Query         012180
Match_columns 469
No_of_seqs    131 out of 1290
Neff          8.5 
Searched_HMMs 46136
Date          Thu Mar 28 23:53:57 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012180.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012180hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 PLN03157 spermidine hydroxycin 100.0 1.8E-77 3.9E-82  621.6  42.4  424    7-453     1-441 (447)
  2 PLN02663 hydroxycinnamoyl-CoA: 100.0 1.5E-76 3.3E-81  612.5  42.5  419    7-454     1-427 (431)
  3 PLN02481 Omega-hydroxypalmitat 100.0   3E-76 6.5E-81  610.3  43.8  412    6-453    11-431 (436)
  4 PF02458 Transferase:  Transfer 100.0 1.9E-75   4E-80  605.8  27.3  419    7-459     1-432 (432)
  5 PLN00140 alcohol acetyltransfe 100.0 3.8E-73 8.3E-78  587.7  36.7  422    7-464     1-437 (444)
  6 PRK09294 acyltransferase PapA5  99.5 2.6E-12 5.6E-17  132.7  25.2  320   27-399     7-347 (416)
  7 PF07247 AATase:  Alcohol acety  98.8 2.9E-06 6.2E-11   89.4  25.3  277   64-354    34-367 (480)
  8 TIGR02946 acyl_WS_DGAT acyltra  98.5 7.1E-06 1.5E-10   85.6  18.4  247   63-332    32-310 (446)
  9 COG4908 Uncharacterized protei  98.4 1.6E-05 3.5E-10   78.5  16.8  255   63-350    39-316 (439)
 10 PF00668 Condensation:  Condens  98.1 5.3E-06 1.2E-10   80.8   6.4  221   63-299    41-278 (301)
 11 PRK10252 entF enterobactin syn  97.5  0.0025 5.4E-08   75.5  17.6  257   63-353    44-323 (1296)
 12 PRK12467 peptide synthase; Pro  97.5  0.0036 7.9E-08   81.5  19.0  260   63-352  2682-2956(3956)
 13 PRK12467 peptide synthase; Pro  97.4  0.0019 4.2E-08   83.9  15.9  257   63-352    86-367 (3956)
 14 PRK12316 peptide synthase; Pro  97.3  0.0027 5.9E-08   84.3  16.0  258   63-352    86-367 (5163)
 15 PRK12316 peptide synthase; Pro  97.2  0.0044 9.6E-08   82.3  15.7  261   63-353  2639-2917(5163)
 16 PRK05691 peptide synthase; Val  96.9   0.014 2.9E-07   77.0  16.1  260   63-352  1765-2046(4334)
 17 PRK05691 peptide synthase; Val  96.7   0.021 4.6E-07   75.3  15.5  258   63-352   712-993 (4334)
 18 PF03007 WES_acyltransf:  Wax e  96.1    0.04 8.7E-07   53.3   9.9  137   30-175     1-154 (263)
 19 PRK13757 chloramphenicol acety  64.0     5.8 0.00013   37.1   2.7   29  150-178   185-213 (219)
 20 PF00302 CAT:  Chloramphenicol   61.2       6 0.00013   36.7   2.3   37  135-173   165-205 (206)
 21 PF07428 Tri3:  15-O-acetyltran  58.0      29 0.00063   34.5   6.3   88  232-328   267-355 (413)
 22 PRK11856 branched-chain alpha-  48.5      13 0.00029   38.2   2.7   29  150-178   375-403 (411)
 23 PRK11855 dihydrolipoamide acet  42.0      20 0.00042   38.6   2.8   29  150-178   512-540 (547)
 24 PF00198 2-oxoacid_dh:  2-oxoac  31.9      38 0.00082   31.9   2.7   30  149-178   195-224 (231)
 25 PRK11854 aceF pyruvate dehydro  29.3      40 0.00087   37.0   2.7   29  150-178   598-626 (633)
 26 PRK11857 dihydrolipoamide acet  28.8      44 0.00096   33.0   2.6   29  150-178   270-298 (306)
 27 TIGR01349 PDHac_trf_mito pyruv  28.3      44 0.00096   34.8   2.7   29  150-178   400-428 (435)
 28 PRK14843 dihydrolipoamide acet  26.9      50  0.0011   33.3   2.6   29  150-178   312-340 (347)
 29 PLN02528 2-oxoisovalerate dehy  26.8      50  0.0011   34.1   2.7   29  150-178   378-406 (416)
 30 COG4845 Chloramphenicol O-acet  25.8      65  0.0014   29.6   2.9   45  134-178   166-212 (219)
 31 PTZ00144 dihydrolipoamide succ  25.3      55  0.0012   33.8   2.7   30  149-178   380-409 (418)
 32 TIGR01347 sucB 2-oxoglutarate   23.4      63  0.0014   33.3   2.7   29  150-178   366-394 (403)
 33 PRK05704 dihydrolipoamide succ  22.8      67  0.0014   33.2   2.7   29  150-178   370-398 (407)
 34 TIGR02927 SucB_Actino 2-oxoglu  22.5      65  0.0014   35.0   2.7   30  150-179   552-581 (590)
 35 PLN02226 2-oxoglutarate dehydr  22.2      68  0.0015   33.6   2.6   30  149-178   425-454 (463)
 36 PF05660 DUF807:  Coxiella burn  20.9      43 0.00094   27.9   0.7   12  311-322    16-27  (142)
 37 TIGR01348 PDHac_trf_long pyruv  20.3      78  0.0017   34.0   2.7   29  150-178   511-539 (546)

No 1  
>PLN03157 spermidine hydroxycinnamoyl transferase; Provisional
Probab=100.00  E-value=1.8e-77  Score=621.60  Aligned_cols=424  Identities=24%  Similarity=0.415  Sum_probs=346.3

Q ss_pred             EEEEEEeeeeEecCCCCCCCeecCCcccCcCCceeeEEEEEEcCCCCCCCCCCCcHHHHHHHHHHHHHhhccccCcEEEe
Q 012180            7 FIVTVSKKDVVAAVLPLQEHWLPLSNLDLLLPAIDFGVFFCYKKPTAADFGSFGSTVDVLKKAMAEALVSYYALAGEVVY   86 (469)
Q Consensus         7 ~~V~i~~~~~V~P~~p~~~~~~~LS~lD~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~   86 (469)
                      |.|+|.++++|+|+.|++.+.++||.|||..++.|+..+|||+.+...   +..+++++||+||+++|++||||||||+.
T Consensus         1 ~~v~~~~~~~v~Ps~ptp~~~~~LS~lD~~~~~~~v~~v~fy~~~~~~---~~~~~~~~Lk~sLs~~L~~fyplAGRl~~   77 (447)
T PLN03157          1 MVVILKASYTVKPAKPTWTGRRSLSEWDQVGTITHVPTIYFYSPPWNT---SSGSIIEILKDSLSRALVPFYPLAGRLRW   77 (447)
T ss_pred             CeEEEeccEEECCCCCCCCCccCCChhhhccccccCCEEEEEeCCCcc---ccccHHHHHHHHHHHHHhhccccCEEEEE
Confidence            579999999999999998899999999999889999999999865421   22356899999999999999999999998


Q ss_pred             cCCCCcEEEecCCCeeEEEEecccccccccCCCCChhhhcccCCCCC------CCCeeEEEEeEEecCeEEEEccccccc
Q 012180           87 NYDGEPELLCNNRGVDFVEAYAEVELRDLNLYNPDESIEGKLLPKKK------KNGLLSVQATELKCGGIVVACTLDHRI  160 (469)
Q Consensus        87 ~~~G~~~i~~~~~gv~~~~a~~~~~l~~l~~~~p~~~~~~~l~P~~~------~~pll~vQvt~f~~GG~~l~~~~~H~v  160 (469)
                      +++|+++|+||++||+|+||+++++++|+....|... ...|+|..+      ..|++.||||+|.|||++||+++||.+
T Consensus        78 ~~~g~~~i~c~~~Gv~fveA~~~~~l~~~~~~~~~~~-~~~l~P~~~~~~~~~~~Pll~vQvT~F~cGG~~lg~~~~H~v  156 (447)
T PLN03157         78 IGGGRLELECNAMGVLLIEAESEAKLDDFGDFSPTPE-FEYLIPSVDYTKPIHELPLLLVQLTKFSCGGISLGLGISHAV  156 (447)
T ss_pred             cCCCcEEEEECCCCeEEEEEEeCCcHHHhhccCCCHH-HHhhcCCCCcccccccCceEEEEEEEecCCCEEEEEEeeccc
Confidence            8889999999999999999999999999964444433 355777532      469999999999999999999999999


Q ss_pred             cccccHHHHHHHHHHHHhcCCCCCCCCcCccccCCCCCCCCCCcc-ccccCCCCCCCCCCCCCCCCCccCCCCceEEEEE
Q 012180          161 ADAYSTNMFLVSWAEIAQSKPMSVLPSFRRSILNPRRPLCIDHAF-DDMYLPISSLPPPPPPNNTPEEANGNNLISRIYY  239 (469)
Q Consensus       161 ~Dg~~~~~fl~~wa~~~rg~~~~~~P~~dr~~l~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~  239 (469)
                      +||.|+.+|+++||++|||.+....|++||+.+.++++|...+.+ +.+|...+... . ... .. .....+...++|+
T Consensus       157 ~Dg~~~~~fl~aWA~~~rg~~~~~~P~~dR~~l~~~~~p~~~~~~~~~~~~~~~~~~-~-~~~-~~-~~~~~~~~~~~f~  232 (447)
T PLN03157        157 ADGQSALHFISEWARIARGEPLGTVPFLDRKVLRAGEPPLSAPVFDHAEFSHPPLLI-G-EQD-NV-EERKKKTTVAMLK  232 (447)
T ss_pred             cchHhHHHHHHHHHHHhcCCCCCCCCccCcccccCCCCCCcCCccChhhcccCcccc-c-ccc-cc-cccccCceEEEEE
Confidence            999999999999999999987767899999988877765422211 12221111000 0 000 00 0113457789999


Q ss_pred             eCHHHHHHHHHHccCC-----CCCCChhHHHHHHHHHHHHhhCCCCCCCCCceEEEEEEEeCCCCCCCCCCCCCCCCCCC
Q 012180          240 IKSEQLNELQLLASSD-----ECKRTKLESFSAYLWKMVALSGNDNDGSGTRISKMGVVVDGRTRLSSSKGDHVNKSISM  314 (469)
Q Consensus       240 ~~~~~l~~Lk~~~~~~-----~~~~St~d~l~A~lW~~~~~Ar~~~~~~~~~~~~l~~~vd~R~rl~~~~~~~~~~pplp  314 (469)
                      |++++|++||+++..+     ..++|++|+|+||+|+|++|||..   .+++++.+.++||+|+|++         ||+|
T Consensus       233 fs~~~i~~LK~~a~~~~~~~~~~~~St~dalsA~lWr~~~rAr~~---~~~~~~~l~~~vd~R~rl~---------Pplp  300 (447)
T PLN03157        233 LSKDQVEKLKDKANESRSSDNGRPYTRYETVAGHVWRSACKARGH---EPEQPTALGICVDSRSRMQ---------PPLP  300 (447)
T ss_pred             ECHHHHHHHHHhCcccccccCCCCccHHHHHHHHHHHHHHHHccC---CCCCceEEEEEecCCCCCC---------CCCC
Confidence            9999999999998763     246999999999999999999975   4678999999999999999         8999


Q ss_pred             CCCccccccccccccchhhhhcCcHHHHHHHHHHHHHhcCChhHHhhHHHHHHhcCCCCcccccccc----CC-CCCCcE
Q 012180          315 DSYFGNVLSVPFGGQKVNELIEKPLSWVAKRVHDFLENAVTKDHFLGLIDWVEAHRPDPAISKICAT----GS-KDGPAF  389 (469)
Q Consensus       315 ~~y~GN~~~~~~~~~~~~~l~~~~L~~~A~~ir~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~  389 (469)
                      ++||||++..+.+..+.+|+.+.+|+++|..||+++++ ++++++++.++|++.+++......+...    +. ....++
T Consensus       301 ~~Y~GN~v~~~~~~~~~~el~~~~l~~~a~~Ir~ai~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (447)
T PLN03157        301 DGYFGNATLDVIAESTSGELVSKPLGYASSKIREAIEK-VTNEYVQSAIDYLKNQEDLTRFQDLHALGGAEGPFYGNPNL  379 (447)
T ss_pred             CCcccceeeeccchhhHHHHhhCCHHHHHHHHHHHHHH-hHHHHHHHHHHHHhhCccchhhhcccccccccccccCCCce
Confidence            99999999998888889999999999999999999977 7999999999999876543211111000    11 134679


Q ss_pred             EEeecCCCCCCccccCCCccccccccccCCCCceEEEecCCCCCCCcEEEEEeCCHHHHHHHHh
Q 012180          390 VVSSGQRFPVSKVDFGWGKPVFGSYHFPWGSDAGYVMPMPSPAHNSDWVVYMHLSEKQLDLIET  453 (469)
Q Consensus       390 ~~ssw~~~~~~~~DFG~G~P~~~~~~~p~~~~~g~~~i~p~~~~~g~~~v~v~L~~~~m~~l~~  453 (469)
                      .+|||.++++|++|||||+|.++.+..  ...+|.++++|++.++|||+|.|+|++++|++|++
T Consensus       380 ~vssw~~~~~y~~DFGwGkp~~~~p~~--~~~~g~~~l~~~~~~~g~iev~v~L~~~~M~~f~~  441 (447)
T PLN03157        380 GVVSWLTLPIYGLDFGWGKEIYMGPGT--HDFDGDSLLLPGQNEDGSVILALCLQVAHMEAFKK  441 (447)
T ss_pred             EEeecccCCccccccCCCccceecccc--cCCCceEEEeecCCCCCcEEEEEEcCHHHHHHHHH
Confidence            999999999999999999999876522  23579999999988889999999999999999987


No 2  
>PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase
Probab=100.00  E-value=1.5e-76  Score=612.47  Aligned_cols=419  Identities=27%  Similarity=0.453  Sum_probs=345.5

Q ss_pred             EEEEEEeeeeEecCCCCCCCeecCCcccCcCCceeeEEEEEEcCCCCCCCCCCCcHHHHHHHHHHHHHhhccccCcEEEe
Q 012180            7 FIVTVSKKDVVAAVLPLQEHWLPLSNLDLLLPAIDFGVFFCYKKPTAADFGSFGSTVDVLKKAMAEALVSYYALAGEVVY   86 (469)
Q Consensus         7 ~~V~i~~~~~V~P~~p~~~~~~~LS~lD~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~   86 (469)
                      |.|+|.++++|+|+.|++.++++||.|||..++.|+..+|||+.+...   +. ...++||+||+++|.+||+|||||+.
T Consensus         1 ~~v~~~~~~~V~Ps~ptp~~~~~LS~lD~~~~~~~~~~v~fY~~~~~~---~~-~~~~~Lk~sLs~~L~~~yplaGRl~~   76 (431)
T PLN02663          1 MIINVRESTMVRPAEETPRRGLWNSNVDLVVPRFHTPSVYFYRPTGAS---NF-FDPQVMKEALSKALVPFYPMAGRLRR   76 (431)
T ss_pred             CeEEEcCcEEECCCCCCCCCcccCChhhcccccccccEEEEEcCCCCC---Cc-cCHHHHHHHHHHHHhhccccceeeeE
Confidence            579999999999999999999999999999999999999999975421   11 13589999999999999999999999


Q ss_pred             cCCCCcEEEecCCCeeEEEEecccccccccCCCCChhhhcccCCCCC------CCCeeEEEEeEEecCeEEEEccccccc
Q 012180           87 NYDGEPELLCNNRGVDFVEAYAEVELRDLNLYNPDESIEGKLLPKKK------KNGLLSVQATELKCGGIVVACTLDHRI  160 (469)
Q Consensus        87 ~~~G~~~i~~~~~gv~~~~a~~~~~l~~l~~~~p~~~~~~~l~P~~~------~~pll~vQvt~f~~GG~~l~~~~~H~v  160 (469)
                      +++|+++|+|+++||.|++|+++++++|+....|... .+.|+|..+      +.|+|.+|||+|.|||++||+++||.+
T Consensus        77 ~~~g~~~i~c~~~Gv~fv~A~~~~~l~~~~~~~~~~~-~~~l~P~~~~~~~~~~~P~l~vQvt~F~cGG~~lg~~~~H~v  155 (431)
T PLN02663         77 DEDGRIEIDCNAEGVLFVEADTPSVIDDFGDFAPTLE-LRQLIPTVDYSGGISSYPLLVLQVTHFKCGGVSLGVGMQHHA  155 (431)
T ss_pred             CCCCCEEEEECCCCceEEEEecCCCHHHhhccCCCHH-HHhhcCCCCCccccccCceEEEEEEEeccCCEEEEEEecccc
Confidence            8889999999999999999999999999864445433 345776532      479999999999999999999999999


Q ss_pred             cccccHHHHHHHHHHHHhcCCCCCCCCcCccccCCCCCCCCCCccccccCCCCCCCCCCCCCCCCCccCCCCceEEEEEe
Q 012180          161 ADAYSTNMFLVSWAEIAQSKPMSVLPSFRRSILNPRRPLCIDHAFDDMYLPISSLPPPPPPNNTPEEANGNNLISRIYYI  240 (469)
Q Consensus       161 ~Dg~~~~~fl~~wa~~~rg~~~~~~P~~dr~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~  240 (469)
                      +||.|+.+|+++||+++||.+....|++||+.+..++||.... .+..+.+.+.....      .......+...++|+|
T Consensus       156 ~Dg~g~~~fl~awa~~~rg~~~~~~p~~dr~~l~~~~p~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~~~~~f~f  228 (431)
T PLN02663        156 ADGFSGLHFINTWSDMARGLDLTIPPFIDRTLLRARDPPQPAF-HHVEYQPPPSMKTP------LETSKPENTTVSIFKL  228 (431)
T ss_pred             cchHHHHHHHHHHHHHhcCCCCCCCCccCccccCCCCCCCCCc-ccccccCCCccccc------cccCCCCCceEEEEEE
Confidence            9999999999999999999876678999998877666655321 11122211111000      0001134567899999


Q ss_pred             CHHHHHHHHHHccCCC--CCCChhHHHHHHHHHHHHhhCCCCCCCCCceEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCc
Q 012180          241 KSEQLNELQLLASSDE--CKRTKLESFSAYLWKMVALSGNDNDGSGTRISKMGVVVDGRTRLSSSKGDHVNKSISMDSYF  318 (469)
Q Consensus       241 ~~~~l~~Lk~~~~~~~--~~~St~d~l~A~lW~~~~~Ar~~~~~~~~~~~~l~~~vd~R~rl~~~~~~~~~~pplp~~y~  318 (469)
                      ++++|++||+++.+..  .++|++|+|+||+|+|++|||..   ++++.+.+.++||+|+|++         ||+|.+|+
T Consensus       229 s~~~i~~LK~~~~~~~~~~~~S~~dalsA~lW~~~~rA~~~---~~~~~~~~~~~vd~R~rl~---------p~lp~~Y~  296 (431)
T PLN02663        229 TRDQLNTLKAKSKEDGNTISYSSYEMLAGHVWRSACKARGL---PDDQETKLYIATDGRSRLR---------PQLPPGYF  296 (431)
T ss_pred             CHHHHHHHHhhCcccCCCcccchHHHHHHHHHhhhhhcccC---CCccceEEEEEecCCcCCC---------CCCCCCcc
Confidence            9999999999987542  46899999999999999999975   4678999999999999998         89999999


Q ss_pred             cccccccccccchhhhhcCcHHHHHHHHHHHHHhcCChhHHhhHHHHHHhcCCCCccccccccCCCCCCcEEEeecCCCC
Q 012180          319 GNVLSVPFGGQKVNELIEKPLSWVAKRVHDFLENAVTKDHFLGLIDWVEAHRPDPAISKICATGSKDGPAFVVSSGQRFP  398 (469)
Q Consensus       319 GN~~~~~~~~~~~~~l~~~~L~~~A~~ir~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~  398 (469)
                      ||++..+.+..+++|+.+.+|+.+|..||+++++ +++++++++++|++..++...+..-  .....+.++.+|||.+++
T Consensus       297 GN~~~~~~~~~~~~el~~~~l~~~a~~ir~ai~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~vssw~~~~  373 (431)
T PLN02663        297 GNVIFTATPIAVAGELQSKPTWYAAGKIHDALVR-MDDDYLRSALDYLELQPDLSALVRG--AHTFRCPNLGITSWVRLP  373 (431)
T ss_pred             cceEEecccccchhhhhhCCHHHHHHHHHHHHHH-hCHHHHHHHHHHHHhCcccchhhcc--cCcCcCCcEEecccCCCC
Confidence            9999999988999999999999999999999977 8999999999999876543221100  011235689999999999


Q ss_pred             CCccccCCCccccccccccCCCCceEEEecCCCCCCCcEEEEEeCCHHHHHHHHhc
Q 012180          399 VSKVDFGWGKPVFGSYHFPWGSDAGYVMPMPSPAHNSDWVVYMHLSEKQLDLIETQ  454 (469)
Q Consensus       399 ~~~~DFG~G~P~~~~~~~p~~~~~g~~~i~p~~~~~g~~~v~v~L~~~~m~~l~~~  454 (469)
                      +|++|||||+|.++++.  ....+|+++++|++.++|+++|.|+|++++|++|+++
T Consensus       374 ~y~~DFGwGkP~~v~~~--~~~~~g~~~~~p~~~~~g~iev~v~L~~~~m~~f~~~  427 (431)
T PLN02663        374 IYDADFGWGRPIFMGPG--GIAYEGLSFILPSPTNDGSLSVAISLQSEHMKLFEKF  427 (431)
T ss_pred             ccccccCCCcccccccc--cccCCCeEEEeccCCCCCcEEEEEECCHHHHHHHHHH
Confidence            99999999999998652  1234689999999877889999999999999999973


No 3  
>PLN02481 Omega-hydroxypalmitate O-feruloyl transferase
Probab=100.00  E-value=3e-76  Score=610.28  Aligned_cols=412  Identities=26%  Similarity=0.438  Sum_probs=344.9

Q ss_pred             eEEEEEEeeeeEecCCCCCCCeecCCcccCcCCceeeEEEEEEcCCCCCCCCCCCcHHHHHHHHHHHHHhhccccCcEEE
Q 012180            6 DFIVTVSKKDVVAAVLPLQEHWLPLSNLDLLLPAIDFGVFFCYKKPTAADFGSFGSTVDVLKKAMAEALVSYYALAGEVV   85 (469)
Q Consensus         6 ~~~V~i~~~~~V~P~~p~~~~~~~LS~lD~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~   85 (469)
                      ++.|++.++++|+|+.|++.++++||.||+.++ .|+..+|||+.++..   +.++++++||+||+++|++||+|||||+
T Consensus        11 ~~~v~~~~~~~V~Ps~ptp~~~~~LS~lD~~~~-~~~~~~~fy~~~~~~---~~~~~~~~Lk~sLs~~L~~~~plAGRL~   86 (436)
T PLN02481         11 QLVVKQKEPELVPPAEETPKGLYFLSNLDQNIA-VIVRTVYCFKSEERG---SNEDPVDVIKKALSKVLVHYYPLAGRLT   86 (436)
T ss_pred             ceEEEEcCCEEeCCCCCCCCCceecCccccCcc-eeeeEEEEECCCCcc---cccCHHHHHHHHHHHHhccccCCCCeee
Confidence            588999999999999999889999999999765 689999999986532   2346799999999999999999999999


Q ss_pred             ecCCCCcEEEecCCCeeEEEEecccccccccC-CCCChhhhcccCCCCC------CCCeeEEEEeEEecCeEEEEccccc
Q 012180           86 YNYDGEPELLCNNRGVDFVEAYAEVELRDLNL-YNPDESIEGKLLPKKK------KNGLLSVQATELKCGGIVVACTLDH  158 (469)
Q Consensus        86 ~~~~G~~~i~~~~~gv~~~~a~~~~~l~~l~~-~~p~~~~~~~l~P~~~------~~pll~vQvt~f~~GG~~l~~~~~H  158 (469)
                      .+++|+++|+|+++||.|++|+++.+++|+.. ..|+......|+|..+      ..|++.+|||+|+|||++||+++||
T Consensus        87 ~~~~g~~~i~c~~~Gv~fvea~~d~~l~~l~~~~~p~~~~~~~l~~~~~~~~~~~~~Pll~vQvT~F~~GG~~lg~~~~H  166 (436)
T PLN02481         87 ISSEGKLIVDCTGEGVVFVEAEANCSIEEIGDITKPDPETLGKLVYDVPGAKNILEIPPLTAQVTRFKCGGFVLGLCMNH  166 (436)
T ss_pred             eCCCCcEEEEEcCCCeEEEEEEecCcHHHhccccCCCCHHHHHhCCCCCCcccccccceeeeccceEecCcEEEEEEecc
Confidence            98889999999999999999999999999863 2453323456665421      4699999999999999999999999


Q ss_pred             cccccccHHHHHHHHHHHHhcCCCCCCCCcCccccCCCCCCCCCCccccccCCCCCCCCCCCCCCCCCccCCCCceEEEE
Q 012180          159 RIADAYSTNMFLVSWAEIAQSKPMSVLPSFRRSILNPRRPLCIDHAFDDMYLPISSLPPPPPPNNTPEEANGNNLISRIY  238 (469)
Q Consensus       159 ~v~Dg~~~~~fl~~wa~~~rg~~~~~~P~~dr~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f  238 (469)
                      .++||.|+.+|+++||++|||.+....|++||+.+..++||.... .+.+|.+.......  .  .  .....++.+++|
T Consensus       167 ~v~Dg~g~~~fl~~WA~~~rg~~~~~~p~~dr~~l~~~~pp~~~~-~~~~~~~~~~~~~~--~--~--~~~~~~~~~~~f  239 (436)
T PLN02481        167 CMFDGIGAMEFVNSWGETARGLPLSVPPFLDRSILRARNPPKIEF-PHQEFAEIEDVSGT--S--K--LYDDEELVYKSF  239 (436)
T ss_pred             ccccHHHHHHHHHHHHHHhcCCCCCCCCCcCcccCCCCCCCCCCc-CccccccccCCccc--c--c--cccccCceEEEE
Confidence            999999999999999999999877677899998887777665332 22333222111100  0  0  012356788999


Q ss_pred             EeCHHHHHHHHHHccCCC--CCCChhHHHHHHHHHHHHhhCCCCCCCCCceEEEEEEEeCCCCCCCCCCCCCCCCCCCCC
Q 012180          239 YIKSEQLNELQLLASSDE--CKRTKLESFSAYLWKMVALSGNDNDGSGTRISKMGVVVDGRTRLSSSKGDHVNKSISMDS  316 (469)
Q Consensus       239 ~~~~~~l~~Lk~~~~~~~--~~~St~d~l~A~lW~~~~~Ar~~~~~~~~~~~~l~~~vd~R~rl~~~~~~~~~~pplp~~  316 (469)
                      +|++++|++||+++..++  .++|++|+|+||+|+|++||+..   ++++.+.+.++||+|+|++         ||+|.+
T Consensus       240 ~fs~~~i~~LK~~a~~~~~~~~~S~~dal~A~iW~~~~rA~~~---~~~~~~~l~~~vd~R~rl~---------Pplp~~  307 (436)
T PLN02481        240 CFDPEKLEKLKSMALEDGVIKKCSTFEALTAFVWRARTKALKM---LPDQQTKLLFAVDGRSRFN---------PPLPKG  307 (436)
T ss_pred             EECHHHHHHHHHhcccccCCCCcChHHHHHHHHHHHHHhccCC---CCCCeEEEEEEEcCccCCC---------CCCCCC
Confidence            999999999999987543  57999999999999999999975   4678999999999999999         899999


Q ss_pred             CccccccccccccchhhhhcCcHHHHHHHHHHHHHhcCChhHHhhHHHHHHhcCCCCccccccccCCCCCCcEEEeecCC
Q 012180          317 YFGNVLSVPFGGQKVNELIEKPLSWVAKRVHDFLENAVTKDHFLGLIDWVEAHRPDPAISKICATGSKDGPAFVVSSGQR  396 (469)
Q Consensus       317 y~GN~~~~~~~~~~~~~l~~~~L~~~A~~ir~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~  396 (469)
                      ||||++..+.+.++++++.+.+|+++|..||+++++ ++++++++.++|++..++.+.          .+.++.+|||.+
T Consensus       308 Y~GN~v~~~~~~~~~~~l~~~~l~~~A~~Ir~~i~~-~~~~~~~~~i~~~~~~~~~~~----------~~~~~~vssw~~  376 (436)
T PLN02481        308 YFGNGIVLTNALTTAGELLENPLSHAVGLVQDAIKM-VNDGYMRSAIDYFEVTRARPS----------LASTLLITTWSR  376 (436)
T ss_pred             ceeeeeeeccccccHHHHhhCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhccCCCC----------CCCcEEEEecCC
Confidence            999999999989999999999999999999999977 899999999999987654321          235799999999


Q ss_pred             CCCCccccCCCccccccccccCCCCceEEEecCCCCCCCcEEEEEeCCHHHHHHHHh
Q 012180          397 FPVSKVDFGWGKPVFGSYHFPWGSDAGYVMPMPSPAHNSDWVVYMHLSEKQLDLIET  453 (469)
Q Consensus       397 ~~~~~~DFG~G~P~~~~~~~p~~~~~g~~~i~p~~~~~g~~~v~v~L~~~~m~~l~~  453 (469)
                      +++|++|||||+|.++.+..  ...+|+++++|...++||++|.|+|++++|++|++
T Consensus       377 ~~~y~~DFG~G~P~~~~p~~--~~~~~~~~~~~~~~~~~gi~v~v~L~~~~M~~f~~  431 (436)
T PLN02481        377 LSFHTTDFGWGEPVLSGPVG--LPEKEVILFLSHGKERKSINVLLGLPASAMKTFQE  431 (436)
T ss_pred             CCcccccccCCccccccccc--cCCCceEEEeccCCCCCcEEEEEECCHHHHHHHHH
Confidence            99999999999999875421  12368899999776678999999999999999997


No 4  
>PF02458 Transferase:  Transferase family;  InterPro: IPR003480 This family includes a number of transferase enzymes. These include anthranilate N-hydroxycinnamoyl/benzoyltransferase that catalyzes the first committed reaction of phytoalexin biosynthesis []. Deacetylvindoline 4-O-acetyltransferase (2.3.1.107 from EC) catalyzes the last step in vindoline biosynthesis is also a member of this family []. The motif HXXXD is probably part of the active site. The family also includes trichothecene 3-O-acetyltransferase.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 2BGH_B 2E1U_B 2E1T_A 2E1V_A 2XR7_A 3B30_A 2RKT_A 3B2S_A 2RKV_A 2ZBA_C ....
Probab=100.00  E-value=1.9e-75  Score=605.78  Aligned_cols=419  Identities=33%  Similarity=0.552  Sum_probs=314.3

Q ss_pred             EEEEEEeeeeEecCCCCCCCeecCCccc-CcCCceeeEEEEEEcCCCCCCCCCCCcHHHHHHHHHHHHHhhccccCcEEE
Q 012180            7 FIVTVSKKDVVAAVLPLQEHWLPLSNLD-LLLPAIDFGVFFCYKKPTAADFGSFGSTVDVLKKAMAEALVSYYALAGEVV   85 (469)
Q Consensus         7 ~~V~i~~~~~V~P~~p~~~~~~~LS~lD-~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~   85 (469)
                      |+|+|.++++|+|+.|++...++||+|| ++++..|+..+|||+.+...   +...++++||+||+++|++||+||||| 
T Consensus         1 m~v~v~~~~~V~Ps~~tp~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~---~~~~~~~~Lk~sLs~~L~~~~~lAGrl-   76 (432)
T PF02458_consen    1 MKVTVLSRSLVKPSSPTPPHTLPLSNLDLQLMPPYYVPVLLFYRPPSSS---DDSDIVDNLKESLSKTLVHYYPLAGRL-   76 (432)
T ss_dssp             ---EEEEECEEE-STTS-TCEEE--HHHHHCCGCSEEEEEEEEE--SSC---HHHHHHHHHHHHHHHHHTTSGGGGSEE-
T ss_pred             CCCEEecCEEEECCCCCCCCcccCchhhcCcccccEEEEEEEecCcccc---ccchHHHHHHHHHHHhHhhCcccCcEE-
Confidence            7899999999999999988899999999 78888899999999987642   122358999999999999999999999 


Q ss_pred             ecCCCCcEEEecCCCeeEEEEecccccccccCCCCChhhhcccCCCCC------CCCeeEEEEeEEecCeEEEEcccccc
Q 012180           86 YNYDGEPELLCNNRGVDFVEAYAEVELRDLNLYNPDESIEGKLLPKKK------KNGLLSVQATELKCGGIVVACTLDHR  159 (469)
Q Consensus        86 ~~~~G~~~i~~~~~gv~~~~a~~~~~l~~l~~~~p~~~~~~~l~P~~~------~~pll~vQvt~f~~GG~~l~~~~~H~  159 (469)
                      .+++|+++|+||++||+|++|+++.+++|+....+.......|+|...      ..|+++||||+|+|||++||+++||.
T Consensus        77 ~~~~~~~~i~c~d~Gv~f~~a~~~~~l~~~~~~~~~~~~~~~l~p~~~~~~~~~~~Pll~vQvt~f~~GG~~lg~~~~H~  156 (432)
T PF02458_consen   77 RDPDGRLEIDCNDDGVEFVEAEADGTLDDLLDLEPPSEFLRDLVPQLPVSSEGEDAPLLAVQVTRFKCGGLALGVSFHHA  156 (432)
T ss_dssp             ESSCTTTEEEECTTTEEEEEEEESS-HHHHCSSSCCGGGGGGGSSS-SSSEEETTEBSEEEEEEEETTTEEEEEEEEETT
T ss_pred             cccccceEEEEecCCCEEEEEecccceeeccccccchHHHHHHhhhcccCCcccccceeEeeeeeecccceeeeeeceec
Confidence            666899999999999999999999999999754444445567777532      47999999999999999999999999


Q ss_pred             ccccccHHHHHHHHHHHHhcCC-CCCCCCcCccccCCCCCCCCCCccccccCCCCCCCCCCCCCCCCCccCCCCceEEEE
Q 012180          160 IADAYSTNMFLVSWAEIAQSKP-MSVLPSFRRSILNPRRPLCIDHAFDDMYLPISSLPPPPPPNNTPEEANGNNLISRIY  238 (469)
Q Consensus       160 v~Dg~~~~~fl~~wa~~~rg~~-~~~~P~~dr~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f  238 (469)
                      ++||.|+.+|+++||++|||.. ....|.++|+.+..+++|.... .+..+..   ....  .     .....+...+.|
T Consensus       157 v~Dg~~~~~fl~~wa~~~rg~~~~~~~p~~~r~~~~~~~~p~~~~-~~~~~~~---~~~~--~-----~~~~~~~~~~~~  225 (432)
T PF02458_consen  157 VADGTGFSQFLKAWAEICRGGSPPSPPPVFDRSLLLPPNPPSVSF-PPSEFEP---FPPE--P-----APPSSKCVSKTF  225 (432)
T ss_dssp             T--HHHHHHHHHHHHHHHHTTCHHHHHHCHSSTTSS-STTHHHGC-TCSCHTT---C--T--T-----S---SSEEEEEE
T ss_pred             cCcccchhHHHHHHHhhhcCCcccccccccchHHhhhccCccccc-ccccccc---cccc--c-----ccccccccccee
Confidence            9999999999999999999973 3345788988776554433211 0111111   0100  0     112345667777


Q ss_pred             EeC---HHHHHHHHHHccCCC--CCCChhHHHHHHHHHHHHhhCCCCCCCCCceEEEEEEEeCCCCCCCCCCCCCCCCCC
Q 012180          239 YIK---SEQLNELQLLASSDE--CKRTKLESFSAYLWKMVALSGNDNDGSGTRISKMGVVVDGRTRLSSSKGDHVNKSIS  313 (469)
Q Consensus       239 ~~~---~~~l~~Lk~~~~~~~--~~~St~d~l~A~lW~~~~~Ar~~~~~~~~~~~~l~~~vd~R~rl~~~~~~~~~~ppl  313 (469)
                      .|+   .++|++||+.+....  ...|++|+|+||+|+|+++||..   .++..+.+.++||+|+|++         ||+
T Consensus       226 ~f~~~~~~~l~~lk~~~~~~~~~~~~St~d~l~A~lWr~~~rar~~---~~~~~~~l~~~vd~R~rl~---------ppl  293 (432)
T PF02458_consen  226 VFSKLSIEKLKKLKSEALSSSSGKPVSTFDALTALLWRCITRARGL---PSDETSRLSFAVDCRKRLN---------PPL  293 (432)
T ss_dssp             EEEHHHHHHHHHHHHHHSTTTSTT-S-HHHHHHHHHHHHHHHHHCH---TTTTCEEEEEEEETHHHSS---------S--
T ss_pred             eecccHHHHHHHHhhccccccCCCCCCeeEEEEEehhhhhcccccc---ccccccccccccccCCCcC---------CCc
Confidence            777   888888888887654  22399999999999999999976   3455699999999999999         899


Q ss_pred             CCCCccccccccccccchhhhhcCcHHHHHHHHHHHHHhcCChhHHhhHHHHHHhcCCCCccccccccCCCCCCcEEEee
Q 012180          314 MDSYFGNVLSVPFGGQKVNELIEKPLSWVAKRVHDFLENAVTKDHFLGLIDWVEAHRPDPAISKICATGSKDGPAFVVSS  393 (469)
Q Consensus       314 p~~y~GN~~~~~~~~~~~~~l~~~~L~~~A~~ir~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ss  393 (469)
                      |++||||++.++.+..+++|+.+++|+.+|..||+++++.++++++++.++|++.......   .. .....+.++.+||
T Consensus       294 p~~Y~GN~~~~~~~~~~~~el~~~~l~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~ss  369 (432)
T PF02458_consen  294 PEGYFGNAVFFAFASATAGELLSEPLSDIARLIREAIAKMVTEEYVRSAIDWVESQSSRKL---IP-SFFPGGPDVVVSS  369 (432)
T ss_dssp             -TTB-S--EEEEEEEEEHHHHHHSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHC-CCCHT---CC-TSTCG-CEEEEEE
T ss_pred             ceeecCceEeecccccchhhhhhhhhhHHHHhhhhhhhccchHHHhhhhhccccccccccc---cc-cccCcCCceeccc
Confidence            9999999999999999999999999999999999999765799999999999988532111   11 1122237899999


Q ss_pred             cCCCCCCccccCCCccccccccccCCCCceEEEecCCCCCCCcEEEEEeCCHHHHHHHHhcccccc
Q 012180          394 GQRFPVSKVDFGWGKPVFGSYHFPWGSDAGYVMPMPSPAHNSDWVVYMHLSEKQLDLIETQASNVF  459 (469)
Q Consensus       394 w~~~~~~~~DFG~G~P~~~~~~~p~~~~~g~~~i~p~~~~~g~~~v~v~L~~~~m~~l~~~d~~~~  459 (469)
                      |.++++|++|||||+|.++++...  ...+.++++|++.++||++|.|+|++++|++|++ |.|||
T Consensus       370 w~~~~~y~~DFG~G~P~~~~~~~~--~~~~~~~~~p~~~~~ggvev~v~L~~~~M~~f~~-d~e~~  432 (432)
T PF02458_consen  370 WRRFPFYEVDFGWGKPVAVRPPSP--PRGGGVFLLPSRGGDGGVEVWVCLPEEAMERFEK-DFEFL  432 (432)
T ss_dssp             ETTSSGGG--TSSSS-SEEEECGC--CSTTEEEEEE-SSTTSSEEEEEEEEHHHHHHHHH-HHH--
T ss_pred             cccCCCcccccCCCCceEEEcccc--cCCCEEEEEccCCCcCcEEEEEECCHHHHhChhh-cccCC
Confidence            999999999999999999875332  2345568899987789999999999999999998 77875


No 5  
>PLN00140 alcohol acetyltransferase family protein; Provisional
Probab=100.00  E-value=3.8e-73  Score=587.68  Aligned_cols=422  Identities=20%  Similarity=0.282  Sum_probs=327.5

Q ss_pred             EEEEEEeeeeEecCCCCCC--CeecCCcccCcCCceeeEEEEEEcCCCCCCCCCCCcHHHHHHHHHHHHHhhccccCcEE
Q 012180            7 FIVTVSKKDVVAAVLPLQE--HWLPLSNLDLLLPAIDFGVFFCYKKPTAADFGSFGSTVDVLKKAMAEALVSYYALAGEV   84 (469)
Q Consensus         7 ~~V~i~~~~~V~P~~p~~~--~~~~LS~lD~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl   84 (469)
                      |.|++.++++|+|+.|++.  ..++||.|||.+++.|++.+|||+.+.... .+..+++++||+||+++|++||||||||
T Consensus         1 ~~v~~~s~~~V~Ps~ptp~~~~~~~LS~lD~~~~~~~~~~~~fY~~~~~~~-~~~~~~~~~Lk~sLs~~L~~fyplAGRl   79 (444)
T PLN00140          1 MEVSIISRELIKPSSPSIHHLKPFKLSLLDQLTPTTYIPMIFFYPTNNNQN-FKGLQISIQLKRSLSETLSTFYPFSGRV   79 (444)
T ss_pred             CeeEEeccceeccCCCCccccccCCCChHHhcccccccceEEEeeCCCccc-ccchhHHHHHHHHHHHHHhhhhccCccc
Confidence            5799999999999999876  588999999999899999999998754210 0113568999999999999999999999


Q ss_pred             EecCCCCcEEEecCCCeeEEEEecccccccccCCCCChhhhcccCCCC--------CCCCeeEEEEeEEecCeEEEEccc
Q 012180           85 VYNYDGEPELLCNNRGVDFVEAYAEVELRDLNLYNPDESIEGKLLPKK--------KKNGLLSVQATELKCGGIVVACTL  156 (469)
Q Consensus        85 ~~~~~G~~~i~~~~~gv~~~~a~~~~~l~~l~~~~p~~~~~~~l~P~~--------~~~pll~vQvt~f~~GG~~l~~~~  156 (469)
                      +.    +++|+||++||.|+||+++.+++|+. ..|+......|+|..        ...|++.||||+|+|||++||+++
T Consensus        80 ~~----~~~i~cn~~Gv~fveA~~~~~l~d~l-~~~~~~~~~~l~p~~~~~~~~~~~~~Pll~vQvT~F~cGG~~lG~~~  154 (444)
T PLN00140         80 KD----NLIIDNYEEGVPFFETRVKGSLSDFL-KHPQLELLNKFLPCQPFSYESDPEAIPQVAIQVNTFDCGGIALGLCF  154 (444)
T ss_pred             cC----CceeEccCCCceEEEEEecCcHHHhc-CCCCHHHHHhhCCCCcccccCCccCCceEEEEEEEeccCcEEEEeee
Confidence            85    47999999999999999999998884 345543346677642        136999999999999999999999


Q ss_pred             cccccccccHHHHHHHHHHHHhcCCC-CCCCCcCcc-ccCCCCCCCCCCccccccCCCCCCCCCCCCCCCCCccCCCCce
Q 012180          157 DHRIADAYSTNMFLVSWAEIAQSKPM-SVLPSFRRS-ILNPRRPLCIDHAFDDMYLPISSLPPPPPPNNTPEEANGNNLI  234 (469)
Q Consensus       157 ~H~v~Dg~~~~~fl~~wa~~~rg~~~-~~~P~~dr~-~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (469)
                      ||.++||.|+.+|+++||++|||.+. ...|.+||. .+.   ||....  ...+...  .. .  .     .....++.
T Consensus       155 ~H~v~Dg~s~~~Fl~~WA~~~rg~~~~~~~P~~dr~~~~~---p~~~~~--~~~~~~~--~~-~--~-----~~~~~~~v  219 (444)
T PLN00140        155 SHKIIDAATASAFLDSWAANTRGHYSEVINPDLFEASSFF---PPLNSF--PVQFLLL--ME-E--N-----WFFKENYI  219 (444)
T ss_pred             ceEcccHHHHHHHHHHHHHHhcCCCCCCCCcccccccccC---CCCCcc--ccccccc--cc-c--c-----ccccCceE
Confidence            99999999999999999999999753 456889985 222   222111  0001000  00 0  0     01234678


Q ss_pred             EEEEEeCHHHHHHHHHHccCCC-CCCChhHHHHHHHHHHHHhhCCCCCCCCCceEEEEEEEeCCCCCCCCCCCCCCCCCC
Q 012180          235 SRIYYIKSEQLNELQLLASSDE-CKRTKLESFSAYLWKMVALSGNDNDGSGTRISKMGVVVDGRTRLSSSKGDHVNKSIS  313 (469)
Q Consensus       235 ~~~f~~~~~~l~~Lk~~~~~~~-~~~St~d~l~A~lW~~~~~Ar~~~~~~~~~~~~l~~~vd~R~rl~~~~~~~~~~ppl  313 (469)
                      .++|+|++++|++||+++.... .++|++|+|+|++|+|++||+... .+.++.+.+.++||+|+|+.         ||+
T Consensus       220 ~~~f~fs~~~I~~LK~~~~~~~~~~~S~~e~vsA~iWr~~~rA~~~~-~~~~~~~~~~~~vn~R~Rl~---------PpL  289 (444)
T PLN00140        220 TKRFVFDAKAIATLRAKAKSKRVPNPSRIETLSCFIWKCCTAASRSI-SAAPRPSISVHAVNIRQRTK---------PPM  289 (444)
T ss_pred             EEEEEECHHHHHHHHHhcccccCCCCchhHHHHHHHHHHHHHHhhhc-cCCCCceEEEEEEeccccCC---------CCC
Confidence            8999999999999999997643 579999999999999999996431 12356899999999999998         899


Q ss_pred             CCCCccccccccccccchhhhhcCcHHHHHHHHHHHHHhcCChhHHhhHHHHHHhcCCCCccccccccCCCCCCc-EEEe
Q 012180          314 MDSYFGNVLSVPFGGQKVNELIEKPLSWVAKRVHDFLENAVTKDHFLGLIDWVEAHRPDPAISKICATGSKDGPA-FVVS  392 (469)
Q Consensus       314 p~~y~GN~~~~~~~~~~~~~l~~~~L~~~A~~ir~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s  392 (469)
                      |.+||||++..+.+..+++|+ ..+|+.+|..||+++++ +|++|+++.+++.+...-...+...-.... ...+ +.+|
T Consensus       290 P~~y~GN~i~~~~~~~~~~~~-~~~l~~~a~~Ir~~i~~-~~~e~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~vs  366 (444)
T PLN00140        290 SRYSIGNLFWWALAAADPADT-KIELNELVSLTRESIAN-YNSDYLKSLQGENGLEGMSEYLNQLVGIFS-EEPEIFLFS  366 (444)
T ss_pred             Ccccccchhhhheeccccccc-ccchHHHHHHHHHHHHH-HHHHHHHHhccchhHHHHHHHHHHHhhccc-CCCceEEec
Confidence            999999999999888888887 58999999999999987 899999998754221000000000000001 1223 4799


Q ss_pred             ecCCCCCCccccCCCccccccccc-cCCCCceEEEecCCCCCCCcEEEEEeCCHHHHHHHHhccccccccccc
Q 012180          393 SGQRFPVSKVDFGWGKPVFGSYHF-PWGSDAGYVMPMPSPAHNSDWVVYMHLSEKQLDLIETQASNVFEPLTF  464 (469)
Q Consensus       393 sw~~~~~~~~DFG~G~P~~~~~~~-p~~~~~g~~~i~p~~~~~g~~~v~v~L~~~~m~~l~~~d~~~~~~~~~  464 (469)
                      ||++|++|++|||||||.++++.. +....+|+++++|.+ ++||+||.|+|++++|++|++ |+||++|.+.
T Consensus       367 sw~r~~~ye~DFGwGkP~~v~~~~~~~~~~~~~~~l~~~~-~~~giev~v~L~~~~M~~f~~-d~e~l~~~~~  437 (444)
T PLN00140        367 SWLNFGLNDVDFGWGKPIWVGLLGEVGPAFRNLTVFKETG-DNNGIEAWITLDEKIMAILER-DPEFLAFATP  437 (444)
T ss_pred             ccccCCccccccCCCCceeeecccccCCcccceEEEEecC-CCCeEEEEEecCHHHHHHHhh-CHHHHhhcCC
Confidence            999999999999999999986521 122346888999886 457899999999999999998 8999999763


No 6  
>PRK09294 acyltransferase PapA5; Provisional
Probab=99.53  E-value=2.6e-12  Score=132.74  Aligned_cols=320  Identities=17%  Similarity=0.121  Sum_probs=185.9

Q ss_pred             eecCCcccCcCCc--eeeEEEEEEcCCCCCCCCCCCcHHHHHHHHHHHHHhhccccCcEEEecCCCCcEEEecCC---Ce
Q 012180           27 WLPLSNLDLLLPA--IDFGVFFCYKKPTAADFGSFGSTVDVLKKAMAEALVSYYALAGEVVYNYDGEPELLCNNR---GV  101 (469)
Q Consensus        27 ~~~LS~lD~~~~~--~~~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~G~~~i~~~~~---gv  101 (469)
                      ..+|++...+++.  .|+..  .+..+..       -..+.|++||.+++..+|.|..++....+|.+.....+.   .+
T Consensus         7 ~~~L~~~~~~f~~~~~~~~~--~~~l~g~-------lD~~~L~~Al~~l~~rhp~Lr~~~~~~~~~~~~~~~~~~~~~~v   77 (416)
T PRK09294          7 IRKLAPSEEVFARYEAFTGY--TAHLRGV-------LDIDALSDAFDALLRAHPVLAAHLEQDSDGGWELVADDLLHPGI   77 (416)
T ss_pred             ccCCchHHhhhhccCceEEE--EEEEcCC-------CCHHHHHHHHHHHHHhCHHhhEEEEECCCCceEEeeCCcCCCCe
Confidence            4555555555432  33333  3444332       137999999999999999999999655556554433321   23


Q ss_pred             eEEEEecccccccccCCCCChhhhcccCCCCCCCCeeEEEEeEEecCeEEEEccccccccccccHHHHHHHHHHHHhc--
Q 012180          102 DFVEAYAEVELRDLNLYNPDESIEGKLLPKKKKNGLLSVQATELKCGGIVVACTLDHRIADAYSTNMFLVSWAEIAQS--  179 (469)
Q Consensus       102 ~~~~a~~~~~l~~l~~~~p~~~~~~~l~P~~~~~pll~vQvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg--  179 (469)
                      .++..+.   .++.          ..+ +.....+++.+.+. ..+++..|.+.+||.++||.|+..|++.+.++++.  
T Consensus        78 ~~~d~~~---~~~~----------~~~-~l~~~~~l~~~~~~-~~~~~~~l~l~~hH~i~DG~S~~~ll~el~~~Y~~~~  142 (416)
T PRK09294         78 VVVDGDA---ARPL----------PEL-QLDQGVSLLALDVV-PDDGGARVTLYIHHSIADAHHSASLLDELWSRYTDVV  142 (416)
T ss_pred             EEEeccc---cccc----------CCC-CCCCCCceEEEEEE-EcCCCEEEEEEeccEeEccccHHHHHHHHHHHHHHHH
Confidence            2222110   0000          001 11112346666654 23578899999999999999999999999998862  


Q ss_pred             ---CCCCC--CCCc-C-ccccCCCCCCC--CC--CccccccCC--CCCCCCCCCCCCCCCccCCCCceEEEEEeCHHHHH
Q 012180          180 ---KPMSV--LPSF-R-RSILNPRRPLC--ID--HAFDDMYLP--ISSLPPPPPPNNTPEEANGNNLISRIYYIKSEQLN  246 (469)
Q Consensus       180 ---~~~~~--~P~~-d-r~~l~~~~~p~--~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~l~  246 (469)
                         .+...  .|.. . .+.+..+....  ..  ...+..+..  .+..+.+  +... ............+.|+++..+
T Consensus       143 ~~~~~~~~~~~~~~~~~ed~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--~~~~-~~~~~~~~~~~~~~l~~~~~~  219 (416)
T PRK09294        143 TTGDPGPIRPQPAPQSLEAVLAQRGIRRQALSGAERFMPAMYAYELPPTPTA--AVLA-KPGLPQAVPVTRCRLSKAQTS  219 (416)
T ss_pred             hCCCCCCCCCCCCCcCHHHHHHhcCCCcccccchhhhhhhhccccCCCCCcC--cCCC-CCCCCCCCceeEEEeCHHHHH
Confidence               22111  1110 0 01111111000  00  001111100  1111100  0000 000112233556789999999


Q ss_pred             HHHHHccCCCCCCChhHHHHHHHHHHHHhhCCCCCCCCCceEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCccccccccc
Q 012180          247 ELQLLASSDECKRTKLESFSAYLWKMVALSGNDNDGSGTRISKMGVVVDGRTRLSSSKGDHVNKSISMDSYFGNVLSVPF  326 (469)
Q Consensus       247 ~Lk~~~~~~~~~~St~d~l~A~lW~~~~~Ar~~~~~~~~~~~~l~~~vd~R~rl~~~~~~~~~~pplp~~y~GN~~~~~~  326 (469)
                      +|++.|.+.  .+|.+++|.|.+|.++.+....    ++....+.++||.|+++.         |+++..+++|++....
T Consensus       220 ~L~~~a~~~--~~t~~~~l~Aa~~~~l~r~~~~----~~~~i~~~~pv~~R~~l~---------p~~~~~~~~n~~g~~~  284 (416)
T PRK09294        220 SLAAFGRRH--RLTVNALVSAAILLAEWQLRRT----PHVPLPYVYPVDLRFRLT---------PPVAATEGTNLLGAAT  284 (416)
T ss_pred             HHHHHHHHc--CCcHHHHHHHHHHHHHHHhcCC----CCCceeeecchhhHhhcC---------CCCCcccceeeEeeee
Confidence            999999875  4899999999999999988653    345667889999999998         7888888999987655


Q ss_pred             cccchhhhhcCcHHHHHHHHHHHHHhcCChhHHh-hHHHHHHhcCCCCccccccccCCCCCCcEEEeecCCCCC
Q 012180          327 GGQKVNELIEKPLSWVAKRVHDFLENAVTKDHFL-GLIDWVEAHRPDPAISKICATGSKDGPAFVVSSGQRFPV  399 (469)
Q Consensus       327 ~~~~~~~l~~~~L~~~A~~ir~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~  399 (469)
                      ...+++  .+.++.++|+.+++.+++.++.+.+. ++..+.......+         ....+.+.+|||.+++.
T Consensus       285 ~~~~~~--~~~sf~ela~~v~~~~~~~l~~~~v~~~~~~~~~~~~~~~---------~~~~~~v~~Snlg~~~~  347 (416)
T PRK09294        285 YLAEIG--PDTDIVDLARAIAATLRADLADGVIQQSFLHFGTAFEGTP---------PGLPPVVFITNLGVAPP  347 (416)
T ss_pred             eecccc--CCCCHHHHHHHHHHHHhhhhhcceeeehhhcccccccCCC---------CCCCCeEEEecCCcCCC
Confidence            444333  24689999999999997656666642 3322201000000         01234688999999953


No 7  
>PF07247 AATase:  Alcohol acetyltransferase;  InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2.3.1.84 from EC) enzymes approximately 500 residues long that seem to be restricted to Saccharomyces. These catalyse the esterification of isoamyl alcohol by acetyl coenzyme A [].; GO: 0004026 alcohol O-acetyltransferase activity, 0006066 alcohol metabolic process
Probab=98.76  E-value=2.9e-06  Score=89.44  Aligned_cols=277  Identities=17%  Similarity=0.106  Sum_probs=144.6

Q ss_pred             HHHHHHHHHHHhhccccCcEEEecCCCCcEEEecCCCe---eEEEEecccccccc---------cC--CCCChhhhc---
Q 012180           64 DVLKKAMAEALVSYYALAGEVVYNYDGEPELLCNNRGV---DFVEAYAEVELRDL---------NL--YNPDESIEG---  126 (469)
Q Consensus        64 ~~L~~sL~~~L~~~p~LaGrl~~~~~G~~~i~~~~~gv---~~~~a~~~~~l~~l---------~~--~~p~~~~~~---  126 (469)
                      +.|..||++++..+|.|+-.+....+....-..+++..   ++...-....++|+         ..  ...+..+..   
T Consensus        34 ~~l~~AL~~~I~~~P~L~~~i~~~~~~~~~~~~~~~~~~~~P~~~~l~~I~l~dvV~~~~~e~~~~~d~~~~~~l~~~l~  113 (480)
T PF07247_consen   34 NQLYHALRSVILKHPILSVNIFGEDDPEDDAYYNSDNYTVRPYFKRLPSIDLDDVVSFEQREEFRDEDEKFDEELLEILN  113 (480)
T ss_pred             HHHHHHHHHHHHhCccEEEEEeccCCcccccccccccceecccccccCeEEHHHeeccCCccccccCCccccHHHHHHHh
Confidence            56999999999999999999886531111111111100   00000000111111         10  011111111   


Q ss_pred             -ccCCCCCC-CCeeEEEEeEEecC----eEEEEccccccccccccHHHHHHHHHHHHhcCCCCCC---------CCcCcc
Q 012180          127 -KLLPKKKK-NGLLSVQATELKCG----GIVVACTLDHRIADAYSTNMFLVSWAEIAQSKPMSVL---------PSFRRS  191 (469)
Q Consensus       127 -~l~P~~~~-~pll~vQvt~f~~G----G~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~---------P~~dr~  191 (469)
                       .-+|.... .|+-++-|  +...    ..-|.+.+||+++||.|...|.+.+-+..+.......         +..+..
T Consensus       114 ~~~~~~~~~~~P~Wrl~v--l~~~~~~~~~~i~f~~~H~i~DG~Sg~~Fh~~ll~~L~~~~~~~~~~~~~~i~~~~~~~~  191 (480)
T PF07247_consen  114 NHNFPYDDPTKPLWRLIV--LPNEDDESFQFIVFVFHHAIFDGMSGKIFHEDLLEALNSLSSDPEPDDNDVIFDPSSDVE  191 (480)
T ss_pred             hcccCCCCCCCCCeEEEE--ECCCCCCcceEEEEEecccccccHHHHHHHHHHHHHHhhccccccccccCceecCCcccc
Confidence             11333333 37765444  5433    4688999999999999999999999888874221111         001111


Q ss_pred             ccCCCCCCCCCCcc--cccc--------CC--CCCCCCCC---CCCC-C-CCccCCCCceEEEEEeCHHHHHHHHHHccC
Q 012180          192 ILNPRRPLCIDHAF--DDMY--------LP--ISSLPPPP---PPNN-T-PEEANGNNLISRIYYIKSEQLNELQLLASS  254 (469)
Q Consensus       192 ~l~~~~~p~~~~~~--~~~~--------~~--~~~~~~~~---~~~~-~-~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~  254 (469)
                      .+. .-|+.++...  ...+        ..  .+.+....   .+.. . .......+...+.+.|+++++++|++.|.+
T Consensus       192 ~~~-~LP~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~i~~~~~~~ll~~CR~  270 (480)
T PF07247_consen  192 HLP-SLPPPIEELIKSSPSLYFLPKSLWSSFIFPSLFFSKWSDKPIFATIPPIPKPFKTRYRSLSISPEELKKLLKACRK  270 (480)
T ss_pred             ccc-CCCcCHHHhhhccccHHHHHHHHHHHhhhhhccccccccCCccCCCCccccCCcceEEEEEECHHHHHHHHHHHHH
Confidence            010 1111111000  0000        00  00000000   0000 0 000112234567999999999999999998


Q ss_pred             CCCCCChhHHHHHHHHHHHHhhCCCCCCCCCceEEEEEEEeCCCCCCCCCCCCCCCCCCC---CCCcccccccccc----
Q 012180          255 DECKRTKLESFSAYLWKMVALSGNDNDGSGTRISKMGVVVDGRTRLSSSKGDHVNKSISM---DSYFGNVLSVPFG----  327 (469)
Q Consensus       255 ~~~~~St~d~l~A~lW~~~~~Ar~~~~~~~~~~~~l~~~vd~R~rl~~~~~~~~~~pplp---~~y~GN~~~~~~~----  327 (469)
                      ++  +|-...|.|++-.++.+................+++|+|+.+..         ...   ..-+|+.+...-.    
T Consensus       271 ~~--~TlT~~L~al~~~al~~~~~~~~~~~~~~~~~~~pvnlR~~~p~---------~~~~~~~~~~g~~v~~~~~~~~~  339 (480)
T PF07247_consen  271 HG--TTLTALLHALIALALSKVQLPKPKSEKSSFKISTPVNLRRFLPE---------DSELRDEYSYGNFVGGIDFSYSI  339 (480)
T ss_pred             cC--CCHHHHHHHHHHHHHHhhhcccccccCceEEEEeeeeCCCCCCc---------cccccccccceeEEEccceeeec
Confidence            75  67777888888888887522111122346788899999999972         333   3456887764221    


Q ss_pred             -ccchhhhhcCcHHHHHHHHHHHHHhcC
Q 012180          328 -GQKVNELIEKPLSWVAKRVHDFLENAV  354 (469)
Q Consensus       328 -~~~~~~l~~~~L~~~A~~ir~~i~~~~  354 (469)
                       ......-....++++|+.+++.+++.+
T Consensus       340 ~~~~~~~~~~~~fW~~a~~~~~~i~~~i  367 (480)
T PF07247_consen  340 SPVSASRGSSENFWELARQIQKEIKESI  367 (480)
T ss_pred             ccccccccchHHHHHHHHHHHHHHHHHH
Confidence             111111113568999999999887643


No 8  
>TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This bacteria-specific protein family includes a characterized, homodimeric, broad specificity acyltransferase from Acinetobacter sp. strain ADP1, active as wax ester synthase, as acyl coenzyme A:diacylglycerol acyltransferase, and as acyl-CoA:monoacylglycerol acyltransferase.
Probab=98.48  E-value=7.1e-06  Score=85.63  Aligned_cols=247  Identities=16%  Similarity=0.085  Sum_probs=124.0

Q ss_pred             HHHHHHHHHHHHhhccccCcEEEecC--CCCc-EEEecCCCeeEEEEecccccccccCCCCChhh---hccc--CCCCCC
Q 012180           63 VDVLKKAMAEALVSYYALAGEVVYNY--DGEP-ELLCNNRGVDFVEAYAEVELRDLNLYNPDESI---EGKL--LPKKKK  134 (469)
Q Consensus        63 ~~~L~~sL~~~L~~~p~LaGrl~~~~--~G~~-~i~~~~~gv~~~~a~~~~~l~~l~~~~p~~~~---~~~l--~P~~~~  134 (469)
                      .+.|++++.+++.++|.|--++...+  .|.. ++......+...+..     .++........+   ....  -|....
T Consensus        32 ~~~l~~al~~~~~rh~~LR~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-----~~~~~~~~~~~~~~~~~~~~~~p~dl~  106 (446)
T TIGR02946        32 FEALRALLESRLPLAPRFRQRLREVPLGLGHPYWVEDPDFDLDYHVRR-----VALPAPGTRRELLELVGRLMSTPLDRS  106 (446)
T ss_pred             HHHHHHHHHHhhccCChhhcccccCCCCCCCcEEeeCCCCChHHhhcc-----ccCCCCCCHHHHHHHHHHHhcCCCCCC
Confidence            68999999999999999999997542  2332 221111111111100     011100011111   0111  132223


Q ss_pred             CCeeEEEEeE-EecCeEEEEccccccccccccHHHHHHHHHHHHhcCCCCCCC----CcC-ccccC-CCC-CCC--CCCc
Q 012180          135 NGLLSVQATE-LKCGGIVVACTLDHRIADAYSTNMFLVSWAEIAQSKPMSVLP----SFR-RSILN-PRR-PLC--IDHA  204 (469)
Q Consensus       135 ~pll~vQvt~-f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~P----~~d-r~~l~-~~~-~p~--~~~~  204 (469)
                      .|++.+.+.. ..+|...+-+.+||.++||.|+..+++.+.+...+......|    ... ++... ... .+.  ....
T Consensus       107 ~Pl~r~~li~~~~~~~~~l~~~~HH~i~DG~S~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (446)
T TIGR02946       107 RPLWEMHLIEGLAGGRFAVLTKVHHALADGVAGLRLLARLLDDDPDPPPLPAPPPPPQPSTRGLLSGALSGLPSALLRRV  186 (446)
T ss_pred             CCCeEEEEEeccCCCeEEEEEEeehhhhchHHHHHHHHHHcCCCCCCCCCCCCCCCCCCchhhhhhhhhhhhHHHHHHHH
Confidence            5888888776 656789999999999999999999998876654322110001    000 00000 000 000  0000


Q ss_pred             ---------ccccc-C---CCCCCCCC-CCCCCCCCccCCCCceEEEEEeCHHHHHHHHHHccCCCCCCChhHHHHHHHH
Q 012180          205 ---------FDDMY-L---PISSLPPP-PPPNNTPEEANGNNLISRIYYIKSEQLNELQLLASSDECKRTKLESFSAYLW  270 (469)
Q Consensus       205 ---------~~~~~-~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~St~d~l~A~lW  270 (469)
                               ..... .   .......+ ..+...   ........+.+.+....+++||+.+...  .+|.||++.|.+-
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~r~~~~~~~~~~~l~~~a~~~--g~T~ndvllaa~~  261 (446)
T TIGR02946       187 ASTAPGVVRAAGRAVEGVARSARPALPFTAPPTP---LNGPISRKRRFAAQSLPLADVKAVAKAF--GVTINDVVLAAVA  261 (446)
T ss_pred             HHHHHHHHHHHHHHHhhhcccccccCCCCCCCCc---CCCCCCccceEEeeccCHHHHHHHHHHh--CCCHHHHHHHHHH
Confidence                     00000 0   00000000 000000   1111123445666666677777666553  4899999998877


Q ss_pred             HHHHhhCCCCCCCCCceEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCccccccccccccchh
Q 012180          271 KMVALSGNDNDGSGTRISKMGVVVDGRTRLSSSKGDHVNKSISMDSYFGNVLSVPFGGQKVN  332 (469)
Q Consensus       271 ~~~~~Ar~~~~~~~~~~~~l~~~vd~R~rl~~~~~~~~~~pplp~~y~GN~~~~~~~~~~~~  332 (469)
                      .++.+--...+..+.....+.++||.|....             ..-.||.+......++.+
T Consensus       262 ~al~~~~~~~~~~~~~~i~~~~pv~~R~~~~-------------~~~~~N~~~~~~~~l~~~  310 (446)
T TIGR02946       262 GALRRYLEERGELPDDPLVAMVPVSLRPMED-------------DSEGGNQVSAVLVPLPTG  310 (446)
T ss_pred             HHHHHHHHHcCCCCCCceEEEEeeecccccc-------------CCCCCCEEEEEEecCCCC
Confidence            7776532111112445688999999997643             234567666555555543


No 9  
>COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only]
Probab=98.39  E-value=1.6e-05  Score=78.49  Aligned_cols=255  Identities=16%  Similarity=0.147  Sum_probs=150.6

Q ss_pred             HHHHHHHHHHHHhhccccCcEEEecCCCC-c--EEEecCCC--eeEEEEecccccccccCCCCChhhhcccC---CC-CC
Q 012180           63 VDVLKKAMAEALVSYYALAGEVVYNYDGE-P--ELLCNNRG--VDFVEAYAEVELRDLNLYNPDESIEGKLL---PK-KK  133 (469)
Q Consensus        63 ~~~L~~sL~~~L~~~p~LaGrl~~~~~G~-~--~i~~~~~g--v~~~~a~~~~~l~~l~~~~p~~~~~~~l~---P~-~~  133 (469)
                      ++.|++||.-+.+..|.|+-+......+. |  ..+.+-+.  +.+.+...|.++.+..        ..+|+   +. ..
T Consensus        39 i~~lkkAl~~svka~piL~c~f~eg~~~~~Wq~i~d~~v~~~~i~l~~t~~~~~~~E~~--------fs~Fi~~k~~~t~  110 (439)
T COG4908          39 IDRLKKALRYSVKAVPILSCKFSEGEKRPFWQRILDFEVDQIAIHLEETKTDEPFGEVA--------FSRFIVRKLNITK  110 (439)
T ss_pred             HHHHHHHHHHHHHhhhhhhhhhhhcccchhHHHHhcccccceeEEEeeecccccchhHH--------HHHHHhccccccc
Confidence            79999999999999999999886543221 2  12223222  2232222333333331        12221   22 23


Q ss_pred             CCCeeEEEEeEEecCeEEEEccccccccccccHHHHHHHHHHHHhcCCC--CCCCCcC----ccccCCCCCC--------
Q 012180          134 KNGLLSVQATELKCGGIVVACTLDHRIADAYSTNMFLVSWAEIAQSKPM--SVLPSFR----RSILNPRRPL--------  199 (469)
Q Consensus       134 ~~pll~vQvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~--~~~P~~d----r~~l~~~~~p--------  199 (469)
                      ..|.+.+=+++- |-|=.|.+.+||+++||.|+...+...|+++.+..-  ...|...    |+....++.-        
T Consensus       111 ~~PqI~v~~~r~-~~~d~L~i~lhH~~~DgrG~leyL~ll~~~Ys~L~~~~~~~p~~~~~g~k~i~~v~d~f~~~~~~r~  189 (439)
T COG4908         111 ESPQIKVFVVRQ-TVGDTLVINLHHAVCDGRGFLEYLYLLARLYSKLLDNPNYQPNEESKGSKDIFGVRDLFDVLERKRG  189 (439)
T ss_pred             CCCeEEEeeehh-ccCcEEEEEechhhhcchhHHHHHHHHHHHHHhcccCCCCCcchhhccccchhhhhhhhhHHHHHHH
Confidence            488877777766 688899999999999999999999999999986431  1223211    1111000000        


Q ss_pred             CCCCccccccCCCCCCCCCCCCCCCCCccCCCCceEEEEEeCHHHHHHHHHHccCCCCCCChhHHHHHHHHHHHHhhCCC
Q 012180          200 CIDHAFDDMYLPISSLPPPPPPNNTPEEANGNNLISRIYYIKSEQLNELQLLASSDECKRTKLESFSAYLWKMVALSGND  279 (469)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~St~d~l~A~lW~~~~~Ar~~  279 (469)
                      .+....++.-  ++. .   .|..  .....+.+.--.+.++.++++.+++-+..++  .|-||++.|.+-+-...=...
T Consensus       190 ~ik~~~e~n~--i~~-~---fP~~--~s~d~~~m~~~~~~I~~~ef~~ikay~k~~g--aTiNDiilaa~~~fr~~y~~~  259 (439)
T COG4908         190 LIKNLIERNR--ITR-V---FPLG--GSPDGPNMSFEKTTIPSDEFKKIKAYAKVHG--ATINDIILAALLKFRLLYNTT  259 (439)
T ss_pred             hhhhhhccCC--CCc-c---CCCc--CCCCCCcceEEEEecCHHHHHHHHHhhhhcC--CcHHHHHHHHHHHHHHHHhhh
Confidence            0000000000  000 0   0100  0123445666778899999999999998764  899999888663222211111


Q ss_pred             CCCCCCceEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCccccccccccccchhhhhcCcHHHHHHHHHHHH
Q 012180          280 NDGSGTRISKMGVVVDGRTRLSSSKGDHVNKSISMDSYFGNVLSVPFGGQKVNELIEKPLSWVAKRVHDFL  350 (469)
Q Consensus       280 ~~~~~~~~~~l~~~vd~R~rl~~~~~~~~~~pplp~~y~GN~~~~~~~~~~~~~l~~~~L~~~A~~ir~~i  350 (469)
                      .+ +........++||+|+.+..           -...+||...........+|+  .++..+.+.+....
T Consensus       260 ~~-k~~~~lsi~~~VDlRkyl~s-----------k~~sI~Nls~~~~i~I~~dd~--~~fe~t~~~vk~~~  316 (439)
T COG4908         260 HE-KANNYLSIDMPVDLRKYLPS-----------KEESISNLSSYLTIVINVDDV--TDFEKTLEKVKGIM  316 (439)
T ss_pred             ch-hhcCeeeeceeeehhhhccc-----------cccceeccceeEEEEEecccc--ccHHHHHHHHHhhc
Confidence            01 22356788899999999873           126788988776666777776  45666666666554


No 10 
>PF00668 Condensation:  Condensation domain;  InterPro: IPR001242 This domain is found in many multi-domain enzymes which synthesize peptide antibiotics. This domain catalyses a condensation reaction to form peptide bonds in non-ribosomal peptide biosynthesis. It is usually found to the carboxy side of a phosphopantetheine binding domain (pp-binding). It has been shown that mutations in the HHXXXDG motif abolish activity suggesting this is part of the active site []. ; PDB: 2JGP_A 2VSQ_A 1L5A_A 2JUG_A 1Q9J_A.
Probab=98.09  E-value=5.3e-06  Score=80.76  Aligned_cols=221  Identities=18%  Similarity=0.213  Sum_probs=115.5

Q ss_pred             HHHHHHHHHHHHhhccccCcEEEecCCCCcEEEecC-C--CeeEEEEeccc-ccccccCCCCChhhhccc-CCC-CCCCC
Q 012180           63 VDVLKKAMAEALVSYYALAGEVVYNYDGEPELLCNN-R--GVDFVEAYAEV-ELRDLNLYNPDESIEGKL-LPK-KKKNG  136 (469)
Q Consensus        63 ~~~L~~sL~~~L~~~p~LaGrl~~~~~G~~~i~~~~-~--gv~~~~a~~~~-~l~~l~~~~p~~~~~~~l-~P~-~~~~p  136 (469)
                      .+.|++|+.+++..+|.|-.++...+++........ .  .+......... +-.+..     ......+ -|. ....|
T Consensus        41 ~~~l~~A~~~~~~~h~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~p  115 (301)
T PF00668_consen   41 IERLRQALERLIARHPILRTRFEEDDGFEPYQRVLESSSIEIEYIDVSSDSDSEEEIL-----ELIEQELNRPFDLSEGP  115 (301)
T ss_dssp             HHHHHHHHHHHHHH-GGGGEEEEECTTCSSEEEEESEEETTCEEEECCTS-HHHHHHH-----HHHHHHHCC---TCTSB
T ss_pred             hHHHhhhhHhhhhhhhhhhheeeeecccccceeeeeccccccccccccccccchhhhh-----hhhhhhhhhcccccccc
Confidence            799999999999999999999998765343333322 1  22222111000 000100     0001111 111 12358


Q ss_pred             eeEEEEeEEecCeEEEEccccccccccccHHHHHHHHHHHHhcCC--CCC-CCCcCc-c-ccCC-CCCCCC--CCccccc
Q 012180          137 LLSVQATELKCGGIVVACTLDHRIADAYSTNMFLVSWAEIAQSKP--MSV-LPSFRR-S-ILNP-RRPLCI--DHAFDDM  208 (469)
Q Consensus       137 ll~vQvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg~~--~~~-~P~~dr-~-~l~~-~~~p~~--~~~~~~~  208 (469)
                      ++.+.+.....++..|.+.+||.++||.|+..|++.+.+++.|..  ... .+.+.. . .... ......  ...+|..
T Consensus       116 l~~~~l~~~~~~~~~l~~~~hH~i~Dg~S~~~l~~~l~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~  195 (301)
T PF00668_consen  116 LFRFTLIRTSDDEYFLLISFHHIICDGWSLNILLRELLQAYAGLSNPLPAPSPSYKDFVEFQREYRNSDRLQEARAFWRE  195 (301)
T ss_dssp             SEEEEEEEEETTEEEEEEEEEGGG--HHHHHHHHHHHHHHHHHHHTT----S-BHHHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred             hhhccccccccccchhcccccccccccccchhhhhhhHHhhhcccccccccccccccccccccccccccccccccccccc
Confidence            888888777666999999999999999999999999999998754  111 111110 0 0000 000000  0001111


Q ss_pred             cCCCCCCCC-CCCCCCCCCccCC--CCceEEEEEeCHHHHHHHHHHccCCCCCCChhHHHHHHHHHHHHhhCCCCCCCCC
Q 012180          209 YLPISSLPP-PPPPNNTPEEANG--NNLISRIYYIKSEQLNELQLLASSDECKRTKLESFSAYLWKMVALSGNDNDGSGT  285 (469)
Q Consensus       209 ~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~St~d~l~A~lW~~~~~Ar~~~~~~~~  285 (469)
                      +..  ..+. ...+.. ......  .......+.++.+..++|++.+...  .+|.++++.|.+-..+.+--.      .
T Consensus       196 ~l~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~--~~t~~~~l~aa~~~~l~~~~~------~  264 (301)
T PF00668_consen  196 YLR--GVPPAPSLPPD-FPRPSIPSYSPSRISFSLSSELSKRLKEFAKQY--GVTPFAVLLAAFALALSRLTG------Q  264 (301)
T ss_dssp             HCC--TS-----CTTT-T--CSSBEEBEEEEEEE--HHHHHHHHHHHHHT--TS-HHHHHHHHHHHHHHHHHT------T
T ss_pred             ccc--ccccccccccc-cccccccccccccccccccchhhhhhhhhhhhh--cccchhhhhhhhhhhhhhccc------c
Confidence            110  0010 000000 000011  1224678888999999999888764  489999988876666665532      3


Q ss_pred             ceEEEEEEEeCCCC
Q 012180          286 RISKMGVVVDGRTR  299 (469)
Q Consensus       286 ~~~~l~~~vd~R~r  299 (469)
                      ....+.++++.|.+
T Consensus       265 ~~~~i~~~~~~R~~  278 (301)
T PF00668_consen  265 DDVVIGTPVSGRPR  278 (301)
T ss_dssp             SEEEEEEEE---TT
T ss_pred             ceeeecccccCCCC
Confidence            57899999999999


No 11 
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=97.53  E-value=0.0025  Score=75.46  Aligned_cols=257  Identities=16%  Similarity=0.095  Sum_probs=137.7

Q ss_pred             HHHHHHHHHHHHhhccccCcEEEecCCCCc-EEEecCCCeeEEEEecccccccccC-CCCChhh----hcc-cCCCC-CC
Q 012180           63 VDVLKKAMAEALVSYYALAGEVVYNYDGEP-ELLCNNRGVDFVEAYAEVELRDLNL-YNPDESI----EGK-LLPKK-KK  134 (469)
Q Consensus        63 ~~~L~~sL~~~L~~~p~LaGrl~~~~~G~~-~i~~~~~gv~~~~a~~~~~l~~l~~-~~p~~~~----~~~-l~P~~-~~  134 (469)
                      .+.|++||..++.+++.|--++... +|.+ .+......+..      ..+.|+.. ..+....    ... -.|.. ..
T Consensus        44 ~~~l~~Al~~lv~rh~~LRt~f~~~-~g~~~q~v~~~~~~~~------~~~~d~~~~~~~~~~~~~~~~~~~~~~fdl~~  116 (1296)
T PRK10252         44 APLLARAVVAGLAEADTLRMRFTED-NGEVWQWVDPALTFPL------PEIIDLRTQPDPHAAAQALMQADLQQDLRVDS  116 (1296)
T ss_pred             HHHHHHHHHHHHHhccceEEEEEcC-CCeEEEEECCCCCCCc------CceeecCCCCCHHHHHHHHHHHHhcCCcCCCC
Confidence            7999999999999999999888754 3443 22211111110      01112211 0111111    011 11222 23


Q ss_pred             -CCeeEEEEeEEecCeEEEEccccccccccccHHHHHHHHHHHHh----cCCCCCCCCcCc--------cccCCCCCCCC
Q 012180          135 -NGLLSVQATELKCGGIVVACTLDHRIADAYSTNMFLVSWAEIAQ----SKPMSVLPSFRR--------SILNPRRPLCI  201 (469)
Q Consensus       135 -~pll~vQvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r----g~~~~~~P~~dr--------~~l~~~~~p~~  201 (469)
                       .|++++.+.+...+...|.+.+||.++||.|+..+++.++++++    |.+....|..+-        .......- .-
T Consensus       117 ~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  195 (1296)
T PRK10252        117 GKPLVFHQLIQLGDNRWYWYQRYHHLLVDGFSFPAITRRIAAIYCAWLRGEPTPASPFTPFADVVEEYQRYRASEAW-QR  195 (1296)
T ss_pred             CCCCeEEEEEEEcCCEEEEEEecCceeEccccHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHHHHHHHHhhCchh-hH
Confidence             48999999888778899999999999999999999999999886    333222221100        00110000 00


Q ss_pred             CCccccccCCCCCCCCC-CCCCCCC-CccCCCCceEEEEEeCHHHHHHHHHHccCCCCCCChhHHHHHHHHHHHHhhCCC
Q 012180          202 DHAFDDMYLPISSLPPP-PPPNNTP-EEANGNNLISRIYYIKSEQLNELQLLASSDECKRTKLESFSAYLWKMVALSGND  279 (469)
Q Consensus       202 ~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~St~d~l~A~lW~~~~~Ar~~  279 (469)
                      +..+|.++-  ...+.. ..+.... ............+.++.+..++|++.+.    .+|++.++.|.+-..+.+--. 
T Consensus       196 ~~~yW~~~L--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~l~aa~~~lL~r~sg-  268 (1296)
T PRK10252        196 DAAFWAEQR--RQLPPPASLSPAPLPGRSASADILRLKLEFTDGAFRQLAAQAS----GVQRPDLALALVALWLGRLCG-  268 (1296)
T ss_pred             HHHHHHHHh--cCCCCcccCCCCCCCCccCCCcceeeeeecCHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHHHhC-
Confidence            001222211  111110 0000000 0001123344567789999999988654    267788888765555444332 


Q ss_pred             CCCCCCceEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCccccccccccccchhhhhcCcHHHHHHHHHHHHHhc
Q 012180          280 NDGSGTRISKMGVVVDGRTRLSSSKGDHVNKSISMDSYFGNVLSVPFGGQKVNELIEKPLSWVAKRVHDFLENA  353 (469)
Q Consensus       280 ~~~~~~~~~~l~~~vd~R~rl~~~~~~~~~~pplp~~y~GN~~~~~~~~~~~~~l~~~~L~~~A~~ir~~i~~~  353 (469)
                           .....+.+++..|..-.           + .+..|-.+-.........  .+.++.+++..+++.+.+.
T Consensus       269 -----~~dv~ig~p~sgR~~~~-----------~-~~~vG~fvntlplr~~~~--~~~tf~~~l~~~~~~~~~~  323 (1296)
T PRK10252        269 -----RMDYAAGFIFMRRLGSA-----------A-LTATGPVLNVLPLRVHIA--AQETLPELATRLAAQLKKM  323 (1296)
T ss_pred             -----CCceEEEEEecCCCchh-----------h-hcCCCcccceEEEEEecC--CCCCHHHHHHHHHHHHHHH
Confidence                 34688899999886533           1 233444333222222222  1357888888888877653


No 12 
>PRK12467 peptide synthase; Provisional
Probab=97.46  E-value=0.0036  Score=81.47  Aligned_cols=260  Identities=13%  Similarity=0.062  Sum_probs=143.1

Q ss_pred             HHHHHHHHHHHHhhccccCcEEEecCC-CC-cEEEecCCCeeEEEEecccccccccCCCCChhhhccc------CCCC-C
Q 012180           63 VDVLKKAMAEALVSYYALAGEVVYNYD-GE-PELLCNNRGVDFVEAYAEVELRDLNLYNPDESIEGKL------LPKK-K  133 (469)
Q Consensus        63 ~~~L~~sL~~~L~~~p~LaGrl~~~~~-G~-~~i~~~~~gv~~~~a~~~~~l~~l~~~~p~~~~~~~l------~P~~-~  133 (469)
                      +++|++|+.+++.+++.|--++...++ |. ..+......+.+.+..       +............+      -|.. .
T Consensus      2682 ~~~l~~A~~~vv~rH~~LRT~f~~~~~~~~~~Qvv~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~fdl~ 2754 (3956)
T PRK12467       2682 VERFRTAWQAVIDRHEILRSGFLWDGELEEPLQVVYKQARLPFSRLD-------WRDRADLEQALDALAAADRQQGFDLL 2754 (3956)
T ss_pred             HHHHHHHHHHHHHHhhhhheEEEecCCCCCceEEEcccccCceeEee-------cccchhHHHHHHHHHHhhhhcCCCCC
Confidence            799999999999999999998876542 22 2332222222222111       10000000000000      1111 2


Q ss_pred             CCCeeEEEEeEEecCeEEEEccccccccccccHHHHHHHHHHHHhcCCCCCCCCcCccc---cCCCCCCCCCCccccccC
Q 012180          134 KNGLLSVQATELKCGGIVVACTLDHRIADAYSTNMFLVSWAEIAQSKPMSVLPSFRRSI---LNPRRPLCIDHAFDDMYL  210 (469)
Q Consensus       134 ~~pll~vQvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~P~~dr~~---l~~~~~p~~~~~~~~~~~  210 (469)
                      ..|++++.+.+...+...+-+.+||.++||.|+..+++.+.+.++|......+..-++.   +...+. .....+|.++ 
T Consensus      2755 ~~pl~R~~l~~~~~~~~~l~l~~HHii~DGwS~~~l~~el~~~Y~~~~~~~~~~~y~dy~~~~~~~~~-~~~~~yW~~~- 2832 (3956)
T PRK12467       2755 SAPLLRLTLVRTGEDRHHLIYTNHHILMDGWSGSQLLGEVLQRYFGQPPPAREGRYRDYIAWLQAQDA-EASEAFWKEQ- 2832 (3956)
T ss_pred             CCcceEEEEEEEcCcEEEEEEecCceeEcCccHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcccH-HHHHHHHHHH-
Confidence            47899888887767788899999999999999999999999999876432222111111   111110 0000122221 


Q ss_pred             CCCCCCCCC-CCCC-C-CCccCCCCceEEEEEeCHHHHHHHHHHccCCCCCCChhHHHHHHHHHHHHhhCCCCCCCCCce
Q 012180          211 PISSLPPPP-PPNN-T-PEEANGNNLISRIYYIKSEQLNELQLLASSDECKRTKLESFSAYLWKMVALSGNDNDGSGTRI  287 (469)
Q Consensus       211 ~~~~~~~~~-~~~~-~-~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~St~d~l~A~lW~~~~~Ar~~~~~~~~~~  287 (469)
                       +..++.+. .+.. . .............+.++.+..++|++.+...+  +|.+.++.|. |..+...-.     ....
T Consensus      2833 -L~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~~--vT~~~v~~aA-wa~~L~~~t-----g~~d 2903 (3956)
T PRK12467       2833 -LAALEEPTRLARALYPAPAEAVAGHGAHYLHLDATQTRQLIEFARRHR--VTLNTLVQGA-WLLLLQRFT-----GQDT 2903 (3956)
T ss_pred             -hcCCCcccccccccCCCccccccCcceEEEEcCHHHHHHHHHHHHHhC--CCHHHHHHHH-HHHHHHHhc-----CCCC
Confidence             11111100 0000 0 00011122345567899999999999998754  8888888775 665553322     3456


Q ss_pred             EEEEEEEeCCCCCCCCCCCCCCCCCCCCCCccccccccccccchhhhhcCcHHHHHHHHHHHHHh
Q 012180          288 SKMGVVVDGRTRLSSSKGDHVNKSISMDSYFGNVLSVPFGGQKVNELIEKPLSWVAKRVHDFLEN  352 (469)
Q Consensus       288 ~~l~~~vd~R~rl~~~~~~~~~~pplp~~y~GN~~~~~~~~~~~~~l~~~~L~~~A~~ir~~i~~  352 (469)
                      +.+..++.+|..--         +.+ ++-.|-.+-.....+...  .+.++.++..++++...+
T Consensus      2904 v~fG~~vsGR~~~~---------~~~-e~~vG~fintlp~r~~~~--~~~~~~~~l~~v~~~~~~ 2956 (3956)
T PRK12467       2904 VCFGATVAGRPAQL---------RGA-EQQLGLFINTLPVIASPR--AEQTVSDWLQQVQAQNLA 2956 (3956)
T ss_pred             EEEEeeeCCCCCCc---------cCh-hhheeeeeeceeEEEecC--CCCCHHHHHHHHHHHHHH
Confidence            88999999996532         112 344554443332233322  146788888888876544


No 13 
>PRK12467 peptide synthase; Provisional
Probab=97.42  E-value=0.0019  Score=83.93  Aligned_cols=257  Identities=18%  Similarity=0.170  Sum_probs=141.8

Q ss_pred             HHHHHHHHHHHHhhccccCcEEEecCCCCcE-EEecCCCeeEEEEecccccccccCC---CCChhh---hc--ccCCCC-
Q 012180           63 VDVLKKAMAEALVSYYALAGEVVYNYDGEPE-LLCNNRGVDFVEAYAEVELRDLNLY---NPDESI---EG--KLLPKK-  132 (469)
Q Consensus        63 ~~~L~~sL~~~L~~~p~LaGrl~~~~~G~~~-i~~~~~gv~~~~a~~~~~l~~l~~~---~p~~~~---~~--~l~P~~-  132 (469)
                      .+.|++++.+++..++.|--++...+ |.+. +......+.+.       +.++...   .....+   ..  .--|.. 
T Consensus        86 ~~~L~~A~~~vv~rH~~LRt~f~~~~-~~~~q~v~~~~~~~i~-------~~d~~~~~~~~~~~~~~~~~~~~~~~~fdL  157 (3956)
T PRK12467         86 VSALRRAFDALVARHESLRTRFVQDE-EGFRQVIDASLSLTIP-------LDDLANEQGRARESQIEAYINEEVARPFDL  157 (3956)
T ss_pred             HHHHHHHHHHHHHHhhhheEEEEecC-CeEEEEEcCCCCCcee-------EEecccCChhhHHHHHHHHHHHHhcCCCCC
Confidence            79999999999999999999997544 4332 22122111221       1122100   000001   00  112222 


Q ss_pred             CCCCeeEEEEeEEecCeEEEEccccccccccccHHHHHHHHHHHHh----cCCCC--CCCC-------cCccccCCCCCC
Q 012180          133 KKNGLLSVQATELKCGGIVVACTLDHRIADAYSTNMFLVSWAEIAQ----SKPMS--VLPS-------FRRSILNPRRPL  199 (469)
Q Consensus       133 ~~~pll~vQvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r----g~~~~--~~P~-------~dr~~l~~~~~p  199 (469)
                      ...|++++.+.+...+...+.+.+||.++||.|+..+++.+++++.    |.+..  ..|.       +.+..+....-.
T Consensus       158 ~~~pl~r~~l~~~~~~~~~l~l~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~~~~~~~~~~y~dy~~~~~~~l~~~~~~  237 (3956)
T PRK12467        158 ANGPLLRVRLLRLADDEHVLVVTLHHIISDGWSMRVLVEELVQLYSAYSQGREPSLPALPIQYADYAIWQRSWLEAGERE  237 (3956)
T ss_pred             CCCCceEEEEEEECCCcEEEEEecCeeeEccchHHHHHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhcChhhH
Confidence            2478998888777667889999999999999999999999999875    32221  1121       111111110000


Q ss_pred             CCCCccccccCCCCCCCCC-CCCCCCC-CccCCCCceEEEEEeCHHHHHHHHHHccCCCCCCChhHHHHHHHHHHHHhhC
Q 012180          200 CIDHAFDDMYLPISSLPPP-PPPNNTP-EEANGNNLISRIYYIKSEQLNELQLLASSDECKRTKLESFSAYLWKMVALSG  277 (469)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~St~d~l~A~lW~~~~~Ar  277 (469)
                      . +..+|.++-  ...++. ..+.... ............+.++++..++|++.|...  .+|.+.++.|.+...+.|-.
T Consensus       238 ~-~~~yW~~~L--~~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~--g~T~~~vl~aA~a~lL~r~t  312 (3956)
T PRK12467        238 R-QLAYWQEQL--GGEHTVLELPTDRPRPAVPSYRGARLRVDLPQALSAGLKALAQRE--GVTLFMVLLASFQTLLHRYS  312 (3956)
T ss_pred             H-HHHHHHHHh--ccCCCcCCCCCCCCCCCCCCcCceeEEEeCCHHHHHHHHHHHHHh--CCCHHHHHHHHHHHHHHHhc
Confidence            0 001222211  000000 0000000 000112335667889999999999999875  48999998886554444443


Q ss_pred             CCCCCCCCceEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCccccccccccccchhhhhcCcHHHHHHHHHHHHHh
Q 012180          278 NDNDGSGTRISKMGVVVDGRTRLSSSKGDHVNKSISMDSYFGNVLSVPFGGQKVNELIEKPLSWVAKRVHDFLEN  352 (469)
Q Consensus       278 ~~~~~~~~~~~~l~~~vd~R~rl~~~~~~~~~~pplp~~y~GN~~~~~~~~~~~~~l~~~~L~~~A~~ir~~i~~  352 (469)
                            ......+.+++..|.+-..         .---++|-|.+-.   .+.++  .+.++.++..++++.+.+
T Consensus       313 ------g~~dv~iG~pvsgR~~~~~---------~~~iG~fiNtlpl---rv~~~--~~~t~~~ll~~v~~~~~~  367 (3956)
T PRK12467        313 ------GQSDIRIGVPNANRNRVET---------ERLIGFFVNTQVL---KAEVD--PQASFLELLQQVKRTALG  367 (3956)
T ss_pred             ------CCCCEEEEeccCCCCchhh---------hcceeeeeeeeee---EeecC--CCCCHHHHHHHHHHHHHH
Confidence                  2456889999999976431         0112455554332   22222  135688888888877655


No 14 
>PRK12316 peptide synthase; Provisional
Probab=97.34  E-value=0.0027  Score=84.26  Aligned_cols=258  Identities=16%  Similarity=0.151  Sum_probs=142.7

Q ss_pred             HHHHHHHHHHHHhhccccCcEEEecCCCCcEEEecCCCeeEEEEecccccccccCCC-CC--hhhhc-----ccCCCC-C
Q 012180           63 VDVLKKAMAEALVSYYALAGEVVYNYDGEPELLCNNRGVDFVEAYAEVELRDLNLYN-PD--ESIEG-----KLLPKK-K  133 (469)
Q Consensus        63 ~~~L~~sL~~~L~~~p~LaGrl~~~~~G~~~i~~~~~gv~~~~a~~~~~l~~l~~~~-p~--~~~~~-----~l~P~~-~  133 (469)
                      ++.|++++.+++.+++.|-.++....++..........+.+.+.       |+.... ..  ..+..     .--|.. .
T Consensus        86 ~~~l~~A~~~vv~rHe~LRt~f~~~~~~~~q~v~~~~~~~~~~~-------d~~~~~~~~~~~~~~~~~~~~~~~pfdl~  158 (5163)
T PRK12316         86 RQALERAFASLVQRHETLRTVFPRGADDSLAQVPLDRPLEVEFE-------DCSGLPEAEQEARLRDEAQRESLQPFDLC  158 (5163)
T ss_pred             HHHHHHHHHHHHHHhhhceEEEEeeCCeEEEEECCCCCCCccEE-------ECCCCChhhHHHHHHHHHHHhhcCCCCCC
Confidence            79999999999999999999997654322222112222222211       111000 00  00000     012322 2


Q ss_pred             CCCeeEEEEeEEecCeEEEEccccccccccccHHHHHHHHHHHHhc----CCCCC--CCC-------cCccccCCCCCCC
Q 012180          134 KNGLLSVQATELKCGGIVVACTLDHRIADAYSTNMFLVSWAEIAQS----KPMSV--LPS-------FRRSILNPRRPLC  200 (469)
Q Consensus       134 ~~pll~vQvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg----~~~~~--~P~-------~dr~~l~~~~~p~  200 (469)
                      ..|++++.+.+...+...+.+.+||.++||.|+..|++.+++++++    .+...  .|.       +.+..+..... .
T Consensus       159 ~~pl~r~~l~~~~~~~~~l~l~~HHii~Dg~S~~~l~~el~~~Y~~~~~~~~~~l~~~~~~y~dy~~~q~~~~~~~~~-~  237 (5163)
T PRK12316        159 EGPLLRVRLLRLGEEEHVLLLTLHHIVSDGWSMNVLIEEFSRFYSAYATGAEPGLPALPIQYADYALWQRSWLEAGEQ-E  237 (5163)
T ss_pred             CCCceEEEEEEECCCcEEEEEcccceeechhHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhcChhH-H
Confidence            4788888887776678899999999999999999999999999874    22111  111       11111111000 0


Q ss_pred             CCCccccccCCCCCCCCC-CCCCCCC-CccCCCCceEEEEEeCHHHHHHHHHHccCCCCCCChhHHHHHHHHHHHHhhCC
Q 012180          201 IDHAFDDMYLPISSLPPP-PPPNNTP-EEANGNNLISRIYYIKSEQLNELQLLASSDECKRTKLESFSAYLWKMVALSGN  278 (469)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~St~d~l~A~lW~~~~~Ar~  278 (469)
                      ....+|...  +....+. ..+.... ............+.++.+..++|++.|...  .+|.+.++.|.+...+.+-- 
T Consensus       238 ~~~~yW~~~--l~~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~--~~T~~~~llaa~a~lL~~~t-  312 (5163)
T PRK12316        238 RQLEYWRAQ--LGEEHPVLELPTDHPRPAVPSYRGSRYEFSIDPALAEALRGTARRQ--GLTLFMLLLGAFNVLLHRYS-  312 (5163)
T ss_pred             HHHHHHHHH--hCCCCccccCCCCCCCCCCCCcCCeeEEEecCHHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHhc-
Confidence            000011111  0000000 0010000 001122355678899999999999999875  48999999887655555443 


Q ss_pred             CCCCCCCceEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCccccccccccccchhhhhcCcHHHHHHHHHHHHHh
Q 012180          279 DNDGSGTRISKMGVVVDGRTRLSSSKGDHVNKSISMDSYFGNVLSVPFGGQKVNELIEKPLSWVAKRVHDFLEN  352 (469)
Q Consensus       279 ~~~~~~~~~~~l~~~vd~R~rl~~~~~~~~~~pplp~~y~GN~~~~~~~~~~~~~l~~~~L~~~A~~ir~~i~~  352 (469)
                           ..+...+.+++..|..-..         .---+||=|.+..   .....  .+.++.++...+++.+.+
T Consensus       313 -----g~~dv~ig~pvs~R~~~~~---------~~~vG~f~n~lpl---r~~~~--~~~tf~~~l~~v~~~~~~  367 (5163)
T PRK12316        313 -----GQTDIRVGVPIANRNRAEV---------EGLIGFFVNTQVL---RSVFD--GRTRVATLLAGVKDTVLG  367 (5163)
T ss_pred             -----CCCCeEEEeeeCCCCchhh---------hcceeeeeeeEEE---EEecC--CCCCHHHHHHHHHHHHHH
Confidence                 2456888999999965331         0112444444332   22222  135688888888887655


No 15 
>PRK12316 peptide synthase; Provisional
Probab=97.20  E-value=0.0044  Score=82.34  Aligned_cols=261  Identities=15%  Similarity=0.156  Sum_probs=140.2

Q ss_pred             HHHHHHHHHHHHhhccccCcEEEecCCCCcEEEecCCCeeEEEEec-ccccccccCCCCChhhhccc-CCCC-CCCCeeE
Q 012180           63 VDVLKKAMAEALVSYYALAGEVVYNYDGEPELLCNNRGVDFVEAYA-EVELRDLNLYNPDESIEGKL-LPKK-KKNGLLS  139 (469)
Q Consensus        63 ~~~L~~sL~~~L~~~p~LaGrl~~~~~G~~~i~~~~~gv~~~~a~~-~~~l~~l~~~~p~~~~~~~l-~P~~-~~~pll~  139 (469)
                      .+.|++++..++..++.|--++....++...+........+..... +..-+++.     ..+.... .|.. ...|+++
T Consensus      2639 ~~~L~~A~~~lv~rH~~LRt~f~~~~~~~~q~v~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~fdl~~~pl~r 2713 (5163)
T PRK12316       2639 QAALEQAFDALVLRHETLRTRFVEVGEQTRQVILPNMSLRIVLEDCAGVADAAIR-----QRVAEEIQRPFDLARGPLLR 2713 (5163)
T ss_pred             HHHHHHHHHHHHHHhhHhhcceeeeCCeEEEEECCCCCccceeeccccCCHHHHH-----HHHHHHhhCCCCCCCCCcEE
Confidence            7999999999999999999998765433233322222111111110 00000000     0000111 1211 2468888


Q ss_pred             EEEeEEecCeEEEEccccccccccccHHHHHHHHHHHHhc----CCCC--CCCC-c------CccccCCCCCCCCCCccc
Q 012180          140 VQATELKCGGIVVACTLDHRIADAYSTNMFLVSWAEIAQS----KPMS--VLPS-F------RRSILNPRRPLCIDHAFD  206 (469)
Q Consensus       140 vQvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg----~~~~--~~P~-~------dr~~l~~~~~p~~~~~~~  206 (469)
                      +.+.....+...+.+.+||.++||.|+..+++.+.+++++    .+..  ..|. +      .+..+..... .....+|
T Consensus      2714 ~~l~~~~~~~~~l~l~~HHii~DG~S~~~l~~eL~~~Y~~~~~g~~~~l~~~~~~y~dy~~~~~~~~~~~~~-~~~~~yW 2792 (5163)
T PRK12316       2714 VRLLALDGQEHVLVITQHHIVSDGWSMQVMVDELVQAYAGARRGEQPTLPPLPLQYADYAAWQRAWMDSGEG-ARQLDYW 2792 (5163)
T ss_pred             EEEEEECCCeEEEEEecCcCcccHhHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhcCchH-HHHHHHH
Confidence            8887666567888999999999999999999999999875    2221  1121 0      1111111000 0000122


Q ss_pred             cccCCCCCCCC-CCCCCCCC-CccCCCCceEEEEEeCHHHHHHHHHHccCCCCCCChhHHHHHHHHHHHHhhCCCCCCCC
Q 012180          207 DMYLPISSLPP-PPPPNNTP-EEANGNNLISRIYYIKSEQLNELQLLASSDECKRTKLESFSAYLWKMVALSGNDNDGSG  284 (469)
Q Consensus       207 ~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~St~d~l~A~lW~~~~~Ar~~~~~~~  284 (469)
                      .++-  ....+ ...+.... ............+.++.+..++|++.+...+  +|.+.++.|.+...+.+--      .
T Consensus      2793 ~~~L--~~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~~--vT~~~~l~aA~a~~L~r~t------g 2862 (5163)
T PRK12316       2793 RERL--GGEQPVLELPLDRPRPALQSHRGARLDVALDVALSRELLALARREG--VTLFMLLLASFQVLLHRYS------G 2862 (5163)
T ss_pred             HHHh--cCCCCcccCCccCCCCccCCCCCceEEEECCHHHHHHHHHHHHHhC--CCHHHHHHHHHHHHHHHhc------C
Confidence            2111  00000 00010000 0011223455678899999999999988754  8999998886544444332      2


Q ss_pred             CceEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCccccccccccccchhhhhcCcHHHHHHHHHHHHHhc
Q 012180          285 TRISKMGVVVDGRTRLSSSKGDHVNKSISMDSYFGNVLSVPFGGQKVNELIEKPLSWVAKRVHDFLENA  353 (469)
Q Consensus       285 ~~~~~l~~~vd~R~rl~~~~~~~~~~pplp~~y~GN~~~~~~~~~~~~~l~~~~L~~~A~~ir~~i~~~  353 (469)
                      .....+.++++.|..-.           + .+.+|-.+-.....+...  .+.++.+++..+++.+.+.
T Consensus      2863 ~~dv~iG~pvsgR~~~~-----------~-~~~iG~fvntlPlrv~l~--~~~t~~~ll~~v~~~~~~~ 2917 (5163)
T PRK12316       2863 QSDIRVGVPIANRNRAE-----------T-ERLIGFFVNTQVLRAQVD--AQLAFRDLLGQVKEQALGA 2917 (5163)
T ss_pred             CCceEEEeeecCCCchh-----------H-HhhhhheecceeEEEecC--CCCCHHHHHHHHHHHHHHH
Confidence            45688999999995432           2 233343333222222222  2357888888888776553


No 16 
>PRK05691 peptide synthase; Validated
Probab=96.91  E-value=0.014  Score=77.00  Aligned_cols=260  Identities=14%  Similarity=0.174  Sum_probs=138.9

Q ss_pred             HHHHHHHHHHHHhhccccCcEEEecCCCCc-EEEecCCCeeEEEEecccccccccCCCCChh---hh-cc-cCCCC-CCC
Q 012180           63 VDVLKKAMAEALVSYYALAGEVVYNYDGEP-ELLCNNRGVDFVEAYAEVELRDLNLYNPDES---IE-GK-LLPKK-KKN  135 (469)
Q Consensus        63 ~~~L~~sL~~~L~~~p~LaGrl~~~~~G~~-~i~~~~~gv~~~~a~~~~~l~~l~~~~p~~~---~~-~~-l~P~~-~~~  135 (469)
                      ++.|++|+.+++.+++.|--++...+ |.. ........+.+...+.    .++........   +. .. -.|.. ...
T Consensus      1765 ~~~L~~A~~~lv~rH~~LRT~f~~~~-~~~~q~v~~~~~~~~~~~d~----~~~~~~~~~~~~~~~~~~~~~~~fdl~~~ 1839 (4334)
T PRK05691       1765 VDRFEAALQALILRHETLRTTFPSVD-GVPVQQVAEDSGLRMDWQDF----SALPADARQQRLQQLADSEAHQPFDLERG 1839 (4334)
T ss_pred             HHHHHHHHHHHHHhCCcceEEEEccC-CeEEEEECCCCCCCeeEeec----cCCChHhHHHHHHHHHHHHHhcCCCCCCC
Confidence            79999999999999999999987543 432 2222222222222111    01100000000   00 00 11221 246


Q ss_pred             CeeEEEEeEEecCeEEEEccccccccccccHHHHHHHHHHHHhc----CCCCCC--CC-c-C-----ccccCCCCCCCCC
Q 012180          136 GLLSVQATELKCGGIVVACTLDHRIADAYSTNMFLVSWAEIAQS----KPMSVL--PS-F-R-----RSILNPRRPLCID  202 (469)
Q Consensus       136 pll~vQvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg----~~~~~~--P~-~-d-----r~~l~~~~~p~~~  202 (469)
                      |++++.+.....+...+-+.+||.++||.|+..+++.+.+++++    .+....  |. + |     +..+...+-.. .
T Consensus      1840 pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~ll~~el~~~Y~~~~~~~~~~~~~~~~~y~dy~~~~~~~l~~~~~~~-~ 1918 (4334)
T PRK05691       1840 PLLRACLVKAAEREHYFVLTLHHIVTEGWAMDIFARELGALYEAFLDDRESPLEPLPVQYLDYSVWQRQWLESGERQR-Q 1918 (4334)
T ss_pred             ceeEEEEEEeCCCcEEEEEecchhhhhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhcChhhHH-H
Confidence            88888877665567889999999999999999999999998863    222111  21 1 1     11111100000 0


Q ss_pred             CccccccCCCCCCCCC-CCCCCCCC-ccCCCCceEEEEEeCHHHHHHHHHHccCCCCCCChhHHHHHHHHHHHHhhCCCC
Q 012180          203 HAFDDMYLPISSLPPP-PPPNNTPE-EANGNNLISRIYYIKSEQLNELQLLASSDECKRTKLESFSAYLWKMVALSGNDN  280 (469)
Q Consensus       203 ~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~St~d~l~A~lW~~~~~Ar~~~  280 (469)
                      ..+|.++-  ....+. ..+..... ...........+.++.+..++|++.+...  .+|.+.++.|.+-..+.+--   
T Consensus      1919 ~~yW~~~L--~~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~--~vT~~~~l~aA~a~lL~r~s--- 1991 (4334)
T PRK05691       1919 LDYWKAQL--GNEHPLLELPADRPRPPVQSHRGELYRFDLSPELAARVRAFNAQR--GLTLFMTMTATLAALLYRYS--- 1991 (4334)
T ss_pred             HHHHHHHh--cCCCCcccCCCCCCCCcccCcCceEEEEECCHHHHHHHHHHHHHh--CCCHHHHHHHHHHHHHHHhc---
Confidence            01122111  000000 00000000 00112334567788999999999998775  47888887775444444332   


Q ss_pred             CCCCCceEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCccccccccccccchhhhhcCcHHHHHHHHHHHHHh
Q 012180          281 DGSGTRISKMGVVVDGRTRLSSSKGDHVNKSISMDSYFGNVLSVPFGGQKVNELIEKPLSWVAKRVHDFLEN  352 (469)
Q Consensus       281 ~~~~~~~~~l~~~vd~R~rl~~~~~~~~~~pplp~~y~GN~~~~~~~~~~~~~l~~~~L~~~A~~ir~~i~~  352 (469)
                         ......+.+++..|..-.           + .+-+|-++-.....+...  .+.++.++...+++.+.+
T Consensus      1992 ---g~~dvv~G~~vsgR~~~~-----------~-~~~vG~fvntlPlrv~~~--~~~t~~~ll~~v~~~~~~ 2046 (4334)
T PRK05691       1992 ---GQRDLRIGAPVANRIRPE-----------S-EGLIGAFLNTQVLRCQLD--GQMSVSELLEQVRQTVIE 2046 (4334)
T ss_pred             ---CCCCeEEEecccCCCchh-----------h-hcceeeeeeeeeEEeecC--CCCCHHHHHHHHHHHHHH
Confidence               245688899999996432           2 344554444333333332  135678888888877655


No 17 
>PRK05691 peptide synthase; Validated
Probab=96.70  E-value=0.021  Score=75.25  Aligned_cols=258  Identities=16%  Similarity=0.164  Sum_probs=137.3

Q ss_pred             HHHHHHHHHHHHhhccccCcEEEecCCCCcEEEec-CCCeeEEEEecccccccccCCCCChhh---hc--ccCCCC-CCC
Q 012180           63 VDVLKKAMAEALVSYYALAGEVVYNYDGEPELLCN-NRGVDFVEAYAEVELRDLNLYNPDESI---EG--KLLPKK-KKN  135 (469)
Q Consensus        63 ~~~L~~sL~~~L~~~p~LaGrl~~~~~G~~~i~~~-~~gv~~~~a~~~~~l~~l~~~~p~~~~---~~--~l~P~~-~~~  135 (469)
                      .+.|++++..++.+++.|--++.... |....... ...+.+.+.+    +.++........+   ..  ...|.. ...
T Consensus       712 ~~~l~~A~~~lv~rh~~LRt~f~~~~-~~~~q~v~~~~~~~~~~~d----~~~~~~~~~~~~~~~~~~~~~~~~fdl~~~  786 (4334)
T PRK05691        712 EAALRASFQRLVERHESLRTRFYERD-GVALQRIDAQGEFALQRID----LSDLPEAEREARAAQIREEEARQPFDLEKG  786 (4334)
T ss_pred             HHHHHHHHHHHHHHhhhhcEEEEccC-CeEEEEECCCCCCcceEEe----CCCCChHHHHHHHHHHHHHHhcCCCCCCCC
Confidence            79999999999999999999987433 43322222 2112221111    1111000000000   00  012221 247


Q ss_pred             CeeEEEEeEEecCeEEEEccccccccccccHHHHHHHHHHHHhc----CCCCCCCC---c-C-----ccccCCCCCCCCC
Q 012180          136 GLLSVQATELKCGGIVVACTLDHRIADAYSTNMFLVSWAEIAQS----KPMSVLPS---F-R-----RSILNPRRPLCID  202 (469)
Q Consensus       136 pll~vQvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg----~~~~~~P~---~-d-----r~~l~~~~~p~~~  202 (469)
                      |++++.+.....+...|-+.+||.++||.|+..+++.+++.+++    .+....|.   + |     +..+....- ...
T Consensus       787 pl~R~~l~~~~~~~~~l~l~~HHii~DG~S~~ll~~el~~~Y~~~~~g~~~~l~~~~~~y~dy~~~~~~~l~~~~~-~~~  865 (4334)
T PRK05691        787 PLLRVTLVRLDDEEHQLLVTLHHIVADGWSLNILLDEFSRLYAAACQGQTAELAPLPLGYADYGAWQRQWLAQGEA-ARQ  865 (4334)
T ss_pred             CceEEEEEEEcCCeEEEEEeeCceeeccchHHHHHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhcChhH-HHH
Confidence            89988888776678899999999999999999999999998863    32211111   1 1     111111000 000


Q ss_pred             CccccccCCCCCCCCC-CCCCCCC-CccCCCCceEEEEEeCHHHHHHHHHHccCCCCCCChhHHHHHHHHHHHHhhCCCC
Q 012180          203 HAFDDMYLPISSLPPP-PPPNNTP-EEANGNNLISRIYYIKSEQLNELQLLASSDECKRTKLESFSAYLWKMVALSGNDN  280 (469)
Q Consensus       203 ~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~St~d~l~A~lW~~~~~Ar~~~  280 (469)
                      ..+|.++-  ....+. ..+.... ............+.++.+..++|++.|+..  .+|.+.++.|.+...+.+--   
T Consensus       866 ~~yW~~~L--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~--gvT~~~vl~aa~allL~ryt---  938 (4334)
T PRK05691        866 LAYWKAQL--GDEQPVLELATDHPRSARQAHSAARYSLRVDASLSEALRGLAQAH--QATLFMVLLAAFQALLHRYS---  938 (4334)
T ss_pred             HHHHHHHh--CCCCCccCCCCCCCCCccCCcCceEEEEeCCHHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHHh---
Confidence            01122111  000000 0000000 001112345567889999999999998875  48888888876444444332   


Q ss_pred             CCCCCceEEEEEEEeCCCCCCCCCCCCCCCCCCC--CCCccccccccccccchhhhhcCcHHHHHHHHHHHHHh
Q 012180          281 DGSGTRISKMGVVVDGRTRLSSSKGDHVNKSISM--DSYFGNVLSVPFGGQKVNELIEKPLSWVAKRVHDFLEN  352 (469)
Q Consensus       281 ~~~~~~~~~l~~~vd~R~rl~~~~~~~~~~pplp--~~y~GN~~~~~~~~~~~~~l~~~~L~~~A~~ir~~i~~  352 (469)
                         ......+.+++..|..-+           +-  -++|=|.+-   ......  .+.++.++...+++.+.+
T Consensus       939 ---g~~dv~~G~~~sgR~~~~-----------~~~~vG~fintlp---lr~~~~--~~~t~~~ll~~v~~~~~~  993 (4334)
T PRK05691        939 ---GQGDIRIGVPNANRPRLE-----------TQGLVGFFINTQV---LRAQLD--GRLPFTALLAQVRQATLG  993 (4334)
T ss_pred             ---CCCCEEEEecccCCCchh-----------hhcceeeeeeeee---EEEecC--CCCCHHHHHHHHHHHHHH
Confidence               245678888888885422           21  133334332   222222  135688888888877655


No 18 
>PF03007 WES_acyltransf:  Wax ester synthase-like Acyl-CoA acyltransferase domain;  InterPro: IPR004255 This entry represents the N terminus (approximately 170 residues) of a number of hypothetical plant proteins. O-acyltransferase WSD1 is a bifunctional wax ester synthase/diacylglycerol acyltransferase, which is involved in cuticular wax biosynthesis [].; GO: 0004144 diacylglycerol O-acyltransferase activity
Probab=96.09  E-value=0.04  Score=53.25  Aligned_cols=137  Identities=20%  Similarity=0.275  Sum_probs=79.7

Q ss_pred             CCcccCcC-------CceeeEEEEEEcCCCCCCCCCCCcHHHHHHHHHHHHHhhccccCcEEEecCC--CCcEEE-ecCC
Q 012180           30 LSNLDLLL-------PAIDFGVFFCYKKPTAADFGSFGSTVDVLKKAMAEALVSYYALAGEVVYNYD--GEPELL-CNNR   99 (469)
Q Consensus        30 LS~lD~~~-------~~~~~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~--G~~~i~-~~~~   99 (469)
                      ||+.|..+       ..+++..+++|..+...   .....++.|++.+...+..+|.|.-|++..+.  |++... ..+-
T Consensus         1 Ls~~Da~fl~~e~~~~pmhv~~~~~~~~~~~~---~~~~~~~~l~~~~~~r~~~~p~fr~rv~~~~~~~~~p~W~~d~~f   77 (263)
T PF03007_consen    1 LSPLDAAFLYMETPSNPMHVGALAIFDPPTDG---APPLDVERLRARLEARLARHPRFRQRVVRVPFGLGRPRWVEDPDF   77 (263)
T ss_pred             CChHHHHHHhcCCCCCCceEEEEEEEEcCCCC---CCcchHHHHHHHHHHhhccCCccccceecCCCCCCCEEEEECCCC
Confidence            56666541       24566777888776321   11224789999999999999999999987652  443322 1111


Q ss_pred             CeeEEEEe--c--ccccccccCCCCChhhhcccC--CCCCCCCeeEEEEeE-EecCeEEEEccccccccccccHHHHHHH
Q 012180          100 GVDFVEAY--A--EVELRDLNLYNPDESIEGKLL--PKKKKNGLLSVQATE-LKCGGIVVACTLDHRIADAYSTNMFLVS  172 (469)
Q Consensus       100 gv~~~~a~--~--~~~l~~l~~~~p~~~~~~~l~--P~~~~~pll~vQvt~-f~~GG~~l~~~~~H~v~Dg~~~~~fl~~  172 (469)
                      -+...+..  .  ..+.++|.      .+...+.  |.....|+=.+.+-. +..|+++|.+.+||+++||.+...++..
T Consensus        78 Dl~~Hv~~~~l~~pg~~~~l~------~~v~~l~~~pLd~~rPlWe~~li~g~~~g~~Al~~k~HHal~DG~~~~~l~~~  151 (263)
T PF03007_consen   78 DLDYHVRRVALPAPGDRAELQ------ALVSRLASTPLDRSRPLWEVHLIEGLEGGRFALVLKVHHALADGVSLMRLLAA  151 (263)
T ss_pred             ChHHceEEecCCCCCCHHHHH------HHHHHHhcCCCCCCCCCcEEEEEecCCCCcEEEEEeehhhhhhhHhHHHHHHH
Confidence            11111111  1  01111111      0112221  333346765555433 3456789999999999999999998877


Q ss_pred             HHH
Q 012180          173 WAE  175 (469)
Q Consensus       173 wa~  175 (469)
                      +..
T Consensus       152 l~~  154 (263)
T PF03007_consen  152 LLD  154 (263)
T ss_pred             HhC
Confidence            744


No 19 
>PRK13757 chloramphenicol acetyltransferase; Provisional
Probab=63.98  E-value=5.8  Score=37.14  Aligned_cols=29  Identities=14%  Similarity=0.334  Sum_probs=26.2

Q ss_pred             EEEEccccccccccccHHHHHHHHHHHHh
Q 012180          150 IVVACTLDHRIADAYSTNMFLVSWAEIAQ  178 (469)
Q Consensus       150 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r  178 (469)
                      +-|++.+||+++||.=++.|++.+.+.+.
T Consensus       185 mPvSvqvHHa~~DG~Hv~~F~~~lQ~~~~  213 (219)
T PRK13757        185 MPLAIQVHHAVCDGFHVGRMLNELQQYCD  213 (219)
T ss_pred             EEEEEEEehhccchHHHHHHHHHHHHHHH
Confidence            78899999999999999999999987763


No 20 
>PF00302 CAT:  Chloramphenicol acetyltransferase;  InterPro: IPR001707 Chloramphenicol acetyltransferase (CAT) (2.3.1.28 from EC) [] catalyzes the acetyl-CoA dependent acetylation of chloramphenicol (Cm), an antibiotic which inhibits prokaryotic peptidyltransferase activity. Acetylation of Cm by CAT inactivates the antibiotic. A histidine residue, located in the C-terminal section of the enzyme, plays a central role in its catalytic mechanism. There is a second family of CAT [], evolutionary unrelated to the main family described above. These CAT belong to the bacterial hexapeptide-repeat containing-transferases family (see IPR001451 from INTERPRO). The crystal structure of the type III enzyme from Escherichia coli with chloramphenicol bound has been determined. CAT is a trimer of identical subunits (monomer Mr 25,000) and the trimeric structure is stabilised by a number of hydrogen bonds, some of which result in the extension of a beta-sheet across the subunit interface. Chloramphenicol binds in a deep pocket located at the boundary between adjacent subunits of the trimer, such that the majority of residues forming the binding pocket belong to one subunit while the catalytically essential histidine belongs to the adjacent subunit. His195 is appropriately positioned to act as a general base catalyst in the reaction, and the required tautomeric stabilisation is provided by an unusual interaction with a main-chain carbonyl oxygen [].; GO: 0008811 chloramphenicol O-acetyltransferase activity; PDB: 1CIA_A 4CLA_A 1QCA_A 2CLA_A 1CLA_A 3CLA_A 3U9F_K 1PD5_F 1Q23_F 3U9B_F ....
Probab=61.16  E-value=6  Score=36.69  Aligned_cols=37  Identities=16%  Similarity=0.279  Sum_probs=24.9

Q ss_pred             CCeeEE-EEeEEecCe---EEEEccccccccccccHHHHHHHH
Q 012180          135 NGLLSV-QATELKCGG---IVVACTLDHRIADAYSTNMFLVSW  173 (469)
Q Consensus       135 ~pll~v-Qvt~f~~GG---~~l~~~~~H~v~Dg~~~~~fl~~w  173 (469)
                      .|.+.. |.+  ..||   +-|++.+||+++||.=++.|++.+
T Consensus       165 ~P~it~GK~~--~~~gr~~mPvsiqvhHa~~DG~Hv~~F~~~l  205 (206)
T PF00302_consen  165 IPRITWGKYF--EENGRLLMPVSIQVHHALVDGYHVGQFFEEL  205 (206)
T ss_dssp             S-EEEEE--E--EETTEEEEEEEEEEETTT--HHHHHHHHHHH
T ss_pred             ccEEEeeeeE--eECCEEEEEEEEEEecccccHHHHHHHHHHh
Confidence            566544 222  2356   889999999999999999999865


No 21 
>PF07428 Tri3:  15-O-acetyltransferase Tri3;  InterPro: IPR009992 This family represents a conserved region approximately 400 residues long within 15-O-acetyltransferase (Tri3), which seems to be restricted to ascomycete fungi. In Fusarium sporotrichioides, this is required for acetylation of the C-15 hydroxyl group of trichothecenes in the biosynthesis of T-2 toxin [].; PDB: 3FP0_A 3FOT_A.
Probab=57.99  E-value=29  Score=34.50  Aligned_cols=88  Identities=13%  Similarity=-0.015  Sum_probs=46.0

Q ss_pred             CceEEEEEeCHHHHHHHHHHccCC-CCCCChhHHHHHHHHHHHHhhCCCCCCCCCceEEEEEEEeCCCCCCCCCCCCCCC
Q 012180          232 NLISRIYYIKSEQLNELQLLASSD-ECKRTKLESFSAYLWKMVALSGNDNDGSGTRISKMGVVVDGRTRLSSSKGDHVNK  310 (469)
Q Consensus       232 ~~~~~~f~~~~~~l~~Lk~~~~~~-~~~~St~d~l~A~lW~~~~~Ar~~~~~~~~~~~~l~~~vd~R~rl~~~~~~~~~~  310 (469)
                      .-++-+..|+.++=.+|++.++.. +...|..-...|-+--++.+-...+..+.++..-.-++||+|++|.         
T Consensus       267 lpr~~i~~fs~~eS~Ai~k~vKt~~gP~~TisHL~qAAvllALL~~~~P~d~~D~~~~isp~~v~GRR~Lr---------  337 (413)
T PF07428_consen  267 LPRCIIHSFSAEESIAIKKAVKTRLGPKYTISHLGQAAVLLALLRDLKPTDLPDSQAFISPMPVNGRRWLR---------  337 (413)
T ss_dssp             -EEEEEEE--HHHHHHHHHHHHHHT-TT--HHHHHHHHHHHHHHHH-------TT--EEEEEEEE-GGGB----------
T ss_pred             CcceecccCChhhhHHHHHHHhcccCCCcCHHHHHHHHHHHHHHhccCCCCCCCcceEecccccCcchhcc---------
Confidence            345667788999988888887643 2456666555555444555554322222234456678999999998         


Q ss_pred             CCCCCCCccccccccccc
Q 012180          311 SISMDSYFGNVLSVPFGG  328 (469)
Q Consensus       311 pplp~~y~GN~~~~~~~~  328 (469)
                      +.+-.+|++-|...+.+.
T Consensus       338 ~~~a~~~Y~~cqt~a~V~  355 (413)
T PF07428_consen  338 PKIAKNYYAICQTAAVVR  355 (413)
T ss_dssp             HHHHTS--S--EEEEEEE
T ss_pred             cchhhhhhhhhhccceEE
Confidence            567789999887766553


No 22 
>PRK11856 branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed
Probab=48.46  E-value=13  Score=38.25  Aligned_cols=29  Identities=24%  Similarity=0.479  Sum_probs=26.8

Q ss_pred             EEEEccccccccccccHHHHHHHHHHHHh
Q 012180          150 IVVACTLDHRIADAYSTNMFLVSWAEIAQ  178 (469)
Q Consensus       150 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r  178 (469)
                      +-|++++||.+.||.-...|++.+.++.-
T Consensus       375 m~lslt~DHRviDG~~aa~Fl~~l~~~le  403 (411)
T PRK11856        375 MPLSLSFDHRVIDGADAARFLKALKELLE  403 (411)
T ss_pred             EEEeEEeehhhcCcHHHHHHHHHHHHHHh
Confidence            67999999999999999999999988763


No 23 
>PRK11855 dihydrolipoamide acetyltransferase; Reviewed
Probab=41.97  E-value=20  Score=38.60  Aligned_cols=29  Identities=17%  Similarity=0.327  Sum_probs=26.5

Q ss_pred             EEEEccccccccccccHHHHHHHHHHHHh
Q 012180          150 IVVACTLDHRIADAYSTNMFLVSWAEIAQ  178 (469)
Q Consensus       150 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r  178 (469)
                      +-|++++||.+.||.-...||+.|.+..-
T Consensus       512 m~lslt~DHRviDG~~aa~Fl~~l~~~le  540 (547)
T PRK11855        512 LPLSLSYDHRVIDGATAARFTNYLKQLLA  540 (547)
T ss_pred             EEEeEEccchhcCcHHHHHHHHHHHHHHh
Confidence            56999999999999999999999988763


No 24 
>PF00198 2-oxoacid_dh:  2-oxoacid dehydrogenases acyltransferase (catalytic domain);  InterPro: IPR001078 This domain is found in the lipoamide acyltransferase component of the branched-chain alpha-keto acid dehydrogenase complex 2.3.1 from EC, which catalyses the overall conversion of alpha-keto acids to acyl-CoA and carbon dioxide []. It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). The domain is also found in the dihydrolipoamide succinyltransferase component of the 2-oxoglutarate dehydrogenase complex 2.3.1.61 from EC. These proteins contain one to three copies of a lipoyl binding domain followed by the catalytic domain.; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1EAF_A 1EAA_A 1DPD_A 1EAE_A 1DPC_A 1EAB_A 1DPB_A 1EAC_A 1EAD_A 2II5_H ....
Probab=31.89  E-value=38  Score=31.94  Aligned_cols=30  Identities=27%  Similarity=0.423  Sum_probs=26.2

Q ss_pred             eEEEEccccccccccccHHHHHHHHHHHHh
Q 012180          149 GIVVACTLDHRIADAYSTNMFLVSWAEIAQ  178 (469)
Q Consensus       149 G~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r  178 (469)
                      -+-|++++.|-+.||.-...|++.+.+...
T Consensus       195 ~~~lslt~DHRvidG~~aa~Fl~~l~~~le  224 (231)
T PF00198_consen  195 VMNLSLTFDHRVIDGAEAARFLKDLKELLE  224 (231)
T ss_dssp             EEEEEEEEETTTS-HHHHHHHHHHHHHHHH
T ss_pred             EEEeEEeccceEEcHHHHHHHHHHHHHHHh
Confidence            467899999999999999999999998764


No 25 
>PRK11854 aceF pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated
Probab=29.31  E-value=40  Score=36.96  Aligned_cols=29  Identities=17%  Similarity=0.314  Sum_probs=26.3

Q ss_pred             EEEEccccccccccccHHHHHHHHHHHHh
Q 012180          150 IVVACTLDHRIADAYSTNMFLVSWAEIAQ  178 (469)
Q Consensus       150 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r  178 (469)
                      +-|+++++|.+.||.-...|++.|.+..-
T Consensus       598 m~lslt~DHRviDGa~aa~Fl~~lk~~LE  626 (633)
T PRK11854        598 LPLSLSYDHRVIDGADGARFITIINDRLS  626 (633)
T ss_pred             EEEeEEccchhcchHHHHHHHHHHHHHHh
Confidence            44999999999999999999999988764


No 26 
>PRK11857 dihydrolipoamide acetyltransferase; Reviewed
Probab=28.84  E-value=44  Score=32.99  Aligned_cols=29  Identities=21%  Similarity=0.303  Sum_probs=26.5

Q ss_pred             EEEEccccccccccccHHHHHHHHHHHHh
Q 012180          150 IVVACTLDHRIADAYSTNMFLVSWAEIAQ  178 (469)
Q Consensus       150 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r  178 (469)
                      +-|++++.|-+.||.-...|++.|.+...
T Consensus       270 m~lslt~DHRviDGa~aa~Fl~~lk~~LE  298 (306)
T PRK11857        270 MHLTVAADHRWIDGATIGRFASRVKELLE  298 (306)
T ss_pred             eEEeEecchhhhCcHHHHHHHHHHHHHhc
Confidence            45899999999999999999999998875


No 27 
>TIGR01349 PDHac_trf_mito pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form. This model represents one of several closely related clades of the dihydrolipoamide acetyltransferase subunit of the pyruvate dehydrogenase complex. It includes sequences from mitochondria and from alpha and beta branches of the proteobacteria, as well as from some other bacteria. Sequences from Gram-positive bacteria are not included. The non-enzymatic homolog protein X, which serves as an E3 component binding protein, falls within the clade phylogenetically but is rejected by its low score.
Probab=28.31  E-value=44  Score=34.76  Aligned_cols=29  Identities=28%  Similarity=0.415  Sum_probs=26.6

Q ss_pred             EEEEccccccccccccHHHHHHHHHHHHh
Q 012180          150 IVVACTLDHRIADAYSTNMFLVSWAEIAQ  178 (469)
Q Consensus       150 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r  178 (469)
                      +-|++++.|-+.||.-...|++.|.++..
T Consensus       400 m~lsls~DHRviDGa~aa~Fl~~lk~~lE  428 (435)
T TIGR01349       400 MSVTLSCDHRVIDGAVGAEFLKSFKKYLE  428 (435)
T ss_pred             EEEeEeecchhhCcHHHHHHHHHHHHHHh
Confidence            56999999999999999999999998774


No 28 
>PRK14843 dihydrolipoamide acetyltransferase; Provisional
Probab=26.90  E-value=50  Score=33.28  Aligned_cols=29  Identities=24%  Similarity=0.510  Sum_probs=26.3

Q ss_pred             EEEEccccccccccccHHHHHHHHHHHHh
Q 012180          150 IVVACTLDHRIADAYSTNMFLVSWAEIAQ  178 (469)
Q Consensus       150 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r  178 (469)
                      +-|++++.|-+.||.-...|++.|.+...
T Consensus       312 m~lsls~DHRviDGa~aa~Fl~~lk~~lE  340 (347)
T PRK14843        312 MSLGLTIDHRVVDGMAGAKFMKDLKELIE  340 (347)
T ss_pred             EEEEEecchhhhCcHHHHHHHHHHHHHhc
Confidence            45899999999999999999999988764


No 29 
>PLN02528 2-oxoisovalerate dehydrogenase E2 component
Probab=26.84  E-value=50  Score=34.14  Aligned_cols=29  Identities=24%  Similarity=0.478  Sum_probs=26.5

Q ss_pred             EEEEccccccccccccHHHHHHHHHHHHh
Q 012180          150 IVVACTLDHRIADAYSTNMFLVSWAEIAQ  178 (469)
Q Consensus       150 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r  178 (469)
                      +-|++++.|-+.||.-...||+.|.+...
T Consensus       378 m~lslt~DHRviDGa~aa~Fl~~lk~~le  406 (416)
T PLN02528        378 MTVTIGADHRVLDGATVARFCNEWKSYVE  406 (416)
T ss_pred             EEEeEeccchhcCcHHHHHHHHHHHHHHh
Confidence            55999999999999999999999998774


No 30 
>COG4845 Chloramphenicol O-acetyltransferase [Defense mechanisms]
Probab=25.77  E-value=65  Score=29.59  Aligned_cols=45  Identities=9%  Similarity=0.093  Sum_probs=32.2

Q ss_pred             CCCeeEEEEeEEecCe--EEEEccccccccccccHHHHHHHHHHHHh
Q 012180          134 KNGLLSVQATELKCGG--IVVACTLDHRIADAYSTNMFLVSWAEIAQ  178 (469)
Q Consensus       134 ~~pll~vQvt~f~~GG--~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r  178 (469)
                      .+|.+..==-.-.+|-  +-|++..||+.+||.=+.+|++.+.....
T Consensus       166 ~~PiF~~Grf~~~~Gkl~lPlavq~hHA~vDG~Hi~~l~~~lQ~~~~  212 (219)
T COG4845         166 GQPIFYAGRFYEEDGKLTLPLAVQAHHANVDGFHIGQLFDQLQTLFS  212 (219)
T ss_pred             cceeEeecceeccCCeEEEeEEEEecccccchhhHHHHHHHHHHHhc
Confidence            4676654322122343  45788899999999999999999887765


No 31 
>PTZ00144 dihydrolipoamide succinyltransferase; Provisional
Probab=25.29  E-value=55  Score=33.84  Aligned_cols=30  Identities=27%  Similarity=0.388  Sum_probs=27.1

Q ss_pred             eEEEEccccccccccccHHHHHHHHHHHHh
Q 012180          149 GIVVACTLDHRIADAYSTNMFLVSWAEIAQ  178 (469)
Q Consensus       149 G~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r  178 (469)
                      .+-|++++.|-+.||.-...|++.|.+..-
T Consensus       380 ~m~lsLs~DHRviDGa~AA~FL~~lk~~LE  409 (418)
T PTZ00144        380 IMYLALTYDHRLIDGRDAVTFLKKIKDLIE  409 (418)
T ss_pred             EEEEEEecchhhhChHHHHHHHHHHHHHhc
Confidence            467999999999999999999999988764


No 32 
>TIGR01347 sucB 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component). dihydrolipoamide acetyltransferase. The seed for this model includes mitochondrial and Gram-negative bacterial forms. Mycobacterial candidates are highly derived, differ in having and extra copy of the lipoyl-binding domain at the N-terminus. They score below the trusted cutoff, but above the noise cutoff and above all examples of dihydrolipoamide acetyltransferase.
Probab=23.36  E-value=63  Score=33.30  Aligned_cols=29  Identities=31%  Similarity=0.515  Sum_probs=26.5

Q ss_pred             EEEEccccccccccccHHHHHHHHHHHHh
Q 012180          150 IVVACTLDHRIADAYSTNMFLVSWAEIAQ  178 (469)
Q Consensus       150 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r  178 (469)
                      +-|++++.|-+.||.-...|++.+.++..
T Consensus       366 m~lsLt~DHRviDGa~aa~Fl~~l~~~le  394 (403)
T TIGR01347       366 MYLALSYDHRLIDGKEAVTFLVTIKELLE  394 (403)
T ss_pred             EEEEEEecchhhChHHHHHHHHHHHHHhc
Confidence            45999999999999999999999998874


No 33 
>PRK05704 dihydrolipoamide succinyltransferase; Validated
Probab=22.79  E-value=67  Score=33.16  Aligned_cols=29  Identities=34%  Similarity=0.495  Sum_probs=26.3

Q ss_pred             EEEEccccccccccccHHHHHHHHHHHHh
Q 012180          150 IVVACTLDHRIADAYSTNMFLVSWAEIAQ  178 (469)
Q Consensus       150 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r  178 (469)
                      +-|++++.|-+.||.....|++.|.++..
T Consensus       370 ~~lsls~DHRviDGa~aa~Fl~~l~~~le  398 (407)
T PRK05704        370 MYLALSYDHRIIDGKEAVGFLVTIKELLE  398 (407)
T ss_pred             EEEEEEechhhhCcHHHHHHHHHHHHHhh
Confidence            45899999999999999999999998774


No 34 
>TIGR02927 SucB_Actino 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase. This model represents an Actinobacterial clade of E2 enzyme, a component of the 2-oxoglutarate dehydrogenase complex involved in the TCA cycle. These proteins have multiple domains including the catalytic domain (pfam00198), one or two biotin domains (pfam00364) and an E3-component binding domain (pfam02817).
Probab=22.51  E-value=65  Score=34.99  Aligned_cols=30  Identities=20%  Similarity=0.316  Sum_probs=27.1

Q ss_pred             EEEEccccccccccccHHHHHHHHHHHHhc
Q 012180          150 IVVACTLDHRIADAYSTNMFLVSWAEIAQS  179 (469)
Q Consensus       150 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg  179 (469)
                      +-|++++.|-+.||.....|++.|.++.-.
T Consensus       552 m~lsls~DHRviDGa~aa~Fl~~lk~~LE~  581 (590)
T TIGR02927       552 CHLPLTYDHQLIDGADAGRFLTTIKDRLEE  581 (590)
T ss_pred             EEEeeeccchhcCcHHHHHHHHHHHHHHhC
Confidence            349999999999999999999999998853


No 35 
>PLN02226 2-oxoglutarate dehydrogenase E2 component
Probab=22.19  E-value=68  Score=33.61  Aligned_cols=30  Identities=30%  Similarity=0.415  Sum_probs=27.2

Q ss_pred             eEEEEccccccccccccHHHHHHHHHHHHh
Q 012180          149 GIVVACTLDHRIADAYSTNMFLVSWAEIAQ  178 (469)
Q Consensus       149 G~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r  178 (469)
                      -+-|++++.|-+.||.-...|++.|.++..
T Consensus       425 ~m~lsLs~DHRVIDGa~aA~FL~~lk~~LE  454 (463)
T PLN02226        425 MMYVALTYDHRLIDGREAVYFLRRVKDVVE  454 (463)
T ss_pred             EEEEeEecchhhhCcHHHHHHHHHHHHHhc
Confidence            367999999999999999999999998774


No 36 
>PF05660 DUF807:  Coxiella burnetii protein of unknown function (DUF807);  InterPro: IPR008525 This family consists of several proteins of unknown function from Coxiella burnetii (the causative agent of a zoonotic disease called Q fever).
Probab=20.89  E-value=43  Score=27.88  Aligned_cols=12  Identities=58%  Similarity=0.789  Sum_probs=10.2

Q ss_pred             CCCCCCCccccc
Q 012180          311 SISMDSYFGNVL  322 (469)
Q Consensus       311 pplp~~y~GN~~  322 (469)
                      |-.|++||||.-
T Consensus        16 pi~p~syfgn~g   27 (142)
T PF05660_consen   16 PIDPDSYFGNPG   27 (142)
T ss_pred             CcCchhccCCCc
Confidence            678899999974


No 37 
>TIGR01348 PDHac_trf_long pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form. This model describes a subset of pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase specifically close by both phylogenetic and per cent identity (UPGMA) trees. Members of this set include two or three copies of the lipoyl-binding domain. E. coli AceF is a member of this model, while mitochondrial and some other bacterial forms belong to a separate model.
Probab=20.28  E-value=78  Score=34.04  Aligned_cols=29  Identities=21%  Similarity=0.307  Sum_probs=26.2

Q ss_pred             EEEEccccccccccccHHHHHHHHHHHHh
Q 012180          150 IVVACTLDHRIADAYSTNMFLVSWAEIAQ  178 (469)
Q Consensus       150 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r  178 (469)
                      +-|++++.|-+.||.-...|++.|.++.-
T Consensus       511 m~ltls~DHRviDGa~aa~Fl~~~~~~le  539 (546)
T TIGR01348       511 LPLSLSYDHRVIDGADAARFTTYICESLA  539 (546)
T ss_pred             EEEeEeccchhcChHHHHHHHHHHHHHHh
Confidence            44899999999999999999999988764


Done!