Your job contains 1 sequence.
>012178
MQPCSSGGEMQGISSLLSNGSHEQQSQIHQSATFDPTSQDDFLEQMLSSLPSCSWTDLKS
PWGVVDLNPNNNNNNINNKQPRDLSDETAPSTTQENNVPAGFQFDESMILASKMRQHQIS
GNTGSGNNNSAAAKFMMQQQQQQIMMAAARGGIGLPLSLGNGGDNDIVDVSSFKSQQGGD
GSVQALYNGFTGSLHGSTQPQHFHHLQGGSMPGQTFGAPGPVMNQTQAQASGSTGGGGGG
GNTPAQQPKQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI
IDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMSSEVRGGDCIQANGRNPNGAQTTSANDS
LTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRNPIISTSNNNNNN
GNPHHNPLLQSNGEGPTSPSMSVLTVQSATMGNGGADGSVKDAASVSKP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012178
(469 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q6EPZ6 - symbol:P0014G10.34 "BHLH transcription... 581 6.5e-68 3
UNIPROTKB|Q6K8Y4 - symbol:OJ1695_H09.18 "Basic helix-loop... 410 7.9e-64 3
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 562 1.1e-58 2
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 463 8.7e-54 3
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 492 9.8e-50 2
TAIR|locus:2132303 - symbol:UNE12 "AT4G02590" species:370... 368 4.0e-37 2
UNIPROTKB|Q7Y1H4 - symbol:OSJNBa0094F01.11 "Putative unch... 377 8.3e-35 1
TAIR|locus:2007534 - symbol:AT1G03040 "AT1G03040" species... 339 1.7e-34 2
UNIPROTKB|Q6Z7E7 - symbol:P0020C11.18 "Putative bHLH tran... 358 9.7e-33 1
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 354 2.3e-32 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 181 2.4e-11 1
UNIPROTKB|Q84T08 - symbol:OSJNBa0087C10.10 "BHLH transcri... 173 4.3e-11 1
UNIPROTKB|Q84QW1 - symbol:OJ1191_A10.109 "BHLH transcript... 170 8.4e-11 2
UNIPROTKB|Q69WS3 - symbol:OJ1118_E12.15 "Putative bHLH pr... 166 1.6e-10 2
TAIR|locus:2152551 - symbol:AT5G48560 "AT5G48560" species... 174 2.9e-10 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 166 6.1e-10 1
TAIR|locus:2115200 - symbol:BEE2 "AT4G36540" species:3702... 165 8.7e-10 1
UNIPROTKB|Q6Z2G7 - symbol:P0680A05.9 "Putative bHLH trans... 166 1.1e-09 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 164 1.3e-09 1
TAIR|locus:2095198 - symbol:AT3G23690 "AT3G23690" species... 165 1.6e-09 1
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 145 1.7e-09 1
TAIR|locus:2201906 - symbol:AT1G10120 "AT1G10120" species... 164 2.0e-09 1
TAIR|locus:2079676 - symbol:AT3G07340 "AT3G07340" species... 165 2.5e-09 1
TAIR|locus:2199221 - symbol:RSL4 "AT1G27740" species:3702... 155 2.5e-09 2
UNIPROTKB|Q75M33 - symbol:P0668H12.5 "BHLH transcription ... 156 2.6e-09 2
UNIPROTKB|Q5N802 - symbol:P0004D12.24 "BHLH transcription... 165 2.7e-09 2
UNIPROTKB|Q94LR3 - symbol:OSJNBa0010C11.7 "Helix-loop-hel... 143 2.8e-09 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 150 2.9e-09 1
TAIR|locus:2139484 - symbol:CIB1 "AT4G34530" species:3702... 160 4.5e-09 1
TAIR|locus:505006688 - symbol:AT5G50915 "AT5G50915" speci... 157 6.0e-09 1
TAIR|locus:504954900 - symbol:AT5G43175 "AT5G43175" speci... 151 6.7e-09 1
TAIR|locus:2172209 - symbol:AT5G62610 "AT5G62610" species... 155 9.5e-09 1
UNIPROTKB|Q8S490 - symbol:rau1 "Transcription factor RAU1... 138 9.8e-09 1
UNIPROTKB|Q2QMV9 - symbol:LOC_Os12g39850 "Helix-loop-heli... 155 1.3e-08 1
TAIR|locus:2205420 - symbol:AT1G68920 species:3702 "Arabi... 159 1.3e-08 1
TAIR|locus:2202867 - symbol:BPEp "AT1G59640" species:3702... 156 1.4e-08 1
UNIPROTKB|Q5VR96 - symbol:P0038C05.31-1 "Os06g0275600 pro... 157 1.8e-08 1
UNIPROTKB|Q69JJ6 - symbol:OSJNBa0026C08.22 "TA1 protein-l... 155 2.9e-08 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 156 3.3e-08 1
UNIPROTKB|Q84LH4 - symbol:OSJNBb0011H13.2 "Putative Helix... 152 3.5e-08 1
TAIR|locus:2027809 - symbol:BEE3 "AT1G73830" species:3702... 148 4.8e-08 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 151 5.3e-08 3
TAIR|locus:2118934 - symbol:RSL2 "AT4G33880" species:3702... 151 5.5e-08 1
TAIR|locus:2032990 - symbol:CES "AT1G25330" species:3702 ... 144 5.9e-08 1
UNIPROTKB|Q6ZCV8 - symbol:P0028A08.20 "Os08g0487700 prote... 151 6.0e-08 1
TAIR|locus:2028804 - symbol:CIB5 "AT1G26260" species:3702... 151 6.9e-08 1
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 152 7.8e-08 1
TAIR|locus:2053766 - symbol:AT2G42300 "AT2G42300" species... 148 1.0e-07 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 150 1.0e-07 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 149 1.4e-07 1
TAIR|locus:2014144 - symbol:BEE1 "BR enhanced expression ... 143 1.8e-07 1
UNIPROTKB|Q8GZV6 - symbol:OJ1017C11.10 "Putative uncharac... 157 1.9e-07 2
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 146 2.6e-07 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 145 4.2e-07 1
TAIR|locus:4010713915 - symbol:AT4G28811 species:3702 "Ar... 144 7.5e-07 1
UNIPROTKB|Q6ZFY4 - symbol:OJ1311_H06.19 "BHLH protein-lik... 137 1.4e-06 1
UNIPROTKB|Q6AV35 - symbol:OSJNBa0063J18.7 "Putative trans... 135 2.7e-06 1
TAIR|locus:2141573 - symbol:FBH2 "AT4G09180" species:3702... 133 2.8e-06 1
TAIR|locus:2028957 - symbol:RHD6 "AT1G66470" species:3702... 128 2.8e-06 2
TAIR|locus:2008693 - symbol:FBH1 "AT1G35460" species:3702... 132 3.6e-06 1
TAIR|locus:2059979 - symbol:FBH4 "AT2G42280" species:3702... 135 3.7e-06 1
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 139 3.7e-06 2
TAIR|locus:2156015 - symbol:RSL1 "AT5G37800" species:3702... 129 1.2e-05 1
UNIPROTKB|Q9ASJ3 - symbol:P0439B06.24 "Putative uncharact... 127 1.9e-05 1
TAIR|locus:2026037 - symbol:FBH3 "AT1G51140" species:3702... 129 1.9e-05 1
TAIR|locus:2115683 - symbol:AT4G05170 "AT4G05170" species... 103 2.0e-05 2
UNIPROTKB|Q2R0R9 - symbol:LOC_Os11g41640 "Helix-loop-heli... 120 2.4e-05 2
TAIR|locus:2041369 - symbol:PIL1 "phytochrome interacting... 130 2.5e-05 2
UNIPROTKB|Q8W5G3 - symbol:OSJNBa0002J24.23 "Helix-loop-he... 126 2.8e-05 1
UNIPROTKB|Q2QQ32 - symbol:LOC_Os12g32400 "Helix-loop-heli... 118 5.6e-05 1
UNIPROTKB|Q6Z9R3 - symbol:P0461F06.33 "BHLH protein famil... 118 0.00013 1
TAIR|locus:2144791 - symbol:HEC3 "AT5G09750" species:3702... 116 0.00016 1
UNIPROTKB|Q7XT55 - symbol:OSJNBa0084K20.3 "OSJNBa0076N16.... 115 0.00019 1
TAIR|locus:2204898 - symbol:HFR1 "AT1G02340" species:3702... 118 0.00020 1
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 122 0.00021 2
UNIPROTKB|Q67TR8 - symbol:B1342C04.6 "Basic helix-loop-he... 115 0.00025 1
TAIR|locus:2076581 - symbol:AT3G57800 "AT3G57800" species... 99 0.00027 2
UNIPROTKB|Q8S0N2 - symbol:P0692C11.41-1 "BHLH transcripti... 118 0.00035 1
TAIR|locus:4010713916 - symbol:AT4G28815 species:3702 "Ar... 116 0.00036 1
UNIPROTKB|Q651K2 - symbol:B1089G05.30 "BHLH protein-like"... 115 0.00043 1
TAIR|locus:2045263 - symbol:AT2G31730 species:3702 "Arabi... 94 0.00045 2
TAIR|locus:2155543 - symbol:HEC1 "HECATE 1" species:3702 ... 113 0.00045 1
TAIR|locus:2074865 - symbol:HEC2 "AT3G50330" species:3702... 112 0.00053 1
UNIPROTKB|Q6Z1F9 - symbol:OSJNBa0033D24.39 "BHLH transcri... 100 0.00093 1
>UNIPROTKB|Q6EPZ6 [details] [associations]
symbol:P0014G10.34 "BHLH transcription factor PTF1-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 HOGENOM:HOG000239571 EMBL:AP005784
RefSeq:NP_001175840.1 UniGene:Os.59658
EnsemblPlants:LOC_Os09g25040.1 GeneID:9272478 KEGG:osa:9272478
OMA:SMSVLTA Uniprot:Q6EPZ6
Length = 499
Score = 581 (209.6 bits), Expect = 6.5e-68, Sum P(3) = 6.5e-68
Identities = 147/284 (51%), Positives = 167/284 (58%)
Query: 151 GGIGLPLSLGNGGDNDIVD--VSSFKSQQGGDGSVQALYNG-FTGSLHGSTQPQHFH-HL 206
GG+ LPL+LG+GG V + + + G G +Y G F GSLH Q QHF H
Sbjct: 145 GGLLLPLTLGSGGSGGDVQALLKAAAANSAGGGDAGGVYGGGFAGSLH--QQQQHFQPHP 202
Query: 207 QGG-SMPGQTFGAPGPVMNQXXXXXXXXXX--XXXXXXNTPAQQPKQRVRARRGQATDPH 263
Q ++P Q+FG G PA P+QRVRARRGQATDPH
Sbjct: 203 QTAPTIPTQSFGGGGGGGGGGTASGGGAAQPQAGAAGGGAPAP-PRQRVRARRGQATDPH 261
Query: 264 SXXXXXXXXXXXXXMKALQELVPNANK---TDKASMLDEIIDYVKFLQLQVK-------- 312
S MKALQELVPNANK TDKASMLDEIIDYVKFLQLQVK
Sbjct: 262 SIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQLQVKASTYTKLL 321
Query: 313 --VLSMSRXXXXXXXXXXXXDMSSEVRGGDCIQANGRNPNGAQTTSANDSLTVTEHQVAK 370
VLSMSR DMSSE RGG ANG GA + +DSLTVTE QVAK
Sbjct: 322 IHVLSMSRLGGAAAVAPLVADMSSEGRGGGA--ANG----GAPAAAGSDSLTVTEQQVAK 375
Query: 371 LMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRNPIISTS 414
LMEEDMG+AMQYLQGKGLCLMPISLA+AIS+ATCH R P+++ +
Sbjct: 376 LMEEDMGTAMQYLQGKGLCLMPISLASAISSATCHLRPPVVAAA 419
Score = 142 (55.0 bits), Expect = 7.3e-13, Sum P(3) = 7.3e-13
Identities = 61/188 (32%), Positives = 79/188 (42%)
Query: 306 FLQLQVKVLSMSRXXXXXXXXXXXXDMSSEVRGGDCIQANGRNPNGAQ----TTSANDSL 361
+ +L + VLSMSR DMSSE RGG ANG P A T +
Sbjct: 317 YTKLLIHVLSMSRLGGAAAVAPLVADMSSEGRGGGA--ANGGAPAAAGSDSLTVTEQQVA 374
Query: 362 TVTEHQVAKLMEEDMGSAMQYLQ-------GKGLC-LMPISLATA------ISTATCHSR 407
+ E + M+ G + + C L P +A A + A +
Sbjct: 375 KLMEEDMGTAMQYLQGKGLCLMPISLASAISSATCHLRPPVVAAAQQFPAGLGAAAAAAH 434
Query: 408 NPIISTSXXXXXXXXXXXXXLLQSNGEGPTSPSMSVLTVQSATMGNGG---ADGS---VK 461
+ +S + L ++G P SPSMSVLT QSA M NGG ADG +K
Sbjct: 435 HHQLSAAAAAAAMRGHLPG--LNADGSVPASPSMSVLTAQSA-MANGGGGAADGEGSQLK 491
Query: 462 DAASVSKP 469
DAASVSKP
Sbjct: 492 DAASVSKP 499
Score = 76 (31.8 bits), Expect = 6.5e-68, Sum P(3) = 6.5e-68
Identities = 14/19 (73%), Positives = 16/19 (84%)
Query: 40 DDFLEQMLSSLPSCSWTDL 58
DDFL+QMLSSLP +W DL
Sbjct: 33 DDFLDQMLSSLPPSAWPDL 51
Score = 63 (27.2 bits), Expect = 6.5e-68, Sum P(3) = 6.5e-68
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 101 GFQFDESMILASKMRQHQI 119
G +DES +LAS++RQHQI
Sbjct: 76 GGPYDESAMLASRLRQHQI 94
>UNIPROTKB|Q6K8Y4 [details] [associations]
symbol:OJ1695_H09.18 "Basic helix-loop-helix (BHLH)-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000239571 EMBL:AP003975 EMBL:AP004094
EnsemblPlants:LOC_Os02g55250.1 OMA:GQDDFFD Uniprot:Q6K8Y4
Length = 463
Score = 410 (149.4 bits), Expect = 7.9e-64, Sum P(3) = 7.9e-64
Identities = 94/137 (68%), Positives = 100/137 (72%)
Query: 278 MKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRXXXXXXXXXXXXDMSSEVR 337
MKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSR +MSSE
Sbjct: 260 MKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGASAVAPLVANMSSESN 319
Query: 338 G-GDCIQA--NGRNPNGAQTTSAND--SLTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMP 392
G G+ + NG NG+ N +L VTE QVAKLMEEDMGSAMQYLQGKGLCLMP
Sbjct: 320 GNGNATSSSGNGEAANGSSNGDNNGGGTLRVTEQQVAKLMEEDMGSAMQYLQGKGLCLMP 379
Query: 393 ISLATAISTATCHSRNP 409
ISLATAIS+AT S P
Sbjct: 380 ISLATAISSATSSSLLP 396
Score = 205 (77.2 bits), Expect = 7.9e-64, Sum P(3) = 7.9e-64
Identities = 60/165 (36%), Positives = 71/165 (43%)
Query: 104 FDESMILASKMRQHQIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGIGLPLSLGNGG 163
FD+S +LAS++RQHQI G LPLSL
Sbjct: 66 FDDSALLASRLRQHQIDGGGDKPIMLQLSDLHRHHGLAAGDDSGGAAGF--LPLSLFADR 123
Query: 164 DNDIVDVSSFKSQQGGDGSVQALYNGF-TGSLHGST--QPQHFHHLQGGSMPGQTFGAPG 220
D +D ++FKS G G ALYNGF +HG+ QP F QGGSMP Q+FG
Sbjct: 124 SQDDID-AAFKSPNGARGD-HALYNGFGAAGMHGAAAMQPPPFG--QGGSMPAQSFGGGA 179
Query: 221 PVMNQXXXXXXXXXXXXXXXXNT-PAQQPKQRVRARRGQATDPHS 264
A P+QR RARRGQATDPHS
Sbjct: 180 AASGGGGGGSASAAAAAGASSGGGAAAPPRQRQRARRGQATDPHS 224
Score = 66 (28.3 bits), Expect = 7.9e-64, Sum P(3) = 7.9e-64
Identities = 13/22 (59%), Positives = 18/22 (81%)
Query: 39 QDDFLEQMLSSLPSCSWTDLKS 60
QDDF +QMLS+LP+ W++L S
Sbjct: 19 QDDFFDQMLSTLPAV-WSELGS 39
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 562 (202.9 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 151/307 (49%), Positives = 173/307 (56%)
Query: 180 DGS-VQALYNGFT--GSLHGSTQPQHFHHLQGGSMPGQTFGAPGPVMNQXXXXXXXXXXX 236
DGS V ALYNGF+ GSL PQ GG + Q G Q
Sbjct: 73 DGSSVHALYNGFSVAGSLPNFQIPQG----SGGGLMNQQ----GQTQTQTQPQASASTAT 124
Query: 237 XXXXXNTPAQQPKQRVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASM 296
P Q + ++RARRGQATDPHS MKALQELVPN NKTDKASM
Sbjct: 125 GGTVAAPP--QSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASM 182
Query: 297 LDEIIDYVKFLQLQVKVLSMSRXXXXXXXXXXXXDMSSEVRGGDCIQANGRNPNGAQTT- 355
LDEIIDYVKFLQLQVKVLSMSR SE GG A+ G+QT
Sbjct: 183 LDEIIDYVKFLQLQVKVLSMSRLGGAASVSSQI----SEA-GGSHGNASSAMVGGSQTAG 237
Query: 356 SANDSLTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRNPIISTSX 415
++NDS+T+TEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRNP+I +
Sbjct: 238 NSNDSVTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRNPLIPGAV 297
Query: 416 XXXXXXXXXXXXLLQSNGEGPTSPSMSVLTVQSATM----GNGGADGS----------VK 461
GP+ P++S +T+QS + GNG +G+ VK
Sbjct: 298 ADVG---------------GPSPPNLSGMTIQSTSTKMGSGNGKLNGNGVTERSSSIAVK 342
Query: 462 DAASVSK 468
+A SVSK
Sbjct: 343 EAVSVSK 349
Score = 58 (25.5 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 19/48 (39%), Positives = 23/48 (47%)
Query: 14 SSLLSNGSHEQQSQIHQSATFDPTSQDDFLEQMLSSLPSCSWTDLKSP 61
SSLL+ S S TFD +DFL+Q+ SS P S D P
Sbjct: 4 SSLLTPSSSSSSHIQTPSTTFD---HEDFLDQIFSSAPWPSVVDDAHP 48
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 463 (168.0 bits), Expect = 8.7e-54, Sum P(3) = 8.7e-54
Identities = 113/218 (51%), Positives = 126/218 (57%)
Query: 195 HGSTQPQHFHHLQGGSMPGQT-FGAPGPVMNQXXXXXXXXXXXXXXXXNTPAQQPKQRVR 253
H F+ GS+P G+ G Q T Q K +VR
Sbjct: 77 HNHPNDALFNGFSTGSLPFHLPQGSGGQTQTQSQATASATTGGA-----TAQPQTKPKVR 131
Query: 254 ARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 313
ARRGQATDPHS MK+LQELVPN NKTDKASMLDEIIDYVKFLQLQVKV
Sbjct: 132 ARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKV 191
Query: 314 LSMSRXXXXXXXXXXXXDMSSEVRGGDCIQANGRNPNGAQTTSANDSLTVTEHQVAKLME 373
LSMSR SS++ A G + N TS++ +TEHQVAKLME
Sbjct: 192 LSMSRLGGAASA-------SSQISE----DAGGSHEN----TSSSGEAKMTEHQVAKLME 236
Query: 374 EDMGSAMQYLQGKGLCLMPISLATAISTATCHSRNPII 411
EDMGSAMQYLQGKGLCLMPISLAT ISTATC SR+P +
Sbjct: 237 EDMGSAMQYLQGKGLCLMPISLATTISTATCPSRSPFV 274
Score = 68 (29.0 bits), Expect = 8.7e-54, Sum P(3) = 8.7e-54
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 436 PTSPSMSVLTVQSATMGNGGADGSVKDAASVSKP 469
P SP++S V + GNG + +VKDA SVSKP
Sbjct: 280 PLSPNLSTTIVAN---GNGSSLVTVKDAPSVSKP 310
Score = 54 (24.1 bits), Expect = 8.7e-54, Sum P(3) = 8.7e-54
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 14 SSLLSNGSHEQQSQIHQSATFDPTSQDDFLEQMLSSLP 51
SSLL+ S + ATFD DDFL + SS P
Sbjct: 4 SSLLTPSS-SPSPHLQSPATFD---HDDFLHHIFSSTP 37
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 492 (178.3 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
Identities = 119/220 (54%), Positives = 135/220 (61%)
Query: 200 PQHFHHLQGGSMPGQTFGAPGPVMNQXXXXXXXXXXXXXXXXNTPAQQPKQRVRARRGQA 259
P FHH Q G T G+ + Q + P + K RVRARRGQA
Sbjct: 59 PDQFHHPQESG--GPTMGSQEGLQPQGTVSTT----------SAPVVRQKPRVRARRGQA 106
Query: 260 TDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRX 319
TDPHS MK+LQELVPN NKTDKASMLDEII+YV+FLQLQVKVLSMSR
Sbjct: 107 TDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVLSMSRL 166
Query: 320 XXXXXXXXXXXDMSSEVRGG-DCIQA--NGRNPNGAQTTSANDSLTVTEHQVAKLMEEDM 376
+S+E G + + A NG N NG T S+N+SL TE +VAKLMEEDM
Sbjct: 167 GGAGSVGPRLNGLSAEAGGRLNALTAPCNGLNGNGNATGSSNESLRSTEQRVAKLMEEDM 226
Query: 377 GSAMQYLQGKGLCLMPISLATAISTATCHSR----NPIIS 412
GSAMQYLQGKGLCLMPISLATAIS++T HSR NPI S
Sbjct: 227 GSAMQYLQGKGLCLMPISLATAISSSTTHSRGSLFNPISS 266
Score = 43 (20.2 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 38 SQDDFLEQM--LSSLPSCSW 55
+ D FL+ M LSSLP C W
Sbjct: 16 NNDFFLDSMSMLSSLPPC-W 34
>TAIR|locus:2132303 [details] [associations]
symbol:UNE12 "AT4G02590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0031347 "regulation of defense response"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0007275 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000239571
ProtClustDB:CLSN2687635 EMBL:AC002330 EMBL:AL161494 GO:GO:0031347
GO:GO:0009567 EMBL:AF488592 EMBL:AF367328 EMBL:AY143951
EMBL:AY088218 IPI:IPI00545077 IPI:IPI00892352 PIR:T01090
RefSeq:NP_001031577.1 RefSeq:NP_001118919.1 RefSeq:NP_567245.1
UniGene:At.20028 ProteinModelPortal:O22768 SMR:O22768 IntAct:O22768
PaxDb:O22768 PRIDE:O22768 EnsemblPlants:AT4G02590.1
EnsemblPlants:AT4G02590.2 GeneID:828126 KEGG:ath:AT4G02590
TAIR:At4g02590 eggNOG:euNOG02041 InParanoid:O22768 OMA:PAWEKWS
PhylomeDB:O22768 Genevestigator:O22768 Uniprot:O22768
Length = 310
Score = 368 (134.6 bits), Expect = 4.0e-37, Sum P(2) = 4.0e-37
Identities = 89/167 (53%), Positives = 104/167 (62%)
Query: 249 KQRVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYVKFLQ 308
+ RVRARRGQATDPHS ++ALQELVP NKTD+A+M+DEI+DYVKFL+
Sbjct: 143 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLR 202
Query: 309 LQVKVLSMSRXXXXXXXXXXXXDM--SSEVRGGDCIQANGRNPNGAQTTSANDSLTVTEH 366
LQVKVLSMSR DM SS V D GR P A +ND TE
Sbjct: 203 LQVKVLSMSRLGGAGAVAPLVTDMPLSSSVE--DETGEGGRTPQPAWEKWSNDG---TER 257
Query: 367 QVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRNPIIST 413
QVAKLMEE++G+AMQ LQ K LC+MPISLA AI HS+ P S+
Sbjct: 258 QVAKLMEENVGAAMQLLQSKALCMMPISLAMAIY----HSQPPDTSS 300
Score = 47 (21.6 bits), Expect = 4.0e-37, Sum P(2) = 4.0e-37
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 35 DPTSQDDFLEQMLSSLPSCS 54
D T DDF EQ+L LP+ S
Sbjct: 12 DQTPSDDFFEQILG-LPNFS 30
>UNIPROTKB|Q7Y1H4 [details] [associations]
symbol:OSJNBa0094F01.11 "Putative uncharacterized protein
OSJNBa0094F01.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009567
EMBL:AC093713 EMBL:AK104412 RefSeq:NP_001051563.1 UniGene:Os.27522
EnsemblPlants:LOC_Os03g58330.1 GeneID:4334429 KEGG:osa:4334429
OMA:TDGTERQ ProtClustDB:CLSN2694399 Uniprot:Q7Y1H4
Length = 294
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 89/168 (52%), Positives = 105/168 (62%)
Query: 244 PAQQPKQRVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDY 303
PA +PK VRARRGQATDPHS M+ALQELVPN NKTD+A+MLDEI+DY
Sbjct: 127 PAPRPK--VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDY 184
Query: 304 VKFLQLQVKVLSMSRXXXXXXXXXXXXDMSSEVRGGDCIQANGRNPNGAQTTSANDSLTV 363
VKFL+LQVKVLSMSR D+ V+G +A+ + G Q S
Sbjct: 185 VKFLRLQVKVLSMSRLGGAGAVAQLVADIPLSVKG----EAS--DSGGNQQIWEKWSTDG 238
Query: 364 TEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAI-STATCHSRNPI 410
TE QVAKLMEED+G+AMQ+LQ K LC+MPISLA AI T P+
Sbjct: 239 TERQVAKLMEEDIGAAMQFLQSKALCMMPISLAMAIYDTQQTQDGQPV 286
>TAIR|locus:2007534 [details] [associations]
symbol:AT1G03040 "AT1G03040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF251692
EMBL:AC006550 EMBL:AY054469 EMBL:AY114633 IPI:IPI00529284
PIR:B86161 RefSeq:NP_001184895.1 RefSeq:NP_563672.1
UniGene:At.20497 ProteinModelPortal:Q93Y00 SMR:Q93Y00 IntAct:Q93Y00
PaxDb:Q93Y00 PRIDE:Q93Y00 EnsemblPlants:AT1G03040.1 GeneID:839446
KEGG:ath:AT1G03040 TAIR:At1g03040 eggNOG:NOG281566
HOGENOM:HOG000239571 InParanoid:Q93Y00 OMA:SIVKPEM PhylomeDB:Q93Y00
ProtClustDB:CLSN2687635 Genevestigator:Q93Y00 Uniprot:Q93Y00
Length = 302
Score = 339 (124.4 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 89/175 (50%), Positives = 106/175 (60%)
Query: 244 PAQQP--KQRVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEII 301
P QQ + RVRARRGQATDPHS +++LQELVP NKTD+A+M+DEI+
Sbjct: 134 PHQQSTIRPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIV 193
Query: 302 DYVKFLQLQVKVLSMSRXXXXXXXXXXXXDM--SSEVRGGDCIQANGRNPNGAQTTSAND 359
DYVKFL+LQVKVLSMSR +M SS V D QA +ND
Sbjct: 194 DYVKFLRLQVKVLSMSRLGGAGAVAPLVTEMPLSSSVE--DETQA-------VWEKWSND 244
Query: 360 SLTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRNPIISTS 414
TE QVAKLMEE++G+AMQ LQ K LC+MPISLA AI HS+ P S+S
Sbjct: 245 G---TERQVAKLMEENVGAAMQLLQSKALCIMPISLAMAIY----HSQPPDTSSS 292
Score = 51 (23.0 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 29 HQSATFDPTSQDDFLEQML--SSLPSCSWTDLKSPWGV 64
H S + DP+ DDF EQ+L S+ S + L GV
Sbjct: 9 HDSIS-DPSPTDDFFEQILGLSNFSGSSGSGLSGIGGV 45
>UNIPROTKB|Q6Z7E7 [details] [associations]
symbol:P0020C11.18 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:CM000139
EMBL:AP004865 EMBL:AK241924 EnsemblPlants:LOC_Os02g35660.1
OMA:TTAMQYL Uniprot:Q6Z7E7
Length = 524
Score = 358 (131.1 bits), Expect = 9.7e-33, P = 9.7e-33
Identities = 85/164 (51%), Positives = 100/164 (60%)
Query: 248 PKQRVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYVKFL 307
PK RVRARRGQATDPHS MK LQELVPN+NKT+KASMLDEIIDYVKFL
Sbjct: 310 PKPRVRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFL 369
Query: 308 QLQVKVLSMSRXXXXXXXXXXXXDMSSEVRGG--DCIQANGRNPNGAQTTSAN------- 358
QLQVKVLSMSR + +E G ++G GA +
Sbjct: 370 QLQVKVLSMSRLGAAEAVVPLLTETQTESPGFLLSPRSSSGERQAGAGAVTGGLPGDQPE 429
Query: 359 --DSLTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAIS 400
D + E +V KLME++M +AMQYLQ KGLCLMP++LA+AIS
Sbjct: 430 LLDGGAMFEQEVVKLMEDNMTTAMQYLQSKGLCLMPVALASAIS 473
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 81/152 (53%), Positives = 93/152 (61%)
Query: 249 KQRVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYVKFLQ 308
K R RARRGQATDPHS MK LQ LVPN+NK DKASMLDEIIDYVKFLQ
Sbjct: 236 KPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQ 295
Query: 309 LQVKVLSMSRXXXXXXXXXXXXDMSSEVRGGDCIQANGRNPNGAQTTSANDSLTVTEHQV 368
LQVKVLSMSR + +E + A+ + + DS + E +V
Sbjct: 296 LQVKVLSMSRLGAPGAVLPLLRESQTECHSNPSLSASTISQGPPDMPDSEDS-SAFEQEV 354
Query: 369 AKLMEEDMGSAMQYLQGKGLCLMPISLATAIS 400
KLME + SAMQYLQ KGLCLMPI+LA+AIS
Sbjct: 355 VKLMETSIISAMQYLQNKGLCLMPIALASAIS 386
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 181 (68.8 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 47/139 (33%), Positives = 67/139 (48%)
Query: 178 GGDGSVQALYNGFTGSLHGSTQPQHFHHLQGGSMPGQTFGAPGPVMNQXXXXXXXXXXXX 237
GG GS A + GF+G G + G + + GA G ++
Sbjct: 121 GGSGSAAACF-GFSG---GGNNNNVQGNSSGTRVSSSSVGASGNETDEYDCESEEGGEAV 176
Query: 238 XXXXNTPAQQPKQRVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASML 297
+ P R ++R +A + H+ MKALQ L+PN+NKTDKASML
Sbjct: 177 VDEAPSSKSGPSSRSSSKRCRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASML 236
Query: 298 DEIIDYVKFLQLQVKVLSM 316
DE I+Y+K LQLQV++L+M
Sbjct: 237 DEAIEYLKQLQLQVQMLTM 255
>UNIPROTKB|Q84T08 [details] [associations]
symbol:OSJNBa0087C10.10 "BHLH transcription factor,
putative, expressed" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC108906 RefSeq:NP_001051605.1
UniGene:Os.33544 STRING:Q84T08 EnsemblPlants:LOC_Os03g58830.1
GeneID:4334471 KEGG:osa:4334471 OMA:GTSTSEW ProtClustDB:CLSN2694415
Uniprot:Q84T08
Length = 265
Score = 173 (66.0 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 41/77 (53%), Positives = 48/77 (62%)
Query: 244 PAQQPKQ---RVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKT-DKASMLDE 299
P + PKQ VRARRGQATD HS MK LQ+LVP NK KAS+LDE
Sbjct: 125 PPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDE 184
Query: 300 IIDYVKFLQLQVKVLSM 316
II+Y++ LQ QV+ LSM
Sbjct: 185 IINYIQALQRQVEFLSM 201
>UNIPROTKB|Q84QW1 [details] [associations]
symbol:OJ1191_A10.109 "BHLH transcription
factor(GBOF-1)-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP008214
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003888
RefSeq:NP_001062289.1 UniGene:Os.10830
EnsemblPlants:LOC_Os08g41320.1 GeneID:4346087 KEGG:osa:4346087
eggNOG:NOG320619 OMA:ERISQRM ProtClustDB:CLSN2697487 Uniprot:Q84QW1
Length = 405
Score = 170 (64.9 bits), Expect = 8.4e-11, Sum P(2) = 8.4e-11
Identities = 41/76 (53%), Positives = 46/76 (60%)
Query: 244 PAQQPKQ--RVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKT-DKASMLDEI 300
P + PK VRARRGQATD HS MK LQ+LVP NK KA MLDEI
Sbjct: 194 PVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEI 253
Query: 301 IDYVKFLQLQVKVLSM 316
I+YV+ LQ QV+ LSM
Sbjct: 254 INYVQSLQRQVEFLSM 269
Score = 47 (21.6 bits), Expect = 8.4e-11, Sum P(2) = 8.4e-11
Identities = 20/70 (28%), Positives = 25/70 (35%)
Query: 151 GGIGLPLSLGNGGDND-IVDVSSFKSQQGGDGSVQALYNGFTGSLHGSTQPQHFHHLQGG 209
G GL G+ G + +SSF + G G V Y G L G P GG
Sbjct: 41 GDCGLDKLCGDPGFAERAARLSSFNN---GGGGVGQRYGGAGAGLFGMPPPAPGDFAGGG 97
Query: 210 SMPGQTFGAP 219
S + P
Sbjct: 98 SREASSVSDP 107
>UNIPROTKB|Q69WS3 [details] [associations]
symbol:OJ1118_E12.15 "Putative bHLH protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003743
ProteinModelPortal:Q69WS3 Gramene:Q69WS3 Uniprot:Q69WS3
Length = 268
Score = 166 (63.5 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 39/76 (51%), Positives = 47/76 (61%)
Query: 243 TPAQQPKQ---RVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKT-DKASMLD 298
TP + PKQ VRARRGQATD HS MK LQ+LVP NK KAS+LD
Sbjct: 116 TPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLD 175
Query: 299 EIIDYVKFLQLQVKVL 314
EII+Y++ LQ QV+ +
Sbjct: 176 EIINYIQSLQHQVEFM 191
Score = 37 (18.1 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 151 GGIGL--PLSLGNGGDNDIVDVSSFKSQQGGDG 181
GG G P S D+D+ V S + GG G
Sbjct: 38 GGSGRRRPRSDAGPEDDDLSKVVSTSAASGGGG 70
>TAIR|locus:2152551 [details] [associations]
symbol:AT5G48560 "AT5G48560" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB015468 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 eggNOG:NOG283912
ProtClustDB:CLSN2684837 EMBL:AF488610 EMBL:BT002945 EMBL:BT005637
IPI:IPI00543091 RefSeq:NP_199667.1 UniGene:At.43769
ProteinModelPortal:Q9FJL4 SMR:Q9FJL4 IntAct:Q9FJL4 PaxDb:Q9FJL4
PRIDE:Q9FJL4 EnsemblPlants:AT5G48560.1 GeneID:834912
KEGG:ath:AT5G48560 TAIR:At5g48560 InParanoid:Q9FJL4 OMA:SASCYAT
PhylomeDB:Q9FJL4 Genevestigator:Q9FJL4 Uniprot:Q9FJL4
Length = 498
Score = 174 (66.3 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 44/79 (55%), Positives = 49/79 (62%)
Query: 242 NT-PAQQPKQ--RVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANK-TDKASML 297
NT P + PK VRARRGQATD HS MK LQ+LVP NK T KA ML
Sbjct: 288 NTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALML 347
Query: 298 DEIIDYVKFLQLQVKVLSM 316
DEII+YV+ LQ QV+ LSM
Sbjct: 348 DEIINYVQSLQRQVEFLSM 366
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 166 (63.5 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 35/77 (45%), Positives = 52/77 (67%)
Query: 242 NTPAQQPKQ--RVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDE 299
++ ++QP + R R +R +A + H+ MKALQ L+PN++KTDKASMLD+
Sbjct: 14 SSESEQPTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDD 73
Query: 300 IIDYVKFLQLQVKVLSM 316
I+Y+K LQLQV++LSM
Sbjct: 74 AIEYLKQLQLQVQMLSM 90
>TAIR|locus:2115200 [details] [associations]
symbol:BEE2 "AT4G36540" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
PROSITE:PS00678 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161589 EMBL:Z99708
EMBL:AF488591 EMBL:AF370231 EMBL:AY059122 EMBL:AY054588
EMBL:BT000388 EMBL:AY084997 EMBL:AY138254 IPI:IPI00540245
IPI:IPI00548266 PIR:D85431 RefSeq:NP_195372.1 RefSeq:NP_849508.1
UniGene:At.25403 ProteinModelPortal:Q93VJ4 SMR:Q93VJ4 IntAct:Q93VJ4
PRIDE:Q93VJ4 EnsemblPlants:AT4G36540.1 GeneID:829806
KEGG:ath:AT4G36540 TAIR:At4g36540 eggNOG:NOG240651
InParanoid:Q93VJ4 OMA:ELECHID PhylomeDB:Q93VJ4
ProtClustDB:CLSN2685556 Genevestigator:Q93VJ4 Uniprot:Q93VJ4
Length = 304
Score = 165 (63.1 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 39/73 (53%), Positives = 46/73 (63%)
Query: 246 QQPKQ-RVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANK-TDKASMLDEIIDY 303
Q+P VRARRG+ATD HS MK LQ++VP NK T KA MLDEII+Y
Sbjct: 134 QKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINY 193
Query: 304 VKFLQLQVKVLSM 316
V+ LQ QV+ LSM
Sbjct: 194 VQSLQQQVEFLSM 206
>UNIPROTKB|Q6Z2G7 [details] [associations]
symbol:P0680A05.9 "Putative bHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008208 eggNOG:NOG251551 EMBL:AP005323 EMBL:AK119183
RefSeq:NP_001047868.1 UniGene:Os.7751
EnsemblPlants:LOC_Os02g47660.1 GeneID:4330462 KEGG:osa:4330462
OMA:TVESLCQ ProtClustDB:CLSN2693116 Uniprot:Q6Z2G7
Length = 361
Score = 166 (63.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 39/66 (59%), Positives = 43/66 (65%)
Query: 252 VRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 310
VRARRGQATD HS M+ LQELVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 164 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQ 223
Query: 311 VKVLSM 316
V+ LSM
Sbjct: 224 VEFLSM 229
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 164 (62.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 34/70 (48%), Positives = 47/70 (67%)
Query: 247 QPKQRVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYVKF 306
+P+ ++R +A + H+ MKALQ L+PN+NKTDKASMLDE I+Y+K
Sbjct: 92 RPRGGSGSKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQ 151
Query: 307 LQLQVKVLSM 316
LQLQV++LSM
Sbjct: 152 LQLQVQMLSM 161
>TAIR|locus:2095198 [details] [associations]
symbol:AT3G23690 "AT3G23690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
EMBL:AP000377 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AY065441 EMBL:AY096536
EMBL:EU550216 EMBL:EU550217 EMBL:EU550218 EMBL:EU550219
EMBL:EU550220 EMBL:EU550221 EMBL:EU550222 EMBL:EU550223
EMBL:EU550224 EMBL:EU550225 EMBL:EU550226 EMBL:EU550227
EMBL:EU550228 EMBL:EU550229 EMBL:EU550230 EMBL:EU550231
EMBL:EU550232 EMBL:EU550233 EMBL:EU550234 EMBL:EU550235
EMBL:EU550236 EMBL:EU550237 EMBL:EU550238 EMBL:EU550239
EMBL:AF488609 IPI:IPI00545445 RefSeq:NP_189011.2 UniGene:At.6666
ProteinModelPortal:Q9LK48 SMR:Q9LK48 PaxDb:Q9LK48 PRIDE:Q9LK48
EnsemblPlants:AT3G23690.1 GeneID:821950 KEGG:ath:AT3G23690
TAIR:At3g23690 eggNOG:NOG292697 InParanoid:Q9LK48 OMA:MEFNANA
PhylomeDB:Q9LK48 ProtClustDB:CLSN2917952 Genevestigator:Q9LK48
Uniprot:Q9LK48
Length = 371
Score = 165 (63.1 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 40/76 (52%), Positives = 46/76 (60%)
Query: 244 PAQQPKQ--RVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANK-TDKASMLDEI 300
P + PK VRARRGQATD HS M LQ+LVP N+ T KA MLDEI
Sbjct: 181 PPEAPKDYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEI 240
Query: 301 IDYVKFLQLQVKVLSM 316
I+YV+ LQ QV+ LSM
Sbjct: 241 INYVQSLQRQVEFLSM 256
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 145 (56.1 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 30/64 (46%), Positives = 41/64 (64%)
Query: 255 RRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 314
RR ++ + H+ +KALQEL+PN KTDK SMLDE IDY+K LQLQ+++L
Sbjct: 10 RRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQML 69
Query: 315 SMSR 318
M +
Sbjct: 70 VMGK 73
>TAIR|locus:2201906 [details] [associations]
symbol:AT1G10120 "AT1G10120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC004122 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT012655 EMBL:AK221806 EMBL:AK229309
EMBL:AK230347 EMBL:AF488606 IPI:IPI00541831 PIR:T00632
RefSeq:NP_172483.4 UniGene:At.43391 UniGene:At.69296
ProteinModelPortal:Q6NKN9 SMR:Q6NKN9 EnsemblPlants:AT1G10120.1
GeneID:837549 KEGG:ath:AT1G10120 TAIR:At1g10120 eggNOG:NOG271189
HOGENOM:HOG000090626 InParanoid:Q6NKN9 OMA:GESSHED PhylomeDB:Q6NKN9
ProtClustDB:CLSN2681496 Genevestigator:Q6NKN9 Uniprot:Q6NKN9
Length = 366
Score = 164 (62.8 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 58/164 (35%), Positives = 77/164 (46%)
Query: 246 QQPKQR---VRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANK-TDKASMLDEII 301
+ PK+ +RARRGQAT+ HS M+ LQELVP NK T KA MLDEII
Sbjct: 197 EAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEII 256
Query: 302 DYVKFLQLQVKVLSMSRXXXXXXXXXXXXDMSSEVRGGDCIQANGRN-PN-------GAQ 353
+YV+ LQ QV+ LSM D+ + D +Q+ RN P G Q
Sbjct: 257 NYVQSLQQQVEFLSMK---LATVNPEINIDID-RILAKDLLQSRDRNTPTLGLNPFAGFQ 312
Query: 354 TTSANDSLTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLAT 397
N S T T Q L + + S +Q L G P ++++
Sbjct: 313 GNIPNLSAT-TNPQYNPLPQTTLESELQNLYQMGFVSNPSTMSS 355
>TAIR|locus:2079676 [details] [associations]
symbol:AT3G07340 "AT3G07340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC009853 EMBL:AK175369 EMBL:AK175496
EMBL:AK176563 EMBL:AK176663 EMBL:BT026497 EMBL:AF488595
IPI:IPI00521004 RefSeq:NP_187390.1 UniGene:At.40357
ProteinModelPortal:Q9SRT2 SMR:Q9SRT2 EnsemblPlants:AT3G07340.1
GeneID:819922 KEGG:ath:AT3G07340 GeneFarm:2908 TAIR:At3g07340
eggNOG:NOG283912 InParanoid:Q9SRT2 OMA:MENELFM PhylomeDB:Q9SRT2
ProtClustDB:CLSN2684837 Genevestigator:Q9SRT2 Uniprot:Q9SRT2
Length = 456
Score = 165 (63.1 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 39/66 (59%), Positives = 43/66 (65%)
Query: 252 VRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 310
VRARRGQATD HS MK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 258 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 317
Query: 311 VKVLSM 316
V+ LSM
Sbjct: 318 VEFLSM 323
>TAIR|locus:2199221 [details] [associations]
symbol:RSL4 "AT1G27740" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048766 "root hair
initiation" evidence=IMP] [GO:0048765 "root hair cell
differentiation" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009733
GO:GO:0003677 GO:GO:0016049 GO:GO:0003700 GO:GO:0006351
EMBL:AC012375 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY085436
IPI:IPI00523669 PIR:B86402 RefSeq:NP_564293.1 UniGene:At.41015
ProteinModelPortal:Q8LEG1 SMR:Q8LEG1 EnsemblPlants:AT1G27740.1
GeneID:839667 KEGG:ath:AT1G27740 TAIR:At1g27740 eggNOG:NOG244031
HOGENOM:HOG000240244 InParanoid:Q8LEG1 OMA:DESNTNW PhylomeDB:Q8LEG1
ProtClustDB:CLSN2688032 Genevestigator:Q8LEG1 GO:GO:0048766
Uniprot:Q8LEG1
Length = 258
Score = 155 (59.6 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 32/67 (47%), Positives = 41/67 (61%)
Query: 249 KQRVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYVKFLQ 308
K + RA +G ATDP S +K LQ LVPN K D ++ML+E + YVKFLQ
Sbjct: 164 KGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQ 223
Query: 309 LQVKVLS 315
LQ+K+LS
Sbjct: 224 LQIKLLS 230
Score = 38 (18.4 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 9 EMQGISSLLSNGSHEQQSQIHQS 31
E+ G+SSL NG H Q Q H +
Sbjct: 32 ELLGLSSLY-NG-HLHQHQHHNN 52
>UNIPROTKB|Q75M33 [details] [associations]
symbol:P0668H12.5 "BHLH transcription factor" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000142 EMBL:AC084818 EMBL:AC073405 EMBL:HQ858853
EMBL:AK065864 RefSeq:NP_001054390.1 UniGene:Os.23082
EnsemblPlants:LOC_Os05g01256.1 EnsemblPlants:LOC_Os05g01256.2
GeneID:4337537 KEGG:osa:4337537 eggNOG:NOG296531 Uniprot:Q75M33
Length = 339
Score = 156 (60.0 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 38/66 (57%), Positives = 41/66 (62%)
Query: 252 VRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 310
VRARRGQATD HS MK LQ LVP +K T KA MLDEII YV+ LQ Q
Sbjct: 180 VRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQ 239
Query: 311 VKVLSM 316
V+ LSM
Sbjct: 240 VEFLSM 245
Score = 45 (20.9 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 13 ISSLLSNGSHEQQSQIHQSAT 33
+ SL HE + Q+HQS++
Sbjct: 1 MESLCGQLEHEHEQQLHQSSS 21
>UNIPROTKB|Q5N802 [details] [associations]
symbol:P0004D12.24 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008207 eggNOG:NOG283912 EMBL:AP003433 EMBL:HQ858864
EMBL:AK101063 RefSeq:NP_001045188.1 UniGene:Os.5763
EnsemblPlants:LOC_Os01g68700.2 GeneID:4324327 KEGG:osa:4324327
ProtClustDB:CLSN2692207 Uniprot:Q5N802
Length = 481
Score = 165 (63.1 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 40/76 (52%), Positives = 46/76 (60%)
Query: 244 PAQQPKQ--RVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKT-DKASMLDEI 300
P + PK VRARRG+ATD HS MK LQ+LVP NK KA MLDEI
Sbjct: 267 PPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEI 326
Query: 301 IDYVKFLQLQVKVLSM 316
I+YV+ LQ QV+ LSM
Sbjct: 327 INYVQSLQRQVEFLSM 342
Score = 41 (19.5 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 191 TGSLHG-STQPQHFHHLQGGSMP 212
TG+LHG S QP H+ GG P
Sbjct: 51 TGALHGISPQP-HY----GGGTP 68
>UNIPROTKB|Q94LR3 [details] [associations]
symbol:OSJNBa0010C11.7 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC069300 RefSeq:NP_001065353.1
UniGene:Os.27587 IntAct:Q94LR3 STRING:Q94LR3 GeneID:4349351
KEGG:osa:4349351 ProtClustDB:CLSN2714538 Uniprot:Q94LR3
Length = 191
Score = 143 (55.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 28/38 (73%), Positives = 35/38 (92%)
Query: 278 MKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLS 315
MK LQ+LVPN++KTDKASMLDE+IDY+K LQ QV+V+S
Sbjct: 21 MKTLQKLVPNSSKTDKASMLDEVIDYLKQLQAQVQVMS 58
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 150 (57.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 33/68 (48%), Positives = 43/68 (63%)
Query: 249 KQRVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYVKFLQ 308
KQR +R H+ MKALQ+L+PN+NKTDKASMLDE I+Y+K LQ
Sbjct: 84 KQRNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQ 143
Query: 309 LQVKVLSM 316
LQV+ L++
Sbjct: 144 LQVQTLAV 151
>TAIR|locus:2139484 [details] [associations]
symbol:CIB1 "AT4G34530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161585 EMBL:AL023094
HOGENOM:HOG000238007 EMBL:AF488596 EMBL:AK117846 EMBL:AY120741
EMBL:BT005313 IPI:IPI00519970 PIR:T05273 RefSeq:NP_195179.2
UniGene:At.48937 ProteinModelPortal:Q8GY61 SMR:Q8GY61
DIP:DIP-59356N IntAct:Q8GY61 PRIDE:Q8GY61 EnsemblPlants:AT4G34530.1
GeneID:829604 KEGG:ath:AT4G34530 TAIR:At4g34530 eggNOG:NOG251551
InParanoid:Q8GY61 OMA:SGYSHEM PhylomeDB:Q8GY61
ProtClustDB:CLSN2915063 Genevestigator:Q8GY61 Uniprot:Q8GY61
Length = 335
Score = 160 (61.4 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 37/66 (56%), Positives = 43/66 (65%)
Query: 252 VRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 310
VRARRGQATD HS MK LQ+LVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 172 VRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQ 231
Query: 311 VKVLSM 316
++ LSM
Sbjct: 232 IEFLSM 237
>TAIR|locus:505006688 [details] [associations]
symbol:AT5G50915 "AT5G50915" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB017063 EMBL:AF428350 EMBL:AY057549 EMBL:AY113059
EMBL:AY087602 IPI:IPI00536793 RefSeq:NP_568745.1 RefSeq:NP_851163.1
UniGene:At.23601 ProteinModelPortal:Q93W88 SMR:Q93W88
EnsemblPlants:AT5G50915.1 EnsemblPlants:AT5G50915.2 GeneID:835164
KEGG:ath:AT5G50915 TAIR:At5g50915 eggNOG:NOG262059
HOGENOM:HOG000242938 InParanoid:Q93W88 OMA:ISERMRT PhylomeDB:Q93W88
ProtClustDB:CLSN2689980 Genevestigator:Q93W88 Uniprot:Q93W88
Length = 286
Score = 157 (60.3 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 37/66 (56%), Positives = 42/66 (63%)
Query: 252 VRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 310
VRARRGQATD HS M+ LQ LVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQ 195
Query: 311 VKVLSM 316
V+ LSM
Sbjct: 196 VEFLSM 201
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 151 (58.2 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 32/74 (43%), Positives = 46/74 (62%)
Query: 242 NTPAQQPKQRVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEII 301
NT ++ K++ +A RG A+DP S +K LQ LVPN K D ++ML++ +
Sbjct: 123 NT-SKSLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAV 181
Query: 302 DYVKFLQLQVKVLS 315
YVKFLQLQ+K+LS
Sbjct: 182 HYVKFLQLQIKLLS 195
>TAIR|locus:2172209 [details] [associations]
symbol:AT5G62610 "AT5G62610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 EMBL:AB020751 HOGENOM:HOG000238007 EMBL:AY072104
EMBL:AY123023 EMBL:AY084578 EMBL:AF488611 IPI:IPI00518025
RefSeq:NP_201067.1 UniGene:At.24534 UniGene:At.24682
ProteinModelPortal:Q9LV17 SMR:Q9LV17 PaxDb:Q9LV17 PRIDE:Q9LV17
EnsemblPlants:AT5G62610.1 GeneID:836382 KEGG:ath:AT5G62610
GeneFarm:2935 TAIR:At5g62610 eggNOG:NOG269855 InParanoid:Q9LV17
OMA:DDSSKMV PhylomeDB:Q9LV17 ProtClustDB:CLSN2916786
Genevestigator:Q9LV17 Uniprot:Q9LV17
Length = 281
Score = 155 (59.6 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 38/78 (48%), Positives = 47/78 (60%)
Query: 242 NTPAQQPKQ--RVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKT-DKASMLD 298
N P + PK VRARRGQATD HS M ALQ+++P NK KA +LD
Sbjct: 142 NKP-EPPKDYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLD 200
Query: 299 EIIDYVKFLQLQVKVLSM 316
EII+Y++ LQ QV+ LSM
Sbjct: 201 EIINYIQSLQRQVEFLSM 218
>UNIPROTKB|Q8S490 [details] [associations]
symbol:rau1 "Transcription factor RAU1" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF465824
ProteinModelPortal:Q8S490 Gramene:Q8S490 Genevestigator:Q8S490
Uniprot:Q8S490
Length = 150
Score = 138 (53.6 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 43/136 (31%), Positives = 59/136 (43%)
Query: 185 ALYNGFT-GSLHGSTQPQHFHHLQGGSMPGQTFGAPGPVMNQXXXXXXXXXXXXXXXXNT 243
A+ +G+ SL T + S P Q G G + +Q
Sbjct: 1 AMSSGWEESSLMSDTNISGVKRQRDSSEPSQNGGGGGGLAHQFSLPKTSSEMAAIEKFLQ 60
Query: 244 PAQQPKQRVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANK-TDKASMLDEIID 302
++RA+RG AT P S ++ LQELVPN +K T+ A MLD +D
Sbjct: 61 FQDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVD 120
Query: 303 YVKFLQLQVKVLSMSR 318
Y+K LQ QVK L+ SR
Sbjct: 121 YIKDLQKQVKGLNDSR 136
>UNIPROTKB|Q2QMV9 [details] [associations]
symbol:LOC_Os12g39850 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
KEGG:dosa:Os12t0589000-00 OMA:DESEMMA Uniprot:Q2QMV9
Length = 304
Score = 155 (59.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 33/67 (49%), Positives = 41/67 (61%)
Query: 249 KQRVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYVKFLQ 308
K + RA RG ATDP S +K LQ LVPN K D ++ML+E + YVKFLQ
Sbjct: 213 KGKSRAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQ 272
Query: 309 LQVKVLS 315
LQ+K+LS
Sbjct: 273 LQIKLLS 279
>TAIR|locus:2205420 [details] [associations]
symbol:AT1G68920 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AF488584 EMBL:AY128299
EMBL:BT002259 IPI:IPI00536565 IPI:IPI00545990 PIR:G96713
RefSeq:NP_001031255.1 RefSeq:NP_177058.1 RefSeq:NP_849863.2
UniGene:At.28096 ProteinModelPortal:Q9CAA9 SMR:Q9CAA9 STRING:Q9CAA9
EnsemblPlants:AT1G68920.1 EnsemblPlants:AT1G68920.2 GeneID:843225
KEGG:ath:AT1G68920 TAIR:At1g68920 eggNOG:NOG301979
HOGENOM:HOG000238007 InParanoid:Q3E6P7 OMA:MLKGGIF PhylomeDB:Q9CAA9
ProtClustDB:CLSN2682343 Genevestigator:Q9CAA9 Uniprot:Q9CAA9
Length = 486
Score = 159 (61.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 38/66 (57%), Positives = 43/66 (65%)
Query: 252 VRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 310
VRARRGQAT+ HS MK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 303 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 362
Query: 311 VKVLSM 316
V+ LSM
Sbjct: 363 VEFLSM 368
>TAIR|locus:2202867 [details] [associations]
symbol:BPEp "AT1G59640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048446 "petal morphogenesis" evidence=IMP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009753 "response to jasmonic
acid stimulus" evidence=RCA] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0048441 "petal development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AM269753 EMBL:AM269754
EMBL:AC009317 EMBL:BT003964 EMBL:BT005064 EMBL:AY086373
EMBL:AB028232 IPI:IPI00530097 IPI:IPI00531813 PIR:B96620 PIR:T52428
RefSeq:NP_564749.1 RefSeq:NP_849829.1 UniGene:At.455
ProteinModelPortal:Q0JXE7 SMR:Q0JXE7 IntAct:Q0JXE7 STRING:Q0JXE7
PRIDE:Q0JXE7 EnsemblPlants:AT1G59640.2 GeneID:842254
KEGG:ath:AT1G59640 TAIR:At1g59640 eggNOG:NOG296410
InParanoid:Q0JXE7 OMA:RGASPEW PhylomeDB:Q0JXE7
ProtClustDB:CLSN2688917 Genevestigator:Q0JXE7 GO:GO:0048446
Uniprot:Q0JXE7
Length = 343
Score = 156 (60.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 36/66 (54%), Positives = 42/66 (63%)
Query: 252 VRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 310
VRARRGQATD HS MK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 311 VKVLSM 316
V+ LSM
Sbjct: 196 VEFLSM 201
>UNIPROTKB|Q5VR96 [details] [associations]
symbol:P0038C05.31-1 "Os06g0275600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003044 RefSeq:NP_001057380.1 UniGene:Os.32526
EnsemblPlants:LOC_Os06g16400.1 EnsemblPlants:LOC_Os06g16400.2
GeneID:4340749 KEGG:osa:4340749 ProtClustDB:CLSN2697804
Uniprot:Q5VR96
Length = 437
Score = 157 (60.3 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 40/76 (52%), Positives = 47/76 (61%)
Query: 245 AQQPKQ---RVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANK-TDKASMLDEI 300
A PK+ VRARRGQAT+ HS MK LQ+LVP +K T KA MLDEI
Sbjct: 250 AGSPKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEI 309
Query: 301 IDYVKFLQLQVKVLSM 316
I+YV+ LQ QV+ LSM
Sbjct: 310 INYVQSLQRQVEFLSM 325
>UNIPROTKB|Q69JJ6 [details] [associations]
symbol:OSJNBa0026C08.22 "TA1 protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008215
ProtClustDB:CLSN2697804 EMBL:AP006169 EMBL:HQ858863 EMBL:AK121418
RefSeq:NP_001063455.1 UniGene:Os.38400
EnsemblPlants:LOC_Os09g29830.3 GeneID:4347355 KEGG:osa:4347355
Uniprot:Q69JJ6
Length = 428
Score = 155 (59.6 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 37/66 (56%), Positives = 43/66 (65%)
Query: 252 VRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 310
VRARRGQAT+ HS MK LQ+LVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 248 VRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 307
Query: 311 VKVLSM 316
V+ LSM
Sbjct: 308 VEFLSM 313
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 156 (60.0 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 254 ARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 313
++R ++ + H+ M+ALQEL+PN NK DKASMLDE I+Y+K LQLQV++
Sbjct: 339 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQI 398
Query: 314 LSMS 317
+SM+
Sbjct: 399 MSMA 402
>UNIPROTKB|Q84LH4 [details] [associations]
symbol:OSJNBb0011H13.2 "Putative Helix-loop-helix
DNA-binding domain containing protein" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140 EMBL:AC120983
EMBL:AC135956 RefSeq:NP_001051150.1 UniGene:Os.24540
EnsemblPlants:LOC_Os03g51910.1 GeneID:4333984 KEGG:osa:4333984
eggNOG:NOG262475 OMA:SKQMMLS ProtClustDB:CLSN2694257 Uniprot:Q84LH4
Length = 327
Score = 152 (58.6 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 36/66 (54%), Positives = 43/66 (65%)
Query: 252 VRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 310
VRA+RGQAT+ HS MK LQ+LVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 147 VRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQ 206
Query: 311 VKVLSM 316
V+ LSM
Sbjct: 207 VEFLSM 212
>TAIR|locus:2027809 [details] [associations]
symbol:BEE3 "AT1G73830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000090950 ProtClustDB:CLSN2680013 EMBL:AF488585
EMBL:AC012679 EMBL:AK118781 EMBL:BT006055 IPI:IPI00541876
RefSeq:NP_177524.2 UniGene:At.34949 ProteinModelPortal:Q8GWK7
SMR:Q8GWK7 EnsemblPlants:AT1G73830.1 GeneID:843719
KEGG:ath:AT1G73830 TAIR:At1g73830 eggNOG:NOG264296
InParanoid:Q8GWK7 OMA:LENNFHQ PhylomeDB:Q8GWK7
Genevestigator:Q8GWK7 Uniprot:Q8GWK7
Length = 261
Score = 148 (57.2 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 35/66 (53%), Positives = 42/66 (63%)
Query: 252 VRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 310
VRARRGQATD HS +K LQ++VP KT A+MLDEII+YV+ LQ Q
Sbjct: 147 VRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQ 206
Query: 311 VKVLSM 316
V+ LSM
Sbjct: 207 VEFLSM 212
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 151 (58.2 bits), Expect = 5.3e-08, Sum P(3) = 5.3e-08
Identities = 33/74 (44%), Positives = 45/74 (60%)
Query: 244 PAQQPKQRVRA-RRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIID 302
P K R+ +R + + H+ M+ALQEL+PN NK DKASMLDE I+
Sbjct: 297 PGVLRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIE 356
Query: 303 YVKFLQLQVKVLSM 316
Y+K LQLQV+++SM
Sbjct: 357 YLKTLQLQVQMMSM 370
Score = 43 (20.2 bits), Expect = 5.3e-08, Sum P(3) = 5.3e-08
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 385 GKGLCLMPISLATAI 399
G GLC+ P+ L TA+
Sbjct: 371 GTGLCIPPMLLPTAM 385
Score = 40 (19.1 bits), Expect = 5.3e-08, Sum P(3) = 5.3e-08
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 155 LPLSLGNGGDNDIVDVSSF 173
LP S G+GG +++ S F
Sbjct: 128 LPRSSGSGGGEGVMNFSLF 146
>TAIR|locus:2118934 [details] [associations]
symbol:RSL2 "AT4G33880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0048766 "root hair initiation"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0003677 GO:GO:0016049 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL031032
EMBL:AL161584 HOGENOM:HOG000240244 GO:GO:0048766 EMBL:AF488616
EMBL:BT003137 EMBL:AK228110 IPI:IPI00526320 PIR:T05216
RefSeq:NP_195114.2 UniGene:At.31542 ProteinModelPortal:Q84WK0
SMR:Q84WK0 EnsemblPlants:AT4G33880.1 GeneID:829531
KEGG:ath:AT4G33880 TAIR:At4g33880 eggNOG:NOG318365
InParanoid:Q84WK0 OMA:TINTNSY PhylomeDB:Q84WK0
ProtClustDB:CLSN2680247 Genevestigator:Q84WK0 Uniprot:Q84WK0
Length = 352
Score = 151 (58.2 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 31/65 (47%), Positives = 40/65 (61%)
Query: 251 RVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYVKFLQLQ 310
+ RA RG ATDP S ++ LQ LVPN K D ++ML+E + YVKFLQLQ
Sbjct: 265 KTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQ 324
Query: 311 VKVLS 315
+K+LS
Sbjct: 325 IKLLS 329
>TAIR|locus:2032990 [details] [associations]
symbol:CES "AT1G25330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:2000488 "positive regulation of brassinosteroid biosynthetic
process" evidence=IMP] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG264296 EMBL:AC079374 EMBL:DQ446289 EMBL:DQ652859
EMBL:AK175757 EMBL:AY088885 EMBL:AF488607 IPI:IPI00519962
PIR:B86383 PIR:D86381 RefSeq:NP_564229.1 UniGene:At.48236
UniGene:At.63980 ProteinModelPortal:A4D998 SMR:A4D998
EnsemblPlants:AT1G25330.1 GeneID:839117 KEGG:ath:AT1G25330
GeneFarm:2907 TAIR:At1g25330 InParanoid:A4D998 PhylomeDB:A4D998
Genevestigator:A4D998 GO:GO:2000488 Uniprot:A4D998
Length = 223
Score = 144 (55.7 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 36/74 (48%), Positives = 43/74 (58%)
Query: 246 QQPKQ--RVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKT-DKASMLDEIID 302
Q+PK VRA+RGQATD HS +K LQ+LVP K A MLD IID
Sbjct: 96 QKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIID 155
Query: 303 YVKFLQLQVKVLSM 316
YV+ LQ Q++ LSM
Sbjct: 156 YVRSLQNQIEFLSM 169
>UNIPROTKB|Q6ZCV8 [details] [associations]
symbol:P0028A08.20 "Os08g0487700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000145 EMBL:AP004557 RefSeq:NP_001062102.1 UniGene:Os.60678
EnsemblPlants:LOC_Os08g38080.1 GeneID:4345892 KEGG:osa:4345892
eggNOG:NOG275480 Uniprot:Q6ZCV8
Length = 365
Score = 151 (58.2 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 36/66 (54%), Positives = 43/66 (65%)
Query: 252 VRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 310
VRAR+GQAT+ HS MK LQ+LVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 176 VRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQRQ 235
Query: 311 VKVLSM 316
V+ LSM
Sbjct: 236 VEFLSM 241
>TAIR|locus:2028804 [details] [associations]
symbol:CIB5 "AT1G26260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009911 "positive regulation of flower development"
evidence=IGI] [GO:0048513 "organ development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC079829 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238007
EMBL:AK117355 EMBL:BT005334 EMBL:AJ630483 EMBL:AY568655
EMBL:AF488608 IPI:IPI00529982 IPI:IPI00547855 PIR:H86388
RefSeq:NP_001031093.1 RefSeq:NP_173950.1 RefSeq:NP_973913.1
UniGene:At.41276 ProteinModelPortal:Q9C670 SMR:Q9C670 IntAct:Q9C670
STRING:Q9C670 EnsemblPlants:AT1G26260.1 EnsemblPlants:AT1G26260.2
GeneID:839167 KEGG:ath:AT1G26260 TAIR:At1g26260 eggNOG:NOG284637
InParanoid:Q9C670 OMA:ETHGYES PhylomeDB:Q9C670
ProtClustDB:CLSN2682645 Genevestigator:Q9C670 Uniprot:Q9C670
Length = 390
Score = 151 (58.2 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 35/66 (53%), Positives = 43/66 (65%)
Query: 252 VRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 310
+RARRGQAT+ HS MK LQ+LVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 223 MRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQ 282
Query: 311 VKVLSM 316
++ LSM
Sbjct: 283 IEFLSM 288
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 152 (58.6 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 255 RRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 314
+R +A + H+ MKALQEL+P NK+DKASMLDE I+Y+K LQLQ++++
Sbjct: 281 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 340
Query: 315 SM 316
SM
Sbjct: 341 SM 342
>TAIR|locus:2053766 [details] [associations]
symbol:AT2G42300 "AT2G42300" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005956 EMBL:AY065411 EMBL:AY096521 EMBL:AK175584
EMBL:AK176019 EMBL:AK176634 EMBL:AF488583 IPI:IPI00532521
PIR:C84852 RefSeq:NP_850368.1 UniGene:At.28495
ProteinModelPortal:Q8VZ02 SMR:Q8VZ02 EnsemblPlants:AT2G42300.1
GeneID:818831 KEGG:ath:AT2G42300 TAIR:At2g42300 eggNOG:NOG301522
HOGENOM:HOG000037005 InParanoid:Q8VZ02 OMA:PEWGREE PhylomeDB:Q8VZ02
ProtClustDB:CLSN2680198 Genevestigator:Q8VZ02 Uniprot:Q8VZ02
Length = 327
Score = 148 (57.2 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 36/70 (51%), Positives = 43/70 (61%)
Query: 248 PKQRVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTD-KASMLDEIIDYVKF 306
P VRARRGQATD HS MK LQELVP +K A +LDEII++V+
Sbjct: 181 PYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQT 240
Query: 307 LQLQVKVLSM 316
LQ QV++LSM
Sbjct: 241 LQRQVEMLSM 250
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 150 (57.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 32/72 (44%), Positives = 48/72 (66%)
Query: 247 QPKQRVRA-RRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYVK 305
+P +R A RR +A + H+ ++ALQELVP+ NKTDKAS+LDE I+Y+K
Sbjct: 216 RPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLK 275
Query: 306 FLQLQVKVLSMS 317
LQ+QV+++ M+
Sbjct: 276 SLQMQVQIMWMT 287
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 149 (57.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 255 RRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 314
RR +A + H+ MKALQEL+P+ +KTDKAS+LDE IDY+K LQLQ++V+
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM 313
Query: 315 SM 316
M
Sbjct: 314 WM 315
>TAIR|locus:2014144 [details] [associations]
symbol:BEE1 "BR enhanced expression 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC013354
EMBL:AY138253 EMBL:AF488579 EMBL:AK117269 EMBL:BT005268
IPI:IPI00539846 RefSeq:NP_173276.2 UniGene:At.46141
ProteinModelPortal:Q8GZ13 SMR:Q8GZ13 IntAct:Q8GZ13
EnsemblPlants:AT1G18400.1 GeneID:838421 KEGG:ath:AT1G18400
TAIR:At1g18400 eggNOG:euNOG17991 HOGENOM:HOG000090950
InParanoid:Q8GZ13 PhylomeDB:Q8GZ13 ProtClustDB:CLSN2680013
Genevestigator:Q8GZ13 Uniprot:Q8GZ13
Length = 260
Score = 143 (55.4 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 43/107 (40%), Positives = 53/107 (49%)
Query: 252 VRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 310
VRARRGQATD HS ++ LQ++VP K A+MLDEII+YV+ LQ Q
Sbjct: 145 VRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQ 204
Query: 311 VKVLSMSRXXXXXXXXXXXXDMSSEVRGGDCIQ-ANGRNP--NGAQT 354
V+ LSM D +SE D +Q A R G QT
Sbjct: 205 VEFLSMK-----LTAASSFYDFNSETDAVDSMQRAKARETVEMGRQT 246
>UNIPROTKB|Q8GZV6 [details] [associations]
symbol:OJ1017C11.10 "Putative uncharacterized protein
OJ1017C11.10" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR001810
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50181 PROSITE:PS50888
SMART:SM00256 SMART:SM00353 GO:GO:0005634 SUPFAM:SSF81383
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR019955
PROSITE:PS50053 EMBL:AC135157 ProteinModelPortal:Q8GZV6
Gramene:Q8GZV6 Uniprot:Q8GZV6
Length = 776
Score = 157 (60.3 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 37/66 (56%), Positives = 43/66 (65%)
Query: 252 VRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 310
VRA+RGQAT+ HS MK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 628 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 687
Query: 311 VKVLSM 316
V+ LSM
Sbjct: 688 VEFLSM 693
Score = 38 (18.4 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 20 GSHEQQSQIHQSATFDPTSQDDFLEQMLSSLP 51
GS Q Q S +F P S L +++ +LP
Sbjct: 217 GSCLQLPQNWASGSFVPVSMKYTLPELVEALP 248
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 146 (56.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 31/67 (46%), Positives = 42/67 (62%)
Query: 249 KQRVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYVKFLQ 308
K V +R +A H+ MK LQ+LVPN++KTDKASMLDE+I+Y+K LQ
Sbjct: 204 KSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQ 263
Query: 309 LQVKVLS 315
QV ++S
Sbjct: 264 AQVSMMS 270
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 145 (56.1 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 32/75 (42%), Positives = 47/75 (62%)
Query: 243 TPAQQPKQRVRA-RRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEII 301
T + QR + RR +A + H+ MKALQEL+P+ ++TDKAS+LDE I
Sbjct: 240 TMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAI 299
Query: 302 DYVKFLQLQVKVLSM 316
DY+K LQ+Q++V+ M
Sbjct: 300 DYLKSLQMQLQVMWM 314
>TAIR|locus:4010713915 [details] [associations]
symbol:AT4G28811 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
HOGENOM:HOG000240264 EMBL:AJ519811 IPI:IPI00518617 PIR:H85335
PIR:T04518 RefSeq:NP_001078462.1 UniGene:At.46149
ProteinModelPortal:Q8GT73 SMR:Q8GT73 PRIDE:Q8GT73
EnsemblPlants:AT4G28811.1 GeneID:5008170 KEGG:ath:AT4G28811
TAIR:At4g28811 eggNOG:NOG314238 PhylomeDB:Q8GT73
ProtClustDB:CLSN2699107 Genevestigator:Q8GT73 Uniprot:Q8GT73
Length = 544
Score = 144 (55.7 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 255 RRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 314
+R +A D H+ MK LQEL+P KTDK SML+++I+YVK LQLQ++++
Sbjct: 354 KRSRAADMHNLSERRRRERINERMKTLQELLPRCRKTDKVSMLEDVIEYVKSLQLQIQMM 413
Query: 315 SM 316
SM
Sbjct: 414 SM 415
>UNIPROTKB|Q6ZFY4 [details] [associations]
symbol:OJ1311_H06.19 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003983
EMBL:AP004161 Uniprot:Q6ZFY4
Length = 298
Score = 137 (53.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 36/109 (33%), Positives = 48/109 (44%)
Query: 208 GGSMPGQTFGAPGPVMNQXXXXXXXXXXXXXXXXNTPAQQPKQRVRARRGQAT-DPHSXX 266
GG P + AP P +Q A + + ++ T DP S
Sbjct: 152 GGVSPERAAPAPAPRGSQKRAHAESSQAMSPSKKQCGAGRKAGKAKSAPTTPTKDPQSLA 211
Query: 267 XXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLS 315
++ LQELVPN K D +ML++ I YVKFLQLQVKVL+
Sbjct: 212 AKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVLA 260
>UNIPROTKB|Q6AV35 [details] [associations]
symbol:OSJNBa0063J18.7 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140
EMBL:AC107206 RefSeq:NP_001050667.1 UniGene:Os.79759
EnsemblPlants:LOC_Os03g42100.1 GeneID:4333457 KEGG:osa:4333457
eggNOG:NOG300710 OMA:CTSENDS ProtClustDB:CLSN2694086 Uniprot:Q6AV35
Length = 310
Score = 135 (52.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 31/69 (44%), Positives = 40/69 (57%)
Query: 249 KQRVRARRGQ--ATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYVKF 306
K +A+ G ATDP S +K LQ LVPN K D ++ML+E + YVKF
Sbjct: 216 KSNGKAQSGHRSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAMHYVKF 275
Query: 307 LQLQVKVLS 315
LQLQ+K+LS
Sbjct: 276 LQLQIKLLS 284
>TAIR|locus:2141573 [details] [associations]
symbol:FBH2 "AT4G09180" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL161514 HOGENOM:HOG000095218 ProtClustDB:CLSN2679906
EMBL:AF488613 EMBL:BT010423 EMBL:AK230384 IPI:IPI00545642
PIR:B85093 RefSeq:NP_192657.1 UniGene:At.33710
ProteinModelPortal:Q9M0R0 SMR:Q9M0R0 PaxDb:Q9M0R0 PRIDE:Q9M0R0
EnsemblPlants:AT4G09180.1 GeneID:826499 KEGG:ath:AT4G09180
TAIR:At4g09180 eggNOG:NOG277140 InParanoid:Q9M0R0 OMA:MENLMED
PhylomeDB:Q9M0R0 Genevestigator:Q9M0R0 Uniprot:Q9M0R0
Length = 262
Score = 133 (51.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 30/66 (45%), Positives = 41/66 (62%)
Query: 251 RVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 309
RVRA+RG AT P S ++ LQELVPN +K T+ A ML+E ++YVK LQ
Sbjct: 183 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQR 242
Query: 310 QVKVLS 315
Q++ L+
Sbjct: 243 QIQELT 248
>TAIR|locus:2028957 [details] [associations]
symbol:RHD6 "AT1G66470" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0048766 "root
hair initiation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048766 EMBL:AC074025
EMBL:AY128310 EMBL:BT006320 EMBL:AF488615 IPI:IPI00529158
PIR:C96690 RefSeq:NP_176820.1 UniGene:At.35765
ProteinModelPortal:Q9C707 SMR:Q9C707 IntAct:Q9C707
EnsemblPlants:AT1G66470.1 GeneID:842965 KEGG:ath:AT1G66470
TAIR:At1g66470 eggNOG:NOG301765 HOGENOM:HOG000006063
InParanoid:Q9C707 OMA:HESFPPP PhylomeDB:Q9C707
ProtClustDB:CLSN2681768 Genevestigator:Q9C707 Uniprot:Q9C707
Length = 298
Score = 128 (50.1 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 27/55 (49%), Positives = 33/55 (60%)
Query: 261 DPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLS 315
DP S +K LQELVPN K D +ML++ I YVKFLQ+QVKVL+
Sbjct: 204 DPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVLA 258
Score = 45 (20.9 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 7 GGEMQGISSLLSNGSHEQQSQIHQSATFDPTSQD 40
GG SS N H+Q HQ F P+ +D
Sbjct: 42 GGGGSASSSSTMNSDHQQ----HQGFVFYPSGED 71
>TAIR|locus:2008693 [details] [associations]
symbol:FBH1 "AT1G35460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488612 EMBL:AC023064 EMBL:AF411791 EMBL:AY093794
IPI:IPI00538359 PIR:F86475 RefSeq:NP_174776.1 UniGene:At.18017
ProteinModelPortal:Q9C8P8 SMR:Q9C8P8 PRIDE:Q9C8P8
EnsemblPlants:AT1G35460.1 GeneID:840438 KEGG:ath:AT1G35460
TAIR:At1g35460 eggNOG:NOG263612 HOGENOM:HOG000095218
InParanoid:Q9C8P8 OMA:NLCLTEL PhylomeDB:Q9C8P8
ProtClustDB:CLSN2679906 Genevestigator:Q9C8P8 Uniprot:Q9C8P8
Length = 259
Score = 132 (51.5 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 30/66 (45%), Positives = 41/66 (62%)
Query: 251 RVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 309
RVRA+RG AT P S ++ LQELVPN +K T+ A ML+E ++YVK LQ
Sbjct: 180 RVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQS 239
Query: 310 QVKVLS 315
Q++ L+
Sbjct: 240 QIQELT 245
>TAIR|locus:2059979 [details] [associations]
symbol:FBH4 "AT2G42280" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0046685
"response to arsenic-containing substance" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC002561 GO:GO:0048573
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG312535
HOGENOM:HOG000242890 EMBL:BT015339 EMBL:BT015712 EMBL:AK228981
IPI:IPI00530686 IPI:IPI00538142 PIR:T00937 RefSeq:NP_181757.2
RefSeq:NP_973670.1 UniGene:At.12448 UniGene:At.43726
ProteinModelPortal:Q66GR3 SMR:Q66GR3 PRIDE:Q66GR3
EnsemblPlants:AT2G42280.1 GeneID:818829 KEGG:ath:AT2G42280
TAIR:At2g42280 InParanoid:Q66GR3 OMA:NDNRANC PhylomeDB:Q66GR3
ProtClustDB:CLSN2681218 Genevestigator:Q66GR3 Uniprot:Q66GR3
Length = 359
Score = 135 (52.6 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 30/69 (43%), Positives = 42/69 (60%)
Query: 251 RVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 309
++RA+RG AT P S M+ LQELVPN +K T+ + MLD +DY+K LQ
Sbjct: 278 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQR 337
Query: 310 QVKVLSMSR 318
Q K+L+ +R
Sbjct: 338 QYKILNDNR 346
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 139 (54.0 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 28/75 (37%), Positives = 43/75 (57%)
Query: 242 NTPAQQPKQRVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEII 301
N ++ + ++R +A H MKALQEL+P KTD++SMLD++I
Sbjct: 261 NQGTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVI 320
Query: 302 DYVKFLQLQVKVLSM 316
+YVK LQ Q+++ SM
Sbjct: 321 EYVKSLQSQIQMFSM 335
Score = 37 (18.1 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 83 DLSDETAPSTTQENNV 98
D++DE T +E NV
Sbjct: 244 DITDERKRKTREETNV 259
>TAIR|locus:2156015 [details] [associations]
symbol:RSL1 "AT5G37800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000006063 ProtClustDB:CLSN2681768 EMBL:AB016873
IPI:IPI00523734 RefSeq:NP_198596.1 UniGene:At.55195
ProteinModelPortal:Q9FJ00 SMR:Q9FJ00 EnsemblPlants:AT5G37800.1
GeneID:833758 KEGG:ath:AT5G37800 TAIR:At5g37800 eggNOG:NOG303056
InParanoid:Q9FJ00 OMA:MDFNASS PhylomeDB:Q9FJ00
Genevestigator:Q9FJ00 Uniprot:Q9FJ00
Length = 307
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 35/97 (36%), Positives = 46/97 (47%)
Query: 261 DPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRXX 320
DP S +K LQELVPN K D +ML++ I YVKFLQ+QVKVL+
Sbjct: 210 DPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVLAADEFW 269
Query: 321 XXXXXXXXXXDMSSEVRGGDCIQANG-RNPNGAQTTS 356
D+S D I ++ R+ N + TS
Sbjct: 270 PAQGGKAP--DISQVKEAIDAILSSSQRDSNSTRETS 304
>UNIPROTKB|Q9ASJ3 [details] [associations]
symbol:P0439B06.24 "Putative uncharacterized protein
P0439B06.24" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP002882 UniGene:Os.30617
ProteinModelPortal:Q9ASJ3 Gramene:Q9ASJ3 OMA:KAITYVK
ProtClustDB:CLSN2918925 Uniprot:Q9ASJ3
Length = 294
Score = 127 (49.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 29/74 (39%), Positives = 40/74 (54%)
Query: 242 NTPAQQPKQRVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEII 301
++P+ P + Q P S +K LQ+LVPN K D +ML++ I
Sbjct: 191 SSPSPSPSPSPSPNKEQ---PQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAI 247
Query: 302 DYVKFLQLQVKVLS 315
+YVKFLQLQVKVL+
Sbjct: 248 NYVKFLQLQVKVLA 261
>TAIR|locus:2026037 [details] [associations]
symbol:FBH3 "AT1G51140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048573 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC079828 EMBL:AY034941 EMBL:AY063120
IPI:IPI00519239 PIR:H96548 RefSeq:NP_564583.1 UniGene:At.19155
ProteinModelPortal:Q9C690 SMR:Q9C690 PaxDb:Q9C690 PRIDE:Q9C690
EnsemblPlants:AT1G51140.1 GeneID:841537 KEGG:ath:AT1G51140
TAIR:At1g51140 eggNOG:NOG312535 HOGENOM:HOG000242890
InParanoid:Q9C690 OMA:TKDEDSA PhylomeDB:Q9C690
ProtClustDB:CLSN2917227 Genevestigator:Q9C690 Uniprot:Q9C690
Length = 379
Score = 129 (50.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 30/69 (43%), Positives = 40/69 (57%)
Query: 251 RVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNAN-KTDKASMLDEIIDYVKFLQL 309
++RA+RG AT P S M+ LQ+LVPN + +T+ A MLD + Y+K LQ
Sbjct: 303 KIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQE 362
Query: 310 QVKVLSMSR 318
QVK L SR
Sbjct: 363 QVKALEESR 371
>TAIR|locus:2115683 [details] [associations]
symbol:AT4G05170 "AT4G05170" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 EMBL:AL161503 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000095220 EMBL:BT015446 IPI:IPI00532427 IPI:IPI01019413
PIR:A85065 RefSeq:NP_192426.2 UniGene:At.51015
ProteinModelPortal:Q9M0X8 SMR:Q9M0X8 DNASU:825865 GeneID:825865
KEGG:ath:AT4G05170 TAIR:At4g05170 eggNOG:NOG256664 PhylomeDB:Q9M0X8
ArrayExpress:Q9M0X8 Genevestigator:Q9M0X8 Uniprot:Q9M0X8
Length = 298
Score = 103 (41.3 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 280 ALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLS 315
ALQ+LV KTD AS+L+E ++Y+KFLQ QV VLS
Sbjct: 185 ALQQLVSPFGKTDTASVLNEAVEYIKFLQEQVTVLS 220
Score = 65 (27.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 372 MEEDMGSAMQY--LQGKGLCLMPISLATAISTA 402
+EED S +Y L +GLCLMPIS + ++ A
Sbjct: 247 VEEDECSPRRYVDLSSRGLCLMPISASYPVAAA 279
>UNIPROTKB|Q2R0R9 [details] [associations]
symbol:LOC_Os11g41640 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240244 KEGG:dosa:Os11t0634700-00 Gramene:Q2R0R9
OMA:SLYAKRR Uniprot:Q2R0R9
Length = 246
Score = 120 (47.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 22/38 (57%), Positives = 31/38 (81%)
Query: 278 MKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLS 315
++ LQ+LVPN K D ++ML+E + YVKFLQLQ+K+LS
Sbjct: 181 LRILQQLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS 218
Score = 41 (19.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 179 GDGSVQALYNGFTGSLHGSTQPQHFHHLQ 207
G G+VQ ++ TG+ +HF Q
Sbjct: 68 GFGTVQLMHQVITGNKRMFPMDEHFEQQQ 96
>TAIR|locus:2041369 [details] [associations]
symbol:PIL1 "phytochrome interacting factor 3-like 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0010017 "red or far-red light
signaling pathway" evidence=IEP;IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC004411 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0010017 GO:GO:0009641 HOGENOM:HOG000115543
ProtClustDB:CLSN2680935 EMBL:AB090873 EMBL:AY219127 EMBL:AY954840
IPI:IPI00545843 PIR:T02190 RefSeq:NP_182220.2 UniGene:At.36425
ProteinModelPortal:Q8L5W8 SMR:Q8L5W8 IntAct:Q8L5W8 STRING:Q8L5W8
PRIDE:Q8L5W8 EnsemblPlants:AT2G46970.1 GeneID:819311
KEGG:ath:AT2G46970 TAIR:At2g46970 eggNOG:NOG291407
InParanoid:Q8L5W8 OMA:MELVCEN PhylomeDB:Q8L5W8
Genevestigator:Q8L5W8 Uniprot:Q8L5W8
Length = 416
Score = 130 (50.8 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 255 RRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 314
+R ++T+ H M+ALQ+L+PN K DKAS+LDE I Y++ LQLQV+++
Sbjct: 226 KRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMM 285
Query: 315 SM 316
SM
Sbjct: 286 SM 287
Score = 39 (18.8 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 163 GDNDIVDVSSFKSQQGGDGSVQ 184
GD +V VS K QQ + + Q
Sbjct: 82 GDTQVVPVSQSKPQQDKETNEQ 103
>UNIPROTKB|Q8W5G3 [details] [associations]
symbol:OSJNBa0002J24.23 "Helix-loop-helix DNA-binding
domain containing protein, expressed" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000140 HOGENOM:HOG000240244 EMBL:AC090713
EnsemblPlants:LOC_Os03g55550.1 eggNOG:NOG237829 OMA:WIWERRR
Uniprot:Q8W5G3
Length = 310
Score = 126 (49.4 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 28/63 (44%), Positives = 37/63 (58%)
Query: 251 RVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYVKFLQLQ 310
+V ARR AT S ++ LQ+LVPN K D ++ML+E + YVKFLQLQ
Sbjct: 209 KVPARRRSATIAQSLYARRRRERINGRLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQ 268
Query: 311 VKV 313
+KV
Sbjct: 269 IKV 271
>UNIPROTKB|Q2QQ32 [details] [associations]
symbol:LOC_Os12g32400 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
eggNOG:NOG284967 Uniprot:Q2QQ32
Length = 198
Score = 118 (46.6 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 278 MKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLS 315
++ LQEL+PN K D ++ML+E I YVKFL LQ+K+LS
Sbjct: 134 LRILQELIPNGTKVDISTMLEEAIQYVKFLHLQIKLLS 171
>UNIPROTKB|Q6Z9R3 [details] [associations]
symbol:P0461F06.33 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000145
eggNOG:NOG315110 EMBL:AP004693 EnsemblPlants:LOC_Os08g36740.1
OMA:SAMREMI Uniprot:Q6Z9R3
Length = 246
Score = 118 (46.6 bits), Expect = 0.00013, P = 0.00013
Identities = 31/68 (45%), Positives = 37/68 (54%)
Query: 248 PKQR-VRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYVKF 306
PK+R VR +TDP S ++ LQ LVP K D ASMLDE I YVKF
Sbjct: 150 PKRRNVRI----STDPQSVAARMRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 205
Query: 307 LQLQVKVL 314
L+ QV+ L
Sbjct: 206 LKTQVQSL 213
>TAIR|locus:2144791 [details] [associations]
symbol:HEC3 "AT5G09750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB020752
EMBL:AL353994 GO:GO:0048462 GO:GO:0010500 IPI:IPI00522404
PIR:T49923 RefSeq:NP_196537.1 UniGene:At.65500
ProteinModelPortal:Q9LXD8 SMR:Q9LXD8 IntAct:Q9LXD8 STRING:Q9LXD8
EnsemblPlants:AT5G09750.1 GeneID:830835 KEGG:ath:AT5G09750
TAIR:At5g09750 eggNOG:NOG238444 HOGENOM:HOG000210013
InParanoid:Q9LXD8 OMA:NDPIGMA ProtClustDB:CLSN2916890
Genevestigator:Q9LXD8 Uniprot:Q9LXD8
Length = 224
Score = 116 (45.9 bits), Expect = 0.00016, P = 0.00016
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 246 QQPKQR-VRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYV 304
++PK+R VR + DP S ++ LQ LVP K D ASMLDE I YV
Sbjct: 116 KKPKRRNVRI----SDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYV 171
Query: 305 KFLQLQVKVLS 315
KFL+ Q+++L+
Sbjct: 172 KFLKRQIRLLN 182
>UNIPROTKB|Q7XT55 [details] [associations]
symbol:OSJNBa0084K20.3 "OSJNBa0076N16.1 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000141 EMBL:AL606613 EMBL:AL731617 Uniprot:Q7XT55
Length = 218
Score = 115 (45.5 bits), Expect = 0.00019, P = 0.00019
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 251 RVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 309
RVRA+RG AT P S ++ LQ LVPN +K T + MLD +D++K LQ
Sbjct: 133 RVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQS 192
Query: 310 QVKVL 314
Q++ L
Sbjct: 193 QLQTL 197
>TAIR|locus:2204898 [details] [associations]
symbol:HFR1 "AT1G02340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009585 "red, far-red light
phototransduction" evidence=TAS] [GO:0009642 "response to light
intensity" evidence=IEP] [GO:0009785 "blue light signaling pathway"
evidence=TAS] [GO:0003712 "transcription cofactor activity"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009738
"abscisic acid mediated signaling pathway" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003712
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC064879
GO:GO:0009642 GO:GO:0009785 EMBL:AF288287 EMBL:AF324245
EMBL:AF323182 EMBL:AK117248 IPI:IPI00545685 PIR:G86153
RefSeq:NP_563650.1 UniGene:At.24795 ProteinModelPortal:Q9FE22
SMR:Q9FE22 IntAct:Q9FE22 STRING:Q9FE22 PRIDE:Q9FE22
EnsemblPlants:AT1G02340.1 GeneID:839300 KEGG:ath:AT1G02340
TAIR:At1g02340 eggNOG:NOG274868 HOGENOM:HOG000112891 OMA:FSSHAMR
PhylomeDB:Q9FE22 ProtClustDB:CLSN2916946 Genevestigator:Q9FE22
GermOnline:AT1G02340 Uniprot:Q9FE22
Length = 292
Score = 118 (46.6 bits), Expect = 0.00020, P = 0.00020
Identities = 22/38 (57%), Positives = 33/38 (86%)
Query: 278 MKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLS 315
M+ LQ+LVPN +KTDK S+LD+ I+Y+K LQLQ++++S
Sbjct: 154 MRKLQQLVPNCHKTDKVSVLDKTIEYMKNLQLQLQMMS 191
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 122 (48.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 251 RVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYVKFLQLQ 310
R RRG+A H+ M+ LQ+L+P A+K DK S+LD++I+++K LQ Q
Sbjct: 159 RSNGRRGRAAAIHNESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQ 218
Query: 311 VKVLSM 316
V+ +S+
Sbjct: 219 VQFMSL 224
Score = 37 (18.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 19 NGSHEQQSQIHQSATFDPT 37
NG +S +HQ+A P+
Sbjct: 40 NGCETLESVVHQAALQQPS 58
>UNIPROTKB|Q67TR8 [details] [associations]
symbol:B1342C04.6 "Basic helix-loop-helix (BHLH)-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP005655 EMBL:AP006057
EMBL:AK060477 EMBL:AK070458 RefSeq:NP_001063357.1 UniGene:Os.51063
EnsemblPlants:LOC_Os09g28210.1 GeneID:4347252 KEGG:osa:4347252
OMA:AYPAFHA ProtClustDB:CLSN2697769 Uniprot:Q67TR8
Length = 236
Score = 115 (45.5 bits), Expect = 0.00025, P = 0.00025
Identities = 43/139 (30%), Positives = 54/139 (38%)
Query: 181 GSVQALYNGFTGSLHGSTQPQHFHHLQGG-SMPGQTFGAPGPVMNQXXXXXXXXXXXXXX 239
G Q YN + +G+ H L S PG GAP +
Sbjct: 69 GGYQDQYNSMPAT-YGAGAG--VHQLDFAMSSPGSDSGAPQGSSSSSSSEAMREMIFHIA 125
Query: 240 XXNTPAQQPKQRVRA--RRGQ--ATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKAS 295
P + + VR RR + DP S ++ LQ LVP K D AS
Sbjct: 126 ALQ-PVEIDPEAVRPPKRRNVRISKDPQSVAARLRRERISERIRILQRLVPGGTKMDTAS 184
Query: 296 MLDEIIDYVKFLQLQVKVL 314
MLDE I YVKFL+ QV+ L
Sbjct: 185 MLDEAIHYVKFLKSQVQSL 203
>TAIR|locus:2076581 [details] [associations]
symbol:AT3G57800 "AT3G57800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL049660 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000037005 ProtClustDB:CLSN2680198
EMBL:AF488593 EMBL:AL132977 EMBL:AY139773 EMBL:BT003037
EMBL:AY085849 IPI:IPI00532305 IPI:IPI00535946 PIR:T46002
RefSeq:NP_567057.2 RefSeq:NP_850745.1 UniGene:At.34797
ProteinModelPortal:Q3EAI1 EnsemblPlants:AT3G57800.1 GeneID:825530
KEGG:ath:AT3G57800 TAIR:At3g57800 eggNOG:NOG254513
InParanoid:Q3EAI1 OMA:MVASANL PhylomeDB:Q3EAI1
Genevestigator:Q3EAI1 Uniprot:Q3EAI1
Length = 426
Score = 99 (39.9 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 24/46 (52%), Positives = 25/46 (54%)
Query: 248 PKQRVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANK-TD 292
P VRARRGQATD HS MK LQELVP +K TD
Sbjct: 200 PYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGTD 245
Score = 63 (27.2 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 14/23 (60%), Positives = 20/23 (86%)
Query: 294 ASMLDEIIDYVKFLQLQVKVLSM 316
A +LDEII++V+ LQ QV++LSM
Sbjct: 294 ALVLDEIINHVQSLQRQVEMLSM 316
>UNIPROTKB|Q8S0N2 [details] [associations]
symbol:P0692C11.41-1 "BHLH transcription factor-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 EMBL:AP003381 EMBL:AP003273 EMBL:AK106119
RefSeq:NP_001044022.1 UniGene:Os.25546 GeneID:4327679
KEGG:osa:4327679 eggNOG:NOG254276 OMA:EPDMEAM
ProtClustDB:CLSN2919059 Uniprot:Q8S0N2
Length = 393
Score = 118 (46.6 bits), Expect = 0.00035, P = 0.00035
Identities = 42/136 (30%), Positives = 56/136 (41%)
Query: 181 GSVQALYNGFTG--SLHGSTQPQHFHHLQGGSMPGQTFGAPGPVMNQXXXXXXXXXXXXX 238
G+V A T S+ QP H HH G + G + M Q
Sbjct: 207 GAVAAKRRASTSATSITFGHQPHH-HHA-GATTAG--YEPDMEAMAQVKEMIYRAAAMRP 262
Query: 239 XXXNTPAQQPKQRVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLD 298
T A K R + R ++DP + ++ LQ+LVP NK D ASMLD
Sbjct: 263 VHLGTEAAADKPRRKNVR-ISSDPQTVAARLRRERVSDRLRVLQKLVPGGNKMDTASMLD 321
Query: 299 EIIDYVKFLQLQVKVL 314
E Y+KFL+ QV+ L
Sbjct: 322 EAASYLKFLKSQVQKL 337
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 116 (45.9 bits), Expect = 0.00036, P = 0.00036
Identities = 21/57 (36%), Positives = 35/57 (61%)
Query: 255 RRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYVKFLQLQV 311
+R +A + H+ MK LQ+L+P NK+ K SML+++I+YVK L++Q+
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSLEMQI 203
>UNIPROTKB|Q651K2 [details] [associations]
symbol:B1089G05.30 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CM000143 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005967 EnsemblPlants:LOC_Os06g30090.1 Uniprot:Q651K2
Length = 294
Score = 115 (45.5 bits), Expect = 0.00043, P = 0.00043
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 253 RARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVK 312
+ +R + S ++ALQELVP+ K D +MLD I YVKF+Q+Q++
Sbjct: 190 KKQRANNKETQSSAAKSRRERISERLRALQELVPSGGKVDMVTMLDRAISYVKFMQMQLR 249
Query: 313 VL 314
VL
Sbjct: 250 VL 251
>TAIR|locus:2045263 [details] [associations]
symbol:AT2G31730 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009723 "response to
ethylene stimulus" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 EMBL:CP002685 GO:GO:0003700
GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240890 OMA:SKGLCLV EMBL:AJ576041 IPI:IPI00539360
RefSeq:NP_180732.3 UniGene:At.38180 ProteinModelPortal:Q7XJU1
SMR:Q7XJU1 DNASU:817730 EnsemblPlants:AT2G31730.1 GeneID:817730
KEGG:ath:AT2G31730 TAIR:At2g31730 InParanoid:Q7XJU1
PhylomeDB:Q7XJU1 ProtClustDB:CLSN2687695 Genevestigator:Q7XJU1
Uniprot:Q7XJU1
Length = 153
Score = 94 (38.1 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 22/38 (57%), Positives = 28/38 (73%)
Query: 278 MKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLS 315
+ ALQ+LV KTD AS+L E + Y++FLQ QVKVLS
Sbjct: 49 ISALQQLVSPYGKTDTASVLLEGMQYIQFLQEQVKVLS 86
Score = 46 (21.3 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 383 LQGKGLCLMPISLATAIS 400
L+ KGLCL+P+ + ++
Sbjct: 106 LRSKGLCLVPLEYTSEVA 123
>TAIR|locus:2155543 [details] [associations]
symbol:HEC1 "HECATE 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010500 "transmitting tissue
development" evidence=IGI] [GO:0048462 "carpel formation"
evidence=IMP] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:AF488618 EMBL:AK228927 IPI:IPI00530790
RefSeq:NP_201507.1 UniGene:At.28829 ProteinModelPortal:Q9FHA7
SMR:Q9FHA7 IntAct:Q9FHA7 EnsemblPlants:AT5G67060.1 GeneID:836841
KEGG:ath:AT5G67060 TAIR:At5g67060 eggNOG:NOG267961
HOGENOM:HOG000242863 InParanoid:Q9FHA7 OMA:FLFNSTH PhylomeDB:Q9FHA7
ProtClustDB:CLSN2684406 Genevestigator:Q9FHA7 GO:GO:0048462
GO:GO:0010500 Uniprot:Q9FHA7
Length = 241
Score = 113 (44.8 bits), Expect = 0.00045, P = 0.00045
Identities = 29/70 (41%), Positives = 36/70 (51%)
Query: 245 AQQPKQRVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYV 304
A +P +R R + DP S ++ LQ LVP K D ASMLDE I YV
Sbjct: 117 AVKPPKRRNVRISK--DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 174
Query: 305 KFLQLQVKVL 314
KFL+ QV+ L
Sbjct: 175 KFLKKQVQSL 184
>TAIR|locus:2074865 [details] [associations]
symbol:HEC2 "AT3G50330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] [GO:0080126 "ovary
septum development" evidence=IGI] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL132976
HOGENOM:HOG000242863 ProtClustDB:CLSN2684406 GO:GO:0048462
GO:GO:0010500 EMBL:BT010607 EMBL:AK175679 EMBL:AK175912
EMBL:AK176020 IPI:IPI00532987 PIR:T45579 RefSeq:NP_190602.1
UniGene:At.35505 ProteinModelPortal:Q9SND4 SMR:Q9SND4 IntAct:Q9SND4
EnsemblPlants:AT3G50330.1 GeneID:824195 KEGG:ath:AT3G50330
TAIR:At3g50330 eggNOG:NOG315110 InParanoid:Q9SND4 OMA:NANMAAM
PhylomeDB:Q9SND4 Genevestigator:Q9SND4 GO:GO:0080126 Uniprot:Q9SND4
Length = 231
Score = 112 (44.5 bits), Expect = 0.00053, P = 0.00053
Identities = 28/68 (41%), Positives = 35/68 (51%)
Query: 247 QPKQRVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYVKF 306
+P +R R + DP S ++ LQ LVP K D ASMLDE I YVKF
Sbjct: 116 KPPKRKNVRISK--DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 173
Query: 307 LQLQVKVL 314
L+ QV+ L
Sbjct: 174 LKKQVQSL 181
>UNIPROTKB|Q6Z1F9 [details] [associations]
symbol:OSJNBa0033D24.39 "BHLH transcription factor-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 GO:GO:0005634
EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005439
EMBL:AP004464 RefSeq:NP_001062365.1 UniGene:Os.89290 GeneID:4346166
KEGG:osa:4346166 Uniprot:Q6Z1F9
Length = 143
Score = 100 (40.3 bits), Expect = 0.00093, P = 0.00093
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 278 MKALQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSM 316
M+ LQ LVP +K T KA +LDEII+YV+ LQ QV+ LSM
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSM 40
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.126 0.361 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 469 374 0.00087 117 3 11 23 0.48 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 84
No. of states in DFA: 601 (64 KB)
Total size of DFA: 219 KB (2121 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.42u 0.12s 28.54t Elapsed: 00:00:02
Total cpu time: 28.43u 0.12s 28.55t Elapsed: 00:00:02
Start: Thu May 9 18:37:27 2013 End: Thu May 9 18:37:29 2013