Query 012180
Match_columns 469
No_of_seqs 131 out of 1290
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 04:20:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012180.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012180hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 1.7E-80 5.7E-85 642.7 42.2 423 5-454 4-435 (439)
2 2bgh_A Vinorine synthase; VS, 100.0 6.8E-72 2.3E-76 575.2 31.3 400 6-464 2-417 (421)
3 2xr7_A Malonyltransferase; xen 100.0 4.7E-72 1.6E-76 582.1 29.0 415 9-459 2-450 (453)
4 2e1v_A Acyl transferase; BAHD 100.0 3.1E-71 1.1E-75 576.0 26.8 410 7-457 5-448 (454)
5 2rkv_A Trichothecene 3-O-acety 100.0 4.4E-66 1.5E-70 537.0 33.1 409 27-468 4-451 (451)
6 1q9j_A PAPA5, polyketide synth 99.1 1.9E-08 6.7E-13 101.9 24.5 287 25-352 5-313 (422)
7 4hvm_A Tlmii; PSI-biology, mid 98.4 1.2E-06 4E-11 90.9 12.9 288 24-352 10-327 (493)
8 2jgp_A Tyrocidine synthetase 3 98.3 7.1E-05 2.4E-09 77.9 22.5 254 63-352 133-400 (520)
9 1l5a_A Amide synthase, VIBH; n 98.2 7.8E-05 2.7E-09 75.6 18.8 251 63-352 35-304 (436)
10 2vsq_A Surfactin synthetase su 98.1 0.00025 8.6E-09 82.2 22.7 261 63-354 49-329 (1304)
11 2xhg_A Tyrocidine synthetase A 98.0 0.00017 5.9E-09 73.7 18.3 291 24-352 14-335 (466)
12 3fot_A 15-O-acetyltransferase; 97.8 0.0016 5.6E-08 67.6 20.5 267 60-352 72-399 (519)
13 3cla_A Type III chloramphenico 62.9 3.9 0.00013 36.8 2.7 44 135-178 164-209 (213)
14 2i9d_A Chloramphenicol acetylt 61.7 4.3 0.00015 36.7 2.7 43 135-177 172-216 (217)
15 1q23_A Chloramphenicol acetylt 60.9 4.5 0.00015 36.6 2.7 44 135-178 168-213 (219)
16 3b8k_A PDCE2;, dihydrolipoylly 59.2 5.4 0.00018 36.5 3.0 29 150-178 204-232 (239)
17 1dpb_A Dihydrolipoyl-transacet 56.3 5.9 0.0002 36.4 2.7 29 150-178 208-236 (243)
18 1scz_A E2, dihydrolipoamide su 56.0 6 0.00021 36.1 2.7 29 150-178 196-224 (233)
19 3rqc_A Probable lipoamide acyl 55.0 5.4 0.00019 36.1 2.2 29 150-178 187-215 (224)
20 2ii3_A Lipoamide acyltransfera 54.5 6.5 0.00022 36.5 2.7 29 150-178 224-252 (262)
21 3mae_A 2-oxoisovalerate dehydr 48.2 9.5 0.00032 35.3 2.7 30 150-179 210-239 (256)
22 3l60_A Branched-chain alpha-ke 46.8 10 0.00035 34.9 2.7 29 150-178 205-233 (250)
23 2kl8_A OR15; structural genomi 44.3 31 0.001 24.2 4.1 37 62-98 11-48 (85)
24 4hhu_A OR280; engineered prote 34.4 66 0.0022 25.5 5.1 36 63-98 13-49 (170)
25 4hhu_A OR280; engineered prote 34.1 79 0.0027 25.1 5.5 36 63-98 94-130 (170)
26 1x93_A Hypothetical protein HP 33.1 52 0.0018 21.7 3.6 23 234-256 2-24 (55)
27 3dva_I Dihydrolipoyllysine-res 31.7 9.9 0.00034 38.0 0.0 29 150-178 391-419 (428)
28 2xl1_A Arginine attenuator pep 31.3 28 0.00097 19.0 1.8 18 258-275 7-24 (26)
29 2k1o_A Putative; repressor, tr 25.0 1.2E+02 0.004 20.8 4.4 41 232-278 14-54 (66)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=1.7e-80 Score=642.71 Aligned_cols=423 Identities=25% Similarity=0.428 Sum_probs=352.5
Q ss_pred ceEEEEEEeeeeEecCCCCCCCeecCCcccCcCCceeeEEEEEEcCCCCCCCCCCCcHHHHHHHHHHHHHhhccccCcEE
Q 012180 5 GDFIVTVSKKDVVAAVLPLQEHWLPLSNLDLLLPAIDFGVFFCYKKPTAADFGSFGSTVDVLKKAMAEALVSYYALAGEV 84 (469)
Q Consensus 5 ~~~~V~i~~~~~V~P~~p~~~~~~~LS~lD~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl 84 (469)
++|+|+|.++++|+|+.|++++.++||+||+++++.|+..+|||+.+... . .+.+++||+||+++|++||+|||||
T Consensus 4 ~~~~V~i~~~~~V~P~~~tp~~~~~LS~lD~~~~~~~~~~~~~y~~~~~~---~-~~~~~~Lk~sLs~~L~~f~plAGRl 79 (439)
T 4g22_A 4 GSMKIEVKESTMVRPAQETPGRNLWNSNVDLVVPNFHTPSVYFYRPTGSS---N-FFDAKVLKDALSRALVPFYPMAGRL 79 (439)
T ss_dssp --CCEEEEEEEEECCSSCCCCCEECCCHHHHSCCTTCCCEEEEECCCSCT---T-TTCHHHHHHHHHHHTTTTGGGGCEE
T ss_pred CceEEEEeeeEEEeCCCCCCCCeecCChhHhCccccceeeEEEEcCCCCc---c-ccHHHHHHHHHHHHHhhccccceee
Confidence 45889999999999999998999999999999889999999999875431 2 2458999999999999999999999
Q ss_pred EecCCCCcEEEecCCCeeEEEEecccccccccCCCCChhhhcccCCCCC------CCCeeEEEEeEEecCeEEEEccccc
Q 012180 85 VYNYDGEPELLCNNRGVDFVEAYAEVELRDLNLYNPDESIEGKLLPKKK------KNGLLSVQATELKCGGIVVACTLDH 158 (469)
Q Consensus 85 ~~~~~G~~~i~~~~~gv~~~~a~~~~~l~~l~~~~p~~~~~~~l~P~~~------~~pll~vQvt~f~~GG~~l~~~~~H 158 (469)
+.+++|+++|+|+++||.|++|+++++++|+....|... ...|+|..+ +.|+|.||||+|+|||++||+++||
T Consensus 80 ~~~~~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~p~~~-~~~l~p~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~~~H 158 (439)
T 4g22_A 80 KRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLE-LRRLIPAVDYSQGISSYALLVLQVTYFKCGGVSLGVGMRH 158 (439)
T ss_dssp EECTTSCEEEECCCCCEEEEEEEESSCGGGGTTCCCCGG-GGGGSCCCCTTSCTTSSCSEEEEEEECTTSCEEEEEEECT
T ss_pred eeCCCCCEEEEECCCCCEEEEEEcCCcHHHhcCCCCCHH-HHhcCCCCCcccccccCceeEEEEEEecCCCEEEEEEeee
Confidence 998889999999999999999999999999965445544 356777532 4699999999999999999999999
Q ss_pred cccccccHHHHHHHHHHHHhcCCCCCCCCcCccccCCCCCCCCCCccccccCCCCCCCCCCCCCCCCCccCC-CCceEEE
Q 012180 159 RIADAYSTNMFLVSWAEIAQSKPMSVLPSFRRSILNPRRPLCIDHAFDDMYLPISSLPPPPPPNNTPEEANG-NNLISRI 237 (469)
Q Consensus 159 ~v~Dg~~~~~fl~~wa~~~rg~~~~~~P~~dr~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 237 (469)
.++||.|+.+|+++||+++||.+....|++||+.+.+++||.... .+.+|.+.+........ . +... .++..++
T Consensus 159 ~v~Dg~~~~~Fl~~wa~~~rg~~~~~~P~~dr~~l~~~~pp~~~~-~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~ 233 (439)
T 4g22_A 159 HAADGFSGLHFINSWSDMARGLDVTLPPFIDRTLLRARDPPQPQF-QHIEYQPPPALAVSPQT---A-ASDSVPETAVSI 233 (439)
T ss_dssp TTCCHHHHHHHHHHHHHHHTTCCCSSCCBCCGGGGCCCSSCCCSS-CCGGGSCCC-------------------CEEEEE
T ss_pred ccCcHHHHHHHHHHHHHHhCCCCCCCCCccccccccCCCCCCCCc-CcccccCCCCCcccccc---c-ccCCcccceEEE
Confidence 999999999999999999999877778999999998888776532 34556543322111000 0 0112 5688999
Q ss_pred EEeCHHHHHHHHHHccCCC--CCCChhHHHHHHHHHHHHhhCCCCCCCCCceEEEEEEEeCCCCCCCCCCCCCCCCCCCC
Q 012180 238 YYIKSEQLNELQLLASSDE--CKRTKLESFSAYLWKMVALSGNDNDGSGTRISKMGVVVDGRTRLSSSKGDHVNKSISMD 315 (469)
Q Consensus 238 f~~~~~~l~~Lk~~~~~~~--~~~St~d~l~A~lW~~~~~Ar~~~~~~~~~~~~l~~~vd~R~rl~~~~~~~~~~pplp~ 315 (469)
|+|++++|++||+++..+. .++|++|+|+||+|+|++|||.. ++++.+.+.++||+|+|++ ||+|+
T Consensus 234 f~fs~~~i~~LK~~a~~~~~~~~~St~dal~A~iWr~~~rAr~~---~~~~~~~l~~~vd~R~rl~---------Pplp~ 301 (439)
T 4g22_A 234 FKLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGL---EVDQGTKLYIATDGRARLR---------PSLPP 301 (439)
T ss_dssp EEECHHHHHHHHHGGGGGGCCCCCCHHHHHHHHHHHHHHHHTTC---CTTCEEEEEEEEECTTTSS---------SCCCT
T ss_pred EEECHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHHHhcCC---CCCCcEEEEEEEcccCCCC---------CCCCC
Confidence 9999999999999997642 57999999999999999999976 4678999999999999999 89999
Q ss_pred CCccccccccccccchhhhhcCcHHHHHHHHHHHHHhcCChhHHhhHHHHHHhcCCCCccccccccCCCCCCcEEEeecC
Q 012180 316 SYFGNVLSVPFGGQKVNELIEKPLSWVAKRVHDFLENAVTKDHFLGLIDWVEAHRPDPAISKICATGSKDGPAFVVSSGQ 395 (469)
Q Consensus 316 ~y~GN~~~~~~~~~~~~~l~~~~L~~~A~~ir~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~ 395 (469)
+||||++.++.+.++++||.+.+|+++|.+||+++++ ++++++++.++|++..++...+.+... ...+.++++|||.
T Consensus 302 ~Y~GN~v~~~~~~~~~~el~~~~L~~~A~~Ir~ai~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~vssw~ 378 (439)
T 4g22_A 302 GYFGNVIFTATPIAIAGDLEFKPVWYAASKIHDALAR-MDNDYLRSALDYLELQPDLKALVRGAH--TFKCPNLGITSWV 378 (439)
T ss_dssp TBCSCCEEEECCEEEHHHHHHSCHHHHHHHHHHHHHT-CSHHHHHHHHHHHHTCSCSTTCCCCHH--HHCTTCEEEEECT
T ss_pred CcccceeehhhcceEHHHHhhCcHHHHHHHHHHHHHh-hCHHHHHHHHHHHHhCccchhhcccCC--cCcCCcEEEeecC
Confidence 9999999999999999999999999999999999977 899999999999987654322211110 1124689999999
Q ss_pred CCCCCccccCCCccccccccccCCCCceEEEecCCCCCCCcEEEEEeCCHHHHHHHHhc
Q 012180 396 RFPVSKVDFGWGKPVFGSYHFPWGSDAGYVMPMPSPAHNSDWVVYMHLSEKQLDLIETQ 454 (469)
Q Consensus 396 ~~~~~~~DFG~G~P~~~~~~~p~~~~~g~~~i~p~~~~~g~~~v~v~L~~~~m~~l~~~ 454 (469)
++++|++|||||||+++++.. ...+|.++++|+++++||++|.|+|++++|++|+++
T Consensus 379 r~~~y~~DFGwGkP~~~~~~~--~~~~g~~~~~p~~~~~ggi~v~v~L~~~~m~~f~~~ 435 (439)
T 4g22_A 379 RLPIHDADFGWGRPIFMGPGG--IAYEGLSFILPSPTNDGSMSVAISLQGEHMKLFQSF 435 (439)
T ss_dssp TSCTTCCCCSSCCCSEEEESS--CCSTTEEEEEECTTCSSCEEEEEEEEHHHHHHHHHH
T ss_pred cCCccccccCCCCcceeeccc--cCCCcEEEEeecCCCCCcEEEEEECCHHHHHHHHHH
Confidence 999999999999999887522 235788999999878899999999999999999984
No 2
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=6.8e-72 Score=575.25 Aligned_cols=400 Identities=20% Similarity=0.314 Sum_probs=325.7
Q ss_pred eEEEEEEeeeeEecCCCCCC--CeecCCcccCcCCceeeEEEEEEcCCCCCCCCCCCcHHHHHHHHHHHHHhhccccCcE
Q 012180 6 DFIVTVSKKDVVAAVLPLQE--HWLPLSNLDLLLPAIDFGVFFCYKKPTAADFGSFGSTVDVLKKAMAEALVSYYALAGE 83 (469)
Q Consensus 6 ~~~V~i~~~~~V~P~~p~~~--~~~~LS~lD~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGr 83 (469)
.|.|+|.++++|+|+.|++. +.++||+||+++++.|+..+|||+.+... ..+++.++++||+||+++|++||+||||
T Consensus 2 ~m~v~v~~~~~V~P~~ptp~~~~~~~LS~lD~~~~~~~~~~~~~y~~~~~~-~~~~~~~~~~Lk~sLs~~L~~~~plAGR 80 (421)
T 2bgh_A 2 APQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDS-NLDPAQTSQHLKQSLSKVLTHFYPLAGR 80 (421)
T ss_dssp --CEEEEEEEEEECSSCCCTTSCCCBCCHHHHTSCSSEEEEEEEECCCSSC-CCCHHHHHHHHHHHHHHHTTTSGGGGSE
T ss_pred CceEEEeeeEEEeCCCCCCCCCcccCCChHHhcccccccceEEEEeCCCcc-ccchhhHHHHHHHHHHHHhhhcchhccc
Confidence 47899999999999998764 59999999998888999999999875421 0123457999999999999999999999
Q ss_pred EEecCCCCcEEEecCCCeeEEEEecccccccccCCCCChhhhcccCCCC---------CCCCeeEEEEeEEecCeEEEEc
Q 012180 84 VVYNYDGEPELLCNNRGVDFVEAYAEVELRDLNLYNPDESIEGKLLPKK---------KKNGLLSVQATELKCGGIVVAC 154 (469)
Q Consensus 84 l~~~~~G~~~i~~~~~gv~~~~a~~~~~l~~l~~~~p~~~~~~~l~P~~---------~~~pll~vQvt~f~~GG~~l~~ 154 (469)
|+. +++|+|+++||.|++|+++++++|+....|+....+.|+|.. .+.|++.+|||+|+|||++||+
T Consensus 81 l~~----~~~i~c~~~Gv~fv~A~~d~~l~~~~~~~p~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvt~f~cgG~~lg~ 156 (421)
T 2bgh_A 81 INV----NSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQYLPSAAYPGGKIEVNEDVPLAVKISFFECGGTAIGV 156 (421)
T ss_dssp EET----TTEEECCCCCEEEEEEEESSCHHHHHSCCSSGGGGGGGSSSCSSSSSSSCCCTTCSEEEEEEECTTSCEEEEE
T ss_pred cCC----CcEEEEcCCceEEEEEEEcCCHHHHhccCCChHHHHhcCCCCCCccccccccCCceEEEEEEEEcCCCEEEEE
Confidence 962 589999999999999999999999864435543345677643 2479999999999999999999
Q ss_pred cccccccccccHHHHHHHHHHHHhcCCCCCCCCcCc-cccCCC--CCCCCCCccccccCCCCCCCCCCCCCCCCCccCCC
Q 012180 155 TLDHRIADAYSTNMFLVSWAEIAQSKPMSVLPSFRR-SILNPR--RPLCIDHAFDDMYLPISSLPPPPPPNNTPEEANGN 231 (469)
Q Consensus 155 ~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~P~~dr-~~l~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (469)
++||.++||.|+.+|+++||+++||.+....|.+|| +.+.+. ++|. + . .....
T Consensus 157 ~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~P~~dr~~~l~p~~~~~~~----------~------~--------~~~~~ 212 (421)
T 2bgh_A 157 NLSHKIADVLSLATFLNAWTATCRGETEIVLPNFDLAARHFPPVDNTPS----------P------E--------LVPDE 212 (421)
T ss_dssp EEETTTCCHHHHHHHHHHHHHHHTTCSCCCCCBCSHHHHHSCCCTTCCC----------C------C--------CCCCS
T ss_pred EeeEEechHHHHHHHHHHHHHHhcCCCCCCCCccccccccCCCcccCCC----------C------c--------cCCcc
Confidence 999999999999999999999999875446788998 655421 1110 0 0 01234
Q ss_pred CceEEEEEeCHHHHHHHHHHccCCC--CCCChhHHHHHHHHHHHHhhCCCCCCCCCceEEEEEEEeCCCCCCCCCCCCCC
Q 012180 232 NLISRIYYIKSEQLNELQLLASSDE--CKRTKLESFSAYLWKMVALSGNDNDGSGTRISKMGVVVDGRTRLSSSKGDHVN 309 (469)
Q Consensus 232 ~~~~~~f~~~~~~l~~Lk~~~~~~~--~~~St~d~l~A~lW~~~~~Ar~~~~~~~~~~~~l~~~vd~R~rl~~~~~~~~~ 309 (469)
++..++|+|++++|++||+++.++. .++|++|+|+||+|+|+++||... .++++.+.+.++||+|+|+.
T Consensus 213 ~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~St~d~l~A~iW~~~~~Ar~~~-~~~~~~~~l~~~vd~R~rl~-------- 283 (421)
T 2bgh_A 213 NVVMKRFVFDKEKIGALRAQASSASEEKNFSRVQLVVAYIWKHVIDVTRAK-YGAKNKFVVVQAVNLRSRMN-------- 283 (421)
T ss_dssp SEEEEEEEECHHHHHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHHH-SCCCSCEEEEEEEESGGGSS--------
T ss_pred ceEEEEEEECHHHHHHHHHHhhccCCCCCCchhHhHHHHHHHHHHHHhccc-CCCCCceEEEEEecCccccC--------
Confidence 6789999999999999999997643 579999999999999999998641 13467899999999999999
Q ss_pred CCCCCCCCccccccccccccchhhhhcCcHHHHHHHHHHHHHhcCChhHHhhHHHHHHhcCCCCccccccccCCCCCCcE
Q 012180 310 KSISMDSYFGNVLSVPFGGQKVNELIEKPLSWVAKRVHDFLENAVTKDHFLGLIDWVEAHRPDPAISKICATGSKDGPAF 389 (469)
Q Consensus 310 ~pplp~~y~GN~~~~~~~~~~~~~l~~~~L~~~A~~ir~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (469)
||+|++||||++..+.+.+++++ +.+|+++|.+||+++++ ++++++++..++.+..... + ....+
T Consensus 284 -pplP~~y~GN~~~~~~~~~~~~~--~~~l~~~a~~ir~ai~~-~~~~~~~~~~~~~~~~~~~---------~--~~~~~ 348 (421)
T 2bgh_A 284 -PPLPHYAMGNIATLLFAAVDAEW--DKDFPDLIGPLRTSLEK-TEDDHNHELLKGMTCLYEL---------E--PQELL 348 (421)
T ss_dssp -SCCCTTBCSCCEEEEEEEECTTC--CCCGGGGHHHHHHHTCC-CSSCHHHHHHHHHHHHHTS---------C--GGGEE
T ss_pred -CCCCCCccceEEEEEEEEecccc--cccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhcc---------C--CCCeE
Confidence 89999999999999888888876 78999999999999976 8999999888776542110 0 12368
Q ss_pred EEeecCCCCCCccccCCCccccccccccCCCCceEEEecCCCCCCCcEEEEEeCCHHHHHHHHhccccccccccc
Q 012180 390 VVSSGQRFPVSKVDFGWGKPVFGSYHFPWGSDAGYVMPMPSPAHNSDWVVYMHLSEKQLDLIETQASNVFEPLTF 464 (469)
Q Consensus 390 ~~ssw~~~~~~~~DFG~G~P~~~~~~~p~~~~~g~~~i~p~~~~~g~~~v~v~L~~~~m~~l~~~d~~~~~~~~~ 464 (469)
.+|||.++++|++|||||+|+++++. ....+|+++++|+++++ |++|.|+|++++|++|++ ||++|.+.
T Consensus 349 ~vssw~~~~~y~~DFGwGkP~~v~~~--~~~~~g~~~~~p~~~~~-gi~v~v~L~~~~m~~f~~---e~~~~~~~ 417 (421)
T 2bgh_A 349 SFTSWCRLGFYDLDFGWGKPLSACTT--TFPKRNAALLMDTRSGD-GVEAWLPMAEDEMAMLPV---ELLSLVDS 417 (421)
T ss_dssp EEEEETTSCGGGCCSSSCCCSEEECC--CCCSTTEEEEEECTTSS-SEEEEEEEEHHHHHHSCH---HHHTTBCC
T ss_pred EEeccccCCCcccccCCCccCeeccc--ccCcCCEEEEEecCCCC-eEEEEEEcCHHHHHHHHH---HHHHhhcC
Confidence 99999999999999999999998752 22357889999987654 699999999999999997 79998653
No 3
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=4.7e-72 Score=582.10 Aligned_cols=415 Identities=18% Similarity=0.278 Sum_probs=328.2
Q ss_pred EEEEeeeeEecCCC-CCCCeecCCcccCc-CCceeeEEEEEEcCCCCCCCCC--CCcHHHHHHHHHHHHHhhccccCcEE
Q 012180 9 VTVSKKDVVAAVLP-LQEHWLPLSNLDLL-LPAIDFGVFFCYKKPTAADFGS--FGSTVDVLKKAMAEALVSYYALAGEV 84 (469)
Q Consensus 9 V~i~~~~~V~P~~p-~~~~~~~LS~lD~~-~~~~~~~~~~~f~~~~~~~~~~--~~~~~~~L~~sL~~~L~~~p~LaGrl 84 (469)
|+|.++++|+|+.| ++.+.++||+||+. ++..|+..+|||+.+... + +++++++||+||+++|++||+|||||
T Consensus 2 v~v~~~~~V~P~~~~~~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~---~~~~~~~~~~Lk~sLs~~L~~~~plAGRl 78 (453)
T 2xr7_A 2 ASVIEQCQVVPSPGSATELTLPLTYFDHVWLAFHRMRRILFYKLPISR---PDFVQTIIPTLKDSLSLTLKYYLPLAGNV 78 (453)
T ss_dssp CEEEEESCCCCCTTCCSEEEEECCHHHHGGGGSCCEEEEEEEECCCCS---HHHHHTHHHHHHHHHHHHHTTSGGGGSCC
T ss_pred eEEEEEEEecCCCCCCCCceECCCHHHhhhhhcCCccEEEEEeCCCCC---chhHHHHHHHHHHHHHHHhhhccccCeeE
Confidence 89999999999987 56799999999997 455689999999875421 1 34578999999999999999999999
Q ss_pred EecC--CCCcEEEec-CCCeeEEEEecccccccccCCC-CChhhhcccCCCCC----C-----CCeeEEEEeEEecCeEE
Q 012180 85 VYNY--DGEPELLCN-NRGVDFVEAYAEVELRDLNLYN-PDESIEGKLLPKKK----K-----NGLLSVQATELKCGGIV 151 (469)
Q Consensus 85 ~~~~--~G~~~i~~~-~~gv~~~~a~~~~~l~~l~~~~-p~~~~~~~l~P~~~----~-----~pll~vQvt~f~~GG~~ 151 (469)
+.++ +|+++|+|+ ++||.|++|+++.+++++.... +.......|+|..+ . .|++.+|||+|+|||++
T Consensus 79 ~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cGG~~ 158 (453)
T 2xr7_A 79 ACPQDWSGYPELRYVTGNSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLFPNHGIS 158 (453)
T ss_dssp EEESSTTCCCEEEEETTCCCEEEEEECCSCHHHHTCSSCCCGGGGGGGSCCCCCCEEETTEEECCCEEEEEEEETTTEEE
T ss_pred EccCCCCCCEEEEecCCCceEEEEEecCCCHHHhhccCCCChhhhhcCCCCCCCcccccccccCCeEEEEEEEccCCcEE
Confidence 9876 799999999 5999999999999999986432 22223456777543 2 89999999999999999
Q ss_pred EEccccccccccccHHHHHHHHHHHHh-cC-C----CCCCCCcCccccCCCCCCCCCCccccccCCCCCC-CCCCCCCCC
Q 012180 152 VACTLDHRIADAYSTNMFLVSWAEIAQ-SK-P----MSVLPSFRRSILNPRRPLCIDHAFDDMYLPISSL-PPPPPPNNT 224 (469)
Q Consensus 152 l~~~~~H~v~Dg~~~~~fl~~wa~~~r-g~-~----~~~~P~~dr~~l~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~ 224 (469)
||+++||.++||.|+.+|+++||+++| |. + ....|++||+.+. .|+.+.......+...+.+ +..
T Consensus 159 lg~~~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~~~~~~~~~P~~dr~~l~--~p~~~~~~~~~~~~~~~~~~~~~------ 230 (453)
T 2xr7_A 159 IGFTNHHVAGDGATIVKFVRAWALLNKFGGDEQFLANEFIPFYDRSVIK--DPNGVGMSIWNEMKKYKHMMKMS------ 230 (453)
T ss_dssp EEEEECTTTCCSHHHHHHHHHHHHHHHTTTCGGGSCGGGSCBCCCSSSC--CSSCHHHHTTTTGGGCTTTSCCS------
T ss_pred EEEeeeeeeechhHHHHHHHHHHHHhhcCCCcccCCCCCCCcccccccc--CCCCcchHHHHhccccCCccccc------
Confidence 999999999999999999999999999 76 3 2346899998775 2332211011111000111 000
Q ss_pred CCccCCCCceEEEEEeCHHHHHHHHHHccCCC---CCCChhHHHHHHHHHHHHhhCCCC--CCCCCceEEEEEEEeCCCC
Q 012180 225 PEEANGNNLISRIYYIKSEQLNELQLLASSDE---CKRTKLESFSAYLWKMVALSGNDN--DGSGTRISKMGVVVDGRTR 299 (469)
Q Consensus 225 ~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~---~~~St~d~l~A~lW~~~~~Ar~~~--~~~~~~~~~l~~~vd~R~r 299 (469)
......++..++|+|++++|++||+++..+. .++|++|+|+||+|+|+++||... ..++++.+.+.++||+|+|
T Consensus 231 -~~~~~~~~~~~~f~f~~~~i~~Lk~~a~~~~~~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~vd~R~r 309 (453)
T 2xr7_A 231 -DVVTPPDKVRGTFIITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCAADCRAQ 309 (453)
T ss_dssp -CCCCCCSCCCEEEEECHHHHHHHHHHHHHHSCCCSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEECCTTSC
T ss_pred -cccCCCCceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHhccccccCCCCcceEEEEEeccccc
Confidence 0011345668999999999999999986532 479999999999999999999631 0035678999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCccccccccccccchhhhhc-CcHHHHHHHHHHHHHhc-CChh-HHhhHHHHHHhcCCCCccc
Q 012180 300 LSSSKGDHVNKSISMDSYFGNVLSVPFGGQKVNELIE-KPLSWVAKRVHDFLENA-VTKD-HFLGLIDWVEAHRPDPAIS 376 (469)
Q Consensus 300 l~~~~~~~~~~pplp~~y~GN~~~~~~~~~~~~~l~~-~~L~~~A~~ir~~i~~~-~~~~-~~~~~~~~~~~~~~~~~~~ 376 (469)
++ ||+|++||||++..+.+.++++||.+ .+|+.+|.+||+++++. ++++ ++++ +|++..++
T Consensus 310 l~---------pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~e~~~~~--~~~~~~~~----- 373 (453)
T 2xr7_A 310 FN---------PPLPPSYFGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWILSG--SWFKEYDK----- 373 (453)
T ss_dssp SS---------SCCCTTBCSCCCCEEEEEEEHHHHTSSSHHHHHHHHHHHHHTTSSSCHHHHHSS--CTTSCCCC-----
T ss_pred CC---------CCCCcccccceeeeeeeeeeHHHhcCcchHHHHHHHHHHHHHhhccCCccchhh--HHHHHHHh-----
Confidence 98 89999999999999999999999995 89999999999999662 4677 8988 77765331
Q ss_pred cccccCCCCCCcEEEeecCCCCCCccccCCCccccccccccCCCCce--EEEecCCCCCCCcEEEEEeCCHHHHHHHHhc
Q 012180 377 KICATGSKDGPAFVVSSGQRFPVSKVDFGWGKPVFGSYHFPWGSDAG--YVMPMPSPAHNSDWVVYMHLSEKQLDLIETQ 454 (469)
Q Consensus 377 ~~~~~~~~~~~~~~~ssw~~~~~~~~DFG~G~P~~~~~~~p~~~~~g--~~~i~p~~~~~g~~~v~v~L~~~~m~~l~~~ 454 (469)
.+ ...++.+|||.++++|++|||||+|+++++.. ...+| .++++|+++++||++|.|+|++++|++|+++
T Consensus 374 -~~-----~~~~~~vssw~~~~~y~~DFG~G~P~~v~~~~--~~~~g~~~~~l~~~~~~~ggi~v~v~L~~~~m~~f~~~ 445 (453)
T 2xr7_A 374 -VD-----AKRSLSVAGSPKLDLYAADFGWGRPEKLEFVS--IDNDDGISMSLSKSKDSDGDLEIGLSLSKTRMNAFAAM 445 (453)
T ss_dssp -SC-----GGGEEEECSCSSCCGGGCCCSSCSCSEEEEGG--GSSCSSCEEEEEECSSSTTCEEEEECCCHHHHHHHHHH
T ss_pred -hc-----cCCcEEEeccccCCccccccCCCcceEEEeee--ecCCCceEEEEeecCCCCCCEEEEEEeCHHHHHHHHHH
Confidence 11 12478999999999999999999999987522 12467 7888888888899999999999999999875
Q ss_pred ccccc
Q 012180 455 ASNVF 459 (469)
Q Consensus 455 d~~~~ 459 (469)
..+.+
T Consensus 446 ~~~~~ 450 (453)
T 2xr7_A 446 FTHGI 450 (453)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 44433
No 4
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=3.1e-71 Score=575.97 Aligned_cols=410 Identities=22% Similarity=0.286 Sum_probs=320.2
Q ss_pred EEEEEEeeeeEecCCC-CCCCeecCCcccCc-CCceeeEEEEEEcCCCCCCCCCCCcHHHHHHHHHHHHHhhccccCcEE
Q 012180 7 FIVTVSKKDVVAAVLP-LQEHWLPLSNLDLL-LPAIDFGVFFCYKKPTAADFGSFGSTVDVLKKAMAEALVSYYALAGEV 84 (469)
Q Consensus 7 ~~V~i~~~~~V~P~~p-~~~~~~~LS~lD~~-~~~~~~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl 84 (469)
+.|+|.++++|+|+.| ++.+.++||+||+. ++..|+..+|||+.+.... ..+++++++||+||+++|++||+|||||
T Consensus 5 ~~v~v~~~~~V~P~~~~~~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~-~~~~~~~~~Lk~sLs~~L~~~~plAGRl 83 (454)
T 2e1v_A 5 PILTVLEQSQVSPPPDTLGDKSLQLTFFDFFWLRSPPINNLFFYELPITRS-QFTETVVPNIKHSLSITLKHFYPFVGKL 83 (454)
T ss_dssp -CEEEEEEEEECCCTTSCCCEEEECCHHHHTTTTCCCEEEEEEEECCCCHH-HHHHTHHHHHHHHHHHHHTTCGGGGSEE
T ss_pred ceEEEEEEEEEeCCCCCCCCceecCchHHhhhhccCCccEEEEEeCCCCcc-hhhHHHHHHHHHHHHHHhhhccccceee
Confidence 5799999999999987 57899999999998 4556899999998754210 0023578999999999999999999999
Q ss_pred E-ec-CCCCcEEEec-CCCeeEEEEecccccccccCCCC-ChhhhcccCCCCC---------CCCeeEEEEeEEecCeEE
Q 012180 85 V-YN-YDGEPELLCN-NRGVDFVEAYAEVELRDLNLYNP-DESIEGKLLPKKK---------KNGLLSVQATELKCGGIV 151 (469)
Q Consensus 85 ~-~~-~~G~~~i~~~-~~gv~~~~a~~~~~l~~l~~~~p-~~~~~~~l~P~~~---------~~pll~vQvt~f~~GG~~ 151 (469)
+ .+ ++|+++|+|+ ++||.|++|+++.+++++....+ .......|+|..+ +.|++.+|||+|+|||++
T Consensus 84 ~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cgG~~ 163 (454)
T 2e1v_A 84 VVYPAPTKKPEICYVEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLFPNQGIA 163 (454)
T ss_dssp EECSSSSSCCEEEECTTCCEEEEEEEECSCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEECEEEEEEEETTTEEE
T ss_pred eeccCCCCCEEEEECCCCcEEEEEEEeCCCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCceEEEEEEEecCCcEE
Confidence 8 65 5799999999 59999999999999999864332 2222456777542 129999999999999999
Q ss_pred EEccccccccccccHHHHHHHHHHHHh-cCC----C--CCCCCcCccccCCCCCCCCCCccccccCCCCC---CCCCCCC
Q 012180 152 VACTLDHRIADAYSTNMFLVSWAEIAQ-SKP----M--SVLPSFRRSILNPRRPLCIDHAFDDMYLPISS---LPPPPPP 221 (469)
Q Consensus 152 l~~~~~H~v~Dg~~~~~fl~~wa~~~r-g~~----~--~~~P~~dr~~l~~~~~p~~~~~~~~~~~~~~~---~~~~~~~ 221 (469)
||+++||.++||.|+.+|+++||+++| |.. . ...|++|| .+. +|+ ++......+..... ......
T Consensus 164 lg~~~~H~v~Dg~~~~~Fl~awa~~~r~g~~~~~~~~~~~~P~~dr-~l~--~p~-~~~~~~~~~~~~~~~~~~~~~~~- 238 (454)
T 2e1v_A 164 IGITNHHCLGDASTRFCFLKAWTSIARSGNNDESFLANGTRPLYDR-IIK--YPM-LDEAYLKRAKVESFNEDYVTQSL- 238 (454)
T ss_dssp EEEEECGGGCCHHHHHHHHHHHHHHHHTTSCCHHHHHHSCCCBCCC-CCC--CHH-HHHHHHHHTTCTTHHHHCCCCCC-
T ss_pred EEEEeeeeecchhHHHHHHHHHHHHhccCCCccccCCCCCCCcccc-cCC--CCC-cchHHHHhhhccccccccCcccC-
Confidence 999999999999999999999999999 763 1 34689999 654 333 21111111111000 000000
Q ss_pred CCCCCccCCCCceEEEEEeCHHHHHHHHHHccCCC---CCCChhHHHHHHHHHHHHhhCCCCCCCCCceEEEEEEEeCCC
Q 012180 222 NNTPEEANGNNLISRIYYIKSEQLNELQLLASSDE---CKRTKLESFSAYLWKMVALSGNDNDGSGTRISKMGVVVDGRT 298 (469)
Q Consensus 222 ~~~~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~---~~~St~d~l~A~lW~~~~~Ar~~~~~~~~~~~~l~~~vd~R~ 298 (469)
....+...++|+|++++|++||+++..+. .++|++|+|+||+|+|+++|| +++.+.+.++||+|+
T Consensus 239 ------~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~St~d~l~A~lWr~~~~Ar------~~~~~~l~~~vd~R~ 306 (454)
T 2e1v_A 239 ------AGPSDKLRATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSR------NDKLQLFGFPIDRRA 306 (454)
T ss_dssp ------CCCCCEEEEEEEECHHHHHHHHHHHHHHCTTCSCCCHHHHHHHHHHHHHHHHH------CCSEEEEEEEEECGG
T ss_pred ------CCCCCceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhhc------CCCceEEEEEecchh
Confidence 01345778999999999999999986532 479999999999999999999 256899999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCccccccccccccchhhhhc-CcHHHHHHHHHHHHHhcCC----hhHHhh-HHHHHHhcCCC
Q 012180 299 RLSSSKGDHVNKSISMDSYFGNVLSVPFGGQKVNELIE-KPLSWVAKRVHDFLENAVT----KDHFLG-LIDWVEAHRPD 372 (469)
Q Consensus 299 rl~~~~~~~~~~pplp~~y~GN~~~~~~~~~~~~~l~~-~~L~~~A~~ir~~i~~~~~----~~~~~~-~~~~~~~~~~~ 372 (469)
|++ ||+|++||||++..+.+.++++||.+ .+|+.+|.+||+++++ ++ ++++++ ..+|++..+
T Consensus 307 rl~---------pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~-~~~~~~~~~~~~~~~~~~~~~~-- 374 (454)
T 2e1v_A 307 RMK---------PPIPTAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLHK-TLTDYKDGVLKDDMESFNDLVS-- 374 (454)
T ss_dssp GSS---------SCCCTTBCSCCEEEEEEEEEGGGTSHHHHHHHHHHHHHHHHHH-HHHHHHTTCCCC-----CHHHH--
T ss_pred ccC---------CCCCcccccceeeeEEeecchhhccccccHHHHHHHHHHHHHh-hhhhhhHHHHHHHHHHHHHHHH--
Confidence 998 89999999999999999999999995 8999999999999987 66 455666 666665421
Q ss_pred CccccccccCCCCCCcEEEeecCCCCCCccccCCCccccccccccCCCCceEEEecCCCCCCCcEEEEEeCCHHHHHHHH
Q 012180 373 PAISKICATGSKDGPAFVVSSGQRFPVSKVDFGWGKPVFGSYHFPWGSDAGYVMPMPSPAHNSDWVVYMHLSEKQLDLIE 452 (469)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~ssw~~~~~~~~DFG~G~P~~~~~~~p~~~~~g~~~i~p~~~~~g~~~v~v~L~~~~m~~l~ 452 (469)
.. ....++.+|||.++++|++|||||+|+++++... ..+|.++++|+++++||++|.|+|++++|++|+
T Consensus 375 ----~~-----~~~~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~--~~~g~~~l~p~~~~~ggi~v~v~L~~~~m~~f~ 443 (454)
T 2e1v_A 375 ----EG-----MPTTMTWVSGTPKLRFYDMDFGWGKPKKLETVSI--DHNGAISINSCKESNEDLEIGVCISATQMEDFV 443 (454)
T ss_dssp ----HC-----CCSEEEEEECCTTSCGGGCCSSSCSCSEEEEGGG--GGSSEEEEEECSSCTTSEEEEEEEEHHHHHHHH
T ss_pred ----hh-----cCCceEEEecCCCCCcccccccCccceEEEeeee--CCCCeEEEEecCCCCCCEEEEEEECHHHHHHHH
Confidence 11 1234799999999999999999999999875221 246888899988888999999999999999998
Q ss_pred hcccc
Q 012180 453 TQASN 457 (469)
Q Consensus 453 ~~d~~ 457 (469)
++..+
T Consensus 444 ~~~~~ 448 (454)
T 2e1v_A 444 HIFDD 448 (454)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 74433
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=4.4e-66 Score=537.00 Aligned_cols=409 Identities=14% Similarity=0.193 Sum_probs=314.5
Q ss_pred eecCCcccCcC--CceeeEEEEEEcCCCCCCCCCCCcHHHHHHHHHHHHHhhccccCcEEEecC-----CCCcEEEecCC
Q 012180 27 WLPLSNLDLLL--PAIDFGVFFCYKKPTAADFGSFGSTVDVLKKAMAEALVSYYALAGEVVYNY-----DGEPELLCNNR 99 (469)
Q Consensus 27 ~~~LS~lD~~~--~~~~~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~-----~G~~~i~~~~~ 99 (469)
.++||.|||+. ++.|++.+|||+.++.. ++++++++||+||+++|++||||||||+.++ +|+++|+|+++
T Consensus 4 ~~~Ls~lD~~~~~~~~y~~~~~~y~~~~~~---~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~~~ 80 (451)
T 2rkv_A 4 KIQLDTLGQLPGLLSIYTQISLLYPVSDSS---QYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPFED 80 (451)
T ss_dssp CEECCGGGGCTTGGGCEEEEEEEEECSCGG---GHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECCCS
T ss_pred cccCChhhcCccccccceeEEEEEECCCCC---CHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeecCC
Confidence 46999999997 68999999999864421 2356799999999999999999999998764 58999998886
Q ss_pred CeeEEEEeccc-----cccccc-CCCCChhhhc-cc-----CCCC------CCCCeeEEEEeEEecCeEEEEcccccccc
Q 012180 100 GVDFVEAYAEV-----ELRDLN-LYNPDESIEG-KL-----LPKK------KKNGLLSVQATELKCGGIVVACTLDHRIA 161 (469)
Q Consensus 100 gv~~~~a~~~~-----~l~~l~-~~~p~~~~~~-~l-----~P~~------~~~pll~vQvt~f~~GG~~l~~~~~H~v~ 161 (469)
++.|++++++. +++++. ...|...+.. .+ +|.. .+.|++.+|||+| |||++||+++||.++
T Consensus 81 ~~~~~va~~~~d~~~p~~~~l~~~~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT~~-~GG~~lg~~~~H~v~ 159 (451)
T 2rkv_A 81 VPRVVVKDLRDDPSAPTIEGMRKAGYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLNFI-KGGLILTVNGQHGAM 159 (451)
T ss_dssp SCEEEEEECTTCTTSCBHHHHHHHTSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEEEE-BTEEEEEEEEETTTC
T ss_pred CCeEEEEeCCCCCCCCCHHHHHHcCCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEEEEEe-cCceeeeeeehhccc
Confidence 76699988764 577665 2233322211 12 3321 1489999999955 899999999999999
Q ss_pred ccccHHHHHHHHHHHHhcCCCCC----CCCcCccccCCC---CCCCCCCccccccCCCCCCCCCCCCCCCCCccCCCCce
Q 012180 162 DAYSTNMFLVSWAEIAQSKPMSV----LPSFRRSILNPR---RPLCIDHAFDDMYLPISSLPPPPPPNNTPEEANGNNLI 234 (469)
Q Consensus 162 Dg~~~~~fl~~wa~~~rg~~~~~----~P~~dr~~l~~~---~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (469)
||.|+.+|+++||++|||.+... .|++||+.+.+. .+|.... .+..|.+.+... .. .....++.
T Consensus 160 Dg~g~~~Fl~awa~~~rg~~~~~~~~~~p~~dr~~~~p~~~~~~p~~~~-~~~~~~~~~~~~---~~-----~~~~~~~~ 230 (451)
T 2rkv_A 160 DMVGQDAVIRLLSKACRNDPFTEEEMTAMNLDRKTIVPYLENYTIGPEV-DHQIVKADVAGG---DA-----VLTPVSAS 230 (451)
T ss_dssp CHHHHHHHHHHHHHHHHTCCCCHHHHHHTTCCSTTSSCCCTTCCCCGGG-TTCBCCTTSCC---------------CCEE
T ss_pred cHHHHHHHHHHHHHHhcCCCCCccccccccCchhhccccccccCCCccc-cccccCCCCCCC---CC-----CCCCCCce
Confidence 99999999999999999976432 578998755432 2332111 122232111000 00 01234678
Q ss_pred EEEEEeCHHHHHHHHHHccCCC----CCCChhHHHHHHHHHHHHhhCCCCCCCCCceEEEEEEEeCCCCCCCCCCCCCCC
Q 012180 235 SRIYYIKSEQLNELQLLASSDE----CKRTKLESFSAYLWKMVALSGNDNDGSGTRISKMGVVVDGRTRLSSSKGDHVNK 310 (469)
Q Consensus 235 ~~~f~~~~~~l~~Lk~~~~~~~----~~~St~d~l~A~lW~~~~~Ar~~~~~~~~~~~~l~~~vd~R~rl~~~~~~~~~~ 310 (469)
.++|+|++++|++||+++..+. .++|++|+|+||+|||+++||.. ..++++.+.+.++||+|+|+.
T Consensus 231 ~~~f~f~~~~i~~LK~~a~~~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~-~~~~~~~~~l~~~vd~R~rl~--------- 300 (451)
T 2rkv_A 231 WAFFTFSPKAMSELKDAATKTLDASTKFVSTDDALSAFIWKSASRVRLE-RIDGSAPTEFCRAVDARPAMG--------- 300 (451)
T ss_dssp EEEEEECHHHHHHHHHHHHTTCCTTCSCCCHHHHHHHHHHHHHHHHHTT-TSCTTSEEEEEEEEECHHHHT---------
T ss_pred EEEEEECHHHHHHHHHHHhhhccCCCCCccHHHHHHHHHHHHHHHHHhc-cCCCCCceEEEEEecccccCC---------
Confidence 9999999999999999987542 46999999999999999999821 125678999999999999997
Q ss_pred CCCCCCCccccccccccccchhhhhcCcHHHHHHHHHHHHHhcCChhH-HhhHHHHHHhcCCCCccccccccCCCCCCcE
Q 012180 311 SISMDSYFGNVLSVPFGGQKVNELIEKPLSWVAKRVHDFLENAVTKDH-FLGLIDWVEAHRPDPAISKICATGSKDGPAF 389 (469)
Q Consensus 311 pplp~~y~GN~~~~~~~~~~~~~l~~~~L~~~A~~ir~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (469)
+|.+||||++..+.+.++++||.+.+|+++|.+||+++++ +++++ +++.++|++..++...+. +......+.++
T Consensus 301 --lP~~y~GN~~~~~~~~~~~~el~~~~L~~~a~~ir~ai~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 375 (451)
T 2rkv_A 301 --VSNNYPGLLQNMTYHNSTIGEIANESLGATASRLRSELDP-ASMRQRTRGLATYLHNNPDKSNVS--LTADADPSTSV 375 (451)
T ss_dssp --CCTTCCSCCEEEEEEEEEHHHHHHSCHHHHHHHHHTTCCH-HHHHHHHHHHHHHHHHCSCCTTBC--TTTTCCTTTCE
T ss_pred --CCCCCcccceeeecccCcHHHhccchHHHHHHHHHHHhcc-cCchhHHHHHHHHHhcCCCccccc--cccccCCCCCE
Confidence 6789999999999998999999999999999999999976 68788 999999999876543221 10011234679
Q ss_pred EEeecCCCCCCccccC--CCccccccccccCCCCceEEEecCCCCCCCcEEEEEeCCHHHHHHHHhcccccccccccccc
Q 012180 390 VVSSGQRFPVSKVDFG--WGKPVFGSYHFPWGSDAGYVMPMPSPAHNSDWVVYMHLSEKQLDLIETQASNVFEPLTFNYL 467 (469)
Q Consensus 390 ~~ssw~~~~~~~~DFG--~G~P~~~~~~~p~~~~~g~~~i~p~~~~~g~~~v~v~L~~~~m~~l~~~d~~~~~~~~~~~~ 467 (469)
++|||+++++|++||| ||+|++++... ....+|+++++|. +++||++|.|+|++++|++|++ |+||++| +.|+
T Consensus 376 ~~ssw~~~~~y~~DFG~gwG~P~~v~~~~-~~~~~g~~~~~p~-~~~ggi~v~v~L~~~~m~~f~~-d~ef~~~--~~~~ 450 (451)
T 2rkv_A 376 MLSSWAKVGLWDYDFGLGLGKPETVRRPI-FEPVESLMYFMPK-KPDGEFCAALSLRDEDMDRLKA-DKEWTKY--AQYV 450 (451)
T ss_dssp EEEECTTCCGGGCCTTCSSCSCSEEECCB-CSCCTTEEEECCC-CTTSCEEEEEEEEHHHHHHHHH-CHHHHTT--CEEC
T ss_pred EEeccccCCccccccCCCCCCceEEEcCC-ccCCCCEEEEecC-CCCCCEEEEEEeCHHHHHHHhc-CHHHHhh--heec
Confidence 9999999999999998 89999886311 1125788899985 4578999999999999999998 8999999 7888
Q ss_pred c
Q 012180 468 A 468 (469)
Q Consensus 468 ~ 468 (469)
|
T Consensus 451 g 451 (451)
T 2rkv_A 451 G 451 (451)
T ss_dssp C
T ss_pred C
Confidence 7
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=99.09 E-value=1.9e-08 Score=101.88 Aligned_cols=287 Identities=14% Similarity=0.085 Sum_probs=158.4
Q ss_pred CCeecCCcccCcC--CceeeEEEEEEcCCCCCCCCCCCcHHHHHHHHHHHHHhhccccCcEEEecCCCCcEEEecCCCee
Q 012180 25 EHWLPLSNLDLLL--PAIDFGVFFCYKKPTAADFGSFGSTVDVLKKAMAEALVSYYALAGEVVYNYDGEPELLCNNRGVD 102 (469)
Q Consensus 25 ~~~~~LS~lD~~~--~~~~~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~G~~~i~~~~~gv~ 102 (469)
...+|||++++.+ ..+++..++-++.+. ..+.|++++.+++..+|.|-.++...+++.+.+......+.
T Consensus 5 ~~~~pls~~Q~~~~~~~y~~~~~~~l~g~l---------d~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~~ 75 (422)
T 1q9j_A 5 SVIRKLSHSEEVFAQYEVFTSMTIQLRGVI---------DVDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLLHS 75 (422)
T ss_dssp SEEEECCHHHHHHHHTTCEEEEEEEEESCC---------CHHHHHHHHHHHHHHCGGGSEEEEECTTSSEEEEECCSSSC
T ss_pred ceeecCCHHHHHHHhcCceEEEEEEEecCC---------CHHHHHHHHHHHHHhCccceEEEEecCCcceeeeccCCCCC
Confidence 4568888887743 223334443333211 27999999999999999999999875544433333322222
Q ss_pred -EEEEecccccccccCCCCChhhhcccCCCCCCCCeeEEEEeEEecCeEEEEccccccccccccHHHHHHHHHHHHh---
Q 012180 103 -FVEAYAEVELRDLNLYNPDESIEGKLLPKKKKNGLLSVQATELKCGGIVVACTLDHRIADAYSTNMFLVSWAEIAQ--- 178 (469)
Q Consensus 103 -~~~a~~~~~l~~l~~~~p~~~~~~~l~P~~~~~pll~vQvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r--- 178 (469)
+.+. |+........+...-.|.....|++++.+.. .+++..|.+.+||.++||.|+..|++.|.+.++
T Consensus 76 ~~~~~-------d~~~~~~~~~~~~~~~~~d~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~~Y~~~~ 147 (422)
T 1q9j_A 76 GICVI-------DGTAATNGSPSGNAELRLDQSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLVDELFSRYTDAV 147 (422)
T ss_dssp CCEEE-------C------------CCCCCCTTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEE-------ECCCCCcchhhhcccCccCCCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHHHHHHHHHHHHhh
Confidence 2111 1110000000101112222347899888877 678899999999999999999999999999887
Q ss_pred --cCCCCCC--CCcCc--cccCCCC-----CCCCCCccccccCCCCCCC-CCCCCCCCCCccCCCCceEEEEEeCHHHHH
Q 012180 179 --SKPMSVL--PSFRR--SILNPRR-----PLCIDHAFDDMYLPISSLP-PPPPPNNTPEEANGNNLISRIYYIKSEQLN 246 (469)
Q Consensus 179 --g~~~~~~--P~~dr--~~l~~~~-----~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~f~~~~~~l~ 246 (469)
|.+.... +..+- .....+. .+.... ....|+.- .+. ....+.... ...........+.++.+..+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~W~~-~l~~~~~lp~~~~-~~~~~~~~~~~~~l~~~~~~ 224 (422)
T 1q9j_A 148 TTGDPGPITPQPTPLSMEAVLAQRGIRKQGLSGAER-FMSVMYAY-EIPATETPAVLAH-PGLPQAVPVTRLWLSKQQTS 224 (422)
T ss_dssp HSSSCCCCCCCCCCBCHHHHHHHSSCCC-----CTT-SSTTTTCC---------------CCSBCCCCEEEECCCHHHHH
T ss_pred ccCCCCCCCCCCCCCCHHHHHHhcCCcccccchhhh-hhhhhhcc-cCCCcccCCCCCC-CCCCCCccceEEEeCHHHHH
Confidence 3332211 11111 0000000 001100 01123210 011 000010000 01112235678889999999
Q ss_pred HHHHHccCCCCCCChhHHHHHHHHHHHHhhCCCCCCCCCceEEEEEEEeCCCCCCCCCCCCCCCCCCC----CCCccccc
Q 012180 247 ELQLLASSDECKRTKLESFSAYLWKMVALSGNDNDGSGTRISKMGVVVDGRTRLSSSKGDHVNKSISM----DSYFGNVL 322 (469)
Q Consensus 247 ~Lk~~~~~~~~~~St~d~l~A~lW~~~~~Ar~~~~~~~~~~~~l~~~vd~R~rl~~~~~~~~~~pplp----~~y~GN~~ 322 (469)
+|++.|... .+|.+.++.|.+-..+.+-+.. ......+.++++.|.... |+++ .+.+|..+
T Consensus 225 ~l~~~a~~~--~~t~~~~l~aa~~~~l~r~~~~----~~~~v~~g~~~~~R~~~~---------~~~~~~~~~~~vG~f~ 289 (422)
T 1q9j_A 225 DLMAFGREH--RLSLNAVVAAAILLTEWQLRNT----PHVPIPYVYPVDLRFVLA---------PPVAPTEATNLLGAAS 289 (422)
T ss_dssp HHHHHHTTT--TCCHHHHHHHHHHHHHHHHHTC----SSCCEEEEEEEETTTTSS---------SCCCTTTBSCCEEEEE
T ss_pred HHHHHHHHh--CCCHHHHHHHHHHHHHHhcccC----CCceEEEeeeeecccccC---------CCCChhhhhhhheeee
Confidence 999999875 4899999988766666654221 345688899999998865 3332 23344433
Q ss_pred cccccccchhhhhcCcHHHHHHHHHHHHHh
Q 012180 323 SVPFGGQKVNELIEKPLSWVAKRVHDFLEN 352 (469)
Q Consensus 323 ~~~~~~~~~~~l~~~~L~~~A~~ir~~i~~ 352 (469)
. .+++. .+.++.+++..+++.+.+
T Consensus 290 n----~lp~~--~~~~~~~~l~~v~~~~~~ 313 (422)
T 1q9j_A 290 Y----LAEIG--PNTDIVDLASDIVATLRA 313 (422)
T ss_dssp E----EECCC--SSCCHHHHHHHHHHHHHH
T ss_pred e----eeecc--CCCCHHHHHHHHHHHHHH
Confidence 2 22222 134677778888777654
No 7
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.44 E-value=1.2e-06 Score=90.92 Aligned_cols=288 Identities=13% Similarity=-0.004 Sum_probs=157.7
Q ss_pred CCCeecCCcccCc-------CCc-eeeEEEEEEcCCCCCCCCCCCcHHHHHHHHHHHHHhhccccCcEEEecCCCCcEEE
Q 012180 24 QEHWLPLSNLDLL-------LPA-IDFGVFFCYKKPTAADFGSFGSTVDVLKKAMAEALVSYYALAGEVVYNYDGEPELL 95 (469)
Q Consensus 24 ~~~~~~LS~lD~~-------~~~-~~~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~G~~~i~ 95 (469)
.+..+|||+.-+- .+. .| .+.+.|+.+.. . ..+.|++++.+++..+|.|--++...+ |.+. .
T Consensus 10 ~~~~~Pls~~Q~~~~~~~~~~~~~~y-~~~~~~~l~g~-----l--d~~~L~~A~~~lv~rh~~LRt~f~~~~-~~~~-~ 79 (493)
T 4hvm_A 10 RPGLRRASFLQRGAWRWLREAPPAAA-FAARGLLGSGR-----I--DDDRLAAAADEVLDAFPLLRVNFVDDD-GLWM-R 79 (493)
T ss_dssp --CEEECCHHHHHHHHHHTTSCGGGG-EEEEEEEEESS-----C--CHHHHHHHHHHHHHHCGGGGEEEEESS-SEEE-E
T ss_pred CCCCCCCCHHHHHHHHHHhhCCCCcc-eeEEEEEEeCC-----C--CHHHHHHHHHHHHHhchhceeEEEccC-CEEE-E
Confidence 3567888887642 121 13 23344444332 1 279999999999999999999998644 6555 4
Q ss_pred ecCCCeeEEEEecccccccccCCCCC-hhh---hcc--cCCCC-CCCCeeEEEEeEEecCeEEEEccccccccccccHHH
Q 012180 96 CNNRGVDFVEAYAEVELRDLNLYNPD-ESI---EGK--LLPKK-KKNGLLSVQATELKCGGIVVACTLDHRIADAYSTNM 168 (469)
Q Consensus 96 ~~~~gv~~~~a~~~~~l~~l~~~~p~-~~~---~~~--l~P~~-~~~pll~vQvt~f~~GG~~l~~~~~H~v~Dg~~~~~ 168 (469)
.....+.+.+.+. ...... ..+ ... --|.. ...|++++.+.....+...|.+.+||.++||.|+..
T Consensus 80 v~~~~~~~~~~d~-------~~~~~~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~~ 152 (493)
T 4hvm_A 80 TRENADALVRSDL-------RGHPDPQARCVELLRADRDRPTDPERDPLVRLHLVRLSETDVVLGVVAHQMLLDARSRYM 152 (493)
T ss_dssp ECSCCCCEEEEEC-------TTSSSHHHHHHHHHHHHHSSCCCTTTSCSEEEEEEECSSSEEEEEEEEETTTCCHHHHHH
T ss_pred ecCCCCCceEEEC-------CCCCchHHHHHHHHHHHhcCCCCCCCCCeEEEEEEEECCCcEEEEEecchhhccHHHHHH
Confidence 4432244433222 110000 111 011 11221 246899888877666678999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCcCccccCCCC--C---CCCC--Ccccccc-CCCCCCCCCCCCCCCCCccCCCCceEEEEEe
Q 012180 169 FLVSWAEIAQSKPMSVLPSFRRSILNPRR--P---LCID--HAFDDMY-LPISSLPPPPPPNNTPEEANGNNLISRIYYI 240 (469)
Q Consensus 169 fl~~wa~~~rg~~~~~~P~~dr~~l~~~~--~---p~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 240 (469)
+++.+.+.+.|.+.. .+..|-... .+. . +... ..+|..+ ...+.+ ...+. . ........+.+
T Consensus 153 l~~~l~~~Y~g~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~W~~~l~~~~~l--~~~~~-----~-~~~~~~~~~~l 222 (493)
T 4hvm_A 153 VLGAVWQAYYGRFRP-AQYRDFAEV-ADFHPLDRETVRVARHRWWSRRLPALPVR--GGDGG-----P-VGPPETSRLRV 222 (493)
T ss_dssp HHHHHHHHHTTCCCG-GGSBCGGGT-TTCCTTCSHHHHHHHHHHHHHHGGGSCCC--C-------------CCEEEEEEE
T ss_pred HHHHHHHHhCCCCCC-cCHHHHHHH-HhhhhcccChhhHHHHHHHHHhccCCCCC--CCCCC-----C-CCCCeeEEEEc
Confidence 999999999876543 111111100 011 0 0000 0112111 011101 10010 0 11256778899
Q ss_pred CHHHHHHHHHHccCCCCCCC--hhHHHHHHHHHHHHhhCCC----C-CCCCCceEEEEEEEeCCCCCCCCCCCCCCCCCC
Q 012180 241 KSEQLNELQLLASSDECKRT--KLESFSAYLWKMVALSGND----N-DGSGTRISKMGVVVDGRTRLSSSKGDHVNKSIS 313 (469)
Q Consensus 241 ~~~~l~~Lk~~~~~~~~~~S--t~d~l~A~lW~~~~~Ar~~----~-~~~~~~~~~l~~~vd~R~rl~~~~~~~~~~ppl 313 (469)
+.+..++|++.|... .+| .+.++.|.+-..+.+-+.. . .........+.++++.|..-. +
T Consensus 223 ~~~~~~~l~~~a~~~--~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g~~dv~~g~~~~gR~~~~-----------~ 289 (493)
T 4hvm_A 223 PGSRWQALTEPGGPL--GGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTGKDSLYLSTEVDLRDHLQ-----------L 289 (493)
T ss_dssp EHHHHHHHHCC--------CHHHHHHHHHHHHHHHC----------------CEEEEEEEEEHHHHTT-----------C
T ss_pred CHHHHHHHHHHHHHc--CCCchHHHHHHHHHHHHHHHhhhcccccccCcCCCCCEEEEeeccCCCCcc-----------h
Confidence 999999999988775 478 9998888655544444100 0 001245788999999996533 2
Q ss_pred CCCCccccccccccccchhhhhcCcHHHHHHHHHHHHHh
Q 012180 314 MDSYFGNVLSVPFGGQKVNELIEKPLSWVAKRVHDFLEN 352 (469)
Q Consensus 314 p~~y~GN~~~~~~~~~~~~~l~~~~L~~~A~~ir~~i~~ 352 (469)
.+.+|.++......+......+.++.+++..+++.+.+
T Consensus 290 -~~~vG~f~n~lplr~~~~~~~~~t~~~~l~~v~~~~~~ 327 (493)
T 4hvm_A 290 -GSVVGPLTDRVVFGVDLTGLREPSFRDLMSRTQAGFLD 327 (493)
T ss_dssp -CSBCSCCEEEEEEEEECTTCSSCBHHHHHHHHHHHHHH
T ss_pred -hcCeEeeeceeEEEEecCCCcCCCHHHHHHHHHHHHHH
Confidence 46677776554444444322246788888888887755
No 8
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.30 E-value=7.1e-05 Score=77.92 Aligned_cols=254 Identities=14% Similarity=0.121 Sum_probs=146.1
Q ss_pred HHHHHHHHHHHHhhccccCcEEEecCCCCcEEEec-CCCeeEEEEecccccccccCCCCChhhhccc-CCCC-CCCCeeE
Q 012180 63 VDVLKKAMAEALVSYYALAGEVVYNYDGEPELLCN-NRGVDFVEAYAEVELRDLNLYNPDESIEGKL-LPKK-KKNGLLS 139 (469)
Q Consensus 63 ~~~L~~sL~~~L~~~p~LaGrl~~~~~G~~~i~~~-~~gv~~~~a~~~~~l~~l~~~~p~~~~~~~l-~P~~-~~~pll~ 139 (469)
.+.|++++.+++..+|.|--++...+ |.+.-... +..+.+.+.+. +-+++. .....+ -|.. ...|+++
T Consensus 133 ~~~l~~A~~~lv~rh~~LRt~f~~~~-~~~~q~v~~~~~~~~~~~~~--~~~~~~------~~~~~~~~~fdl~~~pl~r 203 (520)
T 2jgp_A 133 RTRVEAAFQRLIARHESLRTSFAVVN-GEPVQNIHEDVPFALAYSEV--TEEEAR------ELVSSLVQPFDLEVAPLIR 203 (520)
T ss_dssp HHHHHHHHHHHHHHCGGGGEEEEEET-TEEEEEECSCCCCCCEEEEC--CHHHHH------HHHHHTCCCCCTTSSCCEE
T ss_pred HHHHHHHHHHHHHHhHhheeEEEeeC-CEEEEEECCCCCCceEEEeC--CHHHHH------HHHHHhcCCCCCCCCccee
Confidence 79999999999999999999997644 54332222 21222221111 101110 001111 1211 2478888
Q ss_pred EEEeEEecCeEEEEccccccccccccHHHHHHHHHHHHhcCCCCCCCC-c-C-----ccccCCCCCCCCC--CccccccC
Q 012180 140 VQATELKCGGIVVACTLDHRIADAYSTNMFLVSWAEIAQSKPMSVLPS-F-R-----RSILNPRRPLCID--HAFDDMYL 210 (469)
Q Consensus 140 vQvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~P~-~-d-----r~~l~~~~~p~~~--~~~~~~~~ 210 (469)
+.+.....+...|.+.+||.++||.|+..|++.+.+.+++.+....|. + | +.... .+..+ ..+|.++-
T Consensus 204 ~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~el~~~Y~~~~l~~~~~~~~d~~~~~~~~~~---~~~~~~~~~yW~~~l 280 (520)
T 2jgp_A 204 VSLLKIGEDRYVLFTDMHHSISDGVSSGILLAEWVQLYQGDVLPELRIQYKDFAVWQQEFSQ---SAAFHKQEAYWLQTF 280 (520)
T ss_dssp EEEEEEETTEEEEEEEEBGGGCCHHHHHHHHHHHHHHHTTCCCCCCSCCHHHHHHHHHHHTT---SHHHHHHHHHHHHHT
T ss_pred EEEEEEcCCcEEEEEEccceeecHhHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc---ChhhHHHHHHHHHHh
Confidence 888777667899999999999999999999999999999864332221 1 1 00010 00000 00111110
Q ss_pred CCCCCCC-CCCCCCCC-CccCCCCceEEEEEeCHHHHHHHHHHccCCCCCCChhHHHHHHHHHHHHhhCCCCCCCCCceE
Q 012180 211 PISSLPP-PPPPNNTP-EEANGNNLISRIYYIKSEQLNELQLLASSDECKRTKLESFSAYLWKMVALSGNDNDGSGTRIS 288 (469)
Q Consensus 211 ~~~~~~~-~~~~~~~~-~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~St~d~l~A~lW~~~~~Ar~~~~~~~~~~~ 288 (469)
...++ ...+.... ............+.++.+..++|++.+... .+|.+.++.|.+-..+.+-.+ ....
T Consensus 281 --~~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~--~~T~~~~l~aa~a~~L~~~~~------~~dv 350 (520)
T 2jgp_A 281 --ADDIPVLNLPTDFTRPSTQSFAGDQCTIGAGKALTEGLHQLAQAT--GTTLYMVLLAAYNVLLAKYAG------QEDI 350 (520)
T ss_dssp --SSCCCCCCCCCSSCCCSSCCCBEEEEEEECCHHHHHHHHHHHHHH--TCCHHHHHHHHHHHHHHHHHT------CSCE
T ss_pred --CCCCCcCCCCCCCCCCCCCCCCccEEEEeCCHHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHhcC------CCCe
Confidence 00000 00010000 001122345677899999999999998764 489999988865555554433 3467
Q ss_pred EEEEEEeCCCCCCCCCCCCCCCCCCCCCCccccccccccccchhhhhcCcHHHHHHHHHHHHHh
Q 012180 289 KMGVVVDGRTRLSSSKGDHVNKSISMDSYFGNVLSVPFGGQKVNELIEKPLSWVAKRVHDFLEN 352 (469)
Q Consensus 289 ~l~~~vd~R~rl~~~~~~~~~~pplp~~y~GN~~~~~~~~~~~~~l~~~~L~~~A~~ir~~i~~ 352 (469)
.+.++++.|...+ + .+.+|+++......+.... +.++.+++..+++.+.+
T Consensus 351 ~~g~~~~gR~~~~-----------~-~~~vG~f~n~lplr~~~~~--~~~~~~~l~~v~~~~~~ 400 (520)
T 2jgp_A 351 IVGTPITGRSHAD-----------L-EPIVGMFVNTLAMRNKPQR--EKTFSEFLQEVKQNALD 400 (520)
T ss_dssp EEEEEECCCCSGG-----------G-TTCCSCCCEEEEEEECCCT--TSBHHHHHHHHHHHHHH
T ss_pred EEEeccCCCCchh-----------h-hccEEeeeeeeeEEecCCC--CCCHHHHHHHHHHHHHH
Confidence 8899999997532 2 3556666554443333321 35778888888877654
No 9
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.17 E-value=7.8e-05 Score=75.56 Aligned_cols=251 Identities=12% Similarity=0.059 Sum_probs=142.9
Q ss_pred HHHHHHHHHHHHhhccccCcEEEecCCCCcEEEecCCCeeEEEEecccccccccCC-CCChhh---h-ccc-CCCC-CCC
Q 012180 63 VDVLKKAMAEALVSYYALAGEVVYNYDGEPELLCNNRGVDFVEAYAEVELRDLNLY-NPDESI---E-GKL-LPKK-KKN 135 (469)
Q Consensus 63 ~~~L~~sL~~~L~~~p~LaGrl~~~~~G~~~i~~~~~gv~~~~a~~~~~l~~l~~~-~p~~~~---~-~~l-~P~~-~~~ 135 (469)
.+.|++++.+++..+|.|--++... +| .+. ....+.+.+. |+... .+...+ . ... -|.. ...
T Consensus 35 ~~~L~~A~~~lv~rh~~LRt~f~~~-~~--~v~-~~~~~~~~~~-------d~~~~~~~~~~~~~~~~~~~~~~fdl~~~ 103 (436)
T 1l5a_A 35 TTLLLRALHLTVSEIDLFRARFSAQ-GE--LYW-HPFSPPIDYQ-------DLSIHLEAEPLAWRQIEQDLQRSSTLIDA 103 (436)
T ss_dssp HHHHHHHHHHHHHTCGGGGEEECTT-CC--EEE-CSSCCCCEEE-------ECTTCTTHHHHHHHHHHHHHTSCCCCBTS
T ss_pred HHHHHHHHHHHHHHhheeEEEEEec-CC--eEC-CCcCCCccEE-------eCCCCCCHHHHHHHHHHHHhcCCCCcCCC
Confidence 7999999999999999999998753 34 332 2212222211 12110 000001 0 111 1221 246
Q ss_pred CeeEEEEeEEecCeEEEEccccccccccccHHHHHHHHHHHHh----cCCCCCCC-CcC------ccccCCCCCCCCCCc
Q 012180 136 GLLSVQATELKCGGIVVACTLDHRIADAYSTNMFLVSWAEIAQ----SKPMSVLP-SFR------RSILNPRRPLCIDHA 204 (469)
Q Consensus 136 pll~vQvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r----g~~~~~~P-~~d------r~~l~~~~~p~~~~~ 204 (469)
|++++.+.+...+...|.+.+||.++||.|+..|++.+.+.++ |.+....+ .+. +..+..... .....
T Consensus 104 pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 182 (436)
T 1l5a_A 104 PITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQTPTAAFKPYQSYLEEEAAYLTSHRY-WQDKQ 182 (436)
T ss_dssp CSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCHHHHHHHHHHHHTSHHH-HHHHH
T ss_pred CCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCCCCCCccCHHHHHHHHHHhhccHhH-HHHHH
Confidence 8888888777668899999999999999999999999999887 44432111 111 001110000 00000
Q ss_pred cccccCCCCCCCC-CCCCCCCCCccCCCCceEEEEEeCHHHHHHHHHHccCCCCCCChhHHHHHHHHHHHHhhCCCCCCC
Q 012180 205 FDDMYLPISSLPP-PPPPNNTPEEANGNNLISRIYYIKSEQLNELQLLASSDECKRTKLESFSAYLWKMVALSGNDNDGS 283 (469)
Q Consensus 205 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~St~d~l~A~lW~~~~~Ar~~~~~~ 283 (469)
+|.++. ...+. ...+... ...........+.++.+..++|++.+... .+|.+.++.|.+-..+.+-.
T Consensus 183 ~W~~~l--~~~~~~~~lp~~~--~~~~~~~~~~~~~l~~~~~~~l~~~a~~~--~~t~~~~l~aa~~~~L~~~~------ 250 (436)
T 1l5a_A 183 FWQGYL--REAPDLTLTSATY--DPQLSHAVSLSYTLNSQLNHLLLKLANAN--QIGWPDALVALCALYLESAE------ 250 (436)
T ss_dssp HHHHHH--HTSCCCCBCCTTC--CGGGCCEEEEEEECCHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHS------
T ss_pred HHHHHh--cCCCCcccCCCCC--CCCcccceeeEEecCHHHHHHHHHHHHHh--CCCHHHHHHHHHHHHHHHhh------
Confidence 121110 00000 0001000 01122345678899999999999998875 48999998886554444432
Q ss_pred CCceEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCccccccccccccchhhhhcCcHHHHHHHHHHHHHh
Q 012180 284 GTRISKMGVVVDGRTRLSSSKGDHVNKSISMDSYFGNVLSVPFGGQKVNELIEKPLSWVAKRVHDFLEN 352 (469)
Q Consensus 284 ~~~~~~l~~~vd~R~rl~~~~~~~~~~pplp~~y~GN~~~~~~~~~~~~~l~~~~L~~~A~~ir~~i~~ 352 (469)
. ....+.++++.|..-. + .+.+|+++-.....+.... +.++.+++..+++.+.+
T Consensus 251 g-~dv~ig~~~~~R~~~~-----------~-~~~vG~f~n~lplr~~~~~--~~t~~~~l~~v~~~~~~ 304 (436)
T 1l5a_A 251 P-DAPWLWLPFMNRWGSV-----------A-ANVPGLMVNSLPLLRLSAQ--QTSLGNYLKQSGQAIRS 304 (436)
T ss_dssp T-TCCEEEEEECCCTTSG-----------G-GGSCSCCCEEEEEECCCCT--TCBHHHHHHHHHHHHHH
T ss_pred C-CceEEeeecccCCChH-----------H-hcCcceEEEEEEEEEecCC--CCCHHHHHHHHHHHHHH
Confidence 3 5678899999996532 2 4556666544433333321 35788888888877755
No 10
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=98.07 E-value=0.00025 Score=82.20 Aligned_cols=261 Identities=13% Similarity=0.132 Sum_probs=147.3
Q ss_pred HHHHHHHHHHHHhhccccCcEEEecCCCC-cEEEecCCCeeEEEEecccccccccCCCCCh----hh---hc-c-cCCCC
Q 012180 63 VDVLKKAMAEALVSYYALAGEVVYNYDGE-PELLCNNRGVDFVEAYAEVELRDLNLYNPDE----SI---EG-K-LLPKK 132 (469)
Q Consensus 63 ~~~L~~sL~~~L~~~p~LaGrl~~~~~G~-~~i~~~~~gv~~~~a~~~~~l~~l~~~~p~~----~~---~~-~-l~P~~ 132 (469)
++.|++++.+++..++.|--++....+|. .++......+.+.+.+ +.. .+.. .+ .. . --|..
T Consensus 49 ~~~l~~A~~~lv~rH~~LRt~f~~~~~~~p~Q~v~~~~~~~~~~~d-------~~~-~~~~~~~~~~~~~~~~~~~~~fd 120 (1304)
T 2vsq_A 49 IKCLEESMNVIMDRYDVFRTVFIHEKVKRPVQVVLKKRQFHIEEID-------LTH-LTGSEQTAKINEYKEQDKIRGFD 120 (1304)
T ss_dssp HHHHHHHHHHHHHHCGGGGEEEECSSCSSCEEEEESCCCCCEEEEE-------CTT-SCHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHhhhhceEEEEEcCCCeEEEEECCCCCCceEEEE-------CCC-CCchhHHHHHHHHHHHHhcCCCC
Confidence 79999999999999999999988655443 3333333233332221 110 0100 00 00 0 01221
Q ss_pred -CCCCeeEEEEeEEecCeEEEEccccccccccccHHHHHHHHHHHHhc----CCCCCCC--Cc-Cc-cccCCCCCCCCCC
Q 012180 133 -KKNGLLSVQATELKCGGIVVACTLDHRIADAYSTNMFLVSWAEIAQS----KPMSVLP--SF-RR-SILNPRRPLCIDH 203 (469)
Q Consensus 133 -~~~pll~vQvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg----~~~~~~P--~~-dr-~~l~~~~~p~~~~ 203 (469)
...|++++.+.+...+...|.+.+||.++||.|+..+++.+.+++++ .+....| .+ |- ..+...+. ....
T Consensus 121 l~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~~~l~~~~~y~d~~~~~~~~~~-~~~~ 199 (1304)
T 2vsq_A 121 LTRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNALREQKPYSLPPVKPYKDYIKWLEKQDK-QASL 199 (1304)
T ss_dssp TTTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCTHHHHHHHHTSCH-HHHH
T ss_pred CCCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHhhcCCCCCCCCcccHHHHHHHHhcchh-hHHH
Confidence 24689999988877788999999999999999999999999998863 3321111 11 10 00110000 0000
Q ss_pred ccccccCCCCCCCCC-CCCCCCCCccCCCCceEEEEEeCHHHHHHHHHHccCCCCCCChhHHHHHHHHHHHHhhCCCCCC
Q 012180 204 AFDDMYLPISSLPPP-PPPNNTPEEANGNNLISRIYYIKSEQLNELQLLASSDECKRTKLESFSAYLWKMVALSGNDNDG 282 (469)
Q Consensus 204 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~St~d~l~A~lW~~~~~Ar~~~~~ 282 (469)
.+|.++- ...+.+ ..+................+.++++..++|++.++..+ +|.+.++.|.+-..+.|--.
T Consensus 200 ~yW~~~L--~~~~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~~--~T~~~vllaa~a~~L~r~tg---- 271 (1304)
T 2vsq_A 200 RYWREYL--EGFEGQTTFAEQRKKQKDGYEPKELLFSPSEAETKAFTELAKSQH--TTLSTALQAVWSVLISRYQQ---- 271 (1304)
T ss_dssp HHHHHHH--TTCCCCCTTTTTCCCSSCCCCEEEEEECCCHHHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHT----
T ss_pred HHHHHHh--CCCCccccCCCCCCccccccCcceEEEecCHHHHHHHHHHHHHcC--CCHHHHHHHHHHHHHHHhcC----
Confidence 0111110 001100 00100000011123456678899999999999998754 89999888865444444332
Q ss_pred CCCceEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCccccccccccccchhhhhcCcHHHHHHHHHHHHHhcC
Q 012180 283 SGTRISKMGVVVDGRTRLSSSKGDHVNKSISMDSYFGNVLSVPFGGQKVNELIEKPLSWVAKRVHDFLENAV 354 (469)
Q Consensus 283 ~~~~~~~l~~~vd~R~rl~~~~~~~~~~pplp~~y~GN~~~~~~~~~~~~~l~~~~L~~~A~~ir~~i~~~~ 354 (469)
.....+.++++.|.... +.+ ++.+|+.+-.....+.... +.++.++...+++.+.+..
T Consensus 272 --~~dvv~G~pvsgR~~~~---------~~~-~~~vG~fvntlplr~~~~~--~~s~~~ll~~v~~~~~~a~ 329 (1304)
T 2vsq_A 272 --SGDLAFGTVVSGRPAEI---------KGV-EHMVGLFINVVPRRVKLSE--GITFNGLLKRLQEQSLQSE 329 (1304)
T ss_dssp --CSEEEEEEEECCCCTTS---------TTG-GGCCSSCCEEEEEEEECCT--TCBHHHHHHHHHHHHHHHG
T ss_pred --CCCEEEEEEeCCCCccc---------hhh-hcccccceeEEEEEecCCC--CCcHHHHHHHHHHHHHHhh
Confidence 34688999999997632 112 3455655543333333321 3678888888888775533
No 11
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=98.03 E-value=0.00017 Score=73.66 Aligned_cols=291 Identities=14% Similarity=0.064 Sum_probs=158.6
Q ss_pred CCCeecCCcccCcC-----C--ceeeEEEEEEcCCCCCCCCCCCcHHHHHHHHHHHHHhhccccCcEEEecCCCCcEEEe
Q 012180 24 QEHWLPLSNLDLLL-----P--AIDFGVFFCYKKPTAADFGSFGSTVDVLKKAMAEALVSYYALAGEVVYNYDGEPELLC 96 (469)
Q Consensus 24 ~~~~~~LS~lD~~~-----~--~~~~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~G~~~i~~ 96 (469)
....+|||+..+++ + ..|. ..+.++.+.. . ..+.|+++|.+++..++.|--++...+ |.+.-..
T Consensus 14 ~~~~~pls~~Q~~~~~~~~~~~~~y~-~~~~~~l~g~-----l--d~~~L~~Al~~lv~rh~~LRt~f~~~~-~~~~q~v 84 (466)
T 2xhg_A 14 IAGNVPLTPIQKWFFGKNFTNTGHWN-QSSVLYRPEG-----F--DPKVIQSVMDKIIEHHDALRMVYQHEN-GNVVQHN 84 (466)
T ss_dssp CCEECCCCHHHHHHHHTTCTTTTCBE-EEEEEEETTC-----C--CHHHHHHHHHHHHHHSGGGGEEEECGG-GCCEEEE
T ss_pred cCCCCCCCHHHHHHHhCCCCCcCcce-eEEEEEcCCC-----C--CHHHHHHHHHHHHHhChHhheEEecCC-Cceeeec
Confidence 35678888776531 1 2332 3344454332 1 279999999999999999999998654 4443322
Q ss_pred cC---CCeeEEEEecccccccccCCCCChh---hhccc-CCCC-CCCCeeEEEEeEEecCeEEEEccccccccccccHHH
Q 012180 97 NN---RGVDFVEAYAEVELRDLNLYNPDES---IEGKL-LPKK-KKNGLLSVQATELKCGGIVVACTLDHRIADAYSTNM 168 (469)
Q Consensus 97 ~~---~gv~~~~a~~~~~l~~l~~~~p~~~---~~~~l-~P~~-~~~pll~vQvt~f~~GG~~l~~~~~H~v~Dg~~~~~ 168 (469)
.+ ..+.+.+.+... .++ .... +...+ -|.. ...|++++.+.... ++-.|-+.+||.++||.|+..
T Consensus 85 ~~~~~~~~~~~~~d~~~-~~~-----~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~~-~~~~l~l~~HH~i~Dg~S~~~ 157 (466)
T 2xhg_A 85 RGLGGQLYDFFSYNLTA-QPD-----VQQAIEAETQRLHSSMNLQEGPLVKVALFQTL-HGDHLFLAIHHLVVDGISWRI 157 (466)
T ss_dssp CCSSSCCCEEEEEECTT-CSC-----HHHHHHHHHHHHHTTCCTTTCCCEEEEEEEET-TEEEEEEEEEGGGCCHHHHHH
T ss_pred cccccccceeEEEecCC-ccc-----HHHHHHHHHHHHHhccCCCCCCeEEEEEEEcC-CCCEEEEEeeeeeechhhHHH
Confidence 22 223332222110 000 0000 00111 1221 24689988887765 444477999999999999999
Q ss_pred HHHHHHHHHh----cCCCCCCC---Cc-C-----ccccCCCCCCCCCCccccccC---CCCCCCCCCCCCCCCCccCCCC
Q 012180 169 FLVSWAEIAQ----SKPMSVLP---SF-R-----RSILNPRRPLCIDHAFDDMYL---PISSLPPPPPPNNTPEEANGNN 232 (469)
Q Consensus 169 fl~~wa~~~r----g~~~~~~P---~~-d-----r~~l~~~~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 232 (469)
|++.+.++++ |.+....| .+ + +..+..... .....+|..+. +...++... +. . ......
T Consensus 158 l~~el~~~Y~~~~~g~~~~l~~~~~~y~~~~~~~~~~~~~~~~-~~~~~~W~~~l~~~~~~~lp~~~-~~--~-~~~~~~ 232 (466)
T 2xhg_A 158 LFEDLATGYAQALAGQAISLPEKTDSFQSWSQWLQEYANEADL-LSEIPYWESLESQAKNVSLPKDY-EV--T-DCKQKS 232 (466)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCCCCSCHHHHHHHHHHHTTSHHH-HTTHHHHHHHHHHCCCCCCCCSS-CC--S-SCBGGG
T ss_pred HHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHhcCccc-hhhhHHHHHhhccCCcccCCccc-cc--c-cccccc
Confidence 9999999886 33322111 11 0 000100000 00001111110 111111100 00 0 011123
Q ss_pred ceEEEEEeCHHHHHHHHHHccCCCCCCChhHHHHHHHHHHHHhhCCCCCCCCCceEEEEEEEeCCCCCCCCCCCCCCCCC
Q 012180 233 LISRIYYIKSEQLNELQLLASSDECKRTKLESFSAYLWKMVALSGNDNDGSGTRISKMGVVVDGRTRLSSSKGDHVNKSI 312 (469)
Q Consensus 233 ~~~~~f~~~~~~l~~Lk~~~~~~~~~~St~d~l~A~lW~~~~~Ar~~~~~~~~~~~~l~~~vd~R~rl~~~~~~~~~~pp 312 (469)
.....+.++.+..++|++.+... ..+|.++++.|.+-..+.+-.. .....+.++++.|..... .+
T Consensus 233 ~~~~~~~l~~~~~~~l~~~~~~~-~~~t~~~~llaa~~~~l~~~~~------~~dv~ig~~~~gR~~~~~--------~~ 297 (466)
T 2xhg_A 233 VRNMRIRLHPEETEQLLKHANQA-YQTEINDLLLAALGLAFAEWSK------LAQIVIHLEGHGREDIIE--------QA 297 (466)
T ss_dssp EEEEEEECCHHHHHHHHHTGGGT-TTCCHHHHHHHHHHHHHHHHHC------CSEEEEEEEECCCCSCST--------TC
T ss_pred ceEEEEEcCHHHHHHHHHHhHHh-hCCCHHHHHHHHHHHHHHHHhC------CCceEEEecCCCCCcccc--------CC
Confidence 45677899999999999877432 2478999988876666655533 346788999999976421 01
Q ss_pred CCCCCccccccccccccchhhhhcCcHHHHHHHHHHHHHh
Q 012180 313 SMDSYFGNVLSVPFGGQKVNELIEKPLSWVAKRVHDFLEN 352 (469)
Q Consensus 313 lp~~y~GN~~~~~~~~~~~~~l~~~~L~~~A~~ir~~i~~ 352 (469)
--.+.+|+.+......+.... +.++.+++..|++.+.+
T Consensus 298 ~~~~~vG~f~n~lplr~~~~~--~~~~~~~l~~v~~~~~~ 335 (466)
T 2xhg_A 298 NVARTVGWFTSQYPVLLDLKQ--TAPLSDYIKLTKENMRK 335 (466)
T ss_dssp CCTTCCSCCCEEEEEEEECSC--CCSHHHHHHHHHHHHHH
T ss_pred CccccccceeeeccEEEecCC--CCCHHHHHHHHHHHHHh
Confidence 123556666554333333321 35788899999998865
No 12
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=97.78 E-value=0.0016 Score=67.62 Aligned_cols=267 Identities=11% Similarity=0.026 Sum_probs=139.6
Q ss_pred CcHHHHHHHHHHHHHhhccccCcEEEecCCCCcEEEecC-CC---------eeEEEEecccccccc----------cC-C
Q 012180 60 GSTVDVLKKAMAEALVSYYALAGEVVYNYDGEPELLCNN-RG---------VDFVEAYAEVELRDL----------NL-Y 118 (469)
Q Consensus 60 ~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~G~~~i~~~~-~g---------v~~~~a~~~~~l~~l----------~~-~ 118 (469)
+++.+.||.|.-.+--++|-+|+++..++.+.....+.. .. =-|++...+.+-+|+ .. .
T Consensus 72 ~~l~~~lr~AW~~lR~~hP~iA~~v~~d~~~~~~~~Y~~~~~~~~~~~Wl~~Tf~v~~~~~t~~e~~~~~~~~r~~~~~~ 151 (519)
T 3fot_A 72 QNLKEMFELALLDARFEHPECACTVSWDDEVPAIITYESPESNESARDWARGCIHVQPTAKSALDLWSEMEEGRAAANDN 151 (519)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGGCEEECCSSSSCEEEEECCSSHHHHHHHHHHHEEEEECSCCHHHHHHHHHHHHHHTC-C
T ss_pred HHHHHHHHHHHHHHHhhCCcceeEEeeCCCCcccEEEecCCCHHHHHHHHHhcEEEeCCCCCHHHHHHhhhhhhcccccC
Confidence 466888999999888899999999987643444444421 01 024443333333333 11 1
Q ss_pred CCChhhhcc--cCCCC-CCCCeeEEEEeEEecC--eEEEEccccccccccccHHHHHHHHHHHHhcCC---C-CCCCCcC
Q 012180 119 NPDESIEGK--LLPKK-KKNGLLSVQATELKCG--GIVVACTLDHRIADAYSTNMFLVSWAEIAQSKP---M-SVLPSFR 189 (469)
Q Consensus 119 ~p~~~~~~~--l~P~~-~~~pll~vQvt~f~~G--G~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg~~---~-~~~P~~d 189 (469)
.|... ..- +.|.. ++.| +. + -.-|.+.+||.++||.|...|++.+-+...... . ...|.++
T Consensus 152 ~p~~~-~~l~~v~~~~~~~~~--------~p-~~~~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~~~~~~~~ 221 (519)
T 3fot_A 152 TPSKS-IELFLLSDVSTDSTP--------IP-QDATVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDSREMKKIQ 221 (519)
T ss_dssp CCCCS-CEEEEEESSSSTTSC--------CC-TTCEEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CGGGSCCCC
T ss_pred CCccc-eEEEEEecccccccc--------CC-CCceEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccCCccCCCcCC
Confidence 12110 000 00110 0011 21 3 466778899999999999999999988776311 0 1123232
Q ss_pred -cc---ccCC------CCCCC-CCCcc---ccccC-----CCCCCCCCCCCCCCCCccCCCCceEEEEEeCHHHHHHHHH
Q 012180 190 -RS---ILNP------RRPLC-IDHAF---DDMYL-----PISSLPPPPPPNNTPEEANGNNLISRIYYIKSEQLNELQL 250 (469)
Q Consensus 190 -r~---~l~~------~~~p~-~~~~~---~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~l~~Lk~ 250 (469)
.+ -|.+ ..|.. ..++. ..++. ....... +. ......-....+.|++++.++|++
T Consensus 222 ~g~E~~~L~P~~e~~~~~p~~~~~~e~~~~~~~~~~~~~~~~~~~~~---P~----~~~~~~~~~~~~~ls~~~t~~L~~ 294 (519)
T 3fot_A 222 WGQEIKNLSPPVVDSLKLDINTLGSEFDDKCTEYTSALVANYKSRGM---KF----QPGLALPRCVIHKLSADESIDIVK 294 (519)
T ss_dssp TTTTGGGSCCCTGGGBSSCGGGCCHHHHHHHHHHHHHHHHHHHSCCS---BC----CCCCCCEEEEEEECCHHHHHHHHH
T ss_pred CCcccccCCcCHHHHhCCCCCCCCHHHHHHHHHHHHHhhcCCCcccC---CC----CCCCCCcceEEEEcCHHHHHHHHH
Confidence 11 1111 00000 00000 00000 0000010 00 011122345678899999999999
Q ss_pred HccCC-CCCCChhHHHHHHHHHHHHhhCCCCCCCCCceEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccc
Q 012180 251 LASSD-ECKRTKLESFSAYLWKMVALSGNDNDGSGTRISKMGVVVDGRTRLSSSKGDHVNKSISMDSYFGNVLSVPFGGQ 329 (469)
Q Consensus 251 ~~~~~-~~~~St~d~l~A~lW~~~~~Ar~~~~~~~~~~~~l~~~vd~R~rl~~~~~~~~~~pplp~~y~GN~~~~~~~~~ 329 (469)
.|++. +..+|-..+|.|.+-.++.+................++||+|+.+. ++...+|||.+........
T Consensus 295 ~ck~~~~~g~Tvt~~l~Aa~~~al~~~~~~~~~~~~~~~~~~~pvnlR~~l~---------~~~~~n~~~~~~~~~~~~v 365 (519)
T 3fot_A 295 AVKTRLGPGFTISHLTQAAIVLALLDHLKPNDLSDDEVFISPTSVDGRRWLR---------EDIASNFYAMCQTAAVVRI 365 (519)
T ss_dssp HHHHHTCTTCCHHHHHHHHHHHHHHHHC----CCTTCCEEEEEEEECGGGBC---------HHHHTSCCSCCEEEEEEEE
T ss_pred HHHhcCCCCeeHHHHHHHHHHHHHHhhcCCcccCCCccEEEEeeeeccccCC---------CcccccccceeeeeeeeEe
Confidence 99875 2348999999877666666542210011233578899999999997 4555678887766433322
Q ss_pred c----------hhhhhcCc-HHHHHHHHHHHHHh
Q 012180 330 K----------VNELIEKP-LSWVAKRVHDFLEN 352 (469)
Q Consensus 330 ~----------~~~l~~~~-L~~~A~~ir~~i~~ 352 (469)
+ .+|+...- +.++++.+++....
T Consensus 366 ~~i~~~~~~~~~~e~~~~~~~~~~ar~l~~~y~~ 399 (519)
T 3fot_A 366 ENLKSITVSHKDEKELQVRALESACRNIKKSYRQ 399 (519)
T ss_dssp CCGGGGCCCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCccccccccchhhhhhHhHHHHHHHHHHHHhhc
Confidence 1 11111111 56667777775543
No 13
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=62.94 E-value=3.9 Score=36.77 Aligned_cols=44 Identities=9% Similarity=0.305 Sum_probs=33.0
Q ss_pred CCeeEEEEeEEecCe--EEEEccccccccccccHHHHHHHHHHHHh
Q 012180 135 NGLLSVQATELKCGG--IVVACTLDHRIADAYSTNMFLVSWAEIAQ 178 (469)
Q Consensus 135 ~pll~vQvt~f~~GG--~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 178 (469)
.|++.+--..-..|. +-|++++||.+.||.-...|++.+.+.+.
T Consensus 164 ~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 164 APIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp SCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred ccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 477764322222233 78899999999999999999999998764
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=61.65 E-value=4.3 Score=36.65 Aligned_cols=43 Identities=19% Similarity=0.291 Sum_probs=31.4
Q ss_pred CCeeEEEEeEEecCe--EEEEccccccccccccHHHHHHHHHHHH
Q 012180 135 NGLLSVQATELKCGG--IVVACTLDHRIADAYSTNMFLVSWAEIA 177 (469)
Q Consensus 135 ~pll~vQvt~f~~GG--~~l~~~~~H~v~Dg~~~~~fl~~wa~~~ 177 (469)
.|++.+=-..-.+|. +-|++++||.+.||.-...|++.+.+.+
T Consensus 172 ~PIi~~Gk~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 172 YPLLNAGKAIIREGRLVMPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEecceEEEECCcEEEEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 477654222112233 6889999999999999999999998764
No 15
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=60.86 E-value=4.5 Score=36.56 Aligned_cols=44 Identities=9% Similarity=0.192 Sum_probs=33.3
Q ss_pred CCeeEEEEeEEecCe--EEEEccccccccccccHHHHHHHHHHHHh
Q 012180 135 NGLLSVQATELKCGG--IVVACTLDHRIADAYSTNMFLVSWAEIAQ 178 (469)
Q Consensus 135 ~pll~vQvt~f~~GG--~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 178 (469)
.|++.+--..-++|. +-|++++||.+.||.-...|++.+.+.+.
T Consensus 168 ~pIi~~G~~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 213 (219)
T 1q23_A 168 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCD 213 (219)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEecccEEEECCcEEEEEEEEEEchhhChHHHHHHHHHHHHHHh
Confidence 477765333222233 78899999999999999999999998774
No 16
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=59.23 E-value=5.4 Score=36.54 Aligned_cols=29 Identities=21% Similarity=0.393 Sum_probs=27.2
Q ss_pred EEEEccccccccccccHHHHHHHHHHHHh
Q 012180 150 IVVACTLDHRIADAYSTNMFLVSWAEIAQ 178 (469)
Q Consensus 150 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 178 (469)
+-|++++||.+.||.-...|++.+.+.+.
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le 232 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLE 232 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHh
Confidence 88999999999999999999999998774
No 17
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=56.33 E-value=5.9 Score=36.40 Aligned_cols=29 Identities=10% Similarity=0.257 Sum_probs=27.0
Q ss_pred EEEEccccccccccccHHHHHHHHHHHHh
Q 012180 150 IVVACTLDHRIADAYSTNMFLVSWAEIAQ 178 (469)
Q Consensus 150 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 178 (469)
+-|+++++|.+.||.-...|++.+.+.+.
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le 236 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLA 236 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHh
Confidence 67999999999999999999999998875
No 18
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=56.01 E-value=6 Score=36.07 Aligned_cols=29 Identities=31% Similarity=0.495 Sum_probs=27.0
Q ss_pred EEEEccccccccccccHHHHHHHHHHHHh
Q 012180 150 IVVACTLDHRIADAYSTNMFLVSWAEIAQ 178 (469)
Q Consensus 150 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 178 (469)
+-|+++++|.+.||.-...|++.+.+.+.
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le 224 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLE 224 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHh
Confidence 66999999999999999999999998875
No 19
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=55.02 E-value=5.4 Score=36.13 Aligned_cols=29 Identities=21% Similarity=0.454 Sum_probs=26.9
Q ss_pred EEEEccccccccccccHHHHHHHHHHHHh
Q 012180 150 IVVACTLDHRIADAYSTNMFLVSWAEIAQ 178 (469)
Q Consensus 150 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 178 (469)
+-|+++++|.+.||.-...|++.+.+...
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le 215 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIE 215 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHT
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHh
Confidence 55899999999999999999999999885
No 20
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=54.52 E-value=6.5 Score=36.55 Aligned_cols=29 Identities=28% Similarity=0.470 Sum_probs=26.9
Q ss_pred EEEEccccccccccccHHHHHHHHHHHHh
Q 012180 150 IVVACTLDHRIADAYSTNMFLVSWAEIAQ 178 (469)
Q Consensus 150 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 178 (469)
+-|+++++|.+.||.-...|++.+.+.+.
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le 252 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLE 252 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHh
Confidence 67999999999999999999999998875
No 21
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=48.16 E-value=9.5 Score=35.29 Aligned_cols=30 Identities=23% Similarity=0.383 Sum_probs=27.5
Q ss_pred EEEEccccccccccccHHHHHHHHHHHHhc
Q 012180 150 IVVACTLDHRIADAYSTNMFLVSWAEIAQS 179 (469)
Q Consensus 150 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 179 (469)
+-|+++++|.+.||.-...|++.+.+.+..
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 239 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVEK 239 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHhC
Confidence 569999999999999999999999998863
No 22
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=46.84 E-value=10 Score=34.92 Aligned_cols=29 Identities=21% Similarity=0.621 Sum_probs=27.1
Q ss_pred EEEEccccccccccccHHHHHHHHHHHHh
Q 012180 150 IVVACTLDHRIADAYSTNMFLVSWAEIAQ 178 (469)
Q Consensus 150 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 178 (469)
+-|+++++|.+.||.-...|++.+.+.+.
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le 233 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIE 233 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHh
Confidence 56999999999999999999999999886
No 23
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=44.29 E-value=31 Score=24.21 Aligned_cols=37 Identities=27% Similarity=0.484 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHhhccccCcEEEecCCC-CcEEEecC
Q 012180 62 TVDVLKKAMAEALVSYYALAGEVVYNYDG-EPELLCNN 98 (469)
Q Consensus 62 ~~~~L~~sL~~~L~~~p~LaGrl~~~~~G-~~~i~~~~ 98 (469)
.++.+.++|.+.+.+-..+||.+...-+| .++|++.+
T Consensus 11 dleafekalkemirqarkfagtvtytldgndleiritg 48 (85)
T 2kl8_A 11 DLEAFEKALKEMIRQARKFAGTVTYTLDGNDLEIRITG 48 (85)
T ss_dssp SHHHHHHHHHHHHHHHTTTTCEEEEEECSSCEEEEEES
T ss_pred cHHHHHHHHHHHHHHHHhhcceEEEEecCCeeEEEEec
Confidence 37899999999999999999999877554 57887764
No 24
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=34.42 E-value=66 Score=25.51 Aligned_cols=36 Identities=22% Similarity=0.385 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHhhccccCcEEEecCC-CCcEEEecC
Q 012180 63 VDVLKKAMAEALVSYYALAGEVVYNYD-GEPELLCNN 98 (469)
Q Consensus 63 ~~~L~~sL~~~L~~~p~LaGrl~~~~~-G~~~i~~~~ 98 (469)
.+.|.++|.+.+.+-..+||.+...-+ ++++|.+.+
T Consensus 13 lea~ekalkemirqarkfagtvtytl~gn~l~i~itg 49 (170)
T 4hhu_A 13 LEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVITG 49 (170)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEEETTEEEEEEES
T ss_pred HHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEEeC
Confidence 799999999999999999999987654 456776653
No 25
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=34.06 E-value=79 Score=25.06 Aligned_cols=36 Identities=25% Similarity=0.442 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHhhccccCcEEEecCCC-CcEEEecC
Q 012180 63 VDVLKKAMAEALVSYYALAGEVVYNYDG-EPELLCNN 98 (469)
Q Consensus 63 ~~~L~~sL~~~L~~~p~LaGrl~~~~~G-~~~i~~~~ 98 (469)
.+.|.++|.+.+.+-..+||.+...-+| +++|.+.+
T Consensus 94 lea~ekalkemirqarkfagtvtytl~gn~l~i~itg 130 (170)
T 4hhu_A 94 LEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVITG 130 (170)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEECSSEEEEEEES
T ss_pred HHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEEeC
Confidence 7999999999999999999999877544 56776653
No 26
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=33.05 E-value=52 Score=21.69 Aligned_cols=23 Identities=26% Similarity=0.417 Sum_probs=19.5
Q ss_pred eEEEEEeCHHHHHHHHHHccCCC
Q 012180 234 ISRIYYIKSEQLNELQLLASSDE 256 (469)
Q Consensus 234 ~~~~f~~~~~~l~~Lk~~~~~~~ 256 (469)
....|+||.++-+.|++.|.++.
T Consensus 2 ~~Vs~Y~SkEey~~L~klA~eE~ 24 (55)
T 1x93_A 2 RAVSLYFSDEQYQKLEKMANEEE 24 (55)
T ss_dssp EEEEEEECHHHHHHHHHHHHHTT
T ss_pred ceEEEEecHHHHHHHHHHHHHHH
Confidence 35679999999999999997764
No 27
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=31.66 E-value=9.9 Score=38.03 Aligned_cols=29 Identities=17% Similarity=0.330 Sum_probs=0.0
Q ss_pred EEEEccccccccccccHHHHHHHHHHHHh
Q 012180 150 IVVACTLDHRIADAYSTNMFLVSWAEIAQ 178 (469)
Q Consensus 150 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 178 (469)
+-|++++||.+.||.-...|++.+.+++.
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le 419 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIKRLLS 419 (428)
T ss_dssp -----------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHHh
Confidence 45999999999999999999999988775
No 28
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=31.28 E-value=28 Score=19.00 Aligned_cols=18 Identities=22% Similarity=0.355 Sum_probs=15.0
Q ss_pred CCChhHHHHHHHHHHHHh
Q 012180 258 KRTKLESFSAYLWKMVAL 275 (469)
Q Consensus 258 ~~St~d~l~A~lW~~~~~ 275 (469)
-+++.|-|+-++|+++..
T Consensus 7 vftsqdylsdhlwralna 24 (26)
T 2xl1_A 7 VFTSQDYLSDHLWRALNA 24 (26)
T ss_pred eeecHHHHHHHHHHHHhc
Confidence 367889999999998863
No 29
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=24.98 E-value=1.2e+02 Score=20.76 Aligned_cols=41 Identities=20% Similarity=0.289 Sum_probs=30.4
Q ss_pred CceEEEEEeCHHHHHHHHHHccCCCCCCChhHHHHHHHHHHHHhhCC
Q 012180 232 NLISRIYYIKSEQLNELQLLASSDECKRTKLESFSAYLWKMVALSGN 278 (469)
Q Consensus 232 ~~~~~~f~~~~~~l~~Lk~~~~~~~~~~St~d~l~A~lW~~~~~Ar~ 278 (469)
+.....|+||.++-+.|.+.|.++. |.+..++=+.|.++..
T Consensus 14 ~~~~Vs~Y~SkEey~~L~klA~eE~------eSV~sfIKR~IlK~l~ 54 (66)
T 2k1o_A 14 RNFSVTFYLSKEEHDVLRRLADEEV------ESVNSFVKRHILKTII 54 (66)
T ss_dssp CCEEEEEEEEHHHHHHHHHHHHTTC------SCHHHHHHHHHHHHHC
T ss_pred cceEEEEEecHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHH
Confidence 3456789999999999999998764 4455666666666653
Done!