Query 012182
Match_columns 469
No_of_seqs 238 out of 1443
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 04:22:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012182.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012182hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vat_A Dnpep, aspartyl aminope 100.0 1E-105 3E-110 849.4 34.7 412 52-468 30-496 (496)
2 4eme_A M18 aspartyl aminopepti 100.0 1E-101 5E-106 824.5 30.3 410 55-468 4-570 (571)
3 2glf_A Probable M18-family ami 100.0 4.3E-95 1.5E-99 764.4 32.4 390 38-458 2-450 (450)
4 2glj_A Probable M18-family ami 100.0 7E-93 2.4E-97 750.4 18.1 397 36-456 1-460 (461)
5 1y7e_A Probable M18-family ami 100.0 2.5E-90 8.6E-95 730.4 21.6 392 39-456 2-457 (458)
6 2ijz_A Probable M18-family ami 100.0 1.1E-91 3.8E-96 735.6 -2.3 368 60-457 4-424 (428)
7 2vpu_A TET3, 354AA long hypoth 100.0 5.8E-47 2E-51 388.6 25.4 233 151-461 117-350 (354)
8 3kl9_A PEPA, glutamyl aminopep 100.0 1E-45 3.5E-50 379.5 22.8 233 151-460 114-346 (355)
9 3isx_A Endoglucanase; TM1050, 100.0 1.2E-45 4E-50 377.3 22.1 227 151-456 115-342 (343)
10 1ylo_A Hypothetical protein SF 100.0 6.5E-33 2.2E-37 281.1 21.7 231 155-460 108-338 (348)
11 1vho_A Endoglucanase; structur 100.0 3E-32 1E-36 276.5 22.6 227 149-460 110-336 (346)
12 1y0y_A FRV operon protein FRVX 100.0 4.2E-32 1.4E-36 276.8 22.6 235 151-460 115-350 (353)
13 2gre_A Deblocking aminopeptida 100.0 8.2E-32 2.8E-36 274.5 22.1 228 149-457 114-344 (349)
14 1vhe_A Aminopeptidase/glucanas 100.0 2.8E-30 9.6E-35 265.5 26.3 240 150-460 115-354 (373)
15 2fvg_A Endoglucanase; TM1049, 100.0 2.3E-29 7.8E-34 255.4 20.5 233 150-460 102-335 (340)
16 2wyr_A Cobalt-activated peptid 100.0 1.7E-28 6E-33 247.7 26.6 225 150-458 107-332 (332)
17 3cpx_A Aminopeptidase, M42 fam 100.0 1.1E-30 3.8E-35 263.8 10.6 186 214-458 136-321 (321)
18 2wzn_A TET3, 354AA long hypoth 99.7 5.4E-15 1.8E-19 143.8 23.8 200 213-464 153-353 (354)
19 4h2k_A Succinyl-diaminopimelat 99.6 2.7E-15 9.3E-20 147.2 10.2 172 245-460 94-268 (269)
20 3t68_A Succinyl-diaminopimelat 99.5 3.5E-14 1.2E-18 139.1 8.5 170 245-458 94-266 (268)
21 1rtq_A Bacterial leucyl aminop 99.2 2.1E-11 7.1E-16 121.3 8.3 167 246-460 110-288 (299)
22 1tkj_A Aminopeptidase, SGAP; d 99.1 9.6E-11 3.3E-15 115.8 9.6 159 251-460 95-277 (284)
23 1fno_A Peptidase T; metallo pe 99.0 1.2E-09 4.3E-14 112.6 9.2 80 376-461 328-407 (417)
24 3gb0_A Peptidase T; NP_980509. 98.7 3.8E-08 1.3E-12 99.8 11.5 77 376-458 295-371 (373)
25 2ek8_A Aminopeptidase; metallo 98.7 8.8E-08 3E-12 99.6 14.0 160 250-460 237-401 (421)
26 3rza_A Tripeptidase; phosphory 98.7 3.5E-08 1.2E-12 101.2 10.3 78 377-460 316-393 (396)
27 1cg2_A Carboxypeptidase G2; me 98.2 7.7E-07 2.6E-11 90.9 5.7 78 378-460 312-391 (393)
28 3tx8_A Succinyl-diaminopimelat 98.1 1.7E-05 5.6E-10 80.1 12.2 50 406-456 318-368 (369)
29 3iib_A Peptidase M28; YP_92679 98.0 6.8E-06 2.3E-10 86.2 7.0 163 250-463 266-435 (444)
30 3pfo_A Putative acetylornithin 98.0 2.1E-05 7.2E-10 81.1 10.5 80 377-461 350-430 (433)
31 3ife_A Peptidase T; metallopep 98.0 4.3E-05 1.5E-09 79.2 12.8 80 375-460 353-432 (434)
32 3mru_A Aminoacyl-histidine dip 97.7 0.00019 6.4E-09 75.9 13.0 81 375-460 406-488 (490)
33 3isz_A Succinyl-diaminopimelat 97.7 9.4E-05 3.2E-09 74.3 8.6 94 360-459 279-375 (377)
34 3tc8_A Leucine aminopeptidase; 97.7 8.1E-05 2.8E-09 74.4 8.0 162 247-456 121-307 (309)
35 2qyv_A XAA-His dipeptidase; YP 97.5 0.001 3.4E-08 69.9 14.4 78 377-459 406-485 (487)
36 1q7l_B Aminoacylase-1; catalys 97.5 0.00048 1.7E-08 55.7 8.8 76 380-461 3-81 (88)
37 3gux_A Putative Zn-dependent e 96.8 0.002 7E-08 64.4 7.6 160 247-453 123-305 (314)
38 3n5f_A L-carbamoylase, N-carba 96.7 0.0021 7.1E-08 65.8 6.9 78 375-459 327-406 (408)
39 4fuu_A Leucine aminopeptidase; 96.6 0.01 3.5E-07 58.8 11.1 165 249-449 123-296 (309)
40 1z2l_A Allantoate amidohydrola 96.5 0.0071 2.4E-07 61.9 9.3 79 375-460 331-411 (423)
41 4fai_A CG5976, isoform B; alph 96.0 0.012 4E-07 59.1 7.7 48 250-297 126-173 (330)
42 1q7l_A Aminoacylase-1; catalys 96.0 0.0052 1.8E-07 56.8 4.4 55 244-301 103-159 (198)
43 3pb6_X Glutaminyl-peptide cycl 95.8 0.026 8.9E-07 56.8 9.2 174 248-458 129-327 (330)
44 4f9u_A CG32412; alpha/beta hyd 95.6 0.09 3.1E-06 51.8 11.8 48 249-296 99-148 (312)
45 2afw_A Glutaminyl-peptide cycl 95.4 0.12 4.1E-06 51.5 12.1 45 248-292 122-171 (329)
46 3fed_A Glutamate carboxypeptid 95.1 0.029 9.9E-07 62.1 7.0 52 250-301 341-392 (707)
47 1vgy_A Succinyl-diaminopimelat 95.1 0.017 5.7E-07 58.6 4.8 79 377-461 301-380 (393)
48 2v8h_A Beta-alanine synthase; 95.0 0.049 1.7E-06 56.9 8.2 79 375-460 365-447 (474)
49 3kas_A Transferrin receptor pr 94.1 0.018 6.1E-07 63.0 2.3 146 250-441 295-455 (640)
50 3ct9_A Acetylornithine deacety 92.9 0.098 3.4E-06 52.3 5.4 49 406-458 305-354 (356)
51 2f7v_A Aectylcitrulline deacet 92.1 0.13 4.6E-06 51.4 5.2 73 378-457 293-367 (369)
52 2pok_A Peptidase, M20/M25/M40 91.8 0.13 4.4E-06 53.5 4.8 77 377-458 400-480 (481)
53 2zog_A Cytosolic non-specific 91.4 0.13 4.5E-06 53.3 4.3 79 377-460 394-476 (479)
54 2pok_A Peptidase, M20/M25/M40 90.5 0.18 6E-06 52.5 4.3 51 245-298 138-189 (481)
55 2rb7_A Peptidase, M20/M25/M40 90.0 0.1 3.5E-06 52.3 1.8 54 406-460 306-360 (364)
56 3pfe_A Succinyl-diaminopimelat 89.7 0.56 1.9E-05 48.7 7.3 79 377-460 387-470 (472)
57 3khx_A Putative dipeptidase sa 89.6 0.16 5.3E-06 53.4 2.9 74 378-459 413-489 (492)
58 2zog_A Cytosolic non-specific 87.6 0.62 2.1E-05 48.1 5.9 52 244-298 126-178 (479)
59 1ysj_A Protein YXEP; M20 famil 86.7 0.48 1.7E-05 48.0 4.4 77 376-460 320-401 (404)
60 3khx_A Putative dipeptidase sa 85.6 0.76 2.6E-05 48.1 5.3 52 244-298 128-180 (492)
61 1lfw_A PEPV; hydrolase, dipept 85.5 0.74 2.5E-05 47.4 5.1 74 377-460 388-466 (470)
62 1xmb_A IAA-amino acid hydrolas 85.5 0.93 3.2E-05 46.1 5.8 79 376-460 316-403 (418)
63 1lfw_A PEPV; hydrolase, dipept 85.4 0.45 1.5E-05 49.1 3.3 52 244-298 109-161 (470)
64 3pfe_A Succinyl-diaminopimelat 84.1 0.63 2.1E-05 48.3 3.8 51 244-298 120-171 (472)
65 3dlj_A Beta-Ala-His dipeptidas 83.6 1.3 4.4E-05 46.1 5.9 78 379-461 403-484 (485)
66 3dlj_A Beta-Ala-His dipeptidas 83.5 0.8 2.7E-05 47.6 4.3 51 245-298 134-185 (485)
67 2rb7_A Peptidase, M20/M25/M40 81.8 0.43 1.5E-05 47.7 1.4 52 244-298 90-148 (364)
68 3isz_A Succinyl-diaminopimelat 78.9 1.3 4.5E-05 43.7 3.8 52 244-298 90-143 (377)
69 3ram_A HMRA protein; two-domai 78.3 2.1 7.3E-05 43.2 5.2 76 376-458 286-372 (394)
70 1vgy_A Succinyl-diaminopimelat 78.0 1.4 4.9E-05 44.2 3.8 52 244-298 93-146 (393)
71 2f7v_A Aectylcitrulline deacet 77.7 1.4 4.7E-05 44.0 3.6 43 246-298 98-142 (369)
72 3ct9_A Acetylornithine deacety 73.9 2.5 8.5E-05 42.0 4.2 52 244-300 95-148 (356)
73 1xmb_A IAA-amino acid hydrolas 67.9 2.4 8.1E-05 43.1 2.5 48 245-298 111-158 (418)
74 3io1_A Aminobenzoyl-glutamate 64.4 6.4 0.00022 40.3 5.0 84 375-460 343-433 (445)
75 3n5f_A L-carbamoylase, N-carba 62.0 4.5 0.00015 40.8 3.3 48 251-301 88-140 (408)
76 3k9t_A Putative peptidase; str 60.5 38 0.0013 35.0 9.9 154 251-458 194-353 (435)
77 2v8h_A Beta-alanine synthase; 33.3 15 0.00051 37.9 1.7 47 253-302 124-175 (474)
78 1z2l_A Allantoate amidohydrola 26.7 23 0.00078 35.5 1.7 40 252-294 93-132 (423)
79 1ysj_A Protein YXEP; M20 famil 23.6 42 0.0014 33.5 3.0 47 246-298 118-164 (404)
80 1e2b_A Enzyme IIB-cellobiose; 20.7 3.3E+02 0.011 21.9 7.9 66 371-445 11-85 (106)
No 1
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=100.00 E-value=9.8e-106 Score=849.37 Aligned_cols=412 Identities=47% Similarity=0.800 Sum_probs=367.9
Q ss_pred ccccchHHHHHHHHHHHhcCCChHHHHHHHHHHHHHCCCcccccCCcccccCCCeEEEEeCCcEEEEEEeCCcCcc----
Q 012182 52 AQSSSSSSIVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSV---- 127 (469)
Q Consensus 52 ~~~~~~~~~a~~~~~FL~~spT~~hav~~~~~~L~~~GF~~L~e~~~W~l~~g~kyf~~r~~s~iiAf~vG~~~~~---- 127 (469)
.+++++++++++|++||++||||||||++++++|+++||++|+|+++|+++||+|||++||+++||||.+|+++.+
T Consensus 30 ~~~~~~~~~a~~~~~Fl~~spT~~hav~~~~~~L~~aGF~~L~e~~~w~l~~ggkyyv~rn~ssliAf~vg~~~~~~~G~ 109 (496)
T 3vat_A 30 ARKEAVQAAARELLKFVNRSPSPFHAVAECRSRLLQAGFHELKETESWDIKPESKYFLTRNSSTIIAFAVGGQYVPGNGF 109 (496)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTCCE
T ss_pred hHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCcCeEccccCCcccCCCCEEEEECCCcEEEEEEeCCCCCCCCCe
Confidence 4445667899999999999999999999999999999999999999999999999999999999999999987532
Q ss_pred -------------------------------------------------cEEEEEc-CCCcEEEEEeeeCCCeEeecccc
Q 012182 128 -------------------------------------------------GRVIVRG-SDGSFLHKLVKVKRPLLRVPTLA 157 (469)
Q Consensus 128 -------------------------------------------------GrV~~k~-~~g~~~~~lv~~~~Pv~~Ip~La 157 (469)
|||++|+ ++|+++++||++++||++||+||
T Consensus 110 ~ivgaHtDSP~lklKp~p~~~~~g~~~l~ve~YGG~l~~tW~DR~L~laGrV~vk~~~~g~~~~~Lv~~~~Pi~~IP~La 189 (496)
T 3vat_A 110 SLIGAHTDSPCLRVKRRSRRSQVGFQQVGVETYGGGIWSTWFDRDLTLAGRVIVKCPTSGRLEQRLVHVDRPILRIPHLA 189 (496)
T ss_dssp EEEEEECCCCEEEEEEEEEEEETTEEEEEEEEESSCCGGGGTTCCEEEEEEEEEECTTTCCEEEEEEECCSCCBBCCCCC
T ss_pred EEEEEeccCCCccccCCccccCCCeeEEccEeCCCchhceecCCchhcceEEEEEecCCCeEEEEEEeCCCCeEECCccc
Confidence 9999995 56899999999999999999999
Q ss_pred cccccccccCCCCCCccccccceeeccCccccCC-ccccCCCCCCccCChhHHHHHHHHHhCCCCCceeEEEEEeeecCC
Q 012182 158 IHLDRTVNKDGFKPNLETQLIPLLATKSEETSVE-PKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIELNICDTQP 236 (469)
Q Consensus 158 iHL~~~~~~~~~~~n~~~~l~piig~~~~~~~~~-~~~~~~~~~~~~~h~~~ll~~la~~~gV~~gDiv~~dl~l~d~~~ 236 (469)
|||+|++| ++|++|+|+||+||+|....++.++ ..++++.+..+++|+..||++|++++||++||+++||++++|+||
T Consensus 190 iHl~r~~n-~~~~~n~q~~l~pi~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~la~~~gv~~~Div~~dl~l~d~~~ 268 (496)
T 3vat_A 190 IHLQRNVN-ENFGPNMEMHLVPILATSIQEELEKGTPEPGPLNATDERHHSVLTSLLCAHLGLSPEDILEMELCLADTQP 268 (496)
T ss_dssp GGGSTTTT-TCCCCCTTTTTCCEEEEHHHHHHHCC-----------CCSCHHHHHHHHHHHTCCGGGEEEEEEEEEECSC
T ss_pred cccCcchh-cccCcCcccccccEEEeccccccccccccccccccccccccHHHHHHHHHHcCCCcCceEEEEEEEEecCc
Confidence 99999998 8899999999999999753211000 000011111256889999999999999999999999999999999
Q ss_pred ccccCCCCceeeeccccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCcchHHHHHHHHhcc
Q 012182 237 SCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSL 316 (469)
Q Consensus 237 ~~~~Gl~~e~I~~~~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~gA~s~~~~dil~ri~~~~ 316 (469)
++++|++++||+|+|||||+|||++++||+++++.+..+.....+.++++||||||||+|++||++.|+||+|+||..+.
T Consensus 269 ~~~~Gl~~e~I~s~~lDnr~~~~~~leaL~~~~~~~~~~~~~~~~~v~v~~dqEEVGs~ga~gA~s~~~pdvl~ri~~~~ 348 (496)
T 3vat_A 269 AVLGGAYEEFIFAPRLDNLHSCFCALQALIDSCSAPASLAADPHVRMIALYDNEEVGSESAQGAQSLLTELVLRRISASP 348 (496)
T ss_dssp CEEETTTTCEEEETTHHHHHHHHHHHHHHHHHTTSHHHHHHCCSEEEEEEESCGGGTSCSSSSTTSTHHHHHHHHHHCCS
T ss_pred ceEeccCCceEEeeccccHHHHHHHHHHHHhhhccccccccCCCcEEEEEEccCCcCCCcchhccccccHHHHHHHHhcc
Confidence 99999999999999999999999999999988531000000134677999999999999999999999999999999774
Q ss_pred cccCCchhhhhhhccCceEEEEecCCCCCCCCCccccCCCCCcCCCCceEEEcCCCCcccCHHHHHHHHHHHHHCCCCEe
Q 012182 317 AHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQ 396 (469)
Q Consensus 317 ~~~~~~~~~~~~~~~~s~~IS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q 396 (469)
+ +.+.+++++++|++||+||+||.||||+++++++|.+.||+||+||++++++|+||+.+.++++++|+++|||||
T Consensus 349 ~----~~~~~~~~l~~S~~IS~DvahA~dPn~~~~~~~~~~~~LG~GpvIK~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q 424 (496)
T 3vat_A 349 Q----HLTAFEEAIPKSYMISADMAHAVHPNYLDKHEENHRPLFHKGPVIKVNSKQRYASNAVSEALIREVASSVGVPLQ 424 (496)
T ss_dssp S----CTTHHHHHGGGCEEEEECCEECCBTTBGGGSCTTCCCCTTSCCEEECCTTTTSCCCHHHHHHHHHHHHHHTCCCE
T ss_pred C----chHHHHHHhhcCeEEEEeCCCCCCCCCcccccccCCcccCcCCEEEEcCCCCcccCHHHHHHHHHHHHHcCCCEE
Confidence 2 678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCCCCCCChHHHHhcCCCCcEEEechhhccccchhhhcCHHHHHHHHHHHHHHHhhccccccccccc
Q 012182 397 EFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLIVD 468 (469)
Q Consensus 397 ~~v~r~D~~gGgTig~i~~s~~Gi~tidIGiP~r~MHS~~E~~~~~Dv~~~~~ll~af~~~~~~~~~~~~~~ 468 (469)
.++.|+|++||||+|+|++++.||||+|||+|+||||||+||++++|++++++|+++||+++.+++.++.+|
T Consensus 425 ~~v~r~D~~gGgTig~i~~s~~Gi~tvdIGiP~ryMHS~~E~~~~~D~~~~v~Ll~af~~~~~~~~~~~~~~ 496 (496)
T 3vat_A 425 DLMVRNDSPCGTTIGPILASRLGLRVLDLGSPQLAMHSIRETACTTGVLQTITLFKGFFELFPSLSRSLLVD 496 (496)
T ss_dssp EECCCTTSCCCCCHHHHHHHHHTCEEEEEECEEESTTSSSEEEESHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred EEEecCCCCCcchHHHHHhcccCCcEEEecHhhhccccHHHHhhHHHHHHHHHHHHHHHHhHHHHhhhhcCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999888775
No 2
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.4e-101 Score=824.47 Aligned_cols=410 Identities=30% Similarity=0.534 Sum_probs=354.9
Q ss_pred cchHHHHHHHHHHHhcCCChHHHHHHHHHHHHHCCCcccccCCcccccCCCeEEEEeCCcEEEEEEeCCcCcc-------
Q 012182 55 SSSSSIVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSV------- 127 (469)
Q Consensus 55 ~~~~~~a~~~~~FL~~spT~~hav~~~~~~L~~~GF~~L~e~~~W~l~~g~kyf~~r~~s~iiAf~vG~~~~~------- 127 (469)
+..++++++|++||++||||||||++++++|+++||++|+|++.|+++||+|||++||+++||||+||++|.+
T Consensus 4 ~~~~~~a~~~~~Fl~~spT~~HaV~~~~~~L~~aGF~~L~E~~~W~l~~Ggkyy~~rn~ssiiAf~vG~~~~~~~G~~~I 83 (571)
T 4eme_A 4 KKAREYAQDALKFIQRSGSNFLACKNLKERLENNGFINLSEGETWNLNKNEGYVLCKENRNICGFFVGKNFNIDTGSILI 83 (571)
T ss_dssp HHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTTCCEEE
T ss_pred hHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCcCEEccccCCcccCCCCEEEEEcCCCEEEEEEeCCcCCCCCCcEEE
Confidence 3457799999999999999999999999999999999999999999999999999999999999999988532
Q ss_pred -----------------------------------------------cEEEEEcCCCcEEEEEeeeCCCeEeeccccccc
Q 012182 128 -----------------------------------------------GRVIVRGSDGSFLHKLVKVKRPLLRVPTLAIHL 160 (469)
Q Consensus 128 -----------------------------------------------GrV~~k~~~g~~~~~lv~~~~Pv~~Ip~LaiHL 160 (469)
|||++|+ +|+++++||++++||++||+|||||
T Consensus 84 vgAHtDSP~lklKP~p~~~~~g~~~l~ve~YGG~l~~tW~DRdLslaGrV~vk~-~g~~~~~LV~~~~Pi~~IP~LAiHL 162 (571)
T 4eme_A 84 SIGHIDSCALKISPNNNVIKKKIHQINVECYGSGLWHTWFDRSLGLSGQVLYKK-GNKLVEKLIQINKSVLFLPSLAIHL 162 (571)
T ss_dssp EEEECCCCEEEEEEEEEEEETTEEEEEEEEESSCCGGGGTTCCEEEEEEEEEEE-TTEEEEEEEEEEEEEEBCCCCCGGG
T ss_pred EEEeccCCcccccCCccccCCCeeEEeeEecCCchhccccCCcceeeeEEEEec-CCcEEEEEecCCCCeEEcCcccccc
Confidence 9999984 6899999999999999999999999
Q ss_pred ccccccCCCCC----CccccccceeeccCcccc------------------C--------C--cc---c-----------
Q 012182 161 DRTVNKDGFKP----NLETQLIPLLATKSEETS------------------V--------E--PK---E----------- 194 (469)
Q Consensus 161 ~~~~~~~~~~~----n~~~~l~piig~~~~~~~------------------~--------~--~~---~----------- 194 (469)
+| + ++|++ |+|+||.||+|....+.. + + ++ +
T Consensus 163 ~r--~-~~~~~~~~~N~q~~l~Pi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (571)
T 4eme_A 163 QN--R-TRYDFSVKINYENHIKPIISTTLFNQLNKCKRNNVHHDTILTTDTKFSHKENSQNKRDDQMCHSFNDKDVSNHN 239 (571)
T ss_dssp SC--C-----CCCCCCTTTTCCCEEEEHHHHHHHHHC-------------------------------------------
T ss_pred Cc--c-cccccccccccccccceeEeecchhhcccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 98 3 56788 999999999987321000 0 0 00 0
Q ss_pred ---------cCCCCCCccCCh------------------hHHHHHHHHHhCCCCCceeEEEEEeeecCCccccCCCCcee
Q 012182 195 ---------KSSTSSSKVTHH------------------PQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFI 247 (469)
Q Consensus 195 ---------~~~~~~~~~~h~------------------~~ll~~la~~~gV~~gDiv~~dl~l~d~~~~~~~Gl~~e~I 247 (469)
.++....+++|+ ..||++|++++||+++||++|||++||+||++++|++++||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~ll~lla~~~gi~~edIl~~EL~l~d~q~a~~~Gl~~efI 319 (571)
T 4eme_A 240 LDKNTIEHLTNQQNEEKNKHTKDNPNSKDIVEHINTDNSYPLLYLLSKELNCKEEDILDFELCLMDTQEPCFTGVYEEFI 319 (571)
T ss_dssp ---------------------------------CCTTSCHHHHHHHHHHHTSCGGGEEEEEEEEEECSCCEEESTTSCEE
T ss_pred ccccccccccccccchhcccccccccccccccccccccHHHHHHHHHHHhCCCHHHeeeceEEEecCCCcceecCCccee
Confidence 001122345676 89999999999999999999999999999999999999999
Q ss_pred eeccccchhcHHHHHHHHHHcCCCC------------CCCCCCC------ceEEEEEEeccccCcccccccCCcchHHHH
Q 012182 248 FSGRLDNLASSYCGLRALIDSCVSP------------SNLSSEH------AIRMVALFDNEEVGSDSYQGAGAPTMFQAI 309 (469)
Q Consensus 248 ~~~~lDnr~g~~~~leal~~~~~~~------------~~~~~~~------~~~~~v~~dqEEVGsrga~gA~s~~~~dil 309 (469)
+|+|||||+|||++++||+++.... ..+++.. .+.++++||+|||||.|+|||.|.|++++|
T Consensus 320 ~s~RlDnl~~~~~al~All~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~lfD~EEIGS~s~qGA~S~fl~~~l 399 (571)
T 4eme_A 320 EGARFDNLLGSFCVFEGFIELVNSIKNHTSNENTNHTNNITNDINDNIHNNLYISIGYDHEEIGSLSEVGARSYCTKNFI 399 (571)
T ss_dssp EETTHHHHHHHHHHHHHHHHHHHHHTTC----------------CCCGGGCEEEEEEESCGGGTSCSTTSTTSTHHHHHH
T ss_pred eccCcccHHHHHHHHHHHHhccccccccccccccccccccccccccccccceeEEEEecccccCCCCCCCcCChHHHHHH
Confidence 9999999999999999999763200 0011112 578999999999999999999999999999
Q ss_pred HHHHhccccc------CCchhhhhhhccCceEEEEecCCCCCCCCCccccCCCCCcCCCCceEEEcCCCCcccCHHHHHH
Q 012182 310 RRIVGSLAHE------HVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFL 383 (469)
Q Consensus 310 ~ri~~~~~~~------~~~~~~~~~~~~~s~~IS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~ 383 (469)
+||..+++.. ..+.+.+.+++++|++||+||+||.||||++++++.|.+.||+||+||++++++|++|+.+.++
T Consensus 400 ~RI~~~~g~~~~~~~~~~~~~~~~~~la~S~~ISaDvahA~dPny~~~~d~~~~~~LG~GpvIk~~~~~~y~tn~~~~~~ 479 (571)
T 4eme_A 400 DRIISSVFKKEIHEKNLSVQEIYGNLVNRSFILNVDMAHCSHPNYPETVQDNHQLFFHEGIAIKYNTNKNYVTSPLHASL 479 (571)
T ss_dssp HHHHHHHTHHHHHTSCCCHHHHHHHHHTTCEEEEECCEECCCTTCGGGSCTTSCCCTTSCEEEECCTTSSSCCCHHHHHH
T ss_pred HHHHHhhCcccccccccccHHHHHHHHHhCeEEEEECCCCcCCCCcccccccCCcccCcCceEEEeCCCCcccCHHHHHH
Confidence 9999988641 0136789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHC------CCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEechhhccccchhhhcCHHHHHHHHHHHHHHHhh
Q 012182 384 FKEIAKLH------NLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYES 457 (469)
Q Consensus 384 l~~ia~~~------~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tidIGiP~r~MHS~~E~~~~~Dv~~~~~ll~af~~~ 457 (469)
|+++|+++ |||||.++.|+|++||||+|+|++++.||||+|||+|+||||||+||+++.|++++++|+++||++
T Consensus 480 l~~iA~~~~~~~~~gIP~Q~~v~rnD~~gGgTig~i~~s~~GIpTvdIGiP~ryMHS~~E~~~~~Dv~~~vkLl~aFl~~ 559 (571)
T 4eme_A 480 IKRTFELYYNKYKQQIKYQNFMVKNDTPCGSTVGSMVAANLSMPGIDIGIPQLAMHSIREIAAVHDVFFLIKGVFAFYTY 559 (571)
T ss_dssp HHHHHHHHHHHHCCCCCEEEECCCSSSCCCCCSHHHHHHHHTCCEEEEECEEESTTSSSEEEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcccccCCCCCEEEEEEcCCCCCcchHHHHHHhCCCCcEEEechhhhccchHHHHhhHHHHHHHHHHHHHHHHh
Confidence 99999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccc
Q 012182 458 FSSIDKKLIVD 468 (469)
Q Consensus 458 ~~~~~~~~~~~ 468 (469)
+.+++.++..|
T Consensus 560 ~~~~~~~~~~~ 570 (571)
T 4eme_A 560 YNQVLSTCVHD 570 (571)
T ss_dssp HHHHHHTEECC
T ss_pred HHHHHhhhcCC
Confidence 99999887765
No 3
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=100.00 E-value=4.3e-95 Score=764.39 Aligned_cols=390 Identities=21% Similarity=0.312 Sum_probs=351.5
Q ss_pred cccCCCCCccccccccccchHHHHHHHHHHHhcCCChHHHHHHHHHHHHHCCCcccccCCcccccCCCeEEEEeCCcEEE
Q 012182 38 YRPRTLHNFSTSGIAQSSSSSSIVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLV 117 (469)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~FL~~spT~~hav~~~~~~L~~~GF~~L~e~~~W~l~~g~kyf~~r~~s~ii 117 (469)
.+++++|+. .+..++++++++|++||++||||||||++++++|+++||++|+|++. ++||+|||++|++++||
T Consensus 2 ~~~~~~w~~-----~~~~~~~~~~~~~~~Fl~~s~t~~h~v~~~~~~l~~~Gf~~l~e~~~--l~~g~k~~~~r~~~~li 74 (450)
T 2glf_A 2 MERKNVWHH-----RKKEEIEAFSKEYMEFMSKAKTERMTVKEIKRILDESGFVPLEDFAG--DPMNMTVYAVNRGKAIA 74 (450)
T ss_dssp CCCCCGGGT-----SCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHTTTCEETTSCCS--CTTSBCEEEESSSSCEE
T ss_pred CCccccCcH-----HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCcCEEcccccC--CCCCCEEEEEcCCCEEE
Confidence 367899993 44456677999999999999999999999999999999999999987 89999999999999999
Q ss_pred EEEeCCcC-cc--------------------------------------------------cEEEEEcCCCcEEEEEe--
Q 012182 118 AFAVGQKY-SV--------------------------------------------------GRVIVRGSDGSFLHKLV-- 144 (469)
Q Consensus 118 Af~vG~~~-~~--------------------------------------------------GrV~~k~~~g~~~~~lv-- 144 (469)
||.+|+.. .+ |||++++ |+.+.++|
T Consensus 75 a~~~g~~~~~g~~ii~AH~Dsp~l~Vk~~~~i~~~G~~~l~v~~yGG~~~~~w~dr~L~laGrV~v~~--g~~~~~~ig~ 152 (450)
T 2glf_A 75 AFRVVDDLKRGLNLVVAHIDSPRLDFKPNPLIEDEQIALFKTHYYGGIKKYHWLSIPLEIHGVLFKND--GTEIEIHIGD 152 (450)
T ss_dssp EEEBCSCGGGCCEEEEEECCCCEEEEEEEEEEEETTEEEEEEEEESSCCSGGGSSSCEEEEEEEECTT--SCEEEEEESS
T ss_pred EEEeCCCCCCCeEEEEEecccCCeEEecCCeecCCCEEEEEeEeeCCcchhhccCcccceeeEEEEeC--CCeeEeeecc
Confidence 99999631 11 8999874 45666666
Q ss_pred eeCCCeEeecccccccccccccCCCCCCccccccceeeccCccccCCccccCCCCCCccCChhHHHHHHHHHhCCCCCce
Q 012182 145 KVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDI 224 (469)
Q Consensus 145 ~~~~Pv~~Ip~LaiHL~~~~~~~~~~~n~~~~l~piig~~~~~~~~~~~~~~~~~~~~~~h~~~ll~~la~~~gV~~gDi 224 (469)
+.++||++||+|||||+++.+ ++++++++++|+||+|..+.+. ++ +++|+..|++++++++||++||+
T Consensus 153 ~~~~pi~~Ip~laiHl~~~~~-~~~~~~~~~~l~~~iG~~~~~~------~~-----~~~~~~~ll~~la~~~gv~~~di 220 (450)
T 2glf_A 153 KPEDPVFTIPDLLPHLDKEDA-KISEKFKGENLMLIAGTIPLSG------EE-----KEAVKTNVLKILNEMYGITEEDF 220 (450)
T ss_dssp SSSSCBBCCCCCCGGGCCCCC-BTTTTSCGGGCEEEEECCCCTT------CC-----SSHHHHHHHHHHHHHHCCCGGGG
T ss_pred cCCCceEEeccCccccccccc-ccccCCchhcceEEEecCCCcc------cc-----hhhhHHHHHHHHHHHcCCCcccE
Confidence 889999999999999998865 6689999999999999865211 00 13578899999999999999999
Q ss_pred eEEEEEeeecCCccccCCCCceeeeccccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCcc
Q 012182 225 ASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPT 304 (469)
Q Consensus 225 v~~dl~l~d~~~~~~~Gl~~e~I~~~~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~gA~s~~ 304 (469)
++||++++|+||++.+|++++||+|+|||||+|||++++||+++ + .+.+.++++||||||||+|++||+|.|
T Consensus 221 v~~dl~~~~~~~~~~~Gl~~~~i~~~~lDnr~~~~~~l~al~~~-~-------~~~~~~~~~~d~EEVGs~ga~gA~s~~ 292 (450)
T 2glf_A 221 VSGEIEVVPAFSPREVGMDRSLIGAYGQDDRICAYTALRALLSA-N-------PEKSIGVIFFDKEEIGSDGNTGAKARF 292 (450)
T ss_dssp TTEEEEEEECCCCEEESTTCCEEEETTHHHHHHHHHHHHHHHHC-C-------CSSCEEEEEESCGGGTSCSSSSSSSSH
T ss_pred EEEEEEEEecccceecccCCcEEEEecchhhHHHHHHHHHHHhc-C-------CCceEEEEEEcccccCCcchhhhcchh
Confidence 99999999999999999999999999999999999999999987 2 345789999999999999999999999
Q ss_pred hHHHHHHHHhcccccCCchhhhhhhccCceEEEEecCCCCCCCCCccccCCCCCcCCCCceEEE--cCCCCcc---cCHH
Q 012182 305 MFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKH--NANQRYA---TSGV 379 (469)
Q Consensus 305 ~~dil~ri~~~~~~~~~~~~~~~~~~~~s~~IS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~--~~~~~y~---t~~~ 379 (469)
++|+|+||..+++. ..+++.+++++++|++||+||+||.||||+++|+++|.+.||+||+||+ +++|+|+ +|+.
T Consensus 293 l~~~l~ri~~~~~~-~~~~~~~~~~l~~s~~iS~DvahA~~Pn~~~~~~~~~~~~lg~Gpvik~~~~a~~~y~t~~~~~~ 371 (450)
T 2glf_A 293 YLKALRQILKMQGA-KDSEFVLDEVLENTSVISGDVCAAVNPPYKDVHDLHNAPKLGYGVALVKYTGARGKYSTNDAHAE 371 (450)
T ss_dssp HHHHHHHHHHHTTC-SSSHHHHHHHHHSCEEEEECCEECCCGGGGGGSCGGGCCCTTSCEEEESBCCSTTSTTCCBCCHH
T ss_pred HHHHHHHHHHhhcc-ccchHHHHHhhcCCeEEEEecccCcCCCCcccccccCCccCCcCCEEEEECCCCcccccccCCHH
Confidence 99999999988753 1257789999999999999999999999999999999999999999996 4788898 5999
Q ss_pred HHHHHHHHHHHCCCCEeEEEe-ecCCCCCCChHHHHhcCCCCcEEEechhhccccchhhhcCHHHHHHHHHHHHHHHhhc
Q 012182 380 TAFLFKEIAKLHNLPTQEFVV-RNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESF 458 (469)
Q Consensus 380 ~~~~l~~ia~~~~Ip~Q~~v~-r~D~~gGgTig~i~~s~~Gi~tidIGiP~r~MHS~~E~~~~~Dv~~~~~ll~af~~~~ 458 (469)
+.++++++|+++|||||.++. |+|++||||+|+|+ ++.||||+|||+|+||||||+||++++|++++++|+++||+++
T Consensus 372 ~~~~~~~ia~~~~Ip~Q~~~~gr~d~~gGstig~i~-a~~Gi~tvdiGiP~l~MHS~~E~~~~~D~~~~~~l~~af~~~l 450 (450)
T 2glf_A 372 FVARVRKVLNEQGVIWQVATLGKVDQGGGGTIAKFF-AERGSDVIDMGPALLGMHSPFEISSKADLFETYVAYRSLMEKL 450 (450)
T ss_dssp HHHHHHHHHHHTTCCEEECCSSSTTSCCCCCTHHHH-HTTTSCEEEEECEEBSTTSSSEEEEHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCCEEEEEeccCCCCCCCcHHHHH-hCCCCcEEEechhhcccchHHHHhhHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999998 99999999999999 7999999999999999999999999999999999999999864
No 4
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=100.00 E-value=7e-93 Score=750.40 Aligned_cols=397 Identities=19% Similarity=0.275 Sum_probs=352.5
Q ss_pred CccccCCCCCccccccccccchHHHHHHHHHHHhcCCChHHHHHHHHHHHHHCCCcccccC--CcccccCCCeEEEEeCC
Q 012182 36 NRYRPRTLHNFSTSGIAQSSSSSSIVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNEN--DEWELKPGGGYFFTRNM 113 (469)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~FL~~spT~~hav~~~~~~L~~~GF~~L~e~--~~W~l~~g~kyf~~r~~ 113 (469)
|.|+++++|+ .++..+..++++++++|++||++||||||||++++++|+++||++|.|. +.|+++||++||++|++
T Consensus 1 ~~~~~~~~w~--~~~~~~~~~~~~~~~~~~~Fl~~spt~~hav~~~~~~l~~sGfe~l~e~~~~~w~l~~g~~~~~~~~g 78 (461)
T 2glj_A 1 LLKEYKNAWD--KYDDKQLKEVFALGDRFKNFISNCKTERECVTELIKTAEKSGYRNIEDILAKGETLKEGDKVYANNRG 78 (461)
T ss_dssp CCCCCCCSTT--TSCTTHHHHHHHTTHHHHHHHHHHHCCSSTHHHHHHHSCCSSCCCTTCCCSTTTTCCTTCCCEEEETT
T ss_pred CCcccCchhh--hCCHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHHHhhHhhccCCCCEEEEEcCC
Confidence 4688999999 6766676777889999999999999999999999999999999999998 88999999999999999
Q ss_pred cEEEEEEeCCcC--c-----------c---------------------------------------cEEEEEcCCCcEEE
Q 012182 114 SCLVAFAVGQKY--S-----------V---------------------------------------GRVIVRGSDGSFLH 141 (469)
Q Consensus 114 s~iiAf~vG~~~--~-----------~---------------------------------------GrV~~k~~~g~~~~ 141 (469)
++||||.+|+++ . | |||+++ +|+...
T Consensus 79 ~slia~~~G~~~~~~g~~ii~AH~Dspgl~VK~~~~i~~~G~l~l~~~~yGG~~~~~w~~~~L~l~g~vv~~--~g~~~~ 156 (461)
T 2glj_A 79 KGLIMFLIGKEPLYTGFKILGAHIDSPRLDLKQNPLYEDTDLAMLETHYYGGIKKYQWVTLPLAIHGVIVKK--DGTIVN 156 (461)
T ss_dssp TEEEECCCCSSCGGGCCEEEEEECCCCBBCCCSSCEEECSSSEEECCCCBSCCCSCCCSSSCEEECCEEECT--TCCEEE
T ss_pred CEEEEEEeCCcCccCCceEEEEecCcCCeEEecCCccCCCCeEEEEeeccCCEeccccCCcccccceEEEEe--CCCEEE
Confidence 999999999742 1 0 888875 566666
Q ss_pred EEe--eeCCCeEeecccccccccccccC-CCCCCccccccceeeccCccccCCccccCCCCCCccCChhHHHHHHHHHhC
Q 012182 142 KLV--KVKRPLLRVPTLAIHLDRTVNKD-GFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELG 218 (469)
Q Consensus 142 ~lv--~~~~Pv~~Ip~LaiHL~~~~~~~-~~~~n~~~~l~piig~~~~~~~~~~~~~~~~~~~~~~h~~~ll~~la~~~g 218 (469)
.+| +.++||++||+|||||+++++.. +++++++++|+|++|..+.+. +++ +++|+..|++++++++|
T Consensus 157 ~~Ig~~~~~pv~~Ip~laiHl~~~~~~~~~~~~~~~~~l~~~iG~~~~~~------~~e----~~~~~~~ll~~la~~~G 226 (461)
T 2glj_A 157 VCVGEDDNDPVFGVSDILVHLASEQLEKKASKVIEGEDLNILIGSIPLKD------GEE----KQKVKHNIMKILNEKYD 226 (461)
T ss_dssp CCBSCSTTSCBBCCCCCCGGGGGGTTSCTTCSSCCSCCCEEECSCCCSTT------CCC----SCHHHHHHHHHHHHSSC
T ss_pred EEEeccCCCcceecCCcccccCchhcccccccCCCcccceEEEecCcccc------ccc----hhhhHHHHHHHHHHHcC
Confidence 666 89999999999999999987622 368999999999999865210 000 13467789999999999
Q ss_pred CCCCceeEEEEEeeecCCccccCCCCceeeeccccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCccccc
Q 012182 219 CGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 298 (469)
Q Consensus 219 V~~gDiv~~dl~l~d~~~~~~~Gl~~e~I~~~~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~ 298 (469)
|++||+++|||+++|.++++.+|++++||.|+|||||+|||++++||+++++ .+.+.++++||||||||+|++
T Consensus 227 I~~gD~v~~dl~l~~~~~~~~~G~~~~~I~s~~lDdr~~~~~~l~al~~~~~-------~~~~~~~~~~d~EEVGs~ga~ 299 (461)
T 2glj_A 227 ISEEDFVSAELEIVPAGKARDYGFDRSMVMGYGQDDRICAYTSFEAMLEMKN-------AKKTCITILVDKEEVGSIGAT 299 (461)
T ss_dssp CCSTTGGGBCCCEEECSCCEEESTTCCEEEETTHHHHHHHHHHHHHHHTCCS-------CSSCEEEEEECCGGGTCCTTT
T ss_pred CCcccEEEeeeeeEecCCcEEecCCCCEEEEecchhHHHHHHHHHHHHhhcc-------CCCeEEEEEEccCCCCCcccc
Confidence 9999999999999999999999999999999999999999999999998752 345789999999999999999
Q ss_pred ccCCcchHHHHHHHHhcccccCCchhhhhhhccCceEEEEecCCCCCCCCCccccCCCCCcCCCCceEEEc--CCCCcc-
Q 012182 299 GAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHN--ANQRYA- 375 (469)
Q Consensus 299 gA~s~~~~dil~ri~~~~~~~~~~~~~~~~~~~~s~~IS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~--~~~~y~- 375 (469)
||++.|++++|+||+.+++. .+.+.+++++++|++||+||+||.||||+++++++|.+.||+||+||.+ ++++|+
T Consensus 300 ga~s~~l~~~l~ri~~~~~~--~~~~~~~~~~~~S~~iS~Dv~ha~~pn~~~~~~~~~~~~lg~G~vIk~~~~~~g~y~~ 377 (461)
T 2glj_A 300 GMQSKFFENTVADIMSLCGD--YDELKLRKALYNSEMLSSDVSAAFDPNYPNVMEKRNSAYLGKGIVFNKYTGSRGKSGC 377 (461)
T ss_dssp TSSSTTHHHHHHHHTC-------CCSCCCHHHHTCEECCBCCEEBCCTTCCTTSCSTTSBCTTSCEEEBSCCCSTTSCSS
T ss_pred ccccchHHHHHHHHHHhcCC--CchHHHHHHHhcCcEEEEecccccCCCCcccccccCCcccCCCcEEEEEcCCCCcccc
Confidence 99999999999999976632 1356789999999999999999999999999998899999999999974 789996
Q ss_pred --cCHHHHHHHHHHHHHCCCCEeEEEe-ecCCCCCCChHHHHhcCCCCcEEEechhhccccchhhhcCHHHHHHHHHHHH
Q 012182 376 --TSGVTAFLFKEIAKLHNLPTQEFVV-RNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFK 452 (469)
Q Consensus 376 --t~~~~~~~l~~ia~~~~Ip~Q~~v~-r~D~~gGgTig~i~~s~~Gi~tidIGiP~r~MHS~~E~~~~~Dv~~~~~ll~ 452 (469)
+|+.+.++++++|+++|||||.++. |+|++||||+|+++ ++.||||+|||+|+||||||+|+++++|++++++|++
T Consensus 378 ~~~~~~~~~~l~~ia~~~~Ip~Q~~~~gr~d~~~GgTig~~~-a~~Gi~tvdiGiP~l~MHS~~E~~~~~Di~~~~~l~~ 456 (461)
T 2glj_A 378 NDANPEYIAELRRILSKESVNWQTAELGKVDQGGGGTIAYIL-AEYGMQVIDCGVALLNMHAPWEISSKADIYETKNGYS 456 (461)
T ss_dssp CCCCHHHHHHHHHHHHHTCCCEEECCSSSSSSSCCCCTHHHH-HTTTCBCCBBCCEEESTTSSSEEEEHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHcCCCeEEEeeeccCCCCcccHHHHH-hCCCCCEEEEchhhcccchHHHHhhHHHHHHHHHHHH
Confidence 4899999999999999999999988 99999999999998 5899999999999999999999999999999999999
Q ss_pred HHHh
Q 012182 453 AFYE 456 (469)
Q Consensus 453 af~~ 456 (469)
+||+
T Consensus 457 af~~ 460 (461)
T 2glj_A 457 AFLN 460 (461)
T ss_dssp TTSC
T ss_pred HHHh
Confidence 9985
No 5
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=100.00 E-value=2.5e-90 Score=730.41 Aligned_cols=392 Identities=21% Similarity=0.283 Sum_probs=310.0
Q ss_pred ccCCCCCccccccccccchHHHHHHHHHHHhcCCChHHHHHHHHHHHHHCCCcccccCCcccccCCCeEEEEeCCcEEEE
Q 012182 39 RPRTLHNFSTSGIAQSSSSSSIVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVA 118 (469)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~FL~~spT~~hav~~~~~~L~~~GF~~L~e~~~W~l~~g~kyf~~r~~s~iiA 118 (469)
+++++|+ .+++.+..++++++++|++||++||||||||++++++|+++||++|+|++. ++||+|||++|++++|+|
T Consensus 2 ~~~~~w~--~~~~~~~~~~~~~~~~~~~fl~~spT~~hav~~~~~~l~~~Gf~~l~e~~~--l~~g~~~~~~r~g~~i~a 77 (458)
T 1y7e_A 2 KKQNPWI--YLNEEEKNQILNFSESYKKFISKFKTEREVTAYALDKAKKLGFINAEEKKN--LMPGDKIFYTCREKSVAF 77 (458)
T ss_dssp --CCGGG--GCCHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHTTTCEESTTCCC--CCTTCEEECBCSSSCBCC
T ss_pred CcCchhh--cCCHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCcccccccc--cCCCCeEEEECCCCEEEE
Confidence 5789999 676666677888999999999999999999999999999999999999987 899999999999999999
Q ss_pred EEeCCcC--c-----------c---------------------------------------cEEEEEcCCCcEEEEEe--
Q 012182 119 FAVGQKY--S-----------V---------------------------------------GRVIVRGSDGSFLHKLV-- 144 (469)
Q Consensus 119 f~vG~~~--~-----------~---------------------------------------GrV~~k~~~g~~~~~lv-- 144 (469)
|.+|+++ . | |||+++ +|+....+|
T Consensus 78 ~~~G~~~~~~g~~ii~AH~Dspgl~VK~~~~i~~~G~l~l~~~~yGG~~~~~w~~r~l~i~Grv~~~--~g~~~~~~ig~ 155 (458)
T 1y7e_A 78 AIIGKNPIEDGMNFIVSHTDSPRLDAKPSPISEENELTFIKTNYYGGIKKYQWLSTPLSIRGVVFLK--NGEKVEINIGD 155 (458)
T ss_dssp EECCSSCGGGCCEECCCBCCCCBCCCCSSCCEEETTEEEECCCCBSSCCGGGGTTCCEEEEEEEECT--TCCEEEEEESS
T ss_pred EEeCCCCCCCCcEEEEEccCcCCeEEecCCccCCCCeEEEEeeccCCeehhhhcCCEEEEEEEEEec--CCCEEEEEEec
Confidence 9999742 1 1 999987 456666666
Q ss_pred eeCCCeEeecccccccccc-ccc-CCCCCCccccccceeeccCccccCCccccCCCCCCccCChhHHHHHHHHHhCCCCC
Q 012182 145 KVKRPLLRVPTLAIHLDRT-VNK-DGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTD 222 (469)
Q Consensus 145 ~~~~Pv~~Ip~LaiHL~~~-~~~-~~~~~n~~~~l~piig~~~~~~~~~~~~~~~~~~~~~~h~~~ll~~la~~~gV~~g 222 (469)
+.++||++||+|||||+++ +++ ++++++++++|+|++|..+... ++ ..+|+..|++++++++||++|
T Consensus 156 ~~~~pi~~Ip~LaiHl~~~~~~~~~~~~~~~~~~l~~~ig~~~~~~-------ee----~~~~~~~ll~~l~~~~GI~~g 224 (458)
T 1y7e_A 156 NENDPVFVIPDILPHLDRKIQRNKKSDEIVEGENLKILIGSLPIET-------KE----KNKVKLATLQLIKEKYKIEEE 224 (458)
T ss_dssp STTCCCBCCCCCC--------------------CCCEEEECCCCSC-------SS----SCHHHHHHHHHHHHHHCCCTT
T ss_pred cCCCceeccCCcCcccCchhhcccccccCCCccceEEEEecCcCch-------hh----hhhHHHHHHHHHHHHcCCCcc
Confidence 8899999999999999988 663 3478999999999999865211 00 134678899999999999999
Q ss_pred ceeEEEEEeeecCCccccCCCCceeeeccccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCC
Q 012182 223 DIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGA 302 (469)
Q Consensus 223 Div~~dl~l~d~~~~~~~Gl~~e~I~~~~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~gA~s 302 (469)
|+++|||++|+.++++.+|++++||.|++||||+|||++++||+++++. .+.+.++++||||||||+|++||++
T Consensus 225 D~v~~dL~l~~~~~~~~~G~~~~~I~s~~lDdr~~~~~~l~al~~~~~~------~~~~~~~~~~d~EEVGs~ga~ga~s 298 (458)
T 1y7e_A 225 DFVSSEIEIVPAGTAKDVGFDKALIGAYGQDDKICVFTSLESIFDLEET------PNKTAICFLVDKEEIGSTGSTGLDS 298 (458)
T ss_dssp TTSSSEEEEEECSCCEEETTTTCEEEESSHHHHHHHHHHHHHHSSSSCC------CSSCEECCCBCSTTC--------CT
T ss_pred cEEEeeeeeecccCeEEecCCCCeEEEecCccHHHHHHHHHHHHhhhcc------CCceEEEEEEcccccCcccchhhcc
Confidence 9999999999999999999999999999999999999999999987521 3457899999999999999999999
Q ss_pred cchHHHHHHHHhc-c-cccCCchhhhhhhccCceEEEEecCCCCCCCCCccccCCCCCcCCCCceEEEc--CCCCccc--
Q 012182 303 PTMFQAIRRIVGS-L-AHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHN--ANQRYAT-- 376 (469)
Q Consensus 303 ~~~~dil~ri~~~-~-~~~~~~~~~~~~~~~~s~~IS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~--~~~~y~t-- 376 (469)
.|++++|+||+.+ . +. .+.+.+++++++|++||+||+||.|||||++++++|.+.||+||+||.+ ++++|++
T Consensus 299 ~~l~~~l~ri~~~~~~~~--~~~~~~~~~~~~S~~is~Dv~ha~dPn~~~~~~~~~~~~lg~G~vIk~~d~~~~~y~t~~ 376 (458)
T 1y7e_A 299 RYLEYFVSDMIFKIKKSE--YNNLHVQKALWNSKSISADVCAAINPLFSSVHDEQNAPQLGYGIPIMKYTGHGGKSMASD 376 (458)
T ss_dssp THHHHHHHHHHHHHSSTT--CCTHHHHHHHHHCEEEECCCEECCCC-------CTTSCCTTSCEEEEEEC----------
T ss_pred chHHHHHHHHHHhhccCC--cchHHHHHHHhcceEEEEecccccCCCCcccccccCCcccCCCcEEEEEcCCCCcccccc
Confidence 9999999999976 4 21 1367899999999999999999999999999999999999999999963 6888865
Q ss_pred -CHHHHHHHHHHHHHCCCCEeEEEe-ecCCCCCCChHHHHhcCCCCcEEEechhhccccchhhhcCHHHHHHHHHHHHHH
Q 012182 377 -SGVTAFLFKEIAKLHNLPTQEFVV-RNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAF 454 (469)
Q Consensus 377 -~~~~~~~l~~ia~~~~Ip~Q~~v~-r~D~~gGgTig~i~~s~~Gi~tidIGiP~r~MHS~~E~~~~~Dv~~~~~ll~af 454 (469)
|+.+.++++++|+++|||||.++. |||++||||+|+++ ++.||||+|||+|+|||||++|+++++|++++++|+++|
T Consensus 377 ~~~~~~~~l~~~a~~~~Ip~Q~~~~~r~d~~~GgT~~~~~-a~~Gi~tvdiGiP~~~mHS~~E~~~~~Di~~~~~ll~af 455 (458)
T 1y7e_A 377 ADAELVSYIRQLLNKNNIAWQVATLGKVEEGGGGTVAKFL-AGYGIRTIDMGPAVISMHSPMEITSKFDLYNAYLAYKAF 455 (458)
T ss_dssp -CHHHHHHHHHHHHHHTCCEEEEEECC-----CHHHHHHH-HHHTCEEEEECCEEBSTTSSSEEEEHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEeeccCCCCcCcHHHHH-hCCCCCEEEEchhhcccchHHHHhhHHHHHHHHHHHHHH
Confidence 899999999999999999999999 99999999999888 589999999999999999999999999999999999999
Q ss_pred Hh
Q 012182 455 YE 456 (469)
Q Consensus 455 ~~ 456 (469)
++
T Consensus 456 ~~ 457 (458)
T 1y7e_A 456 YR 457 (458)
T ss_dssp TT
T ss_pred Hh
Confidence 86
No 6
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.1e-91 Score=735.56 Aligned_cols=368 Identities=42% Similarity=0.684 Sum_probs=302.0
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHHHCCCcccccCCcccccCCCeEEEEeCCcEEEEEEeCCcCc---c---------
Q 012182 60 IVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYS---V--------- 127 (469)
Q Consensus 60 ~a~~~~~FL~~spT~~hav~~~~~~L~~~GF~~L~e~~~W~l~~g~kyf~~r~~s~iiAf~vG~~~~---~--------- 127 (469)
++++|++||++||||||||++++++|+++||++|+|++.|+++||+|||++|++++||||.+|+++. +
T Consensus 4 ~~~~~~~fl~~~~t~~h~v~~~~~~l~~~Gf~~l~e~~~w~l~~g~k~~~~~~~g~lia~~~G~~~~~~~~~~ii~AH~D 83 (428)
T 2ijz_A 4 LNQGLIDFLKASPTPFHATASLARRLEAAGYRRLDERDAWHTETGGRYYVTRNDSSLIAIRLGRRSPLESGFRLVGAHTD 83 (428)
T ss_dssp ----CCCSSTTTHHHHHHHCCSHHHHHHHHHHHSCC--------CCCCEECTTTTCCEEEECC--CCSTTCCEEEECBCC
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCeEcccccccccCCCCEEEEECCCCEEEEEEECCcCCCCCCcEEEEEcCC
Confidence 6899999999999999999999999999999999999999999999999999989999999997621 1
Q ss_pred -----------------------------------------cEEEEEcCCCcEEEEEeeeCCCeEeeccccccccccccc
Q 012182 128 -----------------------------------------GRVIVRGSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNK 166 (469)
Q Consensus 128 -----------------------------------------GrV~~k~~~g~~~~~lv~~~~Pv~~Ip~LaiHL~~~~~~ 166 (469)
|||+++++ |+++.+||+.++|+++||+|||||+++++
T Consensus 84 spgl~Vk~~~~i~~~G~l~~~v~~yGG~~~~~W~dr~l~lagrV~v~~~-~~~~~~l~~~~~~~~~I~~laiHl~~~~~- 161 (428)
T 2ijz_A 84 SPCLRVKPNPEIARNGFLQLGVEVYGGALFAPWFDRDLSLAGRVTFRAN-GKLESRLVDFRKAIAVIPNLNIHLNRAAN- 161 (428)
T ss_dssp CSEEEEEEEEEEEETTEEEEEEEEESCCCSTTSSSCCEEEEEEEETTTE-EEEECCSCCCBCCCCCSSCCC---------
T ss_pred cCCeEEecCCcccCCCEEEEeeEECCCeecccccCcccccCcEEEEECC-CeeeeeccccCCceEEEeCCCcccCchhh-
Confidence 89888754 46777899999999999999999999877
Q ss_pred CCCCCCccccccceeeccCccccCCccccCCCCCCccCChhHHHHHHHHHhCCCCCceeEEEEEeeecCCccccCCCCce
Q 012182 167 DGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEF 246 (469)
Q Consensus 167 ~~~~~n~~~~l~piig~~~~~~~~~~~~~~~~~~~~~~h~~~ll~~la~~~gV~~gDiv~~dl~l~d~~~~~~~Gl~~e~ 246 (469)
+++++|+|++|+|++|..+.++ +++|+..|++++++++||++||+++|||+++|.++++.+|++++|
T Consensus 162 ~~~~~~~~~~l~~~ig~~~~~~-------------~~~~~~~~~~~~a~~~GI~~gD~v~~dL~~~~~~~~~~~G~~~~~ 228 (428)
T 2ijz_A 162 EGWPINAQNELPPIIAQLAPGE-------------AADFRLLLDEQLLREHGITADVVLDYELSFYDTQSAAVVGLNDEF 228 (428)
T ss_dssp ---CCCCSTTSCCEEECCCSCC-------------------------------CCCCCCCSCCTTCEEECCSCCCCCSSS
T ss_pred cccCCCccCceEEEEecCCccc-------------ccchhhHHHHHHHHHcCCCccceEEEEeeecCCCceEEeccCCCe
Confidence 6689999999999999865210 124556799999999999999999999999999999999999999
Q ss_pred eeeccccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCcchHHHHHHHHhcccccCCchhhh
Q 012182 247 IFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSF 326 (469)
Q Consensus 247 I~~~~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~gA~s~~~~dil~ri~~~~~~~~~~~~~~ 326 (469)
|.|++||||+|||+++++|++++ . .. +.++++||||||||+|++||+|.|+|++|+||..+ .+.+
T Consensus 229 I~s~~lDdr~~~~~~l~al~~~~-~------~~-~~v~~~fd~EEVGs~ga~gA~s~~~~~~l~ri~~~-------~~~~ 293 (428)
T 2ijz_A 229 IAGARLDNLLSCHAGLEALLNAE-G------DE-NCILVCTDHEEVGSCSHCGADGPFLEQVLRRLLPE-------GDAF 293 (428)
T ss_dssp SSCCCSSCSSTTTTTTTHHHHTT-S------CS-SSCEEEECBSCTTTTCHHHHSSCCTTTSCCSSSSS-------SSSS
T ss_pred EEeecCccHHHHHHHHHHHHhcc-c------CC-ceEEEEEeccccCccchhhhhccccHHHHHHhhhh-------hhHH
Confidence 99999999999999999999874 1 12 23455559999999999999999999999999854 3578
Q ss_pred hhhccCceEEEEecCCCCCCCCCccccCCCCCcCCCCceEEEcCCCCcccCHHHHHHHHHHHHHCCCCEeEEEeecCCCC
Q 012182 327 ECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGC 406 (469)
Q Consensus 327 ~~~~~~s~~IS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~v~r~D~~g 406 (469)
++++++|++||+||+||.||||+++|+++|.+.||+||+||++++|+|++|+.+.++++++|+++|||||.++.|||.+|
T Consensus 294 ~~~~~~s~~is~Dv~ha~~Pn~~~~~~~~~~~~lg~G~vIk~~~~~~~~~~~~~~~~l~~~a~~~~Ip~Q~~~~~~d~~g 373 (428)
T 2ijz_A 294 SRAIQRSLLVSADNAHGVHPNYADRHDANHGPALNGGPVIKINSNQRYATNSETAGFFRHLCQDSEVPVQSFVTRSDMGC 373 (428)
T ss_dssp TTTTTSCCEEEECCCCCCCSSCGGGCCSSCCCSSSCCCBCCCCSSSCCSCCHHHHTTTTHHHHHTCCCCCBCCCCSSCCC
T ss_pred HhhhhcCEEEEEecccccCCCCcccccccCCcccCCCcEEEEECCCCCCCCHHHHHHHHHHHHHcCCCeEEEEEeCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHhcCCCCcEEEechhhccccchhhhcCHHHHHHHHHHHHHHHhh
Q 012182 407 GSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYES 457 (469)
Q Consensus 407 GgTig~i~~s~~Gi~tidIGiP~r~MHS~~E~~~~~Dv~~~~~ll~af~~~ 457 (469)
|||+|+|++++.||||+|||+|+|||||++|+++++|++++++|+++|+++
T Consensus 374 Gsd~g~i~~~~~Gi~tvdiGip~~~mHS~~E~~~~~D~~~~~~ll~af~~~ 424 (428)
T 2ijz_A 374 GSTIGPITASQVGVRTVDIGLPTFAMHSIRELAGSHDLAHLVKVLGAFYAS 424 (428)
T ss_dssp CCCCSTTTGGGGSCCEEEECCCCCSCSSSSCCCCSSHHHHHHTTHHHHTTC
T ss_pred cchHHHHHHhCCCCCEEEEchhhcccchHHHHhhHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999986
No 7
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=100.00 E-value=5.8e-47 Score=388.58 Aligned_cols=233 Identities=21% Similarity=0.165 Sum_probs=198.1
Q ss_pred Eeeccccccccccc-ccCCCCCCccccccceeeccCccccCCccccCCCCCCccCChhHHHHHHHHHhCCCCCceeEEEE
Q 012182 151 LRVPTLAIHLDRTV-NKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIEL 229 (469)
Q Consensus 151 ~~Ip~LaiHL~~~~-~~~~~~~n~~~~l~piig~~~~~~~~~~~~~~~~~~~~~~h~~~ll~~la~~~gV~~gDiv~~dl 229 (469)
++|+..+||+.++. +++ +..+.++|++++|..+++ .++++||++||+++||+
T Consensus 117 Gvi~~~~~H~~~~~~~~~--~~~~~~~l~iD~g~~s~e-------------------------e~~~~GI~~Gd~v~~d~ 169 (354)
T 2vpu_A 117 GVVGVLPPHLRRGQEDKG--SKIDWDQIVVDVGASSKE-------------------------EAEEMGFRVGTVGEFAP 169 (354)
T ss_dssp EEECCCCSTTC-----------CCGGGCCEECSCSSHH-------------------------HHHHTTCCTTCEEEECC
T ss_pred EEEcCCCccccCcccccc--cCCCcceEEEEecCCCHH-------------------------HHHhcCCCCCCEEEEee
Confidence 89999999998765 433 455668999999997753 57889999999999999
Q ss_pred EeeecCCccccCCCCceeeeccccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCcchHHHH
Q 012182 230 NICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAI 309 (469)
Q Consensus 230 ~l~d~~~~~~~Gl~~e~I~~~~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~gA~s~~~~dil 309 (469)
.+++ ++++||.|++||||+|||+++++|+++++ .+.+.+++|+||||||+||++||++.+.|
T Consensus 170 ~~~~--------~~~~~i~s~~lDnr~g~~~~l~~l~~l~~-------~~~~v~~~ft~qEEVG~~ga~~aa~~i~p--- 231 (354)
T 2vpu_A 170 NFTR--------LNEHRFATPYLDDRICLYAMIEAARQLGD-------HEADIYIVGSVQEEVGLRGARVASYAINP--- 231 (354)
T ss_dssp CCEE--------CSSSEEECTTHHHHHHHHHHHHHHHHCCC-------CSSEEEEEECSCCTTTSHHHHHHHHHHCC---
T ss_pred EEEE--------eCCceEEEecCccHHHHHHHHHHHHHhhc-------CCCeEEEEEECCcccCccchhhhhcccCC---
Confidence 9887 36789999999999999999999998853 34568899999999999999999877655
Q ss_pred HHHHhcccccCCchhhhhhhccCceEEEEecCCCCCCCCCccccCCCCCcCCCCceEEEcCCCCcccCHHHHHHHHHHHH
Q 012182 310 RRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAK 389 (469)
Q Consensus 310 ~ri~~~~~~~~~~~~~~~~~~~~s~~IS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~ 389 (469)
+++||+||+||.||+| + ..+.+.||+||+++ +++.+|+.+.+.++++|+
T Consensus 232 -----------------------d~~i~~Dv~~a~dp~~-~---~~~~~~lg~Gpv~d----~~~~~~~~l~~~l~~~a~ 280 (354)
T 2vpu_A 232 -----------------------EVGIAMDVTFAKQPHD-K---GKIVPELGKGPVMD----VGPNINPKLRAFADEVAK 280 (354)
T ss_dssp -----------------------SEEEEEEEEECCCTTS-T---TCCCCCTTSCCEEE----ESTTSCHHHHHHHHHHHH
T ss_pred -----------------------CEEEEecccccCCCCc-c---cccCceECCcceEc----CCCCCCHHHHHHHHHHHH
Confidence 5799999999999998 2 34579999999886 358899999999999999
Q ss_pred HCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEechhhccccchhhhcCHHHHHHHHHHHHHHHhhcccc
Q 012182 390 LHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSI 461 (469)
Q Consensus 390 ~~~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tidIGiP~r~MHS~~E~~~~~Dv~~~~~ll~af~~~~~~~ 461 (469)
++|||||.++. +..||+++++++.++.||||++||+|+|||||++|+++++|++++++++.+|++++...
T Consensus 281 ~~gIp~q~~~~--~g~gGtDa~~i~~a~~Gipt~~Igvp~~~~Hs~~E~~~~~D~~~~~~ll~~~l~~l~~~ 350 (354)
T 2vpu_A 281 KYEIPLQVEPS--PRPTGTDANVMQINKEGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELKPM 350 (354)
T ss_dssp HTTCCCEEEEC--CSCCSSTHHHHHTSTTCCEEEEEEEEEBSTTSTTCEEEHHHHHHHHHHHHHHHHHCCCC
T ss_pred HcCCCcEEEeC--CCCCccHHHHHHHhcCCCCEEEECcccccCcCcceEeeHHHHHHHHHHHHHHHHhccHh
Confidence 99999999873 12256668899999999999999999999999999999999999999999999988654
No 8
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=100.00 E-value=1e-45 Score=379.46 Aligned_cols=233 Identities=12% Similarity=0.035 Sum_probs=189.3
Q ss_pred EeecccccccccccccCCCCCCccccccceeeccCccccCCccccCCCCCCccCChhHHHHHHHHHhCCCCCceeEEEEE
Q 012182 151 LRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIELN 230 (469)
Q Consensus 151 ~~Ip~LaiHL~~~~~~~~~~~n~~~~l~piig~~~~~~~~~~~~~~~~~~~~~~h~~~ll~~la~~~gV~~gDiv~~dl~ 230 (469)
++|...+||+.++.+++ +..+.++|++++|..+++ .++++||++||+|+||..
T Consensus 114 Gvig~~~~H~~~~~~~~--~~~~~~~~~iD~g~~s~e-------------------------e~~~~GI~~Gd~v~~d~~ 166 (355)
T 3kl9_A 114 VISGSVPPHLTRGKGGP--TMPAIADIVFDGGFADKA-------------------------EAESFGIRPGDTIVPDSS 166 (355)
T ss_dssp EEEC-----------------CCGGGSCEECCCSSHH-------------------------HHHHTTCCTTCEEEECCC
T ss_pred EEEeCccccccChhhcc--CCCChhhEEEEeccCCHH-------------------------HHHHcCCCCCCEEEeccc
Confidence 88999999998765433 555678899999997753 578999999999999987
Q ss_pred eeecCCccccCCCCceeeeccccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCcchHHHHH
Q 012182 231 ICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIR 310 (469)
Q Consensus 231 l~d~~~~~~~Gl~~e~I~~~~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~gA~s~~~~dil~ 310 (469)
+.. +| +++||.|++||||+|||+++++|+++++. +.+.+.+++|++|||||+||+++|++.+.|
T Consensus 167 ~~~------~~-~~~~i~s~~lDnr~g~~~~l~~l~~l~~~-----~~~~~v~~~ft~qEEvG~~Ga~~a~~~~~p---- 230 (355)
T 3kl9_A 167 AIL------TA-NEKNIISKAWDNRYGVLMVSELAEALSGQ-----KLGNELYLGSNVQEEVGLRGAHTSTTKFDP---- 230 (355)
T ss_dssp CEE------CT-TSSEEEESCHHHHHHHHHHHHHHHHHSSC-----CCSSEEEEEEESCCTTTSHHHHHHHHHHCC----
T ss_pred eEE------ec-CCCEEEeeccccHHHHHHHHHHHHHhhhc-----CCCceEEEEEECccccCcchhHHHHhccCC----
Confidence 544 33 56899999999999999999999998642 245678899999999999999999877644
Q ss_pred HHHhcccccCCchhhhhhhccCceEEEEecCCCCCCCCCccccCCCCCcCCCCceEEEcCCCCcccCHHHHHHHHHHHHH
Q 012182 311 RIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKL 390 (469)
Q Consensus 311 ri~~~~~~~~~~~~~~~~~~~~s~~IS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~ 390 (469)
+++|++||+|+.|| |+. .++||+||+|+++++. +.+|+.+.++++++|++
T Consensus 231 ----------------------d~~i~~D~~~a~d~--p~~-----~~~lg~G~~i~~~d~~-~~~~~~l~~~l~~~a~~ 280 (355)
T 3kl9_A 231 ----------------------EVFLAVDCSPAGDV--YGG-----QGKIGDGTLIRFYDPG-HLLLPGMKDFLLTTAEE 280 (355)
T ss_dssp ----------------------SEEEEEEEEECCGG--GTS-----SCCTTSCEEEEEEETT-EECCHHHHHHHHHHHHH
T ss_pred ----------------------CEEEEecCccCCCC--CCc-----ccccCCCcEEEEecCC-CCCCHHHHHHHHHHHHH
Confidence 57999999999984 221 5789999999999884 89999999999999999
Q ss_pred CCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEechhhccccchhhhcCHHHHHHHHHHHHHHHhhccc
Q 012182 391 HNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSS 460 (469)
Q Consensus 391 ~~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tidIGiP~r~MHS~~E~~~~~Dv~~~~~ll~af~~~~~~ 460 (469)
+|||||. +.+ .||+++++++.++.||||++||+|+|||||++|+++.+|++++++|+.+|++++..
T Consensus 281 ~gIp~q~-~~~---ggGtDa~~i~~a~~Gipt~~igvp~~~~Hs~~E~~~~~Di~~~~~ll~~~l~~l~~ 346 (355)
T 3kl9_A 281 AGIKYQY-YCG---KGGTDAGAAHLKNGGVPSTTIGVCARYIHSHQTLYAMDDFLEAQAFLQALVKKLDR 346 (355)
T ss_dssp TTCCEEE-EEC---SSCCTHHHHTTSTTCCCEEEEEEEEBSCSSSCEEEEHHHHHHHHHHHHHHHHTCCH
T ss_pred cCCCEEE-ECC---CcchHHHHHHHhCCCCCEEEEccCcCCCCCcceEeeHHHHHHHHHHHHHHHHHhCH
Confidence 9999999 643 35555789988899999999999999999999999999999999999999998864
No 9
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=100.00 E-value=1.2e-45 Score=377.27 Aligned_cols=227 Identities=15% Similarity=0.088 Sum_probs=197.0
Q ss_pred EeecccccccccccccCCCCCCccccccceeeccCccccCCccccCCCCCCccCChhHHHHHHHHHhCCCCCceeEEEEE
Q 012182 151 LRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIELN 230 (469)
Q Consensus 151 ~~Ip~LaiHL~~~~~~~~~~~n~~~~l~piig~~~~~~~~~~~~~~~~~~~~~~h~~~ll~~la~~~gV~~gDiv~~dl~ 230 (469)
++|...+||+.++.+++ +..+.++|++++|..+++ .++++ |++||+|+||..
T Consensus 115 Gvig~~~~H~~~~~~~~--~~~~~~~l~iD~g~~s~e-------------------------e~~~~-I~vGd~v~~~~~ 166 (343)
T 3isx_A 115 GVVGMEGETTEERQENV--RKLSFDKLFIDIGANSRE-------------------------EAQKM-CPIGSFGVYDSG 166 (343)
T ss_dssp EEEEECCCSHHHHHHHH--HTCCGGGEEEECSCSSHH-------------------------HHHHH-SCTTCEEEESCC
T ss_pred EEEecccccccChhhcc--cCCCcceEEEEeCCCCHH-------------------------HHHhc-CCCCCEEEecCc
Confidence 88999999998665433 445568899999997753 46778 999999999976
Q ss_pred eeecCCccccCCCCceeeeccccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCcchHHHHH
Q 012182 231 ICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIR 310 (469)
Q Consensus 231 l~d~~~~~~~Gl~~e~I~~~~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~gA~s~~~~dil~ 310 (469)
+.. + + +||.|++||||+|||+++++|++++. +.+.+++|++|||||+||+++|++.+.|
T Consensus 167 ~~~------~--~-~~i~s~~lDdR~g~~~~l~~l~~l~~--------~~~~~~~ft~qEEVG~~Ga~~aa~~i~p---- 225 (343)
T 3isx_A 167 FVE------V--S-GKYVSKAMDDRIGCAVIVEVFKRIKP--------AVTLYGVFSVQEEVGLVGASVAGYGVPA---- 225 (343)
T ss_dssp CEE------E--T-TEEEESCHHHHHHHHHHHHHHHHCCC--------SSEEEEEEECCCCTTSCCSTTTGGGCCC----
T ss_pred eEE------e--c-cEEEeccCccHHHHHHHHHHHHhccC--------CCeEEEEEECCcccCchhHHHHhhcCCC----
Confidence 544 2 2 59999999999999999999998742 3468899999999999999999998766
Q ss_pred HHHhcccccCCchhhhhhhccCceEEEEecCCCCC-CCCCccccCCCCCcCCCCceEEEcCCCCcccCHHHHHHHHHHHH
Q 012182 311 RIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVH-PNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAK 389 (469)
Q Consensus 311 ri~~~~~~~~~~~~~~~~~~~~s~~IS~DvahA~~-Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~ 389 (469)
+++||+||+||.| |++++ .+.+.||+||+|+++++. +.+|+.+.++++++|+
T Consensus 226 ----------------------d~~i~vDv~~a~d~p~~~~----~~~~~lg~GpvI~~~d~~-~~~d~~l~~~l~~~A~ 278 (343)
T 3isx_A 226 ----------------------DEAIAIDVTDSADTPKAIK----RHAMRLSGGPALKVKDRA-SISSKRILENLIEIAE 278 (343)
T ss_dssp ----------------------SEEEEEEEEECCCSTTCCC----TTCCCTTSCCEEECBTTC-CHHHHHHHHHHHHHHH
T ss_pred ----------------------CEEEEEeCcCCCCCCCccc----ccccccCCCcEEEEcCCC-CCCCHHHHHHHHHHHH
Confidence 4699999999998 88863 347899999999999984 8999999999999999
Q ss_pred HCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEechhhccccchhhhcCHHHHHHHHHHHHHHHh
Q 012182 390 LHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYE 456 (469)
Q Consensus 390 ~~~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tidIGiP~r~MHS~~E~~~~~Dv~~~~~ll~af~~ 456 (469)
++|||||.++.+ +||+++++++.++.||||++||+|+|||||++|+++++|++++++|+.+|++
T Consensus 279 ~~gIp~Q~~v~~---ggGTDa~~i~~a~~Gipt~~Igvp~r~~Hs~~E~~~~~Di~~~~~ll~~~l~ 342 (343)
T 3isx_A 279 KFDIKYQMEVLT---FGGTNAMGYQRTREGIPSATVSIPTRYVHSPSEMIAPDDVEATVDLLIRYLG 342 (343)
T ss_dssp HTTCCCEECCCB---CCCSSHHHHHHHTSSCCEEEEEEEEBSTTSTTEEECHHHHHHHHHHHHHHHC
T ss_pred HCCCCeEEecCC---CCchHHHHHHHhcCCCCEEEEccccccccchhhEecHHHHHHHHHHHHHHHh
Confidence 999999998753 3566688999999999999999999999999999999999999999999985
No 10
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=100.00 E-value=6.5e-33 Score=281.08 Aligned_cols=231 Identities=14% Similarity=0.087 Sum_probs=188.1
Q ss_pred ccccccccccccCCCCCCccccccceeeccCccccCCccccCCCCCCccCChhHHHHHHHHHhCCCCCceeEEEEEeeec
Q 012182 155 TLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIELNICDT 234 (469)
Q Consensus 155 ~LaiHL~~~~~~~~~~~n~~~~l~piig~~~~~~~~~~~~~~~~~~~~~~h~~~ll~~la~~~gV~~gDiv~~dl~l~d~ 234 (469)
.++||+. +.+ .+.+++++|.+++|..+. .+++++||++||+++++..+..
T Consensus 108 ~~~~h~~-~~~---~~~~~~~~l~id~G~~s~-------------------------~~~~~~gi~~g~~i~~~~~~~~- 157 (348)
T 1ylo_A 108 CKIPGLL-DGD---RQGNDVSAMRVDIGARTY-------------------------DEVMQAGIRPGDRVTFDTTFQV- 157 (348)
T ss_dssp CEEEEEE-EEE---EETTEEEEEEEECSCCSH-------------------------HHHHHTTCCTTCEEEECCCCEE-
T ss_pred CCCcchh-hhh---ccCCChhHEEEEecCCCH-------------------------HHHHHcCCCCCCEEEEccccEE-
Confidence 5789998 433 256788999999986432 2578899999999999975332
Q ss_pred CCccccCCCCceeeeccccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCcchHHHHHHHHh
Q 012182 235 QPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVG 314 (469)
Q Consensus 235 ~~~~~~Gl~~e~I~~~~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~gA~s~~~~dil~ri~~ 314 (469)
. .++++.|+++|||.||+++++++..+... ..+...++++|++||+|++|++++.+.
T Consensus 158 -----~--~~~~~~~~~~D~k~g~aa~l~al~~l~~~-----~~~~~~~~~~t~~EEvG~~Ga~~~~~~----------- 214 (348)
T 1ylo_A 158 -----L--PHQRVMGKAFDDRLSCYLLVTLLRELHDA-----ELPAEVWLVASSSEEVGLRGGQTATRA----------- 214 (348)
T ss_dssp -----E--TTTEEEETTHHHHHHHHHHHHHHHHHTTC-----CCSSEEEEEEESCCTTSSHHHHHHHHH-----------
T ss_pred -----e--cCCEEEecCcccHHHHHHHHHHHHHhhhc-----CCCceEEEEEEcccccchhHHHHhhcc-----------
Confidence 2 46789999999999999999999988642 123467799999999999999887543
Q ss_pred cccccCCchhhhhhhccCceEEEEecCCCCCCCCCccccCCCCCcCCCCceEEEcCCCCcccCHHHHHHHHHHHHHCCCC
Q 012182 315 SLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLP 394 (469)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~s~~IS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip 394 (469)
+.++++|++|++|+.+ +++.. ..+.+.+|+||+|+++++ ++.+|+.+.+.++++|+++|||
T Consensus 215 ---------------i~~~~~i~~D~~~~~~--~~~~~-~~~~~~~~~G~~i~~~~~-~~~~~~~l~~~~~~~a~~~gi~ 275 (348)
T 1ylo_A 215 ---------------VSPDVAIVLDTACWAK--NFDYG-AANHRQIGNGPMLVLSDK-SLIAPPKLTAWIETVAAEIGVP 275 (348)
T ss_dssp ---------------HCCSEEEEECCCCCSS--TTCCS-TTCCCCTTSCCEEEEECS-SCBCCHHHHHHHHHHHHHHTCC
T ss_pred ---------------cCCCEEEEEeccccCC--CCCCC-ccccccCCCCcEEEEeCC-CCCCCHHHHHHHHHHHHHcCCC
Confidence 2446899999999974 44432 245688999999999866 4889999999999999999999
Q ss_pred EeEEEeecCCCCCCChHHHHhcCCCCcEEEechhhccccchhhhcCHHHHHHHHHHHHHHHhhccc
Q 012182 395 TQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSS 460 (469)
Q Consensus 395 ~Q~~v~r~D~~gGgTig~i~~s~~Gi~tidIGiP~r~MHS~~E~~~~~Dv~~~~~ll~af~~~~~~ 460 (469)
||.++.. +||++++.++.++.||||+++|+|+++|||++|+++.+|++.+++++.+|+..+..
T Consensus 276 ~~~~~~~---~ggsDa~~~~~~~~gipt~~lg~~~~~~Hs~~E~~~~~d~~~~~~ll~~~~~~l~~ 338 (348)
T 1ylo_A 276 LQADMFS---NGGTDGGAVHLTGTGVPTLVMGPATRHGHCAASIADCRDILQMEQLLSALIQRLTR 338 (348)
T ss_dssp CEEEECS---SCCCHHHHHHTSTTCCCEEEEECCCBSCSSSCEEEEHHHHHHHHHHHHHHHHTCCH
T ss_pred eEEeecC---CCcchHHHHHHhcCCCCEEEECcccCcCCCcceEeeHHHHHHHHHHHHHHHHHhhH
Confidence 9997642 34444667777789999999999999999999999999999999999999998753
No 11
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=100.00 E-value=3e-32 Score=276.55 Aligned_cols=227 Identities=20% Similarity=0.091 Sum_probs=184.5
Q ss_pred CeEeecccccccccccccCCCCCCccccccceeeccCccccCCccccCCCCCCccCChhHHHHHHHHHhCCCCCceeEEE
Q 012182 149 PLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIE 228 (469)
Q Consensus 149 Pv~~Ip~LaiHL~~~~~~~~~~~n~~~~l~piig~~~~~~~~~~~~~~~~~~~~~~h~~~ll~~la~~~gV~~gDiv~~d 228 (469)
..++|+.+++|+.++.++ .+.+++++|.+++|..+ + + |++||+++++
T Consensus 110 ~~G~i~~~~~h~~~~~~~--~~~~~~~~l~id~g~~~-e----------------------------e--i~~G~~~~~~ 156 (346)
T 1vho_A 110 ERGVIGMLAPHLQDSESR--KKVPTYDEIFVDLSLCE-R----------------------------G--VRVGDIAVID 156 (346)
T ss_dssp EEEETTCCCSCCCCHHHH--HTSCCTTCCEEEGGGSS-S----------------------------C--CCTTCEEEEC
T ss_pred EEEEEcCCCcccCchhhc--ccCCChhHeEEEeccch-h----------------------------c--CCCCCEEEEc
Confidence 559999999999887643 36778899999998643 1 1 8899999988
Q ss_pred EEeeecCCccccCCCCceeeeccccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCcchHHH
Q 012182 229 LNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQA 308 (469)
Q Consensus 229 l~l~d~~~~~~~Gl~~e~I~~~~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~gA~s~~~~di 308 (469)
..+. ..| +++.|+++|||.||+++++++..+... ..+...++++|+|||||++|+++++..
T Consensus 157 ~~~~------~~g---~~i~g~~~D~r~g~aa~l~al~~l~~~-----~~~~~~~~~~t~~EEvG~~Ga~~~~~~----- 217 (346)
T 1vho_A 157 QTAF------ETN---GKVVGKALDNRASCGVLVKVLEFLKRY-----DHPWDVYVVFSVQEETGCLGALTGAYE----- 217 (346)
T ss_dssp CCCE------EET---TEEEETTHHHHHHHHHHHHHHHHHTTC-----CCSSEEEEEEECTTSSSHHHHHHTTCC-----
T ss_pred cchh------hhc---CeEEeccCccHHHHHHHHHHHHHhhhc-----CCCceEEEEEECCcccchhhHHHHhcc-----
Confidence 7533 334 789999999999999999999988642 123467899999999999999987654
Q ss_pred HHHHHhcccccCCchhhhhhhccCceEEEEecCCCCCCCCCccccCCCCCcCCCCceEEEcCCCCcccCHHHHHHHHHHH
Q 012182 309 IRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIA 388 (469)
Q Consensus 309 l~ri~~~~~~~~~~~~~~~~~~~~s~~IS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia 388 (469)
+.++++|++|++|+.+ +++.+ .+.+|+||+|++ .+..|+.+.+.++++|
T Consensus 218 ---------------------i~~~~~i~~D~~~~~~--~~~~~----~~~~~~g~~i~~----~~~~~~~l~~~~~~~a 266 (346)
T 1vho_A 218 ---------------------INPDAAIVMDVTFASE--PPFSD----HIELGKGPVIGL----GPVVDRNLVQKIIEIA 266 (346)
T ss_dssp ---------------------CCCSEEEEEEEECCCC--TTSCC----CCCTTSCCEEEC----STTSCHHHHHHHHHHH
T ss_pred ---------------------cCCCEEEEeecccccC--CCCCc----ccccCCCceEEe----CCcCCHHHHHHHHHHH
Confidence 3557899999999974 44433 178999999998 4788999999999999
Q ss_pred HHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEechhhccccchhhhcCHHHHHHHHHHHHHHHhhccc
Q 012182 389 KLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSS 460 (469)
Q Consensus 389 ~~~~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tidIGiP~r~MHS~~E~~~~~Dv~~~~~ll~af~~~~~~ 460 (469)
++.|||+|..+.+ .+||++++.++.++.||||+++|+|+++|||++|+++.+|++.+++++.+|++++..
T Consensus 267 ~~~gi~~~~~~~~--g~ggsDa~~~~~~~~gipt~~lg~~~~~~Hs~~E~~~~~dl~~~~~ll~~~~~~~~~ 336 (346)
T 1vho_A 267 KKHNVSLQEEAVG--GRSGTETDFVQLVRNGVRTSLISIPLKYMHTPVEMVDPRDVEELARLLSLVAVELEV 336 (346)
T ss_dssp HHTTCCCEEESSC--CC----CTTHHHHHTTCEEEEEEEECBSTTSTTEEECHHHHHHHHHHHHHHHHHCC-
T ss_pred HHCCCCEEEEeCC--CCCCchHHHHHHhCCCCcEEEEehhhcccccHHHhcCHHHHHHHHHHHHHHHHHhhh
Confidence 9999999998641 014555677877789999999999999999999999999999999999999998754
No 12
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=100.00 E-value=4.2e-32 Score=276.78 Aligned_cols=235 Identities=17% Similarity=0.176 Sum_probs=184.3
Q ss_pred EeecccccccccccccCCCCCCccccccceeeccCccccCCccccCCCCCCccCChhHHHHHHHHHhCCCCCceeEEEEE
Q 012182 151 LRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIELN 230 (469)
Q Consensus 151 ~~Ip~LaiHL~~~~~~~~~~~n~~~~l~piig~~~~~~~~~~~~~~~~~~~~~~h~~~ll~~la~~~gV~~gDiv~~dl~ 230 (469)
++|+.++||+.++.++ .+.+++++|++++|..+. .+++++||.+||++++|..
T Consensus 115 g~i~~~~~h~~~~~~~--~~~~~~~~l~~d~g~~~~-------------------------~~~~~~gi~~Gd~v~~~~~ 167 (353)
T 1y0y_A 115 GVGASVPPHIQKPEDR--KKAPDWDQIFIDIGAESK-------------------------EEAEDMGVKIGTVITWDGR 167 (353)
T ss_dssp EEEEC---------------CCCGGGCEEECSCSSH-------------------------HHHHHTTCCTTCEEEECCC
T ss_pred EEEeCCCcccCchhhc--cCCCChHHeEEEeCCCCH-------------------------HHHHHcCCCCCCEEEeccC
Confidence 7799999999876543 478889999999997542 2688999999999999975
Q ss_pred eeecCCccccCCCCceeeeccccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCcchHHHHH
Q 012182 231 ICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIR 310 (469)
Q Consensus 231 l~d~~~~~~~Gl~~e~I~~~~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~gA~s~~~~dil~ 310 (469)
+. .+ ++++|.|+++||+.||++++++++.++. .....+++|+++||+|++|++.+..
T Consensus 168 ~~------~~--~~~~i~gra~D~k~g~a~~l~a~~~l~~-------~~~~i~~~~~~~EE~g~~G~~~~~~-------- 224 (353)
T 1y0y_A 168 LE------RL--GKHRFVSIAFDDRIAVYTILEVAKQLKD-------AKADVYFVATVQEEVGLRGARTSAF-------- 224 (353)
T ss_dssp CE------EE--TTTEEEETTHHHHHHHHHHHHHHHHCCS-------CSSEEEEEEESCCTTTSHHHHHHHH--------
T ss_pred cE------Ee--cCCeEEeccCccHHHHHHHHHHHHHhhc-------CCCeEEEEEECCcccchhHHHHHhh--------
Confidence 33 33 5789999999999999999999998752 2346789999999999998876531
Q ss_pred HHHhcccccCCchhhhhhhccCceEEEEecCCCC-CCCCCccccCCCCCcCCCCceEEEcCCCCcccCHHHHHHHHHHHH
Q 012182 311 RIVGSLAHEHVSETSFECTIRQSFLVSADMAHGV-HPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAK 389 (469)
Q Consensus 311 ri~~~~~~~~~~~~~~~~~~~~s~~IS~DvahA~-~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~ 389 (469)
.+.++++|++|++++. +|.+.+ ..+.+.||+||+|+++++ ++..++.+.+.++++|+
T Consensus 225 ------------------~~~~~~~i~~d~~~~~~~p~~~~---~~g~~~lg~G~~i~~~d~-~~~~~~~l~~~l~~~a~ 282 (353)
T 1y0y_A 225 ------------------GIEPDYGFAIDVTIAADIPGTPE---HKQVTHLGKGTAIKIMDR-SVICHPTIVRWLEELAK 282 (353)
T ss_dssp ------------------HHCCSEEEEEEEEECCCSTTCCG---GGCCCCTTSCEEEEEEET-TEECCHHHHHHHHHHHH
T ss_pred ------------------ccCCCEEEEEecccccCCCCCcc---ccCccccCCCcEEEEeCC-CCCCCHHHHHHHHHHHH
Confidence 1345789999999976 676642 334688999999998766 47889999999999999
Q ss_pred HCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEechhhccccchhhhcCHHHHHHHHHHHHHHHhhccc
Q 012182 390 LHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSS 460 (469)
Q Consensus 390 ~~~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tidIGiP~r~MHS~~E~~~~~Dv~~~~~ll~af~~~~~~ 460 (469)
+.|+|+|.... .++|++.++++.++.||||+++|+|.++|||+.|.++.+|++.+++++.+|+..+..
T Consensus 283 ~~gi~~~~~~~---~~ggsDa~~~~~~~~GiPtv~lg~~~~~~Hs~~E~v~~~dl~~~~~ll~~~l~~l~~ 350 (353)
T 1y0y_A 283 KHEIPYQLEIL---LGGGTDAGAIHLTKAGVPTGALSVPARYIHSNTEVVDERDVDATVELMTKALENIHE 350 (353)
T ss_dssp HTTCCEEEEEC---SSCCCTHHHHTTSTTCCCEEEEEEEEBSCSSSCEEEEHHHHHHHHHHHHHHHHHGGG
T ss_pred HcCCCEEEeec---CCCCchHHHHHHhCCCCcEEEEcccccccCCHHHhcCHHHHHHHHHHHHHHHHhhhh
Confidence 99999998653 134555677776778999999999999999999999999999999999999998754
No 13
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=100.00 E-value=8.2e-32 Score=274.46 Aligned_cols=228 Identities=15% Similarity=0.081 Sum_probs=158.9
Q ss_pred CeEeecc--cccccccccccCCCCCCccccccceeeccCccccCCccccCCCCCCccCChhHHHHHHHHHhCCCCCceeE
Q 012182 149 PLLRVPT--LAIHLDRTVNKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIAS 226 (469)
Q Consensus 149 Pv~~Ip~--LaiHL~~~~~~~~~~~n~~~~l~piig~~~~~~~~~~~~~~~~~~~~~~h~~~ll~~la~~~gV~~gDiv~ 226 (469)
..++||+ ++||+.++.+ . +++++++|+|+++..... +.+++++||++||+|+
T Consensus 114 ~~g~i~~~~~~~h~~~~~~-~--~~~~~~~l~~~id~g~~~-----------------------~~~~~~~gi~~gd~v~ 167 (349)
T 2gre_A 114 YTGTILMHQTSVHVYKDAG-E--AKRDEKNIEVRIDERVFS-----------------------ADEVRELGIEVGDFVS 167 (349)
T ss_dssp EEEEEECC----------------------CEEEESSCCCS-----------------------HHHHHHTTCCTTCEEE
T ss_pred EEEEEeCCCCCccccchhc-c--CCCCHHHceEEeccCCCC-----------------------HHHHHHcCCCCCCEEE
Confidence 4688999 9999988753 3 788999999998753211 1368899999999999
Q ss_pred EEEEeeecCCccccCCCCceeeeccccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCcchH
Q 012182 227 IELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMF 306 (469)
Q Consensus 227 ~dl~l~d~~~~~~~Gl~~e~I~~~~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~gA~s~~~~ 306 (469)
+|+.+.. +++++|.|+++||+.||++++++++.+.... . .....++++|+++||+|++|++.. .
T Consensus 168 ~~~~~~~--------~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~--~-~~~~~i~~~~~~~EE~G~~g~~~~--~--- 231 (349)
T 2gre_A 168 FDPRVQI--------TESGYIKSRHLDDKVSVAILLKLIKRLQDEN--V-TLPYTTHFLISNNEEIGYGGNSNI--P--- 231 (349)
T ss_dssp ECCCCEE--------CTTSEEEESCCTTHHHHHHHHHHHHHHHHHT--C-CCSEEEEEEEESCC----CCCCCC--C---
T ss_pred EccccEE--------ccCCeEEEeeccchHHHHHHHHHHHHHHhcc--C-CCCceEEEEEECcccCCchhhccc--c---
Confidence 9986443 2578999999999999999999998874210 0 123467789999999999998853 1
Q ss_pred HHHHHHHhcccccCCchhhhhhhccCceEEEEecCCCC-CCCCCccccCCCCCcCCCCceEEEcCCCCcccCHHHHHHHH
Q 012182 307 QAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGV-HPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFK 385 (469)
Q Consensus 307 dil~ri~~~~~~~~~~~~~~~~~~~~s~~IS~DvahA~-~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~ 385 (469)
+.++++|++|++++. +|++++ +|+.|+..++ ++.+++.+.+.++
T Consensus 232 -----------------------~~~~~~i~~D~~~~~~~p~~~~-----------~g~~i~~~~~-~~~~~~~l~~~l~ 276 (349)
T 2gre_A 232 -----------------------EETVEYLAVDMGALGDGQASDE-----------YTVSICAKDS-SGPYHYALRKHLV 276 (349)
T ss_dssp -----------------------TTEEEEEEECCCCCSCC--CCT-----------TSEEEEEEET-TEECCHHHHHHHH
T ss_pred -----------------------cCCCEEEEEecccccCCCCCCC-----------CceEEEEccC-CCCCCHHHHHHHH
Confidence 245789999999997 576542 5888887654 4678999999999
Q ss_pred HHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEechhhccccchhhhcCHHHHHHHHHHHHHHHhh
Q 012182 386 EIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYES 457 (469)
Q Consensus 386 ~ia~~~~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tidIGiP~r~MHS~~E~~~~~Dv~~~~~ll~af~~~ 457 (469)
++|+++|||+|.++.. .||+++++++.++.||||+.+|+|++|||| +|+++.+|++.+++++.+|+.+
T Consensus 277 ~~a~~~gi~~q~~~~~---ggGsDa~~~~~~~~GiPt~~lg~~~~~~Hs-~E~~~~~dl~~~~~ll~~~l~~ 344 (349)
T 2gre_A 277 ELAKTNHIEYKVDIYP---YYGSDASAAIRAGFDVKHALIGAGIDSSHA-FERTHESSIAHTEALVYAYVMS 344 (349)
T ss_dssp HHHHHHTCCEEEEECS---CC--------CCSSSCEEEEEEECCBSTTS-SEEEEHHHHHHHHHHHHHHHHS
T ss_pred HHHHHcCCCcEEeccC---CCCccHHHHHHhCCCCcEEEeccCcccccc-ceeccHHHHHHHHHHHHHHHhc
Confidence 9999999999996642 455557788888899999999999999999 9999999999999999999975
No 14
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.97 E-value=2.8e-30 Score=265.54 Aligned_cols=240 Identities=16% Similarity=0.113 Sum_probs=193.2
Q ss_pred eEeecccccccccccccCCCCCCccccccceeeccCccccCCccccCCCCCCccCChhHHHHHHHHHhCCCCCceeEEEE
Q 012182 150 LLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIEL 229 (469)
Q Consensus 150 v~~Ip~LaiHL~~~~~~~~~~~n~~~~l~piig~~~~~~~~~~~~~~~~~~~~~~h~~~ll~~la~~~gV~~gDiv~~dl 229 (469)
.++|+.++||+.++.+ ..+++++++|++++|..+. ..++++||.+||+|++|.
T Consensus 115 ~g~i~~~~~h~~~~~~--~~~~~~~~~l~id~g~~s~-------------------------~~~~~~gi~~Gd~v~~~~ 167 (373)
T 1vhe_A 115 TGVIGSKPPHILSPEA--RKKSVEIKDMFIDIGASSR-------------------------EEALEWGVLPGDMIVPHF 167 (373)
T ss_dssp EEEEECCCGGGSCTTT--TTSCCCGGGCEEECSCSSH-------------------------HHHHHTTCCTTCEEEECC
T ss_pred EEEEcCCCcccCchhh--ccCCCChhHeEEEecCCCH-------------------------HHHHHcCCCCCCEEEEcc
Confidence 4788999999977643 3588899999999987542 157789999999999996
Q ss_pred EeeecCCccccCCCCceeeeccccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCcchHHHH
Q 012182 230 NICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAI 309 (469)
Q Consensus 230 ~l~d~~~~~~~Gl~~e~I~~~~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~gA~s~~~~dil 309 (469)
. +..+| ++++|.|+++||+.||++++++++.+... .....++++|+++||+|++|++.+..
T Consensus 168 ~------~~~~~-~~~~i~gr~~D~k~g~a~~l~a~~~l~~~-----~~~~~v~~~~~~~EE~G~~G~~~~~~------- 228 (373)
T 1vhe_A 168 E------FTVMN-NEKFLLAKAWDNRIGCAIAIDVLRNLQNT-----DHPNIVYGVGTVQEEVGLRGAKTAAH------- 228 (373)
T ss_dssp C------CEECS-STTEEEETTHHHHHHHHHHHHHHHHHHTS-----CCSSEEEEEEESCCTTTSHHHHHHHH-------
T ss_pred c------cEEec-CCCeEEeccCccHHHHHHHHHHHHHHhhc-----CCCceEEEEEECCcccChhhHHHHhc-------
Confidence 4 34455 67899999999999999999999987642 13356789999999999998876521
Q ss_pred HHHHhcccccCCchhhhhhhccCceEEEEecCCCCCCCCCccccCCCCCcCCCCceEEEcCCCCcccCHHHHHHHHHHHH
Q 012182 310 RRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAK 389 (469)
Q Consensus 310 ~ri~~~~~~~~~~~~~~~~~~~~s~~IS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~ 389 (469)
.+.++++|++|++++.+ ++......+.+.||+||++++++.. +..++.+.+.++++|+
T Consensus 229 -------------------~~~~d~~i~~d~~~~~~--~~g~~~~~~~~~lg~G~~i~~~~~~-~~~~~~l~~~l~~~a~ 286 (373)
T 1vhe_A 229 -------------------TIQPDIAFGVDVGIAGD--TPGISEKEAQSKMGKGPQIIVYDAS-MVSHKGLRDAVVATAE 286 (373)
T ss_dssp -------------------HHCCSEEEEEEEEECCC--STTCCTTTCCCCTTSCCEEEEEETT-EECCHHHHHHHHHHHH
T ss_pred -------------------ccCCCEEEEEeccccCC--CCCCcccccccccCCCceEEEeCCC-CCCCHHHHHHHHHHHH
Confidence 13457899999998754 2332222456889999999987664 7889999999999999
Q ss_pred HCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEechhhccccchhhhcCHHHHHHHHHHHHHHHhhccc
Q 012182 390 LHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSS 460 (469)
Q Consensus 390 ~~~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tidIGiP~r~MHS~~E~~~~~Dv~~~~~ll~af~~~~~~ 460 (469)
+.|+|+|.+... .+|++.+.++.++.|||++++|+|.++|||+.|.++.+|++.+++++.+++..+..
T Consensus 287 ~~gi~~~~~~~~---~ggtDa~~~~~~~~GiPtv~lg~~~~~~Hs~~E~v~~~dl~~~~~ll~~~l~~l~~ 354 (373)
T 1vhe_A 287 EAGIPYQFDAIA---GGGTDSGAIHLTANGVPALSITIATRYIHTHAAMLHRDDYENAVKLITEVIKKLDR 354 (373)
T ss_dssp HHTCCCEEEEET---TCCCTHHHHTTSTTCCCEEEEEEEEBSTTSSCEEEEHHHHHHHHHHHHHHHHHCCH
T ss_pred HcCCCeEEecCC---CCCccHHHHHHhCCCCcEEEEccccccCCChhheecHHHHHHHHHHHHHHHHHhcH
Confidence 999999985542 34444667766778999999999999999999999999999999999999998764
No 15
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.96 E-value=2.3e-29 Score=255.35 Aligned_cols=233 Identities=15% Similarity=0.098 Sum_probs=169.0
Q ss_pred eEeecccccccccccccCCCCCCccccccceeeccCccccCCccccCCCCCCccCChhHHHHHHHHHhCCCCCceeEEEE
Q 012182 150 LLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIEL 229 (469)
Q Consensus 150 v~~Ip~LaiHL~~~~~~~~~~~n~~~~l~piig~~~~~~~~~~~~~~~~~~~~~~h~~~ll~~la~~~gV~~gDiv~~dl 229 (469)
.++||+++||+.++.+ .+.+++++|++++|..+.+ .++++ |++||++++|.
T Consensus 102 ~g~i~~~~~h~~~~~~---~~~~~~~~l~id~g~~s~~-------------------------e~~~~-i~~gd~v~~~~ 152 (340)
T 2fvg_A 102 KGVIGYRPIHLQRDEE---NTPPRFENLRIDFGFSSAD-------------------------EAKKY-VSIGDYVSFVS 152 (340)
T ss_dssp EEEEEECC--------------CCSTTEEEECSCSSHH-------------------------HHHTT-CCTTCEEEECC
T ss_pred EEEEcCCCccccchhh---ccCCCcccEEEEeCCCCHH-------------------------HHHhh-CCCCCEEEEcc
Confidence 3899999999987753 4788999999999975431 35667 99999999997
Q ss_pred EeeecCCccccCCCCceeeeccccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCcchHHHH
Q 012182 230 NICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAI 309 (469)
Q Consensus 230 ~l~d~~~~~~~Gl~~e~I~~~~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~gA~s~~~~dil 309 (469)
.+ ...| ++|.|+++||+.||++++++++.+. . .....+++++++||+|++|++.+..
T Consensus 153 ~~------~~~~---~~i~gra~D~k~g~a~~l~a~~~l~-~------~~~~i~~~~~~~EE~G~~G~~~~~~------- 209 (340)
T 2fvg_A 153 DY------IEKN---GRAVGKAFDDRAGCSVLIDVLESGV-S------PAYDTYFVFTVQEETGLRGSAVVVE------- 209 (340)
T ss_dssp CC------EEET---TEEEESCHHHHHHHHHHHHHHHTCC-C------CSEEEEEEEECCCC-----CHHHHH-------
T ss_pred Cc------eeec---CEEeeccCccHHHHHHHHHHHHHhh-c------cCCcEEEEEEcccccchhhhHHHhh-------
Confidence 43 3333 6899999999999999999999875 2 3456789999999999998875532
Q ss_pred HHHHhcccccCCchhhhhhhccCceEEEEecCCCC-CCCCCccccCCCCCcCCCCceEEEcCCCCcccCHHHHHHHHHHH
Q 012182 310 RRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGV-HPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIA 388 (469)
Q Consensus 310 ~ri~~~~~~~~~~~~~~~~~~~~s~~IS~DvahA~-~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia 388 (469)
.+.++++|+.|+++.. +|..+. | .+.+.+|+|++|+..+.. +..|+.+.+.++++|
T Consensus 210 -------------------~~~~~~~i~~d~~~~~~~~G~~~-h--~~~~~~G~g~~i~~~~~~-~~~~~~l~~~l~~~a 266 (340)
T 2fvg_A 210 -------------------QLKPTCAIVVETTTAGDNPELEE-R--KWATHLGDGPAITFYHRG-YVIPKEIFQTIVDTA 266 (340)
T ss_dssp -------------------HHCCSEEEEEEEEEECSCSTTCC-S--SSSCCTTSCCEECSCCSS-SCCCHHHHHHHHHHH
T ss_pred -------------------ccCCCEEEEEecccCCCCCCCcc-c--cCCcccCCCcEEEEeCCC-CCCCHHHHHHHHHHH
Confidence 1355789999999886 455542 3 347899999999987664 678999999999999
Q ss_pred HHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEechhhccccchhhhcCHHHHHHHHHHHHHHHhhccc
Q 012182 389 KLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSS 460 (469)
Q Consensus 389 ~~~~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tidIGiP~r~MHS~~E~~~~~Dv~~~~~ll~af~~~~~~ 460 (469)
++.|+|+|..+. .++|++.+++..++.|||++.+|+|.++|||+.|.++.+|++.+++++.+|+..+..
T Consensus 267 ~~~gi~~~~~~~---~~ggtDa~~~~~~~~GiP~v~~g~~~~~~Hs~~E~v~~~dl~~~~~ll~~~~~~l~~ 335 (340)
T 2fvg_A 267 KNNDIPFQMKRR---TAGGTDAGRYARTAYGVPAGVISTPARYIHSPNSIIDLNDYENTKKLIKVLVEEGKI 335 (340)
T ss_dssp HHTTCCCEECCC---C-------------CCSCEEEEEEEEEESSTTCEEEEHHHHHHHHHHHHHHHHHCHH
T ss_pred HHcCCCeEEEec---CCCCccHHHHHhhCCCCcEEEecccccccCChhhcccHHHHHHHHHHHHHHHHhccc
Confidence 999999998532 134444667777778999999999999999999999999999999999999998754
No 16
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.96 E-value=1.7e-28 Score=247.68 Aligned_cols=225 Identities=17% Similarity=0.075 Sum_probs=179.6
Q ss_pred eEeecccccccccccccCCCCCCccccccceeeccCccccCCccccCCCCCCccCChhHHHHHHHHHhCCCCCceeEEEE
Q 012182 150 LLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIEL 229 (469)
Q Consensus 150 v~~Ip~LaiHL~~~~~~~~~~~n~~~~l~piig~~~~~~~~~~~~~~~~~~~~~~h~~~ll~~la~~~gV~~gDiv~~dl 229 (469)
.++||.++||+.++.+ .+.+++++|.+++|..+.+ .++++ |++||++++|.
T Consensus 107 ~g~i~~~~~h~~~~~~---~~~~~~~~~~id~g~~~~~-------------------------~~~~~-i~~Gd~~~~~~ 157 (332)
T 2wyr_A 107 DGVIGATPPHLSLERD---KSVIPWYDLVIDIGAESKE-------------------------EALEL-VKPLDFAVFKK 157 (332)
T ss_dssp EEEECCCCTTC--------CCCCCGGGCCBBCSCSSHH-------------------------HHHHH-CCTTCEEEECC
T ss_pred EEEEcCCCcccChhhh---ccCCChHHEEEEeCCCCHH-------------------------HHHhh-CCCCCEEEEcc
Confidence 3789999999986543 4788899999999975531 46677 99999999985
Q ss_pred EeeecCCccccCCCCceeeeccccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCcchHHHH
Q 012182 230 NICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAI 309 (469)
Q Consensus 230 ~l~d~~~~~~~Gl~~e~I~~~~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~gA~s~~~~dil 309 (469)
.+ ..+ .+++|.|+++||+.||++++++++.+... ......+++|+++||+|++|++.+...
T Consensus 158 ~~------~~~--~~~~i~gra~D~k~g~a~~l~a~~~l~~~-----~~~~~i~~~~~~~EE~G~~G~~~~~~~------ 218 (332)
T 2wyr_A 158 HF------SVL--NGKYVSTRGLDDRFGVVALIEAIKDLVDH-----ELEGKVIFAFTVQEEVGLKGAKFLANH------ 218 (332)
T ss_dssp CC------EEE--TTTEEECTTHHHHHHHHHHHHHHHTTTTS-----CCSSEEEEEEESCGGGTSHHHHHHTTT------
T ss_pred cc------EEe--cCCeEEcccCCcHHHHHHHHHHHHHHhhc-----CCCceEEEEEECccccCcchHHHHhcc------
Confidence 32 232 57899999999999999999999987642 123567899999999999998766432
Q ss_pred HHHHhcccccCCchhhhhhhccCceEEEEecCCCCCCCCCccccCCCCCcCCCCceEEEcCCCCcccCHHHHHHHHHHHH
Q 012182 310 RRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAK 389 (469)
Q Consensus 310 ~ri~~~~~~~~~~~~~~~~~~~~s~~IS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~ 389 (469)
+.++++|++|++++.+ +|. +...||+|+.|++.+.. +..++.+.+.++++|+
T Consensus 219 --------------------~~~~~~i~~d~~~~~~--~p~-----~~~~lg~G~~i~~~d~~-~~~~~~l~~~l~~~~~ 270 (332)
T 2wyr_A 219 --------------------YYPQYAFAIDSFACCS--PLT-----GDVKLGKGPVIRAVDNS-AIYSRDLARKVWSIAE 270 (332)
T ss_dssp --------------------CCCSEEEEECCEECCS--GGG-----TTCCTTSCCEEEEECSS-CBCCHHHHHHHHHHHH
T ss_pred --------------------cCCCEEEEEecccccC--CCC-----CceeeCCCCEEEEcCCC-CCCCHHHHHHHHHHHH
Confidence 3457899999998763 122 35789999999987764 7789999999999999
Q ss_pred HCCCCEeEEEeecCCCCCCC-hHHHHhcCCCCcEEEechhhccccchhhhcCHHHHHHHHHHHHHHHhhc
Q 012182 390 LHNLPTQEFVVRNDMGCGST-IGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESF 458 (469)
Q Consensus 390 ~~~Ip~Q~~v~r~D~~gGgT-ig~i~~s~~Gi~tidIGiP~r~MHS~~E~~~~~Dv~~~~~ll~af~~~~ 458 (469)
+.|+|+|.... +|+| .+++.. |||++++|+|.++|||+.|.++.+|++.+++++.+|+..+
T Consensus 271 ~~gi~~~~~~~-----~ggtDa~~~~~---GiPtv~lg~~~~~~Hs~~E~v~~~dl~~~~~ll~~~~~~l 332 (332)
T 2wyr_A 271 KNGIEIQIGVT-----GGGTDASAFQD---RSKTLALSVPIKYLHSEVETLHLNDLEKLVKLIEALAFEL 332 (332)
T ss_dssp HTTCCCEEEEC-----SSCCGGGGGTT---TSEEEEEECEEBSCSSTTCEEEHHHHHHHHHHHHHHHHHC
T ss_pred HcCCCeEEecC-----CCCchHHHHHc---CCCEEEEcCCcCCCCChhhcccHHHHHHHHHHHHHHHHhC
Confidence 99999998763 3555 455443 9999999999999999999999999999999999998754
No 17
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=99.96 E-value=1.1e-30 Score=263.79 Aligned_cols=186 Identities=17% Similarity=0.094 Sum_probs=158.2
Q ss_pred HHHhCCCCCceeEEEEEeeecCCccccCCCCceeeeccccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccC
Q 012182 214 SQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVG 293 (469)
Q Consensus 214 a~~~gV~~gDiv~~dl~l~d~~~~~~~Gl~~e~I~~~~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVG 293 (469)
++++ |++||+++++.. ++.. + +++.|+++|||.||+++++++..+. . .+++|++|||||
T Consensus 136 a~~l-v~~Gd~v~~~~~------~~~~--~-g~i~~~~~D~k~G~aa~l~al~~l~----------~-i~~~~t~~EEvG 194 (321)
T 3cpx_A 136 TDRL-IDRGTEVTFKPD------FREE--G-DFILTPYLDDRLGVWTALELAKTLE----------H-GIIAFTCWEEHG 194 (321)
T ss_dssp CSSC-CCTTCEEEECCC------CEEE--T-TEEECTTHHHHHHHHHHHHHTTTCC----------S-EEEEEESSTTTT
T ss_pred HHhc-CCCCCEEEeccC------cEEE--c-CEEEEcCCcCHHHHHHHHHHHHHhc----------C-cEEEEECCccCc
Confidence 3456 999999999963 3333 3 7899999999999999999987541 1 679999999999
Q ss_pred cccccccCCcchHHHHHHHHhcccccCCchhhhhhhccCceEEEEecCCCCCCCCCccccCCCCCcCCCCceEEEcCCCC
Q 012182 294 SDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQR 373 (469)
Q Consensus 294 srga~gA~s~~~~dil~ri~~~~~~~~~~~~~~~~~~~~s~~IS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~ 373 (469)
++|+++|++.+ .+.+.++++|++|++++.| .+.+|+||+|++++ +
T Consensus 195 ~~Ga~~a~~~~----------------------~~~~~~~~~i~~D~~~~~~-----------~~~~~~G~~i~~~~--~ 239 (321)
T 3cpx_A 195 GGSVAYLARWI----------------------YETFHVKQSLICDITWVTE-----------GVEAGKGVAISMRD--R 239 (321)
T ss_dssp CCSHHHHHHHH----------------------HHHHCCCEEEECCCEECCS-----------SSCTTSCEEEEEES--S
T ss_pred hhcchhhhhcc----------------------ccccCCCEEEEEeCccccC-----------CcccCCCcEEEECC--C
Confidence 99999876421 1235678999999999876 24799999999987 7
Q ss_pred cccCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEechhhccccchhhhcCHHHHHHHHHHHHH
Q 012182 374 YATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKA 453 (469)
Q Consensus 374 y~t~~~~~~~l~~ia~~~~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tidIGiP~r~MHS~~E~~~~~Dv~~~~~ll~a 453 (469)
+.+|+.+.+.++++|+++|||+|.++. .+||+|+++++.++.||||+++|+|++||||++|+++++|++.+++|+.+
T Consensus 240 ~~~~~~l~~~~~~~a~~~gi~~q~~~~---~~GGsD~~~~~~s~~Gipt~~lG~~~~~~Hs~~E~~~~~dl~~~~~ll~~ 316 (321)
T 3cpx_A 240 MIPRKKYVNRIIELARQTDIPFQLEVE---GAGASDGRELQLSPYPWDWCFIGAPEKDAHTPNECVHKKDIESMVGLYKY 316 (321)
T ss_dssp SCCCHHHHHHHHHHHTTSSCCEEEEEC---SSCCCHHHHHHHSSSCCBCCBEECEEBSTTSTTCEEEHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeC---CCCCccHHHHHHhCCCCCEEEEchhhcccchhhhheeHHHHHHHHHHHHH
Confidence 999999999999999999999999764 24555578888889999999999999999999999999999999999999
Q ss_pred HHhhc
Q 012182 454 FYESF 458 (469)
Q Consensus 454 f~~~~ 458 (469)
|++.+
T Consensus 317 ~~~~l 321 (321)
T 3cpx_A 317 LMEKL 321 (321)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 99764
No 18
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=99.68 E-value=5.4e-15 Score=143.80 Aligned_cols=200 Identities=21% Similarity=0.169 Sum_probs=155.6
Q ss_pred HHHHhCCCCCceeEEEEEeeecCCccccCCCCceeeeccccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEecccc
Q 012182 213 LSQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEV 292 (469)
Q Consensus 213 la~~~gV~~gDiv~~dl~l~d~~~~~~~Gl~~e~I~~~~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEV 292 (469)
.....++..+..+.......-. ......++++|++.++..+++++.++.. ........++.++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~ 217 (354)
T 2wzn_A 153 EAEEMGFRVGTVGEFAPNFTRL--------NEHRFATPYLDDRICLYAMIEAARQLGD-------HEADIYIVGSVQEEV 217 (354)
T ss_dssp HHHHTTCCTTCEEEECCCCEEC--------SSSEEECTTHHHHHHHHHHHHHHHHCCC-------CSSEEEEEEESCGGG
T ss_pred hhhccccccceeeeeeeeeEee--------cccccccccccccchhhhHHHHHHHHHh-------ccccccccccceeee
Confidence 4557788888888876654432 3456788999999999999999998864 233467789999999
Q ss_pred CcccccccCCcchHHHHHHHHhcccccCCchhhhhhhccCceEEEEecCCCCCCCCCccccCCCCCcCCCCceEEEcCCC
Q 012182 293 GSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQ 372 (469)
Q Consensus 293 Gsrga~gA~s~~~~dil~ri~~~~~~~~~~~~~~~~~~~~s~~IS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~ 372 (469)
|.++...+.+. ......++.+..+..++.... .....++.|......
T Consensus 218 g~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~--- 264 (354)
T 2wzn_A 218 GLRGARVASYA--------------------------INPEVGIAMDVTFAKQPHDKG----KIVPELGKGPVMDVG--- 264 (354)
T ss_dssp TSHHHHHHHHH--------------------------HCCSEEEEEEEEECCCTTSTT----CCCCCTTSCCEEEES---
T ss_pred eeecccccccc--------------------------cccccceeeeeeeccccchhh----hhheeeccccccccc---
Confidence 98877765432 233456777777777654432 235678888877654
Q ss_pred CcccCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChH-HHHhcCCCCcEEEechhhccccchhhhcCHHHHHHHHHHH
Q 012182 373 RYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIG-PILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHF 451 (469)
Q Consensus 373 ~y~t~~~~~~~l~~ia~~~~Ip~Q~~v~r~D~~gGgTig-~i~~s~~Gi~tidIGiP~r~MHS~~E~~~~~Dv~~~~~ll 451 (469)
...++.........+...++++|..+.. .+|||.+ .++.++.||||+.+|+|.+||||+.|.++++|++.+++++
T Consensus 265 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ggTDa~~~~~~~~Giptv~~G~g~~~~Ht~~E~v~i~dl~~~~~ll 340 (354)
T 2wzn_A 265 -PNINPKLRAFADEVAKKYEIPLQVEPSP---RPTGTDANVMQINKEGVATAVLSIPIRYMHSQVELADARDVDNTIKLA 340 (354)
T ss_dssp -TTSCHHHHHHHHHHHHHTTCCCEEEECC---SCCSSHHHHHHTSTTCCEEEEEEEEEBSTTSTTCEEEHHHHHHHHHHH
T ss_pred -cccCcchhhhhHHHHHHhcCCCceEEEe---cccccHHHHHHHhcCCCCEEEECcccCCCCcccEEEEHHHHHHHHHHH
Confidence 3457888888999999999999987753 3577765 5667889999999999999999999999999999999999
Q ss_pred HHHHhhccccccc
Q 012182 452 KAFYESFSSIDKK 464 (469)
Q Consensus 452 ~af~~~~~~~~~~ 464 (469)
.+|+++|.++||.
T Consensus 341 ~~~i~~L~~~d~~ 353 (354)
T 2wzn_A 341 KALLEELKPMDFT 353 (354)
T ss_dssp HHHHHHCCCCCCC
T ss_pred HHHHHhCccccCC
Confidence 9999999998763
No 19
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.59 E-value=2.7e-15 Score=147.15 Aligned_cols=172 Identities=11% Similarity=0.130 Sum_probs=121.2
Q ss_pred ceeeec-cccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcc-cccccCCcchHHHHHHHHhcccccCCc
Q 012182 245 EFIFSG-RLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSD-SYQGAGAPTMFQAIRRIVGSLAHEHVS 322 (469)
Q Consensus 245 e~I~~~-~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsr-ga~gA~s~~~~dil~ri~~~~~~~~~~ 322 (469)
+++.|+ ..||+.++++++++++.+.+.. ......++++|+.+||+|++ |+.... +.+.
T Consensus 94 g~~~grG~~D~k~g~a~~l~a~~~l~~~~---~~~~~~i~~~~~~~EE~g~~~Ga~~~~--------~~~~--------- 153 (269)
T 4h2k_A 94 GMLYGRGAADMKGSLAAMIVAAEEYVKAN---PNHKGTIALLITSDEEATAKDGTIHVV--------ETLM--------- 153 (269)
T ss_dssp TEEESTTTTTTHHHHHHHHHHHHHHHHHC---TTCSSEEEEEEESCSSSCCTTSHHHHH--------HHHH---------
T ss_pred CEEEeCCcccChHHHHHHHHHHHHHHHhC---CCCCccEEEEEEeccccCcccCHHHHH--------HHHH---------
Confidence 345554 5899999999999887764210 01345678999999999984 665321 1111
Q ss_pred hhhhhhhccCceEEEEecCCCCCCCCCccccCCCCCcCCCCceEEEcCCCCcccCHHHHHHHHHHHHH-CCCCEeEEEee
Q 012182 323 ETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKL-HNLPTQEFVVR 401 (469)
Q Consensus 323 ~~~~~~~~~~s~~IS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~-~~Ip~Q~~v~r 401 (469)
.+...++++|..|.+....+. + .-...+.|.|. +..+..+.+.+++.|++ .+|++|...
T Consensus 154 ----~~~~~~d~~i~~Ept~~~~~~--~---~i~~g~~G~G~---------~~~~~~l~~~l~~aa~~~~gi~~~~~~-- 213 (269)
T 4h2k_A 154 ----ARDEKITYCMVGEPSSAKNLG--D---VVKNGRRGGGF---------LTKPGKLLDSITSAIEETIGITPKAET-- 213 (269)
T ss_dssp ----HTTCCCCEEEECCCCBSSSTT--S---EEECSCTTCC---------------HHHHHHHHHHHHHHSCCCEEEC--
T ss_pred ----hcCCCCCEEEEECCCCCCcCC--c---eeEEecccccc---------cCCCcHHHHHHHHHHHHHhCCCCEEec--
Confidence 112466899999988764321 1 01134567772 12245688999999998 899999754
Q ss_pred cCCCCCCChHHHHhcCCCCcEEEechhhccccchhhhcCHHHHHHHHHHHHHHHhhccc
Q 012182 402 NDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSS 460 (469)
Q Consensus 402 ~D~~gGgTig~i~~s~~Gi~tidIGiP~r~MHS~~E~~~~~Dv~~~~~ll~af~~~~~~ 460 (469)
.+|||.+.+++ +.|+|++.+|+|.+||||+.|.++.+|++.+++++.++++.+-+
T Consensus 214 ---~gggtDa~~~~-~~g~p~~~~~~~~~~~Hs~~E~v~~~d~~~~~~ll~~~l~~l~~ 268 (269)
T 4h2k_A 214 ---GGGTSDGRFIA-LMGAEVVEFGPLNSTIHKVNECVSVEDLGKCGEIYHKMLVNLLD 268 (269)
T ss_dssp ---C--CHHHHHHH-TTTCEEEECCSBCTTTTSTTCEEEHHHHHHHHHHHHHHHHHHC-
T ss_pred ---CCCCchHHHHH-hhCCCEEEEEeCCCCCcCCcccccHHHHHHHHHHHHHHHHHHhh
Confidence 35777776666 68999999999999999999999999999999999999987643
No 20
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.49 E-value=3.5e-14 Score=139.07 Aligned_cols=170 Identities=11% Similarity=0.090 Sum_probs=119.0
Q ss_pred ceeeec-cccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCc-ccccccCCcchHHHHHHHHhcccccCCc
Q 012182 245 EFIFSG-RLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGS-DSYQGAGAPTMFQAIRRIVGSLAHEHVS 322 (469)
Q Consensus 245 e~I~~~-~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGs-rga~gA~s~~~~dil~ri~~~~~~~~~~ 322 (469)
+++.|+ +.||+.||++++++++.+.+.. ......++++|+.+||+|+ +|+.... +.+.
T Consensus 94 g~~~g~G~~D~k~g~a~~l~a~~~l~~~~---~~~~~~v~~~~~~~EE~g~~~Ga~~~~--------~~~~--------- 153 (268)
T 3t68_A 94 GFLHGRGAADMKGSLACMIVAVERFIAEH---PDHQGSIGFLITSDEEGPFINGTVRVV--------ETLM--------- 153 (268)
T ss_dssp TEEESTTTTTTHHHHHHHHHHHHHHHHHC---TTCSSEEEEEEESCTTSSSCCHHHHHH--------HHHH---------
T ss_pred CEEEecCcccchHHHHHHHHHHHHHHHhC---CCCCCcEEEEEEeCCccCcccCHHHHH--------HHHH---------
Confidence 456654 7899999999999887764210 0134567899999999998 4665322 1111
Q ss_pred hhhhhhhccCceEEEEecCCCCCCCCCccccCCCCCcCCCCceEEEcCCCCcccCHHHHHHHHHHHHH-CCCCEeEEEee
Q 012182 323 ETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKL-HNLPTQEFVVR 401 (469)
Q Consensus 323 ~~~~~~~~~~s~~IS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~-~~Ip~Q~~v~r 401 (469)
.+...++++|..|.+....+. ... .....|. |.+. .+..+.+.+++.+++ .||++|...
T Consensus 154 ----~~~~~~d~~i~~ept~~~~~~-~~i----~~g~~G~-p~~~--------~~~~l~~~l~~a~~~~~gi~~~~~~-- 213 (268)
T 3t68_A 154 ----ARNELIDMCIVGEPSSTLAVG-DVV----KNGRRGG-GFLT--------DTGELLAAVVAAVEEVNHQAPALLT-- 213 (268)
T ss_dssp ----HTTCCCCEEEECSCCBSSSTT-SEE----EECCGGG-GTSC--------CCCHHHHHHHHHHHHHHSSCCEEES--
T ss_pred ----hcCCCCCEEEEeCCCCCccCC-cee----EEecCCC-cccC--------CchHHHHHHHHHHHHHhCCCcEEec--
Confidence 112466899999988664221 000 0112222 3321 123588999999998 699999743
Q ss_pred cCCCCCCChHHHHhcCCCCcEEEechhhccccchhhhcCHHHHHHHHHHHHHHHhhc
Q 012182 402 NDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESF 458 (469)
Q Consensus 402 ~D~~gGgTig~i~~s~~Gi~tidIGiP~r~MHS~~E~~~~~Dv~~~~~ll~af~~~~ 458 (469)
.+|||.+.+++ +.|+|++.+|+|.+||||+.|.++.+|++.+++++.++++++
T Consensus 214 ---sgggtD~~~~~-~~g~p~~~~~~~~~~~Hs~~E~v~~~d~~~~~~vl~~~l~~l 266 (268)
T 3t68_A 214 ---TGGTSDGRFIA-QMGAQVVELGPVNATIHKVNECVRIADLEKLTDMYQKTLNHL 266 (268)
T ss_dssp ---SCCCHHHHHHH-HHTCEEEECCSBCTTTTSTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred ---CccccHHHHHH-hcCCCEEEEeeCCCCCCCccccccHHHHHHHHHHHHHHHHHH
Confidence 35777665555 479999999999999999999999999999999999999765
No 21
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.20 E-value=2.1e-11 Score=121.33 Aligned_cols=167 Identities=10% Similarity=-0.066 Sum_probs=117.4
Q ss_pred eeeeccccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCcchHHHHHHHHhcccccCCchhh
Q 012182 246 FIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETS 325 (469)
Q Consensus 246 ~I~~~~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~gA~s~~~~dil~ri~~~~~~~~~~~~~ 325 (469)
.+..++.||+.||++++++++.+.+... .....++++++++||+|+.|++.....+.+ .
T Consensus 110 ~~~~Ga~D~~~g~a~~l~~~~~l~~~~~---~~~~~i~~~~~~~EE~g~~Gs~~~~~~~~~--------~---------- 168 (299)
T 1rtq_A 110 SVAPGADDDASGIAAVTEVIRVLSENNF---QPKRSIAFMAYAAEEVGLRGSQDLANQYKS--------E---------- 168 (299)
T ss_dssp CCCCCTTTTHHHHHHHHHHHHHHHHTTC---CCSEEEEEEEESCGGGTSHHHHHHHHHHHH--------T----------
T ss_pred cccCCCcccHHHHHHHHHHHHHHHHcCC---CCCceEEEEEECCccCCchhHHHHHHhhhh--------c----------
Confidence 4677889999999999999988753210 134567899999999999887743222111 0
Q ss_pred hhhhccCceEEEEecCCCCCCCCCccccCCCCCcCCCCceEEEcCCCCcccCHHHHHHHHHHHHHC--CCCEeEEEeecC
Q 012182 326 FECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLH--NLPTQEFVVRND 403 (469)
Q Consensus 326 ~~~~~~~s~~IS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~--~Ip~Q~~v~r~D 403 (469)
...-..+|.+|+..+. |.|..+.+... .+++.+..++++++++. +|++|....
T Consensus 169 ---~~~~~~~i~~D~~g~~----------------g~~~~i~~~~~---~~~~~l~~~l~~~a~~~~~~i~~~~~~~--- 223 (299)
T 1rtq_A 169 ---GKNVVSALQLDMTNYK----------------GSAQDVVFITD---YTDSNFTQYLTQLMDEYLPSLTYGFDTC--- 223 (299)
T ss_dssp ---TCEEEEEEECSCCSCC----------------CSSSSEEEECT---TSCHHHHHHHHHHHHHHCTTCCEEEECC---
T ss_pred ---cccEEEEEEecCCCCC----------------CCCcceEEEeC---CCCchHHHHHHHHHHHhCccCCcccCCC---
Confidence 0122467889986541 11222333221 24778889999999998 899996532
Q ss_pred CCCCCChHHHHhcCCCCcEEEech-----hhccccchhhhcCHHHH-----HHHHHHHHHHHhhccc
Q 012182 404 MGCGSTIGPILASGVGIRTVDCGI-----AQLSMHSVREICGTEDI-----DIAYRHFKAFYESFSS 460 (469)
Q Consensus 404 ~~gGgTig~i~~s~~Gi~tidIGi-----P~r~MHS~~E~~~~~Dv-----~~~~~ll~af~~~~~~ 460 (469)
..+||+..++. +.|||++.+.. |.+|+||+.++++..|. ..+.+++.+|+..+.+
T Consensus 224 ~~~~sD~~~f~--~~GiP~~~~~~~~~~~~~~~yHt~~Dt~~~~d~~~~~~~~~~~l~~~~~~~La~ 288 (299)
T 1rtq_A 224 GYACSDHASWH--NAGYPAAMPFESKFNDYNPRIHTTQDTLANSDPTGSHAKKFTQLGLAYAIEMGS 288 (299)
T ss_dssp SSCCSTHHHHH--HTTCCEECEESSCGGGSCTTTTSTTCCGGGSCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcHHHHH--HCCCCEEEecccccccCCCCCCCccccccccCccHHHHHHHHHHHHHHHHHHhC
Confidence 12345567875 47999998866 77999999999999997 8889999999987754
No 22
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.14 E-value=9.6e-11 Score=115.76 Aligned_cols=159 Identities=18% Similarity=0.056 Sum_probs=113.8
Q ss_pred cccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCcchHHHHHHHHhcccccCCchhhhhhhc
Q 012182 251 RLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTI 330 (469)
Q Consensus 251 ~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~gA~s~~~~dil~ri~~~~~~~~~~~~~~~~~~ 330 (469)
+.||+.||+++|++++.+.+... .....++++|+++||+|+.|++.....+.++.+ -
T Consensus 95 a~D~~~g~a~~l~~~~~l~~~~~---~~~~~i~~~~~~~EE~g~~Gs~~~~~~~~~~~~--------------------~ 151 (284)
T 1tkj_A 95 INDNGSGSAAVLETALAVSRAGY---QPDKHLRFAWWGAEELGLIGSKFYVNNLPSADR--------------------S 151 (284)
T ss_dssp TTTTHHHHHHHHHHHHHHHHTTC---CCSEEEEEEEESCGGGTSHHHHHHHHHSCHHHH--------------------T
T ss_pred CccChHHHHHHHHHHHHHHhcCC---CCCceEEEEEECCcccCCcCHHHHHhhCccchh--------------------h
Confidence 68999999999999988753210 134567899999999999887744333222110 0
Q ss_pred cCceEEEEecCCCCCCCCCccccCCCCCcCCCCceEEEcCCCCcccCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCCh
Q 012182 331 RQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTI 410 (469)
Q Consensus 331 ~~s~~IS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~v~r~D~~gGgTi 410 (469)
.-..+|.+|+....++ |..+ +..++.+...+++++++.+|++|.... ..+++..
T Consensus 152 ~~~~~i~~D~~g~~~~----------------~~~~-------~~~~~~l~~~~~~~~~~~gi~~~~~~~---~~~~sD~ 205 (284)
T 1tkj_A 152 KLAGYLNFDMIGSPNP----------------GYFV-------YDDDPVIEKTFKNYFAGLNVPTEIETE---GDGRSDH 205 (284)
T ss_dssp TEEEEEEECCCCCSSC----------------CCEE-------CCSSHHHHHHHHHHHHHHTCCCEECCS---STTCSTH
T ss_pred cEEEEEEecCCCCCCC----------------CeEE-------ecCCHHHHHHHHHHHHHcCCCcccCCC---CCCCCch
Confidence 1136788997644221 2221 113567788899999999999996432 1234556
Q ss_pred HHHHhcCCCCcEEEechh---------------------hccccchhhh---cCHHHHHHHHHHHHHHHhhccc
Q 012182 411 GPILASGVGIRTVDCGIA---------------------QLSMHSVREI---CGTEDIDIAYRHFKAFYESFSS 460 (469)
Q Consensus 411 g~i~~s~~Gi~tidIGiP---------------------~r~MHS~~E~---~~~~Dv~~~~~ll~af~~~~~~ 460 (469)
.++. +.|||++.++.+ .+|+||+..+ ++..|+..+.+++.+++..+..
T Consensus 206 ~~f~--~~Gip~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~yHt~~D~~~~id~~~l~~~~~~~~~~~~~la~ 277 (284)
T 1tkj_A 206 APFK--NVGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYHSSCDSLSNINDTALDRNSDAAAHAIWTLSS 277 (284)
T ss_dssp HHHH--HTTCCEEEEECCCSSBCCHHHHHHHCSCTTSBSCTTTTSTTCSTTSCCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHH--HCCCCEEEeecCcccccccchhhccccccccCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHHHHhc
Confidence 7776 489999999988 6899999998 9999999999999999987654
No 23
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=98.95 E-value=1.2e-09 Score=112.65 Aligned_cols=80 Identities=13% Similarity=0.036 Sum_probs=68.6
Q ss_pred cCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEechhhccccchhhhcCHHHHHHHHHHHHHHH
Q 012182 376 TSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFY 455 (469)
Q Consensus 376 t~~~~~~~l~~ia~~~~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tidIGiP~r~MHS~~E~~~~~Dv~~~~~ll~af~ 455 (469)
.|..+.+.+++++++.|+++|... .+|||.+.+... .|+|++.+|++..++||+.|.++.+|+..+++++..++
T Consensus 328 ~~~~l~~~~~~~~~~~g~~~~~~~-----~~ggtD~~~~~~-~gip~v~~G~~~~~~H~~~E~i~~~~l~~~~~~~~~~~ 401 (417)
T 1fno_A 328 EHPHILDIAQQAMRDCHITPEMKP-----IRGGTDGAQLSF-MGLPCPNLFTGGYNYHGKHEFVTLEGMEKAVQVIVRIA 401 (417)
T ss_dssp TSTHHHHHHHHHHHHTTCCCBCCC-----BSSCCHHHHHTT-TTCCCCEECCSEESTTSTTCEEEHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHcCCCceecc-----ceeccchHhHHh-cCCCEEEEcCCCCCCCCcccccCHHHHHHHHHHHHHHH
Confidence 577888999999999999988643 367887766654 69999999999999999999999999999999999999
Q ss_pred hhcccc
Q 012182 456 ESFSSI 461 (469)
Q Consensus 456 ~~~~~~ 461 (469)
..+...
T Consensus 402 ~~~~~~ 407 (417)
T 1fno_A 402 ELTAKR 407 (417)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 887653
No 24
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=98.74 E-value=3.8e-08 Score=99.79 Aligned_cols=77 Identities=17% Similarity=0.148 Sum_probs=67.8
Q ss_pred cCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEechhhccccchhhhcCHHHHHHHHHHHHHHH
Q 012182 376 TSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFY 455 (469)
Q Consensus 376 t~~~~~~~l~~ia~~~~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tidIGiP~r~MHS~~E~~~~~Dv~~~~~ll~af~ 455 (469)
.|..+.+.+++++++.|+++|... .+|||.+.+.+. .|+|++.+|++..++|++.|.++.+|+...++++..++
T Consensus 295 ~~~~l~~~~~~~~~~~g~~~~~~~-----~~g~~D~~~~~~-~gip~~~~g~~~~~~H~~~E~i~~~~l~~~~~~~~~~l 368 (373)
T 3gb0_A 295 DGDHVVEVAKRAAEKIGRTPSLHQ-----SGGGSDANVIAG-HGIPTVNLAVGYEEIHTTNEKIPVEELAKTAELVVAII 368 (373)
T ss_dssp TTCHHHHHHHHHHHHTTCCCEEEE-----CSSCCHHHHHHH-TTCCEEEEECCCBSTTSTTCEEEHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCCceEec-----ccCcchHHHHHh-CCCCEEEecCCCCcCcCCceEEEHHHHHHHHHHHHHHH
Confidence 377889999999999999988654 367887666654 69999999999999999999999999999999999999
Q ss_pred hhc
Q 012182 456 ESF 458 (469)
Q Consensus 456 ~~~ 458 (469)
.++
T Consensus 369 ~~l 371 (373)
T 3gb0_A 369 EEV 371 (373)
T ss_dssp HHH
T ss_pred HHh
Confidence 887
No 25
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=98.73 E-value=8.8e-08 Score=99.64 Aligned_cols=160 Identities=13% Similarity=-0.031 Sum_probs=109.7
Q ss_pred ccccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCcchHHHHHHHHhcccccCCchhhhhhh
Q 012182 250 GRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECT 329 (469)
Q Consensus 250 ~~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~gA~s~~~~dil~ri~~~~~~~~~~~~~~~~~ 329 (469)
++.||..||.++|++++.+.+. .....+++++|+.||.|+.|++.-...+.++.++++
T Consensus 237 Ga~D~~~G~a~~le~~~~l~~~-----~~~~~i~~~~~~~EE~g~~Gs~~~~~~~~~~~~~~~----------------- 294 (421)
T 2ek8_A 237 GANDDASGVAVTLELARVMSKL-----KTDTELRFITFGAEENGLIGSKKYAASLSEDEIKRT----------------- 294 (421)
T ss_dssp CTTTTHHHHHHHHHHHHHHTTS-----CCSSEEEEEEESSSTTTSHHHHHHHTTCCHHHHHHE-----------------
T ss_pred CCCCCcHhHHHHHHHHHHHhcc-----CCCceEEEEEECCccccchhHHHHHHhCccchhhcE-----------------
Confidence 7889999999999999988642 234578899999999999998866555444322221
Q ss_pred ccCceEEEEecCCCCCCCCCccccCCCCCcCCCCceEEEcCCCCcccCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCC
Q 012182 330 IRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGST 409 (469)
Q Consensus 330 ~~~s~~IS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~v~r~D~~gGgT 409 (469)
..+|.+|+... |+++... ...+.|. ++ .......+.+++.++| |.... .+||+
T Consensus 295 ---~~~in~D~~g~--~~~~~~~-----~~~~~g~-----------~~-~~~~~~~~~~~~~~~~-~~~~~----~~~SD 347 (421)
T 2ek8_A 295 ---IGMFQLDMVGS--KDAGDLI-----MYTIDGK-----------KN-RVTDLGAAASSRLSGV-LPYGQ----EGRSD 347 (421)
T ss_dssp ---EEEEEECSCCB--TTSCEEE-----EEETTSC-----------CC-HHHHHHHHHHHHHTSC-CCEEE----CCSST
T ss_pred ---EEEEEecccCC--CCCcceE-----EecCCCc-----------cc-cchhhHHHHHHhcCCC-CCCCC----CCCCc
Confidence 34689998765 3331100 0111121 11 1223445667778998 54221 34566
Q ss_pred hHHHHhcCCCCcEEEec-hhh-ccccchhhh---cCHHHHHHHHHHHHHHHhhccc
Q 012182 410 IGPILASGVGIRTVDCG-IAQ-LSMHSVREI---CGTEDIDIAYRHFKAFYESFSS 460 (469)
Q Consensus 410 ig~i~~s~~Gi~tidIG-iP~-r~MHS~~E~---~~~~Dv~~~~~ll~af~~~~~~ 460 (469)
..+|+ +.|||++.++ .|. +++||+..+ ++..++..+.+++..++..+.+
T Consensus 348 ~~~F~--~~GIP~~~~~~~~~~~~yHt~~Dt~~~i~~~~l~~~~~~~~~~~~~la~ 401 (421)
T 2ek8_A 348 HESFH--ALGIPAALFIHAPVEPWYHTPNDTLDKISKEKLDNVADIVGSAVYQAAR 401 (421)
T ss_dssp HHHHH--TTTCCEEEEEEESCCTTTTSTTCCGGGBCHHHHHHHHHHHHHHHHHHHS
T ss_pred cHHHH--HCCCCEEEEECCcCCCCCCCcccchhhCCHHHHHHHHHHHHHHHHHHhC
Confidence 67887 5899999886 675 789999998 8999999999999999877654
No 26
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=98.71 E-value=3.5e-08 Score=101.20 Aligned_cols=78 Identities=15% Similarity=0.252 Sum_probs=68.1
Q ss_pred CHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEechhhccccchhhhcCHHHHHHHHHHHHHHHh
Q 012182 377 SGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYE 456 (469)
Q Consensus 377 ~~~~~~~l~~ia~~~~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tidIGiP~r~MHS~~E~~~~~Dv~~~~~ll~af~~ 456 (469)
|..+.+.+++++++.|++++... .+|||.+.+... .|+|++.+|++..++|++.|.++.+|+..+++++..++.
T Consensus 316 d~~l~~~~~~~~~~~g~~~~~~~-----~~g~tD~~~~~~-~giP~~~~g~g~~~~H~~~E~v~~~~l~~~~~~~~~~~~ 389 (396)
T 3rza_A 316 NEAVVKIAQESARNLGLSANTII-----SGGGSDGSIINT-FGIPSVILGVGYEKIHTTNERMPIKSLNLLASQVLEIIK 389 (396)
T ss_dssp TSHHHHHHHHHHHHTTCCCCEEE-----CSSCCHHHHHGG-GTCCEEEEECCCBSTTSTTCEEEHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCCceecc-----cceeccHHHHhh-CCCcEEEECCCCCCCCCCcceeEHHHHHHHHHHHHHHHH
Confidence 77889999999999999987654 367887666654 699999999999999999999999999999999999998
Q ss_pred hccc
Q 012182 457 SFSS 460 (469)
Q Consensus 457 ~~~~ 460 (469)
.+.+
T Consensus 390 ~l~~ 393 (396)
T 3rza_A 390 IVAR 393 (396)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8754
No 27
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=98.24 E-value=7.7e-07 Score=90.95 Aligned_cols=78 Identities=13% Similarity=-0.035 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEE-echhhccccc-hhhhcCHHHHHHHHHHHHHHH
Q 012182 378 GVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVD-CGIAQLSMHS-VREICGTEDIDIAYRHFKAFY 455 (469)
Q Consensus 378 ~~~~~~l~~ia~~~~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tid-IGiP~r~MHS-~~E~~~~~Dv~~~~~ll~af~ 455 (469)
..+.+.+++++++.|++++.... .+|||.+.+... .|+|++. +|.+...+|+ +.|.++.+|+...++++..++
T Consensus 312 ~~l~~~~~~~~~~~g~~~~~~~~----~~g~tD~~~~~~-~giP~~~~~G~~~~~~H~~~~E~i~~~~l~~~~~~~~~~~ 386 (393)
T 1cg2_A 312 KKLVDKAVAYYKEAGGTLGVEER----TGGGTDAAYAAL-SGKPVIESLGLPGFGYHSDKAEYVDISAIPRRLYMAARLI 386 (393)
T ss_dssp HHHHHHHHHHHHHTTCCCEEESC----BSCCCTHHHHGG-GSCCEECCCSCEEECTTSSSCCEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCccccC----CCcccHHHHHHh-CCCCEEEeCCCCCCCccCCCcceEEehhHHHHHHHHHHHH
Confidence 66788899999999998765320 257777666654 6899994 8888788999 999999999999999999999
Q ss_pred hhccc
Q 012182 456 ESFSS 460 (469)
Q Consensus 456 ~~~~~ 460 (469)
..+..
T Consensus 387 ~~l~~ 391 (393)
T 1cg2_A 387 MDLGA 391 (393)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 87743
No 28
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=98.11 E-value=1.7e-05 Score=80.13 Aligned_cols=50 Identities=22% Similarity=0.280 Sum_probs=42.9
Q ss_pred CCCChHHHHhcCCCCcEEEechhh-ccccchhhhcCHHHHHHHHHHHHHHHh
Q 012182 406 CGSTIGPILASGVGIRTVDCGIAQ-LSMHSVREICGTEDIDIAYRHFKAFYE 456 (469)
Q Consensus 406 gGgTig~i~~s~~Gi~tidIGiP~-r~MHS~~E~~~~~Dv~~~~~ll~af~~ 456 (469)
+|+|.+.+.. +.|+|++.+|... ..+|++.|.++.+|+...++++..+++
T Consensus 318 ~ggtD~~~~~-~~giP~~~~Gpg~~~~~H~~~E~v~~~~l~~~~~~l~~~l~ 368 (369)
T 3tx8_A 318 FGWTDVSRFS-AMGIPALNFGAGDPSFAHKRDEQCPVEQITDVAAILKQYLS 368 (369)
T ss_dssp CSCCTHHHHH-TTTCCEEEECSSCSSSSSCTTCEEEHHHHHHHHHHHHHHHH
T ss_pred ccccchHHHh-hCCCCEEEECCCChhhCCCCCcEEEHHHHHHHHHHHHHHhh
Confidence 5677766665 4799999999875 579999999999999999999999876
No 29
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=97.99 E-value=6.8e-06 Score=86.17 Aligned_cols=163 Identities=13% Similarity=0.087 Sum_probs=100.3
Q ss_pred ccccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCcchHHHHHHHHhcccccCCchhhhhhh
Q 012182 250 GRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECT 329 (469)
Q Consensus 250 ~~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~gA~s~~~~dil~ri~~~~~~~~~~~~~~~~~ 329 (469)
.+.||..||.++|++++.+.+... .+...+.+++|+.||.|+.|++--...+.. .+
T Consensus 266 Ga~D~~sG~a~~le~a~~l~~~~~---~~~~~i~f~~~~~EE~gl~Gs~~~~~~~~~------------------~~--- 321 (444)
T 3iib_A 266 GAIDDGAGVAIVTAAAKHILDLPQ---KPERTIRVVLYAAEELGLLGGKTYAKEHEA------------------EL--- 321 (444)
T ss_dssp CTTTTHHHHHHHHHHHHHHHTSSS---CCSEEEEEEEESCGGGTSHHHHHHHHHTGG------------------GG---
T ss_pred CCccchHHHHHHHHHHHHHHhcCC---CCCCeEEEEEECCcccCCcCHHHHHHhhHh------------------hh---
Confidence 678999999999999888764211 245577899999999999886532221110 00
Q ss_pred ccCceEEEEecCCCCCCCCCccccCCCCCcCCCCceEEEcCCCCcccCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCC
Q 012182 330 IRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGST 409 (469)
Q Consensus 330 ~~~s~~IS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~v~r~D~~gGgT 409 (469)
-...++|-.|+ |.|+...+.... ......+...+.+.++..+++.+. ....+|++
T Consensus 322 ~~~~~~~n~D~--------------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~SD 376 (444)
T 3iib_A 322 EKHYIAAESDF--------------------GAGPIYQIDWRV-ADTAHSPVINAMKVAEPLGVAAGN----NKASGGPD 376 (444)
T ss_dssp GGEEEEEECCS--------------------TTCCEEEEEEEC-CHHHHHHHHHHGGGGGGGTCEECC----SCCCCCGG
T ss_pred hceeEEEECcC--------------------CCCcceEEEeec-ChhhHHHHHHHHHHHhhcCCcccc----CCCCCCCc
Confidence 01123455553 222222221111 111233344444445566766531 11233444
Q ss_pred hHHHHhcCCCCcEEEech-hhc---cccch---hhhcCHHHHHHHHHHHHHHHhhcccccc
Q 012182 410 IGPILASGVGIRTVDCGI-AQL---SMHSV---REICGTEDIDIAYRHFKAFYESFSSIDK 463 (469)
Q Consensus 410 ig~i~~s~~Gi~tidIGi-P~r---~MHS~---~E~~~~~Dv~~~~~ll~af~~~~~~~~~ 463 (469)
..++.. .|||++.+.. +.. +.||+ .+.++..++....+++..++..+.+.+.
T Consensus 377 ~~~f~~--~GiP~~~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~~~~~~v~~lA~~~~ 435 (444)
T 3iib_A 377 VSMLPA--LGVPVASLRQDGSDYFDYHHTPNDTLDKINPEALAQNVAVYAQFAWVMANSKV 435 (444)
T ss_dssp GTTSGG--GTCCEEEEEECCTTGGGTTTSTTCCGGGSCHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred cHHHHH--CCCCEEEeecCCCcCCCCCCCCccccccCCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 567653 7999999987 443 79999 8899999999999999999887766543
No 30
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=97.99 E-value=2.1e-05 Score=81.08 Aligned_cols=80 Identities=15% Similarity=0.153 Sum_probs=63.3
Q ss_pred CHHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEechhhccccchhhhcCHHHHHHHHHHHHHHH
Q 012182 377 SGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFY 455 (469)
Q Consensus 377 ~~~~~~~l~~ia~~-~~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tidIGiP~r~MHS~~E~~~~~Dv~~~~~ll~af~ 455 (469)
|......+++.+++ .|++.+... .+|||.+.+.....|+|++.+|.....+|++.|.++.+|+...++++..++
T Consensus 350 d~~~~~~~~~a~~~~~G~~~~~~~-----~~g~~D~~~~~~~~giP~v~~Gp~~~~~H~~~E~i~~~~l~~~~~~~~~~i 424 (433)
T 3pfo_A 350 GGVAEDVLTAAHKAAFNAPLDARL-----STAVNDTRYYSVDYGIPALCYGPYGQGPHAFDERIDLESLRKTTLSIALFV 424 (433)
T ss_dssp TCHHHHHHHHHHHHHHSSCCCEEE-----ESSCCTHHHHHHTTCCCEEECCCCEECTTSTTCEEEHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCceee-----eeeeccHHHHHhhCCCCEEEECCCCccCCCCCceEEHHHHHHHHHHHHHHH
Confidence 45566666666665 688776543 257777766665579999999999889999999999999999999999999
Q ss_pred hhcccc
Q 012182 456 ESFSSI 461 (469)
Q Consensus 456 ~~~~~~ 461 (469)
.+|-..
T Consensus 425 ~~~~~~ 430 (433)
T 3pfo_A 425 AEWCGL 430 (433)
T ss_dssp HHHHCE
T ss_pred HHHhcc
Confidence 887554
No 31
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=97.98 E-value=4.3e-05 Score=79.17 Aligned_cols=80 Identities=16% Similarity=0.076 Sum_probs=66.3
Q ss_pred ccCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEechhhccccchhhhcCHHHHHHHHHHHHHH
Q 012182 375 ATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAF 454 (469)
Q Consensus 375 ~t~~~~~~~l~~ia~~~~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tidIGiP~r~MHS~~E~~~~~Dv~~~~~ll~af 454 (469)
..|..+.+.+++.+++.|++.+... .+|||.+.+... .|+|++.+|++...+|++.|.++.+|+...++++..+
T Consensus 353 ~~d~~l~~~~~~a~~~~G~~~~~~~-----~~ggtD~~~~~~-~GiP~~~~g~g~~~~H~~~E~i~~~~l~~~~~~~~~~ 426 (434)
T 3ife_A 353 EPVREIVDIAYEAMKSLNIEPNIHP-----IRGGTDGSQLSY-MGLPTPNIFTGGENYHGKFEYVSVDVMEKAVQVIIEI 426 (434)
T ss_dssp GGGTHHHHHHHHHHHHTTCCCEECC-----BSSCCHHHHHHH-TTCCCCEECCSEESTTSTTCEEEHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCEEee-----cccCchHHHHhh-CCCcEEEeCCCCCCCcCCceeecHHHHHHHHHHHHHH
Confidence 3466778888888888888766432 367887776664 7999999999999999999999999999999999999
Q ss_pred Hhhccc
Q 012182 455 YESFSS 460 (469)
Q Consensus 455 ~~~~~~ 460 (469)
+..+.+
T Consensus 427 l~~la~ 432 (434)
T 3ife_A 427 ARRFEE 432 (434)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 987754
No 32
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=97.75 E-value=0.00019 Score=75.92 Aligned_cols=81 Identities=11% Similarity=0.138 Sum_probs=67.3
Q ss_pred ccCHHHHHHHHHHHHHC-CCCEeEEEeecCCCCCCChHHHHhcCC-CCcEEEechhhccccchhhhcCHHHHHHHHHHHH
Q 012182 375 ATSGVTAFLFKEIAKLH-NLPTQEFVVRNDMGCGSTIGPILASGV-GIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFK 452 (469)
Q Consensus 375 ~t~~~~~~~l~~ia~~~-~Ip~Q~~v~r~D~~gGgTig~i~~s~~-Gi~tidIGiP~r~MHS~~E~~~~~Dv~~~~~ll~ 452 (469)
..|..+...+++.+++. |.+.+.... +|||.+.+.+... |++++.+|+-...+|+|.|-++++|++.+++++.
T Consensus 406 ~~d~~lv~~l~~a~~~~~G~~~~~~~~-----ggg~d~~~~~~~~p~~~~v~fGp~~~~~H~p~E~v~i~~l~~~~~~l~ 480 (490)
T 3mru_A 406 DADSEIMAIFRDMYEGIYGHKPNIMVI-----HAGLECGLFKEPYPNMDMVSFGPTIKFPHSPDEKVKIDTVQLFWDQMV 480 (490)
T ss_dssp CTTCHHHHHHHHHHHTTSSSCCCCEEE-----SSCCHHHHTTSSCTTCEEEECCCCEESTTSTTCEEEHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCeEEEE-----EecHHHHHHHHhCCCCCEEEECCCCCCCCCCCccccHHHHHHHHHHHH
Confidence 44567888888888886 887776653 6778766666543 8999999999999999999999999999999999
Q ss_pred HHHhhccc
Q 012182 453 AFYESFSS 460 (469)
Q Consensus 453 af~~~~~~ 460 (469)
++++++.+
T Consensus 481 ~~l~~l~~ 488 (490)
T 3mru_A 481 ALLEAIPE 488 (490)
T ss_dssp HHHHHCCC
T ss_pred HHHHHhhh
Confidence 99998753
No 33
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=97.66 E-value=9.4e-05 Score=74.27 Aligned_cols=94 Identities=16% Similarity=0.192 Sum_probs=73.4
Q ss_pred CCCCceEEEcCC--CCcccCHHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEechhhccccchh
Q 012182 360 MQKGLVIKHNAN--QRYATSGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVR 436 (469)
Q Consensus 360 LG~GpvIk~~~~--~~y~t~~~~~~~l~~ia~~-~~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tidIGiP~r~MHS~~ 436 (469)
.|.++.+..... .-...|..+.+.+++.+++ .|++.|... .+|||.+.++.. .|+|++.+|++..++|++.
T Consensus 279 ~g~~~~i~~~~~~~p~~~~~~~l~~~l~~a~~~~~g~~~~~~~-----~~g~tDa~~~~~-~g~~~v~~Gp~~~~~H~~~ 352 (377)
T 3isz_A 279 HNLKYRIEWNLSGKPFLTKPGKLLDSITSAIEETIGITPKAET-----GGGTSDGRFIAL-MGAEVVEFGPLNSTIHKVN 352 (377)
T ss_dssp TTCCEEEEEEECCCCEECCTTHHHHHHHHHHHHHHSCCCEEEE-----CSSCCSHHHHHT-TTCEEEECCSBCTTTTSTT
T ss_pred cCCCeEEEEEecCCCCcCCCCHHHHHHHHHHHHHhCCCCeeec-----cCcccHHHHHHH-cCCCEEEECCCCCcccCCC
Confidence 455566654311 1123467788999998888 799998754 367787766654 6999999999999999999
Q ss_pred hhcCHHHHHHHHHHHHHHHhhcc
Q 012182 437 EICGTEDIDIAYRHFKAFYESFS 459 (469)
Q Consensus 437 E~~~~~Dv~~~~~ll~af~~~~~ 459 (469)
|.++.+|+..+++++..++.++-
T Consensus 353 E~i~~~~l~~~~~i~~~~i~~ll 375 (377)
T 3isz_A 353 ECVSVEDLGKCGEIYHKMLVNLL 375 (377)
T ss_dssp CEEEHHHHHHHHHHHHHHHHHHT
T ss_pred CcEEHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998753
No 34
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=97.65 E-value=8.1e-05 Score=74.43 Aligned_cols=162 Identities=13% Similarity=0.023 Sum_probs=99.6
Q ss_pred eeeccccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCc-------------ccccccCCcchHHHHHHHH
Q 012182 247 IFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGS-------------DSYQGAGAPTMFQAIRRIV 313 (469)
Q Consensus 247 I~~~~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGs-------------rga~gA~s~~~~dil~ri~ 313 (469)
+.-.+.||..||.++|++++.+... .....+.+++|+.||.|+ .|++.-+..
T Consensus 121 ~~~Ga~D~~sGva~~Le~ar~l~~~-----~~~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~~---------- 185 (309)
T 3tc8_A 121 PLDGADDGGSGVGALLEIARQIGQK-----APGIGIDIIFFDAEDYGTPEFVTDYTPDSWCLGTQFWAKN---------- 185 (309)
T ss_dssp CCCCTTTTHHHHHHHHHHHHHHHHS-----CCSSEEEEEEECSCSCSCCTTCCSCCTTCSCHHHHHHHHS----------
T ss_pred cccCcccchHhHHHHHHHHHHHHhC-----CCCCcEEEEEECccccccccccccccccccchhHHHHHhC----------
Confidence 3457789999999999998887532 135567899999999998 444321111
Q ss_pred hcccccCCchhhhhhhccCceEEEEecCCCCCCCCCccccCCCCCcCCCCceEEEcCCCCcccCHHHHHHHHHHHHHCCC
Q 012182 314 GSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNL 393 (469)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~s~~IS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~I 393 (469)
+ . . .......+|.+|+.-+.+|.+. ..|. ...+ .+.+...+.+.|++.|+
T Consensus 186 --~-----~-~---~~~~~~~~inlD~~G~~~~~~~-----------~~~~------~~~~--~~~l~~~~~~~a~~~g~ 235 (309)
T 3tc8_A 186 --P-----H-V---PNYTAEYGILLDMVGGKNATFF-----------KEQQ------SLRA--AAPIVEMVWSAARDLGY 235 (309)
T ss_dssp --C-----S-S---TTCCCSEEEEEESCCBTTCCEE-----------ECHH------HHHH--HHHHHHHHHHHHHHHTC
T ss_pred --C-----C-c---cccceEEEEEecccCCCCCcee-----------eccc------ccch--HHHHHHHHHHHHHHcCC
Confidence 0 0 0 0123356899998777654321 1111 0011 13456667778888887
Q ss_pred CEeEEEeecCCCCCCChHHHHhcCCCCcEEEechhh---------ccccchh---hhcCHHHHHHHHHHHHHHHh
Q 012182 394 PTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQ---------LSMHSVR---EICGTEDIDIAYRHFKAFYE 456 (469)
Q Consensus 394 p~Q~~v~r~D~~gGgTig~i~~s~~Gi~tidIGiP~---------r~MHS~~---E~~~~~Dv~~~~~ll~af~~ 456 (469)
+.+. .........+.-.++... .|||++++ +|. .+.|++. |.++...+....+++.+++-
T Consensus 236 ~~~f-~~~~~g~~~sDh~~f~~~-~GiP~~~l-i~~~~~~~~~~~~~~Ht~~Dt~d~id~~~l~~~~~~~~~~vy 307 (309)
T 3tc8_A 236 GKYF-INAAGGAITDDHQYVISG-RNIPSIDI-INYDPESKTGFASYWHTQKDNMENIDRETLKAAGQTVLEVIY 307 (309)
T ss_dssp TTTE-EEEECCCCCCHHHHHHHH-HCCCEEEE-EBCCTTSSSSSCTTTTSTTCSGGGBCHHHHHHHHHHHHHHHH
T ss_pred ccee-ccCCCCCCCCccHHHHhc-CCCCEEEE-ecccCcccCCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHh
Confidence 5322 111100112334555541 69999998 332 6799999 88888888888888887763
No 35
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=97.51 E-value=0.001 Score=69.89 Aligned_cols=78 Identities=14% Similarity=0.037 Sum_probs=61.7
Q ss_pred CHHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCChHHHHh-cCCCCcEEEechhhccccchhhhcCHHHHHHHHHHHHHH
Q 012182 377 SGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILA-SGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAF 454 (469)
Q Consensus 377 ~~~~~~~l~~ia~~-~~Ip~Q~~v~r~D~~gGgTig~i~~-s~~Gi~tidIGiP~r~MHS~~E~~~~~Dv~~~~~ll~af 454 (469)
|..+...+++.+++ .|.+...... +|||.+.++. ..-|+|++.+|.....+|++.|-++.+|+...++++..+
T Consensus 406 d~~l~~~~~~~~~~~~G~~~~~~~~-----~gg~D~~~~~~~~pg~~~v~~Gp~~~~~H~~~E~v~~~~l~~~~~~~~~~ 480 (487)
T 2qyv_A 406 HSDILDLTKTIYAQVLGTDPEIKVI-----HAGLECGLLKKIYPTIDMVSIGPTIRNAHSPDEKVHIPAVETYWKVLTGI 480 (487)
T ss_dssp CCHHHHHHHHHHHHHHSSCCEEEEE-----SSCCTHHHHHHHCTTSEEEECCCCEESTTSTTCEEEHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCeEEEE-----eccccHHHHHhhCCCCCEEEECCCCCCCCCCCceeEHHHHHHHHHHHHHH
Confidence 67788888888887 6777654432 5677544444 336899999998777899999999999999999999999
Q ss_pred Hhhcc
Q 012182 455 YESFS 459 (469)
Q Consensus 455 ~~~~~ 459 (469)
+..+.
T Consensus 481 l~~l~ 485 (487)
T 2qyv_A 481 LAHIP 485 (487)
T ss_dssp HHHCC
T ss_pred HHHHh
Confidence 98764
No 36
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=97.47 E-value=0.00048 Score=55.67 Aligned_cols=76 Identities=12% Similarity=0.083 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEechhh---ccccchhhhcCHHHHHHHHHHHHHHHh
Q 012182 380 TAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQ---LSMHSVREICGTEDIDIAYRHFKAFYE 456 (469)
Q Consensus 380 ~~~~l~~ia~~~~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tidIGiP~---r~MHS~~E~~~~~Dv~~~~~ll~af~~ 456 (469)
+...+++.+++.|++..... .+|+|.+.+... .|+|++.+|.-. ..+|++.|-++++|+..+++++..++.
T Consensus 3 ~v~~l~~a~~~~g~~~~~~~-----~~g~TDar~~~~-~gip~v~fGPg~~~~~~~H~~dE~v~i~~l~~~~~iy~~~i~ 76 (88)
T 1q7l_B 3 WWAAFSRVCKDMNLTLEPEI-----MPAAGDNRYIRA-VGVPALGFSPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLLP 76 (88)
T ss_dssp HHHHHHHHHHHTTCCEEEEE-----CCSCSHHHHHHH-TTCCEEEECCCCSCCCCTTSTTCEEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCeeEeee-----eceeCcHHHHHH-cCCCEEEECCCCCCcccccCCCCeeEHHHHHHHHHHHHHHHH
Confidence 45667777777788887765 378898888765 699999999864 369999999999999999999999999
Q ss_pred hcccc
Q 012182 457 SFSSI 461 (469)
Q Consensus 457 ~~~~~ 461 (469)
++...
T Consensus 77 ~~~~~ 81 (88)
T 1q7l_B 77 ALASV 81 (88)
T ss_dssp HHHTC
T ss_pred HHHcC
Confidence 88664
No 37
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=96.82 E-value=0.002 Score=64.44 Aligned_cols=160 Identities=15% Similarity=-0.009 Sum_probs=76.9
Q ss_pred eeeccccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCc--------------ccccccCCcchHHHHHHH
Q 012182 247 IFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGS--------------DSYQGAGAPTMFQAIRRI 312 (469)
Q Consensus 247 I~~~~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGs--------------rga~gA~s~~~~dil~ri 312 (469)
+.-.+.||..||.++|++++.+... .....+.+++|+.||.|+ .|++--+..
T Consensus 123 ~~~GA~D~~sGva~~Le~ar~l~~~-----~~~~~i~fv~~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~~--------- 188 (314)
T 3gux_A 123 PILGVNDGASGVGVLLEIARQIQKE-----QPALGIDIVFFDSEDYGIPEFYDGKYKQDTWCLGSQYWART--------- 188 (314)
T ss_dssp -------CHHHHHHHHHHHHHHHHS-----CCSSEEEEEEECSCCC-----------CTTSCHHHHHHHHS---------
T ss_pred ccCCCcccHHHHHHHHHHHHHHHhC-----CCCCcEEEEEECCccccccccccccccccccchhHHHHHhC---------
Confidence 4457789999999999998887542 145567899999999998 444321110
Q ss_pred HhcccccCCchhhhhhhccCceEEEEecCCCCCCCCCccccCCCCCcCCCCceEEEcCCCCcccCHHHHHHHHHHHHHCC
Q 012182 313 VGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHN 392 (469)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~s~~IS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~ 392 (469)
+. . ......++|.+|+.-..+|.+. ..|+ ...+ .+.+...+.+.++..+
T Consensus 189 ---~~----~-----~~~~~~~~inlDm~G~~~~~~~-----------~~g~------~~~~--~~~l~~~~~~~~~~~g 237 (314)
T 3gux_A 189 ---PH----V-----QNYNARYGILLDMVGGKDATFY-----------YEGY------SART--ARSEMKKIWKKAHELG 237 (314)
T ss_dssp ---CS----S-----TTCCCSEEEEEESCCBTTCCEE-----------ECTT------HHHH--CHHHHHHHHHHHHHHT
T ss_pred ---Cc----c-----cccceeEEEEEeccCCCCCcee-----------eecc------cccc--HHHHHHHHHHHHHHcC
Confidence 00 0 0123356899998777654321 0121 0011 2456677777888887
Q ss_pred CCEeEEEeecCCCCCCChHHHHhcCCCCcEEEech--h-------hccccchhhhcCHHHHHHHHHHHHH
Q 012182 393 LPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGI--A-------QLSMHSVREICGTEDIDIAYRHFKA 453 (469)
Q Consensus 393 Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tidIGi--P-------~r~MHS~~E~~~~~Dv~~~~~ll~a 453 (469)
+... |.........++-.|+... .|||++++.. | --+-|++.-+++.-|...+.+..+.
T Consensus 238 ~~~~-f~~~~~~~~~sDh~pF~~~-~GiP~l~~i~~~~~~~~~~f~~~~Ht~~Dt~d~id~~~l~~~~~~ 305 (314)
T 3gux_A 238 YGKY-FVKEDGGETVDDHIYVNKL-ARIPCVDIINYDAGNPQSSFGSFWHTVNDTMENIDRNTLKAVGQT 305 (314)
T ss_dssp CTTT-EEEEECCCCCCHHHHHHHH-SCCCEEEEEBCC--------------------CBCHHHHHHHHHH
T ss_pred Cccc-cccccCCCCCCccHHHHhc-CCCceEEEecccccccccCCCCCCCCCcCcchhCCHHHHHHHHHH
Confidence 6421 1111100112334566542 6999999932 1 1568998866665555555444433
No 38
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=96.71 E-value=0.0021 Score=65.76 Aligned_cols=78 Identities=12% Similarity=-0.075 Sum_probs=64.9
Q ss_pred ccCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEechhhc--cccchhhhcCHHHHHHHHHHHH
Q 012182 375 ATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQL--SMHSVREICGTEDIDIAYRHFK 452 (469)
Q Consensus 375 ~t~~~~~~~l~~ia~~~~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tidIGiP~r--~MHS~~E~~~~~Dv~~~~~ll~ 452 (469)
..|+.+.+.+++.+++.|++++.... +|||.+.+.+. . +|++.+++|.. ++|++.|.++.+|+...++++.
T Consensus 327 ~~d~~l~~~~~~a~~~~g~~~~~~~~-----~ggtD~~~~~~-~-iP~~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~ 399 (408)
T 3n5f_A 327 LCSDEVKRAAEAACQKLGYPSFWLPS-----GAAHDSVQLAP-I-CPIGMIFVRSQDGVSHSPAEWSTKEDCAAGAEVLY 399 (408)
T ss_dssp ECCHHHHHHHHHHHHHHTCCCCEEEE-----SSCCTTTTTTT-T-SCEEEEEECCGGGCCSSTTCCCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCcccCCC-----cCchHHHHHHH-H-CCEEEEEeCCCCCCCCCccccCCHHHHHHHHHHHH
Confidence 45788999999999999998875432 57776655543 3 99999999987 8999999999999999999999
Q ss_pred HHHhhcc
Q 012182 453 AFYESFS 459 (469)
Q Consensus 453 af~~~~~ 459 (469)
.++..+.
T Consensus 400 ~~~~~l~ 406 (408)
T 3n5f_A 400 HTVWQLA 406 (408)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9998764
No 39
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=96.63 E-value=0.01 Score=58.80 Aligned_cols=165 Identities=12% Similarity=-0.040 Sum_probs=92.5
Q ss_pred eccccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCcchHHHHHH--HHhcccccCCchhhh
Q 012182 249 SGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRR--IVGSLAHEHVSETSF 326 (469)
Q Consensus 249 ~~~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~gA~s~~~~dil~r--i~~~~~~~~~~~~~~ 326 (469)
-.+-||-.||.++||+++.+.+. .....+.++||+.||.|+.|..++........+-. ..... .
T Consensus 123 ~GA~D~aSG~a~lLE~ar~l~~~-----~~~~~i~~~~~~~EE~Gl~~~~~~~~~~~~~l~GS~~~~~~~---------~ 188 (309)
T 4fuu_A 123 LGANDGASGVGALLEIARLVNQQ-----QPELGIDIIFLDAEDYGTPQFYEGKHKEEAWCLGSQYWSRNP---------H 188 (309)
T ss_dssp CCTTTTHHHHHHHHHHHHHHHHS-----CCSSEEEEEEECSSSCCCCTTCCSCCCGGGSCHHHHHHHHSC---------S
T ss_pred CCcccCchhHHHHHHHHHHHhhc-----CCCCceEEEeecccccCccccccchhhhhhhhcchhHHHhcc---------c
Confidence 35779999999999998887542 24556789999999999988776654322211100 00000 0
Q ss_pred hhhccCceEEEEecCCCCCCCCCccccCCCCCcCCCCceEEEcCCCCcccCHHHHHHHHHHHHHCCCCEeEEEeecCCCC
Q 012182 327 ECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGC 406 (469)
Q Consensus 327 ~~~~~~s~~IS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~v~r~D~~g 406 (469)
.....-..+|-.|+.-+.+|.+ .... ......+.+...+.+.+...+........+ ...
T Consensus 189 ~~~~~i~~~inlDmvG~~~~~~------------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 247 (309)
T 4fuu_A 189 VQGYNARFGILLDMVGGENSVF------------------LKEG-YSEEFAPDINKKVWKAAKKAGYGKTFIDER--GDT 247 (309)
T ss_dssp STTCCCSEEEEECSCCBTTCCE------------------EECH-HHHHHCHHHHHHHHHHHHHTTCTTTEEEEE--CCC
T ss_pred ccCcceEEEEeeeccCCCCCce------------------Eeec-CchhhhHHHHHHHHHHHHhcCCcccccccC--CCC
Confidence 0112334678888755433211 1100 011223556677777888877643221111 122
Q ss_pred CCC-hHHHHhcCCCCcEEEech-----h-hccccchhhhcCHHHHHHHHH
Q 012182 407 GST-IGPILASGVGIRTVDCGI-----A-QLSMHSVREICGTEDIDIAYR 449 (469)
Q Consensus 407 GgT-ig~i~~s~~Gi~tidIGi-----P-~r~MHS~~E~~~~~Dv~~~~~ 449 (469)
+++ -.++.. ..|||++++.. + -.+-|++.-+.+.-|.+.+..
T Consensus 248 ~~sDh~~F~~-~~GIP~l~~~~~~~~~~~~~~yHT~~Dt~d~id~~~L~~ 296 (309)
T 4fuu_A 248 ITDDHLFINR-LARIKTIDIIPNDPETGFPPTWHTIHDNMDHIDKNTLKA 296 (309)
T ss_dssp CCCHHHHHHH-HTCCCEEEECBC----CCCTTTTSTTCSGGGBCHHHHHH
T ss_pred CCCChHHHHh-cCCCCEEEEeccCCCCCCCCCCCCcccchhhCCHHHHHH
Confidence 233 345543 36999999832 1 124699987777666655443
No 40
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=96.50 E-value=0.0071 Score=61.90 Aligned_cols=79 Identities=11% Similarity=0.064 Sum_probs=65.2
Q ss_pred ccCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEechhhc--cccchhhhcCHHHHHHHHHHHH
Q 012182 375 ATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQL--SMHSVREICGTEDIDIAYRHFK 452 (469)
Q Consensus 375 ~t~~~~~~~l~~ia~~~~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tidIGiP~r--~MHS~~E~~~~~Dv~~~~~ll~ 452 (469)
..|+.+.+.+++.+++.|++++... .+|||.+.+.+. . +|++.+..|.. ++|++.|.++.+|+...++++.
T Consensus 331 ~~~~~l~~~~~~~~~~~g~~~~~~~-----~~ggtD~~~~~~-~-~p~~~~~~p~~~~~~H~~~E~i~~~~l~~~~~~~~ 403 (423)
T 1z2l_A 331 PMNKELVATLTELCEREKLNYRVMH-----SGAGHDAQIFAP-R-VPTCMIFIPSINGISHNPAERTNITDLAEGVKTLA 403 (423)
T ss_dssp ECCHHHHHHHHHHHHHTTCCEEEEE-----ESSCCTHHHHTT-T-SCEEEEEECCGGGCCSSTTCCCCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCeEEec-----CCCcccHHHHHh-h-CCEEEEEeCCCCCCCCCccccCCHHHHHHHHHHHH
Confidence 4578899999999999999987644 267777666554 3 99988877776 6999999999999999999999
Q ss_pred HHHhhccc
Q 012182 453 AFYESFSS 460 (469)
Q Consensus 453 af~~~~~~ 460 (469)
.++..+..
T Consensus 404 ~~~~~l~~ 411 (423)
T 1z2l_A 404 LMLYQLAW 411 (423)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHh
Confidence 99987754
No 41
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=96.05 E-value=0.012 Score=59.13 Aligned_cols=48 Identities=19% Similarity=0.047 Sum_probs=34.3
Q ss_pred ccccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccc
Q 012182 250 GRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSY 297 (469)
Q Consensus 250 ~~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga 297 (469)
++-||=.||.++||+.+.+.+.......+...+.++||+.||.|.++.
T Consensus 126 GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE~Gl~~~ 173 (330)
T 4fai_A 126 GATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFEEWG 173 (330)
T ss_dssp CTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESCCSCSSSCB
T ss_pred CCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEEecccccccccc
Confidence 678999999999998876632100001235567899999999998764
No 42
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=95.97 E-value=0.0052 Score=56.81 Aligned_cols=55 Identities=18% Similarity=0.094 Sum_probs=41.1
Q ss_pred Cceeeecc-ccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccC-cccccccC
Q 012182 244 NEFIFSGR-LDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVG-SDSYQGAG 301 (469)
Q Consensus 244 ~e~I~~~~-lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVG-srga~gA~ 301 (469)
++++.|++ .||+.+++++++|+..+.+... .....++++|+.+||+| ++|+.-..
T Consensus 103 ~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~~---~~~~~v~~~~~~~EE~g~~~Ga~~~~ 159 (198)
T 1q7l_A 103 EGYIYARGAQDMKCVSIQYLEAVRRLKVEGH---RFPRTIHMTFVPDEEVGGHQGMELFV 159 (198)
T ss_dssp TSEEECTTTTTTHHHHHHHHHHHHHHHHTTC---CCSSCEEEEEESCGGGTSTTTHHHHT
T ss_pred CCEEEeCcchhchHHHHHHHHHHHHHHHcCC---CCCCCEEEEEEcccccCccccHHHHH
Confidence 45788877 9999999999999988753210 13456789999999998 57766443
No 43
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=95.83 E-value=0.026 Score=56.82 Aligned_cols=174 Identities=13% Similarity=0.055 Sum_probs=94.3
Q ss_pred eeccccchhcHHHHHHHHHHcCCCCC--CCCCCCceEEEEEEecccc--------CcccccccCCcchHHHHHHHHhccc
Q 012182 248 FSGRLDNLASSYCGLRALIDSCVSPS--NLSSEHAIRMVALFDNEEV--------GSDSYQGAGAPTMFQAIRRIVGSLA 317 (469)
Q Consensus 248 ~~~~lDnr~g~~~~leal~~~~~~~~--~~~~~~~~~~~v~~dqEEV--------Gsrga~gA~s~~~~dil~ri~~~~~ 317 (469)
.-.+.||-.||.++||+++.+..... .-......+.+++|+.||. |+.|++.-+.. +....-
T Consensus 129 ~~GA~D~asGva~lLe~ar~l~~~~~~~~~~~~~~~i~fv~~~~EE~f~~w~~~~gl~GS~~~a~~--------~~~~~~ 200 (330)
T 3pb6_X 129 FVGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQLLFLDGEEALKEWGPKDSLYGSRHLAQL--------MESIPH 200 (330)
T ss_dssp CCCTTTTHHHHHHHHHHHHHTHHHHHHHHHTTCSEEEEEEEESCCSCSSCCSTTSSCHHHHHHHHH--------HHHSBC
T ss_pred cCCCcCChHHHHHHHHHHHHHHHHHhhcccCCCCCcEEEEEEcCcccccccCCCCCCccHHHHHHH--------HHhcCC
Confidence 34678999999999999887743000 0002455678999999999 77766533221 111000
Q ss_pred ccCCchhhhhhhccCceEEEEecCCCCCCCCCccccCCCCCcCCCCceEEEcCCCCcccCHHHH---HHHHHHHHHCCC-
Q 012182 318 HEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTA---FLFKEIAKLHNL- 393 (469)
Q Consensus 318 ~~~~~~~~~~~~~~~s~~IS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~---~~l~~ia~~~~I- 393 (469)
.. .....-.-..+|-.|+.-..+|.+... |....... ..+.+.+++.|.
T Consensus 201 ----~~-~~~~~~~i~~~inlDmiG~~~~~~~~~----------------------~~~t~~~~~~l~~i~~~~~~~g~~ 253 (330)
T 3pb6_X 201 ----SP-GPTRIQAIELFMLLDLLGAPNPTFYSH----------------------FPRTVRWFHRLRSIEKRLHRLNLL 253 (330)
T ss_dssp ----SS-CSBTTTTEEEEEEEESCSSSSCCBCCC----------------------CGGGHHHHHHHHHHHHHHHHTTCC
T ss_pred ----cc-ccchhhCeEEEEeccCCCCCCCCceee----------------------cCcchHHHHHHHHHHHHHHHcCcc
Confidence 00 000011225689999988766543210 11111222 223333444444
Q ss_pred ---CE--eEEEe-ecCCCCCCChHHHHhcCCCCcEEEech-hh-ccccchhh---hcCHHHHHHHHHHHHHHHhhc
Q 012182 394 ---PT--QEFVV-RNDMGCGSTIGPILASGVGIRTVDCGI-AQ-LSMHSVRE---ICGTEDIDIAYRHFKAFYESF 458 (469)
Q Consensus 394 ---p~--Q~~v~-r~D~~gGgTig~i~~s~~Gi~tidIGi-P~-r~MHS~~E---~~~~~Dv~~~~~ll~af~~~~ 458 (469)
|. ++|.. .......++=.|+.. .|||++.+.. |- .+-|++.- .++...+....+++.+|.-++
T Consensus 254 ~~~p~~~~~f~~~~~~~~~~SDH~pF~~--~GIP~~~~~~~~f~~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~Ey 327 (330)
T 3pb6_X 254 QSHPQEVMYFQPGEPFGSVEDDHIPFLR--RGVPVLHLISTPFPAVWHTPADTEVNLHPPTVHNLCRILAVFLAEY 327 (330)
T ss_dssp SSCCSSCSSBCSSCSSCCCSCTTHHHHT--TTCCEEEEECSSCCTTTTSTTCSGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCcccccccccccCCCCCCchHhHHH--CCCCEEEEEcCCCCCCCCCCcCchhhCCHHHHHHHHHHHHHHHHHH
Confidence 21 22221 111122344467765 7999999864 32 35699865 566677777788888887654
No 44
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=95.55 E-value=0.09 Score=51.84 Aligned_cols=48 Identities=17% Similarity=0.037 Sum_probs=33.7
Q ss_pred eccccchhcHHHHHHHHHHcCCCCC--CCCCCCceEEEEEEeccccCccc
Q 012182 249 SGRLDNLASSYCGLRALIDSCVSPS--NLSSEHAIRMVALFDNEEVGSDS 296 (469)
Q Consensus 249 ~~~lDnr~g~~~~leal~~~~~~~~--~~~~~~~~~~~v~~dqEEVGsrg 296 (469)
-++-||=.||.++||+++.+..... .-..+...+.+++|+.||.|..+
T Consensus 99 ~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fdaEE~G~~~ 148 (312)
T 4f9u_A 99 VGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEEAFKEW 148 (312)
T ss_dssp CCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEESCCSCSSSC
T ss_pred CCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEecCccccccC
Confidence 3678999999999998887631000 00124557889999999999554
No 45
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=95.37 E-value=0.12 Score=51.54 Aligned_cols=45 Identities=22% Similarity=0.153 Sum_probs=31.4
Q ss_pred eeccccchhcHHHHHHHHHHcCCCCCCC-----CCCCceEEEEEEecccc
Q 012182 248 FSGRLDNLASSYCGLRALIDSCVSPSNL-----SSEHAIRMVALFDNEEV 292 (469)
Q Consensus 248 ~~~~lDnr~g~~~~leal~~~~~~~~~~-----~~~~~~~~~v~~dqEEV 292 (469)
.-.+.||-.||.++|++++.+......+ ......+.+++|+.||.
T Consensus 122 ~~Ga~D~~sGva~~le~ar~l~~~~~~~~~~~g~~~~~~i~~~~~~~EE~ 171 (329)
T 2afw_A 122 FVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEA 171 (329)
T ss_dssp CCCTTTTHHHHHHHHHHHHHTHHHHHTTC------CCEEEEEEEESCCSC
T ss_pred CCCcccchhhHHHHHHHHHHHHHHHhhhcccccCCCCccEEEEEecCccc
Confidence 4567899999999999988764210000 01345678999999998
No 46
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=95.08 E-value=0.029 Score=62.07 Aligned_cols=52 Identities=15% Similarity=-0.036 Sum_probs=36.4
Q ss_pred ccccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccC
Q 012182 250 GRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAG 301 (469)
Q Consensus 250 ~~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~gA~ 301 (469)
.+.||-.||.++||+++.+......--.+...+++++|+.||.|+.|++.-.
T Consensus 341 Ga~D~~sG~a~lLe~ar~l~~~~~~g~~p~r~I~f~~~~~EE~Gl~GS~~~~ 392 (707)
T 3fed_A 341 GAIDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIFASWDAEEFGLLGSTEWA 392 (707)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHHHHHH
T ss_pred CCccCcHHHHHHHHHHHHHHhhhhccCCCCCCEEEEEeCCccccchhHHHHH
Confidence 4789999999999977765320000002456788999999999998877443
No 47
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=95.08 E-value=0.017 Score=58.61 Aligned_cols=79 Identities=10% Similarity=0.140 Sum_probs=59.0
Q ss_pred CHHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEechhhccccchhhhcCHHHHHHHHHHHHHHH
Q 012182 377 SGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFY 455 (469)
Q Consensus 377 ~~~~~~~l~~ia~~-~~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tidIGiP~r~MHS~~E~~~~~Dv~~~~~ll~af~ 455 (469)
|..+...+++.+++ .|++.+... .+|+|.+.+... .|+|++.+|..-..+|++.|-++.+|+..+++++..++
T Consensus 301 ~~~l~~~~~~~~~~~~g~~~~~~~-----~~g~~D~~~~~~-~~~P~v~~Gp~~~~~H~~~E~i~~~~l~~~~~~~~~~l 374 (393)
T 1vgy_A 301 AGKLTDVARAAIAETCGIEAELST-----TGGTSDGRFIKA-MAQELIELGPSNATIHQINENVRLNDIPKLSAVYEGIL 374 (393)
T ss_dssp SSHHHHHHHHHHHHHHSSCCEEEC-----CSCCCTHHHHGG-GEEEEEECCSBCTTTTSTTCEEETTHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCCceEec-----CCccchHHHHHh-CCCCEEEECCCCCCCCCCCCceeHHHHHHHHHHHHHHH
Confidence 44555666666655 366554322 357777766654 68999999998888999999999999999999999999
Q ss_pred hhcccc
Q 012182 456 ESFSSI 461 (469)
Q Consensus 456 ~~~~~~ 461 (469)
..+...
T Consensus 375 ~~l~~~ 380 (393)
T 1vgy_A 375 VRLLAG 380 (393)
T ss_dssp HHHC--
T ss_pred HHHhcc
Confidence 887643
No 48
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=94.97 E-value=0.049 Score=56.88 Aligned_cols=79 Identities=11% Similarity=-0.009 Sum_probs=63.1
Q ss_pred ccCHHHHHHHHHHHHHCC-C-CEeEEEeecCCCCCCChHHHHhcCCCCcEEEechhhcc--ccchhhhcCHHHHHHHHHH
Q 012182 375 ATSGVTAFLFKEIAKLHN-L-PTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLS--MHSVREICGTEDIDIAYRH 450 (469)
Q Consensus 375 ~t~~~~~~~l~~ia~~~~-I-p~Q~~v~r~D~~gGgTig~i~~s~~Gi~tidIGiP~r~--MHS~~E~~~~~Dv~~~~~l 450 (469)
..|..+.+.+++.+++.| + +.+.... +|||.+.+.+. . +|++.+..|... +|++.|.++.+|+...+++
T Consensus 365 ~~d~~l~~~~~~a~~~~G~~~~~~~~~~-----~ggtD~~~~~~-~-~P~~~~fgp~~~~~~H~p~E~i~~~~l~~~~~~ 437 (474)
T 2v8h_A 365 NFHEVCIECVSRSAFAQFKKDQVRQIWS-----GAGHDSCQTAP-H-VPTSMIFIPSKDGLSHNYYEYSSPEEIENGFKV 437 (474)
T ss_dssp ECCHHHHHHHHHHHHHHSCGGGEEEEEE-----SSCCTHHHHTT-T-SCEEEEEECCGGGCCSSTTCCCCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCCcceecCC-----cCCccHHHHHh-h-CCEEEEEeCCCCCCCCCccccCCHHHHHHHHHH
Confidence 457888999999999888 7 7765542 67776666554 3 999877777653 8999999999999999999
Q ss_pred HHHHHhhccc
Q 012182 451 FKAFYESFSS 460 (469)
Q Consensus 451 l~af~~~~~~ 460 (469)
+..++..+..
T Consensus 438 ~~~~l~~l~~ 447 (474)
T 2v8h_A 438 LLQAIINYDN 447 (474)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999877654
No 49
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=94.07 E-value=0.018 Score=63.03 Aligned_cols=146 Identities=12% Similarity=0.034 Sum_probs=82.8
Q ss_pred ccccchhcHHHHHHHHHHcCCC--CCCCCCCCceEEEEEEeccccCcccccccCCcchHHHHHHHHhcccccCCchhhhh
Q 012182 250 GRLDNLASSYCGLRALIDSCVS--PSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFE 327 (469)
Q Consensus 250 ~~lDnr~g~~~~leal~~~~~~--~~~~~~~~~~~~~v~~dqEEVGsrga~gA~s~~~~dil~ri~~~~~~~~~~~~~~~ 327 (469)
.+.||-.|+.++||+++.+... ... ..+...+++++++.||.|+.|++.-....... ..
T Consensus 295 Ga~D~~sG~a~lLe~ar~l~~~~~~~g-~~p~r~I~f~~~~~EE~gl~GS~~~~~~~~~~------------------l~ 355 (640)
T 3kas_A 295 GAAKSGVGTALLLKLAQMFSDMVLKDG-FQPSRSIIFASWSAGDFGSVGATEWLEGYLSS------------------LH 355 (640)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHHHTSC-CCCSEEEEEEEESSGGGTSHHHHHHHHHTTTT------------------GG
T ss_pred CCCcCcHHHHHHHHHHHHHHHhhhhcC-CCCCCcEEEEEECCcccCchhHHHHHHhhhhh------------------hh
Confidence 4679999999999987766420 000 12456788999999999998876322111000 00
Q ss_pred hhccCceEEEEecCCCCCCCCCccccCCCCCcCCCCceEEEcCCCCcccCHHHHHHHHHHHHHCCCCEe--E-E-----E
Q 012182 328 CTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQ--E-F-----V 399 (469)
Q Consensus 328 ~~~~~s~~IS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q--~-~-----v 399 (469)
-+--..|.+|++.. |. ..+.. .+++.+...+++++++..-|.. . + .
T Consensus 356 --~~~~a~iNlD~~~~-----------------G~-~~l~~------~~~p~l~~l~~~~~~~v~~P~~~~tl~~~~~w~ 409 (640)
T 3kas_A 356 --LKAFTYINLDKAVL-----------------GT-SNFKV------SASPLLYTLIEKTMQNVKHPVTGQFLYQDSNWA 409 (640)
T ss_dssp --GTEEEEEECTTCBS-----------------CS-SEEEE------EECGGGHHHHHHHHTTCBCTTTCSBSCCCTTGG
T ss_pred --hCEEEEEecccCcc-----------------CC-CceEE------EeCHHHHHHHHHHHHhCCCCCCCCceecccccc
Confidence 01123466664321 11 12322 2355667888888887766642 1 1 0
Q ss_pred eecC-CCCCCChHHHHhcCCCCcEEEechhh----ccccchhhhcCH
Q 012182 400 VRND-MGCGSTIGPILASGVGIRTVDCGIAQ----LSMHSVREICGT 441 (469)
Q Consensus 400 ~r~D-~~gGgTig~i~~s~~Gi~tidIGiP~----r~MHS~~E~~~~ 441 (469)
.+.. .++|++..+++.. .|||+++++.-- -+-||+..+.+.
T Consensus 410 ~~~~~~~~~sD~~~F~~~-~GIP~~~~~~~~~~~y~~yHT~~Dt~~~ 455 (640)
T 3kas_A 410 SKVEKLTLDNAAFPFLAY-SGIPAVSFCFCEDTDYPYLGTTMDTYKE 455 (640)
T ss_dssp GGCCCCCTTSTHHHHHHH-HCCCEEEEEEECSSCCTTTTSTTCCHHH
T ss_pred cccCCCCCCcchHHHHHh-CCCCeeeccccCCCCCCCcCCccccHHH
Confidence 0011 2334445677653 799999998532 246898766653
No 50
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=92.92 E-value=0.098 Score=52.30 Aligned_cols=49 Identities=12% Similarity=0.106 Sum_probs=39.9
Q ss_pred CCCChHHHHhcCCCCcEEEechh-hccccchhhhcCHHHHHHHHHHHHHHHhhc
Q 012182 406 CGSTIGPILASGVGIRTVDCGIA-QLSMHSVREICGTEDIDIAYRHFKAFYESF 458 (469)
Q Consensus 406 gGgTig~i~~s~~Gi~tidIGiP-~r~MHS~~E~~~~~Dv~~~~~ll~af~~~~ 458 (469)
+|+|.+. ..|+|++-+|.. .-.+|++.|.++.+++...++++..++..+
T Consensus 305 ~g~tD~~----~~~~p~v~~G~g~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~~ 354 (356)
T 3ct9_A 305 PTLSDQA----LMSFASVKIGPGRSSRSHTAEEYIMLKEIEEAIGIYLDLLDGL 354 (356)
T ss_dssp CSCCGGG----GCCSCEEECCSSBGGGTTSTTCEEEHHHHHHHHHHHHHHHTTC
T ss_pred ccccchh----hcCCCEEEECCCccccCcCCCcEEEHHHHHHHHHHHHHHHHHh
Confidence 4666544 259999999975 346899999999999999999999988754
No 51
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=92.15 E-value=0.13 Score=51.43 Aligned_cols=73 Identities=11% Similarity=0.020 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEechhh-ccccchhhhcCHHHHHHHHHHHHHHH
Q 012182 378 GVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQ-LSMHSVREICGTEDIDIAYRHFKAFY 455 (469)
Q Consensus 378 ~~~~~~l~~ia~~-~~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tidIGiP~-r~MHS~~E~~~~~Dv~~~~~ll~af~ 455 (469)
..+.+.+++.+++ .|.+.. .. .+|+|.+.+... .|+|++.+|... -.+|++.|-++.+|+...++++..++
T Consensus 293 ~~l~~~~~~a~~~~~g~~~~-~~-----~~g~~D~~~~~~-~g~p~v~~Gpg~~~~~H~~~E~~~~~~l~~~~~~~~~~~ 365 (369)
T 2f7v_A 293 AEERRLAARDVADALDLPIG-NA-----VDFWTEASLFSA-GGYTALVYGPGDIAQAHTADEFVTLAQLQRYVESVNRII 365 (369)
T ss_dssp HHHHHHHHHHHHHHTTCCBC-CC-----BSSCCTHHHHHH-TTCCEEECCSSCGGGTTCTTCEEEHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCCCCC-cc-----ccccCcHHHHhh-CCCCEEEECCCCccccCCCCceEEHHHHHHHHHHHHHHH
Confidence 5667778888876 476653 11 357776666655 599999998744 56899999999999999999999888
Q ss_pred hh
Q 012182 456 ES 457 (469)
Q Consensus 456 ~~ 457 (469)
..
T Consensus 366 ~~ 367 (369)
T 2f7v_A 366 NG 367 (369)
T ss_dssp HC
T ss_pred Hh
Confidence 64
No 52
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=91.79 E-value=0.13 Score=53.54 Aligned_cols=77 Identities=14% Similarity=0.144 Sum_probs=53.4
Q ss_pred CHHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCC-hHHHHhcCCCCcEEEechhh--ccccchhhhcCHHHHHHHHHHHH
Q 012182 377 SGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGST-IGPILASGVGIRTVDCGIAQ--LSMHSVREICGTEDIDIAYRHFK 452 (469)
Q Consensus 377 ~~~~~~~l~~ia~~-~~Ip~Q~~v~r~D~~gGgT-ig~i~~s~~Gi~tidIGiP~--r~MHS~~E~~~~~Dv~~~~~ll~ 452 (469)
|..+...+++.+++ .|.+..... ..+|++ .+.+... .|+|++.+|.-. -.+|++.|-++.+++...++++.
T Consensus 400 d~~l~~~~~~a~~~~~g~~~~~~~----~~gg~~D~~~~~~~-~g~p~v~~G~g~~~~~~H~~~E~i~i~~l~~~~~~~~ 474 (481)
T 2pok_A 400 SAPAILNVIELAKKFYPQGVSVLP----TTAGTGPMHTVFDA-LEVPMVAFGLGNANSRDHGGDENVRIADYYTHIELVE 474 (481)
T ss_dssp CSHHHHHHHHHHTTTCTTCEEEES----CBSSCCTHHHHHHH-HCCCEEBCCSBCTTCCTTSTTCEEEHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCccccc----cCCCCCchHHHHHH-cCCCEEEecCCCcccCCCCCCCcEEHHHHHHHHHHHH
Confidence 45555666666655 355543221 134553 4445443 699999888743 67999999999999999999999
Q ss_pred HHHhhc
Q 012182 453 AFYESF 458 (469)
Q Consensus 453 af~~~~ 458 (469)
.++..+
T Consensus 475 ~~l~~l 480 (481)
T 2pok_A 475 ELIRSY 480 (481)
T ss_dssp HHHHTT
T ss_pred HHHHhc
Confidence 998765
No 53
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=91.43 E-value=0.13 Score=53.27 Aligned_cols=79 Identities=14% Similarity=-0.018 Sum_probs=53.8
Q ss_pred CHHHHHHHHHHHHHC-CCCEeEEEeecCCCCCCChH-HHHhcCCCCcEEEe--chhhccccchhhhcCHHHHHHHHHHHH
Q 012182 377 SGVTAFLFKEIAKLH-NLPTQEFVVRNDMGCGSTIG-PILASGVGIRTVDC--GIAQLSMHSVREICGTEDIDIAYRHFK 452 (469)
Q Consensus 377 ~~~~~~~l~~ia~~~-~Ip~Q~~v~r~D~~gGgTig-~i~~s~~Gi~tidI--GiP~r~MHS~~E~~~~~Dv~~~~~ll~ 452 (469)
|..+...+++.+++. |.+..... .+|++.. .+.....|+|++-+ |.+.-..|++.|-++.+|+...++++.
T Consensus 394 d~~~~~~~~~a~~~~~g~~~~~~~-----~~gs~d~~~~~~~~~~~p~~~~g~g~~~~~~H~~~E~i~~~~l~~~~~~~~ 468 (479)
T 2zog_A 394 NHPHYQAGRRALKTVFGVEPDLTR-----EGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRLNYIEGTKMLA 468 (479)
T ss_dssp TSHHHHHHHHHHHHHHSSCCEEEE-----ESSCCTHHHHHHHHHCSEEEECCCBCTTCCTTSTTCEEEHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCceecC-----CCCccchHHHHHHHhCCCEEEecCCCCccCCCCCCCcEeHHHHHHHHHHHH
Confidence 445556666666653 55443321 1455643 34433358999885 655567999999999999999999999
Q ss_pred HHHhhccc
Q 012182 453 AFYESFSS 460 (469)
Q Consensus 453 af~~~~~~ 460 (469)
.++..+..
T Consensus 469 ~~~~~~~~ 476 (479)
T 2zog_A 469 AYLYEVSQ 476 (479)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99987653
No 54
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=90.54 E-value=0.18 Score=52.51 Aligned_cols=51 Identities=16% Similarity=0.072 Sum_probs=38.3
Q ss_pred ceeeecc-ccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCccccc
Q 012182 245 EFIFSGR-LDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 298 (469)
Q Consensus 245 e~I~~~~-lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~ 298 (469)
+++.|++ .||+.+++++++|++.+.+.. ......+.++|+..||+|++|+.
T Consensus 138 g~l~grG~~D~k~g~a~~l~a~~~l~~~~---~~~~~~v~~~~~~~EE~g~~g~~ 189 (481)
T 2pok_A 138 GFMYGRGVDDDKGHITARLSALRKYMQHH---DDLPVNISFIMEGAEESASTDLD 189 (481)
T ss_dssp TEEESTTTTTTHHHHHHHHHHHHHHHHTC---SSCSSEEEEEEESCGGGTTTTHH
T ss_pred CeEEccccccCcHHHHHHHHHHHHHHHhc---CCCCCCEEEEEecccccCchhHH
Confidence 4566665 999999999999988875320 01345678999999999987764
No 55
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=89.98 E-value=0.1 Score=52.33 Aligned_cols=54 Identities=17% Similarity=0.245 Sum_probs=44.8
Q ss_pred CCCChHHHHhcCCCCcEEEechhhc-cccchhhhcCHHHHHHHHHHHHHHHhhccc
Q 012182 406 CGSTIGPILASGVGIRTVDCGIAQL-SMHSVREICGTEDIDIAYRHFKAFYESFSS 460 (469)
Q Consensus 406 gGgTig~i~~s~~Gi~tidIGiP~r-~MHS~~E~~~~~Dv~~~~~ll~af~~~~~~ 460 (469)
+|+|.+.+.+. .|+|++.+|.... .+|++.|.++.+++...++++..++..+..
T Consensus 306 ~g~~D~~~~~~-~~~p~v~~Gp~~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~~ 360 (364)
T 2rb7_A 306 HGASDARYLGE-NGLTGVVWGAEGFNTLHSRDECLHIPSLQSIYDPLMQLAREMEE 360 (364)
T ss_dssp SSCCGGGGTGG-GTCCEEECCCCCTTCTTSTTCEEETTHHHHHHHHHHHHHHHHHC
T ss_pred CCCchHHHHHh-cCCCEEEECCCCccccCCCCccccHHHHHHHHHHHHHHHHHHHh
Confidence 46676666554 5999999998766 679999999999999999999999887643
No 56
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=89.71 E-value=0.56 Score=48.72 Aligned_cols=79 Identities=15% Similarity=0.066 Sum_probs=58.6
Q ss_pred CHHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCCh-HHHHhcCC-CCcEEEech--hhccccchhhhcCHHHHHHHHHHH
Q 012182 377 SGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTI-GPILASGV-GIRTVDCGI--AQLSMHSVREICGTEDIDIAYRHF 451 (469)
Q Consensus 377 ~~~~~~~l~~ia~~-~~Ip~Q~~v~r~D~~gGgTi-g~i~~s~~-Gi~tidIGi--P~r~MHS~~E~~~~~Dv~~~~~ll 451 (469)
++.+.+.+++.+++ .|.+..... .||+.. ..++.... |+|++-+|+ |--..|++.|-++.+|+...++++
T Consensus 387 ~~~l~~~~~~a~~~~~G~~~~~~~-----~gg~d~f~~~~~~~~Pg~p~v~~G~g~~~~~~H~p~E~i~~~~l~~g~~~l 461 (472)
T 3pfe_A 387 SDWLAKAASEASMTYYDKPAAYMG-----EGGTIPFMSMLGEQFPKAQFMITGVLGPHSNAHGPNEFLHLDMVKKLTSCV 461 (472)
T ss_dssp CHHHHHHHHHHHHHHHSSCCEEEE-----ESSCCHHHHHHHHHCTTCEEEEECCBCTTCCTTSTTCEEEHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHcCCCceecc-----CCCchhhHHHHHHHcCCCCEEEecCCCCCCCCcCCCcceeHHHHHHHHHHH
Confidence 46677888888877 677665422 244442 34444334 899999886 556799999999999999999999
Q ss_pred HHHHhhccc
Q 012182 452 KAFYESFSS 460 (469)
Q Consensus 452 ~af~~~~~~ 460 (469)
..++..+.+
T Consensus 462 ~~~l~~la~ 470 (472)
T 3pfe_A 462 SYVLYSFSQ 470 (472)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 999987753
No 57
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=89.60 E-value=0.16 Score=53.42 Aligned_cols=74 Identities=15% Similarity=0.002 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHC-CCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEechh--hccccchhhhcCHHHHHHHHHHHHHH
Q 012182 378 GVTAFLFKEIAKLH-NLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIA--QLSMHSVREICGTEDIDIAYRHFKAF 454 (469)
Q Consensus 378 ~~~~~~l~~ia~~~-~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tidIGiP--~r~MHS~~E~~~~~Dv~~~~~ll~af 454 (469)
..+...+++.+++. |++.+... .+|||.+.++.. +++...++ | .-.+|++.|-++.+|+...++++..+
T Consensus 413 ~~lv~~l~~a~~~~~G~~~~~~~-----~gggtDa~~~~~--~v~~G~~f-Pg~~~~~H~~dE~v~i~~l~~~~~i~~~~ 484 (492)
T 3khx_A 413 DPFVQKLVTAYRNQTNDMTEPYT-----IGGGTYARNLDK--GVAFGAMF-SDSEDLMHQKNEYITKKQLFNATSIYLEA 484 (492)
T ss_dssp CHHHHHHHHHHHTTCC-------------------------------------------CCSCEEEHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCCeEEe-----eehhHHHHHhhC--ceEECCcC-CCCCCCCCCCccCcCHHHHHHHHHHHHHH
Confidence 44555555555554 55544432 367777766653 56655554 5 35799999999999999999999999
Q ss_pred Hhhcc
Q 012182 455 YESFS 459 (469)
Q Consensus 455 ~~~~~ 459 (469)
+..+.
T Consensus 485 l~~l~ 489 (492)
T 3khx_A 485 IYSLC 489 (492)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98764
No 58
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=87.60 E-value=0.62 Score=48.11 Aligned_cols=52 Identities=15% Similarity=0.043 Sum_probs=38.9
Q ss_pred Cceeeecc-ccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCccccc
Q 012182 244 NEFIFSGR-LDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 298 (469)
Q Consensus 244 ~e~I~~~~-lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~ 298 (469)
++++.|++ .||+.++.++|++++.+.+.. ......+.++|+..||+|+.|+.
T Consensus 126 ~g~l~grGa~D~K~g~a~~l~a~~~l~~~~---~~~~~~v~~~~~~~EE~g~~Ga~ 178 (479)
T 2zog_A 126 EGKLYGRGSTDDKGPVAGWMNALEAYQKTG---QEIPVNLRFCLEGMEESGSEGLD 178 (479)
T ss_dssp TTEEESTTTTTTHHHHHHHHHHHHHHHHTT---CCCSSEEEEEEESCGGGTCTTHH
T ss_pred CCEEEeeccccChHHHHHHHHHHHHHHHhC---CCCCCcEEEEEecccccCCccHH
Confidence 35677777 999999999999888765321 01345678899999999987764
No 59
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=86.74 E-value=0.48 Score=48.05 Aligned_cols=77 Identities=14% Similarity=0.001 Sum_probs=53.9
Q ss_pred cCHHHHHHHHHHHHHC--CCCEeEEEeecCCCCCCChHHHHhcCCCCcEE--Eechhh-ccccchhhhcCHHHHHHHHHH
Q 012182 376 TSGVTAFLFKEIAKLH--NLPTQEFVVRNDMGCGSTIGPILASGVGIRTV--DCGIAQ-LSMHSVREICGTEDIDIAYRH 450 (469)
Q Consensus 376 t~~~~~~~l~~ia~~~--~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~ti--dIGiP~-r~MHS~~E~~~~~Dv~~~~~l 450 (469)
.|+.+.+.+++.+++. |.+... ..+|||.+.+.+. .+|++ -+|... ..+|++.|-++.+++...+++
T Consensus 320 ~~~~l~~~~~~~~~~~g~g~~~~~------~~~g~tD~~~~~~--~~p~~~~~~G~~~~~~~H~~~E~v~~~~l~~~~~~ 391 (404)
T 1ysj_A 320 NDGTFLNAASEAAARLGYQTVHAE------QSPGGEDFALYQE--KIPGFFVWMGTNGTEEWHHPAFTLDEEALTVASQY 391 (404)
T ss_dssp ECGGGHHHHHHHHHHTTCEEEECC------CBSSCCTHHHHHT--TSCEEEEEEECCCSSCTTCTTCCCCTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCccccc------cCCccchHHHHHH--HCCeEEEEEcCCCCCCCCCCCCcCCHHHHHHHHHH
Confidence 3455667777777776 432221 2357776666654 28876 456544 458999999999999999999
Q ss_pred HHHHHhhccc
Q 012182 451 FKAFYESFSS 460 (469)
Q Consensus 451 l~af~~~~~~ 460 (469)
+..++..+-.
T Consensus 392 ~~~~~~~~~~ 401 (404)
T 1ysj_A 392 FAELAVIVLE 401 (404)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999877643
No 60
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=85.58 E-value=0.76 Score=48.10 Aligned_cols=52 Identities=12% Similarity=-0.019 Sum_probs=38.0
Q ss_pred Cceeeecc-ccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCccccc
Q 012182 244 NEFIFSGR-LDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 298 (469)
Q Consensus 244 ~e~I~~~~-lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~ 298 (469)
++++.|++ .||..++.+++.|++.+++... .....+.++|+..||+|+.|+.
T Consensus 128 ~g~l~GrG~~D~Kg~~a~~l~a~~~l~~~~~---~~~~~i~~~~~~~EE~g~~g~~ 180 (492)
T 3khx_A 128 EDAIIARGTLDDKGPTIAAYYAIKILEDMNV---DWKKRIHMIIGTDEESDWKCTD 180 (492)
T ss_dssp SSEEESTTTTTTHHHHHHHHHHHHHHHHTTC---CCSSEEEEEEECCTTCCCCTTS
T ss_pred CCEEEecCCccCcHHHHHHHHHHHHHHHcCC---CCCCCEEEEEECCccCCCcCHH
Confidence 35677765 5999999999998887753210 1344677999999999997654
No 61
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=85.52 E-value=0.74 Score=47.44 Aligned_cols=74 Identities=19% Similarity=0.256 Sum_probs=54.9
Q ss_pred CHHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEech--h--hccccchhhhcCHHHHHHHHHHH
Q 012182 377 SGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGI--A--QLSMHSVREICGTEDIDIAYRHF 451 (469)
Q Consensus 377 ~~~~~~~l~~ia~~-~~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tidIGi--P--~r~MHS~~E~~~~~Dv~~~~~ll 451 (469)
|..+...+++.+++ .|.+..... .+|+|.+.++. |++.+|+ | ...+|++.|-++.+|+...++++
T Consensus 388 d~~l~~~~~~a~~~~~g~~~~~~~-----~~g~~d~~~~~-----~~v~~G~~~pg~~~~~H~~~E~i~~~~l~~~~~~~ 457 (470)
T 1lfw_A 388 SDPMVQTLLKVYEKQTGKPGHEVV-----IGGGTYGRLFE-----RGVAFGAQPENGPMVMHAANEFMMLDDLILSIAIY 457 (470)
T ss_dssp TCHHHHHHHHHHHHHHCCCCCEEE-----ESSCCGGGGST-----TCEECCEECTTCCCCTTSTTCEEEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCCceee-----ecCHhHHHhCC-----CeEEECCCCCCCCCCCCCCCcceEHHHHHHHHHHH
Confidence 56677888888877 576554333 25778665543 5677776 3 35689999999999999999999
Q ss_pred HHHHhhccc
Q 012182 452 KAFYESFSS 460 (469)
Q Consensus 452 ~af~~~~~~ 460 (469)
..++..+..
T Consensus 458 ~~~~~~l~~ 466 (470)
T 1lfw_A 458 AEAIYELTK 466 (470)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHhc
Confidence 999887654
No 62
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=85.49 E-value=0.93 Score=46.13 Aligned_cols=79 Identities=14% Similarity=-0.028 Sum_probs=56.4
Q ss_pred cCHHHHHHHHHHHHH-CCCCE-eEEEeecCCCCCCChHHHHhcCCCCcEEE--echh-----hccccchhhhcCHHHHHH
Q 012182 376 TSGVTAFLFKEIAKL-HNLPT-QEFVVRNDMGCGSTIGPILASGVGIRTVD--CGIA-----QLSMHSVREICGTEDIDI 446 (469)
Q Consensus 376 t~~~~~~~l~~ia~~-~~Ip~-Q~~v~r~D~~gGgTig~i~~s~~Gi~tid--IGiP-----~r~MHS~~E~~~~~Dv~~ 446 (469)
.|..+.+.+++.+++ .|.+. .... ..+|||.+.+.+. .+|++- +|.. .-.+|++.|-++.+++..
T Consensus 316 ~d~~l~~~~~~~~~~~~g~~~~~~~~----~~~g~tD~~~~~~--~~P~~~~~~G~~~~~~~~~~~H~~~E~i~~~~l~~ 389 (418)
T 1xmb_A 316 NNKDLYKQFKKVVRDLLGQEAFVEAA----PVMGSEDFSYFAE--TIPGHFSLLGMQDETNGYASSHSPLYRINEDVLPY 389 (418)
T ss_dssp ECHHHHHHHHHHHHHHHCGGGEEECC----CBCCCCTHHHHHT--TSCEEEEEEEEECTTCCSCCTTCTTCCCCGGGHHH
T ss_pred CCHHHHHHHHHHHHHhcCCcceeccC----CCCCcchHHHHHH--HCCEEEEEEeCCCCCCCCCCCCCCCCccCHHHHHH
Confidence 477788888888888 57652 1111 1357776666554 389854 4542 256899999999999999
Q ss_pred HHHHHHHHHhhccc
Q 012182 447 AYRHFKAFYESFSS 460 (469)
Q Consensus 447 ~~~ll~af~~~~~~ 460 (469)
.++++..++..+..
T Consensus 390 ~~~~~~~~~~~l~~ 403 (418)
T 1xmb_A 390 GAAIHASMAVQYLK 403 (418)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999998876643
No 63
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=85.38 E-value=0.45 Score=49.10 Aligned_cols=52 Identities=13% Similarity=-0.008 Sum_probs=37.8
Q ss_pred Cceeeecc-ccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCccccc
Q 012182 244 NEFIFSGR-LDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 298 (469)
Q Consensus 244 ~e~I~~~~-lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~ 298 (469)
++++.|.+ .||..++.++|.|+..+.+... .....+.++|+..||+|+.|+.
T Consensus 109 ~g~l~grG~~D~K~~~a~~l~a~~~l~~~~~---~~~~~i~~i~~~~EE~g~~G~~ 161 (470)
T 1lfw_A 109 EGRIYGRGSADDKGPSLTAYYGMLLLKEAGF---KPKKKIDFVLGTNEETNWVGID 161 (470)
T ss_dssp TCEEESTTSSSSHHHHHHHHHHHHHHHHHTC---CCSSEEEEEEESCTTTTCHHHH
T ss_pred CCEEECCCcccChHHHHHHHHHHHHHHHcCC---CCCCCEEEEEecCcccCCccHH
Confidence 34667766 9999999999998887643110 1345678999999999976554
No 64
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=84.13 E-value=0.63 Score=48.34 Aligned_cols=51 Identities=20% Similarity=0.141 Sum_probs=37.3
Q ss_pred Cceeeeccc-cchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCccccc
Q 012182 244 NEFIFSGRL-DNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 298 (469)
Q Consensus 244 ~e~I~~~~l-Dnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~ 298 (469)
++++.|++- ||+.+++++|.|+..+.+.. .....+.++|...||+|+.|+.
T Consensus 120 ~g~~~grG~~D~K~~~a~~l~a~~~l~~~~----~~~~~v~~~~~~~EE~g~~g~~ 171 (472)
T 3pfe_A 120 NGLLYGRGGADDGYSAYASLTAIRALEQQG----LPYPRCILIIEACEESGSYDLP 171 (472)
T ss_dssp TTEEESTTCCCCCHHHHHHHHHHHHHHHTT----CCCEEEEEEEESCGGGTSTTHH
T ss_pred CCEEEEeCcccCcHHHHHHHHHHHHHHHcC----CCCCcEEEEEEeCCCCCChhHH
Confidence 346777776 99999999998887764321 1122577899999999987654
No 65
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=83.59 E-value=1.3 Score=46.11 Aligned_cols=78 Identities=12% Similarity=0.044 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHH-CCCCEeEEEeecCCCCCCCh-HHHHhcCCCCcEEEechh--hccccchhhhcCHHHHHHHHHHHHHH
Q 012182 379 VTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTI-GPILASGVGIRTVDCGIA--QLSMHSVREICGTEDIDIAYRHFKAF 454 (469)
Q Consensus 379 ~~~~~l~~ia~~-~~Ip~Q~~v~r~D~~gGgTi-g~i~~s~~Gi~tidIGiP--~r~MHS~~E~~~~~Dv~~~~~ll~af 454 (469)
.+.+.+++.+++ .|.+..... .+||.. +.+.....|++.+-+|+. --..|++.|-++.+|+...++++..+
T Consensus 403 ~~~~~~~~a~~~~~G~~~~~~~-----~ggs~Dfa~~~~~~~p~~~i~~g~g~~~~~~H~p~E~i~~~~l~~g~~~l~~~ 477 (485)
T 3dlj_A 403 TQYLAAKRAIRTVFGTEPDMIR-----DGSTIPIAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWNYIEGTKLFAAF 477 (485)
T ss_dssp HHHHHHHHHHHHHHSSCCEEEE-----ESSCCHHHHHHHHHTC--CEECCCBCTTCCTTSTTCEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCceecC-----CCCchhHHHHHHHHhCCCEEEecCCCCCCCCcCCCCCccHHHHHHHHHHHHHH
Confidence 567777777776 577654422 245554 444444478888877763 34689999999999999999999999
Q ss_pred Hhhcccc
Q 012182 455 YESFSSI 461 (469)
Q Consensus 455 ~~~~~~~ 461 (469)
+..+.++
T Consensus 478 l~~la~~ 484 (485)
T 3dlj_A 478 FLEMAQL 484 (485)
T ss_dssp HHHHHTC
T ss_pred HHHHhhc
Confidence 9887653
No 66
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=83.52 E-value=0.8 Score=47.64 Aligned_cols=51 Identities=14% Similarity=0.028 Sum_probs=36.9
Q ss_pred ceeeeccc-cchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCccccc
Q 012182 245 EFIFSGRL-DNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 298 (469)
Q Consensus 245 e~I~~~~l-Dnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~ 298 (469)
+++.|.+- ||+.++.++|.|++.+.+... .....+.++|+..||+|+.|+.
T Consensus 134 g~l~grG~~D~k~~~a~~l~a~~~l~~~~~---~~~~~v~~~~~~~EE~g~~g~~ 185 (485)
T 3dlj_A 134 GKLYGRGATDNKGPVLAWINAVSAFRALEQ---DLPVNIKFIIEGMEEAGSVALE 185 (485)
T ss_dssp TEEESTTTTTTHHHHHHHHHHHHHHHHTTC---CCSSEEEEEEESCGGGTTTTHH
T ss_pred CEEEecccccCcHHHHHHHHHHHHHHHhCC---CCCccEEEEEEcccccCCccHH
Confidence 45666655 999999999988887643210 1345677999999999987654
No 67
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=81.84 E-value=0.43 Score=47.73 Aligned_cols=52 Identities=15% Similarity=0.156 Sum_probs=36.5
Q ss_pred Cceeeeccc-cchhcHHHHHHHHHHcCCCCCCCCCC---Cce--EEEEEEeccccC-ccccc
Q 012182 244 NEFIFSGRL-DNLASSYCGLRALIDSCVSPSNLSSE---HAI--RMVALFDNEEVG-SDSYQ 298 (469)
Q Consensus 244 ~e~I~~~~l-Dnr~g~~~~leal~~~~~~~~~~~~~---~~~--~~~v~~dqEEVG-srga~ 298 (469)
++++.|++. |++.++.+++++++.+.+.. + .. ... +.++|+.+||+| ..|+.
T Consensus 90 ~g~~~grG~~D~k~~~a~~l~a~~~l~~~~--~-~~~~~~g~~~v~~~~~~~EE~~g~~G~~ 148 (364)
T 2rb7_A 90 NDRLYGRGANDDKYAVALGLVMFRDRLNAL--K-AAGRSQKDMALGLLITGDEEIGGMNGAA 148 (364)
T ss_dssp TTEEESTTTTTTHHHHHHHHHHHHHHHHHH--H-HTTCCGGGCCEEEEEESCGGGTSTTTHH
T ss_pred CCEEEecccccccHHHHHHHHHHHHHHHhC--C-CCcccCCCccEEEEEEeccccCchhhHH
Confidence 356778876 99999999999988764310 0 11 225 789999999984 45544
No 68
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=78.91 E-value=1.3 Score=43.70 Aligned_cols=52 Identities=12% Similarity=0.093 Sum_probs=36.4
Q ss_pred Cceeeeccc-cchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCc-cccc
Q 012182 244 NEFIFSGRL-DNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGS-DSYQ 298 (469)
Q Consensus 244 ~e~I~~~~l-Dnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGs-rga~ 298 (469)
++++.|.+. |++.++.+++.++..+.... ......+.++|+..||+|+ .|+.
T Consensus 90 ~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~---~~~~~~v~~~~~~~EE~~~~~G~~ 143 (377)
T 3isz_A 90 DGMLYGRGAADMKGSLAAMIVAAEEYVKAN---PNHKGTIALLITSDEEATAKDGTI 143 (377)
T ss_dssp TTEEESTTTTTTHHHHHHHHHHHHHHHHHC---TTCSSEEEEEEESCSSSCCSSSHH
T ss_pred CCEEEeCChhhhhHHHHHHHHHHHHHHHhC---CCCCceEEEEEEcccccCccccHH
Confidence 346777777 99999999988776653210 0134567889999999986 4554
No 69
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=78.34 E-value=2.1 Score=43.23 Aligned_cols=76 Identities=18% Similarity=0.096 Sum_probs=53.9
Q ss_pred cCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEechhh----ccccchhhh-------cCHHHH
Q 012182 376 TSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQ----LSMHSVREI-------CGTEDI 444 (469)
Q Consensus 376 t~~~~~~~l~~ia~~~~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tidIGiP~----r~MHS~~E~-------~~~~Dv 444 (469)
.|+.+.+.+++.+++.|.++... ...+|||+..+.+ .++|++.+.+++ -..||+ |. ++.+++
T Consensus 286 ~d~~l~~~~~~a~~~~G~~~~~~----~~~~g~~D~~~~~--~~~P~~~~~~g~~~~~~~~H~~-ef~~~~~~~~~~~~l 358 (394)
T 3ram_A 286 KTPKLDDLFAKYAEEVGEAVIDD----DFGYGSTDTGNVS--HVVPTIHPHIKIGSRNLVGHTH-RFREAAASVHGDEAL 358 (394)
T ss_dssp CCHHHHHHHHHHHHHTTCCBCCS----CCCCBCCTHHHHT--TTSCBCCCEEECSCTTCCTTSH-HHHHHTTSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcccccC----CCCcccccHHHHH--HHhchheEEeeecCCCCCCCCH-HHHhccCCCccHHHH
Confidence 47888999999999988444111 1246777766665 469998775444 368999 66 488899
Q ss_pred HHHHHHHHHHHhhc
Q 012182 445 DIAYRHFKAFYESF 458 (469)
Q Consensus 445 ~~~~~ll~af~~~~ 458 (469)
...++++..++..+
T Consensus 359 ~~g~~~la~~~~~~ 372 (394)
T 3ram_A 359 IKGAKIMALMGLEL 372 (394)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99888888777654
No 70
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=78.01 E-value=1.4 Score=44.19 Aligned_cols=52 Identities=13% Similarity=0.080 Sum_probs=36.1
Q ss_pred Cceeeeccc-cchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccC-ccccc
Q 012182 244 NEFIFSGRL-DNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVG-SDSYQ 298 (469)
Q Consensus 244 ~e~I~~~~l-Dnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVG-srga~ 298 (469)
++++.|++- |++.++.+++.++..+.+.. ......+.++|+..||+| ..|+.
T Consensus 93 ~g~l~grG~~D~k~~~aa~l~a~~~l~~~~---~~~~~~v~~~~~~~EE~~~~~Ga~ 146 (393)
T 1vgy_A 93 DGRLYGRGAADMKTSIACFVTACERFVAKH---PNHQGSIALLITSDEEGDALDGTT 146 (393)
T ss_dssp TTEEESTTTTTTHHHHHHHHHHHHHHHHHC---TTCSSEEEEEEESCSSSCCTTSHH
T ss_pred CCEEEecCcccchHHHHHHHHHHHHHHHhc---CCCCCcEEEEEEeccccCCcCCHH
Confidence 356777777 99999999888877654210 013456789999999986 35544
No 71
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=77.72 E-value=1.4 Score=43.95 Aligned_cols=43 Identities=12% Similarity=0.032 Sum_probs=32.9
Q ss_pred eeee-ccccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEecccc-Cccccc
Q 012182 246 FIFS-GRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEV-GSDSYQ 298 (469)
Q Consensus 246 ~I~~-~~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEV-Gsrga~ 298 (469)
.+.| ...||+.++.+++++++.. ...+.++|+..||+ |+.|+.
T Consensus 98 ~l~grG~~D~k~g~a~~l~a~~~~----------~~~v~~~~~~~EE~~g~~G~~ 142 (369)
T 2f7v_A 98 RVIGLGVCDIKGAAAALVAAANAG----------DGDAAFLFSSDEEANDPRCIA 142 (369)
T ss_dssp EEECTTTTTTHHHHHHHHHHHTTC----------CCCEEEEEESCTTSSSCCHHH
T ss_pred EEEecccccccHHHHHHHHHHhcC----------CCCEEEEEEeCcccCCCcCHH
Confidence 3444 4689999999999988652 23478999999999 777765
No 72
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=73.91 E-value=2.5 Score=41.95 Aligned_cols=52 Identities=21% Similarity=0.211 Sum_probs=40.9
Q ss_pred Cceeeeccc-cchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEecccc-Cccccccc
Q 012182 244 NEFIFSGRL-DNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEV-GSDSYQGA 300 (469)
Q Consensus 244 ~e~I~~~~l-Dnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEV-Gsrga~gA 300 (469)
++++.|.+. ||+.++.+++++++.+.+. .....+.++|+..||+ |++|+...
T Consensus 95 ~g~~~g~G~~D~k~g~a~~l~a~~~l~~~-----~~~~~v~~~~~~~EE~~g~~G~~~~ 148 (356)
T 3ct9_A 95 NGKLYGLGSNDAGASVVSLLQVFLQLCRT-----SQNYNLIYLASCEEEVSGKEGIESV 148 (356)
T ss_dssp SSEEESTTTTTTHHHHHHHHHHHHHHTTS-----CCSSEEEEEEECCGGGTCTTTHHHH
T ss_pred CCEEEecCcccchHHHHHHHHHHHHHHhc-----CCCCCEEEEEEeCcccCCccCHHHH
Confidence 456777777 9999999999999988653 1345678999999999 88887643
No 73
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=67.85 E-value=2.4 Score=43.10 Aligned_cols=48 Identities=13% Similarity=-0.053 Sum_probs=33.3
Q ss_pred ceeeeccccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCccccc
Q 012182 245 EFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 298 (469)
Q Consensus 245 e~I~~~~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~ 298 (469)
+++.|.+.| .++.+++.+++.+++.. ......+.++|+..|| |+.|+.
T Consensus 111 g~~~g~G~d--~~~a~~l~a~~~l~~~~---~~~~~~v~~~~~~~EE-g~~G~~ 158 (418)
T 1xmb_A 111 GKMHACGHD--GHVTMLLGAAKILHEHR---HHLQGTVVLIFQPAEE-GLSGAK 158 (418)
T ss_dssp TCBCCSSHH--HHHHHHHHHHHHHHHTG---GGCSSEEEEEEECCTT-TTCHHH
T ss_pred CceEeCCch--HHHHHHHHHHHHHHhcc---ccCCceEEEEEecccc-ccccHH
Confidence 456677776 78888888887664320 0134567899999999 987765
No 74
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=64.36 E-value=6.4 Score=40.33 Aligned_cols=84 Identities=14% Similarity=0.033 Sum_probs=47.5
Q ss_pred ccCHHHHHHHHHHHHHC-CCCEeEEEeecCCCCCCChHHHHhcCC---CCcE--EEechh-hccccchhhhcCHHHHHHH
Q 012182 375 ATSGVTAFLFKEIAKLH-NLPTQEFVVRNDMGCGSTIGPILASGV---GIRT--VDCGIA-QLSMHSVREICGTEDIDIA 447 (469)
Q Consensus 375 ~t~~~~~~~l~~ia~~~-~Ip~Q~~v~r~D~~gGgTig~i~~s~~---Gi~t--idIGiP-~r~MHS~~E~~~~~Dv~~~ 447 (469)
..|+.+.+.+++.+++. |.+..... ....+|||.+.+.+... |.|+ +-+|.. .-.+|++.|-++.+++...
T Consensus 343 ~~d~~l~~~~~~a~~~~~g~~~v~~~--~~~~~g~~D~~~~~~~~P~~gg~~~~~~~G~~~~~~~H~~~E~i~~~~l~~g 420 (445)
T 3io1_A 343 APSPAWVDYLREQAARVPGVQQAVDR--IAAPAGSEDATLMMARVQARGGLASYMIFGTELSAGHHNEKFDFDESVMAVA 420 (445)
T ss_dssp CCCHHHHHHHHHHHHHSTTCCBCBSS--CCCCCBCCTHHHHHHHHHHTTCEEEEEEEEEEC-----------CCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCccceec--CCCCccHHHHHHHHHHhcccCCceEEEEEeCCCCCCCCCCCCcCCHHHHHHH
Confidence 35788889999999887 56431100 01126777665554321 2333 556653 2468999999999999999
Q ss_pred HHHHHHHHhhccc
Q 012182 448 YRHFKAFYESFSS 460 (469)
Q Consensus 448 ~~ll~af~~~~~~ 460 (469)
++++..++..+-.
T Consensus 421 ~~~~~~~~~~~~~ 433 (445)
T 3io1_A 421 VETLARVALNFPW 433 (445)
T ss_dssp HHHHHHHHHTCCS
T ss_pred HHHHHHHHHHHhh
Confidence 9999999887643
No 75
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=62.02 E-value=4.5 Score=40.77 Aligned_cols=48 Identities=17% Similarity=0.116 Sum_probs=33.8
Q ss_pred cccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEecccc-----CcccccccC
Q 012182 251 RLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEV-----GSDSYQGAG 301 (469)
Q Consensus 251 ~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEV-----Gsrga~gA~ 301 (469)
.+|++.|+.+++++++.+.+... .....+.++|+..||. |+.|++...
T Consensus 88 ~~d~~~g~a~~l~~~~~l~~~~~---~~~~~i~~~~~~~EE~~~~~~g~~Gs~~~~ 140 (408)
T 3n5f_A 88 CFDGPLGVLAGVEVVQTMNEHGV---VTHHPIEVVAFTDEEGARFRFGMIGSRAMA 140 (408)
T ss_dssp SSTTHHHHHHHHHHHHHHHHTTC---CCSSCEEEEEESCSSCTTTTCCCHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHcCC---CCCCCEEEEEEcCccccccCCCCcCHHHHH
Confidence 46999999999998887653211 1345678999999996 455655443
No 76
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=60.52 E-value=38 Score=35.05 Aligned_cols=154 Identities=10% Similarity=-0.033 Sum_probs=85.9
Q ss_pred cccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCcchHHHHHHHHhcccccCCchhhhhhhc
Q 012182 251 RLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTI 330 (469)
Q Consensus 251 ~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~gA~s~~~~dil~ri~~~~~~~~~~~~~~~~~~ 330 (469)
|=||..|++++++..+.++.. ....+..++|++ |.+||. .++. + ......
T Consensus 194 ANDNaSG~a~lleLar~l~~~-----~~~~t~rFvf~p-g~iGS~-------~yl~----~----------~~~~l~--- 243 (435)
T 3k9t_A 194 CNDNLSGVALITFIAKALSKL-----KTKYSYRFLFAP-ETIGSI-------TWLS----R----------NEDKLK--- 243 (435)
T ss_dssp TTTTHHHHHHHHHHHHHHTTS-----CCSSEEEEEEEC-TTHHHH-------HHHH----H----------CGGGGG---
T ss_pred CCccchHHHHHHHHHHHHhcC-----CCCceEEEEEcC-ccHHHH-------HHHH----h----------ChHhhh---
Confidence 779999999999988877643 133344466665 766665 1111 0 000110
Q ss_pred cCceEEEEecCCCCCCCCCccccCCCCCcCCCCceEEEcCCCCcccCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCCh
Q 012182 331 RQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTI 410 (469)
Q Consensus 331 ~~s~~IS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~v~r~D~~gGgTi 410 (469)
+--..|.+||.-... ...++.... .|...-..++.+++..+-+++..... +.|++=
T Consensus 244 ~i~a~lnLDmVGd~~-----------------~~~y~~sr~----g~~~~d~~~~~vl~~~~~~~~~~~f~---~~GSDh 299 (435)
T 3k9t_A 244 NIKMGLVATCVGDAG-----------------IKNYKRTKF----GDAEIDKIVEKVLMHCGSEYYVADFF---PWGSDE 299 (435)
T ss_dssp GEEEEEECCSCCSSS-----------------CEEEECCTT----SSSHHHHHHHHHHHHSSSCEEEECCC---SCSSTH
T ss_pred ceEEEEEEEEecCCC-----------------CceeecCCC----CChHHHHHHHHHHhhcCCCCceecCC---CCCCcc
Confidence 112368888754321 222332111 12223344555666667777764432 367777
Q ss_pred HHHHhcCCCCcEEEech---hhccccchhhh---cCHHHHHHHHHHHHHHHhhc
Q 012182 411 GPILASGVGIRTVDCGI---AQLSMHSVREI---CGTEDIDIAYRHFKAFYESF 458 (469)
Q Consensus 411 g~i~~s~~Gi~tidIGi---P~r~MHS~~E~---~~~~Dv~~~~~ll~af~~~~ 458 (469)
.++.+.+..||++.+.- |-.+.|++.-. ++.+=++.+.+++.+.++.+
T Consensus 300 ~qF~spG~dIPv~~~~r~~~~~peYHTs~Dtld~ISpe~L~~s~~iv~~~i~~L 353 (435)
T 3k9t_A 300 RQFSSPGINLSVGSLMRSCYGFDGYHTSADNLCYMNKDGLADSYKTYLEVIYTI 353 (435)
T ss_dssp HHHTSTTTCCCEEEEESSCTTCTTTTBTTSSGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred hhHhhCCCCCCEEEEecCCCCCcccCCCcCChhhCCHHHHHHHHHHHHHHHHHh
Confidence 77777655599998874 33369998755 45555555555555555544
No 77
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=33.26 E-value=15 Score=37.86 Aligned_cols=47 Identities=15% Similarity=0.003 Sum_probs=32.1
Q ss_pred cchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEecccc-----CcccccccCC
Q 012182 253 DNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEV-----GSDSYQGAGA 302 (469)
Q Consensus 253 Dnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEV-----Gsrga~gA~s 302 (469)
|+..++.++|.+++.+.+... .....+.++|+..||+ |+.|+.....
T Consensus 124 D~k~gvaa~L~a~~~L~~~~~---~~~~~v~lif~~dEE~~~~~~g~~Gs~~l~~ 175 (474)
T 2v8h_A 124 DGILGVLAGLEVLRTFKDNNY---VPNYDVCVVVWFNAEGARFARSCTGSSVWSH 175 (474)
T ss_dssp TTHHHHHHHHHHHHHHHHHTC---CCSSCEEEEECTTCSCSSSSCTTHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHcCC---CCCCCEEEEEECCccCCCCCCCcccHHHHHh
Confidence 888999999988876642110 1244678999999998 4555554433
No 78
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=26.72 E-value=23 Score=35.53 Aligned_cols=40 Identities=15% Similarity=-0.033 Sum_probs=28.3
Q ss_pred ccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCc
Q 012182 252 LDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGS 294 (469)
Q Consensus 252 lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGs 294 (469)
.|+..++.++|.+++.+++.. ......+.++|+..||+|.
T Consensus 93 ~D~k~g~a~~l~a~~~l~~~~---~~~~~~v~~i~~~~EE~~~ 132 (423)
T 1z2l_A 93 LDGQFGALAAWLAIDWLKTQY---GAPLRTVEVVAMAEEEGSR 132 (423)
T ss_dssp STTHHHHHHHHHHHHHHHHHH---CSCSEEEEEEEESCSSCCS
T ss_pred cCCHHHHHHHHHHHHHHHHcC---CCCCCCEEEEEEcCccccc
Confidence 588999999998877664210 0134467789999999853
No 79
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=23.58 E-value=42 Score=33.52 Aligned_cols=47 Identities=6% Similarity=-0.065 Sum_probs=29.3
Q ss_pred eeeeccccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCccccc
Q 012182 246 FIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 298 (469)
Q Consensus 246 ~I~~~~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~ 298 (469)
.+.|.+.| .++.+++.+++.+.+.. ......+.++|+..||+ +.|+.
T Consensus 118 ~l~g~G~k--g~~a~~l~a~~~l~~~~---~~~~~~v~~~~~~~EE~-~~G~~ 164 (404)
T 1ysj_A 118 TMHACGHD--FHTASIIGTAMLLNQRR---AELKGTVRFIFQPAEEI-AAGAR 164 (404)
T ss_dssp CBCTTSHH--HHHHHHHHHHHHHHTCG---GGCSSEEEEEEESCTTT-TCHHH
T ss_pred ceEcCcCh--HHHHHHHHHHHHHHhcc---ccCCceEEEEEeccccc-chhHH
Confidence 34555554 67777777777664320 01345678999999998 44433
No 80
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=20.70 E-value=3.3e+02 Score=21.88 Aligned_cols=66 Identities=14% Similarity=-0.007 Sum_probs=41.4
Q ss_pred CCCcccCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEechhhccc---------cchhhhcCH
Q 012182 371 NQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSM---------HSVREICGT 441 (469)
Q Consensus 371 ~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tidIGiP~r~M---------HS~~E~~~~ 441 (469)
+..+.|+ -+...+++.+++.||+++..... -+.+.... .+...+.+|..++|+ .-|..+++.
T Consensus 11 g~G~sTS-~l~~k~~~~~~~~gi~~~i~a~~-----~~~~~~~~---~~~Dvil~~pqv~~~~~~~~~~~~~~~v~vI~~ 81 (106)
T 1e2b_A 11 SAGMSTS-LLVSKMRAQAEKYEVPVIIEAFP-----ETLAGEKG---QNADVVLLGPQIAYMLPEIQRLLPNKPVEVIDS 81 (106)
T ss_dssp SSSTTTH-HHHHHHHHHHHHSCCSEEEEEEC-----SSSTTHHH---HHCSEEEECTTSGGGHHHHHHHSSSSCCCBCCH
T ss_pred CCchhHH-HHHHHHHHHHHHCCCCeEEEEec-----HHHHHhhc---cCCCEEEEccchhhhHHHHHHHhcCCCceEECH
Confidence 3334444 78889999999999999877642 12222222 123577777777765 336666776
Q ss_pred HHHH
Q 012182 442 EDID 445 (469)
Q Consensus 442 ~Dv~ 445 (469)
.|+-
T Consensus 82 ~~yg 85 (106)
T 1e2b_A 82 LLYG 85 (106)
T ss_dssp HHHT
T ss_pred HHcc
Confidence 6653
Done!