEET
T ss_pred CCCEEcCCCEECCCCEECCCCEEcc------cCCCCeEEEe
Confidence 4455555555555555555555542 3677777655
No 169
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=21.20 E-value=39 Score=30.76 Aligned_cols=35 Identities=9% Similarity=0.141 Sum_probs=20.2
Q ss_pred CceEEEeeEEECCCcEEeeeEEEEecCCCceeeCCCCeeec
Q 012172 420 DSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLEN 460 (469)
Q Consensus 420 ~~l~v~G~v~fg~~V~i~g~~~I~~~~~~~~~I~~~s~le~ 460 (469)
...+|.+.|++|+++.|++++++.. .||++++.-|
T Consensus 124 ~~a~I~~gv~Ig~~~~Igags~V~~------~v~~~~i~~G 158 (209)
T 1mr7_A 124 KDVVIMPGVKIGDGAIVAANSVVVK------DIAPYMLAGG 158 (209)
T ss_dssp TTCEECTTCEECTTCEECTTCEECS------CBCTTEEEEE
T ss_pred CCCEEcCCCEECCCCEEcCCCEEcC------CCCCCeEEEe
Confidence 4455555556666666665555542 2677777655
Done!