BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012176
(469 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LIS3|GAE6_ARATH UDP-glucuronate 4-epimerase 6 OS=Arabidopsis thaliana GN=GAE6 PE=1
SV=1
Length = 460
Score = 731 bits (1887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/462 (78%), Positives = 405/462 (87%), Gaps = 22/462 (4%)
Query: 1 MASPPDTSKTIKLERYNSYLRRLHVTKMLHSSSKLFFRATILIALVLILFFTLNHPPLSD 60
+++ DTSKT+KLERYNSYLR++H TK+L++SSK+ FRAT+L+ALVL+L F +N+PPLSD
Sbjct: 3 LSATADTSKTVKLERYNSYLRKIHSTKVLNASSKVLFRATLLVALVLVLIFAINYPPLSD 62
Query: 61 NTGESGDNNSNNKNNPRNLFTHQHSLLSSSFFSSSFS---TGGAEWEKQVRHSATPRRPN 117
+ + + H+ S LS+ FSSS S GGA WEK+VR S+T +RP+
Sbjct: 63 SRAAAAHH------------LHRRSFLSTGLFSSSSSSSSIGGAAWEKRVRQSSTAKRPH 110
Query: 118 GMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEG 177
G++VLVTGAAGFVGSHCSLAL+KRGDGVLG DNFN YYDPSLKRARQ+LL+K QVFIVEG
Sbjct: 111 GLSVLVTGAAGFVGSHCSLALRKRGDGVLGFDNFNDYYDPSLKRARQELLEKQQVFIVEG 170
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
DLND PLL KLFDVVPFTH+LHLAAQAGVRYAM+NPQSY+ASNIAGFVNLLEV K+ NPQ
Sbjct: 171 DLNDGPLLRKLFDVVPFTHILHLAAQAGVRYAMKNPQSYIASNIAGFVNLLEVAKAANPQ 230
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRF 297
P+IVWASSSSVYGLNT+ PFSE HRTDQPASLYAATKKAGEEIAHTYNHIYGL+LTGLRF
Sbjct: 231 PAIVWASSSSVYGLNTENPFSEEHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRF 290
Query: 298 FTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGA----- 352
FTVYGPWGRPDMAYFFFTKDIL GK+ID+Y+TQD++EVARDFTYIDD+VKGCVGA
Sbjct: 291 FTVYGPWGRPDMAYFFFTKDILHGKSIDIYRTQDNQEVARDFTYIDDIVKGCVGALDTAE 350
Query: 353 --TGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDVPYTH 410
TGSGGKKRG AQLRVYNLGNTSPVPVGRLVSILE LL TKAKKH+I+MPRNGDVPYTH
Sbjct: 351 KSTGSGGKKRGQAQLRVYNLGNTSPVPVGRLVSILEGLLGTKAKKHLIKMPRNGDVPYTH 410
Query: 411 ANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSYYGIQPRVKKE 452
ANVSLAYKDFGYKPTTDLAAGLRKFVKWYV YYGIQPRVKKE
Sbjct: 411 ANVSLAYKDFGYKPTTDLAAGLRKFVKWYVGYYGIQPRVKKE 452
>sp|Q9LPC1|GAE2_ARATH UDP-glucuronate 4-epimerase 2 OS=Arabidopsis thaliana GN=GAE2 PE=2
SV=1
Length = 434
Score = 574 bits (1479), Expect = e-163, Method: Compositional matrix adjust.
Identities = 284/428 (66%), Positives = 333/428 (77%), Gaps = 35/428 (8%)
Query: 23 LHVTKMLHSSSKLFFRATILIALVLILFFTLNHPPLSDNTGESGDNNSNNKNNPRNLFTH 82
LH T+ S +KL F + + L+ I F+ P+S N ++ R+L T
Sbjct: 24 LHRTRWQSSVAKLAFWSLVFFGLLFIFFY---RSPIS-----------NPDSSRRSLRT- 68
Query: 83 QHSLLSSSFFSSSFSTGGAEWEKQVRHSATPRRPNGMTVLVTGAAGFVGSHCSLALKKRG 142
+S GG WEK+VR SA R NG++VLVTGAAGFVG+H S ALK+RG
Sbjct: 69 -------------YSWGGPAWEKRVRSSARVRTRNGVSVLVTGAAGFVGTHVSAALKRRG 115
Query: 143 DGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAA 202
DGVLGLDNFN YYD SLKR+RQ LL++ VFIVEGD+ND LL KLF+VVPFTHV+HLAA
Sbjct: 116 DGVLGLDNFNDYYDTSLKRSRQALLERSGVFIVEGDINDLSLLKKLFEVVPFTHVMHLAA 175
Query: 203 QAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHR 262
QAGVRYAM+NP SYV SNIAGFVNLLEVCKS NPQP+IVWASSSSVYGLNT+VPFSE R
Sbjct: 176 QAGVRYAMENPGSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDR 235
Query: 263 TDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGK 322
TDQPASLYAATKKAGEEIAHTYNHIYGL+LTGLRFFTVYGPWGRPDMAYFFFT+DIL+GK
Sbjct: 236 TDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGK 295
Query: 323 TIDVYKTQDDREVARDFTYIDDVVKGCVGA-------TGSGGKKRGPAQLRVYNLGNTSP 375
I +++ + VARDFTYIDD+VKGC+GA TGSGGKKRG AQLRV+NLGNTSP
Sbjct: 296 AISIFEGANHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSP 355
Query: 376 VPVGRLVSILENLLNTKAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKF 435
VPV LVSILE LL KAK++++++PRNGDVP+THAN+S A ++FGYKP+TDL GL+KF
Sbjct: 356 VPVTDLVSILERLLKVKAKRNMMKLPRNGDVPFTHANISSAQREFGYKPSTDLQTGLKKF 415
Query: 436 VKWYVSYY 443
V+WY+ YY
Sbjct: 416 VRWYLGYY 423
>sp|O81312|GAE3_ARATH UDP-glucuronate 4-epimerase 3 OS=Arabidopsis thaliana GN=GAE3 PE=2
SV=1
Length = 430
Score = 571 bits (1471), Expect = e-162, Method: Compositional matrix adjust.
Identities = 281/428 (65%), Positives = 330/428 (77%), Gaps = 33/428 (7%)
Query: 23 LHVTKMLHSSSKLFFRATILIALVLILFFTLNHPPLSDNTGESGDNNSNNKNNPRNLFTH 82
H T+ S +KL F + + + L+ I F+ P+S N + + R+L T
Sbjct: 21 FHRTRWQSSVAKLAFWSLVFVGLIFIFFY---RSPVSSNPADP---------SRRSLRT- 67
Query: 83 QHSLLSSSFFSSSFSTGGAEWEKQVRHSATPRRPNGMTVLVTGAAGFVGSHCSLALKKRG 142
+S GG WEK+VR SA R G +VLVTGAAGFVG+H S ALK+RG
Sbjct: 68 -------------YSWGGPAWEKRVRSSARLRTRRGFSVLVTGAAGFVGTHVSAALKRRG 114
Query: 143 DGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAA 202
DGVLGLDNFN YYDPSLKRARQ LL++ VF+VEGD+NDA LL KLF+VVPFTHV+HLAA
Sbjct: 115 DGVLGLDNFNDYYDPSLKRARQALLERSGVFVVEGDINDAALLKKLFEVVPFTHVMHLAA 174
Query: 203 QAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHR 262
QAGVRYAM+NP SYV SNIAGFVNLLEVCKS NPQP+IVWASSSSVYGLNT+VPFSE R
Sbjct: 175 QAGVRYAMENPSSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDR 234
Query: 263 TDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGK 322
TDQPASLYAATKKAGEEIAHTYNHIYGL+LTGLRFFTVYGPWGRPDMAYFFFT+DIL+GK
Sbjct: 235 TDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGK 294
Query: 323 TIDVYKTQDDREVARDFTYIDDVVKGCVGA-------TGSGGKKRGPAQLRVYNLGNTSP 375
I +++ + VARDFTYIDD+VKGC+GA TGSGGKKRG AQLRV+NLGNTSP
Sbjct: 295 AISIFEGVNHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSP 354
Query: 376 VPVGRLVSILENLLNTKAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKF 435
VPV LV+ILE LL KAK++++++PRNGDV +THAN+S A ++ GYKPTTDL GL+KF
Sbjct: 355 VPVTDLVTILERLLKVKAKRNIMKLPRNGDVQFTHANISSAQRELGYKPTTDLQTGLKKF 414
Query: 436 VKWYVSYY 443
+WY+ YY
Sbjct: 415 ARWYLGYY 422
>sp|O22141|GAE4_ARATH UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thaliana GN=GAE4 PE=1
SV=1
Length = 437
Score = 568 bits (1465), Expect = e-161, Method: Compositional matrix adjust.
Identities = 267/354 (75%), Positives = 306/354 (86%), Gaps = 9/354 (2%)
Query: 99 GGAEWEKQVRHSATPRRP--NGMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYD 156
GG WEK++R SA R NG+TVLVTGAAGFVG+H S ALK+RGDGV+GLDNFN YYD
Sbjct: 75 GGPAWEKRLRSSARIRTSTNNGITVLVTGAAGFVGTHVSAALKRRGDGVIGLDNFNDYYD 134
Query: 157 PSLKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSY 216
PSLKRAR+ LL++ +FIVEGD+ND LL KLF +V FTHV+HLAAQAGVRYAM+NP SY
Sbjct: 135 PSLKRARRALLERSGIFIVEGDINDVELLRKLFKIVSFTHVMHLAAQAGVRYAMENPSSY 194
Query: 217 VASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKA 276
V SNIAGFVNLLE+CKSVNPQP+IVWASSSSVYGLNT+VPFSE +TDQPASLYAATKKA
Sbjct: 195 VHSNIAGFVNLLEICKSVNPQPAIVWASSSSVYGLNTKVPFSEKDKTDQPASLYAATKKA 254
Query: 277 GEEIAHTYNHIYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVA 336
GEEIAHTYNHIYGL+LTGLRFFTVYGPWGRPDMAYFFFTKDIL+GK+I ++++ + VA
Sbjct: 255 GEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILKGKSISIFESANHGTVA 314
Query: 337 RDFTYIDDVVKGCVGA-------TGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLL 389
RDFTYIDD+VKGC+ A TGSGGKKRGPAQLRV+NLGNTSPVPV LV ILE L
Sbjct: 315 RDFTYIDDIVKGCLAALDTAEKSTGSGGKKRGPAQLRVFNLGNTSPVPVSDLVRILERQL 374
Query: 390 NTKAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSYY 443
KAKK++I+MPRNGDVP+THAN+SLA ++ GYKPTTDL GL+KFV+WY+SYY
Sbjct: 375 KVKAKKNLIKMPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWYLSYY 428
>sp|Q9STI6|GAE5_ARATH UDP-glucuronate 4-epimerase 5 OS=Arabidopsis thaliana GN=GAE5 PE=2
SV=1
Length = 436
Score = 542 bits (1397), Expect = e-153, Method: Compositional matrix adjust.
Identities = 269/361 (74%), Positives = 305/361 (84%), Gaps = 10/361 (2%)
Query: 93 SSSFST---GGAEWEKQVRHSATPRRPNGMTVLVTGAAGFVGSHCSLALKKRGDGVLGLD 149
SSS S GG+ WEKQVR SA PR G+TVLVTGA+GFVG+H S+AL++RGDGVLGLD
Sbjct: 67 SSSISAAKYGGSHWEKQVRKSARPRSHGGLTVLVTGASGFVGTHVSIALRRRGDGVLGLD 126
Query: 150 NFNSYYDPSLKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYA 209
NFN YYDP LKRARQ LL++ VF+VEGD+NDA LL KLFDVV FTHV+HLAAQAGVRYA
Sbjct: 127 NFNRYYDPKLKRARQGLLERSGVFVVEGDINDAVLLRKLFDVVLFTHVMHLAAQAGVRYA 186
Query: 210 MQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASL 269
MQNP SYV SNIAGFVNLLEV KS NPQP+IVWASSSSVYGLN++VPFSE RTDQPASL
Sbjct: 187 MQNPGSYVNSNIAGFVNLLEVSKSANPQPAIVWASSSSVYGLNSKVPFSEKDRTDQPASL 246
Query: 270 YAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKT 329
YAATKKAGE IAHTYNHIYGL+LTGLRFFTVYGPWGRPDMAYFFFTKDIL+GKTI V+++
Sbjct: 247 YAATKKAGEGIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILKGKTITVFES 306
Query: 330 QDDREVARDFTYIDDVVKGCVGA-------TGSGGKKRGPAQLRVYNLGNTSPVPVGRLV 382
D VARDFTYIDD+VKGC+GA TGSGGKK+GPA R+YNLGNTSPVPV +LV
Sbjct: 307 PDKGSVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKKGPAMFRIYNLGNTSPVPVTKLV 366
Query: 383 SILENLLNTKAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSY 442
+ILE LL KAKK ++ +PRNGDV +THAN++LA + GYKP DL GL+KFVKWY+ +
Sbjct: 367 TILEKLLKMKAKKKIMPLPRNGDVEFTHANITLAQAELGYKPAVDLETGLKKFVKWYMGF 426
Query: 443 Y 443
Y
Sbjct: 427 Y 427
>sp|Q9M0B6|GAE1_ARATH UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thaliana GN=GAE1 PE=1
SV=1
Length = 429
Score = 536 bits (1380), Expect = e-151, Method: Compositional matrix adjust.
Identities = 280/453 (61%), Positives = 332/453 (73%), Gaps = 43/453 (9%)
Query: 5 PDTSKTIKLERYNSYLRRLHVTKMLHSSSKLFFRATILIALVLILFFTLNHPPLSDNTGE 64
P T K++R N R+LH + S+S +F A LIAL
Sbjct: 10 PSTPGKFKIDRSN---RQLH--RCFASTSTMFLWALFLIALTA----------------- 47
Query: 65 SGDNNSNNKNNPRNLFTHQHSLLSSSFFSSSFSTGGAEWEKQVRHSATPRRPNGMTVLVT 124
+ + Q + S S + ++ S GG +WEKQVR SA R G++VLVT
Sbjct: 48 -------------SYLSFQSFVDSGSRYLTA-SWGGIQWEKQVRTSAQIHRSGGISVLVT 93
Query: 125 GAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLNDAPL 184
GA GFVGSH SLAL+KRGDGV+GLDNFN+YYDPSLKRAR+ LL +F+VEGDLNDA L
Sbjct: 94 GATGFVGSHVSLALRKRGDGVVGLDNFNNYYDPSLKRARRSLLSSRGIFVVEGDLNDAKL 153
Query: 185 LTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWAS 244
L KLFDVV FTHV+HLAAQAGVRYA++NPQSYV SNIAG VNLLE+CK+ NPQP+IVWAS
Sbjct: 154 LAKLFDVVAFTHVMHLAAQAGVRYALENPQSYVHSNIAGLVNLLEICKAANPQPAIVWAS 213
Query: 245 SSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGPW 304
SSSVYGLN +VPFSES RTDQPASLYAATKKAGEEI HTYNHIYGLA+TGLRFFTVYGPW
Sbjct: 214 SSSVYGLNEKVPFSESDRTDQPASLYAATKKAGEEITHTYNHIYGLAITGLRFFTVYGPW 273
Query: 305 GRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGA-------TGSGG 357
GRPDMAYF FT++ILQGK I +Y+ ++ ++ARDFTYIDD+VKGC+G+ TGSGG
Sbjct: 274 GRPDMAYFSFTRNILQGKPITIYRGKNRVDLARDFTYIDDIVKGCLGSLDSSGKSTGSGG 333
Query: 358 KKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDVPYTHANVSLAY 417
KKRG A R++NLGNTSPV V LV ILE L KAK++ + MP NGDVP+THAN+S A
Sbjct: 334 KKRGAAPYRIFNLGNTSPVTVPILVDILEKHLKVKAKRNFVEMPGNGDVPFTHANISSAR 393
Query: 418 KDFGYKPTTDLAAGLRKFVKWYVSYYGIQPRVK 450
+FGYKPTTDL GL+KFV+WY+SYYG + K
Sbjct: 394 NEFGYKPTTDLETGLKKFVRWYLSYYGYNTKAK 426
>sp|P39858|CAPI_STAAU Protein CapI OS=Staphylococcus aureus GN=capI PE=3 SV=1
Length = 334
Score = 292 bits (747), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 160/340 (47%), Positives = 215/340 (63%), Gaps = 23/340 (6%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M +L+TG AGF+GSH + L K+G V+G+D+ N YY SLK R K + K +
Sbjct: 1 MKILITGTAGFIGSHLAKKLIKQGHYVIGVDSINDYYSVSLKEDRLKSIGKENFTFNKVK 60
Query: 179 LNDAPLLTKLF-DVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
L + L+K+F D P V++LAAQAGVRY+++NP++Y+ SNI GF+N+LE + N Q
Sbjct: 61 LENYDDLSKVFVDEQPEV-VVNLAAQAGVRYSIENPRTYIDSNIVGFMNILECSRHFNIQ 119
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRF 297
++++ASSSSVYG NT PFS S D P SLYAATKK+ E +AHTY+H+Y L TGLRF
Sbjct: 120 -NLIYASSSSVYGANTSKPFSTSDNIDHPLSLYAATKKSNELMAHTYSHLYNLPTTGLRF 178
Query: 298 FTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVV----------- 346
FTVYGPWGRPDMA F FTK I+ + IDVY + + RDFTY+DD+V
Sbjct: 179 FTVYGPWGRPDMALFKFTKAIVNDQAIDVYNHGN---MMRDFTYVDDIVEAISRLVKKPA 235
Query: 347 ---KGCVGATGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRN 403
K GA G P +VYN+GN SPV + V +EN L +A+K+ + + +
Sbjct: 236 SPNKEWSGADPDPGSSYAP--YKVYNIGNNSPVRLMEFVEAIENKLGKEARKNYMDL-QP 292
Query: 404 GDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSYY 443
GDVP T+ANV ++D +KP T + G+ KFV WY+ YY
Sbjct: 293 GDVPETYANVDDLFRDIDFKPETTIQDGVNKFVDWYLEYY 332
>sp|Q04871|YCL2_ECO11 Uncharacterized 37.6 kDa protein in cld 5'region OS=Escherichia
coli O111:H- PE=3 SV=1
Length = 334
Score = 282 bits (722), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 154/339 (45%), Positives = 208/339 (61%), Gaps = 17/339 (5%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M LVTGAAGF+G H S L + G V+G+DN N YYD SLK+AR +LL + + D
Sbjct: 1 MKYLVTGAAGFIGFHVSKRLLEAGHQVVGIDNLNDYYDVSLKQARLELLAQPGFQFHKID 60
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
L D +T LF F V + VRY+++NP +Y SN+ GF+N+LE C+ N
Sbjct: 61 LADREGMTDLFASGHFERVFISPHRLAVRYSLENPHAYADSNLTGFLNILEGCRH-NKIQ 119
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFF 298
+++ASSSSVYGLN ++PFS D P SLYAATKKA E +AHTY+H+YGL TGLRFF
Sbjct: 120 HLLYASSSSVYGLNRKMPFSTDDSVDHPVSLYAATKKANELMAHTYSHLYGLPATGLRFF 179
Query: 299 TVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCV-------- 350
TVYGPWGRPDMA F FTK +L+GK+IDVY ++ RDFTYIDD+ + +
Sbjct: 180 TVYGPWGRPDMALFKFTKAMLEGKSIDVYNYG---KMKRDFTYIDDIAEAIIRLQDVIPH 236
Query: 351 ----GATGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDV 406
+G A RVYN+GN+SPV + + LE+ L +AKK+++ + + GDV
Sbjct: 237 ADTQWTVETGTPAASIAPYRVYNIGNSSPVELMDYIQALEDALGIEAKKNMLPL-QPGDV 295
Query: 407 PYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSYYGI 445
T A+ Y+ G+ P T + G++ FV WY +Y +
Sbjct: 296 LETSADTKALYEVIGFTPETTVKDGVKNFVNWYRDFYKV 334
>sp|Q58455|Y1055_METJA Uncharacterized protein MJ1055 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1055 PE=3 SV=1
Length = 326
Score = 265 bits (678), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 140/325 (43%), Positives = 208/325 (64%), Gaps = 14/325 (4%)
Query: 120 TVLVTGAAGFVGSHCSLALKKRGDG--VLGLDNFNSYYDPSLKRARQKLLQKHQVF-IVE 176
+LVTG+AGF+G H S L + V+G+DN N+YY+P LK R ++L+ ++ + ++
Sbjct: 5 NILVTGSAGFIGFHLSKYLMDNYEDLKVIGIDNLNNYYNPVLKEKRNEILKNYENYTFIK 64
Query: 177 GDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNP 236
D +D L + ++HL AQAGVRY++QNP +Y+ SN G +N+ E + +
Sbjct: 65 LDFSDWDDLVENLKDKEIDLIVHLGAQAGVRYSLQNPWAYIKSNEMGTLNIFEFARRFDI 124
Query: 237 QPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLR 296
+ +V+ASSSSVYG N ++PFSE R D+P SLYA+TK++ E +AH Y+H+YG+ + GLR
Sbjct: 125 E-KVVYASSSSVYGGNRKIPFSEDDRVDKPISLYASTKRSNELMAHVYHHLYGIKMIGLR 183
Query: 297 FFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGATGSG 356
FFTVYG +GRPDMAYF F K+IL GK I+VY + + RDFTYI DVV G + A
Sbjct: 184 FFTVYGEYGRPDMAYFKFAKNILLGKEIEVYNYGN---MERDFTYISDVVDGILRAI--- 237
Query: 357 GKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDVPYTHANVSLA 416
+ ++NLGN+ PV + + ++E LN KAKK + M ++GDV T+A++S +
Sbjct: 238 ---KKDFDYEIFNLGNSKPVKLMYFIELIEKYLNKKAKKKFLPM-QDGDVLRTYADLSKS 293
Query: 417 YKDFGYKPTTDLAAGLRKFVKWYVS 441
K GYKP + GL++F W++
Sbjct: 294 EKLLGYKPKVTIEEGLKRFCNWFLE 318
>sp|O54067|LPSL_RHIME UDP-glucuronate 5'-epimerase OS=Rhizobium meliloti (strain 1021)
GN=lspL PE=3 SV=2
Length = 341
Score = 248 bits (634), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 136/339 (40%), Positives = 198/339 (58%), Gaps = 19/339 (5%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVF-IVEG 177
M L+TG AGF+G H + L G V+G D YYD +LK R +LQ+ F V
Sbjct: 1 MRYLITGTAGFIGFHVAKRLIDEGHFVVGFDGMTPYYDVTLKERRHAILQRSNGFKAVTA 60
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
L D L + ++ ++HLAAQAGVRY+++NP++YV +N+ G N+LE+ K++ P+
Sbjct: 61 MLEDRAALDRAAELAEPEVIIHLAAQAGVRYSLENPKAYVDANLVGSWNMLELAKAIAPK 120
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRF 297
++ AS+SS+YG N ++PF+E+ R D+P +LYAATKK+ E +AH+Y H+Y + T RF
Sbjct: 121 -HLMLASTSSIYGANEKIPFAEADRADEPMTLYAATKKSMELMAHSYAHLYKVPTTSFRF 179
Query: 298 FTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGATG--- 354
FTVYGPWGRPDMA F F I G+ ID+Y + ++RDFTYIDD+V+ V +
Sbjct: 180 FTVYGPWGRPDMALFKFVDAIHNGRPIDIY---GEGRMSRDFTYIDDLVESIVRLSHVPP 236
Query: 355 SGGKKRGP----------AQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNG 404
S + P A RV N G PV + V +E + A +++ M + G
Sbjct: 237 SEENRVAPEKATDTLSRHAPFRVVNTGGGQPVELMTFVETVEKAVGRPAIHNMLPM-QQG 295
Query: 405 DVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSYY 443
DVP T A+ L G+KP+ + G+ +FV+WY Y
Sbjct: 296 DVPRTFASPDLLEALTGFKPSVSVEEGVARFVEWYDQNY 334
>sp|O34886|YTCB_BACSU Uncharacterized UDP-glucose epimerase YtcB OS=Bacillus subtilis
(strain 168) GN=ytcB PE=3 SV=1
Length = 316
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/331 (36%), Positives = 167/331 (50%), Gaps = 24/331 (7%)
Query: 119 MTVLVTGAAGFVGSH-CSLALKKRGDGVLGLDNF--NSYYDPSLKRARQKLLQKHQVFIV 175
M +LVTGAAGF+GSH C LK + V+G+D+F + + LK + L +K FI
Sbjct: 1 MKILVTGAAGFIGSHLCEELLKDKKHNVIGIDDFIGPTPFSLKLKNLKNLLPEKRFTFIK 60
Query: 176 EGDLN-DAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNP-QSYVASNIAGFVNLLEVCKS 233
E L D L + DV+ HLAA GVR + N Y A NI LLE C+
Sbjct: 61 ENLLTADLASLLEGVDVI-----FHLAAIPGVRSSWGNHFHPYAAHNIQALQRLLEACRE 115
Query: 234 VNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALT 293
+ Q + V+AS+SSVYG Q SE+ + P S Y TK GE++ H Y +G+ +
Sbjct: 116 HSIQ-TFVFASTSSVYG-EKQGKVSEN-TSLSPLSPYGVTKLTGEKLCHVYKQSFGIPIV 172
Query: 294 GLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGAT 353
LRFFTVYGP RPDMA+ K LQ K + ++ D + +RDFTYI D VKG
Sbjct: 173 ILRFFTVYGPRQRPDMAFHRLIKQHLQQKPLTIF---GDGQQSRDFTYISDCVKGITAVL 229
Query: 354 GSGGKKRGPAQL-RVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDVPYTHAN 412
G P + N+G V ++VS++E++ KA H G+ T A+
Sbjct: 230 GK------PHLIGETVNIGGAERASVLKVVSLIEDISGRKATLH-FSDKIAGEPSNTWAD 282
Query: 413 VSLAYKDFGYKPTTDLAAGLRKFVKWYVSYY 443
+S A + Y P T L GL + + S Y
Sbjct: 283 ISKAKQLLHYDPATSLKDGLTNEIAYLSSLY 313
>sp|Q04973|VIPB_SALTI Vi polysaccharide biosynthesis protein VipB/TviC OS=Salmonella
typhi GN=vipB PE=3 SV=1
Length = 348
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 157/328 (47%), Gaps = 17/328 (5%)
Query: 122 LVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKH--QVFIVEGDL 179
L+TG AGF+GS L V+GLDNF++ Y +L R + ++ + ++GD+
Sbjct: 19 LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI 78
Query: 180 NDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPS 239
K V + VLH AA V ++++P + ++NI GF+N+L + + S
Sbjct: 79 RKFTDCQKACKNVDY--VLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVS-S 135
Query: 240 IVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFT 299
+A+SSS YG + +P E R +P S YA TK E A + Y GLR+F
Sbjct: 136 FTYAASSSTYGDHPDLPKIE-ERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFN 194
Query: 300 VYGPWGRPDMAY-FFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKG-CVGATGSGG 357
V+G P+ AY + IL + D +RDF YI++V++ + AT +
Sbjct: 195 VFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDL 254
Query: 358 KKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMP-----RNGDVPYTHAN 412
+ +VYN+ + L ++ + LN + P R+GDV ++ A+
Sbjct: 255 ASKN----KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQAD 310
Query: 413 VSLAYKDFGYKPTTDLAAGLRKFVKWYV 440
++ Y+P D+ GL++ +KWY+
Sbjct: 311 ITKIKTFLSYEPEFDIKEGLKQTLKWYI 338
>sp|Q57664|GALE_METJA Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0211 PE=3 SV=1
Length = 305
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 148/322 (45%), Gaps = 29/322 (9%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLN 180
+LVTG AGF+GSH L + V+ LDN L + + F V D+
Sbjct: 2 ILVTGGAGFIGSHIVDKLIENNYDVIILDN--------LTTGNKNNINPKAEF-VNADIR 52
Query: 181 DAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSI 240
D L K+ + V+H AAQ VR +++NP N+ G +N+LE+ + + +
Sbjct: 53 DKDLDEKI-NFKDVEVVIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYDIDKIV 111
Query: 241 VWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTV 300
+S +VYG +P E+H + P S Y +K GEE YN +YG+ LR+ V
Sbjct: 112 FASSGGAVYGEPNYLPVDENHPIN-PLSPYGLSKYVGEEYIKLYNRLYGIEYAILRYSNV 170
Query: 301 YG----PWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGATGSG 356
YG P G + F K +L+ ++ ++ D RDF Y+ DV K + A
Sbjct: 171 YGERQDPKGEAGVISIFIDK-MLKNQSPIIFG---DGNQTRDFVYVGDVAKANLMALN-- 224
Query: 357 GKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDVPYTHANVSLA 416
+ + N+G V L I+++ + + + + PR G+V + ++ A
Sbjct: 225 ------WKNEIVNIGTGKETSVNELFDIIKHEIGFRGEA-IYDKPREGEVYRIYLDIKKA 277
Query: 417 YKDFGYKPTTDLAAGLRKFVKW 438
+ G+KP DL G+++ V W
Sbjct: 278 -ESLGWKPEIDLKEGIKRVVNW 298
>sp|Q6MWV3|GALE_MYCTU UDP-glucose 4-epimerase OS=Mycobacterium tuberculosis GN=galE1 PE=3
SV=1
Length = 314
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 144/324 (44%), Gaps = 19/324 (5%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M LVTGAAGF+GS L G V+GLDNF + +L + L VE D
Sbjct: 1 MRALVTGAAGFIGSTLVDRLLADGHSVVGLDNFATGRATNL----EHLADNSAHVFVEAD 56
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ A L L P V HLAAQ VR ++ +PQ A N+ G V L E + +
Sbjct: 57 IVTADLHAILEQHRPEV-VFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQTGVRK 115
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFF 298
+ +S S+YG + P E+ TD PAS YAA K AGE +T+ H+YGL + +
Sbjct: 116 IVHTSSGGSIYGTPPEYPTPETAPTD-PASPYAAGKVAGEIYLNTFRHLYGLDCSHIAPA 174
Query: 299 TVYGPWGRPD---MAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGATGS 355
VYGP P F + +L GK V+ D D V +
Sbjct: 175 NVYGPRQDPHGEAGVVAIFAQALLSGKPTRVFG--DGTNTRDYVFVDDVVDAFVRVSADV 232
Query: 356 GGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDVPYTHANVSL 415
GG R +N+G +L S + + PR GD+ + ++ L
Sbjct: 233 GGGLR-------FNIGTGKETSDRQLHSAVAAAVGGPDDPE-FHPPRLGDLKRSCLDIGL 284
Query: 416 AYKDFGYKPTTDLAAGLRKFVKWY 439
A + G++P +LA G+R+ V+++
Sbjct: 285 AERVLGWRPQIELADGVRRTVEYF 308
>sp|Q5R8D0|GALE_PONAB UDP-glucose 4-epimerase OS=Pongo abelii GN=GALE PE=2 SV=1
Length = 348
Score = 108 bits (270), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 161/346 (46%), Gaps = 42/346 (12%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYD------PSLKRARQKLLQKHQVFI 174
VLVTG AG++GSH L L + G + +DNF++ + SL+R ++ L V
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQE--LTGRSVEF 62
Query: 175 VEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSV 234
E D+ D L +LF F V+H A V ++Q P Y N+ G + LLE+ K+
Sbjct: 63 EEMDILDQGALQRLFKKHSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKA- 121
Query: 235 NPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAH-------TYNHI 287
+ ++V++SS++VYG +P E+H T + Y +K EE+ T+N +
Sbjct: 122 HGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAV 181
Query: 288 YGLALTGLRFFTVYG----------PWGRPDMAYFFFTK-DILQGKTIDV----YKTQDD 332
LR+F G P G P+ + ++ I + + ++V Y T+D
Sbjct: 182 L------LRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDG 235
Query: 333 REVARDFTYIDDVVKGCVGATGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTK 392
V RD+ ++ D+ KG + A K + R+YNLG + V ++V +E K
Sbjct: 236 TGV-RDYIHVVDLAKGHIAAL---RKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKK 291
Query: 393 AKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 438
V+ R GDV +AN SLA+++ G+ L +W
Sbjct: 292 IPYKVVAR-REGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRW 336
>sp|Q14376|GALE_HUMAN UDP-glucose 4-epimerase OS=Homo sapiens GN=GALE PE=1 SV=2
Length = 348
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 160/346 (46%), Gaps = 42/346 (12%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYD------PSLKRARQKLLQKHQVFI 174
VLVTG AG++GSH L L + G + +DNF++ + SL+R ++ L V
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQE--LTGRSVEF 62
Query: 175 VEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSV 234
E D+ D L +LF F V+H A V ++Q P Y N+ G + LLE+ K+
Sbjct: 63 EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKA- 121
Query: 235 NPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAH-------TYNHI 287
+ ++V++SS++VYG +P E+H T + Y +K EE+ T+N +
Sbjct: 122 HGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAV 181
Query: 288 YGLALTGLRFFTVYG----------PWGRPDMAYFFFTK-DILQGKTIDV----YKTQDD 332
LR+F G P G P+ + ++ I + + ++V Y T+D
Sbjct: 182 L------LRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDG 235
Query: 333 REVARDFTYIDDVVKGCVGATGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTK 392
V RD+ ++ D+ KG + A K + R+YNLG + V ++V +E K
Sbjct: 236 TGV-RDYIHVVDLAKGHIAAL---RKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKK 291
Query: 393 AKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 438
V+ R GDV +AN SLA ++ G+ L +W
Sbjct: 292 IPYKVVAR-REGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRW 336
>sp|Q8R059|GALE_MOUSE UDP-glucose 4-epimerase OS=Mus musculus GN=Gale PE=2 SV=1
Length = 347
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 154/346 (44%), Gaps = 42/346 (12%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYD------PSLKRARQKLLQKHQVFI 174
VLVTG AG++GSH L L + G + +DNF++ SL+R ++ L V
Sbjct: 4 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGEDSMPESLRRVQE--LTGRSVEF 61
Query: 175 VEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSV 234
E D+ D L LF F V+H A V ++Q P Y N+ G + LLE+ ++
Sbjct: 62 EEMDILDQAALQHLFKKHSFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRA- 120
Query: 235 NPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAH-------TYNHI 287
+ ++V++SS++VYG +P E+H T + Y +K EE+ +N +
Sbjct: 121 HGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCRADTAWNAV 180
Query: 288 YGLALTGLRFFTVYG----------PWGRPDMAYFFFTKDILQGKTI-----DVYKTQDD 332
LR+F G P G P+ + ++ + + D Y T+D
Sbjct: 181 L------LRYFNPIGAHASGRIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDG 234
Query: 333 REVARDFTYIDDVVKGCVGATGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTK 392
V RD+ ++ D+ KG + A K + R YNLG + V ++V +E K
Sbjct: 235 TGV-RDYIHVVDLAKGHIAAL---KKLKEQCGCRTYNLGTGTGYSVLQMVQAMEKASGKK 290
Query: 393 AKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 438
V+ R GDV +AN SLA+++ G+ L +W
Sbjct: 291 IPYKVVAR-REGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRW 335
>sp|P35673|GALE_ERWAM UDP-glucose 4-epimerase OS=Erwinia amylovora GN=galE PE=3 SV=1
Length = 337
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 150/336 (44%), Gaps = 24/336 (7%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M++LVTG AG++GSH L+L +RGD V+ LDN ++ S+ R +KL K F EGD
Sbjct: 1 MSILVTGGAGYIGSHTVLSLLQRGDDVVILDNLSNASRESINRV-EKLTGKTATFF-EGD 58
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
L D L +F + V+H A V + + P Y +N+ G + LLE +S
Sbjct: 59 LLDRSCLRSVFSAHRISAVIHFAGLKAVGASTRKPLEYYQNNVTGTLVLLEEMRSAGVN- 117
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIY-GLALTGLRF 297
+++SS++VYG + VP+ E+ S Y +K E+I Y LR+
Sbjct: 118 QFIFSSSATVYGADAPVPYVETTPIGGTTSPYGTSKLMVEQILRDYAKANPEFKTIALRY 177
Query: 298 FTVYG----------PWGRPDMAYFFFTKDILQ-----GKTIDVYKTQDDREVARDFTYI 342
F G P G P+ + + + G D Y T+D V RD+ ++
Sbjct: 178 FNPVGAHESGQMGEDPNGIPNNLLPYIAQVAIGRLEKLGIFGDDYPTEDGTGV-RDYIHV 236
Query: 343 DDVVKGCVGATGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPR 402
D+ +G + A G + YNLG V +V E + + I R
Sbjct: 237 MDLAEGHLKALDHLSAIEG---YKAYNLGAGKGYSVLEMVKAFEK-ASGGTVAYQISPRR 292
Query: 403 NGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 438
+GD+ A+ +LA K+ ++ + + +R W
Sbjct: 293 DGDLAAFWADATLADKELNWRVSRGIDEMMRDTWNW 328
>sp|P24325|GALE_HAEIN UDP-glucose 4-epimerase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=galE PE=3 SV=2
Length = 338
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 155/338 (45%), Gaps = 28/338 (8%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M +LVTG AG++GSH + L G V+ LDN + SL+R +Q ++ + + EGD
Sbjct: 1 MAILVTGGAGYIGSHTVVELLNVGKEVVVLDNLCNSSPKSLERVKQITGKEAKFY--EGD 58
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ D LL K+F V+H A V ++Q P Y +N+AG + L++ K
Sbjct: 59 ILDRALLQKIFAENEINSVIHFAGLKAVGESVQKPTEYYMNNVAGTLVLIQEMKKAGVW- 117
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAH-TYNHIYGLALTGLRF 297
+ V++SS++VYG +P +E + Y +K E+I T ++T LR+
Sbjct: 118 NFVFSSSATVYGDPKIIPITEDCEVGGTTNPYGTSKYMVEQILRDTAKAEPKFSMTILRY 177
Query: 298 FTVYG----------PWGRPDMAYFFFTKDILQGKTIDV------YKTQDDREVARDFTY 341
F G P G P+ + ++ + GK + Y T D V RD+ +
Sbjct: 178 FNPVGAHESGLIGEDPNGIPNNLLPYISQ-VAIGKLAQLSVFGSDYDTHDGTGV-RDYIH 235
Query: 342 IDDVVKGCVGATGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLN-TKAKKHVIRM 400
+ D+ G + A + A L +YNLG V +V E N T A K V R
Sbjct: 236 VVDLAVGHLKAL---QRHENDAGLHIYNLGTGHGYSVLDMVKAFEKANNITIAYKLVER- 291
Query: 401 PRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 438
R+GD+ +++ SLA K+ G+ L ++ W
Sbjct: 292 -RSGDIATCYSDPSLAAKELGWVAERGLEKMMQDTWNW 328
>sp|O06485|YFNG_BACSU Putative sugar dehydratase/epimerase YfnG OS=Bacillus subtilis
(strain 168) GN=yfnG PE=3 SV=2
Length = 322
Score = 102 bits (253), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 142/332 (42%), Gaps = 29/332 (8%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGL--DNF---NSYYDPSLKRARQKLLQKHQVFIV 175
V VTG G +GS+ L ++G V GL D+ N Y +K+ IV
Sbjct: 9 VFVTGCTGLLGSYLVKELIEQGANVTGLVRDHVPQSNLYQGEHIKKMN----------IV 58
Query: 176 EGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVN 235
G L D ++ + V HLAAQA V A +NP S +NI G N+LE C+
Sbjct: 59 RGSLEDLAVIERALGEYEIDTVFHLAAQAIVGVANRNPISTFEANILGTWNILEACRKHP 118
Query: 236 PQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGL 295
++ ASS YG +P+ E+ Q Y +K + I+HTY H YGL +
Sbjct: 119 LIKRVIVASSDKAYGDQENLPYDENMPL-QGKHPYDVSKSCADLISHTYFHTYGLPVCIT 177
Query: 296 RFFTVYGPWGRPDMAYFFFTKD----ILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVG 351
R +YG D+ + +L G+ ++ + D RD+ YI+D V+ +
Sbjct: 178 RCGNLYGG---GDLNFNRIIPQTIQLVLNGEAPEI---RSDGTFVRDYFYIEDAVQAYLL 231
Query: 352 ATGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDVPYTHA 411
+ + +N N + V LV + +N+ K V+ N ++ + +
Sbjct: 232 LAEKMEENNLAGE--AFNFSNEIQLTVLELVEKILKKMNSNLKPKVLNQGSN-EIKHQYL 288
Query: 412 NVSLAYKDFGYKPTTDLAAGLRKFVKWYVSYY 443
+ A K + P + GL K ++WY ++
Sbjct: 289 SAEKARKLLNWTPAYTIDEGLEKTIEWYTEFF 320
>sp|Q9T0A7|GALE3_ARATH UDP-glucose 4-epimerase 3 OS=Arabidopsis thaliana GN=At4g23920 PE=2
SV=1
Length = 350
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 158/349 (45%), Gaps = 49/349 (14%)
Query: 120 TVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQ------KLLQKHQVF 173
+VLVTG AG++GSH L L + G + +DN+++ SL+R ++ L HQV
Sbjct: 4 SVLVTGGAGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFHQV- 62
Query: 174 IVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKS 233
DL D P L K+F F V+H A V +++ P Y +NI G V LLEV
Sbjct: 63 ----DLRDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQ 118
Query: 234 VNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASL---YAATKKAGEEIA---HTYNHI 287
+ ++V++SS++VYG +VP +E + P S Y TK EEI H +
Sbjct: 119 YGCK-NLVFSSSATVYGWPKEVPCTE----ESPISATNPYGRTKLFIEEICRDVHRSDSE 173
Query: 288 YGLALTGLRFFTVYG----------PWGRPDMAYFFFTKDILQGKTIDV------YKTQD 331
+ + L LR+F G P G P+ + + + G+ + YKT+D
Sbjct: 174 WKIIL--LRYFNPVGAHPSGYIGEDPLGVPN-NLMPYVQQVAVGRRPHLTVFGTDYKTKD 230
Query: 332 DREVARDFTYIDDVVKGCVGATGSGGKKRGPAQL--RVYNLGNTSPVPVGRLVSILENLL 389
V RD+ ++ D+ G + A +K ++ VYNLG + V +V+ E
Sbjct: 231 GTGV-RDYIHVMDLADGHIAAL----RKLDDLKISCEVYNLGTGNGTSVLEMVAAFEK-A 284
Query: 390 NTKAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 438
+ K V+ R GD +A+ A ++ +K + R W
Sbjct: 285 SGKKIPLVMAGRRPGDAEVVYASTEKAERELNWKAKNGIEEMCRDLWNW 333
>sp|Q9CNY5|GALE_PASMU UDP-glucose 4-epimerase OS=Pasteurella multocida (strain Pm70)
GN=galE PE=3 SV=1
Length = 338
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 152/338 (44%), Gaps = 28/338 (8%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M +LVTG AG++GSH + L V+ LDN + SL+R Q + QV +GD
Sbjct: 1 MAILVTGGAGYIGSHTVVELLNANKDVVVLDNLCNSSPKSLERVAQ--ITGKQVKFYQGD 58
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ D LL K+F V+H A V ++Q P Y +N+ G + L++ K
Sbjct: 59 ILDTALLQKIFAENQIQSVIHFAGLKAVGESVQKPAEYYMNNVTGSLVLIQEMKKAGVW- 117
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIY-GLALTGLRF 297
+ V++SS++VYG +P +ES + + Y +K E+I ++T LR+
Sbjct: 118 NFVFSSSATVYGDPEIIPITESCKVGGTTNPYGTSKFMVEQILKDIAKATPEFSITILRY 177
Query: 298 FTVYG----------PWGRPDMAYFFFTKDILQGKTIDV------YKTQDDREVARDFTY 341
F G P G P+ + ++ + GK + Y+T D V RD+ +
Sbjct: 178 FNPVGAHESGLIGEDPNGIPNNLLPYISQ-VAIGKLPQLSVFGSDYETHDGTGV-RDYIH 235
Query: 342 IDDVVKGCVGATGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAK-KHVIRM 400
+ D+ G + A + G A L +YNLG S V +V E + + K K V R
Sbjct: 236 VVDLAIGHLKAL---DRHEGDAGLHIYNLGTGSGYSVLDMVKAFEKVNDIKIPYKLVDRR 292
Query: 401 PRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 438
P GD+ +++ SLA + + L ++ W
Sbjct: 293 P--GDIATCYSDPSLAKTELNWTAARGLEQMMKDTWHW 328
>sp|Q57301|GALE_YEREN UDP-glucose 4-epimerase OS=Yersinia enterocolitica GN=galE PE=3
SV=1
Length = 336
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 150/337 (44%), Gaps = 28/337 (8%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M++L+TG AG++GSH L L ++G V+ LDN + SL R + +K + GD
Sbjct: 1 MSILITGGAGYIGSHTVLTLLEQGRNVVVLDNLINSSAESLARVSKICGRKPNFY--HGD 58
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ D L +F V+H A V +++ P Y +N+ G + LLE N +
Sbjct: 59 ILDRSCLKLIFSSHKIDSVIHFAGLKSVGESVEKPIEYYQNNVVGSITLLEEMCLANVK- 117
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIY-GLALTGLRF 297
++++SS++VYG VP +E R + Y +K E+I ++ + ++T LR+
Sbjct: 118 KLIFSSSATVYGEPEFVPLTEKARIGGTTNPYGTSKVMVEQILKDFSLAHPDYSITALRY 177
Query: 298 FTVYG----------PWGRPDMAYFFFTKDILQGKTIDV------YKTQDDREVARDFTY 341
F G P G+P+ F T+ + GK + Y T D + RD+ +
Sbjct: 178 FNPVGAHPSGLIGEDPNGKPNNLLPFITQ-VAIGKLSKLLVYGNDYDTPDGSGI-RDYIH 235
Query: 342 IDDVVKGCVGATGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMP 401
+ D+ +G + + R+YNLG V ++ E + ++
Sbjct: 236 VMDLAEGHLSTL-----INLTSGFRIYNLGTGVGYSVLHMIKEFERITGKNIPFDIVSR- 289
Query: 402 RNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 438
R GD+ A+ LA+ + G+ L L+ KW
Sbjct: 290 RPGDIAECWASPELAHLELGWYAKRTLVDMLQDAWKW 326
>sp|A0R5C5|GALE_MYCS2 UDP-glucose 4-epimerase OS=Mycobacterium smegmatis (strain ATCC
700084 / mc(2)155) GN=MSMEG_6142 PE=1 SV=2
Length = 313
Score = 98.6 bits (244), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 140/324 (43%), Gaps = 19/324 (5%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M LVTGAAGF+GS L G GV+GLD+ +S +L A + V+ D
Sbjct: 1 MRTLVTGAAGFIGSTLVDRLLADGHGVVGLDDLSSGRAENLHSAENS----DKFEFVKAD 56
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ DA L L + P + HLAAQ V+ ++ +P N+ G V L E + +
Sbjct: 57 IVDADLTGLLAEFKPEV-IFHLAAQISVKRSVDDPPFDATVNVVGTVRLAEAARLAGVRK 115
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFF 298
+ +S SVYG P SE + PAS YAA K AGE + Y ++Y L + +
Sbjct: 116 VVHTSSGGSVYGTPPAYPTSEDMPVN-PASPYAAGKVAGEVYLNMYRNLYDLDCSHIAPA 174
Query: 299 TVYGPWGRPD---MAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGATGS 355
VYGP P F++ +L G+T ++ D + D G G
Sbjct: 175 NVYGPRQDPHGEAGVVAIFSEALLAGRTTKIFGDGSDTRDYVFVDDVVDAFVRAGGPAGG 234
Query: 356 GGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDVPYTHANVSL 415
G + +N+G L + + + + PR GD+ + + +
Sbjct: 235 GQR---------FNVGTGVETSTRELHTAIAGAVGAPDEPE-FHPPRLGDLRRSRLDNTR 284
Query: 416 AYKDFGYKPTTDLAAGLRKFVKWY 439
A + G++P LA G+ K V+++
Sbjct: 285 AREVLGWQPQVALAEGIAKTVEFF 308
>sp|P09147|GALE_ECOLI UDP-glucose 4-epimerase OS=Escherichia coli (strain K12) GN=galE
PE=1 SV=1
Length = 338
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 157/343 (45%), Gaps = 38/343 (11%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNF-NSYYDPSLKRARQKLLQKHQVFIVEG 177
M VLVTG +G++GSH + L + G V+ LDN NS S+ ++L KH F VEG
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKR--SVLPVIERLGGKHPTF-VEG 57
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
D+ + L+T++ V+H A V ++Q P Y +N+ G + L+ ++ N +
Sbjct: 58 DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHI---YGLALTG 294
+ +++SS++VYG ++P+ ES T P S Y +K E+I + +AL
Sbjct: 118 -NFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIAL-- 174
Query: 295 LRFFTVYG----------PWGRPDMAYFFFTKDILQGKTIDV------YKTQDDREVARD 338
LR+F G P G P+ + + + G+ + Y T+D V RD
Sbjct: 175 LRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQ-VAVGRRDSLAIFGNDYPTEDGTGV-RD 232
Query: 339 FTYIDDVVKGCVGATGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHV- 397
+ ++ D+ G V A K G + +YNLG VG V + N + K V
Sbjct: 233 YIHVMDLADGHVVAMEKLANKPG---VHIYNLG----AGVGNSVLDVVNAFSKACGKPVN 285
Query: 398 --IRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 438
R GD+P A+ S A ++ ++ T L + W
Sbjct: 286 YHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHW 328
>sp|P09609|GAL10_KLULA Bifunctional protein GAL10 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=GAL10 PE=2 SV=2
Length = 688
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 153/341 (44%), Gaps = 34/341 (9%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNF-NSYYDPSLKRARQKLLQKHQVFIVEGDL 179
LVTG AG++GSH + L + G + +DN NS Y+ AR +LL ++ + DL
Sbjct: 7 CLVTGGAGYIGSHTVVELCEAGYKCIVVDNLSNSSYESV---ARMELLTGQEIKFAKIDL 63
Query: 180 NDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPS 239
+ L KLFD VLH A V + Q P +Y +NI G +NLLE KS + +
Sbjct: 64 CELEPLNKLFDDYKIDSVLHFAGLKAVGESTQIPLTYYFNNIVGTINLLECMKSHDVK-K 122
Query: 240 IVWASSSSVYGLNTQ----VPFSESHRTDQPASLYAATKKAGEEIA---HTYNHIYGLAL 292
+V++SS++VYG T+ +P E+ T P + Y TK E++ H + + A+
Sbjct: 123 LVFSSSATVYGDATRFENMIPIPETCPT-GPTNPYGKTKLTIEDMMRDLHFSDKSFSFAI 181
Query: 293 TGLRFFTVYG----------PWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVA-----R 337
LR+F G P G P+ F + + G+ +Y DD + R
Sbjct: 182 --LRYFNPIGAHPSGVIGEDPLGIPNNLLPFMAQ-VAIGRRPKLYVFGDDYDSVDGTPIR 238
Query: 338 DFTYIDDVVKGCVGATGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHV 397
D+ ++ D+ KG + A K G R +NLG V ++ + + ++V
Sbjct: 239 DYIHVVDLAKGHLAALKYLEKYAGTC--REWNLGTGHGTTVLQMYRAFCDAIGFNF-EYV 295
Query: 398 IRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 438
+ R+GDV A A + +K D+ KW
Sbjct: 296 VTARRDGDVLNLTAKCDRATNELEWKTELDVNKACVDLWKW 336
>sp|Q43070|GALE1_PEA UDP-glucose 4-epimerase OS=Pisum sativum GN=GALE PE=2 SV=1
Length = 350
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 160/345 (46%), Gaps = 41/345 (11%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKL---LQKHQVFIVEG 177
+LVTG+AGF+G+H + L G V +DNF++ +++R R+ + L ++ F + G
Sbjct: 8 ILVTGSAGFIGTHTVVQLLNNGFNVSIIDNFDNSVMEAVERVREVVGSNLSQNLEFTL-G 66
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
DL + L KLF F V+H A V +++NP+ Y +N+ G +NL EV N +
Sbjct: 67 DLRNKDDLEKLFSKSKFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYEVMAKHNCK 126
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIY-GLALTGLR 296
+V++SS++VYG ++P E + Q + Y TK EEIA + LR
Sbjct: 127 -KMVFSSSATVYGQPEKIPCVEDFKL-QAMNPYGRTKLFLEEIARDIQKAEPEWRIVLLR 184
Query: 297 FFTVYG----------PWGRPD--MAYFFFTKDILQGKTIDV------YKTQDDREVARD 338
+F G P G P+ M Y + + G+ ++ Y T+D + RD
Sbjct: 185 YFNPVGAHESGKLGEDPRGIPNNLMPYI---QQVAVGRLPELNVYGHDYPTRDGSAI-RD 240
Query: 339 FTYIDDVVKGCVGATGSGGKKRGPAQ---LRVYNLGNTSPVPVGRLVSILENLLNTKAKK 395
+ ++ D+ G + A +K ++ YNLG V +V+ E KK
Sbjct: 241 YIHVMDLADGHIAAL----RKLFTSENIGCTAYNLGTGRGSSVLEMVAAFE---KASGKK 293
Query: 396 HVIRM-PRN-GDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 438
+++ PR GD +A+ + A K+ G+K + R W
Sbjct: 294 IALKLCPRRPGDATEVYASTAKAEKELGWKAKYGVEEMCRDQWNW 338
>sp|P22715|GALE_SALTY UDP-glucose 4-epimerase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=galE PE=3 SV=2
Length = 338
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 157/339 (46%), Gaps = 30/339 (8%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNF-NSYYDPSLKRARQKLLQKHQVFIVEG 177
M VLVTG +G++GSH + L + G V+ LDN NS S+ ++L KH F VEG
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKR--SVLPVIERLGGKHPTF-VEG 57
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
D+ + L+T++ V+H A V ++ P Y +N+ G + L+ ++ N +
Sbjct: 58 DIRNEALITEILHDHAIDTVIHFAGLKAVGESVARPLEYYDNNVNGTLRLVSAMRAANVK 117
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHI---YGLALTG 294
+++++SS++VYG ++P+ ES T P S Y +K E+I + +AL
Sbjct: 118 -NLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPEWSIAL-- 174
Query: 295 LRFFTVYG----------PWGRP-DMAYFFFTKDILQGKTIDV----YKTQDDREVARDF 339
LR+F G P G P ++ + + + +++ V Y T+D V RD+
Sbjct: 175 LRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRESLAVFGNDYPTEDGTGV-RDY 233
Query: 340 TYIDDVVKGCVGATGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIR 399
++ D+ G V A K G + +YNLG V +V+ H
Sbjct: 234 IHVMDLADGHVVAMEKLADKSG---VHIYNLGAGVGSSVLDVVNAFSKACGKPINYHFAP 290
Query: 400 MPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 438
R+GD+P A+ S A ++ ++ T L + W
Sbjct: 291 R-RDGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHW 328
>sp|Q56093|GALE_SALTI UDP-glucose 4-epimerase OS=Salmonella typhi GN=galE PE=3 SV=2
Length = 338
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 157/339 (46%), Gaps = 30/339 (8%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNF-NSYYDPSLKRARQKLLQKHQVFIVEG 177
M VLVTG +G++GSH + L + G V+ LDN NS S+ ++L KH F VEG
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKR--SVLPVIERLGGKHPTF-VEG 57
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
D+ + L+T++ V+H A V ++ P Y +N+ G + L+ ++ N +
Sbjct: 58 DIRNEALITEILHDHAIDTVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLVSAMRAANVK 117
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHI---YGLALTG 294
+++++SS++VYG ++P+ ES T P S Y +K E+I + +AL
Sbjct: 118 -NLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPEWSIAL-- 174
Query: 295 LRFFTVYG----------PWGRP-DMAYFFFTKDILQGKTIDV----YKTQDDREVARDF 339
LR+F G P G P ++ + + + +++ V Y T+D V RD+
Sbjct: 175 LRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRESLAVFGNDYPTEDGTGV-RDY 233
Query: 340 TYIDDVVKGCVGATGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIR 399
++ D+ G V A K G + +YNLG V +V+ H
Sbjct: 234 IHVMDLADGHVVAMEKLADKSG---VHIYNLGAGVGSSVLDVVNAFSKACGKPINYHFAP 290
Query: 400 MPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 438
R+GD+P A+ S A ++ ++ T L + W
Sbjct: 291 R-RDGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHW 328
>sp|P18645|GALE_RAT UDP-glucose 4-epimerase OS=Rattus norvegicus GN=Gale PE=2 SV=1
Length = 347
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 156/350 (44%), Gaps = 51/350 (14%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYD------PSLKRARQKLLQKHQVFI 174
VLVTG AG++GSH L L + G + +DNF++ SL+R ++ L V
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNSIRGEDSMPESLRRVQE--LTGRSVEF 62
Query: 175 VEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSV 234
E D+ D L LF F V+H A V ++Q P Y N+ G + LLE+ +++
Sbjct: 63 EEMDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAM 122
Query: 235 NPQPSIVWASSSSVYGLNTQVPFSES---HR-TDQPASLYAATKKAGEEIAH-------T 283
+ S+V++SS++VYG VP S HR +P Y +K EE+
Sbjct: 123 GVK-SLVFSSSATVYG--KPVPASGRGPPHRGCTKP---YGKSKFFIEEMIQDLCRADTA 176
Query: 284 YNHIYGLALTGLRFFTVYG----------PWGRPDMAYFFFTKDILQGKTI-----DVYK 328
+N + LR+F G P G P+ + ++ + + D Y
Sbjct: 177 WNAVL------LRYFIPIGAHRSARIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYA 230
Query: 329 TQDDREVARDFTYIDDVVKGCVGATGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENL 388
T+D V RD+ ++ D+ KG + A K + R+YNLG + V ++V +E
Sbjct: 231 TEDGTGV-RDYIHVVDLAKGHIAAL---KKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKA 286
Query: 389 LNTKAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 438
K V+ R GDV +AN SLA+++ G+ L +W
Sbjct: 287 SGKKIPYKVVAR-REGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRW 335
>sp|Q9HDU3|GAL10_SCHPO Bifunctional protein gal10 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=gal10 PE=3 SV=1
Length = 713
Score = 95.9 bits (237), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 156/362 (43%), Gaps = 34/362 (9%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNF-NSYYDPSLKRARQKLLQKHQVFIVEGDL 179
+LVTG AG++GSH + L G V+ +DN NS YD AR + + + + + DL
Sbjct: 8 ILVTGGAGYIGSHTVIELINHGYKVIIVDNLCNSCYDAV---ARVEFIVRKSIKFFKLDL 64
Query: 180 NDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPS 239
D L ++FD V+H AA V +M+ P Y +NI G + LL V + + +
Sbjct: 65 RDKEGLAQIFDTFKIKGVIHFAALKAVGESMKLPLEYYDNNICGTITLLNVMRE-HRVKT 123
Query: 240 IVWASSSSVYG----LNTQVPFSESHRTDQPASLYAATKKAGEEIA---HTYNHIYGLAL 292
+V++SS++VYG + +P ES D P + Y TK A E I HT ++ + A+
Sbjct: 124 VVFSSSATVYGDATRFDNMIPIPESCPND-PTNPYGKTKYAIENIIKDLHTSDNTWRGAI 182
Query: 293 TGLRFFTVYG----------PWGRPDMAYFFFTKDILQGKTI-----DVYKTQDDREVAR 337
LR+F G P G P+ F + + + D Y + D + R
Sbjct: 183 --LRYFNPIGAHPSGLLGEDPLGIPNNLLPFLAQVAIGRREKLLVFGDDYDSHDGTPI-R 239
Query: 338 DFTYIDDVVKGCVGATGSGGK-KRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKH 396
D+ ++ D+ KG + A K R +NLG V + +
Sbjct: 240 DYIHVVDLAKGHIAALNYLNKINNSEGMYREWNLGTGKGSSVFDIYHAFCKEVGKDLPYE 299
Query: 397 VIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSY-YGIQPRVKKENGF 455
V+ R GDV A+ + A + +K + R KW + +G Q K F
Sbjct: 300 VVGR-RTGDVLNLTASPNRANSELKWKAELSITDACRDLWKWTIENPFGFQIDNYKWKLF 358
Query: 456 ST 457
+T
Sbjct: 359 NT 360
>sp|Q42605|GALE1_ARATH UDP-glucose 4-epimerase 1 OS=Arabidopsis thaliana GN=At1g12780 PE=1
SV=2
Length = 351
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 154/344 (44%), Gaps = 39/344 (11%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKL---LQKHQVFIVEG 177
+LVTG AGF+G+H + L K G V +DNF++ ++ R R+ + L K F + G
Sbjct: 9 ILVTGGAGFIGTHTVVQLLKDGFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDFNL-G 67
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
DL + + KLF F V+H A V +++NP+ Y +N+ G +NL E N +
Sbjct: 68 DLRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYETMAKYNCK 127
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIY-GLALTGLR 296
+V++SS++VYG ++P E + + Y TK EEIA + LR
Sbjct: 128 -MMVFSSSATVYGQPEKIPCMEDFEL-KAMNPYGRTKLFLEEIARDIQKAEPEWRIILLR 185
Query: 297 FFTVYG----------PWGRPD--MAYFFFTKDILQGKTIDV------YKTQDDREVARD 338
+F G P G P+ M Y + + G+ ++ Y T+D V RD
Sbjct: 186 YFNPVGAHESGSIGEDPKGIPNNLMPYI---QQVAVGRLPELNVYGHDYPTEDGSAV-RD 241
Query: 339 FTYIDDVVKGCVGATGS--GGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKH 396
+ ++ D+ G + A K G YNLG V +V+ E KK
Sbjct: 242 YIHVMDLADGHIAALRKLFADPKIG---CTAYNLGTGQGTSVLEMVAAFE---KASGKKI 295
Query: 397 VIRMP--RNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 438
I++ R+GD +A+ A K+ G+K + R KW
Sbjct: 296 PIKLCPRRSGDATAVYASTEKAEKELGWKAKYGVDEMCRDQWKW 339
>sp|Q9KDV3|GALE_BACHD UDP-glucose 4-epimerase OS=Bacillus halodurans (strain ATCC BAA-125
/ DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=galE PE=3
SV=1
Length = 334
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 138/320 (43%), Gaps = 31/320 (9%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M +LVTG AG++GSH L L ++G+ V+ LDN + +L V GD
Sbjct: 1 MAILVTGGAGYIGSHTVLFLLEQGEQVIVLDNLQKGHAGALS----------DVTFYHGD 50
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ D LL +F V+H AA + V +++ P Y +N+ G LL+ + +
Sbjct: 51 IRDDQLLDTIFTTHSIDTVIHFAANSLVGESVKQPIEYYENNVIGTHTLLKKMLEHDVK- 109
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFF 298
IV++S+++ YG Q+P ES T P + Y TK A E++ H YGL LR+F
Sbjct: 110 KIVFSSTAATYGEPVQIPIQESDPT-IPTNPYGETKLAIEKMFHWCQEAYGLQYVCLRYF 168
Query: 299 TVYG--PWGR------PDMAYFFFTKDILQGKTI------DVYKTQDDREVARDFTYIDD 344
G P GR P+ + G+ D Y+T+D + RD+ ++ D
Sbjct: 169 NAAGADPNGRIGEDHSPESHLIPIVLQVALGQRERVAIFGDDYQTEDGSCI-RDYIHVMD 227
Query: 345 VVKGCVGATGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNG 404
+ A R Q +NLGN V ++ + + I R+G
Sbjct: 228 LANAHYLAC---EHLRKDGQSGSFNLGNGKGFSVKEVIEVCRQVTGHPIPAE-IAPRRSG 283
Query: 405 DVPYTHANVSLAYKDFGYKP 424
D A+ A G++P
Sbjct: 284 DPASLIASSEKAQTILGWEP 303
>sp|Q05026|GALE_NEIGO UDP-glucose 4-epimerase OS=Neisseria gonorrhoeae GN=galE PE=3 SV=1
Length = 338
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 157/344 (45%), Gaps = 40/344 (11%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
MTVL+TG GF+GSH +++L + G + LDN + L R RQ + + +GD
Sbjct: 1 MTVLITGGTGFIGSHTAVSLVQSGYDAVILDNLCNSSAAVLPRLRQ--ITGRNIPFYQGD 58
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ D +L ++F V+H A V ++ P Y +N+ G + L E
Sbjct: 59 IRDCQILRQIFSEHEIESVIHFAGLKAVGESVAEPTKYYGNNVYGSLVLAEEMARAGVL- 117
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEI---AHTYNHIYGLALTGL 295
IV++SS++VYG +VP++E R A+ Y A+K E + + + + L L
Sbjct: 118 KIVFSSSATVYGDAEKVPYTEDMRPGDTANPYGASKAMVERMLTDIQKADPRWSVIL--L 175
Query: 296 RFFTVYG----------PWGRPDMAYFFFTKDILQGKTIDV------YKTQDDREVARDF 339
R+F G P G P+ + + + G+ + Y T D + RD+
Sbjct: 176 RYFNPIGAHESGLIGEQPNGVPNNLLPYICQ-VASGRLPQLSVFGGDYPTPDGTGM-RDY 233
Query: 340 TYIDDVVKGCVGATGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKK--HV 397
++ D+ +G + A + G G A + ++NLG+ GR S+LE + +A H+
Sbjct: 234 IHVMDLAEGHIAAMKAKG---GVAGVHLFNLGS------GRAYSVLEIIRAFEAASGLHI 284
Query: 398 ---IRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 438
I+ R GD+ ++A+ S + G++ L + +W
Sbjct: 285 PYRIQPRRAGDLACSYADPSHTKQQTGWETKRGLQQMMEDSWRW 328
>sp|Q9F7D4|GALE_YERPE UDP-glucose 4-epimerase OS=Yersinia pestis GN=galE PE=3 SV=1
Length = 338
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 150/330 (45%), Gaps = 32/330 (9%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M VLVTG +G++GSH + L + G + LDN + L AR L + + GD
Sbjct: 1 MYVLVTGGSGYIGSHTCVQLIEAGYKPVILDNLCNSKSSVL--ARIHSLTGYTPELYAGD 58
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ D LL +F P V+H A V ++ P Y +N+ G + LLE ++ +
Sbjct: 59 IRDRTLLDSIFAAHPIHAVIHFAGLKAVGESVNRPLEYYNNNVFGTLVLLEAMRAAQVK- 117
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLA-----LT 293
+++++SS++VYG Q+P+ ES T P+S Y +K E+I LA +T
Sbjct: 118 NLIFSSSATVYGDQPQIPYVESFPTGSPSSPYGRSKLMVEQILQDVQ----LADPQWNMT 173
Query: 294 GLRFFTVYG----------PWGRP-DMAYFFFTKDILQGKTIDV----YKTQDDREVARD 338
LR+F G P G P ++ F + + +++ + Y T D V RD
Sbjct: 174 ILRYFNPVGAHPSGLMGEDPQGIPNNLMPFIAQVAVGRRESLAIFGNGYPTPDGTGV-RD 232
Query: 339 FTYIDDVVKGCVGATGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVI 398
+ ++ D+ G V A + K G + ++NLG V ++V+ H
Sbjct: 233 YIHVVDLADGHVAAMKTLHGKPG---VHIFNLGAGVGHSVLQVVAAFSKACGKPLAYHFA 289
Query: 399 RMPRNGDVPYTHANVSLAYKDFGYKPTTDL 428
R GD+P A+ + A + G++ + L
Sbjct: 290 PR-REGDLPAYWADATKAAEQLGWRVSRSL 318
>sp|P33119|GALE_CORDI UDP-glucose 4-epimerase OS=Corynebacterium diphtheriae (strain ATCC
700971 / NCTC 13129 / Biotype gravis) GN=galE PE=3 SV=2
Length = 328
Score = 92.0 bits (227), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 142/322 (44%), Gaps = 30/322 (9%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M +LVTG AG+VGS CS L ++G V +DN L + + F VEGD
Sbjct: 1 MKLLVTGGAGYVGSVCSTVLLEQGHEVTIVDN--------LTTGNRDAVPLGATF-VEGD 51
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ D + + F VLH AA++ V +++ P Y N+ + LL+ K N +
Sbjct: 52 IKD--VADNVLSSDSFDAVLHFAARSLVGESVEKPDEYWQHNMVTTLALLDAMKRNNVR- 108
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFF 298
+IV++S+++ YG VP +E T P + Y ATK + + +Y H YG A T LR+F
Sbjct: 109 NIVFSSTAATYGEPETVPITEDAPT-HPTNPYGATKLSIDYAITSYAHAYGFAATSLRYF 167
Query: 299 TVYGPWG------RPDMAYFFFTKDILQGKTIDVYKTQDDREVA-----RDFTYIDDVVK 347
V G +G + + G ++ DD RD+ +I D+
Sbjct: 168 NVAGAYGLVGENREIETHLIPLVLQVALGHRDKIFMFGDDWPTEDGTPIRDYIHIRDLAD 227
Query: 348 GCVGATGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDVP 407
+ A S + R++NLG+ V +++ + V R GD
Sbjct: 228 AHILALQSNVE----GSHRIFNLGSGEGYSVKQVIDTCREVTGHLIPAEVAPR-RAGDPA 282
Query: 408 YTHANVSLAYKDFGYKPT-TDL 428
A+ + A + G+KP TDL
Sbjct: 283 VLIASSAKAQSELGWKPQRTDL 304
>sp|O65780|GALE1_CYATE UDP-glucose 4-epimerase GEPI42 OS=Cyamopsis tetragonoloba PE=2 SV=1
Length = 354
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 155/354 (43%), Gaps = 41/354 (11%)
Query: 112 TPRRPNGMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDN-FNSYYDPSLKRARQKL--LQ 168
+ R +G T+LVTG AGF+GSH + L K+G V +DN +NS D ++ R R + L
Sbjct: 3 SSRMASGETILVTGGAGFIGSHTVVQLLKQGFHVSIIDNLYNSVID-AVHRVRLLVGPLL 61
Query: 169 KHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLL 228
+ GDL + L LF F V+H A GV ++ NP +Y +N+ +NL
Sbjct: 62 SSNLHFHHGDLRNIHDLDILFSKTKFDAVIHFAGLKGVGESVLNPSNYYDNNLVATINLF 121
Query: 229 EVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIY 288
+V N + +V +SS++VYG Q+P E + Y +K EE+A
Sbjct: 122 QVMSKFNCK-KLVISSSATVYGQPDQIPCVEDSNL-HAMNPYGRSKLFVEEVARDIQRAE 179
Query: 289 G-LALTGLRFFTVYG----------PWGRP-DMAYFFFTKDILQGKTIDVYK----TQDD 332
+ LR+F G P G P ++ + + + +++Y T+D
Sbjct: 180 AEWRIILLRYFNPVGAHESGQIGEDPRGLPNNLMPYIQQVAVARLPELNIYGHDYPTKDG 239
Query: 333 REVARDFTYIDDVVKGCVGA------TGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILE 386
+ RD+ ++ D+ G + A T + G YNLG V +V+ E
Sbjct: 240 TAI-RDYIHVMDLADGHIAALRKLFTTDNIG-------CTAYNLGTGRGTSVLEMVAAFE 291
Query: 387 NLLNTKAKKHVIRM-PRN-GDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 438
KK I+M PR GD +A+ A K+ G+K + R KW
Sbjct: 292 ---KASGKKIPIKMCPRRPGDATAVYASTEKAEKELGWKAKYGVEEMCRDQWKW 342
>sp|Q45291|GALE_CORGL UDP-glucose 4-epimerase OS=Corynebacterium glutamicum (strain ATCC
13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
GN=galE PE=3 SV=2
Length = 329
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNF---NSYYDPSLKRARQKLLQKHQVFIV 175
M +LVTG AG+VGS + L + G V +DNF N P+ R ++
Sbjct: 1 MKLLVTGGAGYVGSVAAAVLLEHGHDVTIIDNFSTGNREAVPADAR------------LI 48
Query: 176 EGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKS-- 233
EGD+ND ++ ++ F V+H AA++ V +++ P Y N+ + LL+ ++
Sbjct: 49 EGDVND--VVEEVLSEGGFEGVVHFAARSLVGESVEKPNEYWHDNVVTALTLLDAMRAHG 106
Query: 234 VNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALT 293
VN ++V++S+++ YG VP +E T QP + Y ATK + + +Y +GLA T
Sbjct: 107 VN---NLVFSSTAATYGEPDVVPITEDMPT-QPTNAYGATKLSIDYAITSYAAAFGLAAT 162
Query: 294 GLRFFTV---YGPWGRPDMAYFFFTKDILQGKTIDVYKT--------QDDREVARDFTYI 342
LR+F V YG G +LQ T KT D RD+ +I
Sbjct: 163 SLRYFNVAGAYGNIGENREVETHLIPLVLQVATGHREKTFMFGDDWPTPDGTAVRDYIHI 222
Query: 343 DDVVKGCVGATGS--GGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRM 400
D+ K V A S GK R++NLG+ V ++V + + V
Sbjct: 223 LDLAKAHVLALESNEAGKH------RIFNLGSGDGYSVKQVVEMCREVTGHPIPAEV--A 274
Query: 401 PRNGDVPYTH-ANVSLAYKDFGYKPT-TDL 428
PR P T A+ A ++ G+ P TDL
Sbjct: 275 PRRAGDPATLIASSEKAKQELGWTPEHTDL 304
>sp|Q9SN58|GALE2_ARATH UDP-glucose 4-epimerase 2 OS=Arabidopsis thaliana GN=At4g10960 PE=2
SV=3
Length = 351
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 152/354 (42%), Gaps = 61/354 (17%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQ------KLLQKHQVFI 174
VLV+G AG++GSH L L G V+ +DN ++ SL+R ++ + L HQV
Sbjct: 6 VLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSFHQV-- 63
Query: 175 VEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEV---- 230
DL D L K+F F V+H A V +++ P Y +N+ G + LLEV
Sbjct: 64 ---DLRDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQH 120
Query: 231 -CKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASL---YAATKKAGEEIAHTYNH 286
CK ++V++SS++VYG +VP +E P S Y TK EEI
Sbjct: 121 GCK------NLVFSSSATVYGSPKEVPCTEEF----PISALNPYGRTKLFIEEICRD--- 167
Query: 287 IYG----LALTGLRFFTVYG----------PWGRPDMAYFFFTKDILQGKTIDV------ 326
+YG + LR+F G P G P+ F + + G+ +
Sbjct: 168 VYGSDPEWKIILLRYFNPVGAHPSGDIGEDPRGIPN-NLMPFVQQVAVGRRPHLTVFGND 226
Query: 327 YKTQDDREVARDFTYIDDVVKGCVGATGSGGKKRGPAQL--RVYNLGNTSPVPVGRLVSI 384
Y T+D V RD+ ++ D+ G + A +K ++ VYNLG + V +V
Sbjct: 227 YNTKDGTGV-RDYIHVIDLADGHIAAL----RKLEDCKIGCEVYNLGTGNGTSVLEMVDA 281
Query: 385 LENLLNTKAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 438
E + K VI R GD +A+ A + +K + R W
Sbjct: 282 FEK-ASGKKIPLVIAGRRPGDAEVVYASTERAESELNWKAKYGIEEMCRDLWNW 334
>sp|Q9SA77|ARAE1_ARATH UDP-arabinose 4-epimerase 1 OS=Arabidopsis thaliana GN=MUR4 PE=1
SV=1
Length = 419
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 167/371 (45%), Gaps = 41/371 (11%)
Query: 114 RRPNGMT-VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQV 172
R G+T VLVTG AG++GSH +L L K V +DN + +++ ++ + ++
Sbjct: 65 RHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPEPGRL 124
Query: 173 FIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCK 232
+ DL DA + K+F F V+H AA A V + Q P Y + + + +LE
Sbjct: 125 QFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLETM- 183
Query: 233 SVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQ-PASLYAATKKAGEEIAHTYNHIYGLA 291
+ + +++++S+ + YG +P +E T Q P + Y KK E+I ++ +A
Sbjct: 184 AAHGVKTLIYSSTCATYGEPDIMPITE--ETPQVPINPYGKAKKMAEDIILDFSKNSDMA 241
Query: 292 LTGLRFFTVYG--PWG------RPDM--------AYFFFTKDILQGKTID--VYKTQDDR 333
+ LR+F V G P G RP++ A F + I+ G I YKT D
Sbjct: 242 VMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIMPGLQIKGTDYKTADGT 301
Query: 334 EVARDFTYIDDVVKGCVGATGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKA 393
V RD+ + D+V V A +K P ++ +YN+G V V + +
Sbjct: 302 CV-RDYIDVTDLVDAHVKAL----QKAKPRKVGIYNVGTGKGSSVKEFVEACKKATGVEI 356
Query: 394 KKHVIRMPRN-GDVPYTHANVSLAYKDFGYKPT-TDLAAGLRKFVKWYVSYYGIQPRVKK 451
K + +PR GD +++ S K+ + T+L L +W +
Sbjct: 357 K--IDYLPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKLH--------- 405
Query: 452 ENGFSTTTSTI 462
NG+ TTS++
Sbjct: 406 RNGYGLTTSSV 416
>sp|O84903|GALE_LACCA UDP-glucose 4-epimerase OS=Lactobacillus casei GN=galE PE=3 SV=1
Length = 331
Score = 89.0 bits (219), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 93/185 (50%), Gaps = 13/185 (7%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLK-RARQKLLQKHQVFIVEG 177
MT+ V G AG++GSH L G+ V+ LDN + + ++ RAR +G
Sbjct: 1 MTIAVLGGAGYIGSHTVKQLLAAGEDVVVLDNLITGHRKAVDPRAR----------FYQG 50
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
D+ D L+++F ++H AA + V +M++P Y +N G + LLE +
Sbjct: 51 DIRDYHFLSQVFSQEKIDGIVHFAAFSIVPESMKDPLKYFDNNTGGMITLLEAMNQFGIK 110
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRF 297
IV++S+++ YG QVP E+ P + Y +K A E+I H + YGL LR+
Sbjct: 111 -KIVFSSTAATYGEPKQVPIKET-DPQVPTNPYGESKLAMEKIMHWADVAYGLKFVALRY 168
Query: 298 FTVYG 302
F V G
Sbjct: 169 FNVAG 173
>sp|Q9SYM5|RHM1_ARATH Probable rhamnose biosynthetic enzyme 1 OS=Arabidopsis thaliana
GN=RHM1 PE=1 SV=1
Length = 669
Score = 89.0 bits (219), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 133/338 (39%), Gaps = 46/338 (13%)
Query: 121 VLVTGAAGFVGSHCS-----------LALKKRGDGVLGLDNFN-SYYDPSLKRARQKLLQ 168
+L+TGAAGF+ SH + + + + D L N N S + P+ K
Sbjct: 9 ILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFK-------- 60
Query: 169 KHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLL 228
V+GD+ A L+ L ++H AAQ V + N + +NI G LL
Sbjct: 61 -----FVKGDIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLL 115
Query: 229 EVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQ--PASLYAATKKAGEEIAHTYNH 286
E CK + S+ VYG + +H Q P + Y+ATK E + Y
Sbjct: 116 EACKVTGQIRRFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGR 175
Query: 287 IYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVV 346
YGL + R VYGP P+ F ++G+ + ++ D R + Y +DV
Sbjct: 176 SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGQVLPIH---GDGSNVRSYLYCEDVA 232
Query: 347 KG--CVGATGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAK---KHVIRMP 401
+ V G G VYN+G V + + L N + K V P
Sbjct: 233 EAFEVVLHKGEVG--------HVYNIGTKKERRVNDVAKDICKLFNMDPEANIKFVDNRP 284
Query: 402 RNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWY 439
N D Y + L K G+ T GL+K + WY
Sbjct: 285 FN-DQRYFLDDQKL--KKLGWSERTTWEEGLKKTMDWY 319
>sp|Q9LH76|RHM3_ARATH Probable rhamnose biosynthetic enzyme 3 OS=Arabidopsis thaliana
GN=RHM3 PE=1 SV=1
Length = 664
Score = 88.6 bits (218), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 135/326 (41%), Gaps = 22/326 (6%)
Query: 121 VLVTGAAGFVGSHCSLALKKR--GDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
+L+TGAAGF+ SH + L + ++ LD + Y +LK + F V+GD
Sbjct: 9 ILITGAAGFIASHVANRLVRSYPDYKIVVLDKLD--YCSNLKNLNPSKSSPNFKF-VKGD 65
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ A L+ L ++H AAQ V + N + +NI G LLE CK
Sbjct: 66 IASADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQ--PASLYAATKKAGEEIAHTYNHIYGLALTGLR 296
+ S+ VYG + +H Q P + Y+ATK E + Y YGL + R
Sbjct: 126 RFIHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
Query: 297 FFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGATGSG 356
VYGP P+ F + GK + ++ D R + Y +DV + G
Sbjct: 186 GNNVYGPNQFPEKLIPKFILLAMNGKPLPIH---GDGSNVRSYLYCEDVAEAFEVVLHKG 242
Query: 357 GKKRGPAQLRVYNLGNTSP---VPVGRLVSILENLLNTKAKKHVIRMPRNGDVPYTHANV 413
VYN+G T + V +S L + ++V P N D Y +
Sbjct: 243 EVN------HVYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFN-DQRYFLDDQ 295
Query: 414 SLAYKDFGYKPTTDLAAGLRKFVKWY 439
L K G+ T+ GLRK ++WY
Sbjct: 296 KL--KKLGWCERTNWEEGLRKTMEWY 319
>sp|Q59745|EXOB_RHILT UDP-glucose 4-epimerase OS=Rhizobium leguminosarum bv. trifolii
GN=exoB PE=3 SV=1
Length = 327
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 140/336 (41%), Gaps = 31/336 (9%)
Query: 118 GMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEG 177
G TVLV G AG++GSH L L +G + DNF++ + ++ + EG
Sbjct: 3 GETVLVVGGAGYIGSHTCLDLANKGYRPVVFDNFSNGHREFVRWGPAE----------EG 52
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
D+ D L ++ +LH AA V ++++P S+ +N+ G + LL ++
Sbjct: 53 DIRDRARLDEVLAKHKPAAILHFAALIEVGESVKDPVSFYENNVIGTLTLLSAAQAAGIN 112
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRF 297
+ V++S+ + YGL VP E+HR P + Y TK E+ Y+ L LR+
Sbjct: 113 -AFVFSSTCATYGLPQSVPLDETHRQ-VPINPYGRTKYIVEQALADYDQYGSLRSVVLRY 170
Query: 298 FTV--------YGPWGRPDMAYFFFTKDILQGKTIDV------YKTQDDREVARDFTYID 343
F G W +P+ D G+ Y+T+D V RD+ ++
Sbjct: 171 FNAAGADFEGRIGEWHQPETHAIPLAIDAALGRRQGFKVFGSDYETRDGTCV-RDYIHVL 229
Query: 344 DVVKGCVGATGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRN 403
D+ V A K L NLG + V L+ +E + N I R
Sbjct: 230 DLADAHVRAVEYLLKGGDSVAL---NLGTGTGTTVKELLGAIEEVSNRPFPVEYIGR-RE 285
Query: 404 GDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWY 439
GD AN A G+ P DL+ +R W+
Sbjct: 286 GDSHTLVANNDKARDVLGWVPQYDLSEIIRSAWDWH 321
>sp|Q8VDR7|TGDS_MOUSE dTDP-D-glucose 4,6-dehydratase OS=Mus musculus GN=Tgds PE=2 SV=2
Length = 355
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 143/329 (43%), Gaps = 27/329 (8%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDG--VLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
VLVTG AGF+ SH ++L + ++ LD + Y SLK + + K ++GD
Sbjct: 20 VLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLD--YCASLKNL-EPVSNKQNYKFIQGD 76
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ D+ + LF+V VLH AAQ V + + N+ G L+ +
Sbjct: 77 ICDSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAGVE- 135
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFF 298
++ S+ VYG + F ES QP + YA++K A E +Y Y + R
Sbjct: 136 KFIYVSTDEVYGGSLDQEFDES-SPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSS 194
Query: 299 TVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGATGSGGK 358
VYGP P+ F + + ++ + R R+F Y DVV+ + G
Sbjct: 195 NVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQR---RNFLYAADVVEAFLTVLTKG-- 249
Query: 359 KRGPAQLRVYNLGNTSPVPVGRLVSILENLL---NTKAK-----KHVIRMPRNGDVPYTH 410
P + +YN+G + V +L L L+ N++++ +V P N D+ Y
Sbjct: 250 --EPGE--IYNIGTNFEMSVVQLAKELIQLIKETNSESETESWVDYVSDRPHN-DMRYPM 304
Query: 411 ANVSLAYKDFGYKPTTDLAAGLRKFVKWY 439
+ + G+KP G++K V+WY
Sbjct: 305 KSEKI--HSLGWKPKVPWEEGIKKTVEWY 331
>sp|P56985|GALE_NEIMB UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup B
(strain MC58) GN=galE PE=3 SV=1
Length = 339
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 150/342 (43%), Gaps = 40/342 (11%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLN 180
+LVTG GF+GSH ++L K G V+ LDN + L R K + ++ +GD+
Sbjct: 4 ILVTGGTGFIGSHTVVSLLKSGHQVVILDNLCNSSINILPRL--KTITGQEIPFYQGDIR 61
Query: 181 DAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSI 240
D +L ++F V+H A V ++ P Y +N++G + L E SI
Sbjct: 62 DREILRRIFAENRIDSVIHFAGLKAVGESVAEPMKYYDNNVSGSLVLAEEMARAGVF-SI 120
Query: 241 VWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEI---AHTYNHIYGLALTGLRF 297
V++SS++VYG +VP++E S Y A+K E I + + + L LR+
Sbjct: 121 VFSSSATVYGDPGKVPYTEDMPPGDTTSPYGASKSMVERILTDIQKADPRWSMIL--LRY 178
Query: 298 FTVYG----------PWGRPDMAYFFFTKDILQGKTI------DVYKTQDDREVARDFTY 341
F G P G P+ + + + GK D Y T D + RD+ +
Sbjct: 179 FNPIGAHESGLIGEQPNGIPNNLLPYICQ-VAAGKLPQLAVFGDDYPTPDGTGM-RDYIH 236
Query: 342 IDDVVKGCVGATGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKK-----H 396
+ D+ +G V A + K A + NLG+ GR S+LE + +A +
Sbjct: 237 VMDLAEGHVAAMQA---KSNVAGTHLLNLGS------GRASSVLEIIRAFEAASGLTIPY 287
Query: 397 VIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 438
++ R GD+ +A+ S G++ DL + +W
Sbjct: 288 EVKPRRAGDLACFYADPSYTKAQIGWQTQRDLTQMMEDSWRW 329
>sp|Q9W0P5|GALE_DROME Probable UDP-glucose 4-epimerase OS=Drosophila melanogaster GN=Gale
PE=2 SV=1
Length = 350
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 142/341 (41%), Gaps = 28/341 (8%)
Query: 120 TVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLK----RARQKLLQKHQVFIV 175
TVLVTG AG++GSH L + G V+ +DN + Y K +R + + +V
Sbjct: 5 TVLVTGGAGYIGSHTVLEMLNAGYNVICVDNLCNAYSSGAKLPEALSRVQEITGKKVNFY 64
Query: 176 EGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVN 235
D+ D + +F V H AA V + + P Y +N+ G LLE N
Sbjct: 65 RVDITDREQVRSVFQEHKIDMVAHFAALKAVGESCRIPLQYYHNNMTGTNVLLEAMAD-N 123
Query: 236 PQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEI-AHTYNHIYGLALTG 294
V++SS++VYG +P +E H T S Y TK EEI A+
Sbjct: 124 NVFKFVYSSSATVYGEPKFLPVTEEHPTGNCTSPYGKTKYFTEEILKDLCKSDKRWAVVS 183
Query: 295 LRFFTVYG----------PWGRPDMAYFFFTKDILQGK--TIDVYKTQ---DDREVARDF 339
LR+F G P G P+ + + + G+ ++ VY + D RD+
Sbjct: 184 LRYFNPVGAHISGRIGEDPNGEPNNLMPYIAQ-VAVGRRPSLSVYGSDFPTHDGTGVRDY 242
Query: 340 TYIDDVVKGCVGATGSGGKKRGPAQ--LRVYNLGNTSPVPVGRLVSILENLLNTKAKKHV 397
+I D+ +G V A K R A+ YNLG V +V E K +
Sbjct: 243 IHIVDLAEGHVKAL---DKLRNIAETGFFAYNLGTGVGYSVLDMVKAFEKASGKKVNYTL 299
Query: 398 IRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 438
+ R+GDV +A+ +LA K G+K + +W
Sbjct: 300 VDR-RSGDVATCYADATLADKKLGWKAERGIDKMCEDTWRW 339
>sp|Q59678|GALE_PASHA UDP-glucose 4-epimerase OS=Pasteurella haemolytica GN=galE PE=3
SV=1
Length = 338
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 143/337 (42%), Gaps = 26/337 (7%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M +LVTG AG++GSH + L ++ LDN ++ + SL+R +Q + V +GD
Sbjct: 1 MAILVTGGAGYIGSHTLVELLNENREIVVLDNLSNSSEVSLERVKQ--ITGKSVKFYQGD 58
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ D +L K+F V+H A V +N + +N+ G + L+E N
Sbjct: 59 ILDRDILRKIFAENQIESVIHFAGLKAVGETSENRYVTIKNNVTGSIVLVEEMLKANVN- 117
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAH-TYNHIYGLALTGLRF 297
+IV++SS++VYG +P ES + Y +K E I T L+ LR+
Sbjct: 118 TIVFSSSATVYGDPQIIPIVESCPVGGTTNPYGTSKYMVERILEDTVKAFPQLSAVVLRY 177
Query: 298 FTVYG----------PWGRPDMAYFFFTKDILQGKTIDV------YKTQDDREVARDFTY 341
F G P G P+ F ++ + GK + Y T D V RD+ +
Sbjct: 178 FNRVGAHESGLIGEDPNGIPNNLMPFISQ-VAVGKLPQLSVFGGDYNTHDGTGV-RDYIH 235
Query: 342 IDDVVKGCVGATGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMP 401
+ D+ G + A K + A VYNLG + V +V E V+
Sbjct: 236 VVDLALGHLKAL---DKHQNDAGFHVYNLGTGTGYSVLDMVKAFEAANGITIPYKVVDR- 291
Query: 402 RNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 438
R GD+ ++ A + G++ L ++ W
Sbjct: 292 RPGDIAVCYSAPQKALEQLGWETERGLEQMMKDTWNW 328
>sp|Q7WTB1|GALE_LACHE UDP-glucose 4-epimerase OS=Lactobacillus helveticus GN=galE PE=2
SV=1
Length = 330
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 147/326 (45%), Gaps = 42/326 (12%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M VLV G AG++GSH L K G+ VL LD +L +K + F +GD
Sbjct: 1 MKVLVIGGAGYIGSHAVRELVKEGNDVLVLD--------ALYTGHRKAVDPKAKF-YQGD 51
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ D L++K+ V+H AA + V +++ P Y +N+ G ++LL+ N +
Sbjct: 52 IEDTFLVSKILRDEKIDAVMHFAAYSLVPESVKKPLKYYDNNVTGMISLLQAMNDANVK- 110
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFF 298
+V++SS++ YG+ ++P +E + P + Y TK E+I + G+ T LR+F
Sbjct: 111 YLVFSSSAATYGIPKKLPITEDTPLN-PINPYGETKMMMEKIMAWADKADGIKYTALRYF 169
Query: 299 TVYGP-----WGRPDMAYFFFTKDILQ------GK-TI--DVYKTQDDREVARDFTYIDD 344
V G G +IL+ GK TI D Y T+D V RD+ ++D
Sbjct: 170 NVAGASSDGSIGEDHAPETHLIPNILKSAISGDGKFTIFGDDYDTKDGTNV-RDYVQVED 228
Query: 345 VVKGCVGATGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMP--- 401
++ + A K + V+NLG S LE +L + K I +P
Sbjct: 229 LIDAHILALKHMMKTN---KSDVFNLGTAHG------YSNLE-ILESAKKVTGIDIPYTM 278
Query: 402 ---RNGDVPYTHANVSLAYKDFGYKP 424
R GD A+ + A G+KP
Sbjct: 279 GPRRGGDPDSLVADSTKARTVLGWKP 304
>sp|O65781|GALE2_CYATE UDP-glucose 4-epimerase GEPI48 OS=Cyamopsis tetragonoloba PE=2 SV=1
Length = 350
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 148/343 (43%), Gaps = 37/343 (10%)
Query: 120 TVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKL------LQKHQVF 173
TVLVTG AG++GSH L L G + +DN ++ + ++ R ++ L H++
Sbjct: 5 TVLVTGGAGYIGSHTVLQLLLGGFKAVVVDNLDNSSETAIHRVKELAGKFAGNLSFHKL- 63
Query: 174 IVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKS 233
DL D L K+F F V+H A V ++Q P Y +N+ G + L EV +
Sbjct: 64 ----DLRDRDALEKIFSSTKFDSVIHFAGLKAVGESVQKPLLYYDNNLIGTIVLFEVM-A 118
Query: 234 VNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAH-TYNHIYGLAL 292
+ +V++SS++VYGL +VP +E A+ Y TK EEI Y +
Sbjct: 119 AHGCKKLVFSSSATVYGLPKEVPCTEEFPL-SAANPYGRTKLIIEEICRDIYRAEQEWKI 177
Query: 293 TGLRFFTVYG----------PWGRPDMAYFFFTKDILQGK--TIDVYK---TQDDREVAR 337
LR+F G P G P+ F + + G+ + V+ T D R
Sbjct: 178 ILLRYFNPVGAHPSGYIGEDPRGIPN-NLMPFVQQVAVGRRPALTVFGNDYTTSDGTGVR 236
Query: 338 DFTYIDDVVKGCVGATGSGGKKRGPAQL--RVYNLGNTSPVPVGRLVSILENLLNTKAKK 395
D+ ++ D+ G + A +K ++ VYNLG V +V E + K
Sbjct: 237 DYIHVVDLADGHIAAL----RKLNDPKIGCEVYNLGTGKGTSVLEMVKAFEQ-ASGKKIP 291
Query: 396 HVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 438
V+ R GD +A+ + A ++ +K + R W
Sbjct: 292 LVMAGRRPGDAEVVYASTNKAERELNWKAKYGIDEMCRDQWNW 334
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 184,293,844
Number of Sequences: 539616
Number of extensions: 7992191
Number of successful extensions: 56246
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 337
Number of HSP's that attempted gapping in prelim test: 53652
Number of HSP's gapped (non-prelim): 2339
length of query: 469
length of database: 191,569,459
effective HSP length: 121
effective length of query: 348
effective length of database: 126,275,923
effective search space: 43944021204
effective search space used: 43944021204
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)