BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012181
(469 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3GNO|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase
pdb|3GNP|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-Glucosidase With
Octyl-Beta- D-Thio-Glucoside
pdb|3GNR|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase With
Covalently Bound 2-deoxy-2-fluoroglucoside To The
Catalytic Nucleophile E396
Length = 488
Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/476 (43%), Positives = 286/476 (60%), Gaps = 59/476 (12%)
Query: 26 SKNDFPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHA-GNV--HGTGDIACDGYHKY 82
++ FP GF+FG +++AYQ EGA EDGR +IWDTFAH G + D+A D YH++
Sbjct: 13 TRGSFPEGFVFGTASAAYQYEGAVKEDGRGQTIWDTFAHTFGKITDFSNADVAVDQYHRF 72
Query: 83 KEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHH 142
+ED++LMAD G+DAYRFSI+WSR+ PNG G VN G+ +YN LI+ L++ GIQP+VTL+H
Sbjct: 73 EEDIQLMADMGMDAYRFSIAWSRIYPNGVGQVNQAGIDHYNKLIDALLAKGIQPYVTLYH 132
Query: 143 FDLPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIA 202
+DLPQALED+Y GW++R IV DF AYA+ CFR+FGDRV +W T+NEP+ A GYD G+
Sbjct: 133 WDLPQALEDKYKGWLDRQIVDDFAAYAETCFREFGDRVKHWITLNEPHTVAIQGYDAGLQ 192
Query: 203 PPQRCSSINH--CSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFG 260
P RCS + H C GNS TEPY+ HH +LAHA+ A +YR KY+ Q G +G+
Sbjct: 193 APGRCSVLLHLYCKAGNSGTEPYVVAHHFILAHAAAASIYRTKYKATQNGQLGIAFDVMW 252
Query: 261 LLPLTNSTEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFSDRESKQVKGS 320
P++N+T D A +R +F +GW A+P +GDYP M+ VG RLP F+ E+ VKG+
Sbjct: 253 FEPMSNTTIDIEAAKRAQEFQLGWFADPFFFGDYPATMRARVGERLPRFTADEAAVVKGA 312
Query: 321 ADFLGVINYYIVYVKDNPSS-----LNKKLRDWN------------ADSATEIFCQNTPR 363
DF+G+ +Y Y + N ++ LN L D D A I+ PR
Sbjct: 313 LDFVGINHYTTYYTRHNNTNIIGTLLNNTLADTGTVSLPFKNGKPIGDRANSIWLYIVPR 372
Query: 364 -----------------------------------RSSLKDISRVKYLHAYIGSVLDAVR 388
+ +LKD R+KY + Y+ ++ +++
Sbjct: 373 GMRSLMNYVKERYNSPPVYITENGMDDSNNPFISIKDALKDSKRIKYHNDYLTNLAASIK 432
Query: 389 -NGSNIRGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFLK 443
+G ++RGYF WS LD +E GY S +GLY+VD D +LKRYPK S W+ LK
Sbjct: 433 EDGCDVRGYFAWSLLDNWEWAAGYSSRFGLYFVDYKD-NLKRYPKNSVQWFKALLK 487
>pdb|3PTK|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTK|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTM|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTM|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTQ|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
pdb|3PTQ|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
Length = 505
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/476 (43%), Positives = 280/476 (58%), Gaps = 61/476 (12%)
Query: 26 SKNDFPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHAGNV----HGTGDIACDGYHK 81
S+ FP GF+FG ++S+YQ EG A E GR PSIWDTF H GD+A D YH
Sbjct: 30 SRRSFPKGFIFGTASSSYQYEGGAAEGGRGPSIWDTFTHQHPEKIADRSNGDVASDSYHL 89
Query: 82 YKEDVKLMADTGLDAYRFSISWSRLIPNG--RGPVNPKGLQYYNNLINELISYGIQPHVT 139
YKEDV+LM D G+DAYRFSISW+R++PNG RG VN +G++YYNNLINEL+S G+QP +T
Sbjct: 90 YKEDVRLMKDMGMDAYRFSISWTRILPNGSLRGGVNKEGIKYYNNLINELLSKGVQPFIT 149
Query: 140 LHHFDLPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDY 199
L H+D PQALED+Y G+++ I+ DF YA++CF++FGDRV W T NEP F + GY
Sbjct: 150 LFHWDSPQALEDKYNGFLSPNIINDFKDYAEICFKEFGDRVKNWITFNEPWTFCSNGYAT 209
Query: 200 GIAPPQRCS--SINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIF 257
G+ P RCS +CS G+S EPY HH LLAHA RLY+ KYQ Q+G IG+ +
Sbjct: 210 GLFAPGRCSPWEKGNCSVGDSGREPYTACHHQLLAHAETVRLYKAKYQALQKGKIGITLV 269
Query: 258 AFGLLPLTNSTEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFSDRESKQV 317
+ +P + S + A +R DF+ GW +PL+ GDYP M+ VG+RLP F+ +SK V
Sbjct: 270 SHWFVPFSRSKSNNDAAKRAIDFMFGWFMDPLIRGDYPLSMRGLVGNRLPQFTKEQSKLV 329
Query: 318 KGSADFLGVINYYIVYVKDNPSSLNKKLRDWNADS------------------------- 352
KG+ DF+G +NYY DN N + DS
Sbjct: 330 KGAFDFIG-LNYYTANYADNLPPSNGLNNSYTTDSRANLTGVRNGIPIGPQAASPWLYVY 388
Query: 353 --------------------------ATEIFCQNTPRRSSLKDISRVKYLHAYIGSVLDA 386
E + P + +LKD +R++Y H ++ S+L A
Sbjct: 389 PQGFRDLLLYVKENYGNPTVYITENGVDEFNNKTLPLQEALKDDARIEYYHKHLLSLLSA 448
Query: 387 VRNGSNIRGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFL 442
+R+G+N++GYF WS LD FE +GY +G+ +VD +D KRYPK SAHW+ +FL
Sbjct: 449 IRDGANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYND-GRKRYPKNSAHWFKKFL 503
>pdb|3SCW|A Chain A, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCW|B Chain B, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/470 (43%), Positives = 271/470 (57%), Gaps = 57/470 (12%)
Query: 26 SKNDFPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHA-GNVHGT--GDIACDGYHKY 82
S+ FP F+FG TSAYQVEG A GR PSIWD FAH GNV G GD+A D YH+Y
Sbjct: 16 SRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRY 75
Query: 83 KEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHH 142
KEDV LM DAYRFSISWSR+ P+G G VN +G+ YYNNLIN L+ GI P+V L+H
Sbjct: 76 KEDVNLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYH 135
Query: 143 FDLPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIA 202
+DLP ALE +YGGW+N + FT YAD CF+ FG+RV +W T NEP A LGYD G
Sbjct: 136 YDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTN 195
Query: 203 PPQRCSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLL 262
PP+RC+ + GNS+TEPYI H+ LL+HA+ YR KYQ Q+G +G+ +
Sbjct: 196 PPKRCTKC--AAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYE 253
Query: 263 PLTNSTEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFSDRESKQVKGSAD 322
L+NSTED A QR DF IGW +PL+ G YP+IM+ V RLP F+ +++ VKGSAD
Sbjct: 254 ALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSAD 313
Query: 323 FLGVINYYIVYVKDNPSSLNKKLRDWNAD-SATEIFCQ---------------------- 359
++G+ Y Y+K + + ++AD T +F +
Sbjct: 314 YIGINQYTASYMKGQ-QLMQQTPTSYSADWQVTAVFAKNGKPIGPQANSNWLYIVPWGMY 372
Query: 360 --------------------------NTPRRSSLKDISRVKYLHAYIGSVLDAVRNGSNI 393
N R L+D +RV + +Y+ + A+ G+N+
Sbjct: 373 GCVNYIKQKYGNPTVVITGNGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGANV 432
Query: 394 RGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFLK 443
GYF WS LD FE + GY S +G+ YVD + L+R+PK SA+W+ LK
Sbjct: 433 AGYFAWSLLDNFEWLSGYTSKFGIVYVDFN--TLERHPKASAYWFRDMLK 480
>pdb|2RGL|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGL|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
Length = 481
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/470 (43%), Positives = 271/470 (57%), Gaps = 57/470 (12%)
Query: 26 SKNDFPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHA-GNVHGT--GDIACDGYHKY 82
S+ FP F+FG TSAYQVEG A GR PSIWD FAH GNV G GD+A D YH+Y
Sbjct: 16 SRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRY 75
Query: 83 KEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHH 142
KEDV LM DAYRFSISWSR+ P+G G VN +G+ YYNNLIN L+ GI P+V L+H
Sbjct: 76 KEDVNLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYH 135
Query: 143 FDLPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIA 202
+DLP ALE +YGGW+N + FT YAD CF+ FG+RV +W T NEP A LGYD G
Sbjct: 136 YDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTN 195
Query: 203 PPQRCSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLL 262
PP+RC+ + GNS+TEPYI H+ LL+HA+ YR KYQ Q+G +G+ +
Sbjct: 196 PPKRCTKC--AAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYE 253
Query: 263 PLTNSTEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFSDRESKQVKGSAD 322
L+NSTED A QR DF IGW +PL+ G YP+IM+ V RLP F+ +++ VKGSAD
Sbjct: 254 ALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSAD 313
Query: 323 FLGVINYYIVYVKDNPSSLNKKLRDWNAD-SATEIFCQ---------------------- 359
++G+ Y Y+K + + ++AD T +F +
Sbjct: 314 YIGINQYTASYMKGQ-QLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMY 372
Query: 360 --------------------------NTPRRSSLKDISRVKYLHAYIGSVLDAVRNGSNI 393
N R L+D +RV + +Y+ + A+ G+N+
Sbjct: 373 GCVNYIKQKYGNPTVVITENGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGANV 432
Query: 394 RGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFLK 443
GYF WS LD FE + GY S +G+ YVD + L+R+PK SA+W+ LK
Sbjct: 433 AGYFAWSLLDNFEWLSGYTSKFGIVYVDFN--TLERHPKASAYWFRDMLK 480
>pdb|3SCP|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCP|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCQ|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCQ|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/470 (43%), Positives = 271/470 (57%), Gaps = 57/470 (12%)
Query: 26 SKNDFPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHA-GNVHGT--GDIACDGYHKY 82
S+ FP F+FG TSAYQVEG A GR PSIWD FAH GNV G GD+A D YH+Y
Sbjct: 16 SRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRY 75
Query: 83 KEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHH 142
KEDV LM DAYRFSISWSR+ P+G G VN +G+ YYNNLIN L+ GI P+V L+H
Sbjct: 76 KEDVNLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYH 135
Query: 143 FDLPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIA 202
+DLP ALE +YGGW+N + FT YAD CF+ FG+RV +W T NEP A LGYD G
Sbjct: 136 YDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTN 195
Query: 203 PPQRCSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLL 262
PP+RC+ + GNS+TEPYI H+ LL+HA+ YR KYQ Q+G +G+ +
Sbjct: 196 PPKRCTKC--AAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYE 253
Query: 263 PLTNSTEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFSDRESKQVKGSAD 322
L+NSTED A QR DF IGW +PL+ G YP+IM+ V RLP F+ +++ VKGSAD
Sbjct: 254 ALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSAD 313
Query: 323 FLGVINYYIVYVKDNPSSLNKKLRDWNAD-SATEIFCQ---------------------- 359
++G+ Y Y+K + + ++AD T +F +
Sbjct: 314 YIGINQYTASYMKGQ-QLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMY 372
Query: 360 --------------------------NTPRRSSLKDISRVKYLHAYIGSVLDAVRNGSNI 393
N R L+D +RV + +Y+ + A+ G+N+
Sbjct: 373 GCVNYIKQKYGNPTVVITANGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGANV 432
Query: 394 RGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFLK 443
GYF WS LD FE + GY S +G+ YVD + L+R+PK SA+W+ LK
Sbjct: 433 AGYFAWSLLDNFEWLSGYTSKFGIVYVDFN--TLERHPKASAYWFRDMLK 480
>pdb|3SCR|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCR|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCS|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCS|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/470 (43%), Positives = 271/470 (57%), Gaps = 57/470 (12%)
Query: 26 SKNDFPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHA-GNVHGT--GDIACDGYHKY 82
S+ FP F+FG TSAYQVEG A GR PSIWD FAH GNV G GD+A D YH+Y
Sbjct: 16 SRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRY 75
Query: 83 KEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHH 142
KEDV LM DAYRFSISWSR+ P+G G VN +G+ YYNNLIN L+ GI P+V L+H
Sbjct: 76 KEDVNLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYH 135
Query: 143 FDLPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIA 202
+DLP ALE +YGGW+N + FT YAD CF+ FG+RV +W T NEP A LGYD G
Sbjct: 136 YDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTN 195
Query: 203 PPQRCSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLL 262
PP+RC+ + GNS+TEPYI H+ LL+HA+ YR KYQ Q+G +G+ +
Sbjct: 196 PPKRCTKC--AAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYE 253
Query: 263 PLTNSTEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFSDRESKQVKGSAD 322
L+NSTED A QR DF IGW +PL+ G YP+IM+ V RLP F+ +++ VKGSAD
Sbjct: 254 ALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSAD 313
Query: 323 FLGVINYYIVYVKDNPSSLNKKLRDWNAD-SATEIFCQ---------------------- 359
++G+ Y Y+K + + ++AD T +F +
Sbjct: 314 YIGINQYTASYMKGQ-QLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMY 372
Query: 360 --------------------------NTPRRSSLKDISRVKYLHAYIGSVLDAVRNGSNI 393
N R L+D +RV + +Y+ + A+ G+N+
Sbjct: 373 GCVNYIKQKYGNPTVVITSNGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGANV 432
Query: 394 RGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFLK 443
GYF WS LD FE + GY S +G+ YVD + L+R+PK SA+W+ LK
Sbjct: 433 AGYFAWSLLDNFEWLSGYTSKFGIVYVDFN--TLERHPKASAYWFRDMLK 480
>pdb|3SCN|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCN|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCO|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCO|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCT|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCT|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCU|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
pdb|3SCU|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
Length = 481
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/470 (43%), Positives = 271/470 (57%), Gaps = 57/470 (12%)
Query: 26 SKNDFPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHA-GNVHGT--GDIACDGYHKY 82
S+ FP F+FG TSAYQVEG A GR PSIWD FAH GNV G GD+A D YH+Y
Sbjct: 16 SRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRY 75
Query: 83 KEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHH 142
KEDV LM DAYRFSISWSR+ P+G G VN +G+ YYNNLIN L+ GI P+V L+H
Sbjct: 76 KEDVNLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYH 135
Query: 143 FDLPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIA 202
+DLP ALE +YGGW+N + FT YAD CF+ FG+RV +W T NEP A LGYD G
Sbjct: 136 YDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTN 195
Query: 203 PPQRCSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLL 262
PP+RC+ + GNS+TEPYI H+ LL+HA+ YR KYQ Q+G +G+ +
Sbjct: 196 PPKRCTKC--AAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYE 253
Query: 263 PLTNSTEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFSDRESKQVKGSAD 322
L+NSTED A QR DF IGW +PL+ G YP+IM+ V RLP F+ +++ VKGSAD
Sbjct: 254 ALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSAD 313
Query: 323 FLGVINYYIVYVKDNPSSLNKKLRDWNAD-SATEIFCQ---------------------- 359
++G+ Y Y+K + + ++AD T +F +
Sbjct: 314 YIGINQYTASYMKGQ-QLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMY 372
Query: 360 --------------------------NTPRRSSLKDISRVKYLHAYIGSVLDAVRNGSNI 393
N R L+D +RV + +Y+ + A+ G+N+
Sbjct: 373 GCVNYIKQKYGNPTVVITGNGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGANV 432
Query: 394 RGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFLK 443
GYF WS LD FE + GY S +G+ YVD + L+R+PK SA+W+ LK
Sbjct: 433 AGYFAWSLLDNFEWLSGYTSKFGIVYVDFN--TLERHPKASAYWFRDMLK 480
>pdb|3SCV|A Chain A, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCV|B Chain B, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 381 bits (978), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/470 (43%), Positives = 270/470 (57%), Gaps = 57/470 (12%)
Query: 26 SKNDFPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHA-GNVHGT--GDIACDGYHKY 82
S+ FP F+FG TSAYQVEG A GR PSIWD FAH GNV G GD+A D YH+Y
Sbjct: 16 SRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRY 75
Query: 83 KEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHH 142
KEDV LM DAYRFSISWSR+ P+G G VN +G+ YYNNLIN L+ GI P+V L+H
Sbjct: 76 KEDVNLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYH 135
Query: 143 FDLPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIA 202
+DLP ALE +YGGW+N + FT YAD CF+ FG+RV +W T NEP A LGYD G
Sbjct: 136 YDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTN 195
Query: 203 PPQRCSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLL 262
PP+RC+ + GNS+TEPYI H+ LL+HA+ YR KYQ Q+G +G+ +
Sbjct: 196 PPKRCTKC--AAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYE 253
Query: 263 PLTNSTEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFSDRESKQVKGSAD 322
L+NSTED A QR DF IGW +PL+ G YP+IM+ V RLP F+ +++ VKGSAD
Sbjct: 254 ALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSAD 313
Query: 323 FLGVINYYIVYVKDNPSSLNKKLRDWNAD-SATEIFCQ---------------------- 359
++G+ Y Y+K + + + AD T +F +
Sbjct: 314 YIGINQYTASYMKGQ-QLMQQTPTSYAADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMY 372
Query: 360 --------------------------NTPRRSSLKDISRVKYLHAYIGSVLDAVRNGSNI 393
N R L+D +RV + +Y+ + A+ G+N+
Sbjct: 373 GCVNYIKQKYGNPTVVITGNGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGANV 432
Query: 394 RGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFLK 443
GYF WS LD FE + GY S +G+ YVD + L+R+PK SA+W+ LK
Sbjct: 433 AGYFAWSLLDNFEWLSGYTSKFGIVYVDFN--TLERHPKASAYWFRDMLK 480
>pdb|3F4V|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F4V|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3AHT|A Chain A, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHT|B Chain B, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHV|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
pdb|3AHV|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
Length = 481
Score = 380 bits (976), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/470 (43%), Positives = 271/470 (57%), Gaps = 57/470 (12%)
Query: 26 SKNDFPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHA-GNVHGT--GDIACDGYHKY 82
S+ FP F+FG TSAYQVEG A GR PSIWD FAH GNV G GD+A D YH+Y
Sbjct: 16 SRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRY 75
Query: 83 KEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHH 142
KEDV LM DAYRFSISWSR+ P+G G VN +G+ YYNNLIN L+ GI P+V L+H
Sbjct: 76 KEDVNLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYH 135
Query: 143 FDLPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIA 202
+DLP ALE +YGGW+N + FT YAD CF+ FG+RV +W T N+P A LGYD G
Sbjct: 136 YDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNQPRIVALLGYDQGTN 195
Query: 203 PPQRCSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLL 262
PP+RC+ + GNS+TEPYI H+ LL+HA+ YR KYQ Q+G +G+ +
Sbjct: 196 PPKRCTKC--AAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYE 253
Query: 263 PLTNSTEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFSDRESKQVKGSAD 322
L+NSTED A QR DF IGW +PL+ G YP+IM+ V RLP F+ +++ VKGSAD
Sbjct: 254 ALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSAD 313
Query: 323 FLGVINYYIVYVKDNPSSLNKKLRDWNAD-SATEIFCQ---------------------- 359
++G+ Y Y+K + + ++AD T +F +
Sbjct: 314 YIGINQYTASYMKGQ-QLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMY 372
Query: 360 --------------------------NTPRRSSLKDISRVKYLHAYIGSVLDAVRNGSNI 393
N R L+D +RV + +Y+ + A+ G+N+
Sbjct: 373 GCVNYIKQKYGNPTVVITENGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGANV 432
Query: 394 RGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFLK 443
GYF WS LD FE + GY S +G+ YVD + L+R+PK SA+W+ LK
Sbjct: 433 AGYFAWSLLDNFEWLSGYTSKFGIVYVDFN--TLERHPKASAYWFRDMLK 480
>pdb|2JF6|A Chain A, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF6|B Chain B, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF7|A Chain A, Structure Of Strictosidine Glucosidase
pdb|2JF7|B Chain B, Structure Of Strictosidine Glucosidase
Length = 532
Score = 350 bits (898), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 192/479 (40%), Positives = 266/479 (55%), Gaps = 61/479 (12%)
Query: 27 KNDFPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHAGNVH----GTGDIACDGYHKY 82
+ DFP F+FGA SAYQ EGA NE R PSIWDTF G+ A + YH Y
Sbjct: 40 RRDFPQDFIFGAGGSAYQCEGAYNEGNRGPSIWDTFTQRSPAKISDGSNGNQAINCYHMY 99
Query: 83 KEDVKLMADTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNNLINELISYGIQPHVTL 140
KED+K+M TGL++YRFSISWSR++P GR VN G+++Y++ I+EL++ GI+P VTL
Sbjct: 100 KEDIKIMKQTGLESYRFSISWSRVLPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSVTL 159
Query: 141 HHFDLPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYG 200
H+DLPQALEDEYGG+++ IV DF YA+ CF +FGD++ YWTT NEP+ FA GY G
Sbjct: 160 FHWDLPQALEDEYGGFLSHRIVDDFCEYAEFCFWEFGDKIKYWTTFNEPHTFAVNGYALG 219
Query: 201 IAPPQRCSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFG 260
P R G+ + EPY+ H++LLAH + YR K+Q Q G IG+ + +
Sbjct: 220 EFAPGRGGK---GDEGDPAIEPYVVTHNILLAHKAAVEEYRNKFQKCQEGEIGIVLNSMW 276
Query: 261 LLPLTNSTEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFSDRESKQVKGS 320
+ PL++ D A +R DF++GW PL GDYPK M++ V RLP FS +S+++KG
Sbjct: 277 MEPLSDVQADIDAQKRALDFMLGWFLEPLTTGDYPKSMRELVKGRLPKFSADDSEKLKGC 336
Query: 321 ADFLGVINYYIVYVKDNPSSLNKKLRDWNADSATEIFCQNTP------------------ 362
DF+G+ Y YV + S ++KL D T+ F +N
Sbjct: 337 YDFIGMNYYTATYVTNAVKSNSEKLSYETDDQVTKTFERNQKPIGHALYGGWQHVVPWGL 396
Query: 363 ------------------RRSSLKDISRVKYL--------------HAYIGSVLDAVRNG 390
S + + ++ K L ++ SV DA+ +G
Sbjct: 397 YKLLVYTKETYHVPVLYVTESGMVEENKTKILLSEARRDAERTDYHQKHLASVRDAIDDG 456
Query: 391 SNIRGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFLKGRSLSS 449
N++GYF+WSF D FE GY YG+ +VD +RYPK SA WY F+ G+S +S
Sbjct: 457 VNVKGYFVWSFFDNFEWNLGYICRYGIIHVDYK--SFERYPKESAIWYKNFIAGKSTTS 513
>pdb|1CBG|A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase
From White Clover (Trifolium Repens L.), A Family 1
Glycosyl-Hydrolase
Length = 490
Score = 350 bits (897), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 206/479 (43%), Positives = 275/479 (57%), Gaps = 61/479 (12%)
Query: 24 EYSKNDFPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHA----GNVHGTGDIACDGY 79
+ +++ F PGF+FG ++SA+Q EGAA EDG+ PSIWDTF H GD+A D Y
Sbjct: 13 DLNRSCFAPGFVFGTASSAFQYEGAAFEDGKGPSIWDTFTHKYPEKIKDRTNGDVAIDEY 72
Query: 80 HKYKEDVKLMADTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNNLINELISYGIQPH 137
H+YKED+ +M D LDAYRFSISW R++P G+ G VN +G+ YYNNLINE+++ G+QP+
Sbjct: 73 HRYKEDIGIMKDMNLDAYRFSISWPRVLPKGKLSGGVNREGINYYNNLINEVLANGMQPY 132
Query: 138 VTLHHFDLPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGY 197
VTL H+D+PQALEDEY G++ R IV DF YA++CF++FGDRV +W T+NEP + Y
Sbjct: 133 VTLFHWDVPQALEDEYRGFLGRNIVDDFRDYAELCFKEFGDRVKHWITLNEPWGVSMNAY 192
Query: 198 DYGIAPPQRCS---SINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGV 254
YG P RCS +N C+ G+S EPY+ H+ LLAHA+ ARLY+ KYQ Q G IG+
Sbjct: 193 AYGTFAPGRCSDWLKLN-CTGGDSGREPYLAAHYQLLAHAAAARLYKTKYQASQNGIIGI 251
Query: 255 NIFAFGLLPLTNSTEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFSDRES 314
+ + P + D A +R DF++GW +PL G YP+ M+ V RLP FS ES
Sbjct: 252 TLVSHWFEPASKEKADVDAAKRGLDFMLGWFMHPLTKGRYPESMRYLVRKRLPKFSTEES 311
Query: 315 KQVKGSADFLGVINYYIVYVKDNPSSLN-------------------KKLRDWNADSATE 355
K++ GS DFLG+ Y Y P N K L A S
Sbjct: 312 KELTGSFDFLGLNYYSSYYAAKAPRIPNARPAIQTDSLINATFEHNGKPLGPMAASSWLC 371
Query: 356 IFCQ----------------------------NTPRRS---SLKDISRVKYLHAYIGSVL 384
I+ Q N P S SL D R+ Y + ++ VL
Sbjct: 372 IYPQGIRKLLLYVKNHYNNPVIYITENGRNEFNDPTLSLQESLLDTPRIDYYYRHLYYVL 431
Query: 385 DAVRNGSNIRGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFLK 443
A+ +G N++GYF WS D E GY +GL +VD + +LKR+PKLSAHW+ FLK
Sbjct: 432 TAIGDGVNVKGYFAWSLFDNMEWDSGYTVRFGLVFVDFKN-NLKRHPKLSAHWFKSFLK 489
>pdb|4A3Y|A Chain A, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
pdb|4A3Y|B Chain B, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
Length = 540
Score = 338 bits (867), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 205/494 (41%), Positives = 273/494 (55%), Gaps = 79/494 (15%)
Query: 22 AVEYSKNDFPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAH--AGNVHG--TGDIACD 77
A S++DFP F+ G +SAYQ+EG A + GR PSIWDTF H + G GD+A D
Sbjct: 14 ATRISRSDFPADFIMGTGSSAYQIEGGARDGGRGPSIWDTFTHRRPDMIRGGTNGDVAVD 73
Query: 78 GYHKYKEDVKLMADTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNNLINELISYGIQ 135
YH YKEDV ++ + GLDAYRFSISWSR++P GR G VN +G+ YYNNLI+ L++ GI+
Sbjct: 74 SYHLYKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIK 133
Query: 136 PHVTLHHFDLPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANL 195
P VTL H+D+PQALEDEYGG+++ IV DF YA++CF +FGDRV +W T+NEP F+
Sbjct: 134 PFVTLFHWDVPQALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNEPWTFSVH 193
Query: 196 GYDYGIAPP----------------QRCSSINH---CSRGNSSTEPYITVHHVLLAHASV 236
GY G+ P RCS++ CS GN TEPY HH+LLAHA+
Sbjct: 194 GYATGLYAPGRGRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAHAAA 253
Query: 237 ARLYRKKYQDKQRGYIGVNIFAFGLLPL-TNSTEDAIATQRYYDFLIGWMANPLVYGDYP 295
LY+ K+Q Q G IG++ + P NS D A R DF++GW P+ GDYP
Sbjct: 254 VELYKNKFQRGQEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITSGDYP 313
Query: 296 KIMKQNVGSRLPAFSDRESKQVKGSADFLGVINYYIVYVKD--------NPSSLNKKLR- 346
K MK+ VGSRLP FS +SK +KGS DF+G+ Y YV + N S N +
Sbjct: 314 KSMKKFVGSRLPKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTNSSGSNNFSYNTDIHV 373
Query: 347 -----------------DW--------------------------NADSATEIFCQNTPR 363
DW + ++ N
Sbjct: 374 TYETDRNGVPIGPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENGVDDVKNTNLTL 433
Query: 364 RSSLKDISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFELMDGYESSYGLYYVDRD 423
+ KD R+KYL +I +V A+ +G N++GYF WS LD FE +GY +G+ ++D +
Sbjct: 434 SEARKDSMRLKYLQDHIFNVRQAMNDGVNVKGYFAWSLLDNFEWGEGYGVRFGIIHIDYN 493
Query: 424 DPDLKRYPKLSAHW 437
D + RYPK SA W
Sbjct: 494 D-NFARYPKDSAVW 506
>pdb|4ATD|A Chain A, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATD|B Chain B, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATL|A Chain A, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
pdb|4ATL|B Chain B, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
Length = 513
Score = 338 bits (866), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 205/494 (41%), Positives = 273/494 (55%), Gaps = 79/494 (15%)
Query: 22 AVEYSKNDFPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAH--AGNVHG--TGDIACD 77
A S++DFP F+ G +SAYQ+EG A + GR PSIWDTF H + G GD+A D
Sbjct: 14 ATRISRSDFPADFIMGTGSSAYQIEGGARDGGRGPSIWDTFTHRRPDMIRGGTNGDVAVD 73
Query: 78 GYHKYKEDVKLMADTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNNLINELISYGIQ 135
YH YKEDV ++ + GLDAYRFSISWSR++P GR G VN +G+ YYNNLI+ L++ GI+
Sbjct: 74 SYHLYKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIK 133
Query: 136 PHVTLHHFDLPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANL 195
P VTL H+D+PQALEDEYGG+++ IV DF YA++CF +FGDRV +W T+NEP F+
Sbjct: 134 PFVTLFHWDVPQALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNEPWTFSVH 193
Query: 196 GYDYGIAPP----------------QRCSSINH---CSRGNSSTEPYITVHHVLLAHASV 236
GY G+ P RCS++ CS GN TEPY HH+LLAHA+
Sbjct: 194 GYATGLYAPGRGRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAHAAA 253
Query: 237 ARLYRKKYQDKQRGYIGVNIFAFGLLPL-TNSTEDAIATQRYYDFLIGWMANPLVYGDYP 295
LY+ K+Q Q G IG++ + P NS D A R DF++GW P+ GDYP
Sbjct: 254 VELYKNKFQRGQEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITSGDYP 313
Query: 296 KIMKQNVGSRLPAFSDRESKQVKGSADFLGVINYYIVYVKD--------NPSSLNKKLR- 346
K MK+ VGSRLP FS +SK +KGS DF+G+ Y YV + N S N +
Sbjct: 314 KSMKKFVGSRLPKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTNSSGSNNFSYNTDIHV 373
Query: 347 -----------------DW--------------------------NADSATEIFCQNTPR 363
DW + ++ N
Sbjct: 374 TYETDRNGVPIGPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENGVDDVKNTNLTL 433
Query: 364 RSSLKDISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFELMDGYESSYGLYYVDRD 423
+ KD R+KYL +I +V A+ +G N++GYF WS LD FE +GY +G+ ++D +
Sbjct: 434 SEARKDSMRLKYLQDHIFNVRQAMNDGVNVKGYFAWSLLDNFEWGEGYGVRFGIIHIDYN 493
Query: 424 DPDLKRYPKLSAHW 437
D + RYPK SA W
Sbjct: 494 D-NFARYPKDSAVW 506
>pdb|3U57|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U57|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|4EK7|A Chain A, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
pdb|4EK7|B Chain B, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
Length = 513
Score = 337 bits (863), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 204/494 (41%), Positives = 273/494 (55%), Gaps = 79/494 (15%)
Query: 22 AVEYSKNDFPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAH--AGNVHG--TGDIACD 77
A S++DFP F+ G +SAYQ+EG A + GR PSIWDTF H + G GD+A D
Sbjct: 14 ATRISRSDFPADFIMGTGSSAYQIEGGARDGGRGPSIWDTFTHRRPDMIRGGTNGDVAVD 73
Query: 78 GYHKYKEDVKLMADTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNNLINELISYGIQ 135
YH YKEDV ++ + GLDAYRFSISWSR++P GR G VN +G+ YYNNLI+ L++ GI+
Sbjct: 74 SYHLYKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIK 133
Query: 136 PHVTLHHFDLPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANL 195
P VTL H+D+PQALEDEYGG+++ IV DF YA++CF +FGDRV +W T+N+P F+
Sbjct: 134 PFVTLFHWDVPQALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNQPWTFSVH 193
Query: 196 GYDYGIAPP----------------QRCSSINH---CSRGNSSTEPYITVHHVLLAHASV 236
GY G+ P RCS++ CS GN TEPY HH+LLAHA+
Sbjct: 194 GYATGLYAPGRGRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAHAAA 253
Query: 237 ARLYRKKYQDKQRGYIGVNIFAFGLLPL-TNSTEDAIATQRYYDFLIGWMANPLVYGDYP 295
LY+ K+Q Q G IG++ + P NS D A R DF++GW P+ GDYP
Sbjct: 254 VELYKNKFQRGQEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITSGDYP 313
Query: 296 KIMKQNVGSRLPAFSDRESKQVKGSADFLGVINYYIVYVKD--------NPSSLNKKLR- 346
K MK+ VGSRLP FS +SK +KGS DF+G+ Y YV + N S N +
Sbjct: 314 KSMKKFVGSRLPKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTNSSGSNNFSYNTDIHV 373
Query: 347 -----------------DW--------------------------NADSATEIFCQNTPR 363
DW + ++ N
Sbjct: 374 TYETDRNGVPIGPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENGVDDVKNTNLTL 433
Query: 364 RSSLKDISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFELMDGYESSYGLYYVDRD 423
+ KD R+KYL +I +V A+ +G N++GYF WS LD FE +GY +G+ ++D +
Sbjct: 434 SEARKDSMRLKYLQDHIFNVRQAMNDGVNVKGYFAWSLLDNFEWGEGYGVRFGIIHIDYN 493
Query: 424 DPDLKRYPKLSAHW 437
D + RYPK SA W
Sbjct: 494 D-NFARYPKDSAVW 506
>pdb|1V02|E Chain E, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 327 bits (839), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 184/484 (38%), Positives = 264/484 (54%), Gaps = 65/484 (13%)
Query: 20 LTAVEYSKND-FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHAGNV----HGTGDI 74
L+ E + D FPP FLFGA+TSAYQ+EGA NEDG+ PS WD F H GD+
Sbjct: 65 LSPWEIPRRDWFPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNFPEWIVDRSNGDV 124
Query: 75 ACDGYHKYKEDVKLMADTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNNLINELISY 132
A D YH Y EDV+L+ + G+DAYRFSISW R++P G G +N K ++YYN LI+ L+
Sbjct: 125 AADSYHMYAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYNKLIDLLLEN 184
Query: 133 GIQPHVTLHHFDLPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAF 192
GI+P++T+ H+D PQAL D YGG+++ I+KD+T +A VCF +FG +V W T NEP F
Sbjct: 185 GIEPYITIFHWDTPQALVDAYGGFLDERIIKDYTDFAKVCFEKFGKKVKNWLTFNEPETF 244
Query: 193 ANLGYDYGIAPPQRCSSINHCS--RGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRG 250
++ Y G+ P RCS C+ GNS +EPYI H++L AHA +Y KY G
Sbjct: 245 CSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIY-NKYHKGADG 303
Query: 251 YIGVNIFAFGLLPLTNSTEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFS 310
IG+ + FG +P TN+ D A +R D +GW P+V GDYP M+ + R+P F
Sbjct: 304 RIGLALNVFGRVPYTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVSARDRVPYFK 363
Query: 311 DRESKQVKGSADFLGVINYY----------------IVYVKDNPSSLNKKLRDWNA---- 350
++E +++ GS D +G INYY ++ D +S K D NA
Sbjct: 364 EKEQEKLVGSYDMIG-INYYTSTFSKHIDLSPNNSPVLNTDDAYASQETKGPDGNAIGPP 422
Query: 351 ---------------------------------DSATEIFCQNTPRRSSLKDISRVKYLH 377
+ +I + P+ +L+D +R+ Y+
Sbjct: 423 TGNAWINMYPKGLHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQ 482
Query: 378 AYIGSVLDAVRNGSNIRGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSAHW 437
++ + ++ G+++RGYF WS LD FE GY +G+ YVDR++ +R K SA W
Sbjct: 483 RHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDREN-GCERTMKRSARW 541
Query: 438 YSQF 441
+F
Sbjct: 542 LQEF 545
>pdb|1V03|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 326 bits (836), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 183/484 (37%), Positives = 264/484 (54%), Gaps = 65/484 (13%)
Query: 20 LTAVEYSKND-FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHAGNV----HGTGDI 74
L+ E + D FPP FLFGA+TSAYQ+EGA NEDG+ PS WD F H GD+
Sbjct: 65 LSPWEIPRRDWFPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNFPEWIVDRSNGDV 124
Query: 75 ACDGYHKYKEDVKLMADTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNNLINELISY 132
A D YH Y EDV+L+ + G+DAYRFSISW R++P G G +N KG++YYN LI+ L+
Sbjct: 125 AADSYHMYAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKGVEYYNKLIDLLLEN 184
Query: 133 GIQPHVTLHHFDLPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAF 192
GI+P++T+ H+D PQAL + YGG+++ I+KD+T +A VCF +FG V W T N+P F
Sbjct: 185 GIEPYITIFHWDTPQALVEAYGGFLDERIIKDYTDFAKVCFEKFGKTVKNWLTFNDPETF 244
Query: 193 ANLGYDYGIAPPQRCSSINHCS--RGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRG 250
++ Y G+ P RCS C+ GNS +EPYI H++L AHA +Y KY G
Sbjct: 245 CSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIY-NKYHKGADG 303
Query: 251 YIGVNIFAFGLLPLTNSTEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFS 310
IG+ + FG +P TN+ D A +R D +GW P+V GDYP M+ + R+P F
Sbjct: 304 RIGLALNVFGRVPYTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVSARDRVPYFK 363
Query: 311 DRESKQVKGSADFLGVINYY----------------IVYVKDNPSSLNKKLRDWNA---- 350
++E +++ GS D +G INYY ++ D +S K D NA
Sbjct: 364 EKEQEKLVGSYDMIG-INYYTSTFSKHIDLSPNNSPVLNTDDAYASQETKGPDGNAIGPP 422
Query: 351 ---------------------------------DSATEIFCQNTPRRSSLKDISRVKYLH 377
+ +I + P+ +L+D +R+ Y+
Sbjct: 423 TGNAWINMYPKGLHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQ 482
Query: 378 AYIGSVLDAVRNGSNIRGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSAHW 437
++ + ++ G+++RGYF WS LD FE GY +G+ YVDR++ +R K SA W
Sbjct: 483 RHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDREN-GCERTMKRSARW 541
Query: 438 YSQF 441
+F
Sbjct: 542 LQEF 545
>pdb|1V02|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|B Chain B, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|C Chain C, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|D Chain D, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|F Chain F, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 326 bits (835), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 184/484 (38%), Positives = 263/484 (54%), Gaps = 65/484 (13%)
Query: 20 LTAVEYSKND-FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHAGNV----HGTGDI 74
L+ E + D FPP FLFGA+TSAYQ+EGA NEDG+ PS WD F H GD+
Sbjct: 65 LSPWEIPRRDWFPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNFPEWIVDRSNGDV 124
Query: 75 ACDGYHKYKEDVKLMADTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNNLINELISY 132
A D YH Y EDV+L+ + G+DAYRFSISW R++P G G +N K ++YYN LI+ L+
Sbjct: 125 AADSYHMYAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYNKLIDLLLEN 184
Query: 133 GIQPHVTLHHFDLPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAF 192
GI+P++T+ H+D PQAL D YGG+++ I+KD+T +A VCF +FG V W T NEP F
Sbjct: 185 GIEPYITIFHWDTPQALVDAYGGFLDERIIKDYTDFAKVCFEKFGKTVKNWLTFNEPETF 244
Query: 193 ANLGYDYGIAPPQRCSSINHCS--RGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRG 250
++ Y G+ P RCS C+ GNS +EPYI H++L AHA +Y KY G
Sbjct: 245 CSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIY-NKYHKGADG 303
Query: 251 YIGVNIFAFGLLPLTNSTEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFS 310
IG+ + FG +P TN+ D A +R D +GW P+V GDYP M+ + R+P F
Sbjct: 304 RIGLALNVFGRVPYTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVSARDRVPYFK 363
Query: 311 DRESKQVKGSADFLGVINYY----------------IVYVKDNPSSLNKKLRDWNA---- 350
++E +++ GS D +G INYY ++ D +S K D NA
Sbjct: 364 EKEQEKLVGSYDMIG-INYYTSTFSKHIDLSPNNSPVLNTDDAYASQETKGPDGNAIGPP 422
Query: 351 ---------------------------------DSATEIFCQNTPRRSSLKDISRVKYLH 377
+ +I + P+ +L+D +R+ Y+
Sbjct: 423 TGNAWINMYPKGLHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQ 482
Query: 378 AYIGSVLDAVRNGSNIRGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSAHW 437
++ + ++ G+++RGYF WS LD FE GY +G+ YVDR++ +R K SA W
Sbjct: 483 RHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDREN-GCERTMKRSARW 541
Query: 438 YSQF 441
+F
Sbjct: 542 LQEF 545
>pdb|3AIU|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye
pdb|3AIV|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With An Aglycone Dimboa
pdb|3AIW|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With 2-Deoxy-2- Fluoroglucoside And Dinitrophenol
Length = 564
Score = 324 bits (831), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 185/469 (39%), Positives = 252/469 (53%), Gaps = 58/469 (12%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHAGNVH---GT-GDIACDGYHKYKED 85
F FLFGASTSAYQ+EGA NEDG+ PS WD F H GT GD+A + YH Y+ED
Sbjct: 74 FSKDFLFGASTSAYQIEGAWNEDGKGPSTWDHFCHTYPERISDGTNGDVAANSYHMYEED 133
Query: 86 VKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHFDL 145
VK + D G+ YRFSISWSR++PNG G N KG+ YYNNLIN LI +GI P+VT+ H+D
Sbjct: 134 VKALKDMGMKVYRFSISWSRILPNGTGKPNQKGIDYYNNLINSLIRHGIVPYVTIWHWDT 193
Query: 146 PQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPPQ 205
PQALED+YGG++++ IV D+ +A++CF+ FGDRV W T NEP+ + Y GI P
Sbjct: 194 PQALEDKYGGFLDKQIVNDYKYFAELCFQSFGDRVKNWFTFNEPHTYCCFSYGEGIHAPG 253
Query: 206 RCSSINHCS--RGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLLP 263
RCS C+ G+S EPY HH+LLAHA L++ Y IG+ G P
Sbjct: 254 RCSPGLDCAVPEGDSLREPYTAGHHILLAHAEAVELFKAHYNKHGDSKIGMAFDVMGYEP 313
Query: 264 LTNSTEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFSDRE---------- 313
+S D A +R D+ +GW P+V GDYP M+ +G RLP F+ E
Sbjct: 314 YQDSFLDDQARERSIDYNMGWFLEPVVRGDYPFSMRSLIGDRLPMFTKEEQEKLASSCDI 373
Query: 314 ----------SKQVKGSADFLGVIN------------------------YYIVYVKDNPS 339
SK V S+D+ +N Y+I +
Sbjct: 374 MGLNYYTSRFSKHVDISSDYTPTLNTDDAYASSETTGSDGNEIGPITGTYWIYMYPKGLT 433
Query: 340 SLNKKLRDWNADSATEIF------CQNTPRRSS-LKDISRVKYLHAYIGSVLDAVRNGSN 392
L +++ + I + P L D R+ YL +I +V DA+ G++
Sbjct: 434 DLLLIMKEKYGNPPIFITENGIADVEGDPEMPDPLDDWKRLDYLQRHISAVKDAIDQGAD 493
Query: 393 IRGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQF 441
+RG+F W +D FE GY S +GL Y+D++D + KR K SA W+++F
Sbjct: 494 VRGHFTWGLIDNFEWGSGYSSRFGLVYIDKEDGN-KRKLKKSAKWFAKF 541
>pdb|2DGA|A Chain A, Crystal Structure Of Hexameric Beta-Glucosidase In Wheat
pdb|3AIQ|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With An Aglycone Dimboa
pdb|3AIR|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With 2-Deoxy- 2-Fluoroglucoside And Dinitrophenol
Length = 565
Score = 323 bits (828), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 184/469 (39%), Positives = 247/469 (52%), Gaps = 58/469 (12%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHA----GNVHGTGDIACDGYHKYKED 85
F FLFGASTSAYQ+EGA NEDG+ PS WD F H + GD+A + YH Y+ED
Sbjct: 74 FDKDFLFGASTSAYQIEGAWNEDGKGPSTWDHFCHTYPERISDMTNGDVAANSYHLYEED 133
Query: 86 VKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHFDL 145
VK + D G+ YRFSISWSR++P+G G VN G+ YYN LIN LI I P+VT+ H+D
Sbjct: 134 VKALKDMGMKVYRFSISWSRILPDGTGKVNQAGIDYYNKLINSLIDNDIVPYVTIWHWDT 193
Query: 146 PQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPPQ 205
PQALED+YGG++NR IV D+ +A+VCF+ FGDRV W T NEP+ + Y GI P
Sbjct: 194 PQALEDKYGGFLNRQIVDDYKQFAEVCFKNFGDRVKNWFTFNEPHTYCCFSYGEGIHAPG 253
Query: 206 RCSSINHCS--RGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLLP 263
RCS C+ G+S EPY HH+LLAHA +L++ +Y IG+ G P
Sbjct: 254 RCSPGMDCAVPEGDSLREPYTAGHHILLAHAEAVQLFKARYNMHGDSKIGMAFDVMGYEP 313
Query: 264 LTNSTEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFSDRE---------- 313
+S D A +R D+ +GW P+V GDYP M+ +G RLP F+ E
Sbjct: 314 YQDSFLDDQARERSIDYNMGWFLEPVVRGDYPFSMRSLIGDRLPMFTKEEQEKLASSCDI 373
Query: 314 ----------SKQVKGSADFLGVINYYIVYVKDNPSSLN-----------------KKLR 346
SK V S DF +N Y + + K L
Sbjct: 374 MGLNYYTSRFSKHVDMSPDFTPTLNTDDAYASSETTGSDGNDIGPITGTYWIYMYPKGLT 433
Query: 347 D--------------WNADSATEIFCQNTPRRSSLKDISRVKYLHAYIGSVLDAVRNGSN 392
D + ++ + L D R+ YL +I +V DA+ G++
Sbjct: 434 DLLLIMKEKYGNPPVFITENGIADVEGDESMPDPLDDWKRLDYLQRHISAVKDAIDQGAD 493
Query: 393 IRGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQF 441
+RG+F W +D FE GY S +GL Y+D++D + KR K SA W+S+F
Sbjct: 494 VRGHFTWGLIDNFEWSLGYSSRFGLVYIDKNDGN-KRKLKKSAKWFSKF 541
>pdb|3AIS|A Chain A, Crystal Structure Of A Mutant Beta-Glucosidase In Wheat
Complexed With Dimboa-Glc
Length = 565
Score = 321 bits (822), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 183/469 (39%), Positives = 246/469 (52%), Gaps = 58/469 (12%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHA----GNVHGTGDIACDGYHKYKED 85
F FLFGASTSAYQ+EGA NEDG+ PS WD F H + GD+A + YH Y+ED
Sbjct: 74 FDKDFLFGASTSAYQIEGAWNEDGKGPSTWDHFCHTYPERISDMTNGDVAANSYHLYEED 133
Query: 86 VKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHFDL 145
VK + D G+ YRFSISWSR++P+G G VN G+ YYN LIN LI I P+VT+ H+D
Sbjct: 134 VKALKDMGMKVYRFSISWSRILPDGTGKVNQAGIDYYNKLINSLIDNDIVPYVTIWHWDT 193
Query: 146 PQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPPQ 205
PQALED+YGG++NR IV D+ +A+VCF+ FGDRV W T N P+ + Y GI P
Sbjct: 194 PQALEDKYGGFLNRQIVDDYKQFAEVCFKNFGDRVKNWFTFNAPHTYCCFSYGEGIHAPG 253
Query: 206 RCSSINHCS--RGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLLP 263
RCS C+ G+S EPY HH+LLAHA +L++ +Y IG+ G P
Sbjct: 254 RCSPGMDCAVPEGDSLREPYTAGHHILLAHAEAVQLFKARYNMHGDSKIGMAFDVMGYEP 313
Query: 264 LTNSTEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFSDRE---------- 313
+S D A +R D+ +GW P+V GDYP M+ +G RLP F+ E
Sbjct: 314 YQDSFLDDQARERSIDYNMGWFLEPVVRGDYPFSMRSLIGDRLPMFTKEEQEKLASSCDI 373
Query: 314 ----------SKQVKGSADFLGVINYYIVYVKDNPSSLN-----------------KKLR 346
SK V S DF +N Y + + K L
Sbjct: 374 MGLNYYTSRFSKHVDMSPDFTPTLNTDDAYASSETTGSDGNDIGPITGTYWIYMYPKGLT 433
Query: 347 D--------------WNADSATEIFCQNTPRRSSLKDISRVKYLHAYIGSVLDAVRNGSN 392
D + ++ + L D R+ YL +I +V DA+ G++
Sbjct: 434 DLLLIMKEKYGNPPVFITENGIADVEGDESMPDPLDDWKRLDYLQRHISAVKDAIDQGAD 493
Query: 393 IRGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQF 441
+RG+F W +D FE GY S +GL Y+D++D + KR K SA W+S+F
Sbjct: 494 VRGHFTWGLIDNFEWSLGYSSRFGLVYIDKNDGN-KRKLKKSAKWFSKF 541
>pdb|2E3Z|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E3Z|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E40|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
pdb|2E40|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
Length = 465
Score = 312 bits (800), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 179/468 (38%), Positives = 260/468 (55%), Gaps = 62/468 (13%)
Query: 26 SKNDFPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHA-GNVH--GTGDIACDGYHKY 82
S P F++G +T+AYQ+EG+ ++DGR PSIWDTF A G + +GD+A D Y+++
Sbjct: 5 SAAKLPKSFVWGYATAAYQIEGSPDKDGREPSIWDTFCKAPGKIADGSSGDVATDSYNRW 64
Query: 83 KEDVKLMADTGLDAYRFSISWSRLIPNG--RGPVNPKGLQYYNNLINELISYGIQPHVTL 140
+EDV+L+ G+ AYRFS+SWSR+IP G PVN G+++Y LI EL+ GI P VTL
Sbjct: 65 REDVQLLKSYGVKAYRFSLSWSRIIPKGGRSDPVNGAGIKHYRTLIEELVKEGITPFVTL 124
Query: 141 HHFDLPQALEDEYGGWINRT-IVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDY 199
+H+DLPQAL+D YGGW+N+ ++DFT YA +CF FGD V W T NEP + +GY
Sbjct: 125 YHWDLPQALDDRYGGWLNKEEAIQDFTNYAKLCFESFGDLVQNWITFNEPWVISVMGYGN 184
Query: 200 GIAPPQRCSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAF 259
GI P S+ TEP+I HH++LAHA +LYR ++++KQ G IG+ + +
Sbjct: 185 GIFAPGHVSN----------TEPWIVSHHIILAHAHAVKLYRDEFKEKQGGQIGITLDSH 234
Query: 260 GLLPLTNSTEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFSDRESKQVKG 319
L+P ++ AT R +F +G ANP+ G+YP +K+ +G RLP F+ E + VKG
Sbjct: 235 WLIPYDDTDASKEATLRAMEFKLGRFANPIYKGEYPPRIKKILGDRLPEFTPEEIELVKG 294
Query: 320 SADFLGVINYYIVYVKDNPS-SLNKKLRD------------------------------- 347
S+DF G+ Y V+D S L ++
Sbjct: 295 SSDFFGLNTYTTHLVQDGGSDELAGFVKTGHTRADGTQLGTQSDMGWLQTYGPGFRWLLN 354
Query: 348 --WNADSATEIFCQN---------TPRRSSLKDISRVKYLHAYIGSVLDAV-RNGSNIRG 395
W A +N P ++ D R Y Y ++L AV +G+++RG
Sbjct: 355 YLWKAYDKPVYVTENGFPVKGENDLPVEQAVDDTDRQAYYRDYTEALLQAVTEDGADVRG 414
Query: 396 YFMWSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFLK 443
YF WS LD FE +GY+ +G+ +VD + KR PK SA + S++ K
Sbjct: 415 YFGWSLLDNFEWAEGYKVRFGVTHVDYETQ--KRTPKKSAEFLSRWFK 460
>pdb|1E1E|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1E|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1F|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
pdb|1E1F|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
Length = 512
Score = 304 bits (779), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 183/493 (37%), Positives = 257/493 (52%), Gaps = 70/493 (14%)
Query: 16 ATSALTAVEYSKND-FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHAGNVH----G 70
L+ E + D FP F FGA+TSAYQ+EGA NEDG+ S WD F H
Sbjct: 9 GVQMLSPSEIPQRDWFPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHPERILDGS 68
Query: 71 TGDIACDGYHKYKEDVKLMADTGLDAYRFSISWSRLIPNG--RGPVNPKGLQYYNNLINE 128
DI + YH YK DV+L+ + G+DAYRFSISW R++P G G +NP G++YY NLIN
Sbjct: 69 NSDIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINL 128
Query: 129 LISYGIQPHVTLHHFDLPQALEDEYGGWINRT---IVKDFTAYADVCFRQFGDRVSYWTT 185
L+ GI+P+VT+ H+D+PQALE++YGG+++++ IV+D+T +A VCF FGD+V W T
Sbjct: 129 LLENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLT 188
Query: 186 VNEPNAFANLGYDYGIAPPQRCSSINHCS--RGNSSTEPYITVHHVLLAHASVARLYRKK 243
NEP F + Y G+ P RCS C+ GNS EPY H++LLAHA LY K
Sbjct: 189 FNEPQTFTSFSYGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKH 248
Query: 244 YQ-DKQRGYIGVNIFAFGLLPLTNSTEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNV 302
Y+ D R IG+ G +P S D A +R +D +GW P+V GDYP M+
Sbjct: 249 YKRDDTR--IGLAFDVMGRVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLA 306
Query: 303 GSRLPAFSD--------------------RESKQVKGSADFLGVINYYIVYVKDNPSSLN 342
RLP F D R SK + S ++ V+N Y + +
Sbjct: 307 RERLPFFKDEQKEKLAGSYNMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYASQEVNGPD 366
Query: 343 KK-----------------LRDW---------------NADSATEIFCQNTP--RRSSLK 368
K L+D + ++ + TP ++L
Sbjct: 367 GKPIGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALN 426
Query: 369 DISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLK 428
D R+ Y+ +I ++ +++ GSN++GYF WS LD FE G+ YG+ YVDR++ +
Sbjct: 427 DYKRLDYIQRHIATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN-NCT 485
Query: 429 RYPKLSAHWYSQF 441
RY K SA W +F
Sbjct: 486 RYMKESAKWLKEF 498
>pdb|1HXJ|A Chain A, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
pdb|1HXJ|B Chain B, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
Length = 507
Score = 304 bits (778), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 183/493 (37%), Positives = 257/493 (52%), Gaps = 70/493 (14%)
Query: 16 ATSALTAVEYSKND-FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHAGNVH----G 70
L+ E + D FP F FGA+TSAYQ+EGA NEDG+ S WD F H
Sbjct: 4 GVQMLSPSEIPQRDWFPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHPERILDGS 63
Query: 71 TGDIACDGYHKYKEDVKLMADTGLDAYRFSISWSRLIPNG--RGPVNPKGLQYYNNLINE 128
DI + YH YK DV+L+ + G+DAYRFSISW R++P G G +NP G++YY NLIN
Sbjct: 64 NSDIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINL 123
Query: 129 LISYGIQPHVTLHHFDLPQALEDEYGGWINRT---IVKDFTAYADVCFRQFGDRVSYWTT 185
L+ GI+P+VT+ H+D+PQALE++YGG+++++ IV+D+T +A VCF FGD+V W T
Sbjct: 124 LLENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLT 183
Query: 186 VNEPNAFANLGYDYGIAPPQRCSSINHCS--RGNSSTEPYITVHHVLLAHASVARLYRKK 243
NEP F + Y G+ P RCS C+ GNS EPY H++LLAHA LY K
Sbjct: 184 FNEPQTFTSFSYGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKH 243
Query: 244 YQ-DKQRGYIGVNIFAFGLLPLTNSTEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNV 302
Y+ D R IG+ G +P S D A +R +D +GW P+V GDYP M+
Sbjct: 244 YKRDDTR--IGLAFDVMGRVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLA 301
Query: 303 GSRLPAFSD--------------------RESKQVKGSADFLGVINYYIVYVKDNPSSLN 342
RLP F D R SK + S ++ V+N Y + +
Sbjct: 302 RERLPFFKDEQKEKLAGSYNMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYASQEVNGPD 361
Query: 343 KK-----------------LRDW---------------NADSATEIFCQNTP--RRSSLK 368
K L+D + ++ + TP ++L
Sbjct: 362 GKPIGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALN 421
Query: 369 DISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLK 428
D R+ Y+ +I ++ +++ GSN++GYF WS LD FE G+ YG+ YVDR++ +
Sbjct: 422 DYKRLDYIQRHIATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN-NCT 480
Query: 429 RYPKLSAHWYSQF 441
RY K SA W +F
Sbjct: 481 RYMKESAKWLKEF 493
>pdb|1H49|A Chain A, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
pdb|1H49|B Chain B, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
Length = 512
Score = 303 bits (775), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 182/493 (36%), Positives = 258/493 (52%), Gaps = 70/493 (14%)
Query: 16 ATSALTAVEYSKND-FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHAGNVH----G 70
L+ E + D FP F FGA+TSAYQ+EGA NEDG+ S WD F H
Sbjct: 9 GVQMLSPSEIPQRDWFPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHPERILDGS 68
Query: 71 TGDIACDGYHKYKEDVKLMADTGLDAYRFSISWSRLIPNG--RGPVNPKGLQYYNNLINE 128
DI + YH YK DV+L+ + G+DAYRFSISW R++P G G +NP G++YY NLIN
Sbjct: 69 NSDIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINL 128
Query: 129 LISYGIQPHVTLHHFDLPQALEDEYGGWINRT---IVKDFTAYADVCFRQFGDRVSYWTT 185
L+ GI+P+VT+ H+D+PQALE++YGG+++++ IV+D+T +A VCF FGD+V W T
Sbjct: 129 LLENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLT 188
Query: 186 VNEPNAFANLGYDYGIAPPQRCSSINHCS--RGNSSTEPYITVHHVLLAHASVARLYRKK 243
N+P F ++ Y G+ P RCS C+ GNS EPY H++LLAHA LY K
Sbjct: 189 FNDPQTFTSVSYGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKH 248
Query: 244 YQ-DKQRGYIGVNIFAFGLLPLTNSTEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNV 302
Y+ D R IG+ G +P S D A +R +D +GW P+V GDYP M+
Sbjct: 249 YKRDDTR--IGLAFDVMGRVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLA 306
Query: 303 GSRLPAFSD--------------------RESKQVKGSADFLGVINYYIVYVKDNPSSLN 342
RLP F D R SK + S ++ V+N Y + +
Sbjct: 307 RERLPFFKDEQKEKLAGSYNMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYASQEVNGPD 366
Query: 343 KK-----------------LRDW---------------NADSATEIFCQNTP--RRSSLK 368
K L+D + ++ + TP ++L
Sbjct: 367 GKPIGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALN 426
Query: 369 DISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLK 428
D R+ Y+ +I ++ +++ GSN++GYF WS LD FE G+ YG+ YVDR++ +
Sbjct: 427 DYKRLDYIQRHIATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN-NCT 485
Query: 429 RYPKLSAHWYSQF 441
RY K SA W +F
Sbjct: 486 RYMKESAKWLKEF 498
>pdb|1E4L|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4L|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4N|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E4N|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E55|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E55|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E56|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1E56|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1V08|A Chain A, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
pdb|1V08|B Chain B, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
Length = 512
Score = 302 bits (774), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 182/493 (36%), Positives = 257/493 (52%), Gaps = 70/493 (14%)
Query: 16 ATSALTAVEYSKND-FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHAGNVH----G 70
L+ E + D FP F FGA+TSAYQ+EGA NEDG+ S WD F H
Sbjct: 9 GVQMLSPSEIPQRDWFPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHPERILDGS 68
Query: 71 TGDIACDGYHKYKEDVKLMADTGLDAYRFSISWSRLIPNG--RGPVNPKGLQYYNNLINE 128
DI + YH YK DV+L+ + G+DAYRFSISW R++P G G +NP G++YY NLIN
Sbjct: 69 NSDIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINL 128
Query: 129 LISYGIQPHVTLHHFDLPQALEDEYGGWINRT---IVKDFTAYADVCFRQFGDRVSYWTT 185
L+ GI+P+VT+ H+D+PQALE++YGG+++++ IV+D+T +A VCF FGD+V W T
Sbjct: 129 LLENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLT 188
Query: 186 VNEPNAFANLGYDYGIAPPQRCSSINHCS--RGNSSTEPYITVHHVLLAHASVARLYRKK 243
N+P F + Y G+ P RCS C+ GNS EPY H++LLAHA LY K
Sbjct: 189 FNDPQTFTSFSYGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKH 248
Query: 244 YQ-DKQRGYIGVNIFAFGLLPLTNSTEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNV 302
Y+ D R IG+ G +P S D A +R +D +GW P+V GDYP M+
Sbjct: 249 YKRDDTR--IGLAFDVMGRVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLA 306
Query: 303 GSRLPAFSD--------------------RESKQVKGSADFLGVINYYIVYVKDNPSSLN 342
RLP F D R SK + S ++ V+N Y + +
Sbjct: 307 RERLPFFKDEQKEKLAGSYNMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYASQEVNGPD 366
Query: 343 KK-----------------LRDW---------------NADSATEIFCQNTP--RRSSLK 368
K L+D + ++ + TP ++L
Sbjct: 367 GKPIGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALN 426
Query: 369 DISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLK 428
D R+ Y+ +I ++ +++ GSN++GYF WS LD FE G+ YG+ YVDR++ +
Sbjct: 427 DYKRLDYIQRHIATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN-NCT 485
Query: 429 RYPKLSAHWYSQF 441
RY K SA W +F
Sbjct: 486 RYMKESAKWLKEF 498
>pdb|1E6Q|M Chain M, Myrosinase From Sinapis Alba With The Bound Transition
State Analogue Gluco-Tetrazole
pdb|1E6X|M Chain M, Myrosinase From Sinapis Alba With A Bound Transition State
Analogue,D-Glucono-1,5-Lactone
pdb|1E70|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba
pdb|1E71|M Chain M, Myrosinase From Sinapis Alba With Bound Ascorbate
pdb|1E72|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate Or Ascorbate
pdb|1E73|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba With Bound
L-Ascorbate
pdb|1E6S|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate
pdb|1E4M|M Chain M, Myrosinase From Sinapis Alba
pdb|1W9B|M Chain M, S. Alba Myrosinase In Complex With Carba-Glucotropaeolin
pdb|1W9D|M Chain M, S. Alba Myrosinase In Complex With S-Ethyl
Phenylacetothiohydroximate-O-Sulfate
pdb|2WXD|M Chain M, A Micromolar O-Sulfated Thiohydroximate Inhibitor Bound To
Plant Myrosinase
Length = 501
Score = 285 bits (728), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 175/476 (36%), Positives = 242/476 (50%), Gaps = 78/476 (16%)
Query: 37 GASTSAYQVEGAANEDGRTPSIWDTFAH-----AGNVHGTGDIACDGYHKYKEDVKLMAD 91
G ++SAYQ+EG GR +IWD F H +G HG GD CD + +++D+ ++ +
Sbjct: 32 GVASSAYQIEGTI---GRGLNIWDGFTHRYPNKSGPDHGNGDTTCDSFSYWQKDIDVLDE 88
Query: 92 TGLDAYRFSISWSRLIPNGRGP--VNPKGLQYYNNLINELISYGIQPHVTLHHFDLPQAL 149
YRFSI+WSR+IP G+ VN KG+ YY+ LI+ LI GI P VTL H+DLPQ L
Sbjct: 89 LNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQTL 148
Query: 150 EDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPPQRCSS 209
+DEY G+++ I+ DF YAD+CF +FGD V YW T+N+ + GY + P RCS
Sbjct: 149 QDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALDAPGRCSP 208
Query: 210 I--NHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLLPLTNS 267
C GNSSTEPYI HH LLAHA V LYRK Y Q G IG + LP ++
Sbjct: 209 TVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNYT-HQGGKIGPTMITRWFLPYNDT 267
Query: 268 TEDAIA-TQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFSDRESKQVKGSADFLGV 326
+IA T+R +F +GW PL G YP+IM VG RLP+FS ES VKGS DFLG+
Sbjct: 268 DRHSIAATERMKEFFLGWFMGPLTNGTYPQIMIDTVGERLPSFSPEESNLVKGSYDFLGL 327
Query: 327 INYY-------------------------IVYVKDNPSSLNKKLRDWNADSATEIF---- 357
Y+ + Y+ + + ADS I+
Sbjct: 328 NYYFTQYAQPSPNPVNSTNHTAMMDAGAKLTYINASGHYIGPLFEKDKADSTDNIYYYPK 387
Query: 358 --------------------CQN---TP----RRSSLKDISRVKYLHAYIGSVLDAVRNG 390
+N TP R S+ D +R+ YL +++ + ++
Sbjct: 388 GIYSVMDYFKNKYYNPLIYVTENGISTPGDENRNQSMLDYTRIDYLCSHLCFLNKVIKEK 447
Query: 391 S-NIRGYFMWSFLDVFELMDGYESSYGLYYVDRD---DPDLKRYPKLSAHWYSQFL 442
N++GY W+ D +E G+ +GL Y+D + D DLK+ S WY F+
Sbjct: 448 DVNVKGYLAWALGDNYEFNKGFTVRFGLSYIDWNNVTDRDLKK----SGQWYQSFI 499
>pdb|1DWA|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 1:
Structure Prior To Irradiation
pdb|1DWF|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 2:
Structure After Irradiation With 9.110e15 PhotonsMM2
pdb|1DWG|M Chain M, Study On Radiation Damage On A Cryocooled Crystal: Part 3
Structure After Irradiation With 18.210e15 PhotonsMM2.
pdb|1DWH|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 4:
Structure After Irradiation With 27.210e15 PhotonsMM2
pdb|1DWI|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 5:
Structure After Irradiation With 54.010e15 PhotonsMM2
pdb|1DWJ|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Refined
Part 6: Structure After A Radiation Dose Of 5410e15
PhotonsMM2
Length = 499
Score = 284 bits (727), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 175/476 (36%), Positives = 242/476 (50%), Gaps = 78/476 (16%)
Query: 37 GASTSAYQVEGAANEDGRTPSIWDTFAH-----AGNVHGTGDIACDGYHKYKEDVKLMAD 91
G ++SAYQ+EG GR +IWD F H +G HG GD CD + +++D+ ++ +
Sbjct: 30 GVASSAYQIEGTI---GRGLNIWDGFTHRYPNKSGPDHGNGDTTCDSFSYWQKDIDVLDE 86
Query: 92 TGLDAYRFSISWSRLIPNGRGP--VNPKGLQYYNNLINELISYGIQPHVTLHHFDLPQAL 149
YRFSI+WSR+IP G+ VN KG+ YY+ LI+ LI GI P VTL H+DLPQ L
Sbjct: 87 LNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQTL 146
Query: 150 EDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPPQRCSS 209
+DEY G+++ I+ DF YAD+CF +FGD V YW T+N+ + GY + P RCS
Sbjct: 147 QDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALDAPGRCSP 206
Query: 210 I--NHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLLPLTNS 267
C GNSSTEPYI HH LLAHA V LYRK Y Q G IG + LP ++
Sbjct: 207 TVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNYT-HQGGKIGPTMITRWFLPYNDT 265
Query: 268 TEDAIA-TQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFSDRESKQVKGSADFLGV 326
+IA T+R +F +GW PL G YP+IM VG RLP+FS ES VKGS DFLG+
Sbjct: 266 DRHSIAATERMKEFFLGWFMGPLTNGTYPQIMIDTVGERLPSFSPEESNLVKGSYDFLGL 325
Query: 327 INYY-------------------------IVYVKDNPSSLNKKLRDWNADSATEIF---- 357
Y+ + Y+ + + ADS I+
Sbjct: 326 NYYFTQYAQPSPNPVNSTNHTAMMDAGAKLTYINASGHYIGPLFEKDKADSTDNIYYYPK 385
Query: 358 --------------------CQN---TP----RRSSLKDISRVKYLHAYIGSVLDAVRNG 390
+N TP R S+ D +R+ YL +++ + ++
Sbjct: 386 GIYSVMDYFKNKYYNPLIYVTENGISTPGDENRNQSMLDYTRIDYLCSHLCFLNKVIKEK 445
Query: 391 S-NIRGYFMWSFLDVFELMDGYESSYGLYYVDRD---DPDLKRYPKLSAHWYSQFL 442
N++GY W+ D +E G+ +GL Y+D + D DLK+ S WY F+
Sbjct: 446 DVNVKGYLAWALGDNYEFNKGFTVRFGLSYIDWNNVTDRDLKK----SGQWYQTFI 497
>pdb|2JFE|X Chain X, The Crystal Structure Of Human Cytosolic Beta-Glucosidase
Length = 469
Score = 284 bits (726), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 171/477 (35%), Positives = 249/477 (52%), Gaps = 69/477 (14%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHAGN----VHGTGDIACDGYHKYKED 85
FP GF + A+T+AYQVEG + DG+ P +WDTF H G + TGD+AC Y ++ED
Sbjct: 3 FPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEED 62
Query: 86 VKLMADTGLDAYRFSISWSRLIPNGR-GPVNPKGLQYYNNLINELISYGIQPHVTLHHFD 144
+K + GL YRFS+SWSRL+P+G G +N KG+ YYN +I++L+ G+ P VTL+HFD
Sbjct: 63 LKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFD 122
Query: 145 LPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPP 204
LPQ LED+ GGW++ I++ F YA CF FGDRV W T+NE N + + YD G+ PP
Sbjct: 123 LPQTLEDQ-GGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINEANVLSVMSYDLGMFPP 181
Query: 205 QRCSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLLPL 264
I H G Y H+++ AHA Y ++ KQ+G + +++FA L P
Sbjct: 182 ----GIPHFGTGG-----YQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPA 232
Query: 265 -TNSTEDAIATQRYYDFLIGWMANPL-VYGDYPKIMKQNVG----------SRLPAFSDR 312
NS D A +R F + A P+ + GDYP+++K + SRLP F++
Sbjct: 233 DPNSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTEE 292
Query: 313 ESKQVKGSADFLGVINYYIVYVK--------------------DNPSSLN---------- 342
E K +KG+ADF V Y +K +PS +N
Sbjct: 293 EKKMIKGTADFFAVQYYTTRLIKYQENKKGELGILQDAEIEFFPDPSWINVDWIYVVPWG 352
Query: 343 -----KKLRDWNADSATEI----FCQNTPRRSSLKDISRVKYLHAYIGSVLDAVR-NGSN 392
K ++D + I F Q+ P + L D R +Y + A++ + N
Sbjct: 353 VCKLLKYIKDTYNNPVIYITENGFPQSDP--APLDDTQRWEYFRQTFQELFKAIQLDKVN 410
Query: 393 IRGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFLKGRSLSS 449
++ Y WS LD FE GY S +GL++VD +DP R P SA Y++ ++ L +
Sbjct: 411 LQVYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSAKEYAKIIRNNGLEA 467
>pdb|2E9L|A Chain A, Crystal Structure Of Human Cytosolic Neutral
Beta-Glycosylceramidase (Klotho-Related Prote:klrp)
Complex With Glucose And Fatty Acids
pdb|2E9M|A Chain A, Crystal Structure Of Human Cytosolic Neutral Beta-
Glycosylceramidase (Klotho-Related Prote:klrp) Complex
With Galactose And Fatty Acids
Length = 469
Score = 283 bits (723), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 171/477 (35%), Positives = 248/477 (51%), Gaps = 69/477 (14%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHAGN----VHGTGDIACDGYHKYKED 85
FP GF + A+T+AYQVEG + DG+ P +WDTF H G + TGD+AC Y ++ED
Sbjct: 3 FPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEED 62
Query: 86 VKLMADTGLDAYRFSISWSRLIPNGR-GPVNPKGLQYYNNLINELISYGIQPHVTLHHFD 144
+K + GL YRFS+SWSRL+P+G G +N KG+ YYN +I++L+ G+ P VTL+HFD
Sbjct: 63 LKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFD 122
Query: 145 LPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPP 204
LPQ LED+ GGW++ I++ F YA CF FGDRV W T+NE N + + YD G+ PP
Sbjct: 123 LPQTLEDQ-GGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINEANVLSVMSYDLGMFPP 181
Query: 205 QRCSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLLPL 264
I H G Y H+++ AHA Y ++ KQ+G + +++FA L P
Sbjct: 182 ----GIPHFGTGG-----YQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPA 232
Query: 265 -TNSTEDAIATQRYYDFLIGWMANPL-VYGDYPKIMKQNVG----------SRLPAFSDR 312
NS D A +R F + A P+ + GDYP+++K + SRLP F++
Sbjct: 233 DPNSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTEE 292
Query: 313 ESKQVKGSADFLGVINYYIVYVK--------------------DNPS------------- 339
E K +KG+ADF V Y +K +PS
Sbjct: 293 EKKMIKGTADFFAVQYYTTRLIKYQENKKGELGILQDAEIEFFPDPSWKNVDWIYVVPWG 352
Query: 340 --SLNKKLRDWNADSATEI----FCQNTPRRSSLKDISRVKYLHAYIGSVLDAVR-NGSN 392
L K ++D + I F Q+ P + L D R +Y + A++ + N
Sbjct: 353 VCKLLKYIKDTYNNPVIYITENGFPQSDP--APLDDTQRWEYFRQTFQELFKAIQLDKVN 410
Query: 393 IRGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFLKGRSLSS 449
++ Y WS LD FE GY S +GL++VD +DP R P SA Y++ ++ L +
Sbjct: 411 LQVYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSAKEYAKIIRNNGLEA 467
>pdb|2ZOX|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase
pdb|3VKK|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase-Mannose Complex
Length = 469
Score = 281 bits (719), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 170/477 (35%), Positives = 248/477 (51%), Gaps = 69/477 (14%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHAGN----VHGTGDIACDGYHKYKED 85
FP GF + A+T+AYQVEG + DG+ P +WDTF H G + TGD+AC Y ++ED
Sbjct: 3 FPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEED 62
Query: 86 VKLMADTGLDAYRFSISWSRLIPNGR-GPVNPKGLQYYNNLINELISYGIQPHVTLHHFD 144
+K + GL YRFS+SWSRL+P+G G +N KG+ YYN +I++L+ G+ P VTL+HFD
Sbjct: 63 LKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFD 122
Query: 145 LPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPP 204
LPQ LED+ GGW++ I++ F YA CF FGDRV W T+N+ N + + YD G+ PP
Sbjct: 123 LPQTLEDQ-GGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINQANVLSVMSYDLGMFPP 181
Query: 205 QRCSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLLPL 264
I H G Y H+++ AHA Y ++ KQ+G + +++FA L P
Sbjct: 182 ----GIPHFGTGG-----YQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPA 232
Query: 265 -TNSTEDAIATQRYYDFLIGWMANPL-VYGDYPKIMKQNVG----------SRLPAFSDR 312
NS D A +R F + A P+ + GDYP+++K + SRLP F++
Sbjct: 233 DPNSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTEE 292
Query: 313 ESKQVKGSADFLGVINYYIVYVK--------------------DNPS------------- 339
E K +KG+ADF V Y +K +PS
Sbjct: 293 EKKMIKGTADFFAVQYYTTRLIKYQENKKGELGILQDAEIEFFPDPSWKNVDWIYVVPWG 352
Query: 340 --SLNKKLRDWNADSATEI----FCQNTPRRSSLKDISRVKYLHAYIGSVLDAVR-NGSN 392
L K ++D + I F Q+ P + L D R +Y + A++ + N
Sbjct: 353 VCKLLKYIKDTYNNPVIYITENGFPQSDP--APLDDTQRWEYFRQTFQELFKAIQLDKVN 410
Query: 393 IRGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFLKGRSLSS 449
++ Y WS LD FE GY S +GL++VD +DP R P SA Y++ ++ L +
Sbjct: 411 LQVYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSAKEYAKIIRNNGLEA 467
>pdb|1MYR|A Chain A, Myrosinase From Sinapis Alba
Length = 501
Score = 279 bits (713), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 147/323 (45%), Positives = 194/323 (60%), Gaps = 14/323 (4%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAH-----AGNVHGTGDIACDGYHKYKE 84
F F+FG ++SAYQ+EG GR +IWD F H +G HG GD CD + +++
Sbjct: 25 FEADFIFGVASSAYQIEGTI---GRGLNIWDGFTHRYPDKSGPDHGNGDTTCDSFSYWQK 81
Query: 85 DVKLMADTGLDAYRFSISWSRLIPNGRGP--VNPKGLQYYNNLINELISYGIQPHVTLHH 142
D+ ++ + YRFSI+WSR+IP G+ VN KG+ YY+ LI+ LI GI P VTL H
Sbjct: 82 DIDVLDELNATGYRFSIAWSRIIPRGKRSRGVNQKGIDYYHGLIDGLIKKGITPFVTLFH 141
Query: 143 FDLPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIA 202
+DLPQ L+DEY G+++ I+ DF YAD+CF +FGD V YW T+N+ + GY +
Sbjct: 142 WDLPQTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALD 201
Query: 203 PPQRCSSI--NHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFG 260
P RCS C GNSSTEPYI HH LLAHA V LYRK Y Q G IG +
Sbjct: 202 APGRCSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNYT-HQGGKIGPTMITRW 260
Query: 261 LLPLTNSTEDAI-ATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFSDRESKQVKG 319
LP ++ +I AT+R F +GW PL G YP+IM VG+RLP FS E+ VKG
Sbjct: 261 FLPYNDTDRHSIAATERMKQFFLGWFMGPLTNGTYPQIMIDTVGARLPTFSPEETNLVKG 320
Query: 320 SADFLGVINYYIVYVKDNPSSLN 342
S DFLG+ Y+ Y + +P+ +N
Sbjct: 321 SYDFLGLNYYFTQYAQPSPNPVN 343
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Query: 363 RRSSLKDISRVKYLHAYIGSVLDAVRNGS-NIRGYFMWSFLDVFELMDGYESSYGLYYVD 421
R+ S+ D +R+ YL +++ + ++ N++GY W+ D +E +G+ +GL Y++
Sbjct: 420 RKESMLDYTRIDYLCSHLCFLNKVIKEKDVNVKGYLAWALGDNYEFNNGFTVRFGLSYIN 479
Query: 422 RD---DPDLKRYPKLSAHWYSQFL 442
+ D DLK+ S WY +F+
Sbjct: 480 WNNVTDRDLKK----SGQWYQKFI 499
>pdb|3AHZ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Tris
pdb|3VIF|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Gluconolactone
pdb|3VIG|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With 1-Deoxynojirimycin
pdb|3VIH|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glycerol
pdb|3VII|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Bis-Tris
Length = 487
Score = 278 bits (712), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 177/476 (37%), Positives = 252/476 (52%), Gaps = 72/476 (15%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHAGNVH----GTGDIACDGYHKYKED 85
FP F GA+T++YQ+EGA +E+G+ P+IWDT H + TGDIA D YH YKED
Sbjct: 12 FPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKED 71
Query: 86 VKLMADTGLDAYRFSISWSRLIPNGR-GPVNPKGLQYYNNLINELISYGIQPHVTLHHFD 144
VK++ + G YRFSISW+R++P G VN G+ YYNNLINEL++ GI+P VT++H+D
Sbjct: 72 VKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWD 131
Query: 145 LPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGY--DYGIA 202
LPQAL+D GGW N + K YA V F+ FGDRV W T NEP F + GY + G+A
Sbjct: 132 LPQALQD-LGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNEPLTFMD-GYASEIGMA 189
Query: 203 PPQRCSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLL 262
P SIN G+ Y+ H V+ AHA + LY ++++ +Q G +G+++
Sbjct: 190 P-----SINTPGIGD-----YLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCE 239
Query: 263 PLTNSTEDAIATQRYYDFLIGWMANPLVY--GDYPKIMKQNVG----------SRLPAFS 310
P TNS ED + + Y F +G A+P+ GDYP ++K V SRLP F+
Sbjct: 240 PATNSAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFT 299
Query: 311 DRESKQVKGSADFLGVINYYIV----------------------------------YVKD 336
E + ++G+ DFLG IN+Y ++K
Sbjct: 300 AEEVEYIRGTHDFLG-INFYTALLGKSGVEGYEPSRYRDSGVILTQDAAWPISASSWLKV 358
Query: 337 NPSSLNKKLRDW--NADSATEIFCQNT--PRRSSLKDISRVKYLHAYIGSVLDAV-RNGS 391
P K+L +W N + +F L D RV Y ++ +L A+ +G
Sbjct: 359 VPWGFRKEL-NWIKNEYNNPPVFITENGFSDYGGLNDTGRVHYYTEHLKEMLKAIHEDGV 417
Query: 392 NIRGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFLKGRSL 447
N+ GY WS +D FE + GY +G+Y VD +DP R PK SA ++ + R +
Sbjct: 418 NVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESAKVLAEIMNTRKI 473
>pdb|4GXP|A Chain A, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|B Chain B, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|C Chain C, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
Length = 467
Score = 278 bits (711), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 169/470 (35%), Positives = 244/470 (51%), Gaps = 67/470 (14%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHA-GNVHG--TGDIACDGYHKYKEDV 86
FP GFL+G +T++YQ+EG+ DG SIW TF+H GNV TGD+ACD Y+++KED+
Sbjct: 13 FPEGFLWGVATASYQIEGSPLADGAGMSIWHTFSHTPGNVKNGDTGDVACDHYNRWKEDI 72
Query: 87 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHFDLP 146
+++ G+ AYRFSISW R++P G G VN KGL +YN +I+ L+ GI P VT+ H+DLP
Sbjct: 73 EIIEKLGVKAYRFSISWPRILPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTIFHWDLP 132
Query: 147 QALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPPQR 206
AL+ + GG +NR I F Y+ V F FGDRV W T NEP A GY G P R
Sbjct: 133 FALQLK-GGLLNREIADWFAEYSRVLFENFGDRVKNWITFNEPLCSAIPGYGSGTFAPGR 191
Query: 207 CSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLLPLTN 266
S++EP+ H++L+AH +++R+ +D G IG+ + P
Sbjct: 192 ----------QSTSEPWTVGHNILVAHGRAVKVFRETVKD---GKIGIVLNGDFTYPWDA 238
Query: 267 S-TEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFSDRESKQVKGSADFLG 325
+ D A +R +F W A+P+ GDYP M++ +G RLP F+ E V GS DF G
Sbjct: 239 ADPADKEAAERRLEFFTAWFADPIYLGDYPASMRKQLGDRLPTFTPEERALVHGSNDFYG 298
Query: 326 VINYYIVYV--KDNPSSLNKKL---------RDWNADSATEIFCQNTPRRSSLKDI---- 370
+ +Y Y+ + +P+S + + + N P + +D
Sbjct: 299 MNHYTSNYIRHRSSPASADDTVGNVDVLFTNKQGNCIGPETAMPWLRPCAAGFRDFLVWI 358
Query: 371 -------------------------------SRVKYLHAYIGSVLDAVR-NGSNIRGYFM 398
+R+ YL AYIG+++ AV +G N++GYF+
Sbjct: 359 SKRYGYPPIYVTENGAAFDDVVSEDGRVHDQNRIDYLKAYIGAMVTAVELDGVNVKGYFV 418
Query: 399 WSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFLKGRSLS 448
WS LD FE +GY +G+ YVD KR K S +WYS +K L
Sbjct: 419 WSLLDNFEWAEGYSKRFGIVYVDYSTQ--KRIVKDSGYWYSNVVKNNGLE 466
>pdb|3AI0|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With
Para-Nitrophenyl-Beta-D-Glucopyranoside
pdb|3VIM|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIN|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIO|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIP|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
Length = 487
Score = 277 bits (708), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 176/476 (36%), Positives = 252/476 (52%), Gaps = 72/476 (15%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHAGNVH----GTGDIACDGYHKYKED 85
FP F GA+T++YQ+EGA +E+G+ P+IWDT H + TGDIA D YH YKED
Sbjct: 12 FPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKED 71
Query: 86 VKLMADTGLDAYRFSISWSRLIPNGR-GPVNPKGLQYYNNLINELISYGIQPHVTLHHFD 144
VK++ + G YRFSISW+R++P G VN G+ YYNNLINEL++ GI+P VT++H+D
Sbjct: 72 VKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWD 131
Query: 145 LPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGY--DYGIA 202
LPQAL+D GGW N + K YA V F+ FGDRV W T N+P F + GY + G+A
Sbjct: 132 LPQALQD-LGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNDPLTFMD-GYASEIGMA 189
Query: 203 PPQRCSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLL 262
P SIN G+ Y+ H V+ AHA + LY ++++ +Q G +G+++
Sbjct: 190 P-----SINTPGIGD-----YLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCE 239
Query: 263 PLTNSTEDAIATQRYYDFLIGWMANPLVY--GDYPKIMKQNVG----------SRLPAFS 310
P TNS ED + + Y F +G A+P+ GDYP ++K V SRLP F+
Sbjct: 240 PATNSAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFT 299
Query: 311 DRESKQVKGSADFLGVINYYIV----------------------------------YVKD 336
E + ++G+ DFLG IN+Y ++K
Sbjct: 300 AEEVEYIRGTHDFLG-INFYTALLGKSGVEGYEPSRYRDSGVILTQDAAWPISASSWLKV 358
Query: 337 NPSSLNKKLRDW--NADSATEIFCQNT--PRRSSLKDISRVKYLHAYIGSVLDAV-RNGS 391
P K+L +W N + +F L D RV Y ++ +L A+ +G
Sbjct: 359 VPWGFRKEL-NWIKNEYNNPPVFITENGFSDYGGLNDTGRVHYYTEHLKEMLKAIHEDGV 417
Query: 392 NIRGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFLKGRSL 447
N+ GY WS +D FE + GY +G+Y VD +DP R PK SA ++ + R +
Sbjct: 418 NVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESAKVLAEIMNTRKI 473
>pdb|3VIJ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glucose
Length = 487
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 176/476 (36%), Positives = 251/476 (52%), Gaps = 72/476 (15%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHAGNVH----GTGDIACDGYHKYKED 85
FP F GA+T++YQ+EGA +E+G+ P+IWDT H + TGDIA D YH YKED
Sbjct: 12 FPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKED 71
Query: 86 VKLMADTGLDAYRFSISWSRLIPNGR-GPVNPKGLQYYNNLINELISYGIQPHVTLHHFD 144
VK++ + G YRFSISW+R++P G VN G+ YYNNLINEL++ GI+P VT++H+D
Sbjct: 72 VKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWD 131
Query: 145 LPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGY--DYGIA 202
LPQAL+D GGW N + K YA V F+ FGDRV W T N P F + GY + G+A
Sbjct: 132 LPQALQD-LGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNAPLTFMD-GYASEIGMA 189
Query: 203 PPQRCSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLL 262
P SIN G+ Y+ H V+ AHA + LY ++++ +Q G +G+++
Sbjct: 190 P-----SINTPGIGD-----YLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCE 239
Query: 263 PLTNSTEDAIATQRYYDFLIGWMANPLVY--GDYPKIMKQNVG----------SRLPAFS 310
P TNS ED + + Y F +G A+P+ GDYP ++K V SRLP F+
Sbjct: 240 PATNSAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFT 299
Query: 311 DRESKQVKGSADFLGVINYYIV----------------------------------YVKD 336
E + ++G+ DFLG IN+Y ++K
Sbjct: 300 AEEVEYIRGTHDFLG-INFYTALLGKSGVEGYEPSRYRDSGVILTQDAAWPISASSWLKV 358
Query: 337 NPSSLNKKLRDW--NADSATEIFCQNT--PRRSSLKDISRVKYLHAYIGSVLDAV-RNGS 391
P K+L +W N + +F L D RV Y ++ +L A+ +G
Sbjct: 359 VPWGFRKEL-NWIKNEYNNPPVFITENGFSDYGGLNDTGRVHYYTEHLKEMLKAIHEDGV 417
Query: 392 NIRGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFLKGRSL 447
N+ GY WS +D FE + GY +G+Y VD +DP R PK SA ++ + R +
Sbjct: 418 NVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESAKVLAEIMNTRKI 473
>pdb|3VIK|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Cellobiose
pdb|3VIL|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Salicin
Length = 487
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 176/476 (36%), Positives = 251/476 (52%), Gaps = 72/476 (15%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHAGNVH----GTGDIACDGYHKYKED 85
FP F GA+T++YQ+EGA +E+G+ P+IWDT H + TGDIA D YH YKED
Sbjct: 12 FPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKED 71
Query: 86 VKLMADTGLDAYRFSISWSRLIPNGR-GPVNPKGLQYYNNLINELISYGIQPHVTLHHFD 144
VK++ + G YRFSISW+R++P G VN G+ YYNNLINEL++ GI+P VT++H+D
Sbjct: 72 VKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWD 131
Query: 145 LPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGY--DYGIA 202
LPQAL+D GGW N + K YA V F+ FGDRV W T N P F + GY + G+A
Sbjct: 132 LPQALQD-LGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNSPLTFMD-GYASEIGMA 189
Query: 203 PPQRCSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLL 262
P SIN G+ Y+ H V+ AHA + LY ++++ +Q G +G+++
Sbjct: 190 P-----SINTPGIGD-----YLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCE 239
Query: 263 PLTNSTEDAIATQRYYDFLIGWMANPLVY--GDYPKIMKQNVG----------SRLPAFS 310
P TNS ED + + Y F +G A+P+ GDYP ++K V SRLP F+
Sbjct: 240 PATNSAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFT 299
Query: 311 DRESKQVKGSADFLGVINYYIV----------------------------------YVKD 336
E + ++G+ DFLG IN+Y ++K
Sbjct: 300 AEEVEYIRGTHDFLG-INFYTALLGKSGVEGYEPSRYRDSGVILTQDAAWPISASSWLKV 358
Query: 337 NPSSLNKKLRDW--NADSATEIFCQNT--PRRSSLKDISRVKYLHAYIGSVLDAV-RNGS 391
P K+L +W N + +F L D RV Y ++ +L A+ +G
Sbjct: 359 VPWGFRKEL-NWIKNEYNNPPVFITENGFSDYGGLNDTGRVHYYTEHLKEMLKAIHEDGV 417
Query: 392 NIRGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFLKGRSL 447
N+ GY WS +D FE + GY +G+Y VD +DP R PK SA ++ + R +
Sbjct: 418 NVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESAKVLAEIMNTRKI 473
>pdb|1WCG|A Chain A, Aphid Myrosinase
pdb|1WCG|B Chain B, Aphid Myrosinase
Length = 464
Score = 260 bits (665), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 167/453 (36%), Positives = 227/453 (50%), Gaps = 64/453 (14%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHAGN---VHGT-GDIACDGYHKYKED 85
FP F+FG ST++YQ+EG NEDG+ +IWD H GT GDIACD YHKYKED
Sbjct: 5 FPKDFMFGTSTASYQIEGGWNEDGKGENIWDRLVHTSPEVIKDGTNGDIACDSYHKYKED 64
Query: 86 VKLMADTGLDAYRFSISWSRLIPNG-RGPVNPKGLQYYNNLINELISYGIQPHVTLHHFD 144
V ++ D L YRFSISW+R+ P+G + PKG+ YYNNLINELI I P VT++H+D
Sbjct: 65 VAIIKDLNLKFYRFSISWARIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYHWD 124
Query: 145 LPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPP 204
LPQ L+D GGW+N + F YA V F FGDRV +W T NEP A GY P
Sbjct: 125 LPQYLQD-LGGWVNPIMSDYFKEYARVLFTYFGDRVKWWITFNEPIAVCK-GYSIKAYAP 182
Query: 205 QRCSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLLPL 264
++N + G+ Y+ H L+AH RLY + ++ Q G I ++I +P
Sbjct: 183 ----NLNLKTTGH-----YLAGHTQLIAHGKAYRLYEEMFKPTQNGKISISISGVFFMPK 233
Query: 265 TNSTEDAIAT-QRYYDFLIGWMANPLVYGDYPKIMKQNVG----------SRLPAFSDRE 313
++D I T +R F GW +P+ GDYP IMK+ V S+LP F+ E
Sbjct: 234 NAESDDDIETAERANQFERGWFGHPVYKGDYPPIMKKWVDQKSKEEGLPWSKLPKFTKDE 293
Query: 314 SKQVKGSADFLGVINY------------------------------------YIVYVKDN 337
K +KG+ADF + +Y YI+ V +
Sbjct: 294 IKLLKGTADFYALNHYSSRLVTFGSDPNPNFNPDASYVTSVDEAWLKPNETPYIIPVPEG 353
Query: 338 PSSLNKKLRDWNADSATEIFCQNTPRRSSLKDISRVKYLHAYIGSVLDAV-RNGSNIRGY 396
L L++ + I L D ++ YL Y+ + L A+ + N+ GY
Sbjct: 354 LRKLLIWLKNEYGNPQLLITENGYGDDGQLDDFEKISYLKNYLNATLQAMYEDKCNVIGY 413
Query: 397 FMWSFLDVFELMDGYESSYGLYYVDRDDPDLKR 429
+WS LD FE GY +GL +D +DP R
Sbjct: 414 TVWSLLDNFEWFYGYSIHFGLVKIDFNDPQRTR 446
>pdb|1OD0|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OD0|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIF|A Chain A, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIF|B Chain B, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIM|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIM|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1W3J|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1W3J|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1UZ1|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|1UZ1|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|2CBU|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBU|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBV|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CBV|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CES|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CES|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CET|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2CET|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2J77|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J77|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J78|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J78|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J79|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J79|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J7B|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7B|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7C|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7C|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7D|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7D|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7E|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7E|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7F|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7F|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7G|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7G|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7H|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J7H|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J75|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2J75|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2JAL|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2JAL|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2VRJ|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2VRJ|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2WBG|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WC3|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC4|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
Length = 468
Score = 258 bits (660), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 162/459 (35%), Positives = 239/459 (52%), Gaps = 59/459 (12%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHA-GNVHG--TGDIACDGYHKYKEDV 86
FP GFL+G +T++YQ+EG+ DG SIW TF+H GNV TGD+ACD Y+++KED+
Sbjct: 28 FPEGFLWGVATASYQIEGSPLADGAGMSIWHTFSHTPGNVKNGDTGDVACDHYNRWKEDI 87
Query: 87 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHFDLP 146
+++ G+ AYRFSISW R++P G G VN KGL +YN +I+ L+ GI P VT++H+DLP
Sbjct: 88 EIIEKLGVKAYRFSISWPRILPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTIYHWDLP 147
Query: 147 QALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGI-APPQ 205
AL+ + GGW NR I F Y+ V F FGDRV W T+NEP A +G+ YG+ AP
Sbjct: 148 FALQLK-GGWANREIADWFAEYSRVLFENFGDRVKNWITLNEPWVVAIVGHLYGVHAPGM 206
Query: 206 RCSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLLPLT 265
R + + VH++L AHA +++R+ +D G IG+ +F G
Sbjct: 207 RDIYV-----------AFRAVHNLLRAHARAVKVFRETVKD---GKIGI-VFNNGYFEPA 251
Query: 266 NSTEDAIATQRYYDFLIGW--MANPLVYGDYPKIMKQNVGSRLPAFSDRESKQVKGSADF 323
+ E+ I R+ + NP+ GDYP+++ + LP + +++ DF
Sbjct: 252 SEKEEDIRAVRFMHQFNNYPLFLNPIYRGDYPELVLEFAREYLPENYKDDMSEIQEKIDF 311
Query: 324 LGVINYY----IVYVKDNPSSLNKKLRD----------------WNADSATE-------- 355
+G +NYY + + D P+ ++ RD W E
Sbjct: 312 VG-LNYYSGHLVKFDPDAPAKVSFVERDLPKTAMGWEIVPEGIYWILKKVKEEYNPPEVY 370
Query: 356 ------IFCQNTPRRSSLKDISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFELMD 409
F + D +R+ YL A+IG A++ G ++GYF+WS LD FE +
Sbjct: 371 ITENGAAFDDVVSEDGRVHDQNRIDYLKAHIGQAWKAIQEGVPLKGYFVWSLLDNFEWAE 430
Query: 410 GYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFLKGRSLS 448
GY +G+ YVD KR K S +WYS +K L
Sbjct: 431 GYSKRFGIVYVDYSTQ--KRIVKDSGYWYSNVVKNNGLE 467
>pdb|1GNX|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GNX|B Chain B, B-Glucosidase From Streptomyces Sp
pdb|1GON|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GON|B Chain B, B-Glucosidase From Streptomyces Sp
Length = 479
Score = 258 bits (660), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 169/471 (35%), Positives = 238/471 (50%), Gaps = 73/471 (15%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHA-GNVHG--TGDIACDGYHKYKEDV 86
FP GFL+G++T++YQ+EGAA EDGRTPSIWDT+A G V TGD+A D YH+++EDV
Sbjct: 18 FPEGFLWGSATASYQIEGAAAEDGRTPSIWDTYARTPGRVRNGDTGDVATDHYHRWREDV 77
Query: 87 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHFDLP 146
LMA+ GL AYRFS++W R+ P GRGP KGL +Y L +EL++ GIQP TL+H+DLP
Sbjct: 78 ALMAELGLGAYRFSLAWPRIQPTGRGPALQKGLDFYRRLADELLAKGIQPVATLYHWDLP 137
Query: 147 QALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPPQR 206
Q LE+ GGW R + F YA + GDRV WTT+NEP A LGY G+ P R
Sbjct: 138 QELENA-GGWPERATAERFAEYAAIAADALGDRVKTWTTLNEPWCSAFLGYGSGVHAPGR 196
Query: 207 CSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLLPLTN 266
+ HH+ L H + R + + + +NI + PLT+
Sbjct: 197 TDPVAALR----------AAHHLNLGHGLAVQALRDRLPADAQCSVTLNIHH--VRPLTD 244
Query: 267 STEDAIATQRYYDFLIGWMANPLVYGDYPK-IMKQNVGSRLPAF-SDRESKQVKGSADFL 324
S DA A +R P++ G YP+ ++K G +F D + + DFL
Sbjct: 245 SDADADAVRRIDALANRVFTGPMLQGAYPEDLVKDTAGLTDWSFVRDGDLRLAHQKLDFL 304
Query: 325 GVINYY---IVYVKD----------------------------------------NPSSL 341
GV NYY +V D +PS L
Sbjct: 305 GV-NYYSPTLVSEADGSGTHNSDGHGRSAHSPWPGADRVAFHQPPGETTAMGWAVDPSGL 363
Query: 342 NKKLRDWNAD--SATEIFCQNTPR-------RSSLKDISRVKYLHAYIGSVLDAVRNGSN 392
+ LR ++D + + +N ++ D R+ Y+ ++ +V A+++GS+
Sbjct: 364 YELLRRLSSDFPALPLVITENGAAFHDYADPEGNVNDPERIAYVRDHLAAVHRAIKDGSD 423
Query: 393 IRGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFLK 443
+RGYF+WS LD FE GY +G YVD P R PK SA WY++ +
Sbjct: 424 VRGYFLWSLLDNFEWAHGYSKRFGAVYVDY--PTGTRIPKASARWYAEVAR 472
>pdb|3AHX|A Chain A, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|B Chain B, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|C Chain C, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|D Chain D, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
Length = 453
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 160/453 (35%), Positives = 235/453 (51%), Gaps = 56/453 (12%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHA-GNVHGT--GDIACDGYHKYKEDV 86
FP F+FG +T+AYQ+EGA ED + SIWD F+H GNV GDIACD YH+YKEDV
Sbjct: 6 FPKDFIFGTATAAYQIEGAYKEDEKGESIWDRFSHIPGNVAKMHNGDIACDHYHRYKEDV 65
Query: 87 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHFDLP 146
+L+ G+ +YRFSI+W R+ P G G +N KG+Q+Y +LI+ELI I+P +T++H+DLP
Sbjct: 66 QLLKSLGIKSYRFSIAWPRIFPKGFGEINQKGIQFYRDLIDELIKNDIEPAITIYHWDLP 125
Query: 147 QALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPPQR 206
Q L+D GGW N + + YA++ FR+FGDRV W T NEP + LGY G+
Sbjct: 126 QKLQD-IGGWANPQVADYYVDYANLLFREFGDRVKTWITHNEPWVASYLGYALGV----- 179
Query: 207 CSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLLPLTN 266
H + H++LL+H + YR+ QD G IG+ + +
Sbjct: 180 -----HAPGIKDMKMALLAAHNILLSHFKAVKAYRELEQD---GQIGITLNLSTCYSNSA 231
Query: 267 STEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSR--LPAFSDRESKQVKGSADFL 324
ED A R + W + + G YP+ M + +P +V ++DFL
Sbjct: 232 DEEDIAAAHRSDGWNNRWFLDAALKGTYPEDMIKIFSDTNIMPELPKELFTEVFETSDFL 291
Query: 325 GVINYYIVYV---------------KDNPSS--------------LNKKLRDW-NADS-A 353
G INYY V DNP + L + RD+ N D
Sbjct: 292 G-INYYTRQVVKNNSEAFIGAESVAMDNPKTEMGWEIYPQGLYDLLTRIHRDYGNIDLYI 350
Query: 354 TE---IFCQNTPRRSSLKDISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFELMDG 410
TE F R ++D +R+ YL+ + + L A+ G ++GY++WSF+D FE +G
Sbjct: 351 TENGAAFNDMVNRDGKVEDENRLDYLYTHFAAALSAIEAGVPLKGYYIWSFMDNFEWAEG 410
Query: 411 YESSYGLYYVDRDDPDLKRYPKLSAHWYSQFLK 443
YE +G+ +V+ + R K SA+WY + ++
Sbjct: 411 YEKRFGIVHVNYKTQE--RTIKKSAYWYKELIE 441
>pdb|3TA9|A Chain A, Beta-Glucosidase A From The Halothermophile H. Orenii
pdb|3TA9|B Chain B, Beta-Glucosidase A From The Halothermophile H. Orenii
Length = 458
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 157/463 (33%), Positives = 235/463 (50%), Gaps = 59/463 (12%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHA-GNVHG--TGDIACDGYHKYKEDV 86
FP F++GA+TS+YQ+EGA NEDG+ SIWD F+H G + TGDIACD YH Y+ED+
Sbjct: 13 FPEDFIWGAATSSYQIEGAFNEDGKGESIWDRFSHTPGKIENGDTGDIACDHYHLYREDI 72
Query: 87 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHFDLP 146
+LM + G+ +YRFS SW R++P G+G VN KGL +Y L++ L+ I+P +TL+H+DLP
Sbjct: 73 ELMKEIGIRSYRFSTSWPRILPEGKGRVNQKGLDFYKRLVDNLLKANIRPMITLYHWDLP 132
Query: 147 QALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPPQR 206
QAL+D+ GGW NR K F YA + F +F V W T NEP A G+ +G
Sbjct: 133 QALQDK-GGWTNRDTAKYFAEYARLMFEEFNGLVDLWVTHNEPWVVAFEGHAFG------ 185
Query: 207 CSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLLPLTN 266
NH HH+LL+H ++R ++ G IG+ + P +
Sbjct: 186 ----NHAPGTKDFKTALQVAHHLLLSHGMAVDIFR---EEDLPGEIGITLNLTPAYPAGD 238
Query: 267 STEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFSDRESKQ--VKGSADFL 324
S +D A D++ W +P+ G YP+ + L AF+ + + DFL
Sbjct: 239 SEKDVKAASLLDDYINAWFLSPVFKGSYPEELHHIYEQNLGAFTTQPGDMDIISRDIDFL 298
Query: 325 GVINYY-----------------IVYVKDNPSS-----------------LNKKLRDWNA 350
G INYY +V ++D PS+ +NK+ D
Sbjct: 299 G-INYYSRMVVRHKPGDNLFNAEVVKMEDRPSTEMGWEIYPQGLYDILVRVNKEYTD-KP 356
Query: 351 DSATE---IFCQNTPRRSSLKDISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFEL 407
TE F + D R+ YL + A+++G +RGY++WS +D FE
Sbjct: 357 LYITENGAAFDDKLTEEGKIHDEKRINYLGDHFKQAYKALKDGVPLRGYYVWSLMDNFEW 416
Query: 408 MDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFLKGRSLSSD 450
GY +GL YVD ++ + +R+ K SA WY + ++ + ++
Sbjct: 417 AYGYSKRFGLIYVDYENGN-RRFLKDSALWYREVIEKGQVEAN 458
>pdb|1QOX|A Chain A, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|B Chain B, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|C Chain C, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|D Chain D, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|E Chain E, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|F Chain F, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|G Chain G, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|H Chain H, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|I Chain I, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|J Chain J, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|K Chain K, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|L Chain L, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|M Chain M, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|N Chain N, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|O Chain O, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|P Chain P, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
Length = 449
Score = 251 bits (642), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 162/457 (35%), Positives = 231/457 (50%), Gaps = 63/457 (13%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHA-GNVHG--TGDIACDGYHKYKEDV 86
FP F +G +T+AYQ+EGA NEDGR SIWDTFAH G V G++ACD YH+ +EDV
Sbjct: 5 FPSDFKWGVATAAYQIEGAYNEDGRGMSIWDTFAHTPGKVKNGDNGNVACDSYHRVEEDV 64
Query: 87 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHFDLP 146
+L+ D G+ YRFSISW R++P G G VN GL YY+ L++EL++ GI+P TL+H+DLP
Sbjct: 65 QLLKDLGVKVYRFSISWPRVLPQGTGEVNRAGLDYYHRLVDELLANGIEPFCTLYHWDLP 124
Query: 147 QALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPPQR 206
QAL+D+ GGW +R + F YA++ F++ G ++ W T NEP A L G+ P
Sbjct: 125 QALQDQ-GGWGSRITIDAFAEYAELMFKELGGKIKQWITFNEPWCMAFLSNYLGVHAP-- 181
Query: 207 CSSINHCSRGNSSTEPYITV-HHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLLPLT 265
GN + I V HH+L+AH L+R+ G IG+ +P
Sbjct: 182 ---------GNKDLQLAIDVSHHLLVAHGRAVTLFREL---GISGEIGIAPNTSWAVPYR 229
Query: 266 NSTEDAIATQRYYDFLIGWMANPLVYGDYPKIMK---QNVGSRLPAFSDRESKQVKGSAD 322
+ ED A R + W +P+ +G+YPK M +N+G + P D + + + D
Sbjct: 230 RTKEDMEACLRVNGWSGDWYLDPIYFGEYPKFMLDWYENLGYK-PPIVDGDMELIHQPID 288
Query: 323 FLGVINYYIVYV-KDNPSSLNKKLRDW-------NADSATEIF----------------- 357
F+G INYY + + NP L D EI+
Sbjct: 289 FIG-INYYTSSMNRYNPGEAGGMLSSEAISMGAPKTDIGWEIYAEGLYDLLRYTADKYGN 347
Query: 358 ----------CQN--TPRRSSLKDISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVF 405
C N + D R+ YL ++ A+ +G N++GY WS +D F
Sbjct: 348 PTLYITENGACYNDGLSLDGRIHDQRRIDYLAMHLIQASRAIEDGINLKGYMEWSLMDNF 407
Query: 406 ELMDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFL 442
E +GY +GL +VD D L R PK S +WY +
Sbjct: 408 EWAEGYGMRFGLVHVDYD--TLVRTPKDSFYWYKGVI 442
>pdb|3AHY|A Chain A, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|B Chain B, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|C Chain C, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|D Chain D, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
Length = 473
Score = 251 bits (641), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 166/463 (35%), Positives = 239/463 (51%), Gaps = 69/463 (14%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTF-AHAGNVH--GTGDIACDGYHKYKEDV 86
P F +G +T+AYQ+EGA ++DGR PSIWDTF A G + +G ACD Y++ ED+
Sbjct: 9 LPKDFQWGFATAAYQIEGAVDQDGRGPSIWDTFCAQPGKIADGSSGVTACDSYNRTAEDI 68
Query: 87 KLMADTGLDAYRFSISWSRLIPNG-RG-PVNPKGLQYYNNLINELISYGIQPHVTLHHFD 144
L+ G +YRFSISWSR+IP G RG VN G+ +Y +++L+ GI P +TL H+D
Sbjct: 69 ALLKSLGAKSYRFSISWSRIIPEGGRGDAVNQAGIDHYVKFVDDLLDAGITPFITLFHWD 128
Query: 145 LPQALEDEYGGWINRT-IVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAP 203
LP+ L YGG +NRT DF YA V FR +V W T NEP A GY G
Sbjct: 129 LPEGLHQRYGGLLNRTEFPLDFENYARVMFRAL-PKVRNWITFNEPLCSAIPGYGSGTFA 187
Query: 204 PQRCSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQ-RGYIGVNIFAFGLL 262
P R S++EP+ H++L+AH + YR ++ G IG+ +
Sbjct: 188 PGR----------QSTSEPWTVGHNILVAHGRAVKAYRDDFKPASGDGQIGIVLNGDFTY 237
Query: 263 PLTNS-TEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFSDRESKQVKGSA 321
P + D A +R +F W A+P+ GDYP M++ +G RLP F+ E V GS
Sbjct: 238 PWDAADPADKEAAERRLEFFTAWFADPIYLGDYPASMRKQLGDRLPTFTPEERALVHGSN 297
Query: 322 DFLGVINYYIVYV--KDNPSS------------LNKK-------------------LRD- 347
DF G+ +Y Y+ + +P+S NK+ RD
Sbjct: 298 DFYGMNHYTSNYIRHRSSPASADDTVGNVDVLFTNKQGNCIGPETQSPWLRPCAAGFRDF 357
Query: 348 -------------WNADSATEIFCQ-NTPRRSSLKDISRVKYLHAYIGSVLDAVR-NGSN 392
+ ++ T I + + P+ L+D RVKY + YI +++ AV +G N
Sbjct: 358 LVWISKRYGYPPIYVTENGTSIKGESDLPKEKILEDDFRVKYYNEYIRAMVTAVELDGVN 417
Query: 393 IRGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSA 435
++GYF WS +D FE DGY + +G+ YVD ++ KR+PK SA
Sbjct: 418 VKGYFAWSLMDNFEWADGYVTRFGVTYVDYENGQ-KRFPKKSA 459
>pdb|2O9P|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa
pdb|2O9T|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
Glucose
pdb|2Z1S|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa Complexed
With Cellotetraose
Length = 454
Score = 248 bits (633), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 155/456 (33%), Positives = 232/456 (50%), Gaps = 63/456 (13%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHA-GNVHG--TGDIACDGYHKYKEDV 86
FP F++G STS+YQ+EG +E GRTPSIWDTF G V G GD+ACD +H +KEDV
Sbjct: 14 FPATFMWGTSTSSYQIEGGTDEGGRTPSIWDTFCQIPGKVIGGDCGDVACDHFHHFKEDV 73
Query: 87 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHFDLP 146
+LM G YRFS++W R++P G +N +GL +Y +L++E+ G+ P +TL+H+DLP
Sbjct: 74 QLMKQLGFLHYRFSVAWPRIMP-AAGIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLP 132
Query: 147 QALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPPQR 206
Q +EDE GGW R ++ F YA V +FG+R+++W T+NEP + LGY G
Sbjct: 133 QWIEDE-GGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTG------ 185
Query: 207 CSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLLPLTN 266
H + E + HH+L+ H + L+++K G IG+ + + +
Sbjct: 186 ----EHAPGHENWREAFTAAHHILMCHGIASNLHKEK---GLTGKIGITLNMEHVDAASE 238
Query: 267 STEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAF-----SDRESKQVKGSA 321
ED A R F+ W A PL G YP+ M + G+ L D E Q G
Sbjct: 239 RPEDVAAAIRRDGFINRWFAEPLFNGKYPEDMVEWYGTYLNGLDFVQPGDMELIQQPG-- 296
Query: 322 DFLGVINYYI-----------------VYVKD---------NPSSLNKKL----RDWNAD 351
DFLG INYY V++++ +P S K L +D++
Sbjct: 297 DFLG-INYYTRSIIRSTNDASLLQVEQVHMEEPVTDMGWEIHPESFYKLLTRIEKDFSKG 355
Query: 352 SATEIFCQNTPRRSSL-----KDISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFE 406
I R L +D R +Y+ ++ + + G ++GYF+WSFLD FE
Sbjct: 356 LPILITENGAAMRDELVNGQIEDTGRQRYIEEHLKACHRFIEEGGQLKGYFVWSFLDNFE 415
Query: 407 LMDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFL 442
GY +G+ +++ + + R PK SA W+ Q +
Sbjct: 416 WAWGYSKRFGIVHINYETQE--RTPKQSALWFKQMM 449
>pdb|2O9R|A Chain A, Beta-Glucosidase B Complexed With Thiocellobiose
Length = 452
Score = 248 bits (633), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 155/456 (33%), Positives = 232/456 (50%), Gaps = 63/456 (13%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHA-GNVHG--TGDIACDGYHKYKEDV 86
FP F++G STS+YQ+EG +E GRTPSIWDTF G V G GD+ACD +H +KEDV
Sbjct: 12 FPATFMWGTSTSSYQIEGGTDEGGRTPSIWDTFCQIPGKVIGGDCGDVACDHFHHFKEDV 71
Query: 87 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHFDLP 146
+LM G YRFS++W R++P G +N +GL +Y +L++E+ G+ P +TL+H+DLP
Sbjct: 72 QLMKQLGFLHYRFSVAWPRIMP-AAGIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLP 130
Query: 147 QALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPPQR 206
Q +EDE GGW R ++ F YA V +FG+R+++W T+NEP + LGY G
Sbjct: 131 QWIEDE-GGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTG------ 183
Query: 207 CSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLLPLTN 266
H + E + HH+L+ H + L+++K G IG+ + + +
Sbjct: 184 ----EHAPGHENWREAFTAAHHILMCHGIASNLHKEK---GLTGKIGITLNMEHVDAASE 236
Query: 267 STEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAF-----SDRESKQVKGSA 321
ED A R F+ W A PL G YP+ M + G+ L D E Q G
Sbjct: 237 RPEDVAAAIRRDGFINRWFAEPLFNGKYPEDMVEWYGTYLNGLDFVQPGDMELIQQPG-- 294
Query: 322 DFLGVINYYI-----------------VYVKD---------NPSSLNKKL----RDWNAD 351
DFLG INYY V++++ +P S K L +D++
Sbjct: 295 DFLG-INYYTRSIIRSTNDASLLQVEQVHMEEPVTDMGWEIHPESFYKLLTRIEKDFSKG 353
Query: 352 SATEIFCQNTPRRSSL-----KDISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFE 406
I R L +D R +Y+ ++ + + G ++GYF+WSFLD FE
Sbjct: 354 LPILITENGAAMRDELVNGQIEDTGRQRYIEEHLKACHRFIEEGGQLKGYFVWSFLDNFE 413
Query: 407 LMDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFL 442
GY +G+ +++ + + R PK SA W+ Q +
Sbjct: 414 WAWGYSKRFGIVHINYETQE--RTPKQSALWFKQMM 447
>pdb|2JIE|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
2- F-Glucose
Length = 454
Score = 246 bits (628), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 155/456 (33%), Positives = 231/456 (50%), Gaps = 63/456 (13%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHA-GNVHG--TGDIACDGYHKYKEDV 86
FP F++G STS+YQ+EG +E GRTPSIWDTF G V G GD+ACD +H +KEDV
Sbjct: 14 FPATFMWGTSTSSYQIEGGTDEGGRTPSIWDTFCQIPGKVIGGDCGDVACDHFHHFKEDV 73
Query: 87 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHFDLP 146
+LM G YRFS++W R++P G +N +GL +Y +L++E+ G+ P +TL+H+DLP
Sbjct: 74 QLMKQLGFLHYRFSVAWPRIMP-AAGIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLP 132
Query: 147 QALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPPQR 206
Q +EDE GGW R ++ F YA V +FG+R+++W T+NEP + LGY G
Sbjct: 133 QWIEDE-GGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTG------ 185
Query: 207 CSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLLPLTN 266
H + E + HH+L+ H + L+++K G IG+ + + +
Sbjct: 186 ----EHAPGHENWREAFTAAHHILMCHGIASNLHKEK---GLTGKIGITLNMEHVDAASE 238
Query: 267 STEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAF-----SDRESKQVKGSA 321
ED A R F+ W A PL G YP+ M + G+ L D E Q G
Sbjct: 239 RPEDVAAAIRRDGFINRWFAEPLFNGKYPEDMVEWYGTYLNGLDFVQPGDMELIQQPG-- 296
Query: 322 DFLGVINYYI-----------------VYVKD---------NPSSLNKKL----RDWNAD 351
DFLG INYY V++++ +P S K L +D++
Sbjct: 297 DFLG-INYYTRSIIRSTNDASLLQVEQVHMEEPVTDMGWEIHPESFYKLLTRIEKDFSKG 355
Query: 352 SATEIFCQNTPRRSSL-----KDISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFE 406
I R L +D R Y+ ++ + + G ++GYF+WSFLD FE
Sbjct: 356 LPILITENGAAMRDELVNGQIEDTGRHGYIEEHLKACHRFIEEGGQLKGYFVWSFLDNFE 415
Query: 407 LMDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFL 442
GY +G+ +++ + + R PK SA W+ Q +
Sbjct: 416 WAWGYSKRFGIVHINYETQE--RTPKQSALWFKQMM 449
>pdb|1E4I|A Chain A, 2-Deoxy-2-Fluoro-Beta-D-GlucosylENZYME INTERMEDIATE
Complex Of The Beta-Glucosidase From Bacillus Polymyxa
Length = 447
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 156/460 (33%), Positives = 231/460 (50%), Gaps = 59/460 (12%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHA-GNVHG--TGDIACDGYHKYKEDV 86
FP F++G +T+AYQ+EGA EDGR SIWDTFAH G V G++ACD YH+Y+ED+
Sbjct: 5 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEEDI 64
Query: 87 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHFDLP 146
+LM + G+ YRFS+SW R+ PNG G VN KGL YY+ +++ L GI+P TL+H+DLP
Sbjct: 65 RLMKELGIRTYRFSVSWPRIFPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHWDLP 124
Query: 147 QALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPPQR 206
QAL+D GGW NR ++ F +A+ FR+F ++ +W T NEP A L G+ P
Sbjct: 125 QALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAP-- 181
Query: 207 CSSINHCSRGNSSTEPYITV-HHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLLPLT 265
G ++ + I V HH+L+AH R +R+ G IG+ +P +
Sbjct: 182 ---------GLTNLQTAIDVGHHLLVAHGLSVRRFREL---GTSGQIGIAPNVSWAVPYS 229
Query: 266 NSTEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQ---NVGSRLPAFSDRESKQVKGSAD 322
S ED A R W P+ G YP+ + G+ +P D + + D
Sbjct: 230 TSEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVP-IQDGDMDIIGEPID 288
Query: 323 FLGVINYYIVYV-KDNPSS-------LNKKLR----DWNADSA--------------TEI 356
+G INYY + V + NP + +N L W +S +I
Sbjct: 289 MIG-INYYSMSVNRFNPEAGFLQSEEINMGLPVTDIGWPVESRGLYEVLHYLQKYGNIDI 347
Query: 357 F------CQNTP-RRSSLKDISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFELMD 409
+ C N ++D R+ Y+ ++ V + +G +++GY WS LD FE +
Sbjct: 348 YITENGACINDEVVNGKVQDDRRISYMQQHLVQVHRTIHDGLHVKGYMAWSLLDNFEWAE 407
Query: 410 GYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFLKGRSLSS 449
GY +G+ +VD R PK S +WY + L +
Sbjct: 408 GYNMRFGMIHVDFRTQ--VRTPKQSYYWYRNVVSNNWLET 445
>pdb|1UYQ|A Chain A, Mutated B-Glucosidase A From Paenibacillus Polymyxa
Showing Increased Stability
Length = 447
Score = 240 bits (612), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 156/460 (33%), Positives = 232/460 (50%), Gaps = 59/460 (12%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHA-GNVHG--TGDIACDGYHKYKEDV 86
FP F++G +T+AYQ+EGA EDGR SIWDTFAH G V G++ACD YH+Y+ED+
Sbjct: 5 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEEDI 64
Query: 87 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHFDLP 146
+LM + G+ YRFS+SW R+ PNG G VN +GL YY+ +++ L GI+P TL+H+DLP
Sbjct: 65 RLMKELGIRTYRFSVSWPRIFPNGDGEVNQEGLDYYHRVVDLLNDNGIEPFCTLYHWDLP 124
Query: 147 QALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPPQR 206
QAL+D GGW NR ++ F +A+ FR+F ++ +W T NEP A L G+ P
Sbjct: 125 QALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAP-- 181
Query: 207 CSSINHCSRGNSSTEPYITV-HHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLLPLT 265
G ++ + I V HH+L+AH R +R+ G IG+ +P +
Sbjct: 182 ---------GLTNLQTAIDVGHHLLVAHGLSVRRFREL---GTSGQIGIAPNVSWAVPYS 229
Query: 266 NSTEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQ---NVGSRLPAFSDRESKQVKGSAD 322
S ED A R W P+ G YP+ + G+ +P D + + D
Sbjct: 230 TSEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVP-IQDGDMDIIGEPID 288
Query: 323 FLGVINYYIVYV-KDNPSS-------LNKKLR----DWNADSA--------------TEI 356
+G INYY + V + NP + +N L W +S +I
Sbjct: 289 MIG-INYYSMSVNRFNPEAGFLQSEEINMGLPVTDIGWPVESRGLYEVLHYLQKYGNIDI 347
Query: 357 F------CQNTP-RRSSLKDISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFELMD 409
+ C N ++D R+ Y+ ++ V A+ +G +++GY WS LD FE +
Sbjct: 348 YITENGACINDEVVNGKVQDDRRISYMQQHLVQVHRAIHDGLHVKGYMAWSLLDNFEWAE 407
Query: 410 GYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFLKGRSLSS 449
GY +G+ +VD R PK S +WY + L +
Sbjct: 408 GYNMRFGMIHVDFRTQ--VRTPKQSYYWYRNVVGNNWLET 445
>pdb|1TR1|A Chain A, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|B Chain B, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|C Chain C, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|D Chain D, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
Length = 447
Score = 240 bits (612), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 156/460 (33%), Positives = 231/460 (50%), Gaps = 59/460 (12%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHA-GNVHG--TGDIACDGYHKYKEDV 86
FP F++G +T+AYQ+EGA EDGR SIWDTFAH G V G++ACD YH+Y+ED+
Sbjct: 5 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEEDI 64
Query: 87 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHFDLP 146
+LM + G+ YRFS+SW R+ PNG G VN KGL YY+ +++ L GI+P TL+H+DLP
Sbjct: 65 RLMKELGIRTYRFSVSWPRIFPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHWDLP 124
Query: 147 QALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPPQR 206
QAL+D GGW NR ++ F +A+ FR+F ++ +W T NEP A L G+ P
Sbjct: 125 QALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAP-- 181
Query: 207 CSSINHCSRGNSSTEPYITV-HHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLLPLT 265
G ++ + I V HH+L+AH R +R+ G IG+ +P +
Sbjct: 182 ---------GLTNLQTAIDVGHHLLVAHGLSVRRFREL---GTSGQIGIAPNVSWAVPYS 229
Query: 266 NSTEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQ---NVGSRLPAFSDRESKQVKGSAD 322
S ED A R W P+ G YP+ + G+ +P D + + D
Sbjct: 230 TSEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVP-IQDGDMDIIGEPID 288
Query: 323 FLGVINYYIVYV-KDNPSS-------LNKKLR----DWNADSA--------------TEI 356
+G INYY + V + NP + +N L W +S +I
Sbjct: 289 MIG-INYYSMSVNRFNPEAGFLQSEEINMGLPVTDIGWPVESRGLYEVLHYLQKYGNIDI 347
Query: 357 F------CQNTP-RRSSLKDISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFELMD 409
+ C N ++D R+ Y+ ++ V + +G +++GY WS LD FE +
Sbjct: 348 YITENGACINDEVVNGKVQDDRRISYMQQHLVQVHRTIHDGLHVKGYMAWSLLDNFEWAE 407
Query: 410 GYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFLKGRSLSS 449
GY +G+ +VD R PK S +WY + L +
Sbjct: 408 GYNMRFGMIHVDFRTQ--VRTPKESYYWYRNVVSNNWLET 445
>pdb|1BGA|A Chain A, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|B Chain B, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|C Chain C, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|D Chain D, Beta-Glucosidase A From Bacillus Polymyxa
Length = 447
Score = 239 bits (609), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 155/460 (33%), Positives = 231/460 (50%), Gaps = 59/460 (12%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHA-GNVHG--TGDIACDGYHKYKEDV 86
FP F++G +T+AYQ+EGA EDGR SIWDTFAH G V G++ACD YH+Y+ED+
Sbjct: 5 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEEDI 64
Query: 87 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHFDLP 146
+LM + G+ YRFS+SW R+ PNG G VN +GL YY+ +++ L GI+P TL+H+DLP
Sbjct: 65 RLMKELGIRTYRFSVSWPRIFPNGDGEVNQEGLDYYHRVVDLLNDNGIEPFCTLYHWDLP 124
Query: 147 QALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPPQR 206
QAL+D GGW NR ++ F +A+ FR+F ++ +W T NEP A L G+ P
Sbjct: 125 QALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAP-- 181
Query: 207 CSSINHCSRGNSSTEPYITV-HHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLLPLT 265
G ++ + I V HH+L+AH R +R+ G IG+ +P +
Sbjct: 182 ---------GLTNLQTAIDVGHHLLVAHGLSVRRFREL---GTSGQIGIAPNVSWAVPYS 229
Query: 266 NSTEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQ---NVGSRLPAFSDRESKQVKGSAD 322
S ED A R W P+ G YP+ + G+ +P D + + D
Sbjct: 230 TSEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVP-IQDGDMDIIGEPID 288
Query: 323 FLGVINYYIVYV-KDNPSS-------LNKKLR----DWNADSA--------------TEI 356
+G INYY + V + NP + +N L W +S +I
Sbjct: 289 MIG-INYYSMSVNRFNPEAGFLQSEEINMGLPVTDIGWPVESRGLYEVLHYLQKYGNIDI 347
Query: 357 F------CQNTP-RRSSLKDISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFELMD 409
+ C N ++D R+ Y+ ++ V + +G +++GY WS LD FE +
Sbjct: 348 YITENGACINDEVVNGKVQDDRRISYMQQHLVQVHRTIHDGLHVKGYMAWSLLDNFEWAE 407
Query: 410 GYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFLKGRSLSS 449
GY +G+ +VD R PK S +WY + L +
Sbjct: 408 GYNMRFGMIHVDFRTQ--VRTPKESYYWYRNVVSNNWLET 445
>pdb|1BGG|A Chain A, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|B Chain B, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|C Chain C, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|D Chain D, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
Length = 448
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 155/460 (33%), Positives = 231/460 (50%), Gaps = 59/460 (12%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHA-GNVHG--TGDIACDGYHKYKEDV 86
FP F++G +T+AYQ+EGA EDGR SIWDTFAH G V G++ACD YH+Y+ED+
Sbjct: 6 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEEDI 65
Query: 87 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHFDLP 146
+LM + G+ YRFS+SW R+ PNG G VN +GL YY+ +++ L GI+P TL+H+DLP
Sbjct: 66 RLMKELGIRTYRFSVSWPRIFPNGDGEVNQEGLDYYHRVVDLLNDNGIEPFCTLYHWDLP 125
Query: 147 QALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPPQR 206
QAL+D GGW NR ++ F +A+ FR+F ++ +W T NEP A L G+ P
Sbjct: 126 QALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAP-- 182
Query: 207 CSSINHCSRGNSSTEPYITV-HHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLLPLT 265
G ++ + I V HH+L+AH R +R+ G IG+ +P +
Sbjct: 183 ---------GLTNLQTAIDVGHHLLVAHGLSVRRFREL---GTSGQIGIAPNVSWAVPYS 230
Query: 266 NSTEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQ---NVGSRLPAFSDRESKQVKGSAD 322
S ED A R W P+ G YP+ + G+ +P D + + D
Sbjct: 231 TSEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVP-IQDGDMDIIGEPID 289
Query: 323 FLGVINYYIVYV-KDNPSS-------LNKKLR----DWNADSA--------------TEI 356
+G INYY + V + NP + +N L W +S +I
Sbjct: 290 MIG-INYYSMSVNRFNPEAGFLQSEEINMGLPVTDIGWPVESRGLYEVLHYLQKYGNIDI 348
Query: 357 F------CQNTP-RRSSLKDISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFELMD 409
+ C N ++D R+ Y+ ++ V + +G +++GY WS LD FE +
Sbjct: 349 YITENGACINDEVVNGKVQDDRRISYMQQHLVQVHRTIHDGLHVKGYMAWSLLDNFEWAE 408
Query: 410 GYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFLKGRSLSS 449
GY +G+ +VD R PK S +WY + L +
Sbjct: 409 GYNMRFGMIHVDFRTQ--VRTPKESYYWYRNVVSNNWLET 446
>pdb|1NP2|A Chain A, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
pdb|1NP2|B Chain B, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
Length = 436
Score = 225 bits (574), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 152/442 (34%), Positives = 216/442 (48%), Gaps = 60/442 (13%)
Query: 34 FLFGASTSAYQVEGAANEDGRTPSIWDTFAH-AGNVH--GTGDIACDGYHKYKEDVKLMA 90
FL+G +TSAYQ+EGA EDGR PSIWDTFA G + TG+ ACD YH+Y+ED+ LM
Sbjct: 8 FLWGVATSAYQIEGATQEDGRGPSIWDTFARRPGAIRDGSTGEPACDHYHRYEEDIALMQ 67
Query: 91 DTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHFDLPQALE 150
G+ YRFS++W R++P GRG +NPKGL +Y+ L++ L++ GI P +TL+H+DLPQALE
Sbjct: 68 SLGVGVYRFSVAWPRILPEGRGRINPKGLAFYDRLVDRLLAAGITPFLTLYHWDLPQALE 127
Query: 151 DEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPPQRCSSI 210
D GGW +R F YA+ R DRV ++ T+NEP A LG+ G
Sbjct: 128 DR-GGWRSRETAFAFAEYAEAVARALADRVPFFATLNEPWCSAFLGHWTG---------- 176
Query: 211 NHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLLPLTNSTED 270
H + HH+LL H R + +G+ P +
Sbjct: 177 EHAPGLRNLEAALRAAHHLLLGHGLAVEALRAAGARR----VGI---VLNFAPAYGEDPE 229
Query: 271 AI-ATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFSDRESKQVKGSADFLGVINY 329
A+ RY++ + +P++ YP+ Q+ P S R+ + + DFLGV Y
Sbjct: 230 AVDVADRYHNR---YFLDPILGRGYPESPFQDPPP-APILS-RDLEAIARPLDFLGVNYY 284
Query: 330 YIVYVKDN-----------------------PSSLNKKLRDWNADSATEIFCQNT----- 361
V V P L L+ + ++
Sbjct: 285 APVRVAPGTGPLPVRYLPPEGPVTAMGWEVYPEGLYHLLKRLGREVPWPLYITENGAAYP 344
Query: 362 ---PRRSSLKDISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFELMDGYESSYGLY 418
+ ++D RV YL A++ + L A G ++RGYF+WS +D FE GY +GLY
Sbjct: 345 DLWTGEAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFVWSLMDNFEWAFGYTRRFGLY 404
Query: 419 YVDRDDPDLKRYPKLSAHWYSQ 440
YV D P +R PK SA WY +
Sbjct: 405 YV--DFPSQRRIPKRSALWYRE 424
>pdb|3CMJ|A Chain A, Crystal Structure Of Engineered Beta-Glucosidase From Soil
Metagenome
Length = 465
Score = 221 bits (564), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 144/455 (31%), Positives = 210/455 (46%), Gaps = 52/455 (11%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAH-AGNVHG--TGDIACDGYHKYKEDV 86
FP GFL+GA+TS+YQ+EGA NEDG+ SIWD F G + +GD+ACD YH+Y++D+
Sbjct: 26 FPEGFLWGAATSSYQIEGAWNEDGKGESIWDRFTRIPGKIKNGDSGDVACDHYHRYEQDL 85
Query: 87 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHFDLP 146
LM GL YRFSI+W+R+ P+ +N +GL +Y L+ L I P TL+H+DLP
Sbjct: 86 DLMRQLGLKTYRFSIAWARIQPDSSRQINQRGLDFYRRLVEGLHKRDILPMATLYHWDLP 145
Query: 147 QALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPPQR 206
Q +EDE GGW++R F Y GD++ W T NEP GY G+ P
Sbjct: 146 QWVEDE-GGWLSRESASRFAEYTHALVAALGDQIPLWVTHNEPMVTVWAGYHMGLFAP-- 202
Query: 207 CSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLLPLTN 266
+ + G HH+LL+H + +R + +G+ + + P++
Sbjct: 203 --GLKDPTLGGR------VAHHLLLSHGQALQAFRALSPAGSQ--MGITLNFNTIYPVSA 252
Query: 267 STEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFSDRESKQ-VKGSADFLG 325
D A +R + F PL+ G Y + LP F E Q + DFLG
Sbjct: 253 EPADVEAARRMHSFQNELFLEPLIRGQYNQATLMAY-PNLPEFIAPEDMQTISAPIDFLG 311
Query: 326 VINYYIVYVKDNPS-------SLNKKLRDWNADSATE----------------------- 355
V Y + VK +P + + + A E
Sbjct: 312 VNYYNPMRVKSSPQPPGIEVVQVESPVTAMGWEIAPEGLYDLLMGITRTYGKLPIYITEN 371
Query: 356 --IFCQNTPRRSSLKDISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFELMDGYES 413
F + + D RV Y +IG+ A+ +G ++RGY+ WS LD FE +GY
Sbjct: 372 GAAFDDQPDQSGQVNDPQRVGYFQGHIGAARRALADGVDLRGYYAWSLLDNFEWAEGYSK 431
Query: 414 SYGLYYVDRDDPDLKRYPKLSAHWYSQFLKGRSLS 448
+G+ YVD + +R K SA WY + L
Sbjct: 432 RFGIIYVDFETQ--QRTLKQSAQWYRDVIANNGLE 464
>pdb|4HZ6|A Chain A, Crystal Structure Of Bglb
pdb|4HZ7|A Chain A, Crystal Structure Of Bglb With Glucose
pdb|4HZ8|A Chain A, Crystal Structure Of Bglb With Natural Substrate
Length = 444
Score = 221 bits (564), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 144/455 (31%), Positives = 210/455 (46%), Gaps = 52/455 (11%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAH-AGNVHG--TGDIACDGYHKYKEDV 86
FP GFL+GA+TS+YQ+EGA NEDG+ SIWD F G + +GD+ACD YH+Y++D+
Sbjct: 5 FPEGFLWGAATSSYQIEGAWNEDGKGESIWDRFTRIPGKIKNGDSGDVACDHYHRYEQDL 64
Query: 87 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHFDLP 146
LM GL YRFSI+W+R+ P+ +N +GL +Y L+ L I P TL+H+DLP
Sbjct: 65 DLMRQLGLKTYRFSIAWARIQPDSSRQINQRGLDFYRRLVEGLHKRDILPMATLYHWDLP 124
Query: 147 QALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPPQR 206
Q +EDE GGW++R F Y GD++ W T NEP GY G+ P
Sbjct: 125 QWVEDE-GGWLSRESASRFAEYTHALVAALGDQIPLWVTHNEPMVTVWAGYHMGLFAP-- 181
Query: 207 CSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLLPLTN 266
+ + G HH+LL+H + +R + +G+ + + P++
Sbjct: 182 --GLKDPTLGGR------VAHHLLLSHGQALQAFRALSPAGSQ--MGITLNFNTIYPVSA 231
Query: 267 STEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFSDRESKQ-VKGSADFLG 325
D A +R + F PL+ G Y + LP F E Q + DFLG
Sbjct: 232 EPADVEAARRMHSFQNELFLEPLIRGQYNQATLMAY-PNLPEFIAPEDMQTISAPIDFLG 290
Query: 326 VINYYIVYVKDNPS-------SLNKKLRDWNADSATE----------------------- 355
V Y + VK +P + + + A E
Sbjct: 291 VNYYNPMRVKSSPQPPGIEVVQVESPVTAMGWEIAPEGLYDLLMGITRTYGKLPIYITEN 350
Query: 356 --IFCQNTPRRSSLKDISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFELMDGYES 413
F + + D RV Y +IG+ A+ +G ++RGY+ WS LD FE +GY
Sbjct: 351 GAAFDDQPDQSGQVNDPQRVGYFQGHIGAARRALADGVDLRGYYAWSLLDNFEWAEGYSK 410
Query: 414 SYGLYYVDRDDPDLKRYPKLSAHWYSQFLKGRSLS 448
+G+ YVD + +R K SA WY + L
Sbjct: 411 RFGIIYVDFETQ--QRTLKQSAQWYRDVIANNGLE 443
>pdb|1UG6|A Chain A, Structure Of Beta-Glucosidase At Atomic Resolution From
Thermus Thermophilus Hb8
Length = 431
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 153/442 (34%), Positives = 212/442 (47%), Gaps = 60/442 (13%)
Query: 34 FLFGASTSAYQVEGAANEDGRTPSIWDTFAH-AGNVH--GTGDIACDGYHKYKEDVKLMA 90
FL+G +TSAYQ+EGA EDGR PSIWD FA G + TG+ ACD Y +Y+ED+ LM
Sbjct: 8 FLWGVATSAYQIEGATQEDGRGPSIWDAFAQRPGAIRDGSTGEPACDHYRRYEEDIALMQ 67
Query: 91 DTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHFDLPQALE 150
G+ AYRFS++W R++P GRG +NPKGL +Y+ L++ L++ GI P +TL+H+DLP ALE
Sbjct: 68 SLGVRAYRFSVAWPRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLALE 127
Query: 151 DEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPPQRCSSI 210
E GGW +R F YA+ R DRV ++ T+NEP A LG+ G
Sbjct: 128 -ERGGWRSRETAFAFAEYAEAVARALADRVPFFATLNEPWCSAFLGHWTG---------- 176
Query: 211 NHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIF-AFGLLPLTNSTE 269
H + HH+LL H R +R I +N A+G P
Sbjct: 177 EHAPGLRNLEAALRAAHHLLLGHGLAVEALRAA--GARRVGIVLNFAPAYGEDPEAVDVA 234
Query: 270 DAIATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFSDRESKQVKGSADFLGVINY 329
D + + D ++G + D P + P S R+ + V DFLGV Y
Sbjct: 235 DRYHNRFFLDPILGKGYPESPFRDPPPV---------PILS-RDLELVARPLDFLGVNYY 284
Query: 330 YIVYVKDN-----------------------PSSLNKKLRDWNADSATEIFCQNT----- 361
V V P L L+ + ++
Sbjct: 285 APVRVAPGTGTLPVRYLPPEGPATAMGWEVYPEGLYHLLKRLGREVPWPLYVTENGAAYP 344
Query: 362 ---PRRSSLKDISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFELMDGYESSYGLY 418
+ ++D RV YL A++ + L A G ++RGYF+WS +D FE GY +GLY
Sbjct: 345 DLWTGEAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFVWSLMDNFEWAFGYTRRFGLY 404
Query: 419 YVDRDDPDLKRYPKLSAHWYSQ 440
YV D P +R PK SA WY +
Sbjct: 405 YV--DFPSQRRIPKRSALWYRE 424
>pdb|3ZJK|A Chain A, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|B Chain B, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|C Chain C, Crystal Structure Of Ttb-gly F401s Mutant
Length = 431
Score = 219 bits (557), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 153/442 (34%), Positives = 212/442 (47%), Gaps = 60/442 (13%)
Query: 34 FLFGASTSAYQVEGAANEDGRTPSIWDTFAH-AGNVH--GTGDIACDGYHKYKEDVKLMA 90
FL+G +TSAYQ+EGA EDGR PSIWD FA G + TG+ ACD Y +Y+ED+ LM
Sbjct: 8 FLWGVATSAYQIEGATQEDGRGPSIWDAFAQRPGAIRDGSTGEPACDHYRRYEEDIALMQ 67
Query: 91 DTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHFDLPQALE 150
G+ AYRFS++W R++P GRG +NPKGL +Y+ L++ L++ GI P +TL+H+DLP ALE
Sbjct: 68 SLGVRAYRFSVAWPRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLALE 127
Query: 151 DEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPPQRCSSI 210
E GGW +R F YA+ R DRV ++ T+NEP A LG+ G
Sbjct: 128 -ERGGWRSRETAFAFAEYAEAVARALADRVPFFATLNEPWCSAFLGHWTG---------- 176
Query: 211 NHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIF-AFGLLPLTNSTE 269
H + HH+LL H R +R I +N A+G P
Sbjct: 177 EHAPGLRNLEAALRAAHHLLLGHGLAVEALRAA--GARRVGIVLNFAPAYGEDPEAVDVA 234
Query: 270 DAIATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFSDRESKQVKGSADFLGVINY 329
D + + D ++G + D P + P S R+ + V DFLGV Y
Sbjct: 235 DRYHNRFFLDPILGKGYPESPFRDPPPV---------PILS-RDLELVARPLDFLGVNYY 284
Query: 330 YIVYVKDN-----------------------PSSLNKKLRDWNADSATEIFCQNT----- 361
V V P L+ L+ + ++
Sbjct: 285 APVRVAPGTGTLPVRYLPPEGPATAMGWEVYPEGLHHLLKRLGREVPWPLYVTENGAAYP 344
Query: 362 ---PRRSSLKDISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFELMDGYESSYGLY 418
+ ++D RV YL A++ + L A G ++RGYF+WS +D FE GY GLY
Sbjct: 345 DLWTGEAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFVWSLMDNFEWAFGYTRRSGLY 404
Query: 419 YVDRDDPDLKRYPKLSAHWYSQ 440
YV D P +R PK SA WY +
Sbjct: 405 YV--DFPSQRRIPKRSALWYRE 424
>pdb|4F79|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase Mutant
(E375q) In Complex With Salicin 6-Phosphate
pdb|4GPN|A Chain A, The Crystal Structure Of 6-P-Beta-D-Glucosidase (E375q
Mutant) From Streptococcus Mutans Ua150 In Complex With
Gentiobiose 6-Phosphate.
pdb|4GPN|B Chain B, The Crystal Structure Of 6-P-Beta-D-Glucosidase (E375q
Mutant) From Streptococcus Mutans Ua150 In Complex With
Gentiobiose 6-Phosphate
Length = 480
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 150/480 (31%), Positives = 221/480 (46%), Gaps = 80/480 (16%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAH----------AGNVHGT---GDIAC 76
P FL+G + +A+Q+EG E G+ S+ D AG + G A
Sbjct: 7 LPENFLWGGAVAAHQLEGGWQEGGKGISVADVMTAGRHGVAREITAGVLEGKYYPNHEAI 66
Query: 77 DGYHKYKEDVKLMADTGLDAYRFSISWSRLIPNG-RGPVNPKGLQYYNNLINELISYGIQ 135
D YH YKEDVKL A+ G +R SI+W+R+ P G N GLQ+Y++L +E + YGI+
Sbjct: 67 DFYHHYKEDVKLFAEMGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGIE 126
Query: 136 PHVTLHHFDLPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANL 195
P VTL HF+LP L EYGG+ NR ++ F +A+VCFR++ D+V YW T NE N AN
Sbjct: 127 PVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWMTFNEINNQANY 186
Query: 196 GYDYGIAPPQRCSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVN 255
D+ P S I + + Y H+ L+A A ++ + IG
Sbjct: 187 QEDFA---PFTNSGIVYKEGDDREAIMYQAAHYELVASARAVKIGHAINPNLN---IGCM 240
Query: 256 IFAFGLLPLTNSTEDAIATQ-----RYYDFLIGWMANPLVYGDYPK-IMKQNVGSRLPA- 308
+ + P T + +D + Q RYY A+ V+G YP+ I K +
Sbjct: 241 VAMCPIYPATCNPKDILMAQKAMQKRYY------FADVHVHGFYPEHIFKYWERKAIKVD 294
Query: 309 FSDRESKQV-KGSADFLGVINYYIVYVKD-----NP-------SSLNK----KLRDWNAD 351
F++R+ K + +G+ D++G +YY+ +V D NP L K K DW+
Sbjct: 295 FTERDKKDLFEGTVDYIG-FSYYMSFVIDAHRENNPYYDYLETEDLVKNPYVKASDWDWQ 353
Query: 352 SATE-----------------IFCQN-------TPRRSSLKDISRVKYLHAYIGSVLDAV 387
+ QN + D R+ YL A+I ++ AV
Sbjct: 354 IDPQGLRYALNWFTDMYHLPLFIVQNGFGAIDQVEADGMVHDDYRIDYLGAHIKEMIKAV 413
Query: 388 -RNGSNIRGYFMWSFLDVFELMDG-YESSYGLYYVDRDDP---DLKRYPKLSAHWYSQFL 442
+G + GY W +D+ G YG YVD+DD LKR PKLS +WY + +
Sbjct: 414 DEDGVELMGYTPWGCIDLVSAGTGEMRKRYGFIYVDKDDEGKGTLKRSPKLSFNWYKEVI 473
>pdb|4F66|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159 In Complex With
Beta-D-Glucose-6-Phosphate.
pdb|4F66|B Chain B, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159 In Complex With
Beta-D-Glucose-6-Phosphate
Length = 480
Score = 184 bits (468), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 147/480 (30%), Positives = 218/480 (45%), Gaps = 80/480 (16%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAH----------AGNVHGT---GDIAC 76
P FL+G + +A+Q+EG E G+ S+ D AG + G A
Sbjct: 7 LPENFLWGGAVAAHQLEGGWQEGGKGISVADVMTAGRHGVAREITAGVLEGKYYPNHEAI 66
Query: 77 DGYHKYKEDVKLMADTGLDAYRFSISWSRLIPNG-RGPVNPKGLQYYNNLINELISYGIQ 135
D YH YKEDVKL A+ G +R SI+W+R+ P G N GLQ+Y++L +E + YGI+
Sbjct: 67 DFYHHYKEDVKLFAEMGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGIE 126
Query: 136 PHVTLHHFDLPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANL 195
P VTL HF+LP L EYGG+ NR ++ F +A+VCFR++ D+V YW T NE N AN
Sbjct: 127 PVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWMTFNEINNQANY 186
Query: 196 GYDYGIAPPQRCSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVN 255
D+ P S I + + Y H+ L+A A ++ + IG
Sbjct: 187 QEDFA---PFTNSGIVYKEGDDREAIMYQAAHYELVASARAVKIGHAINPNLN---IGCM 240
Query: 256 IFAFGLLPLTNSTEDAIATQ-----RYYDFLIGWMANPLVYGDYPK-IMKQNVGSRLPA- 308
+ + P T + +D + Q RYY A+ V+G YP+ I K +
Sbjct: 241 VAMCPIYPATCNPKDILMAQKAMQKRYY------FADVHVHGFYPEHIFKYWERKAIKVD 294
Query: 309 FSDRESKQV-KGSADFLGVINYYIVYVKD-----NP-------------SSLNKKLRDWN 349
F++R+ K + +G+ D++G +YY+ +V D NP + DW
Sbjct: 295 FTERDKKDLFEGTVDYIG-FSYYMSFVIDAHRENNPYYDYLETEDLVKNPYVKASDWDWQ 353
Query: 350 ADSATEIFCQN----------------------TPRRSSLKDISRVKYLHAYIGSVLDAV 387
D + N + D R+ YL A+I ++ AV
Sbjct: 354 IDPQGLRYALNWFTDMYHLPLFIVENGFGAIDQVEADGMVHDDYRIDYLGAHIKEMIKAV 413
Query: 388 -RNGSNIRGYFMWSFLDVFELMDG-YESSYGLYYVDRDDP---DLKRYPKLSAHWYSQFL 442
+G + GY W +D+ G YG YVD+DD LKR PKLS +WY + +
Sbjct: 414 DEDGVELMGYTPWGCIDLVSAGTGEMRKRYGFIYVDKDDEGKGTLKRSPKLSFNWYKEVI 473
>pdb|3PN8|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159
pdb|3PN8|B Chain B, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159
Length = 480
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 147/480 (30%), Positives = 216/480 (45%), Gaps = 80/480 (16%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAH----------AGNVHGT---GDIAC 76
P FL+G + +A+Q+EG E G+ S+ D AG + G A
Sbjct: 7 LPENFLWGGAVAAHQLEGGWQEGGKGISVADVXTAGRHGVAREITAGVLEGKYYPNHEAI 66
Query: 77 DGYHKYKEDVKLMADTGLDAYRFSISWSRLIPNG-RGPVNPKGLQYYNNLINELISYGIQ 135
D YH YKEDVKL A+ G +R SI+W+R+ P G N GLQ+Y++L +E + YGI+
Sbjct: 67 DFYHHYKEDVKLFAEXGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGIE 126
Query: 136 PHVTLHHFDLPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANL 195
P VTL HF+LP L EYGG+ NR ++ F +A+VCFR++ D+V YW T NE N AN
Sbjct: 127 PVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWXTFNEINNQANY 186
Query: 196 GYDYGIAPPQRCSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVN 255
D+ P S I + + Y H+ L+A A ++ + IG
Sbjct: 187 QEDFA---PFTNSGIVYKEGDDREAIXYQAAHYELVASARAVKIGHAINPNLN---IGCX 240
Query: 256 IFAFGLLPLTNSTEDAIATQ-----RYYDFLIGWMANPLVYGDYPK-IMKQNVGSRLPA- 308
+ + P T + +D + Q RYY A+ V+G YP+ I K +
Sbjct: 241 VAXCPIYPATCNPKDILXAQKAXQKRYY------FADVHVHGFYPEHIFKYWERKAIKVD 294
Query: 309 FSDRESKQV-KGSADFLGVINYYIVYVKD-----NP-------------SSLNKKLRDWN 349
F++R+ K + +G+ D++G +YY +V D NP + DW
Sbjct: 295 FTERDKKDLFEGTVDYIG-FSYYXSFVIDAHRENNPYYDYLETEDLVKNPYVKASDWDWQ 353
Query: 350 ADSATEIFCQN----------------------TPRRSSLKDISRVKYLHAYIGSVLDAV 387
D + N + D R+ YL A+I + AV
Sbjct: 354 IDPQGLRYALNWFTDXYHLPLFIVENGFGAIDQVEADGXVHDDYRIDYLGAHIKEXIKAV 413
Query: 388 -RNGSNIRGYFMWSFLDVFELMDG-YESSYGLYYVDRDDP---DLKRYPKLSAHWYSQFL 442
+G + GY W +D+ G YG YVD+DD LKR PKLS +WY + +
Sbjct: 414 DEDGVELXGYTPWGCIDLVSAGTGEXRKRYGFIYVDKDDEGKGTLKRSPKLSFNWYKEVI 473
>pdb|3QOM|A Chain A, Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Lactobacillus Plantarum
pdb|4GZE|A Chain A, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|B Chain B, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|C Chain C, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|D Chain D, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|E Chain E, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|F Chain F, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
Length = 481
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 138/470 (29%), Positives = 203/470 (43%), Gaps = 64/470 (13%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHAGN----------VHGT---GDIAC 76
FP GFL+G + +A+Q+EG E G+ S D N V G A
Sbjct: 11 FPEGFLWGGAVAAHQLEGGYKEGGKGLSTADIXTLGTNERPREITDGVVAGKYYPNHQAI 70
Query: 77 DGYHKYKEDVKLMADTGLDAYRFSISWSRLIPNG-RGPVNPKGLQYYNNLINELISYGIQ 135
D YH+Y ED++L A+ G +R SI+W+R+ PNG N GLQ+Y++L +E + GIQ
Sbjct: 71 DFYHRYPEDIELFAEXGFKCFRTSIAWTRIFPNGDESEPNEAGLQFYDDLFDECLKNGIQ 130
Query: 136 PHVTLHHFDLPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANL 195
P VTL HF+ P L +YGGW NR +++ + +A VCF ++ D+V+YW T NE N N
Sbjct: 131 PVVTLAHFEXPYHLVKQYGGWRNRKLIQFYLNFAKVCFERYRDKVTYWXTFNEINNQTNF 190
Query: 196 GYDYGIAPPQRCSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVN 255
D S I H N Y H+ L+A A+ +L + D Q IG
Sbjct: 191 ESDGAXLTD---SGIIHQPGENRERWXYQAAHYELVASAAAVQLGHQINPDFQ---IGCX 244
Query: 256 IFAFGLLPLTNSTEDAIATQRYYDFLIGWMANPLVYGDYPKIMKQNVGSR---LPAFSDR 312
I + PLT + D + QR + A+ G YP+ ++ S L ++
Sbjct: 245 IAXCPIYPLTAAPADVLFAQRAXQTRF-YFADVHCNGTYPQWLRNRFESEHFNLDITAED 303
Query: 313 ESKQVKGSADFLGVINYYIVYVKDNPSSLNKKLRD-------------WNADSATEIFCQ 359
G+ D++G Y VKD + D W D +
Sbjct: 304 LKILQAGTVDYIGFSYYXSFTVKDTGKLAYNEEHDLVKNPYVKASDWGWQVDPVGLRYAX 363
Query: 360 N--TPR--------------------RSSLKDISRVKYLHAYIGSV-LDAVRNGSNIRGY 396
N T R + + D R+ YL ++ + L + +G ++ GY
Sbjct: 364 NWFTDRYHLPLFIVENGLGAIDKKTADNQIHDDYRIDYLTDHLRQIKLAVLEDGVDLIGY 423
Query: 397 FMWSFLDVFELMDGYESS-YGLYYVDRDDP---DLKRYPKLSAHWYSQFL 442
W +D+ G S YG YVD +D LKRY K S W+ +
Sbjct: 424 TPWGCIDLVAASTGQXSKRYGFIYVDENDDGSGSLKRYKKDSFTWFQHVI 473
>pdb|1PBG|A Chain A, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|1PBG|B Chain B, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|3PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-C
pdb|3PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-C
Length = 468
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 124/225 (55%), Gaps = 15/225 (6%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHAGNVHGTGDIACDGYHKYKEDVKLM 89
P F+FG +T+AYQ EGA + DG+ P WD + N T + A D YHKY D++L
Sbjct: 5 LPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLE-DNYWYTAEPASDFYHKYPVDLELA 63
Query: 90 ADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHFDLPQAL 149
+ G++ R SI+WSR+ P G G VN KG+++Y+ L E ++P VTLHHFD P+AL
Sbjct: 64 EEYGVNGIRISIAWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEAL 123
Query: 150 EDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPPQRCSS 209
G ++NR ++ F YA CF +F + V+YWTT NE + Y G PP
Sbjct: 124 HSN-GDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKFPPGIKYD 181
Query: 210 INHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGV 254
+ + + H+++++HA +LY+ K +G IGV
Sbjct: 182 LAKVFQSH---------HNMMVSHARAVKLYKDK---GYKGEIGV 214
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
Query: 365 SSLKDISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFELMDGYESSYGLYYVDRDD 424
+++ D R+ Y+ ++ + DA+ +G+N++GYF+WS +DVF +GYE YGL+YVD D
Sbjct: 387 NTVYDDGRIDYVKQHLEVLSDAIADGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFDT 446
Query: 425 PDLKRYPKLSAHWYSQFLKGRSLS 448
+ RYPK SAHWY + + + +
Sbjct: 447 QE--RYPKKSAHWYKKLAETQVIE 468
>pdb|2PBG|A Chain A, 6-Phospho-Beta-D-Galactosidase Form-B
Length = 468
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 124/225 (55%), Gaps = 15/225 (6%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHAGNVHGTGDIACDGYHKYKEDVKLM 89
P F+FG +T+AYQ EGA + DG+ P WD + N T + A D YHKY D++L
Sbjct: 5 LPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLE-DNYWYTAEPASDFYHKYPVDLELA 63
Query: 90 ADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHFDLPQAL 149
+ G++ R SI+WSR+ P G G VN KG+++Y+ L E ++P VTLHHFD P+AL
Sbjct: 64 EEYGVNGIRISIAWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEAL 123
Query: 150 EDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPPQRCSS 209
G ++NR ++ F YA CF +F + V+YWTT NE + Y G PP
Sbjct: 124 HSN-GDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKFPPGIKYD 181
Query: 210 INHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGV 254
+ + + H+++++HA +LY+ K +G IGV
Sbjct: 182 LAKVFQSH---------HNMMVSHARAVKLYKDK---GYKGEIGV 214
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
Query: 365 SSLKDISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFELMDGYESSYGLYYVDRDD 424
+++ D R+ Y+ ++ + DA+ +G+N++GYF+WS +DVF +GYE YGL+YVD D
Sbjct: 387 NTVYDDGRIDYVKQHLEVLSDAIADGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFDT 446
Query: 425 PDLKRYPKLSAHWYSQFLKGRSLS 448
+ RYPK SAHWY + + + +
Sbjct: 447 QE--RYPKKSAHWYKKLAETQVIE 468
>pdb|4B3K|A Chain A, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|B Chain B, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|C Chain C, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|D Chain D, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|E Chain E, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|F Chain F, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|A Chain A, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|B Chain B, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|C Chain C, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|D Chain D, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|E Chain E, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|F Chain F, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
Length = 479
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/484 (26%), Positives = 205/484 (42%), Gaps = 83/484 (17%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRT---------PSIWDTFAHAGNVHGTGDIACDGYH 80
FP F +G +TS Q EG + R P ++ + D A D YH
Sbjct: 3 FPKEFWWGGATSGPQSEGRFAKQHRNLFDYWYEEEPDLFYDYV-------GPDTASDAYH 55
Query: 81 KYKEDVKLMADTGLDAYRFSISWSRLIPN-GRGPVNPKGLQYYNNLINELISYGIQPHVT 139
+ + D+ L+A G ++YR SI W+RLI + + +NP GL YYN +I+ ++ GI+P +
Sbjct: 56 QIESDLTLLASLGHNSYRTSIQWTRLIDDFEQATINPDGLAYYNRVIDACLANGIRPVIN 115
Query: 140 LHHFDLPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDY 199
LHHFDLP AL YGGW ++ +V F A++ VCF QFGDRV W NEP Y
Sbjct: 116 LHHFDLPIALYQAYGGWESKHVVDLFVAFSKVCFEQFGDRVKDWFVHNEPMVVVEGSYLM 175
Query: 200 GIAPPQRCSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAF 259
P G + + +++ LA A V + YR+ + G IG +
Sbjct: 176 QFHYPAIVD-------GKKAVQ---VAYNLALATAKVIQAYRRGPAELSDGRIGTILNLT 225
Query: 260 GLLPLTNSTEDAIATQRYYDFLIGWMANPLVYGDYPK----IMKQNVGSRLPAFSDRESK 315
P + S D A + V+G +P+ ++K++ G + + +
Sbjct: 226 PAYPASQSEADMAAAHFAELWNNDLFMEAAVHGKFPEELVAVLKKD-GVLWQSTPEELAL 284
Query: 316 QVKGSADFLGVINYYIVYVKDNPSSLNKKLRDW----------------NADSATEIFCQ 359
+ D+LG+ Y+ VK P ++ W N D EI+ +
Sbjct: 285 IAENRVDYLGLNFYHPKRVK-APDAIPVISPSWSPEWYYDPYLMPGRRMNVDKGWEIYPE 343
Query: 360 --------------NTP------------------RRSSLKDISRVKYLHAYIGSVLDAV 387
N P ++D R+++L ++ + +
Sbjct: 344 AVYDIAIKMRDHYDNIPWFLSENGVGISGEDRYRDETGQIQDDYRIQFLKEHLTYLHKGI 403
Query: 388 RNGSNIRGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFLKGRSL 447
GSN GY +W+ +D + ++ Y++ YGL V+ + R PK SA+W+ + L
Sbjct: 404 EAGSNCFGYHVWTPIDGWSWLNAYKNRYGL--VENNIHTQVRRPKASAYWFKKVATHNRL 461
Query: 448 SSDE 451
S E
Sbjct: 462 ISLE 465
>pdb|4PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-Cst
pdb|4PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-Cst
Length = 468
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 124/225 (55%), Gaps = 15/225 (6%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHAGNVHGTGDIACDGYHKYKEDVKLM 89
P F+FG +T+AYQ EGA + DG+ P WD + N T + A D YHKY D++L
Sbjct: 5 LPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLE-DNYWYTAEPASDFYHKYPVDLELA 63
Query: 90 ADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHFDLPQAL 149
+ G++ R SI+WSR+ P G G VN KG+++Y+ L E ++P VTLHHFD P+AL
Sbjct: 64 EEYGVNGIRISIAWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEAL 123
Query: 150 EDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPPQRCSS 209
G ++NR ++ F YA CF +F + V+YWTT NE + Y G PP
Sbjct: 124 HSN-GDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKFPPGIKYD 181
Query: 210 INHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGV 254
+ + + H+++++HA +LY+ K +G IGV
Sbjct: 182 LAKVFQSH---------HNMMVSHARAVKLYKDK---GYKGEIGV 214
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 67/118 (56%), Gaps = 7/118 (5%)
Query: 331 IVYVKDNPSSLNKKLRDWNADSATEIFCQNTPRRSSLKDISRVKYLHAYIGSVLDAVRNG 390
I+ VK++ + K N + F NT + D R+ Y+ ++ + DA+ +G
Sbjct: 358 IMRVKNDYPNYKKIYITCNGLGYKDEFVDNT-----VYDDGRIDYVKQHLEVLSDAIADG 412
Query: 391 SNIRGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSAHWYSQFLKGRSLS 448
+N++GYF+WS +DVF +GYE YGL+YVD D + RYPK SAHWY + + + +
Sbjct: 413 ANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFDTQE--RYPKKSAHWYKKLAETQVIE 468
>pdb|2XHY|A Chain A, Crystal Structure Of E.Coli Bgla
pdb|2XHY|B Chain B, Crystal Structure Of E.Coli Bgla
pdb|2XHY|C Chain C, Crystal Structure Of E.Coli Bgla
pdb|2XHY|D Chain D, Crystal Structure Of E.Coli Bgla
Length = 479
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 134/272 (49%), Gaps = 34/272 (12%)
Query: 26 SKNDFPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHAGNVHG-----TGDI------ 74
K P FL+G + +A+QVEG N+ G+ PSI D G HG T ++
Sbjct: 4 KKLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLT--GGAHGVPREITKEVLPGKYY 61
Query: 75 ----ACDGYHKYKEDVKLMADTGLDAYRFSISWSRLIPNG-RGPVNPKGLQYYNNLINEL 129
A D Y YKED+KL A+ G +R SI+W+R+ P G N +GL++Y+++ +EL
Sbjct: 62 PNHEAVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDEL 121
Query: 130 ISYGIQPHVTLHHFDLPQALEDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEP 189
+ Y I+P +TL HF++P L +YG W NR +V F +A+V F ++ +V YW T NE
Sbjct: 122 LKYNIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRFAEVVFERYKHKVKYWMTFNEI 181
Query: 190 NAFAN-----LGYDYGIAPPQRCSSINHCSRGNSSTEPYITVHHVLLAHASVARLYRKKY 244
N N GY CS + + N Y +HH +A A + R+
Sbjct: 182 NNQRNWRAPLFGY--------CCSGVVYTEHENPEETMYQVLHHQFVASALAVKAARRIN 233
Query: 245 QDKQRGYIGVNIFAFGLLPLTNSTEDAIATQR 276
+ + +G + L P + + +D + Q
Sbjct: 234 PEMK---VGCMLAMVPLYPYSCNPDDVMFAQE 262
>pdb|1VFF|A Chain A, Beta-Glycosidase From Pyrococcus Horikoshii
Length = 423
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 192/448 (42%), Gaps = 68/448 (15%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAHAGNVHGTGDIACDGYHKYKEDVKLM 89
FP FLFG +TS++Q+EG + W + G + AC+ + Y++D++LM
Sbjct: 5 FPEMFLFGTATSSHQIEGNNRWND-----WWYYEQIGKLPYRSGKACNHWELYRDDIQLM 59
Query: 90 ADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHFDLPQAL 149
G +AYRFSI WSRL P N Y +I+ L++ GI P VTLHHF P
Sbjct: 60 TSLGYNAYRFSIEWSRLFPE-ENKFNEDAFMKYREIIDLLLTRGITPLVTLHHFTSPLWF 118
Query: 150 EDEYGGWINRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDYGIAPPQRCSS 209
+ GG++ +K + Y + + ++V T NEP + +GY PP
Sbjct: 119 MKK-GGFLREENLKHWEKYIEKV-AELLEKVKLVATFNEPMVYVMMGYLTAYWPP----- 171
Query: 210 INHCSRGNSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLLPLTNSTE 269
S + + ++L AHA L K++ +G+ +LP ++
Sbjct: 172 -----FIRSPFKAFKVAANLLKAHAIAYELLHGKFK------VGIVKNIPIILPASDKER 220
Query: 270 DAIATQRYYDFLIGW-MANPLVYGDYPKIMKQNVGSRLPAFSDRESKQVKGSADFLGVIN 328
D A ++ D L W + + G Y + K R+P + ADF+GV N
Sbjct: 221 DRKAAEK-ADNLFNWHFLDAIWSGKYRGVFKT---YRIP----------QSDADFIGV-N 265
Query: 329 YY--------------IVYVKDNPSSLNKKLRDWNADSATEIFCQNTPRR---------- 364
YY VK S K W+ R
Sbjct: 266 YYTASEVRHTWNPLKFFFEVKLADISERKTQMGWSVYPKGIYMALKKASRYGRPLYITEN 325
Query: 365 --SSLKDISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFELMDGYESSYGLYYVDR 422
++L D RV+++ ++ V A+ +G ++RGYF WSF+D +E +G+ +GL V+
Sbjct: 326 GIATLDDEWRVEFIIQHLQYVHKAIEDGLDVRGYFYWSFMDNYEWKEGFGPRFGL--VEV 383
Query: 423 DDPDLKRYPKLSAHWYSQFLKGRSLSSD 450
D +R P+ SA+ Y + + + + +
Sbjct: 384 DYQTFERRPRKSAYVYGEIARSKEIKDE 411
>pdb|3APG|A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|B Chain B, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|C Chain C, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|D Chain D, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
Length = 473
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 188/477 (39%), Gaps = 106/477 (22%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAH-AGNVHG---TGDIACDG---YHKY 82
FP F+FG S S +Q E S W + H N+ +GD+ +G +H Y
Sbjct: 4 FPKNFMFGYSWSGFQFEMGL-PGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLY 62
Query: 83 KEDVKLMADTGLDAYRFSISWSRLIPNGRGPV---------------------------- 114
K+D + G+D R I W+R+ P V
Sbjct: 63 KQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKI 122
Query: 115 -NPKGLQYYNNLINELISYGIQPHVTLHHFDLPQALEDEYG-----------GWINRTIV 162
N + L++Y + ++ G + L+H+ LP + D GW++ V
Sbjct: 123 ANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTV 182
Query: 163 KDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGY---DYGIAPPQRCSSINHCSRGNSS 219
+F +A D V W+T+NEPN N GY G P + S +
Sbjct: 183 VEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPP-------GYLSFEAAE 235
Query: 220 TEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLL-PLTNSTEDAIATQRY- 277
+ + + A+ ++ K+Y +K G I +AF PL +D + R
Sbjct: 236 KAKFNLIQAHIGAYDAI-----KEYSEKSVGVI----YAFAWHDPLAEEYKDEVEEIRKK 286
Query: 278 -YDFL--------IGWMA----NPLVYGDYPKIMKQNVGSRLPAF---SDRE--SKQVKG 319
Y+F+ + W+ + LVYG K LP + S+R +K +
Sbjct: 287 DYEFVTILHSKGKLDWIGVNYYSRLVYG-----AKDGHLVPLPGYGFMSERGGFAKSGRP 341
Query: 320 SADFLGVINYYIVYVKDNPSSLNKKLRDWN-ADSATEIFCQNTPRRSSLKDISRVKYLHA 378
++DF G Y P L L+ N A I +N + D R YL +
Sbjct: 342 ASDF-GWEMY--------PEGLENLLKYLNNAYELPMIITENG--MADAADRYRPHYLVS 390
Query: 379 YIGSVLDAVRNGSNIRGYFMWSFLDVFELMDGYESSYGLYYVDRDDPDLKRYPKLSA 435
++ +V +A++ G+++RGY WS D +E G+ +GL YVD + KRY + SA
Sbjct: 391 HLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETK--KRYLRPSA 445
>pdb|4HA3|A Chain A, Structure Of Beta-Glycosidase From Acidilobus
Saccharovorans In Complex With Tris
pdb|4HA4|A Chain A, Structure Of Beta-Glycosidase From Acidilobus
Saccharovorans In Complex With Glycerol
Length = 489
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 118/527 (22%), Positives = 194/527 (36%), Gaps = 132/527 (25%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAH------AGNVHGTGDIACDG----- 78
FP FLFG S + +Q E S W + H AG V +GD +G
Sbjct: 4 FPKDFLFGWSQAGFQSEMGTPGSEDPNSDWYAWVHDRENIAAGLV--SGDFPENGPGYWG 61
Query: 79 -YHKYKEDVKLMADTGLDAYRFSISWSRLIPNGRGPV----------------------- 114
Y K+ + + M GL A R + WSR+ P V
Sbjct: 62 NYRKFHDAAQAM---GLTAARIGVEWSRIFPRPTFDVKVDAEVKGDDVLSVYVSEGALEQ 118
Query: 115 -----NPKGLQYYNNLINELISYGIQPHVTLHHFDLPQALEDEYG----------GWINR 159
N + +Y + ++L S GI + L+H+ LP L D GW++
Sbjct: 119 LDKMANRDAINHYREMFSDLRSRGITFILNLYHWPLPLWLHDPIAIRRGNLSAPSGWLDV 178
Query: 160 TIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGY---DYGIAPPQRCSSINHCSRG 216
V +F ++ + D V ++T+NEPN LGY G P C C+
Sbjct: 179 RTVIEFAKFSAYVAWKLDDLVYMYSTMNEPNVVWGLGYAAVKSGFPPGYLCLE---CA-- 233
Query: 217 NSSTEPYITVHHVLLAHASVARLYRKKYQDKQRGYIGVNIFAFGLLPLTNSTEDAIATQR 276
+ + + H A+ +V + +K +GV PLT++ +A +
Sbjct: 234 GRAMKNLVQAH--ARAYDAVKAITKKP--------VGVIYANSDFTPLTDADREAAERAK 283
Query: 277 YYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFSDRESKQVKGSADFLGVINYY---IVY 333
+ + + + +++ +G S R+ +KG D++GV NYY +V
Sbjct: 284 FDN----------RWAFFDAVVRGQLGG-----STRD--DLKGRLDWIGV-NYYTRQVVR 325
Query: 334 VKDN--------------------------------PSSLNKKLRD-WNADSATEIFCQN 360
+ + P L L++ W+ + +N
Sbjct: 326 ARGSGYEIVPGYGHGCEPNGVSPAGRPCSDFGWEFYPEGLYNVLKEYWDRYHLPLLVTEN 385
Query: 361 TPRRSSLKDISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFELMDGYESSYGLYYV 420
+ D R YL +++ V A+++G N+ GY WS D +E G+ +GL V
Sbjct: 386 GI--ADEGDYQRPYYLVSHVYQVHRALQDGVNVIGYLHWSLADNYEWASGFSKRFGLLMV 443
Query: 421 DRDDPDLKRYPKLSAHWYSQFLKGRSLSSD-EDFALEKNFSGPSYGH 466
D L P SA Y + K R+++ + E G S GH
Sbjct: 444 DYSTKRLHWRP--SAFIYREIAKSRAITDEIEHLNSVPPLRGLSPGH 488
>pdb|1QVB|A Chain A, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
pdb|1QVB|B Chain B, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
Length = 481
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 114/497 (22%), Positives = 180/497 (36%), Gaps = 132/497 (26%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAH------AGNVHGTGDIACDGYHKYK 83
FP F+ G S+S +Q E S W + H AG V G GY
Sbjct: 3 FPKDFMIGYSSSPFQFEAGIPGSEDPNSDWWVWVHDPENTAAGLVSGDFPENGPGYWNLN 62
Query: 84 E-DVKLMADTGLDAYRFSISWSRLIP----NGRGPV------------------------ 114
+ D L G++ R + WSR+ P N + PV
Sbjct: 63 QNDHDLAEKLGVNTIRVGVEWSRIFPKPTFNVKVPVERDENGSIVHVDVDDKAVERLDEL 122
Query: 115 -NPKGLQYYNNLINELISYGIQPHVTLHHFDLPQALEDEY-----------GGWINRTIV 162
N + + +Y + + + G + + L+H+ LP L + GW+N V
Sbjct: 123 ANKEAVNHYVEMYKDWVERGRKLILNLYHWPLPLWLHNPIMVRRMGPDRAPSGWLNEESV 182
Query: 163 KDFTAYADVCFRQFGDRVSYWTTVNEPNAFANLGYDY--GIAPPQRCSSINHCSRGNSST 220
+F YA + G+ W+T+NEPN GY + G PP S + +
Sbjct: 183 VEFAKYAAYIAWKMGELPVMWSTMNEPNVVYEQGYMFVKGGFPPGYLS----LEAADKAR 238
Query: 221 EPYITVHHVLLAHASVARLYR--KKYQDKQRGYIGVNIFAFGLLPLTNSTEDAI----AT 274
I H AR Y K++ K G I+AF L + ++
Sbjct: 239 RNMIQAH---------ARAYDNIKRFSKKPVGL----IYAFQWFELLEGPAEVFDKFKSS 285
Query: 275 QRYYDFLIGWMANPLVYGDYPKIMKQNVGSRLPAFSDRESKQVKGSADFLGVINYY--IV 332
+ YY I + ++ +Y ++++ +RL D+LGV NYY +V
Sbjct: 286 KLYYFTDIVSKGSSIINVEY----RRDLANRL---------------DWLGV-NYYSRLV 325
Query: 333 Y--VKDNPSSLN-----------KKLRDWNADSATEIFCQNTPRRSSLKDI--------- 370
Y V D P L+ + +D E++ + LK++
Sbjct: 326 YKIVDDKPIILHGYGFLCTPGGISPAENPCSDFGWEVYPEGL--YLLLKELYNRYGVDLI 383
Query: 371 --------SRVKYLHAYIGSVLDAVRNGSN----IRGYFMWSFLDVFELMDGYESSYGLY 418
SR AY+ S + +V +N ++GY WS D +E G+ +GL
Sbjct: 384 VTENGVSDSRDALRPAYLVSHVYSVWKAANEGIPVKGYLHWSLTDNYEWAQGFRQKFGLV 443
Query: 419 YVDRDDPDLKRYPKLSA 435
VD KRY + SA
Sbjct: 444 MVDFKTK--KRYLRPSA 458
>pdb|1UWQ|A Chain A, Structure Of Beta-glycosidase From Sulfolobus Solfataricus
pdb|1UWQ|B Chain B, Structure Of Beta-glycosidase From Sulfolobus Solfataricus
pdb|1UWR|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Galactose
pdb|1UWR|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Galactose
pdb|1UWS|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Glucose
pdb|1UWS|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Glucose
pdb|1UWT|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Galactohydroximo-1,5-Lactam
pdb|1UWT|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Galactohydroximo-1,5-Lactam
pdb|1UWU|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Glucohydroximo-1,5-Lactam
pdb|1UWU|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Glucohydroximo-1,5-Lactam
pdb|2CEQ|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Glucoimidazole
pdb|2CEQ|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Glucoimidazole
pdb|2CER|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Phenethyl-Substituted Glucoimidazole
pdb|2CER|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Phenethyl-Substituted Glucoimidazole
Length = 489
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 82/215 (38%), Gaps = 60/215 (27%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAH------AGNVHGTGDIACDG----- 78
FP F FG S + +Q E + W + H AG V +GD+ +G
Sbjct: 4 FPNSFRFGWSQAGFQSEMGTPGSEDPNTDWYKWVHDPENMAAGLV--SGDLPENGPGYWG 61
Query: 79 -YHKYKEDVKLMADTGLDAYRFSISWSRLIPNGRGPV----------------------- 114
Y + ++ + M GL R ++ WSR+ PN P+
Sbjct: 62 NYKTFHDNAQKM---GLKIARLNVEWSRIFPN---PLPRPQNFDESKQDVTEVEINENEL 115
Query: 115 -------NPKGLQYYNNLINELISYGIQPHVTLHHFDLPQALEDEY----------GGWI 157
N L +Y + +L S G+ + ++H+ LP L D GW+
Sbjct: 116 KRLDEYANKDALNHYREIFKDLKSRGLYFILNMYHWPLPLWLHDPIRVRRGDFTGPSGWL 175
Query: 158 NRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAF 192
+ V +F ++ +F D V ++T+NEPN
Sbjct: 176 STRTVYEFARFSAYIAWKFDDLVDEYSTMNEPNVV 210
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 369 DISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFELMDGYESSYGLYYVD 421
D R YL +++ V A+ +G+++RGY WS D +E G+ +GL VD
Sbjct: 395 DYQRPYYLVSHVYQVHRAINSGADVRGYLHWSLADNYEWASGFSMRFGLLKVD 447
>pdb|4EAM|A Chain A, 1.70a Resolution Structure Of Apo Beta-Glycosidase (W33g)
From Sulfolobus Solfataricus
pdb|4EAM|B Chain B, 1.70a Resolution Structure Of Apo Beta-Glycosidase (W33g)
From Sulfolobus Solfataricus
pdb|4EAN|A Chain A, 1.75a Resolution Structure Of Indole Bound
Beta-Glycosidase (W33g) From Sulfolobus Solfataricus
pdb|4EAN|B Chain B, 1.75a Resolution Structure Of Indole Bound
Beta-Glycosidase (W33g) From Sulfolobus Solfataricus
Length = 489
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 78/213 (36%), Gaps = 56/213 (26%)
Query: 30 FPPGFLFGASTSAYQVEGAA------NEDG----RTPSIWDTFAHAGNVHGTGDIACDGY 79
FP F FG S + +Q E N DG P +G++ G Y
Sbjct: 4 FPNSFRFGWSQAGFQSEMGTPGSEDPNTDGYKWVHDPENMAAGLVSGDLPENGPGYWGNY 63
Query: 80 HKYKEDVKLMADTGLDAYRFSISWSRLIPNGRGPV------------------------- 114
+ ++ + M GL R ++ WSR+ PN P+
Sbjct: 64 KTFHDNAQKM---GLKIARLNVEWSRIFPN---PLPRPQNFDESKQDVTEVEINENELKR 117
Query: 115 -----NPKGLQYYNNLINELISYGIQPHVTLHHFDLPQALEDEY----------GGWINR 159
N L +Y + +L S G+ + ++H+ LP L D GW++
Sbjct: 118 LDEYANKDALNHYREIFKDLKSRGLYFILNMYHWPLPLWLHDPIRVRRGDFTGPSGWLST 177
Query: 160 TIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAF 192
V +F ++ +F D V ++T+NEPN
Sbjct: 178 RTVYEFARFSAYIAWKFDDLVDEYSTMNEPNVV 210
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 369 DISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFELMDGYESSYGLYYVD 421
D R YL +++ V A+ +G+++RGY WS D +E G+ +GL VD
Sbjct: 395 DYQRPYYLVSHVYQVHRAINSGADVRGYLHWSLADNYEWASGFSMRFGLLKVD 447
>pdb|1UWI|A Chain A, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|B Chain B, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|C Chain C, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|D Chain D, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
Length = 489
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 76/212 (35%), Gaps = 54/212 (25%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAH------AGNVHGTGDIACDG---YH 80
FP F FG S + +Q E + W + H AG V +GD+ +G +
Sbjct: 4 FPNSFRFGWSQAGFQSEMGTPGSEDLNTDWYKWVHDPENMAAGLV--SGDLPENGPGYWG 61
Query: 81 KYKEDVKLMADTGLDAYRFSISWSRLIPNGRGPV-------------------------- 114
YK GL R + WSR PN P+
Sbjct: 62 NYKTFHNNAQKMGLKIARLNSEWSRQFPN---PLPRPQNFDESKQDVTEVEINENELKRL 118
Query: 115 ----NPKGLQYYNNLINELISYGIQPHVTLHHFDLPQALEDEY----------GGWINRT 160
N L +Y + +L S G+ ++H+ LP L D GW++
Sbjct: 119 DEYANKDALNHYREIFKDLKSRGLYFIQNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTR 178
Query: 161 IVKDFTAYADVCFRQFGDRVSYWTTVNEPNAF 192
V +F ++ +F D V ++T+NEPN
Sbjct: 179 TVYEFARFSAYTAWKFDDLVDEYSTMNEPNVV 210
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 369 DISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFELMDGYESSYGLYYVD 421
D R YL +++ V A+ +G+++RGY WS D +E G+ +GL VD
Sbjct: 395 DYQRPYYLVSHVYQVHRAINSGADVRGYLHWSLADNYEWASGFSMRFGLLKVD 447
>pdb|1GOW|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus
pdb|1GOW|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus
Length = 489
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 79/215 (36%), Gaps = 60/215 (27%)
Query: 30 FPPGFLFGASTSAYQVEGAANEDGRTPSIWDTFAH------AGNVHGTGDIACDG----- 78
FP F FG S + +Q E + W + H AG V +GD+ +G
Sbjct: 4 FPNSFRFGWSQAGFQSEMGTPGSEDPNTDWYKWVHDPENMAAGLV--SGDLPENGPGYWG 61
Query: 79 -YHKYKEDVKLMADTGLDAYRFSISWSRLIPNGRGPV----------------------- 114
Y + ++ + M GL R + WSR PN P+
Sbjct: 62 NYKTFHDNAQKM---GLKIARLNSEWSRQFPN---PLPRPQNFDESKQDVTEVEINENEL 115
Query: 115 -------NPKGLQYYNNLINELISYGIQPHVTLHHFDLPQALEDEY----------GGWI 157
N L +Y + +L S G+ ++H+ LP L D GW+
Sbjct: 116 KRLDEYANKDALNHYREIFKDLKSRGLYFIQNMYHWPLPLWLHDPIRVRRGDFTGPSGWL 175
Query: 158 NRTIVKDFTAYADVCFRQFGDRVSYWTTVNEPNAF 192
+ V +F ++ +F D V ++T+NEPN
Sbjct: 176 STRTVYEFARFSAYTAWKFDDLVDEYSTMNEPNVV 210
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 369 DISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFLDVFELMDGYESSYGLYYVD 421
D R YL +++ V A+ +G+++RGY WS D +E G+ +GL VD
Sbjct: 395 DYQRPYYLVSHVYQVHRAINSGADVRGYLHWSLADNYEWASGFSMRFGLLKVD 447
>pdb|3E05|A Chain A, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
pdb|3E05|B Chain B, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
pdb|3E05|C Chain C, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
pdb|3E05|D Chain D, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
pdb|3E05|E Chain E, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
pdb|3E05|F Chain F, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
pdb|3E05|G Chain G, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
pdb|3E05|H Chain H, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
Length = 204
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Query: 60 DTFAHAGNVHGTGDIACDGYHKYK-EDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKG 118
D FA A + ++ K + +D +M D G + SI S L+PNGR +
Sbjct: 14 DEFATAKKLITKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERN 73
Query: 119 LQYYNNLINELISYGIQPHVTLHHFDLPQALED 151
QY + + L + + +VTL P+ L+D
Sbjct: 74 PQYLGFIRDNLKKF-VARNVTLVEAFAPEGLDD 105
>pdb|3OJY|B Chain B, Crystal Structure Of Human Complement Component C8
Length = 537
Score = 28.5 bits (62), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 233 HASVARLYRKKYQDKQRGYIGVNIFAFGLLPLTNSTEDAIATQRYY 278
A+ R+Y KK Q + Y G+ A G+ TNS E + RYY
Sbjct: 98 EANCRRIY-KKCQHEMDQYWGIGSLASGINLFTNSFEGPVLDHRYY 142
>pdb|1VQ2|A Chain A, Crystal Structure Of T4-Bacteriophage Deoxycytidylate
Deaminase, Mutant R115e
Length = 193
Score = 28.5 bits (62), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 353 ATEIFCQNTPRRSSLKDISRVKYLHAYIGSVLDAVRNGSNIRGYFMWSFL 402
+T+ F RS+ + S +HA + ++L A NGS+I G M+ L
Sbjct: 80 STDRFVLAKEHRSAHSEWSSKNEIHAELNAILFAAENGSSIEGATMYVTL 129
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,771,487
Number of Sequences: 62578
Number of extensions: 730484
Number of successful extensions: 1851
Number of sequences better than 100.0: 79
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1418
Number of HSP's gapped (non-prelim): 171
length of query: 469
length of database: 14,973,337
effective HSP length: 102
effective length of query: 367
effective length of database: 8,590,381
effective search space: 3152669827
effective search space used: 3152669827
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)